BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011027
(495 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255572664|ref|XP_002527265.1| fad oxidoreductase, putative [Ricinus communis]
gi|223533358|gb|EEF35109.1| fad oxidoreductase, putative [Ricinus communis]
Length = 489
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 308/467 (65%), Positives = 370/467 (79%), Gaps = 19/467 (4%)
Query: 39 FKSSFFGKK----PLSLSVNKTRPGRALGPTGYSRLNP-ITASSRCHTFDVIIIGAGIIG 93
K++FFG K P+S+S++ + R P ITAS+ HTFDV+I+GAGIIG
Sbjct: 32 IKTTFFGSKLPAKPISISLSHYNAPKL-------RREPLITAST--HTFDVVIVGAGIIG 82
Query: 94 LTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKML 153
L IARQ L+GS+LSVAVVDK VPCSGATGAGQGYIWM H++P S+ W+L +RS+KLWKML
Sbjct: 83 LAIARQFLIGSNLSVAVVDKAVPCSGATGAGQGYIWMAHKSPESDTWELTMRSHKLWKML 142
Query: 154 ADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQA 213
ADS+ DQGL+PL+V+GWK TGSLL+GRTPEE +LK+RV+QL EAGLR EYLSS DL
Sbjct: 143 ADSIHDQGLNPLEVLGWKMTGSLLVGRTPEESEVLKKRVQQLSEAGLRVEYLSSHDLHLQ 202
Query: 214 EPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST 273
EP + VGE AAFLP D QLDA VA+IEK NR+FA+KGRYAEFYHDPV LLRS+S+
Sbjct: 203 EPAIQVGESGGAAFLPDDCQLDAHRTVAFIEKANRYFATKGRYAEFYHDPVISLLRSSSS 262
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
GE+EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDL RE +IV +IPVKPRKGHLLVLE+F
Sbjct: 263 GEIEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLFREYDIVFNIPVKPRKGHLLVLESFG 322
Query: 334 SLKLNHASMEAGYVGHHDLTLH-----PGQVNHGQILSISMTATTDVIGNLVLGSSRQFA 388
SL LNH MEAGYV H ++ G +H + LS+SMTAT DV+GNLVLGSSR+F+
Sbjct: 323 SLTLNHGVMEAGYVDHQGAGVNCTSAVSGLFDHKKNLSVSMTATMDVMGNLVLGSSREFS 382
Query: 389 GFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGL 448
GF+T+ +++I+ IW RA EF+PKL+++ L D ++RK+RIGLRPYMPDGKPVIG +P
Sbjct: 383 GFSTQADESIVGHIWNRAGEFFPKLKEVYLGDLTASRKLRIGLRPYMPDGKPVIGSIPDF 442
Query: 449 SKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGRCC 495
V +ATGHEG GLSLALGTAE+VADMVL NP V+ APF+VQGRCC
Sbjct: 443 PNVLIATGHEGGGLSLALGTAEMVADMVLGNPGTVNYAPFSVQGRCC 489
>gi|449462437|ref|XP_004148947.1| PREDICTED: D-amino acid dehydrogenase small subunit-like [Cucumis
sativus]
Length = 490
Score = 596 bits (1536), Expect = e-168, Method: Compositional matrix adjust.
Identities = 290/437 (66%), Positives = 347/437 (79%), Gaps = 11/437 (2%)
Query: 64 PTGYSRLNPITASS------RCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPC 117
P + L + +SS FDV+IIGAGIIGLTIARQ L+GSDLSVAVVDK VPC
Sbjct: 59 PVSFCALKDVKSSSSPSRNGNASEFDVVIIGAGIIGLTIARQFLIGSDLSVAVVDKEVPC 118
Query: 118 SGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLL 177
SGATGAGQGY+WM H++PGS+IW+LALRS +LW+ LA+SLRDQGL+P + +GWK+TGSLL
Sbjct: 119 SGATGAGQGYLWMAHKSPGSDIWELALRSQRLWEGLAESLRDQGLNPSEELGWKKTGSLL 178
Query: 178 IGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAM 237
IGRTP+EL MLK +V Q AGL AEYLSS DLL EP L++G+ AAFLP D QLDA
Sbjct: 179 IGRTPDELDMLKRKVNQFSGAGLEAEYLSSVDLLSMEPALLIGDSCGAAFLPNDCQLDAY 238
Query: 238 LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAG 297
A+I+K NRHF KGRYAEF+HDPVT LLRS S G++EAVQTSK TLYSKKAIV+AAG
Sbjct: 239 STAAFIQKANRHF--KGRYAEFFHDPVTGLLRSGSNGKIEAVQTSKTTLYSKKAIVLAAG 296
Query: 298 CWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPG 357
CWSG+L+ DLLRE + VLD+P+ PRKGHLLV+ENFNSL +NH ME GYV H LTL
Sbjct: 297 CWSGTLLRDLLREGKTVLDVPIMPRKGHLLVIENFNSLHVNHGLMEVGYVNHQALTL--- 353
Query: 358 QVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLC 417
+ Q S+SMTAT DV GNL+LGSSR+FAGFNTE+ + I+ RIW+RA+EF+P L+++
Sbjct: 354 AKDFEQTSSVSMTATMDVQGNLILGSSREFAGFNTEINEFIVARIWERASEFFPTLKEVS 413
Query: 418 LADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
L+D + KVRIGLRPYM DGKPVIGPVPGLS VFLA+GHEG GLS+A+GTAE++ +MVL
Sbjct: 414 LSDIKHSSKVRIGLRPYMLDGKPVIGPVPGLSNVFLASGHEGGGLSMAMGTAEMIGNMVL 473
Query: 478 TNPLKVDSAPFAVQGRC 494
+P KVD APF VQGRC
Sbjct: 474 GSPGKVDPAPFLVQGRC 490
>gi|357504859|ref|XP_003622718.1| D-amino acid dehydrogenase small subunit [Medicago truncatula]
gi|355497733|gb|AES78936.1| D-amino acid dehydrogenase small subunit [Medicago truncatula]
Length = 469
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/430 (65%), Positives = 348/430 (80%), Gaps = 3/430 (0%)
Query: 64 PTGYSRLNPITASS--RCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGAT 121
P +R+ + +SS R FDV+I+GAGIIGLT+ARQ L+ SDLSVA+VDK +PCSGAT
Sbjct: 37 PATGNRMARLYSSSDDRAKVFDVVIVGAGIIGLTVARQFLMDSDLSVAIVDKGLPCSGAT 96
Query: 122 GAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRT 181
GAGQGY+WM H+TPGS WDL++RS++LW M+A++L++QGLDP+ +GWK+TGSLL+GRT
Sbjct: 97 GAGQGYLWMTHKTPGSATWDLSMRSHQLWTMMAENLQEQGLDPIVELGWKKTGSLLVGRT 156
Query: 182 PEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVA 241
E MLK RVKQL EAGL+AE+L SSDLL+ EP+L+V +D+ AAFLP D QLDA VA
Sbjct: 157 RAESDMLKGRVKQLSEAGLKAEFLGSSDLLKREPDLLVDKDTAAAFLPDDCQLDAHRTVA 216
Query: 242 YIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301
YIEKGNR+FASKGRYAEFY DPV C +RS+ G VEAVQTSKNTLYSKKA++VAAGCW+G
Sbjct: 217 YIEKGNRNFASKGRYAEFYDDPVKCFIRSDCNGGVEAVQTSKNTLYSKKAVIVAAGCWTG 276
Query: 302 SLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNH 361
SLM DL R + +PV+PRKGHLL L+NFNSL+LNH MEAGYV H ++ +H
Sbjct: 277 SLMQDLFRNWGMEFHVPVRPRKGHLLALQNFNSLQLNHGLMEAGYVDHPSIS-DLESSDH 335
Query: 362 GQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF 421
G+ LS+SMTAT D GNL++GSSR+FAGFNT++++++I IWKR +++PKLR L ++D
Sbjct: 336 GRDLSVSMTATIDAAGNLLVGSSREFAGFNTDLDESVITHIWKRVGDYFPKLRSLSVSDL 395
Query: 422 ISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPL 481
++RKVRIGLRPYMPDGKPVIGPV GLS V+LA GHEG GLS+ALGTAE+V D+VL P
Sbjct: 396 STSRKVRIGLRPYMPDGKPVIGPVSGLSNVYLAAGHEGGGLSMALGTAEMVVDVVLGRPG 455
Query: 482 KVDSAPFAVQ 491
KVDSAPFAV
Sbjct: 456 KVDSAPFAVD 465
>gi|449522095|ref|XP_004168063.1| PREDICTED: LOW QUALITY PROTEIN: D-amino acid dehydrogenase small
subunit-like [Cucumis sativus]
Length = 491
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 288/443 (65%), Positives = 345/443 (77%), Gaps = 12/443 (2%)
Query: 59 GRALGPTGYSRLNPITASS------RCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVD 112
G P + L + +SS FDV+IIGAGIIGLTIARQ L+GSDLSVAVVD
Sbjct: 54 GNRYRPVSFCALKDVKSSSSPSRNGNASEFDVVIIGAGIIGLTIARQFLIGSDLSVAVVD 113
Query: 113 KVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQ 172
K VPCSGATGAGQGY+WM H++PGS+IW+LALRS +LW+ LA+SLRDQGL+P + +GWK+
Sbjct: 114 KEVPCSGATGAGQGYLWMAHKSPGSDIWELALRSQRLWEGLAESLRDQGLNPSEELGWKK 173
Query: 173 TGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDS 232
TGSLLIGRTP+EL MLK +V Q AGL AEYLSS DLL EP L++G+ AAFLP D
Sbjct: 174 TGSLLIGRTPDELDMLKRKVNQFSGAGLEAEYLSSVDLLSMEPALLIGDSCGAAFLPNDC 233
Query: 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAI 292
QLDA A+I+K NRHF KGRYAEF+HDPVT LLRS S G++EAVQTSK TLYSKKAI
Sbjct: 234 QLDAYSTAAFIQKANRHF--KGRYAEFFHDPVTGLLRSGSNGKIEAVQTSKTTLYSKKAI 291
Query: 293 VVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDL 352
V+AAGCWSG+L+ DLLRE + VLD+P+ PRKGHLLV+ENFNSL +NH ME GYV H L
Sbjct: 292 VLAAGCWSGTLLRDLLREGKTVLDVPIMPRKGHLLVIENFNSLHVNHGLMEVGYVNHQAL 351
Query: 353 TLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPK 412
TL + Q S+SMTAT DV GNL+LGSSR+FAGFNTE+ + I+ RIW+RA+EF+P
Sbjct: 352 TL---AKDFEQTSSVSMTATMDVQGNLILGSSREFAGFNTEINEFIVARIWERASEFFPT 408
Query: 413 LRDLCLADFISNRKVRIGLRPYM-PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAEL 471
L+++ L+D + KVRIGLRPY KPVIGPVPGLS VFLA+GHEG GLS+A+GTAE+
Sbjct: 409 LKEVSLSDIKHSSKVRIGLRPYSNAXWKPVIGPVPGLSNVFLASGHEGGGLSMAMGTAEM 468
Query: 472 VADMVLTNPLKVDSAPFAVQGRC 494
+ +MVL +P KVD APF VQGRC
Sbjct: 469 IGNMVLGSPGKVDPAPFLVQGRC 491
>gi|388501610|gb|AFK38871.1| unknown [Medicago truncatula]
Length = 469
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 279/430 (64%), Positives = 346/430 (80%), Gaps = 3/430 (0%)
Query: 64 PTGYSRLNPITASS--RCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGAT 121
P +R+ + +SS R FDV+I+GAGIIGLT+ARQ L+ SDLSVA+VDK +PCSGAT
Sbjct: 37 PATGNRMARLYSSSDDRAKVFDVVIVGAGIIGLTVARQFLMDSDLSVAIVDKGLPCSGAT 96
Query: 122 GAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRT 181
GAGQGY+WM H+TPGS WDL++RS++LW M+A++L++QGLDP+ +GWK+TGSLL+GRT
Sbjct: 97 GAGQGYLWMTHKTPGSATWDLSMRSHQLWTMMAENLQEQGLDPIVELGWKKTGSLLVGRT 156
Query: 182 PEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVA 241
E MLK RVKQL EAGL+AE+L SSDLL+ EP+L+V +D+ AAFLP D QLDA VA
Sbjct: 157 RAESDMLKGRVKQLSEAGLKAEFLGSSDLLKREPDLLVDKDTAAAFLPDDCQLDAHRTVA 216
Query: 242 YIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301
YIEKGNR+FASKGRYAEFY DPV C +RS+ G VEAVQTSKNTLYSKKA++VAAGCW+G
Sbjct: 217 YIEKGNRNFASKGRYAEFYDDPVKCFIRSDCNGGVEAVQTSKNTLYSKKAVIVAAGCWTG 276
Query: 302 SLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNH 361
SLM DL R + +PV+PRKGHLL L+NFNSL+LNH MEAGYV H ++ +H
Sbjct: 277 SLMQDLFRNWGMEFHVPVRPRKGHLLALQNFNSLQLNHGLMEAGYVDHPSIS-DLESSDH 335
Query: 362 GQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF 421
G+ LS+SMTAT D GNL++GSSR+FAGFNT++++++I IWKR +++PKLR L ++D
Sbjct: 336 GRDLSVSMTATIDAAGNLLVGSSREFAGFNTDLDESVITHIWKRVGDYFPKLRSLSVSDL 395
Query: 422 ISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPL 481
++RKV IGLRPYMPDGKPVIGPV GLS V+LA GHEG GLS+ALGTAE+V D VL P
Sbjct: 396 STSRKVGIGLRPYMPDGKPVIGPVSGLSNVYLAAGHEGGGLSMALGTAEMVVDGVLGRPG 455
Query: 482 KVDSAPFAVQ 491
KVDSAPFAV
Sbjct: 456 KVDSAPFAVD 465
>gi|297795501|ref|XP_002865635.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
gi|297311470|gb|EFH41894.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
Length = 458
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 283/424 (66%), Positives = 337/424 (79%), Gaps = 4/424 (0%)
Query: 73 ITASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVH 132
+TAS ++DV+++G GIIGLTIARQ L GSDLSVAVVDK VPCSGATGAGQGYIWM H
Sbjct: 38 VTASRS--SYDVVVVGGGIIGLTIARQFLTGSDLSVAVVDKAVPCSGATGAGQGYIWMTH 95
Query: 133 RTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERV 192
+ PG+++WDL LRS++LW LA+SL GLDP +++GWK+TGSLLIGRT EE V LK++V
Sbjct: 96 KKPGTDVWDLTLRSHELWHKLAESLNVDGLDPEELLGWKKTGSLLIGRTSEECVALKQKV 155
Query: 193 KQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS 252
+L EAGLR EYLSS +LL EP ++V +DS AAFLP DSQLDA AVAYIEKGNR FA
Sbjct: 156 HELSEAGLRTEYLSSDELLLKEPAVLVDDDSGAAFLPDDSQLDAHRAVAYIEKGNREFAP 215
Query: 253 KGRYAEFYHDPVTCLLRSNS-TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET 311
+GRYAEFYH+PV L+RSN + EV VQTSK LY KKA +VAAGCWSGSLMH+LL++
Sbjct: 216 EGRYAEFYHEPVIGLIRSNGRSTEVAGVQTSKRNLYGKKATIVAAGCWSGSLMHELLKDC 275
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTA 371
I LD+PVKPRKGHLLV+ENF+S LNH MEAGY H + PG ++LSISMTA
Sbjct: 276 NISLDVPVKPRKGHLLVVENFDSFHLNHGLMEAGYTNHQSASA-PGLDVEERMLSISMTA 334
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
T D GNL+LGSSR+F GF+TE ++ II IW+RAAEF+PKLRD+ L DFI NRKVR+GL
Sbjct: 335 TMDTSGNLILGSSREFVGFDTEADEFIIRCIWERAAEFFPKLRDISLEDFIRNRKVRVGL 394
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
RPYMPDGKPVIG VPGL ++LA GHEG GLS+AL TAE+V DMVL P +VDS+ F V+
Sbjct: 395 RPYMPDGKPVIGSVPGLQNLYLAAGHEGGGLSMALATAEMVTDMVLGKPEQVDSSAFGVK 454
Query: 492 GRCC 495
GRCC
Sbjct: 455 GRCC 458
>gi|79531915|ref|NP_199655.3| FAD-dependent oxidoreductase [Arabidopsis thaliana]
gi|8777374|dbj|BAA96964.1| unnamed protein product [Arabidopsis thaliana]
gi|46518459|gb|AAS99711.1| At5g48440 [Arabidopsis thaliana]
gi|51969724|dbj|BAD43554.1| putative protein [Arabidopsis thaliana]
gi|332008287|gb|AED95670.1| FAD-dependent oxidoreductase [Arabidopsis thaliana]
Length = 459
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 280/425 (65%), Positives = 340/425 (80%), Gaps = 5/425 (1%)
Query: 73 ITASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVH 132
+TAS +FDV+++G GIIGLTIARQ L GSDLSVAVVDK VPCSGATGAGQGYIWM H
Sbjct: 38 VTASRS--SFDVVVVGGGIIGLTIARQFLTGSDLSVAVVDKAVPCSGATGAGQGYIWMTH 95
Query: 133 RTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERV 192
+ PGS++WDL LRS++LW LA+SL D GLDP +++GWK+TGSLLIGRT EE V LK++V
Sbjct: 96 KKPGSDVWDLTLRSHELWHKLAESLTDDGLDPEELLGWKKTGSLLIGRTTEECVALKQKV 155
Query: 193 KQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS 252
+L EAGLR EYLSS++LL EP ++V +++ AAFLP DSQLDA AVAYIEKGNR FA+
Sbjct: 156 HELSEAGLRTEYLSSAELLLKEPAILVNDNTGAAFLPDDSQLDAHRAVAYIEKGNRAFAT 215
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEA-VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET 311
GRYAEFY++PVT L+RS+ +V A V+T K LY KKA +VAAGCWSGSLMH+LL++
Sbjct: 216 AGRYAEFYNEPVTGLIRSDGDSKVVAGVKTLKRNLYGKKATIVAAGCWSGSLMHELLKDC 275
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTA 371
I LD+PVKPRKGHLLV+ENF+S LNH MEAGY H ++ V+ ++LSISMTA
Sbjct: 276 NIPLDVPVKPRKGHLLVVENFDSFHLNHGIMEAGYSNHQSASVSGLDVDE-RMLSISMTA 334
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
T D GNLVLGSSR+F GF+TE ++ II IW+RAAEF+PKLRD+ L DFI NRKVR+GL
Sbjct: 335 TMDTSGNLVLGSSREFVGFDTEADEFIIRCIWERAAEFFPKLRDISLEDFIRNRKVRVGL 394
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
RPYMPDGKPVIG VPGL ++LA GHEG GLS+AL TAE+V DMVL P +VD++ F V+
Sbjct: 395 RPYMPDGKPVIGSVPGLQNMYLAAGHEGGGLSMALATAEMVTDMVLGKPSQVDTSTFGVK 454
Query: 492 G-RCC 495
G RCC
Sbjct: 455 GRRCC 459
>gi|356527281|ref|XP_003532240.1| PREDICTED: D-amino acid dehydrogenase small subunit-like [Glycine
max]
Length = 465
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/398 (65%), Positives = 317/398 (79%), Gaps = 1/398 (0%)
Query: 94 LTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKML 153
LTIAR LV SDLSVAVVDK VPCSGATGAGQG++WMV++TPGS WDLA RS++LWK L
Sbjct: 65 LTIARHFLVSSDLSVAVVDKAVPCSGATGAGQGHLWMVNKTPGSATWDLASRSHQLWKTL 124
Query: 154 ADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQA 213
S+ +QGLDP+ +GWKQ+GSLLIGRT E +LK RVK LCEAGL+AEYL SSDL++
Sbjct: 125 VQSIEEQGLDPMVELGWKQSGSLLIGRTDAESDVLKGRVKLLCEAGLKAEYLCSSDLIKE 184
Query: 214 EPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST 273
EP+L+V +DS AAFLP D Q+DA VAYIEK NR FASKGRY EFY DPV C +RS+S
Sbjct: 185 EPDLLVDKDSAAAFLPDDCQIDAYRTVAYIEKTNRSFASKGRYTEFYDDPVKCFIRSDSN 244
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
GEV+AVQTSKNT+YSKKA++VAAGCW+GSLM DL R + L +PV PRKGHLLV++NFN
Sbjct: 245 GEVKAVQTSKNTIYSKKAVIVAAGCWTGSLMQDLFRNWGMDLHVPVMPRKGHLLVVQNFN 304
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
L++NH MEA Y+ H ++ +H + LS+SM A+ D GNL+LGSSR+F GFNT
Sbjct: 305 FLQMNHGLMEADYLNHPTISGSESP-DHQKNLSVSMVASIDAAGNLLLGSSREFVGFNTN 363
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
++++++ IWKR EF+PKL+ L L+D ++RKVRIGLRPYMP+GKPVIGPVPGLS V+L
Sbjct: 364 LDESVVSYIWKRVGEFFPKLKTLPLSDLSASRKVRIGLRPYMPNGKPVIGPVPGLSNVYL 423
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
A GHEG GL +ALGTAE++ +MVL P KVDS PFAVQ
Sbjct: 424 AAGHEGSGLLMALGTAEMIVEMVLGYPAKVDSTPFAVQ 461
>gi|359494764|ref|XP_003634835.1| PREDICTED: FAD-dependent oxidoreductase domain-containing protein
1-like [Vitis vinifera]
Length = 442
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 258/415 (62%), Positives = 318/415 (76%), Gaps = 11/415 (2%)
Query: 34 SAAFAFKSSFFGKK----PLSLSVNKTRPGRALGPTGYSRLNPITASSRCHTFDVIIIGA 89
S F +S+FFG K LS S K R R+ GP S ++P AS H+FDV+IIGA
Sbjct: 24 SCGFVGESNFFGSKFPQRILSFSTKKIRAERS-GPAHGSAMDPTRAS---HSFDVVIIGA 79
Query: 90 GIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKL 149
GIIGL+IARQ L+ SDLSVAVVDK VPCSG+TGAGQGY+WMVH+TPGS+IW+L++RS+KL
Sbjct: 80 GIIGLSIARQFLLHSDLSVAVVDKDVPCSGSTGAGQGYLWMVHKTPGSDIWELSIRSHKL 139
Query: 150 WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSD 209
W++LA+S+++QG++PL+V+GWK+TGSLLIGRT +E MLK RV L EAGL AEYL SSD
Sbjct: 140 WELLAESIQEQGMNPLEVLGWKKTGSLLIGRTLKESDMLKRRVNLLVEAGLSAEYLCSSD 199
Query: 210 LLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLR 269
LL EP +MV ++ AAFLP D QLDA VA+I K N FAS+GRYAEF++DP T LLR
Sbjct: 200 LLLKEPAVMVEKEGGAAFLPDDCQLDARHTVAFIRKANEVFASEGRYAEFFNDPATLLLR 259
Query: 270 SNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVL 329
S +TGE+EAVQTSKN LY KKAI+VAAGCWSGSL+HDLLR +++VLD+PVKPRKGHLLVL
Sbjct: 260 SGNTGEIEAVQTSKNILYRKKAIIVAAGCWSGSLIHDLLRNSDVVLDVPVKPRKGHLLVL 319
Query: 330 ENFNSLKLNHASMEAGYVGHHDLTLH---PGQVNHGQILSISMTATTDVIGNLVLGSSRQ 386
ENFN L+L H ME GY H H + GQ LSISMTAT D +GNLVLGSSRQ
Sbjct: 320 ENFNFLQLKHGLMEVGYANHEVTAQHTTSSASGDQGQALSISMTATMDTVGNLVLGSSRQ 379
Query: 387 FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
F+GF+T V++ I+D IW+RA F+P L++L L DF +R+VR+GLRPY P+
Sbjct: 380 FSGFDTNVDEYILDHIWERARVFFPSLKELPLNDFTRSREVRVGLRPYSESQYPL 434
>gi|297742824|emb|CBI35578.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/415 (61%), Positives = 317/415 (76%), Gaps = 11/415 (2%)
Query: 34 SAAFAFKSSFFGKK----PLSLSVNKTRPGRALGPTGYSRLNPITASSRCHTFDVIIIGA 89
S F +S+FFG K LS S K R R+ GP S ++P AS H+FDV+IIGA
Sbjct: 24 SCGFVGESNFFGSKFPQRILSFSTKKIRAERS-GPAHGSAMDPTRAS---HSFDVVIIGA 79
Query: 90 GIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKL 149
GIIGL+IARQ L+ SDLSVAVVDK VPCSG+TGAGQGY+WMVH+TPGS+IW+L++RS+KL
Sbjct: 80 GIIGLSIARQFLLHSDLSVAVVDKDVPCSGSTGAGQGYLWMVHKTPGSDIWELSIRSHKL 139
Query: 150 WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSD 209
W++LA+S+++QG++PL+V+GWK+TGSLLIGRT +E MLK RV L EAGL AEYL SSD
Sbjct: 140 WELLAESIQEQGMNPLEVLGWKKTGSLLIGRTLKESDMLKRRVNLLVEAGLSAEYLCSSD 199
Query: 210 LLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLR 269
LL EP +MV ++ AAFLP D QLDA VA+I K N FAS+GRYAEF++DP T LLR
Sbjct: 200 LLLKEPAVMVEKEGGAAFLPDDCQLDARHTVAFIRKANEVFASEGRYAEFFNDPATLLLR 259
Query: 270 SNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVL 329
S +TGE+EAVQTSKN LY KKAI+VAAGCWSGSL+HDLLR +++VLD+PVKPRKGHLLVL
Sbjct: 260 SGNTGEIEAVQTSKNILYRKKAIIVAAGCWSGSLIHDLLRNSDVVLDVPVKPRKGHLLVL 319
Query: 330 ENFNSLKLNHASMEAGYVGHHDLTLH---PGQVNHGQILSISMTATTDVIGNLVLGSSRQ 386
ENFN L+L H ME GY H H + GQ LSISMTAT D +GNLVLG SRQ
Sbjct: 320 ENFNFLQLKHGLMEVGYANHEVTAQHTTSSASGDQGQALSISMTATMDTVGNLVLGHSRQ 379
Query: 387 FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
F+GF+T V++ I+D IW+RA F+P L++L L DF +R+VR+GLRPY P+
Sbjct: 380 FSGFDTNVDEYILDHIWERARVFFPSLKELPLNDFTRSREVRVGLRPYSESQYPL 434
>gi|51968424|dbj|BAD42904.1| putative protein [Arabidopsis thaliana]
gi|51968900|dbj|BAD43142.1| putative protein [Arabidopsis thaliana]
gi|51971108|dbj|BAD44246.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/368 (64%), Positives = 291/368 (79%), Gaps = 3/368 (0%)
Query: 130 MVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLK 189
M H+ PGS++WDL LRS++LW LA+SL D GLDP +++GWK+TGSLLIGRT EE V LK
Sbjct: 1 MTHKKPGSDVWDLTLRSHELWHKLAESLTDDGLDPEELLGWKKTGSLLIGRTTEECVALK 60
Query: 190 ERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRH 249
++V +L EAGLR EYLSS++LL EP ++V +++ AAFLP DSQLDA AVAYIEKGNR
Sbjct: 61 QKVHELSEAGLRTEYLSSAELLLKEPAILVNDNTGAAFLPDDSQLDAHRAVAYIEKGNRA 120
Query: 250 FASKGRYAEFYHDPVTCLLRSNSTGEVEA-VQTSKNTLYSKKAIVVAAGCWSGSLMHDLL 308
FA+ GRYAEFY++PVT L+RS+ +V A V+T K LY KKA +VAAGCWSGSLMH+LL
Sbjct: 121 FATAGRYAEFYNEPVTGLIRSDGDSKVVAGVKTLKRNLYGKKATIVAAGCWSGSLMHELL 180
Query: 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSIS 368
++ I LD+PVKPRKGHLLV+ENF+S LNH MEAGY H ++ V+ ++LSIS
Sbjct: 181 KDCNIPLDVPVKPRKGHLLVVENFDSFHLNHGIMEAGYSNHQSASVSGLDVDE-RMLSIS 239
Query: 369 MTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR 428
MTAT D GNLVLGSSR+F GF+TE ++ II IW+RAAEF+PKLRD+ L DFI NRKVR
Sbjct: 240 MTATMDTSGNLVLGSSREFVGFDTEADEFIIRCIWERAAEFFPKLRDISLEDFIRNRKVR 299
Query: 429 IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+GLRPYMPDGKPVIG VPGL ++LA GHEG GLS+AL TAE+V DMVL P +VD++ F
Sbjct: 300 VGLRPYMPDGKPVIGSVPGLQNMYLAAGHEGGGLSMALATAEMVTDMVLGKPSQVDTSTF 359
Query: 489 AVQG-RCC 495
V+G RCC
Sbjct: 360 GVKGRRCC 367
>gi|51969280|dbj|BAD43332.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/368 (63%), Positives = 290/368 (78%), Gaps = 3/368 (0%)
Query: 130 MVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLK 189
M H+ PGS++WDL LRS++LW L +SL D GLDP +++GWK+TGSLLIGRT EE V LK
Sbjct: 1 MTHKKPGSDVWDLTLRSHELWHKLTESLTDDGLDPEELLGWKKTGSLLIGRTTEECVALK 60
Query: 190 ERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRH 249
++V +L EAGLR EYLSS++LL EP ++V +++ AAFLP DSQLDA AVAYIEKGNR
Sbjct: 61 QKVHELSEAGLRTEYLSSAELLLKEPAILVNDNTGAAFLPDDSQLDAHRAVAYIEKGNRA 120
Query: 250 FASKGRYAEFYHDPVTCLLRSNSTGEVEA-VQTSKNTLYSKKAIVVAAGCWSGSLMHDLL 308
FA+ GRYAEFY++PVT L+RS+ +V A V+T K LY KKA +VAAGCWSGSLMH+LL
Sbjct: 121 FATAGRYAEFYNEPVTGLIRSDGDSKVVAGVKTLKRNLYGKKATIVAAGCWSGSLMHELL 180
Query: 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSIS 368
++ I LD+PVKPRKGHLLV+ENF+S LNH MEAGY H ++ V+ ++LSIS
Sbjct: 181 KDCNIPLDVPVKPRKGHLLVVENFDSFHLNHGIMEAGYSNHQSASVSGLDVDE-RMLSIS 239
Query: 369 MTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR 428
MTAT D GNLVLGSSR+F GF+TE ++ II IW+RAAEF+PKLRD+ L DFI NRKVR
Sbjct: 240 MTATMDTSGNLVLGSSREFVGFDTEADEFIIRCIWERAAEFFPKLRDISLEDFIRNRKVR 299
Query: 429 IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+GLRPYMPDGKPVIG VPGL ++LA GHEG GLS+AL TAE+V DMVL P +VD++ F
Sbjct: 300 VGLRPYMPDGKPVIGSVPGLQNMYLAAGHEGGGLSMALATAEMVTDMVLGKPSQVDTSTF 359
Query: 489 AVQG-RCC 495
V+G RCC
Sbjct: 360 GVKGRRCC 367
>gi|79612894|ref|NP_974906.2| FAD-dependent oxidoreductase [Arabidopsis thaliana]
gi|332008288|gb|AED95671.1| FAD-dependent oxidoreductase [Arabidopsis thaliana]
Length = 425
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/363 (65%), Positives = 291/363 (80%), Gaps = 4/363 (1%)
Query: 73 ITASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVH 132
+TAS +FDV+++G GIIGLTIARQ L GSDLSVAVVDK VPCSGATGAGQGYIWM H
Sbjct: 38 VTASRS--SFDVVVVGGGIIGLTIARQFLTGSDLSVAVVDKAVPCSGATGAGQGYIWMTH 95
Query: 133 RTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERV 192
+ PGS++WDL LRS++LW LA+SL D GLDP +++GWK+TGSLLIGRT EE V LK++V
Sbjct: 96 KKPGSDVWDLTLRSHELWHKLAESLTDDGLDPEELLGWKKTGSLLIGRTTEECVALKQKV 155
Query: 193 KQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS 252
+L EAGLR EYLSS++LL EP ++V +++ AAFLP DSQLDA AVAYIEKGNR FA+
Sbjct: 156 HELSEAGLRTEYLSSAELLLKEPAILVNDNTGAAFLPDDSQLDAHRAVAYIEKGNRAFAT 215
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEA-VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET 311
GRYAEFY++PVT L+RS+ +V A V+T K LY KKA +VAAGCWSGSLMH+LL++
Sbjct: 216 AGRYAEFYNEPVTGLIRSDGDSKVVAGVKTLKRNLYGKKATIVAAGCWSGSLMHELLKDC 275
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTA 371
I LD+PVKPRKGHLLV+ENF+S LNH MEAGY H ++ V+ ++LSISMTA
Sbjct: 276 NIPLDVPVKPRKGHLLVVENFDSFHLNHGIMEAGYSNHQSASVSGLDVDE-RMLSISMTA 334
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
T D GNLVLGSSR+F GF+TE ++ II IW+RAAEF+PKLRD+ L DFI NRKVR+GL
Sbjct: 335 TMDTSGNLVLGSSREFVGFDTEADEFIIRCIWERAAEFFPKLRDISLEDFIRNRKVRVGL 394
Query: 432 RPY 434
RPY
Sbjct: 395 RPY 397
>gi|125564358|gb|EAZ09738.1| hypothetical protein OsI_32026 [Oryza sativa Indica Group]
gi|222641909|gb|EEE70041.1| hypothetical protein OsJ_29995 [Oryza sativa Japonica Group]
Length = 491
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/435 (55%), Positives = 309/435 (71%), Gaps = 17/435 (3%)
Query: 69 RLNPITASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI 128
R P AS+ H DV+++GAGIIGL+IAR LL+ + LSVAV D VPC+GATGAGQGY+
Sbjct: 55 RPEPAPASASHH--DVVVVGAGIIGLSIARHLLLHTPLSVAVADAAVPCTGATGAGQGYL 112
Query: 129 WMVHRTPGSEIWDLALRSNKLWKMLA---DSLRDQGLDPLQVIGWKQTGSLLIGRTPEEL 185
WM HRTPGS+ W+LA+RS +LW+ LA D L G + +GW +TGSLL+GRT EE+
Sbjct: 113 WMSHRTPGSDTWELAVRSKQLWEELAAEVDGLGGGGAR--ERLGWMRTGSLLVGRTSEEM 170
Query: 186 VMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEK 245
L+ER K L +AG+RAE LS++ L EPEL VG D A FLP D Q+DA AV+ IEK
Sbjct: 171 ATLEERTKALSQAGIRAECLSAASLHALEPELYVGHDGGAMFLPEDCQIDAFQAVSLIEK 230
Query: 246 GNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMH 305
N ++S+GRY E Y+DP L+RS +TG V+ VQTSK+ LY +KAIV+A+G W+ +L+
Sbjct: 231 TNGSYSSEGRYMEIYNDPAMSLVRSETTGTVQGVQTSKHILYGRKAIVIASGAWTRTLLR 290
Query: 306 DLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHH-------DLTLHPGQ 358
L E LDIPV PRKGHLLVL+ F+ LKLNH ME GYVGH L+ +
Sbjct: 291 SFL-EPNPTLDIPVMPRKGHLLVLDKFDKLKLNHGLMELGYVGHQVAKSSGTPLSSESSE 349
Query: 359 VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCL 418
HG LSISMTAT + GNL+LGSSR+F GF+ EV+ +I+ IW RAAEF+P L+++ L
Sbjct: 350 DEHGA-LSISMTATMNTKGNLILGSSREFKGFSREVDMSILKCIWDRAAEFFPTLKNVHL 408
Query: 419 ADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLT 478
D N ++RIG RP+MPDGKPVIG VP L V +ATGHEG GL+LALGTAE+V DM+L
Sbjct: 409 -DIDENTEIRIGHRPFMPDGKPVIGSVPDLPNVLIATGHEGSGLALALGTAEMVTDMILG 467
Query: 479 NPLKVDSAPFAVQGR 493
NP KVD +PF+++ R
Sbjct: 468 NPGKVDFSPFSIKDR 482
>gi|115480125|ref|NP_001063656.1| Os09g0514100 [Oryza sativa Japonica Group]
gi|50725351|dbj|BAD34423.1| unknown protein [Oryza sativa Japonica Group]
gi|113631889|dbj|BAF25570.1| Os09g0514100 [Oryza sativa Japonica Group]
Length = 487
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/435 (55%), Positives = 309/435 (71%), Gaps = 17/435 (3%)
Query: 69 RLNPITASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI 128
R P AS+ H DV+++GAGIIGL+IAR LL+ + LSVAV D VPC+GATGAGQGY+
Sbjct: 55 RPEPAPASASHH--DVVVVGAGIIGLSIARHLLLHTPLSVAVADAAVPCTGATGAGQGYL 112
Query: 129 WMVHRTPGSEIWDLALRSNKLWKMLA---DSLRDQGLDPLQVIGWKQTGSLLIGRTPEEL 185
WM HRTPGS+ W+LA+RS +LW+ LA D L G + +GW +TGSLL+GRT EE+
Sbjct: 113 WMSHRTPGSDTWELAVRSKQLWEELAAEVDGLGGGGAR--ERLGWMRTGSLLVGRTSEEM 170
Query: 186 VMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEK 245
L+ER K L +AG+RAE LS++ L EPEL VG D A FLP D Q+DA AV+ IEK
Sbjct: 171 ATLEERTKALSQAGIRAECLSAASLHALEPELYVGHDGGAMFLPEDCQIDAFQAVSLIEK 230
Query: 246 GNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMH 305
N ++S+GRY E Y+DP L+RS +TG V+ VQTSK+ LY +KAIV+A+G W+ +L+
Sbjct: 231 TNGSYSSEGRYMEIYNDPAMSLVRSETTGTVQGVQTSKHILYGRKAIVIASGAWTRTLLR 290
Query: 306 DLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHH-------DLTLHPGQ 358
L E LDIPV PRKGHLLVL+ F+ LKLNH ME GYVGH L+ +
Sbjct: 291 SFL-EPNPTLDIPVMPRKGHLLVLDKFDKLKLNHGLMELGYVGHQVAKSSGTPLSSESSE 349
Query: 359 VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCL 418
HG LSISMTAT + GNL+LGSSR+F GF+ EV+ +I+ IW RAAEF+P L+++ L
Sbjct: 350 DEHGA-LSISMTATMNTKGNLILGSSREFKGFSREVDMSILKCIWDRAAEFFPTLKNVHL 408
Query: 419 ADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLT 478
D N ++RIG RP+MPDGKPVIG VP L V +ATGHEG GL+LALGTAE+V DM+L
Sbjct: 409 -DIDENTEIRIGHRPFMPDGKPVIGSVPDLPNVLIATGHEGSGLALALGTAEMVTDMILG 467
Query: 479 NPLKVDSAPFAVQGR 493
NP KVD +PF+++ R
Sbjct: 468 NPGKVDFSPFSIKDR 482
>gi|414886250|tpg|DAA62264.1| TPA: hypothetical protein ZEAMMB73_977642 [Zea mays]
Length = 504
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/407 (55%), Positives = 295/407 (72%), Gaps = 9/407 (2%)
Query: 94 LTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKML 153
L IAR LL+ + LSVA+ D VPCSGATGAGQGYIWM HRTPG++ W+LALRS +LW+ L
Sbjct: 82 LAIARHLLLHTSLSVAIADAAVPCSGATGAGQGYIWMSHRTPGTDTWELALRSKQLWEEL 141
Query: 154 ADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQ 212
A + QG + +GW +TGSLL+GR+ EEL L ER K L +AG+ AE+LS+S L
Sbjct: 142 ATEVDGQGGGGAREKLGWMRTGSLLVGRSSEELGTLDERTKALSQAGIHAEFLSASSLHA 201
Query: 213 AEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNS 272
EP L VG+D A FLP D Q+DA AV+ IEK N ++S+GRY EFY+DP L+RS+
Sbjct: 202 LEPALSVGKDGGAMFLPQDCQIDAFQAVSLIEKTNNSYSSEGRYREFYNDPAMSLIRSDV 261
Query: 273 TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENF 332
TG+VEAVQTS+N LY +KA V+A+G W+ SL+H + E + LDIPVKPRKGHLLVLE F
Sbjct: 262 TGKVEAVQTSRNILYGRKAFVIASGAWTRSLLHSFV-EPALTLDIPVKPRKGHLLVLEKF 320
Query: 333 NSLKLNHASMEAGYVGHH----DLTLHPGQVNHGQI--LSISMTATTDVIGNLVLGSSRQ 386
+ +KLNHA ME GYV H + T + + ++ LS+SMTAT D GNLVLGSSR+
Sbjct: 321 DKVKLNHALMEVGYVDHQITKSNSTHIASESSEDELGALSVSMTATLDTKGNLVLGSSRE 380
Query: 387 FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVP 446
F GF+ EV+++++ IW+RA EF+P ++++ D N ++RIG RPYMPDGKPVI +P
Sbjct: 381 FKGFSREVDRSVVQCIWERAGEFFPAMKNVSF-DIDQNTQIRIGHRPYMPDGKPVIDFIP 439
Query: 447 GLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
LS + +ATGHEG GL+LALGTAE+V DM+L NP KV +PF+++ R
Sbjct: 440 NLSNILIATGHEGSGLTLALGTAEMVTDMILGNPGKVSYSPFSIKRR 486
>gi|414886252|tpg|DAA62266.1| TPA: oxidoreductase [Zea mays]
Length = 493
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/407 (55%), Positives = 295/407 (72%), Gaps = 9/407 (2%)
Query: 94 LTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKML 153
L IAR LL+ + LSVA+ D VPCSGATGAGQGYIWM HRTPG++ W+LALRS +LW+ L
Sbjct: 82 LAIARHLLLHTSLSVAIADAAVPCSGATGAGQGYIWMSHRTPGTDTWELALRSKQLWEEL 141
Query: 154 ADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQ 212
A + QG + +GW +TGSLL+GR+ EEL L ER K L +AG+ AE+LS+S L
Sbjct: 142 ATEVDGQGGGGAREKLGWMRTGSLLVGRSSEELGTLDERTKALSQAGIHAEFLSASSLHA 201
Query: 213 AEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNS 272
EP L VG+D A FLP D Q+DA AV+ IEK N ++S+GRY EFY+DP L+RS+
Sbjct: 202 LEPALSVGKDGGAMFLPQDCQIDAFQAVSLIEKTNNSYSSEGRYREFYNDPAMSLIRSDV 261
Query: 273 TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENF 332
TG+VEAVQTS+N LY +KA V+A+G W+ SL+H + E + LDIPVKPRKGHLLVLE F
Sbjct: 262 TGKVEAVQTSRNILYGRKAFVIASGAWTRSLLHSFV-EPALTLDIPVKPRKGHLLVLEKF 320
Query: 333 NSLKLNHASMEAGYVGHH----DLTLHPGQVNHGQI--LSISMTATTDVIGNLVLGSSRQ 386
+ +KLNHA ME GYV H + T + + ++ LS+SMTAT D GNLVLGSSR+
Sbjct: 321 DKVKLNHALMEVGYVDHQITKSNSTHIASESSEDELGALSVSMTATLDTKGNLVLGSSRE 380
Query: 387 FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVP 446
F GF+ EV+++++ IW+RA EF+P ++++ D N ++RIG RPYMPDGKPVI +P
Sbjct: 381 FKGFSREVDRSVVQCIWERAGEFFPAMKNVSF-DIDQNTQIRIGHRPYMPDGKPVIDFIP 439
Query: 447 GLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
LS + +ATGHEG GL+LALGTAE+V DM+L NP KV +PF+++ R
Sbjct: 440 NLSNILIATGHEGSGLTLALGTAEMVTDMILGNPGKVSYSPFSIKRR 486
>gi|414886251|tpg|DAA62265.1| TPA: oxidoreductase [Zea mays]
Length = 489
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/407 (55%), Positives = 295/407 (72%), Gaps = 9/407 (2%)
Query: 94 LTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKML 153
L IAR LL+ + LSVA+ D VPCSGATGAGQGYIWM HRTPG++ W+LALRS +LW+ L
Sbjct: 82 LAIARHLLLHTSLSVAIADAAVPCSGATGAGQGYIWMSHRTPGTDTWELALRSKQLWEEL 141
Query: 154 ADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQ 212
A + QG + +GW +TGSLL+GR+ EEL L ER K L +AG+ AE+LS+S L
Sbjct: 142 ATEVDGQGGGGAREKLGWMRTGSLLVGRSSEELGTLDERTKALSQAGIHAEFLSASSLHA 201
Query: 213 AEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNS 272
EP L VG+D A FLP D Q+DA AV+ IEK N ++S+GRY EFY+DP L+RS+
Sbjct: 202 LEPALSVGKDGGAMFLPQDCQIDAFQAVSLIEKTNNSYSSEGRYREFYNDPAMSLIRSDV 261
Query: 273 TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENF 332
TG+VEAVQTS+N LY +KA V+A+G W+ SL+H + E + LDIPVKPRKGHLLVLE F
Sbjct: 262 TGKVEAVQTSRNILYGRKAFVIASGAWTRSLLHSFV-EPALTLDIPVKPRKGHLLVLEKF 320
Query: 333 NSLKLNHASMEAGYVGHH----DLTLHPGQVNHGQI--LSISMTATTDVIGNLVLGSSRQ 386
+ +KLNHA ME GYV H + T + + ++ LS+SMTAT D GNLVLGSSR+
Sbjct: 321 DKVKLNHALMEVGYVDHQITKSNSTHIASESSEDELGALSVSMTATLDTKGNLVLGSSRE 380
Query: 387 FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVP 446
F GF+ EV+++++ IW+RA EF+P ++++ D N ++RIG RPYMPDGKPVI +P
Sbjct: 381 FKGFSREVDRSVVQCIWERAGEFFPAMKNVSF-DIDQNTQIRIGHRPYMPDGKPVIDFIP 439
Query: 447 GLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
LS + +ATGHEG GL+LALGTAE+V DM+L NP KV +PF+++ R
Sbjct: 440 NLSNILIATGHEGSGLTLALGTAEMVTDMILGNPGKVSYSPFSIKRR 486
>gi|226532528|ref|NP_001147594.1| oxidoreductase [Zea mays]
gi|195612398|gb|ACG28029.1| oxidoreductase [Zea mays]
Length = 489
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/407 (55%), Positives = 295/407 (72%), Gaps = 9/407 (2%)
Query: 94 LTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKML 153
L IAR LL+ + LSVA+ D VPCSGATGAGQGYIWM HRTPG++ W+LALRS +LW+ L
Sbjct: 82 LAIARHLLLHTSLSVAIADAAVPCSGATGAGQGYIWMSHRTPGTDTWELALRSKQLWEEL 141
Query: 154 ADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQ 212
A + QG + +GW +TGSLL+GR+ EEL L ER K L +AG+ AE+LS+S L
Sbjct: 142 ATEVDGQGGGGAREKLGWMRTGSLLVGRSSEELGTLDERTKALSQAGIHAEFLSASSLHA 201
Query: 213 AEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNS 272
EP L VG+D A FLP D Q+DA AV+ IEK N ++S+GRY EFY+DP L+RS+
Sbjct: 202 LEPALSVGKDGGAMFLPQDCQIDAFQAVSLIEKTNNSYSSEGRYREFYNDPAMSLIRSDV 261
Query: 273 TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENF 332
TG+VEAVQTS+N LY +KA V+A+G W+ SL+H + E + LDIPVKPRKGHLLVLE F
Sbjct: 262 TGKVEAVQTSRNILYGRKAFVIASGAWTRSLLHSFV-EPALTLDIPVKPRKGHLLVLEKF 320
Query: 333 NSLKLNHASMEAGYVGHH----DLTLHPGQVNHGQI--LSISMTATTDVIGNLVLGSSRQ 386
+ +KLNHA ME GYV H + T + + ++ LS+SMTAT D GNLVLGSSR+
Sbjct: 321 DKVKLNHALMEVGYVDHQITKSNSTHIASESSEDELGALSVSMTATLDTKGNLVLGSSRE 380
Query: 387 FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVP 446
F GF+ EV+++++ IW+RA EF+P ++++ D N ++RIG RPYMPDGKPVI +P
Sbjct: 381 FKGFSREVDRSVVQCIWERAGEFFPAMKNVSF-DIDQNTQIRIGHRPYMPDGKPVIDFIP 439
Query: 447 GLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
LS + +ATGHEG GL+LALGTAE+V DM+L NP KV +PF+++ R
Sbjct: 440 NLSNILIATGHEGSGLTLALGTAEMVTDMILGNPGKVSYSPFSIKRR 486
>gi|242045292|ref|XP_002460517.1| hypothetical protein SORBIDRAFT_02g029750 [Sorghum bicolor]
gi|241923894|gb|EER97038.1| hypothetical protein SORBIDRAFT_02g029750 [Sorghum bicolor]
Length = 487
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/407 (55%), Positives = 292/407 (71%), Gaps = 9/407 (2%)
Query: 94 LTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKML 153
L IAR LL+ + LSVA+ D VPCSGATGAGQGYIWM HR PGS+ W+LALRS +LW+ L
Sbjct: 80 LAIARHLLLHTSLSVAIADAAVPCSGATGAGQGYIWMSHRRPGSDTWELALRSKQLWEEL 139
Query: 154 ADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQ 212
A + QG + +GW +TGSLL+GRT EEL L+ER K L +AG+ E+LS+S L
Sbjct: 140 AAEVDGQGGGGARERLGWMRTGSLLVGRTSEELDTLEERTKVLSQAGIHVEFLSASSLHA 199
Query: 213 AEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNS 272
EP L VG+D A FLP D Q+DA AV+ IEK N ++S+GRY EFY+DP L+RS
Sbjct: 200 LEPALSVGKDGGAMFLPQDCQIDAFQAVSLIEKTNNSYSSEGRYREFYNDPAMSLIRSEV 259
Query: 273 TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENF 332
TG VEAVQTS+N LY +KA ++A+G W+ SL+H L E ++LDIPVKPRKGHLLVLE F
Sbjct: 260 TGTVEAVQTSRNILYGRKAFIIASGAWTRSLLHSFL-EPALMLDIPVKPRKGHLLVLEKF 318
Query: 333 NSLKLNHASMEAGYVGHH----DLTLHPGQVNHGQI--LSISMTATTDVIGNLVLGSSRQ 386
+ +KLNHA ME GYV H + T + + ++ LS+SMTAT D GNLVLGSSR+
Sbjct: 319 DKVKLNHALMEVGYVDHQIAKPNSTHMASESSEDELGALSVSMTATVDTKGNLVLGSSRE 378
Query: 387 FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVP 446
F GF+ EV+++++ IW+RA EF+P ++++ D N ++RIG RPYMPDGKPVI +P
Sbjct: 379 FKGFSREVDRSVVQCIWERAGEFFPAMKNVSF-DIDQNTQIRIGHRPYMPDGKPVIDFIP 437
Query: 447 GLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
L + +ATGHEG GL+LALGTAE+V DM+L NP KV +PF+++ R
Sbjct: 438 DLPNILIATGHEGNGLTLALGTAEMVTDMILGNPGKVSHSPFSIKHR 484
>gi|357154277|ref|XP_003576729.1| PREDICTED: D-amino acid dehydrogenase 1 small subunit-like
[Brachypodium distachyon]
Length = 484
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/407 (56%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 94 LTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKML 153
L+IAR LL+ + LSVAV D VPCSGATGAGQGY+WM HRTPGS+ W+LA+RS +LW+ L
Sbjct: 72 LSIARHLLLNTPLSVAVADAAVPCSGATGAGQGYVWMSHRTPGSDTWELAVRSKQLWEEL 131
Query: 154 ADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQ 212
AD + G + +GW +TGSLL+GRT EEL L+E+ K C+AG+ AE LS+S L
Sbjct: 132 ADEMDGLGGGGARESLGWMKTGSLLVGRTSEELATLEEKTKVFCQAGVHAECLSASSLRL 191
Query: 213 AEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNS 272
EP L VG + A LP D Q+DA AV+ IEK N ++ +GRY Y+DP L+RS
Sbjct: 192 LEPALSVGNEGGAMLLPKDRQIDAFRAVSSIEKINSSYSPEGRYMALYNDPAMSLIRSEV 251
Query: 273 TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENF 332
TG VEAVQTSKN LY +KAIVVA+G W+ SL+H+ L LDIPVKPRKGHLLVLE F
Sbjct: 252 TGRVEAVQTSKNILYGRKAIVVASGAWTRSLLHNFLGPNS-TLDIPVKPRKGHLLVLEKF 310
Query: 333 NSLKLNHASMEAGYVGHHDLTLH------PGQVNHGQILSISMTATTDVIGNLVLGSSRQ 386
+ LKL+H ME GYV H D+ L+ + LSISMTAT D GNLVLGSSR+
Sbjct: 311 DKLKLSHGIMELGYVDHQDVKLNSVPLSSKSNEDEHDDLSISMTATLDTKGNLVLGSSRE 370
Query: 387 FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVP 446
F GF+ EV+++I+ IW RA EF+P L ++ L D N +R+G RPYMPDGKPVIG VP
Sbjct: 371 FKGFSREVDRSILKCIWDRAGEFFPALTNVHL-DIEQNTDIRVGHRPYMPDGKPVIGFVP 429
Query: 447 GLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
LS V +ATGHEG GL+LALGTAE+V DM++ NP +VD PF+++ R
Sbjct: 430 DLSNVLIATGHEGSGLALALGTAEMVTDMIIDNPGRVDFTPFSIENR 476
>gi|326506150|dbj|BAJ91314.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 480
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/407 (56%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 94 LTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKML 153
L+IAR LL+ + LSVAV D VPCSGATGAGQGY+WM HRTPGS+ WDLA+RS +LW+ L
Sbjct: 71 LSIARHLLLHTPLSVAVADAAVPCSGATGAGQGYVWMSHRTPGSDTWDLAVRSKQLWEDL 130
Query: 154 ADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQ 212
A + G + +GW +TGSLL+GRT +EL L+E+ K L +AG+ AE LS+S L
Sbjct: 131 AAEMDGHGAGGARESLGWMKTGSLLVGRTSKELATLEEKTKVLSQAGISAECLSASSLHA 190
Query: 213 AEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNS 272
EP L VG D A FLP D Q+DA AV+ IEK NR ++ KGRY E Y+DP L+RS
Sbjct: 191 LEPALCVGNDGGAMFLPEDRQIDAFQAVSLIEKINRSYSPKGRYMELYNDPAMSLIRSEV 250
Query: 273 TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENF 332
TG VE VQTSKN LY +KA VVA+G W+ SL+H L LDIPVKPRKGHLLVLENF
Sbjct: 251 TGRVEGVQTSKNILYGRKATVVASGAWTRSLLHSFLGPN-CTLDIPVKPRKGHLLVLENF 309
Query: 333 NSLKLNHASMEAGYVGH-----HDLTLHPGQVNHGQ-ILSISMTATTDVIGNLVLGSSRQ 386
N LKLNH ME GYV H + + L P Q SISMTAT + G+LVLGSSR+
Sbjct: 310 NRLKLNHGIMELGYVDHQGDNSNSVHLSPKYKEDDQAAASISMTATLNTKGHLVLGSSRE 369
Query: 387 FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVP 446
F GF+ EV+++I+ IW RA EF+P L ++ L D ++++RIG RPYMPDGKPVIG VP
Sbjct: 370 FKGFSREVDKSILKSIWDRAGEFFPALNNIHL-DIDEDKEIRIGHRPYMPDGKPVIGFVP 428
Query: 447 GLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
+S V +ATGHEG GL+LALGTAE+V DM+L + +VD PF+++ R
Sbjct: 429 DMSNVLIATGHEGSGLALALGTAEMVTDMILGDLGRVDFTPFSIENR 475
>gi|326512110|dbj|BAJ96036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 891
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/407 (56%), Positives = 286/407 (70%), Gaps = 9/407 (2%)
Query: 94 LTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKML 153
L+IAR LL+ + LSVAV D VPCSGATGAGQGY+WM HRTPGS+ WDLA+RS +LW+ L
Sbjct: 482 LSIARHLLLHTPLSVAVADAAVPCSGATGAGQGYVWMSHRTPGSDTWDLAVRSKQLWEDL 541
Query: 154 ADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQ 212
A + G + +GW +TGSLL+GRT +EL L+E+ K L +AG+ AE LS+S L
Sbjct: 542 AAEMDGHGAGGARESLGWMKTGSLLVGRTSKELATLEEKTKVLSQAGISAECLSASSLHA 601
Query: 213 AEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNS 272
EP L VG D A FLP D Q+DA AV+ IEK NR ++ KGRY E Y+DP L+RS
Sbjct: 602 LEPALCVGNDGGAMFLPEDRQIDAFQAVSLIEKINRSYSPKGRYMELYNDPAMSLIRSEV 661
Query: 273 TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENF 332
TG VE VQTSKN LY +KA VVA+G W+ SL+H L LDIPVKPRKGHLLVLENF
Sbjct: 662 TGRVEGVQTSKNILYGRKATVVASGAWTRSLLHSFLGPN-CTLDIPVKPRKGHLLVLENF 720
Query: 333 NSLKLNHASMEAGYVGH-----HDLTLHPGQVNHGQ-ILSISMTATTDVIGNLVLGSSRQ 386
N LKLNH ME GYV H + + L P Q SISMTAT + G+LVLGSSR+
Sbjct: 721 NRLKLNHGIMELGYVDHQGDNSNSVHLSPKYKEDDQAAASISMTATLNTKGHLVLGSSRE 780
Query: 387 FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVP 446
F GF+ EV+++I+ IW RA EF+P L ++ L D ++++RIG RPYMPDGKPVIG VP
Sbjct: 781 FKGFSREVDKSILKSIWDRAGEFFPALNNIHL-DIDEDKEIRIGHRPYMPDGKPVIGFVP 839
Query: 447 GLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
+S V +ATGHEG GL+LALGTAE+V DM+L + +VD PF+++ R
Sbjct: 840 DMSNVLIATGHEGSGLALALGTAEMVTDMILGDLGRVDFTPFSIENR 886
>gi|414886253|tpg|DAA62267.1| TPA: hypothetical protein ZEAMMB73_977642 [Zea mays]
Length = 489
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/407 (54%), Positives = 291/407 (71%), Gaps = 13/407 (3%)
Query: 94 LTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKML 153
L IAR LL+ + LSVA+ D VPCSGATGAGQGYIWM HRTPG++ W+LALRS +LW+ L
Sbjct: 82 LAIARHLLLHTSLSVAIADAAVPCSGATGAGQGYIWMSHRTPGTDTWELALRSKQLWEEL 141
Query: 154 ADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQ 212
A + QG + +GW +T +GR+ EEL L ER K L +AG+ AE+LS+S L
Sbjct: 142 ATEVDGQGGGGAREKLGWMRT----VGRSSEELGTLDERTKALSQAGIHAEFLSASSLHA 197
Query: 213 AEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNS 272
EP L VG+D A FLP D Q+DA AV+ IEK N ++S+GRY EFY+DP L+RS+
Sbjct: 198 LEPALSVGKDGGAMFLPQDCQIDAFQAVSLIEKTNNSYSSEGRYREFYNDPAMSLIRSDV 257
Query: 273 TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENF 332
TG+VEAVQTS+N LY +KA V+A+G W+ SL+H + E + LDIPVKPRKGHLLVLE F
Sbjct: 258 TGKVEAVQTSRNILYGRKAFVIASGAWTRSLLHSFV-EPALTLDIPVKPRKGHLLVLEKF 316
Query: 333 NSLKLNHASMEAGYVGHH----DLTLHPGQVNHGQI--LSISMTATTDVIGNLVLGSSRQ 386
+ +KLNHA ME GYV H + T + + ++ LS+SMTAT D GNLVLGSSR+
Sbjct: 317 DKVKLNHALMEVGYVDHQITKSNSTHIASESSEDELGALSVSMTATLDTKGNLVLGSSRE 376
Query: 387 FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVP 446
F GF+ EV+++++ IW+RA EF+P ++++ D N ++RIG RPYMPDGKPVI +P
Sbjct: 377 FKGFSREVDRSVVQCIWERAGEFFPAMKNVSF-DIDQNTQIRIGHRPYMPDGKPVIDFIP 435
Query: 447 GLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
LS + +ATGHEG GL+LALGTAE+V DM+L NP KV +PF+++ R
Sbjct: 436 NLSNILIATGHEGSGLTLALGTAEMVTDMILGNPGKVSYSPFSIKRR 482
>gi|148907874|gb|ABR17060.1| unknown [Picea sitchensis]
Length = 526
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/405 (52%), Positives = 281/405 (69%), Gaps = 6/405 (1%)
Query: 97 ARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADS 156
ARQLL+ +DLSVA+VD PC+GATGAGQGYIWM +RTP S+ W+L RS +LW+
Sbjct: 121 ARQLLLNTDLSVAIVDAKGPCAGATGAGQGYIWMGYRTPESDKWELEARSKQLWEEFVQE 180
Query: 157 LRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPE 216
L GL+PL+++GWK+TGSLL+G T EE L+ERVK L +AG+RAE+ S+S + EP
Sbjct: 181 LEASGLEPLKLLGWKKTGSLLVGTTSEESSALQERVKLLSKAGIRAEFFSASSMHLIEPA 240
Query: 217 LMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
+ VG++ A F+P DSQ+DA LAV++I++ NR F S+GRY EF+ +P LRSN G +
Sbjct: 241 VEVGKEGGALFIPDDSQIDAKLAVSFIQEKNRVFTSQGRYEEFFEEPAVHFLRSNQKGHI 300
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
E VQTSK LY KA+++AAG WS SL+ + E L +PV+PRKGHLLVLE +L+
Sbjct: 301 EGVQTSKRVLYGSKAVILAAGAWSCSLIEKMAEELSFPLHVPVEPRKGHLLVLERPQTLQ 360
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHG------QILSISMTATTDVIGNLVLGSSRQFAGF 390
LNH ME GY H ++ P + LS+SMTAT D G+LVLGSSRQFAGF
Sbjct: 361 LNHGLMEIGYCNHQIASVLPDVSSRSIVHSSLHSLSVSMTATIDSEGSLVLGSSRQFAGF 420
Query: 391 NTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSK 450
+ E E +++ I++RAA+F P L L + + +RIGLRPYMPDGKP+IGPVP L K
Sbjct: 421 DCEPEDVVVNSIFERAAKFLPALNKNSLRELLKGGHIRIGLRPYMPDGKPIIGPVPNLPK 480
Query: 451 VFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGRCC 495
+ LATGHEG GL +A GTAE+V +M+L N K+D PF+ + RCC
Sbjct: 481 LMLATGHEGAGLCMAFGTAEMVVEMILGNATKIDCRPFSPKDRCC 525
>gi|194705530|gb|ACF86849.1| unknown [Zea mays]
gi|414886254|tpg|DAA62268.1| TPA: hypothetical protein ZEAMMB73_977642 [Zea mays]
Length = 531
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/449 (50%), Positives = 295/449 (65%), Gaps = 51/449 (11%)
Query: 94 LTIARQLLVGSDLSVAVVDKVVPCSGATGAG----------------------------- 124
L IAR LL+ + LSVA+ D VPCSGATGAG
Sbjct: 82 LAIARHLLLHTSLSVAIADAAVPCSGATGAGTLPSAPALMLRCFRLYGVGCNTSFGEPLA 141
Query: 125 -------------QGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLD-PLQVIGW 170
QGYIWM HRTPG++ W+LALRS +LW+ LA + QG + +GW
Sbjct: 142 SGFYLGWGSLCAGQGYIWMSHRTPGTDTWELALRSKQLWEELATEVDGQGGGGAREKLGW 201
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPY 230
+TGSLL+GR+ EEL L ER K L +AG+ AE+LS+S L EP L VG+D A FLP
Sbjct: 202 MRTGSLLVGRSSEELGTLDERTKALSQAGIHAEFLSASSLHALEPALSVGKDGGAMFLPQ 261
Query: 231 DSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKK 290
D Q+DA AV+ IEK N ++S+GRY EFY+DP L+RS+ TG+VEAVQTS+N LY +K
Sbjct: 262 DCQIDAFQAVSLIEKTNNSYSSEGRYREFYNDPAMSLIRSDVTGKVEAVQTSRNILYGRK 321
Query: 291 AIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHH 350
A V+A+G W+ SL+H + E + LDIPVKPRKGHLLVLE F+ +KLNHA ME GYV H
Sbjct: 322 AFVIASGAWTRSLLHSFV-EPALTLDIPVKPRKGHLLVLEKFDKVKLNHALMEVGYVDHQ 380
Query: 351 ----DLTLHPGQVNHGQI--LSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWK 404
+ T + + ++ LS+SMTAT D GNLVLGSSR+F GF+ EV+++++ IW+
Sbjct: 381 ITKSNSTHIASESSEDELGALSVSMTATLDTKGNLVLGSSREFKGFSREVDRSVVQCIWE 440
Query: 405 RAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
RA EF+P ++++ D N ++RIG RPYMPDGKPVI +P LS + +ATGHEG GL+L
Sbjct: 441 RAGEFFPAMKNVSF-DIDQNTQIRIGHRPYMPDGKPVIDFIPNLSNILIATGHEGSGLTL 499
Query: 465 ALGTAELVADMVLTNPLKVDSAPFAVQGR 493
ALGTAE+V DM+L NP KV +PF+++ R
Sbjct: 500 ALGTAEMVTDMILGNPGKVSYSPFSIKRR 528
>gi|414886255|tpg|DAA62269.1| TPA: hypothetical protein ZEAMMB73_977642 [Zea mays]
Length = 535
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/449 (50%), Positives = 295/449 (65%), Gaps = 51/449 (11%)
Query: 94 LTIARQLLVGSDLSVAVVDKVVPCSGATGAG----------------------------- 124
L IAR LL+ + LSVA+ D VPCSGATGAG
Sbjct: 82 LAIARHLLLHTSLSVAIADAAVPCSGATGAGTLPSAPALMLRCFRLYGVGCNTSFGEPLA 141
Query: 125 -------------QGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLD-PLQVIGW 170
QGYIWM HRTPG++ W+LALRS +LW+ LA + QG + +GW
Sbjct: 142 SGFYLGWGSLCAGQGYIWMSHRTPGTDTWELALRSKQLWEELATEVDGQGGGGAREKLGW 201
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPY 230
+TGSLL+GR+ EEL L ER K L +AG+ AE+LS+S L EP L VG+D A FLP
Sbjct: 202 MRTGSLLVGRSSEELGTLDERTKALSQAGIHAEFLSASSLHALEPALSVGKDGGAMFLPQ 261
Query: 231 DSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKK 290
D Q+DA AV+ IEK N ++S+GRY EFY+DP L+RS+ TG+VEAVQTS+N LY +K
Sbjct: 262 DCQIDAFQAVSLIEKTNNSYSSEGRYREFYNDPAMSLIRSDVTGKVEAVQTSRNILYGRK 321
Query: 291 AIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHH 350
A V+A+G W+ SL+H + E + LDIPVKPRKGHLLVLE F+ +KLNHA ME GYV H
Sbjct: 322 AFVIASGAWTRSLLHSFV-EPALTLDIPVKPRKGHLLVLEKFDKVKLNHALMEVGYVDHQ 380
Query: 351 ----DLTLHPGQVNHGQI--LSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWK 404
+ T + + ++ LS+SMTAT D GNLVLGSSR+F GF+ EV+++++ IW+
Sbjct: 381 ITKSNSTHIASESSEDELGALSVSMTATLDTKGNLVLGSSREFKGFSREVDRSVVQCIWE 440
Query: 405 RAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
RA EF+P ++++ D N ++RIG RPYMPDGKPVI +P LS + +ATGHEG GL+L
Sbjct: 441 RAGEFFPAMKNVSF-DIDQNTQIRIGHRPYMPDGKPVIDFIPNLSNILIATGHEGSGLTL 499
Query: 465 ALGTAELVADMVLTNPLKVDSAPFAVQGR 493
ALGTAE+V DM+L NP KV +PF+++ R
Sbjct: 500 ALGTAEMVTDMILGNPGKVSYSPFSIKRR 528
>gi|224136938|ref|XP_002326982.1| predicted protein [Populus trichocarpa]
gi|222835297|gb|EEE73732.1| predicted protein [Populus trichocarpa]
Length = 312
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/310 (64%), Positives = 250/310 (80%), Gaps = 5/310 (1%)
Query: 130 MVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLK 189
MVH+ P S+ WDL +RS KLW+M A+ +R QGLDPLQ +GWK+TGSLL+G+T +E LK
Sbjct: 1 MVHKEPESDTWDLTMRSYKLWQMFAEKVRAQGLDPLQELGWKRTGSLLVGKTAKEAATLK 60
Query: 190 ERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRH 249
++VK+L EAGLRAEYL+S L EPEL VG+D AAFLP D QLDA AVA+I+K NRH
Sbjct: 61 KKVKRLSEAGLRAEYLTSDALRLKEPELEVGKDGGAAFLPDDCQLDAQRAVAFIQKANRH 120
Query: 250 FASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLR 309
F++KGRYAEF+HDPVT LLRS+S+ EVE V+T KNTLY KKA++VAAGCWSGSL+HDL R
Sbjct: 121 FSTKGRYAEFFHDPVTGLLRSDSSNEVEGVRTFKNTLYCKKAVIVAAGCWSGSLVHDLFR 180
Query: 310 ETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGH-HDL----TLHPGQVNHGQI 364
E++I+L++PVKPRKGHL+VLENF+S +L+H ME GYV H HD + H +V GQ
Sbjct: 181 ESDILLNVPVKPRKGHLVVLENFSSFRLDHGLMEMGYVDHLHDALDRKSSHSVKVEEGQT 240
Query: 365 LSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISN 424
S+SMTAT D +GNLVLGSSRQF G+NT+V+++II+ IWKRA EF+PKL++L L DF +
Sbjct: 241 PSVSMTATMDTMGNLVLGSSRQFTGYNTKVDESIINHIWKRAGEFFPKLKELPLEDFTLD 300
Query: 425 RKVRIGLRPY 434
RKVRIGLRPY
Sbjct: 301 RKVRIGLRPY 310
>gi|224132026|ref|XP_002321237.1| predicted protein [Populus trichocarpa]
gi|222862010|gb|EEE99552.1| predicted protein [Populus trichocarpa]
Length = 312
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/310 (64%), Positives = 249/310 (80%), Gaps = 5/310 (1%)
Query: 130 MVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLK 189
MVH+ P S+ WDL +RS KLW+M A+ +R QGLDPLQ +GWK+TGSLL+G+T +E LK
Sbjct: 1 MVHKEPESDTWDLTMRSYKLWQMFAEKVRAQGLDPLQELGWKRTGSLLVGKTAKEAATLK 60
Query: 190 ERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRH 249
++VK+L EAGLRAEYL+S L EPEL VG+D AAFLP D QLDA AVA+I+K NRH
Sbjct: 61 KKVKRLSEAGLRAEYLTSDALRLKEPELEVGKDGGAAFLPDDCQLDAQRAVAFIQKANRH 120
Query: 250 FASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLR 309
F++KGRYAEF+HDPVT LLRS+S+ EVE V+T KNTLY KKA++VAAGCWSGSL HDL R
Sbjct: 121 FSTKGRYAEFFHDPVTGLLRSDSSNEVEGVRTFKNTLYCKKAVIVAAGCWSGSLAHDLFR 180
Query: 310 ETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGH-HDL----TLHPGQVNHGQI 364
E++I+L++PVKPRKGHL+VLENF+S +L+H ME GYV H HD + H +V GQ
Sbjct: 181 ESDILLNVPVKPRKGHLVVLENFSSFRLDHGLMEMGYVDHLHDALDRKSSHSVKVEEGQT 240
Query: 365 LSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISN 424
S+SMTAT D +GNLVLGSSRQF G++T+V+++II+ IWKRA EF+PKL++L L DF +
Sbjct: 241 PSVSMTATMDTMGNLVLGSSRQFTGYSTKVDESIINHIWKRAGEFFPKLKELPLEDFTLD 300
Query: 425 RKVRIGLRPY 434
RKVRIGLRPY
Sbjct: 301 RKVRIGLRPY 310
>gi|194696922|gb|ACF82545.1| unknown [Zea mays]
Length = 376
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/371 (53%), Positives = 266/371 (71%), Gaps = 9/371 (2%)
Query: 130 MVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEELVML 188
M HRTPG++ W+LALRS +LW+ LA + QG + +GW +TGSLL+GR+ EEL L
Sbjct: 1 MSHRTPGTDTWELALRSKQLWEELATEVDGQGGGGAREKLGWMRTGSLLVGRSSEELGTL 60
Query: 189 KERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNR 248
ER K L +AG+ AE+LS+S L EP L VG+D A FLP D Q+DA AV+ IEK N
Sbjct: 61 DERTKALSQAGIHAEFLSASSLHALEPALSVGKDGGAMFLPQDCQIDAFQAVSLIEKTNN 120
Query: 249 HFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLL 308
++S+GRY EFY+DP L+RS+ TG+VEAVQTS+N LY +KA V+A+G W+ SL+H +
Sbjct: 121 SYSSEGRYREFYNDPAMSLIRSDVTGKVEAVQTSRNILYGRKAFVIASGAWTRSLLHSFV 180
Query: 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHH----DLTLHPGQVNHGQI 364
E + LDIPVKPRKGHLLVLE F+ +KLNHA ME GYV H + T + + ++
Sbjct: 181 -EPALTLDIPVKPRKGHLLVLEKFDKVKLNHALMEVGYVDHQITKSNSTHIASESSEDEL 239
Query: 365 --LSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFI 422
LS+SMTAT D GNLVLGSSR+F GF+ EV+++++ IW+RA EF+P ++++ D
Sbjct: 240 GALSVSMTATLDTKGNLVLGSSREFKGFSREVDRSVVQCIWERAGEFFPAMKNVSF-DID 298
Query: 423 SNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLK 482
N ++RIG RPYMPDGKPVI +P LS + +ATGHEG GL+LALGTAE+V DM+L NP K
Sbjct: 299 QNTQIRIGHRPYMPDGKPVIDFIPNLSNILIATGHEGSGLTLALGTAEMVTDMILGNPGK 358
Query: 483 VDSAPFAVQGR 493
V +PF+++ R
Sbjct: 359 VSYSPFSIKRR 369
>gi|238013482|gb|ACR37776.1| unknown [Zea mays]
Length = 372
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/371 (53%), Positives = 266/371 (71%), Gaps = 9/371 (2%)
Query: 130 MVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEELVML 188
M HRTPG++ W+LALRS +LW+ LA + QG + +GW +TGSLL+GR+ EEL L
Sbjct: 1 MSHRTPGTDTWELALRSKQLWEELATEVDGQGGGGAREKLGWMRTGSLLVGRSSEELGTL 60
Query: 189 KERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNR 248
ER K L +AG+ AE+LS+S L EP L VG+D A FLP D Q+DA AV+ IEK N
Sbjct: 61 DERTKALSQAGIHAEFLSASSLHALEPALSVGKDGGAMFLPQDCQIDAFQAVSLIEKTNN 120
Query: 249 HFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLL 308
++S+GRY EFY+DP L+RS+ TG+VEAVQTS+N LY +KA V+A+G W+ SL+H +
Sbjct: 121 SYSSEGRYREFYNDPAMSLIRSDVTGKVEAVQTSRNILYGRKAFVIASGAWTRSLLHSFV 180
Query: 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHH----DLTLHPGQVNHGQI 364
E + LDIPVKPRKGHLLVLE F+ +KLNHA ME GYV H + T + + ++
Sbjct: 181 -EPALTLDIPVKPRKGHLLVLEKFDKVKLNHALMEVGYVDHQITKSNSTHIASESSEDEL 239
Query: 365 --LSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFI 422
LS+SMTAT D GNLVLGSSR+F GF+ EV+++++ IW+RA EF+P ++++ D
Sbjct: 240 GALSVSMTATLDTKGNLVLGSSREFKGFSREVDRSVVQCIWERAGEFFPAMKNVSF-DID 298
Query: 423 SNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLK 482
N ++RIG RPYMPDGKPVI +P LS + +ATGHEG GL+LALGTAE+V DM+L NP K
Sbjct: 299 QNTQIRIGHRPYMPDGKPVIDFIPNLSNILIATGHEGSGLTLALGTAEMVTDMILGNPGK 358
Query: 483 VDSAPFAVQGR 493
V +PF+++ R
Sbjct: 359 VSYSPFSIKRR 369
>gi|50725352|dbj|BAD34424.1| unknown protein [Oryza sativa Japonica Group]
Length = 372
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/374 (54%), Positives = 262/374 (70%), Gaps = 15/374 (4%)
Query: 130 MVHRTPGSEIWDLALRSNKLWKMLA---DSLRDQGLDPLQVIGWKQTGSLLIGRTPEELV 186
M HRTPGS+ W+LA+RS +LW+ LA D L G + +GW +TGSLL+GRT EE+
Sbjct: 1 MSHRTPGSDTWELAVRSKQLWEELAAEVDGLGGGGAR--ERLGWMRTGSLLVGRTSEEMA 58
Query: 187 MLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKG 246
L+ER K L +AG+RAE LS++ L EPEL VG D A FLP D Q+DA AV+ IEK
Sbjct: 59 TLEERTKALSQAGIRAECLSAASLHALEPELYVGHDGGAMFLPEDCQIDAFQAVSLIEKT 118
Query: 247 NRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHD 306
N ++S+GRY E Y+DP L+RS +TG V+ VQTSK+ LY +KAIV+A+G W+ +L+
Sbjct: 119 NGSYSSEGRYMEIYNDPAMSLVRSETTGTVQGVQTSKHILYGRKAIVIASGAWTRTLLRS 178
Query: 307 LLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHH-------DLTLHPGQV 359
L E LDIPV PRKGHLLVL+ F+ LKLNH ME GYVGH L+ +
Sbjct: 179 FL-EPNPTLDIPVMPRKGHLLVLDKFDKLKLNHGLMELGYVGHQVAKSSGTPLSSESSED 237
Query: 360 NHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLA 419
HG LSISMTAT + GNL+LGSSR+F GF+ EV+ +I+ IW RAAEF+P L+++ L
Sbjct: 238 EHGA-LSISMTATMNTKGNLILGSSREFKGFSREVDMSILKCIWDRAAEFFPTLKNVHL- 295
Query: 420 DFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN 479
D N ++RIG RP+MPDGKPVIG VP L V +ATGHEG GL+LALGTAE+V DM+L N
Sbjct: 296 DIDENTEIRIGHRPFMPDGKPVIGSVPDLPNVLIATGHEGSGLALALGTAEMVTDMILGN 355
Query: 480 PLKVDSAPFAVQGR 493
P KVD +PF+++ R
Sbjct: 356 PGKVDFSPFSIKDR 369
>gi|168013962|ref|XP_001759532.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689462|gb|EDQ75834.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 442
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/431 (45%), Positives = 272/431 (63%), Gaps = 18/431 (4%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
FDV+++GAGIIGLT+A ++L + SV VVD PC+GATGAGQGY+W+ HR P S+ W
Sbjct: 3 FDVVVVGAGIIGLTVANRILEETRFSVVVVDAKRPCAGATGAGQGYVWLNHRNPASKTWG 62
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
LA RS LW+ L L D G DPL IGW+ TGSLL+ + EE L+ V + AG+
Sbjct: 63 LAHRSKLLWEQLVADLADAGSDPLSAIGWQNTGSLLVANSVEEARGLQAHVGAMATAGVD 122
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYH 261
AE+L++S+L + EP L VG + AAF+P DSQ+DA LAV + K N + +GRY E +
Sbjct: 123 AEFLTASELQKIEPSLKVGHEGGAAFVPGDSQIDAALAVEFFRKRNLAYRVEGRYMELFD 182
Query: 262 DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
PV L RS++ G +E VQTS++ L S++A++VAAG WS +++ +E + L PVKP
Sbjct: 183 SPVEELYRSSADGSIEVVQTSRHKLRSREAVIVAAGAWSPNILTRAAQEWRLPLIPPVKP 242
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILS--------------- 366
RKGHLLVLE SLK+NH ME Y ++ T H Q + + +S
Sbjct: 243 RKGHLLVLEGLPSLKINHGLMEFEYTANYT-TAHSTQCSQPEDVSTPSLVTDPTVISHDS 301
Query: 367 --ISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISN 424
++MTA+TD G L+LGSSR+F+GF+T I+ I RA+E++P L+D+ + D +
Sbjct: 302 FRVAMTASTDKSGRLLLGSSREFSGFSTAHHYEAIEGILSRASEYFPALKDISVEDVLEK 361
Query: 425 RKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVD 484
+ +R GLRPY G P++GPVPG+ ++ LATGHEG GL +ALGTAE++ +L D
Sbjct: 362 QTIRTGLRPYAFGGVPLVGPVPGVERLMLATGHEGSGLCMALGTAEMLVTRLLGKETVFD 421
Query: 485 SAPFAVQGRCC 495
P+ R C
Sbjct: 422 VDPYLPASRLC 432
>gi|302763367|ref|XP_002965105.1| hypothetical protein SELMODRAFT_227510 [Selaginella moellendorffii]
gi|300167338|gb|EFJ33943.1| hypothetical protein SELMODRAFT_227510 [Selaginella moellendorffii]
Length = 402
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/399 (43%), Positives = 244/399 (61%), Gaps = 17/399 (4%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP-CSGATGAGQGYIWMVHRTPGSEIWD 141
DV+I GAGIIGL+IA + L ++LSV VV+ C+GATGAGQGYIW H P S+ WD
Sbjct: 5 DVVIAGAGIIGLSIANRFLRQTNLSVTVVEAAHKICAGATGAGQGYIWSGHLNPDSKTWD 64
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
+ RS +LW ++ G+DPL+ IGW+ TGSLL EE + L R+ ++ AG++
Sbjct: 65 FSRRSIQLWHEFVAEIQASGVDPLEKIGWRDTGSLLFTTGGEESLALHNRLHKVAAAGVQ 124
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYH 261
E+ +S AEP L++G + AAF P D Q+DA AV +I++ NR GRY E +
Sbjct: 125 VEFWNSHTAQTAEPALVLGPEGAAAFFPADCQIDARAAVEFIQQENRALGPGGRYKEVFG 184
Query: 262 DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
PVT RS + ++ +QT L+SK+A++VAAG WS L+ L + ++ L ++P
Sbjct: 185 SPVTGFRRSPADRYMQGLQTLNGDLHSKRAVIVAAGAWSSDLLEILSKRFDLDLTPSIRP 244
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILS---ISMTATTDVIGN 378
RKGHLLV++ L LN+ +ME Y N + L ++ TAT D GN
Sbjct: 245 RKGHLLVVDKTAGLHLNYGTMEFAYTSTK---------NSKETLDEFGVATTATVDPAGN 295
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
++LGSSR+F GF+ ++ +I +I RAA+F+P L + L S+ R GLRPY P G
Sbjct: 296 VLLGSSREFKGFDITPDEAVIQQILHRAAKFFPALASVPL----SSIHPRTGLRPYTPGG 351
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
P+IGP+ L +FLA+GHEG GLSLALGTAE++ D ++
Sbjct: 352 VPLIGPIVELPGLFLASGHEGSGLSLALGTAEMIVDTIM 390
>gi|302757537|ref|XP_002962192.1| hypothetical protein SELMODRAFT_140766 [Selaginella moellendorffii]
gi|300170851|gb|EFJ37452.1| hypothetical protein SELMODRAFT_140766 [Selaginella moellendorffii]
Length = 402
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 170/399 (42%), Positives = 241/399 (60%), Gaps = 17/399 (4%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP-CSGATGAGQGYIWMVHRTPGSEIWD 141
DV+I GAGIIGL+IA + L ++LSV VV+ C+GATGAGQGYIW H P S+ WD
Sbjct: 5 DVVIAGAGIIGLSIANRFLRQTNLSVTVVEAAHKICAGATGAGQGYIWSGHLNPDSKTWD 64
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
+ RS +LW +R G+DPL+ IGW+ TGSLL EE + L R+ ++ AG++
Sbjct: 65 FSRRSIQLWHEFVAEIRASGVDPLEKIGWRDTGSLLFTTGGEESLALHNRLHKVAAAGVQ 124
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYH 261
E+ +S AEP L++G + AAF P D Q+DA V +I++ NR GRY E +
Sbjct: 125 GEFWNSHTAQTAEPALVLGPEGAAAFFPADCQIDARATVEFIQQENRALGPGGRYKEVFG 184
Query: 262 DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
PVT L S + ++ +QT +SK+A++V+AG WS L+ L + ++ L ++P
Sbjct: 185 SPVTGFLWSPADKYMQGLQTLNGDFHSKRAVIVSAGAWSSDLLEILSKRFDLDLTPSIRP 244
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILS---ISMTATTDVIGN 378
RKGHLLV++ L LN+ +ME Y N + L ++ TAT D GN
Sbjct: 245 RKGHLLVVDKTAGLHLNYGTMEFAYTSTK---------NSKETLDEFGVATTATVDPAGN 295
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+LGSSR+F GF+ ++ +I +I RAA+F+P L + L S+ R GLRPY P G
Sbjct: 296 FLLGSSREFKGFDMTPDEAVIQQILHRAAKFFPALASVPL----SSIHPRTGLRPYTPGG 351
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
P+IGP+ L +FLA+GHEG GLSLALGTAE++ D ++
Sbjct: 352 VPLIGPIVELPGLFLASGHEGTGLSLALGTAEMIVDTIM 390
>gi|51969054|dbj|BAD43219.1| putative protein [Arabidopsis thaliana]
gi|62321726|dbj|BAD95351.1| hypothetical protein [Arabidopsis thaliana]
Length = 192
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 124/193 (64%), Positives = 151/193 (78%), Gaps = 2/193 (1%)
Query: 304 MHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQ 363
MH+LL++ I LD+PVKPRKGHLLV+ENF+S LNH MEAGY H ++ V+ +
Sbjct: 1 MHELLKDCNIPLDVPVKPRKGHLLVVENFDSFHLNHGIMEAGYSNHQSASVSGLDVDE-R 59
Query: 364 ILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFIS 423
+LSISMTAT D GNLVLGSSR+F GF+TE ++ II IW+RAAEF+PKLRD+ L DFI
Sbjct: 60 MLSISMTATMDTSGNLVLGSSREFVGFDTEADEFIIRCIWERAAEFFPKLRDISLEDFIR 119
Query: 424 NRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKV 483
NRKVR+GLRPYMPDGKPVIG VPGL ++LA GHEG GLS+AL TAE+V DMVL P +V
Sbjct: 120 NRKVRVGLRPYMPDGKPVIGSVPGLQNMYLAAGHEGGGLSMALATAEMVTDMVLGKPSQV 179
Query: 484 DSAPFAVQG-RCC 495
D++ F V+G RCC
Sbjct: 180 DTSTFGVKGRRCC 192
>gi|224129910|ref|XP_002320701.1| predicted protein [Populus trichocarpa]
gi|222861474|gb|EEE99016.1| predicted protein [Populus trichocarpa]
Length = 159
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/159 (67%), Positives = 126/159 (79%), Gaps = 5/159 (3%)
Query: 342 MEAGYVGH-HDL----TLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
ME GYV H HD + H +V GQ S+SMTAT D +GNLVLGSSRQF G++T+V++
Sbjct: 1 MEMGYVDHLHDALDRKSSHSVKVEEGQTPSVSMTATMDTMGNLVLGSSRQFTGYSTKVDE 60
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+II+ IWKRA EF+PKL++L L DF +RKVRIGLRPYMPDGKPVIGPVPGL V +ATG
Sbjct: 61 SIINHIWKRAGEFFPKLKELPLEDFTLDRKVRIGLRPYMPDGKPVIGPVPGLMNVIIATG 120
Query: 457 HEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGRCC 495
HEG GLS+ALGTAE+VADMVL NP VD A FA+QGRCC
Sbjct: 121 HEGGGLSMALGTAEMVADMVLGNPGIVDLAAFALQGRCC 159
>gi|302840275|ref|XP_002951693.1| oxidoreductase [Volvox carteri f. nagariensis]
gi|300262941|gb|EFJ47144.1| oxidoreductase [Volvox carteri f. nagariensis]
Length = 478
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 138/426 (32%), Positives = 204/426 (47%), Gaps = 45/426 (10%)
Query: 90 GIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKL 149
GI+GL A++LL + LSV ++++ C+GATGAGQGY+WM HR PGS W LA RS L
Sbjct: 30 GIVGLFAAQELLR-NQLSVLLLERKGLCAGATGAGQGYLWMAHRAPGSVGWALAARSLAL 88
Query: 150 WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSD 209
W+ + D+GL + I W+ GSLL+ P E L ER L GL+A YL
Sbjct: 89 WRRRVQA--DEGLR--EAIEWQDCGSLLVSTGPGENTALSERQLALNAVGLKASYLDPRR 144
Query: 210 LLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLR 269
L Q EP L+ + D Q++ A + + R G + + L
Sbjct: 145 LAQIEPGLVPPGGGGGLLVQSDLQINGRAAAHTLLQRCRADPGFGDLMGPEGEVLGLELS 204
Query: 270 SNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVL 329
+ +G V+TS ++++ A+V++AG W+G L+ + V ++PR+GHLL +
Sbjct: 205 AGPSGG-HVVKTSGRRIHARHALVLSAGVWTGGLLSAA--TGDPVWAQLLQPRRGHLLEM 261
Query: 330 ENFNSL-KLNHASMEAGYVGHHDLTLHPGQVNHG-----------------QILSISMTA 371
++ + H ME Y H+ P + I+ TA
Sbjct: 262 PRPAAMPPVTHGMMEMSYTKHYATASAPKAAAPAASSPSSSASSSSSASPREPADITFTA 321
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCL------------- 418
TT G+L++GSSR+ ++T II I +R+A F P L+D
Sbjct: 322 TTGASGSLLIGSSRESGEWDTSPSPAIIAAILQRSALFLPGLKDAAAAATAAAAAVADGK 381
Query: 419 ------ADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELV 472
++ VR+GLRPY G P+IGPV G +F+A GHEG GL +A GT EL+
Sbjct: 382 PDDSAGGGALAGLSVRVGLRPYALGGLPLIGPVEGAPGLFVAAGHEGSGLCMAPGTGELL 441
Query: 473 ADMVLT 478
+ T
Sbjct: 442 VRHIRT 447
>gi|147859170|emb|CAN83938.1| hypothetical protein VITISV_042336 [Vitis vinifera]
Length = 275
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/137 (62%), Positives = 105/137 (76%), Gaps = 2/137 (1%)
Query: 358 QVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLC 417
QV ++ S T ++G GSSRQF+GF+T V++ I+D IW+RA F+P L++L
Sbjct: 140 QVGIDEVQSRKEQLTCCLVGRW--GSSRQFSGFDTNVDEYILDHIWERARVFFPSLKELP 197
Query: 418 LADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
L DF +R+VR+GLRPYMPDGKP+IGPVPG S +FLATGHEG GLS+ALGTAE+V DMVL
Sbjct: 198 LNDFTRSREVRVGLRPYMPDGKPLIGPVPGFSNLFLATGHEGGGLSMALGTAEMVVDMVL 257
Query: 478 TNPLKVDSAPFAVQGRC 494
NP KVD APFAVQGRC
Sbjct: 258 GNPGKVDYAPFAVQGRC 274
>gi|442317803|ref|YP_007357824.1| glycine oxidase ThiO [Myxococcus stipitatus DSM 14675]
gi|441485445|gb|AGC42140.1| glycine oxidase ThiO [Myxococcus stipitatus DSM 14675]
Length = 378
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 200/414 (48%), Gaps = 58/414 (14%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
FD +I+G GI+G +A L G LSVA+V+ +G T G G++ +
Sbjct: 3 AFDCVIVGGGIVGAALADALSAGG-LSVALVEARSIGTGTTACGMGHLVAMDDNAA---- 57
Query: 141 DLALRS--NKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA 198
+LAL S LW+ L D L + + + G+L + EE+ + +V A
Sbjct: 58 ELALTSWSVSLWRELRDGLP-------RTVEYDACGTLWLAADDEEMAAVHTKVANYRAA 110
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFA--SKGRY 256
G+RAE L S L +AEP L G A +P D AV Y R FA ++ R
Sbjct: 111 GIRAEVLDSRALYEAEPSLAPGLVG-ALRVPDD-------AVLYPPVAARTFALRAQARG 162
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
A+ C +R G V + + + + +V+AAG S SL +L
Sbjct: 163 AQLM---TGCPVRELRPG---GVVLANGEVLAARQVVLAAGVASPSLCPEL--------- 207
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QILSISMTATTDV 375
P+ PRKGHLL+ S ++H +E GY+ + HG + S++ A V
Sbjct: 208 -PISPRKGHLLI-TGRGSPVVHHQLVELGYL----------KSAHGTEGASVAFNAQPRV 255
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G L+LGSSRQ + EV+ I++R+ KRAA F P L L +V GLRP
Sbjct: 256 TGQLLLGSSRQPGEGSREVDAAILERMLKRAAVFLPGLNGL------QALRVWTGLRPAS 309
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
PDG P++GP P ++LA GHEGLG++ A G+A LVAD +L +D +P++
Sbjct: 310 PDGLPLLGPHPEKPWLWLACGHEGLGITTATGSARLVADQMLGRMSAIDPSPYS 363
>gi|108758628|ref|YP_634331.1| FAD-dependent oxidoreductase [Myxococcus xanthus DK 1622]
gi|108462508|gb|ABF87693.1| oxidoreductase, FAD-dependent [Myxococcus xanthus DK 1622]
Length = 378
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 197/414 (47%), Gaps = 58/414 (14%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
FD +I+G GI+G +A +L +SVA+V+ +G T G G++ +
Sbjct: 3 AFDCVIVGGGIVGAALA-DVLSADGVSVALVEARSIGAGTTACGMGHLVAMDDNAA---- 57
Query: 141 DLALRS--NKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA 198
+LAL S LW+ LAD L + + + G+L + EE+ + +V A
Sbjct: 58 ELALTSWSVSLWRELADGLP-------RAVEYDACGTLWLAADDEEMAAVSAKVANYRAA 110
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFA--SKGRY 256
G+RAE L S+ L +AEP L G A D AV Y R FA ++ R
Sbjct: 111 GVRAEVLDSAALHEAEPALAPG--LVGALRVVDD------AVLYPPLAARTFALRAQARG 162
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
A LR S V S + + + IV+AAG S +L L
Sbjct: 163 ARLMTGSPVRELRPGS------VVLSHGEVLTARHIVLAAGVASPALCPGL--------- 207
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDV 375
P+ PRKGHLL+ + ++H +E GY+ + HG S++ A V
Sbjct: 208 -PISPRKGHLLITRRGAPV-VHHQLVELGYL----------KSAHGTDGASVAFNAQPRV 255
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G L+LGSSRQ EV+ +++R+ KRAA F P L D + +V GLRP
Sbjct: 256 TGQLLLGSSRQPGDATREVDAALLERMLKRAAMFLPGL------DGLQALRVWTGLRPAT 309
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
PDG P++GP P ++LA GHEGLG++ A G+A LVAD +L + +D+ P++
Sbjct: 310 PDGLPLLGPHPEKPWLWLACGHEGLGITTATGSARLVADQLLGHTSAIDARPYS 363
>gi|424060354|ref|ZP_17797845.1| hypothetical protein W9K_01468 [Acinetobacter baumannii Ab33333]
gi|404668306|gb|EKB36215.1| hypothetical protein W9K_01468 [Acinetobacter baumannii Ab33333]
Length = 367
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 185/409 (45%), Gaps = 51/409 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L L+ ++QT +L + +PEE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGHEL-------LEDCAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K H + + A+ H
Sbjct: 112 QLRNADEVHQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKFPH-KVQVQQAKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ ++P++P+
Sbjct: 170 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K AA+++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAADYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
G P V+LA GHEGLG++ A GTA L+A V +D PF Q
Sbjct: 313 GRHPAFQSVYLAVGHEGLGVTTATGTARLIASHVCGLTFDIDPEPFLPQ 361
>gi|425746778|ref|ZP_18864800.1| FAD dependent oxidoreductase [Acinetobacter baumannii WC-323]
gi|425484989|gb|EKU51388.1| FAD dependent oxidoreductase [Acinetobacter baumannii WC-323]
Length = 367
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 187/406 (46%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGI+G A +L LSV V+D + GAT AG G++ ++ +E+ L
Sbjct: 4 DVIVIGAGIVGAACAYEL-ARQGLSVLVLDARI--GGATAAGMGHL-VIMDDLEAEL-QL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L ++ ++Q +L + + EE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHALGKQLSEE-------CAYRQIPTLWLASSAEEMQVAEEKYQRLSAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ SS ++ Q EP L G L D L A A ++ K +
Sbjct: 112 QLWSSEEIRQLEPHLKQGVYGGLEVLD-DGILYAPCAAEWLLKQFPQQIQYQQ------S 164
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
VT + E VQ S + I++A G + T+ ++P++P+
Sbjct: 165 KVTVI-------EENRVQVSDGIWLEAEHIILANG----------IHVTDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + LK+ H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELKVQHTLVALAYAAS-------TQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K A +++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAVDYFPALADLNII------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A GTA+L+A + P +D PF
Sbjct: 313 GRHPAFRSVYLAVGHEGLGVTTATGTAKLIASHICRLPFGIDPEPF 358
>gi|421808723|ref|ZP_16244565.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC035]
gi|410415274|gb|EKP67064.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC035]
Length = 367
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 184/406 (45%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L + ++QT +L + +PEE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGHELSED-------CAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K H + + A+ H
Sbjct: 112 QLRNADEVHQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKFPH-KVQVQQAKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ ++P++P+
Sbjct: 170 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K AA+++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAADYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A GTA+L+A V +D PF
Sbjct: 313 GRHPAFQSVYLAVGHEGLGVTTATGTAKLIASHVCGLTFDIDPEPF 358
>gi|374366477|ref|ZP_09624556.1| FAD dependent oxidoreductase [Cupriavidus basilensis OR16]
gi|373101947|gb|EHP42989.1| FAD dependent oxidoreductase [Cupriavidus basilensis OR16]
Length = 383
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 198/409 (48%), Gaps = 56/409 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGI+G A +L G L V V+D GAT AG G++ M+ T DL
Sbjct: 9 DVIVIGAGIVGAACAFEL-AGHGLDVCVLDSRA--GGATHAGMGHLVMMDDTAAER--DL 63
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
S +LW+ LA RD + P ++Q G+L + E+ + ++R L G+
Sbjct: 64 CACSLRLWRELA---RD--MPP--GCAYRQCGTLWVASDAAEMDLARQRQDALRAQGIPC 116
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYI--EKGNRHFASKGRYAEFY 260
L + +L + EP L G + A + D+ + A +++ ++ +R
Sbjct: 117 ATLDAGELARQEPMLRAGL-AGALKVAGDAIVYAPAVASWLLAQRASR------------ 163
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
++ + + S E V + S A+VVA G ++ T+++ +P++
Sbjct: 164 ---ISLVQATVSAVEANHVTLADGRRLSATAVVVANG----------IQATQLLPALPIR 210
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
RKGHL++ E + + +NH +E GY +H S++ G L+
Sbjct: 211 ARKGHLVITERYPAC-VNHQLVELGYAA---------SAHHSDGTSVAFNVQPRPTGQLL 260
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF +T V+ ++ R+ +RA + P+L + + + G R PDG P
Sbjct: 261 IGSSRQFDSLDTAVDSQVMARMLQRATAYLPELAGM------NAIRCWTGFRAATPDGLP 314
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
++G PG ++LA GHEGLG++ A G+A L+A +VL + +D APF+
Sbjct: 315 IVGAHPGQPGLWLAVGHEGLGVTTAPGSARLLAALVLGHRAPIDPAPFS 363
>gi|260555490|ref|ZP_05827711.1| glycine oxidase ThiO [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|260412032|gb|EEX05329.1| glycine oxidase ThiO [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|452948956|gb|EME54428.1| oxidoreductase [Acinetobacter baumannii MSP4-16]
Length = 367
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 186/409 (45%), Gaps = 51/409 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L ++ ++QT +L + +PEE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGHELSEE-------CAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K H + + A+ H
Sbjct: 112 QLRNAEEIRQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKIPH-KVQVQQAKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ ++P++P+
Sbjct: 170 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAAS-------TQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K AA+++P L DL + + G R PDG P+I
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAADYFPALADLNVI------RAWTGFRAATPDGIPII 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
G P V+LA GHEGLG++ A GTA+L+A + +D PF Q
Sbjct: 313 GRHPTFQSVYLAVGHEGLGVTTATGTAKLIASHICGITFDIDPEPFLPQ 361
>gi|284034420|ref|YP_003384351.1| FAD dependent oxidoreductase [Kribbella flavida DSM 17836]
gi|283813713|gb|ADB35552.1| FAD dependent oxidoreductase [Kribbella flavida DSM 17836]
Length = 383
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 196/410 (47%), Gaps = 38/410 (9%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV+++GAG+IG A L + + V V+D+ P G T AG+G + + + PG E+ L
Sbjct: 3 DVVVVGAGMIGAACAEALSA-AGVDVLVLDRGTPAGGTTAAGEGNVLVSDKEPGPEL-QL 60
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
A+ S + W + L +Q D + W+ G L++ T + L++ Q EAG+ A
Sbjct: 61 AIASRQEWPKVLARLPEQVAD----VEWEPKGGLVVATT--DPAPLEKFAAQQREAGVDA 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ + EP L+ + AA+ P D+QL +LA + A + R E
Sbjct: 115 QLITPAEAFELEP-LLTRAVTTAAYYPEDAQLQPVLATTALLA-----AVRSRGGEVRSG 168
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
+R +TG V V+T L A+V A G W+G+ + E++ PR
Sbjct: 169 VTAVSVRRAATGRVIGVETDAG-LIDCVAVVNACGPWAGAFGAAVGGPIEVL------PR 221
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGNLVL 381
+G +LV + H +A YVG V G L S + G +++
Sbjct: 222 RGMILVTAPLPEC-VRHKVYDADYVG---------AVGSGDADLQTSTVVESTRSGTVLI 271
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
GSSR+ GF+ V+ ++ + ++A +P L D+ + + G RPY PD PV
Sbjct: 272 GSSRERIGFDDTVKVHVLRELARKAVGLFPFLADVAVI------RTYGGFRPYAPDHLPV 325
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
+GP P + ++ ATGHEG G+ LA T LV ++ + P VD PF V
Sbjct: 326 LGPDPRVPGLWHATGHEGAGIGLAASTGRLVTELFIGVPPHVDPEPFRVD 375
>gi|291301573|ref|YP_003512851.1| FAD dependent oxidoreductase [Stackebrandtia nassauensis DSM 44728]
gi|290570793|gb|ADD43758.1| FAD dependent oxidoreductase [Stackebrandtia nassauensis DSM 44728]
Length = 393
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 189/411 (45%), Gaps = 30/411 (7%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
+ DV+I+GAG+IG A L V V+D+ P G T AG+G + + + PG E+
Sbjct: 3 SVDVVIVGAGVIGAACAEALSAAGQ-RVLVLDRGSPTGGTTAAGEGNVLVSDKEPGPEL- 60
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
+LA S + W +L SLR++ L W G L++ + L + AG+
Sbjct: 61 ELAQESRRYWPLLLASLREELGAKLAEAEWDAKGGLVVALGETDATALAGFAETQRAAGV 120
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
A +S ++ + EP L G + A + P D+QL +LA + + A + R
Sbjct: 121 DARVISVDEVREREPHLTDGIRA-AVYYPEDAQLQPVLAASALLS-----AVRARGGAVR 174
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
+ ++++G V +V TS + S +A+V A G W+G I V
Sbjct: 175 GGVAVTGVGTDASGAVSSVNTSDGAI-SCRAVVNACGPWAGEFAR------AAGAPIAVL 227
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
PR+G +LV + + H +A YVG V+ L S + G ++
Sbjct: 228 PRRGMVLVTAPLPDV-VRHKVYDADYVG--------ATVSGDADLQTSTVVESTRAGTVL 278
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQ GF+ + ++ + ++A +P L ++ + + G RPY PD P
Sbjct: 279 IGSSRQRVGFDETIRVEVLRELARKAVGLFPVLGNVPV------MRAYGGFRPYTPDHLP 332
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
VIG P L ++ ATGHEG G+ LA T L+AD L +D PF V
Sbjct: 333 VIGADPRLPGLWHATGHEGAGIGLAAATGRLLADQFLGRESVLDPEPFRVD 383
>gi|169796423|ref|YP_001714216.1| oxidoreductase [Acinetobacter baumannii AYE]
gi|169149350|emb|CAM87234.1| putative oxidoreductase [Acinetobacter baumannii AYE]
Length = 372
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 185/409 (45%), Gaps = 51/409 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 9 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 63
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L + ++QT +L + +PEE+ + +E+ ++L G+R
Sbjct: 64 SHWSVQLWHELGHELSED-------CAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVRC 116
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K H + + A+ H
Sbjct: 117 QLRNADEVRQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKIPH-KVQVQQAKVIHI 174
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ ++P++P+
Sbjct: 175 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 212
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 213 KGHLAITDRYPELNVKHTLVALAYAAS-------TQATSG--ISVACNIQPRPTGQLFIG 263
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K AA+++P L DL + + G R PDG P+I
Sbjct: 264 SSRQFNTVDPTVEPEVFTRVLKEAADYFPALADLNVI------RAWTGFRAATPDGIPII 317
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
G P V+LA GHEGLG++ A GTA+L+A + +D PF Q
Sbjct: 318 GRHPTFQSVYLAVGHEGLGVTTATGTAKLIASHICGITFDIDPEPFLPQ 366
>gi|213156464|ref|YP_002318884.1| FAD dependent oxidoreductase [Acinetobacter baumannii AB0057]
gi|215483886|ref|YP_002326111.1| glycine oxidase [Acinetobacter baumannii AB307-0294]
gi|301347230|ref|ZP_07227971.1| putative oxidoreductase [Acinetobacter baumannii AB056]
gi|301597012|ref|ZP_07242020.1| putative oxidoreductase [Acinetobacter baumannii AB059]
gi|332855294|ref|ZP_08435799.1| FAD dependent oxidoreductase [Acinetobacter baumannii 6013150]
gi|332871629|ref|ZP_08440102.1| FAD dependent oxidoreductase [Acinetobacter baumannii 6013113]
gi|417574506|ref|ZP_12225360.1| FAD dependent oxidoreductase [Acinetobacter baumannii Canada BC-5]
gi|421644186|ref|ZP_16084671.1| FAD dependent oxidoreductase [Acinetobacter baumannii IS-235]
gi|421648330|ref|ZP_16088737.1| FAD dependent oxidoreductase [Acinetobacter baumannii IS-251]
gi|421660591|ref|ZP_16100780.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-83]
gi|421699497|ref|ZP_16139023.1| FAD dependent oxidoreductase [Acinetobacter baumannii IS-58]
gi|421799740|ref|ZP_16235730.1| FAD dependent oxidoreductase [Acinetobacter baumannii Canada BC1]
gi|213055624|gb|ACJ40526.1| FAD dependent oxidoreductase [Acinetobacter baumannii AB0057]
gi|213986635|gb|ACJ56934.1| Glycine oxidase [Acinetobacter baumannii AB307-0294]
gi|332727518|gb|EGJ58942.1| FAD dependent oxidoreductase [Acinetobacter baumannii 6013150]
gi|332731319|gb|EGJ62614.1| FAD dependent oxidoreductase [Acinetobacter baumannii 6013113]
gi|400210074|gb|EJO41044.1| FAD dependent oxidoreductase [Acinetobacter baumannii Canada BC-5]
gi|404571576|gb|EKA76634.1| FAD dependent oxidoreductase [Acinetobacter baumannii IS-58]
gi|408505997|gb|EKK07713.1| FAD dependent oxidoreductase [Acinetobacter baumannii IS-235]
gi|408515691|gb|EKK17274.1| FAD dependent oxidoreductase [Acinetobacter baumannii IS-251]
gi|408704086|gb|EKL49460.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-83]
gi|410409281|gb|EKP61214.1| FAD dependent oxidoreductase [Acinetobacter baumannii Canada BC1]
Length = 367
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 185/409 (45%), Gaps = 51/409 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L + ++QT +L + +PEE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGHELSED-------CAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K H + + A+ H
Sbjct: 112 QLRNADEVRQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKIPH-KVQVQQAKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ ++P++P+
Sbjct: 170 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAAS-------TQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K AA+++P L DL + + G R PDG P+I
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAADYFPALADLNVI------RAWTGFRAATPDGIPII 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
G P V+LA GHEGLG++ A GTA+L+A + +D PF Q
Sbjct: 313 GRHPTFQSVYLAVGHEGLGVTTATGTAKLIASHICGITFDIDPEPFLPQ 361
>gi|421626674|ref|ZP_16067502.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC098]
gi|408694991|gb|EKL40550.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC098]
Length = 367
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 183/406 (45%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L ++ ++QT +L + +PEE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGHELSEE-------CAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ + ++ Q EP L G D L A A ++ K H + + A+ H
Sbjct: 112 QLRNVDEVHQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKFPH-KVQVQQAKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ ++P++P+
Sbjct: 170 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K A +++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAVDYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A GTA+L+A + +D PF
Sbjct: 313 GQHPAFQSVYLAVGHEGLGVTTATGTAKLIASHICGLTFDIDPEPF 358
>gi|417547803|ref|ZP_12198885.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-18]
gi|417565631|ref|ZP_12216505.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC143]
gi|395557387|gb|EJG23388.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC143]
gi|400389552|gb|EJP52623.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-18]
Length = 367
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 183/406 (45%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLKAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L + ++QT +L + +PEE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGHELSED-------CAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K H + + A+ H
Sbjct: 112 QLRNADEVHQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKFPH-KVQVQQAKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S IV+A G + T+ ++P++P+
Sbjct: 170 ------------EENRVQLSDGKWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K AA+++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAADYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P ++LA GHEGLG++ A GTA+L+A + +D PF
Sbjct: 313 GQHPAFQSIYLAVGHEGLGVTTATGTAKLIASHICGITFDIDPEPF 358
>gi|119714350|ref|YP_921315.1| FAD dependent oxidoreductase [Nocardioides sp. JS614]
gi|119535011|gb|ABL79628.1| FAD dependent oxidoreductase [Nocardioides sp. JS614]
Length = 393
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 201/411 (48%), Gaps = 40/411 (9%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G AR+L + L+V VVD+ G T G+G + + + G+E+ D+
Sbjct: 4 DVVVIGAGIVGAACARRLAR-AGLAVTVVDRSAAAGGTTAHGEGNLLVSDKRAGAEL-DI 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
A S +LW+ L+ L D+ + +++ G L++ L E C+AG+RA
Sbjct: 62 AQYSAELWRQLSVELADELGPEFPPLEFEEKGGLVVATDERGAGPLVELAASQCQAGVRA 121
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E LSSS+ + EPEL + A P D+Q+ ++A + R ++ H
Sbjct: 122 EVLSSSEARRLEPELTPSTVA-AVHYPEDAQVQPVVAAEALLASARRAGAR----ILPHT 176
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
VT + S G + V T+ + + +V+AAG WS + L IPV PR
Sbjct: 177 EVTGPVLSEG-GRLGGVTTTAGPIRATH-VVLAAGPWSAGVASSL------GATIPVVPR 228
Query: 323 KGHLLVLENFNS--LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
+G +LV + + + G VG +D L V I TA+ G ++
Sbjct: 229 RGMVLVTTRMRHRIFRKVYDADYVGAVGSNDSDLQTSSV-------IESTAS----GTVL 277
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQ GF+ + +++ + ++A + +P LR S +V G RP+ PD P
Sbjct: 278 IGSSRQMIGFDDCLRVPVLEELARKAIDLFPFLRT------ASVMRVYGGFRPFTPDHLP 331
Query: 441 VIGP---VPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+IGP VPGL + A GHEG G+ LA T E++ +V VD++P+
Sbjct: 332 LIGPDVTVPGL---WHANGHEGAGIGLAPATGEILGALVAGERPAVDASPY 379
>gi|193077005|gb|ABO11754.2| hypothetical protein A1S_1326 [Acinetobacter baumannii ATCC 17978]
Length = 367
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 182/406 (44%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D V GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARV--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L + ++QT +L + +PEE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGHELSED-------CAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K H + + + H
Sbjct: 112 QLRNADEVHQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKFPH-KVQVQQTKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ ++P++P+
Sbjct: 170 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K A +++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAVDYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A GTA+L+A + +D PF
Sbjct: 313 GQHPAFQSVYLAVGHEGLGVTTATGTAKLIASHICGLTFDIDPEPF 358
>gi|424743465|ref|ZP_18171775.1| FAD dependent oxidoreductase [Acinetobacter baumannii WC-141]
gi|422943299|gb|EKU38321.1| FAD dependent oxidoreductase [Acinetobacter baumannii WC-141]
Length = 367
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 183/408 (44%), Gaps = 55/408 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L ++ ++QT +L + +PEE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGRGLSEE-------CAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRY--AEFY 260
+ ++ ++ Q EP L G D L A A ++ F K R A+
Sbjct: 112 QLRNAEEIRQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLN---QFPQKVRVQQAKVI 167
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H E VQ S T I++A G + T+ ++P++
Sbjct: 168 HI------------EENRVQLSDGTWLEAAHIILANG----------IHATDFFPELPIE 205
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHL + + + L + H + Y Q G +S++ G L
Sbjct: 206 PKKGHLAITDRYPELNVKHTLVALAYAAS-------TQATSG--ISVACNIQPRPTGQLF 256
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF + VE + R+ K A +++P L DL + + G R PDG P
Sbjct: 257 IGSSRQFNTVDPTVEPEVFTRVLKEATDYFPALADLNVI------RAWTGFRAATPDGIP 310
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
VIG P ++LA GHEGLG++ A GTA+L+A V +D PF
Sbjct: 311 VIGRHPAFQSIYLAVGHEGLGVTTATGTAKLIASHVCGLTFDIDPEPF 358
>gi|421664822|ref|ZP_16104958.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC110]
gi|408711993|gb|EKL57185.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC110]
Length = 367
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 183/406 (45%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L ++ ++QT +L + + EE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHGLGQELSEE-------CAYRQTPTLWLASSAEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K H + + A+ H
Sbjct: 112 QLRNADEVNQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKFPH-KVQVQQAKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ ++P++P+
Sbjct: 170 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K AA+++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAADYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A GTA L+A + +D PF
Sbjct: 313 GRHPAFQSVYLAVGHEGLGVTTATGTARLIASHICGLTFDIDPEPF 358
>gi|184157647|ref|YP_001845986.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ACICU]
gi|332872956|ref|ZP_08440918.1| FAD dependent oxidoreductase [Acinetobacter baumannii 6014059]
gi|384131735|ref|YP_005514347.1| Putative oxidoreductase [Acinetobacter baumannii 1656-2]
gi|384142735|ref|YP_005525445.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
MDR-ZJ06]
gi|385237049|ref|YP_005798388.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
TCDC-AB0715]
gi|387124391|ref|YP_006290273.1| glycine/D-amino acid oxidase, deaminating [Acinetobacter baumannii
MDR-TJ]
gi|416147930|ref|ZP_11602055.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
AB210]
gi|417568540|ref|ZP_12219403.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC189]
gi|417579321|ref|ZP_12230154.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-17]
gi|417873027|ref|ZP_12517907.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ABNIH2]
gi|417878843|ref|ZP_12523440.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ABNIH3]
gi|417881066|ref|ZP_12525424.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ABNIH4]
gi|421204345|ref|ZP_15661472.1| glycine/D-amino acid oxidase [Acinetobacter baumannii AC12]
gi|421534330|ref|ZP_15980604.1| glycine/D-amino acid oxidase [Acinetobacter baumannii AC30]
gi|421627609|ref|ZP_16068414.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC180]
gi|421687096|ref|ZP_16126825.1| FAD dependent oxidoreductase [Acinetobacter baumannii IS-143]
gi|421703175|ref|ZP_16142641.1| Putative oxidoreductase [Acinetobacter baumannii ZWS1122]
gi|421706898|ref|ZP_16146300.1| Putative oxidoreductase [Acinetobacter baumannii ZWS1219]
gi|421792005|ref|ZP_16228165.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-2]
gi|424052824|ref|ZP_17790356.1| hypothetical protein W9G_01513 [Acinetobacter baumannii Ab11111]
gi|424064307|ref|ZP_17801792.1| hypothetical protein W9M_01590 [Acinetobacter baumannii Ab44444]
gi|425753239|ref|ZP_18871128.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-113]
gi|445471761|ref|ZP_21452298.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC338]
gi|445485106|ref|ZP_21456983.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-78]
gi|183209241|gb|ACC56639.1| Glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
ACICU]
gi|322507955|gb|ADX03409.1| Putative oxidoreductase [Acinetobacter baumannii 1656-2]
gi|323517546|gb|ADX91927.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
TCDC-AB0715]
gi|332738859|gb|EGJ69724.1| FAD dependent oxidoreductase [Acinetobacter baumannii 6014059]
gi|333365198|gb|EGK47212.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
AB210]
gi|342231240|gb|EGT96052.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ABNIH3]
gi|342232300|gb|EGT97079.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ABNIH2]
gi|342239279|gb|EGU03689.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ABNIH4]
gi|347593228|gb|AEP05949.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
MDR-ZJ06]
gi|385878883|gb|AFI95978.1| glycine/D-amino acid oxidase, deaminating [Acinetobacter baumannii
MDR-TJ]
gi|395554835|gb|EJG20837.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC189]
gi|395568459|gb|EJG29133.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-17]
gi|398326135|gb|EJN42286.1| glycine/D-amino acid oxidase [Acinetobacter baumannii AC12]
gi|404565943|gb|EKA71105.1| FAD dependent oxidoreductase [Acinetobacter baumannii IS-143]
gi|404671169|gb|EKB39030.1| hypothetical protein W9G_01513 [Acinetobacter baumannii Ab11111]
gi|404673401|gb|EKB41193.1| hypothetical protein W9M_01590 [Acinetobacter baumannii Ab44444]
gi|407192668|gb|EKE63844.1| Putative oxidoreductase [Acinetobacter baumannii ZWS1122]
gi|407193032|gb|EKE64203.1| Putative oxidoreductase [Acinetobacter baumannii ZWS1219]
gi|408710995|gb|EKL56214.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC180]
gi|409987764|gb|EKO43943.1| glycine/D-amino acid oxidase [Acinetobacter baumannii AC30]
gi|410401208|gb|EKP53360.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-2]
gi|425498209|gb|EKU64293.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-113]
gi|444767330|gb|ELW91582.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-78]
gi|444771021|gb|ELW95157.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC338]
Length = 367
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 185/406 (45%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ +E+ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHL-VIMDDLDAEL-KL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L + ++QT +L + +PEE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGHELSED-------CAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ +S ++ Q EP L G D L A A ++ K H + + A+ H
Sbjct: 112 QLRNSDEVHQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKFPH-KVQVQQAKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ +P++P+
Sbjct: 170 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPVLPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K A +++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAVDYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P L V+LA GHEGLG++ A GTA+L+ + +D PF
Sbjct: 313 GRHPALESVYLAVGHEGLGVTTATGTAKLIVSHICGLTFDIDPEPF 358
>gi|375134291|ref|YP_004994941.1| FAD dependent oxidoreductase [Acinetobacter calcoaceticus PHEA-2]
gi|325121736|gb|ADY81259.1| FAD dependent oxidoreductase [Acinetobacter calcoaceticus PHEA-2]
Length = 367
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 185/408 (45%), Gaps = 55/408 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L ++ ++QT +L + +PEE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGHELSEE-------CAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPY--DSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
+ ++ ++ Q EP L + S L D L A A ++ K H + + A+
Sbjct: 112 QLRNADEVHQLEPHL---KQSLYGGLEVFDDGILYAPCAAEWLLKKIPH-KVQVQQAKVI 167
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H E VQ S T IV+A G + T+ ++P++
Sbjct: 168 HI------------EENRVQLSDGTWLGAAHIVLANG----------IHATDFFPELPIE 205
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHL + + + L + H + Y Q G +S++ G L
Sbjct: 206 PKKGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLF 256
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF + VE + R+ K AA+++P L DL + + G R PDG P
Sbjct: 257 IGSSRQFNTVDPTVEPEVFTRVLKEAADYFPALADLNVI------RAWTGFRAATPDGIP 310
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
VIG P V+LA GHEGLG++ A GTA L+ + +D PF
Sbjct: 311 VIGRHPAFQSVYLAVGHEGLGVTTATGTARLIVSHICGLTFDIDPEPF 358
>gi|403675806|ref|ZP_10937930.1| Putative oxidoreductase [Acinetobacter sp. NCTC 10304]
Length = 367
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 182/406 (44%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L + ++QT +L + +PEE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGHELSED-------CAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K H + + A+ H
Sbjct: 112 QLRNADEVHQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKFPH-KVQVQQAKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E +Q S T I++A G + T+ ++P++P+
Sbjct: 170 ------------EENRIQLSDGTWLEAAHIILANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K A +++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAVDYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A GTA+L+ V +D PF
Sbjct: 313 GRHPAFQSVYLAVGHEGLGVTTATGTAKLITSHVCGLTFDIDPEPF 358
>gi|417561174|ref|ZP_12212053.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC137]
gi|421197788|ref|ZP_15654957.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC109]
gi|421456145|ref|ZP_15905488.1| FAD dependent oxidoreductase [Acinetobacter baumannii IS-123]
gi|421633112|ref|ZP_16073755.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-13]
gi|421803539|ref|ZP_16239454.1| FAD dependent oxidoreductase [Acinetobacter baumannii WC-A-694]
gi|395523756|gb|EJG11845.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC137]
gi|395566294|gb|EJG27937.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC109]
gi|400211243|gb|EJO42206.1| FAD dependent oxidoreductase [Acinetobacter baumannii IS-123]
gi|408707831|gb|EKL53114.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-13]
gi|410412742|gb|EKP64593.1| FAD dependent oxidoreductase [Acinetobacter baumannii WC-A-694]
Length = 367
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 184/406 (45%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L ++ ++QT +L + + EE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGHELSEE-------CAYRQTPTLWLASSAEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K H + + A+ H
Sbjct: 112 QLRNADEVHQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKIPH-KVQVQQAKVIH- 168
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
++ N VQ S T IV+A G + T+ ++P++P+
Sbjct: 169 -----IKENR------VQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K A +++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAVDYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A GTA L+A + +D PF
Sbjct: 313 GRHPAFQSVYLAVGHEGLGVTTATGTARLIASHICGLTFDIDPEPF 358
>gi|445491044|ref|ZP_21459528.1| FAD dependent oxidoreductase [Acinetobacter baumannii AA-014]
gi|444765142|gb|ELW89446.1| FAD dependent oxidoreductase [Acinetobacter baumannii AA-014]
Length = 367
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 185/408 (45%), Gaps = 55/408 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L ++ ++QT +L + + EE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGHELSEE-------CAYRQTPTLWLASSAEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPY--DSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
+ ++ ++ Q EP L + S L D L A A ++ K H + + A+
Sbjct: 112 QLRNADEVHQLEPHL---KQSLYGGLEVFDDGILYAPCAAEWLLKKIPH-KVQVQQAKII 167
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H E VQ S T IV+A G + T+ ++P++
Sbjct: 168 HI------------EENRVQLSDGTWLEATHIVLANG----------IHATDFFPELPIE 205
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHL + + + L + H + Y Q G +S++ G L
Sbjct: 206 PKKGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLF 256
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF + VE + R+ K AA+++P L DL + + G R PDG P
Sbjct: 257 IGSSRQFNTVDPTVEPEVFTRVLKEAADYFPALADLNVI------RAWTGFRAATPDGIP 310
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
VIG P V+LA GHEGLG++ A GTA L+A V +D PF
Sbjct: 311 VIGRHPAFQSVYLAVGHEGLGVTTATGTARLIASHVCGLTFDIDPEPF 358
>gi|417546747|ref|ZP_12197833.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC032]
gi|421665693|ref|ZP_16105800.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC087]
gi|421671345|ref|ZP_16111318.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC099]
gi|400384635|gb|EJP43313.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC032]
gi|410382068|gb|EKP34623.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC099]
gi|410389959|gb|EKP42369.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC087]
Length = 367
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 183/406 (45%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L ++ ++QT +L + + EE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHGLGQELSEE-------CAYRQTPTLWLASSAEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K H + + A+ H
Sbjct: 112 QLRNADEVHQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKFPH-KVQVQQAKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ ++P++P+
Sbjct: 170 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQSTSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K A +++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAVDYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A GTA+L+A V +D PF
Sbjct: 313 GRHPAFQSVYLAVGHEGLGVTTATGTAKLIASHVCGLTFNIDPEPF 358
>gi|445443753|ref|ZP_21442699.1| FAD dependent oxidoreductase [Acinetobacter baumannii WC-A-92]
gi|444762416|gb|ELW86780.1| FAD dependent oxidoreductase [Acinetobacter baumannii WC-A-92]
Length = 367
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 186/406 (45%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ +E+ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHL-VIMDDLDAEL-KL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L ++ ++QT +L + + EE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGCELSEE-------CAYRQTPTLWLASSAEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K H + + A+ H
Sbjct: 112 QLRNAEEIRQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKIPH-KVQVQQAKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ ++P++P+
Sbjct: 170 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K AA+++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAADYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A GTA+L+ + +D PF
Sbjct: 313 GRHPAFESVYLAVGHEGLGVTTATGTAKLIVSHICGLTFDIDPEPF 358
>gi|299770654|ref|YP_003732680.1| putative oxidoreductase [Acinetobacter oleivorans DR1]
gi|298700742|gb|ADI91307.1| putative oxidoreductase [Acinetobacter oleivorans DR1]
Length = 367
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 187/408 (45%), Gaps = 55/408 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ +E+ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHL-VIMDDLDAEL-KL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L ++ ++QT +L + +PEE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGHELSEE-------CAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK--GRYAEFY 260
+ ++ ++ Q EP + G D L A A ++ K F K + A+
Sbjct: 112 QLRNAEEIRQLEPHIKHGLYGGLEVFD-DGILYAPCAAEWLLK---QFPQKIQVQQAKVI 167
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H E VQ S T IV+A G + T+ ++P++
Sbjct: 168 HI------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIE 205
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHL + + + L + H + Y Q G +S++ G L
Sbjct: 206 PKKGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLF 256
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF + VE + ++ K AA+++P L DL + + G R PDG P
Sbjct: 257 IGSSRQFNTVDPTVEPEVFTQVLKEAADYFPALADLNVI------RAWTGFRAATPDGIP 310
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
VIG P V+LA GHEGLG++ A GTA L+A V ++ PF
Sbjct: 311 VIGRHPAFQSVYLAVGHEGLGVTTATGTARLIASHVCGLTFDINPEPF 358
>gi|421694513|ref|ZP_16134135.1| FAD dependent oxidoreductase [Acinetobacter baumannii WC-692]
gi|404567975|gb|EKA73088.1| FAD dependent oxidoreductase [Acinetobacter baumannii WC-692]
Length = 367
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 182/406 (44%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L + ++QT +L + + EE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGHELSED-------CAYRQTPTLWLASSAEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K + + + A+ H
Sbjct: 112 QLRNAEEIRQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLK-KFPYKVQVQQAKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ ++P++P+
Sbjct: 170 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K A +++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAVDYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A GTA+L+A + +D PF
Sbjct: 313 GRHPAFQSVYLAVGHEGLGVTTATGTAKLIASHIFGLTFDIDPEPF 358
>gi|421652569|ref|ZP_16092925.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC0162]
gi|445457287|ref|ZP_21446432.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC047]
gi|408505088|gb|EKK06816.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC0162]
gi|444776867|gb|ELX00904.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC047]
Length = 367
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 182/406 (44%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L + ++QT +L + +PEE+ + +E+ ++L G+
Sbjct: 59 SHWSVQLWHELGHELSED-------CAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVCC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K + + + A+ H
Sbjct: 112 QLRNADEVHQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLK-KFPYKVQVQQAKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ ++P++P+
Sbjct: 170 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K A +++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAVDYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A GTA+L+A + +D PF
Sbjct: 313 GRHPAFQSVYLAVGHEGLGVTTATGTAKLIASHICGLTFDIDPEPF 358
>gi|425750832|ref|ZP_18868786.1| FAD dependent oxidoreductase [Acinetobacter baumannii WC-348]
gi|425484617|gb|EKU51017.1| FAD dependent oxidoreductase [Acinetobacter baumannii WC-348]
Length = 367
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 182/406 (44%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L + ++QT +L + +PEE+ + +E+ ++L G+
Sbjct: 59 SHWSVQLWHELGHELSED-------CAYRQTPTLWLASSPEEMQIAEEKYQRLTTQGVCC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K + + + A+ H
Sbjct: 112 QLRNADEVHQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLK-KFPYKVQVQQAKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ ++P++P+
Sbjct: 170 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K A +++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAVDYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A GTA+L+A + +D PF
Sbjct: 313 GRHPAFQSVYLAVGHEGLGVTTATGTAKLIASHICGLTFDIDPEPF 358
>gi|421787284|ref|ZP_16223643.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-82]
gi|410408178|gb|EKP60149.1| FAD dependent oxidoreductase [Acinetobacter baumannii Naval-82]
Length = 367
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 181/406 (44%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L + ++QT +L + + EE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHELGHELSED-------CAYRQTPTLWLASSAEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ ++ ++ Q EP L G D L A A ++ K H + + + H
Sbjct: 112 QLRNADEVHQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKFPH-KVQVQQTKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ ++P++P+
Sbjct: 170 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K A +++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAVDYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A GTA+L+A + +D PF
Sbjct: 313 GRHPAFQSVYLAVGHEGLGVTTATGTAKLIASHICGLTFDIDPEPF 358
>gi|421674446|ref|ZP_16114378.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC065]
gi|421693339|ref|ZP_16132982.1| FAD dependent oxidoreductase [Acinetobacter baumannii IS-116]
gi|404558488|gb|EKA63771.1| FAD dependent oxidoreductase [Acinetobacter baumannii IS-116]
gi|410384676|gb|EKP37184.1| FAD dependent oxidoreductase [Acinetobacter baumannii OIFC065]
Length = 367
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 181/406 (44%), Gaps = 51/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A +L L+V V+D + GAT AG G++ ++ L
Sbjct: 4 DAIVIGAGIVGAACAYEL-ARQGLNVQVLDARI--GGATAAGMGHLVIMDDLEAE--LKL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW L L ++ ++QT +L + + EE+ + +E+ ++L G+R
Sbjct: 59 SHWSVQLWHGLGQELSEE-------CAYRQTPTLWLASSAEEMQIAEEKYQRLTAQGVRC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ +S ++ Q EP L G D L A A ++ K H + + + H
Sbjct: 112 QLRNSDEVHQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKFPH-KVQVQQTKVIHI 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
E VQ S T IV+A G + T+ ++P++P+
Sbjct: 170 ------------EENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPIEPK 207
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHL + + + L + H + Y Q G +S++ G L +G
Sbjct: 208 KGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQLFIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE + R+ K A +++P L DL + + G R PDG PVI
Sbjct: 259 SSRQFNTVDPTVEPEVFTRVLKEAVDYFPALADLNVI------RAWTGFRAATPDGIPVI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A GTA ++A + +D PF
Sbjct: 313 GRHPAFQSVYLAVGHEGLGVTTATGTARVIASHICGLTFDIDPEPF 358
>gi|256395054|ref|YP_003116618.1| FAD dependent oxidoreductase [Catenulispora acidiphila DSM 44928]
gi|256361280|gb|ACU74777.1| FAD dependent oxidoreductase [Catenulispora acidiphila DSM 44928]
Length = 398
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 192/422 (45%), Gaps = 48/422 (11%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR 133
AS T DV++IGAG+IG A + LSV VVD G +GAG+G + + +
Sbjct: 4 AASGSRPTSDVVVIGAGMIGAACAFYAAR-AGLSVTVVDSGPVAGGTSGAGEGNLLVSDK 62
Query: 134 TPGSEIWDLALRSNKLWKMLA---DSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKE 190
PG E+ DLALRS +LW+ LA D G + ++ G L++ T + L+
Sbjct: 63 EPGPEL-DLALRSQELWRSLAAEDDGAFGAGFE------FEAKGGLVVAFTATDFEALQR 115
Query: 191 RVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHF 250
G+ AE + L + EP + E + + P D+Q+ LA A + K
Sbjct: 116 FAATQVPLGVVAEEVPGDRLAEFEP-YIAPELAGGFWYPQDAQVMPALATARLLK----- 169
Query: 251 ASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRE 310
AS R VT L+ S S G V V+T + ++ VV A + S +
Sbjct: 170 ASSARLR--LGSAVTGLVLSGS-GAVRGVRTVAGEIPAR--FVVNAAGFGASAIASFAGS 224
Query: 311 TEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGH---HDLTLHPGQVNHGQILSI 367
+PV+PR+G +LV E ++ + H A YV D L V G
Sbjct: 225 A-----LPVQPRRGFVLVTEPLPAM-VRHKVYSAAYVADVSSSDAALQSSAVVEGT---- 274
Query: 368 SMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKV 427
G +++G+SR+ G + + R+ + AE +P L D+ + ++
Sbjct: 275 -------PSGPVLIGASRERVGLDRRPSYDALGRLAAQGAELFPFLADVKV------QRY 321
Query: 428 RIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAP 487
G RPY+PD P IGP +S +F A GHEG G+ LA T EL+A M++ V + P
Sbjct: 322 YTGFRPYLPDHLPAIGPDLNVSGLFHACGHEGAGIGLAPATGELIASMLIGQRSPVAAEP 381
Query: 488 FA 489
FA
Sbjct: 382 FA 383
>gi|317126283|ref|YP_004100395.1| FAD dependent oxidoreductase [Intrasporangium calvum DSM 43043]
gi|315590371|gb|ADU49668.1| FAD dependent oxidoreductase [Intrasporangium calvum DSM 43043]
Length = 383
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 184/395 (46%), Gaps = 39/395 (9%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLA 143
V++IGAGI+G A L G V V+D+ SG T G+G I + + PG+E+ DLA
Sbjct: 4 VVVIGAGIVGAACAHDLARGG-ADVVVLDRGPVASGTTSRGEGNILVSDKGPGAEL-DLA 61
Query: 144 LRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAE 203
S W L D L G DP+++ ++ G +++ +PE L L+ + AG A
Sbjct: 62 RLSRDAWLELGDEL---GRDPMEL---EEKGGVVVASSPEGLDALEGFARSQRAAGTTA- 114
Query: 204 YLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKG-NRHFASKGRYAEFYHD 262
L DL EP L G + P D Q+ +LA A + + RH A R+
Sbjct: 115 -LDVDDLRSLEPHLAPGL-AGGVLYPEDMQVQPVLAAAAMLEAAQRHGA---RFVPGADA 169
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
L R TG + V+T + A+V AAG W G + L +PV PR
Sbjct: 170 RGAVLDR---TGRLTGVRTGTGEVIGADAVVNAAGTWGGEVGERLGGA------VPVLPR 220
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
+G +LV E + + H A YV + + L S G +++G
Sbjct: 221 RGFILVTEPLPPM-VRHKVYSADYVSN--------VASSDAGLETSCVVEGTRGGTILIG 271
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
+SR+ GF+T ++ +I + ++A +P L + L +V G RPY PD PVI
Sbjct: 272 ASRERVGFDTTLDVNVISILARQATALFPFLAGVNLL------RVYRGFRPYCPDHLPVI 325
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
GP P + +F A GHEG G+ LA GTA L+ +L
Sbjct: 326 GPDPRVPGLFHACGHEGAGIGLAPGTARLITQHIL 360
>gi|289661710|ref|ZP_06483291.1| D-amino acid oxidase [Xanthomonas campestris pv. vasculorum NCPPB
702]
gi|289668665|ref|ZP_06489740.1| D-amino acid oxidase [Xanthomonas campestris pv. musacearum NCPPB
4381]
Length = 425
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 200/433 (46%), Gaps = 75/433 (17%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR 133
+A+S ++D+I+IGAGI+G A L VA+V+ G+T A G++ +
Sbjct: 51 SAASTRRSYDLIVIGAGIVGAACAEAAAG-EGLRVAIVEPGPIGGGSTAAAMGHLVAMDD 109
Query: 134 TPGSEIWDLALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKER 191
P +LAL S +LW+ A L + + G+L + R EL + +
Sbjct: 110 DP----VELALSAYSLRLWERFAT---------LSEAEFSRCGTLWVARDARELAAVPAK 156
Query: 192 VKQLCEAGLRAEYLSSSDLLQAEPELMVG-------EDSRAAFLPYDSQLDAMLAVAYIE 244
+ +L AGL AE + ++ L EP+L++G D + P ++ LA +
Sbjct: 157 IARLATAGLHAEAIDAAQLYALEPQLVLGLAGGMRVPDEAVVYPPRVARHLVSLAC---K 213
Query: 245 KGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLM 304
G R FA + R A+ + AV+ + S +V SG +
Sbjct: 214 SGARLFAGR-RVAQL---------------QAHAVRLDDGQVLSGPVLVA-----SGVAL 252
Query: 305 HDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-Q 363
LL E + ++PRKGHL++ + L + H +E GY HG
Sbjct: 253 PQLLPE------LALRPRKGHLVITDRHPGL-IQHQLLELGY----------ADSAHGAD 295
Query: 364 ILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFIS 423
S++ G +++GSSRQF + + ++ ++ +RA + P LR+L
Sbjct: 296 DTSVAFNVQPRPTGQILIGSSRQFGEHDRALSMPVLQQMLQRAFVYLPVLREL------Q 349
Query: 424 NRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKV 483
+V GLRP PDG+P +G VPG V++A GHEGLG++ ALG+A ++ D +L +
Sbjct: 350 AIRVWTGLRPATPDGRPYLGAVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAI 409
Query: 484 DSAPF----AVQG 492
D AP+ AVQG
Sbjct: 410 DPAPYAPARAVQG 422
>gi|291005622|ref|ZP_06563595.1| secreted oxidoreductase [Saccharopolyspora erythraea NRRL 2338]
Length = 388
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 190/407 (46%), Gaps = 29/407 (7%)
Query: 85 IIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLAL 144
+++GAG+IG A + L L V V+D+ P +G T AG+G + + + PG E+ +LA
Sbjct: 1 MVVGAGVIGAACA-EALSARGLRVTVLDRGAPAAGTTAAGEGNVLVSDKAPGPEL-ELAK 58
Query: 145 RSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEY 204
S ++W L D LR + + L + W+ G +++ T E L E + A +RAE
Sbjct: 59 ASRRIWPELLDGLRAELGEALTGVEWEPKGGIVVATTDESAGPLVEFARAQRAAQVRAEV 118
Query: 205 LSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPV 264
++++ + EP L + A P D+QL +LA + A + R E
Sbjct: 119 ITAAQAAELEPHLTP-RVTAAVHYPDDAQLQPVLAATTLLA-----AVRARGGEVRPGVA 172
Query: 265 TCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKG 324
+ + G V V+T++ + A+V A G W+G ++ PR+G
Sbjct: 173 ALGVGRRADGSVAEVRTNRGAVPCG-AVVNACGPWAGEFAAVAGAPVAVL------PRRG 225
Query: 325 HLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSS 384
+LV + H +A YVG + G + L S + G +++GSS
Sbjct: 226 LVLVTGPLPEGTVRHKVYDADYVG----AVASGDAD----LQTSTVVESTRAGTVLIGSS 277
Query: 385 RQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGP 444
RQ AGF+ + ++ + ++A +P L D+ + + G RPY PD PVIG
Sbjct: 278 RQRAGFDETIRPRVLSELARKAVGLFPVLADVPVM------RAYGGFRPYAPDHLPVIGA 331
Query: 445 VPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
P ++ ++ ATGHEG G+ LA T L+A++ VD PF V
Sbjct: 332 DPRIAGLWHATGHEGAGIGLAAATGRLLAELFTGGEPVVDPEPFRVD 378
>gi|239991389|ref|ZP_04712053.1| putative secreted oxidoreductase [Streptomyces roseosporus NRRL
11379]
Length = 386
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 185/401 (46%), Gaps = 38/401 (9%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
+V+IIGAGI+G A + L V V+D+ +G T G+G I + + PG E+ +
Sbjct: 1 MEVVIIGAGIVGAACAFHAAS-AGLGVTVLDRGPVGAGTTSRGEGNILLSDKEPGPEL-E 58
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
LA S LW ++ L ++ ++ G L++ TPE L L + AG+R
Sbjct: 59 LARLSRDLWDEASEELGPHSVE------FENKGGLVVASTPEGLAALHAFAARQAAAGIR 112
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYH 261
E + +D + EP + G + P D+Q+ +LA A + + ++ R E
Sbjct: 113 TERVDHAD--EFEPHIAPGLPGGVHY-PQDAQVQPVLAAAGLLRAAVRRGARVRTGE--- 166
Query: 262 DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
+ + G + V+T+ + + A+V AAG W G + L EI+ P
Sbjct: 167 ---AVAAVTGTGGRITGVRTADGSALTADAVVNAAGTWGGEVGRRLGAPVEIL------P 217
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVL 381
R+G +LV E + + H A YV + + + L S G +++
Sbjct: 218 RRGFVLVTEPLPPM-IRHKVYSADYVAN--------VASSDEGLETSCVVEGTRAGTILI 268
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
G+SR+ GF+T + ++ + +A +P LRD+ L R R G RPY PD PV
Sbjct: 269 GASRERVGFDTAMNPDVVALLAAQACRLFPFLRDVHLL-----RAYR-GFRPYCPDHLPV 322
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLK 482
+GP P + V A GHEG G+ LA GT L+ +L P +
Sbjct: 323 VGPDPRVPGVLHACGHEGAGIGLAPGTGALITAQLLGRPWR 363
>gi|291448387|ref|ZP_06587777.1| secreted oxidoreductase [Streptomyces roseosporus NRRL 15998]
gi|291351334|gb|EFE78238.1| secreted oxidoreductase [Streptomyces roseosporus NRRL 15998]
Length = 388
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 185/401 (46%), Gaps = 38/401 (9%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
+V+IIGAGI+G A + L V V+D+ +G T G+G I + + PG E+ +
Sbjct: 3 MEVVIIGAGIVGAACAFHAAS-AGLGVTVLDRGPVGAGTTSRGEGNILLSDKEPGPEL-E 60
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
LA S LW ++ L ++ ++ G L++ TPE L L + AG+R
Sbjct: 61 LARLSRDLWDEASEELGPHSVE------FENKGGLVVASTPEGLAALHAFAARQAAAGIR 114
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYH 261
E + +D + EP + G + P D+Q+ +LA A + + ++ R E
Sbjct: 115 TERVDHAD--EFEPHIAPGLPGGVHY-PQDAQVQPVLAAAGLLRAAVRRGARVRTGE--- 168
Query: 262 DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
+ + G + V+T+ + + A+V AAG W G + L EI+ P
Sbjct: 169 ---AVAAVTGTGGRITGVRTADGSALTADAVVNAAGTWGGEVGRRLGAPVEIL------P 219
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVL 381
R+G +LV E + + H A YV + + + L S G +++
Sbjct: 220 RRGFVLVTEPLPPM-IRHKVYSADYVAN--------VASSDEGLETSCVVEGTRAGTILI 270
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
G+SR+ GF+T + ++ + +A +P LRD+ L R R G RPY PD PV
Sbjct: 271 GASRERVGFDTAMNPDVVALLAAQACRLFPFLRDVHLL-----RAYR-GFRPYCPDHLPV 324
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLK 482
+GP P + V A GHEG G+ LA GT L+ +L P +
Sbjct: 325 VGPDPRVPGVLHACGHEGAGIGLAPGTGALITAQLLGRPWR 365
>gi|348172623|ref|ZP_08879517.1| FAD dependent oxidoreductase [Saccharopolyspora spinosa NRRL 18395]
Length = 394
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 186/410 (45%), Gaps = 32/410 (7%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D++++GAGI+G A L + V V+D+ P +G T +G+G + + + PG+E+ L
Sbjct: 6 DIVVVGAGIVGAACAEALSAAGHV-VDVLDRDAPAAGTTASGEGNVLVSDKPPGAEL-RL 63
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
A S + W L SLR++ L + W+ G ++ T + L + EAG+ A
Sbjct: 64 AQASRRRWPELLRSLREE-LGDIADFEWEPKGGVVAATTVDGAEALAAFAAEQREAGVDA 122
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
L S + + EP L + A P D+Q+ +LA + + R R
Sbjct: 123 RVLPSGTVFELEPHLTR-RTTLAVHYPEDAQVQPVLAASALLAAVRRRGGTLRSGTA--- 178
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
T ++R G V V+T + L A+V A G WSG L I V PR
Sbjct: 179 -ATGVVRGRD-GRVTGVRTGSSVLPCG-AVVNACGPWSGELA------GAAGAPIAVLPR 229
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGNLVL 381
+G +LV + H +A YVG V G L S + G +++
Sbjct: 230 RGMILVTAPVPPGTVRHKVYDADYVG---------AVESGDAELQTSTVVESTRAGTVLI 280
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
GSSR+ GF+ V ++ I +AA +P L + + + G RPY PD PV
Sbjct: 281 GSSRERIGFDDTVRMHVLREIAGKAAALFPVLGRVPVM------RAYGGFRPYTPDHMPV 334
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
IG P + ++ ATGHEG G+ LA T +L+A++ P VD PF V
Sbjct: 335 IGADPRVPGLWHATGHEGAGVGLAAATGQLLAELFDGRPPHVDPEPFRVD 384
>gi|384418868|ref|YP_005628228.1| D-amino acid oxidase [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353461781|gb|AEQ96060.1| D-amino acid oxidase [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 412
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 191/424 (45%), Gaps = 67/424 (15%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR 133
+A+S ++D+I+IGAGI+G A L VA+V+ G+T A G++ +
Sbjct: 38 SATSTRRSYDLIVIGAGIVGAACAEAAAG-EGLRVAIVEPGPIGGGSTAAAMGHLVAMDD 96
Query: 134 TPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
P L+ S LW+ A L + + G+L + R EL + ++
Sbjct: 97 DPAE--LALSAYSLHLWERFAT---------LSNAEFSRCGTLWVARDAHELAAVPAKIA 145
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVG-------EDSRAAFLPYDSQLDAMLAVAYIEKG 246
+L AGL AE + ++ L EP+L+ G D + P ++ LA G
Sbjct: 146 RLATAGLHAEAIDAAQLYALEPQLVSGLAGGMRVPDEAVVYPPRVARHLVGLAC---TSG 202
Query: 247 NRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHD 306
R FA RS + + AV+ + S +V SG +
Sbjct: 203 ARLFAG----------------RSVAQLQAHAVRLDDGQVLSGPVLVA-----SGVSLPQ 241
Query: 307 LLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QIL 365
LL E + ++PRKGHL++ + L + H +E GY HG
Sbjct: 242 LLPE------LALRPRKGHLVITDRHPGL-IRHQLLELGYA----------DSAHGADDT 284
Query: 366 SISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNR 425
S++ G +++GSSRQF + + ++ ++ +RA + P LR+L
Sbjct: 285 SVAFNVQPRPTGQMLIGSSRQFGEHDRALSMPVLQQMLQRAFAYLPVLREL------QAI 338
Query: 426 KVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDS 485
+V GLRP PDG+P +G VPG V++A GHEGLG++ ALG+A ++ D +L +D
Sbjct: 339 RVWTGLRPATPDGRPYLGAVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAIDP 398
Query: 486 APFA 489
AP+A
Sbjct: 399 APYA 402
>gi|387905271|ref|YP_006335609.1| FAD dependent oxidoreductase [Burkholderia sp. KJ006]
gi|387580163|gb|AFJ88878.1| FAD dependent oxidoreductase [Burkholderia sp. KJ006]
Length = 376
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 190/410 (46%), Gaps = 57/410 (13%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T DV++IGAGI+G A +L L V VVD GATGAG G+ +V +
Sbjct: 5 TTDVVVIGAGIVGAACAHEL-AQRGLRVLVVDDA--SGGATGAGMGH--LVAMDDNAAEL 59
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
L+ S LW+ LAD + Q ++ G+L + E+ + + + L G+
Sbjct: 60 ALSHYSIGLWRALADQMP-------QGCAYRNCGTLWLAADANEMDLARAKQATLAAHGV 112
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E + ++ L + EP L G A +P D+ L A +A +++
Sbjct: 113 AGELIDAATLARLEPMLRAGLGG-ALKIPGDAILYAPVAASWL---------------LQ 156
Query: 261 HDPVTCLLRSNSTGEVEAVQT--SKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
P L R + A T S +TL +++ +VVA G + +L+ +L P
Sbjct: 157 RAPGVALRRDRAVAVDGASVTLASGDTLRAQR-VVVANGVAARALLPEL----------P 205
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + +++H +E GY + S++ G
Sbjct: 206 LRPKKGHLLITDRYPG-RVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQ 255
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++GSSRQF + VE ++ R+ +RAA + P+L DL + + G R PDG
Sbjct: 256 LLIGSSRQFDTDDARVEPPVLARMLRRAAGYLPELADL------NGIRAWTGFRSASPDG 309
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++G P V+LA GHEGLG++ A G+A LVA + +D P+
Sbjct: 310 LPLLGEHPARPGVWLAVGHEGLGVTTAPGSARLVAAAMTGERPPIDIEPY 359
>gi|188577548|ref|YP_001914477.1| D-amino acid oxidase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188522000|gb|ACD59945.1| D-amino acid oxidase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 378
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 191/424 (45%), Gaps = 67/424 (15%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR 133
+A+S ++D+I+IGAGI+G A L VA+V+ G+T A G++ +
Sbjct: 4 SATSTRRSYDLIVIGAGIVGAACAEAAAG-EGLRVAIVEPGPIGGGSTAAAMGHLVAMDD 62
Query: 134 TPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
P L+ S LW+ A L + + G+L + R EL + ++
Sbjct: 63 DPAE--LALSAYSLYLWERFAT---------LSNAEFSRCGTLWVARDAHELAAVPAKIA 111
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVG-------EDSRAAFLPYDSQLDAMLAVAYIEKG 246
+L AGL AE + ++ L EP+L+ G D + P ++ LA G
Sbjct: 112 RLATAGLHAEAIDAAQLYALEPQLVPGLAGGMRVPDEAVVYPPRVARHLVGLAC---TSG 168
Query: 247 NRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHD 306
R FA RS + + AV+ + S +V SG +
Sbjct: 169 ARLFAG----------------RSVAQLQAHAVRLDDGQVLSGPVLVA-----SGVSLPQ 207
Query: 307 LLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QIL 365
LL E + ++PRKGHL++ + L + H +E GY HG
Sbjct: 208 LLPE------LALRPRKGHLVITDRHPGL-IRHQLLELGYA----------DSAHGADDT 250
Query: 366 SISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNR 425
S++ G +++GSSRQF + + ++ ++ +RA + P LR+L
Sbjct: 251 SVAFNVQPRPTGQMLIGSSRQFGEHDRALSMPVLQQMLQRAFAYLPVLREL------QAI 304
Query: 426 KVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDS 485
+V GLRP PDG+P +G VPG V++A GHEGLG++ ALG+A ++ D +L +D
Sbjct: 305 RVWTGLRPATPDGRPYLGAVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAIDP 364
Query: 486 APFA 489
AP+A
Sbjct: 365 APYA 368
>gi|58582763|ref|YP_201779.1| D-amino acid oxidase [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84624639|ref|YP_452011.1| D-amino acid oxidase [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58427357|gb|AAW76394.1| D-amino acid oxidase [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84368579|dbj|BAE69737.1| D-amino acid oxidase [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 420
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 191/424 (45%), Gaps = 67/424 (15%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR 133
+A+S ++D+I+IGAGI+G A L VA+V+ G+T A G++ +
Sbjct: 46 SATSTRRSYDLIVIGAGIVGAACAEAAAG-EGLRVAIVEPGPIGGGSTAAAMGHLVAMDD 104
Query: 134 TPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
P L+ S LW+ A L + + G+L + R EL + ++
Sbjct: 105 DPAE--LALSAYSLYLWERFAT---------LSNAEFSRCGTLWVARDAHELAAVPAKIA 153
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVG-------EDSRAAFLPYDSQLDAMLAVAYIEKG 246
+L AGL AE + ++ L EP+L+ G D + P ++ LA G
Sbjct: 154 RLATAGLHAEAIDAAQLYALEPQLVPGLAGGMRVPDEAVVYPPRVARHLVGLAC---TSG 210
Query: 247 NRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHD 306
R FA RS + + AV+ + S +V SG +
Sbjct: 211 ARLFAG----------------RSVAQLQAHAVRLDDGQVLSGPVLVA-----SGVSLPQ 249
Query: 307 LLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QIL 365
LL E + ++PRKGHL++ + L + H +E GY HG
Sbjct: 250 LLPE------LALRPRKGHLVITDRHPGL-IRHQLLELGYA----------DSAHGADDT 292
Query: 366 SISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNR 425
S++ G +++GSSRQF + + ++ ++ +RA + P LR+L
Sbjct: 293 SVAFNVQPRPTGQMLIGSSRQFGEHDRALSMPVLQQMLQRAFAYLPVLREL------QAI 346
Query: 426 KVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDS 485
+V GLRP PDG+P +G VPG V++A GHEGLG++ ALG+A ++ D +L +D
Sbjct: 347 RVWTGLRPATPDGRPYLGAVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAIDP 406
Query: 486 APFA 489
AP+A
Sbjct: 407 APYA 410
>gi|134293389|ref|YP_001117125.1| FAD dependent oxidoreductase [Burkholderia vietnamiensis G4]
gi|134136546|gb|ABO57660.1| FAD dependent oxidoreductase [Burkholderia vietnamiensis G4]
Length = 376
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 190/410 (46%), Gaps = 57/410 (13%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T DV++IGAGI+G A +L L V VVD GATGAG G+ +V +
Sbjct: 5 TTDVVVIGAGIVGAACAHEL-AQRGLRVLVVDDA--SGGATGAGMGH--LVAMDDNAAEL 59
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
L+ S LW+ LAD + Q ++ G+L + E+ + + + L G+
Sbjct: 60 ALSHYSIGLWRALADQMP-------QGCAYRNCGTLWLAADAHEMDLARAKQATLAAHGV 112
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E + ++ L + EP L G A +P D+ L A +A +++
Sbjct: 113 AGELIDAATLARLEPMLRAGLGG-ALKIPGDAILYAPVAASWL---------------LE 156
Query: 261 HDPVTCLLRSNSTGEVEAVQT--SKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
P L R + A T S +TL +++ +VVA G + +L+ +L P
Sbjct: 157 RAPGVALRRDRAVAVDGASVTLASGDTLRAQR-VVVANGVAARALLPEL----------P 205
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + +++H +E GY + S++ G
Sbjct: 206 LRPKKGHLLITDRYPG-RVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQ 255
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++GSSRQF + VE ++ R+ +RAA + P+L DL + + G R PDG
Sbjct: 256 LLIGSSRQFDTDDARVEPPVLARMLRRAAGYLPELADL------NGIRAWTGFRSASPDG 309
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++G P V+LA GHEGLG++ A G+A LVA + +D P+
Sbjct: 310 LPLLGEHPARPGVWLAVGHEGLGVTTAPGSARLVAAAMTGERPPIDIEPY 359
>gi|380512722|ref|ZP_09856129.1| fad dependent oxidoreductase oxidoreductase [Xanthomonas sacchari
NCPPB 4393]
Length = 366
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 187/411 (45%), Gaps = 57/411 (13%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
FD+I++GAGI+G A + L VA+V+ G+T A G++ + P
Sbjct: 4 FDLIVVGAGIVGAACADAAAA-AGLRVAIVESGSIGGGSTAAAMGHLVAMDDDPAE--LA 60
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
L+ S +LW+ A PL + + G+L + R EL + ++++L AG+
Sbjct: 61 LSAYSLRLWEEFA---------PLPEAEFSRCGTLWVAREARELEAIPAKIQRLAAAGVH 111
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKG--RYAEF 259
AE L + L Q EP L+ G A AV Y + R+ + A+
Sbjct: 112 AEALDAQRLYQLEPALVPGLAG--------GMRVAAEAVVYPPRMARYLVERACAAGAQL 163
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
Y R+ + + + L+ ++VA GC E++ ++P+
Sbjct: 164 YAG-----RRATALADAGVRLDDGSALHGP--VLVATGCAV----------PELLPELPM 206
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGN 378
+ RKG L++ + + G+V H L L HG S++ G
Sbjct: 207 RARKGQLVITDRYP-----------GFVAHQLLELGYADSAHGSDGSSVAFNVQPRPTGQ 255
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+++GSSR+F + V ++ R+ +RA F P LR L +V GLRP PDG
Sbjct: 256 ILIGSSREFDATDRAVSMPMLQRMLERAFAFLPGLRQL------QAIRVWTGLRPATPDG 309
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
+P +G VP V++A GHEGLG++ ALG+A L+ D +L P +D AP+A
Sbjct: 310 RPYLGAVPERRDVWVAAGHEGLGVTTALGSARLLLDQLLQRPAAIDPAPYA 360
>gi|378716374|ref|YP_005281263.1| FAD-dependent oxidoreductase [Gordonia polyisoprenivorans VH2]
gi|375751077|gb|AFA71897.1| FAD-dependent oxidoreductase [Gordonia polyisoprenivorans VH2]
Length = 393
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 191/410 (46%), Gaps = 36/410 (8%)
Query: 85 IIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLAL 144
+I+GAGIIG +AR+L L V V+D+ P +G T G+G + + + PG E+ LA
Sbjct: 4 VIVGAGIIGCALAREL-ARLGLDVEVIDRGAPGAGTTAHGEGNVLVSDKGPGPELA-LAQ 61
Query: 145 RSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAE 203
S LW D + +Q G ++I ++ G +++ T L + + +AG+ A
Sbjct: 62 LSRTLWPSTIDEIDEQCGPQVGRLIEFEPKGGIVVATTDAGAQSLTDFAARQRQAGVAAT 121
Query: 204 YLSSSDLLQAEPELMVGEDSRAAFL-PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
LS ++ +AEP L D +AFL P D+Q+ + A + + F ++ R
Sbjct: 122 VLSHAEAHEAEPHLT--RDLASAFLYPEDAQVQPVGAAHALLFSAKGFGARVRVDTEVLA 179
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
PV + G + + TS + ++ AG W+ + + L I VKPR
Sbjct: 180 PVV------AHGRIVGIDTSTGRI-DADVVINCAGPWAADVSNRLGAP------IAVKPR 226
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGNLVL 381
+G +L+ + H +A YVG V G L S + G +++
Sbjct: 227 RGDVLI-TTPQPPTVFHKVYDADYVG---------AVGSGDADLQTSAVVESTAAGPILI 276
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
GSSR+ A +T + ++ + ++A +P L D + + G RPY+ D PV
Sbjct: 277 GSSRRRAPLDTGIRLDSLEGMARKAIRLFPGLAD------VEIMRCYGGFRPYVDDHLPV 330
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
IGP P LS ++ ATGHEG G+ L LGTA + +L +P + F V
Sbjct: 331 IGPDPRLSGLWHATGHEGAGIGLCLGTAVHLGAQLLGHPTPLPDNDFRVD 380
>gi|298241673|ref|ZP_06965480.1| FAD dependent oxidoreductase [Ktedonobacter racemifer DSM 44963]
gi|297554727|gb|EFH88591.1| FAD dependent oxidoreductase [Ktedonobacter racemifer DSM 44963]
Length = 374
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 190/410 (46%), Gaps = 53/410 (12%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
TFDV+I+GAGI+G A +L + SV +++ SGAT AG G+I ++ +P
Sbjct: 4 TFDVLIVGAGIVGTACALEL-AKAGCSVGILEGDTVGSGATAAGMGHIVVMDDSPAQ--L 60
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
L S LW L Q + + G++ + EE+ ++ + +
Sbjct: 61 ALTRHSQLLWDELVQEAPGQH-------EYTRCGTIWVAANAEEMQEIERKHSLYAAHTI 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYI-EKGNRHFASKGRYAEF 259
+ L ++ L + EP L G + +P DS + + ++ ++ +H A
Sbjct: 114 PSSILEATQLYELEPRLRPGL-AGGLLVPGDSVVYPPRSANWLLQQAQKHGA------RL 166
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
+ VT +L + V+ + S +V+A G ++ T +V +P+
Sbjct: 167 LYGQVTHVLN-------DGVRLEDGQVISGAKVVLANG----------VQATTLVPGLPI 209
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+P+KGHLL+ + + L H +E GYV + G ++S G +
Sbjct: 210 EPKKGHLLITDRYPGF-LRHQLVELGYVKN-------AHAASGD--TVSFNVQPRATGQI 259
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDL-CLADFISNRKVRIGLRPYMPDG 438
++GSSRQ + E+EQ+I+ +I A E+ P L + C+ + GLR PDG
Sbjct: 260 LIGSSRQPGVASREIEQSILAKILVGALEYLPDLGNCACI-------RAWTGLRAATPDG 312
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P+IGP P ++LATGHEGLG++ +L TA L+A +L P + P+
Sbjct: 313 LPLIGPYPERENIWLATGHEGLGITTSLSTAHLLAAQILARPSAIPWEPY 362
>gi|398946673|ref|ZP_10672185.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp.
GM41(2012)]
gi|398154598|gb|EJM43066.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp.
GM41(2012)]
Length = 371
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 184/411 (44%), Gaps = 58/411 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A Q L G L V V+D +P GAT AG G++ ++ P +L
Sbjct: 8 DVIVIGAGIIGAACA-QALAGRGLHVLVLDAGLP--GATAAGMGHLLVLDDNPA----EL 60
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL L W+ LA L D ++ G+L + EE+ + + L G+
Sbjct: 61 ALSQYSLHRWRELAPVLPDG-------CAYRCNGTLWLAANAEEMAVAHSKYLNLQAQGV 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E +SSS L Q EPEL G + + D L A ++ + R +E
Sbjct: 114 ACELISSSALHQREPELREGLEG-GLLINGDGILYAPATANWMLDTPNISQRRARVSEV- 171
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
+ V+ S +A+++A G ++ E+ ++P++
Sbjct: 172 --------------DGNRVRLDDGHWLSAEAVILANG----------VQANELCPELPIE 207
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + K+ H +E GYV P S + G L
Sbjct: 208 PKKGHLLITDRYPG-KVTHTLVELGYVTSAHNASGP---------STACNIQPRPTGQLF 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+G+SRQF N +VE ++ ++ +RA ++ P L L + + G R PDG P
Sbjct: 258 IGASRQFGTTNPQVEGWMLAKMLRRATDYMPGLAQL------NGIRAWTGFRAASPDGLP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
++G P ++LA GHEGLG++ A GTA+L+ + + + P+ Q
Sbjct: 312 LVGQHPQRKGLWLAVGHEGLGVTTAPGTADLLVAQLFDETPPLAAQPYLPQ 362
>gi|374322434|ref|YP_005075563.1| sarcosine oxidase subunit beta [Paenibacillus terrae HPL-003]
gi|357201443|gb|AET59340.1| sarcosine oxidase subunit beta [Paenibacillus terrae HPL-003]
Length = 402
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 184/382 (48%), Gaps = 47/382 (12%)
Query: 104 SDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLD 163
S L V + ++ G + G I + + PG + ++L S +L LA L D+
Sbjct: 27 SGLKVVLAERGELAGGTSSRCDGNILAIDKEPGFD-SRMSLVSQELVGELARELEDE--- 82
Query: 164 PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDS 223
++ GS+L+ +E++ ++ V + + GL L DL + P L
Sbjct: 83 ----FEYRAPGSILVCENDQEMLAAEQWVARQQQQGLPFRMLDQRDLQEEWPHL------ 132
Query: 224 RAAFLP------YDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
A LP DS ++ +L + R ++ P+ +L+ + G+V
Sbjct: 133 -AKDLPGGLECATDSTVNPVLMTYALAGAARRMGAR----LLPRTPIQSVLK-DERGDVR 186
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
V+T +++ A+V+AAG W+ S+ L L +P+KPRKGH+LV S+
Sbjct: 187 GVETPHGVIHAG-AVVLAAGVWTRSIGQSL------GLHLPIKPRKGHILVSARMPSIG- 238
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILS---ISMTATTDVIGNLVLGSSRQFAGFNTEV 394
N ME GY+ ++ GQ + +I +++ N+++GSSRQF G +T V
Sbjct: 239 NRKVMEFGYL----MSKFGGQRSVDEIYEKYGVALVFEPTASQNILIGSSRQFVGMDTGV 294
Query: 395 EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLA 454
+Q +I I +RA F+P L ++ L + GLRP+ PD P++ V + +F+A
Sbjct: 295 DQQVIRLIARRAIRFFPDLANVPLM------RAYTGLRPWTPDHLPIVSAVDEIPGLFIA 348
Query: 455 TGHEGLGLSLALGTAELVADMV 476
+GHEG G+SLA T +LV +MV
Sbjct: 349 SGHEGDGISLAAVTGKLVTEMV 370
>gi|315505119|ref|YP_004084006.1| fad dependent oxidoreductase [Micromonospora sp. L5]
gi|315411738|gb|ADU09855.1| FAD dependent oxidoreductase [Micromonospora sp. L5]
Length = 382
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 194/413 (46%), Gaps = 51/413 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAG+ G A + L+V VVD+ SG TGAG+G I + ++PG E+ L
Sbjct: 7 DVVVIGAGMTGAACAYYAAR-AGLTVTVVDRAGVASGTTGAGEGNILLSDKSPGPEL-SL 64
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
AL S LW+ L +++ D ++ ++ G L++ + E L + AG+ A
Sbjct: 65 ALHSVALWRELGETMGDAQIE------LERKGGLVVAASATEHDTLSAFADRQRAAGVEA 118
Query: 203 EYLSSSDLLQAEPEL---MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
++S +L EP L +VG A P D Q+ MLA A++ + R G
Sbjct: 119 HAVASHELPSYEPHLSPHLVG----AVHYPQDMQVQPMLAAAHLLRAARATVLTGTC--- 171
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
V LLR + TG + A +T L + + +V AAG W+G + +++P+
Sbjct: 172 ----VVGLLR-DGTGGIRAARTDHGLLSTTR-VVNAAGVWAGRV------AALAGVELPI 219
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
PR+G +LV + L + H AGYV + + + L IS G +
Sbjct: 220 LPRRGFVLVTQPLPEL-VRHKVYAAGYVANVERST--------AGLEISPVVEGTRAGTI 270
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++GSSR+ GF+ + + + A +P L +S + G RPY PD
Sbjct: 271 LIGSSREHVGFDPAMSLPALRGLAAAAIRLFPILGG------VSAIRAYRGFRPYSPDHL 324
Query: 440 PVIGP---VPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+IG VPGL F ATGHEG G+ LA T +A ++ VD PFA
Sbjct: 325 PIIGADKDVPGL---FHATGHEGAGIGLAPATGHAIAALLTDRRPHVDLRPFA 374
>gi|407938906|ref|YP_006854547.1| hypothetical protein C380_11040 [Acidovorax sp. KKS102]
gi|407896700|gb|AFU45909.1| hypothetical protein C380_11040 [Acidovorax sp. KKS102]
Length = 371
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 192/416 (46%), Gaps = 58/416 (13%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEI 139
T DV++IGAGI+G A L V + LSV ++D + GAT AG G++ ++ P
Sbjct: 2 QTTDVLVIGAGIVGAACAHSL-VQAGLSVRIIDARL--GGATAAGMGHLVVMDDNPA--- 55
Query: 140 WDLALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCE 197
+LAL + L W LA + D G + G+L + EEL+ + L
Sbjct: 56 -ELALSKSSLDLWHALAPQM-DAG------CAFTACGTLWLAANEEELLAAHAKRATLQA 107
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAY-IEKGNRHFASKGRY 256
G+ E L + L +AEP L G + A + DS + A A + + + H +
Sbjct: 108 QGVACEMLDAVALARAEPALRRGL-AGALKVNGDSVVYAPRAAQWLVAQAAAHGSVVFEQ 166
Query: 257 AEFYH-DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
AE D T LR S S AIV+ +G ++ ++
Sbjct: 167 AEAAQIDGHTVTLRDGSQ-------------RSAGAIVLTSG----------IQAPQLCP 203
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+P++P+KGHL++ + + ++H +E GY+ +H S++
Sbjct: 204 GLPLRPKKGHLVITDRYPG-TVHHQLVELGYIT---------SAHHSDGTSVAFNVQPRP 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G L++GSSR+F + V T++ R+ +RA + P L DL + + G R
Sbjct: 254 TGQLLIGSSREFDTTDPAVNNTVLARMLQRALTYLPGLADL------NAIRTWTGFRAAT 307
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
PD P+IGP+P ++LA GHEGLG++ A TA+L+A + + +D P+A Q
Sbjct: 308 PDSLPIIGPLPVHPHLWLAVGHEGLGVTTAPATAQLLAAQITGSTPPIDPMPYAAQ 363
>gi|225572690|ref|ZP_03781445.1| hypothetical protein RUMHYD_00879 [Blautia hydrogenotrophica DSM
10507]
gi|225039926|gb|EEG50172.1| FAD dependent oxidoreductase [Blautia hydrogenotrophica DSM 10507]
Length = 394
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 190/381 (49%), Gaps = 51/381 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K CSG+ GA G + + PG ++ +LA+RS +++ L+ L G+D +
Sbjct: 29 VLMIEKKDNCSGSAGASDGVVGYHTKKPGLQM-ELAIRSIAMFEELSKEL---GMD---I 81
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL---MVGEDSR 224
K G + T E +L E VK+ ++G+ +S + + EP+L + G
Sbjct: 82 EYRKDCGGMQPAETKLEWEILSEIVKEQRQSGVDIRMISIEEACKIEPQLNPDLYG---- 137
Query: 225 AAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
A + P +++ + L AY++ R A + VT +L G V V+TSK
Sbjct: 138 ALYSPTSGKVNPIRLTFAYVQAAKRLGAQV-----LSNTEVTDVL--VKMGRVMGVETSK 190
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLEN---FNSLKLNHA 340
T Y+ + ++ AAG W+ + +D+P++PRKG L + E F + L A
Sbjct: 191 GTYYADQ-VIDAAGSWAAEIA------AMAGVDLPIRPRKGQLFITEPLGPFMDVTLQCA 243
Query: 341 SMEAGYVGHHDLTLHPGQVNHGQIL----SISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
++ + P V +L S+S+ T + G LV+GS+R+F G++ E
Sbjct: 244 R-------YNVIKFKPEAVGDKAVLRMGASLSIEQTEN--GGLVIGSTREFVGYDRENTL 294
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
++ +RA F+P L+D+ + + GLRP+ PDG PVIG V L F+A G
Sbjct: 295 EAMEVTMRRAMRFFPALKDVNII------RAFAGLRPFTPDGIPVIGEVEKLPGFFVAAG 348
Query: 457 HEGLGLSLALGTAELVADMVL 477
HEG G++LA T +L+A++++
Sbjct: 349 HEGDGIALAPITGKLMAELLV 369
>gi|325915140|ref|ZP_08177466.1| glycine/D-amino acid oxidase, deaminating [Xanthomonas vesicatoria
ATCC 35937]
gi|325538662|gb|EGD10332.1| glycine/D-amino acid oxidase, deaminating [Xanthomonas vesicatoria
ATCC 35937]
Length = 409
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 200/431 (46%), Gaps = 64/431 (14%)
Query: 70 LNPITASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIW 129
++P AS+R ++D+I+IGAGI+G A L VA+++ G+T A G++
Sbjct: 32 VSPSVASTR-RSYDLIVIGAGIVGAACAEAAAG-EGLRVAIIEPGPIGGGSTAAAMGHLV 89
Query: 130 MVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLK 189
+ P L+ S +LW+ A L+ + + G+L + R EL +
Sbjct: 90 AMDDDPAE--LALSAYSLRLWERFAQ---------LREAEFSRCGTLWVARDARELAAVP 138
Query: 190 ERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRH 249
++ +L A LRAE + + L EP+L+ G + +P + AV Y + RH
Sbjct: 139 AKIARLAAADLRAEAIDAQQLYTLEPQLVAGL-AGGMRVPNE-------AVVYPPRVARH 190
Query: 250 FAS---KGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHD 306
S K F VT L + V+ L S +V SG +
Sbjct: 191 LVSLACKAGAQLFAGRQVTQL-------QAHGVRLDDGQLLSGPVLVA-----SGVALPQ 238
Query: 307 LLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QIL 365
LL E + ++PRKGHL++ + L + H +E GY HG
Sbjct: 239 LLPE------LALRPRKGHLVITDRHPGL-IRHQLLELGYA----------DSAHGADDT 281
Query: 366 SISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNR 425
S++ G +++GSSRQF + + ++ R+ +RA + P LR+L
Sbjct: 282 SVAFNVQPRPTGQILIGSSRQFGEHDRALSMPVLQRMLQRAFAYLPVLREL------QAI 335
Query: 426 KVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDS 485
+V GLRP PDG+P +G VPG + V++A GHEGLG++ ALG+A ++ D +L +D
Sbjct: 336 RVWTGLRPATPDGRPYLGAVPGRADVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAIDP 395
Query: 486 APF----AVQG 492
AP+ AVQG
Sbjct: 396 APYAPARAVQG 406
>gi|302547807|ref|ZP_07300149.1| oxidoreductase, FAD-dependent [Streptomyces hygroscopicus ATCC
53653]
gi|302465425|gb|EFL28518.1| oxidoreductase, FAD-dependent [Streptomyces himastatinicus ATCC
53653]
Length = 401
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 186/413 (45%), Gaps = 41/413 (9%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAG+IG A + L V VV++ G T A +G I + + G E+ DL
Sbjct: 19 DVLVIGAGVIGAACA-YYCTSAGLRVTVVERGAIGGGTTSACEGNILVSDKETGPEL-DL 76
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
AL S++LW+ + L ++ + G +++ + L+ + AG+ A
Sbjct: 77 ALLSSRLWREIRGDLGAAAVE------YHAKGGVVVAGSDATARGLRRLTAEQRAAGVEA 130
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E + +L + EP L E + A P D+Q+ +LA A++ H
Sbjct: 131 EDVGPDELAELEPNLTR-EVAGGAHYPQDAQVQPVLAAAHL------LRRARARGAAVHT 183
Query: 263 P--VTCLLRSNSTGEVEAVQTSKNTLYSKKA--IVVAAGCWSGSLMHDLLRETEIVLDIP 318
VT LR + G V V+T TL + A +V AAG W+G L DL +P
Sbjct: 184 GMNVTGFLR-DQHGAVTGVRTDSATLPALHARWVVNAAGTWAGQLA-DLAGAP-----VP 236
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
V PRKG +LV E + + H A YV + + L S+ G
Sbjct: 237 VLPRKGFILVTEPLPRV-VRHKVYTAEYVAN--------VASDDAGLETSVVVEGTRAGT 287
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+++G+SR+ GF+ V ++ ++ +A +P L D+ L + +G RPY PD
Sbjct: 288 VLIGASRERVGFDRTVALPVLRKLADQAVGLFPFLSDVALL------RSYLGFRPYCPDH 341
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
PVIGP P + A GHEG G+ LA T LVA ++ + PF Q
Sbjct: 342 LPVIGPDPRAPGLVHACGHEGAGIGLAPATGHLVAQLLTGRAPDLPLTPFRPQ 394
>gi|365865104|ref|ZP_09404770.1| putative secreted oxidoreductase [Streptomyces sp. W007]
gi|364005462|gb|EHM26536.1| putative secreted oxidoreductase [Streptomyces sp. W007]
Length = 386
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 178/403 (44%), Gaps = 42/403 (10%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
V++IGAGI+G A + L V V+D+ +G T G+G I + + PG E+ +
Sbjct: 1 MKVVVIGAGIVGAACAFHAAA-AGLDVTVLDRGPVGAGTTSRGEGNILLSDKEPGPEL-E 58
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
LA S LW + L + ++ ++ G L++ TP+ L L + AG+R
Sbjct: 59 LARLSRDLWDEAGEELGPETVE------FETKGGLVVASTPDALGALHAFAARQAAAGVR 112
Query: 202 AEYLSSSDLLQ--AEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
E + L+ A P L G P D+Q V + + R+
Sbjct: 113 TEAVERVGELEPHAAPGLPGG-----VHYPQDAQ------VQPVLAAAGLLRAAVRHGAR 161
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
H + + G + V+T+ T+ A+V AAG W G + L EI+
Sbjct: 162 THTGEAVAAVTGTDGRITGVRTADGTVLPADAVVNAAGTWGGEVGRRLGAPVEIL----- 216
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
PR+G +LV E + + H A YV + + + L S G +
Sbjct: 217 -PRRGFVLVTEPLPPM-IRHKVYSADYVAN--------VASSDEGLETSCVVEGTRAGTI 266
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++G+SR+ GF+T + ++ R+ +A +P LR + L R R G RPY PD
Sbjct: 267 LIGASRERVGFDTSMNPAVVARLAAQACRLFPFLRGVHLI-----RAYR-GFRPYCPDHL 320
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLK 482
PVIGP P + V A GHEG G+ LA GT LV +L +P +
Sbjct: 321 PVIGPDPRVPGVVHACGHEGAGIGLAPGTGALVTAQLLGHPWR 363
>gi|374985904|ref|YP_004961399.1| sarcosine oxidase beta subunit [Streptomyces bingchenggensis BCW-1]
gi|297156556|gb|ADI06268.1| sarcosine oxidase beta subunit [Streptomyces bingchenggensis BCW-1]
Length = 401
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 181/390 (46%), Gaps = 45/390 (11%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L V VVD+ G + AG+G + + + G E+ DLAL S ++W+ D GL
Sbjct: 37 LRVTVVDRGPLAGGTSSAGEGNLLVSDKEAGPEL-DLALFSQRVWR--EDLAEHAGL--- 90
Query: 166 QVIGWK--QTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDS 223
W+ G L++ TP L + V + G+ A + +L EP L E
Sbjct: 91 ----WEFEAKGGLVVAATPGGADALAKLVLEQRAQGIEAVDVPKDELPDYEPHLSP-ELV 145
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGE-VEAVQTS 282
AF P D+Q+ ML VA++ + R ++ R VT LR TGE + V+TS
Sbjct: 146 SGAFYPQDAQVQPMLVVAHLLRMARQAGARVRT----DTEVTGFLR---TGERITGVRTS 198
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV-LDIPVKPRKGHLLVLENFNSLKLNHAS 341
+ L S A++ A G W+G + E+ + +PV PR+G +LV + + + H
Sbjct: 199 RGPL-SAPAVLNAGGTWAGVV-------AELAGVRVPVLPRRGCVLVTQPLPVM-VRHKV 249
Query: 342 MEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDR 401
A YVG + L S G +++GSSR+ GF+ EV ++
Sbjct: 250 YAAEYVGD--------VASSDAALQTSPVVEGTRAGTILIGSSRERVGFDREVPPPLLAA 301
Query: 402 IWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLG 461
+ + A +P L + + +G RPY PD PVIGP P ++ A GHEG G
Sbjct: 302 LARNAIALFPFLAS------VQAIRSYLGFRPYCPDHLPVIGPDPRAPGLWHACGHEGAG 355
Query: 462 LSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
+ L++GT +L+A + P +D PFA +
Sbjct: 356 VGLSVGTGKLLAQALTDRPTGLDLTPFAPE 385
>gi|375310145|ref|ZP_09775422.1| sarcosine oxidase beta subunit [Paenibacillus sp. Aloe-11]
gi|375077833|gb|EHS56064.1| sarcosine oxidase beta subunit [Paenibacillus sp. Aloe-11]
Length = 406
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 184/394 (46%), Gaps = 47/394 (11%)
Query: 104 SDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLD 163
SDL V + ++ G + G I + + PG + ++L S +L LA L D+
Sbjct: 27 SDLKVVLAERGEIAGGTSSRCDGNILAIDKEPGFDS-RMSLVSQELVAELARELEDE--- 82
Query: 164 PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDS 223
++ GS+L+ +E+ ++ V + + GL L L + P L
Sbjct: 83 ----FEYRAPGSILVCENEQEMQAAEQWVARQQQEGLPFRMLDQQALRKEWPHL------ 132
Query: 224 RAAFLP------YDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
A LP DS ++ +L + R ++ P+ +L+ + G V
Sbjct: 133 -AKDLPGGLECATDSTVNPVLMTYALANAARRMGAR----LLPRTPIRSVLK-DEGGNVR 186
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
V+T +++ A+V+AAG W+ S+ H L L +P+ PRKGH+LV S+
Sbjct: 187 GVETPNGVIHAD-AVVLAAGVWTRSIGHSL------GLSLPIMPRKGHILVSARMPSIG- 238
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILS---ISMTATTDVIGNLVLGSSRQFAGFNTEV 394
ME GY+ ++ GQ + ++ +++ N+++GSSRQF G +T V
Sbjct: 239 KRKVMEFGYL----MSKFGGQRSVDEVYEKYGVALVFEPTASQNILIGSSRQFVGMDTGV 294
Query: 395 EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLA 454
+Q +I I +RA F+P L ++ L + GLRP+ PD P++ V + +F+A
Sbjct: 295 DQQVIRLIARRAIRFFPALANVPLL------RAYTGLRPWTPDHLPIVSAVDEVPGLFIA 348
Query: 455 TGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+GHEG G+SLA T +LV +MV P + P
Sbjct: 349 SGHEGDGISLAAVTGKLVTEMVRGEPTCIPVEPL 382
>gi|229083995|ref|ZP_04216291.1| Sarcosine oxidase, beta subunit [Bacillus cereus Rock3-44]
gi|228699285|gb|EEL51974.1| Sarcosine oxidase, beta subunit [Bacillus cereus Rock3-44]
Length = 392
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 178/366 (48%), Gaps = 44/366 (12%)
Query: 118 SGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLL 177
SG + G I + + PG + ++L S KL LA LR ++ GS+L
Sbjct: 40 SGTSSRCDGNILAIDKDPGFD-SQMSLESQKLVDQLAKELR-------HSFEYRAPGSIL 91
Query: 178 IGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGED--SRAAFLPYD 231
+ + EE++ ++ VK+ +AGL L D+ Q P +L+ G + + + PY
Sbjct: 92 VCESEEEMIAAEKWVKRQKDAGLPFRMLDRQDIRQESPYFADDLLGGLECATDSTVNPY- 150
Query: 232 SQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKA 291
+L+ + +++ R + E ++ + TG V V+T+K T + K
Sbjct: 151 -----LLSFSLLDEAKRQGTDVHLHTEVRS------IQKDGTG-VFVVETNKGTFTANK- 197
Query: 292 IVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY-VGHH 350
+V AAG WS L+ ++L + IP++PRKGH++V + ME GY +
Sbjct: 198 VVNAAGVWS-PLIGEMLD-----VKIPIQPRKGHIIVASRQEPVGTRKV-MEFGYLISKF 250
Query: 351 DLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFY 410
H + +++ T N ++GSSRQF GF T+V+ ++I I KRA FY
Sbjct: 251 GGKRHVDEETEKYGVALVFEPTES--QNFLIGSSRQFVGFQTKVDTSVIKCIAKRAIRFY 308
Query: 411 PKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAE 470
PK+ D+ L + GLRP+ D P+I V + ++A GHEG G+SLA T +
Sbjct: 309 PKMADMLLI------RTYAGLRPWTADHLPIISHVEEVPGFYIAAGHEGDGISLAAITGK 362
Query: 471 LVADMV 476
L+A+M+
Sbjct: 363 LIAEMI 368
>gi|285018732|ref|YP_003376443.1| fad dependent oxidoreductase oxidoreductase [Xanthomonas
albilineans GPE PC73]
gi|283473950|emb|CBA16451.1| putative fad dependent oxidoreductase oxidoreductase protein
[Xanthomonas albilineans GPE PC73]
Length = 366
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 187/411 (45%), Gaps = 57/411 (13%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
FD+I++GAGI+G A + L VA+V+ G+T A G++ + P
Sbjct: 4 FDLIVVGAGIVGAACADAAAA-AGLRVAIVESGSIGGGSTAAAMGHLVAMDEDPAE--LA 60
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
L+ S +LW+ A PL + + G+L + R EL + ++++L AG+
Sbjct: 61 LSAYSLRLWEEFA---------PLPEAEFSRCGTLWVAREARELDAIPAKIQRLAAAGVH 111
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK--GRYAEF 259
AE + + L Q EP L+ G A AV Y + R+ + G A
Sbjct: 112 AEAVDAQQLYQLEPALVPGLAG--------GMRVAAEAVVYPPRMARYLVDRACGAGARL 163
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
Y R+ + +V L+ ++VA GC + DLL E +P+
Sbjct: 164 YAG-----RRALALVDVGLRLDDGTALHGP--VLVATGC----ALPDLLPE------LPM 206
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGN 378
+ RKG L++ + + G+V H L L HG S++ G
Sbjct: 207 RARKGQLVITDRYP-----------GFVAHQLLELGYADSAHGSDGSSVAFNVQPRPTGQ 255
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++GSSR+F + V ++ R+ +RA F P LR L +V GLRP PDG
Sbjct: 256 LLIGSSREFDARDRTVSMPMLQRMLERAFGFLPGLRQL------QAIRVWTGLRPATPDG 309
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
+P +G VP V++A GHEGLG++ ALG+A L+ D++L +D PFA
Sbjct: 310 RPYLGAVPQRRDVWVAAGHEGLGVTTALGSARLLLDLLLQRRPALDPTPFA 360
>gi|445499166|ref|ZP_21466021.1| FAD dependent oxidoreductase [Janthinobacterium sp. HH01]
gi|444789161|gb|ELX10709.1| FAD dependent oxidoreductase [Janthinobacterium sp. HH01]
Length = 372
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 185/406 (45%), Gaps = 49/406 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGI+G A L + V V+++ + SGAT AG G++ ++ P L
Sbjct: 9 DVIVIGAGIVGAACA-DALSQRGMRVKVIEQEMAGSGATAAGMGHLVVMDDNPAE--LAL 65
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S LW L L Q + + G++ + EE+ + + + L G+
Sbjct: 66 SAYSVSLWNSLVGDLP-------QRHEYSRCGTIWVAADEEEMDAARAKAETLSAYGIAC 118
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E L+ + L + EP+L G L + + Y K R +
Sbjct: 119 ELLAPAALYEREPQLRPGLAG--------GLLVSGDGLVYPPKSARILLDRA-----IRR 165
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
T L S E V + Y + +V+AAG R T ++ D+PV+P+
Sbjct: 166 GATTLRGSVVAIEDNGVLLADGARYQAQHVVLAAGS----------RSTALLPDLPVQPK 215
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGH+ + + + ++H +E GY+ + H + S++ G +++G
Sbjct: 216 KGHIAITDRYPGF-VHHQLVELGYIK----SAHAASGD-----SVAFNLQPRPTGQVLIG 265
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE ++ R+ + AA F P L L + + GLR PDG P+I
Sbjct: 266 SSRQFDTIDLAVEPAMLQRMLRHAAAFTPALAQLNVL------RCWTGLRAATPDGLPLI 319
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
GP ++LATGHEGLG++ +L TA+L+A + + ++ ++P+
Sbjct: 320 GPHAARRGLWLATGHEGLGITTSLATAQLLAAQMNGDSTRIPASPY 365
>gi|411003127|ref|ZP_11379456.1| oxidoreductase [Streptomyces globisporus C-1027]
Length = 386
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 181/401 (45%), Gaps = 38/401 (9%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
DV++IGAGI+G A + L V V+D+ +G T G+G I + + PG E+ +
Sbjct: 1 MDVVVIGAGIVGAACAFHAAS-AGLGVTVLDRGPVGAGTTSRGEGNILLSDKEPGPEL-E 58
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
LA S LW L P +V ++ G L++ TPE L L + AG+
Sbjct: 59 LARLSRDLWDEAGKEL-----GPGEVE-FENKGGLVVASTPEGLAALHAFAARQATAGIH 112
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYH 261
E + L + EP + G + P D+Q+ +LA A + + ++ R E
Sbjct: 113 TERVDH--LNEFEPHIAPGLPGGVHY-PQDAQVQPVLAAAGLLRAAVRRGARVRTGE--- 166
Query: 262 DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
+ + G V V+T+ + + A+V AAG W G + L EI+ P
Sbjct: 167 ---AVAAVTGTGGRVTGVRTADGAVLAADAVVNAAGTWGGEVGRRLGAPVEIL------P 217
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVL 381
R+G +LV E + + H A YV H + + L S G +++
Sbjct: 218 RRGFVLVTEPLPPM-IRHKVYSADYVAH--------VASSDEGLETSCVVEGTRAGTILI 268
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
G+SR+ GF+T + ++ + +A +P LRD+ L R R G RPY PD PV
Sbjct: 269 GASRERVGFDTAMNPAVVALLAAQACRLFPFLRDVHLL-----RAYR-GFRPYCPDHLPV 322
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLK 482
+GP P V A GHEG G+ LA GT L+ +L P +
Sbjct: 323 VGPDPRAPGVLHACGHEGAGIGLAPGTGALITAQLLGRPWR 363
>gi|407644057|ref|YP_006807816.1| FAD-dependent oxidoreductase [Nocardia brasiliensis ATCC 700358]
gi|407306941|gb|AFU00842.1| FAD-dependent oxidoreductase [Nocardia brasiliensis ATCC 700358]
Length = 407
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 187/410 (45%), Gaps = 33/410 (8%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV+IIG G+IG +A +L + + SV V ++ SG T G+G + + + PG E+ L
Sbjct: 15 DVLIIGGGMIGCALADRLAL-AGASVRVCERGGIASGTTAHGEGNVLVSDKGPGPEL-RL 72
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
A S +LW + + + + W+ G +++ T L E + AG+R
Sbjct: 73 AQLSRRLWPEVLARIGARHPADAAAVEWEAKGGIVVATTEPGAAALAEFAARQRSAGVRC 132
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLD-AMLAVAYIEKGNRHFASKGRYAEFYH 261
E L + L AEP L + A P D+Q+ A A A +E + G E
Sbjct: 133 EQLDADQLTAAEPALTR-DVCAAVHYPEDAQVQPAGAATALLESA----VAAGTLVETTC 187
Query: 262 DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
+ V L R + + V T++ ++ ++ AAG WS ++ + I V+P
Sbjct: 188 EVVAPLRRGD---RLIGVHTTRGPRHAD-IVINAAGPWSAAV------GALLGAPIAVRP 237
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVL 381
R+G +L+ + H +A YVG + L S + G L+L
Sbjct: 238 RRGDVLITAPMPP-TVFHKVYDADYVG--------AVGSSDTALQSSAVVESTRGGPLLL 288
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
GSSR+ GF+ + + I +RA YP L D+ + + G RPY+ D PV
Sbjct: 289 GSSRRQCGFDNRLRPDSLAAIARRAIRLYPVLADVAIM------RAYGGFRPYVDDHLPV 342
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
IGP P L ++ ATGHEG G+ L++GTAEL+ + P D A F V
Sbjct: 343 IGPDPRLPGLWHATGHEGAGIGLSVGTAELICAALTGGPDHPDLAAFTVD 392
>gi|424792235|ref|ZP_18218485.1| FAD-dependent oxidoreductase [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422797180|gb|EKU25558.1| FAD-dependent oxidoreductase [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 366
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 184/411 (44%), Gaps = 57/411 (13%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
FD+I++GAGI+G A + L VA+V+ G+T A G++ + P
Sbjct: 4 FDLIVVGAGIVGAACADAAAA-AGLRVAIVESGTIGGGSTAAAMGHLVAMDEDPAE--LA 60
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
L+ S +LW+ A L + + G+L + R EL + ++++L AG+
Sbjct: 61 LSAYSLRLWEEFAH---------LPAAEFSRCGTLWVARQAHELEAIPAKIQRLAAAGVH 111
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA--EF 259
AE + + L + EP L+ G A AV Y + RH + A +
Sbjct: 112 AEAIDAEALYRLEPALVPGLAG--------GMRVAAEAVVYPPRMARHLVERALAAGAQL 163
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
Y L V + S ++VA GC E++ ++P+
Sbjct: 164 YAGYRALTLAGGG------VLLDDGSRLSGP-VLVATGC----------ALPELLPELPM 206
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGN 378
+ RKG L++ + + G+VGH L L HG S++ G
Sbjct: 207 RARKGQLVITDRYP-----------GFVGHQLLELGYADSAHGSDGSSVAFNVQPRPTGQ 255
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+++GSSR+F + V ++ R+ +RA F P LR L +V GLRP PDG
Sbjct: 256 ILIGSSREFDASDRSVSMPMLQRMLERAFGFLPALRQL------QAIRVWTGLRPATPDG 309
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
+P +G VP V++A GHEGLG++ ALG+A L+ D++L +D APFA
Sbjct: 310 RPYLGAVPERDGVWVAAGHEGLGVTTALGSARLLLDLLLQRTPTLDPAPFA 360
>gi|433676699|ref|ZP_20508781.1| D-amino acid oxidase [Xanthomonas translucens pv. translucens DSM
18974]
gi|430818183|emb|CCP39097.1| D-amino acid oxidase [Xanthomonas translucens pv. translucens DSM
18974]
Length = 366
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 184/411 (44%), Gaps = 57/411 (13%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
FD+I++GAGI+G A + L VA+V+ G+T A G++ + P
Sbjct: 4 FDLIVVGAGIVGAACADAAAA-AGLRVAIVESGTIGGGSTAAAMGHLVAMDEDPAE--LA 60
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
L+ S +LW+ A L + + G+L + R EL + ++++L AG+
Sbjct: 61 LSAYSLRLWEEFAH---------LPAAEFSRCGTLWVARQAHELEAIPAKIQRLAAAGVH 111
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA--EF 259
AE + + L + EP L+ G A AV Y + RH + A +
Sbjct: 112 AEAIDAQALYRLEPALVPGLAG--------GMRVAAEAVVYPPRMARHLVERALAAGAQL 163
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
Y L V + S ++VA GC E++ ++P+
Sbjct: 164 YAGYRALTLAGGG------VLLDDGSRLSGP-VLVATGC----------ALPELLPELPM 206
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGN 378
+ RKG L++ + + G+VGH L L HG S++ G
Sbjct: 207 RARKGQLVITDRYP-----------GFVGHQLLELGYADSAHGSDGSSVAFNVQPRPTGQ 255
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+++GSSR+F + V ++ R+ +RA F P LR L +V GLRP PDG
Sbjct: 256 ILIGSSREFDASDRSVSMPMLQRMLERAFGFLPALRQL------QAIRVWTGLRPATPDG 309
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
+P +G VP V++A GHEGLG++ ALG+A L+ D++L +D APFA
Sbjct: 310 RPYLGAVPERDGVWVAAGHEGLGVTTALGSARLLLDLLLQRTPALDPAPFA 360
>gi|293604124|ref|ZP_06686532.1| oxidoreductase [Achromobacter piechaudii ATCC 43553]
gi|292817349|gb|EFF76422.1| oxidoreductase [Achromobacter piechaudii ATCC 43553]
Length = 379
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 186/409 (45%), Gaps = 53/409 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV+++GAGIIG A QL + LSV V+D + GAT AG G++ ++ P +L
Sbjct: 12 DVVVVGAGIIGAACAHQL-AKAGLSVHVLDARL--GGATQAGMGHLVVMDSNPA----EL 64
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL + + W+ R DP + + G+L + ++ + + +L + G+
Sbjct: 65 ALSAASMEAWRQWGP--RMNATDP--GCAYTECGTLWVATDRNDMAEAERKHARLHDCGI 120
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
A L++S L AEP L G + +P D + Y R + +
Sbjct: 121 SATLLTASQLANAEPGLRAGL-AGGLHVPGDG-------LVYAPSAARWLLTHAPPGMSF 172
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
C + + E V + + + +A+V+A G + T + D+P+
Sbjct: 173 EAAQVCTI------DEEGVVLADGSRRNAQAVVLATG----------IMATRLCDDLPLH 216
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHL + + + + + H +E GY+ + +++ G L+
Sbjct: 217 PKKGHLAITDRYPT-GIRHQLVELGYMA---------STHQRDGAAVAFNVQPRPTGQLL 266
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQ + V+ ++ R+ KRA EF P L + L + G+R PDG P
Sbjct: 267 IGSSRQTGQSDASVDSLLLSRMLKRAIEFLPGLSGMNLI------RTWTGIRAATPDGLP 320
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
+IGP P K++LA GHEGLG++ A TA L+ ++ + +APFA
Sbjct: 321 LIGPHPTRPKLWLALGHEGLGVTTAPTTAALLTALMSNAATPLAAAPFA 369
>gi|301513911|ref|ZP_07239148.1| putative oxidoreductase [Acinetobacter baumannii AB058]
Length = 330
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 164/372 (44%), Gaps = 48/372 (12%)
Query: 120 ATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIG 179
AT AG G++ ++ L+ S +LW L L + ++QT +L +
Sbjct: 1 ATAAGMGHLVIMDDLEAE--LKLSHWSVQLWHELGHELSED-------CAYRQTPTLWLA 51
Query: 180 RTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLA 239
+PEE+ + +E+ ++L G+R + ++ ++ Q EP L G D L A A
Sbjct: 52 SSPEEMQIAEEKYQRLTAQGVRCQLRNADEVRQLEPHLKQGLYGGLEVFD-DGILYAPCA 110
Query: 240 VAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCW 299
++ K H + + A+ H E VQ S T IV+A G
Sbjct: 111 AEWLLKKIPH-KVQVQQAKVIHI------------EENRVQLSDGTWLEAAHIVLANG-- 155
Query: 300 SGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQV 359
+ T+ ++P++P+KGHL + + + L + H + Y Q
Sbjct: 156 --------IHATDFFPELPIEPKKGHLAITDRYPELNVKHTLVALAYAAS-------TQA 200
Query: 360 NHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLA 419
G +S++ G L +GSSRQF + VE + R+ K AA+++P L DL +
Sbjct: 201 TSG--ISVACNIQPRPTGQLFIGSSRQFNTVDPTVEPEVFTRVLKEAADYFPALADLNVI 258
Query: 420 DFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN 479
+ G R PDG P+IG P V+LA GHEGLG++ A GTA+L+A +
Sbjct: 259 ------RAWTGFRAATPDGIPIIGRHPTFQSVYLAVGHEGLGVTTATGTAKLIASHICGI 312
Query: 480 PLKVDSAPFAVQ 491
+D PF Q
Sbjct: 313 TFDIDPEPFLPQ 324
>gi|226357445|ref|YP_002787184.1| FAD dependent oxidoreductase [Deinococcus deserti VCD115]
gi|226319435|gb|ACO47430.1| putative FAD dependent oxidoreductase, precursor [Deinococcus
deserti VCD115]
Length = 370
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 185/395 (46%), Gaps = 59/395 (14%)
Query: 101 LVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSN--KLWKMLADSLR 158
L + V V++ G+T AG G++ ++ +P LAL S +LW+ LA L
Sbjct: 22 LARQNWQVTVIEAGTVGGGSTAAGMGHLVVMDDSPTQ----LALTSLSLQLWEALAPQLP 77
Query: 159 DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELM 218
Q +++ G+L + EEL+ ++ + +Q AG A L +++L + EP L
Sbjct: 78 PQA-------DYRRCGTLWVASDEEELLGVRPKQQQYLSAGREATMLDAAELARHEPSLR 130
Query: 219 VGEDSRAAFLPYDSQLDAMLAVAY-IEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
G + +P D+ + A + + IE+ AE V L +
Sbjct: 131 PGL-AGGLRVPDDAVVYAPVVARFLIERAG---------AEVVQGEVVAL-------DGR 173
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
V+ + S +VVA G + +L+ +L P++PRKGHLL+ E SLK+
Sbjct: 174 GVRLTDGRTLSADLVVVAGGADASALLPEL----------PLRPRKGHLLITER-TSLKV 222
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHG-QILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
NH +E GY+ + HG + S++ G L++GSSRQF + +++
Sbjct: 223 NHQLVELGYL----------KSAHGTETDSVAFNVQPRPTGQLLIGSSRQFGQMDKQIDW 272
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
++ R+ +AAEF P L ++ ++ G R PD P++GP P V+LA G
Sbjct: 273 PLLRRMLGQAAEFLPDLPQ------VNALRIWTGQRSASPDHLPIVGPHPDRPGVYLAVG 326
Query: 457 HEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
HEGLG++ AL TAEL+ + P + A ++
Sbjct: 327 HEGLGITTALATAELLRAHLAGQPSPLPGAALGLE 361
>gi|389737475|ref|ZP_10190907.1| D-amino acid oxidase, partial [Rhodanobacter sp. 115]
gi|388435055|gb|EIL91975.1| D-amino acid oxidase, partial [Rhodanobacter sp. 115]
Length = 345
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 176/392 (44%), Gaps = 60/392 (15%)
Query: 103 GSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALR--SNKLWKMLADSLRDQ 160
GS + A+V+ G+T A G++ + P +LAL S +LW+ AD
Sbjct: 3 GSPAAAAIVEPGPIGGGSTAAAMGHLVAMDDDPA----ELALSRYSLQLWEAFAD----- 53
Query: 161 GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVG 220
L + + + G+L + R+P+E + R+ +L AG+ A + + +L + EP L G
Sbjct: 54 ----LAEVEFSRCGTLWVARSPQETGAIDTRIARLAAAGIEACAVDADELYRLEPLLAPG 109
Query: 221 EDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKG--RYAEFYHDPVTCLLRSNSTGEVEA 278
+ +P D AV Y + H + A +H L +
Sbjct: 110 M-AGGLRVPGD-------AVVYPPRVALHLVKRACAHSATLHHGRRVLTLDDGAV----- 156
Query: 279 VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLN 338
T + ++VA GC L+ L P++ RKGHL++ + + L L+
Sbjct: 157 --TLDDGSRLLGPVLVATGCALPQLLPQL----------PMRSRKGHLVITDRYPGL-LH 203
Query: 339 HASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
H +E GY HG S++ G +++GSSR+F ++ V
Sbjct: 204 HQVLELGYA----------DSAHGDADSSVAFNVQPRPTGQILIGSSREFGDGDSAVSPP 253
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
++ R+ +RA F P LRDL + G RP DG+P +G VPG V+ A GH
Sbjct: 254 MVQRMLQRAFTFMPGLRDL------QALRTWTGFRPTPIDGRPYLGAVPGYRDVWAAAGH 307
Query: 458 EGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
EGLG++ ALG+A L+ D++ + +D APFA
Sbjct: 308 EGLGVTTALGSARLLIDLLRGDTPAIDPAPFA 339
>gi|134099787|ref|YP_001105448.1| oxidoreductase [Saccharopolyspora erythraea NRRL 2338]
gi|133912410|emb|CAM02523.1| secreted oxidoreductase [Saccharopolyspora erythraea NRRL 2338]
Length = 394
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 180/393 (45%), Gaps = 28/393 (7%)
Query: 99 QLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLR 158
+ L L V V+D+ P +G T AG+G + + + PG E+ +LA S ++W L D LR
Sbjct: 20 EALSARGLRVTVLDRGAPAAGTTAAGEGNVLVSDKAPGPEL-ELAKASRRIWPELLDGLR 78
Query: 159 DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELM 218
+ + L + W+ G +++ T E L E + A +RAE ++++ + EP L
Sbjct: 79 AELGEALTGVEWEPKGGIVVATTDESAGPLVEFARAQRAAQVRAEVITAAQAAELEPHLT 138
Query: 219 VGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEA 278
+ A P D+QL +LA + A + R E + + G V
Sbjct: 139 P-RVTAAVHYPDDAQLQPVLAATTLLA-----AVRARGGEVRPGVAALGVGRRADGSVAE 192
Query: 279 VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLN 338
V+T++ + A+V A G W+G ++ PR+G +LV +
Sbjct: 193 VRTNRGAVPCG-AVVNACGPWAGEFAAVAGAPVAVL------PRRGLVLVTGPLPEGTVR 245
Query: 339 HASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTI 398
H +A YVG + G + L S + G +++GSSRQ AGF+ + +
Sbjct: 246 HKVYDADYVG----AVASGDAD----LQTSTVVESTRAGTVLIGSSRQRAGFDETIRPRV 297
Query: 399 IDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHE 458
+ + ++A +P L D+ + + G RPY PD PVIG P ++ ++ ATGHE
Sbjct: 298 LSELARKAVGLFPVLADVPVM------RAYGGFRPYAPDHLPVIGADPRIAGLWHATGHE 351
Query: 459 GLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
G G+ LA T L+A++ VD PF V
Sbjct: 352 GAGIGLAAATGRLLAELFTGGEPVVDPEPFRVD 384
>gi|386843825|ref|YP_006248883.1| oxidoreductase [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|374104126|gb|AEY93010.1| oxidoreductase [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|451797118|gb|AGF67167.1| oxidoreductase [Streptomyces hygroscopicus subsp. jinggangensis
TL01]
Length = 386
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 192/412 (46%), Gaps = 40/412 (9%)
Query: 77 SRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG 136
++ T DV+++GAG+ G A + L V +VD+ G TGAG+G + + + PG
Sbjct: 2 AKLLTCDVVVVGAGMTGAACALYAAR-AGLDVRLVDRGPVAGGTTGAGEGNLLVSDKEPG 60
Query: 137 SEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
E+ +LAL S +LW LA L I ++ G L++ TP L L++
Sbjct: 61 PEL-ELALLSARLWAELAGELG-------AAIEYEPKGGLVVASTPGALAALRDFAADQR 112
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRY 256
AG+ A + + L EP + G + A P D+Q+ LA A++ + + GR
Sbjct: 113 TAGVTAVPVDAGQLADVEPHVAPGM-AGAVHYPQDAQVMPALAAAHLVRASGAALHTGRT 171
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
VT +LR+ + G V V+T + +++ A+V AAG W G L + +
Sbjct: 172 -------VTGVLRT-ARGAVRGVRTDRGDIHAP-AVVNAAGTWGGDL------ASLAGVR 216
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
+PV PR+G +LV E + + H A YV + L S
Sbjct: 217 LPVLPRRGFVLVTEPLPRM-VRHKVYAADYVAD--------VASDSAALRSSPVVEGTAA 267
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
G +++G++R+ GF+ + T + + A +P L + + + G RPY+P
Sbjct: 268 GPVLIGATRERVGFDRSLSLTAMRALAAGAIGLFPFL------ERVRALRTYAGFRPYLP 321
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
D P IGP P + +F A GHEG G+ LA GT +L+A + ++D PF
Sbjct: 322 DHLPAIGPDPRVPGLFHACGHEGAGIGLAPGTGQLIAQALTGKAPELDLTPF 373
>gi|115358301|ref|YP_775439.1| FAD dependent oxidoreductase [Burkholderia ambifaria AMMD]
gi|115283589|gb|ABI89105.1| FAD dependent oxidoreductase [Burkholderia ambifaria AMMD]
Length = 375
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 188/406 (46%), Gaps = 53/406 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V VVD GATGAG G+ +V + L
Sbjct: 7 DVVVIGAGIVGAACAHEL-AQRGLRVLVVDDA--SGGATGAGMGH--LVAMDDNAAELAL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW+ L+ + + ++ G+L + E+ + + + L G+
Sbjct: 62 SHYSIELWRALSGDMPEG-------CAYRNCGTLWLAADSNEMDLARTKQATLAAHGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E + ++ L + EP L G A +P D+ L A +A +++ + + A
Sbjct: 115 ELIDAATLARLEPMLRAGLGG-ALKIPGDAILYAPVAASWLLQRAPGITLRRDRAVAVDG 173
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
P L S +TL +++ +VVA G + +L+ +L P++P+
Sbjct: 174 PSVTL-------------ASGDTLRAER-VVVANGVAARTLLPEL----------PLRPK 209
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHLL+ + + +++H +E GY + S++ G L++G
Sbjct: 210 KGHLLITDRYPG-QVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLLIG 259
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + +E ++ R+ +RAA + P L DL + + G R PDG P++
Sbjct: 260 SSRQFDTEDARIEPPVLARMLRRAAGYLPDLADL------NGIRAWTGFRSASPDGLPLL 313
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A G+A LVA ++ +D P+
Sbjct: 314 GEHPARPGVWLAVGHEGLGVTTAPGSARLVAALMTGERPPIDIEPY 359
>gi|170702822|ref|ZP_02893673.1| FAD dependent oxidoreductase [Burkholderia ambifaria IOP40-10]
gi|170132274|gb|EDT00751.1| FAD dependent oxidoreductase [Burkholderia ambifaria IOP40-10]
Length = 375
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 189/408 (46%), Gaps = 57/408 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V VVD GATGAG G+ +V + L
Sbjct: 7 DVVVIGAGIVGAACAHEL-ARRGLRVLVVDDA--SGGATGAGMGH--LVAMDDNAAELAL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW+ L+ + + ++ G+L + E+ + + + L G+
Sbjct: 62 SHYSIELWRALSGDMPEG-------CAYRNCGTLWLAADSNEMDLARTKQATLAAHGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E + ++ L + EP L G A +P D+ L A +A +++
Sbjct: 115 ELIDAATLARLEPMLRAGLGG-ALKIPGDAILYAPVAASWL---------------LQRA 158
Query: 263 PVTCLLRSNSTGEVEAVQT--SKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
P L R + A T S +TL +++ +VVA G + +L+ +L P++
Sbjct: 159 PGITLRRDRAVAVDGASVTLASGDTLRAER-VVVANGVAARTLLPEL----------PLR 207
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + +++H +E GY + S++ G L+
Sbjct: 208 PKKGHLLITDRYPG-QVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLL 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF + +E ++ R+ +RAA + P L DL + + G R PDG P
Sbjct: 258 IGSSRQFDTEDARIEPPVLARMLRRAAGYLPDLADL------NGIRAWTGFRSASPDGLP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
++G P V+LA GHEGLG++ A G+A LVA ++ +D P+
Sbjct: 312 LLGEHPARPGVWLAVGHEGLGVTTAPGSARLVAALMAGERPPIDIEPY 359
>gi|325970941|ref|YP_004247132.1| FAD dependent oxidoreductase [Sphaerochaeta globus str. Buddy]
gi|324026179|gb|ADY12938.1| FAD dependent oxidoreductase [Sphaerochaeta globus str. Buddy]
Length = 391
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 191/406 (47%), Gaps = 34/406 (8%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE 138
+ DV++IG GIIGL+ L V V+D GA+GA I + PG
Sbjct: 2 TYAADVLVIGGGIIGLSCGF-YLSKRGKRVFVLDSGGFADGASGACDDMILFQSKKPGIN 60
Query: 139 IWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA 198
+ L S +L+K L L D +G+ G +++ +EL +++E V Q
Sbjct: 61 LA-LTFESLELYKSLLTELDDD-------LGFANMGGMVLIENQQELEIMEEFVAQQRSY 112
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE 258
GL E + +L+ +P + + + DSQ+D + E+ + K
Sbjct: 113 GLDVEVIDKRAMLKKQP-FLSDHIIASTYSKMDSQVDPFSVMRGFERKGGSYGMK----V 167
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
F + V + R TG+ + V T ++Y +V AAG W+G + +++ T IP
Sbjct: 168 FRRNGVVGIDRIG-TGDYQVV-TEDGSIYQAPIVVNAAGTWAGQI-GEMVGAT-----IP 219
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVG---HHDLTLHPGQVNHGQILSISMTATTDV 375
+KP++G ++V E + + A Y+ D+ + + LS+++T ++
Sbjct: 220 IKPKRGQIIVTERIPQIG-DTNLWSAKYLVTKLRSDVVVDLNEDERSMGLSMAITRSSG- 277
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
++GS+R+F GF+ I I K+ + PKLRD+ +FI + GLRP
Sbjct: 278 -DTYLIGSTREFVGFDKNTTIAGIRAIIKQTLTYLPKLRDV---NFI---RAMAGLRPST 330
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPL 481
PDG+ ++G G+ F A GHEG G++LA T +L+A MV +P+
Sbjct: 331 PDGRMLLGEHAGIEGFFTAAGHEGDGIALAPITGKLLASMVCRDPV 376
>gi|440730038|ref|ZP_20910138.1| fad dependent oxidoreductase oxidoreductase [Xanthomonas
translucens DAR61454]
gi|440379728|gb|ELQ16314.1| fad dependent oxidoreductase oxidoreductase [Xanthomonas
translucens DAR61454]
Length = 366
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 183/411 (44%), Gaps = 57/411 (13%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
FD+I++GAGI+G A + L VA+V+ G+T A G++ + P
Sbjct: 4 FDLIVVGAGIVGAACADAAAA-AGLRVAIVESGTIGGGSTAAAMGHLVAMDEDPAE--LA 60
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
L+ S +LW+ A L + + G+L + R EL + ++++L AG+
Sbjct: 61 LSAYSLRLWEEFAH---------LPAAEFSRCGTLWVARQAHELEAIPAKIQRLAAAGVH 111
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA--EF 259
AE + + L + EP L+ G A AV Y + RH + A +
Sbjct: 112 AEAIGAEALYRLEPALVPGLAG--------GMRVAAEAVVYPPRMARHLVERALAAGAQL 163
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
Y L V + S ++VA GC E++ ++P+
Sbjct: 164 YAGYRALTLAGGG------VLLDDGSRLSGP-VLVATGC----------ALPELLPELPM 206
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGN 378
+ RKG L++ + + G+VGH L L HG S++ G
Sbjct: 207 RARKGQLVITDRYP-----------GFVGHQLLELGYADSAHGSDGSSVAFNVQPRPTGQ 255
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+++GSSR+F + V ++ R+ +RA F P LR L +V GLRP PDG
Sbjct: 256 ILIGSSREFDASDRSVSMPMLQRMLERAFGFLPALRQL------QAIRVWTGLRPATPDG 309
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
+P +G VP V++A GHEGLG++ ALG+A L+ D++L +D PFA
Sbjct: 310 RPYLGAVPERDGVWVAAGHEGLGVTTALGSARLLLDLLLQRTPALDPVPFA 360
>gi|390991276|ref|ZP_10261545.1| FAD dependent oxidoreductase family protein [Xanthomonas axonopodis
pv. punicae str. LMG 859]
gi|372554003|emb|CCF68520.1| FAD dependent oxidoreductase family protein [Xanthomonas axonopodis
pv. punicae str. LMG 859]
Length = 383
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 184/412 (44%), Gaps = 53/412 (12%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR 133
+A+ ++D+I+IGAGI+G A L VA+V+ G+T A G++ +
Sbjct: 9 SAAGTRRSYDLIVIGAGIVGAACAEAAAG-EGLRVAIVEPGPIGGGSTAAAMGHLVAMDD 67
Query: 134 TPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
P L+ S +LW+ A L + + G+L + R EL + ++
Sbjct: 68 DPAE--LALSAYSLRLWERFAT---------LSEAEFSRCGTLWVARDARELAAVPAKIA 116
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+L AGL AE + ++ L EP+LM G + +P + AV Y + RH
Sbjct: 117 RLATAGLHAEAIDAAQLYALEPQLMPGL-AGGMRVPDE-------AVVYPPRVARHLVGA 168
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
T R + V +Q L + + SG + LL E
Sbjct: 169 A---------CTSGARLFAGRRVVQLQEHAVRLDDGQTLAGPVLVASGVALPQLLPE--- 216
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QILSISMTAT 372
+ ++PRKGHL++ + L + H +E GY HG S++
Sbjct: 217 ---LALRPRKGHLVITDRHPGL-IRHQLLELGYA----------DSAHGADDTSVAFNVQ 262
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G +++GSSRQF + + ++ ++ +RA + P LR+L +V GLR
Sbjct: 263 PRPTGQILIGSSRQFGEHDRALSMPVLQQMLQRAFAYLPVLREL------QAIRVWTGLR 316
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVD 484
P PDG+P +G VPG V++A GHEGLG++ ALG+A ++ D +L +D
Sbjct: 317 PATPDGRPYLGKVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAID 368
>gi|402569216|ref|YP_006618560.1| FAD dependent oxidoreductase [Burkholderia cepacia GG4]
gi|402250413|gb|AFQ50866.1| FAD dependent oxidoreductase [Burkholderia cepacia GG4]
Length = 375
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 187/406 (46%), Gaps = 53/406 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V VVD GATGAG G+ +V + L
Sbjct: 7 DVVVIGAGIVGAACAHEL-AQRGLRVLVVDDA--SGGATGAGMGH--LVAMDDNAAELAL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW+ L+ + + ++ G+L + E+ + + + L G+
Sbjct: 62 SHYSIELWRALSGEMPEG-------CAYRNCGTLWLAADAHEMDLARTKQATLAAHGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E + ++ L Q EP L G A +P DS L A +A +++ + + A
Sbjct: 115 ELIDATTLAQLEPMLRAGLGG-ALKIPGDSILYAPVAASWLLQRAPGITLRRDRAVAVDG 173
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
P L S +TL +++ +VVA G + +L+ +L P++P+
Sbjct: 174 PSVTL-------------ASGDTLRAER-VVVANGIAARTLLPEL----------PLRPK 209
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHLL+ + + +++H +E GY + S++ G L++G
Sbjct: 210 KGHLLITDRYPG-QVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLLIG 259
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + +E ++ R+ +RA + P L +L + + G R PDG P++
Sbjct: 260 SSRQFDTEDARIEPPVLARMLRRAVAYLPDLAEL------NGIRSWTGFRSASPDGLPLL 313
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A G+A LVA ++ +D P+
Sbjct: 314 GEHPARPGVWLAVGHEGLGVTTAPGSARLVAALMTGERPPIDIEPY 359
>gi|170735762|ref|YP_001777022.1| FAD dependent oxidoreductase [Burkholderia cenocepacia MC0-3]
gi|169817950|gb|ACA92532.1| FAD dependent oxidoreductase [Burkholderia cenocepacia MC0-3]
Length = 375
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 183/407 (44%), Gaps = 55/407 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V VVD GATGAG G+ +V + L
Sbjct: 7 DVVVIGAGIVGAACAHEL-AQRGLRVLVVDDA--SGGATGAGMGH--LVAMDDNAAELAL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW+ L+ + D ++ G+L + E+ + + + L G+
Sbjct: 62 SHYSIELWRALSREMPDG-------CAYRNCGTLWLAADAHEMDLARAKQATLAAHGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E + ++ L Q EP L G A +P D+ L A + ++
Sbjct: 115 ELIDAAALAQREPMLRAGLGG-ALKIPGDAILYAPVTANWL---------------LRRA 158
Query: 263 PVTCLLRSNSTG-EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
P L R + + +V + + + +VVA G + +L+ +L P++P
Sbjct: 159 PRVTLRRERAVAVDGPSVTLASGDVLRAERVVVANGVAARTLLPEL----------PLRP 208
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVL 381
+KGHLL+ + + ++H +E GY + S++ G L++
Sbjct: 209 KKGHLLITDRYPG-HVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLLI 258
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
GSSRQF + +VE ++ R+ +RA + P L DL + + G R PDG P+
Sbjct: 259 GSSRQFDTEDAQVEPPVLARMLRRAVGYLPDLADL------NGIRAWTGFRSASPDGLPL 312
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+G P V+LA GHEGLG++ A G+A LVA ++ +D P+
Sbjct: 313 LGEHPARPGVWLAVGHEGLGVTTAPGSARLVAALMAGERPPIDIEPY 359
>gi|330819677|ref|YP_004348539.1| Putative oxidoreductase [Burkholderia gladioli BSR3]
gi|327371672|gb|AEA63027.1| Putative oxidoreductase [Burkholderia gladioli BSR3]
Length = 375
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 186/414 (44%), Gaps = 63/414 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A L L+V V+D G T AG G++ +++ TP +L
Sbjct: 5 DAIVIGAGIVGAACAAALAA-RGLAVEVLDAGGIGGGTTAAGMGHLVVMNDTPA----EL 59
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL + L W+ LA SLR + +++ G+L + EEL + AG+
Sbjct: 60 ALTRDSLARWRALAPSLR-------ECDAYRRCGTLWVAADDEELEAARAMRDGYLAAGV 112
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVA-YIEKGNRHFASKGRYAEF 259
AE + ++ L + EP L A LA Y+E +A
Sbjct: 113 SAEAIGAAALREREP-----------------MLAACLAGGLYVEGDGIVYAPSASEWLL 155
Query: 260 YHDPVTCLLRSNSTGEVEAV-----QTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
H P +R V A+ +T+ S ++VA G L +V
Sbjct: 156 RHSPGAARIRVRERTAVVALAGTELRTAGGETLSAAQVIVANG----------LEAARLV 205
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
+ ++ +KGHLL+ + + + H +E GY+ +H Q S++ A
Sbjct: 206 PGMTLQAKKGHLLITDRYPG-TITHQLLELGYIK---------SAHHAQGTSVAFNAQPR 255
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
G +++GSSRQF + VE ++ R+ RA + P L DL + G R
Sbjct: 256 PTGQILIGSSRQFGSTDPAVEMPVLARMLARATRYLPGLADL------HALRAWTGFRAA 309
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P+IGPVPG + V+LATGHEGLG++ +L TAEL+A +L + P+
Sbjct: 310 TPDGMPLIGPVPGHAGVWLATGHEGLGVTTSLSTAELIATQLLGEVPPIAPEPY 363
>gi|423095827|ref|ZP_17083623.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Q2-87]
gi|397886439|gb|EJL02922.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Q2-87]
Length = 371
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 183/411 (44%), Gaps = 63/411 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG AR L L V V+D GAT AG G++ ++ P +L
Sbjct: 8 DVIVIGAGIIGAACARAL-AQRGLKVLVLD--AGWHGATAAGMGHLLVLDDNPA----EL 60
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL L W+ L+ SL D W+ G+L + EE+ + + L G
Sbjct: 61 ALSQYSLQRWRELSPSLPDG-------CAWRNNGTLWLAANAEEMAVAHSKYLNLLAHGE 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E + S+ L Q EPEL G + + D L A A ++ + + + E
Sbjct: 114 ACELIGSAALRQREPELRKGLEG-GLLIKGDGILYAPAAARWMLEEANIRQQRAQVMEV- 171
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
+ V+ + S A+V+A G ++ TE+ ++P++
Sbjct: 172 --------------DGPRVRLADGRWLSADAVVLANG----------IQATELCPELPIE 207
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + + + H +E GYV P S++ G L
Sbjct: 208 PKKGHLLITDRYPA-TVAHTLVELGYVTSAHNASGP---------SVACNIQPRPTGQLF 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+G+SRQF + +VE ++ ++ KRA ++ P L L + + G R PDG P
Sbjct: 258 IGASRQFGTVDPQVEGWMLAKMLKRAVDYMPGLAQL------NGIRAWTGFRAASPDGLP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
++G P ++LA GHEGLG++ A TA+L+ + +++P A Q
Sbjct: 312 LVGQHPQRKGLWLAVGHEGLGVTTAPATADLLVAQLFN-----ENSPLAPQ 357
>gi|398992762|ref|ZP_10695724.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM21]
gi|398136306|gb|EJM25396.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM21]
Length = 371
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 187/419 (44%), Gaps = 62/419 (14%)
Query: 77 SRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG 136
S+ DVI+IGAGIIG A Q L L V V+D + AT AG G++ ++ P
Sbjct: 2 SQGRVADVIVIGAGIIGAACA-QGLARRGLQVLVLDAGL--HNATAAGMGHLLVLDDNPA 58
Query: 137 SEIWDLALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQ 194
+LAL L W+ A L D ++ G+L + PEE+ + +
Sbjct: 59 ----ELALSDYSLQRWREHAPDLPDG-------CAYRNNGTLWLAANPEEMAVAHSKYLN 107
Query: 195 LCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKG 254
L G+ E + +S L Q EPEL ED L + D +L
Sbjct: 108 LQAQGIACERVGASTLRQREPELR--EDLEGGLL---IKGDGILYAPAT----------- 151
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEA--VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312
A + D R EV+ V+ S +A+V+A G ++ +E
Sbjct: 152 --ANWMLDTPNIHQRRARVTEVDGHRVRLDDGHWLSAEAVVLANG----------VQASE 199
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+ ++P++P+KGHLL+ + + + + H +E GYV ++ + S++
Sbjct: 200 LCPELPIEPKKGHLLITDRYPA-TVTHTLVELGYVT---------SAHNAKGPSVACNIQ 249
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G L +G+SRQF + +VE ++ ++ KRAA + P L L + + G R
Sbjct: 250 PRPTGQLFIGASRQFGTTDPQVEGWMLAKMLKRAAHYMPGLARL------NGIRAWTGFR 303
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
PDG P++G P ++LA GHEGLG++ A GTA+L+ + + + P+ Q
Sbjct: 304 AASPDGLPLVGQHPQRQGLWLAVGHEGLGVTTAPGTADLLVAQLFNETPPLAAQPYLPQ 362
>gi|456386631|gb|EMF52167.1| oxidoreductase [Streptomyces bottropensis ATCC 25435]
Length = 388
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 163/361 (45%), Gaps = 37/361 (10%)
Query: 128 IWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVM 187
+ + + PG E+ +LAL S++LW LA + GL P ++ G L++ PE L
Sbjct: 52 VLVSDKEPGPEL-ELALLSSRLWAELAA---EPGLGP--AFEYEAKGGLVVASAPEGLTA 105
Query: 188 LKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGN 247
L+ AG+ A + + L EP L G + P D+Q+ LA A++ +
Sbjct: 106 LERFAAGQRAAGVEAVSVPAHRLPDLEPHLAPGLAGGVHY-PQDAQVMPTLAAAHLVR-- 162
Query: 248 RHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDL 307
AS R F VT +LRS G V V+T + L++ A+V AAG W G L
Sbjct: 163 ---ASGARL--FTGRTVTEVLRSPD-GAVRGVRTDRGDLHAP-AVVNAAGTWGGELA--- 212
Query: 308 LRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSI 367
+ +PV PR+G +LV E + + H A YV + L
Sbjct: 213 ---ALAGVTLPVLPRRGFVLVTEPLPPM-VRHKVYAADYVAD--------VASDSAALQT 260
Query: 368 SMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKV 427
S G +++G+SR+ GF+ ++ + A +P L + + +
Sbjct: 261 SPVVEGTAAGPVLIGASRERVGFDRTFSLPVVAALAAGATRLFPFL------EGVRAMRS 314
Query: 428 RIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAP 487
G RPYMPD P IGP P +F A GHEG G+ LA GT L+A ++ P ++D P
Sbjct: 315 YAGFRPYMPDHLPAIGPDPRAPGLFHACGHEGAGIGLATGTGRLIAQVLGGRPPELDLTP 374
Query: 488 F 488
F
Sbjct: 375 F 375
>gi|440230440|ref|YP_007344233.1| glycine/D-amino acid oxidase, deaminating [Serratia marcescens
FGI94]
gi|440052145|gb|AGB82048.1| glycine/D-amino acid oxidase, deaminating [Serratia marcescens
FGI94]
Length = 371
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 192/410 (46%), Gaps = 60/410 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI++GAGI+G A QL L V ++D +P GAT AG G++ + P +L
Sbjct: 5 DVIVVGAGIVGSACAWQL-AQRGLRVTLLDNGLP--GATAAGMGHLVCMDDNPA----EL 57
Query: 143 AL--RSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S +LW+ ++ + + W+ G+L + +EL + +++ ++L AG
Sbjct: 58 ALCAYSLRLWREVSALMPEH-------CAWRGCGTLWLAEHDDELALAEQKQRRLAAAGA 110
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
+ +S+ +L + EP L G + +P D + Y R +G A
Sbjct: 111 ESRLVSAGELRRCEPLLRHGL-AGGLLVPGDG-------IVYAPNAARWLVEQGGEAIVR 162
Query: 261 HDPVTCLLRSNSTG-EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
H R ++ E +AV+ + T + +++A G + +L+ + L +
Sbjct: 163 H-------RGDAVALEPQAVRLADGTRLTADTVLLACGLAANTLLAEPL----------L 205
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGN 378
+ +KG L + + + ++ H +E GY G H S++ G
Sbjct: 206 RGKKGQLAITDRYPQ-QVRHQLVELGY----------GASAHASDGTSVAFNLQARPTGQ 254
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++GSSRQF + ++ +++ + +RA +F P L + + + G R DG
Sbjct: 255 LLIGSSRQFDAPDEALDMSLLAAMLRRATQFVPSLAQMNII------RCWTGQRAAAADG 308
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++GP P ++LA GHEGLG++ ALG+A L+AD +L +D+ P+
Sbjct: 309 LPLLGPHPARDGLWLALGHEGLGVTTALGSAALIADRLLRQRPAIDATPY 358
>gi|172063062|ref|YP_001810713.1| FAD dependent oxidoreductase [Burkholderia ambifaria MC40-6]
gi|171995579|gb|ACB66497.1| FAD dependent oxidoreductase [Burkholderia ambifaria MC40-6]
Length = 375
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 191/406 (47%), Gaps = 53/406 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V VVD GATGAG G++ +V +E+ L
Sbjct: 7 DVVVIGAGIVGAACAHEL-AQRGLRVLVVDDA--SGGATGAGMGHL-VVMDDNAAEL-AL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW+ L+ + + ++ G+L + E+ + + + L G+
Sbjct: 62 SHYSIELWRALSGDMPEG-------CAYRNCGTLWLAADSNEMDLARTKQATLAAHGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E + ++ L + EP L G A +P D+ L A +A +++ + + A
Sbjct: 115 ELIDAATLARLEPMLRAGLGG-ALKIPGDAILYAPVAASWLLQRAPGITLRRDRAVAVDG 173
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
P L S +TL +++ +VVA G + +L+ +L P++P+
Sbjct: 174 PGVTL-------------ASGDTLRAER-VVVANGVAARTLLPEL----------PLRPK 209
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHLL+ + + +++H +E GY + S++ G L++G
Sbjct: 210 KGHLLITDRYPG-QVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLLIG 259
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + +E ++ R+ +RAA + P L DL + + G R PDG P++
Sbjct: 260 SSRQFDTEDARIEPPVLARMLRRAAGYLPDLADL------NGIRAWTGFRSASPDGLPLL 313
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A G+A +VA ++ +D P+
Sbjct: 314 GEHPARPGVWLAVGHEGLGVTTAPGSARIVAALMNGERPPIDIEPY 359
>gi|332799540|ref|YP_004461039.1| dimethylglycine dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
gi|438002733|ref|YP_007272476.1| D-amino-acid oxidase [Tepidanaerobacter acetatoxydans Re1]
gi|332697275|gb|AEE91732.1| Dimethylglycine dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
gi|432179527|emb|CCP26500.1| D-amino-acid oxidase [Tepidanaerobacter acetatoxydans Re1]
Length = 397
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 198/400 (49%), Gaps = 41/400 (10%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D ++ G G+IG +IA L + + +++K SG++GA I + + PG + L
Sbjct: 6 DAVVAGGGVIGTSIA-YYLSKKGMEIILLEKDDLASGSSGACDIDIILQSKNPGIHLQ-L 63
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
A+ S K++K LAD L I +K TG +++ ++L ++K+ V++ E GL
Sbjct: 64 AMESAKMYKTLADELDFD-------IEYKATGGMILIENEDQLKVMKDFVRRQKEIGLEV 116
Query: 203 EYLSSSDLLQAEPEL---MVGEDSRAAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAE 258
+ LS + + +P L +VG A + D+ ++ M L A+ A+K A+
Sbjct: 117 KLLSLKEASKIQPGLSPHLVG----ATYSLLDAHVNPMRLCFAFSR------AAKRLGAK 166
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV-LDI 317
Y +R+ ++ +V++V T++ + + I+ AAG ++ + E+V L +
Sbjct: 167 VYLGTSVLDIRAENS-KVKSVITNRGEIKTN-IIINAAGVYAPFI-------GEMVGLSL 217
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
P+KPR+G ++V E+ L + ++ + N L + ++ + G
Sbjct: 218 PIKPRRGQIIVTESVPKLVMADVLCAKYIAAKYNPNILKESDNPETRLGVGLSLSQTRDG 277
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDL-CLADFISNRKVRIGLRPYMP 436
+++GS+R+F G+N + I A P LR++ + F GLRPY P
Sbjct: 278 QILIGSTREFVGYNKNTTHEALHAIVNNAVRLVPALRNIHAIRSFA-------GLRPYTP 330
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
DG P++GPV + +A GHEG G++L+ T ++++D++
Sbjct: 331 DGLPLLGPVENVQGFIMAAGHEGDGIALSPVTGKIISDLI 370
>gi|78062743|ref|YP_372651.1| FAD dependent oxidoreductase [Burkholderia sp. 383]
gi|77970628|gb|ABB12007.1| FAD dependent oxidoreductase [Burkholderia sp. 383]
Length = 375
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 188/407 (46%), Gaps = 55/407 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V VVD GATGAG G+ +V + L
Sbjct: 7 DVVVIGAGIVGAACAHEL-AQRGLRVLVVDDA--SGGATGAGMGH--LVAMDDNAAELAL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW+ L+ + + ++ G+L + E+ + + + L G+
Sbjct: 62 SHYSIELWRALSGEMPEG-------CAYRNCGTLWLAADAHEMDLARAKQATLAAHGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYI-EKGNRHFASKGRYAEFYH 261
E + ++ L Q EP L G A +P D+ L A + ++ ++ R + R
Sbjct: 115 ELIDAATLAQLEPMLRAGLGG-ALKIPGDAILYAPVTANWLLQRAPRITLRRDRAVAVDG 173
Query: 262 DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
VT S +TL +++ ++VA G + +L+ +L P++P
Sbjct: 174 PSVTL--------------ASGDTLRAER-VLVANGVAARTLLPEL----------PLRP 208
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVL 381
+KGHLL+ + + +++H +E GY + S++ G L++
Sbjct: 209 KKGHLLITDRYPG-QVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLLI 258
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
GSSRQF + +VE ++ R+ +RA + P L DL + + G R PDG P+
Sbjct: 259 GSSRQFDTEDAQVEPPVLARMLRRAVGYLPDLADL------NGIRAWTGFRSASPDGLPL 312
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+G P V+LA GHEGLG++ A G+A LVA ++ +D P+
Sbjct: 313 LGEHPARPGVWLAVGHEGLGVTTAPGSARLVAALMAGERPPIDIEPY 359
>gi|21113570|gb|AAM41692.1| D-amino acid oxidase [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66573354|gb|AAY48764.1| D-amino acid oxidase [Xanthomonas campestris pv. campestris str.
8004]
Length = 389
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 200/426 (46%), Gaps = 61/426 (14%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR 133
TA+S ++D+I++GAGI+G A L VA+V+ G+T A G++ +
Sbjct: 15 TAASTRRSYDLIVVGAGIVGAACAEAAAA-EGLRVAIVEPGPIGGGSTAAAMGHLVAMDD 73
Query: 134 TPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
P L+ S +LW+ A+ L + + G+L + R EL + ++
Sbjct: 74 DPAE--LALSAYSLRLWERFAE---------LSEAEFSRCGTLWVARDARELAAVPAKIA 122
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+L AGLRAE + ++ L EP L+ G + +P + AV Y + RH S
Sbjct: 123 RLAAAGLRAEAIDATQLYALEPHLVPGL-AGGMRVPDE-------AVVYPPRVARHLVS- 173
Query: 254 GRYAEFYHDPVTCLLRSN--STGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET 311
+ C ++ + +VE +Q L +A+ SG +
Sbjct: 174 ----------LACTAGAHLFAGRKVEQLQVGGVRLDDGQALAGPVLVASG------VALP 217
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QILSISMT 370
++ ++ ++PRKGHL++ + L + H +E GY HG S++
Sbjct: 218 ALLPELALRPRKGHLVITDRHPGL-IRHQLLELGYA----------DSAHGADDSSVAFN 266
Query: 371 ATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIG 430
G +++GSSRQ+ + + I+ ++ +RA + P LR+L +V G
Sbjct: 267 VQPRPTGQILIGSSRQYGADDRTLSMPILQQMLQRAFAYLPVLREL------QAIRVWTG 320
Query: 431 LRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF-- 488
LRP PDG+P +GPVPG V++A GHEGLG++ ALG+A ++ D +L +D AP+
Sbjct: 321 LRPATPDGRPYLGPVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAIDPAPYAP 380
Query: 489 --AVQG 492
AVQG
Sbjct: 381 ARAVQG 386
>gi|423118497|ref|ZP_17106181.1| hypothetical protein HMPREF9690_00503 [Klebsiella oxytoca 10-5246]
gi|376401566|gb|EHT14173.1| hypothetical protein HMPREF9690_00503 [Klebsiella oxytoca 10-5246]
Length = 369
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 183/407 (44%), Gaps = 59/407 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGI+G A QL V ++D P GAT AG G++ + P +L
Sbjct: 5 DVIVIGAGIVGAACAWQL-AKRGQKVILLDDRQP--GATAAGMGHLVCMDDDPA----EL 57
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL + L W+ L + ++ W+ G+L + TP+EL + +E+ +++ +
Sbjct: 58 ALSAWSLACWRTLTPRMPER-------CAWRGCGTLWLAETPQELEIAREKQRRMAAYQV 110
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
+E + + L+Q EP L G ++P D + Y + R F +
Sbjct: 111 SSEMQTPTQLMQREPLLRAGLQG-GLWVPGDG-------IVYAPEVARWFIADA------ 156
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
D +TCL + AV + AIVVA G + L+ + ++
Sbjct: 157 GDNLTCLSEGATEIAEPAVTLTSGKRLRAPAIVVACGLGANGLLGENW----------LR 206
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KG L + + + L L+H +E GY G HG S++ G L+
Sbjct: 207 PKKGQLAITDRYGPL-LHHQLVELGY----------GASAHGGGTSVAFNVQPRPTGQLL 255
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF +++ ++ ++ RA F P L L + S G R DG P
Sbjct: 256 IGSSRQFDHSERQLDLPLLAQMLDRARHFLPPLAGLNIIRCWS------GFRAASEDGNP 309
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL--TNPLKVDS 485
+IGP P ++LA GHEGLG++ A +A L+ +L +PL D+
Sbjct: 310 LIGPHPSRPGLWLALGHEGLGVTTAPASAALLVAQLLGERSPLAPDA 356
>gi|77747888|ref|NP_637768.2| D-amino acid oxidase [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|77761162|ref|YP_242784.2| D-amino acid oxidase [Xanthomonas campestris pv. campestris str.
8004]
gi|188991147|ref|YP_001903157.1| FAD-dependent oxidoreductase [Xanthomonas campestris pv. campestris
str. B100]
gi|167732907|emb|CAP51103.1| FAD-dependent oxidoreductase [Xanthomonas campestris pv.
campestris]
Length = 409
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 200/426 (46%), Gaps = 61/426 (14%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR 133
TA+S ++D+I++GAGI+G A L VA+V+ G+T A G++ +
Sbjct: 35 TAASTRRSYDLIVVGAGIVGAACAEAAAA-EGLRVAIVEPGPIGGGSTAAAMGHLVAMDD 93
Query: 134 TPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
P L+ S +LW+ A+ L + + G+L + R EL + ++
Sbjct: 94 DPAE--LALSAYSLRLWERFAE---------LSEAEFSRCGTLWVARDARELAAVPAKIA 142
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+L AGLRAE + ++ L EP L+ G + +P + AV Y + RH S
Sbjct: 143 RLAAAGLRAEAIDATQLYALEPHLVPGL-AGGMRVPDE-------AVVYPPRVARHLVS- 193
Query: 254 GRYAEFYHDPVTCLLRSN--STGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET 311
+ C ++ + +VE +Q L +A+ SG +
Sbjct: 194 ----------LACTAGAHLFAGRKVEQLQVGGVRLDDGQALAGPVLVASG------VALP 237
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QILSISMT 370
++ ++ ++PRKGHL++ + L + H +E GY HG S++
Sbjct: 238 ALLPELALRPRKGHLVITDRHPGL-IRHQLLELGYA----------DSAHGADDSSVAFN 286
Query: 371 ATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIG 430
G +++GSSRQ+ + + I+ ++ +RA + P LR+L +V G
Sbjct: 287 VQPRPTGQILIGSSRQYGADDRTLSMPILQQMLQRAFAYLPVLREL------QAIRVWTG 340
Query: 431 LRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF-- 488
LRP PDG+P +GPVPG V++A GHEGLG++ ALG+A ++ D +L +D AP+
Sbjct: 341 LRPATPDGRPYLGPVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAIDPAPYAP 400
Query: 489 --AVQG 492
AVQG
Sbjct: 401 ARAVQG 406
>gi|170780523|ref|YP_001708855.1| GntR family transcriptional regulator [Clavibacter michiganensis
subsp. sepedonicus]
gi|169155091|emb|CAQ00190.1| putative GntR-family transcriptional regulator and oxidoreductase
fusion protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 685
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 181/391 (46%), Gaps = 31/391 (7%)
Query: 101 LVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160
L + + V VV++ SG + G+G I + + PG+E+ +LA + + W +A L D+
Sbjct: 297 LARAGIRVTVVERAAVASGTSAQGEGNILVSDKGPGAEL-ELAQLAARRWPEVAAELADE 355
Query: 161 GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVG 220
D L I ++ G L++ T E L AG++A + L+ EP L
Sbjct: 356 LGDALPSIEYEPKGGLVVTTTDEGADPLLAFAATQRSAGVQAVPVDRRRALELEPWLNPA 415
Query: 221 EDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQ 280
+ A P D+Q+ +A + R + R P+ ++ G + V+
Sbjct: 416 ITA-AVHYPEDAQVQPAIATEALAASARRAGAVVRTGVEVVGPIL-----DADGALRGVR 469
Query: 281 TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHA 340
TS + + +++AAG WSG + L +++PV PR+G +LV ++ H
Sbjct: 470 TSAGDIAADD-VLIAAGPWSGEVARAL------GVELPVLPRRGVVLVTTRMPH-RIRHK 521
Query: 341 SMEAGYVGHHDLTLHPGQVNHGQ-ILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTII 399
+ YVG V G L S + G +++GSSR+ GF+ + ++
Sbjct: 522 VYDGDYVG---------AVGSGDGALQTSGVVESTPSGTVLIGSSRERVGFDASLRVAVL 572
Query: 400 DRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEG 459
+ + +A +P L + + + G RPY+PD PV+GP P L ++ A+GHEG
Sbjct: 573 EELAAKAVRLFPFLVE------ANAMRSYGGFRPYLPDHLPVVGPDPRLPGLWHASGHEG 626
Query: 460 LGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
G+ L++ TA+L+A + +D PF+V
Sbjct: 627 AGIGLSVATADLIAAQMTGETTPLDVRPFSV 657
>gi|77748662|ref|NP_642864.2| D-amino acid oxidase [Xanthomonas axonopodis pv. citri str. 306]
Length = 425
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 186/419 (44%), Gaps = 67/419 (15%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR 133
+A+ ++D+I+IGAGI+G A L VA+V+ G+T A G++ +
Sbjct: 51 SAAGTRRSYDLIVIGAGIVGAACAEAAAG-EGLRVAIVEPGPIGGGSTAAAMGHLVAMDD 109
Query: 134 TPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
P L+ S +LW+ A L + + G+L + R EL + ++
Sbjct: 110 DPAE--LALSAYSLRLWERFAT---------LSEAEFSRCGTLWVARDARELAAVPAKIA 158
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVG-------EDSRAAFLPYDSQLDAMLAVAYIEKG 246
+L AGL AE + ++ L EP+L+ G D + P ++ L A G
Sbjct: 159 RLATAGLHAEAIDAAQLYALEPQLVPGLAGGMRVPDEAVVYPP---RVARHLVGAACTSG 215
Query: 247 NRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHD 306
R FA + R + + AV+ + +V SG +
Sbjct: 216 ARLFAGR-RVVQL---------------QEHAVRLDDGQTLAGPVLVA-----SGVALPQ 254
Query: 307 LLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QIL 365
LL E + ++PRKGHL++ + L + H +E GY HG
Sbjct: 255 LLPE------LALRPRKGHLVITDRHPGL-IRHQLLELGYA----------DSAHGADDT 297
Query: 366 SISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNR 425
S++ G +++GSSRQF + + ++ ++ +RA + P LR+L
Sbjct: 298 SVAFNVQPRPTGQILIGSSRQFGEHDRALSMPVLQQMLQRAFAYLPVLREL------QAI 351
Query: 426 KVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVD 484
+V GLRP PDG+P +G VPG V++A GHEGLG++ ALG+A ++ D +L +D
Sbjct: 352 RVWTGLRPATPDGRPYLGKVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAID 410
>gi|418520513|ref|ZP_13086562.1| D-amino acid oxidase [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|410703894|gb|EKQ62382.1| D-amino acid oxidase [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
Length = 386
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 184/412 (44%), Gaps = 53/412 (12%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR 133
+A+ ++D+I+IGAGI+G A L VA+V+ G+T A G++ +
Sbjct: 12 SAAGTRRSYDLIVIGAGIVGAACAEAAAG-EGLRVAIVEPGPIGGGSTAAAMGHLVAMDD 70
Query: 134 TPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
P L+ S +LW+ A L + + G+L + R EL + ++
Sbjct: 71 DPAE--LALSAYSLRLWERFAT---------LSEAEFSRCGTLWVARDARELAAVPAKIA 119
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+L AGL AE + ++ L EP+L+ G + +P + AV Y + RH
Sbjct: 120 RLATAGLHAEAIDAAQLYALEPQLVPGL-AGGMRVPDE-------AVVYPPRVARHLVGA 171
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
T R + V +Q L + + SG + LL E
Sbjct: 172 A---------CTSGARLFAGRRVVQLQEHAVRLDDGQTLAGPVLVASGVALPQLLPE--- 219
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QILSISMTAT 372
+ ++PRKGHL++ + L + H +E GY HG S++
Sbjct: 220 ---LALRPRKGHLVITDRHPGL-IRHQLLELGYA----------DSAHGADDTSVAFNVQ 265
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G +++GSSRQF + + ++ ++ +RA + P LR+L +V GLR
Sbjct: 266 PRPTGQILIGSSRQFGEHDRALSMPVLQQMLQRAFAYLPVLREL------QAIRVWTGLR 319
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVD 484
P PDG+P +G VPG V++A GHEGLG++ ALG+A ++ D +L +D
Sbjct: 320 PATPDGRPYLGKVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAID 371
>gi|418517137|ref|ZP_13083304.1| D-amino acid oxidase [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
gi|21108820|gb|AAM37400.1| D-amino acid oxidase [Xanthomonas axonopodis pv. citri str. 306]
gi|410706194|gb|EKQ64657.1| D-amino acid oxidase [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
Length = 383
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 184/412 (44%), Gaps = 53/412 (12%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR 133
+A+ ++D+I+IGAGI+G A L VA+V+ G+T A G++ +
Sbjct: 9 SAAGTRRSYDLIVIGAGIVGAACAEAAAG-EGLRVAIVEPGPIGGGSTAAAMGHLVAMDD 67
Query: 134 TPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
P L+ S +LW+ A L + + G+L + R EL + ++
Sbjct: 68 DPAE--LALSAYSLRLWERFAT---------LSEAEFSRCGTLWVARDARELAAVPAKIA 116
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+L AGL AE + ++ L EP+L+ G + +P + AV Y + RH
Sbjct: 117 RLATAGLHAEAIDAAQLYALEPQLVPGL-AGGMRVPDE-------AVVYPPRVARHLVGA 168
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
T R + V +Q L + + SG + LL E
Sbjct: 169 A---------CTSGARLFAGRRVVQLQEHAVRLDDGQTLAGPVLVASGVALPQLLPE--- 216
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QILSISMTAT 372
+ ++PRKGHL++ + L + H +E GY HG S++
Sbjct: 217 ---LALRPRKGHLVITDRHPGL-IRHQLLELGYA----------DSAHGADDTSVAFNVQ 262
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G +++GSSRQF + + ++ ++ +RA + P LR+L +V GLR
Sbjct: 263 PRPTGQILIGSSRQFGEHDRALSMPVLQQMLQRAFAYLPVLREL------QAIRVWTGLR 316
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVD 484
P PDG+P +G VPG V++A GHEGLG++ ALG+A ++ D +L +D
Sbjct: 317 PATPDGRPYLGKVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAID 368
>gi|126641372|ref|YP_001084356.1| hypothetical protein A1S_1326 [Acinetobacter baumannii ATCC 17978]
Length = 325
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 151/349 (43%), Gaps = 50/349 (14%)
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
L+ S +LW L L + ++QT +L + +PEE+ + +E+ ++L G+R
Sbjct: 16 LSHWSVQLWHELGHELSED-------CAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVR 68
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYH 261
+ ++ ++ Q EP L G D L A A ++ K H
Sbjct: 69 CQLRNADEVHQLEPHLKQGLYGGLEVFD-DGILYAPCAAEWLLKKFPH------------ 115
Query: 262 DPVTCLLRSNSTGEVEA--VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
++ +E VQ S T IV+A G + T+ ++P+
Sbjct: 116 ---KVQVQQTKVIHIEENRVQLSDGTWLEAAHIVLANG----------IHATDFFPELPI 162
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+P+KGHL + + + L + H + Y Q G +S++ G L
Sbjct: 163 EPKKGHLAITDRYPELNVKHTLVALAYAA-------STQATSG--ISVACNIQPRPTGQL 213
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
+GSSRQF + VE + R+ K A +++P L DL + + G R PDG
Sbjct: 214 FIGSSRQFNTVDPTVEPEVFTRVLKEAVDYFPALADLNVI------RAWTGFRAATPDGI 267
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PVIG P V+LA GHEGLG++ A GTA+L+A + +D PF
Sbjct: 268 PVIGQHPAFQSVYLAVGHEGLGVTTATGTAKLIASHICGLTFDIDPEPF 316
>gi|319650532|ref|ZP_08004672.1| glycine oxidase [Bacillus sp. 2_A_57_CT2]
gi|317397713|gb|EFV78411.1| glycine oxidase [Bacillus sp. 2_A_57_CT2]
Length = 391
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 177/377 (46%), Gaps = 44/377 (11%)
Query: 107 SVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQ 166
+V V++K SG + G I + + PG + ++L S KL L+ L+ Q
Sbjct: 29 NVTVIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVDELSRELK-------Q 80
Query: 167 VIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGED 222
++ GS+L+ T EE+ ++ V + EAGL L D+ Q +L+ G +
Sbjct: 81 PFEYRAPGSILVCETEEEMEAAQKWVDRQSEAGLPFRMLDRQDIRQDSKYFADDLLGGLE 140
Query: 223 SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS 282
DS ++ L + +G + +K VT + R T +V+TS
Sbjct: 141 CAT-----DSTVNPYLLAFNLLEGAKEMGAKAHK----QTEVTGMRRK--TDGTFSVETS 189
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
T ++ ++ AAG W+ + ++L L IP+KPRKGH++V + + M
Sbjct: 190 NGT-FTANYVINAAGVWA-PYIGEMLD-----LSIPIKPRKGHIMVASRQDFVGPRKV-M 241
Query: 343 EAGYVGHH---DLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTII 399
E GY+ + P +G L T + N ++GSSR+F GFNT++ II
Sbjct: 242 EFGYLISKFGGKRQVDPITEKYGVALVFEPTESQ----NFLIGSSREFVGFNTKINNEII 297
Query: 400 DRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEG 459
I RA FYPK+ D+ + + GLRP+ D P++ V G+ ++A GHEG
Sbjct: 298 KCIANRAIRFYPKMADMMVI------RTYAGLRPWTEDHLPIVSEVEGIPNYYIAAGHEG 351
Query: 460 LGLSLALGTAELVADMV 476
G+SLA T +++ +M+
Sbjct: 352 DGISLAAVTGKVIEEML 368
>gi|398891690|ref|ZP_10644997.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM55]
gi|398186561|gb|EJM73932.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM55]
Length = 371
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 181/411 (44%), Gaps = 58/411 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A Q L L V V+D + GAT AG G++ ++ P +L
Sbjct: 8 DVIVIGAGIIGAACA-QALARRGLQVLVLDAGL--HGATAAGMGHLLVLDDNPA----EL 60
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL L W+ L L D ++ G+L + EE+V+ + L G+
Sbjct: 61 ALSQYSLQRWRELGADLPDS-------CDYRCNGTLWLAANAEEMVVAHSKFLNLQAQGV 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E + +S L Q EPEL G + + D L A ++ + + R +
Sbjct: 114 ACELIGASALRQREPELSEGLEG-GLLINGDGILYAPATARWMLQTPNLRQRRARVSAVD 172
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
+ V CL S A+V+A G ++ E+ ++P++
Sbjct: 173 GNRV-CL--------------DDGHWLSADAVVLANG----------IQANELCPELPIE 207
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + + H +E GYV P S + G L
Sbjct: 208 PKKGHLLITDRYPG-SVTHTLVELGYVTSAHNATGP---------STACNIQPRPTGQLF 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+G+SRQF + +VE ++ ++ KRAAE+ P L L + + G R PDG P
Sbjct: 258 IGASRQFGTTDPQVEGWMLAKMLKRAAEYMPGLARL------NGIRAWTGFRAASPDGLP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
++G P ++LA GHEGLG++ A GTA+L+ + + + P+ Q
Sbjct: 312 LVGQHPQRQGLWLAVGHEGLGVTTAPGTADLLVAQLFNETPPLAAQPYLPQ 362
>gi|206563119|ref|YP_002233882.1| putative FAD-binding oxidoreductase [Burkholderia cenocepacia
J2315]
gi|421864936|ref|ZP_16296621.1| D-amino-acid oxidase [Burkholderia cenocepacia H111]
gi|198039159|emb|CAR55123.1| putative FAD-binding oxidoreductase [Burkholderia cenocepacia
J2315]
gi|358075556|emb|CCE47499.1| D-amino-acid oxidase [Burkholderia cenocepacia H111]
Length = 375
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 184/406 (45%), Gaps = 53/406 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V VVD GATGAG G+ +V + L
Sbjct: 7 DVVVIGAGIVGAACAHEL-AQRGLRVLVVDDA--SGGATGAGMGH--LVAMDDNAAELAL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW+ L+ + D ++ G+L + E+ + + + L G+
Sbjct: 62 SHYSIELWRALSGEMPDG-------CAYRNCGTLWLAADAHEMDLARAKQATLAAHGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E + ++ L Q EP L G A +P D+ L A + ++ + + A
Sbjct: 115 ELIDAAALAQLEPMLRAGLGG-ALKIPGDAILYAPVTANWLLQRAPRVTVRRERAVAVDG 173
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
P L S + L +++ +VVA G + +L+ +L P++P+
Sbjct: 174 PSVTL-------------ASGDVLRAER-VVVANGVAARTLLPEL----------PLRPK 209
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHLL+ + + ++H +E GY + S++ G L++G
Sbjct: 210 KGHLLITDRYPG-HVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLLIG 259
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + +VE ++ R+ +RA + P L DL + + G R PDG P++
Sbjct: 260 SSRQFDTEDAQVEPPVLARMLRRAVGYLPALADL------NGIRAWTGFRSASPDGLPLL 313
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P V+LA GHEGLG++ A G+A LVA ++ ++ P+
Sbjct: 314 GEHPARPGVWLAVGHEGLGVTTAPGSARLVAALMAGERPPIEIEPY 359
>gi|226314149|ref|YP_002774045.1| oxidoreductase [Brevibacillus brevis NBRC 100599]
gi|226097099|dbj|BAH45541.1| putative oxidoreductase [Brevibacillus brevis NBRC 100599]
Length = 397
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 189/396 (47%), Gaps = 55/396 (13%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L V V++K SG + G I + + PG + ++L+S +ML D L L+
Sbjct: 30 LDVVVLEKGELASGTSSRCDGNILAIDKDPGFD-SQMSLKS----QMLVDQL---SLELD 81
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGE 221
++ GS+L+ + E+ E V++ EAGL L +D+ Q P +L+ G
Sbjct: 82 HTFEYRAPGSILVCESEAEMEAAHEWVRRQKEAGLPFRMLDRADIRQESPYFADDLLGGL 141
Query: 222 D--SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAV 279
+ + + PY ML A E +H A R E V L +TG +
Sbjct: 142 ECATDSTVNPY------MLTFALFEGAKKHGARIMRRTE-----VKSLRCDQATGTFH-I 189
Query: 280 QTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNH 339
++ +K+ +V AAG W+ + I +DIP+ PRKGHL+V + +
Sbjct: 190 GLGTGSMTAKQ-VVNAAGVWAPVI------GKMIGVDIPIVPRKGHLIVASRQMPVGVRK 242
Query: 340 ASMEAGYVGHHDLTLHPG--QVNH-GQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
ME GY+ ++ G QV+ + +++ N ++GSSRQFAGF+T+++
Sbjct: 243 V-MEFGYL----ISKFGGVRQVDEETEKYGVALVFEPTESQNFLIGSSRQFAGFDTQIDL 297
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
++ + +RA FYPK+ D + + GLRP+ D P+I V + F+A G
Sbjct: 298 NVVRCMARRALRFYPKIADFAII------RTYCGLRPWTEDHLPIISRVEEVPGYFIAAG 351
Query: 457 HEGLGLSLALGTAELVADMVL--------TNPLKVD 484
HEG G+SLA T +LV++M++ T PL++D
Sbjct: 352 HEGDGISLAAVTGKLVSEMLVDQTDTIIPTEPLRLD 387
>gi|398840440|ref|ZP_10597676.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM102]
gi|398110725|gb|EJM00623.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM102]
Length = 371
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 176/392 (44%), Gaps = 58/392 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A Q L L V V+D + GAT AG G++ ++ P +L
Sbjct: 8 DVIVIGAGIIGAACA-QALARRGLQVLVLDAGL--HGATAAGMGHLLVLDDNPA----EL 60
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL L W+ LA L D ++ G+L + EE+ + + L G+
Sbjct: 61 ALSQYSLQRWRELAPDLPDG-------CAYRNNGTLWLAANAEEMAVAHSKYLNLKAQGV 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E +S+S L Q EPEL G + + D L A ++ + R +
Sbjct: 114 ACELISASALRQREPELREGLEG-GLLINGDGILYAPATANWMLDTPNIRQRRARVSAVD 172
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
+ V CL S +A+V+A G ++ E+ ++P++
Sbjct: 173 GNRV-CL--------------DDGHWLSAEAVVLANG----------IQANELCPELPIE 207
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + + H +E GYV P S + G L
Sbjct: 208 PKKGHLLITDRYPR-TVTHTLVELGYVTSAHNATGP---------STACNIQPRPTGQLF 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+G+SRQF + +VE ++ ++ KRAAE+ P L L + + G R PDG P
Sbjct: 258 IGASRQFGTTDPQVEGWMLAKMLKRAAEYMPGLARL------NGIRAWTGFRAASPDGLP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELV 472
++G P ++LA GHEGLG++ A GTA+L+
Sbjct: 312 LVGQHPQRQGLWLAVGHEGLGVTTAPGTADLL 343
>gi|359423722|ref|ZP_09214849.1| putative oxidoreductase [Gordonia amarae NBRC 15530]
gi|358241080|dbj|GAB04431.1| putative oxidoreductase [Gordonia amarae NBRC 15530]
Length = 391
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 179/388 (46%), Gaps = 39/388 (10%)
Query: 103 GSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGL 162
G+ LSV VV++ SG++ + +G + + + PG E+ DLAL S+++W AD L D
Sbjct: 27 GAGLSVTVVERGAIVSGSSSSCEGNLLVSDKEPGPEL-DLALYSHRVW---ADELVD--F 80
Query: 163 DPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGED 222
L +K G L++ T E L + ++ AG+ + + ++ EP L +
Sbjct: 81 RALWEFDFK--GGLVVAATTEGRDGLTDLAERQRAAGVIVQDVPLDEVPTLEPHL-TRDI 137
Query: 223 SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD-PVTCLLRSNSTGEVEAVQT 281
+ AAF P D Q+ +L A++ + ++ R A + D PVT + + V V+T
Sbjct: 138 ASAAFYPQDCQVQPILLAAHLLR-----MARSRGATVHTDTPVTGFVTAGD--RVTGVRT 190
Query: 282 SKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHAS 341
S + S +V AG W+G + +PV PR+G +LV E +
Sbjct: 191 SSGEI-SAPIVVNCAGAWAGEVAALAGNH------LPVLPRRGFVLVTEPLPPTVFHKV- 242
Query: 342 MEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDR 401
Y G + G L S G +++GSSR+ GF+ I
Sbjct: 243 ----YAGEYVAATQSGDAG----LQTSTVIEGTEGGTVLIGSSRERVGFDKTPSLPAIRE 294
Query: 402 IWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLG 461
I +A YP LR +S + +G RPY PD PVIG P ++ ATGHEG G
Sbjct: 295 IAAKALRLYPSLRQ------VSVMRTYLGFRPYCPDHLPVIGEDPRTPGLWHATGHEGAG 348
Query: 462 LSLALGTAELVADMVLTNPLKVDSAPFA 489
+ L++GTA+L+ + P ++ PFA
Sbjct: 349 IGLSVGTAKLLVQAMTGQPTELPLTPFA 376
>gi|294626159|ref|ZP_06704765.1| D-amino acid oxidase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292599511|gb|EFF43642.1| D-amino acid oxidase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
Length = 425
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 186/419 (44%), Gaps = 67/419 (15%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR 133
+A+ ++D+I+IGAGI+G A L VA+V+ G+T A G++ +
Sbjct: 51 SAAGTRRSYDLIVIGAGIVGAACAEAAAG-EGLRVAIVEPGPIGGGSTAAAMGHLVAMDD 109
Query: 134 TPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
P L+ S +LW+ A L + + G+L + R EL + ++
Sbjct: 110 DPAE--LALSAYSLRLWERFAT---------LSEAEFSRCGTLWVARDARELAAVPAKIA 158
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVG-------EDSRAAFLPYDSQLDAMLAVAYIEKG 246
+L AGL AE + ++ L EP+L+ G D + P ++ L A G
Sbjct: 159 RLATAGLHAEAIDAAQLYALEPQLVPGLAGGMRVPDEAVVYPP---RVARHLVGAACTSG 215
Query: 247 NRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHD 306
R FA + R + + AV+ + +V SG +
Sbjct: 216 ARLFAGR-RVVQL---------------QEHAVRLDDGQTLAGPVLVA-----SGVALPQ 254
Query: 307 LLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QIL 365
LL E + ++PRKGHL++ + L + H +E GY HG
Sbjct: 255 LLPE------LALRPRKGHLVITDRHPGL-IRHQLLELGYA----------DSAHGADDT 297
Query: 366 SISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNR 425
S++ G +++GSSRQF + + ++ ++ +RA + P LR+L
Sbjct: 298 SVAFNVQPRPTGQILIGSSRQFGEHDRALSMPVLQQMLQRAFAYLPVLREL------QAI 351
Query: 426 KVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVD 484
+V GLRP PDG+P +G VPG V++A GHEGLG++ ALG+A ++ D +L +D
Sbjct: 352 RVWTGLRPATPDGRPYLGMVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAID 410
>gi|325289254|ref|YP_004265435.1| glycine oxidase [Syntrophobotulus glycolicus DSM 8271]
gi|324964655|gb|ADY55434.1| Glycine oxidase [Syntrophobotulus glycolicus DSM 8271]
Length = 373
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 176/360 (48%), Gaps = 33/360 (9%)
Query: 119 GATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLI 178
G + A +G + M + PG ++ ++AL+S L+ L+++L G D + +++ G L++
Sbjct: 41 GTSSACEGTVIMQSKAPGPKL-EMALQSRALYASLSETL---GYD----VEYEERGGLVV 92
Query: 179 GRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAML 238
++ ++ +++ GL+ + L+ + + EP L+ AA+ D Q++ +L
Sbjct: 93 IENEQQAAIMLNTIEKQRSFGLKVDLLNIKETRELEP-LLSENLWGAAYSEADGQVNPIL 151
Query: 239 AVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGC 298
+ + R VT LL +G+V V TS+ +Y+ +V AAG
Sbjct: 152 VARAYSRAAARLGAGIRVGVN----VTSLLVE--SGQVRGVMTSEGPVYAD-CVVNAAGV 204
Query: 299 WSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG--HHDLTLHP 356
W+ +L E +V PR+G +LV E L +NH + A Y+ HH L
Sbjct: 205 WASALTAPHGYEPSLV------PRRGQILVSEPLPPL-INHIVLCACYLAAKHHPELLDR 257
Query: 357 GQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDL 416
+H L + G L++GS+R+FAGFN E I + + A + +P+L +
Sbjct: 258 NNRHHR--LGVGTVIEQTAAGQLLIGSTREFAGFNDETTLEGIKSVAEHAVKLFPRLGKV 315
Query: 417 CLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
+ S GLRP DG PVIGPV L + +ATGHEG G++LA T L+AD+V
Sbjct: 316 NIIRTFS------GLRPKTADGMPVIGPVESLPGLIMATGHEGDGIALAPITGTLIADLV 369
>gi|398910386|ref|ZP_10655004.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM49]
gi|398185848|gb|EJM73237.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM49]
Length = 371
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 180/411 (43%), Gaps = 58/411 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A Q L L V V+D + GAT AG G++ ++ P +L
Sbjct: 8 DVIVIGAGIIGAACA-QALARRGLQVLVLDAGL--HGATAAGMGHLLVLDDNPA----EL 60
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL L W+ L L D ++ G+L + EE+ + + L G+
Sbjct: 61 ALSQYSLQRWRELGADLPDS-------CAYRCNGTLWLAANAEEMAVAHSKFLNLQAQGV 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E + +S L Q EPEL G + + D L A ++ + + R +
Sbjct: 114 ACELIGASALSQREPELSEGLEG-GLLINGDGILYAPATAGWMLETPNIRQRRARVSAVD 172
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
+ V CL S A+V+A G ++ E+ ++P++
Sbjct: 173 GNRV-CL--------------DDGHWLSADAVVLANG----------IQANELCPELPIE 207
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + + H +E GYV P S + G L
Sbjct: 208 PKKGHLLITDRYPG-SVTHTLVELGYVTSAHNATGP---------STACNIQPRPTGQLF 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+G+SRQF + +VE ++ ++ KRAAE+ P L L + + G R PDG P
Sbjct: 258 IGASRQFGTTDPQVEGWMLAKMLKRAAEYMPGLARL------NGIRAWTGFRAASPDGLP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
++G P ++LA GHEGLG++ A GTA+L+ + + + P+ Q
Sbjct: 312 LVGQHPQRQGLWLAVGHEGLGVTTAPGTADLLVAQLFNETPPLAAQPYLPQ 362
>gi|37526155|ref|NP_929499.1| hypothetical protein plu2242 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785585|emb|CAE14535.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 375
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 185/414 (44%), Gaps = 60/414 (14%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE 138
C DVII+GAGI+G A QL V L V V+D GAT AG G++ + P
Sbjct: 4 CQISDVIIVGAGIVGAACAYQL-VQDGLRVVVIDN--GGKGATQAGMGHLVCMDDNPA-- 58
Query: 139 IWDLALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+LAL S L W+ + + W+ G+L + +E+ + +E+ +L
Sbjct: 59 --ELALSSYSLDIWRTFTPHMPEN-------CAWRGCGTLWLADAEDEMALAEEKSARLA 109
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVA-YIEKGNRHFAS-KG 254
G+ ++++ + Q EP + G + +P D + A V ++ GN KG
Sbjct: 110 AYGIENMPMTATQIHQMEPMVRRG-IAGGLSVPGDGMVYAPNVVHWFLASGNEKIQFIKG 168
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
+ P T +LR Y I++A G WS T ++
Sbjct: 169 QVHAL--KPQTVVLRDGKK-------------YCAPRILLANGLWS----------THLL 203
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
++P+ P+KG L + + + + + H +E GY + SI+
Sbjct: 204 PELPLVPKKGQLAITDRYPTC-ITHQLVELGY---------SASTHASNGTSIAFNVQAR 253
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
G L++GSSRQF ++ ++ + +RA F P+L + + S G R
Sbjct: 254 PTGQLLIGSSRQFHNEKHTIDLGLLRSMLQRALHFLPQLGQMNILRCWS------GFRAA 307
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P++G P ++LA GHEGLG++ A G+A++++ ++L + ++D P+
Sbjct: 308 TPDGLPLLGQHPAYEWLWLAVGHEGLGVTTAPGSAKIISALMLNSKTEIDPLPY 361
>gi|390455133|ref|ZP_10240661.1| sarcosine oxidase subunit beta [Paenibacillus peoriae KCTC 3763]
Length = 406
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 180/390 (46%), Gaps = 39/390 (10%)
Query: 104 SDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLD 163
S L V + ++ G + G I + + PG + ++L S +L LA L D+
Sbjct: 27 SGLKVVLAERGEIAGGTSSRCDGNILAIDKEPGFDS-RMSLVSQELVAELARELEDE--- 82
Query: 164 PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDS 223
++ GS+L+ +E+ ++ V + + GL L L + P L
Sbjct: 83 ----FEYRAPGSILVCENEQEMQAAEQWVARQQQEGLPFRMLDQQALRKEWPHL------ 132
Query: 224 RAAFLP--YDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT 281
A LP + D+ + + A + P+ +L+ + G V V+T
Sbjct: 133 -AKDLPGGLECATDSTVNPVLMTYALARAARRMGARLLPRTPIQSVLK-DEGGNVHGVET 190
Query: 282 SKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHAS 341
+++ A+V+AAG W+ S+ L L +P+ PRKGH+LV S+ N
Sbjct: 191 PNGVIHAD-AVVLAAGVWTRSIGRSL------GLSLPIMPRKGHILVSARMPSIG-NRKV 242
Query: 342 MEAGYVGHHDLTLHPGQVNHGQILS---ISMTATTDVIGNLVLGSSRQFAGFNTEVEQTI 398
ME GY+ ++ GQ + ++ +++ N+++GSSRQF G +T V+Q +
Sbjct: 243 MEFGYL----MSKFGGQRSVDEVYEKYGVALVFEPTASQNILIGSSRQFVGMDTGVDQQV 298
Query: 399 IDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHE 458
I I +RA F+P L ++ L + GLRP+ PD P+I V + +F+A+GHE
Sbjct: 299 IRLIARRAIRFFPALANVPLM------RAYTGLRPWTPDHLPIISAVDEVPGLFIASGHE 352
Query: 459 GLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G G+SLA T +LV +MV P + P
Sbjct: 353 GDGISLAAVTGKLVTEMVRGEPTCIPVEPL 382
>gi|253989627|ref|YP_003040983.1| conserved hypothetical protein [Photorhabdus asymbiotica]
gi|253781077|emb|CAQ84239.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 372
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 182/410 (44%), Gaps = 61/410 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVII+GAGI+G A QL V LSVAV+D GAT AG G++ + P +L
Sbjct: 8 DVIIVGAGIVGAACAYQL-VQDGLSVAVIDD--GGKGATQAGMGHLVCMDDNPA----EL 60
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S L W+ + + W+ G+L + +++ + +E+ G+
Sbjct: 61 ALSSYSLDIWRTFTSHMPEN-------CAWRGCGTLWLADEEDDMALAEEKSAHFANYGI 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
++++ + Q EP + G + +P D + A V + A+ F
Sbjct: 114 ENILMTATQIHQIEPMVKAG-IAGGLCVPGDGIVYAPNVVHWF------LAACNEKIHFI 166
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
V L E ++V + Y I++A G WS T ++ ++P+
Sbjct: 167 KGQVHAL-------EPQSVVLNDGKKYYAPRILLANGLWS----------THLLPELPIF 209
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVG--HHDLTLHPGQVNHGQILSISMTATTDVIGN 378
P+KG L + + + + H +E GY H D T S + G
Sbjct: 210 PKKGQLAITDRYPPC-ITHQLVELGYSASAHDDGT------------STAFNVQARPTGQ 256
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++GSSRQ ++ T++ + +RA F P+L + + S G R PDG
Sbjct: 257 LLIGSSRQLYNEKPTIDLTLLRSMLQRALHFLPQLGQMNILRCWS------GFRATTPDG 310
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++G P ++LA GHEGLG++ A G+A ++A ++L ++D +P+
Sbjct: 311 LPLLGQHPDCEWLWLAVGHEGLGVTTAPGSARIIAALMLNRKTEIDPSPY 360
>gi|399056368|ref|ZP_10743724.1| glycine/D-amino acid oxidase, deaminating [Brevibacillus sp. CF112]
gi|398046181|gb|EJL38814.1| glycine/D-amino acid oxidase, deaminating [Brevibacillus sp. CF112]
Length = 397
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 185/396 (46%), Gaps = 55/396 (13%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L V V++K SG + G I + + PG + ++L+S L L L
Sbjct: 30 LDVVVLEKGELASGTSSRCDGNILAIDKDPGFD-SQMSLQSQMLVAQLTRELE------- 81
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGE 221
++ GS+L+ + E+ E V++ EAGL L +D+ Q P +L+ G
Sbjct: 82 HSFEYRALGSILVCESEAEMEAANEWVRRQKEAGLPFRMLDRADIRQESPYFADDLLGGL 141
Query: 222 D--SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAV 279
+ + + PY ML A E +H A R E V L R +TG + +
Sbjct: 142 ECATDSTVNPY------MLTFALFEGAKKHGAKIMRRTE-----VKALRRDEATGAFQ-L 189
Query: 280 QTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNH 339
+ S ++ +++ +V AAG W+ + + +DIP+ PRKGHLLV + L
Sbjct: 190 ELSTGSMTARQ-VVNAAGVWAPVIGQ------MVGVDIPIVPRKGHLLVASRQLPVGLRK 242
Query: 340 ASMEAGYVGHHDLTLHPG--QVN-HGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
ME GY+ ++ G QV+ + +++ N ++GSSRQF GF+T ++
Sbjct: 243 V-MEFGYL----ISKFGGVRQVDAETEKYGVALVFEPTESQNFLIGSSRQFVGFDTRIDL 297
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
++ + +RA FYPK+ D + + GLRP+ D P+I V + F+A G
Sbjct: 298 NVVRCMARRALRFYPKIADFAMI------RTYCGLRPWTEDHLPIISRVEEVPGFFIAAG 351
Query: 457 HEGLGLSLALGTAELVADM--------VLTNPLKVD 484
HEG G+SLA T +L++++ + T PL+ D
Sbjct: 352 HEGDGISLAAVTGKLMSELLQEQTDTIIPTEPLRYD 387
>gi|452958020|gb|EME63376.1| FAD-dependent oxidoreductase [Amycolatopsis decaplanina DSM 44594]
Length = 390
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 184/395 (46%), Gaps = 37/395 (9%)
Query: 84 VIIIGAGIIGLTIARQL-LVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
V+++GAGI+G AR+L L G D V VVD+ P G T G+G I + + PG+E+ +L
Sbjct: 6 VVVLGAGIVGAACARELSLAGFD--VVVVDRGRPAGGTTSHGEGNILVSDKGPGAEL-EL 62
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
A S LW + + D+ I + G +++ T + L + G+RA
Sbjct: 63 AKLSTGLWPQVVADIADEDARAASGIEYDPKGGIVVATTDDGARALTAFAA--SQTGVRA 120
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYH 261
E LS +L AEP L + AAF P D+Q+ A + S R+
Sbjct: 121 EPLSHRELADAEPALT--REVTAAFHYPEDAQVQPAGAALALLG------SALRHGARLR 172
Query: 262 DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
+ + G + V+ + +V AAG W+G + + I V+P
Sbjct: 173 SDTEVVGATVHNGHITGVRVPGEVI-GADLVVNAAGPWAGQV------SARLGAPIAVRP 225
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVL 381
R+G +LV + + H +A YVG + G++ + ++ +T G +++
Sbjct: 226 RRGEVLVTTPMPCV-IRHKVYDADYVGAV-------GADSGELQTSAVVEST-WGGTVLI 276
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
GSSR+ F+ + ++ I +A +P L D+ + + G RPY+ D PV
Sbjct: 277 GSSRRRVDFDDTIRPDVLSAIAVKALRLFPALADVAVM------RAYGGFRPYVDDHLPV 330
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
+G P L ++ ATGHEG G+ L++GTA L+ +++
Sbjct: 331 LGEDPRLGNLWHATGHEGAGIGLSVGTARLLRELL 365
>gi|375099685|ref|ZP_09745948.1| glycine/D-amino acid oxidase, deaminating [Saccharomonospora cyanea
NA-134]
gi|374660417|gb|EHR60295.1| glycine/D-amino acid oxidase, deaminating [Saccharomonospora cyanea
NA-134]
Length = 396
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 177/391 (45%), Gaps = 47/391 (12%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
LSV VVD+ P SG + +G+G + + + G E+ +LA S +W RD +
Sbjct: 32 LSVTVVDRAGPASGTSSSGEGNVLISDKELGPEL-ELARYSLGVW-------RDDLAEFA 83
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+ ++ G +++ L L+ V E G+ E L L +AEPE+ A
Sbjct: 84 HLWEFEPKGGVIVASRESSLASLERLVASQREHGITVERLDGDALREAEPEVTP-HALGA 142
Query: 226 AFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT 285
A+ P D Q+ ML A++ + R ++ VT L+R + G V V+T+
Sbjct: 143 AYYPDDCQVQPMLVAAHLVRLAREHGAR----LVTKATVTGLVRRD--GRVCGVRTTAGD 196
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
L A+V AAG W+ + + +PV+PR+G +LV E + H A
Sbjct: 197 L-GCGAVVNAAGPWAAEIA------ALAGVRVPVEPRRGFVLVTEPLPP-TVRHKVYAAE 248
Query: 346 YV---GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRI 402
YV G D L V G G +++GS+R+ GF+ + +
Sbjct: 249 YVDNVGSSDAGLQASAVVEGTP-----------GGTVLIGSTRERVGFDRTPSADALRTL 297
Query: 403 WKRAAEFYPKLRDLCLADFISNRKVRI--GLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
+ A +P L ++ R +R G RPY PD PVIGP P ++ A GHEG
Sbjct: 298 ARNAVALFPFLAEV--------RALRHYHGFRPYSPDHLPVIGPDPRAPGLWHACGHEGA 349
Query: 461 GLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
G+ L++GT +L+A + P ++D PFA Q
Sbjct: 350 GVGLSVGTGKLLAQALTGKPTELDLEPFAPQ 380
>gi|398813005|ref|ZP_10571710.1| glycine/D-amino acid oxidase, deaminating [Brevibacillus sp. BC25]
gi|398039787|gb|EJL32913.1| glycine/D-amino acid oxidase, deaminating [Brevibacillus sp. BC25]
Length = 397
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 188/396 (47%), Gaps = 55/396 (13%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L V V++K SG + G I + + PG + ++L+S +ML D L L+
Sbjct: 30 LDVVVLEKGELASGTSSRCDGNILAIDKDPGFD-SQMSLKS----QMLVDQL---SLELD 81
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGE 221
Q ++ GS+L+ + E+ E V++ E GL L +D+ Q P +L+ G
Sbjct: 82 QTFEYRAPGSILVCESEAEMEAAHEWVRRQKEVGLPFRMLDRADIRQESPYFADDLLGGL 141
Query: 222 D--SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAV 279
+ + + PY ML A E +H A R E V L R +TG +
Sbjct: 142 ECATDSTVNPY------MLTFALFEGAKKHGARIMRRTE-----VKSLRRDQATGTFH-I 189
Query: 280 QTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNH 339
++ +K+ +V AAG W+ + + +DIP+ PRKGHL+V + +
Sbjct: 190 GLGTGSMTAKQ-VVNAAGVWAPVI------GKMVGVDIPIVPRKGHLIVASRQMPVGVRK 242
Query: 340 ASMEAGYVGHHDLTLHPG--QVNH-GQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
ME GY+ ++ G QV+ + +++ N ++GSSRQF GF+T ++
Sbjct: 243 V-MEFGYL----ISKFGGVRQVDEETEKYGVALVFEPTESQNFLIGSSRQFVGFDTRIDL 297
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
++ + +RA FYPK+ D + + GLRP+ D P+I V + F+A G
Sbjct: 298 NVVRCMARRALRFYPKIADFAII------RTYCGLRPWTEDHLPIISRVEEVPGYFIAAG 351
Query: 457 HEGLGLSLALGTAELVADMVL--------TNPLKVD 484
HEG G+SLA T +LV++M++ T PL+++
Sbjct: 352 HEGDGISLAAVTGKLVSEMLVDQTDTIIPTEPLRLE 387
>gi|433546251|ref|ZP_20502583.1| oxidoreductase [Brevibacillus agri BAB-2500]
gi|432182462|gb|ELK40031.1| oxidoreductase [Brevibacillus agri BAB-2500]
Length = 397
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 185/396 (46%), Gaps = 55/396 (13%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L V V++K SG + G I + + PG + ++L+S L L L
Sbjct: 30 LDVVVLEKGELASGTSSRCDGNILAIDKDPGFD-SQMSLQSQMLVAQLTRELE------- 81
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGE 221
++ GS+L+ + E+ E V++ EAGL L +D+ Q P +L+ G
Sbjct: 82 HSFEYRALGSILVCESEAEMEAANEWVRRQKEAGLPFRMLDRADIRQESPYFADDLLGGL 141
Query: 222 D--SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAV 279
+ + + PY ML A + +H A R E V L R +TG + +
Sbjct: 142 ECATDSTVNPY------MLTFALFDGAKKHGAKIMRRTE-----VKALRRDEATGAFQ-L 189
Query: 280 QTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNH 339
+ S ++ +++ +V AAG W+ + + +DIP+ PRKGHLLV + L
Sbjct: 190 ELSTGSMTARQ-VVNAAGVWAPVIGQ------MVGVDIPIVPRKGHLLVASRQLPVGLRK 242
Query: 340 ASMEAGYVGHHDLTLHPG--QVN-HGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
ME GY+ ++ G QV+ + +++ N ++GSSRQF GF+T ++
Sbjct: 243 V-MEFGYL----ISKFGGVRQVDAETEKYGVALVFEPTESQNFLIGSSRQFVGFDTRIDL 297
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
++ + +RA FYPK+ D L + GLRP+ D P+I V + F+A G
Sbjct: 298 NVVRCMARRALRFYPKIADFALI------RTYCGLRPWTEDHLPIISRVEEVPGFFIAAG 351
Query: 457 HEGLGLSLALGTAELVADM--------VLTNPLKVD 484
HEG G+SLA T +L++++ + T PL+ D
Sbjct: 352 HEGDGISLAAVTGKLMSELLQEQTDTIIPTEPLRYD 387
>gi|107026573|ref|YP_624084.1| FAD dependent oxidoreductase [Burkholderia cenocepacia AU 1054]
gi|116692237|ref|YP_837770.1| FAD dependent oxidoreductase [Burkholderia cenocepacia HI2424]
gi|105895947|gb|ABF79111.1| FAD dependent oxidoreductase [Burkholderia cenocepacia AU 1054]
gi|116650237|gb|ABK10877.1| FAD dependent oxidoreductase [Burkholderia cenocepacia HI2424]
Length = 375
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 182/407 (44%), Gaps = 55/407 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V VVD GATGAG G+ +V + L
Sbjct: 7 DVVVIGAGIVGAACAHEL-AQRGLRVLVVDDA--SGGATGAGMGH--LVAMDDNAAELAL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S LW+ L+ + + ++ G+L + E+ + + + L G+
Sbjct: 62 SHYSIDLWRALSGEMPEG-------CAYRNCGTLWLAADAHEMDLARAKQATLAAHGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E + ++ L Q EP L G A +P D+ L A + ++
Sbjct: 115 ELIDAAALAQLEPMLRAGLGG-ALKIPGDAILYAPVTANWL---------------LQRA 158
Query: 263 PVTCLLRSNSTG-EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
P L R + + +V + + + ++VA G + +L+ +L P++P
Sbjct: 159 PRITLRRERAVAVDGSSVTLASGDVLRAQRVLVANGVAARTLLPEL----------PLRP 208
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVL 381
+KGHLL+ + + ++H +E GY + S++ G L++
Sbjct: 209 KKGHLLITDRYPG-HVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLLI 258
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
GSSRQF + +VE ++ R+ +RA + P L DL + + G R PDG P+
Sbjct: 259 GSSRQFDTEDAQVEPPVLARMLRRAVGYLPDLADL------NGIRAWTGFRSASPDGLPL 312
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+G P V+LA GHEGLG++ A G+A LVA ++ +D P+
Sbjct: 313 LGEHPARPGVWLAVGHEGLGVTTAPGSARLVAALMAGERPPIDIEPY 359
>gi|152985521|ref|YP_001349477.1| hypothetical protein PSPA7_4123 [Pseudomonas aeruginosa PA7]
gi|150960679|gb|ABR82704.1| hypothetical protein PSPA7_4123 [Pseudomonas aeruginosa PA7]
Length = 371
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 187/415 (45%), Gaps = 64/415 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCS--GATGAGQGYIWMVHRTPGSEIW 140
+ I++GAGI+G A +L L V VVD C GAT AG G++ + P
Sbjct: 4 EAIVVGAGIVGAACAEEL-ARRGLDVLVVD----CQRGGATAAGMGHLVAMDDNPA---- 54
Query: 141 DLALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA 198
+LAL + + W+ A + + ++ G+L + EL + + + L A
Sbjct: 55 ELALSGHSIQAWRAWAAEMPED-------CAYRGCGTLWLAADGAELAEAERKRQALLAA 107
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE 258
G+ E L ++ L EP L G + A +P D L A A ++ G
Sbjct: 108 GVACEMLDAARLQAVEPALRPGL-AGALKVPGDGILYAPNAARWL------LERAGPRLR 160
Query: 259 FYHDPVTCLLRSNSTGEVEA--VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
H V+ EV+ ++ + S +A+V+A G +G E+ +
Sbjct: 161 RLHAEVS---------EVDGSRLRLADGRWLSAEALVLANGIHAG----------ELCAE 201
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
+P++P+KGHLL+ + + L H +E GYV + S++ A
Sbjct: 202 LPIRPKKGHLLITDRYPG-SLRHQLVELGYVS---------SAHASSGTSVAFNAQPRPT 251
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
G + LGSSRQF + +VE ++ R+ +RA ++ P L L + + G R P
Sbjct: 252 GQVFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGL------NAIRAWTGFRAATP 305
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
DG P++G P ++LA GHEGLG++ A G+A L+A + + +D AP+ Q
Sbjct: 306 DGLPLLGEHPAQPGLWLAVGHEGLGVTTAPGSARLLAAQLCGDAPPLDPAPYLPQ 360
>gi|398861267|ref|ZP_10616902.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM79]
gi|398233536|gb|EJN19460.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM79]
Length = 371
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 181/411 (44%), Gaps = 58/411 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A Q L L V V+D + GAT AG G++ ++ P +L
Sbjct: 8 DVIVIGAGIIGAACA-QALARRGLQVLVLDAGL--HGATAAGMGHLLVLDDNPA----EL 60
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL L W+ LA L D ++ G+L + EE+ + + L G+
Sbjct: 61 ALSQYSLQRWRELAPDLPDG-------CAYRNNGTLWLAANAEEMAVAHGKYLNLQTQGV 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E +S+S L Q EPEL G + + D L A ++ + R +
Sbjct: 114 ACELISASALRQREPELREGLEG-GLLINGDGILYAPATANWMLDTPNIRQRRARVSAVD 172
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
+ V CL S +A+V+A G ++ E+ ++P++
Sbjct: 173 GNRV-CL--------------DDGRWLSAEAVVLANG----------IQANELCPELPIE 207
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + + H +E GYV P S + G L
Sbjct: 208 PKKGHLLITDRYPR-TVTHTLVELGYVTSAHNATGP---------STACNIQPRPTGQLF 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+G+SRQF + +VE ++ ++ KRAAE+ P L L + + G R PDG P
Sbjct: 258 IGASRQFGTTDPQVEGWMLAKMLKRAAEYMPGLARL------NGIRAWTGFRAASPDGLP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
++G P ++LA GHEGLG++ A TA+L+ + + + P+ Q
Sbjct: 312 LVGQHPQRQGLWLAVGHEGLGVTTAPATADLLVAQLFDETPPLPAHPYLPQ 362
>gi|398905518|ref|ZP_10652898.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM50]
gi|398174298|gb|EJM62097.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM50]
Length = 371
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 181/411 (44%), Gaps = 58/411 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A Q L L V V+D + GAT AG G++ ++ P +L
Sbjct: 8 DVIVIGAGIIGAACA-QALARRGLQVLVLDAGL--HGATAAGMGHLLVLDDNPA----EL 60
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL L W+ LA L D ++ G+L + EE+ + + L G+
Sbjct: 61 ALSQYSLQRWRELAPDLPDG-------CAYRNNGTLWLAANAEEMAVAHGKYLNLQAQGV 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E +S+S L Q EPEL G + + D L A ++ + R +
Sbjct: 114 ACELISASALRQREPELREGLEG-GLLINGDGILYAPATANWMLDTPNIRQRRARVSAVD 172
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
+ V CL S +A+V+A G ++ E+ ++P++
Sbjct: 173 GNRV-CL--------------DDGHWLSAEAVVLANG----------IQANELCPELPIE 207
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + + H +E GYV P S + G L
Sbjct: 208 PKKGHLLITDRYPR-TVTHTLVELGYVTSAHNATGP---------STACNIQPRPTGQLF 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+G+SRQF + +VE ++ ++ KRAAE+ P L L + + G R PDG P
Sbjct: 258 IGASRQFGTTDPQVEGWMLAKMLKRAAEYMPGLARL------NGIRAWTGFRAASPDGLP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
++G P ++LA GHEGLG++ A TA+L+ + + + P+ Q
Sbjct: 312 LVGQHPQRQGLWLAVGHEGLGVTTAPATADLLVAQLFDETPPLAAQPYLPQ 362
>gi|224369994|ref|YP_002604158.1| protein SoxB2 [Desulfobacterium autotrophicum HRM2]
gi|223692711|gb|ACN15994.1| SoxB2 [Desulfobacterium autotrophicum HRM2]
Length = 390
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 179/379 (47%), Gaps = 39/379 (10%)
Query: 101 LVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160
L D V +++K SG++GA G ++M + PG + LA+ S K + L L
Sbjct: 24 LAKYDAPVTLIEKNDLASGSSGACDGLVFMQSKKPGIHLT-LAMESLKRFATLQQEL--- 79
Query: 161 GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVG 220
P+ I K TG L+I T E +++ K+ GL L S L EP L G
Sbjct: 80 ---PVD-IELKHTGGLVIIETEAEYRAMEKYTKEQQANGLDVRLLDPSQALAKEPLLAPG 135
Query: 221 EDSRAAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAV 279
+ F P D+Q++ + L + + ++ A +A+ L V V
Sbjct: 136 IIG-STFSPLDAQVNPINLTLGFALAAKKNHARIVTHAD-------VLGIQTHDNRVTGV 187
Query: 280 QTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNH 339
+T++ + +V AAG +G L+ D+ + + +PV+PR+G ++V + + L H
Sbjct: 188 RTTQGN-FDADIVVNAAGSMAG-LVSDM-----VGISMPVRPRRGQIVVTHAAHPV-LKH 239
Query: 340 ASMEAGYVG-HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTI 398
+ A Y+ +D +L H ISM + GNL+LGS+R+F GFN +
Sbjct: 240 CLISAKYIAAKYDPSL-----AHTAGQGISMEQADN--GNLLLGSTREFVGFNKTNTLSG 292
Query: 399 IDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHE 458
I +I + A P ++ + + GLRPY PDG P++G V L F+A GHE
Sbjct: 293 IKKIIHQTAAILPVIKTFQVI------RTFAGLRPYTPDGLPILGSVRSLDGFFMAAGHE 346
Query: 459 GLGLSLALGTAELVADMVL 477
G G++L+ T L+A M+L
Sbjct: 347 GDGIALSPVTGHLLAQMLL 365
>gi|403529649|ref|YP_006664388.1| bifunctional thiamine biosynthesis oxidoreductase/thiazole synthase
[Arthrobacter sp. Rue61a]
gi|403231929|gb|AFR31350.1| thiO/thiG: bifunctional protein thiO/thiG [Arthrobacter sp. Rue61a]
Length = 384
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 190/411 (46%), Gaps = 46/411 (11%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAG+IG A + LSV V+++ SG + A +G I + + G E+ DL
Sbjct: 7 DVIVIGAGVIGAATA-YFATQAGLSVIVLERGTIASGTSSACEGNILVSDKEAGPEL-DL 64
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
AL + ++W+ L + G + ++ G L++ L E ++G+
Sbjct: 65 ALYAQQVWR---KDLGEHG----HLWEFENKGGLVVAAKASSAASLLELTISQRQSGIEV 117
Query: 203 EYLSSSDLLQAEPELMVGED-SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYH 261
+ + L EP + ED A+ P D+Q+ ML V ++ + R ++G
Sbjct: 118 TDVPADRLRDYEPH--IAEDLVSGAYYPQDAQVQPMLVVGHLLRLAR---AQGAVVHTGT 172
Query: 262 DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
+ VT LR + V V TS ++S A+V AAG W+G++ + +++PVKP
Sbjct: 173 E-VTGFLRDGRS--VNGV-TSNRGIFSASAVVNAAGTWAGNVA------SLAGVNVPVKP 222
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGH---HDLTLHPGQVNHGQILSISMTATTDVIGN 378
R+G +LV E L ++H A YV + D L V G G
Sbjct: 223 RRGFVLVTEPL-PLTIHHKVYAAEYVANVASSDADLQTSPVVEGT-----------QAGT 270
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+++G+SR+ GF++ + R+ ++A +P LA + R G RPY PD
Sbjct: 271 VLIGASRERVGFDSSPSLPALGRLAEQAIRLFP-----VLAQAKAIRHYH-GFRPYCPDH 324
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
PVIG ++ A GHEG G+ L TA+L+ + +D +PFA
Sbjct: 325 LPVIGADDSAPGLWHAAGHEGAGIGLGPATAKLLVQNITGESTDLDLSPFA 375
>gi|159468560|ref|XP_001692442.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278155|gb|EDP03920.1| predicted protein [Chlamydomonas reinhardtii]
Length = 393
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 91/157 (57%), Gaps = 9/157 (5%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T DV+I+GAGI+GL A LL + LSVA++++ C+GATGAGQGY+WM HR PGS W
Sbjct: 53 TADVVIVGAGIVGLFAAADLLK-AGLSVALLERQGLCAGATGAGQGYLWMAHRNPGSVGW 111
Query: 141 DLALRSNKLWKMLADSLRDQGLDPL--QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA 198
LA RS LW+ L + DP + W+ GSLL+ +P E L ER L E
Sbjct: 112 ALAARSVALWQRLVAA------DPAFRAAVEWQDCGSLLVATSPAEAAALSERQMHLNEV 165
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLD 235
G+RA Y+ L AEP L + A + D+Q++
Sbjct: 166 GVRASYMDGRRLADAEPGLALPHGGAALLVQADTQIN 202
>gi|294667544|ref|ZP_06732759.1| D-amino acid oxidase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|292602664|gb|EFF46100.1| D-amino acid oxidase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 423
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 183/412 (44%), Gaps = 53/412 (12%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR 133
+A+ ++D+I+IGAGI+G A L VA+V+ G+T A G++ +
Sbjct: 49 SAAGTRRSYDLIVIGAGIVGAACAEAAAG-EGLRVAIVEPGPIGGGSTAAAMGHLVAMDD 107
Query: 134 TPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
P L+ S +LW+ A L + + G+L + R EL + ++
Sbjct: 108 DPAE--LALSAYSLRLWERFAT---------LSEAEFSRCGTLWVARDARELAAVPAKIA 156
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+L AGL E + ++ L EP+L+ G + +P + AV Y + RH
Sbjct: 157 RLATAGLHVEAIDAAQLYALEPQLVPGL-AGGMRVPDE-------AVVYPPRVARHLVGA 208
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
T R + V +Q L + + SG + LL E
Sbjct: 209 A---------CTSGARLFAGRRVVQLQEHAVRLDDGQTLAGPVLVASGVALPQLLPE--- 256
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QILSISMTAT 372
+ ++PRKGHL++ + L + H +E GY HG S++
Sbjct: 257 ---LALRPRKGHLVITDRHPGL-IRHQLLELGYA----------DSAHGADDTSVAFNVQ 302
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G +++GSSRQF + + ++ ++ +RA + P LR+L +V GLR
Sbjct: 303 PRPTGQILIGSSRQFGEHDRALSMPVLQQMLQRAFAYLPVLREL------QAIRVWTGLR 356
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVD 484
P PDG+P +G VPG V++A GHEGLG++ ALG+A ++ D +L +D
Sbjct: 357 PATPDGRPYLGMVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAID 408
>gi|399000013|ref|ZP_10702745.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM18]
gi|398130607|gb|EJM19942.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM18]
Length = 371
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 180/411 (43%), Gaps = 58/411 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A Q L L V V+D + GAT AG G++ ++ P +L
Sbjct: 8 DVIVIGAGIIGAACA-QALARRGLQVLVLDAGL--HGATAAGMGHLLVLDDNPA----EL 60
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL L W+ LA L D ++ G+L + EE+ + + L G+
Sbjct: 61 ALSQYSLQRWRELAPDLPDG-------CAYRNNGTLWLAANAEEMAVAHSKYLNLKAQGV 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E +S+S L Q EPEL + + D L A ++ + R +
Sbjct: 114 ACELVSASALRQREPELRADLEG-GLLINGDGILYAPATARWMLDTPNIRQHRARVSAVD 172
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
V CL +A+V+A G ++ +E+ ++P++
Sbjct: 173 GHRV-CL--------------DDGQWLRAEAVVLANG----------IQASELCPELPIE 207
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + + H +E GYV P S + G L
Sbjct: 208 PKKGHLLITDRYPG-TVTHTLVELGYVTSAHNATGP---------STACNIQPRPTGQLF 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+G+SRQF + +VE ++ ++ KRAAE+ P L L + + G R PDG P
Sbjct: 258 IGASRQFGTTDPQVEGWMLAKMLKRAAEYMPGLARL------NGIRAWTGFRAASPDGLP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
++G P ++LA GHEGLG++ A GTA+L+ + + + P+ Q
Sbjct: 312 LVGQHPQHQGLWLAVGHEGLGVTTAPGTADLLVAQLFNETPPLAAQPYLPQ 362
>gi|381170925|ref|ZP_09880077.1| FAD dependent oxidoreductase family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380688648|emb|CCG36564.1| FAD dependent oxidoreductase family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 402
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 185/419 (44%), Gaps = 67/419 (15%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR 133
+A+ ++D+I+IGAGI+G A L VA+V+ G+T A G++ +
Sbjct: 28 SAAGTRRSYDLIVIGAGIVGAACAEAAAG-EGLRVAIVEPGPIGGGSTAAAMGHLVAMDD 86
Query: 134 TPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
P L+ S +LW+ A L + + G+L + EL + ++
Sbjct: 87 DPAE--LALSAYSLRLWERFAT---------LSEAEFSRCGTLWVACDARELAAVPAKIA 135
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVG-------EDSRAAFLPYDSQLDAMLAVAYIEKG 246
+L AGL AE + ++ L EP+L+ G D + P ++ L A G
Sbjct: 136 RLATAGLHAEAIDAAQLYALEPQLVPGLAGGMRVPDEAVVYPP---RVARHLVGAACTSG 192
Query: 247 NRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHD 306
R FA + R + + AV+ + +V SG +
Sbjct: 193 ARLFAGR-RVVQL---------------QEHAVRLDDGQTLAGPVLVA-----SGVALPQ 231
Query: 307 LLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QIL 365
LL E + ++PRKGHL++ + L + H +E GY HG
Sbjct: 232 LLPE------LALRPRKGHLVITDRHPGL-IRHQLLELGYA----------DSAHGADDT 274
Query: 366 SISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNR 425
S++ G +++GSSRQF + + ++ ++ +RA + P LR+L
Sbjct: 275 SVAFNVQPRPTGQILIGSSRQFGEHDRALSMPVLQQMLQRAFAYLPVLREL------QAI 328
Query: 426 KVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVD 484
+V GLRP PDG+P +G VPG V++A GHEGLG++ ALG+A ++ D +L +D
Sbjct: 329 RVWTGLRPATPDGRPYLGKVPGRRDVWVAAGHEGLGITTALGSARVIVDSLLGRTPAID 387
>gi|256378742|ref|YP_003102402.1| FAD dependent oxidoreductase [Actinosynnema mirum DSM 43827]
gi|255923045|gb|ACU38556.1| FAD dependent oxidoreductase [Actinosynnema mirum DSM 43827]
Length = 389
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 184/395 (46%), Gaps = 36/395 (9%)
Query: 86 IIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALR 145
++GAGI+G IAR L +V VVD+ G + G+G + + + PG E+ LA R
Sbjct: 1 MVGAGIVGSAIARAL-AREGCAVTVVDRGPSAGGTSAGGEGNLLVSDKEPGPELR-LAQR 58
Query: 146 SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYL 205
S W + D LRD+ + ++ G L++ T L+E AG+ AE +
Sbjct: 59 SLSSWLRIEDELRDELPAAFPDLELERKGGLVVATTDAGAAALREFAAAQRAAGVTAEAV 118
Query: 206 SSSDLLQAEPELMVGEDSRAAFL--PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDP 263
+ + EP+L RAA + P D Q+ + A + R ++ R P
Sbjct: 119 DDDRVRELEPDLT---PDRAAVVHYPDDMQVQPVAATEALLAAARRHGAQVRQGVEVTGP 175
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
V R + V T+ + A+V+AAG WSG++ L +PV PR+
Sbjct: 176 VLDGPR------LVGVTTTTGQTLTADAVVLAAGPWSGAVAERLGAH------LPVAPRR 223
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGNLVLG 382
G +LV ++ H +A YVG V G L +S + G +++G
Sbjct: 224 GTVLVTSRMPQ-RVWHKVYDADYVG---------AVGSGAADLQVSSVVESTAAGTVLIG 273
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSR+ GF+ +E ++ + +A +P L D+ + + G RP++PD PVI
Sbjct: 274 SSRERRGFDERIEARVLSALAAKALLLFPFLADVQVM------RAYGGFRPFVPDHLPVI 327
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
GP L ++ ATGHEG G+ L+L TAE++ D +L
Sbjct: 328 GPDHRLPGLWHATGHEGAGIGLSLATAEILRDDLL 362
>gi|148271986|ref|YP_001221547.1| putative secreted D-amino acid oxidase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829916|emb|CAN00841.1| putative secreted D-amino acid oxidase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 414
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 178/391 (45%), Gaps = 31/391 (7%)
Query: 101 LVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160
L + + V VV++ SG + G+G I + + PG+E+ +LA + + W +A L D+
Sbjct: 21 LARAGIRVTVVERAAVASGTSAQGEGNILVSDKGPGAEL-ELAQLAARRWPEVAAELADE 79
Query: 161 GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVG 220
D L I ++ G L++ T E L AG+ A + L+ EP L
Sbjct: 80 LGDALPSIEYEPKGGLVVTTTDEGADPLLAFAATQRSAGVDAVPVDRRRALELEPWLNPA 139
Query: 221 EDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQ 280
+ A P D+Q+ +A + R + R P+ ++ G + V+
Sbjct: 140 ITA-AVHYPEDAQVQPAIATEALAASARRAGAVVRTGVEVIGPLL-----DADGALRGVR 193
Query: 281 TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHA 340
TS + + +++AAG WSG + L + +PV PR+G +LV ++ H
Sbjct: 194 TSAGDIAADD-VLIAAGPWSGEVARTL------GVQLPVLPRRGVVLVTTRMPH-RIRHK 245
Query: 341 SMEAGYVGHHDLTLHPGQVNHGQ-ILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTII 399
+ YVG V G L S + G +++GSSR+ GF+ + ++
Sbjct: 246 VYDGDYVG---------AVGSGDGALQTSGVVESTPSGTVLIGSSRERVGFDASLRVAVL 296
Query: 400 DRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEG 459
+ + +A +P L + + + G RPY+PD PV+GP P L ++ A+GHEG
Sbjct: 297 EELAAKAVRLFPFLVE------ANAMRSYGGFRPYLPDHLPVVGPDPRLPGLWHASGHEG 350
Query: 460 LGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
G+ L++ TA+L+ + +D PF+V
Sbjct: 351 AGIGLSIATADLIVAQMTGEATPLDVRPFSV 381
>gi|404402296|ref|ZP_10993880.1| FAD-dependent oxidoreductase [Pseudomonas fuscovaginae UPB0736]
Length = 371
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 181/409 (44%), Gaps = 54/409 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI+IGAGI+G A Q L L V V+D +P AT AG G++ ++ P +L
Sbjct: 8 NVIVIGAGIVGAACA-QALARRGLDVLVLDAGLP--NATAAGMGHLLVLDDNPA----EL 60
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
AL + + R+ D + ++ G+L I PEE+ + + + L G+
Sbjct: 61 ALSQYSVQRW-----REHAPDLPEHCAYRSNGTLWIAANPEEMAVAESKYHNLQAHGIAC 115
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E L+ + L + EP L G + + D L A ++ + + R +E
Sbjct: 116 ERLNGTALHEREPHLREGLEG-GLLIQGDGILYAPATARWMLETPGIRQRRARVSEI--- 171
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
+ ++ + A+V+A G ++ E+ ++P++P+
Sbjct: 172 ------------DGNRIRLDNGDWLAADAVVLANG----------VQADELCPELPIEPK 209
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHLL+ + + ++ H +E GYV P S + G L +G
Sbjct: 210 KGHLLITDRYPG-RVTHTLVELGYVTSAHNATGP---------STACNIQPRTTGQLFIG 259
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
+SRQF + VE ++ ++ KRA E+ P L L + + GLR PDG P++
Sbjct: 260 ASRQFGTRDLTVESWMLAKMLKRAVEYLPGLAHL------NAIRAWTGLRAASPDGLPLV 313
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
G P ++LA GHEGLG++ A GTA+L+ + + + P+ Q
Sbjct: 314 GEHPQRQGLWLAVGHEGLGVTTAPGTADLLVAQLFNETPPLAATPYLPQ 362
>gi|384428347|ref|YP_005637706.1| D-amino acid oxidase [Xanthomonas campestris pv. raphani 756C]
gi|341937449|gb|AEL07588.1| D-amino acid oxidase [Xanthomonas campestris pv. raphani 756C]
Length = 409
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 198/426 (46%), Gaps = 61/426 (14%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR 133
TA+S ++D+I++GAGI+G A L VA+V+ G+T A G++ +
Sbjct: 35 TAASTRRSYDLIVVGAGIVGAACAEAAAA-EGLRVAIVEPGPIGGGSTAAAMGHLVAMDD 93
Query: 134 TPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
P L+ S +LW+ A+ L + + G+L + R EL + ++
Sbjct: 94 DPAE--LALSAYSLRLWERFAE---------LSEAEFSRCGTLWVARDARELAAVPAKIA 142
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+L AGLRAE + ++ L EP L+ G + +P + AV Y + RH S
Sbjct: 143 RLAAAGLRAEAIDATQLYALEPHLVPGL-AGGMRVPDE-------AVVYPPRVARHLVS- 193
Query: 254 GRYAEFYHDPVTCLLRSN--STGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET 311
+ C ++ + +VE +Q L + + SG +
Sbjct: 194 ----------LACTAGAHLFAGRKVEQLQAGGARLDDGQVLAGPVLVASG------VALP 237
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QILSISMT 370
++ ++ ++PRKGHL++ + L + H +E GY HG S++
Sbjct: 238 ALLPELALRPRKGHLVITDRHPGL-IRHQLLELGYA----------DSAHGADDSSVAFN 286
Query: 371 ATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIG 430
G +++GSSRQ+ + + I+ ++ +RA + P LR+L +V G
Sbjct: 287 VQPRPTGQILIGSSRQYGAADRTLSMPILQQMLQRAFAYLPVLREL------QAIRVWTG 340
Query: 431 LRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF-- 488
LRP DG+P +GPVPG V++A GHEGLG++ ALG+A ++ D +L +D AP+
Sbjct: 341 LRPATADGRPYLGPVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAIDPAPYAP 400
Query: 489 --AVQG 492
AVQG
Sbjct: 401 ARAVQG 406
>gi|239818177|ref|YP_002947087.1| FAD dependent oxidoreductase [Variovorax paradoxus S110]
gi|239804754|gb|ACS21821.1| FAD dependent oxidoreductase [Variovorax paradoxus S110]
Length = 368
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 193/412 (46%), Gaps = 55/412 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I+IGAGI+G A L V V+D V GATGAG G++ ++ P +L
Sbjct: 4 DAIVIGAGIVGAACAHALAQAGR-RVLVLDARV--GGATGAGMGHLVVMDDNPA----EL 56
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S+ W+ LA + + + G+L I EE+ + + ++L E G+
Sbjct: 57 ALSSHSTAQWRALAPRMSED-------CAYSACGTLWIAANEEEMAEAERKQQRLHEHGI 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
+ L + +L +AEP L G + A +P D L A A ++ A
Sbjct: 110 ESRLLGALELARAEPALRKGL-AGALEVPGDGILYAPNAARWL------LAQGADSIRIE 162
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H V + + ++ + + S +V+A G + T + ++P++
Sbjct: 163 HAKVDAIEDDGT------LRLADGSRRSAPQVVLANG----------IEATVLCPELPIR 206
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + ++H +E GYV +H S++ G L+
Sbjct: 207 PKKGHLLITDRYPG-TVHHQLVELGYVT---------SAHHSDGDSVAFNVQPRPTGQLL 256
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF + VE ++ R+ +RA + P L A+F + R GLR PDG P
Sbjct: 257 IGSSRQFDTTDPAVEAPMLARMLQRAIGYLPGL-----AEFNAVRSW-TGLRAATPDGLP 310
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQG 492
++G P K++LA GHEGLG++ A G+A L+A ++ D+AP+A +G
Sbjct: 311 LLGKHPWREKLWLAVGHEGLGVTTAPGSAHLLAALMTGAAPGFDAAPYAPRG 362
>gi|325925079|ref|ZP_08186499.1| glycine/D-amino acid oxidase, deaminating [Xanthomonas perforans
91-118]
gi|325544495|gb|EGD15858.1| glycine/D-amino acid oxidase, deaminating [Xanthomonas perforans
91-118]
Length = 386
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 191/419 (45%), Gaps = 61/419 (14%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
++D+I+IGAGI+G A L VA+V+ GAT A G++ + P
Sbjct: 19 SYDLIVIGAGIVGAACAEAAAG-EGLRVAIVEPGPIGGGATAAAMGHLVAMDDDPAE--L 75
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
L+ S +LW+ A +L D + + G+L + R EL + ++ +L AGL
Sbjct: 76 ALSAYSLRLWERFA-TLSDAE--------FSRCGTLWVARDARELAAVPAKIARLATAGL 126
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
AE + ++ L EP+L+ G + +P + AV Y + RH
Sbjct: 127 HAEAIDAAQLYALEPQLVPGL-AGGMRVPDE-------AVVYPPRVARHLVG-------- 170
Query: 261 HDPVTCL--LRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
V C R + V +Q L + + SG + LL E +
Sbjct: 171 ---VACTSGARLFAGRRVVQLQAHAVRLDDGQTLAGPVLVASGVALPQLLPE------LA 221
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QILSISMTATTDVIG 377
++PRKGHL++ + L + H +E GY HG S++ G
Sbjct: 222 LRPRKGHLVITDRHPGL-IRHQLLELGY----------ADSAHGADDTSVAFNVQPRPTG 270
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
+++GSSRQF + + ++ ++ +RA + P LR+L +V GLRP PD
Sbjct: 271 QILIGSSRQFGEHDRALSMPVLQQMLQRAFAYLPVLREL------QAIRVWTGLRPATPD 324
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF----AVQG 492
G+P +G VPG V++A GHEGLG++ ALG+A L+ D +L +D AP+ AVQG
Sbjct: 325 GRPYLGVVPGRRDVWVAAGHEGLGVTTALGSARLIVDSLLGRTPAIDPAPYAPARAVQG 383
>gi|325922813|ref|ZP_08184541.1| glycine/D-amino acid oxidase, deaminating [Xanthomonas gardneri
ATCC 19865]
gi|325546700|gb|EGD17826.1| glycine/D-amino acid oxidase, deaminating [Xanthomonas gardneri
ATCC 19865]
Length = 363
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 182/408 (44%), Gaps = 59/408 (14%)
Query: 86 IIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALR 145
+IGAGI+G A L VA+V+ G+T A G++ + P L+
Sbjct: 1 MIGAGIVGAACAEAAAG-EGLRVAIVEPGPIGGGSTAAAMGHLVAMDDDPAE--LALSAY 57
Query: 146 SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYL 205
S +LW+ A L + + G+L + R EL + ++ +L A L AE +
Sbjct: 58 SLRLWERFAQ---------LSEAEFSRCGTLWVARDARELAAVPAKIARLAAADLHAEAI 108
Query: 206 SSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS---KGRYAEFYHD 262
++ L EP+L+ G + +P + AV Y + RH S K F
Sbjct: 109 DATQLYALEPQLVPGL-AGGMRVPGE-------AVVYPPRVARHLVSLACKAGAQLFAGR 160
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
V LL V+ L + +V SG + LL E + ++PR
Sbjct: 161 KVEQLL-------AHGVRLDDGQLLAGPVLVA-----SGVALPQLLPE------LALRPR 202
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QILSISMTATTDVIGNLVL 381
KGHL++ + + + H +E GY HG S++ G +++
Sbjct: 203 KGHLVITDRHPGV-IRHQLLELGYA----------DSAHGADDTSVAFNVQPRPTGQILI 251
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
GSSRQF + + ++ ++ +RA + P LR+L +V GLRP PDG+P
Sbjct: 252 GSSRQFGEHDRALSMPVLQQMLQRAFAYLPVLREL------QAIRVWTGLRPATPDGRPY 305
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
+G VPG V++A GHEGLG++ ALG+A ++ D +L +D AP+A
Sbjct: 306 LGAVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPVIDPAPYA 353
>gi|418472721|ref|ZP_13042430.1| secreted oxidoreductase [Streptomyces coelicoflavus ZG0656]
gi|371546664|gb|EHN75115.1| secreted oxidoreductase [Streptomyces coelicoflavus ZG0656]
Length = 398
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 171/377 (45%), Gaps = 36/377 (9%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L V VVD+ +G T G+G + + + PG E+ LA S LW ++ R+ G D L
Sbjct: 34 LDVTVVDRGPVGAGTTSRGEGNVLLSDKEPGPEL-ALAHLSRTLWD---EAGRELGPDSL 89
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
++ + G L++ T E L L E + AG+R E + L EP L G
Sbjct: 90 EL---EPKGGLVVASTAESLTALGEFAARQEAAGVRVEPVERVRDL--EPHLAPGIPGGI 144
Query: 226 AFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT 285
+ P D+Q+ +LA A + + ++ R E V+ + + G + V+T+
Sbjct: 145 HY-PQDAQVQPVLAAAALLRAAVRHGARFRTGE-----VSGAVTARDGGRITGVRTAAGD 198
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
+ A+V AAG W G + L E++ PR+G +LV E + + H A
Sbjct: 199 VLPADAVVNAAGTWGGEVGRRLGAPVEVL------PRRGFVLVTEPLPPM-IRHKVYSAD 251
Query: 346 YVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKR 405
YV + + L S G +++G+SR+ GF+T + ++ R+ +
Sbjct: 252 YVAN--------VASSDAGLETSCVVEGTRGGTILIGASRERVGFDTTMNTAVVARLAAQ 303
Query: 406 AAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLA 465
A +P LR + L R R G RPY PD PV+GP P + V A GHEG G+ LA
Sbjct: 304 ACRLFPFLRGVHLM-----RAYR-GFRPYCPDHLPVVGPDPRVPGVVHACGHEGAGIGLA 357
Query: 466 LGTAELVADMVLTNPLK 482
T LV +L P +
Sbjct: 358 PATGALVTAHLLGRPWR 374
>gi|237729208|ref|ZP_04559689.1| FAD dependent oxidoreductase [Citrobacter sp. 30_2]
gi|226908937|gb|EEH94855.1| FAD dependent oxidoreductase [Citrobacter sp. 30_2]
Length = 373
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 184/402 (45%), Gaps = 69/402 (17%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A QL V +VD +GAT AG G++ + P +L
Sbjct: 11 DVIVIGAGIIGAACAWQL-AARGQRVTLVDD--GNAGATAAGMGHLVCMDDDPA----EL 63
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL + L W+ L + + W+ G+L + TP+EL + +E+ +++ + +
Sbjct: 64 ALSAWSLESWRKLTPRMPES-------CAWRGCGTLWLAETPQELALAEEKKQRMAQYQV 116
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
+E + L EP L G + ++P D + Y R F + A+
Sbjct: 117 VSEMQTRDRLAAREPLLTAGL-AGGLWVPGDG-------IVYAPNVARWFIND---ADLT 165
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKK-----AIVVAAGCWSGSLMHDLLRETEIVL 315
H LR ++ +V TL+S K AIV+A+G G+ M LL E +
Sbjct: 166 H------LRDSAL----SVDAPYVTLHSGKRLRARAIVIASGL--GANM--LLDENWL-- 209
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+P+KG L + + + L L+H +E GY G H S++
Sbjct: 210 ----RPKKGQLAITDRYGPL-LSHQLVELGY----------GASAHAGGTSVAFNIQPRP 254
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G L++GSSRQF + EV+ ++ ++ RA F P L L + S G R
Sbjct: 255 TGQLLIGSSRQFDNTDREVDLPLLAQMLARARHFLPSLETLNIIRCWS------GFRAAS 308
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
DG P+IGP P ++LA GHEGLG++ A TAEL+ +L
Sbjct: 309 ADGNPLIGPHPARPGIWLALGHEGLGVTTAPATAELLCAQIL 350
>gi|78048303|ref|YP_364478.1| D-amino acid oxidase [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|78036733|emb|CAJ24426.1| putative D-amino acid oxidase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 425
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 190/419 (45%), Gaps = 61/419 (14%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
++D+I+IGAGI+G A L VA+V+ GAT A G++ + P
Sbjct: 58 SYDLIVIGAGIVGAACAEAAAG-EGLRVAIVEPGPIGGGATAAAMGHLVAMDDDPAE--L 114
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
L+ S +LW+ A +L D + + G+L + R EL + ++ +L AGL
Sbjct: 115 ALSAYSLRLWERFA-TLSDAE--------FSRCGTLWVARDARELAAVPAKIARLATAGL 165
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
AE + ++ L EPEL+ G + +P + AV Y + RH
Sbjct: 166 HAEAIDAAQLYALEPELVPGL-AGGMRVPDE-------AVVYPPRVARHLVG-------- 209
Query: 261 HDPVTCL--LRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
V C R + V +Q L + + SG + LL E +
Sbjct: 210 ---VACTSGARLFAGRRVVQLQAHAVRLDDGQTLAGPVLVASGVALPQLLPELAL----- 261
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QILSISMTATTDVIG 377
+PRKGHL++ + L + H +E GY HG S++ G
Sbjct: 262 -RPRKGHLVITDRHPGL-IRHQLLELGY----------ADSAHGADDTSVAFNVQPRPTG 309
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
+++GSSRQF + + ++ ++ +RA + P LR+L +V GLRP PD
Sbjct: 310 QILIGSSRQFGEHDRALSMPVLQQMLQRAFAYLPVLREL------QAIRVWTGLRPATPD 363
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF----AVQG 492
G+P +G VPG V++A GHEGLG++ ALG+A ++ D +L +D AP+ AVQG
Sbjct: 364 GRPYLGVVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAIDPAPYAPARAVQG 422
>gi|336248561|ref|YP_004592271.1| FAD-dependent oxidoreductase [Enterobacter aerogenes KCTC 2190]
gi|334734617|gb|AEG96992.1| FAD-dependent oxidoreductase [Enterobacter aerogenes KCTC 2190]
Length = 369
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 181/408 (44%), Gaps = 61/408 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A QL SV ++D P GAT AG G++ + P +L
Sbjct: 5 DVIVIGAGIIGAACAWQL-AKRGQSVTLIDDGQP--GATAAGMGHLVCMDDDPA----EL 57
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL + L W+ + + D W+ G+L + + EE+ ++ +++ +
Sbjct: 58 ALSAWSLERWRAITPRMPDN-------CAWRGCGTLWLAESEEEMAGAGDKQRRMAGHQV 110
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRYAEF 259
+E + + EP L G + ++P D + A +A I H
Sbjct: 111 HSELQTPQQIAGREPLLRDGL-AGGLWVPGDGIVYAPNVARWLITDAGNHL--------- 160
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
TCL S T + V + +AIVVA G L ++ + +
Sbjct: 161 -----TCLRDSVQTIDEPQVLLASGKRLQARAIVVACG----------LEANALLAENWL 205
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+P+KG L + + + +++H +E GY G HG S++ G L
Sbjct: 206 RPKKGQLAITDRYGP-QVHHQLVELGY----------GASAHGGGTSVAFNLQPRPTGQL 254
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++GSSRQF E++ ++ ++ RA F P L L + S GLR PDG
Sbjct: 255 LIGSSRQFDNRKRELDLPLLAQMLDRARHFVPALATLNIIRCWS------GLRAASPDGN 308
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN--PLKVDS 485
P+IGP P ++LA GHEGLG++ A +AEL+A +L PL D+
Sbjct: 309 PLIGPHPTRRGLWLALGHEGLGVTTAPASAELLAAQILDERCPLAPDA 356
>gi|416901064|ref|ZP_11930196.1| FAD dependent oxidoreductase family protein [Escherichia coli
STEC_7v]
gi|417118087|ref|ZP_11968663.1| FAD dependent oxidoreductase [Escherichia coli 1.2741]
gi|422802042|ref|ZP_16850537.1| FAD dependent oxidoreductase [Escherichia coli M863]
gi|323965467|gb|EGB60922.1| FAD dependent oxidoreductase [Escherichia coli M863]
gi|327250275|gb|EGE61994.1| FAD dependent oxidoreductase family protein [Escherichia coli
STEC_7v]
gi|386138511|gb|EIG79670.1| FAD dependent oxidoreductase [Escherichia coli 1.2741]
Length = 369
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 184/410 (44%), Gaps = 55/410 (13%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEI 139
++ +VI+IGAGIIG + A QL + V ++D +GAT AG G++ + P +E+
Sbjct: 2 NSTEVIVIGAGIIGASCAWQL-AKRGVRVTLIDNGR--AGATAAGMGHLVCMDDDP-AEL 57
Query: 140 WDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
L+ S +LW+ L L + W G+L + TPEEL + +E+ ++L
Sbjct: 58 -TLSAWSLELWRTLTPQLPES-------CAWCGCGTLWLAETPEELEIAREKQRRLASHE 109
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHF-ASKGRYAE 258
+ +E S++ L + E L G S ++P D + Y R F A+ G
Sbjct: 110 VNSEMQSAAQLAEREVMLRPGL-SGGLWVPGD-------GIVYAPNVARWFIANAGDKLT 161
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
DP L E V AIVVA G + +L+ +
Sbjct: 162 HLVDPAIRL-------EEPTVTLQSGRQLRADAIVVACGLGANTLLGEPW---------- 204
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++ +KG L + + + L +NH +E GY G HG S++ G
Sbjct: 205 LRAKKGQLAITDRYGPL-VNHQLVELGY----------GASAHGSGTSVAFNVQPRPTGQ 253
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++GSSRQF + E++ ++ + RA F P L L + S G R DG
Sbjct: 254 LLIGSSRQFDNEDRELDLPLLAAMLSRAQHFLPSLATLNIIRCWS------GFRAASQDG 307
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++GP P + V+LA GHEGLG++ A +A L+ +L V AP+
Sbjct: 308 NPLLGPHPSRAGVWLALGHEGLGVTTAPASASLLVAQLLGERSLVSPAPW 357
>gi|398884328|ref|ZP_10639266.1| glycine/D-amino acid oxidase, deaminating, partial [Pseudomonas sp.
GM60]
gi|398194909|gb|EJM81969.1| glycine/D-amino acid oxidase, deaminating, partial [Pseudomonas sp.
GM60]
Length = 361
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 180/413 (43%), Gaps = 67/413 (16%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A Q L L V V+D + AT AG G++ ++ P +L
Sbjct: 8 DVIVIGAGIIGAACA-QALARRGLRVLVLDAGL--HSATAAGMGHLLVLDDNPA----EL 60
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL L W+ LA L Q ++ G+L + EE+ + + L G+
Sbjct: 61 ALSQYSLQRWRELAPDLP-------QGCAYRNNGTLWLAANAEEMAVAHSKYLNLQTQGV 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E ++ + L EPEL ED L I +A A +
Sbjct: 114 ACELIARNALRAREPEL--SEDLEGGLL--------------INGDGILYAPA--TANWM 155
Query: 261 HDPVTCLLRSNSTGEVEA--VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
D R EV+ V+ S +A+++A G ++ ++ ++P
Sbjct: 156 LDTADIEQRRARVSEVDGNRVRLDDGQWLSAEAVILANG----------IQANDLCPELP 205
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + K++H +E GYV P S + G
Sbjct: 206 IEPKKGHLLITDRYPG-KVSHTLVELGYVTSAHNATGP---------STACNIQPRPTGQ 255
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L +G+SRQF + +VE ++ ++ KRA E+ P L L + + G R PDG
Sbjct: 256 LFIGASRQFGTTDPQVEGWMLAKMLKRATEYMPGLAQL------NGIRAWTGFRAASPDG 309
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
P+IG P ++LA GHEGLG++ A GTA+L+ + ++ P A Q
Sbjct: 310 LPLIGEHPSRKGLWLAVGHEGLGVTTAPGTADLLVAQLFN-----ETPPLAAQ 357
>gi|389781022|ref|ZP_10194479.1| D-amino acid oxidase [Rhodanobacter spathiphylli B39]
gi|388435531|gb|EIL92433.1| D-amino acid oxidase [Rhodanobacter spathiphylli B39]
Length = 366
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 182/411 (44%), Gaps = 57/411 (13%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
+D+I+ GAGI+G + A + + + L VA+V+ GAT G++ + P
Sbjct: 4 YDLIVAGAGIVGASCANEASI-AGLRVAIVEPGPVGGGATACSMGHLVAMDDDPAE--LA 60
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
LA S + W+ A L + + G+L + R E+ + RV +L AG
Sbjct: 61 LARYSLRRWEAFAH---------LAEAEFSRCGTLWVARNDGEVAGIAARVARLNAAGGE 111
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFA--SKGRYAEF 259
A + + L + EP L G + +P + AV Y + +H ++ R A
Sbjct: 112 AHAVDARTLYELEPALAAGL-AGGMLVPAE-------AVVYPPRVAQHLVRCAQQRGARL 163
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
+ RS +V +L + +++A GC L+ L
Sbjct: 164 HAG------RSVRRLGRASVTLDDGSLLTGP-VLLATGCALPRLLPQLPLRPR------- 209
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILS-ISMTATTDVIGN 378
KGHLL+ E + L L H +E GY HG S ++ G
Sbjct: 210 ---KGHLLITERYPGL-LRHQVLELGYA----------DSAHGDAASSVAFNVQPRPTGQ 255
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++GSSR+F + V ++ R+ + A F P LR L + GLRP PDG
Sbjct: 256 LLVGSSREFDVEDPAVSPAMLQRMLRHAFRFMPALRQL------QGLRAWTGLRPATPDG 309
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
+P +G VPG +++A GHEGLG++ ALG+A L+ D++L + +D AP++
Sbjct: 310 RPYLGAVPGHPDLWVAAGHEGLGVTTALGSARLLIDLLLGHAPAIDPAPYS 360
>gi|290512713|ref|ZP_06552079.1| D-amino-acid oxidase [Klebsiella sp. 1_1_55]
gi|289775054|gb|EFD83056.1| D-amino-acid oxidase [Klebsiella sp. 1_1_55]
Length = 369
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 178/407 (43%), Gaps = 59/407 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A QL SV ++D P GAT AG G++ + P +L
Sbjct: 5 DVIVIGAGIIGAACAWQL-AKRGQSVTLIDDGQP--GATAAGMGHLVCMDDDPA----EL 57
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL + L W+ + + D W+ G+L + + EE+ + ++ ++L +
Sbjct: 58 ALSAWSLERWRAITPRMPDH-------CAWRGCGTLWLAESEEEMAVAGDKQRRLASYQV 110
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
+E + + EP L + ++P D + Y R +
Sbjct: 111 PSERQTPQQIAGREPLLRG-GLAGGLWVPGDG-------IVYAPNVARWLMADA------ 156
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
D +TCL S V + +AIVVA G L ++ + ++
Sbjct: 157 GDHLTCLHDSAQAITEPQVLLASGKRLQARAIVVACG----------LEANALLAENWLR 206
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KG L + + + +++H +E GY G HG S++ G L+
Sbjct: 207 PKKGQLAITDRYRP-RVHHQLVELGY----------GASAHGGGTSVAFNLQPRPTGQLL 255
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF E++ ++ ++ RA F P L L + S GLR DG P
Sbjct: 256 IGSSRQFDNRERELDLPLLAQMLDRARHFVPALATLNIIRCWS------GLRAASQDGNP 309
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN--PLKVDS 485
+IGP P V+LA GHEGLG++ A TAEL+A +L PL D+
Sbjct: 310 LIGPHPTRRGVWLALGHEGLGVTTAPATAELLAAQILDERCPLAPDA 356
>gi|346725419|ref|YP_004852088.1| D-amino acid oxidase [Xanthomonas axonopodis pv. citrumelo F1]
gi|346650166|gb|AEO42790.1| D-amino acid oxidase [Xanthomonas axonopodis pv. citrumelo F1]
Length = 386
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 191/419 (45%), Gaps = 61/419 (14%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
++D+I+IGAGI+G A L VA+V+ GAT A G++ + P
Sbjct: 19 SYDLIVIGAGIVGAACAEAAAG-EGLRVAIVEPGPIGGGATAAAMGHLVAMDDDPAE--L 75
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
L+ S +LW+ A +L D + + G+L + R EL + ++ +L AGL
Sbjct: 76 ALSAYSLRLWERFA-TLSDAE--------FSRCGTLWVARDARELAAVPAKIARLATAGL 126
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
AE + ++ L EP+L+ G + +P + AV Y + RH
Sbjct: 127 HAEAIDAAQLYALEPQLVPGL-AGGMRVPDE-------AVVYPPRVARHLVG-------- 170
Query: 261 HDPVTCL--LRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
V C R + V +Q L + + SG + LL E +
Sbjct: 171 ---VACTSGARLFAGRRVVQLQAHAVRLDDGQTLAGPVLVASGVALPQLLPE------LA 221
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QILSISMTATTDVIG 377
++PRKGHL++ + L + H +E GY HG S++ G
Sbjct: 222 LRPRKGHLVITDRHPGL-IRHQLLELGY----------ADSAHGADDTSVAFNVQPRPTG 270
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
+++GSSRQF + + ++ ++ +RA + P LR+L +V GLRP PD
Sbjct: 271 QILIGSSRQFGEHDRALSMPVLQQMLQRAFAYLPVLREL------QAIRVWTGLRPATPD 324
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF----AVQG 492
G+P +G VPG V++A GHEGLG++ ALG+A ++ D +L +D AP+ AVQG
Sbjct: 325 GRPYLGVVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAIDPAPYAPARAVQG 383
>gi|346642792|ref|YP_258540.2| FAD dependent oxidoreductase [Pseudomonas protegens Pf-5]
gi|341579934|gb|AAY90696.2| FAD dependent oxidoreductase [Pseudomonas protegens Pf-5]
Length = 373
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 189/408 (46%), Gaps = 57/408 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGIIG A +L L V V+D GATGAG G++ ++ P +L
Sbjct: 8 EVIVVGAGIIGAACAHEL-ARRGLRVQVLDDGR--GGATGAGMGHLVVMDDNPA----EL 60
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S LW+ L + L D ++ G+L + E + + + + L + G+
Sbjct: 61 ALSHYSLGLWRQLRERLPD-------ACAYRNCGTLWLAADHHERDLARAKQQALADHGI 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E L S+ L EP L G + A + D+ L A A A+ GN +
Sbjct: 114 SGELLDSTRLASLEPMLRKGL-AGALKISGDAILYAP-ATAHWLLGNASLIRR------- 164
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
+RS + +VE + + + +++A G E++ +P++
Sbjct: 165 ---QAARVRSVAGDQVE---LADGRVLRAQRVLLANG----------FAARELLPALPLR 208
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + ++ H +E GY +HG S++ G L+
Sbjct: 209 PKKGHLLISDRYPH-QVGHQLVELGYAAS-------AHASHGT--SVAFNVQPRPTGQLL 258
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF + +E +++ + +RA ++ P L +L + + G R PDG P
Sbjct: 259 IGSSRQFDTLDPAIEPSVLAPMLRRAVDYLPALAEL------NGIRAWTGFRAATPDGLP 312
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
++G P ++LA GHEGLG++ A G+A L+ D++L +D P+
Sbjct: 313 ILGEHPRQPGLWLAVGHEGLGVTTAPGSARLLVDLMLGECPALDPRPY 360
>gi|421479970|ref|ZP_15927628.1| FAD dependent oxidoreductase [Burkholderia multivorans CF2]
gi|400221982|gb|EJO52396.1| FAD dependent oxidoreductase [Burkholderia multivorans CF2]
Length = 375
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 191/410 (46%), Gaps = 61/410 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V VVD GATGAG G+ +V + L
Sbjct: 7 DVVVIGAGIVGAACAHEL-AQRGLRVIVVDDA--SGGATGAGMGH--LVAMDDNAAELAL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW+ L+ + D ++ G+L + E+ + + + L G+
Sbjct: 62 SHYSIELWRALSGDMPDG-------CAYRNCGTLWLAADAHEMDLARAKQATLAAHGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYI-EKGNRHFASKGRYAEFYH 261
E L ++ L + EP L G A +P D L A +A +++ ++G
Sbjct: 115 ELLDAAALARLEPMLRPGLGG-ALKIPGDGILYAPVAASWLLQRGP-------------- 159
Query: 262 DPVTCLLRSNSTGEVEAVQ---TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
+LR + +VE + S + L +++ +VVA G + +L+ +L P
Sbjct: 160 ---GIVLRRDRAVDVEGARVTLASGDVLRAQR-VVVANGVAARTLLPEL----------P 205
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + ++ H +E GY + S++ G
Sbjct: 206 LRPKKGHLLITDRYPG-RVAHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQ 255
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++GSSRQF + +E ++ R+ +RAA + P L +L + + G R PDG
Sbjct: 256 LLIGSSRQFDTEDPRIEPPVLARMLRRAAGYLPDLAEL------NAIRAWTGFRAASPDG 309
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++G P + V+LA GHEGLG++ A G+A L+A + +D P+
Sbjct: 310 LPLLGEHPARAGVWLAVGHEGLGVTTAPGSARLLAAQMAGERPAIDIEPY 359
>gi|182435422|ref|YP_001823141.1| oxidoreductase [Streptomyces griseus subsp. griseus NBRC 13350]
gi|326776047|ref|ZP_08235312.1| FAD dependent oxidoreductase [Streptomyces griseus XylebKG-1]
gi|178463938|dbj|BAG18458.1| putative secreted oxidoreductase [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326656380|gb|EGE41226.1| FAD dependent oxidoreductase [Streptomyces griseus XylebKG-1]
Length = 386
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 165/377 (43%), Gaps = 37/377 (9%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L V V+D+ +G T G+G I + + PG E+ +LA S LW + L + L+
Sbjct: 24 LGVTVLDRGPVGAGTTSRGEGNILLSDKEPGPEL-ELARLSRDLWDRAGEELGPESLE-- 80
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+ G L++ TPE L L + AG+R E + L EP G
Sbjct: 81 ----LEAKGGLVVASTPEALGALHAFAARQTAAGVRTEAVEHVGDL--EPHSAPGLPGGV 134
Query: 226 AFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT 285
+ P D+Q+ +LA A + + ++ E + + G + V+T+
Sbjct: 135 HY-PEDAQVQPVLAAAALLRAAVRHGARTHTGE------AAGAVTGADGRITGVRTADGA 187
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
+ A+V AAG W G + L EI+ PR+G +LV E + + H A
Sbjct: 188 VLPADAVVNAAGTWGGEVGRRLGAPVEIL------PRRGFVLVTEPLPPM-IRHKVYSAD 240
Query: 346 YVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKR 405
YV + + + L S G +++G+SR+ GF+T + ++ + +
Sbjct: 241 YVAN--------VASSDEGLETSCVVEGTRAGTILIGASRERVGFDTSMNPAVVATLAAQ 292
Query: 406 AAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLA 465
A +P LR + L R R G RPY PD PVIGP P + V A GHEG G+ LA
Sbjct: 293 ACRLFPFLRGVHLI-----RAYR-GFRPYCPDHLPVIGPDPRVPGVIHACGHEGAGIGLA 346
Query: 466 LGTAELVADMVLTNPLK 482
GT LV +L P +
Sbjct: 347 PGTGALVTAHLLGRPWR 363
>gi|29828276|ref|NP_822910.1| oxidoreductase [Streptomyces avermitilis MA-4680]
gi|29605379|dbj|BAC69445.1| putative oxidoreductase [Streptomyces avermitilis MA-4680]
Length = 415
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 166/361 (45%), Gaps = 46/361 (12%)
Query: 133 RTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERV 192
+ PG E+ +LAL S +LW L + R G + ++ G L++ TPE L L +
Sbjct: 57 KEPGPEL-ELALLSGRLWAELVE--RRPGFG--HAVEYEAKGGLVVAETPEALTALTDLA 111
Query: 193 KQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS 252
+ AG+ ++ L + EP L G + A P D+Q+ LA A++ + AS
Sbjct: 112 ARQSAAGVEVSPAAADQLRELEPHLAPGL-AGAVRYPQDAQVMPALAAAHLVR-----AS 165
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312
R A VT +LR+ G V V+T + +++ A+V AAG W G ++ R
Sbjct: 166 GARPATGAS--VTAVLRTPD-GSVRGVRTDRGDIHAP-AVVNAAGTWGG----EVARLAG 217
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+ L PV PR+G +LV E + + H A YV + L+ S
Sbjct: 218 VRL--PVLPRRGFVLVTEPLPRM-IWHKVYAADYVAD--------VASDSAALATSPVVE 266
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR--IG 430
G +++G+SR+ GF+ ++ + A +P L + VR +G
Sbjct: 267 GTAAGPVLIGASRERVGFDRTFSLPVVRELAAGATRLFPFL--------VGVHAVRAYVG 318
Query: 431 LRPYMPDGKPVIGP---VPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAP 487
RPY+PD P IGP VPGL F A GHEG G+ LA GT L+A ++ +D P
Sbjct: 319 FRPYLPDHLPAIGPDARVPGL---FHACGHEGAGIGLATGTGYLIAQVLAGRDPDLDLTP 375
Query: 488 F 488
F
Sbjct: 376 F 376
>gi|345851013|ref|ZP_08803998.1| oxidoreductase [Streptomyces zinciresistens K42]
gi|345637491|gb|EGX59013.1| oxidoreductase [Streptomyces zinciresistens K42]
Length = 383
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 157/356 (44%), Gaps = 39/356 (10%)
Query: 133 RTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERV 192
+ PG E+ LAL S LW LA+ + ++ G +++ + L L+E
Sbjct: 57 KEPGPELA-LALLSTGLWAGLAEEFG-------TAVEYEAKGGVVVASSTGGLTALEEFA 108
Query: 193 KQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS 252
+ AG+ AE L+ L EP L G + P DSQ+ LA A++ +G+
Sbjct: 109 QGQRAAGVLAEPLAPHALYDLEPHLAPGLPGGVHY-PQDSQVMPALAAAHLIRGSGARLL 167
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312
G VT +LR+ G V V+T + L + A+V AAG W G L L T
Sbjct: 168 TGHT-------VTAVLRTPG-GAVRGVRTDRGDLLAP-AVVNAAGTWGGDLA--ALAGTH 216
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+ PV PR+G +LV E ++ H A YV + L S
Sbjct: 217 L----PVLPRRGFVLVTEPLPR-RVRHKVYAADYVAD--------VASDSAALQTSPVVE 263
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G +++G+SR+ GF+ + + A +P L D + + +G R
Sbjct: 264 GTAAGPVLIGASRERVGFDRTYSLPALRALAAGATRLFPFLAD------VHALRAYLGFR 317
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PY+PD P IGP P + + A GHEG G+ LA T L+A ++ +P +D APF
Sbjct: 318 PYLPDHLPAIGPDPRVPGLHHACGHEGAGIGLATATGHLIAQVLTGHPPDLDLAPF 373
>gi|288937308|ref|YP_003441367.1| FAD dependent oxidoreductase [Klebsiella variicola At-22]
gi|288892017|gb|ADC60335.1| FAD dependent oxidoreductase [Klebsiella variicola At-22]
Length = 369
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 174/397 (43%), Gaps = 57/397 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A QL SV ++D P GAT AG G++ + P +L
Sbjct: 5 DVIVIGAGIIGAACAWQL-AKRGQSVTLIDDGQP--GATAAGMGHLVCMDDDPA----EL 57
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL + L W+ + + D W+ G+L + + EE+ + E++++L +
Sbjct: 58 ALSAWSLERWRAITPRMPDH-------CAWRGCGTLWLAESEEEMAVAGEKLRRLAGHQV 110
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
+E + + EP L + ++P D + Y R +
Sbjct: 111 PSERQTPQQIAGREPLLRG-GLAGGLWVPGDG-------IVYAPNVARWLMADA------ 156
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
D +TCL S V + +AIVVA G L ++ + ++
Sbjct: 157 GDHLTCLHDSAQAITEPQVLLASGKRLQARAIVVACG----------LEANALLAENWLR 206
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KG L + + + ++ H +E GY G HG S++ G L+
Sbjct: 207 PKKGQLAITDRYRP-RVQHQLVELGY----------GASAHGGGTSVAFNLQPRPTGQLL 255
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF E++ ++ ++ RA F P L L + S GLR DG P
Sbjct: 256 IGSSRQFDNRERELDLPLLAQMLDRARHFVPALATLNIIRCWS------GLRAASQDGNP 309
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
+IGP P ++LA GHEGLG++ A TAEL+A +L
Sbjct: 310 LIGPHPTRRGLWLALGHEGLGVTTAPATAELLAAQIL 346
>gi|409425907|ref|ZP_11260481.1| FAD-dependent oxidoreductase [Pseudomonas sp. HYS]
Length = 371
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 180/408 (44%), Gaps = 58/408 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A Q L L V V+D + GAT AG G++ ++ P +L
Sbjct: 8 DVIVIGAGIIGAACA-QSLAARGLRVLVLDAGL--HGATAAGMGHLLVLDDNPA----EL 60
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL + L W+ LA L ++ G+L + EE+ + + + L G+
Sbjct: 61 ALSQHSLQRWRELAPQLPAD-------CAYRSNGTLWLAANAEEMAVAEHKFNVLQAQGV 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E ++ L Q EP L G + + D L A ++ + R + R
Sbjct: 114 TCELVAGHALRQREPALREGLEG-GLLINGDGILYAPATARWMLQSPRIEQRRAR----- 167
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
VT L + V+ S +A+V+A G ++ ++ ++P++
Sbjct: 168 ---VTAL-------QGNRVRLDNGQWLSAEAVVLANG----------IQAVDLCPELPIE 207
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + + H +E GYV P S + G L
Sbjct: 208 PKKGHLLITDRYPG-TVTHTLVELGYVTSAHTASGP---------STACNIQPRPTGQLF 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+G+SRQF + VE ++ R+ KRA E+ P L L + + G R PDG P
Sbjct: 258 IGASRQFGTTDPAVEGWMLARMLKRATEYMPGLAHL------NGIRAWTGFRAASPDGLP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
++G P ++LA GHEGLG++ A TA+L++ + + + P+
Sbjct: 312 LVGRHPHQDGLWLAVGHEGLGVTTAPATADLLSAQLFDETPPLAARPY 359
>gi|271967289|ref|YP_003341485.1| protein SoxB2 [Streptosporangium roseum DSM 43021]
gi|270510464|gb|ACZ88742.1| SoxB2 [Streptosporangium roseum DSM 43021]
Length = 379
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 173/386 (44%), Gaps = 43/386 (11%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L V VVD+ G TGAG+G + + + PG E+ DLAL SN LW+ LA+ LD
Sbjct: 25 LDVVVVDRGPVAGGTTGAGEGNVLVSDKEPGPEL-DLALLSNGLWRELAE------LDGF 77
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+ ++ G L++ T E L L + G+ ++S L EP L G +
Sbjct: 78 E---FEAKGGLVVAETGEVLEALTGLAGK---QGVEHTVVASGGLNDYEPHL-AGGFAGG 130
Query: 226 AFLPYDSQLDAMLAVA-YIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKN 284
F P D+Q+ MLA A I +G F GR A VT + V T
Sbjct: 131 VFYPQDAQVQPMLAAARLIRRGADSF---GRGALMLRTGVTVTGFLRDGDRIGGVTTDHG 187
Query: 285 TLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEA 344
+ + A+V AAG W G + + +P+ PR+G +LV E F+ + H A
Sbjct: 188 DILAG-AVVNAAGTWGGEVA------AMAGVHVPILPRRGFILVTEPFDRPLIRHKVYTA 240
Query: 345 GYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWK 404
YV + + + L S G +++G+SR+ GF+ V +++R+ +
Sbjct: 241 AYVTN--------VASDSEGLETSAVVEGTPSGPVLIGASRERVGFDRTVSVPVLERLAR 292
Query: 405 RAAEFYPKLRDLCLADFISNRKVR--IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGL 462
+A E +P L D R +R G RPY PD PVIG P + A GHEG G+
Sbjct: 293 QAVELFPALAD--------RRAIRAYCGFRPYCPDHLPVIGEDPRAPGLHHACGHEGAGI 344
Query: 463 SLALGTAELVADMVLTNPLKVDSAPF 488
LA T L+A + +D PF
Sbjct: 345 GLAPATGHLIAQSLAGLRPDLDLTPF 370
>gi|444353314|ref|YP_007389458.1| D-amino-acid oxidase (EC 1.4.3.3) [Enterobacter aerogenes EA1509E]
gi|443904144|emb|CCG31918.1| D-amino-acid oxidase (EC 1.4.3.3) [Enterobacter aerogenes EA1509E]
Length = 369
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 182/409 (44%), Gaps = 63/409 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A QL SV ++D P GAT AG G++ + P +L
Sbjct: 5 DVIVIGAGIIGAACAWQL-AKRGQSVTLIDDGQP--GATAAGMGHLVCMDDDPA----EL 57
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL + L W+ + + D W+ G+L + + EE+ ++ +++ +
Sbjct: 58 ALSAWSLERWRAITPRMPDN-------CAWRGCGTLWLAESEEEMAGAGDKQRRMAGHQV 110
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYI--EKGNRHFASKGRYAE 258
+E + + EP L G + ++P D + A ++ + GN
Sbjct: 111 HSELQTPQQIAGREPLLRDGL-AGGLWVPGDGIVYAPNVARWLITDAGNH---------- 159
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
+TCL S T E V + +AIVVA G L ++ +
Sbjct: 160 -----LTCLRDSVQTIEEPQVLLASGQRLQARAIVVACG----------LEANALLAENW 204
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KG L + + + +++H +E GY G HG S++ G
Sbjct: 205 LRPKKGQLAITDRYQP-RVHHQLVELGY----------GASAHGGGTSVAFNLQPRPTGQ 253
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++GSSRQF E++ ++ ++ RA F P L L + S GLR DG
Sbjct: 254 LLIGSSRQFDNRERELDLPLLAQMLDRARHFVPALATLNIIRCWS------GLRAASQDG 307
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN--PLKVDS 485
P+IGP P ++LA GHEGLG++ A +AEL+A +L PL D+
Sbjct: 308 NPLIGPHPTRRGLWLALGHEGLGVTTAPASAELLAAQILDERCPLAPDA 356
>gi|429199603|ref|ZP_19191351.1| FAD dependent oxidoreductase [Streptomyces ipomoeae 91-03]
gi|428664687|gb|EKX63962.1| FAD dependent oxidoreductase [Streptomyces ipomoeae 91-03]
Length = 425
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 176/383 (45%), Gaps = 37/383 (9%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L V VVD+ G TGAG+G + + + PG E+ +LAL S +LW LA + GL
Sbjct: 30 LDVVVVDRGPVAGGTTGAGEGNLLVSDKKPGPEL-ELALLSGRLWAELA---AEPGLG-- 83
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
++ G L++ TP+ L L+ AG+ A + + L EP L G +
Sbjct: 84 AAFEYEAKGGLVVASTPDGLTALEGFAAGQRAAGVEAITVEAHRLPALEPHLAPGL-AGG 142
Query: 226 AFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT 285
+ P D+Q+ LA A++ + + GR VT +LR+ + G V V+T +
Sbjct: 143 VYYPQDAQVMPTLAAAHLVRASGARLRTGRT-------VTEVLRT-ADGTVRGVRTDRGE 194
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
+++ A+V AAG W G L + +PV PR+G +LV E L + H A
Sbjct: 195 IHAP-AVVNAAGTWGGELA------ALAGVGLPVLPRRGFVLVTEPLPRL-VRHKVYAAD 246
Query: 346 YVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKR 405
YV + L S G +++G+SR+ GF+ ++ +
Sbjct: 247 YVAD--------VASDSAALQTSPVVEGTAAGPVLIGASRERVGFDRSFSLPVVRALAAG 298
Query: 406 AAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLA 465
A +P L + + + +G RPYMPD P IGP P + +F A GHEG G+ LA
Sbjct: 299 ATRLFPFL------ERVRAMRTYVGFRPYMPDHLPAIGPDPRVPGLFHACGHEGAGIGLA 352
Query: 466 LGTAELVADMVLTNPLKVDSAPF 488
GT L+A ++ ++ PF
Sbjct: 353 TGTGYLIAQVLGGKAPELGLGPF 375
>gi|398879685|ref|ZP_10634773.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM67]
gi|398195829|gb|EJM82856.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM67]
Length = 371
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 179/413 (43%), Gaps = 67/413 (16%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A Q L L V V+D + AT AG G++ ++ P +L
Sbjct: 8 DVIVIGAGIIGAACA-QALARRGLRVLVLDAGL--HSATAAGMGHLLVLDDNPA----EL 60
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL L W+ LA L + ++ G+L + EE+ + + L G+
Sbjct: 61 ALSQYSLQRWRELAPDLPEG-------CAYRSNGTLWLAANAEEMAVAHSKYLNLQTQGV 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E ++ + L EPEL ED L I +A A +
Sbjct: 114 ACELIARNALRAREPELR--EDLEGGLL--------------INGDGILYAPA--TANWM 155
Query: 261 HDPVTCLLRSNSTGEVEA--VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
D R EV+ V+ S +A+++A G ++ ++ ++P
Sbjct: 156 LDTADIEQRRARVSEVDGNRVRLDDGQWLSAEAVILANG----------IQANDLCPELP 205
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + K+ H +E GYV P S + G
Sbjct: 206 IEPKKGHLLITDRYPG-KVTHTLVELGYVTSAHNATGP---------STACNIQPRPTGQ 255
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L +G+SRQF + +VE ++ ++ KRA E+ P L L + + G R PDG
Sbjct: 256 LFIGASRQFGTTDPQVEGWMLAKMLKRATEYMPGLAQL------NGIRAWTGFRAASPDG 309
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
P+IG P ++LA GHEGLG++ A GTA+L+ + ++ P A Q
Sbjct: 310 LPLIGEHPSRKGLWLAVGHEGLGVTTAPGTADLLVAQLFN-----ETPPLAAQ 357
>gi|398865955|ref|ZP_10621458.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM78]
gi|398241854|gb|EJN27490.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM78]
Length = 371
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 184/416 (44%), Gaps = 68/416 (16%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A Q L L V V+D + AT AG G++ ++ + +L
Sbjct: 8 DVIVIGAGIIGAACA-QALARRGLRVLVLDAGL--HNATAAGMGHLLVLD----DNVAEL 60
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL L W+ A L D ++ G+L + EE+ + + + L G+
Sbjct: 61 ALSQYSLQRWREQAPQLPDN-------CAYRCNGTLWLAANAEEMEVARSKYLNLQAQGI 113
Query: 201 RAEYLSSSDLLQAEPELMVGED-----SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E ++ + L EPEL G + + L + + ML IE+ + R
Sbjct: 114 ACELIARNALRTREPELHDGLEGGLLINGDGILYAPATANWMLDTTGIEQ------RRAR 167
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
+E + V+ + +A+++A G ++ ++
Sbjct: 168 VSEV---------------DGNRVRLEDGQWLNAEAVILANG----------IQANDLCP 202
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
++P++P+KGHLL+ + + K+ H +E GYV P S +
Sbjct: 203 ELPIEPKKGHLLITDRYPG-KVTHTLVELGYVTSAHNATGP---------STACNIQPRP 252
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G L +G+SRQF +TEVE ++ ++ KRA+E+ P L L + + G R
Sbjct: 253 TGQLFIGASRQFGTTDTEVESWMLAKMLKRASEYMPGLAQL------NGIRAWTGFRAAS 306
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
PDG P++G P ++LA GHEGLG++ A GTA+L+ + + + P+ Q
Sbjct: 307 PDGLPLVGQHPKRKGLWLAVGHEGLGVTTAPGTADLLVAQLFNETPPLAAQPYLPQ 362
>gi|206579763|ref|YP_002240612.1| FAD-dependent oxidoreductase [Klebsiella pneumoniae 342]
gi|206568821|gb|ACI10597.1| FAD-dependent oxidoreductase [Klebsiella pneumoniae 342]
Length = 369
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 178/406 (43%), Gaps = 59/406 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A QL SV ++D SGAT AG G++ + P +L
Sbjct: 5 DVIVIGAGIIGAACAWQL-AKRGQSVTLIDDGQ--SGATAAGMGHLVCMDDDPA----EL 57
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL + L W+ + + D W+ G+L + + EE+ + +++++L +
Sbjct: 58 ALSAWSLERWRAITPRMPDH-------CAWRGCGTLWLAESEEEMAVAGDKLRRLAGHQV 110
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
+E + + EP L + ++P D + Y R +
Sbjct: 111 PSELQTPQQIAGREPLLRG-GLAGGLWVPGDG-------IVYAPNVARWLMADA------ 156
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
D +TCL S V + +AIVVA G L ++ + ++
Sbjct: 157 GDHLTCLHDSAQAITEPQVLLASGKRLQARAIVVACG----------LEANALLAENWLR 206
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KG L + + + +++H +E GY G HG S++ G L+
Sbjct: 207 PKKGQLAITDRYRP-RVHHQLVELGY----------GASAHGGGTSVAFNLQPRPTGQLL 255
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF E++ ++ ++ RA F P L L + S GLR DG P
Sbjct: 256 IGSSRQFDNRERELDLPLLAQMLDRARHFVPALATLNIIRCWS------GLRAASQDGNP 309
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN--PLKVD 484
+IGP P V+LA GHEGLG++ A TAEL+A +L PL D
Sbjct: 310 LIGPHPTRRGVWLALGHEGLGVTTAPATAELLAAQILDERCPLAPD 355
>gi|377813015|ref|YP_005042264.1| FAD dependent oxidoreductase [Burkholderia sp. YI23]
gi|357937819|gb|AET91377.1| FAD dependent oxidoreductase [Burkholderia sp. YI23]
Length = 379
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 165/367 (44%), Gaps = 62/367 (16%)
Query: 127 YIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELV 186
+I +++ +P + LA S +LW L LR++ + + G++ + EEL
Sbjct: 47 HIVVMNDSPAE--FALARASRELWHALGPQLRERD-------AFARCGTVWVAEDEEELD 97
Query: 187 MLKERVKQLCEAGLRAEYLSSSDLLQAEPEL-------MVGEDSRAAFLPYDSQLDAMLA 239
+ AG+RA L + L +AEP + ++ +D + P +Q
Sbjct: 98 AARAMRDAFAAAGVRAHLLDRAALREAEPAVSHAMHGGLLIDDDAIVYAPCAAQF----- 152
Query: 240 VAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCW 299
+ R S G C +R+ G A T N A V+ A
Sbjct: 153 --LLTSSPRIRVSTG-----------CAVRAVDAGGTHASATLANGEQRMAAHVLVA--- 196
Query: 300 SGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQV 359
+ L E++ +P++ +KGHLL+ + + + L H +E GY+
Sbjct: 197 ------NGLAAPELIAGVPIEAKKGHLLITDRYPGM-LRHQVLELGYIK---------SA 240
Query: 360 NHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLA 419
+H + S++ A G L++GSSRQF + VE ++ + RA+ + P + L
Sbjct: 241 HHARGTSVAFNAQARPTGQLLIGSSRQFGTLDPAVEIDVLGAMLARASRYLPGIGAL--- 297
Query: 420 DFISNRKVRIGLRPYMPDGKPVIGPV--PGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
D I + G R PDG P+IGP PG +++LATGHEGLG++ +LGTA+L+A +L
Sbjct: 298 DAI---RAWTGFRAATPDGLPLIGPARFPG-DRLWLATGHEGLGVTTSLGTAQLIAAHIL 353
Query: 478 TNPLKVD 484
P+ D
Sbjct: 354 GEPVPFD 360
>gi|221196681|ref|ZP_03569728.1| FAD-dependent oxidoreductase [Burkholderia multivorans CGD2M]
gi|221203350|ref|ZP_03576369.1| FAD-dependent oxidoreductase [Burkholderia multivorans CGD2]
gi|221177284|gb|EEE09712.1| FAD-dependent oxidoreductase [Burkholderia multivorans CGD2]
gi|221183235|gb|EEE15635.1| FAD-dependent oxidoreductase [Burkholderia multivorans CGD2M]
Length = 375
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 189/410 (46%), Gaps = 61/410 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V VVD GATGAG G+ +V + L
Sbjct: 7 DVVVIGAGIVGAACAHEL-AQRGLRVIVVDDA--SGGATGAGMGH--LVAMDDNAAELAL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW+ L+ + D ++ G+L + E+ + + + L G+
Sbjct: 62 SHYSIELWRALSGDMPDG-------CAYRNCGTLWLAADAHEMDLARAKQATLAAHGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYI-EKGNRHFASKGRYAEFYH 261
E L ++ L + EP L G A +P D L A +A ++ ++G
Sbjct: 115 ELLDAAALARLEPMLRPGLGG-ALKIPGDGILYAPVAANWLLQRGP-------------- 159
Query: 262 DPVTCLLRSNSTGEVEAVQ---TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
+LR + +VE + S + L +++ +VVA G + +L+ +L P
Sbjct: 160 ---GIVLRRDRAVDVEGARVTLASGDVLRAQR-VVVANGVAARTLLPEL----------P 205
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + ++ H +E GY + S++ G
Sbjct: 206 LRPKKGHLLITDRYPG-RVAHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQ 255
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++GSSRQF + +E ++ R+ +RAA + P L +L + + G R PDG
Sbjct: 256 LLIGSSRQFDTEDPRIEPPVLARMLRRAAAYLPDLAEL------NAIRAWTGFRAASPDG 309
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++G P V+LA GHEGLG++ A G+A L+A + +D P+
Sbjct: 310 LPLLGEHPARPGVWLAVGHEGLGVTTAPGSARLLAAQMAGERPAIDIEPY 359
>gi|238023841|ref|YP_002908073.1| putative oxidoreductase [Burkholderia glumae BGR1]
gi|237878506|gb|ACR30838.1| Putative oxidoreductase [Burkholderia glumae BGR1]
Length = 375
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 183/396 (46%), Gaps = 57/396 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGI+G A +L L V V+D GAT AG G++ +++ TP +L
Sbjct: 5 DVIVIGAGIVGAACAAELAA-RGLDVEVLDAGGIGGGATAAGMGHLVVMNDTPA----EL 59
Query: 143 AL--RSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL RS W+ LA LR Q + + G+L + EEL + AG+
Sbjct: 60 ALSRRSLARWRALAPQLR-------QCDAYLRCGTLWVAADDEELEAARAMRDGYAAAGV 112
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEK---GNRHFASKGRYA 257
AE L ++ L EP ++ + + D + A A ++ + G + R A
Sbjct: 113 SAEVLDAAALGAREP-MLAAGLAGGLLVDGDGIVYAPSAAEWLLRHSPGAARIRLRLRCA 171
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
D T L T ++A Q +VVA G L +V +
Sbjct: 172 AVALDGTTVRLAGGET--LDAAQ-----------VVVANG----------LAAARLVDGV 208
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
++P+KGHLL+ + + + H +E GY+ +H Q S++ A G
Sbjct: 209 ALQPKKGHLLITDRYPG-AITHQLLELGYIK---------SAHHAQGTSVAFNAQPRPTG 258
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
+++GSSRQF + VE ++ R+ RA ++ P L DL S + G R PD
Sbjct: 259 QILIGSSRQFGTTDPAVEMPVLARMLARAQQYLPGLADL------SALRAWTGFRAATPD 312
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVA 473
G P+IGPV V+LATGHEGLG++ +L TAEL+A
Sbjct: 313 GLPLIGPVAERPGVWLATGHEGLGVTTSLATAELIA 348
>gi|163840559|ref|YP_001624964.1| sarcosine oxidase beta subunit [Renibacterium salmoninarum ATCC
33209]
gi|162954035|gb|ABY23550.1| sarcosine oxidase beta subunit [Renibacterium salmoninarum ATCC
33209]
Length = 385
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 187/413 (45%), Gaps = 50/413 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+V +IG GI+G A + LSV VV++ SG + G+G + + + G E+ DL
Sbjct: 9 EVSVIGGGIVGAACAYFAAR-AGLSVTVVEQGAIASGTSSRGEGNLLVSDKEVGHEL-DL 66
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
A S +W R++ + ++ ++ G L++ R+ LK KQ + G+
Sbjct: 67 AKYSQDIW-------RNELAEYAELWEFEPKGGLVVARSESGFASLKTLAKQQRQHGVEV 119
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ LS S+ + EP L E + AAF D+Q+ +L ++ + R +K
Sbjct: 120 QILSPSEAFEREPYLSR-EIAGAAFYAQDAQVQPILVTTHLLRLARQAGAK----VCAGT 174
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
VT LRS + V QT + + ++ ++ AAG W G + + + +PV PR
Sbjct: 175 KVTGFLRSGA--RVCGAQTDRGAIAAEH-VINAAGTWGGEIA------SLAGVHVPVLPR 225
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGH---HDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+G +LV E L + H A YVG D L V G G +
Sbjct: 226 RGFVLVTEPL-PLTVRHKVYAAEYVGDVASSDAGLQTSPVVEGT-----------PAGTI 273
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++G+SR+ AGF+ ++ + + + A +P L + G RPY PD
Sbjct: 274 LIGASRERAGFDNQLSTPGLAALARDAIALFPVLAQ------AKALRTDWGYRPYCPDHV 327
Query: 440 PVIG---PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
PVIG PGL + A GHEG G+ L++GTA+L+ + +D PFA
Sbjct: 328 PVIGYDSRAPGL---WHACGHEGAGIGLSVGTAKLMVQAISGARPDLDLTPFA 377
>gi|254253858|ref|ZP_04947175.1| Glycine/D-amino acid oxidase [Burkholderia dolosa AUO158]
gi|124898503|gb|EAY70346.1| Glycine/D-amino acid oxidase [Burkholderia dolosa AUO158]
Length = 746
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 180/394 (45%), Gaps = 53/394 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A + V VVD GATGAG G+ +V + L
Sbjct: 366 DVVVIGAGIVGAACAHEF-AQRGWRVLVVDD--GSGGATGAGMGH--LVAMDDNAAELAL 420
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW+ ++ + Q ++ G+L + E+ + + + L G+
Sbjct: 421 SHYSIELWRAMSGEM-------PQACAYRNCGTLWLAADAHEMDVARAKQAALAAHGVAG 473
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E + ++ L Q EP L G A +P D L A +A ++ + A + A
Sbjct: 474 ELIDAATLAQLEPMLRAGLGG-ALKIPGDGILYAPVAANWLLQRVPGIALRRDRAVALDG 532
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
P L S TL +++ +VVA G + +L+ +L P++P+
Sbjct: 533 PSVTL-------------ASGATLRAQR-VVVANGVAARTLLPEL----------PLRPK 568
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHLL+ + + +++H +E GY + S++ G L++G
Sbjct: 569 KGHLLITDRYPG-RVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLLIG 618
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + +E ++ R+ +RAA + P+L DL + + G R PDG P++
Sbjct: 619 SSRQFDTEDARIEPPVLARMLRRAAGYLPELADL------NGIRAWTGFRSASPDGLPLL 672
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
G P V+LA GHEGLG+ A G+A LVA ++
Sbjct: 673 GEHPSRPGVWLAVGHEGLGVKTAPGSARLVAALI 706
>gi|395775415|ref|ZP_10455930.1| oxidoreductase [Streptomyces acidiscabies 84-104]
Length = 384
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 176/386 (45%), Gaps = 45/386 (11%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L V VVD+ G TGAG+G + + + PG E+ +LAL S +LW LA ++ G
Sbjct: 30 LDVVVVDRGPVAGGTTGAGEGNLLVSDKEPGPEL-ELALLSARLWTDLA---QEHG---- 81
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
++ G L++ TPE L L E + AG+ A ++SS +L EP L G +
Sbjct: 82 PAYEYEPKGGLVVASTPESLTALTELAEAQRAAGVTATHVSSDELPSLEPYLAPGL-AGG 140
Query: 226 AFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT 285
P D+Q+ LA A++ + + GR VT +LR+ G V V+T +
Sbjct: 141 VLYPQDAQVMPTLATAHLLRASGARVETGRT-------VTEILRAPD-GAVRGVRTDRGD 192
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
L++ A+V AAG W G + + +PV PR+G +LV E ++ H A
Sbjct: 193 LHAP-AVVNAAGTWGGEVA------ALAGVHLPVLPRRGFVLVTEALPR-RIRHKVYAAD 244
Query: 346 YVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKR 405
YV + L S G +++G+SR+ GF+ ++ +
Sbjct: 245 YVAD--------VASDSAALQTSPVVEGTAAGPVLIGASRERVGFDRSFTLPVVRSLAAG 296
Query: 406 AAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGP---VPGLSKVFLATGHEGLGL 462
A +P L + + +G RPY+PD P IG PGL + A GHEG G+
Sbjct: 297 ATRLFPFLAQ------VRAMRTYLGFRPYLPDHLPAIGADLRAPGL---YHACGHEGAGI 347
Query: 463 SLALGTAELVADMVLTNPLKVDSAPF 488
LA GT L+A ++ +D PF
Sbjct: 348 GLATGTGHLLAQLLGGQRPDLDLTPF 373
>gi|257070255|ref|YP_003156510.1| glycine/D-amino acid oxidase, deaminating [Brachybacterium faecium
DSM 4810]
gi|256561073|gb|ACU86920.1| glycine/D-amino acid oxidase, deaminating [Brachybacterium faecium
DSM 4810]
Length = 389
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 178/388 (45%), Gaps = 47/388 (12%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWK-MLADSLRDQGLDP 164
LSV VVD+ P G + +G I + + G E+ DLA S LW LA+ R L+
Sbjct: 33 LSVRVVDRGAPGGGTSSRCEGNILVSDKERGPEL-DLARYSLGLWHGELAEHGRRWELE- 90
Query: 165 LQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSR 224
+ G +++ L L+ + E G+ + L +++L EP E
Sbjct: 91 -------RKGGIIVASRESSLASLRRALAAQREHGIEVQELDAAELASLEP-YASPEAVG 142
Query: 225 AAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE-FYHDPVTCLLRSNSTGEVEAVQTSK 283
AA P DSQ+ ML VA++ ++ R AE H VT +LR V +T++
Sbjct: 143 AALYPDDSQVMPMLVVAHLLA-----LARDRGAEVLEHCEVTGMLREGE--RVVGARTTR 195
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
L A+V AAG W+ L +++P+ PR+G+++V E ++ H
Sbjct: 196 GDL-PAGAVVNAAGPWAAQLA------ALAGVELPIAPRRGYVMVTEPLPP-RVFHKVYA 247
Query: 344 AGY---VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
A Y VG + +L V G G L+LGSSR+ GF+ + + +
Sbjct: 248 AEYIDDVGTSEASLQSSPVVEGT-----------PAGTLLLGSSREQVGFSETLGREALR 296
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
RI AA +P LR++ + G RPY PD P IGP ++ A+GHEG
Sbjct: 297 RIAHNAAALFPFLREVRVLRHYH------GFRPYSPDHVPAIGPDARAPGLWHASGHEGA 350
Query: 461 GLSLALGTAELVADMVLTNPLKVDSAPF 488
G+ L++GT +L+A + + +D +PF
Sbjct: 351 GIGLSVGTGKLLAQALAGDRPDLDLSPF 378
>gi|425734911|ref|ZP_18853227.1| glycine/D-amino acid oxidase, deaminating [Brevibacterium casei
S18]
gi|425480355|gb|EKU47521.1| glycine/D-amino acid oxidase, deaminating [Brevibacterium casei
S18]
Length = 429
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 182/416 (43%), Gaps = 48/416 (11%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T DV++IGAGI+G IA + LSV VV++ +P SG + +G + + + G E+
Sbjct: 15 TSDVLVIGAGIVGSAIA-YYATRAGLSVTVVERGLPASGTSSRCEGNLLVSDKELGPEL- 72
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQLCEA 198
L S LWK D+ W+ G +++ L L
Sbjct: 73 ALTQYSLSLWKGELAEFADR---------WEFEAKGGIIVASRESSLASLDRVTTAQRAF 123
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE 258
G+ A L + L + EP + E AAF P DSQ+ MLA ++ ++ R A
Sbjct: 124 GVEAIPLDPNQLRELEPHITA-EALGAAFYPDDSQVQPMLAAGHLLA-----LAEDRGAR 177
Query: 259 FYHD-PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
D PV LLR+ V V+T + YS IV AAG W+ + +++
Sbjct: 178 LVTDSPVVELLRAGD--RVTGVRTPTGS-YSAGHIVNAAGTWASEIA------AMAGIEL 228
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
V PR+G +LV E + + H A Y+ + + L S G
Sbjct: 229 AVLPRRGFVLVTEPLPPM-IAHKVYAAEYIDNVG--------SSADDLQASPVVEGTPAG 279
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI--GLRPYM 435
+++GSSR+ GF+ V + I + AA +P L D R +R G RPY
Sbjct: 280 TILVGSSRERVGFDERVSSEALGAIARNAAALFPFLSD--------TRILRHYHGFRPYC 331
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
D PVIGP P ++ A GHEG G+ L++GT +L+A + D PFA +
Sbjct: 332 ADHLPVIGPDPRAPGLWHACGHEGAGIGLSVGTGKLLAQAMAGEDADRDLTPFAPE 387
>gi|389685693|ref|ZP_10177017.1| FAD dependent oxidoreductase [Pseudomonas chlororaphis O6]
gi|388551346|gb|EIM14615.1| FAD dependent oxidoreductase [Pseudomonas chlororaphis O6]
Length = 377
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 182/409 (44%), Gaps = 59/409 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IG GI+G A ++ L V V+D GATGAG G++ + P +L
Sbjct: 8 DVLLIGGGIVGAACAHEM-ARRGLRVRVLDNA--SGGATGAGMGHLVAMDDNPA----EL 60
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S LW L L ++ G+L + P E+ + + + L + G+
Sbjct: 61 ALSHYSIGLWNQLRAHLP-------AACAYRNCGTLWLAADPAEMDLARAKQINLAQHGV 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E L S+ L + EP L G A +P D L +A + +
Sbjct: 114 AGELLDSATLAELEPMLRKGLGG-ALKIPGDGIL---------------YAPATAHWLLH 157
Query: 261 HDP-VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
+ P ++C S + V+ + + +V+A G + SL+ +L P+
Sbjct: 158 NTPGISCERARVSAIAAQRVELDDGRVLRAEYVVLANGLAASSLLPEL----------PL 207
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+P+KGHLL+ + + +++H +E GY ++G S++ G L
Sbjct: 208 RPKKGHLLITDRYPR-QVSHQLVELGYAAS-------AHASNGT--SVAFNVQPRPTGQL 257
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++GSSRQF + +E ++ + +RA + P L L + + G R PDG
Sbjct: 258 LIGSSRQFDTLDPAIEPEVLRPMLQRAVAYLPGLAQL------NGIRAWTGFRAATPDGL 311
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++G P + ++LA GHEGLG++ A G+ L+ ++L +D+ +
Sbjct: 312 PILGEHPRYTGLWLAVGHEGLGVTTAPGSGRLLTSLMLGERPDIDAHAY 360
>gi|451334558|ref|ZP_21905133.1| D-amino-acid oxidase [Amycolatopsis azurea DSM 43854]
gi|449422873|gb|EMD28232.1| D-amino-acid oxidase [Amycolatopsis azurea DSM 43854]
Length = 382
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 184/394 (46%), Gaps = 35/394 (8%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLA 143
++++GAGI+G AR+L + V VVD+ P G T G+G I + + PG+E+ +LA
Sbjct: 1 MVVLGAGIVGAACARELSR-AGFDVVVVDRGRPAGGTTSHGEGNILVSDKGPGAEL-ELA 58
Query: 144 LRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAE 203
S LW + + D+ I + G +++ T + L + G+RAE
Sbjct: 59 KLSIGLWPRIVAEIADEDARAASAIEYDPKGGIVVATTDDGARALT--AFAASQRGVRAE 116
Query: 204 YLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
LS +L +AEP L + AAF P D+Q+ A + S R+
Sbjct: 117 PLSLKELAEAEPALT--REVTAAFHYPEDAQVQPAGAALALLG------SALRHGARLRS 168
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
+ S G + V+ + + +V AAG W+G + + I V+PR
Sbjct: 169 DTEVVGASVHKGRIIGVRVPGEVIEAD-VVVNAAGPWAGRV------SALLGAPIAVRPR 221
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
+G +LV + + H +A YVG + G++ + ++ +T G +++G
Sbjct: 222 RGEVLVTTPMPGV-VRHKVYDADYVGAV-------GADSGELQTSAVVEST-WGGTVLIG 272
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSR+ F+ + ++ I +A +P L D+ + + G RPY+ D PV+
Sbjct: 273 SSRRRVDFDDAIRPEVLSAIAVKALRLFPALADVAVM------RAYGGFRPYVDDHLPVL 326
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
G P L ++ ATGHEG G+ L++GTA L+ +++
Sbjct: 327 GADPRLENLWHATGHEGAGIGLSVGTALLLRELL 360
>gi|297203281|ref|ZP_06920678.1| glycine oxidase ThiO [Streptomyces sviceus ATCC 29083]
gi|197711367|gb|EDY55401.1| glycine oxidase ThiO [Streptomyces sviceus ATCC 29083]
Length = 402
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 176/383 (45%), Gaps = 39/383 (10%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L V VVD+ G TGAG+G + + + PG E+ DLAL S +LW LA + D
Sbjct: 30 LDVIVVDRGAVAGGTTGAGEGNLLVSDKEPGPEL-DLALLSGRLWAGLAQEVGD------ 82
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
I ++ G +++ TP+ L L++ AG+ A + + L + EP++ G +
Sbjct: 83 -AIEYELKGGVVVAATPDALEALEKFATGQRAAGVEAVRVDADRLRELEPQVAPGL-AGG 140
Query: 226 AFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT 285
P D+Q+ LA A + + AS R VT +LR + G V V+T +
Sbjct: 141 VLYPQDAQVMPTLAAARLVR-----ASGARLVTGAA--VTEVLR-GAGGAVRGVRTGRGE 192
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
+++ +V AAG W G L + +PV PR+G +LV E L + H A
Sbjct: 193 IHAPH-VVNAAGTWGGELA------ALAGVHLPVLPRRGFVLVTEPLPRL-VRHKVYAAD 244
Query: 346 YVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKR 405
YV + L S G +++G++R+ GF+ + + +
Sbjct: 245 YVAD--------VASDSAALQTSPVVEGTAAGPVLIGATRERVGFDRSLSLPALRALAAG 296
Query: 406 AAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLA 465
A +P L + + + +G RPY+PD P IGP P + +F A GHEG G+ L+
Sbjct: 297 ATRLFPFL------ERVRAMRTYLGFRPYLPDHLPAIGPDPRVPGLFHACGHEGAGIGLS 350
Query: 466 LGTAELVADMVLTNPLKVDSAPF 488
GT +L+A ++ +D PF
Sbjct: 351 TGTGQLIAQVLAGEAPALDLGPF 373
>gi|107100718|ref|ZP_01364636.1| hypothetical protein PaerPA_01001745 [Pseudomonas aeruginosa PACS2]
Length = 371
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 182/416 (43%), Gaps = 66/416 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGI+G A +L L V V+D GAT G G++ + P +L
Sbjct: 4 EVIVVGAGIVGSACAHEL-ARRGLDVLVLDSRR--GGATAVGMGHLVAMDDNPA----EL 56
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S + W+ A L + ++ G+L + EL + + + L AG+
Sbjct: 57 ALSDYSIQAWRAWAADLPED-------CAYRNCGTLWLAADASELAEAERKRQALQAAGV 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
L ++ L EP L G LA A G+ + A +
Sbjct: 110 ACRMLGAARLYALEPALRPG-----------------LAGALEVSGDGILYAP-NAARWL 151
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTL-----YSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
D LR EV V S+ L S +A+V+A G +G E+
Sbjct: 152 LDQAGPRLR-RLYAEVSEVDGSRLRLADGRWLSAEALVLANGIHAG----------ELCA 200
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
++P++P+KGHLL+ + + L H +E GYV + S++ A
Sbjct: 201 ELPIRPKKGHLLITDRYPG-TLRHQLVELGYVS---------SAHASSGTSVAFNAQPRP 250
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G + LGSSRQF + +VE ++ R+ +RA ++ P L L + + G R
Sbjct: 251 TGQVFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGL------NAIRAWTGFRAAT 304
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
PDG P++G P ++LA GHEGLG++ A G+A L+A +L +D+ P+ Q
Sbjct: 305 PDGLPLLGEHPAQPGLWLAVGHEGLGVTTAPGSARLLAAQLLGETPPLDATPYLPQ 360
>gi|443622597|ref|ZP_21107119.1| putative Oxidoreductase [Streptomyces viridochromogenes Tue57]
gi|443343906|gb|ELS58026.1| putative Oxidoreductase [Streptomyces viridochromogenes Tue57]
Length = 383
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 155/356 (43%), Gaps = 39/356 (10%)
Query: 133 RTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERV 192
+ PG E+ DLAL S +LW LA + ++ G +++ +P L L+
Sbjct: 57 KEPGPEL-DLALLSGRLWAELAQEFG-------SAVEYEAKGGVVVASSPGGLAALERFA 108
Query: 193 KQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS 252
+ AG+ AE ++ L + EP L G A P D Q+ LA A++ + AS
Sbjct: 109 EGQRAAGVVAEPVAGDALYELEPHLAPGLPG-AVHYPQDCQVMPALAAAHLIR-----AS 162
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312
R + VT +LR G V V+T + +++ A+V AAG W G L
Sbjct: 163 GARLLTGHT--VTDVLR-GPDGPVRGVRTDRGDIHAP-AVVNAAGTWGGELA------AL 212
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+ +PV PR+G +LV E K+ H A YV + L S
Sbjct: 213 AGVPLPVLPRRGFVLVTEPLPR-KVRHKVYAADYVAD--------VASDSAALQTSPVVE 263
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G +++G+SR+ GF+ ++ + A +P L + + +G R
Sbjct: 264 GTAAGPVLIGASRERVGFDRTFSLPVVRALAAGATRLFPFLEQ------VRALRSYLGFR 317
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PYMPD P +GP P + + A GHEG G+ LA GT L+A + +D PF
Sbjct: 318 PYMPDHLPAVGPDPRVPGLHHACGHEGAGIGLATGTGRLIAQALTGATPDLDLTPF 373
>gi|453066753|gb|EMF07677.1| FAD dependent oxidoreductase [Serratia marcescens VGH107]
Length = 374
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 185/409 (45%), Gaps = 58/409 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI++GAGIIG A +L V+VVD +GAT AG G++ + P +L
Sbjct: 8 DVIVVGAGIIGAACAWRL-AREGYRVSVVDDRR--AGATAAGMGHLVCMDDNPA----EL 60
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S +LW+ + + + W+ G+L + +E+ + +++ +L E G+
Sbjct: 61 ALSAYSLRLWREVTGRMP-------EACAWRGCGTLWLADQADEMAIAEQKRARLAEQGV 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
AE L++ + EP L G + +P D L A LA ++ A G +
Sbjct: 114 AAELLTAEQIAVMEPMLRHGL-AGGLRVPGDGILYAPLAARWL------LADGGAAIDVV 166
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H T L E EAV+ + + +V+A G + SL+ L +
Sbjct: 167 HGEATAL-------EEEAVRLADGRRLAAPVVVLACGLRANSLLPPTL----------LH 209
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGNL 379
+KGHL + + + ++ H +E GY G H S++ G
Sbjct: 210 AKKGHLAITDRYPP-RVRHQLVELGY----------GASAHASNGTSVAFNVQARPTGQW 258
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++GSSRQF ++ ++ ++ + RA F P L + + + GLR DG
Sbjct: 259 LIGSSRQFDAVDSALDMPLLAAMLTRAQHFLPALAQMNII------RCWTGLRAASADGL 312
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++G P S ++LA GHEGLG++ ALG+A L+ + ++D +P+
Sbjct: 313 PLLGVHPRHSWLWLALGHEGLGVTTALGSAALITAQIGRQTPEIDDSPY 361
>gi|161520991|ref|YP_001584418.1| FAD dependent oxidoreductase [Burkholderia multivorans ATCC 17616]
gi|189352829|ref|YP_001948456.1| glycine/D-amino acid oxidase [Burkholderia multivorans ATCC 17616]
gi|160345041|gb|ABX18126.1| FAD dependent oxidoreductase [Burkholderia multivorans ATCC 17616]
gi|189336851|dbj|BAG45920.1| glycine/D-amino acid oxidase [Burkholderia multivorans ATCC 17616]
Length = 375
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 189/410 (46%), Gaps = 61/410 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V VVD GATGAG G+ +V + L
Sbjct: 7 DVVVIGAGIVGAACAHEL-AQRGLRVIVVDDA--SGGATGAGMGH--LVAMDDNAAELAL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW+ L+ + D ++ G+L + E+ + + + L G+
Sbjct: 62 SHYSIELWRALSGDMPDG-------CAYRNCGTLWLAADAHEMDLARAKQATLAAHGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYI-EKGNRHFASKGRYAEFYH 261
E L ++ L + EP L G A +P D L A +A ++ ++G
Sbjct: 115 ELLDAAALARLEPMLRPGLGG-ALKIPGDGILYAPVAANWLLQRGP-------------- 159
Query: 262 DPVTCLLRSNSTGEVEAVQ---TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
+LR + +V+ + S + L +++ +VVA G + +L+ +L P
Sbjct: 160 ---GIVLRRDRAVDVDGARVTLASGDVLRAQR-VVVANGVAARTLLPEL----------P 205
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + ++ H +E GY + S++ G
Sbjct: 206 LRPKKGHLLITDRYPG-RVAHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQ 255
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++GSSRQF + +E ++ R+ +RAA + P L +L + + G R PDG
Sbjct: 256 LLIGSSRQFDTEDPRIEPPVLARMLRRAAGYLPDLAEL------NAIRAWTGFRAASPDG 309
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++G P V+LA GHEGLG++ A G+A L+A + +D P+
Sbjct: 310 LPLLGEHPARPGVWLAVGHEGLGVTTAPGSARLLAAQMAGERPAIDIEPY 359
>gi|221212723|ref|ZP_03585700.1| FAD-dependent oxidoreductase [Burkholderia multivorans CGD1]
gi|221167822|gb|EEE00292.1| FAD-dependent oxidoreductase [Burkholderia multivorans CGD1]
Length = 375
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 186/407 (45%), Gaps = 55/407 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V VVD GATGAG G+ +V + L
Sbjct: 7 DVVVIGAGIVGAACAHEL-AQRGLRVIVVDDA--SGGATGAGMGH--LVAMDDNAAELAL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW+ L+ + D ++ G+L + E+ + + + L G+
Sbjct: 62 SHYSIELWRALSGDMPDG-------CAYRNCGTLWLAADAHEMDLARAKQATLAAHGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYI-EKGNRHFASKGRYAEFYH 261
E L ++ L + EP L G A +P D L A +A ++ ++G + R +
Sbjct: 115 ELLDAAALARLEPMLRPGLGG-ALKIPGDGILYAPVAANWLLQRGPGIVRRRDRAVDVDG 173
Query: 262 DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
VT S + L +++ +VVA G + +L+ +L P++P
Sbjct: 174 ARVTL--------------ASGDVLRAQR-VVVANGVAARTLLPEL----------PLRP 208
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVL 381
+KGHLL+ + + ++ H +E GY + S++ G L++
Sbjct: 209 KKGHLLITDRYPG-RVAHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLLI 258
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
GSSRQF + +E ++ R+ +RAA + P L +L + + G R PDG P+
Sbjct: 259 GSSRQFDTEDPRIEPPVLARMLRRAAGYLPDLAEL------NAIRAWTGFRAASPDGLPL 312
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+G P V+LA GHEGLG++ A G+A L+A + +D P+
Sbjct: 313 LGEHPARPGVWLAVGHEGLGVTTAPGSARLLAAQMAGERPAIDIEPY 359
>gi|383828304|ref|ZP_09983393.1| glycine/D-amino acid oxidase, deaminating [Saccharomonospora
xinjiangensis XJ-54]
gi|383460957|gb|EID53047.1| glycine/D-amino acid oxidase, deaminating [Saccharomonospora
xinjiangensis XJ-54]
Length = 390
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 173/391 (44%), Gaps = 47/391 (12%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
LSV +VD+ P SG + +G+G + + + G E+ +LA S +W RD +
Sbjct: 34 LSVTIVDRGAPASGTSSSGEGNVLISDKELGPEL-ELARYSLDVW-------RDDLAEFA 85
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+ ++ G +++ L L+ V G+ E L + L +AEPE+ A
Sbjct: 86 HLWEFEAKGGIIVASRESSLASLERLVASQRAHGITVERLDGAALREAEPEVTP-HALGA 144
Query: 226 AFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT 285
A+ P D Q+ ML A++ + R + VT LLR + G V V+T+
Sbjct: 145 AYYPDDCQVQPMLVAAHLARMAREHGAD----LVTGATVTGLLRRD--GAVRGVRTTAGD 198
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
L+ A+V AAG W+ + + +PV+PR+G +LV E + H A
Sbjct: 199 LHCG-AVVNAAGPWAAEIA------ALAGVRLPVEPRRGFVLVTEPLPP-TVRHKVYAAE 250
Query: 346 YV---GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRI 402
YV G D L V G G +++GS+R+ GF+ + +
Sbjct: 251 YVDNVGSSDAGLQASAVVEGT-----------PGGTVLIGSTRERVGFDRTPSAEALQVL 299
Query: 403 WKRAAEFYPKLRDLCLADFISNRKVRI--GLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
+ A +P L D+ R +R G RPY PD P IGP P ++ A GHEG
Sbjct: 300 ARNAVALFPFLADV--------RALRHYHGFRPYSPDHLPAIGPDPRAPGLWHACGHEGA 351
Query: 461 GLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
G+ L++GT +L+A + + PFA Q
Sbjct: 352 GIGLSVGTGKLLAAALAGEMTDLRLDPFAPQ 382
>gi|186473482|ref|YP_001860824.1| FAD dependent oxidoreductase [Burkholderia phymatum STM815]
gi|184195814|gb|ACC73778.1| FAD dependent oxidoreductase [Burkholderia phymatum STM815]
Length = 379
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 184/417 (44%), Gaps = 64/417 (15%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T DV+I+GAGI+G A +L LSV V++ GAT AG G+I +++ +P +
Sbjct: 6 TADVVIVGAGIVGAACAAELAA-RGLSVTVLEARGIGGGATAAGMGHIVVMNDSPAE--F 62
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
L+ S LW LA LR + + + G+L + EEL + +
Sbjct: 63 ALSRYSRDLWLELAPQLRTRD-------AFSRCGTLWVAADGEELDAARSMQAAFVAQRV 115
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
AE L L + EP L G M IE + +A
Sbjct: 116 AAELLDERALYEGEPSLAPG----------------MAGGLLIEHDSIVYAPSVAQWLLT 159
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAI-----VVAAGCWSGSLMHDLLRETEIVL 315
P + + V +V + TL + + I VVA G L+ E+V
Sbjct: 160 QSPGAARIDVRADTHVASVDAHQVTLSNGERIGGAHVVVANG----------LQARELVQ 209
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+P++P+KGHLL+ + + + H +E GY+ +H S++ A
Sbjct: 210 GLPLQPKKGHLLITDRYPGF-VRHQLLELGYIK---------SAHHATGTSVAFNAQPRP 259
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G L++GSSRQF ++ V+ ++ R+ +RAA + P L L + + G R
Sbjct: 260 TGQLLVGSSRQFDTTDSAVDMPVLARMLRRAARYLPALPTL------NGIRAWTGFRAAS 313
Query: 436 PDGKPVIGP----VPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P+IGP PG V+LA GHEGLG++ +LGTA+L+A + + PF
Sbjct: 314 PDGMPLIGPAGDAAPG---VWLAVGHEGLGVTTSLGTAQLLAAQITHTEAAIAIDPF 367
>gi|421155241|ref|ZP_15614721.1| hypothetical protein PABE171_4079 [Pseudomonas aeruginosa ATCC
14886]
gi|404520785|gb|EKA31439.1| hypothetical protein PABE171_4079 [Pseudomonas aeruginosa ATCC
14886]
Length = 371
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 181/416 (43%), Gaps = 66/416 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGI+G A +L L V V+D GAT G G++ + P +L
Sbjct: 4 EVIVVGAGIVGSACAHEL-ARRGLDVLVLDSRR--GGATAVGMGHLVAMDDNPA----EL 56
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S + W+ A L + ++ G+L + EL + + + L AG+
Sbjct: 57 ALSDYSIQAWRAWAADLPED-------CAYRNCGTLWLAADASELAEAERKRQALQAAGV 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
L ++ L EP L G LA A G+ + A +
Sbjct: 110 ACRMLGAARLYALEPALRPG-----------------LAGALEVSGDGILYAP-NAARWL 151
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTL-----YSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
D LR EV V S+ L S +A+V+A G +G E+
Sbjct: 152 LDQAGPRLR-RLYAEVSEVDGSRLRLAEGRWLSAEALVLANGIHAG----------ELCA 200
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
++P++P+KGHLL+ + + L H +E GYV + S++ A
Sbjct: 201 ELPIRPKKGHLLITDRYPG-TLRHQLVELGYVS---------SAHASSGTSVAFNAQPRP 250
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G + LGSSRQF + +VE ++ R+ +RA ++ P L L + + G R
Sbjct: 251 TGQIFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGL------NAIRAWTGFRAAT 304
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
PDG P++G P ++LA GHEGLG++ A G+A L+A + +D+ P+ Q
Sbjct: 305 PDGLPLLGEHPAQPGLWLAVGHEGLGVTTAPGSARLLAAQLFGETPPLDATPYLPQ 360
>gi|421472848|ref|ZP_15921013.1| FAD dependent oxidoreductase [Burkholderia multivorans ATCC
BAA-247]
gi|400222264|gb|EJO52659.1| FAD dependent oxidoreductase [Burkholderia multivorans ATCC
BAA-247]
Length = 374
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 182/410 (44%), Gaps = 62/410 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V VVD GATGAG G+ +V + L
Sbjct: 7 DVVVIGAGIVGAACAHEL-AQRGLRVIVVDDA--SGGATGAGMGH--LVAMDDNAAELAL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW+ L+ + D ++ G+L + E+ + + + L G+
Sbjct: 62 SHYSIELWRALSGDMPDG-------CAYRNCGTLWLAADAHEMDLARAKQATLAAHGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E L ++ L + EP L G A +P D L A + ++
Sbjct: 115 ELLDAAALARLEPMLRPGLGG-ALKIPGDGILYAPVTANWL---------------LQRG 158
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAI----VVAAGCWSGSLMHDLLRETEIVLDIP 318
P L R + G V ++ TL S + VVA G + +L+ +L P
Sbjct: 159 PGIVLRRDRAVG----VDGARVTLASGDVLRAQHVVANGVAARTLLPEL----------P 204
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + ++ H +E GY + S++ G
Sbjct: 205 LRPKKGHLLITDRYPG-RVAHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQ 254
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++GSSRQF + +E ++ R+ +RAA + P L +L + + G R PDG
Sbjct: 255 LLIGSSRQFDTEDPRIEPPVLARMLRRAAGYLPDLAEL------NAIRAWTGFRAASPDG 308
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++G P V+LA GHEGLG++ A G+A L+A + +D P+
Sbjct: 309 LPLLGEHPARPGVWLAVGHEGLGVTTAPGSARLLAAQMAGERPAIDIEPY 358
>gi|21224608|ref|NP_630387.1| oxidoreductase [Streptomyces coelicolor A3(2)]
gi|13940328|emb|CAC37891.1| putative secreted oxidoreductase [Streptomyces coelicolor A3(2)]
Length = 389
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 169/381 (44%), Gaps = 37/381 (9%)
Query: 102 VGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQG 161
V + + V V D+ +G T G+G + + + PG E+ LA S LW ++ R+ G
Sbjct: 22 VSAGMDVTVTDRGPVGAGTTSRGEGNVLLSDKAPGPELA-LAHLSRTLWD---EAGRELG 77
Query: 162 LDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGE 221
D L++ + G L++ E L L+E + AG+R E + L EP L G
Sbjct: 78 PDSLEL---EAKGGLVVASGVENLAALREFAARQEAAGVRVEQVDRVRDL--EPHLAPGI 132
Query: 222 DSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT 281
+ P D+Q+ +LA A + + ++ +H + G V V+T
Sbjct: 133 PGGVHY-PQDAQVQPVLAAAALLRAAVRRGAR------FHPGEVAGAVTGRDGRVTGVRT 185
Query: 282 SKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHAS 341
+ + A+V AAG W G + L E++ PR+G +LV E + + H
Sbjct: 186 AAGDVLPADAVVNAAGTWGGEVGRRLGAPVEVL------PRRGFVLVTEPLPPM-VRHKV 238
Query: 342 MEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDR 401
A YV + + L S G +++G+SR+ GF+T + ++ R
Sbjct: 239 YSADYVAN--------VASSDAGLETSCVVEGTRGGTILIGASRERVGFDTTMNTAVVAR 290
Query: 402 IWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLG 461
+ +A +P LR + L R R G RPY PD PV+GP P + V A GHEG G
Sbjct: 291 LAAQACRLFPFLRGVHLM-----RAYR-GFRPYCPDHLPVVGPDPRVPGVVHACGHEGAG 344
Query: 462 LSLALGTAELVADMVLTNPLK 482
+ LA T LV +L P +
Sbjct: 345 IGLAPATGALVTAHLLGRPWR 365
>gi|392985250|ref|YP_006483837.1| hypothetical protein PADK2_19310 [Pseudomonas aeruginosa DK2]
gi|419754633|ref|ZP_14280992.1| hypothetical protein CF510_16593 [Pseudomonas aeruginosa
PADK2_CF510]
gi|384398965|gb|EIE45369.1| hypothetical protein CF510_16593 [Pseudomonas aeruginosa
PADK2_CF510]
gi|392320755|gb|AFM66135.1| hypothetical protein PADK2_19310 [Pseudomonas aeruginosa DK2]
Length = 371
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 181/416 (43%), Gaps = 66/416 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGI+G A +L L V V+D GAT G G++ + P +L
Sbjct: 4 EVIVVGAGIVGSACAHEL-ARRGLDVLVLDSRR--GGATAVGMGHLVAMDDNPA----EL 56
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S + W+ A L + ++ G+L + EL + + + L AG+
Sbjct: 57 ALSDYSIQAWRAWAADLPED-------CAYRNCGTLWLAADASELAEAERKRQALQAAGV 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
L ++ L EP L G LA A G+ + A +
Sbjct: 110 ACRMLGAARLYALEPALRPG-----------------LAGALEVSGDGILYAP-NAARWL 151
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTL-----YSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
D LR EV V S+ L S +A+V+A G +G E+
Sbjct: 152 LDQAGPRLR-RLYAEVSEVDGSRLRLADGRWLSAEALVLANGIHAG----------ELCA 200
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
++P++P+KGHLL+ + + L H +E GYV + S++ A
Sbjct: 201 ELPIRPKKGHLLITDRYPG-TLRHQLVELGYVS---------SAHASSGTSVAFNAQPRP 250
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G + LGSSRQF + +VE ++ R+ +RA ++ P L L + + G R
Sbjct: 251 TGQVFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGL------NAIRAWTGFRAAT 304
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
PDG P++G P ++LA GHEGLG++ A G+A L+A + +D+ P+ Q
Sbjct: 305 PDGLPLLGEHPAQPGLWLAVGHEGLGVTTAPGSARLLAAQLFGETPPLDATPYLPQ 360
>gi|402556955|ref|YP_006598226.1| glycine oxidase [Bacillus cereus FRI-35]
gi|401798165|gb|AFQ12024.1| glycine oxidase, putative [Bacillus cereus FRI-35]
Length = 391
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 175/381 (45%), Gaps = 52/381 (13%)
Query: 107 SVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQ 166
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 28 DVTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------H 79
Query: 167 VIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGED 222
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 80 SFEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLE 139
Query: 223 SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS 282
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 140 CAT-----DSTVNPYLLAFALLAESKKFGTKA----FNHTEVKEMKRDIDGSFI--VETT 188
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
T ++ K +V AAG W+ + L ++IP++PRKGH++V + M
Sbjct: 189 NGT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-M 240
Query: 343 EAGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
E GY+ ++ GQ +G L T + N ++GSSR+F GF+T +
Sbjct: 241 EFGYL----ISKFGGQRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRIN 292
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A
Sbjct: 293 NDVIKCIANRAIRFYPKMVDMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAA 346
Query: 456 GHEGLGLSLALGTAELVADMV 476
GHEG G+SLA T +++ +++
Sbjct: 347 GHEGDGISLAAVTGKVIEELL 367
>gi|15596464|ref|NP_249958.1| hypothetical protein PA1267 [Pseudomonas aeruginosa PAO1]
gi|418588528|ref|ZP_13152536.1| hypothetical protein O1O_27531 [Pseudomonas aeruginosa MPAO1/P1]
gi|418594838|ref|ZP_13158590.1| hypothetical protein O1Q_28868 [Pseudomonas aeruginosa MPAO1/P2]
gi|421515898|ref|ZP_15962584.1| hypothetical protein A161_06495 [Pseudomonas aeruginosa PAO579]
gi|9947200|gb|AAG04656.1|AE004556_6 hypothetical protein PA1267 [Pseudomonas aeruginosa PAO1]
gi|375040614|gb|EHS33361.1| hypothetical protein O1O_27531 [Pseudomonas aeruginosa MPAO1/P1]
gi|375041812|gb|EHS34490.1| hypothetical protein O1Q_28868 [Pseudomonas aeruginosa MPAO1/P2]
gi|404349626|gb|EJZ75963.1| hypothetical protein A161_06495 [Pseudomonas aeruginosa PAO579]
Length = 371
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 180/416 (43%), Gaps = 66/416 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGI+G A +L L V V+D GAT G G++ + P +L
Sbjct: 4 EVIVVGAGIVGSACAHEL-ARRGLDVLVLDSRR--GGATAVGMGHLVAMDDNPA----EL 56
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S + W+ A L + ++ G+L + EL + + + L AG+
Sbjct: 57 ALSDYSTQAWRAWAAELPED-------CAYRGCGTLWLAADASELAEAERKRQALQAAGV 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
L ++ L EP L G LA A G+ + A +
Sbjct: 110 ACRMLGAARLYALEPALRPG-----------------LAGALEVSGDGILYAP-NAARWL 151
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTL-----YSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
D LR EV V S+ L S +A+V+A G +G E+
Sbjct: 152 LDQAGPRLR-RLYAEVSEVDGSRLRLADGRWLSAEALVLANGIHAG----------ELCA 200
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
++P++P+KGHLL+ + + L H +E GYV + S++ A
Sbjct: 201 ELPIRPKKGHLLITDRYPG-TLRHQLVELGYVS---------SAHASSGTSVAFNAQPRP 250
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G + LGSSRQF + +VE ++ R+ +RA ++ P L L + + G R
Sbjct: 251 TGQVFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGL------NAIRAWTGFRAAT 304
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
PDG P++G P ++LA GHEGLG++ A G+A L+A + +D P+ Q
Sbjct: 305 PDGLPLLGEHPAQPGLWLAVGHEGLGVTTAPGSARLLAAQLFGETPPLDPTPYLPQ 360
>gi|229197009|ref|ZP_04323747.1| Sarcosine oxidase, beta subunit [Bacillus cereus m1293]
gi|228586429|gb|EEK44509.1| Sarcosine oxidase, beta subunit [Bacillus cereus m1293]
Length = 391
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 172/376 (45%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESEEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDKEGSFI--VETTNGT-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DINIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ GQ +G L T + N ++GSSR+F GF+T + +I
Sbjct: 246 ----ISKFGGQRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|420254783|ref|ZP_14757764.1| glycine/D-amino acid oxidase, deaminating [Burkholderia sp. BT03]
gi|398047723|gb|EJL40234.1| glycine/D-amino acid oxidase, deaminating [Burkholderia sp. BT03]
Length = 375
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 180/394 (45%), Gaps = 50/394 (12%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T DV+I+GAGI+G A +L L V V+D GAT AG G+I +++ +P +
Sbjct: 2 TADVVIVGAGIVGAACAAELAA-RGLRVTVLDAQGIGGGATAAGMGHIVVMNDSPAE--F 58
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
L+ S LW LA LR + + + G+L + EEL +E +
Sbjct: 59 ALSRYSRDLWLELAPQLRTRD-------AFARCGTLWVASDAEELDAAREMHAGFVAQDV 111
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
A+ L L EP L G + + +DS + A A ++ + A
Sbjct: 112 AAQLLDEHALYDCEPSLAAGM-AGGLLIGHDSIVYAPSAAQWLLTQSPGAAR-------- 162
Query: 261 HDPVTCLLRSNSTG-EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
+ L + + + + V S IVVA G L+ E+V +P+
Sbjct: 163 ---IDVRLHAQAVAVDAQHVTLSNGERVGGAHIVVANG----------LQARELVRGLPL 209
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+P+KGHLL+ + + + H +E GY+ +H S++ A G L
Sbjct: 210 QPKKGHLLITDRYPGF-IRHQLLELGYI---------KSAHHATGTSVAFNAQPRPTGQL 259
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++GSSRQF + VE ++ R+ +RAA + P L L + + G R PDG
Sbjct: 260 LIGSSRQFDTTDAAVEMPVLARMLQRAARYLPALPTL------NGIRAWTGFRAASPDGL 313
Query: 440 PVIGPVPGLSK-VFLATGHEGLGLSLALGTAELV 472
P+IGP G + V+LA GHEGLG++ +LGTA+L+
Sbjct: 314 PLIGPAGGTAPGVWLAVGHEGLGVTTSLGTAQLL 347
>gi|386065090|ref|YP_005980394.1| hypothetical protein NCGM2_2150 [Pseudomonas aeruginosa NCGM2.S1]
gi|348033649|dbj|BAK89009.1| hypothetical protein NCGM2_2150 [Pseudomonas aeruginosa NCGM2.S1]
Length = 371
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 180/416 (43%), Gaps = 66/416 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGI+G A +L L V V+D GAT G G++ + P +L
Sbjct: 4 EVIVVGAGIVGSACAHEL-ARRGLDVLVLDSRR--GGATAVGMGHLVAMDDNPA----EL 56
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL + W+ A L + ++ G+L + EL + + + L AG+
Sbjct: 57 ALSDYSIQGWRAWAADLPED-------CAYRNCGTLWLAADASELAEAERKRQALQAAGV 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
L ++ L EP L G LA A G+ + A +
Sbjct: 110 ACRMLGAARLYALEPALRPG-----------------LAGALEVSGDGILYAP-NAARWL 151
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTL-----YSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
D LR EV V S+ L S +A+V+A G +G E+
Sbjct: 152 LDQAGPRLR-RLYAEVSEVDGSRLRLADGRWLSAEALVLANGIHAG----------ELCA 200
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
++P++P+KGHLL+ + + L H +E GYV + S++ A
Sbjct: 201 ELPIRPKKGHLLITDRYPG-TLRHQLVELGYVS---------SAHASSGTSVAFNAQPRP 250
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G + LGSSRQF + +VE ++ R+ +RA ++ P L L + + G R
Sbjct: 251 TGQIFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGL------NAIRAWTGFRAAT 304
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
PDG P++G P ++LA GHEGLG++ A G+A L+A + +D+ P+ Q
Sbjct: 305 PDGLPLLGEHPAQPGLWLAVGHEGLGVTTAPGSARLLAAQLFGETPPLDTTPYLPQ 360
>gi|385785512|ref|YP_005816621.1| Putative oxidoreductase [Erwinia sp. Ejp617]
gi|310764784|gb|ADP09734.1| Putative oxidoreductase [Erwinia sp. Ejp617]
Length = 368
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 173/388 (44%), Gaps = 53/388 (13%)
Query: 101 LVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160
L + L V ++D +P AT AG G++ ++ P DL S K WK ++ +L
Sbjct: 25 LANAGLKVMLIDAGLP--NATSAGMGHLLILDDNPAER--DLTRYSLKRWKEISHALP-- 78
Query: 161 GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVG 220
+ +++ G+L + EE+ + +E+ L + G + L + + QAEP + G
Sbjct: 79 -----EAAAYRRNGTLWMAANEEEMAVAEEKYHLLRQLGEECDLLKAEQVTQAEPAIRHG 133
Query: 221 EDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQ 280
+ D L A + ++ R GR + ++P L
Sbjct: 134 LKG-GLLVKDDGILYAPVVAQWMSDHPRIKKVHGRVVDI-NEPYVVL------------- 178
Query: 281 TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHA 340
Y IV+A G ++ +E++ ++P+ P+KGHLL+ + + +
Sbjct: 179 -DDGRQYQAGHIVLANG----------IQASELLAELPLVPKKGHLLITDRYPH-GITRT 226
Query: 341 SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
+E GYV + +H S + G L++GS+RQF + VE ++
Sbjct: 227 LVELGYV---------TRAHHATGPSAACNIQPRPTGQLLVGSTRQFDSVDPAVEPWMLS 277
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
++ +RA E+ P L+D+ + + G R PDG P+IG PG ++LA GHEGL
Sbjct: 278 KMVRRACEYVPALKDM------NAIRTWTGFRATSPDGLPLIGRHPGRCGLWLAVGHEGL 331
Query: 461 GLSLALGTAELVADMVLTNPLKVDSAPF 488
G++ A TA+L+ + ++D+ +
Sbjct: 332 GVTTATATADLIKADIFQQHHQLDAGAY 359
>gi|222096334|ref|YP_002530391.1| sarcosine oxidase subunit beta [Bacillus cereus Q1]
gi|221240392|gb|ACM13102.1| sarcosine oxidase, beta subunit [Bacillus cereus Q1]
Length = 391
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 173/376 (46%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMRRDKEGSFI--VETTNGT-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ GQ +G L T + N ++GSSR+F GF+T++ +I
Sbjct: 246 ----ISKFGGQRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|289768074|ref|ZP_06527452.1| secreted oxidoreductase [Streptomyces lividans TK24]
gi|289698273|gb|EFD65702.1| secreted oxidoreductase [Streptomyces lividans TK24]
Length = 389
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 169/381 (44%), Gaps = 37/381 (9%)
Query: 102 VGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQG 161
V + + V V D+ +G T G+G + + + PG E+ LA S LW ++ R+ G
Sbjct: 22 VSAGMDVTVTDRGPVGAGTTSRGEGNVLLSDKAPGPELA-LAHLSRTLWD---EAGRELG 77
Query: 162 LDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGE 221
D L++ + G L++ E L L+E + AG+R E + L EP L G
Sbjct: 78 PDSLEL---EAKGGLVVASGVENLAALQEFAARQEAAGVRVEQVDRVRDL--EPHLAPGI 132
Query: 222 DSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT 281
+ P D+Q+ +LA A + + ++ +H + G V V+T
Sbjct: 133 PGGVHY-PQDAQVQPVLAAAALLRAAVRRGAR------FHPGEVAGAVTGRDGRVTGVRT 185
Query: 282 SKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHAS 341
+ + A+V AAG W G + L E++ PR+G +LV E + + H
Sbjct: 186 AAGDVLPADAVVNAAGTWGGEVGRRLGAAVEVL------PRRGFVLVTEPLPPM-VRHKV 238
Query: 342 MEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDR 401
A YV + + L S G +++G+SR+ GF+T + ++ R
Sbjct: 239 YSADYVAN--------VASSDAGLETSCVVEGTRGGTILIGASRERVGFDTTMNTAVVAR 290
Query: 402 IWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLG 461
+ +A +P LR + L R R G RPY PD PV+GP P + V A GHEG G
Sbjct: 291 LAAQACRLFPFLRGVHLM-----RAYR-GFRPYCPDHLPVVGPDPRVPGVVHACGHEGAG 344
Query: 462 LSLALGTAELVADMVLTNPLK 482
+ LA T LV +L P +
Sbjct: 345 IGLAPATGALVTAHLLGRPWR 365
>gi|206974004|ref|ZP_03234922.1| putative glycine oxidase [Bacillus cereus H3081.97]
gi|217960276|ref|YP_002338836.1| putative glycine oxidase [Bacillus cereus AH187]
gi|229139473|ref|ZP_04268044.1| Sarcosine oxidase, beta subunit [Bacillus cereus BDRD-ST26]
gi|375284791|ref|YP_005105230.1| glycine oxidase [Bacillus cereus NC7401]
gi|423352581|ref|ZP_17330208.1| hypothetical protein IAU_00657 [Bacillus cereus IS075]
gi|423372720|ref|ZP_17350060.1| hypothetical protein IC5_01776 [Bacillus cereus AND1407]
gi|423568308|ref|ZP_17544555.1| hypothetical protein II7_01531 [Bacillus cereus MSX-A12]
gi|423605464|ref|ZP_17581357.1| hypothetical protein IIK_02045 [Bacillus cereus VD102]
gi|206748160|gb|EDZ59549.1| putative glycine oxidase [Bacillus cereus H3081.97]
gi|217064918|gb|ACJ79168.1| putative glycine oxidase [Bacillus cereus AH187]
gi|228644020|gb|EEL00281.1| Sarcosine oxidase, beta subunit [Bacillus cereus BDRD-ST26]
gi|358353318|dbj|BAL18490.1| glycine oxidase, putative [Bacillus cereus NC7401]
gi|401091680|gb|EJP99820.1| hypothetical protein IAU_00657 [Bacillus cereus IS075]
gi|401099157|gb|EJQ07167.1| hypothetical protein IC5_01776 [Bacillus cereus AND1407]
gi|401210596|gb|EJR17347.1| hypothetical protein II7_01531 [Bacillus cereus MSX-A12]
gi|401242819|gb|EJR49190.1| hypothetical protein IIK_02045 [Bacillus cereus VD102]
Length = 391
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 173/376 (46%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDKDGSFI--VETTNGT-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ GQ +G L T + N ++GSSR+F GF+T++ +I
Sbjct: 246 ----ISKFGGQRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|423575520|ref|ZP_17551639.1| hypothetical protein II9_02741 [Bacillus cereus MSX-D12]
gi|401208845|gb|EJR15605.1| hypothetical protein II9_02741 [Bacillus cereus MSX-D12]
Length = 391
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 172/376 (45%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDKEGSFI--VETTNGT-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DINIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ GQ +G L T + N ++GSSR+F GF+T + +I
Sbjct: 246 ----ISKFGGQRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|365104133|ref|ZP_09333794.1| hypothetical protein HMPREF9428_02875 [Citrobacter freundii
4_7_47CFAA]
gi|363644746|gb|EHL84027.1| hypothetical protein HMPREF9428_02875 [Citrobacter freundii
4_7_47CFAA]
Length = 367
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 181/402 (45%), Gaps = 69/402 (17%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG A QL V ++D +GAT AG G++ + P +L
Sbjct: 5 DVIVIGAGIIGAACAWQL-AARGQRVTLIDD--GNAGATAAGMGHLVCMDDDPA----EL 57
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL + L W+ L + + W+ G+L + T +EL + +E+ +++ +
Sbjct: 58 ALSAWSLESWRKLTPRMPES-------CAWRGCGTLWLAETRQELALAEEKQQRMARYQV 110
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
+E + L EP L G + ++P D + Y R F + A+
Sbjct: 111 VSEMQTRDRLAAREPLLTAGL-AGGLWVPGDG-------IVYAPNVARWFIND---ADLT 159
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKK-----AIVVAAGCWSGSLMHDLLRETEIVL 315
H LR ++ +V TL+S K AIV+A+G + +L+ +
Sbjct: 160 H------LRDSAL----SVDAPYVTLHSGKRLRAPAIVIASGLGANTLLGENW------- 202
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
++P+KG L + + + L L+H +E GY G H S++
Sbjct: 203 ---LRPKKGQLAITDRYGPL-LSHQLVELGY----------GASAHAGGTSLAFNIQPRP 248
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G L++GSSRQF + EV+ ++ ++ RA F P L L + S G R
Sbjct: 249 TGQLLIGSSRQFDNTDREVDLPLLAQMLARARHFLPSLEALNIIRCWS------GFRAAS 302
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
DG P+IGP P ++LA GHEGLG++ A TAEL+ +L
Sbjct: 303 ADGNPLIGPHPARPGIWLALGHEGLGVTTAPATAELLCAQIL 344
>gi|384180722|ref|YP_005566484.1| sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324326806|gb|ADY22066.1| sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 391
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 173/376 (46%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE G+
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFAGDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ F +K F H V + R + ++T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKDMKRDIDGSFI--IETTNGT-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQLVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ G+ +G L T + N ++GSSR+F GF+T + +I
Sbjct: 246 ----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|423523301|ref|ZP_17499774.1| hypothetical protein IGC_02684 [Bacillus cereus HuA4-10]
gi|401171543|gb|EJQ78769.1| hypothetical protein IGC_02684 [Bacillus cereus HuA4-10]
Length = 391
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 175/380 (46%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + + F +K F H V + R + V+T+K
Sbjct: 141 AT-----DSTVNPYLLAFSLLAEAKKFGAKA----FNHTEVKEMKRDLDGSFI--VETTK 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T +
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|229030516|ref|ZP_04186552.1| Sarcosine oxidase, beta subunit [Bacillus cereus AH1271]
gi|228730783|gb|EEL81727.1| Sarcosine oxidase, beta subunit [Bacillus cereus AH1271]
Length = 403
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 175/380 (46%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 41 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 92
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + E GL L D+ + P +L+ G +
Sbjct: 93 FEYRAPGSILVCESDEEMEAAQQWVNRQKEVGLPFRMLDRQDIREESPFFADDLLGGLEC 152
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 153 AT-----DSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKEMKRDTDGSFI--VETTN 201
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T +S K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 202 GT-FSAKQVVNAAGVWAPKIGEML------NVNIPIEPRKGHIIVASRQQHVGCRKV-ME 253
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T++
Sbjct: 254 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINN 305
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 306 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 359
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 360 HEGDGISLAAVTGKVIEELL 379
>gi|423390925|ref|ZP_17368151.1| hypothetical protein ICG_02773 [Bacillus cereus BAG1X1-3]
gi|401636758|gb|EJS54511.1| hypothetical protein ICG_02773 [Bacillus cereus BAG1X1-3]
Length = 391
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 175/380 (46%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDQQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKEMKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T +
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|345889368|ref|ZP_08840378.1| hypothetical protein HMPREF0178_03152, partial [Bilophila sp.
4_1_30]
gi|345039680|gb|EGW43997.1| hypothetical protein HMPREF0178_03152 [Bilophila sp. 4_1_30]
Length = 355
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 22/292 (7%)
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE 258
G+ + +LL+ EP + D A L ++ DA L + G A +
Sbjct: 73 GVDVTFWDRDELLRHEPHV---SDKVIACLNFNG--DAKLNPMRLCFGLAELARQKGAKA 127
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
F VT + N G V++V+TS ++ +KK +V+A+G W+ L D+ + + +P
Sbjct: 128 FNRTAVTGITVRN--GAVQSVETSSGSIATKK-VVLASGVWTPGL-GDM-----VGVKVP 178
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++PR+G +LV E + L ++ E GY+ PG + ++M G
Sbjct: 179 IRPRQGQILVTERLDGL-VSKNYAEFGYLAAKSGKKRPGVTPEMEQFGVAMVLEPSAAGT 237
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+++GSSR+F G +T ++ I +RA F+P + L + G+RP PDG
Sbjct: 238 VLIGSSRRFVGMDTTPHPAVMQAIAQRAKHFFPSFSGVKLI------RAYAGVRPASPDG 291
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
KP+I P + V++A GHEG G+ L+L T +LV+ M+ VD AP +
Sbjct: 292 KPIISPT-HVEGVYVAAGHEGNGIGLSLITGKLVSQMLRGETPLVDLAPLCI 342
>gi|317485654|ref|ZP_07944526.1| FAD dependent oxidoreductase [Bilophila wadsworthia 3_1_6]
gi|316923088|gb|EFV44302.1| FAD dependent oxidoreductase [Bilophila wadsworthia 3_1_6]
Length = 397
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 142/293 (48%), Gaps = 22/293 (7%)
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE 258
G+ + +LL+ EP + D A L ++ DA L + G A +
Sbjct: 115 GVDVTFWDRDELLRHEPHV---SDKVIACLNFNG--DAKLNPMRLCFGLAELARQKGAKA 169
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
F VT + N G V++V+TS ++ +KK +V+A+G W+ L D+ + + +P
Sbjct: 170 FNRTAVTGITVRN--GAVQSVETSSGSIATKK-VVLASGVWTPGL-GDM-----VGVKVP 220
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++PR+G +LV E + L ++ E GY+ PG + ++M G
Sbjct: 221 IRPRQGQILVTERLDGL-VSKNYAEFGYLAAKSGKKRPGVTPEMEQFGVAMVLEPSAAGT 279
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+++GSSR+F G +T ++ I +RA F+P + L + G+RP PDG
Sbjct: 280 VLIGSSRRFVGMDTTPHPAVMQAIAQRAKHFFPSFSGVKLI------RAYAGVRPASPDG 333
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
KP+I P + V++A GHEG G+ L+L T +LV+ M+ VD AP +
Sbjct: 334 KPIISPT-HVEGVYVAAGHEGNGIGLSLITGKLVSQMLRGETPLVDLAPLCID 385
>gi|254239641|ref|ZP_04932963.1| hypothetical protein PA2G_00261 [Pseudomonas aeruginosa 2192]
gi|126193019|gb|EAZ57082.1| hypothetical protein PA2G_00261 [Pseudomonas aeruginosa 2192]
Length = 371
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 181/416 (43%), Gaps = 66/416 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGI+G A +L L V V+D GAT G G++ + P +L
Sbjct: 4 EVIVVGAGIVGSACAHEL-ARRGLDVLVLDSRR--GGATAVGMGHLVAMDDNPA----EL 56
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S + W+ A L + ++ G+L + EL + + + L AG+
Sbjct: 57 ALSDYSIQAWRAWAADLPED-------CAYRNCGTLWLAADASELAEAERKRQALQAAGV 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
L ++ L EP L G LA A G+ + A +
Sbjct: 110 ACRMLGAARLYALEPALRPG-----------------LAGALEVSGDGILYAP-NAARWL 151
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTL-----YSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
D LR EV V S+ L S +A+V+A G +G E+
Sbjct: 152 LDQAGPRLR-RLYAEVSEVDGSRLRLADGRWLSAEALVLANGIHAG----------ELCA 200
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
++P++P+KGHLL+ + + L H +E GYV + S++ A
Sbjct: 201 ELPIRPKKGHLLITDRYLG-TLRHQLVELGYVS---------SAHASSGTSVAFNAQPRP 250
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G + LGSSRQF + +VE ++ R+ +RA ++ P L L + + G R
Sbjct: 251 TGQVFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGL------NAIRAWTGFRAAT 304
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
PDG P++G P ++LA GHEGLG++ A G+A L+A + +D+ P+ Q
Sbjct: 305 PDGLPLLGEHPAQPGLWLAVGHEGLGVTTAPGSARLLAAQLFGETPPLDATPYLPQ 360
>gi|229018148|ref|ZP_04175021.1| Sarcosine oxidase, beta subunit [Bacillus cereus AH1273]
gi|229024328|ref|ZP_04180785.1| Sarcosine oxidase, beta subunit [Bacillus cereus AH1272]
gi|228736977|gb|EEL87515.1| Sarcosine oxidase, beta subunit [Bacillus cereus AH1272]
gi|228743073|gb|EEL93200.1| Sarcosine oxidase, beta subunit [Bacillus cereus AH1273]
Length = 391
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 175/380 (46%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKEMKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T +
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|229173487|ref|ZP_04301030.1| Sarcosine oxidase, beta subunit [Bacillus cereus MM3]
gi|228609869|gb|EEK67148.1| Sarcosine oxidase, beta subunit [Bacillus cereus MM3]
Length = 391
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 172/377 (45%), Gaps = 46/377 (12%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + E GL L D+ + P ED
Sbjct: 81 FEYRAPGSILVCESEEEMEAAQQWVNRQKEVGLPFRMLDRQDIREESP--FFAEDLLGGL 138
Query: 228 -LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTL 286
DS ++ L + ++ F +K F H V + R + V+T+ T
Sbjct: 139 ECATDSTVNPYLLAFSLLTESKKFGTKA----FNHTEVKEMKRDIDGSFI--VETTNGT- 191
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
++ K +V AAG W+ + L ++IP++PRKGH++V + ME GY
Sbjct: 192 FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGY 244
Query: 347 VGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTII 399
+ ++ G+ +G L T + N ++GSSR+F GF+T++ +I
Sbjct: 245 L----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNEVI 296
Query: 400 DRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEG 459
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 297 KCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEG 350
Query: 460 LGLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 351 DGISLAAVTGKVIEELL 367
>gi|448241559|ref|YP_007405612.1| FAD dependent oxidoreductase [Serratia marcescens WW4]
gi|445211923|gb|AGE17593.1| FAD dependent oxidoreductase [Serratia marcescens WW4]
Length = 374
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 184/409 (44%), Gaps = 58/409 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI++GAGIIG A +L V+VVD +GAT AG G++ + P +L
Sbjct: 8 DVIVVGAGIIGAACAWRL-AREGYRVSVVDDRR--AGATAAGMGHLVCMDDNPA----EL 60
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S +LW+ + + + W+ G+L + +E+ + +++ +L E G+
Sbjct: 61 ALSAYSLRLWREVTGRMP-------ETCAWRGCGTLWLADQADEMAIAEQKRARLAEQGV 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
AE L++ + EP L G + +P D L A LA ++ A +G +
Sbjct: 114 AAELLTAEQIAVMEPMLRHGL-AGGLRVPGDGILYAPLAARWL------LADRGAAIDVV 166
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H T L E EAV+ + + +V+A G + SL+ L +
Sbjct: 167 HGEATAL-------EEEAVRLADGRRLAAPVVVLACGLRANSLLPQTL----------LH 209
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGNL 379
+KG L + + + ++ H +E GY G H S++ G
Sbjct: 210 AKKGQLAITDRYPP-RVRHQLVELGY----------GASAHASNGTSVAFNVQARPTGQW 258
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++GSSRQF ++ ++ ++ + RA F P L + + + GLR DG
Sbjct: 259 LIGSSRQFDAVDSALDMPLLAAMLTRAQHFLPALAQMNII------RCWTGLRAASADGL 312
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++G P S ++LA GHEGLG + ALG+A L+ + ++D +P+
Sbjct: 313 PLLGVHPRHSWLWLALGHEGLGATTALGSAALITAQIGRQTPEIDDSPY 361
>gi|452077435|gb|AGF93395.1| FAD dependent oxidoreductase [uncultured organism]
Length = 254
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 120/228 (52%), Gaps = 24/228 (10%)
Query: 256 YAEFYHDPVTCLLRSNST-------GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLL 308
+A C++R+ S GE+ AV+T K + ++K ++ AG W+ +
Sbjct: 21 FAHHAQKQGACIIRNTSVEDIEIKKGEIRAVKTEKGKIAAEK-VINTAGAWAPKI----- 74
Query: 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSIS 368
+DIP+KPR+G LLV E L + ++A Y+ + +P + G+ + +
Sbjct: 75 -SKMAGIDIPIKPRRGQLLVSEEMPEL-IKGTLLDAKYI-TSKYSTNP-ENKEGE-MGVG 129
Query: 369 MTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR 428
++ T GNL++G RQF+G+N I K A + P L+++ + +
Sbjct: 130 LSLTQTQAGNLLIGGCRQFSGYNKSTSYYAFQAIMKNAVKMIPFLKEINIIRSFA----- 184
Query: 429 IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
GLRPY PDGKP++G VPG+ +++A GHEG G++LA T ++++ ++
Sbjct: 185 -GLRPYTPDGKPILGKVPGIKGLYIAAGHEGDGIALAPVTGKIISQII 231
>gi|423469105|ref|ZP_17445849.1| hypothetical protein IEM_00411 [Bacillus cereus BAG6O-2]
gi|402440456|gb|EJV72449.1| hypothetical protein IEM_00411 [Bacillus cereus BAG6O-2]
Length = 391
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 175/380 (46%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIKEESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKEMKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T +
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|229167341|ref|ZP_04295079.1| Sarcosine oxidase, beta subunit [Bacillus cereus AH621]
gi|423593248|ref|ZP_17569279.1| hypothetical protein IIG_02116 [Bacillus cereus VD048]
gi|228615903|gb|EEK72990.1| Sarcosine oxidase, beta subunit [Bacillus cereus AH621]
gi|401228157|gb|EJR34682.1| hypothetical protein IIG_02116 [Bacillus cereus VD048]
Length = 391
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 175/380 (46%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIKEESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKEIKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T +
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|423453777|ref|ZP_17430630.1| hypothetical protein IEE_02521 [Bacillus cereus BAG5X1-1]
gi|401137459|gb|EJQ45040.1| hypothetical protein IEE_02521 [Bacillus cereus BAG5X1-1]
Length = 391
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 175/380 (46%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIKEESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKEIKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T +
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISGVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|345297719|ref|YP_004827077.1| FAD dependent oxidoreductase [Enterobacter asburiae LF7a]
gi|345091656|gb|AEN63292.1| FAD dependent oxidoreductase [Enterobacter asburiae LF7a]
Length = 367
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 174/403 (43%), Gaps = 71/403 (17%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGS---EI 139
DVI+IGAGIIG A QL V +VD +GAT AG G++ + P
Sbjct: 5 DVIVIGAGIIGAACAWQL-AKRGQRVTLVDD--GNAGATAAGMGHLVCMDDDPAELTLST 61
Query: 140 WDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
W LA W+ L + + W+ G+L + TP+EL + +E+ +++ +
Sbjct: 62 WSLAR-----WRELTPHMPES-------CAWRGCGTLWLAETPQELALAEEKQQRMAQYQ 109
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
+ A L + D L A L+ S ++P D + Y R F
Sbjct: 110 V-ASDLQTRDQLAAREPLLTSRLSGGLWVPGD-------GIVYAPNVTRWF--------- 152
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKK-----AIVVAAGCWSGSLMHDLLRETEIV 314
D LR + EV+A TL+S K AIV+A G + L+ +
Sbjct: 153 IEDAGVTHLRDRAL-EVDAPYV---TLHSGKRLRAGAIVIACGLGANRLLDENW------ 202
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
++ +KG L + + + L L+H +E GY G H S++
Sbjct: 203 ----LRAKKGQLAITDRYGPL-LSHQLVELGY----------GASAHAGGTSVAFNIQPR 247
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
G L++GSSRQF + E++ ++ + RA F P L L + S G R
Sbjct: 248 PTGQLLIGSSRQFDNTDREIDLPLLATMLARARHFLPSLESLNIIRCWS------GFRAA 301
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
DG P+IGP P ++LA GHEGLG++ A TAEL+ +L
Sbjct: 302 SADGNPLIGPHPTRPGIWLALGHEGLGVTTAPATAELLCAQIL 344
>gi|218903957|ref|YP_002451791.1| putative glycine oxidase [Bacillus cereus AH820]
gi|228934107|ref|ZP_04096947.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|218537778|gb|ACK90176.1| putative glycine oxidase [Bacillus cereus AH820]
gi|228825550|gb|EEM71343.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 391
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 173/376 (46%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDKDGSFI--VETTNET-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ G+ +G L T + N ++GSSR+F GF+T++ +I
Sbjct: 246 ----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|298244332|ref|ZP_06968138.1| glycine oxidase ThiO [Ktedonobacter racemifer DSM 44963]
gi|297551813|gb|EFH85678.1| glycine oxidase ThiO [Ktedonobacter racemifer DSM 44963]
Length = 377
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 189/413 (45%), Gaps = 54/413 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D+++IG G+IG +IA L + + V+VV+K + A+GA G + + I L
Sbjct: 6 DILVIGGGVIGCSIA-YFLRKNGIKVSVVEKGNIGAQASGAAVGLL--------APIRPL 56
Query: 143 ALRSNKLWKMLADSLRDQGLDP-LQVIG-----WKQTGSLLIGRTPEELVMLKERVKQLC 196
A +LA R + P L+ I ++QTG+L + E++ + V++
Sbjct: 57 AQLDAYKALLLAGMRRFPAILPELEAITGLRVTYEQTGTLRL-LPLEKVAPTQAWVREWQ 115
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRY 256
AG + LS +L EP L+ G + A + ++Q+ V + R
Sbjct: 116 NAGFSMQLLSKEELYANEPRLLPGVEG-AVSIKDEAQVSPSQLVQVFAQAARELG----- 169
Query: 257 AEFYHD-PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
A FY + V + RS++T V V+T+KN + S +++AAG WS + H L +
Sbjct: 170 AHFYENTEVVEIQRSDNTSCVTGVRTAKNEIISCGTLIIAAGAWSKDIGHLL------DV 223
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
IPV P +G L+ ++ S L + G + D+ L P D
Sbjct: 224 SIPVHPVRGELIAVKQL-SPPLQPILFDEG-IFDEDIYLAP---------------KPD- 265
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G +++GS++ GF+T V I + A P L + + GLRP
Sbjct: 266 -GTIIIGSTKAHVGFDTSVSSGGILHLLTVATRLLPDLTTSSI------HRTWAGLRPKT 318
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P KP+IG VP + V +A+GH G G++L++ T E++ ++++TN PF
Sbjct: 319 PRSKPIIGRVPHWNNVLVASGHGGFGITLSILTGEVITELIVTNKTPKSILPF 371
>gi|118478187|ref|YP_895338.1| sarcosine oxidase subunit beta [Bacillus thuringiensis str. Al
Hakam]
gi|196043205|ref|ZP_03110443.1| putative glycine oxidase [Bacillus cereus 03BB108]
gi|118417412|gb|ABK85831.1| sarcosine oxidase, beta subunit [Bacillus thuringiensis str. Al
Hakam]
gi|196025514|gb|EDX64183.1| putative glycine oxidase [Bacillus cereus 03BB108]
Length = 391
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 174/376 (46%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L +
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------RS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDKDGSFI--VETTNGT-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ G+ +G L T + N ++GSSR+F GF+T++ +I
Sbjct: 246 ----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|196032100|ref|ZP_03099514.1| putative glycine oxidase [Bacillus cereus W]
gi|228946448|ref|ZP_04108766.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|195994851|gb|EDX58805.1| putative glycine oxidase [Bacillus cereus W]
gi|228813196|gb|EEM59499.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 391
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 173/376 (46%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDKDGSFI--VETTNET-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ G+ +G L T + N ++GSSR+F GF+T++ +I
Sbjct: 246 ----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPDYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|374313637|ref|YP_005060067.1| FAD dependent oxidoreductase [Granulicella mallensis MP5ACTX8]
gi|358755647|gb|AEU39037.1| FAD dependent oxidoreductase [Granulicella mallensis MP5ACTX8]
Length = 377
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 196/414 (47%), Gaps = 61/414 (14%)
Query: 82 FDVIIIGAGIIGLTIARQL-LVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
FDV+IIGAGI+G +AR+ L+G V VV+ P GAT AG G++ ++ +
Sbjct: 4 FDVLIIGAGIVGSAVARECALLG--WRVGVVEGGTPAGGATAAGMGHVVVMDDSAAQ--- 58
Query: 141 DLALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA 198
LAL S LW A+S + + + ++ G++ + EE+ + R K EA
Sbjct: 59 -LALTAFSRSLWH--AESTKFP-----KSVEYEGRGTIWVAADEEEMAEVGTRQKVYEEA 110
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE 258
G+ A L++++L + EP L G + +P D + A A+ + ++ YA
Sbjct: 111 GIEASLLTATELAKQEPNLRPGL-AGGLLVPEDGVVYPPAAAAFYLSEAKRLGAEVFYA- 168
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
R+ S + V+ S T + IV+A G E +++ +P
Sbjct: 169 ----------RALSASHKQ-VRLSDGTELTADRIVLAVGT-----------ECDLLPALP 206
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYV-GHHDLTLHPGQVNHGQILSISMTATTDVIG 377
++ RKGHL++ + + L+H +E GY+ H +T S++ G
Sbjct: 207 IQKRKGHLVITDRYPDF-LHHQLVELGYLKSAHKVTDD----------SVAFNIQPRQTG 255
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
L+LGSSRQ+ E E ++ R+ RA ++ PKL +L S +V G R D
Sbjct: 256 QLLLGSSRQYGNEQPEAEAEMLRRMIDRAKQYMPKLENL------SVLRVWTGFRAATAD 309
Query: 438 GKPVIGPVPGL---SKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P+IGP GL S ++LA G EGLG++ A G A L+ D +L +D+ P+
Sbjct: 310 KLPLIGPAAGLSDDSSLWLAAGFEGLGITNAPGAARLLVDGMLGRESAIDATPY 363
>gi|423559528|ref|ZP_17535830.1| hypothetical protein II3_04732 [Bacillus cereus MC67]
gi|401188032|gb|EJQ95101.1| hypothetical protein II3_04732 [Bacillus cereus MC67]
Length = 391
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 175/380 (46%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIKEESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGTK----TFNHTEVKEMKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T +
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISGVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|52142680|ref|YP_084149.1| sarcosine oxidase, beta subunit [Bacillus cereus E33L]
gi|229091841|ref|ZP_04223034.1| Sarcosine oxidase, beta subunit [Bacillus cereus Rock3-42]
gi|300119318|ref|ZP_07057000.1| sarcosine oxidase, beta subunit [Bacillus cereus SJ1]
gi|51976149|gb|AAU17699.1| sarcosine oxidase, beta subunit [Bacillus cereus E33L]
gi|228691503|gb|EEL45260.1| Sarcosine oxidase, beta subunit [Bacillus cereus Rock3-42]
gi|298723303|gb|EFI64063.1| sarcosine oxidase, beta subunit [Bacillus cereus SJ1]
Length = 391
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 173/376 (46%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDKDGSFI--VETTNGT-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ G+ +G L T + N ++GSSR+F GF+T++ +I
Sbjct: 246 ----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|228927886|ref|ZP_04090933.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229122383|ref|ZP_04251597.1| Sarcosine oxidase, beta subunit [Bacillus cereus 95/8201]
gi|228661232|gb|EEL16858.1| Sarcosine oxidase, beta subunit [Bacillus cereus 95/8201]
gi|228831772|gb|EEM77362.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 391
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 173/376 (46%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDKDGSFI--VETTNGT-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ G+ +G L T + N ++GSSR+F GF+T++ +I
Sbjct: 246 ----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPDYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|423365419|ref|ZP_17342852.1| hypothetical protein IC3_00521 [Bacillus cereus VD142]
gi|401090786|gb|EJP98938.1| hypothetical protein IC3_00521 [Bacillus cereus VD142]
Length = 391
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 179/383 (46%), Gaps = 58/383 (15%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLTESKKFGTKA----FNHTEVKEVKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVL---ENFNSLKLNHA 340
T ++ K +V AAG W+ + L ++IP++PRKGH++V ++ S K+
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGSRKV--- 239
Query: 341 SMEAGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
ME GY+ ++ G+ +G L T + N ++GSSR+F GF+T
Sbjct: 240 -MEFGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTR 290
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ +I I RA FYPK+ D+ + + GLRP+ D P+I V + F+
Sbjct: 291 INNEVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISGVEHIPNYFI 344
Query: 454 ATGHEGLGLSLALGTAELVADMV 476
A GHEG G+SLA T +++ +++
Sbjct: 345 AAGHEGDGISLAAVTGKVIEELL 367
>gi|49479100|ref|YP_036920.1| sarcosine oxidase subunit beta [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|196042007|ref|ZP_03109293.1| putative glycine oxidase [Bacillus cereus NVH0597-99]
gi|225864809|ref|YP_002750187.1| putative glycine oxidase [Bacillus cereus 03BB102]
gi|301054357|ref|YP_003792568.1| sarcosine oxidase subunit beta [Bacillus cereus biovar anthracis
str. CI]
gi|423551432|ref|ZP_17527759.1| hypothetical protein IGW_02063 [Bacillus cereus ISP3191]
gi|49330656|gb|AAT61302.1| sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|196027141|gb|EDX65762.1| putative glycine oxidase [Bacillus cereus NVH0597-99]
gi|225789680|gb|ACO29897.1| putative glycine oxidase [Bacillus cereus 03BB102]
gi|300376526|gb|ADK05430.1| sarcosine oxidase, beta subunit [Bacillus cereus biovar anthracis
str. CI]
gi|401187270|gb|EJQ94343.1| hypothetical protein IGW_02063 [Bacillus cereus ISP3191]
Length = 391
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 173/376 (46%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDKDGSFI--VETTNGT-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ G+ +G L T + N ++GSSR+F GF+T++ +I
Sbjct: 246 ----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPDYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|290955805|ref|YP_003486987.1| oxidoreductase [Streptomyces scabiei 87.22]
gi|260645331|emb|CBG68417.1| putative secreted oxidoreductase [Streptomyces scabiei 87.22]
Length = 388
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 171/383 (44%), Gaps = 37/383 (9%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L V VVD+ G TGAG+G I + + PG E+ +LAL S++LW LA + + G
Sbjct: 30 LDVVVVDRGPVGGGTTGAGEGNILVSDKEPGPEL-ELALLSHRLWAELA-AEPELG---- 83
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+ ++ G L++ L L+ +G+ A + + L EP L G
Sbjct: 84 KTFEYEAKGGLVVASATAGLAALERFAAGQRASGVEAVSVPADRLPDLEPHLAPGLAGGV 143
Query: 226 AFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT 285
+ P D+Q+ LA A + + + GR VT +LR+ G V V+T +
Sbjct: 144 HY-PQDAQVMPTLAAARLLRASGARLLTGRT-------VTEVLRAPD-GAVRGVRTDRGD 194
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
++S A+V AAG W G L + +PV PR+G ++V E ++ H A
Sbjct: 195 VHSP-AVVNAAGTWGGELA------ALAGVTLPVLPRRGFVIVTEPLPP-RVRHKVYAAD 246
Query: 346 YVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKR 405
YV + L S G +++G+SR+ GF+ + +
Sbjct: 247 YVAD--------VASDSAALQTSPVVEGTAAGPVLIGASRERVGFDRSFSLPAVRALAAG 298
Query: 406 AAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLA 465
A +P L + + + G RPYMPD P IGP P +F A GHEG G+ LA
Sbjct: 299 ATRLFPFLEE------VRAMRTYTGFRPYMPDHLPAIGPDPRAPGLFHACGHEGAGIGLA 352
Query: 466 LGTAELVADMVLTNPLKVDSAPF 488
GT L+A ++ P ++D PF
Sbjct: 353 TGTGRLIAQVLGGGPPELDLGPF 375
>gi|47567650|ref|ZP_00238360.1| oxidoreductase, FAD-binding, putative [Bacillus cereus G9241]
gi|47555627|gb|EAL13968.1| oxidoreductase, FAD-binding, putative [Bacillus cereus G9241]
Length = 391
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 173/376 (46%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDIDDSFI--VETTNGT-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGEML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ G+ +G L T + N ++GSSR+F GF+T + +I
Sbjct: 246 ----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTGINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V +S F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHISNYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|228915434|ref|ZP_04079024.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228844211|gb|EEM89270.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 391
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 173/376 (46%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVMDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDKDGSFI--VETTNGT-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ G+ +G L T + N ++GSSR+F GF+T++ +I
Sbjct: 246 ----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|423611222|ref|ZP_17587083.1| hypothetical protein IIM_01937 [Bacillus cereus VD107]
gi|401248675|gb|EJR54997.1| hypothetical protein IIM_01937 [Bacillus cereus VD107]
Length = 391
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 179/383 (46%), Gaps = 58/383 (15%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKEMKRDIDGYFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVL---ENFNSLKLNHA 340
T +K+ +V AAG W+ + L ++IP++PRKGH++V ++ S K+
Sbjct: 190 GTFIAKQ-VVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGSRKV--- 239
Query: 341 SMEAGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
ME GY+ ++ G+ +G L T + N ++GSSR+F GF+T
Sbjct: 240 -MEFGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTR 290
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ +I I RA FYPK+ D+ + + GLRP+ D P+I V + F+
Sbjct: 291 INNEVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFI 344
Query: 454 ATGHEGLGLSLALGTAELVADMV 476
A GHEG G+SLA T +++ +++
Sbjct: 345 AAGHEGDGISLAAVTGKVIEELL 367
>gi|444359619|ref|ZP_21160917.1| FAD dependent oxidoreductase, partial [Burkholderia cenocepacia
BC7]
gi|443601628|gb|ELT69763.1| FAD dependent oxidoreductase, partial [Burkholderia cenocepacia
BC7]
Length = 332
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 169/379 (44%), Gaps = 53/379 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V VVD GATGAG G+ +V + L
Sbjct: 7 DVVVIGAGIVGAACAHEL-AQRGLRVLVVDDA--SGGATGAGMGH--LVAMDDNAAELAL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW+ L+ + D ++ G+L + E+ + + + L G+
Sbjct: 62 SHYSIELWRALSGEMPDG-------CAYRNCGTLWLAADAHEMDLARAKQATLAAHGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E + ++ L Q EP L G A +P D+ L A + ++ + + A
Sbjct: 115 ELIDAAALAQLEPMLRAGLGG-ALKIPGDAILYAPVTANWLLQRAPRVTVRRERAVAVDG 173
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
P L S + L +++ +VVA G + +L+ +L P++P+
Sbjct: 174 PSVTL-------------ASGDVLRAER-VVVANGVAARTLLPEL----------PLRPK 209
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHLL+ + + ++H +E GY + S++ G L++G
Sbjct: 210 KGHLLITDRYPG-HVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLLIG 259
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + +VE ++ R+ +RA + P L DL + + G R PDG P++
Sbjct: 260 SSRQFDTEDAQVEPPVLARMLRRAVGYLPALADL------NGIRAWTGFRSASPDGLPLL 313
Query: 443 GPVPGLSKVFLATGHEGLG 461
G P V+LA GHEGLG
Sbjct: 314 GEHPARPGVWLAVGHEGLG 332
>gi|163940584|ref|YP_001645468.1| FAD dependent oxidoreductase [Bacillus weihenstephanensis KBAB4]
gi|163862781|gb|ABY43840.1| FAD dependent oxidoreductase [Bacillus weihenstephanensis KBAB4]
Length = 391
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 176/380 (46%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKEVKRDIDGSFI--VETTI 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T++
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|423662316|ref|ZP_17637485.1| hypothetical protein IKM_02713 [Bacillus cereus VDM022]
gi|401297935|gb|EJS03540.1| hypothetical protein IKM_02713 [Bacillus cereus VDM022]
Length = 391
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 176/380 (46%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIKEESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKEVKRDIDGSFI--VETTI 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T++
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|228985930|ref|ZP_04146077.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228773786|gb|EEM22205.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 391
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 170/372 (45%), Gaps = 36/372 (9%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVTRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDIDDSFI--VETTNGT-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V ++ ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DINIPIEPRKGHIIVASRQQNVGCRKV-MEFGYL 245
Query: 348 GHH---DLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWK 404
+ +G L T + N ++GSSR+F GF+T + +I I
Sbjct: 246 ISKFGGKRKVDALTETYGVALVFEPTESQ----NFLIGSSREFVGFHTRINNEVIKCIAN 301
Query: 405 RAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG G+SL
Sbjct: 302 RAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGDGISL 355
Query: 465 ALGTAELVADMV 476
A T +++ +++
Sbjct: 356 AAVTGKVIEELL 367
>gi|423482577|ref|ZP_17459267.1| hypothetical protein IEQ_02355 [Bacillus cereus BAG6X1-2]
gi|401143881|gb|EJQ51415.1| hypothetical protein IEQ_02355 [Bacillus cereus BAG6X1-2]
Length = 391
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 176/380 (46%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKEMKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T++
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYP++ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPEMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|407709278|ref|YP_006793142.1| FAD dependent oxidoreductase [Burkholderia phenoliruptrix BR3459a]
gi|407237961|gb|AFT88159.1| FAD dependent oxidoreductase [Burkholderia phenoliruptrix BR3459a]
Length = 381
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 192/415 (46%), Gaps = 60/415 (14%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T D +I+GAGI+G A +L + V V+D G T AG G+I +++ +P
Sbjct: 8 TADALIVGAGIVGAACAAELAA-LGMQVEVLDAQGVGGGTTAAGMGHIVVMNDSPAE--L 64
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
L+L S LW LA LR + + + G+L + EE + G+
Sbjct: 65 ALSLYSRDLWLQLAPQLRARD-------AFARCGTLWLAADEEEWQAARATQAAYEAQGV 117
Query: 201 RAEYLSSSDLLQAEPEL---MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
AE L +S L Q EP + +VG +P+DS + A A ++ + A+ G
Sbjct: 118 SAELLDASALRQCEPAVAASLVG----GLRIPHDSIVYAPTAAEWLLTQSPASATIGVR- 172
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
PV +R + TG V + + ++VA G L E++ +
Sbjct: 173 --LGAPV---VRVDPTG----VTLANGERRGARHVIVANG----------LGARELLPTL 213
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
P++P+KGHLL+ + + L ++H +E GY+ +H S++ A G
Sbjct: 214 PLQPKKGHLLITDRYPEL-IHHQLLELGYIK---------SAHHATGTSVAFNAQPRPTG 263
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
L++GSSRQF + VE ++ ++ +RAA + P L L + + G R PD
Sbjct: 264 QLLIGSSRQFDTTDPAVELPVLAQMLQRAAHYLPMLPQL------NGIRAWTGFRAASPD 317
Query: 438 GKPVIGP----VPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P+IGP PG V+LA GHEGLG++ +L TA+L+A ++ + P+
Sbjct: 318 GLPLIGPAGDHAPG---VWLAVGHEGLGVTTSLATAKLLAAQIVGQAAAIPVEPY 369
>gi|229161703|ref|ZP_04289683.1| Sarcosine oxidase, beta subunit [Bacillus cereus R309803]
gi|228621948|gb|EEK78794.1| Sarcosine oxidase, beta subunit [Bacillus cereus R309803]
Length = 391
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 170/380 (44%), Gaps = 50/380 (13%)
Query: 107 SVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQ 166
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 28 DVTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------H 79
Query: 167 VIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA 226
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 80 SFEYRAPGSILVCESDEEMEAAQQWVDRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGL 138
Query: 227 FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTL 286
DS ++ L + + F +K + H V + + + V T+ T
Sbjct: 139 ECATDSTVNPYLLAFSLLAEAKKFGTKA----YNHTEVKEMKKEEDGSFI--VDTTNGT- 191
Query: 287 YSKKAIVVAAGCWSGSL--MHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEA 344
Y+ K +V AAG W+ + M D+ +IP++PRKGH++V + ME
Sbjct: 192 YTAKQVVNAAGVWAPKIGKMLDV--------NIPIEPRKGHIIVASRQQHVGCRKV-MEF 242
Query: 345 GYVGHH--------DLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ DLT +G L T + N ++GSSR+F GF+T +
Sbjct: 243 GYLISKFGGKRQVDDLT-----EKYGVALVFEPTESQ----NFLIGSSREFVGFHTRINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T ++V +++
Sbjct: 348 HEGDGISLAAVTGKVVEELL 367
>gi|423510817|ref|ZP_17487348.1| hypothetical protein IG3_02314 [Bacillus cereus HuA2-1]
gi|402453770|gb|EJV85570.1| hypothetical protein IG3_02314 [Bacillus cereus HuA2-1]
Length = 391
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 175/380 (46%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S L L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQNLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIKEESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKEMKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T++
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISGVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|116049219|ref|YP_791978.1| hypothetical protein PA14_47850 [Pseudomonas aeruginosa UCBPP-PA14]
gi|421175658|ref|ZP_15633333.1| hypothetical protein PACI27_3859 [Pseudomonas aeruginosa CI27]
gi|115584440|gb|ABJ10455.1| putative D-amino acid oxidase [Pseudomonas aeruginosa UCBPP-PA14]
gi|404531946|gb|EKA41876.1| hypothetical protein PACI27_3859 [Pseudomonas aeruginosa CI27]
Length = 371
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 187/418 (44%), Gaps = 70/418 (16%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGI+G A +L L V V+D GAT G G++ + P +L
Sbjct: 4 EVIVVGAGIVGSACAHELAC-RGLDVLVLDSRR--GGATAVGMGHLVAMDDNPA----EL 56
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S + W+ A L + ++ G+L + EL + + + L AG+
Sbjct: 57 ALSDYSIQAWRTWAADLPED-------CAYRNCGTLWLAADAAELAEAERKRQALLAAGV 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYI--EKGNRHFASKGRYAE 258
E L ++ L EP L G + A +P D L A A ++ G R
Sbjct: 110 ACEMLDAARLRDLEPVLRPGL-AGALKVPGDGILYAPNAARWLLERAGPR---------- 158
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTL-----YSKKAIVVAAGCWSGSLMHDLLRETEI 313
LLR ++ EV V S+ L S +A+V+A G +G E+
Sbjct: 159 --------LLRLHA--EVSEVDGSRLRLADGRWLSAEALVLANGIHAG----------EL 198
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
++P++P+KGHLL+ + + L H +E GYV + S++ A
Sbjct: 199 CAELPIRPKKGHLLITDRYPG-TLRHQLVELGYVS---------SAHASSGTSVAFNAQP 248
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
G + LGSSRQF + +VE ++ R+ +RA ++ P L L + + G R
Sbjct: 249 RPTGQIFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGL------NAIRAWTGFRA 302
Query: 434 YMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
PDG P++G P ++LA GHEGLG++ A G+A L+A + +D P+ Q
Sbjct: 303 ATPDGLPLLGEHPAQPGLWLAVGHEGLGVTTAPGSARLLAAQLFGETPPLDPTPYLPQ 360
>gi|344171596|emb|CCA84213.1| putative oxidoreductase, FAD-binding family protein [Ralstonia
syzygii R24]
Length = 375
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 185/412 (44%), Gaps = 54/412 (13%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T DV++IGAGI+G A +L L V V+D GAT AG G+I +++ +P
Sbjct: 2 TPDVVVIGAGIVGAACAAELAA-HGLQVEVIDAGGIGGGATAAGMGHIVVMNDSPAE--C 58
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
L S LW LA LR + + +G+L + EE Q G+
Sbjct: 59 ALTCYSRDLWLALAPQLRTKD-------AFIYSGTLWVAVDEEEWHAACTMHGQFAARGI 111
Query: 201 RAEYLSSSDLLQAEPEL---MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
+ L + L EP L M G + +DS + A A ++ + + H G
Sbjct: 112 SGDLLDAQTLRACEPALSPTMYG----GLRIEHDSVVYAPTAAQWLLEQSPH---AGNIR 164
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
H V L + V+ + T + IVVA G + L L
Sbjct: 165 LRLHTQVIAL-------GGQCVKLADGTSITGAHIVVANGLGARYLWPSL---------- 207
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
P++ +KGHLL+ + + + + H +E GY+ + S++ A G
Sbjct: 208 PLRAKKGHLLITDRYPGM-IRHQLLELGYIK---------SAHKSTGTSVAFNAQPRPTG 257
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
L++GSSRQF + VE ++ ++ +RAA + P L L S + G R PD
Sbjct: 258 QLLIGSSRQFDTTDLAVEMPVLAQMLQRAATYLPALPSL------SGIRAWTGFRAASPD 311
Query: 438 GKPVIGPV-PGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P+IGP P ++LA GHEGLG++ ALGTA+L+ +L +P +D++P+
Sbjct: 312 GLPLIGPADPSTRGMWLAVGHEGLGVTTALGTAKLLTAQILGSPAAIDASPY 363
>gi|323528429|ref|YP_004230581.1| FAD dependent oxidoreductase [Burkholderia sp. CCGE1001]
gi|323385431|gb|ADX57521.1| FAD dependent oxidoreductase [Burkholderia sp. CCGE1001]
Length = 375
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 193/416 (46%), Gaps = 62/416 (14%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGS-DLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEI 139
T D +I+GAGI+G A +L G+ + V V+D GAT AG G+I +++ +P
Sbjct: 2 TADALIVGAGIVGAACAAEL--GALGMQVEVLDAQGVGGGATAAGMGHIVVMNDSPAE-- 57
Query: 140 WDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
L+L S LW LA LR + + + G+L + EE G
Sbjct: 58 LALSLYSRDLWLQLAPQLRARD-------AFARCGTLWLAADEEEWQAAHAMQAAYEAQG 110
Query: 200 LRAEYLSSSDLLQAEPEL---MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRY 256
+ AE L +S L Q EP + +VG + +DS + A A ++ + A+ G
Sbjct: 111 VSAELLDASALRQCEPAVAASLVG----GLRIAHDSIVYAPTAAEWLLTQSPASATIGVR 166
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
PV +R + TG V + + ++VA G L E++
Sbjct: 167 ---LGAPV---VRVDPTG----VTLANGERRGARHVIVANG----------LGARELLPT 206
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
+P++P+KGHLL+ + + L ++H +E GY+ +H S++ A
Sbjct: 207 LPLQPKKGHLLITDRYPEL-IHHQLLELGYI---------KSAHHATGTSVAFNAQPRPT 256
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
G L++GSSRQF + VE ++ ++ +RAA + P L L + + G R P
Sbjct: 257 GQLLIGSSRQFDTTDPAVELPVLAQMLQRAAHYLPMLPQL------NGIRAWTGFRAASP 310
Query: 437 DGKPVIGP----VPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
DG P+IGP PG V+LA GHEGLG++ +L TA+L+A ++ + P+
Sbjct: 311 DGLPLIGPAGDHAPG---VWLAVGHEGLGVTTSLATAKLLAAQIVGQAAAIPVEPY 363
>gi|423599856|ref|ZP_17575856.1| hypothetical protein III_02658 [Bacillus cereus VD078]
gi|401234543|gb|EJR41021.1| hypothetical protein III_02658 [Bacillus cereus VD078]
Length = 391
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 174/380 (45%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S L L++ L
Sbjct: 29 VTIIEKGEIVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQNLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIKEESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGAKA----FNHTEVKEMKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T +
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISGVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|423487959|ref|ZP_17464641.1| hypothetical protein IEU_02582 [Bacillus cereus BtB2-4]
gi|423493681|ref|ZP_17470325.1| hypothetical protein IEW_02579 [Bacillus cereus CER057]
gi|423499527|ref|ZP_17476144.1| hypothetical protein IEY_02754 [Bacillus cereus CER074]
gi|401153352|gb|EJQ60779.1| hypothetical protein IEW_02579 [Bacillus cereus CER057]
gi|401156785|gb|EJQ64187.1| hypothetical protein IEY_02754 [Bacillus cereus CER074]
gi|402436024|gb|EJV68057.1| hypothetical protein IEU_02582 [Bacillus cereus BtB2-4]
Length = 391
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 174/380 (45%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S L L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQNLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIKEESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGAKA----FNHTEVKEMKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T +
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|423384379|ref|ZP_17361635.1| hypothetical protein ICE_02125 [Bacillus cereus BAG1X1-2]
gi|423529248|ref|ZP_17505693.1| hypothetical protein IGE_02800 [Bacillus cereus HuB1-1]
gi|401640280|gb|EJS58012.1| hypothetical protein ICE_02125 [Bacillus cereus BAG1X1-2]
gi|402448677|gb|EJV80516.1| hypothetical protein IGE_02800 [Bacillus cereus HuB1-1]
Length = 391
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 174/379 (45%), Gaps = 50/379 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEKLE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVDRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTS 282
DS ++ L + + F +K F V + + +N + VE +
Sbjct: 141 AT-----DSTVNPYLLAFSLLSEAQKFGAKA----FKQTEVKSMKIETNGSFVVE----T 187
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
N ++ K +V AAG W+ + L ++IP++PRKGH++V + M
Sbjct: 188 TNGTFTAKQVVNAAGVWAPKIGQML------NVNIPIEPRKGHIIVASRQQHVGCRKV-M 240
Query: 343 EAGYV-----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
E GY+ G + + + +G L T + N ++GSSR+F GF+T +
Sbjct: 241 EFGYLISKFGGKRKVDVLTEK--YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNE 294
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GH
Sbjct: 295 VIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGH 348
Query: 458 EGLGLSLALGTAELVADMV 476
EG G+SLA T +++ +++
Sbjct: 349 EGDGISLAAVTGKVIEELL 367
>gi|332798040|ref|YP_004459539.1| D-amino-acid dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
gi|438000927|ref|YP_007270670.1| FAD dependent oxidoreductase [Tepidanaerobacter acetatoxydans Re1]
gi|332695775|gb|AEE90232.1| D-amino-acid dehydrogenase [Tepidanaerobacter acetatoxydans Re1]
gi|432177721|emb|CCP24694.1| FAD dependent oxidoreductase [Tepidanaerobacter acetatoxydans Re1]
Length = 405
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 184/395 (46%), Gaps = 52/395 (13%)
Query: 101 LVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160
L +SV +V+K SG +GA + + + PG + +AL KL+ +D RD
Sbjct: 22 LAKKGVSVILVEKNDIASGTSGACDKAVLLQSKNPGLHL-KMALEGIKLF---SDLQRDL 77
Query: 161 GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL--- 217
+D I +K G +++ T E+ ++++ V++ + GL + L + Q +P
Sbjct: 78 DVD----IEFKNAGGMIVIYTQEQWQVMEQFVERQNKLGLSVKLLERDEARQKQPAFAKD 133
Query: 218 MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
+VG + + P DS+++ + +G + + +K E V + N G V
Sbjct: 134 IVG----STYSPMDSEVNPIYLTLGFFRGAKKYGAK----EMLGTEVKAIKLEN--GRVC 183
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLE------- 330
+V T + ++ A+V A G ++ + + +D+P+ PR+G ++V E
Sbjct: 184 SVVTDHGEIMTR-AVVNACGVYAPFI------SAMVGIDVPIVPRRGQIMVTEPVAPLIH 236
Query: 331 -NFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAG 389
+ N K A + +G+ + G LS+ T GN+++G +R+FAG
Sbjct: 237 GDINCAKYITAKFKPELLGNDE------NAQLGVGLSLGQTEN----GNILIGGTREFAG 286
Query: 390 FNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLS 449
++ + + K AA+ P L+D+ + + GLRPY PDG P++G V +
Sbjct: 287 YSKNTTHRALRAVLKHAAKLVPALKDISIIRSFA------GLRPYTPDGLPILGSVRQVE 340
Query: 450 KVFLATGHEGLGLSLALGTAELVADMVLTNPLKVD 484
++A GHEG G++L+ T ++ D++ +D
Sbjct: 341 GFYMAAGHEGDGIALSAITGRILCDLITKGRTSLD 375
>gi|229156415|ref|ZP_04284508.1| Sarcosine oxidase, beta subunit [Bacillus cereus ATCC 4342]
gi|228627049|gb|EEK83783.1| Sarcosine oxidase, beta subunit [Bacillus cereus ATCC 4342]
Length = 391
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 173/376 (46%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDIDDSFI--VETTNGT-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQLVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ G+ +G L T + N ++GSSR+F GF+T++ +I
Sbjct: 246 ----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|229012093|ref|ZP_04169272.1| Sarcosine oxidase, beta subunit [Bacillus mycoides DSM 2048]
gi|228749181|gb|EEL99027.1| Sarcosine oxidase, beta subunit [Bacillus mycoides DSM 2048]
Length = 391
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 177/380 (46%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V ++ + G V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLTESKKFGTKA----FNHTEVK-EIKIDIDGSF-IVETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T++
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|167584817|ref|ZP_02377205.1| FAD dependent oxidoreductase [Burkholderia ubonensis Bu]
Length = 375
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 177/409 (43%), Gaps = 59/409 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V V+D GATGAG G++ + +L
Sbjct: 7 DVVVIGAGIVGAACAHEL-AQRGLRVLVLDDA--SGGATGAGMGHLVAMD----DNAAEL 59
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S +LW+ L+ + ++ G+L + E+ + + + L G+
Sbjct: 60 ALSHFSIELWRGLSGGMPGG-------CAYRNCGTLWLAADSNEMDLARAKQATLAAHGV 112
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E + L EP L G A +P D L A + ++
Sbjct: 113 AGELVDGGALAALEPMLRPGLGG-ALRIPGDGILYAPVTANWL---------------LQ 156
Query: 261 HDPVTCLLRSNSTG-EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
P L R + + +V + + + +VVA G + +L+ +L P+
Sbjct: 157 RVPGIVLRRDKAVAVDGPSVTLANGDVLRAERVVVANGVAARTLLPEL----------PL 206
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+P+KGHLL+ + + ++H +E GY + S++ G L
Sbjct: 207 RPKKGHLLITDRYPGC-VSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQL 256
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++GSSRQF + VE ++ R+ +RA + P L DL + + G R PDG
Sbjct: 257 LIGSSRQFDTEDPRVEPPVLARMLRRAVGYLPALADL------NGIRSWTGFRAASPDGL 310
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++G P ++LA GHEGLG++ A G+A LVA + +D P+
Sbjct: 311 PLLGEHPARPGLWLAVGHEGLGVTTAPGSARLVAAQMFGERPPIDIEPY 359
>gi|423517561|ref|ZP_17494042.1| hypothetical protein IG7_02631 [Bacillus cereus HuA2-4]
gi|401163833|gb|EJQ71178.1| hypothetical protein IG7_02631 [Bacillus cereus HuA2-4]
Length = 391
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 174/380 (45%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S L L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQNLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + E GL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEVGLPFRMLDRQDIKEESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V L R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKELKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T++
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|351728575|ref|ZP_08946266.1| hypothetical protein AradN_02280 [Acidovorax radicis N35]
Length = 371
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 190/419 (45%), Gaps = 69/419 (16%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEI 139
HT DV++IGAGI+G A +L++ + LSV V+D + GAT AG G++ ++ P
Sbjct: 3 HT-DVLVIGAGIVGAACAHELVL-AGLSVRVIDARL--GGATAAGMGHLVVMDDNPA--- 55
Query: 140 WDLALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCE 197
+LAL S LW A + D G + G+L + EL ++ L
Sbjct: 56 -ELALSQTSLDLWHAWAPHM-DAG------CAFTPCGTLWLAANDAELQAAHDKRTTLQA 107
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
G+ E L ++ L +AEP L G LA A +G+ + R A
Sbjct: 108 HGIACEMLDAAALARAEPALRPG-----------------LAAALKVQGDSAVYAP-RAA 149
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLY-------SKKAIVVAAGCWSGSLMHDLLRE 310
++ D R + EA+Q +T+ S AIVVA+G +
Sbjct: 150 QWLLDQAAAHGRL-VLEQAEALQIDGHTVTLRDGSQRSAGAIVVASG----------IHA 198
Query: 311 TEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMT 370
+ +P++P+KGHL++ + + ++H +E GY+ +H S++
Sbjct: 199 PRLCPGLPLRPKKGHLVITDRYPG-TVHHQLVELGYIT---------SAHHSDGTSVAFN 248
Query: 371 ATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIG 430
G L++GSSR+F + V ++ R+ +RA ++ P L DL + + G
Sbjct: 249 VQPRPTGQLLIGSSREFDTTDPAVNNAVMARMLQRALDYLPGLADL------NAIRTWTG 302
Query: 431 LRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
R PD P+IG P ++LA GHEGLG++ A TA+L+A + +D P+A
Sbjct: 303 FRAATPDSLPLIGAHPEHPHLWLAVGHEGLGVTTAPATAQLLAAQIAGGTPAIDPTPYA 361
>gi|402559838|ref|YP_006602562.1| glycine oxidase [Bacillus thuringiensis HD-771]
gi|401788490|gb|AFQ14529.1| glycine oxidase [Bacillus thuringiensis HD-771]
Length = 391
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 174/377 (46%), Gaps = 46/377 (12%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEKLE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVDRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTS 282
DS ++ L + + F +K F V + + +N + VE +
Sbjct: 141 AT-----DSTVNPYLLAFSLLSEAQKFGAKA----FKQTEVKSMKIETNGSFVVE----T 187
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
N ++ K +V AAG W+ + L ++IP++PRKGH++V + M
Sbjct: 188 TNGTFTAKQVVNAAGVWAPKIGQML------NVNIPIEPRKGHIIVASRQQHVGCRKV-M 240
Query: 343 EAGYVGHHDLTLHPGQVNHGQILS---ISMTATTDVIGNLVLGSSRQFAGFNTEVEQTII 399
E GY+ ++ G+ + +++ + N ++GSSR+F GF+T + +I
Sbjct: 241 EFGYL----ISKFGGKRKVDALTEKYGVALVFESTESQNFLIGSSREFVGFHTRINNEVI 296
Query: 400 DRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEG 459
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 297 KCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEG 350
Query: 460 LGLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 351 DGISLAAVTGKVIEELL 367
>gi|386059823|ref|YP_005976345.1| putative D-amino acid oxidase [Pseudomonas aeruginosa M18]
gi|347306129|gb|AEO76243.1| putative D-amino acid oxidase [Pseudomonas aeruginosa M18]
Length = 371
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 185/413 (44%), Gaps = 60/413 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGI+G A +L L V V+D GAT G G++ + P +L
Sbjct: 4 EVIVVGAGIVGSACAHEL-ARRGLDVLVLDSRR--GGATAVGMGHLVAMDDNPA----EL 56
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S + W+ A L + ++ G+L + EL + + + L AG+
Sbjct: 57 ALSDYSIQAWRTWAADLPED-------CAYRNCGTLWLAADAAELAEAERKRQALLAAGV 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E L ++ L EP L G + A +P D L A A ++ G
Sbjct: 110 ACEMLDAARLRDLEPVLRPGL-AGALKVPGDGILYAPNAARWL------LERAGPRLRRL 162
Query: 261 HDPVTCLLRSNSTGEVEA--VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
H V+ EV+ ++ + S +A+V+A G +G E+ ++P
Sbjct: 163 HAEVS---------EVDGSRLRLADGRWLSAEALVLANGIHAG----------ELCAELP 203
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + L H +E GYV + S++ A G
Sbjct: 204 IRPKKGHLLITDRYPG-TLRHQLVELGYVS---------SAHASSGTSVAFNAQPRPTGQ 253
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+ LGSSRQF + +VE ++ R+ +RA ++ P L L + + G R PDG
Sbjct: 254 VFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGL------NAIRAWTGFRAATPDG 307
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
P++G P ++LA GHEGLG++ A G+A L+A + +D+ P+ Q
Sbjct: 308 LPLLGEHPAQPGLWLAVGHEGLGVTTAPGSARLLAAQLFGETPPLDATPYLPQ 360
>gi|440702836|ref|ZP_20883914.1| FAD dependent oxidoreductase [Streptomyces turgidiscabies Car8]
gi|440275568|gb|ELP63974.1| FAD dependent oxidoreductase [Streptomyces turgidiscabies Car8]
Length = 390
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 181/413 (43%), Gaps = 35/413 (8%)
Query: 77 SRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG 136
S+ T DV++IGAG++G A L + L V+D+ G TGAG+G + + + PG
Sbjct: 2 SKRLTCDVVVIGAGMVGAACA-LYLARAGLVTLVLDRGPVAGGTTGAGEGNLLVSDKEPG 60
Query: 137 SEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
E+ DLAL S +LW LA G + ++ G +++ E + L
Sbjct: 61 PEL-DLALLSGRLWNDLAAEPGMGG-----AVEFEAKGGIVVASDAEGMATLTHFAAGQR 114
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRY 256
AG+ AE + + L EP L G + P D Q+ LA A + + R ++ R
Sbjct: 115 AAGVEAETVDAGRLADLEPHLAPGLAGGVRY-PQDCQVMPSLAAAQVVRAARRAGAELRT 173
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
VT +LR+ G V V+T+ +V AAG W G + +
Sbjct: 174 GTA----VTDILRAPD-GSVRGVRTAGLGDIHAPVVVNAAGTWGGEV------AALAGVR 222
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDV 375
+PV PR+G +LV E + H A YV V G L S
Sbjct: 223 LPVLPRRGFVLVTEPLPPGTVRHKVYAADYVA---------DVASGDAGLQSSAVVEGTA 273
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G +++G+SR+ GF+ ++ R+ +A +P L + + +G RPY+
Sbjct: 274 AGPVLIGASRERVGFDRTFSLPVVRRLAAQATALFPVLGS------VHAMRAYLGFRPYL 327
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PD P IG P ++ A GHEG G+ LA+GT L+A + +D PF
Sbjct: 328 PDHLPAIGADPRAPGLYHACGHEGAGIGLAVGTGHLIAQSLTDRTPDLDLTPF 380
>gi|421181747|ref|ZP_15639237.1| hypothetical protein PAE2_3702 [Pseudomonas aeruginosa E2]
gi|404543235|gb|EKA52526.1| hypothetical protein PAE2_3702 [Pseudomonas aeruginosa E2]
Length = 371
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 184/413 (44%), Gaps = 60/413 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGI+G A +L L V V+D GAT G G++ + P +L
Sbjct: 4 EVIVVGAGIVGSACAHEL-ARRGLDVLVLDSRR--GGATAVGMGHLVAMDDNPA----EL 56
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S + W+ A L + ++ G+L + EL + + + L AG+
Sbjct: 57 ALSDYSIQAWRTWAADLPED-------CAYRNCGTLWLAADAAELAEAERKRQALLAAGV 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E L ++ L EP L G + A +P D L A A ++ G
Sbjct: 110 ACEMLDAARLRDLEPVLRPGL-AGALKVPGDGILYAPNAARWL------LERAGPRLRRL 162
Query: 261 HDPVTCLLRSNSTGEVEA--VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
H V+ EV+ ++ + S +A+V+A G +G E+ ++P
Sbjct: 163 HAEVS---------EVDGSRLRLADGRWLSAEALVLANGIHAG----------ELCAELP 203
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + L H +E GYV + S++ A G
Sbjct: 204 IRPKKGHLLITDRYPG-TLRHQLVELGYVS---------SAHASSGTSVAFNAQPRPTGQ 253
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+ LGSSRQF + +VE ++ R+ +RA ++ P L L + + G R PDG
Sbjct: 254 IFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGL------NAIRAWTGFRAATPDG 307
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
P++G P ++LA GHEGLG++ A G+A L+A + +D P+ Q
Sbjct: 308 LPLLGEHPAQPGLWLAVGHEGLGVTTAPGSARLLAAQLFGETPPLDPTPYLPQ 360
>gi|420140732|ref|ZP_14648469.1| hypothetical protein PACIG1_3984 [Pseudomonas aeruginosa CIG1]
gi|421162019|ref|ZP_15620910.1| hypothetical protein PABE173_4472 [Pseudomonas aeruginosa ATCC
25324]
gi|403246495|gb|EJY60214.1| hypothetical protein PACIG1_3984 [Pseudomonas aeruginosa CIG1]
gi|404537231|gb|EKA46839.1| hypothetical protein PABE173_4472 [Pseudomonas aeruginosa ATCC
25324]
gi|453048415|gb|EME96128.1| putative D-amino acid oxidase [Pseudomonas aeruginosa PA21_ST175]
Length = 371
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 185/413 (44%), Gaps = 60/413 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGI+G A +L L V V+D GAT G G++ + P +L
Sbjct: 4 EVIVVGAGIVGSACAHEL-ARRGLDVLVLDSRR--GGATAVGMGHLVAMDDNPA----EL 56
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S + W+ A L + ++ G+L + EL + + + L AG+
Sbjct: 57 ALSDYSIQAWRTWAADLPED-------CAYRNCGTLWLAADAAELAEAERKRQALLAAGV 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E L ++ L EP L G + A +P D L A A ++ G
Sbjct: 110 ACEMLDAARLRDLEPVLRPGL-AGALKVPGDGILYAPNAARWL------LERAGPRLRRL 162
Query: 261 HDPVTCLLRSNSTGEVEA--VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
H V+ EV+ ++ + S +A+V+A G +G E+ ++P
Sbjct: 163 HAEVS---------EVDGSRLRLADGRWLSAEALVLANGIHAG----------ELCAELP 203
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + L H +E GYV + S++ A G
Sbjct: 204 IRPKKGHLLITDRYPG-TLRHQLVELGYVS---------SAHASSGTSVAFNAQPRPTGQ 253
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+ LGSSRQF + +VE ++ R+ +RA ++ P L L + + G R PDG
Sbjct: 254 VFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGL------NAIRAWTGFRAATPDG 307
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
P++G P ++LA GHEGLG++ A G+A L+A + +D+ P+ Q
Sbjct: 308 LPLLGEHPAQPGLWLAVGHEGLGVTTAPGSARLLAAQLFGETPPLDATPYLPQ 360
>gi|218897860|ref|YP_002446271.1| glycine oxidase [Bacillus cereus G9842]
gi|423360173|ref|ZP_17337676.1| hypothetical protein IC1_02153 [Bacillus cereus VD022]
gi|423562753|ref|ZP_17539029.1| hypothetical protein II5_02157 [Bacillus cereus MSX-A1]
gi|434375813|ref|YP_006610457.1| glycine oxidase [Bacillus thuringiensis HD-789]
gi|218540916|gb|ACK93310.1| putative glycine oxidase [Bacillus cereus G9842]
gi|401082263|gb|EJP90533.1| hypothetical protein IC1_02153 [Bacillus cereus VD022]
gi|401200249|gb|EJR07139.1| hypothetical protein II5_02157 [Bacillus cereus MSX-A1]
gi|401874370|gb|AFQ26537.1| glycine oxidase [Bacillus thuringiensis HD-789]
Length = 391
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 173/379 (45%), Gaps = 50/379 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEKLE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVDRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTS 282
DS ++ L + + F +K F V + + +N + VE +
Sbjct: 141 AT-----DSTVNPYLLAFSLLSEAQKFGAKA----FKQTEVKSMKIETNGSFVVE----T 187
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
N ++ K +V AAG W+ + L ++IP++PRKGH++V + M
Sbjct: 188 TNGTFTAKQVVNAAGVWAPKIGQML------NVNIPIEPRKGHIIVASRQQHVGCRKV-M 240
Query: 343 EAGYV-----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
E GY+ G + + +G L T + N ++GSSR+F GF+T +
Sbjct: 241 EFGYLISKFGGKRKVDALTEK--YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNE 294
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GH
Sbjct: 295 VIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGH 348
Query: 458 EGLGLSLALGTAELVADMV 476
EG G+SLA T +++ +++
Sbjct: 349 EGDGISLAAVTGKVIEELL 367
>gi|209522195|ref|ZP_03270835.1| FAD dependent oxidoreductase [Burkholderia sp. H160]
gi|209497368|gb|EDZ97583.1| FAD dependent oxidoreductase [Burkholderia sp. H160]
Length = 385
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 186/420 (44%), Gaps = 66/420 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D +IIGAGI+G A +L + V V+D GAT AG G+I +++ +P + L
Sbjct: 4 DALIIGAGIVGAACAAELAA-LGMRVDVLDAQRIGGGATAAGMGHIVVMNDSPAE--FAL 60
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW LA LR + + + G+L + EE + G+ A
Sbjct: 61 SRFSRELWLELAPQLRARD-------AFARCGTLWVAADDEEWQAARAMHAAFESQGVAA 113
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
+ L +++L EP L ++M IE + +A H
Sbjct: 114 QLLDAAELRACEPALA----------------ESMTGGLRIEHDSVVYAPTAAEWLLMHS 157
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAI-----VVAAGCWSGSLMHDLLRETEIVLDI 317
P + V ++ TL S + I VVA G L T+++ +
Sbjct: 158 PHAANISVRLGAPVVSIGAGGITLASGERIGAAHVVVANG----------LGATQLLPSL 207
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
P++P+KGHLL+ + + L + H +E GYV +H S++ A G
Sbjct: 208 PIQPKKGHLLITDRYPGL-IRHQLLELGYVK---------SAHHATSTSVAFNAQPRPTG 257
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
L+LGSSRQF + +VE ++ ++ +RAA++ P L L S + G R PD
Sbjct: 258 QLLLGSSRQFETTDPKVEMPVLAQMLQRAAQYLPALPSL------SGIRAWTGFRAAPPD 311
Query: 438 GKPVIGPVPGL---------SKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G P+IGP L S+V+LA GHEGLG++ +L TA+L+A + + P+
Sbjct: 312 GLPLIGPAGELAADVASGCASRVWLAVGHEGLGVTTSLATAKLLAAQIAGYAAPIPFEPY 371
>gi|423642159|ref|ZP_17617777.1| hypothetical protein IK9_02104 [Bacillus cereus VD166]
gi|423648727|ref|ZP_17624297.1| hypothetical protein IKA_02514 [Bacillus cereus VD169]
gi|401277102|gb|EJR83046.1| hypothetical protein IK9_02104 [Bacillus cereus VD166]
gi|401284225|gb|EJR90091.1| hypothetical protein IKA_02514 [Bacillus cereus VD169]
Length = 391
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 177/381 (46%), Gaps = 54/381 (14%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGED- 222
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 223 -SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQ 280
+ + PY +LA + + K + F +K F V + + +N + VE
Sbjct: 141 ATDSTVNPY------LLAFSLLSKAQK-FGTKA----FKQTEVKSINIDTNGSFVVE--- 186
Query: 281 TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHA 340
+ N ++ + +V AAG W+ + L ++IP++PRKGH++V +
Sbjct: 187 -TTNGTFTAQQVVNAAGVWAPKIGQML------NVNIPIEPRKGHIIVASRQQHVGCRKV 239
Query: 341 SMEAGYV-----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
ME GY+ G + + +G L T + N ++GSSR+F GF+T +
Sbjct: 240 -MEFGYLISKFGGKRKVDALTEK--YGVALVFEPTESQ----NFLIGSSREFVGFHTRIN 292
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A
Sbjct: 293 NEVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAA 346
Query: 456 GHEGLGLSLALGTAELVADMV 476
GHEG G+SLA T +++ +++
Sbjct: 347 GHEGDGISLAAVTGKVIEELL 367
>gi|386825623|ref|ZP_10112744.1| FAD dependent oxidoreductase [Serratia plymuthica PRI-2C]
gi|386377495|gb|EIJ18311.1| FAD dependent oxidoreductase [Serratia plymuthica PRI-2C]
Length = 374
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 184/416 (44%), Gaps = 60/416 (14%)
Query: 76 SSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTP 135
+ RC + I+IGAGIIG A +L V +VD P GAT AG G++ + P
Sbjct: 3 TGRC--AEAIVIGAGIIGAACAWRL-AQEGHRVLLVDNQRP--GATAAGMGHLVCMDDNP 57
Query: 136 GSEIWDLALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
+LAL S +LW+ + D + + W+ G+L + +E+ + + +++
Sbjct: 58 A----ELALSAYSLQLWRDVVDRMPES-------CAWRGCGTLWLAEREDEMAIAELKLR 106
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
++ E G+ +E L + + + EP L G + +P D + Y R +
Sbjct: 107 RMAEYGVLSETLGAEQVTRLEPMLRPGL-AGGLRVPGDG-------IVYAPNVARWLQTD 158
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
A + + E + V + + +V+A G + L+ L
Sbjct: 159 AGAA------IGVVAGEAVMLEDQTVVLASGERLTAPVVVLACGLQADRLLAQPL----- 207
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QILSISMTAT 372
+K +KGHL + + + ++ H +E GY G H S++
Sbjct: 208 -----LKAKKGHLAITDRYPR-QVRHQLVELGY----------GASAHACDGTSVAFNVQ 251
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G L++GSSRQF +T+++ I+ + RA F P L L + + GLR
Sbjct: 252 ARPTGQLLIGSSRQFGTLDTDIDMPILAAMLARAQTFLPALAQLNII------RCWTGLR 305
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
DG P++GP P S ++LA GHEGLG++ ALG+A L+A + + +D P+
Sbjct: 306 AASADGLPLLGPHPQHSWLWLALGHEGLGVTTALGSAALIAAQIQNHRPAIDDTPY 361
>gi|423402468|ref|ZP_17379641.1| hypothetical protein ICW_02866 [Bacillus cereus BAG2X1-2]
gi|423476835|ref|ZP_17453550.1| hypothetical protein IEO_02293 [Bacillus cereus BAG6X1-1]
gi|401650740|gb|EJS68309.1| hypothetical protein ICW_02866 [Bacillus cereus BAG2X1-2]
gi|402433142|gb|EJV65197.1| hypothetical protein IEO_02293 [Bacillus cereus BAG6X1-1]
Length = 391
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 174/380 (45%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRHDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKEMKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L +++P++PRKGH++V + ME
Sbjct: 190 ET-FTAKQVVNAAGVWAPKIGQML------DVNVPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F G +T +
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGMHTRINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|229133723|ref|ZP_04262549.1| Sarcosine oxidase, beta subunit [Bacillus cereus BDRD-ST196]
gi|423668488|ref|ZP_17643517.1| hypothetical protein IKO_02185 [Bacillus cereus VDM034]
gi|423675385|ref|ZP_17650324.1| hypothetical protein IKS_02928 [Bacillus cereus VDM062]
gi|228649758|gb|EEL05767.1| Sarcosine oxidase, beta subunit [Bacillus cereus BDRD-ST196]
gi|401301692|gb|EJS07279.1| hypothetical protein IKO_02185 [Bacillus cereus VDM034]
gi|401308409|gb|EJS13804.1| hypothetical protein IKS_02928 [Bacillus cereus VDM062]
Length = 391
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 174/380 (45%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S L L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQNLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + E GL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEVGLPFRMLDRQDIKEESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKEVKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T++
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|423396675|ref|ZP_17373876.1| hypothetical protein ICU_02369 [Bacillus cereus BAG2X1-1]
gi|401651251|gb|EJS68816.1| hypothetical protein ICU_02369 [Bacillus cereus BAG2X1-1]
Length = 392
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 175/379 (46%), Gaps = 50/379 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 30 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 81
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + E GL L D+ +AE +
Sbjct: 82 FEYRAPGSILVCESDEEMEAAQQWVDRQKEVGLPFRMLDRQDI-RAESPFFADDLLGGLE 140
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + + F +K F H V + R N G V+T+ T +
Sbjct: 141 CATDSTVNPYLLAFSLLAEAKKFGAKA----FNHTEVKEMKR-NIDGSF-IVETTNGT-F 193
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVL---ENFNSLKLNHASMEA 344
+ K +V AAG W+ + L + IP++PRKGH++V ++ S K+ ME
Sbjct: 194 TAKQVVNAAGVWAPKIGQML------DVHIPIEPRKGHIIVASRQQHVGSRKV----MEF 243
Query: 345 GYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
GY+ ++ G+ +G L T + N ++GSSR+F GF+T++
Sbjct: 244 GYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNE 295
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GH
Sbjct: 296 VIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGH 349
Query: 458 EGLGLSLALGTAELVADMV 476
EG G+SLA T +++ +++
Sbjct: 350 EGDGISLAAVTGKVIEELL 368
>gi|423419163|ref|ZP_17396252.1| hypothetical protein IE3_02635 [Bacillus cereus BAG3X2-1]
gi|401105769|gb|EJQ13736.1| hypothetical protein IE3_02635 [Bacillus cereus BAG3X2-1]
Length = 391
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 176/380 (46%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S L L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQNLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V ++ + G V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLTESKKFGTKA----FNHTEVK-EIKIDIDGSF-IVETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T++
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|307727296|ref|YP_003910509.1| FAD dependent oxidoreductase [Burkholderia sp. CCGE1003]
gi|307587821|gb|ADN61218.1| FAD dependent oxidoreductase [Burkholderia sp. CCGE1003]
Length = 375
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 184/419 (43%), Gaps = 68/419 (16%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T D +I+GAGI+G A +L G + V V+D GAT AG G+I +++ +P
Sbjct: 2 TADALIVGAGIVGAACAAEL-AGLGMRVEVLDAQGIGGGATAAGMGHIVVMNDSPA---- 56
Query: 141 DLALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA 198
+LAL S +LW LA LR + + + G+L + EE
Sbjct: 57 ELALSHYSRELWLELAPQLRARD-------AFARCGTLWLAADEEEWQAACAMHAAYQAH 109
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE 258
G+ A+ L + L +AEP + A++ IE + +A
Sbjct: 110 GVAAQLLDAPALREAEPAVAA----------------ALVGGLRIEHDSIVYAPTAAEWL 153
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTLY-----SKKAIVVAAGCWSGSLMHDLLRETEI 313
P + S V V S TL S ++VA G + E+
Sbjct: 154 LTRSPAAANISVRSGAAVVRVDASSATLANGERRSAVHVIVANG----------MGAREL 203
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
+ +P++P+KGHLL+ + + L ++H +E GY+ +H S++ A
Sbjct: 204 IAALPLQPKKGHLLITDRYPEL-IHHQLLELGYIK---------SAHHASGTSVAFNAQP 253
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
G +++GSSRQF + VE ++ R+ +RAA + P L L + G R
Sbjct: 254 RPTGQVLVGSSRQFDSTDPAVEMPVLARMLQRAAHYLPMLPQL------HGIRAWTGFRA 307
Query: 434 YMPDGKPVIGP----VPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P+IG PG V+LA GHEGLG++ +L TA+L+A ++ + + P+
Sbjct: 308 ASPDGLPLIGAAGECAPG---VWLAVGHEGLGVTTSLATAKLLAAQIVGSAAAIAVEPY 363
>gi|229185051|ref|ZP_04312240.1| Sarcosine oxidase, beta subunit [Bacillus cereus BGSC 6E1]
gi|376266698|ref|YP_005119410.1| D-amino-acid oxidase [Bacillus cereus F837/76]
gi|228598411|gb|EEK56042.1| Sarcosine oxidase, beta subunit [Bacillus cereus BGSC 6E1]
gi|364512498|gb|AEW55897.1| D-amino-acid oxidase [Bacillus cereus F837/76]
Length = 391
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 172/376 (45%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----INHTEVKEMKRDKDGSFI--VETTNGT-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ G+ +G L T + N ++GSSR+F GF+T++ +I
Sbjct: 246 ----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPDYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|30262804|ref|NP_845181.1| glycine oxidase [Bacillus anthracis str. Ames]
gi|47528128|ref|YP_019477.1| glycine oxidase [Bacillus anthracis str. 'Ames Ancestor']
gi|49185651|ref|YP_028903.1| glycine oxidase [Bacillus anthracis str. Sterne]
gi|65320127|ref|ZP_00393086.1| COG0665: Glycine/D-amino acid oxidases (deaminating) [Bacillus
anthracis str. A2012]
gi|165868365|ref|ZP_02213025.1| putative glycine oxidase [Bacillus anthracis str. A0488]
gi|167632703|ref|ZP_02391030.1| putative glycine oxidase [Bacillus anthracis str. A0442]
gi|167637660|ref|ZP_02395939.1| putative glycine oxidase [Bacillus anthracis str. A0193]
gi|170685382|ref|ZP_02876606.1| putative glycine oxidase [Bacillus anthracis str. A0465]
gi|170704872|ref|ZP_02895338.1| putative glycine oxidase [Bacillus anthracis str. A0389]
gi|177649661|ref|ZP_02932663.1| putative glycine oxidase [Bacillus anthracis str. A0174]
gi|227814353|ref|YP_002814362.1| putative glycine oxidase [Bacillus anthracis str. CDC 684]
gi|229604724|ref|YP_002867108.1| putative glycine oxidase [Bacillus anthracis str. A0248]
gi|254685397|ref|ZP_05149257.1| putative glycine oxidase [Bacillus anthracis str. CNEVA-9066]
gi|254737854|ref|ZP_05195557.1| putative glycine oxidase [Bacillus anthracis str. Western North
America USA6153]
gi|254742974|ref|ZP_05200659.1| putative glycine oxidase [Bacillus anthracis str. Kruger B]
gi|254752169|ref|ZP_05204206.1| putative glycine oxidase [Bacillus anthracis str. Vollum]
gi|254760687|ref|ZP_05212711.1| putative glycine oxidase [Bacillus anthracis str. Australia 94]
gi|386736577|ref|YP_006209758.1| Glycine oxidase [Bacillus anthracis str. H9401]
gi|421510265|ref|ZP_15957161.1| Glycine oxidase [Bacillus anthracis str. UR-1]
gi|421636622|ref|ZP_16077221.1| Glycine oxidase [Bacillus anthracis str. BF1]
gi|30257437|gb|AAP26667.1| putative glycine oxidase [Bacillus anthracis str. Ames]
gi|47503276|gb|AAT31952.1| putative glycine oxidase [Bacillus anthracis str. 'Ames Ancestor']
gi|49179578|gb|AAT54954.1| glycine oxidase, putative [Bacillus anthracis str. Sterne]
gi|164715091|gb|EDR20608.1| putative glycine oxidase [Bacillus anthracis str. A0488]
gi|167514209|gb|EDR89576.1| putative glycine oxidase [Bacillus anthracis str. A0193]
gi|167533001|gb|EDR95637.1| putative glycine oxidase [Bacillus anthracis str. A0442]
gi|170130673|gb|EDS99534.1| putative glycine oxidase [Bacillus anthracis str. A0389]
gi|170670742|gb|EDT21481.1| putative glycine oxidase [Bacillus anthracis str. A0465]
gi|172084735|gb|EDT69793.1| putative glycine oxidase [Bacillus anthracis str. A0174]
gi|227004464|gb|ACP14207.1| putative glycine oxidase [Bacillus anthracis str. CDC 684]
gi|229269132|gb|ACQ50769.1| putative glycine oxidase [Bacillus anthracis str. A0248]
gi|384386429|gb|AFH84090.1| Glycine oxidase [Bacillus anthracis str. H9401]
gi|401819721|gb|EJT18895.1| Glycine oxidase [Bacillus anthracis str. UR-1]
gi|403397150|gb|EJY94387.1| Glycine oxidase [Bacillus anthracis str. BF1]
Length = 391
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 172/376 (45%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + P + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPRFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ N +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDKDGSFI--VETT-NKTF 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ G+ +G L T + N ++GSSR+F GF+T++ +I
Sbjct: 246 ----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|254722806|ref|ZP_05184594.1| putative glycine oxidase [Bacillus anthracis str. A1055]
Length = 391
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 172/376 (45%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + P + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPRFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDKDGSFI--VETTNET-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ G+ +G L T + N ++GSSR+F GF+T++ +I
Sbjct: 246 ----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|355645584|ref|ZP_09054175.1| hypothetical protein HMPREF1030_03261 [Pseudomonas sp. 2_1_26]
gi|354828808|gb|EHF12912.1| hypothetical protein HMPREF1030_03261 [Pseudomonas sp. 2_1_26]
Length = 371
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 183/410 (44%), Gaps = 60/410 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGI+G A +L L V V+D GAT G G++ + P +L
Sbjct: 4 EVIVVGAGIVGSACAHEL-ARRGLDVLVLDSRR--GGATAVGMGHLVAMDDNPA----EL 56
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S + W+ A L + ++ G+L + EL + + + L AG+
Sbjct: 57 ALSDYSIQAWRTWAADLPED-------CAYRNCGTLWLAADAAELAEAERKRQALLAAGV 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E L ++ L EP L G + A +P D L A A ++ G
Sbjct: 110 ACEMLDAARLRDLEPVLRPGL-AGALKVPGDGILYAPNAARWL------LERAGPRLRRL 162
Query: 261 HDPVTCLLRSNSTGEVEA--VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
H V+ EV+ ++ + S +A+V+A G +G E+ ++P
Sbjct: 163 HAEVS---------EVDGSRLRLADGRWLSAEALVLANGIHAG----------ELCAELP 203
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + L H +E GYV + S++ A G
Sbjct: 204 IRPKKGHLLITDRYPG-TLRHQLVELGYVS---------SAHASSGTSVAFNAQPRPTGQ 253
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+ LGSSRQF + +VE ++ R+ +RA ++ P L L + + G R PDG
Sbjct: 254 VFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGL------NAIRAWTGFRAATPDG 307
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++G P ++LA GHEGLG++ A G+A L+A + +D P+
Sbjct: 308 LPLLGEHPAQPGLWLAVGHEGLGVTTAPGSARLLAAQLFGETPPLDPTPY 357
>gi|299534428|ref|ZP_07047761.1| glycine oxidase [Lysinibacillus fusiformis ZC1]
gi|424739863|ref|ZP_18168279.1| glycine oxidase [Lysinibacillus fusiformis ZB2]
gi|298730056|gb|EFI70598.1| glycine oxidase [Lysinibacillus fusiformis ZC1]
gi|422946598|gb|EKU41006.1| glycine oxidase [Lysinibacillus fusiformis ZB2]
Length = 393
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 173/375 (46%), Gaps = 38/375 (10%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L + V++K SG + G I + + PG + ++L S +L L L +
Sbjct: 29 LEITVLEKNELASGTSSRCDGNILAIDKDPGFD-SQMSLVSQQLVHDLDKDLEIK----- 82
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
++ GS+L+ + E+ ++ V + +AGL + L +DL + E + +
Sbjct: 83 --FEYRNPGSILVCESEVEMEAAQQWVTRQKQAGLDFKMLDRADL-RNESKFFADDLYGG 139
Query: 226 AFLPYDSQLDA-MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKN 284
DS ++ ML + + A+ ++ E +++ S G + T+
Sbjct: 140 LECKTDSTVNPYMLTFSMFHSAEKLGANIRKHTEVR------MIKKQSDGTF-LIDTNVE 192
Query: 285 TLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEA 344
T+ + K ++ A G W+ S+ L +DIP++PRKGHL+V + L ME
Sbjct: 193 TMTANK-VINACGIWAPSIGQML------GIDIPIQPRKGHLIVASRQEPVGLRKV-MEF 244
Query: 345 GYVGHH---DLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDR 401
GY+ + + +G L T N ++GSSRQF GF+T+V ++
Sbjct: 245 GYLISKFGGERMVDADIEKYGVALVFEPTEAQ----NFLIGSSRQFVGFDTKVNHDVVKM 300
Query: 402 IWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLG 461
I +RA FYPK+ D+ + + GLRP+ D P+I V + ++A GHEG G
Sbjct: 301 IARRAMRFYPKIADMSII------RTYCGLRPWTEDHLPIICEVEQVPGFYIAAGHEGDG 354
Query: 462 LSLALGTAELVADMV 476
+SLA T +LV +++
Sbjct: 355 ISLAAVTGKLVQELL 369
>gi|83716292|ref|YP_440254.1| FAD-binding oxidoreductase [Burkholderia thailandensis E264]
gi|257140882|ref|ZP_05589144.1| oxidoreductase, FAD-binding family protein [Burkholderia
thailandensis E264]
gi|83650117|gb|ABC34181.1| oxidoreductase, FAD-binding family protein [Burkholderia
thailandensis E264]
Length = 377
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 182/408 (44%), Gaps = 55/408 (13%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
DV++IGAGI+G A + L V VVD C GAT AG G+ +V +
Sbjct: 6 IDVVVIGAGIVGAACAHEF-AQRGLRVTVVDD--GCGGATAAGMGH--LVAMDDNAAELA 60
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
L S LW+ L D++ + ++ G+L + E+ + + + L E G+
Sbjct: 61 LTHYSIGLWRALRDAMPEG-------CAYRNCGTLWLAADAHEMDLARAKQAALAEHGVA 113
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E + + L EP M+ D A + D L A +A ++ +
Sbjct: 114 GELIDRAALAALEP--MLRADLGGALKVSGDGILYAPVAAHWL---------------LH 156
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
P L R+ + A+ ++ L + + A ++ + + E+V ++P++
Sbjct: 157 RLPGVALRRAKAV----AIDGARVALENGDVLRADA-----VVVANGVAARELVPELPLR 207
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + + +++H +E GY + S++ G L+
Sbjct: 208 PKKGHLLITDRYPA-QVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLL 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF + VE ++ R+ +RA + P L + + + G R PDG P
Sbjct: 258 IGSSRQFDTEDPRVEAPVLARMLRRALGYLPALAGM------NGIRAWTGFRAASPDGLP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
++G P ++LA GHEGLG++ A G A ++A ++ +D+ P+
Sbjct: 312 LLGEHPSRRGLWLAVGHEGLGVTTAPGGARVLAALMFGERAAIDAGPY 359
>gi|30020955|ref|NP_832586.1| sarcosine oxidase beta subunit [Bacillus cereus ATCC 14579]
gi|29896508|gb|AAP09787.1| Sarcosine oxidase beta subunit [Bacillus cereus ATCC 14579]
Length = 391
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 173/379 (45%), Gaps = 50/379 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HA 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTS 282
DS ++ L + + F +K F V + + +N + VE +
Sbjct: 141 AT-----DSTVNPYLLAFSLLSEAQKFGAKA----FKQTEVKSINIDTNGSFVVE----T 187
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
N ++ + +V AAG W+ + L ++IP++PRKGH++V + M
Sbjct: 188 TNGTFTAQQVVNAAGVWAPKIGQML------NVNIPIEPRKGHIIVASRQQHVGCRKV-M 240
Query: 343 EAGYV-----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
E GY+ G + + +G L T + N ++GSSR+F GF+T +
Sbjct: 241 EFGYLISKFGGKRKVDALTEK--YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNE 294
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GH
Sbjct: 295 VIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGH 348
Query: 458 EGLGLSLALGTAELVADMV 476
EG G+SLA T +++ +++
Sbjct: 349 EGDGISLAAVTGKVIEELL 367
>gi|423424961|ref|ZP_17401992.1| hypothetical protein IE5_02650 [Bacillus cereus BAG3X2-2]
gi|423506450|ref|ZP_17483040.1| hypothetical protein IG1_04014 [Bacillus cereus HD73]
gi|449089800|ref|YP_007422241.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|401113733|gb|EJQ21602.1| hypothetical protein IE5_02650 [Bacillus cereus BAG3X2-2]
gi|402447891|gb|EJV79740.1| hypothetical protein IG1_04014 [Bacillus cereus HD73]
gi|449023557|gb|AGE78720.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 391
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 173/379 (45%), Gaps = 50/379 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQQEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTS 282
DS ++ L + + F +K F V + + ++ + VE +
Sbjct: 141 AT-----DSTVNPYLLAFSLLSEAQKFGAKA----FKQTEVKSMEIETDGSFVVE----T 187
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
N ++ K +V AAG W+ + L ++IP++PRKGH++V + M
Sbjct: 188 TNGTFTAKQVVNAAGVWAPKIGQML------NINIPIEPRKGHIIVASRQQHVGCRKV-M 240
Query: 343 EAGYV-----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
E GY+ G + + +G L T + N ++GSSR+F GF+T +
Sbjct: 241 EFGYLISKFGGKRKVDALTEK--YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNE 294
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GH
Sbjct: 295 VIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGH 348
Query: 458 EGLGLSLALGTAELVADMV 476
EG G+SLA T +++ +++
Sbjct: 349 EGDGISLAAVTGKVIEELL 367
>gi|229110286|ref|ZP_04239859.1| Sarcosine oxidase, beta subunit [Bacillus cereus Rock1-15]
gi|423586742|ref|ZP_17562829.1| hypothetical protein IIE_02154 [Bacillus cereus VD045]
gi|228673151|gb|EEL28422.1| Sarcosine oxidase, beta subunit [Bacillus cereus Rock1-15]
gi|401230260|gb|EJR36768.1| hypothetical protein IIE_02154 [Bacillus cereus VD045]
Length = 391
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 173/379 (45%), Gaps = 50/379 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTS 282
DS ++ L + + F +K F V + + +N + VE +
Sbjct: 141 AT-----DSTVNPYLLAFSLLSEAQKFGTKA----FKQTEVKSINIDTNGSFVVE----T 187
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
N ++ + +V AAG W+ + L ++IP++PRKGH++V + M
Sbjct: 188 TNGTFTAQQVVNAAGVWAPKIGQML------NINIPIEPRKGHIIVASRQQHVGCRKV-M 240
Query: 343 EAGYV-----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
E GY+ G + + +G L T + N ++GSSR+F GF+T +
Sbjct: 241 EFGYLISKFGGKRKVDALTEK--YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNE 294
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GH
Sbjct: 295 VIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGH 348
Query: 458 EGLGLSLALGTAELVADMV 476
EG G+SLA T +++ +++
Sbjct: 349 EGDGISLAAVTGKVIEELL 367
>gi|157370083|ref|YP_001478072.1| FAD dependent oxidoreductase [Serratia proteamaculans 568]
gi|157321847|gb|ABV40944.1| FAD dependent oxidoreductase [Serratia proteamaculans 568]
Length = 374
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 186/409 (45%), Gaps = 58/409 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D I++GAGIIG A +L L V +VD +GAT AG G++ + P +L
Sbjct: 8 DAIVVGAGIIGAACAWRL-AQQGLQVLLVDNQR--AGATAAGMGHLVCMDDNPA----EL 60
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S +LW+ L D L + W+ G+L + +E+ + + + +++ E G+
Sbjct: 61 ALSAYSLQLWRSLVDRLPEG-------CAWRGCGTLWLAERDDEMAVAEAKRQRMAEYGV 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
+E L+++ + EP L G +P D + Y R + +
Sbjct: 114 TSETLNTAQVAVLEPMLRPGLVG-GLRVPGDG-------IVYAPNVARWLVADAGPS--- 162
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
+ ++ T E +A+ + + A+V+A G L D L E ++ +
Sbjct: 163 ---IRVIVGEAVTLEQQALLLASGERLTAPAVVLACG-----LQADRLLEQPLL-----R 209
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGNL 379
+KGHL + + + +++H +E GY G H S++ G L
Sbjct: 210 AKKGHLAITDRYPQ-RVHHQLVELGY----------GASAHASDGTSVAFNVQARPTGQL 258
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++GSSRQF ++ ++ ++ + RA F P L + + + GLR DG
Sbjct: 259 LIGSSRQFDTPDSTIDMPLLAAMLTRATTFLPALAQMNII------RCWTGLRAASADGL 312
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++GP P ++LA GHEGLG++ ALG+A L+A + + ++D P+
Sbjct: 313 PLLGPHPQHRWLWLALGHEGLGVTTALGSAALIAAQIHNHRPEIDDTPY 361
>gi|423655628|ref|ZP_17630927.1| hypothetical protein IKG_02616 [Bacillus cereus VD200]
gi|401292376|gb|EJR98035.1| hypothetical protein IKG_02616 [Bacillus cereus VD200]
Length = 391
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 173/379 (45%), Gaps = 50/379 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HA 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTS 282
DS ++ L + + F +K F V + + +N + VE +
Sbjct: 141 AT-----DSTVNPYLLAFSLLSEAQKFGAKA----FKQTEVKSINIDTNGSFVVE----T 187
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
N ++ + +V AAG W+ + L ++IP++PRKGH++V + M
Sbjct: 188 TNGTFTAQQVVNAAGVWAPKIGQML------NVNIPIEPRKGHIIVASRQQHVGCRKV-M 240
Query: 343 EAGYV-----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
E GY+ G + + +G L T + N ++GSSR+F GF+T +
Sbjct: 241 EFGYLISKFGGKRKVDALTEK--YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNE 294
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GH
Sbjct: 295 VIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGH 348
Query: 458 EGLGLSLALGTAELVADMV 476
EG G+SLA T +++ +++
Sbjct: 349 EGDGISLAAVTGKVIEELL 367
>gi|330810049|ref|YP_004354511.1| FAD-dependent oxidoreductase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327378157|gb|AEA69507.1| putative FAD-dependent oxidoreductase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 371
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 172/395 (43%), Gaps = 57/395 (14%)
Query: 99 QLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKL--WKMLADS 156
Q L +++V V+D GAT AG G++ ++ P +LAL L W+ LA +
Sbjct: 23 QALARRNVNVLVLD--AGWHGATAAGMGHLLVLDDNPA----ELALSQYSLQRWRELAPA 76
Query: 157 LRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPE 216
L D W+ G+L + EE+ + + L G E + + L Q EPE
Sbjct: 77 LPDG-------CAWRNNGTLWLAANAEEMAVAHSKYLNLLAHGEACELIGHAALHQREPE 129
Query: 217 LMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
L G + + D L A A ++ + + + +E +
Sbjct: 130 LRPGLEG-GLLIKGDGILYAPAAARWMLEAPNIRQQRAQVSEV---------------DG 173
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
V+ S +A+++A G ++ TE+ ++P+ P+KGHLL+ + + +
Sbjct: 174 HRVRLDDGRWLSAEAVILANG----------IQATELCPELPIVPKKGHLLITDRYPA-T 222
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
+ H +E GYV ++ S++ G L +G+SRQF + +VE
Sbjct: 223 VTHTLVELGYVT---------SAHNASGPSVACNIQPRPTGQLFIGASRQFGTLDPQVEG 273
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
++ ++ KRA ++ P L L + + G R PDG P++G P ++LA G
Sbjct: 274 WMLAKMLKRAVDYLPGLAHL------NGIRAWTGFRAASPDGLPLVGQHPQRQGLWLAVG 327
Query: 457 HEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
HEGLG++ A TA+L+ + + + P+ Q
Sbjct: 328 HEGLGVTTAPATADLLVAQLFDETPPLAAQPYLPQ 362
>gi|229060508|ref|ZP_04197871.1| Sarcosine oxidase, beta subunit [Bacillus cereus AH603]
gi|228718891|gb|EEL70512.1| Sarcosine oxidase, beta subunit [Bacillus cereus AH603]
Length = 391
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 52/380 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + E GL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEVGLPFRMLDRKDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFSLLAESKKFGAKV----FNHTEVKEMKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L + IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVTIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ G+ +G L T + N ++GSSR+F GF+T +
Sbjct: 242 FGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAG 347
Query: 457 HEGLGLSLALGTAELVADMV 476
HEG G+SLA T +++ +++
Sbjct: 348 HEGDGISLAAVTGKVIEELL 367
>gi|229145412|ref|ZP_04273799.1| Sarcosine oxidase, beta subunit [Bacillus cereus BDRD-ST24]
gi|296503370|ref|YP_003665070.1| sarcosine oxidase subunit beta [Bacillus thuringiensis BMB171]
gi|228638039|gb|EEK94482.1| Sarcosine oxidase, beta subunit [Bacillus cereus BDRD-ST24]
gi|296324422|gb|ADH07350.1| sarcosine oxidase beta subunit [Bacillus thuringiensis BMB171]
Length = 391
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 173/379 (45%), Gaps = 50/379 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTS 282
DS ++ L + + F +K F V + + +N + VE +
Sbjct: 141 AT-----DSTVNPYLLAFSLLSEAQKFGAKA----FKQTEVKSINIDTNGSFVVE----T 187
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
N ++ + +V AAG W+ + L ++IP++PRKGH++V + M
Sbjct: 188 TNGTFTAQQVVNAAGVWAPKIGQML------NINIPIEPRKGHIIVASRQQHVGCRKV-M 240
Query: 343 EAGYV-----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
E GY+ G + + +G L T + N ++GSSR+F GF+T +
Sbjct: 241 EFGYLISKFGGKRKVDALTEK--YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNE 294
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GH
Sbjct: 295 VIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGH 348
Query: 458 EGLGLSLALGTAELVADMV 476
EG G+SLA T +++ +++
Sbjct: 349 EGDGISLAAVTGKVIEELL 367
>gi|322433092|ref|YP_004210341.1| FAD dependent oxidoreductase [Granulicella tundricola MP5ACTX9]
gi|321165319|gb|ADW71023.1| FAD dependent oxidoreductase [Granulicella tundricola MP5ACTX9]
Length = 377
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 193/414 (46%), Gaps = 61/414 (14%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
FDV+I+GAGI+G AR+ V + VA+V+ VP GAT AG G++ ++ +P
Sbjct: 4 FDVVIVGAGIVGSACAREC-VRAGFRVAIVEGGVPAGGATAAGMGHVVVMDDSPAQ--LA 60
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
L S LW L + + ++ G++ + EE+V + + G+
Sbjct: 61 LTTYSRGLWNAELPELP-------RTVEYEARGTIWVAADDEEMVEVHAKQATYERVGVC 113
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRY--AEF 259
AE L S+DL EP L G + +P D V Y + + S+ R AEF
Sbjct: 114 AEVLDSTDLATQEPNLRSGL-AGGLLVPDDG-------VIYPPAAAQFYLSEARRLGAEF 165
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
+ L R+ S V + T + IV+A G E +++ +P+
Sbjct: 166 H------LSRAISAAN-GVVLLADGTRLTAPHIVLAVGT-----------ECDLLPALPI 207
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYV--GHHDLTLHPGQVNHGQILSISMTATTDVIG 377
K RKGHL++ + + + L+H +E GY+ H +T S++ G
Sbjct: 208 KKRKGHLIITDRYPNF-LHHQLVELGYLKSAHKVVTD-----------SVAFNIQPRQTG 255
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
L++GSSRQ+ + + ++ ++ +R+ + P L + IS +V G R D
Sbjct: 256 QLLIGSSRQYGDEDPRADAAVLRQMLERSMLYMPALAN------ISALRVWTGFRASTAD 309
Query: 438 GKPVIGPVPGLS---KVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P+IGP GLS ++LA G EGLG++ A G A L+ D +L + ++D++P+
Sbjct: 310 KLPLIGPAAGLSDDKSLWLAAGFEGLGITNAPGAARLLVDGLLGHASQIDASPY 363
>gi|423407527|ref|ZP_17384676.1| hypothetical protein ICY_02212 [Bacillus cereus BAG2X1-3]
gi|401658853|gb|EJS76342.1| hypothetical protein ICY_02212 [Bacillus cereus BAG2X1-3]
Length = 392
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 30 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 81
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + E GL L D+ +AE +
Sbjct: 82 FEYRAPGSILVCESDEEMEAAQQWVDRQKEVGLPFRMLDRQDI-RAESPFFADDLLGGLE 140
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + + F +K F H V + R + V+T+ T +
Sbjct: 141 CATDSTVNPYLLAFSLLAEAKKFGAKA----FNHTEVKEMKRDIDGSFI--VETTNGT-F 193
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L + IP++PRKGH++V + + ME GY+
Sbjct: 194 TAKQVVNAAGVWAPKIGQML------DVHIPIEPRKGHIIVASRQQHVG-SRKVMEFGYL 246
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ G+ +G L T + N ++GSSR+F GF+T++ +I
Sbjct: 247 ----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTKINNEVIK 298
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 299 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGD 352
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 353 GISLAAVTGKVIEELL 368
>gi|228953170|ref|ZP_04115226.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228806495|gb|EEM53058.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 410
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 174/381 (45%), Gaps = 54/381 (14%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 48 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 99
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 100 FEYRAPGSILVCESDEEMEAAQQWVNRQQEAGLPFRMLDRQDIREESPFFADDLLGGLEC 159
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTS 282
DS ++ L + + F +K F V + + ++ + VE +
Sbjct: 160 AT-----DSTVNPYLLAFSLLSEAQKFGAKA----FKQTEVKSMEIETDGSFVVE----T 206
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
N ++ K +V AAG W+ + L ++IP++PRKGH++V + M
Sbjct: 207 TNGTFTAKQVVNAAGVWAPKIGQML------NINIPIEPRKGHIIVASRQQHVGCRKV-M 259
Query: 343 EAGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
E GY+ ++ G+ +G L T + N ++GSSR+F GF+T +
Sbjct: 260 EFGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRIN 311
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A
Sbjct: 312 NEVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAA 365
Query: 456 GHEGLGLSLALGTAELVADMV 476
GHEG G+SLA T +++ +++
Sbjct: 366 GHEGDGISLAAVTGKVIEELL 386
>gi|423627906|ref|ZP_17603655.1| hypothetical protein IK5_00758 [Bacillus cereus VD154]
gi|401270463|gb|EJR76484.1| hypothetical protein IK5_00758 [Bacillus cereus VD154]
Length = 391
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 173/379 (45%), Gaps = 50/379 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTS 282
DS ++ L + + F +K F V + + +N + VE +
Sbjct: 141 AT-----DSTVNPYLLAFSLLSEAQKFGAKA----FKQTEVKSINIDTNGSFVVE----T 187
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
N ++ + +V AAG W+ + L ++IP++PRKGH++V + M
Sbjct: 188 TNGTFTAQQVVNAAGVWAPKIGQML------NVNIPIEPRKGHIIVASRQQHVGCRKV-M 240
Query: 343 EAGYV-----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
E GY+ G + + +G L T + N ++GSSR+F GF+T +
Sbjct: 241 EFGYLISKFGGKRKVDALTEK--YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNE 294
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GH
Sbjct: 295 VIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGH 348
Query: 458 EGLGLSLALGTAELVADMV 476
EG G+SLA T +++ +++
Sbjct: 349 EGDGISLAAVTGKVIEELL 367
>gi|190565674|ref|ZP_03018594.1| putative glycine oxidase [Bacillus anthracis str. Tsiankovskii-I]
gi|190563701|gb|EDV17666.1| putative glycine oxidase [Bacillus anthracis str. Tsiankovskii-I]
Length = 391
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 170/372 (45%), Gaps = 36/372 (9%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + P + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPRFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ +AE +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDI-RAESPFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ + +K F H V + R + V+T+ N +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKYGTKA----FNHTEVKEMKRDKDGSFI--VETT-NKTF 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L ++IP++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQVNHGQILS---ISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWK 404
++ G+ + ++ N ++GSSR+F GF+T++ +I I
Sbjct: 246 ----ISKFGGKRKVDALTEKYGVAFVFEPTESQNFLIGSSREFVGFHTKINNEVIKCIAN 301
Query: 405 RAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG G+SL
Sbjct: 302 RAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGDGISL 355
Query: 465 ALGTAELVADMV 476
A T +++ +++
Sbjct: 356 AAVTGKVIEELL 367
>gi|228908581|ref|ZP_04072420.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis IBL 200]
gi|228851046|gb|EEM95861.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis IBL 200]
Length = 391
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 172/379 (45%), Gaps = 50/379 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKEPGFD-SQMSLVSQKLVTDLSEKLE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + +AGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKQAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTS 282
DS ++ L + + F +K F V + + +N + VE +
Sbjct: 141 AT-----DSTVNPYLLAFSLLSEAQKFGAKA----FKQTKVKSMEIETNGSFFVE----T 187
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
N ++ K +V AAG W+ + L ++IP+ PRKGH++V + M
Sbjct: 188 TNGTFTAKQVVNAAGVWAPKIGQML------DINIPIAPRKGHIIVASRQQHVGCRKV-M 240
Query: 343 EAGYV-----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
E GY+ G + + +G L T + N ++GSSR+F GF+T +
Sbjct: 241 EFGYLISKFGGKRKVDALTEK--YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNE 294
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GH
Sbjct: 295 VIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGH 348
Query: 458 EGLGLSLALGTAELVADMV 476
EG G+SLA T +++ +++
Sbjct: 349 EGDGISLAAVTGKVIEELL 367
>gi|390572585|ref|ZP_10252789.1| FAD dependent oxidoreductase [Burkholderia terrae BS001]
gi|389935457|gb|EIM97381.1| FAD dependent oxidoreductase [Burkholderia terrae BS001]
Length = 375
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 180/394 (45%), Gaps = 50/394 (12%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T DV+I+GAGI+G A +L L V V+D GAT AG G+I +++ +P +
Sbjct: 2 TADVVIVGAGIVGAACAAELAA-RGLRVTVLDAQGIGGGATAAGMGHIVVMNDSPAE--F 58
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
L+ S LW LA LR + + + G+L + EEL +E +
Sbjct: 59 ALSRYSRDLWLELAPQLRTRD-------AFARCGTLWVASDAEELDAAREMHAGFVAQDV 111
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
A+ L L E L G + + +DS + A A ++ + A
Sbjct: 112 AAQLLDEHALYDCESSLAPGM-AGGLLIGHDSIVYAPSAAQWLLTQSPGAAR-------- 162
Query: 261 HDPVTCLLRSNSTG-EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
+ L++ + + + V S IVVA G L+ E+V +P+
Sbjct: 163 ---IDVRLQAQAVAVDAQHVTLSNGERVGGAHIVVANG----------LQARELVRGLPL 209
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+P+KGHLL+ + + + H +E GY+ +H S++ A G L
Sbjct: 210 QPKKGHLLITDRYPGF-IRHQLLELGYI---------KSAHHATGTSVAFNAQPRPTGQL 259
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++GSSRQF + VE ++ ++ +RAA + P L L + + G R PDG
Sbjct: 260 LIGSSRQFDTTDAAVEMPVLAQMLQRAARYLPALPTL------NGIRAWTGFRAASPDGL 313
Query: 440 PVIGPVPGLSK-VFLATGHEGLGLSLALGTAELV 472
P+IGP G + V+LA GHEGLG++ +LGTA+L+
Sbjct: 314 PLIGPAGGTAPGVWLAVGHEGLGVTTSLGTAQLL 347
>gi|333902592|ref|YP_004476465.1| FAD dependent oxidoreductase [Pseudomonas fulva 12-X]
gi|333117857|gb|AEF24371.1| FAD dependent oxidoreductase [Pseudomonas fulva 12-X]
Length = 371
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 166/381 (43%), Gaps = 54/381 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGIIG AR+L V V+D + GAT AG G++ ++ D+
Sbjct: 8 DVIVIGAGIIGAACAREL-ARRGQQVLVIDAGL--HGATAAGMGHLLVIDDNQAE--LDI 62
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S + W+ L L D ++ G+L + +EL + + L G+R+
Sbjct: 63 SRYSVRRWRELGPQLPDD-------CAYRNNGTLWLAANEQELAAAEAKSLNLQGEGVRS 115
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E ++ L Q EP L G A LP D + A ++ R + R E
Sbjct: 116 EMIAGHRLQQLEPILRDGLHG-ALRLPDDGIVYAPNTARWLLDEQRIHQRRARVVEL--- 171
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
+ ++ ++ S A+++A G ++ E+ ++P+ P+
Sbjct: 172 ------------DGNRLRLDDDSWLSAGAVILANG----------IQAVELCPELPIAPK 209
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHLL+ + + + H E Y+ V++ S++ G L +G
Sbjct: 210 KGHLLITDRYPH-PVTHTITELSYLT---------SVHNTSGASVACNIQPRPTGQLFIG 259
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
+SRQF + EV+ ++ R+ K A + P L +L + + G R PDG P+I
Sbjct: 260 TSRQFDNDDPEVDGWLLARMLKHAVTYAPGLAEL------NGIRAWAGFRAATPDGMPLI 313
Query: 443 GPVPGLSKVFLATGHEGLGLS 463
G P ++LA GHEGLG++
Sbjct: 314 GEHPAQPGLWLAVGHEGLGVT 334
>gi|423697701|ref|ZP_17672191.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Q8r1-96]
gi|388005403|gb|EIK66670.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Q8r1-96]
Length = 371
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 171/395 (43%), Gaps = 57/395 (14%)
Query: 99 QLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKL--WKMLADS 156
Q L +++V V+D GAT AG G++ ++ P +LAL L W+ LA +
Sbjct: 23 QALARRNVNVLVLD--AGWHGATAAGMGHLLVLDDNPA----ELALSQYSLQRWRELAPA 76
Query: 157 LRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPE 216
L D W+ G+L + EE+ + + L G E + + L Q EPE
Sbjct: 77 LPDG-------CAWRNNGTLWLAANAEEMAVAHSKYLNLLAHGEACELIGHAALHQREPE 129
Query: 217 LMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
L G + + D L A A ++ + + +E +
Sbjct: 130 LRPGLEG-GLLIKGDGILYAPAAARWMLDAPNIRQQRAQVSEV---------------DG 173
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
V+ S +A+++A G ++ TE+ ++P+ P+KGHLL+ + + +
Sbjct: 174 HRVRLDDGRWLSAEAVILANG----------IQATELCPELPIVPKKGHLLITDRYPA-T 222
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
+ H +E GYV ++ S++ G L +G+SRQF + +VE
Sbjct: 223 VTHTLVELGYVT---------SAHNASGPSVACNIQPRPTGQLFIGASRQFGTLDPQVEG 273
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
++ ++ KRA ++ P L L + + G R PDG P++G P ++LA G
Sbjct: 274 WMLAKMLKRAVDYLPGLAHL------NGIRAWTGFRAASPDGLPLVGQHPQRQGLWLAVG 327
Query: 457 HEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
HEGLG++ A TA+L+ + + + P+ Q
Sbjct: 328 HEGLGVTTAPATADLLVAQLFDETPPLAAQPYLPQ 362
>gi|423581112|ref|ZP_17557223.1| hypothetical protein IIA_02627 [Bacillus cereus VD014]
gi|423636440|ref|ZP_17612093.1| hypothetical protein IK7_02849 [Bacillus cereus VD156]
gi|401215877|gb|EJR22592.1| hypothetical protein IIA_02627 [Bacillus cereus VD014]
gi|401274791|gb|EJR80760.1| hypothetical protein IK7_02849 [Bacillus cereus VD156]
Length = 391
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 177/381 (46%), Gaps = 54/381 (14%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGED- 222
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 223 -SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQ 280
+ + PY +LA + + + + F +K F V + + ++ + VE
Sbjct: 141 ATDSTVNPY------LLAFSLVSEAQK-FGAKA----FKQTEVKSMEIETDGSFVVE--- 186
Query: 281 TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHA 340
+ N ++ + +V AAG W+ + L ++IP++PRKGH++V +
Sbjct: 187 -TTNGTFTAQQVVNAAGVWAPKIGQML------NINIPIEPRKGHIIVASRQQHVGCRKV 239
Query: 341 SMEAGYV-----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
ME GY+ G + + +G L T + N ++GSSR+F GF+T +
Sbjct: 240 -MEFGYLISKFGGKRKVDALTEK--YGVALVFEPTESQ----NFLIGSSREFVGFHTRIN 292
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A
Sbjct: 293 NEVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAA 346
Query: 456 GHEGLGLSLALGTAELVADMV 476
GHEG G+SLA T +++ +++
Sbjct: 347 GHEGDGISLAAVTGKVIEELL 367
>gi|229179120|ref|ZP_04306476.1| Sarcosine oxidase, beta subunit [Bacillus cereus 172560W]
gi|228604338|gb|EEK61803.1| Sarcosine oxidase, beta subunit [Bacillus cereus 172560W]
Length = 410
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 174/381 (45%), Gaps = 54/381 (14%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 48 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 99
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 100 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 159
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTS 282
DS ++ L + + F +K F V + + ++ + VE +
Sbjct: 160 AT-----DSTVNPYLLAFSLLSEAQKFGAKA----FKQTEVKSMEIETDGSFVVE----T 206
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
N ++ K +V AAG W+ + L ++IP++PRKGH++V + M
Sbjct: 207 TNGTFTAKQVVNAAGVWAPKIGQML------NVNIPIEPRKGHIIVASRQQHVGCRKV-M 259
Query: 343 EAGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
E GY+ ++ G+ +G L T + N ++GSSR+F GF+T +
Sbjct: 260 EFGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRIN 311
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A
Sbjct: 312 NEVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAA 365
Query: 456 GHEGLGLSLALGTAELVADMV 476
GHEG G+SLA T +++ +++
Sbjct: 366 GHEGDGISLAAVTGKVIEELL 386
>gi|170696219|ref|ZP_02887352.1| FAD dependent oxidoreductase [Burkholderia graminis C4D1M]
gi|170138863|gb|EDT07058.1| FAD dependent oxidoreductase [Burkholderia graminis C4D1M]
Length = 375
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 190/419 (45%), Gaps = 68/419 (16%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T DV+I+GAGI+G A +L + V V+D GAT AG G+I +++ +P
Sbjct: 2 TADVLIVGAGIVGAACAAELAA-LGMRVEVLDAQGIGGGATAAGMGHIVVMNDSPAE--L 58
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
L+L S LW LA LR + + + G+L + EE + G+
Sbjct: 59 ALSLYSRDLWLQLAPRLRTRD-------AFARCGTLWLAADEEEWQAARAMHAAYEAHGV 111
Query: 201 RAEYLSSSDLLQAEPEL---MVG----EDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
A+ L +S L Q EP + +VG E + P ++ + A G R AS
Sbjct: 112 TAQLLDASALRQCEPAVAASLVGGLRIEHDSIVYAPTAAEWLLTQSPASANIGVRLGAS- 170
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
++ ++TG V + + ++VA G L E+
Sbjct: 171 -------------VVSVDATG----VTLANGERRGARHVIVANG----------LGAREL 203
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
V +P++P+KGHLL+ + + L ++H +E GY+ +H S++ A
Sbjct: 204 VPTLPLQPKKGHLLITDRYPEL-IHHQLLELGYIK---------SAHHATGTSVAFNAQP 253
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
G L++GSSRQF + VE ++ ++ +RAA + P L L + + G R
Sbjct: 254 RPTGQLLIGSSRQFDTTDPAVEMPVLAQMLQRAAHYLPMLPQL------NGIRAWTGFRA 307
Query: 434 YMPDGKPVIGP----VPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P+IGP PG V+LA GHEGLG++ +L TA+L+A ++ + P+
Sbjct: 308 ASPDGLPLIGPAGDAAPG---VWLAVGHEGLGVTTSLATAKLLAAQIVGETAAIPVEPY 363
>gi|423459126|ref|ZP_17435923.1| hypothetical protein IEI_02266 [Bacillus cereus BAG5X2-1]
gi|401144204|gb|EJQ51734.1| hypothetical protein IEI_02266 [Bacillus cereus BAG5X2-1]
Length = 391
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 170/376 (45%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTELSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + EAGL L D+ + E +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRHDI-REESSFFADDLLGGLE 139
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
DS ++ L + ++ F +K F H V + R + V+T+ T +
Sbjct: 140 CATDSTVNPYLLAFSLLAESKKFGTKA----FNHTEVKEMKRDIDGSFI--VETTNET-F 192
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +V AAG W+ + L +++P++PRKGH++V + ME GY+
Sbjct: 193 TAKQVVNAAGVWAPKIGQML------DINVPIEPRKGHIIVASRQQHVGCRKV-MEFGYL 245
Query: 348 GHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
++ G+ +G L T + N ++GSSR+F G +T + +I
Sbjct: 246 ----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGMHTRINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|228921505|ref|ZP_04084827.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228838124|gb|EEM83443.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 410
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 178/383 (46%), Gaps = 58/383 (15%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 48 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 99
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGED- 222
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 100 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 159
Query: 223 -SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQ 280
+ + PY +LA + + + + F +K F V + + ++ + VE
Sbjct: 160 ATDSTVNPY------LLAFSLVSEAQK-FGAKA----FKQTEVKSMEIETDGSFVVE--- 205
Query: 281 TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHA 340
+ N ++ + +V AAG W+ + L ++IP++PRKGH++V +
Sbjct: 206 -TTNGTFTAQQVVNAAGVWAPKIGQML------NINIPIEPRKGHIIVASRQQHVGCRKV 258
Query: 341 SMEAGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
ME GY+ ++ G+ +G L T + N ++GSSR+F GF+T
Sbjct: 259 -MEFGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTR 309
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ +I I RA FYPK+ D+ + + GLRP+ D P+I V + F+
Sbjct: 310 INNEVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFI 363
Query: 454 ATGHEGLGLSLALGTAELVADMV 476
A GHEG G+SLA T +++ +++
Sbjct: 364 AAGHEGDGISLAAVTGKVIEELL 386
>gi|229070312|ref|ZP_04203560.1| Sarcosine oxidase, beta subunit [Bacillus cereus F65185]
gi|423436338|ref|ZP_17413319.1| hypothetical protein IE9_02519 [Bacillus cereus BAG4X12-1]
gi|228712795|gb|EEL64722.1| Sarcosine oxidase, beta subunit [Bacillus cereus F65185]
gi|401122952|gb|EJQ30736.1| hypothetical protein IE9_02519 [Bacillus cereus BAG4X12-1]
Length = 391
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 173/379 (45%), Gaps = 50/379 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRKDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTS 282
DS ++ L + + F +K F V + + ++ + VE +
Sbjct: 141 AT-----DSTVNPYLLAFSLLSEAQKFGAKA----FKQTEVKSMEIETDGSFVVE----T 187
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
N ++ + +V AAG W+ + L ++IP++PRKGH++V + M
Sbjct: 188 TNGTFTAQQVVNAAGVWAPKIGQML------NINIPIEPRKGHIIVASRQQHVGCRKV-M 240
Query: 343 EAGYV-----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
E GY+ G + + +G L T + N ++GSSR+F GF+T +
Sbjct: 241 EFGYLISKFGGKRKVDALTEK--YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNE 294
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GH
Sbjct: 295 VIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGH 348
Query: 458 EGLGLSLALGTAELVADMV 476
EG G+SLA T +++ +++
Sbjct: 349 EGDGISLAAVTGKVIEELL 367
>gi|423413401|ref|ZP_17390521.1| hypothetical protein IE1_02705 [Bacillus cereus BAG3O-2]
gi|423430814|ref|ZP_17407818.1| hypothetical protein IE7_02630 [Bacillus cereus BAG4O-1]
gi|401101499|gb|EJQ09488.1| hypothetical protein IE1_02705 [Bacillus cereus BAG3O-2]
gi|401118891|gb|EJQ26719.1| hypothetical protein IE7_02630 [Bacillus cereus BAG4O-1]
Length = 391
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 173/379 (45%), Gaps = 50/379 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQQEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTS 282
DS ++ L + + F +K F V + + ++ + VE +
Sbjct: 141 AT-----DSTVNPYLLAFSLLSEAQKFGAKA----FKQTEVKSMEIETDGSFVVE----T 187
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
N ++ + +V AAG W+ + L ++IP++PRKGH++V + M
Sbjct: 188 TNGTFTAQQVVNAAGVWAPKIGQML------NINIPIEPRKGHIIVASRQQHVGCRKV-M 240
Query: 343 EAGYV-----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
E GY+ G + + +G L T + N ++GSSR+F GF+T +
Sbjct: 241 EFGYLISKFGGKRKVDALTEK--YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNE 294
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GH
Sbjct: 295 VIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGH 348
Query: 458 EGLGLSLALGTAELVADMV 476
EG G+SLA T +++ +++
Sbjct: 349 EGDGISLAAVTGKVIEELL 367
>gi|42781921|ref|NP_979168.1| glycine oxidase [Bacillus cereus ATCC 10987]
gi|42737845|gb|AAS41776.1| glycine oxidase, putative [Bacillus cereus ATCC 10987]
Length = 375
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 170/376 (45%), Gaps = 52/376 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
DS ++ L + ++ F +K F H V + R + V+T+
Sbjct: 141 AT-----DSTVNPYLLAFALLAESKKFGTKA----FNHTEVKEMKRDIDGSFI--VETTN 189
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
T ++ K +V AAG W+ + L ++IP++PRKGH++V + ME
Sbjct: 190 GT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV-ME 241
Query: 344 AGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
GY+ ++ GQ +G L T + N ++GSSR F G +T +
Sbjct: 242 FGYL----ISKFGGQRKVDALTEKYGVALVFEPTESQ----NFLIGSSRXFVGXHTRINN 293
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A G
Sbjct: 294 EVIKCIANRAIRFYPKMVDMMVI------RSYAGLRPWTEDHLPIISRVEHIXNYFIAAG 347
Query: 457 HEGLGLSLALGTAELV 472
HEG G+SLA T +++
Sbjct: 348 HEGDGISLAAVTGKVM 363
>gi|206971865|ref|ZP_03232814.1| putative glycine oxidase [Bacillus cereus AH1134]
gi|365161219|ref|ZP_09357368.1| hypothetical protein HMPREF1014_02831 [Bacillus sp. 7_6_55CFAA_CT2]
gi|206733250|gb|EDZ50423.1| putative glycine oxidase [Bacillus cereus AH1134]
gi|363621446|gb|EHL72657.1| hypothetical protein HMPREF1014_02831 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 391
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 173/379 (45%), Gaps = 50/379 (13%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDS 223
++ GS+L+ + EE+ ++ V + EAGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTS 282
DS ++ L + + F +K F V + + ++ + VE +
Sbjct: 141 AT-----DSTVNPYLLAFSLLSEAQKFGAKA----FKQTEVKSMEIETDGSFVVE----T 187
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
N ++ + +V AAG W+ + L ++IP++PRKGH++V + M
Sbjct: 188 TNGTFTAQQVVNAAGVWAPKIGQML------NVNIPIEPRKGHIIVASRQQHVGCRKV-M 240
Query: 343 EAGYV-----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
E GY+ G + + +G L T + N ++GSSR+F GF+T +
Sbjct: 241 EFGYLISKFGGKRKVDALTEK--YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNE 294
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+I I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GH
Sbjct: 295 VIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGH 348
Query: 458 EGLGLSLALGTAELVADMV 476
EG G+SLA T +++ +++
Sbjct: 349 EGDGISLAAVTGKVIEELL 367
>gi|345008091|ref|YP_004810445.1| FAD dependent oxidoreductase [Streptomyces violaceusniger Tu 4113]
gi|344034440|gb|AEM80165.1| FAD dependent oxidoreductase [Streptomyces violaceusniger Tu 4113]
Length = 418
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 174/393 (44%), Gaps = 40/393 (10%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L V VVD+ G +GAG+G + + + PG E+ +LA S ++W + L G
Sbjct: 50 LRVVVVDRGAVAGGTSGAGEGNVLVSDKEPGPEL-ELAQYSRQVW---GEDLGAYG---- 101
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+ ++ G L++ TP L L+ ++ G+ +S ++L EP L E +
Sbjct: 102 GLWEFESKGGLVVAFTPTALGALQTLAERQRACGVDVREVSGAELPALEPRLTR-EAAGG 160
Query: 226 AFLPYDSQLDAMLAVAYIEKGNRHFA----SKGRYAEFYHDPVTCLLRSNSTGEVEAVQT 281
A P D+Q+ MLA A++ + R ++ F ++ V V+T
Sbjct: 161 ALYPQDAQVQPMLAAAHLLRLARRRGAVVRTRTEVVGFLRPGGGRPGGGHAGSPVTGVRT 220
Query: 282 SKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHAS 341
T+ S A++ AAG W+G++ +++PV PR+G +LV E + H
Sbjct: 221 PHGTV-SAPAVLNAAGTWAGAVAG------LAGVELPVLPRRGFVLVTEPLPPATVRHKV 273
Query: 342 MEAGYV---GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTI 398
A YV D L V G G +++GS+R+ GF+
Sbjct: 274 YSADYVDAVASSDAELQASPVVEGT-----------GGGTVLIGSTRERVGFDRRPSPAA 322
Query: 399 IDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHE 458
+ + + A +P L + +V G RPY PD PVIGP P ++ A GHE
Sbjct: 323 LRALARGAIGLFPVLAS------VRAMRVYAGFRPYCPDHLPVIGPDPRAPGLWHACGHE 376
Query: 459 GLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
G G+ LA GT +L+A + ++D PFA +
Sbjct: 377 GAGIGLAAGTGKLIAQALTGEATELDLTPFAPE 409
>gi|218892759|ref|YP_002441628.1| putative D-amino acid oxidase [Pseudomonas aeruginosa LESB58]
gi|218772987|emb|CAW28799.1| putative D-amino acid oxidase [Pseudomonas aeruginosa LESB58]
Length = 371
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 182/413 (44%), Gaps = 60/413 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGI+G A +L L V V+D GAT G G++ + P +L
Sbjct: 4 EVIVVGAGIVGSACAHEL-ARRGLDVLVLDSRR--GGATAVGMGHLVAMDDNPA----EL 56
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S + W+ A L + ++ G+L + EL + + + L G+
Sbjct: 57 ALSDYSIQAWRAWAADLPED-------CAYRNCGTLWLAADAAELAEAERKRQALLAVGV 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E L ++ L EP L G + A +P D L A A ++ G
Sbjct: 110 ACEMLDAARLRDLEPVLRPGL-AGALKVPGDGILYAPNAARWL------LERAGPRLRRL 162
Query: 261 HDPVTCLLRSNSTGEVEA--VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
H V+ EV+ ++ + S +A+V+A G +G E+ ++P
Sbjct: 163 HAEVS---------EVDGSRLRLADGRWLSAEALVLANGIHAG----------ELCAELP 203
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + L H +E GYV + S++ A G
Sbjct: 204 IRPKKGHLLITDRYPG-TLRHQLVELGYVS---------SAHASSGTSVAFNAQPRPTGQ 253
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+ LGSSRQF + +VE ++ R+ +RA + P L L + + G R PDG
Sbjct: 254 IFLGSSRQFDTLDPQVEGPVLARMLRRALNYLPGLAGL------NAIRAWTGFRAATPDG 307
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
P++G P ++LA GHEGLG++ A G+A L+A + +D P+ Q
Sbjct: 308 LPLLGEHPAQPGLWLAVGHEGLGVTTAPGSARLLAAQLFGETPPLDPTPYLPQ 360
>gi|378951637|ref|YP_005209125.1| fad dependent oxidoreductase [Pseudomonas fluorescens F113]
gi|359761651|gb|AEV63730.1| fad dependent oxidoreductase [Pseudomonas fluorescens F113]
Length = 371
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 165/376 (43%), Gaps = 57/376 (15%)
Query: 99 QLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKL--WKMLADS 156
Q L +++V V+D GAT AG G++ ++ P +LAL L W+ LA +
Sbjct: 23 QALARRNVNVLVLD--AGWHGATAAGMGHLLVLDDNPA----ELALSQYSLQRWRELAPA 76
Query: 157 LRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPE 216
L D W+ G+L + EE+ + + L G E + + L Q EPE
Sbjct: 77 LPDG-------CAWRNNGTLWLAANAEEMAVAHTKYLNLLAHGEACELIGHAALHQREPE 129
Query: 217 LMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
L G + + D L A A ++ + + +E +
Sbjct: 130 LRPGLEG-GLLIKGDGILYAPAAARWMLDAPNIRQQRAQVSEV---------------DG 173
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
V+ S +A+++A G ++ TE+ ++P+ P+KGHLL+ + + +
Sbjct: 174 HRVRLDDGRWLSAEAVILANG----------IQATELCPELPIVPKKGHLLITDRYPA-T 222
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
+ H +E GYV ++ S++ G L +G+SRQF + +VE
Sbjct: 223 VTHTLVELGYVT---------SAHNASGPSVACNIQPRPTGQLFIGASRQFGTLDPQVEG 273
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
++ ++ KRA E+ P L L + + G R PDG P++G P ++LA G
Sbjct: 274 WMLAKMLKRAVEYLPGLAHL------NGIRAWTGFRAASPDGLPLVGQHPQRKGLWLAVG 327
Query: 457 HEGLGLSLALGTAELV 472
HEGLG++ A TA+L+
Sbjct: 328 HEGLGVTTAPATADLL 343
>gi|357393549|ref|YP_004908390.1| putative oxidoreductase [Kitasatospora setae KM-6054]
gi|311900026|dbj|BAJ32434.1| putative oxidoreductase [Kitasatospora setae KM-6054]
Length = 388
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 183/390 (46%), Gaps = 49/390 (12%)
Query: 104 SDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLD 163
S L VAVVD+ G TGAG+G + + + PG E+ DLAL S LW+ LA +Q
Sbjct: 28 SGLKVAVVDRGPVAGGTTGAGEGNLLVSDKEPGPEL-DLALLSTGLWRDLAAEFGEQ--- 83
Query: 164 PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDS 223
+ ++ G L++ P L +L+ + G+ A +++ +L EP L ED
Sbjct: 84 ----VEYEPKGGLVVATKPAGLELLQGFAAKQRAVGVEAVPVAADELRALEPHLA--EDL 137
Query: 224 RAAFL-PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS 282
+L P D+Q+ LA A++ + + RY + VT LLR G V V T
Sbjct: 138 PGGYLYPQDAQVQPALAAAHLLR----ASGADRY---LGEAVTGLLRGPG-GAVTGVVTE 189
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
+ L + A+V AAG W G L + +PV PR+G +LV E + +
Sbjct: 190 RREL-AAPAVVNAAGTWGGELA------ALAGVRLPVLPRRGFVLVTEPLPRI-VRRKVY 241
Query: 343 EAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDR 401
A YV V G L S G +++G+SR+ GF+ + ++ R
Sbjct: 242 AADYVA---------DVASGSADLQSSAVVEGTPAGPVLIGASRERVGFDRTLNPEVLHR 292
Query: 402 IWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGP---VPGLSKVFLATGHE 458
+ +AA +P LRD+ + R R G RPY+PD P IG VPGL + A GHE
Sbjct: 293 LAAQAAALFPVLRDVLV-----QRSYR-GFRPYLPDHLPAIGQDARVPGL---YHACGHE 343
Query: 459 GLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G G+ LA T L++ + ++D APF
Sbjct: 344 GAGIGLAPATGLLISRQLTGERPELDLAPF 373
>gi|297190774|ref|ZP_06908172.1| oxidoreductase [Streptomyces pristinaespiralis ATCC 25486]
gi|297150615|gb|EFH30689.1| oxidoreductase [Streptomyces pristinaespiralis ATCC 25486]
Length = 403
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 181/388 (46%), Gaps = 39/388 (10%)
Query: 104 SDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLD 163
S LSV V+D+ G TGAG+G + + + PG E+ +LAL S +LW+ L+D L +
Sbjct: 28 SGLSVTVIDRGPVAGGTTGAGEGNLLVSDKEPGPEL-ELALLSRRLWRELSDLLPPR--- 83
Query: 164 PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDS 223
I ++ G L++ T L L + + EAG+ + L EP L D
Sbjct: 84 ----IEYEAKGGLVVASTGPSLAALGDFAARQQEAGVEVHEVMGDRLRDLEPHL--APDL 137
Query: 224 RAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS 282
F P D+Q+ LA A++ + S GR + VT +L+ + GEV V+T+
Sbjct: 138 AGGFHYPQDAQVQPALAAAHLLRAAGGQGS-GRTLLRLGEEVTGVLK-GANGEVRGVRTA 195
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
L++ +V AAG W G L +D+PV PR+G +LV E + +
Sbjct: 196 SGDLHAPY-VVNAAGTWGGRLA------GLAGVDLPVLPRRGFVLVTEPLPRV-VRRKVY 247
Query: 343 EAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRI 402
A Y+ D+ + L S G +++G+SR+ GF+ + + R+
Sbjct: 248 TADYI--TDVA------SGSAALQTSAVVEGTPAGPVLIGASRERVGFDRTLSVEAVRRL 299
Query: 403 WKRAAEFYPKLRDLCLADFISNRKVRI--GLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
+A +P L + R +R G RPY+PD P IGP P + + A GHEG
Sbjct: 300 ASQATRLFPVLAGV--------RAIRTYAGFRPYLPDHLPAIGPDPRVPGLLHACGHEGA 351
Query: 461 GLSLALGTAELVADMVLTNPLKVDSAPF 488
G+ LA T +VA ++ + L +D PF
Sbjct: 352 GIGLAPATGMIVARILAGDELPMDIQPF 379
>gi|289705405|ref|ZP_06501801.1| FAD dependent oxidoreductase [Micrococcus luteus SK58]
gi|289557920|gb|EFD51215.1| FAD dependent oxidoreductase [Micrococcus luteus SK58]
Length = 398
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 177/388 (45%), Gaps = 47/388 (12%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
++V V+D+ P +G + +G I + + G E+ +L+ S LW A L +
Sbjct: 31 MAVHVLDRGRPGAGTSSRCEGNILVSDKEHGPEL-ELSRYSLGLW---AGELGEHA---- 82
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
Q +++ G +++ L L+ + + G+R E + ++ L EP + + A
Sbjct: 83 QAWEFERKGGIIVASQESSLQSLRRALAVQHQHGIRVEEMDAAALRAIEPHV-TPDAVGA 141
Query: 226 AFLPYDSQLDAMLAVAYIEKGNR--HFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
AF P DSQ+ M+ V NR H A + VT +LR V V+TS+
Sbjct: 142 AFYPDDSQVMPMMVV------NRLLHLAREHGATVSADTEVTGMLRRGDA--VIGVRTSR 193
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
+Y+ A+V AAG W+G + H + +PV PR+G+++V +++H
Sbjct: 194 GDVYAD-AVVNAAGPWAGGVAH------LAGVHLPVVPRRGYVMVTA-VQPPRVHHKVYA 245
Query: 344 AGY---VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
A Y VG D +L S + G++++GSSR+ GF+ E+ +
Sbjct: 246 AEYIDDVGTSDASL-----------QTSPVVESTPAGSILIGSSRERVGFSDELNHEALR 294
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
+ A +P LRD+ + G RPY D P+IGP ++ ATGHEG
Sbjct: 295 GMAAGAVRLFPFLRDVPVLRHYH------GFRPYSLDHVPMIGPDSRAPGLWHATGHEGA 348
Query: 461 GLSLALGTAELVADMVLTNPLKVDSAPF 488
G+ ++GT +L+A + +D PF
Sbjct: 349 GIGCSVGTGKLLAQQLAGTEPDLDMTPF 376
>gi|228939953|ref|ZP_04102528.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228972848|ref|ZP_04133444.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228979430|ref|ZP_04139763.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis Bt407]
gi|384186898|ref|YP_005572794.1| sarcosine oxidase beta subunit [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410675204|ref|YP_006927575.1| D-amino acid dehydrogenase small subunit DadA [Bacillus
thuringiensis Bt407]
gi|452199258|ref|YP_007479339.1| D-amino-acid oxidase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|228780287|gb|EEM28521.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis Bt407]
gi|228786855|gb|EEM34838.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228819703|gb|EEM65753.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326940607|gb|AEA16503.1| sarcosine oxidase beta subunit [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409174333|gb|AFV18638.1| D-amino acid dehydrogenase small subunit DadA [Bacillus
thuringiensis Bt407]
gi|452104651|gb|AGG01591.1| D-amino-acid oxidase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 391
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 169/376 (44%), Gaps = 44/376 (11%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTNLSEELEHS------- 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ GS+L+ + EE+ ++ V + +AGL L D+ E +D
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKKAGLPFRMLDRQDI--REESTFFADDLLGGL 138
Query: 228 -LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTSKNT 285
DS ++ L + + F +K F V + + +N + VE + N
Sbjct: 139 ECATDSTVNPYLLAFSLLSEAQKFGAKA----FKQTEVKSMKIETNGSFVVE----TTNG 190
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
++ K +V AAG W+ + L ++IP++PRKGH++V + ME G
Sbjct: 191 TFTAKQVVNAAGVWAPKIGQML------NVNIPIEPRKGHIIVASRQQHVGCRKV-MEFG 243
Query: 346 YV-----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
Y+ G + + +G L T + N ++GSSR+F GF+T + +I
Sbjct: 244 YLISKFGGKRKVDALTEK--YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNEVIK 297
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I RA FYPK+ D+ + + GLRP+ D P+I V + F+A GHEG
Sbjct: 298 CIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGD 351
Query: 461 GLSLALGTAELVADMV 476
G+SLA T +++ +++
Sbjct: 352 GISLAAVTGKVIEELL 367
>gi|421782828|ref|ZP_16219282.1| FAD dependent oxidoreductase [Serratia plymuthica A30]
gi|407755237|gb|EKF65366.1| FAD dependent oxidoreductase [Serratia plymuthica A30]
Length = 373
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 186/417 (44%), Gaps = 60/417 (14%)
Query: 75 ASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRT 134
A RC + I++GAGIIG A +L V +VD P GAT AG G++ +
Sbjct: 2 AVGRC--AEAIVVGAGIIGAACAWRL-AQEGHQVLLVDNQRP--GATAAGMGHLVCMDDN 56
Query: 135 PGSEIWDLALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERV 192
P +LAL S +LW+ + + + + W+ G+L + E+ + + +
Sbjct: 57 PA----ELALSAYSLQLWRGVLERMPES-------CAWRGCGTLWLAEREGEMAIAELKQ 105
Query: 193 KQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS 252
+++ E G+ +E LS++ + + EP L G + +P D + A +++
Sbjct: 106 RRMAEYGVHSEALSAAQIARLEPMLRPGL-AGGLQVPGDGIVYAPNVARWLQ------VD 158
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312
G D V L E +AV + + A+V+A G + L+ L
Sbjct: 159 AGSAIRVIADEVVML-------EEQAVVLASGKRLTAPAVVLACGLQADRLLAQPL---- 207
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTA 371
+K +KGHL + + + ++ H +E GY G H S++
Sbjct: 208 ------LKAKKGHLAITDRYPQ-RVRHQLVELGY----------GASAHASGGTSVAFNV 250
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
G L++GSSRQF + +++ ++ + RA F P L L + + GL
Sbjct: 251 QARPTGQLLIGSSRQFDSPDADIDLPLLAAMLMRAEAFLPALAQLNII------RCWTGL 304
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
R DG P++GP P ++LA GHEGLG++ ALG+A L+A + + +D P+
Sbjct: 305 RAASADGLPLLGPHPQHRWLWLALGHEGLGVTTALGSAALIAAQIQHHRPAIDDTPY 361
>gi|398802719|ref|ZP_10561922.1| glycine/D-amino acid oxidase, deaminating [Polaromonas sp. CF318]
gi|398098957|gb|EJL89230.1| glycine/D-amino acid oxidase, deaminating [Polaromonas sp. CF318]
Length = 366
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 186/411 (45%), Gaps = 56/411 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGI+G A + L + LSV V+D + GAT AG G++ ++ P +E+ L
Sbjct: 4 DVIVIGAGIVGAACAHE-LARAGLSVLVLDAGL--GGATQAGMGHLVVMDDNP-AEL-TL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S KLW A + + G+L + E+ + + + + L G+
Sbjct: 59 SHESLKLWHDWAPRMNAD-------CAFAACGTLWLAANDAEMTVAENKRRCLQAHGVAC 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E L ++ L AEP L G + A + DS V Y R ++
Sbjct: 112 ELLGAAALAAAEPALRPGL-AGALKVSGDS-------VVYAPNAARWLLAQA-------- 155
Query: 263 PVTCLLRSNSTGEVEA--VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
P L +E V+ + + S A+++AAG +G L DL P++
Sbjct: 156 PRAITLEQAEVAAIEGSRVRLADGSWRSAGAVLLAAGIEAGRLCPDL----------PIR 205
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHL + + + ++H +E GY+ +H S++ G L+
Sbjct: 206 PKKGHLAITDRYPG-TVHHQLVELGYI---------SSAHHSDGASVAFNVQPRPTGQLL 255
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF + VE ++ R+ RA ++ P L L + + G R PDG P
Sbjct: 256 IGSSRQFDTTDPAVEAPMLARMLGRALDYLPALAGL------NTVRTWTGFRAATPDGLP 309
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
+IG P ++LA GHEGLG++ A TA L+A + ++AP+ +Q
Sbjct: 310 IIGRHPRQPGLWLAVGHEGLGVTTAPATARLLAAQLTGAAPPFEAAPYGMQ 360
>gi|292489058|ref|YP_003531945.1| FAD dependent oxidoreductase [Erwinia amylovora CFBP1430]
gi|428786017|ref|ZP_19003500.1| FAD dependent oxidoreductase [Erwinia amylovora ACW56400]
gi|291554492|emb|CBA22030.1| FAD dependent oxidoreductase [Erwinia amylovora CFBP1430]
gi|312173213|emb|CBX81468.1| FAD dependent oxidoreductase [Erwinia amylovora ATCC BAA-2158]
gi|426275412|gb|EKV53147.1| FAD dependent oxidoreductase [Erwinia amylovora ACW56400]
Length = 368
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 169/377 (44%), Gaps = 53/377 (14%)
Query: 101 LVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160
L + L V ++D +PC AT AG G++ ++ P L S K W+ ++ L D
Sbjct: 25 LATAGLEVTIIDAGLPC--ATSAGMGHLLILDDNPAE--CALTRYSLKRWQEISHLLPDA 80
Query: 161 GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVG 220
+++ G+L + + +E+ + +++ L + G L+ L QAEP + G
Sbjct: 81 A-------AYRRNGTLWMAASEQEMAVAEQKYHLLRQLGENCALLNGEQLTQAEPAVRQG 133
Query: 221 EDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQ 280
+ + D L A + ++ + R +GR + ++P L
Sbjct: 134 L-AGGLLVKDDGILYAPVVAQWMSQHPRINNIRGRVVDL-NEPYVVL------------- 178
Query: 281 TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHA 340
Y + IV+A G ++ TE+ ++P+ +KGHLL+ + + +
Sbjct: 179 -DDGRQYRARHIVLANG----------IQATELSPELPLVAKKGHLLITDRYPH-GITRT 226
Query: 341 SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
+E GYV V+H S + G L++G++RQF + VE ++
Sbjct: 227 LVELGYVT---------SVHHATGPSAACNIQPRPTGQLLVGATRQFDSVDPAVEPWMLS 277
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
++ +RA E+ P ++ + + + G R PDG P+IG PG ++LA GHEGL
Sbjct: 278 KMVRRACEYVPAVKKM------NAIRTWTGFRAASPDGLPLIGRYPGRCGLWLAVGHEGL 331
Query: 461 GLSLALGTAELVADMVL 477
G++ A TA+L+ +L
Sbjct: 332 GVTTATATADLIKADIL 348
>gi|398807603|ref|ZP_10566479.1| glycine/D-amino acid oxidase, deaminating [Variovorax sp. CF313]
gi|398089138|gb|EJL79666.1| glycine/D-amino acid oxidase, deaminating [Variovorax sp. CF313]
Length = 367
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 185/407 (45%), Gaps = 51/407 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGI+G A+ L V V+D + + G G +V +E+ +L
Sbjct: 4 DVIVIGAGIVGAACAQALAQAGR-RVLVLDAAIGGATGAGMGH---LVVMDDNAAEL-EL 58
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S W+ LA + D + G+L I EE+ + + ++L G+ +
Sbjct: 59 SRHSVAQWRELAPRMSDD-------CAYSACGTLWIAANDEEMAEAERKQQRLRAHGIGS 111
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
L + +L AEP L G S A +P D L A A ++ N H
Sbjct: 112 RLLDARELASAEPALRKGL-SGALEVPGDGILYAPNAARWLLTQNTE------SIRVEHA 164
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
V + G + S+ T +V+A G ++ T + ++P++P+
Sbjct: 165 KVEAI---EDDGTLRLADGSRRT---APQVVLANG----------IQATTLCPELPIRPK 208
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHLLV + + ++H +E GYV +H + S++ G L++G
Sbjct: 209 KGHLLVTDRYPG-TVHHQLVELGYVT---------SAHHSEGDSVAFNVQPRPTGQLLVG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + VE ++ R+ +R ++ P L +L + + G+R PDG P++
Sbjct: 259 SSRQFDTTDPAVEAPMLARMLQRTLDYLPGLANL------NAVRSWTGMRAASPDGLPLL 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
G P K++LA GHEGLG++ A G+A L+A ++ D+AP+A
Sbjct: 313 GKHPWREKLWLAVGHEGLGVTTAPGSAHLLAALMTGATPDFDAAPYA 359
>gi|159899019|ref|YP_001545266.1| FAD dependent oxidoreductase [Herpetosiphon aurantiacus DSM 785]
gi|159892058|gb|ABX05138.1| FAD dependent oxidoreductase [Herpetosiphon aurantiacus DSM 785]
Length = 370
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 181/393 (46%), Gaps = 58/393 (14%)
Query: 101 LVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160
L + V ++++ SGAT AG G+I V G L L +LW+ L
Sbjct: 20 LTQAGWQVTLIERDCLGSGATAAGMGHI--VVMDEGEAQLKLTLFGQQLWQALT------ 71
Query: 161 GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL--- 217
D Q + G+L + EE ++ E+ + + E L ++ L EP L
Sbjct: 72 -ADHPQPHEYHACGTLWVATDTEEWDLVAEKAAVYQQYQIACEILDAAALYAHEPALREG 130
Query: 218 MVGEDSRAAFLPYDSQLDAMLAVAYI-EKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
+VG +P DS + + Y+ ++ +H A T + +T +
Sbjct: 131 LVG----GLLVPNDSVVYPPKSAVYLWQQAEKHGA-------------TLVYGEVTTIQT 173
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
VQ + S AIVVA G R +++ ++P++ ++G L++ E + +L
Sbjct: 174 NYVQLNDGRQLSADAIVVANG----------QRCIDLLPELPIRAKRGQLVITERYPAL- 222
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
+ H +E Y+ + + G ++ ++ + G L++GSSRQF + +++Q
Sbjct: 223 IKHQLVELSYIKN-------AHASSGDSVAFNLQPRPN--GQLLIGSSRQFDRTDRQIDQ 273
Query: 397 TIIDRIWKRAAEFYPKLRDL-CLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
++ ++ ++A ++ P L D+ CL + G+R PDG P+IG P + ++L
Sbjct: 274 LLLSQMLRKAIDYVPALADVRCL-------RTWTGVRAASPDGLPLIGQHPERAGLWLNV 326
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
GHEGLG++ AL +A L+AD +L +++ P+
Sbjct: 327 GHEGLGITTALSSARLLADQMLQRQSQLEIQPY 359
>gi|319796571|ref|YP_004158211.1| fad dependent oxidoreductase [Variovorax paradoxus EPS]
gi|315599034|gb|ADU40100.1| FAD dependent oxidoreductase [Variovorax paradoxus EPS]
Length = 367
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 194/412 (47%), Gaps = 55/412 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGI+G A L +V V+D + GATGAG G++ ++ P +L
Sbjct: 4 DVIVIGAGIVGAACAHALAQAGR-NVLVLDARI--GGATGAGMGHLLVMDDNPA----EL 56
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S W+ LA + + + G+L I EE+ + + ++L G+
Sbjct: 57 ALSRDSTARWRALAPRMPED-------CAYSACGTLWIAANAEEMAEAERKQQRLRADGI 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
+ L ++ L +AEP L G + A +P D L A A ++ A G
Sbjct: 110 DSRLLDAAALARAEPALRKGL-AGALEVPGDGILYAPNAARWL------LAQGGDAIRIE 162
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H V + + ++ + T + IV+A G + T + ++P++
Sbjct: 163 HAKVDAIEDDGT------LRLADGTRRTAPQIVLANG----------IEATTLCPELPIR 206
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + ++H +E GYV +H S++ G L+
Sbjct: 207 PKKGHLLITDRYPG-TVHHQLVELGYVT---------SAHHSDGDSVAFNVQPRPTGQLL 256
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF + VE ++ R+ +R ++ P L +L + + G+R PDG P
Sbjct: 257 VGSSRQFDTTDPAVEAPMLARMLQRTLDYLPGLANL------NAVRSWTGMRAASPDGLP 310
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQG 492
++G P K++LA GHEGLG++ A G+A L+A ++ + D+AP+A +G
Sbjct: 311 LLGKHPWREKLWLAVGHEGLGVTTAPGSAHLLAALMTGAAPEFDAAPYAPRG 362
>gi|423447376|ref|ZP_17424255.1| hypothetical protein IEC_01984 [Bacillus cereus BAG5O-1]
gi|401131372|gb|EJQ39026.1| hypothetical protein IEC_01984 [Bacillus cereus BAG5O-1]
Length = 391
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 176/382 (46%), Gaps = 56/382 (14%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 29 VTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTNLSEELE-------HS 80
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGED- 222
++ GS+L+ + EE+ ++ V + +AGL L D+ + P +L+ G +
Sbjct: 81 FEYRAPGSILVCESDEEMEAAQQWVNRQKDAGLPFRMLDRQDIREESPFFADDLLGGLEC 140
Query: 223 -SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT 281
+ + PY +LA + + + + A + E ++ + G V+T
Sbjct: 141 ATDSTVNPY------LLAFSLLAESKKMGAKAINHTEVKE------MKRDIDGSF-IVET 187
Query: 282 SKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHAS 341
+ T ++ K IV AAG W+ + L ++IP++PRKGH++V +
Sbjct: 188 TNGT-FTAKQIVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV- 239
Query: 342 MEAGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEV 394
ME GY+ ++ G+ +G L T + N ++GSSR+F GF+T +
Sbjct: 240 MEFGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRI 291
Query: 395 EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLA 454
+I I RA FYPK+ D+ + + GLRP+ D P+I V + ++A
Sbjct: 292 NNEVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVDHIPNYYIA 345
Query: 455 TGHEGLGLSLALGTAELVADMV 476
GHEG G+SLA T +++ +++
Sbjct: 346 AGHEGDGISLAAVTGKVIEELL 367
>gi|333926647|ref|YP_004500226.1| FAD dependent oxidoreductase [Serratia sp. AS12]
gi|333931600|ref|YP_004505178.1| FAD dependent oxidoreductase [Serratia plymuthica AS9]
gi|386328470|ref|YP_006024640.1| FAD dependent oxidoreductase [Serratia sp. AS13]
gi|333473207|gb|AEF44917.1| FAD dependent oxidoreductase [Serratia plymuthica AS9]
gi|333490707|gb|AEF49869.1| FAD dependent oxidoreductase [Serratia sp. AS12]
gi|333960803|gb|AEG27576.1| FAD dependent oxidoreductase [Serratia sp. AS13]
Length = 374
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 183/409 (44%), Gaps = 58/409 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+ I++GAGIIG A +L V +VD P GAT AG G++ + P +L
Sbjct: 8 EAIVVGAGIIGAACAWRL-AQEGHQVLLVDNQRP--GATAAGMGHLVCMDDNPA----EL 60
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S +LW+ + + + + W+ G+L + +E+ + + +++++ E G+
Sbjct: 61 ALSAYSLQLWRGVLERMPES-------CAWRGCGTLWLAEREDEMAIAERKLRRMAEYGV 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
+E L ++ + + EP L G + +P D + A +++ G
Sbjct: 114 LSETLIAAQIARLEPMLRPGL-AGGLQVPGDGIVYAPNVARWLQ------VDAGPTIRVI 166
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
D V L E +AV + + +V+A G + L+ L +K
Sbjct: 167 VDEVVML-------EEQAVVLASGKRLTASVVVLACGLQADRLLAQPL----------LK 209
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGNL 379
+KGHL + + + ++ H +E GY G H S++ G L
Sbjct: 210 AKKGHLAITDRYPQ-RVRHQLVELGY----------GASAHASDGTSVAFNVQARPTGQL 258
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++GSSRQF + +++ ++ + RA F P L L + + GLR DG
Sbjct: 259 LIGSSRQFDSPDADIDLPLLAAMLMRAEAFLPALSQLNII------RCWTGLRAASADGL 312
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++GP P ++LA GHEGLG++ ALG+A L+A + + +D P+
Sbjct: 313 PLLGPHPQHRWLWLALGHEGLGVTTALGSAALIAAQIQNHRPAIDDTPY 361
>gi|424906710|ref|ZP_18330205.1| oxidoreductase, FAD-binding family protein [Burkholderia
thailandensis MSMB43]
gi|390927716|gb|EIP85123.1| oxidoreductase, FAD-binding family protein [Burkholderia
thailandensis MSMB43]
Length = 377
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 180/409 (44%), Gaps = 59/409 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAGI+G A + L V VVD GATGAG G++ + +L
Sbjct: 7 DVIVIGAGIVGAACAHEF-AQRGLRVVVVDD--GSGGATGAGMGHLVAMD----DNAAEL 59
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S LW L D++ + ++ G+L + E+ + + + L E G+
Sbjct: 60 ALTHYSIGLWGALRDAMPEG-------CAYRNCGTLWLAADAHEMDLARAKQAALAERGV 112
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
+ + L EP M+ D A +P D L A +A ++
Sbjct: 113 AGALIDRAALAALEP--MLRADLGGALKIPGDGILYAPVAARWL---------------L 155
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
P L R+ + AV + L S + A ++ + + +V +P+
Sbjct: 156 ERLPGVALRRARAV----AVDGASVALESGGVLRADA-----VVVANGVAARALVPGLPL 206
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+P+KGHLL+ + + + +++H +E GY + S++ G L
Sbjct: 207 RPKKGHLLITDRYPA-RVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQL 256
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++GSSRQF + VE ++ R+ +RA + P L L + + G R PDG
Sbjct: 257 LIGSSRQFDTEDPRVEAPVLARMLRRALGYLPALAGL------NGIRAWTGFRAASPDGL 310
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++G P ++LA GHEGLG++ A G+A ++A ++ +D+ P+
Sbjct: 311 PLLGEHPSRRGLWLAVGHEGLGVTTAPGSARVLAALMFGERAAIDAGPY 359
>gi|229116345|ref|ZP_04245735.1| Sarcosine oxidase, beta subunit [Bacillus cereus Rock1-3]
gi|423379360|ref|ZP_17356644.1| hypothetical protein IC9_02713 [Bacillus cereus BAG1O-2]
gi|423465475|ref|ZP_17442243.1| hypothetical protein IEK_02662 [Bacillus cereus BAG6O-1]
gi|423539913|ref|ZP_17516304.1| hypothetical protein IGK_02005 [Bacillus cereus HuB4-10]
gi|423546138|ref|ZP_17522496.1| hypothetical protein IGO_02573 [Bacillus cereus HuB5-5]
gi|423624060|ref|ZP_17599838.1| hypothetical protein IK3_02658 [Bacillus cereus VD148]
gi|228667177|gb|EEL22629.1| Sarcosine oxidase, beta subunit [Bacillus cereus Rock1-3]
gi|401173448|gb|EJQ80660.1| hypothetical protein IGK_02005 [Bacillus cereus HuB4-10]
gi|401181951|gb|EJQ89098.1| hypothetical protein IGO_02573 [Bacillus cereus HuB5-5]
gi|401257372|gb|EJR63571.1| hypothetical protein IK3_02658 [Bacillus cereus VD148]
gi|401633008|gb|EJS50790.1| hypothetical protein IC9_02713 [Bacillus cereus BAG1O-2]
gi|402417290|gb|EJV49592.1| hypothetical protein IEK_02662 [Bacillus cereus BAG6O-1]
Length = 391
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 176/383 (45%), Gaps = 56/383 (14%)
Query: 107 SVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQ 166
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 28 DVTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------H 79
Query: 167 VIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGED 222
++ GS+L+ + EE+ ++ V + +AGL L D+ + P +L+ G +
Sbjct: 80 SFEYRAPGSILVCESDEEMEAAQQWVNRQKDAGLPFRMLDRQDIREESPFFADDLLGGLE 139
Query: 223 --SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQ 280
+ + PY +LA + + + + A + E ++ + G V+
Sbjct: 140 CATDSTVNPY------LLAFSLLAESKKMGAKAINHTEVKE------MKRDIDGSF-IVE 186
Query: 281 TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHA 340
T+ T ++ K IV AAG W+ + L ++IP++PRKGH++V +
Sbjct: 187 TTNGT-FTAKQIVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV 239
Query: 341 SMEAGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
ME GY+ ++ G+ +G L T + N ++GSSR+F GF+T
Sbjct: 240 -MEFGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTR 290
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ +I I RA FYPK+ D+ + + GLRP+ D P+I V + ++
Sbjct: 291 INNEVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVDHIPNYYI 344
Query: 454 ATGHEGLGLSLALGTAELVADMV 476
A GHEG G+SLA T +++ +++
Sbjct: 345 AAGHEGDGISLAAVTGKVIEELL 367
>gi|408682858|ref|YP_006882685.1| D-amino-acid oxidase [Streptomyces venezuelae ATCC 10712]
gi|328887187|emb|CCA60426.1| D-amino-acid oxidase [Streptomyces venezuelae ATCC 10712]
Length = 385
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 187/413 (45%), Gaps = 48/413 (11%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T DVI+IGAG++G A + + LSV VVD+ G TGAG+G + + + PG E+
Sbjct: 6 TSDVIVIGAGVVGAACAHYAAL-AGLSVTVVDRGSVAGGTTGAGEGNLLVSDKEPGPEL- 63
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
+LAL S LW LA+ L + ++ G L++ L L+E + +AG+
Sbjct: 64 ELALLSTALWSELAERLP-------PAVEYEAKGGLVVASGETGLHALREFAGRQEKAGV 116
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQL--DAMLAVAYIEKGNRHFASKGRYAE 258
A + + L EP L G + P D+Q+ A G+R + G
Sbjct: 117 IAHEVPADRLHDLEPHLAPGLTGGFHY-PQDAQVMPAHAAARLLHAAGDRVRLALG---- 171
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
+ VT LL + + G V V+T+ +++ +V AAG W G++ + +P
Sbjct: 172 ---EEVTALL-TGADGAVRGVRTTTRDIHAPY-VVNAAGTWGGAVA------GLAGVHLP 220
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIG 377
V PR+G +LV E + + H A YV V G L S G
Sbjct: 221 VLPRRGFVLVTEPLPRV-VRHKVYAADYVA---------DVASGSAALQTSAVVEGTPAG 270
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR--IGLRPYM 435
+++G+SR+ GF+ + ++ R+ A +P L + R +R +G RPY+
Sbjct: 271 PVLIGASRERVGFDRTLSTEVLRRLATGATTLFPVLGTV--------RAIRTYLGFRPYL 322
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PD P +GP P + + A GHEG G+ LA T +V V +D PF
Sbjct: 323 PDHLPAVGPDPRVPGLLHACGHEGAGIGLAPVTGRIVTACVTGTEPPLDLHPF 375
>gi|399005643|ref|ZP_10708217.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM17]
gi|398125553|gb|EJM15024.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM17]
Length = 377
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 177/407 (43%), Gaps = 55/407 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IG GI+G A ++ L V V+D GATGAG G+ +V L
Sbjct: 8 DVLVIGGGIVGAACAHEM-ARRGLRVRVLDNA--SGGATGAGMGH--LVAMDDNRAELAL 62
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S LW L L ++ G+L + E+ + + + L + G+
Sbjct: 63 SHYSIGLWNQLRAQLP-------ATCAYRNCGTLWLAADAAEMDLARAKQINLAQHGVAG 115
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E L S+ L EP L G A +P D L +A + ++
Sbjct: 116 ELLDSATLAALEPLLRKGLGG-ALKIPGDGIL---------------YAPATAHWLLHNT 159
Query: 263 P-VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
P ++C + S V+ + + +V+A G + +L+ +L P++P
Sbjct: 160 PGISCERATVSAIADHRVELDDGRVLRAEYVVLANGLAAKNLLPEL----------PLRP 209
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVL 381
+KGHLL+ + + +++H +E GY ++G S++ G L++
Sbjct: 210 KKGHLLITDRYPR-QVSHQLVELGYAAS-------AHASNGT--SVAFNVQPRPTGQLLI 259
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
GSSRQF + +E ++ + +RA + P L L + + G R PDG P+
Sbjct: 260 GSSRQFDSLDPAIEPEVLTPMLQRAVAYLPGLAQL------NGIRAWTGFRAATPDGLPI 313
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+G P + ++LA GHEGLG++ A G+ L+ ++L +D+ +
Sbjct: 314 LGQHPRHTGLWLAVGHEGLGVTTAPGSGRLLTQLLLGERPDIDAQAY 360
>gi|292900186|ref|YP_003539555.1| FAD-dependent oxidoreductase [Erwinia amylovora ATCC 49946]
gi|291200034|emb|CBJ47159.1| putative FAD-dependent oxidoreductase [Erwinia amylovora ATCC
49946]
Length = 368
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 169/377 (44%), Gaps = 53/377 (14%)
Query: 101 LVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160
L + L V ++D +PC AT AG G++ ++ P L S K W+ ++ L D
Sbjct: 25 LATAGLEVTIIDAGLPC--ATSAGMGHLLILDDNPAE--CALTRYSLKRWQEISHLLPDA 80
Query: 161 GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVG 220
+++ G+L + + +E+ + +++ L + G L+ L QA+P + G
Sbjct: 81 A-------AYRRNGTLWMAASEQEMAVAEQKYHLLRQLGENCALLNGEQLTQADPAVRQG 133
Query: 221 EDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQ 280
+ + D L A + ++ + R +GR + ++P L
Sbjct: 134 L-AGGLLVKDDGILYAPVVAQWMSQHPRINNIRGRVVDL-NEPYVVL------------- 178
Query: 281 TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHA 340
Y + IV+A G ++ TE+ ++P+ +KGHLL+ + + +
Sbjct: 179 -DDGRQYRARHIVLANG----------IQATELSPELPLVAKKGHLLITDRYPH-GITRT 226
Query: 341 SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
+E GYV V+H S + G L++G++RQF + VE ++
Sbjct: 227 LVELGYVT---------SVHHATGPSAACNIQPRPTGQLLVGATRQFDSVDPAVEPWMLS 277
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
++ +RA E+ P ++ + + + G R PDG P+IG PG ++LA GHEGL
Sbjct: 278 KMVRRACEYVPAVKKM------NAIRTWTGFRAASPDGLPLIGRYPGRCGLWLAVGHEGL 331
Query: 461 GLSLALGTAELVADMVL 477
G++ A TA+L+ +L
Sbjct: 332 GVTTATATADLIKADIL 348
>gi|259907708|ref|YP_002648064.1| oxidoreductase [Erwinia pyrifoliae Ep1/96]
gi|387870479|ref|YP_005801849.1| FAD dependent oxidoreductase [Erwinia pyrifoliae DSM 12163]
gi|224963330|emb|CAX54815.1| Putative oxidoreductase [Erwinia pyrifoliae Ep1/96]
gi|283477562|emb|CAY73478.1| FAD dependent oxidoreductase [Erwinia pyrifoliae DSM 12163]
Length = 368
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 171/388 (44%), Gaps = 53/388 (13%)
Query: 101 LVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160
L + L V V+D +P AT AG G++ ++ DL S K WK ++ +L +
Sbjct: 25 LANAGLKVIVIDAGLP--NATSAGMGHLLILDDNSAER--DLTRYSLKRWKEISHALPEA 80
Query: 161 GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVG 220
+++ G+L + EE+ + +E+ L + G + L + + QAEP + G
Sbjct: 81 A-------AYRRNGTLWMAANEEEMAVAEEKYHLLRQLGEECDLLKAEQVTQAEPAIRHG 133
Query: 221 EDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQ 280
+ D L A + ++ + GR + ++P L
Sbjct: 134 LKG-GLLVKDDGILYAPVVAQWMSDHPQIKKVHGRVVDI-NEPYVVL------------- 178
Query: 281 TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHA 340
Y IV+A G ++ +E++ ++P+ P+KGHLL+ + + +
Sbjct: 179 -DDGRQYRAGHIVLANG----------IQASELLAELPLVPKKGHLLITDRYPH-GITRT 226
Query: 341 SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
+E GYV + +H S + G L++GS+RQF + VE ++
Sbjct: 227 LVELGYVT---------RAHHATGSSAACNIQPRPTGQLLVGSTRQFDSVDPAVEPWMLS 277
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
++ +RA E+ P L+++ + + G R PDG P+IG P ++LA GHEGL
Sbjct: 278 KMVRRACEYVPALKEM------NAIRTWTGFRAASPDGLPLIGRHPVRCGLWLAVGHEGL 331
Query: 461 GLSLALGTAELVADMVLTNPLKVDSAPF 488
G++ A TA+L+ + ++D+ +
Sbjct: 332 GVTTATATADLIKAAIFQQHHQLDAGAY 359
>gi|425898017|ref|ZP_18874608.1| FAD dependent oxidoreductase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397891207|gb|EJL07685.1| FAD dependent oxidoreductase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 377
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 177/407 (43%), Gaps = 55/407 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IG GI+G A ++ L V V+D GATGAG G+ +V L
Sbjct: 8 DVLVIGGGIVGAACAHEM-ARRGLRVRVLDNA--SGGATGAGMGH--LVAMDDNRAELAL 62
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S LW L L ++ G+L + E+ + + + L + G+
Sbjct: 63 SHYSIGLWNQLRAQLP-------ATCAYRNCGTLWLAADAAEMDLARAKQINLAQHGVAG 115
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E L S+ L EP L G A +P D L +A + ++
Sbjct: 116 ELLDSATLAALEPLLRKGLGG-ALKIPGDGIL---------------YAPATAHWLLHNT 159
Query: 263 P-VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
P ++C + S V+ + + +V+A G + +L+ +L P++P
Sbjct: 160 PGISCERATVSAIADHRVELDDGRVLRAEYVVLANGLAAQNLLPEL----------PLRP 209
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVL 381
+KGHLL+ + + +++H +E GY ++G S++ G L++
Sbjct: 210 KKGHLLITDRYPR-QVSHQLVELGYAAS-------AHASNGT--SVAFNVQPRPTGQLLI 259
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV 441
GSSRQF + +E ++ + +RA + P L L + + G R PDG P+
Sbjct: 260 GSSRQFDSLDPAIEPEVLTPMLQRAVAYLPGLAQL------NGIRAWTGFRAATPDGLPI 313
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+G P + ++LA GHEGLG++ A G+ L+ ++L +D+ +
Sbjct: 314 LGQHPRHTGLWLAVGHEGLGVTTAPGSGRLLTQLLLGERPDIDAQAY 360
>gi|300785133|ref|YP_003765424.1| FAD-dependent oxidoreductase [Amycolatopsis mediterranei U32]
gi|384148416|ref|YP_005531232.1| FAD-dependent oxidoreductase [Amycolatopsis mediterranei S699]
gi|399537016|ref|YP_006549678.1| FAD-dependent oxidoreductase [Amycolatopsis mediterranei S699]
gi|299794647|gb|ADJ45022.1| FAD-dependent oxidoreductase [Amycolatopsis mediterranei U32]
gi|340526570|gb|AEK41775.1| FAD-dependent oxidoreductase [Amycolatopsis mediterranei S699]
gi|398317786|gb|AFO76733.1| FAD-dependent oxidoreductase [Amycolatopsis mediterranei S699]
Length = 388
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 180/404 (44%), Gaps = 53/404 (13%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLA 143
V++IGAGIIG AR+L V + V V+D+ P G T G+G + + + PG+E+ LA
Sbjct: 6 VVVIGAGIIGAACARELAV-AGFDVLVLDRGRPAGGTTSHGEGNLLVSDKGPGAEL-ALA 63
Query: 144 LRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAE 203
S +LW L L + + G +++ T L + +AG+R E
Sbjct: 64 QLSARLWPRLVAELAEDDPRAAAATEFDPKGGIVVATTEAGAAALLAFAEAQSQAGVRTE 123
Query: 204 YLSSSDLLQAEPELMVGEDSRAAFLPYDSQLD-AMLAVAYIEKGNRHFASKGRYAEFYHD 262
L ++D+ AEP L E + A P D+Q+ A A+A + RH A
Sbjct: 124 RLDAADVAAAEPALTR-EVTAAVRYPEDAQVQPAGAALALLGSALRHGA----------- 171
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYS---------KKAIVVAAGCWSGSLMHDLLRETEI 313
R + EV +T + + +V AAG WSG + +
Sbjct: 172 ------RLRTEAEVTGARTRDHRITGVHVAGEVVDADVVVNAAGPWSGPV------SARL 219
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQ-ILSISMTAT 372
I V+PR+G +LV + + H +A YVG V G L S
Sbjct: 220 GAPIAVRPRRGEVLVTTPMPGV-VRHKVYDADYVG---------AVGTGSGDLQTSAVVE 269
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
+ G +++GSSR+ GF+ + ++ I +A +P L D + + G R
Sbjct: 270 STWGGTVLIGSSRRRVGFDDTIRPDVLSAIAAKAVRLFPALADAAVM------RAYGGFR 323
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
PY+ D PV+G P L ++ ATGHEG G+ L+ GTA L+ +++
Sbjct: 324 PYVDDHLPVLGEDPRLGNLWHATGHEGAGIGLSAGTARLLRELL 367
>gi|270261284|ref|ZP_06189557.1| FAD dependent oxidoreductase [Serratia odorifera 4Rx13]
gi|270044768|gb|EFA17859.1| FAD dependent oxidoreductase [Serratia odorifera 4Rx13]
Length = 373
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 185/417 (44%), Gaps = 60/417 (14%)
Query: 75 ASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRT 134
A RC + I++GAGIIG A +L V +VD P GAT AG G++ +
Sbjct: 2 AVGRC--AEAIVVGAGIIGAACAWRL-AQEGHQVLLVDNQRP--GATAAGMGHLVCMDDN 56
Query: 135 PGSEIWDLALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERV 192
P +LAL S +LW+ + + + + W+ G+L + +E+ + + +
Sbjct: 57 PA----ELALSAYSLQLWRGVLERMPES-------CAWRGCGTLWLAEREDEMAIAELKQ 105
Query: 193 KQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS 252
+++ E G+ E LS++ + + EP L G + +P D + A +++
Sbjct: 106 RRMAEYGVLGETLSAAQIARLEPMLRPGL-AGGLQVPGDGIVYAPNVARWLQ------VD 158
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312
G D V L E +AV + + +V+A G + L+ L
Sbjct: 159 AGSAIRVIADEVVML-------EEQAVVLASGKRLTAPVVVLACGLQADRLLAQPL---- 207
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTA 371
+K +KGHL + + + ++ H +E GY G H S++
Sbjct: 208 ------LKAKKGHLAITDRYPQ-RVRHQLVELGY----------GASAHASGGTSVAFNV 250
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
G L++GSSRQF + +++ ++ + RA F P L L + + GL
Sbjct: 251 QARPTGQLLIGSSRQFDSPDADIDLPLLAAMLMRAEAFLPALAQLNII------RCWTGL 304
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
R DG P++GP P ++LA GHEGLG++ A+G+A L+A + + +D P+
Sbjct: 305 RAASADGLPLLGPHPQHRWLWLALGHEGLGVTTAIGSAALIAAQIQHHRPAIDDTPY 361
>gi|423616857|ref|ZP_17592691.1| hypothetical protein IIO_02183 [Bacillus cereus VD115]
gi|401256881|gb|EJR63086.1| hypothetical protein IIO_02183 [Bacillus cereus VD115]
Length = 391
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 176/383 (45%), Gaps = 56/383 (14%)
Query: 107 SVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQ 166
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 28 DVTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------H 79
Query: 167 VIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGED 222
++ GS+L+ + EE+ ++ V + +AGL L D+ + P +L+ G +
Sbjct: 80 SFEYRAPGSILVCESDEEMEAAQQWVNRQKDAGLPFRMLDRQDIREESPFFADDLLGGLE 139
Query: 223 --SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQ 280
+ + PY +LA + + + + A + E ++ + G V+
Sbjct: 140 CATDSTVNPY------LLAFSLLAESKKMGAKAINHTEVKE------MKRDIDGSF-IVE 186
Query: 281 TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHA 340
T+ T ++ K +V AAG W+ + L ++IP++PRKGH++V +
Sbjct: 187 TTNGT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV 239
Query: 341 SMEAGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
ME GY+ ++ G+ +G L T + N ++GSSR+F GF+T
Sbjct: 240 -MEFGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFHTR 290
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ +I I RA FYPK+ D+ + + GLRP+ D P+I V + ++
Sbjct: 291 INNEVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVDHIPNYYI 344
Query: 454 ATGHEGLGLSLALGTAELVADMV 476
A GHEG G+SLA T +++ +++
Sbjct: 345 AAGHEGDGISLAAVTGKVIEELL 367
>gi|167616959|ref|ZP_02385590.1| oxidoreductase, FAD-binding family protein [Burkholderia
thailandensis Bt4]
Length = 377
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 181/408 (44%), Gaps = 55/408 (13%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
DV++IGAGI+G A + L V VVD GAT AG G+ +V +
Sbjct: 6 IDVVVIGAGIVGAACAHEF-AQRGLRVTVVDD--GRGGATAAGMGH--LVAMDDNAAELA 60
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
L S LW+ L D++ + ++ G+L + E+ + + + L E G+
Sbjct: 61 LTHYSIGLWRALRDAMPEG-------CAYRNCGTLWLAADAHEMDLARAKQAALAEHGVA 113
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E + + L EP M+ D A + D L A +A ++ +
Sbjct: 114 GELIDRAALAALEP--MLRADLGGALKVSGDGILYAPVAAHWL---------------LH 156
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
P L R+ + A+ ++ L + + A ++ + + E+V ++P++
Sbjct: 157 RLPGVALRRAKAV----AIDGARVALENGDVLRADA-----VVVANGVAARELVPELPLR 207
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + + +++H +E GY + S++ G L+
Sbjct: 208 PKKGHLLITDRYPA-QVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLL 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF + VE ++ R+ +RA + P L + + + G R PDG P
Sbjct: 258 IGSSRQFDTEDPRVEAPVLARMLRRALGYLPALAGM------NGIRAWTGFRAASPDGLP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
++G P ++LA GHEGLG++ A G A ++A ++ +D+ P+
Sbjct: 312 LLGEHPSRRGLWLAVGHEGLGVTTAPGGARVLAALMFGERAAIDAGPY 359
>gi|167578865|ref|ZP_02371739.1| oxidoreductase, FAD-binding family protein [Burkholderia
thailandensis TXDOH]
Length = 377
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 181/408 (44%), Gaps = 55/408 (13%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
DV++IGAGI+G A + L V VVD GAT AG G+ +V +
Sbjct: 6 IDVVVIGAGIVGAACAHEF-AQRGLRVTVVDD--GRGGATAAGMGH--LVAMDDNAAELA 60
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
L S LW+ L D++ + ++ G+L + E+ + + + L E G+
Sbjct: 61 LTHYSIGLWRALRDAMPEG-------CAYRNCGTLWLAADAHEMDLARAKQAALAEHGVA 113
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E + + L EP M+ D A + D L A +A ++ +
Sbjct: 114 GELIDRAALAALEP--MLRADLGGALKVSGDGILYAPVAAHWL---------------LH 156
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
P L R+ + A+ ++ L + + A ++ + + E+V ++P++
Sbjct: 157 RLPGVALRRAKAV----AIDGARVALENGDVLRADA-----VVVANGVAARELVPELPLR 207
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + + +++H +E GY + S++ G L+
Sbjct: 208 PKKGHLLITDRYPA-QVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLL 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF + VE ++ R+ +RA + P L + + + G R PDG P
Sbjct: 258 IGSSRQFDTEDPRVEAPVLARMLRRALGYLPALAGM------NGIRAWTGFRAASPDGLP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
++G P ++LA GHEGLG++ A G A ++A ++ +D+ P+
Sbjct: 312 LLGEHPSRRGLWLAVGHEGLGVTTAPGGARVLAALMFGERAAIDAGPY 359
>gi|381211290|ref|ZP_09918361.1| sarcosine oxidase subunit beta [Lentibacillus sp. Grbi]
gi|381211372|ref|ZP_09918443.1| sarcosine oxidase subunit beta [Lentibacillus sp. Grbi]
Length = 363
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 183/400 (45%), Gaps = 68/400 (17%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
++DVI+IG+G++G +IA L + +DK P SG +G+ Q ++W+ ++TP W
Sbjct: 4 SYDVIVIGSGVVGSSIAYHLSESKSKEILTIDKDFPLSGTSGSTQAWVWVHNKTPA---W 60
Query: 141 --DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA 198
+L + S +L+ L + D + +K+TG + + + ++ E
Sbjct: 61 YGELNMYSAELYPFLERKIGD--------VEYKRTGGIAPFFSESDRENALRLAEKQAEV 112
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYA 257
G++ E LS ++L+ EP L + A + D ++ L Y+ A++ A
Sbjct: 113 GIKVEVLSRDEVLEKEPALS-HNIAGATYSNIDGNVNPFRLIELYVR------AARKNGA 165
Query: 258 EF-YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
EF +++ V + + N +V T+++ Y +V+A G WS S M LL +D
Sbjct: 166 EFSFYNQVIDISKENGMFKV----TTQDGEYFSNQLVLAGGPWSKS-MGKLLG-----VD 215
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
+P+K +G ++V E + L L H +G Q ++G++L
Sbjct: 216 VPIKQVRGQIIVTEPLSPL-LTHT------IGGMR------QADNGEVL----------- 251
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
+G S++ G++ II + A +F P L + S G+R
Sbjct: 252 ----VGYSKEEVGYDRRSTLDIIQDTARMAIDFVPALEKANVVRCFS------GIRVMPE 301
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGT--AELVAD 474
DG P++G +PG+ ++A H G+ LS +GT EL+ D
Sbjct: 302 DGFPILGEIPGIENGYIAAMHSGITLSPLVGTLMTELLVD 341
>gi|417552095|ref|ZP_12203165.1| FAD dependent oxidoreductase domain protein [Acinetobacter
baumannii Naval-81]
gi|400392354|gb|EJP59400.1| FAD dependent oxidoreductase domain protein [Acinetobacter
baumannii Naval-81]
Length = 179
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 15/185 (8%)
Query: 304 MHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQ 363
M + + T+ ++P++P+KGHL + + + L + H + Y Q G
Sbjct: 1 MANGIHATDFFPELPIEPKKGHLAITDRYPELNVKHTLVALAYAAS-------TQATSG- 52
Query: 364 ILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFIS 423
+S++ G L +GSSRQF + VE + R+ K A +++P L DL +
Sbjct: 53 -ISVACNIQPRPTGQLFIGSSRQFNTVDPTVEPEVFTRVLKEAVDYFPALADLNVI---- 107
Query: 424 NRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKV 483
+ G R PDG PVIG P V+LA GHEGLG++ A GTA L+A + +
Sbjct: 108 --RAWTGFRAATPDGIPVIGRHPAFQSVYLAVGHEGLGVTTATGTARLIASHICGLTFDI 165
Query: 484 DSAPF 488
D PF
Sbjct: 166 DPEPF 170
>gi|398999753|ref|ZP_10702487.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM18]
gi|398131124|gb|EJM20451.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM18]
Length = 419
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 180/445 (40%), Gaps = 87/445 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DVII G G+IG + A QL L VA++D P AT A G +W + + G
Sbjct: 5 YDVIIAGGGVIGASCAYQLSKRKHLKVALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRD-QGLDPL 165
+D AL+SN ++ L L+D G+D
Sbjct: 64 IFFRMMSANRKREAQGAAVAVDAGTPHILPQSFFDFALQSNAMYPDLHRELQDNHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L +AEP V ++R
Sbjct: 122 --FKFEKTGLKFVIYDDEDRLYAEHIVACIPHLADQVRWLDQAALREAEPS--VSHEARG 177
Query: 226 AF-LPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
A D Q+ LA AY E A + +++ VT +L S +V VQTS+
Sbjct: 178 ALEFLCDHQVSPFRLADAYTEG-----ARQNGVDLYFNTNVTGVLHHGS--QVTGVQTSE 230
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
++ ++ AAG W+ L E + IPVKP KG +L+ E + +
Sbjct: 231 AGVFHCHTLINAAGAWAADL-----SEQATGIRIPVKPVKGQILLTERMPKILRGCLTTS 285
Query: 344 AGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIW 403
YV D +G+IL +GS+ + GF+ I +
Sbjct: 286 DCYVAQKD---------NGEIL---------------IGSTTEDKGFDVTTTYAEISGLV 321
Query: 404 KRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLS 463
+ A P L D+ L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 322 QGAVRCIPALADINL------KRCWAGLRPGSPDELPILGPMKGVQGYLNACGHFRTGIL 375
Query: 464 LALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V PL +D PF
Sbjct: 376 TSAITGVLLDKLVNNEPLPLDITPF 400
>gi|153954675|ref|YP_001395440.1| hypothetical protein CKL_2057 [Clostridium kluyveri DSM 555]
gi|219855145|ref|YP_002472267.1| hypothetical protein CKR_1802 [Clostridium kluyveri NBRC 12016]
gi|146347533|gb|EDK34069.1| Hypothetical protein CKL_2057 [Clostridium kluyveri DSM 555]
gi|219568869|dbj|BAH06853.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 401
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 172/414 (41%), Gaps = 45/414 (10%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEI 139
+ FDV +IGAG IG ++A L SVA++D G++ + + PG +
Sbjct: 3 NIFDVTVIGAGAIGTSVAYHL-AEKGFSVAIIDSGDIAHGSSSHCDAVALICDKKPGIDT 61
Query: 140 WDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
+ S +K L++ + Q G L + T E V + G
Sbjct: 62 -KMGAASIAHYKELSEKFSYD-------FEFDQKGCLYVCETEAEYEAASSYVAEQQRDG 113
Query: 200 LRAEYLSSSDLLQAEPEL---MVG---EDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+ S L EP L MVG AA PY + A+IE+G +
Sbjct: 114 YDMSMIDSKMLQDMEPYLAEDMVGGIWTPGDAAMSPYK------VCFAFIEEGKKLGLEV 167
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
Y ++ S EVE + + + +KK I+ AG W+ ++ D+ +
Sbjct: 168 FTYCNIKE------IKLGSNNEVEKIIFDEGEIITKK-IINCAGVWA-PIIGDM-----V 214
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV--GHHDLTLHPGQVNHGQILSISMTA 371
+DIP++PRKG LV E + H +E GY+ D+ + +++
Sbjct: 215 GIDIPIQPRKGMNLVSEKTKKIVF-HKILEFGYMMSKFDDINFKRNVSALVEEYNVAFNI 273
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDL-CLADFISNRKVRIG 430
N++LG R F GF+ E + I +R F+P L+D+ C+ + G
Sbjct: 274 EYTHAENILLGGYRGFRGFDNRSEIEAMKAIAERGLRFFPCLKDVNCIRSYA-------G 326
Query: 431 LRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVD 484
+RP++ D P++ V + ++A GHEG G+ L+ T +L+A M D
Sbjct: 327 VRPFVEDHLPIVSEVNEIPGFYIAAGHEGDGICLSPITGKLMAQMAAGEETDFD 380
>gi|413964812|ref|ZP_11404038.1| FAD dependent oxidoreductase [Burkholderia sp. SJ98]
gi|413927486|gb|EKS66775.1| FAD dependent oxidoreductase [Burkholderia sp. SJ98]
Length = 379
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 173/389 (44%), Gaps = 64/389 (16%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
++V V+D GAT AG G+I +++ +P + LA S +LW L LR++
Sbjct: 26 MTVDVLDAGGIGGGATAAGMGHIVVMNDSPAE--FALARASRELWLALGPQLRERD---- 79
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL-------M 218
+ + G+L I EEL + AG+RA + + L ++EP + +
Sbjct: 80 ---AFSRCGTLWIAEDDEELDAARAMRDAFAAAGVRAHMVDRAALRESEPSVSHAMQGGL 136
Query: 219 VGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS-NSTGEVE 277
+ +D + P +Q + R S G C + S ++ G
Sbjct: 137 LIDDDAIVYAPAAAQW-------LLASSTRIRVSTG-----------CAVHSVDAAGAHA 178
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
V + + +V+A G L +++ +P++ +KGHLL+ + + +
Sbjct: 179 RVTLANGERRTAAHVVIANG----------LAAPDLIAGLPLEAKKGHLLITDRYPG-TV 227
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
H +E GY+ +H + S++ A G +++GSSRQF + VE
Sbjct: 228 RHQVLELGYIK---------SAHHARGTSVAFNAQPRPTGQVLIGSSRQFGTLDPAVEMN 278
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPV--PGLSKVFLAT 455
++ + RA + P + L + + G R PDG P+IGP PG +++LA
Sbjct: 279 VLAMMLARATRYLPGIGGL------NAIRAWTGFRAATPDGLPLIGPARFPG-DRLWLAA 331
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVD 484
GHEGLG++ +LGTA+L+ +L PL D
Sbjct: 332 GHEGLGVTTSLGTAKLLVAQMLGEPLAFD 360
>gi|220904950|ref|YP_002480262.1| FAD dependent oxidoreductase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869249|gb|ACL49584.1| FAD dependent oxidoreductase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 401
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 105/207 (50%), Gaps = 23/207 (11%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
G + AV+T K +Y+ +V+AAG W+ L H L +PV+PR+GH+LV E
Sbjct: 183 GRITAVETDKGRIYAAN-VVLAAGVWTPGLAH------MAGLAVPVRPRQGHVLVTERVR 235
Query: 334 SLKLNHASMEAGYV----GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAG 389
+L + E GY+ G T+ P G ++ G ++LGSSR++ G
Sbjct: 236 NL-VGKNYAEYGYLLAKGGKTRDTITPEMEQFG----VAFVLEPSHAGTVLLGSSRRYVG 290
Query: 390 FNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLS 449
+ ++ I +RA FYP L L + GLRP PD KP+I P +
Sbjct: 291 MDIRPNPAVMRAIAQRARHFYPSLAQTRLI------RCYAGLRPCTPDAKPIISPTH-IK 343
Query: 450 KVFLATGHEGLGLSLALGTAELVADMV 476
+F+ATGHEG G+ L+L T L+A+MV
Sbjct: 344 GLFVATGHEGNGIGLSLITGRLIAEMV 370
>gi|398984308|ref|ZP_10690543.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM24]
gi|399014311|ref|ZP_10716603.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM16]
gi|398111297|gb|EJM01185.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM16]
gi|398155840|gb|EJM44270.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM24]
Length = 419
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 182/445 (40%), Gaps = 87/445 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG + A QL +L VA++D P AT A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASCAYQLSKRKNLKVALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRD-QGLDPL 165
+D AL+SN L+ L L+D G+D
Sbjct: 64 IFFRMMSANRKRETQGAAVAVDASTPHILPESFFDFALQSNALYPALHRELKDNHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L +AEP V ++R
Sbjct: 122 --FKFEKTGLKFVIYDDEDRLYAEHIVGCIPHLADQVRWLDQAALREAEPS--VSHEARG 177
Query: 226 AF-LPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
A D Q+ LA AY+E A + F + VT +L S V VQT++
Sbjct: 178 ALEFLCDHQVSPFRLADAYMEG-----ARQNGVDIFVNTNVTGVLHHGS--RVTGVQTAE 230
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
++ K ++ A G W+ L E + IPVKP KG +L+ E + +
Sbjct: 231 EGVFHCKTLINAGGAWAADL-----SEWATGIRIPVKPVKGQILLTERMPKILNGCLTTS 285
Query: 344 AGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIW 403
YV D +G+IL +GS+ + GF+ I +
Sbjct: 286 DCYVAQKD---------NGEIL---------------IGSTTEDKGFDVTTTYPEIAGLV 321
Query: 404 KRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLS 463
+ A P+L+D+ L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 322 QGAVRCLPELKDVNL------KRTWAGLRPGSPDELPILGPMRGVEGYLNACGHFRTGIL 375
Query: 464 LALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V PL +D PF
Sbjct: 376 TSAITGVLLDKLVNDEPLPLDITPF 400
>gi|423094827|ref|ZP_17082623.1| hydrogen cyanide synthase HcnC [Pseudomonas fluorescens Q2-87]
gi|397889029|gb|EJL05512.1| hydrogen cyanide synthase HcnC [Pseudomonas fluorescens Q2-87]
Length = 420
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 188/446 (42%), Gaps = 89/446 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMV---------- 131
+DVII G G+IG + A QL + L +A++D P AT A G +W +
Sbjct: 5 YDVIIAGGGVIGASCAYQLSKRTHLKIALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 132 -----------HRTPGSEI--------------WDLALRSNKLWKMLA-DSLRDQGLDPL 165
+T GS + +D AL+SN ++ L + L + G+D
Sbjct: 64 IFFRMMSADRKRKTQGSAVAVDASTPHILPQSFFDFALQSNAMYPQLHRELLENHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L +AEP V ++R
Sbjct: 122 --CKFERTGLKFVIYDDEDRLYAEHIVACIPHLADQVRWLDQAALREAEPS--VSHEARG 177
Query: 226 A--FLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS 282
A FL D Q+ LA AY E ++ F++ VT +LR + V V+T+
Sbjct: 178 ALEFL-CDHQVSPFRLADAYTEGARQNGVDI-----FFNTNVTEVLREGT--RVTGVETA 229
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
+ + + ++ AAG W+ L E + IPVKP KG +L+ E + +
Sbjct: 230 EAGTFHCRTLINAAGAWAADL-----SEQATGVRIPVKPVKGQILLTERMPKILNGCLTT 284
Query: 343 EAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRI 402
YV D +G+IL +GS+ + GF+ I+ +
Sbjct: 285 SDCYVAQKD---------NGEIL---------------IGSTTEDKGFDVTTTYPEIEGL 320
Query: 403 WKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGL 462
+ A P+L D+ L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 321 VQGAVRCIPQLADINL------KRTWAGLRPGSPDELPILGPMCGVEGYLNACGHFRTGI 374
Query: 463 SLALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V PL +D PF
Sbjct: 375 LTSAITGVLLDKLVNNEPLPLDITPF 400
>gi|228965779|ref|ZP_04126855.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228793903|gb|EEM41430.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 342
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 164/354 (46%), Gaps = 46/354 (12%)
Query: 131 VHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKE 190
+ + PG + ++L S KL L++ L ++ GS+L+ + EE+ ++
Sbjct: 3 IDKDPGFD-SQMSLVSQKLVTDLSEKLE-------HSFEYRAPGSILVCESDEEMEAAQQ 54
Query: 191 RVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKG 246
V + EAGL L D+ + P +L+ G + DS ++ L +
Sbjct: 55 WVDRQKEAGLPFRMLDRQDIREESPFFADDLLGGLECAT-----DSTVNPYLLAFSLLSE 109
Query: 247 NRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMH 305
+ F +K F V + + +N + VE + N ++ K +V AAG W+ +
Sbjct: 110 AQKFGAKA----FKQTEVKSMKIETNGSFVVE----TTNGTFTAKQVVNAAGVWAPKIGQ 161
Query: 306 DLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQIL 365
L ++IP++PRKGH++V + ME GY+ ++ G+ +
Sbjct: 162 ML------NVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL----ISKFGGKRKVDALT 210
Query: 366 S---ISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFI 422
+++ + N ++GSSR+F GF+T + +I I RA FYPK+ D+ +
Sbjct: 211 EKYGVALVFESTESQNFLIGSSREFVGFHTRINNEVIKCIANRAIRFYPKMADMMVI--- 267
Query: 423 SNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
+ GLRP+ D P+I V + F+A GHEG G+SLA T +++ +++
Sbjct: 268 ---RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGDGISLAAVTGKVIEELL 318
>gi|229046534|ref|ZP_04192187.1| Sarcosine oxidase, beta subunit [Bacillus cereus AH676]
gi|228724798|gb|EEL76102.1| Sarcosine oxidase, beta subunit [Bacillus cereus AH676]
Length = 342
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 167/358 (46%), Gaps = 54/358 (15%)
Query: 131 VHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKE 190
+ + PG + ++L S KL L++ L ++ GS+L+ + EE+ ++
Sbjct: 3 IDKDPGFD-SQMSLVSQKLVTDLSEELE-------HSFEYRAPGSILVCESDEEMEAAQQ 54
Query: 191 RVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGED--SRAAFLPYDSQLDAMLAVAYIE 244
V + EAGL L D+ + P +L+ G + + + PY +LA + +
Sbjct: 55 WVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLECATDSTVNPY------LLAFSLLS 108
Query: 245 KGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSL 303
K + F +K F V + + +N + VE + N ++ + +V AAG W+ +
Sbjct: 109 KAQK-FGTKA----FKQTEVKSINIDTNGSFVVE----TTNGTFTAQQVVNAAGVWAPKI 159
Query: 304 MHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV-----GHHDLTLHPGQ 358
L ++IP++PRKGH++V + ME GY+ G + +
Sbjct: 160 GQML------NVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYLISKFGGKRKVDALTEK 212
Query: 359 VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCL 418
+G L T + N ++GSSR+F GF+T + +I I RA FYPK+ D+ +
Sbjct: 213 --YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNEVIKCIANRAIRFYPKMADMMV 266
Query: 419 ADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
+ GLRP+ D P+I V + F+A GHEG G+SLA T +++ +++
Sbjct: 267 I------RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGDGISLAAVTGKVIEELL 318
>gi|228901376|ref|ZP_04065566.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis IBL 4222]
gi|228858242|gb|EEN02712.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis IBL 4222]
Length = 342
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 163/356 (45%), Gaps = 50/356 (14%)
Query: 131 VHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKE 190
+ + PG + ++L S KL L++ L ++ GS+L+ + EE+ ++
Sbjct: 3 IDKDPGFD-SQMSLVSQKLVTDLSEKLE-------HSFEYRAPGSILVCESDEEMEAAQQ 54
Query: 191 RVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKG 246
V + EAGL L D+ + P +L+ G + DS ++ L +
Sbjct: 55 WVDRQKEAGLPFRMLDRQDIREESPFFADDLLGGLECAT-----DSTVNPYLLAFSLLSE 109
Query: 247 NRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMH 305
+ F +K F V + + +N + VE + N ++ K +V AAG W+ +
Sbjct: 110 AQKFGAKA----FKQTEVKSMKIETNGSFVVE----TTNGTFTAKQVVNAAGVWAPKIGQ 161
Query: 306 DLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV-----GHHDLTLHPGQVN 360
L ++IP++PRKGH++V + ME GY+ G + +
Sbjct: 162 ML------NVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYLISKFGGKRKVDALTEK-- 212
Query: 361 HGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLAD 420
+G L T + N ++GSSR+F GF+T + +I I RA FYPK+ D+ +
Sbjct: 213 YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNEVIKCIANRAIRFYPKMADMMVI- 267
Query: 421 FISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
+ GLRP+ D P+I V + F+A GHEG G+SLA T +++ +++
Sbjct: 268 -----RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGDGISLAAVTGKVIEELL 318
>gi|416887195|ref|ZP_11922717.1| hypothetical protein PA15_31656, partial [Pseudomonas aeruginosa
152504]
gi|334833260|gb|EGM12395.1| hypothetical protein PA15_31656 [Pseudomonas aeruginosa 152504]
Length = 335
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 168/390 (43%), Gaps = 66/390 (16%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGI+G A +L L V V+D GAT G G++ + P +L
Sbjct: 4 EVIVVGAGIVGSACAHEL-ARRGLDVLVLDSRR--GGATAVGMGHLVAMDDNPA----EL 56
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S + W+ A L + ++ G+L + EL + + + L AG+
Sbjct: 57 ALSDYSIQAWRAWAADLPED-------CAYRNCGTLWLAADASELAEAERKRQALQAAGV 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
L ++ L EP L G LA A G+ + A +
Sbjct: 110 ACRMLGAARLYALEPALRPG-----------------LAGALEVSGDGILYAP-NAARWL 151
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTL-----YSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
D LR EV V S+ L S +A+V+A G +G E+
Sbjct: 152 LDQAGPRLR-RLYAEVSEVDGSRLRLADGRWLSAEALVLANGIHAG----------ELCA 200
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
++P++P+KGHLL+ + + L H +E GYV + S++ A
Sbjct: 201 ELPIRPKKGHLLITDRYPG-TLRHQLVELGYVS---------SAHASSGTSVAFNAQPRP 250
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G + LGSSRQF + +VE ++ R+ +RA ++ P L L + + G R
Sbjct: 251 TGQVFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGL------NAIRAWTGFRAAT 304
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLA 465
PDG P++G P ++LA GHEGLG++ A
Sbjct: 305 PDGLPLLGEHPAQPGLWLAVGHEGLGVTTA 334
>gi|229097351|ref|ZP_04228313.1| Sarcosine oxidase, beta subunit [Bacillus cereus Rock3-29]
gi|423442407|ref|ZP_17419313.1| hypothetical protein IEA_02737 [Bacillus cereus BAG4X2-1]
gi|423534820|ref|ZP_17511238.1| hypothetical protein IGI_02652 [Bacillus cereus HuB2-9]
gi|228686162|gb|EEL40078.1| Sarcosine oxidase, beta subunit [Bacillus cereus Rock3-29]
gi|402414259|gb|EJV46592.1| hypothetical protein IEA_02737 [Bacillus cereus BAG4X2-1]
gi|402462551|gb|EJV94256.1| hypothetical protein IGI_02652 [Bacillus cereus HuB2-9]
Length = 391
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 175/383 (45%), Gaps = 56/383 (14%)
Query: 107 SVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQ 166
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 28 DVTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------H 79
Query: 167 VIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGED 222
++ GS+L+ + EE+ ++ V + +AGL L D+ + P +L+ G +
Sbjct: 80 SFEYRAPGSILVCESDEEMEAAQQWVNRQKDAGLPFRMLDRQDIREESPFFADDLLGGLE 139
Query: 223 --SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQ 280
+ + PY +LA + + + + A + E ++ + G V+
Sbjct: 140 CATDSTVNPY------LLAFSLLAESKKMGAKAINHTEVKE------MKRDIDGSF-IVE 186
Query: 281 TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHA 340
T+ T ++ K IV AAG W+ + L ++IP++PRKGH++V +
Sbjct: 187 TTNGT-FTAKQIVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV 239
Query: 341 SMEAGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
ME GY+ ++ G+ +G L T + N ++GSSR+F G +T
Sbjct: 240 -MEFGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGVHTR 290
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ +I I RA FYPK+ D+ + + GLRP+ D P+I V + ++
Sbjct: 291 INNEVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVDHIPNYYI 344
Query: 454 ATGHEGLGLSLALGTAELVADMV 476
A GHEG G+SLA T +++ +++
Sbjct: 345 AAGHEGDGISLAAVTGKVIEELL 367
>gi|407705260|ref|YP_006828845.1| ABC transporter permease [Bacillus thuringiensis MC28]
gi|407382945|gb|AFU13446.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis MC28]
Length = 391
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 174/383 (45%), Gaps = 56/383 (14%)
Query: 107 SVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQ 166
V +++K SG + G I + + PG + ++L S KL L++ L
Sbjct: 28 DVTIIEKGEFVSGTSSRCDGNILAIDKDPGFD-SQMSLVSQKLVTDLSEELE-------H 79
Query: 167 VIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGED 222
++ GS+L+ + EE+ ++ V + + GL L D+ + P +L+ G +
Sbjct: 80 SFEYRAPGSILVCESDEEMEAAQQWVNRQKDVGLPFRMLDRQDIREESPFFADDLLGGLE 139
Query: 223 --SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQ 280
+ + PY +LA + + + + A + E ++ + G V+
Sbjct: 140 CATDSTVNPY------LLAFSLLAESKKMGAKAINHTEVKE------MKRDIDGSF-IVE 186
Query: 281 TSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHA 340
T+ T ++ K +V AAG W+ + L ++IP++PRKGH++V +
Sbjct: 187 TTNGT-FTAKQVVNAAGVWAPKIGQML------DVNIPIEPRKGHIIVASRQQHVGCRKV 239
Query: 341 SMEAGYVGHHDLTLHPGQ-------VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
ME GY+ ++ G+ +G L T + N ++GSSR+F GF T
Sbjct: 240 -MEFGYL----ISKFGGKRKVDALTEKYGVALVFEPTESQ----NFLIGSSREFVGFYTR 290
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ +I I RA FYPK+ D+ + + GLRP+ D P+I V + ++
Sbjct: 291 INNEVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTEDHLPIISRVDHIPNYYI 344
Query: 454 ATGHEGLGLSLALGTAELVADMV 476
A GHEG G+SLA T +++ +++
Sbjct: 345 AAGHEGDGISLAAVTGKVIEELL 367
>gi|336118090|ref|YP_004572858.1| oxidoreductase [Microlunatus phosphovorus NM-1]
gi|334685870|dbj|BAK35455.1| putative oxidoreductase [Microlunatus phosphovorus NM-1]
Length = 390
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 189/416 (45%), Gaps = 38/416 (9%)
Query: 73 ITASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVH 132
+T ++ T DV++IGAG +G A L V VV++ SG + A +G +
Sbjct: 6 VTPAAGDTTADVVVIGAGAVGSACA-YFAARHGLRVHVVERGQIVSGTSSACEGNMLNSD 64
Query: 133 RTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERV 192
+ G E+ +LA S+ L+ D L +++ G + + T L E
Sbjct: 65 KDAGPEL-ELAKYSHALYGT--DLAEHNAL-----WEYERKGGIAVAATEAGAAGLAELT 116
Query: 193 KQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS 252
+ +G+ A L + L EP + + A+ P D+Q+ ML A++ + R +
Sbjct: 117 TRQRASGVEAIDLPADRLRDFEPHISP-DLCSGAYYPEDAQVQPMLLAAHLLRLARGLGA 175
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312
+ V LR V V+T + S A++ AAG WSGS+
Sbjct: 176 VVQTGA----EVIGFLRDGD--RVTGVRTRIGEV-SADAVINAAGTWSGSIAK------L 222
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+ +P+ PR+G +LV E L + H +A YV + + G + + ++
Sbjct: 223 AGVKLPILPRRGFVLVTEPL-PLTIRHKVYDADYVANV-------LSSDGGLQTSTVVEG 274
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
TD G +++GSSR+ GF+ V ++ I +A +P L + + + +G R
Sbjct: 275 TDS-GTVLIGSSRERVGFDRTVSLPVMAEIAAKAVALFPMLASVKV------MRSYLGFR 327
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PY D +PVIGP P ++ A+GHEG G+ L+ GT +L+A +L P +D PF
Sbjct: 328 PYSADHQPVIGPDPRAPGLWHASGHEGAGIGLSAGTGKLLAQSILGQPTDLDLTPF 383
>gi|295699989|ref|YP_003607882.1| FAD dependent oxidoreductase [Burkholderia sp. CCGE1002]
gi|295439202|gb|ADG18371.1| FAD dependent oxidoreductase [Burkholderia sp. CCGE1002]
Length = 383
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 159/359 (44%), Gaps = 59/359 (16%)
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
L+ S +LW LA LR + + + G+L I EE + G+
Sbjct: 60 LSRYSRELWLELAPQLRTRD-------AFARCGTLWIAADDEEWQAARAMHAAFVSQGVA 112
Query: 202 AEYLSSSDLLQAEPEL---MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE 258
A+ + ++DL EP L M G + +DS + A A ++ + H A+
Sbjct: 113 AQLVDAADLRACEPALAPSMAG----GLRIEHDSIVYAPTAAEWLLARSPHAANIS---- 164
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
L S ++ + V + S +VVA G L ++++ +P
Sbjct: 165 ------VRLGASVASIDAGGVVLASGERISAAHVVVANG----------LGASQLLPSLP 208
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + L + H +E GY+ +H S++ A G
Sbjct: 209 MQPKKGHLLITDRYPGL-IRHQLLELGYIK---------SAHHATGTSVAFNAQPRPTGQ 258
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++GSSRQF + VE ++ ++ +RAA++ P L L S + G R PDG
Sbjct: 259 LLIGSSRQFETTDPAVEMPVLAQMLQRAAQYLPALPTL------SGIRAWTGFRAASPDG 312
Query: 439 KPVIGPVP---------GLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P+IGP +S+V+LA GHEGLG++ +L TA+L+A + + + P+
Sbjct: 313 LPLIGPAGEFAPDVGSGSMSRVWLAVGHEGLGVTTSLATAKLLAAQITGHAAPIPFEPY 371
>gi|330810221|ref|YP_004354683.1| hydrogen cyanide synthase HcnC [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423697868|ref|ZP_17672358.1| hydrogen cyanide synthase HcnC [Pseudomonas fluorescens Q8r1-96]
gi|327378329|gb|AEA69679.1| Putative hydrogen cyanide synthase HcnC [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|388005022|gb|EIK66289.1| hydrogen cyanide synthase HcnC [Pseudomonas fluorescens Q8r1-96]
Length = 419
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 181/444 (40%), Gaps = 85/444 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG + A QL L VA++D P AT A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASCAYQLSKRKHLKVALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRD-QGLDPL 165
+D AL+SN ++ L L D G+D
Sbjct: 64 IFFRMMSANRKRQTQGAAVAVDASTPHILPQSFFDFALQSNAMYPQLHRELIDNHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L +AEP +
Sbjct: 122 --FKFEETGLKFVIYDDEDRLYAEHIVACIPHLADQVRWLDQAALREAEPNVSHEALGAL 179
Query: 226 AFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKN 284
FL D Q+ LA AY E A + F++ VT +LRS + V V+T++
Sbjct: 180 EFL-CDHQVSPFRLADAYTEG-----ARQNGVDLFFNTSVTEVLRSGT--RVTGVKTAEA 231
Query: 285 TLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEA 344
++ + ++ AAG W+ L E + IPVKP KG +L+ E + +
Sbjct: 232 GTFNCRTLINAAGAWAADL-----SEQATGVRIPVKPVKGQILLTERMPKILNGCLTTSD 286
Query: 345 GYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWK 404
YV D +G+IL +GS+ + GF+ I+ + +
Sbjct: 287 CYVAQKD---------NGEIL---------------IGSTTEDKGFDVTTTYPEIEGLVQ 322
Query: 405 RAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
A P+L D+ L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 323 GAVRCIPQLVDINL------KRTWAGLRPGSPDELPILGPMRGVEGYLNACGHFRTGILT 376
Query: 465 ALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V PL +D PF
Sbjct: 377 SAITGVLLDKLVNNEPLPLDITPF 400
>gi|416868497|ref|ZP_11916187.1| putative D-amino acid oxidase, partial [Pseudomonas aeruginosa
138244]
gi|334833376|gb|EGM12488.1| putative D-amino acid oxidase [Pseudomonas aeruginosa 138244]
Length = 338
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 175/391 (44%), Gaps = 60/391 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGI+G A +L L V V+D GAT G G++ + P +L
Sbjct: 4 EVIVVGAGIVGSACAHEL-ARRGLDVLVLDSRR--GGATAVGMGHLVAMDDNPA----EL 56
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S + W+ A L + ++ G+L + EL + + + L AG+
Sbjct: 57 ALSDYSIQAWRTWAADLPED-------CAYRNCGTLWLAADAAELAEAERKRQALLAAGV 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E L ++ L EP L G + A +P D L A A ++ G
Sbjct: 110 ACEMLDAARLRDLEPVLRPGL-AGALKVPGDGILYAPNAARWL------LERAGPRLRRL 162
Query: 261 HDPVTCLLRSNSTGEVEA--VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
H V+ EV+ ++ + S +A+V+A G +G E+ ++P
Sbjct: 163 HAEVS---------EVDGSRLRLADGRWLSAEALVLANGIHAG----------ELCAELP 203
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + L H +E GYV + S++ A G
Sbjct: 204 IRPKKGHLLITDRYPG-TLRHQLVELGYVS---------SAHASSGTSVAFNAQPRPTGQ 253
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+ LGSSRQF + +VE ++ R+ +RA ++ P L L + + G R PDG
Sbjct: 254 VFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGL------NAIRAWTGFRAATPDG 307
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTA 469
P++G P ++LA GHEGLG++ A G+A
Sbjct: 308 LPLLGEHPAQPGLWLAVGHEGLGVTTAPGSA 338
>gi|345872226|ref|ZP_08824164.1| Glycine oxidase [Thiorhodococcus drewsii AZ1]
gi|343919307|gb|EGV30057.1| Glycine oxidase [Thiorhodococcus drewsii AZ1]
Length = 364
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 73/420 (17%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGS 137
DV++IG GIIGL AR+L + V +++ ++ AG G Y W
Sbjct: 3 DVLVIGGGIIGLLTAREL-ADAGAQVTLIEMGQTGRESSWAGGGILSPLYPWRY----AD 57
Query: 138 EIWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+ +L S + + L +L D+ G+DP + +G L++ +EL + + +
Sbjct: 58 AVSELVSWSQEAYPRLTTALYDETGIDPEFTV----SGLLMLDALDDELALAMDWGARY- 112
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGR 255
G+ E + + L + EP+L + +D A LP +Q+ A LA A + R + R
Sbjct: 113 --GVHMETILGAKLHEREPQLELRQDP-ALLLPDIAQVRAPRLAKAVRQSLERRIQIRER 169
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
+ V LL N G+ V+T K + ++K V+ AG W+ L+ L EI
Sbjct: 170 ------EEVLELLVEN--GQATGVRTPKGKILAQKT-VICAGAWTAKLLEQLGNAPEI-- 218
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
P +G +L+ + GH PGQ+NH I++ V
Sbjct: 219 ----HPVRGQMLL-----------------FFGH------PGQINH-----ITLQREHYV 246
Query: 376 I----GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
I G ++ GS+ + AGF + +++ A E +P L+ + D + GL
Sbjct: 247 IPRRDGRVLFGSTMEHAGFAKSTTAEAKEALYRTAVELFPILKRTPIEDHWA------GL 300
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
RP P G P IG PG+ ++ GH GL A +A L+AD++L P + P+A++
Sbjct: 301 RPGSPSGIPYIGHYPGVEGLYFNAGHYRNGLVAAPASARLLADLLLQRPPILAPDPYALE 360
>gi|229128178|ref|ZP_04257159.1| Sarcosine oxidase, beta subunit [Bacillus cereus BDRD-Cer4]
gi|228655037|gb|EEL10894.1| Sarcosine oxidase, beta subunit [Bacillus cereus BDRD-Cer4]
Length = 330
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 158/345 (45%), Gaps = 49/345 (14%)
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
++L S KL L++ L ++ GS+L+ + EE+ ++ V + EAGL
Sbjct: 1 MSLVSQKLVTDLSEELE-------HAFEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLP 53
Query: 202 AEYLSSSDLLQAEP----ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
L D+ + P +L+ G + DS ++ L + + F +K
Sbjct: 54 FRMLDRQDIREESPFFADDLLGGLECAT-----DSTVNPYLLAFSLLSEAQKFGAKA--- 105
Query: 258 EFYHDPVTCL-LRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
F V + + +N + VE + N ++ + +V AAG W+ + L ++
Sbjct: 106 -FKQTEVKSINIDTNGSFVVE----TTNGTFTAQQVVNAAGVWAPKIGQML------NVN 154
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYV-----GHHDLTLHPGQVNHGQILSISMTA 371
IP++PRKGH++V + ME GY+ G + + +G L T
Sbjct: 155 IPIEPRKGHIIVASRQQHVGCRKV-MEFGYLISKFGGKRKVDALTEK--YGVALVFEPTE 211
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
+ N ++GSSR+F GF+T + +I I RA FYPK+ D+ + + GL
Sbjct: 212 SQ----NFLIGSSREFVGFHTRINNEVIKCIANRAIRFYPKMADMMVI------RSYAGL 261
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
RP+ D P+I V + F+A GHEG G+SLA T +++ +++
Sbjct: 262 RPWTEDHLPIISRVEHIPNYFIAAGHEGDGISLAAVTGKVIEELL 306
>gi|229151045|ref|ZP_04279255.1| Sarcosine oxidase, beta subunit [Bacillus cereus m1550]
gi|228632422|gb|EEK89041.1| Sarcosine oxidase, beta subunit [Bacillus cereus m1550]
Length = 342
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 160/353 (45%), Gaps = 44/353 (12%)
Query: 131 VHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKE 190
+ + PG + ++L S KL L++ L ++ GS+L+ + EE+ ++
Sbjct: 3 IDKDPGFD-SQMSLVSQKLVTDLSEELE-------HSFEYRAPGSILVCESDEEMEAAQQ 54
Query: 191 RVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRH 249
V + EAGL L D+ + P ED DS ++ L + +
Sbjct: 55 WVNRQKEAGLPFRMLDRQDIREESP--FFAEDLLGGLECATDSTVNPYLLAFSLLSEAQK 112
Query: 250 FASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLL 308
F +K F V + + ++ + VE + N ++ + +V AAG W+ + L
Sbjct: 113 FGAKA----FKQTEVKSMEIETDGSFVVE----TTNGTFTAQQVVNAAGVWAPKIGQML- 163
Query: 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV-----GHHDLTLHPGQVNHGQ 363
++IP++PRKGH++V + ME GY+ G + + +G
Sbjct: 164 -----NINIPIEPRKGHIIVASRQQHVGCRKV-MEFGYLISKFGGKRKVDALTEK--YGV 215
Query: 364 ILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFIS 423
L T + N ++GSSR+F GF+T + +I I RA FYPK+ D+ +
Sbjct: 216 ALVFEPTESQ----NFLIGSSREFVGFHTRINNEVIKCIANRAIRFYPKMADMMVI---- 267
Query: 424 NRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
+ GLRP+ D P+I V + F+A GHEG G+SLA T +++ +++
Sbjct: 268 --RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGDGISLAAVTGKVIEELL 318
>gi|228959066|ref|ZP_04120766.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228800575|gb|EEM47492.1| Sarcosine oxidase, beta subunit [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 342
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 163/356 (45%), Gaps = 50/356 (14%)
Query: 131 VHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKE 190
+ + PG + ++L S KL L++ L ++ GS+L+ + EE+ ++
Sbjct: 3 IDKDPGFD-SQMSLVSQKLVTDLSEELE-------HSFEYRAPGSILVCESDEEMEAAQQ 54
Query: 191 RVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKG 246
V + EAGL L D+ + P +L+ G + DS ++ L +
Sbjct: 55 WVNRQKEAGLPFRMLDRQDIREESPFFADDLLGGLECAT-----DSTVNPYLLAFSLLSE 109
Query: 247 NRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMH 305
+ F +K F V + + +N + VE + N ++ + +V AAG W+ +
Sbjct: 110 AQKFGAKA----FKQTEVKSINIDTNGSFVVE----TTNGTFTAQQVVNAAGVWAPKIGQ 161
Query: 306 DLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV-----GHHDLTLHPGQVN 360
L ++IP++PRKGH++V + ME GY+ G + +
Sbjct: 162 ML------NVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYLISKFGGKRKVDALTEK-- 212
Query: 361 HGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLAD 420
+G L T + N ++GSSR+F GF+T + +I I RA FYPK+ D+ +
Sbjct: 213 YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNEVIKCIANRAIRFYPKMADMMVI- 267
Query: 421 FISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
+ GLRP+ D P+I V + F+A GHEG G+SLA T +++ +++
Sbjct: 268 -----RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGDGISLAAVTGKVIEELL 318
>gi|126651471|ref|ZP_01723675.1| sarcosine oxidase, beta subunit [Bacillus sp. B14905]
gi|126591724|gb|EAZ85820.1| sarcosine oxidase, beta subunit [Bacillus sp. B14905]
Length = 406
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 166/389 (42%), Gaps = 44/389 (11%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L + +++K SG + G I + + PG + ++L S +L L L D +
Sbjct: 42 LDITILEKNELASGTSSRCDGNILAIDKDPGFDS-QMSLVSQRLVHELNREL-DMSFE-- 97
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
++ GS+L+ + E+ ++ V + EAGL L DL + E + +
Sbjct: 98 ----YRNPGSILVCESELEMEAAQQWVNRQQEAGLDFTMLDREDL-RNESKYFADDLYGG 152
Query: 226 AFLPYDSQLDA-MLAVAYIEKGNRHFASKGRYAEFYH---DPVTCLLRSNSTGEVEAVQT 281
DS ++ ML + + A + E H P L + G + A
Sbjct: 153 LECKTDSTVNPYMLTFSMFHSAEKLGAKIKKQTEVKHIKKQPDHTFLLETNDGWITA--- 209
Query: 282 SKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHAS 341
++ A G W+ + L +DIP+KPRKGH+LV + L
Sbjct: 210 --------NKVINACGIWAPFIGQML------DIDIPIKPRKGHILVASRQQPVGLRKV- 254
Query: 342 MEAGYVGHH---DLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTI 398
ME GY+ + + +G L T N ++GSSR+F GF+T+V +
Sbjct: 255 MEFGYLISKFGGERKVDADIEKYGVALVFEPTEAQ----NFLIGSSREFVGFDTKVNHDV 310
Query: 399 IDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHE 458
I +RA FYPK+ D+ + + GLRP+ D P+I V + ++A GHE
Sbjct: 311 AKMIARRAVRFYPKIADMSII------RTYAGLRPWTEDHLPIICEVEEVPGFYIAAGHE 364
Query: 459 GLGLSLALGTAELVADMVLTNPLKVDSAP 487
G G+SLA T +L+ +++ + + P
Sbjct: 365 GDGISLAAVTGKLIQELLQHKDTCIPTEP 393
>gi|225874815|ref|YP_002756274.1| oxidoreductase, FAD-dependent [Acidobacterium capsulatum ATCC
51196]
gi|225793255|gb|ACO33345.1| oxidoreductase, FAD-dependent [Acidobacterium capsulatum ATCC
51196]
Length = 377
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 184/413 (44%), Gaps = 52/413 (12%)
Query: 76 SSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTP 135
+S C DV+I+G GI+G A + + + + V VV+ V GAT AG G+I ++ +P
Sbjct: 2 TSSC---DVLILGGGIVGAACAMECAL-AGMKVIVVEADVVGGGATAAGMGHIVVMDDSP 57
Query: 136 GSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQL 195
E L S +LW +A L D + +++TG++ + EE++ + +
Sbjct: 58 --EQLALTQYSQQLWNQIAAELPDD-------VEYEKTGTIWVAANEEEMLEVNRKHALY 108
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
+ GL L + +L EP L G L D AV Y +F +
Sbjct: 109 SQCGLPLRILDAGELAHEEPNLRPG--LAGGLLVEDD------AVVYPPCAALYFLQRAM 160
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
A T L S GEV V S TL + + IV A G + + I
Sbjct: 161 QAGARLISQTAL--QASQGEV--VLKSGETLTAPR-IVNALGASAAA----------ITP 205
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
D+P++PRKGHL + + H +E GY+ G S++
Sbjct: 206 DLPIRPRKGHLAITGRAPGF-VRHQLVELGYIR---------SAGSGTADSVAFNVQPRK 255
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G L++GSSRQ+ + ++ I+ ++ ++ + P ++ L + + G R
Sbjct: 256 TGQLLIGSSRQYDANHPGIDHAILQQMLRQTLLYMPSVQPLTVL------RTWTGFRAAT 309
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
D P+IGP P + ++LATGHEGLG++ +L TA+++ + + + + P+
Sbjct: 310 ADKLPLIGPHPQDTSLYLATGHEGLGITTSLATAKILRHIFTGSSIDIPIEPY 362
>gi|378950287|ref|YP_005207775.1| protein HcnC [Pseudomonas fluorescens F113]
gi|359760301|gb|AEV62380.1| HcnC [Pseudomonas fluorescens F113]
Length = 419
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 180/444 (40%), Gaps = 85/444 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG + A QL L VA++D P AT A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASCAYQLSKRKHLKVALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRD-QGLDPL 165
+D AL+SN ++ L L D G+D
Sbjct: 64 IFFRMMSANRKRQTQGAAVAVDASTPHILPESFFDFALQSNAMYPQLHRELIDNHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L L +AEP +
Sbjct: 122 --FKFEETGLKFVIYDDEDRLYAEHIVACIPHLADQVRWLDQVALREAEPNVSHEALGAL 179
Query: 226 AFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKN 284
FL D Q+ LA AY E A + F++ VT +LRS + V V+T++
Sbjct: 180 EFL-CDHQVSPFRLADAYTEG-----ARQNGVDLFFNTSVTEVLRSGT--RVTGVKTAEA 231
Query: 285 TLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEA 344
++ + ++ AAG W+ L E + IPVKP KG +L+ E + +
Sbjct: 232 GTFNCRTLINAAGAWAADL-----SEQATGVRIPVKPVKGQILLTERMPKILNGCLTTSD 286
Query: 345 GYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWK 404
YV D +G+IL +GS+ + GF+ I+ + +
Sbjct: 287 CYVAQKD---------NGEIL---------------IGSTTEDKGFDVTTTYPEIEGLVQ 322
Query: 405 RAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
A P+L D+ L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 323 GAVRCIPQLADINL------KRTWAGLRPGSPDELPILGPMRGVEGYLNACGHFRTGILT 376
Query: 465 ALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V PL +D PF
Sbjct: 377 SAITGVLLDKLVNNEPLPLDITPF 400
>gi|228991647|ref|ZP_04151588.1| Sarcosine oxidase, beta subunit [Bacillus pseudomycoides DSM 12442]
gi|228768085|gb|EEM16707.1| Sarcosine oxidase, beta subunit [Bacillus pseudomycoides DSM 12442]
Length = 330
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 161/347 (46%), Gaps = 53/347 (15%)
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
++L S KL L++ L ++ GS+L+ + EE+ ++ V + EAGL
Sbjct: 1 MSLVSQKLVTELSEELEHS-------FEYRAPGSILVCESEEEMEAAQKWVNRQKEAGLP 53
Query: 202 AEYLSSSDLLQAEP----ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
L D+ + P +L+ G + DS ++ L + + +K
Sbjct: 54 FRMLDRQDIREESPFFADDLLGGLECAT-----DSTVNPYLLAFSLLAEAKKLGAKS--- 105
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
F H V + R+ + V+T+ T ++ K IV AAG W+ + L L I
Sbjct: 106 -FKHTEVKEMRRAIDGSFI--VETTNGT-FTAKQIVNAAGVWAPKIGEML------DLSI 155
Query: 318 PVKPRKGHLLVL---ENFNSLKLNHASMEAGYV-----GHHDLTLHPGQVNHGQILSISM 369
P++PRKGH++V ++ S K+ ME GY+ G + + +G L
Sbjct: 156 PIEPRKGHIIVASRQQHVGSRKV----MEFGYLISKFGGKRKVDALTEK--YGVALVFEP 209
Query: 370 TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI 429
T + N ++GSSR+F GF+T + +I I RA FYPK+ D+ + +
Sbjct: 210 TESQ----NFLIGSSREFVGFHTRINNEVIKCIANRAIRFYPKMADMMVI------RSYA 259
Query: 430 GLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
GLRP+ D P+I V + ++A GHEG G+SLA T +++ +++
Sbjct: 260 GLRPWTEDHLPIISRVEHIPNYYIAAGHEGDGISLAAVTGKVIEELL 306
>gi|218235277|ref|YP_002367555.1| glycine oxidase [Bacillus cereus B4264]
gi|218163234|gb|ACK63226.1| putative glycine oxidase [Bacillus cereus B4264]
Length = 330
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 155/342 (45%), Gaps = 43/342 (12%)
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
++L S KL L++ L ++ GS+L+ + EE+ ++ V + EAGL
Sbjct: 1 MSLVSQKLVTDLSEELEHS-------FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLP 53
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
L D+ + P ED DS ++ L + + F +K F
Sbjct: 54 FRMLDRQDIREESP--FFAEDLLGGLECATDSTVNPYLLAFSLLSEAQKFGAKA----FK 107
Query: 261 HDPVTCL-LRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
V + + ++ + VE + N ++ + +V AAG W+ + L ++IP+
Sbjct: 108 QTEVKSMEIETDGSFVVE----TTNGTFTAQQVVNAAGVWAPKIGQML------NINIPI 157
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYV-----GHHDLTLHPGQVNHGQILSISMTATTD 374
+PRKGH++V + ME GY+ G + + +G L T +
Sbjct: 158 EPRKGHIIVASRQQHVGCRKV-MEFGYLISKFGGKRKVDALTEK--YGVALVFEPTESQ- 213
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
N ++GSSR+F GF+T + +I I RA FYPK+ D+ + + GLRP+
Sbjct: 214 ---NFLIGSSREFVGFHTRINNEVIKCIANRAIRFYPKMADMMVI------RSYAGLRPW 264
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
D P+I V + F+A GHEG G+SLA T +++ +++
Sbjct: 265 TEDHLPIISRVEHIPNYFIAAGHEGDGISLAAVTGKIIEELL 306
>gi|228997750|ref|ZP_04157355.1| Sarcosine oxidase, beta subunit [Bacillus mycoides Rock3-17]
gi|228761992|gb|EEM10933.1| Sarcosine oxidase, beta subunit [Bacillus mycoides Rock3-17]
Length = 330
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 162/347 (46%), Gaps = 53/347 (15%)
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
++L S KL L++ L ++ GS+L+ + EE+ ++ V + EAGL
Sbjct: 1 MSLVSQKLVTELSEELEHS-------FEYRAPGSILVCESEEEMEAAQKWVNRQKEAGLP 53
Query: 202 AEYLSSSDLLQAEP----ELMVGED--SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
L D+ + P +L+ G + + + PY +LA + + + + A
Sbjct: 54 FRMLDRQDIREESPFFADDLLGGLECATDSTVNPY------LLAFSLLAEAEKLGAKS-- 105
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H V + R+ + V+T+ T ++ K IV AAG W+ + L L
Sbjct: 106 ---FKHTEVKEMRRAIDGSFI--VETTNGT-FTAKQIVNAAGVWAPKIGEML------DL 153
Query: 316 DIPVKPRKGHLLVL---ENFNSLKLNHASMEAGYVGHH---DLTLHPGQVNHGQILSISM 369
IP++PRKGH++V ++ S K+ ME GY+ + +G L
Sbjct: 154 SIPIEPRKGHIIVASRQQHVGSRKV----MEFGYLISKFGGKRKVDALTEKYGVALVFEP 209
Query: 370 TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI 429
T + N ++GSSR+F GF+T + +I I RA FYPK+ D+ + +
Sbjct: 210 TESQ----NFLIGSSREFVGFHTRINNEVIKCIANRAIRFYPKMADMMVI------RSYA 259
Query: 430 GLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
GLRP+ D P+I V + ++A GHEG G+SLA T +++ +++
Sbjct: 260 GLRPWTEDHLPIISRVEHIPNYYIAAGHEGDGISLAAVTGKVIEELL 306
>gi|229005289|ref|ZP_04163004.1| Sarcosine oxidase, beta subunit [Bacillus mycoides Rock1-4]
gi|228755928|gb|EEM05258.1| Sarcosine oxidase, beta subunit [Bacillus mycoides Rock1-4]
Length = 330
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 159/344 (46%), Gaps = 47/344 (13%)
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
++L S KL L++ L ++ GS+L+ + EE+ ++ V + EAGL
Sbjct: 1 MSLVSQKLVTELSEELEHS-------FEYRAPGSILVCESEEEMEAAQKWVNRQKEAGLP 53
Query: 202 AEYLSSSDLLQAEP----ELMVGED--SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
L D+ + P +L+ G + + + PY +LA + + + + A
Sbjct: 54 FRMLDRQDIREESPFFADDLLGGLECATDSTVNPY------LLAFSLLAEAEKLGAKS-- 105
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H V + R+ + V+T+ T ++ K IV AAG W+ + L L
Sbjct: 106 ---FKHTEVKEMRRAIDGSFI--VETTNGT-FTAKQIVNAAGVWAPKIGEML------DL 153
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHH---DLTLHPGQVNHGQILSISMTAT 372
IP++PRKGH++V + + ME GY+ + +G L T +
Sbjct: 154 SIPIEPRKGHIIVASRQQYVG-SRKVMEFGYLISKFGGKRKVDALTEKYGVALVFEPTES 212
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
N ++GSSR+F GF+T + +I I RA FYPK+ D+ + + GLR
Sbjct: 213 Q----NFLIGSSREFVGFHTRINNEVIKCIANRAIRFYPKMADMMVI------RSYAGLR 262
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
P+ D P+I V + ++A GHEG G+SLA T +++ +++
Sbjct: 263 PWTEDHLPIISRVEHIPNYYIAAGHEGDGISLAAVTGKVIEELL 306
>gi|229080025|ref|ZP_04212555.1| Sarcosine oxidase, beta subunit [Bacillus cereus Rock4-2]
gi|228703283|gb|EEL55739.1| Sarcosine oxidase, beta subunit [Bacillus cereus Rock4-2]
Length = 342
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 163/356 (45%), Gaps = 50/356 (14%)
Query: 131 VHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKE 190
+ + PG + ++L S KL L++ L ++ GS+L+ + EE+ ++
Sbjct: 3 IDKDPGFD-SQMSLVSQKLVTDLSEELE-------HSFEYRAPGSILVCESDEEMEAAQQ 54
Query: 191 RVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKG 246
V + EAGL L D+ + P +L+ G + DS ++ L +
Sbjct: 55 WVNRQKEAGLPFRMLDRKDIREESPFFADDLLGGLECAT-----DSTVNPYLLAFSLLSE 109
Query: 247 NRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMH 305
+ F +K F V + + ++ + VE + N ++ + +V AAG W+ +
Sbjct: 110 AQKFGAKA----FKQTKVKSMEIETDGSFVVE----TTNGTFTAQQVVNAAGVWAPKIGQ 161
Query: 306 DLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV-----GHHDLTLHPGQVN 360
L ++IP++PRKGH++V + ME GY+ G + +
Sbjct: 162 ML------NINIPIEPRKGHIIVASRQQHVGCRKV-MEFGYLISKFGGKRKVDALTEK-- 212
Query: 361 HGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLAD 420
+G L T + N ++GSSR+F GF+T + +I I RA FYPK+ D+ +
Sbjct: 213 YGVALVFEPTESQ----NFLIGSSREFVGFHTRINNEVIKCIANRAIRFYPKMADMMVI- 267
Query: 421 FISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
+ GLRP+ D P+I V + F+A GHEG G+SLA T +++ +++
Sbjct: 268 -----RSYAGLRPWTEDHLPIISRVEHIPNYFIAAGHEGDGISLAAVTGKVIEELL 318
>gi|398852370|ref|ZP_10609029.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM80]
gi|398244221|gb|EJN29783.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM80]
Length = 419
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 185/446 (41%), Gaps = 89/446 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG + A QL +L VA++D P AT A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASCAYQLSKRKNLKVALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRD-QGLDPL 165
+D AL+SN L+ L L++ G+D
Sbjct: 64 IFFRMMSANRKRETQGAAVAVDASTPHILPESFFDFALQSNALYPALHRELKENHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L +AEP V ++R
Sbjct: 122 --FKFEKTGLKFVIYDDEDRLYAEHIVGCIPHLADQVRWLDQAQLREAEPS--VSHEARG 177
Query: 226 A--FLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS 282
A FL D Q+ LA AY+E ++ + + VT +L + V VQT+
Sbjct: 178 ALEFL-CDHQVSPFRLADAYMEGARQNGVDI-----YVNTNVTGVLHHGT--RVTGVQTA 229
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
+ ++ K ++ A+G W+ L E + IPVKP KG +L+ E + +
Sbjct: 230 EEGVFHCKTLINASGAWAADL-----SEWATGIRIPVKPVKGQILLTERMPKILNGCLTT 284
Query: 343 EAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRI 402
YV D +G+IL +GS+ + GF+ I +
Sbjct: 285 SDCYVAQKD---------NGEIL---------------IGSTTEDKGFDVTTTYPEIAGL 320
Query: 403 WKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGL 462
+ A P+L+D+ L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 321 VQGAVRCLPELKDVNL------KRTWAGLRPGSPDELPILGPMRGVEGYLNACGHFRTGI 374
Query: 463 SLALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V PL +D PF
Sbjct: 375 LTSAITGVLLDKLVNDEPLPLDITPF 400
>gi|407362231|ref|ZP_11108763.1| hydrogen cyanide synthase HcnC [Pseudomonas mandelii JR-1]
Length = 416
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 179/444 (40%), Gaps = 85/444 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG + A QL ++ VA++D P AT A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASCAYQLSKRKNIKVALIDCKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDPL 165
+D AL+SN ++ L L+D+ G+D
Sbjct: 64 IFFRMMSANRKREAQGSAVVVDSSTPHILPQSFFDFALQSNAMYPALHRELKDRHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L AEP +
Sbjct: 122 --FKFEKTGLKFVIYDEEDRLYAEHIVACIPHLADQVRWLDQAALRAAEPSVSHEASGAL 179
Query: 226 AFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKN 284
FL D Q+ LA AY E A + +++ VT +L S V VQT++
Sbjct: 180 EFL-CDHQVSPFRLADAYTEG-----ARQNGVDLYFNTNVTGVLHQGS--RVSGVQTAEA 231
Query: 285 TLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEA 344
++ ++ AAG W+ L E + IPVKP KG +L+ E + +
Sbjct: 232 GVFHCSTLINAAGAWAADL-----SEQATGIRIPVKPVKGQILLTERLPKILNGCLTTSD 286
Query: 345 GYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWK 404
YV D +G+IL +GS+ + GF+ I + +
Sbjct: 287 CYVAQKD---------NGEIL---------------IGSTTEDKGFDVSTTYPEIAGLVQ 322
Query: 405 RAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
A P+L D+ L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 323 GAVRCLPELADVNL------KRTWAGLRPGSPDELPILGPMKGVEGYLNACGHFRTGILT 376
Query: 465 ALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V PL +D PF
Sbjct: 377 SAITGVLLDKLVNNEPLPLDITPF 400
>gi|169825718|ref|YP_001695876.1| glycine oxidase [Lysinibacillus sphaericus C3-41]
gi|168990206|gb|ACA37746.1| Glycine oxidase [Lysinibacillus sphaericus C3-41]
Length = 401
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 168/375 (44%), Gaps = 38/375 (10%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L + V++K SG + G I + + PG + ++L S +L L L D +
Sbjct: 37 LDITVLEKNELASGTSSRCDGNILAIDKDPGFDS-QMSLVSQRLVHELNREL-DMSFE-- 92
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
++ GS+L+ + E+ ++ V + EAGL L DL + E + +
Sbjct: 93 ----YRNPGSILVCESELEMEAAQQWVNRQQEAGLDFTMLDREDL-RNESKYFADDLYGG 147
Query: 226 AFLPYDSQLDA-MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKN 284
DS ++ ML + + A ++ E + + +++T++
Sbjct: 148 LECKTDSTVNPYMLTFSMFHSAEKLGAKIKKHTEVKN-------IKKQPDDTFSLETNEG 200
Query: 285 TLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEA 344
+ + K ++ A G W+ + L +DIP+KPRKGH+LV + L ME
Sbjct: 201 WITANK-VINACGIWAPFIGQML------SVDIPIKPRKGHILVASRQEPVGLRKV-MEF 252
Query: 345 GYVGHH---DLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDR 401
GY+ + + +G L T N ++GSSR+F GF+T+V +
Sbjct: 253 GYLISKFGGERKVDADIEKYGVALVFEPTEAQ----NFLIGSSREFVGFDTKVNHDVAKM 308
Query: 402 IWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLG 461
I +RA FYPK+ D+ + + GLRP+ D P+I V + ++A GHEG G
Sbjct: 309 IARRAVRFYPKIADMSII------RTYAGLRPWTEDHLPIICEVEEVPGFYIAAGHEGDG 362
Query: 462 LSLALGTAELVADMV 476
+SLA T +L+ +++
Sbjct: 363 ISLAAVTGKLIQELL 377
>gi|283786213|ref|YP_003366078.1| hypothetical protein ROD_25431 [Citrobacter rodentium ICC168]
gi|282949667|emb|CBG89286.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
Length = 367
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 155/363 (42%), Gaps = 58/363 (15%)
Query: 118 SGATGAGQGYIWMVHRTPGS---EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTG 174
+GAT AG G++ + P W LA W+ L + + W+ G
Sbjct: 37 AGATAAGMGHLVCMDDDPAELTLSAWSLAR-----WRALTPRMPES-------CAWRGCG 84
Query: 175 SLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQL 234
+L + TP+EL + +E+++++ + + +E + L EP L G + ++P D
Sbjct: 85 TLWLAETPQELALAEEKMRRMAQYQVASEMQTREQLAAREPLLTAGL-AGGLWVPGDG-- 141
Query: 235 DAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVV 294
+ Y R F +T L S + + V +AIV+
Sbjct: 142 -----IVYAPNVARWFIDDAG--------LTHLRDSARSVDAPYVTLHSGKRLRARAIVI 188
Query: 295 AAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTL 354
A+G + +L+ + ++ +KG L + + + L L+H +E GY
Sbjct: 189 ASGLGANALLGEPW----------LRAKKGQLAITDRYGPL-LSHQLVELGY-------- 229
Query: 355 HPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLR 414
G H S++ G L++GSSRQF + E++ ++ ++ RA F P L
Sbjct: 230 --GASAHAGGTSVAFNIQPRPTGQLLIGSSRQFDNTDREIDLPLLAQMLARARHFLPALE 287
Query: 415 DLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVAD 474
L + S G R DG P+IGP P ++LA GHEGLG++ A TAEL+
Sbjct: 288 TLNIIRCWS------GFRVASADGNPLIGPHPTRPGIWLALGHEGLGVTTAPATAELLCA 341
Query: 475 MVL 477
+L
Sbjct: 342 QIL 344
>gi|77459736|ref|YP_349243.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Pf0-1]
gi|77383739|gb|ABA75252.1| hydrogen cyanide synthase HcnC [Pseudomonas fluorescens Pf0-1]
Length = 419
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 181/445 (40%), Gaps = 87/445 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG +IA QL L VA++D P AT A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASIAYQLSKRKGLKVALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRD-QGLDPL 165
+D AL+SN L+ L LRD G+D
Sbjct: 64 IFFRMMSASRKRETQGAAVAVDASTPHILPPSFFDFALQSNALYPALHRELRDNHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L ++EP V ++R
Sbjct: 122 --FKFEKTGLKFVIYDDEDRLYAEHIVGCIPHLADQVRWLDQAALRESEPS--VSHEARG 177
Query: 226 AF-LPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
A D Q+ LA AY E ++ + + +T +L + V VQT++
Sbjct: 178 ALEFLCDHQVSPFRLADAYTEGARQNGVDM-----YVNTNITGVLHHGT--RVTGVQTAE 230
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
++ K ++ AAG W+ L E + IPVKP KG +L+ E + +
Sbjct: 231 AGVFHCKTLINAAGAWAAD-----LSEWATGIRIPVKPVKGQILLTERLPKILNGCLTTS 285
Query: 344 AGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIW 403
Y+ D +G+IL +GS+ + GF+ I +
Sbjct: 286 DCYMAQKD---------NGEIL---------------IGSTTEDKGFDVTTTWPEIAGLV 321
Query: 404 KRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLS 463
+ A P+L D+ L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 322 QGAVRCLPELADINL------KRTWAGLRPGSPDELPILGPMAGVEGYLNACGHFRTGVL 375
Query: 464 LALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V PL +D PF
Sbjct: 376 TSAITGVLLDKLVNDEPLSLDITPF 400
>gi|398787421|ref|ZP_10549855.1| oxidoreductase [Streptomyces auratus AGR0001]
gi|396992962|gb|EJJ04049.1| oxidoreductase [Streptomyces auratus AGR0001]
Length = 376
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 181/410 (44%), Gaps = 52/410 (12%)
Query: 85 IIIGAGIIGLTIARQLLVG-SDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLA 143
+I+GAG++G A G + LSVAVVD+ G TGAG+G + + + PG E+ LA
Sbjct: 1 MIVGAGVVGAACA--YYAGRAGLSVAVVDRGPVAGGTTGAGEGNLLVSDKEPGPELA-LA 57
Query: 144 LRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAE 203
L S +LW+ LA L + I ++ G L++ + L+ EAG+ +
Sbjct: 58 LLSTRLWRELAAELPPE-------IEYETKGGLVVAADESGMTSLRAFCAAQGEAGVESR 110
Query: 204 YLSSSDLLQAEPELMVGEDSRAAFLPYDSQLD--AMLAVAYIEKGNR-HFASKGRYAEFY 260
L L EP L G + P D+Q+ A G R H ++
Sbjct: 111 DLPGDRLRDVEPHLAPGL-AGGVLYPQDAQVQPALAAAHLLRASGARLHLGAE------- 162
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
VT +LR G V V+T + L + A+V A G W+G L + + +PV
Sbjct: 163 ---VTAVLRGPG-GAVRGVRTPRGDLLAP-AVVNATGTWAGRLA------SLAGVTVPVL 211
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
PR+G++LV E + A YV + L S G ++
Sbjct: 212 PRRGYVLVTEPLPRVVCRKV-YAADYVAD--------VASGSAALQTSAVVEGTPAGPVL 262
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI--GLRPYMPDG 438
+G+SR+ GF+ + ++ R+ +AA +P L + R +R G RPY+PD
Sbjct: 263 IGASRERVGFDRTLSAGVLRRLAAQAAALFPVLAGV--------RVIRTYQGFRPYLPDH 314
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P IGP P + A GHEG G+ LA T L+A + +D+ PF
Sbjct: 315 LPAIGPDPRAPGLLHACGHEGAGIGLAPATGRLIAAALTDTVGPLDARPF 364
>gi|229190933|ref|ZP_04317924.1| Sarcosine oxidase, beta subunit [Bacillus cereus ATCC 10876]
gi|228592601|gb|EEK50429.1| Sarcosine oxidase, beta subunit [Bacillus cereus ATCC 10876]
Length = 330
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 158/345 (45%), Gaps = 49/345 (14%)
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
++L S KL L++ L ++ GS+L+ + EE+ ++ V + EAGL
Sbjct: 1 MSLVSQKLVTDLSEELEHS-------FEYRAPGSILVCESDEEMEAAQQWVNRQKEAGLP 53
Query: 202 AEYLSSSDLLQAEP----ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
L D+ + P +L+ G + DS ++ L + + F +K
Sbjct: 54 FRMLDRQDIREESPFFADDLLGGLECAT-----DSTVNPYLLAFSLLSEAQKFGAKA--- 105
Query: 258 EFYHDPVTCL-LRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
F V + + ++ + VE + N ++ + +V AAG W+ + L ++
Sbjct: 106 -FKQTEVKSMEIETDGSFVVE----TTNGTFTAQQVVNAAGVWAPKIGQML------NIN 154
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYV-----GHHDLTLHPGQVNHGQILSISMTA 371
IP++PRKGH++V + ME GY+ G + + +G L T
Sbjct: 155 IPIEPRKGHIIVASRQQHVGCRKV-MEFGYLISKFGGKRKVDALTEK--YGVALVFEPTE 211
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
+ N ++GSSR+F GF+T + +I I RA FYPK+ D+ + + GL
Sbjct: 212 SQ----NFLIGSSREFVGFHTRINNEVIKCIANRAIRFYPKMADMMVI------RSYAGL 261
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
RP+ D P+I V + F+A GHEG G+SLA T +++ +++
Sbjct: 262 RPWTEDHLPIISRVEHIPNYFIAAGHEGDGISLAAVTGKVIEELL 306
>gi|424922647|ref|ZP_18346008.1| Glycine/D-amino acid oxidase (deaminating) [Pseudomonas fluorescens
R124]
gi|404303807|gb|EJZ57769.1| Glycine/D-amino acid oxidase (deaminating) [Pseudomonas fluorescens
R124]
Length = 419
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 181/445 (40%), Gaps = 87/445 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DVII G G+IG + A QL L VA++D P AT A G +W + + G
Sbjct: 5 YDVIIAGGGVIGASCAYQLSKREGLKVALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDPL 165
+D AL+SN L+ L L+D+ G+D
Sbjct: 64 IFFRMMSANRKRETQGAAVAVDASTPHILPESFFDFALQSNALYPALHRELKDKHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L +AEP V ++R
Sbjct: 122 --FKFEKTGLKFVIYDDEDRLYAEHIVSCIPHLADQVRWLDQAALREAEPS--VSHEARG 177
Query: 226 AF-LPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
A D Q+ LA AY+E ++ + + VT +L S V VQT++
Sbjct: 178 ALEFLCDHQVSPFRLADAYMEGARQNGVDI-----YVNTNVTGVLHHGS--RVTGVQTAE 230
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
++ K ++ A G W+ L E + IPVKP KG +L+ E + +
Sbjct: 231 EGVFHCKTLINAGGAWAADL-----SEWATGVRIPVKPVKGQILLTERMPKILNGCLTTS 285
Query: 344 AGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIW 403
YV D +G+IL +GS+ + GF+ I +
Sbjct: 286 DCYVAQKD---------NGEIL---------------IGSTTEDKGFDVTTTYPEIAGLV 321
Query: 404 KRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLS 463
+ A P+L+D+ L ++ GLRP PD P+IGP+ G+ A GH G+
Sbjct: 322 QGAVRCLPELKDVNL------KRTWAGLRPGSPDELPIIGPMRGVEGYLNACGHFRTGIL 375
Query: 464 LALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V L +D PF
Sbjct: 376 TSAITGVLLDKLVNHEALPLDITPF 400
>gi|425898999|ref|ZP_18875590.1| hydrogen cyanide synthase HcnC [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397889361|gb|EJL05843.1| hydrogen cyanide synthase HcnC [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 418
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 181/444 (40%), Gaps = 85/444 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG + A QL +L VA++D P AT A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASCAYQLSKRKNLRVALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDPL 165
+D AL+SN L+ L + LR++ G+D
Sbjct: 64 IFFRMMSARNKRQAQGSAVLVDSSTPHILPQSFFDFALQSNGLYPQLHEELRERHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L QAEP +
Sbjct: 122 --FKFERTGLKFVIYDDEDRLYAEHIVACIPHLAHQVRWLDQAALRQAEPNVSHAAQGAL 179
Query: 226 AFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKN 284
FL D Q++ LA AY E ++ +++ VT +L S + VQT++
Sbjct: 180 EFL-CDHQVNPFRLADAYTEGARQNGVDM-----YFNTNVTGVLHQGS--RISGVQTAEA 231
Query: 285 TLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEA 344
L+ ++ AAG W+ L L+ T IPVKP KG +L+ E L +
Sbjct: 232 GLFHCDTLINAAGAWAAELS---LQATGA--SIPVKPVKGQILLTERMPQLLNGCLTTSD 286
Query: 345 GYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWK 404
Y+ D +G+IL +GS+ + GF+ I + +
Sbjct: 287 CYMAQKD---------NGEIL---------------IGSTTEDKGFDISTTYREIQGLVQ 322
Query: 405 RAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
A P+L + L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 323 GAVRCVPQLEQVNL------KRCWAGLRPGSPDELPILGPMCGVEGYLNACGHFRTGILT 376
Query: 465 ALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V L +D PF
Sbjct: 377 SAITGVLLDRLVNEEALPLDITPF 400
>gi|398975575|ref|ZP_10685684.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM25]
gi|398140252|gb|EJM29224.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM25]
Length = 419
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 183/446 (41%), Gaps = 89/446 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG +IA QL L VA++D P AT A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASIAYQLSKRKGLKVALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRD-QGLDPL 165
+D AL+SN L+ L LRD G+D
Sbjct: 64 IFFRMMSANRKRETQGAAVAVDSSTPHILPPSFFDFALQSNALYPALHRELRDNHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L ++EP V ++R
Sbjct: 122 --FKFEKTGLKFVIYDDEDRLYAEHIVGCIPHLADQVRWLDQAALRESEPS--VSHEARG 177
Query: 226 A--FLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS 282
A FL D Q+ LA AY E ++ + + +T +L + V VQT+
Sbjct: 178 ALEFL-CDHQVSPFRLADAYTEGARQNGVDM-----YVNTNITGVLHHGA--RVTGVQTA 229
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
+ ++ K ++ AAG W+ L E + IPVKP KG +L+ E + +
Sbjct: 230 EAGVFHCKTLINAAGAWAAD-----LSEWATGIRIPVKPVKGQILLTERLPKILNGCLTT 284
Query: 343 EAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRI 402
Y+ D +G+IL +GS+ + GF+ I +
Sbjct: 285 SDCYMAQKD---------NGEIL---------------IGSTTEDKGFDVTTTWPEIAGL 320
Query: 403 WKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGL 462
+ A P+L D+ L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 321 VQGAVRCLPELADINL------KRTWAGLRPGSPDELPILGPMAGVEGYLNACGHFRTGV 374
Query: 463 SLALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V PL +D PF
Sbjct: 375 LTSAITGVLLDKLVNDEPLPLDITPF 400
>gi|320161069|ref|YP_004174293.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
gi|319994922|dbj|BAJ63693.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
Length = 387
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 170/411 (41%), Gaps = 59/411 (14%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPC-SGATGAGQGYIWMVHRTPGSEIW 140
+DVI+IGAG +G A L + L V V+D + G+ G I H P
Sbjct: 8 YDVIVIGAGSVGTPTALSL-AKAGLKVLVLDALPSAGQGSNKHAIGGIRATHSDPAKI-- 64
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
L LRS +++ + D I W + G + + +E LKE +++ GL
Sbjct: 65 RLCLRSIEIFSTWKEIYGDD-------IEWHKGGYVFVAYREQEERTLKELLRKQQSYGL 117
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF- 259
+L ++DL++ P L + P D +L++ K R + AEF
Sbjct: 118 NISWLDANDLVKLIPYLNREGLIGGTYSPDDGSASPLLSIHAFYKHARQYG-----AEFH 172
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
+++PV ++ G+++ V+T+K T Y+ K +V AAG W+ SL + + L IPV
Sbjct: 173 FNEPVMEMIVRG--GKIQGVKTTKGT-YNAKVVVNAAGAWAKSLGN------LVGLTIPV 223
Query: 320 KPRKGHLLVLENFNSL------KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
+P + E L + A A + + T GQIL
Sbjct: 224 QPDSHEAAITEPVQRLFDPMVVDIRPAKGSANFYFYQHKT--------GQIL-------- 267
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
+ S GF+T + + + KR E P L+ I R+ GL P
Sbjct: 268 -----FCITPSPNIWGFDTRETSSFLPMVSKRIVEVMPSLQH------IRVRRTWRGLYP 316
Query: 434 YMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVD 484
PDG P++G + LA G G G L G EL+ MV+ +PL D
Sbjct: 317 MTPDGFPIVGWSKEVEGFLLAVGMCGQGYMLGPGLGELLTRMVIQSPLPQD 367
>gi|398966567|ref|ZP_10681571.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM30]
gi|398145954|gb|EJM34725.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM30]
Length = 419
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 182/445 (40%), Gaps = 87/445 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG + A QL L VA++D P AT A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASCAYQLSKRQGLKVALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDPL 165
+ +D AL+SN L+ L L D+ G+D
Sbjct: 64 IFFRMMSANRKRETQGAAVAVDASTPHILPASFFDFALQSNALYPQLHRELIDKHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L +AEP V ++R
Sbjct: 122 --FKFEKTGLKFVIYDDEDRLYAEHIVSCIPHLADQVRWLDQAALREAEPS--VSHEARG 177
Query: 226 AF-LPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
A D Q+ LA AY+E ++ F + VT +L + V VQT++
Sbjct: 178 ALEFLCDHQVSPFRLADAYMEGARQNGVDI-----FVNTNVTGVLHHGN--RVTGVQTAE 230
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
++ K ++ AAG W+ L E + IPVKP KG +L+ E + +
Sbjct: 231 EGVFHCKTLINAAGAWAADL-----SEWATGIRIPVKPVKGQILLTERMPKILNGCLTTS 285
Query: 344 AGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIW 403
YV D +G+IL +GS+ + GF+ I +
Sbjct: 286 DCYVAQKD---------NGEIL---------------IGSTTEDKGFDVTTTYPEIAGLV 321
Query: 404 KRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLS 463
+ A P+L+D+ L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 322 QGAVRCLPELKDVNL------KRTWAGLRPGSPDELPILGPMRGVEGYLNACGHFRTGIL 375
Query: 464 LALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V L +D PF
Sbjct: 376 TSAITGVLLDKLVNQEALPLDITPF 400
>gi|304309985|ref|YP_003809583.1| D-amino acid oxidase [gamma proteobacterium HdN1]
gi|301795718|emb|CBL43917.1| Putative D-amino acid oxidase [gamma proteobacterium HdN1]
Length = 364
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 179/422 (42%), Gaps = 87/422 (20%)
Query: 85 IIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSEI 139
+++G G+IG+ AR L V + SV + D+ S A+ AG G Y W R P + +
Sbjct: 4 LVVGGGVIGMMTARNL-VQAGCSVRLFDQAAAGSEASWAGGGIMSPLYPW---RYP-APV 58
Query: 140 WDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVML-----KERVK 193
LA S + + LA L ++ G+DP + G L++G E + +++
Sbjct: 59 NQLASWSQQHYPSLAAKLVEETGIDP----ELRTYGMLMLGGNDSESAIQWASANNAQIQ 114
Query: 194 QLCEAGLRA---EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHF 250
+ E LR+ YL S+ PE+ R + L A+ A E
Sbjct: 115 EYDEQALRSLLPPYLDVSEQALWMPEIRGIRSPRL----LKALLVALQASPLFE------ 164
Query: 251 ASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRE 310
H T L + G V+ V TSK Y AI++ AG WS +L+
Sbjct: 165 ---------LHTNETVLRLEETDGRVQRVITSKEC-YCADAIIICAGAWSAALLEPF--- 211
Query: 311 TEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMT 370
+P+KP +G +L ++ AG++ H I M
Sbjct: 212 ---GYRLPIKPVRGQMLAIQA-----------PAGWLPH-----------------ILMK 240
Query: 371 ATTDVI----GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRK 426
+I G ++ GS+ +F GFN + +T + +RA P L++ + +
Sbjct: 241 NGAYLIPREDGLILAGSTLEFVGFNKALTETAKSFLLQRAYGMLPALKEFPVVHHWA--- 297
Query: 427 VRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSA 486
GLRP P+G P IGP+ GLS V++ GH GL +A + L+AD+VL +D+
Sbjct: 298 ---GLRPSSPNGIPYIGPIQGLSGVYINAGHYRNGLVMAPASGRLIADIVLGRSPMMDAT 354
Query: 487 PF 488
PF
Sbjct: 355 PF 356
>gi|387813573|ref|YP_005429055.1| glycine/D-amino acid oxidase [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381338585|emb|CCG94632.1| Glycine/D-amino acid oxidases (Deaminating) [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 410
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 182/418 (43%), Gaps = 50/418 (11%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEI 139
H DV+IIG GI+G IAR L LSV VV++ T + + P S +
Sbjct: 5 HHPDVVIIGGGILGCAIARYLSRLPGLSVTVVERHGLGEQTTSYAAALLTRIR--PHSAL 62
Query: 140 WDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
LA+ + + ++ + G + + + GSL + P+ L L+E ++ EAG
Sbjct: 63 TALAMETFR-------AIEEMGQSSGEPLPLRSVGSLQVSARPDGLRQLEETARRAKEAG 115
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAE 258
+ A ++ D +Q P L + D+ A +LP D +D L +AY +G R R
Sbjct: 116 VTANAIAVQDAMQLAPWLDLTPDTAALWLPDDGYIDPYSLCMAYAAEGRR------RGVR 169
Query: 259 F-YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
F V+ LL G V V+ + S +V AAG WS +L ++ + +
Sbjct: 170 FRLKQSVSDLLMQG--GRVTGVRLGHGEVLSAGLVVDAAGPWSTALAR------QVGVHL 221
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHP-----GQVNHGQILSISMTAT 372
+ P + H + ++ +A H +T+ P + + G +L A
Sbjct: 222 GMAPVRSHYWI-----------SAPDARIPAHGPMTILPDSGAYARPDVGGLLFGLREAQ 270
Query: 373 TDVIGNLVLGSSRQFAGFNTEV--EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIG 430
V VL S Q F+T+ E + D ++ P L +L LA ++SN
Sbjct: 271 AVVADPAVLPESLQGFRFDTDPAGEHALEDGYASLRSQL-PLLDELRLAHYVSN------ 323
Query: 431 LRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+ Y PDG ++GP+PG+ ATG G G+ ++ G +++++ P V S PF
Sbjct: 324 VSSYTPDGFYLLGPMPGIQGFIAATGCSGAGIGMSGGIGRFISELIAGQPTFVTSEPF 381
>gi|255709704|gb|ACU30743.1| hydrogen cyanide synthase [Pseudomonas sp. In5]
Length = 419
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 180/445 (40%), Gaps = 87/445 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG + A QL +L VA++D P AT A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASCAYQLSKRKNLKVALIDFKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRD-QGLDPL 165
+D AL+SN ++ L L+D G+D
Sbjct: 64 IFFRMMSANRKREAHGSAVVVDSSTPHILPQSFFDFALQSNAMYPALHKELQDNHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L +AEP V ++R
Sbjct: 122 --FKFEKTGLKFVIYDDEDRLYAEHIVACIPHLADQVRWLDQAALREAEP--AVSHEARG 177
Query: 226 AF-LPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
A D Q+ LA AY E A + +++ VT +L S V VQT++
Sbjct: 178 ALEFLCDHQVSPFRLADAYTEG-----ARQNGVDLYFNANVTGVLHHGS--RVTGVQTAE 230
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
++ ++ AAG W+ L E + IPV P KG +L+ E + +
Sbjct: 231 AGVFHCDTLINAAGAWAADL-----SEQATGIRIPVNPVKGQILLTERMPKILRGCLTTS 285
Query: 344 AGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIW 403
YV D +G+IL +GS+ + GF+ I +
Sbjct: 286 DCYVAQKD---------NGEIL---------------IGSTTEDKGFDVTTTYPEIAGLV 321
Query: 404 KRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLS 463
+ A P+L D+ L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 322 QGAVRCIPELADVNL------KRTWAGLRPGSPDELPILGPMKGVEGYLNACGHFRTGIL 375
Query: 464 LALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V PL +D PF
Sbjct: 376 TSAITGVLLDKLVNHEPLPLDITPF 400
>gi|399009846|ref|ZP_10712256.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM17]
gi|398109752|gb|EJL99669.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM17]
Length = 418
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 181/444 (40%), Gaps = 85/444 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG + A QL +L VA++D P AT A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASCAYQLSKRKNLRVALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDPL 165
+D AL+SN L+ L + LR++ G+D
Sbjct: 64 IFFRMMSARNKRQAQGSAVLVDSSTPHILPQSFFDFALQSNGLYPQLHEELRERHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L QAEP +
Sbjct: 122 --FKFERTGLKFVIYDDEDRLYAEHIVACIPHLSHQVRWLDQAALRQAEPNVSHHAQGAL 179
Query: 226 AFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKN 284
FL D Q++ LA AY E A + +++ VT +L S + VQT++
Sbjct: 180 EFL-CDHQVNPFRLADAYTEG-----ARQNGVDMYFNTNVTGVLHQGS--RISGVQTAEA 231
Query: 285 TLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEA 344
L+ ++ AAG W+ L L+ T IPVKP KG +L+ E L +
Sbjct: 232 GLFHCDTLINAAGAWAAELS---LQATGA--SIPVKPVKGQILLTERMPQLLNGCLTTSD 286
Query: 345 GYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWK 404
Y+ D +G+IL +GS+ + GF+ I + +
Sbjct: 287 CYMAQKD---------NGEIL---------------IGSTTEDKGFDISTTYREIQGLVQ 322
Query: 405 RAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
A P+L + L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 323 GAVRCVPQLEQVNL------KRCWAGLRPGSPDELPILGPMCGVEGYLNACGHFRTGILT 376
Query: 465 ALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V L +D PF
Sbjct: 377 SAITGVLLDRLVNEEALPLDITPF 400
>gi|395010517|ref|ZP_10393889.1| glycine/D-amino acid oxidase, deaminating [Acidovorax sp. CF316]
gi|394311404|gb|EJE48755.1| glycine/D-amino acid oxidase, deaminating [Acidovorax sp. CF316]
Length = 372
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 180/410 (43%), Gaps = 55/410 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI+IGAG++G A L + LSV V+D GAT AG G++ ++ +L
Sbjct: 5 DVIVIGAGMVGAACAHLLAH-AGLSVRVLDARR--GGATQAGMGHLVVMDDNAA----EL 57
Query: 143 ALRSNKL--WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL L W + L + G+L I EE+ + + L G+
Sbjct: 58 ALSQASLEQWHAWGPRMNAD----LPGCAYSNCGTLWIAANAEEMAGAEAKAAGLRAHGI 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
E L ++ L + EP L G R A + DS + A A ++ A R
Sbjct: 114 ACELLDAAALARLEPALRPG--LRGALKVGGDSVVYAPNAAQWL------LAHAARPITV 165
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
H V + E V + + A+++AAG + T++ +P+
Sbjct: 166 EHAQVERI-------EGRRVHLADGGVREGGAVLLAAG----------IHATDLCPGLPI 208
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+P+KGHL + + + + H +E GY+ + + S++ G L
Sbjct: 209 RPKKGHLAITDRYPG-TVRHQLVELGYITN---------AHQSDGTSVAFNLQPRPTGQL 258
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++GSSRQF + ++ ++ R+ +RA E+ P L +L + + G R PDG
Sbjct: 259 LIGSSRQFDTTDPAIDNAVLARMLQRALEYVPGLAEL------NAIRTWTGFRAATPDGL 312
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+IG P ++LA GHEGLG++ A TA+L+A + ++ AP++
Sbjct: 313 PIIGRHPQHRDLWLAVGHEGLGVTTAPATAQLLAAQITGATPPLEPAPYS 362
>gi|409422388|ref|ZP_11259489.1| hydrogen cyanide synthase HcnC [Pseudomonas sp. HYS]
Length = 418
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 181/446 (40%), Gaps = 87/446 (19%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG---- 136
T+DV+I G G+IG + A QL +L +A++D P AT A G +W + + G
Sbjct: 4 TYDVVIAGGGVIGASCAYQLSKRKNLKIALIDAKRP-GNATRASAGGLWAIGESVGLGCG 62
Query: 137 -------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDP 164
+D AL+SN L+ L L D+ G+D
Sbjct: 63 VIFFRMMSAKHKREAHGAAVAVDSSTPHILPQSFFDFALQSNALYPQLHRELIDRHGMD- 121
Query: 165 LQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSR 224
+++TG + E+ + + V Q+ + +L L QAEP +
Sbjct: 122 ---FKFERTGLKYVIYDDEDRLYAEHIVAQIPHLADQVRWLDREALRQAEPAVSHQAHGA 178
Query: 225 AAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDP-VTCLLRSNSTGEVEAVQTS 282
FL D Q+ LA AY+E A++ + +H+ +T +L S V VQT+
Sbjct: 179 LEFL-CDHQVSPFRLADAYME------AARQNGVDLFHNTNITGVLHQGS--RVSGVQTA 229
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
+ + ++ AAG W+ L E L IPVKP KG +++ E L +
Sbjct: 230 EEGTFHCDTLINAAGAWAADL-----SEWATGLRIPVKPVKGQIILTERMPKLLQGCLTT 284
Query: 343 EAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRI 402
Y+ D +G+IL +GS+ + GF+ I+ +
Sbjct: 285 SDCYMAQKD---------NGEIL---------------IGSTTEDKGFDVSNTFPEINGL 320
Query: 403 WKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGL 462
+ A P+L + L ++ GLRP PD P++GPV +S A GH G+
Sbjct: 321 VQGAVRCVPELAQINL------KRTWAGLRPGSPDELPILGPVTEVSGYLNACGHFRTGI 374
Query: 463 SLALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ ++ L +D PF
Sbjct: 375 LTSAITGVLIDKVLHQETLPLDITPF 400
>gi|347752710|ref|YP_004860275.1| FAD dependent oxidoreductase [Bacillus coagulans 36D1]
gi|347585228|gb|AEP01495.1| FAD dependent oxidoreductase [Bacillus coagulans 36D1]
Length = 364
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 179/402 (44%), Gaps = 67/402 (16%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
++VIIIGAG++G IA L ++ V+DK P SG +GA Q ++W+ + P + +
Sbjct: 7 YEVIIIGAGVVGNGIAYHLSDKKQKNILVIDKGFPLSGTSGATQAWVWVHGKKPDTYAY- 65
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
S +L+ L + D I + +TG + + EE+ ++ V+ AG+
Sbjct: 66 FTKCSAELYPELERKIGD--------IEYARTGGIEPFFSVEEMKEAEKMVQSQSNAGIP 117
Query: 202 AEYLSSSDLLQAEPEL---MVGEDSRAAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYA 257
E LS ++L+ EP +VG A + P D ++ L YI+ H + Y
Sbjct: 118 VELLSREEVLKKEPYFSQNVVG----ATYSPVDGNVNPFKLLEKYIKANRAHDVTFSFYN 173
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
E VT + G+ V T K ++K +V+A G W+ L L + +
Sbjct: 174 E-----VTGI--DKKAGKF-VVHTQKGKFTAEK-LVLAGGLWTKKLGAFL------NVSV 218
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
P++ +G ++V E HH + Q+ G +L
Sbjct: 219 PIEKVRGQIIVTEPLKPFI------------HHTIGGMMRQMQCGPVL------------ 254
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
+G S + AG++ II K ++YP DL A+ + + G+R D
Sbjct: 255 ---IGYSMEKAGYDRRSTLDIIQETAKFGIQYYP---DLAKANVV---RCFSGIRVIPED 305
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN 479
G P++G VP + ++++A H G+ LS +GT L++++++ +
Sbjct: 306 GIPILGKVPQVDQLYIAVTHSGVTLSPLIGT--LMSELIMKD 345
>gi|365093617|ref|ZP_09330681.1| hypothetical protein KYG_18164 [Acidovorax sp. NO-1]
gi|363414304|gb|EHL21455.1| hypothetical protein KYG_18164 [Acidovorax sp. NO-1]
Length = 371
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 187/416 (44%), Gaps = 64/416 (15%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T DV++IGAGI+G A L + LSV V+D + GAT AG G++ +V +E+
Sbjct: 3 TTDVLVIGAGIVGAACAHALAQ-AGLSVRVIDARL--GGATAAGMGHL-VVMDDNAAEL- 57
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
L+ S LW A + D G + G+L + EL ++ L G+
Sbjct: 58 ALSQTSLDLWHTWAPHM-DAG------CAFTPCGTLWLAANDAELQAAHDKRSTLQAHGI 110
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
+ L ++ L +AEP L G LA A +G+ R A++
Sbjct: 111 ACDMLDAAALARAEPALRPG-----------------LAGALKVQGDS-VVYAPRAAQWL 152
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLY-------SKKAIVVAAGCWSGSLMHDLLRETEI 313
D R + EA+ + NT+ S AIV+A+G + ++
Sbjct: 153 LDQAAAH-RHLVLEQAEAMHINGNTVTLRDGSQRSAGAIVLASG----------IHAPQL 201
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
+P++P+KGHL++ + + ++H +E GY+ +H S++
Sbjct: 202 CPGLPLRPKKGHLVITDRYPG-TVHHQLVELGYIT---------SAHHSDGTSVAFNVQP 251
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
G L++GSSR+F + V ++ R+ +RA ++ P L DL + + G R
Sbjct: 252 RPTGQLLIGSSREFDTTDPAVNNAVMARMLQRALDYLPGLADL------NAIRTWTGFRA 305
Query: 434 YMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
PD P+IG P ++LA GHEGLG++ A +A+L+A + +D +P+A
Sbjct: 306 ATPDSLPLIGAHPEHPHLWLAVGHEGLGVTTAPVSAQLLAAQITGGTPLIDPSPYA 361
>gi|408527970|emb|CCK26144.1| glycine oxidase ThiO [Streptomyces davawensis JCM 4913]
Length = 370
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 137/327 (41%), Gaps = 39/327 (11%)
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+ + ++ G +++ TP+ L L + AG+ AE + L EP L G
Sbjct: 67 ESVEYEAKGGVVVASTPDGLTALDRFADRQRAAGVVAETVVGEGLYDLEPHLAKGLPG-G 125
Query: 226 AFLPYDSQL--DAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
P D Q+ AV G R VT +LR+ G V V+T +
Sbjct: 126 VLYPQDCQVMPALAAAVLARASGARLLTGHT---------VTAVLRTPD-GTVRGVRTDR 175
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
L++ A+V A G W G L L T + PV PR+G +LV E F L ++H
Sbjct: 176 GDLHAP-AVVNATGTWGGDLA--ALAGTHL----PVLPRRGFVLVTEPFPRL-IHHKVYA 227
Query: 344 AGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIW 403
A YV + L S G +++G+SR+ GF+ +++ +
Sbjct: 228 ADYVAD--------VASDSAALQTSPVVEGTAAGPVLIGASRERVGFDRTFSLSVVRALA 279
Query: 404 KRAAEFYPKLRDLCLADFISNRKVR--IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLG 461
A +P L D+ R +R G RPY+PD P IGP P + + A GHEG G
Sbjct: 280 AGATRLFPVLADV--------RALRSYAGFRPYLPDHLPAIGPDPRVPGLHHACGHEGAG 331
Query: 462 LSLALGTAELVADMVLTNPLKVDSAPF 488
+ LA GTA L+ + + PF
Sbjct: 332 IGLATGTAHLITQALTGKSPDLSLTPF 358
>gi|187919273|ref|YP_001888304.1| FAD dependent oxidoreductase [Burkholderia phytofirmans PsJN]
gi|187717711|gb|ACD18934.1| FAD dependent oxidoreductase [Burkholderia phytofirmans PsJN]
Length = 375
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 178/409 (43%), Gaps = 48/409 (11%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T D +I+GAGI+G A +L + V V+D GAT AG G+I +++ +P +
Sbjct: 2 TADALIVGAGIVGAACAAELAA-LGMRVEVLDAQGIGGGATAAGMGHIVVMNDSPAE--F 58
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
L+ S LW LA LR + + + G+L + EE + G+
Sbjct: 59 ALSRYSRDLWLELAPQLRPRD-------AFARCGTLWVAADEEEWQAARATHAAFEAQGI 111
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
A+ L + L EP L +M IE + +A
Sbjct: 112 AAQLLDAPALRACEPALAA----------------SMAGGLRIEHDSIVYAPTVAEWLLT 155
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
P + V +V TL S + I A ++ + + ++V +P++
Sbjct: 156 RSPSAANIHLRLGAAVASVNAGGVTLTSGERIGAA-----HVIVANGVGAQQLVASLPLQ 210
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + L + H +E GY+ +H S++ A G L+
Sbjct: 211 PKKGHLLITDRYPGL-IRHQLLELGYI---------KSAHHAAGTSVAFNAQPRPTGQLL 260
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF + V+ ++ ++ +RAA + P L L + G R PDG P
Sbjct: 261 IGSSRQFDSTDPAVDLPVLAQMLQRAACYLPVLPTL------HGIRAWTGFRAASPDGLP 314
Query: 441 VIGPVPGLSK-VFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+IGP + V+LA GHEGLG++ +L TA+L+A ++ + + P+
Sbjct: 315 LIGPAGDFAPGVWLAVGHEGLGVTTSLATAKLLAAQIVQSGTAIPLDPY 363
>gi|296390353|ref|ZP_06879828.1| hypothetical protein PaerPAb_19466 [Pseudomonas aeruginosa PAb1]
Length = 208
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 26/204 (12%)
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
S +A+V+A G +G E+ ++P++P+KGHLL+ + + L H +E GYV
Sbjct: 20 SAEALVLANGIHAG----------ELCAELPIRPKKGHLLITDRYPG-TLRHQLVELGYV 68
Query: 348 GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAA 407
+ S++ A G + LGSSRQF + +VE ++ R+ +RA
Sbjct: 69 S---------SAHASSGTSVAFNAQPRPTGQVFLGSSRQFDTLDPQVEGPVLARMLRRAL 119
Query: 408 EFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALG 467
++ P L L + + G R PDG P++G P ++LA GHEGLG++ A G
Sbjct: 120 DYLPGLAGL------NAIRAWTGFRAATPDGLPLLGEHPAQPGLWLAVGHEGLGVTTAPG 173
Query: 468 TAELVADMVLTNPLKVDSAPFAVQ 491
+A L+A + +D+ P+ Q
Sbjct: 174 SARLLAAQLFGETPPLDATPYLPQ 197
>gi|398904630|ref|ZP_10652413.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM50]
gi|398175589|gb|EJM63337.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM50]
Length = 419
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 180/446 (40%), Gaps = 89/446 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG + A QL L VA++D P AT A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASCAYQLSKHKHLKVALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRD-QGLDPL 165
+D AL+SN ++ L L++ G+D
Sbjct: 64 IFFRMMSANRKREAQGAAVAVDSSTPHILPQSFFDFALQSNAMYPDLHRELQENHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L +AEP V ++R
Sbjct: 122 --FKFEKTGLKFVIYDDEDRLYAEHIVACIPHLADQVRWLDQAALREAEPS--VSHEARG 177
Query: 226 A--FLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS 282
A FL D Q+ LA AY E A + +++ VT +L S V VQT+
Sbjct: 178 ALEFL-CDHQVSPFRLADAYTEG-----ARQNGVDLYFNTNVTGVLHHGS--RVSGVQTA 229
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
+ ++ ++ AAG W+ L E + IPV P KG +L+ E + +
Sbjct: 230 EAGVFHCDTLINAAGAWAADL-----SEQATGIRIPVNPVKGQILLTERMPKILHGCLTT 284
Query: 343 EAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRI 402
YV D +G+IL +GS+ + GF+ I +
Sbjct: 285 SDCYVAQKD---------NGEIL---------------IGSTTEDKGFDVTTTYPEISGL 320
Query: 403 WKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGL 462
+ A P L D+ L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 321 VQGAVRCIPALADINL------KRCWAGLRPGSPDELPILGPMKGVEGYLNACGHFRTGI 374
Query: 463 SLALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V PL +D PF
Sbjct: 375 LTSAITGVLLDKLVNNEPLPLDITPF 400
>gi|229103439|ref|ZP_04234121.1| Sarcosine oxidase, beta subunit [Bacillus cereus Rock3-28]
gi|228679935|gb|EEL34130.1| Sarcosine oxidase, beta subunit [Bacillus cereus Rock3-28]
Length = 342
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 166/359 (46%), Gaps = 56/359 (15%)
Query: 131 VHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKE 190
+ + PG + ++L S KL L++ L ++ GS+L+ + EE+ ++
Sbjct: 3 IDKDPGFD-SQMSLVSQKLVTDLSEELE-------HSFEYRAPGSILVCESDEEMEAAQQ 54
Query: 191 RVKQLCEAGLRAEYLSSSDLLQAEP----ELMVGED--SRAAFLPYDSQLDAMLAVAYIE 244
V + +AGL L D+ + P +L+ G + + + PY +LA + +
Sbjct: 55 WVNRQKDAGLPFRMLDRQDIREESPFFADDLLGGLECATDSTVNPY------LLAFSLLA 108
Query: 245 KGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLM 304
+ + A + E ++ + G V+T+ T ++ K +V AAG W+ +
Sbjct: 109 ESKKMGAKAINHTEVKE------MKRDIDGSF-IVETTNGT-FTAKQVVNAAGVWAPKIG 160
Query: 305 HDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQ------ 358
L ++IP++PRKGH++V + ME GY+ ++ G+
Sbjct: 161 QML------DVNIPIEPRKGHIIVASRQQHVGCRKV-MEFGYL----ISKFGGKRKVDAL 209
Query: 359 -VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLC 417
+G L T + N ++GSSR+F GF+T + +I I RA FYPK+ D+
Sbjct: 210 TEKYGVALVFEPTESQ----NFLIGSSREFVGFHTRINNEVIKCIANRAIRFYPKMADMM 265
Query: 418 LADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
+ + GLRP+ D P+I V + ++A GHEG G+SLA T +++ +++
Sbjct: 266 VI------RSYAGLRPWTEDHLPIISRVDHIPNYYIAAGHEGDGISLAAVTGKVIEELL 318
>gi|405372572|ref|ZP_11027647.1| Glycine oxidase ThiO [Chondromyces apiculatus DSM 436]
gi|397088146|gb|EJJ19143.1| Glycine oxidase ThiO [Myxococcus sp. (contaminant ex DSM 436)]
Length = 372
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 181/414 (43%), Gaps = 65/414 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI--WMVHRTPGSEIW 140
DVII+G GI+G IA +L + + V V+++ +P + A+ A G + M PG+
Sbjct: 5 DVIIVGGGIMGCGIALRLRQ-AGVRVVVLERSIPGAEASSAAAGMLAPQMESEGPGA-FL 62
Query: 141 DLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
+L LRS L+ A LR+ G+D + ++ +G L + L L V G
Sbjct: 63 ELCLRSRGLYPAFAAELRELSGVD----VAYRPSGILKVAFDEAGLHHLDATVAWQRGMG 118
Query: 200 LRAEYLSSSDLLQAEPEL---MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRY 256
LRAE L + EP L VG AA P D Q+D L V + A+
Sbjct: 119 LRAELLDGASARALEPRLSEKAVG----AAHFPDDHQVDNRLLVRALT-----MAAARVG 169
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
AEF V +++ G V L + A+V+AAG WS +L+H E V
Sbjct: 170 AEFRSGYVRGVVQEG--GRAVGVDLDGEVLRAG-AVVLAAGSWS-ALVHGAGVEARAV-- 223
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
+P +G ++ + L E GY + TD
Sbjct: 224 ---RPARGQMVQFQTRLPLMERVLVSEKGY----------------------LVPRTD-- 256
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
G ++ GS+ + GF+ +V + RI A E P+L + + + G RP+
Sbjct: 257 GRVIAGSTMELVGFDKQVTAAGLARILDMALELCPELGSAPVTETWA------GFRPWTE 310
Query: 437 DGKPVIG--PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
D +P +G PVPGL FLATGH G+ LA TA+LVA VL VD APF
Sbjct: 311 DKRPYLGEGPVPGL---FLATGHFRNGILLAPITAKLVAQAVLGEKAAVDLAPF 361
>gi|398843498|ref|ZP_10600640.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM102]
gi|398102289|gb|EJL92471.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM102]
Length = 419
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 178/445 (40%), Gaps = 87/445 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG + A QL L VA++D P AT A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASCAYQLSKRKHLKVALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRD-QGLDPL 165
+D AL+SN ++ L L++ G+D
Sbjct: 64 IFFRMMSANRKREAQGAAVAVDSSTPHILPQSFFDFALQSNAMYPDLHRELQENHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L +AEP V ++R
Sbjct: 122 --FKFEKTGLKFVIYDDEDRLYAEHIVACIPHLADQVRWLDQAALRKAEPS--VSHEARG 177
Query: 226 AF-LPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
A D Q+ LA AY E A + +++ VT +L S V VQT++
Sbjct: 178 ALEFLCDHQVSPFRLADAYTEG-----ARQNGVDLYFNTNVTGVLHHGS--RVSGVQTAE 230
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
++ ++ AAG W+ L E + IPV P KG +L+ E + +
Sbjct: 231 AGVFHCDTLINAAGAWAADL-----SEQATGIRIPVNPVKGQILLTERMPKILHGCLTTS 285
Query: 344 AGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIW 403
YV D +G+IL +GS+ + GF+ I +
Sbjct: 286 DCYVAQKD---------NGEIL---------------IGSTTEDKGFDVTTTYPEISGLV 321
Query: 404 KRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLS 463
+ A P L D IS ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 322 QGALRCIPALAD------ISLKRCWAGLRPGSPDELPILGPMKGVEGYLNACGHFRTGIL 375
Query: 464 LALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V PL +D PF
Sbjct: 376 TSAITGVLLDKLVNNEPLPLDITPF 400
>gi|444371882|ref|ZP_21171391.1| FAD dependent oxidoreductase, partial [Burkholderia cenocepacia
K56-2Valvano]
gi|443594496|gb|ELT63143.1| FAD dependent oxidoreductase, partial [Burkholderia cenocepacia
K56-2Valvano]
Length = 322
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 159/364 (43%), Gaps = 53/364 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A +L L V VVD GATGAG G+ +V + L
Sbjct: 7 DVVVIGAGIVGAACAHEL-AQRGLRVLVVDDA--SGGATGAGMGH--LVAMDDNAAELAL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S +LW+ L+ + D ++ G+L + E+ + + + L G+
Sbjct: 62 SHYSIELWRALSGEMPDG-------CAYRNCGTLWLAADAHEMDLARAKQATLAAHGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E + ++ L Q EP L G A +P D+ L A + ++ + + A
Sbjct: 115 ELIDAAALAQLEPMLRAGLGG-ALKIPGDAILYAPVTANWLLQRAPRVTVRRERAVAVDG 173
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
P L S + L +++ +VVA G + +L+ +L P++P+
Sbjct: 174 PSVTL-------------ASGDVLRAER-VVVANGVAARTLLPEL----------PLRPK 209
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KGHLL+ + + ++H +E GY + S++ G L++G
Sbjct: 210 KGHLLITDRYPG-HVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLLIG 259
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
SSRQF + +VE ++ R+ +RA + P L DL + + G R PDG P++
Sbjct: 260 SSRQFDTEDAQVEPPVLARMLRRAVGYLPALADL------NGIRAWTGFRSASPDGLPLL 313
Query: 443 GPVP 446
G P
Sbjct: 314 GEHP 317
>gi|357408810|ref|YP_004920733.1| Oxidoreductase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337763759|emb|CCB72469.1| Oxidoreductase [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 392
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 178/408 (43%), Gaps = 42/408 (10%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI++GAG+ G A + LSV VVD+ G TGAG+G + + + PG E+ L
Sbjct: 5 DVIVVGAGMTGAACAYYAAR-AGLSVTVVDRGPVAGGTTGAGEGNLLVSDKEPGPELR-L 62
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
AL S +LW+ LA + I ++ G L++ P + L++ AG+ A
Sbjct: 63 ALLSAQLWRRLAGRFGPE-------IEYEPKGGLVVAADPARMAALRDLAAGQRAAGVVA 115
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLD--AMLAVAYIEKGNRHFASKGRYAEFY 260
E + + L EP L G + P D+Q+ A G+R + R E
Sbjct: 116 EEVPADRLHDLEPHLAPGPAGGFHY-PQDAQVQPALAAAHLLRAAGDR---VRLRLGEE- 170
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
VT +L + GEV V T L++ +V AAG G+L +PV+
Sbjct: 171 ---VTAVL-TGPHGEVSGVATGTGELHAPH-VVNAAGVHGGALARSAGTH------LPVQ 219
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
PR+G +LV E L + H A YV D+ + L S G ++
Sbjct: 220 PRRGFVLVTEALPPL-VRHKVYAADYVA--DVA------SDSAGLQTSAVVEGTAAGPVL 270
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+G+SR+ GF+ + + R+ A +P L + + G RPY+PD P
Sbjct: 271 IGASRERVGFDRTLSPAALRRLAAGATALFPVLAG------VRVMRAYPGFRPYLPDHLP 324
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
IG P + + A GHEG G+ LA T +V ++ +D PF
Sbjct: 325 AIGADPHVPGLLHACGHEGAGIGLAPATGLIVTRLLTGGEPPLDIGPF 372
>gi|383648319|ref|ZP_09958725.1| oxidoreductase [Streptomyces chartreusis NRRL 12338]
Length = 368
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 154/356 (43%), Gaps = 38/356 (10%)
Query: 133 RTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERV 192
+ PG E+ DLAL S +LW LA +GL + + ++ G +++ T E L L+
Sbjct: 41 KEPGPEL-DLALLSARLWSELAQ----EGLG--KAVEYEAKGGVVVAGTGEALAGLETLA 93
Query: 193 KQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS 252
AG+ A + L EP L G + P D+Q+ LA A++ + +
Sbjct: 94 AGQRAAGVEAVPVPPGRLPDLEPYLTPGLAGGVHY-PQDAQVMPALAAAHLLRASNARLL 152
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312
GR +T +LR G V V+T + +++ A+V A+G W G +
Sbjct: 153 TGRE-------MTGVLR-GPDGAVRGVRTDRGDVHAP-AVVNASGTWGGEVA------AR 197
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+ +PV PR+G +LV E + ++ H A YV + L S
Sbjct: 198 AGVSLPVLPRRGFVLVTEPLPT-RIRHKVYAADYVAD--------VASDSADLQTSPVVE 248
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G +++G+SR+ GF+ + + + A +P L + + G R
Sbjct: 249 GTPAGPVLIGASRERVGFDRSLSLPALRALAAGATRLFPFLAG------VRAMRTYAGFR 302
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PY+PD P IGP P + A GHEG G+ LA GT L+A + +D PF
Sbjct: 303 PYLPDHLPAIGPDPRAPGLLHACGHEGAGIGLATGTGHLIAQALTGRTPDLDLVPF 358
>gi|386352180|ref|YP_006050427.1| oxidoreductase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365810259|gb|AEW98474.1| oxidoreductase [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 394
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 178/408 (43%), Gaps = 42/408 (10%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DVI++GAG+ G A + LSV VVD+ G TGAG+G + + + PG E+ L
Sbjct: 7 DVIVVGAGMTGAACAYYAAR-AGLSVTVVDRGPVAGGTTGAGEGNLLVSDKEPGPELR-L 64
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
AL S +LW+ LA + I ++ G L++ P + L++ AG+ A
Sbjct: 65 ALLSAQLWRRLAGRFGPE-------IEYEPKGGLVVAADPARMAALRDLAAGQRAAGVVA 117
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLD--AMLAVAYIEKGNRHFASKGRYAEFY 260
E + + L EP L G + P D+Q+ A G+R + R E
Sbjct: 118 EEVPADRLHDLEPHLAPGPAGGFHY-PQDAQVQPALAAAHLLRAAGDR---VRLRLGEE- 172
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
VT +L + GEV V T L++ +V AAG G+L +PV+
Sbjct: 173 ---VTAVL-TGPHGEVSGVATGTGELHAPH-VVNAAGVHGGALARSAGTH------LPVQ 221
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
PR+G +LV E L + H A YV D+ + L S G ++
Sbjct: 222 PRRGFVLVTEALPPL-VRHKVYAADYVA--DVA------SDSAGLQTSAVVEGTAAGPVL 272
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+G+SR+ GF+ + + R+ A +P L + + G RPY+PD P
Sbjct: 273 IGASRERVGFDRTLSPAALRRLAAGATALFPVLAG------VRVMRAYPGFRPYLPDHLP 326
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
IG P + + A GHEG G+ LA T +V ++ +D PF
Sbjct: 327 AIGADPHVPGLLHACGHEGAGIGLAPATGLIVTRLLTGGEPPLDIGPF 374
>gi|167572198|ref|ZP_02365072.1| oxidoreductase, FAD-binding family protein [Burkholderia
oklahomensis C6786]
Length = 377
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 171/408 (41%), Gaps = 57/408 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAGI+G A + + VV G G G +V + L
Sbjct: 7 DVVVIGAGIVGAACAHEFA-----QRGLRVVVVDDGGGGATGAGMGHLVAMDDNAAELAL 61
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
S LW L D++ D ++ G+L + E+ + + + L E G+
Sbjct: 62 THHSIALWSGLRDAMPDG-------CAYRNCGTLWLAADAHEMDLARAKQAALAERGVAG 114
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYH 261
E + + L EP M+ D A +P D L A A ++ +
Sbjct: 115 ELIDRATLAALEP--MLRADLGGALKIPGDGILYAPAAANWL---------------LHR 157
Query: 262 DPVTCLLRSNSTG-EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
P L R+ + E V + +VVA G + +L+ +L P++
Sbjct: 158 LPGVTLRRAKAVAVEGPGVTLESGDTLRAERVVVANGVAARALLPEL----------PLR 207
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + + +++H +E GY + S++ G L+
Sbjct: 208 PKKGHLLITDRYPA-QVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLL 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF + VE ++ R+ +RA + P L L + + G R PDG P
Sbjct: 258 IGSSRQFDTEDPRVEAPVLARMLRRAVGYLPALAGL------NGIRAWTGFRSASPDGLP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
++G P ++LA GHEGLG++ A G+A ++A ++ +D P+
Sbjct: 312 LLGEHPSQRGLWLAVGHEGLGVTTAPGSARVLAALMFGERAAIDVEPY 359
>gi|389684027|ref|ZP_10175358.1| hydrogen cyanide synthase HcnC [Pseudomonas chlororaphis O6]
gi|388552366|gb|EIM15628.1| hydrogen cyanide synthase HcnC [Pseudomonas chlororaphis O6]
Length = 418
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 180/444 (40%), Gaps = 85/444 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG + A QL +L VA++D P AT A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASCAYQLSKRKNLRVALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDPL 165
+D AL+SN L+ L LR++ G+D
Sbjct: 64 IFFRMMSARNKRQAQGSAVLVDSSTPHILPQSFFDFALQSNGLYPQLHQELRERHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L +AEP +
Sbjct: 122 --FKFERTGLKFVIYDDEDRLYAEHIVACIPHLAHQVRWLDQAALRKAEPNVSHHAQGAL 179
Query: 226 AFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKN 284
FL D Q++ LA AY E A + +++ VT +L S + VQT++
Sbjct: 180 EFL-CDHQVNPFRLADAYTEG-----ARQNGVDMYFNTNVTGVLHQGS--RISGVQTAEA 231
Query: 285 TLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEA 344
L+ ++ AAG W+ L L+ T IPVKP KG +L+ E L +
Sbjct: 232 GLFHCDTLINAAGAWAAELS---LQATGA--SIPVKPVKGQILLTERMPQLLNGCLTTSD 286
Query: 345 GYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWK 404
Y+ D +G+IL +GS+ + GF+ I + +
Sbjct: 287 CYMAQKD---------NGEIL---------------IGSTTEDKGFDISTTYREIQGLVQ 322
Query: 405 RAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
A P+L + L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 323 GAVRCVPQLEQVNL------KRCWAGLRPGSPDELPILGPMCGVEGYLNACGHFRTGILT 376
Query: 465 ALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V L +D PF
Sbjct: 377 SAITGVLLDRLVNEEALPLDITPF 400
>gi|167567150|ref|ZP_02360066.1| oxidoreductase, FAD-binding family protein [Burkholderia
oklahomensis EO147]
Length = 377
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 148/345 (42%), Gaps = 52/345 (15%)
Query: 146 SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYL 205
S LW L D++ D ++ G+L + E+ + + + L E G+ E +
Sbjct: 65 SIALWSGLRDAMPDG-------CAYRNCGTLWLAADAHEMDLARAKQAALAERGVAGELI 117
Query: 206 SSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPV 264
+ L EP M+ D A +P D L A A ++ + P
Sbjct: 118 DRATLAALEP--MLRADLGGALKIPGDGILYAPAAANWL---------------LHRLPG 160
Query: 265 TCLLRSNSTG-EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
L R+ + E V + +VVA G + +L+ +L P++P+K
Sbjct: 161 VTLRRAKAVAVEGPGVTLESGDTLRAERVVVANGVAARALLPEL----------PLRPKK 210
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
GHLL+ + + + +++H +E GY + S++ G L++GS
Sbjct: 211 GHLLITDRYPA-QVSHQLVELGYAA---------SAHASDGTSVAFNVQPRPTGQLLIGS 260
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
SRQF + VE ++ R+ +RA + P L L + + G R PDG P++G
Sbjct: 261 SRQFDTEDPRVEAPVLARMLRRAVGYLPALAGL------NGIRAWTGFRSASPDGLPLLG 314
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P ++LA GHEGLG++ A G+A ++A ++ +D P+
Sbjct: 315 EHPSQRGLWLAVGHEGLGVTTAPGSARVLAALMFGERAAIDVEPY 359
>gi|442320688|ref|YP_007360709.1| glycine oxidase ThiO [Myxococcus stipitatus DSM 14675]
gi|441488330|gb|AGC45025.1| glycine oxidase ThiO [Myxococcus stipitatus DSM 14675]
Length = 371
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 183/411 (44%), Gaps = 59/411 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI--WMVHRTPGSEIW 140
DVII+G GI+G IA +L + V V+++ +P + A+ A G + M PG
Sbjct: 5 DVIIVGGGIMGCGIALRLR-QAGARVTVLERSIPGAEASSAAAGMLAPQMEADGPGP-FL 62
Query: 141 DLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
+L LRS L+ A+ LR+ G+D I ++ +G L + T + ++ V G
Sbjct: 63 ELCLRSRGLYPAFAEELRELSGVD----IAYRSSGVLKVAFTEATVHHIEATVLWQRGMG 118
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
LRAE L + EP L + AA P D Q+D L V + ++ AEF
Sbjct: 119 LRAELLDGAQARALEPRLSP-KALAAAHFPDDHQVDNRLLVRALT-----MSAARAGAEF 172
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
V ++ + G V L + A+V+AAG WS SL+ E + V
Sbjct: 173 RSGYVRGIV--HEAGRAVGVDLDGEVLRAD-AVVLAAGSWS-SLVQGAGVEAK-----SV 223
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+P +G ++ L+ L + + E GYV G +
Sbjct: 224 RPARGQMIQLQTRLPLVDHILTSEKGYV------------------------VPRADGRV 259
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
+ GS+ + GF+ +V + RI A E P+L D + + + G RP+ D +
Sbjct: 260 IAGSTMELVGFDKQVTAAGLARILDMALELCPELADAPVTETWA------GFRPWTEDKR 313
Query: 440 PVIG--PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P +G P+PGL FLATGH G+ LA TA+LVA +L +D APF
Sbjct: 314 PYLGEGPMPGL---FLATGHFRNGILLAPITAKLVAQALLGERTSMDLAPF 361
>gi|418292721|ref|ZP_12904651.1| FAD-binding oxidoreductase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379064134|gb|EHY76877.1| FAD-binding oxidoreductase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 367
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 186/419 (44%), Gaps = 67/419 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGS 137
DVI+IGAGIIGL A QL G+ V +++ A+ AG G Y W +
Sbjct: 3 DVIVIGAGIIGLLSAYQL-AGAGRQVVLLEAGEAGREASWAGGGIVSPLYPWRYS----A 57
Query: 138 EIWDLALRSNKLWKMLADSLRDQG-LDPLQVIGWKQTGSLLIGRTPE-ELVMLKERVKQL 195
+ LA S + + LR+Q +DP +V +TG + E E + ER
Sbjct: 58 AVTALAHWSQDFYPGFGERLREQAAVDP-EV---HETGLYWLDLQDEDEALAWAER---- 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQL-DAMLAVAYIEKGNRHFASKG 254
G ++ + A P L G S+A F+P + + + L A E R +
Sbjct: 110 --QGRPLRRVAMEQVRAAVPALGEGF-SKALFMPGVANVRNPRLLRALREALGRM--ANV 164
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
R E H PVT +R + VQT++ + +++ +VVAAG WSG L+ L
Sbjct: 165 RVVE--HCPVTGFVREGR--RILGVQTAQGEMRAER-VVVAAGAWSGELLATL------G 213
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
L++PVKP KG +++ F + SM +L+ A
Sbjct: 214 LELPVKPMKGQMIL---FKCAEDFLPSM---------------------VLAKRRYAIPR 249
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
G++++GS+ + GF+ + ++ + A E P L D + + GLRP
Sbjct: 250 RDGHILVGSTLEDVGFDKTPTEDALESLRATAVELLPALADAQVVKHWA------GLRPG 303
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PDG P IGPV G ++L GH GL LA + +L+ D++L VD +P+A GR
Sbjct: 304 SPDGVPYIGPVSGFDGLWLNCGHFRNGLVLAPASCQLLVDLMLGQAPIVDPSPYAPTGR 362
>gi|108760745|ref|YP_632406.1| glycine oxidase ThiO [Myxococcus xanthus DK 1622]
gi|108464625|gb|ABF89810.1| glycine oxidase ThiO [Myxococcus xanthus DK 1622]
Length = 372
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 177/411 (43%), Gaps = 59/411 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI--WMVHRTPGSEIW 140
DVII+G GI+G IA +L + + V V+++ +P + A+ A G + M PG+
Sbjct: 5 DVIIVGGGIMGCGIALRLRQ-AGVRVVVLERSIPGAEASSAAAGMLAPQMESDGPGA-FL 62
Query: 141 DLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
+L LRS L+ A LR+ G+D + ++ G L + L L V G
Sbjct: 63 ELCLRSRGLYPAFAAELRELSGVD----VAYRPCGILKVAFNEASLHHLDATVAWQRGMG 118
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
LRAE L + EP L + AA P D QLD L V + AEF
Sbjct: 119 LRAELLDGAAARALEPRLSA-KAVGAAHFPDDHQLDNRLLVRALTMAAARLG-----AEF 172
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
V +++ G V L + A+V+AAG WS +L+H E V
Sbjct: 173 RSGYVRGVVQEG--GRAVGVDLDGELLRA-DAVVLAAGSWS-ALVHGAGVEARA-----V 223
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+P +G ++ + L + E GY + D G +
Sbjct: 224 RPARGQMVQFQTRLPLLDRIVTSEKGY----------------------LVPRAD--GRV 259
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
+ GS+ + GF+ +V + RI A E P+L + + + G RP+ D +
Sbjct: 260 IAGSTMELVGFDKQVTAAGLARILDMALELCPELGSAPVTETWA------GFRPWTEDKR 313
Query: 440 PVI--GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P + GPVPGL FLATGH G+ LA TA+LVA VL VD APF
Sbjct: 314 PYLGEGPVPGL---FLATGHFRNGILLAPITAKLVAQAVLGERPAVDLAPF 361
>gi|398858601|ref|ZP_10614289.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM79]
gi|398238642|gb|EJN24365.1| glycine/D-amino acid oxidase, deaminating [Pseudomonas sp. GM79]
Length = 419
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 179/446 (40%), Gaps = 89/446 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G IG + A QL L VA++D P AT A G +W + + G
Sbjct: 5 YDVVIAGGGAIGASCAYQLSKRKHLKVALIDAKRP-GNATRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRD-QGLDPL 165
+D AL+SN ++ L L++ G+D
Sbjct: 64 IFFRMMSANRKREAQGAAVAVDSSTPHILPQSFFDFALQSNAMYPDLHRELQENHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG + E+ + + V + + +L + L +AEP V ++R
Sbjct: 122 --FKFEKTGLKFVIYDDEDRLYAEHIVACIPHLADQVRWLDQAALREAEPS--VSHEARG 177
Query: 226 A--FLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS 282
A FL D Q+ LA AY E A + +++ VT +L S V VQT+
Sbjct: 178 ALEFL-CDHQVSPFRLADAYTEG-----ARQNGVDLYFNTNVTGVLHHGS--RVSGVQTA 229
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
+ ++ ++ AAG W+ L E + IPV P KG +L+ E + +
Sbjct: 230 EAGVFHCDTLINAAGAWAADL-----SEQATGIRIPVNPVKGQILLTERMPKILHGCLTT 284
Query: 343 EAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRI 402
YV D +G+IL +GS+ + GF+ I +
Sbjct: 285 SDCYVAQKD---------NGEIL---------------IGSTTEDKGFDVTTTYPEISGL 320
Query: 403 WKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGL 462
+ A P L D IS ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 321 VQGALRCIPALAD------ISLKRCWAGLRPGSPDELPILGPMKGVEGYLNACGHFRTGI 374
Query: 463 SLALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V PL +D PF
Sbjct: 375 LTSAITGVLLDKLVNNEPLPLDITPF 400
>gi|294624016|ref|ZP_06702788.1| D-amino acid oxidase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292601685|gb|EFF45650.1| D-amino acid oxidase [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
Length = 232
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 18/174 (10%)
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QILSISMT 370
+++ ++ ++PRKGHL++ + L + H +E GY HG S++
Sbjct: 61 QLLPELALRPRKGHLVITDRHPGL-IRHQLLELGYA----------DSAHGADDTSVAFN 109
Query: 371 ATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIG 430
G +++GSSRQF + + ++ ++ +RA + P LR+L +V G
Sbjct: 110 VQPRPTGQILIGSSRQFGEHDRALSMPVLQQMLQRAFAYLPVLREL------QAIRVWTG 163
Query: 431 LRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVD 484
LRP PDG+P +G VPG V++A GHEGLG++ ALG+A ++ D +L +D
Sbjct: 164 LRPATPDGRPYLGKVPGRRDVWVAAGHEGLGVTTALGSARVIVDSLLGRTPAID 217
>gi|311281086|ref|YP_003943317.1| FAD dependent oxidoreductase [Enterobacter cloacae SCF1]
gi|308750281|gb|ADO50033.1| FAD dependent oxidoreductase [Enterobacter cloacae SCF1]
Length = 369
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 160/378 (42%), Gaps = 52/378 (13%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
L V ++D P GAT AG G++ + P +E+ L+ S +LW+ L L D
Sbjct: 27 LQVTLIDDGQP--GATAAGMGHLVCMDDDP-AEL-TLSAWSLRLWRELTPRLPDD----- 77
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
W+ G+L + +++ + E+ +++ A R+E +++ + Q EP L G +
Sbjct: 78 --CAWRGCGTLWLAENDDDMAVAHEKQRRMAAAQTRSELQTTAQVAQREPLLRAGL-AGG 134
Query: 226 AFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT 285
++P D + A ++ A G D V + E AV
Sbjct: 135 LWVPDDGIVYAPNVARWL------IADAGARLTHLRDGVRAI-------EEPAVLLHSGK 181
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
AIVVA G + +L+ + ++ +KG L + E + + H +E G
Sbjct: 182 RLQAAAIVVACGLGANTLLEENW----------LRAKKGQLAITERCGA-PVRHQLVELG 230
Query: 346 YVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKR 405
Y G H S++ G L++GSSR+F ++ ++ + R
Sbjct: 231 Y----------GASAHAGGTSVAFNVQPRPTGQLLIGSSREFDNTERALDLPLLGTMLAR 280
Query: 406 AAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLA 465
A F P + L + S G R DG P+IGP P ++LA GHEGLG++ A
Sbjct: 281 ARRFLPSIASLTIIRCWS------GYRAASLDGNPLIGPHPSRRGIWLALGHEGLGVTTA 334
Query: 466 LGTAELVADMVLTNPLKV 483
TA L+A +L P V
Sbjct: 335 PATAHLLAAQLLEEPSPV 352
>gi|260778066|ref|ZP_05886959.1| hydrogen cyanide synthase HcnC [Vibrio coralliilyticus ATCC
BAA-450]
gi|260606079|gb|EEX32364.1| hydrogen cyanide synthase HcnC [Vibrio coralliilyticus ATCC
BAA-450]
Length = 417
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 188/446 (42%), Gaps = 87/446 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG +IA L DL +AVVD P A+ A G +W + + G
Sbjct: 4 YDVVICGGGVIGASIAYFLSRQKDLKIAVVDFKYP-GNASRASAGGLWAMGESTGLGCGV 62
Query: 137 ---------------------------SEIWDLALRSNKLWKMLADSL-RDQGLDPLQVI 168
+D+A+ SN ++ L + L + G+D
Sbjct: 63 ILFKTLSKQMQESGANEAPEMNPHIMPEPFFDMAMMSNAMYPALYEELVENHGVD----F 118
Query: 169 GWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF- 227
+++TG + + + ++ + ++S +L EP V +D+ A
Sbjct: 119 KFERTGLKFVMFDKYDRMYAEQIAAAVPNRHNHVRWVSQEELHSEEPN--VSKDAIGAME 176
Query: 228 LPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFY-HDPVTCLLRSNSTGEVEAVQTSKNT 285
D Q++ L AY+E A++ E Y + VT + R + V AV+T +
Sbjct: 177 FDCDHQINPYRLNEAYLE------AARQNGVELYLNTKVTGVERQGN--RVTAVKTEQGV 228
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
L K +V AAG W+ + + + +PV P KG +++ E L +
Sbjct: 229 L-PCKMMVNAAGAWA-----ETISQWATGYKLPVFPVKGQVIITEKLPKLLNGCLTTSDC 282
Query: 346 YVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKR 405
Y+ D +G+IL +GS+ + GF+T + I ++ +
Sbjct: 283 YIAQKD---------NGEIL---------------IGSTTEERGFDTSNDIKYIKQLGQG 318
Query: 406 AAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLA 465
A + P L+D+ + ++ GLRP PD P++GPVPG+ A GH G+ +
Sbjct: 319 AMKSIPALKDMNI------KRCWAGLRPGSPDELPILGPVPGVEGYLNACGHFRTGMLTS 372
Query: 466 LGTAELVADMVLTNPLKVDSAPFAVQ 491
T ++ ++V + P VD +PF+ Q
Sbjct: 373 AITGRILDELVRSLPTCVDISPFSYQ 398
>gi|424743036|ref|ZP_18171353.1| putative glycine oxidase ThiO [Acinetobacter baumannii WC-141]
gi|422943681|gb|EKU38694.1| putative glycine oxidase ThiO [Acinetobacter baumannii WC-141]
Length = 371
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 171/414 (41%), Gaps = 63/414 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
+I S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QIAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ + +
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLISYLKQQPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHTPVKKLIQQGDV--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
DIPV+P +G +L+ + P ++ M +
Sbjct: 218 DIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G++V GSS GF+T ++T I + E P+L D + + GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPELADFPIV------QRWAGLRPSS 307
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 308 PNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLAQPTLVDAKAYS 361
>gi|34497137|ref|NP_901352.1| hydrogen cyanide synthase HcnC [Chromobacterium violaceum ATCC
12472]
gi|34102994|gb|AAQ59357.1| hydrogen cyanide synthase HcnC [Chromobacterium violaceum ATCC
12472]
Length = 419
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 177/444 (39%), Gaps = 85/444 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+D++I G G+IG + A QL DL +A++D P A+ A G +W + + G
Sbjct: 5 YDIVIAGGGVIGASCAYQLSKRRDLKIALIDSKRP-GNASRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSL-RDQGLDPL 165
+D AL SN L+ L L + G+D
Sbjct: 64 IFFRMTSAKRKREAAGAAVAVDASTPHILPQSFFDFALASNALYPALHQELMENHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+++TG I E+ + + Q+ +L + L ++EP + GE A
Sbjct: 122 --FKFERTGLKYIIYDEEDQLYAEHIAAQIPHLASEVSWLDRAQLRESEP-YVSGEAQGA 178
Query: 226 AFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKN 284
D Q+ L AY E A + F++ VT + R S V V+T++
Sbjct: 179 LEFLCDHQVSPFRLTDAYTEA-----ARQNGVDVFFNVNVTGVTRQGS--RVTGVRTAEA 231
Query: 285 TLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEA 344
+S ++ A G W+ L T IPVKP KG +++ E L +
Sbjct: 232 GDFSCNTLINAGGSWAAELSRWATGRT-----IPVKPVKGQIVLSEKMPKLLRGCITTSD 286
Query: 345 GYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWK 404
Y+ D +G+IL +GS+ + G++T + I+ + +
Sbjct: 287 CYIAQKD---------NGEIL---------------IGSTTEDKGYDTAITYPEINGLVQ 322
Query: 405 RAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
A P+L ++ + ++ GLRP PD P++GP G+ A GH G+
Sbjct: 323 GAIRCVPELANVNI------KRCWAGLRPGTPDELPILGPEDGVEGYLNACGHFRTGILT 376
Query: 465 ALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V PL +D APF
Sbjct: 377 SAITGVLLNGLVRGEPLPLDIAPF 400
>gi|453054649|gb|EMF02099.1| D-amino-acid oxidase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 385
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 173/383 (45%), Gaps = 37/383 (9%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
LSV V+D+ G TGAG+G + + + PG E+ LAL S +LW+ L D L
Sbjct: 30 LSVTVIDRGPVAGGTTGAGEGNLLVSDKEPGPEL-QLALLSTRLWRELTDVLP------- 81
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
+ ++ G L++ L+ + AG+ A + + L EP L G
Sbjct: 82 AAVEYEAKGGLVVAADAAGADALRAFAARQAAAGVTALDVPADRLRDLEPHLAPGLAGGV 141
Query: 226 AFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT 285
+ P D+Q+ LA A++ + A+ GR +PVT +L + G V V+T
Sbjct: 142 RY-PQDAQVQPALAAAHLLR-----AAGGRVRVRTGEPVTAVL-TGPGGAVRGVRTPAGA 194
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
+++ +V AAG W G D+ R L PV PR+G +LV E + + H A
Sbjct: 195 VHAPY-LVNAAGTWGG----DVARLAGARL--PVLPRRGFVLVTEPLPRV-VRHKVYAAD 246
Query: 346 YVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKR 405
YV D+ + L S G +++G+SR+ GF+ + + R+
Sbjct: 247 YV--TDVA------SGSAALQTSAVVEGTPAGPVLIGASRERVGFDRTLSTEALRRLAAG 298
Query: 406 AAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLA 465
A +P LR + + G RPY+PD P IGP P + + A GHEG G+ LA
Sbjct: 299 ATALFPVLRT------VRATRTYAGFRPYLPDHLPAIGPDPHVPGLLHACGHEGAGIGLA 352
Query: 466 LGTAELVADMVLTNPLKVDSAPF 488
T L+A ++ + VD PF
Sbjct: 353 PATGALIAALLTGDRPPVDPGPF 375
>gi|421675044|ref|ZP_16114970.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC065]
gi|421693394|ref|ZP_16133036.1| putative glycine oxidase ThiO [Acinetobacter baumannii IS-116]
gi|404557897|gb|EKA63185.1| putative glycine oxidase ThiO [Acinetobacter baumannii IS-116]
gi|410383059|gb|EKP35593.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC065]
Length = 371
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 173/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDIGLSYAEQY 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ +
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLISYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHTPVKKLIQQGDA--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
DIPV+P +G +L+ + P ++ M +
Sbjct: 218 DIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLDQPTLVDAKAYS 361
>gi|445446449|ref|ZP_21443327.1| putative glycine oxidase ThiO [Acinetobacter baumannii WC-A-92]
gi|444760260|gb|ELW84714.1| putative glycine oxidase ThiO [Acinetobacter baumannii WC-A-92]
Length = 371
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 174/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPITGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ R+
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLIRYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHTPVKKLIQQGDA--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+IPV+P +G +L+ + P ++ M +
Sbjct: 218 EIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P +D+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLDQPTLIDAKAYS 361
>gi|260552468|ref|ZP_05825844.1| glycine oxidase [Acinetobacter sp. RUH2624]
gi|424056603|ref|ZP_17794121.1| glycine oxidase ThiO [Acinetobacter nosocomialis Ab22222]
gi|425742410|ref|ZP_18860520.1| putative glycine oxidase ThiO [Acinetobacter baumannii WC-487]
gi|260405275|gb|EEW98771.1| glycine oxidase [Acinetobacter sp. RUH2624]
gi|407441053|gb|EKF47568.1| glycine oxidase ThiO [Acinetobacter nosocomialis Ab22222]
gi|425487737|gb|EKU54094.1| putative glycine oxidase ThiO [Acinetobacter baumannii WC-487]
Length = 371
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 174/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEHGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPITGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ R+
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLIRYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHTPVKKLIQQGDV--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+IPV+P +G +L+ + P ++ M +
Sbjct: 218 EIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|256386736|gb|ACU80423.1| hydrogen cyanide synthase C [Pseudomonas sp. 15G2]
Length = 417
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 180/444 (40%), Gaps = 85/444 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG + A QL DL VA++D P A+ A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASCAYQLSKRKDLRVALIDAKRP-GNASRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRD-QGLDPL 165
+D AL+SN+L+ L L G+D
Sbjct: 64 IFFRMMSANRKREAQGSAVVVDSSTPHILPQSFFDFALQSNELYPRLHRELIGLHGMD-- 121
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
++QTG + E+ + + V + + +L + L AEP++
Sbjct: 122 --FKFEQTGLKFVIYDDEDRLYAEHIVGCIPHLSDQVRWLDQAALRAAEPKVSHEAQGAL 179
Query: 226 AFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKN 284
FL D Q++ L AY E A + +++ VT +L + V VQT++
Sbjct: 180 EFL-CDHQVNPFRLTDAYTEG-----ARQNGVDVYFNTNVTGVLHQGN--RVSGVQTAEA 231
Query: 285 TLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEA 344
L+ ++ AAG W+ L L+ T + +IPVKP KG +L+ E L +
Sbjct: 232 GLFHCSTLINAAGAWAAELS---LQATGV--EIPVKPVKGQILLTERMPKLLNGCLTTSD 286
Query: 345 GYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWK 404
Y+ D +G+IL +GS+ + GF+ I+ + +
Sbjct: 287 CYMAQKD---------NGEIL---------------IGSTTEDKGFDVSTTYPEINGLVQ 322
Query: 405 RAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
A P+L + L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 323 GAVRCIPELAQVNL------KRCWAGLRPGSPDELPILGPMDGVEGYLNACGHFRTGILT 376
Query: 465 ALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V L +D PF
Sbjct: 377 SAITGVLLDKLVNDEALPLDITPF 400
>gi|256424546|ref|YP_003125199.1| FAD dependent oxidoreductase [Chitinophaga pinensis DSM 2588]
gi|256039454|gb|ACU62998.1| FAD dependent oxidoreductase [Chitinophaga pinensis DSM 2588]
Length = 415
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 152/352 (43%), Gaps = 49/352 (13%)
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
D+AL S +L++ + + GLD + G L + T E +E +K+ GL
Sbjct: 109 DIALLSKRLYE---EWTQTPGLD----FSYDPQGMLELFNTEENAHHAEETIKEAKSLGL 161
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
A + + L EP+ + A + P D+QL + ++ R + R E
Sbjct: 162 DARLIDKATLQNMEPDTAINALG-AVYFPGDAQLYPNQLMNSLKDWLRTHGVQFRGNE-- 218
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
VT + + +V+ V+T K +Y+ IVVAAG WS DL RE + L IP+
Sbjct: 219 --EVTGFITDGN--KVKGVKT-KTAVYAADHIVVAAGVWS----RDLARELQ--LKIPMV 267
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
+G+ + EN P +V H ILS + A + + GN +
Sbjct: 268 GGRGYSVTFEN-----------------------GPYKVRHSVILSEARVAISPMNGNKI 304
Query: 381 -LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
G + + G N + I + ++P D+ L + V G RP DG
Sbjct: 305 RFGGTMEITGLNAPPRMQRVQGILESVKRYFPAY-DIPLP---AAEDVWYGYRPCSADGL 360
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
P IG + V +ATGH LG+SL T +LV ++V PL +D +PF V+
Sbjct: 361 PHIGTLERYPNVTVATGHSMLGISLGAATGKLVGELVTRAPLSMDISPFKVE 412
>gi|417551193|ref|ZP_12202271.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-18]
gi|417565124|ref|ZP_12215998.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC143]
gi|421788444|ref|ZP_16224744.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-82]
gi|395556880|gb|EJG22881.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC143]
gi|400385648|gb|EJP48723.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-18]
gi|410403056|gb|EKP55158.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-82]
Length = 371
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 174/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDIGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ R+
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLIRYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHTPVKKLIQQGDV--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+IPV+P +G +L+ + P ++ M +
Sbjct: 218 EIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMGNLWANFGHFRNGLCMGSGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|193076650|gb|ABO11337.2| putative D-amino acid oxidase [Acinetobacter baumannii ATCC 17978]
Length = 371
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 173/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDIGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + E + A Y +L + ++ +
Sbjct: 110 QEPMQRCEYLQRDALEQVNPH--ISEQFQEAI--YFPELSNIRNPRVLQSLISYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHTPVKKLIQQGDV--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
DIPV+P +G +L+ + P ++ M +
Sbjct: 218 DIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|448239538|ref|YP_007403596.1| sarcosine oxidase subunit beta [Geobacillus sp. GHH01]
gi|445208380|gb|AGE23845.1| sarcosine oxidase subunit beta [Geobacillus sp. GHH01]
Length = 357
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 172/389 (44%), Gaps = 86/389 (22%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW--DLALRSNKLWKMLADSLRDQGLDPL 165
+ V+DK P SG +GA Q ++W+ ++TP W + ++ S +L+ L+ + D
Sbjct: 31 ILVIDKKFPMSGTSGATQAWVWVHNKTPA---WYAEFSMYSAELYSYLSKKIGD------ 81
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA----GLRAEYLSSSDLLQAEPEL---M 218
+ +++TG L +P V E+ K+L ++ G++ + LS ++L+ EP + +
Sbjct: 82 --VEYRRTGGL----SPFFTVRDLEKAKRLADSYEKIGIKIKVLSREEVLEKEPFINPKV 135
Query: 219 VGEDSRAAFLPYDSQLDAM-LAVAYI---EKGNRHFASKGRYAEFYHDPVTCLLRSNSTG 274
VG A F D ++ L Y+ +K H+++ R V + + N
Sbjct: 136 VG----ATFSRIDGNVNPFRLIDMYMRAAKKNGVHYSTYNR--------VIDIQKQNG-- 181
Query: 275 EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNS 334
+ V S+ T Y+ K +++A G WS L + +DIPV +G +LV E
Sbjct: 182 --QFVVISEKTTYATKNLILAGGPWSRELGR------MVGVDIPVNQVRGQILVSEPLKP 233
Query: 335 LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEV 394
LN+ +G Q N+G++L +G S + AGF+
Sbjct: 234 F-LNYTI--SGL----------RQTNNGEVL---------------IGYSMEQAGFDRST 265
Query: 395 EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLA 454
+I A + P LR + S G+R DG P+IG VP + +++A
Sbjct: 266 TLDVIQETANMAVHYVPSLRKAKIVRTFS------GIRAMPKDGLPIIGRVPDVENLYVA 319
Query: 455 TGHEGLGLSLALGT--AELVADMVLTNPL 481
H G+ LS +GT EL+ D + P+
Sbjct: 320 ATHSGITLSPLIGTIMTELIVDGETSIPI 348
>gi|421627408|ref|ZP_16068218.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC098]
gi|408693090|gb|EKL38702.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC098]
Length = 371
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 173/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDIGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ +
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLISYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHTPVKKLIQQGDV--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
DIPV+P +G +L+ + P ++ M +
Sbjct: 218 DIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|445456569|ref|ZP_21445944.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC047]
gi|444777828|gb|ELX01849.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC047]
Length = 371
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 174/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPITGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ R+
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLIRYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F + PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFENTPVKKLIQQGDA--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
DIPV+P +G +L+ + P ++ M +
Sbjct: 218 DIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|260555796|ref|ZP_05828016.1| glycine oxidase ThiO [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|260410707|gb|EEX04005.1| glycine oxidase ThiO [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|452954215|gb|EME59619.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
MSP4-16]
Length = 371
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 173/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + E + A Y +L + ++ +
Sbjct: 110 QEPMQRCEYLQRDALEQVNPH--ISEQFQEAI--YFPELSNIRNPRVLQSLISYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHTPVKKLIQQGDA--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
DIPV+P +G +L+ + P ++ M +
Sbjct: 218 DIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGRMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|378579859|ref|ZP_09828520.1| D-amino acid dehydrogenase small subunit [Pantoea stewartii subsp.
stewartii DC283]
gi|377817504|gb|EHU00599.1| D-amino acid dehydrogenase small subunit [Pantoea stewartii subsp.
stewartii DC283]
Length = 433
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 178/443 (40%), Gaps = 97/443 (21%)
Query: 84 VIIIGAGIIGLT--------------IARQLLVGSDLSVAVVDKVVPCSGATGAGQG--- 126
V+I+G+G++G+T I RQ + S A ++ P A A G
Sbjct: 3 VVILGSGVVGVTSAWYLARAGHQVTVIDRQPQPAMETSAANAGQISPGYAAPWAAPGVPL 62
Query: 127 --YIWMVHRTPGSEIWDLALRSNK-------LWKML------------------ADSLRD 159
WM R LA+R + +W ML A+ RD
Sbjct: 63 KAMKWMFQRHA-----PLAIRLDGSRFQLEWMWHMLRNCDMQHYQQNKSRMVRLAEYSRD 117
Query: 160 --QGLDPLQVIGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP 215
+ L I + +Q G+L + RT ++ + + L EAG+ E L S L EP
Sbjct: 118 CLKALRAETGIAYEGRQGGTLQLFRTQQQFESASKDIAVLREAGVPYELLESHQLASVEP 177
Query: 216 ELMVGEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST 273
L + LP D D L + K A + ++ P+ LLR +
Sbjct: 178 ALAATQHKLTGGLRLPNDETGDCQLFTQRLAK----MAEEAGVVFRFNTPIDQLLRDGN- 232
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
+ V+ + + + VVA G WS +LM + ++DIPV P KG+ L + N
Sbjct: 233 -RIYGVKCGDEVIKAD-SYVVALGSWSTALMKN-------IVDIPVYPLKGYSLTIPVTN 283
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
+ +++ + A T + +G + GFNT+
Sbjct: 284 ADAAPVSTI---------------------LDETYKVAVTRFDNRIRVGGMAEIVGFNTK 322
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ + + + + YP+ D+ A F + GLRP PDG PV+G P LS ++L
Sbjct: 323 LPEARRETLEMVVTDLYPEGGDVSQASFWT------GLRPMTPDGTPVVGATP-LSNLYL 375
Query: 454 ATGHEGLGLSLALGTAELVADMV 476
TGH LG ++A G+ +L+AD++
Sbjct: 376 NTGHGTLGWTMACGSGQLLADVI 398
>gi|404399616|ref|ZP_10991200.1| hydrogen cyanide synthase HcnC [Pseudomonas fuscovaginae UPB0736]
Length = 422
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 179/445 (40%), Gaps = 85/445 (19%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG---- 136
T+DV+I G G+IG + A L +L +A++D P AT A G +W + + G
Sbjct: 4 TYDVVIAGGGVIGASCAYHLSREKNLRIALIDAKRP-GNATRASAGGLWAIGESVGLGCG 62
Query: 137 -------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDP 164
+D AL+SN L+ L L ++ G+D
Sbjct: 63 VIFFRMMSARRRREAHGAAVVVDSSTPHILPQSFFDFALQSNALYPQLHRELLERHGMD- 121
Query: 165 LQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSR 224
+++TG + E+ + + V + + +L L ++EP + GE
Sbjct: 122 ---CKFERTGLKYVIYDDEDRLYAEHIVSHIPHLADQLRWLDRDALRESEPAVS-GEAQG 177
Query: 225 AAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
A D QL LA +Y E A + F++ VT +L G V V+T++
Sbjct: 178 ALEFLCDHQLSPFRLADSYTEG-----ARQNGVDLFFNTNVTDVLHQG--GRVSGVRTAE 230
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
+ ++ AAG W+ L + + IPVKP KG +L+ E +L +
Sbjct: 231 EGEFHCSTVINAAGAWAAEL-----SQQATGIAIPVKPVKGQILLTERMPALLRGCLTTS 285
Query: 344 AGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIW 403
Y+ D +G+IL +GS+ + GF+ + +
Sbjct: 286 DCYMAQKD---------NGEIL---------------IGSTTEDKGFDVSTTFPEVAGLV 321
Query: 404 KRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLS 463
+ A P+L+ + L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 322 QGAVRCVPQLQGVNL------KRCWAGLRPGSPDELPILGPMAGVEGYLNACGHFRTGIL 375
Query: 464 LALGTAELVADMVLTNPLKVDSAPF 488
+ T ++ +V PL +D PF
Sbjct: 376 TSAITGVMLERLVNEKPLPLDITPF 400
>gi|398789427|ref|ZP_10551271.1| oxidoreductase [Streptomyces auratus AGR0001]
gi|396991463|gb|EJJ02606.1| oxidoreductase [Streptomyces auratus AGR0001]
Length = 384
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 168/387 (43%), Gaps = 43/387 (11%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPL 165
LSV VVD+ G TGAG+G + + + PG E+ LAL S +LW+ LA+ L Q
Sbjct: 30 LSVTVVDRGSVAGGTTGAGEGNLLVSDKEPGPELA-LALLSTELWRDLAELLPPQ----- 83
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA 225
I ++ G L++ + L++ EAG+RAE + L EP L G
Sbjct: 84 --IEYEPKGGLVVASGEAGMRALRDFAAGQEEAGVRAEEIPGDRLQDLEPHLAPGLAGGF 141
Query: 226 AFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT 285
+ + A+ A + G + + VT LL + G V V+T
Sbjct: 142 HYRQDAQVMPALAAAHLLRAGGDQVRLR------LGEEVTGLL-ITADGSVRGVRTVAGE 194
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
+++ +V AAG W G + + +PV PR+G +LV E + + A
Sbjct: 195 VHASY-VVNAAGTWGGEVAR------LAGVGLPVLPRRGFVLVTEPLPRV-VRRKVYAAD 246
Query: 346 YVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWK 404
YV V G L S G +++G+SR+ GF+ ++ R+
Sbjct: 247 YVA---------DVASGSAALQTSAVVEGTAAGPVLIGASRERVGFDRTPSTEVLRRLAA 297
Query: 405 RAAEFYPKLRDLCLADFISNRKVRI--GLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGL 462
+A +P L + R +R G RPY+PD P IGP P + + A GHEG G+
Sbjct: 298 QATALFPFLAGV--------RAIRTYAGFRPYLPDHLPAIGPDPRVPGLLHACGHEGAGV 349
Query: 463 SLALGTAELVADMVLTNPLKVDSAPFA 489
LA T L+A + +D +PF+
Sbjct: 350 GLAPATGLLIARALSEGEPPLDMSPFS 376
>gi|421651334|ref|ZP_16091703.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC0162]
gi|425747875|ref|ZP_18865873.1| putative glycine oxidase ThiO [Acinetobacter baumannii WC-348]
gi|408507944|gb|EKK09631.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC0162]
gi|425492914|gb|EKU59166.1| putative glycine oxidase ThiO [Acinetobacter baumannii WC-348]
Length = 371
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 174/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHVV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPITGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ R+
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLIRYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F + PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFENTPVKKLIQQGDA--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
DIPV+P +G +L+ + P ++ M +
Sbjct: 218 DIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|138896857|ref|YP_001127310.1| sarcosine oxidase subunit beta [Geobacillus thermodenitrificans
NG80-2]
gi|134268370|gb|ABO68565.1| Sarcosine oxidase beta subunit [Geobacillus thermodenitrificans
NG80-2]
Length = 357
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 171/389 (43%), Gaps = 86/389 (22%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW--DLALRSNKLWKMLADSLRDQGLDPL 165
+ V+DK P SG +GA Q ++W+ ++TP W + ++ S +L+ L+ + D
Sbjct: 31 ILVIDKKFPMSGTSGATQAWVWVHNKTPA---WYAEFSMYSAELYSYLSKKIGD------ 81
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA----GLRAEYLSSSDLLQAEPEL---M 218
+ +++TG L +P V E+ K+L ++ G++ + LS ++L+ EP + +
Sbjct: 82 --VEYRRTGGL----SPFFTVRDLEKAKRLADSYEKIGIKIKVLSREEVLEKEPFINPKV 135
Query: 219 VGEDSRAAFLPYDSQLDAM-LAVAYI---EKGNRHFASKGRYAEFYHDPVTCLLRSNSTG 274
VG A F D ++ L Y+ +K H+++ R V + + N
Sbjct: 136 VG----ATFSRIDGNVNPFRLIDMYMRAAKKNGVHYSTYNR--------VIDIQKQNG-- 181
Query: 275 EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNS 334
+ V S+ T Y K +++A G WS L + +DIPV +G +LV E
Sbjct: 182 --QFVVISEKTTYVTKNLILAGGPWSRELGR------MVGVDIPVNQVRGQILVSEPLKP 233
Query: 335 LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEV 394
LN+ +G Q N+G++L +G S + AGF+
Sbjct: 234 F-LNYTI--SGL----------RQTNNGEVL---------------IGYSMEQAGFDRST 265
Query: 395 EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLA 454
+I A + P LR + S G+R DG P+IG VP + +++A
Sbjct: 266 TLDVIQETANMAVHYVPSLRKAKIVRTFS------GIRAMPKDGLPIIGRVPDVENLYVA 319
Query: 455 TGHEGLGLSLALGT--AELVADMVLTNPL 481
H G+ LS +GT EL+ D + P+
Sbjct: 320 ATHSGITLSPLIGTIMTELIVDGETSIPI 348
>gi|375133788|ref|YP_004994438.1| putative D-amino acid oxidase [Acinetobacter calcoaceticus PHEA-2]
gi|325121233|gb|ADY80756.1| putative D-amino acid oxidase [Acinetobacter calcoaceticus PHEA-2]
Length = 371
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 173/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V +V++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCNVSIFDQQEAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ R+
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLIRYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H V L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHAAVKKLIQQGDA--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
DIPV+P +G +L+ + P ++ M +
Sbjct: 218 DIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|283782146|ref|YP_003372901.1| glycine oxidase ThiO [Pirellula staleyi DSM 6068]
gi|283440599|gb|ADB19041.1| glycine oxidase ThiO [Pirellula staleyi DSM 6068]
Length = 370
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 182/422 (43%), Gaps = 70/422 (16%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRT----PGSE 138
D ++IG G+IGL+IA + L SV +VD+ A+ AG G + R P +
Sbjct: 3 DCLVIGGGVIGLSIAWE-LARRGQSVQLVDQGKLAREASWAGAGILPPAARPLAIHPYDQ 61
Query: 139 IWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA 198
+ +A ++ W A LR+ G+ G++Q G++ + R+ E+ L + +
Sbjct: 62 LRAMAFEMHREWS--ARLLRETGIHN----GYQQNGAIYLARSAGEVASLVAWSQLASDE 115
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSR----AAFLPYDSQLDAMLAVAYIEKGNRHFASKG 254
++ E L+ + L + EP + S+ FLP + Q+ + RH S
Sbjct: 116 QVQIEKLTPARLREIEPAIAPAPSSKPLRATYFLPEECQI----------RNPRHLQSLI 165
Query: 255 RYAE------FYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLL 308
R + + P+ L GEV A TS+ L +K +A G WSG L+ L
Sbjct: 166 RACQQAGVELIENSPLVDL--QLHGGEVVAAITSQGELRAKN-YCIATGAWSGILLQKL- 221
Query: 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSIS 368
++ V P +G +L+L+ D + VN G
Sbjct: 222 -----GFEVGVLPIRGQMLLLKT-------------------DAPILRTIVNEG---PRY 254
Query: 369 MTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR 428
M D G+L++G++ + GF+ + + + + A E P L A + +
Sbjct: 255 MVPRDD--GHLLIGATEEEVGFDKRNTEEALADLHQFAIELVPSLAS---AQVVQSWA-- 307
Query: 429 IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
GLRP DG P +G +P L+ F+A GH GL L+ TA +++D++ VD +PF
Sbjct: 308 -GLRPASYDGFPYLGKLPNLANAFVAAGHFRSGLYLSPATAMVMSDLISGITPAVDLSPF 366
Query: 489 AV 490
V
Sbjct: 367 CV 368
>gi|338535484|ref|YP_004668818.1| glycine oxidase ThiO [Myxococcus fulvus HW-1]
gi|337261580|gb|AEI67740.1| glycine oxidase ThiO [Myxococcus fulvus HW-1]
Length = 372
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 175/411 (42%), Gaps = 59/411 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI--WMVHRTPGSEIW 140
DVII+G GI+G IA +L + + V V+++ +P + A+ A G + M PG+
Sbjct: 5 DVIIVGGGIMGCGIALRLRQ-AGVRVTVLERSIPGAEASSAAAGMLAPQMESDGPGA-FL 62
Query: 141 DLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
DL LRS L+ A LR+ G+D + ++ G L + L L V G
Sbjct: 63 DLCLRSRGLYPAFAAELRELSGVD----VAYRPCGILKVAFDEAGLHHLDATVAWQRGLG 118
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
LRAE L + EP L + AA P D QLD L V + A+ AEF
Sbjct: 119 LRAELLDGASARALEPRLSA-KAVGAAHFPDDHQLDNRLLVRALT-----MAAARVGAEF 172
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
V + + G V L + A+VVAAG WS +++H E V
Sbjct: 173 RTGHVRGV--AQEGGRAVGVDLDGELLRA-DAVVVAAGSWS-AMVHGAGVEARA-----V 223
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+P +G ++ + L GY + D G +
Sbjct: 224 RPARGQMVQFQTRLPLLERVLVSAKGY----------------------LVPRAD--GRV 259
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
+ GS+ + GF+ +V + RI A E P+L + + + G RP+ D +
Sbjct: 260 IAGSTMEMVGFDKQVTAAGLARILDMALELCPELGPAPVTETWA------GFRPWTEDQR 313
Query: 440 PVI--GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P + GPVPGL FLATGH G+ LA TA+LV VL VD APF
Sbjct: 314 PYLGEGPVPGL---FLATGHFRNGILLAPITAKLVTQAVLGERPTVDLAPF 361
>gi|445408167|ref|ZP_21432569.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-57]
gi|444780770|gb|ELX04698.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-57]
Length = 371
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 174/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPITGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + +A + P +L + ++ +
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SEQFQKAIYFP---ELSNIRNPRVLQSLISYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHTPVKKLIQQGDA--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+IPV+P +G +L+ + P ++ M +
Sbjct: 218 EIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|418327197|ref|ZP_12938365.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU071]
gi|365223204|gb|EHM64496.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU071]
Length = 372
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 190/419 (45%), Gaps = 64/419 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IARQ L + L+VAV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARQ-LSATHLNVAVIDRDVPGKHASYKAGGMLGAQNEFTEDSDLFK 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ +K + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANEHDDISSIKRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS DLLQ L GE A +P+D Q++A +A +E + K R
Sbjct: 118 SVKQLSDDDLLQ----LTHGEVKPSYAAIHIPHDGQINAHHYTLALLE------SIKLRE 167
Query: 257 AEFYHD-PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
+ Y VT + R N +V+T++++ ++VA G WS L+ T+ L
Sbjct: 168 IKRYESTEVTSIERHNG---YYSVKTNQSSTIEAHKVIVAGGAWSSQLL------TQYHL 218
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHA-SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
V KG +++LEN N L L M G + P Q N
Sbjct: 219 QRQVIGVKGEVILLEN-NDLALTETLFMTNG------CYIVPKQPN-------------- 257
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
++G++ +F ++ +D + + A P+L+D + S G+RPY
Sbjct: 258 ---RFLIGATSEFNNYSVGTTDEGMDWLLRHAYHRVPQLKDSHILKKWS------GVRPY 308
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PV+ + +++ +GH G+ L+ +A+ +L+ + F V R
Sbjct: 309 TEKEIPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWILSGIKPSRYSSFTVTRR 365
>gi|291617674|ref|YP_003520416.1| DadA [Pantoea ananatis LMG 20103]
gi|386079184|ref|YP_005992709.1| D-amino acid dehydrogenase small subunit DadA [Pantoea ananatis
PA13]
gi|291152704|gb|ADD77288.1| DadA [Pantoea ananatis LMG 20103]
gi|354988365|gb|AER32489.1| D-amino acid dehydrogenase small subunit DadA [Pantoea ananatis
PA13]
Length = 433
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 84 VIIIGAGIIGLT--------------IARQLLVGSDLSVAVVDKVVPCSGATGAGQG--- 126
V+I+G+G++G+T I RQ + S A ++ P A A G
Sbjct: 3 VVILGSGVVGVTSAWYLARAGHQVTVIDRQPQPAMETSAANAGQISPGYAAPWAAPGVPL 62
Query: 127 --YIWMVHRTPGSEIWDLALRSNK-------LWKML------------------ADSLRD 159
WM R LA+R + +W ML A+ RD
Sbjct: 63 KAMKWMFQRHA-----PLAIRLDGSRFQLEWMWNMLRNCDMRHYQQNKSRMVRLAEYSRD 117
Query: 160 --QGLDPLQVIGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP 215
+ L I + +Q G+L + RT ++ + + L EAG+ E L + L EP
Sbjct: 118 CLKALRAETGIAYEGRQGGTLQLFRTQQQFDSASKDIAVLREAGVPYELLEAHQLASVEP 177
Query: 216 ELMVGEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST 273
L + LP D D L + K A + ++ P+ LLR +
Sbjct: 178 ALAATQHKLTGGLRLPNDETGDCQLFTQRLAK----MAEEAGVVFRFNTPIDQLLRDGN- 232
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
+ V+ + + + VVA G +S SLM + ++DIPV P KG+ L + N
Sbjct: 233 -RIYGVKCGEEVI-KGDSYVVALGSYSTSLMKN-------IVDIPVYPLKGYSLTIPVTN 283
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM-TATTDVIGNLVLGSSRQFAGFNT 392
P IL + A T + +G + GFNT
Sbjct: 284 ----------------------PDAAPVSTILDETYKVAVTRFDNRIRVGGMAEIVGFNT 321
Query: 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVF 452
++ + + + + YP+ D+ A F + GLRP PDG PV+G P LS +F
Sbjct: 322 KLLEARRETLEMVVTDLYPEGGDVSQASFWT------GLRPMTPDGTPVVGATP-LSNLF 374
Query: 453 LATGHEGLGLSLALGTAELVADMV 476
L TGH LG ++A G+ +L+AD++
Sbjct: 375 LNTGHGTLGWTMACGSGQLLADVI 398
>gi|421807735|ref|ZP_16243595.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC035]
gi|410416716|gb|EKP68488.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC035]
Length = 371
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 173/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPITGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ R+
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELANIRNPRVLQSLIRYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H PV L++ ++A+Q ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHTPVKKLIQQGDV--IQALQAEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+IPV+P +G +L+ + P ++ M +
Sbjct: 218 EIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|421661386|ref|ZP_16101562.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC110]
gi|421694915|ref|ZP_16134532.1| putative glycine oxidase ThiO [Acinetobacter baumannii WC-692]
gi|404567150|gb|EKA72278.1| putative glycine oxidase ThiO [Acinetobacter baumannii WC-692]
gi|408715798|gb|EKL60920.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC110]
Length = 371
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 173/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPITGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ +
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLISYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHTPVKKLIQQGDA--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+IPV+P +G +L+ + P ++ M +
Sbjct: 218 EIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P +D+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLDQPTLIDAKAYS 361
>gi|239503159|ref|ZP_04662469.1| Glycine oxidase [Acinetobacter baumannii AB900]
gi|421679721|ref|ZP_16119589.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC111]
gi|410390540|gb|EKP42923.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC111]
Length = 371
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 173/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDIGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ +
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLISYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHTPVKKLIQQGDV--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+IPV+P +G +L+ + P ++ M +
Sbjct: 218 EIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|378767015|ref|YP_005195480.1| D-amino acid dehydrogenase small subunit DadA [Pantoea ananatis LMG
5342]
gi|365186493|emb|CCF09443.1| D-amino acid dehydrogenase small subunit DadA [Pantoea ananatis LMG
5342]
Length = 433
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 84 VIIIGAGIIGLT--------------IARQLLVGSDLSVAVVDKVVPCSGATGAGQG--- 126
V+I+G+G++G+T I RQ + S A ++ P A A G
Sbjct: 3 VVILGSGVVGVTSAWYLARAGHQVTVIDRQPQPAMETSAANAGQISPGYAAPWAAPGVPL 62
Query: 127 --YIWMVHRTPGSEIWDLALRSNK-------LWKML------------------ADSLRD 159
WM R LA+R + +W ML A+ RD
Sbjct: 63 KAMKWMFQRHA-----PLAIRLDGSRFQLEWMWNMLRNCDMRHYQQNKSRMVRLAEYSRD 117
Query: 160 --QGLDPLQVIGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP 215
+ L I + +Q G+L + RT ++ + + L EAG+ E L + L EP
Sbjct: 118 CLKALRAETGIAYEGRQGGTLQLFRTQQQFDSASKDIAVLREAGVPYELLEAHQLASVEP 177
Query: 216 ELMVGEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST 273
L + LP D D L + K A + ++ P+ LLR +
Sbjct: 178 ALAATQHKLTGGLRLPNDETGDCQLFTQRLAK----MAEEAGVVFRFNTPIDQLLRDGN- 232
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
+ V+ + + + VVA G +S SLM + ++DIPV P KG+ L + N
Sbjct: 233 -RIYGVKCGEEVI-KGDSYVVALGSYSTSLMKN-------IVDIPVYPLKGYSLTIPVTN 283
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM-TATTDVIGNLVLGSSRQFAGFNT 392
P IL + A T + +G + GFNT
Sbjct: 284 ----------------------PDAAPVSTILDETYKVAVTRFDNRIRVGGMAEIVGFNT 321
Query: 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVF 452
++ + + + + YP+ D+ A F + GLRP PDG PV+G P LS +F
Sbjct: 322 KLLEARRETLEMVVTDLYPEGGDVSQASFWT------GLRPMTPDGTPVVGATP-LSNLF 374
Query: 453 LATGHEGLGLSLALGTAELVADMV 476
L TGH LG ++A G+ +L+AD++
Sbjct: 375 LNTGHGTLGWTMACGSGQLLADVI 398
>gi|418412272|ref|ZP_12985535.1| glycine oxidase ThiO [Staphylococcus epidermidis BVS058A4]
gi|410887716|gb|EKS35521.1| glycine oxidase ThiO [Staphylococcus epidermidis BVS058A4]
Length = 372
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 192/422 (45%), Gaps = 70/422 (16%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IARQ L + L+VAV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARQ-LSATHLNVAVIDRDVPGKHASYKAGGMLGAQNEFTEDSDLFK 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ +K + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANEHDDISSIKRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS DLLQ L GE A +P+D Q++A +A +E + K R
Sbjct: 118 SVKQLSDDDLLQ----LTHGEVKPSYAAIHIPHDGQINAHHYTLALLE------SIKLRE 167
Query: 257 AEFYHD-PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
+ Y VT + R N +V+T++++ ++VA G WS L+ T+ L
Sbjct: 168 IKRYESTEVTSIERHNG---YYSVKTNQSSTIEAHKVIVAGGAWSSQLL------TQYHL 218
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
V KG +++LEN +DLTL ++ MT +
Sbjct: 219 QRQVIGVKGEVILLEN------------------NDLTLTE---------TLFMTNGCYI 251
Query: 376 I----GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
+ ++G++ +F ++ +D + + A P+L+D + S G+
Sbjct: 252 VPKQPNRFLIGATSEFNNYSVGTTDEGMDWLLRHAYHRVPQLKDSHILKKWS------GV 305
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
RPY PV+ + +++ +GH G+ L+ +A+ +L+ + F V
Sbjct: 306 RPYTEKEIPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWLLSGIKPSRYSSFTVT 363
Query: 492 GR 493
R
Sbjct: 364 RR 365
>gi|410092206|ref|ZP_11288739.1| glycine oxidase ThiO [Pseudomonas viridiflava UASWS0038]
gi|409760448|gb|EKN45594.1| glycine oxidase ThiO [Pseudomonas viridiflava UASWS0038]
Length = 370
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 39/230 (16%)
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
VT +R + +E V+T+ + + + +++AAG WSG L+ L L++PV+P K
Sbjct: 174 VTGFVRRHD--RIEGVKTTSGDVLADR-VILAAGAWSGELLKHL------GLELPVEPVK 224
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
G +++ + + SM +L+ A G++++GS
Sbjct: 225 GQMILYKCASDFL---PSM---------------------VLAKGRYAIPRRDGHILIGS 260
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
+ + AGF+ + ++ + A E P L D A+ ++ GLRP P+G P IG
Sbjct: 261 TLEHAGFDKTTTEVALESLKASAVELIPALAD---AEPVAQWA---GLRPGSPEGIPFIG 314
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PVPG ++L GH GL LA + +L+AD++L + +D AP+A QGR
Sbjct: 315 PVPGFEGLWLNCGHYRNGLVLAPASCQLLADLLLEHEPIIDPAPYAPQGR 364
>gi|385205479|ref|ZP_10032349.1| glycine/D-amino acid oxidase, deaminating [Burkholderia sp. Ch1-1]
gi|385185370|gb|EIF34644.1| glycine/D-amino acid oxidase, deaminating [Burkholderia sp. Ch1-1]
Length = 376
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 142/349 (40%), Gaps = 55/349 (15%)
Query: 146 SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYL 205
S LW LA LR + + + G+L + EE + G+ A+ L
Sbjct: 64 SRDLWLDLAPRLRARD-------AFARCGTLWVAADEEEWQAARAMHAAFEAQGIAAQLL 116
Query: 206 SSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVT 265
S+ L EP L M IE + +A P
Sbjct: 117 DSTALRTCEPALAA----------------PMAGGLRIEHDSIVYAPTVAEWLLTQSPAA 160
Query: 266 CLLRSNSTGEVEAVQTSKNTL-----YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
+R V ++ S TL +VVA G L ++V +P++
Sbjct: 161 ANIRVRLGTTVTSIGASGVTLADGGRVGAAHVVVANG----------LGARQLVPSLPLQ 210
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P+KGHLL+ + + L + H +E GY+ +H S++ A G L+
Sbjct: 211 PKKGHLLITDRYPGL-IRHQLLELGYIK---------SAHHAAGTSVAFNAQPRPTGQLL 260
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GSSRQF + V+ ++ ++ +RAA + P L L + + G R PDG P
Sbjct: 261 IGSSRQFDSTDPAVDLPVLAQMLQRAARYLPALPTL------NGIRAWTGFRAATPDGLP 314
Query: 441 VIGPVPGLSK-VFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+IG + V+LA GHEGLG++ +L TA+L+A ++ + P+
Sbjct: 315 LIGAAGDFAPGVWLAVGHEGLGVTTSLATAKLLAAQIVAGVAPIPVEPY 363
>gi|424060850|ref|ZP_17798341.1| glycine oxidase ThiO [Acinetobacter baumannii Ab33333]
gi|445491439|ref|ZP_21459754.1| putative glycine oxidase ThiO [Acinetobacter baumannii AA-014]
gi|404668802|gb|EKB36711.1| glycine oxidase ThiO [Acinetobacter baumannii Ab33333]
gi|444764573|gb|ELW88886.1| putative glycine oxidase ThiO [Acinetobacter baumannii AA-014]
Length = 371
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 173/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPITGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + E + A Y +L + ++ +
Sbjct: 110 QEPMQRCEYLQRDALEQVNPH--ISEQFQEAI--YFPELSNIRNPRVLQSLISYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F + PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFENTPVKKLIQQGDA--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
DIPV+P +G +L+ + P ++ M +
Sbjct: 218 DIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|386016033|ref|YP_005934318.1| D-amino acid dehydrogenase small subunit DadA [Pantoea ananatis
AJ13355]
gi|327394100|dbj|BAK11522.1| D-amino acid dehydrogenase small subunit DadA [Pantoea ananatis
AJ13355]
Length = 433
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 177/444 (39%), Gaps = 99/444 (22%)
Query: 84 VIIIGAGIIGLT--------------IARQLLVGSDLSVAVVDKVVPCSGATGAGQG--- 126
V+I+G+G++G+T I RQ + S A ++ P A A G
Sbjct: 3 VVILGSGVVGVTSAWYLARAGHQVTVIDRQPQPAMETSAANAGQISPGYAAPWAAPGVPL 62
Query: 127 --YIWMVHRTPGSEIWDLALRSNK-------LWKML------------------ADSLRD 159
WM R LA+R + +W ML A+ RD
Sbjct: 63 KAMKWMFQRHA-----PLAIRLDGSRFQLEWMWNMLRNCDMRHYQQNKSRMVRLAEYSRD 117
Query: 160 --QGLDPLQVIGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP 215
+ L I + +Q G+L + RT ++ + + L EAG+ E L + L EP
Sbjct: 118 CLKALRAETGIAYEGRQGGTLQLFRTQQQFDSASKDIAVLREAGVPYELLEAHQLASVEP 177
Query: 216 ELMVGEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST 273
L + LP D D L + K A + ++ P+ LLR +
Sbjct: 178 ALAATQHKLTGGLRLPNDETGDCQLFTQRLAK----MAEEAGVVFRFNTPIDQLLRDGN- 232
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
+ V+ + + + VVA G +S SLM + ++DIPV P KG+ L + N
Sbjct: 233 -RIYGVKCGEEVI-KGDSYVVALGSYSTSLMKN-------IVDIPVYPLKGYSLTIPVTN 283
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM-TATTDVIGNLVLGSSRQFAGFNT 392
P IL + A T + +G + GFNT
Sbjct: 284 ----------------------PDAAPVSTILDETYKVAVTRFDNRIRVGGMAEIVGFNT 321
Query: 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVF 452
++ + + + + YP+ D+ A F + GLRP PDG PV+G P LS +F
Sbjct: 322 KLLEARRETLEMVVTDLYPEGGDVGQASFWT------GLRPMTPDGTPVVGATP-LSNLF 374
Query: 453 LATGHEGLGLSLALGTAELVADMV 476
L TGH LG ++A G+ +L+AD++
Sbjct: 375 LNTGHGTLGWTMACGSGQLLADVI 398
>gi|254240617|ref|ZP_04933939.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa 2192]
gi|355649446|ref|ZP_09055739.1| hypothetical protein HMPREF1030_04825 [Pseudomonas sp. 2_1_26]
gi|421167936|ref|ZP_15626066.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa ATCC 700888]
gi|421180703|ref|ZP_15638249.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa E2]
gi|424941426|ref|ZP_18357189.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa NCMG1179]
gi|126193995|gb|EAZ58058.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa 2192]
gi|346057872|dbj|GAA17755.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa NCMG1179]
gi|354827162|gb|EHF11348.1| hypothetical protein HMPREF1030_04825 [Pseudomonas sp. 2_1_26]
gi|404532386|gb|EKA42278.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa ATCC 700888]
gi|404545004|gb|EKA54118.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa E2]
Length = 417
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 178/451 (39%), Gaps = 97/451 (21%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG---- 136
T+D++I G G+IG + A QL +L +AVVD P AT A G +W + + G
Sbjct: 4 TYDIVIAGGGVIGASCAYQLSRRGNLRIAVVDDKRP-GNATRASAGGLWAIGESVGLGCG 62
Query: 137 -------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDP 164
+DLAL+SN L+ L L ++ G+D
Sbjct: 63 VIFFRMMSSRNRREAQGAAVAVDASTPHILPPAFFDLALQSNALYPELHRELIERHGMD- 121
Query: 165 LQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSR 224
+++TG + + E+ + V Q+ + +L +L +AEP +
Sbjct: 122 ---FKFERTGLKYVIQDDEDRQYAEHIVAQIPHLAEQVRWLDREELRRAEPAVSHAAHGA 178
Query: 225 AAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTG------EVE 277
FL D Q+ LA AY+E + + V LL +N TG +
Sbjct: 179 LEFL-CDHQVSPFRLADAYLEAARQ-------------NGVELLLGTNVTGVLRQGRRIS 224
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
V+T + + ++ AAG W+ L E IPVKP KG +++ E L
Sbjct: 225 GVRTDNAGVLHCRTLINAAGAWAAE-----LSEMATGRRIPVKPVKGQIVLTERMPRLLN 279
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
+ Y+ D +G+IL +GS+ + GF+
Sbjct: 280 GCLTTSDCYMAQKD---------NGEIL---------------IGSTTEDKGFDVSNTFP 315
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
I + + A P+L+ + L ++ GLRP PD P++GPV + A GH
Sbjct: 316 EIAGLVQGAVRCVPELQQVNL------KRTWAGLRPGSPDELPILGPVAEVEGYLNACGH 369
Query: 458 EGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G+ + T L+ +V L +D APF
Sbjct: 370 FRTGILTSAITGVLLDRLVHEETLPLDIAPF 400
>gi|251811819|ref|ZP_04826292.1| glycine oxidase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875107|ref|ZP_06283980.1| putative glycine oxidase ThiO [Staphylococcus epidermidis SK135]
gi|417914408|ref|ZP_12558052.1| putative glycine oxidase ThiO [Staphylococcus epidermidis VCU109]
gi|420173032|ref|ZP_14679528.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM067]
gi|420197923|ref|ZP_14703643.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM020]
gi|420228127|ref|ZP_14732881.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIH05003]
gi|421608190|ref|ZP_16049417.1| glycine oxidase [Staphylococcus epidermidis AU12-03]
gi|251804616|gb|EES57273.1| glycine oxidase [Staphylococcus epidermidis BCM-HMP0060]
gi|281295872|gb|EFA88393.1| putative glycine oxidase ThiO [Staphylococcus epidermidis SK135]
gi|341651964|gb|EGS75754.1| putative glycine oxidase ThiO [Staphylococcus epidermidis VCU109]
gi|394240866|gb|EJD86288.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM067]
gi|394265270|gb|EJE09930.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM020]
gi|394295101|gb|EJE38756.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIH05003]
gi|406656188|gb|EKC82600.1| glycine oxidase [Staphylococcus epidermidis AU12-03]
Length = 372
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 189/419 (45%), Gaps = 64/419 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IAR L + L VAV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARH-LSATHLDVAVIDRDVPGKHASYKAGGMLGAQNEFTEDSDLFQ 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ +K + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANEHDDISSIKRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS DLLQ L GE A +P+D Q++A +A +E + K R
Sbjct: 118 SVKQLSDDDLLQ----LTHGEVKPSYAAIHIPHDGQINAHHYTLALVE------SMKLRE 167
Query: 257 AEFYHD-PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
+ Y VT + R N V+ Q+S T+ + K I+VA G WS L+ T+ L
Sbjct: 168 IKRYESTEVTSIERHNGYYSVKTDQSS--TIEAHK-IIVAGGAWSSQLL------TQYHL 218
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHA-SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
V KG +++LEN N L L M G + P Q N
Sbjct: 219 QRQVIGVKGEVILLEN-NDLSLTETLFMTNG------CYIVPKQPN-------------- 257
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
++G++ +F ++ +D + + A P+L+D + K G+RPY
Sbjct: 258 ---RFLIGATSEFNNYSVGTTDEGMDWLLRHAYHRVPQLKDSHIL------KKWSGVRPY 308
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PV+ + +++ +GH G+ L+ +A+ +L+ + F V R
Sbjct: 309 TEKEMPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWLLSGIKPSRYSSFTVTRR 365
>gi|339629866|ref|YP_004721509.1| glycine oxidase [Sulfobacillus acidophilus TPY]
gi|379007023|ref|YP_005256474.1| glycine oxidase [Sulfobacillus acidophilus DSM 10332]
gi|339287655|gb|AEJ41766.1| glycine oxidase [Sulfobacillus acidophilus TPY]
gi|361053285|gb|AEW04802.1| glycine oxidase [Sulfobacillus acidophilus DSM 10332]
Length = 375
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 167/399 (41%), Gaps = 69/399 (17%)
Query: 101 LVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160
L + VA+V+ P AT A G + +P +E A ++ LW ++ +SLR
Sbjct: 21 LATAGFRVALVEAGEPGGQATRAAAGIL-----SPAAE----AAVTSPLWPLMRESLR-- 69
Query: 161 GLDPLQVIGWKQTGSL---------LIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLL 211
L P V +Q + LI + L R + L AG+ AE+ S + +
Sbjct: 70 -LYPEWVTRVEQHSGIRPELFLDGVLITALESDAADLARRQEVLRAAGVAAEWWSPTVVA 128
Query: 212 QAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSN 271
P L A ++P + Q++A + + RHF + +F+ +PV + ++
Sbjct: 129 DHIPGL-APLHPLALWIPGEGQIEAPRWLRALTDAARHFHAD----QFWGEPVVQWV-TD 182
Query: 272 STGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLEN 331
+TG V+T + TLY ++ ++VA G W+ L L VKP +G + L
Sbjct: 183 ATGRWIGVKTPRQTLYGER-MIVATGAWTYQLWSPGLV---------VKPIRGQVAALRT 232
Query: 332 FNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFN 391
+ E + GH L G L++G++ AG++
Sbjct: 233 ATRW-----TPEVVFFGHGYLV-------------------PKADGRLIIGATEDDAGYD 268
Query: 392 TEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKV 451
T V I ++ A F A I + GLRP PDG P++GPVPG +
Sbjct: 269 TRVTLEGIQQLGDIARRFR------IDASHIYWERSWAGLRPATPDGLPILGPVPGHDEA 322
Query: 452 FLATGHEGLGLSLALGTAELVADMVLTN--PLKVDSAPF 488
FLATGH G+ LA T EL A V + VD PF
Sbjct: 323 FLATGHYRNGILLAPVTGELAALWVEGHWSEAAVDIRPF 361
>gi|402701708|ref|ZP_10849687.1| hydrogen cyanide synthase HcnC [Pseudomonas fragi A22]
Length = 418
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 183/446 (41%), Gaps = 87/446 (19%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG---- 136
T+DV+I G G+IG + A L DL VA++D P A+ A G +W + + G
Sbjct: 4 TYDVVIAGGGVIGASCAYHLSRRKDLKVAMIDCKRP-GNASRASAGGLWAIGESVGLGCG 62
Query: 137 -------------------------------SEIWDLALRSNKLWKML-ADSLRDQGLDP 164
+D AL+SN L+ L + + G+D
Sbjct: 63 VIFFRMMSAERKREAQGTAVIVDSSTPHILPECFFDFALQSNALYPGLHQEMIEKHGMD- 121
Query: 165 LQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSR 224
+++TG + E+ + + V + +L + L ++EP V D+
Sbjct: 122 ---FKFERTGLKYVIYDDEDRLYAEHIVANIPHLSDEVRWLDQAALRESEPS--VSHDAL 176
Query: 225 AAF-LPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS 282
A D Q+ L AY E A + +++ VT +LR S +V V+T
Sbjct: 177 GALEFLCDHQVSPFRLTDAYTEG-----ARQNGVDLYFNSNVTEVLRQGS--KVVGVRTD 229
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
+ K ++ AAG W+ L + T+ L IPV P KG +++ E L LN
Sbjct: 230 NQGAFHCKTLINAAGAWAAELS---VMATD--LSIPVAPVKGQIVLTERMPKL-LN---- 279
Query: 343 EAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRI 402
G + D L Q ++G+IL +GS+ + GF+ I +
Sbjct: 280 --GCLTTSDCYL--AQKDNGEIL---------------IGSTTEDKGFDVSTTFPEITGL 320
Query: 403 WKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGL 462
+ A P+L+D+ L ++ GLRP PD P++GP+ G+ A GH G+
Sbjct: 321 VQGAMRCIPELKDVNL------KRTWAGLRPGSPDELPILGPMAGVEGYLNACGHFRTGI 374
Query: 463 SLALGTAELVADMVLTNPLKVDSAPF 488
+ T ++ +V PL +D PF
Sbjct: 375 LTSAITGVMLDALVRDQPLPLDVTPF 400
>gi|116050128|ref|YP_791055.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa UCBPP-PA14]
gi|115585349|gb|ABJ11364.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa UCBPP-PA14]
Length = 417
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 178/451 (39%), Gaps = 97/451 (21%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG---- 136
T+D++I G G+IG + A QL +L +AVVD P AT A G +W + + G
Sbjct: 4 TYDIVIAGGGVIGASCAYQLSRRGNLRIAVVDDKRP-GNATRASAGGLWAIGESVGLGCG 62
Query: 137 -------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDP 164
+DLAL+SN L+ L L ++ G+D
Sbjct: 63 VIFFRMMSSRNRREAQGAAVAVDASTPHILPPAFFDLALQSNALYPELHRELIERHGMD- 121
Query: 165 LQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSR 224
+++TG + + E+ + V Q+ + +L +L +AEP +
Sbjct: 122 ---FKFERTGLKYVIQDDEDRQYAEHIVAQIPHLAEQVRWLDREELRRAEPAVSHAAHGA 178
Query: 225 AAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTG------EVE 277
FL D Q+ LA AY+E + + V LL +N TG +
Sbjct: 179 LEFL-CDHQVSPFRLADAYLEAARQ-------------NGVELLLGTNVTGVLRQGRRIS 224
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
V+T + + ++ AAG W+ L E IPVKP KG +++ E L
Sbjct: 225 GVRTDNAGVLHCRTLINAAGAWAAE-----LSELATGRRIPVKPVKGQIVLTERMPRLLN 279
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
+ Y+ D +G+IL +GS+ + GF+
Sbjct: 280 GCLTTSDCYMAQKD---------NGEIL---------------IGSTTEDKGFDVSNTFP 315
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
I + + A P+L+ + L ++ GLRP PD P++GPV + A GH
Sbjct: 316 EIAGLVQGAVRCVPELQQVNL------KRTWAGLRPGSPDELPILGPVAEVEGYLNACGH 369
Query: 458 EGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G+ + T L+ +V L +D APF
Sbjct: 370 FRTGILTSAVTGVLLDRLVHEETLPLDIAPF 400
>gi|421656642|ref|ZP_16096947.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-72]
gi|408504969|gb|EKK06699.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-72]
Length = 371
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 174/416 (41%), Gaps = 67/416 (16%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQL-DAMLAVAYIEKGNRHFASKG 254
E R EYL L Q P + + A + P S + + + + I +H
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFPELSNIRNPRVLQSLISYLKQH----- 163
Query: 255 RYAEFYHD-PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
EF+ + PV L++ ++A+QT ++ V+ +G WS +++
Sbjct: 164 PNVEFFENTPVKKLIQQGDA--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQL 215
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
LDIPV+P +G +L+ + P ++ M
Sbjct: 216 QLDIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIP 251
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
+ G++V GSS GF+T ++T I + E P+L D + + GLRP
Sbjct: 252 RMDGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPELADFPIV------QRWAGLRP 305
Query: 434 YMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 306 SSPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLDQPTLVDAKAYS 361
>gi|443468573|ref|ZP_21058780.1| Glycine oxidase ThiO [Pseudomonas pseudoalcaligenes KF707]
gi|442897792|gb|ELS24609.1| Glycine oxidase ThiO [Pseudomonas pseudoalcaligenes KF707]
Length = 369
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 43/225 (19%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVL---E 330
G V+ V+T++ + + + +V+AAG WSG L+ L L +PV+P KG +++ E
Sbjct: 185 GRVQGVETARGDVLADR-VVLAAGAWSGDLLAGL------GLSLPVEPVKGQMILFKCAE 237
Query: 331 NFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGF 390
+F +L+ A G++++GS+ + AGF
Sbjct: 238 DFLP---------------------------AMVLAKGRYAIPRRDGHILVGSTLEHAGF 270
Query: 391 NTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSK 450
+ ++ + A E P LRD A+ + + GLRP P+G P IGPVPGL
Sbjct: 271 DKTPTAEALESLKASAFELLPALRD---AELVGHWA---GLRPGSPEGIPFIGPVPGLEG 324
Query: 451 VFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGRCC 495
++L GH GL LA + L+AD++L +D AP+A GR
Sbjct: 325 LWLNCGHYRNGLVLAPASCRLLADLMLGREPIIDPAPYAPPGRAV 369
>gi|76818287|ref|YP_337045.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 1710b]
gi|126455836|ref|YP_001074517.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 1106a]
gi|226194565|ref|ZP_03790162.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei Pakistan 9]
gi|242313080|ref|ZP_04812097.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 1106b]
gi|254189352|ref|ZP_04895862.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei Pasteur
52237]
gi|254262748|ref|ZP_04953613.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 1710a]
gi|403521743|ref|YP_006657312.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei BPC006]
gi|76582760|gb|ABA52234.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 1710b]
gi|126229604|gb|ABN93017.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 1106a]
gi|157937030|gb|EDO92700.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei Pasteur
52237]
gi|225933393|gb|EEH29383.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei Pakistan 9]
gi|242136319|gb|EES22722.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 1106b]
gi|254213750|gb|EET03135.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 1710a]
gi|403076810|gb|AFR18389.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei BPC006]
Length = 377
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+V ++P++P+KGHLL+ + + + +++H +E GY + S++
Sbjct: 200 LVPELPLRPKKGHLLITDRYPA-RVSHQLVELGYAA---------SAHASDGTSVAFNVQ 249
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G L++GSSRQF + VE ++ R+ +RA + P L L + + G R
Sbjct: 250 PRPTGQLLIGSSRQFDTEDPRVEAPVLARMLRRALGYLPALAGL------NGIRAWTGFR 303
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P++G P V+LA GHEGLG++ A G+A ++A ++ +D+ P+
Sbjct: 304 AASPDGLPLLGEHPSRRGVWLALGHEGLGVTTAPGSARVLAALMFGERAAIDAEPY 359
>gi|53721368|ref|YP_110353.1| oxidase [Burkholderia pseudomallei K96243]
gi|126443426|ref|YP_001061577.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 668]
gi|167921627|ref|ZP_02508718.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei BCC215]
gi|217422842|ref|ZP_03454344.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 576]
gi|237508796|ref|ZP_04521511.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei MSHR346]
gi|254195434|ref|ZP_04901862.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei S13]
gi|254299403|ref|ZP_04966852.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 406e]
gi|418558541|ref|ZP_13123097.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 354e]
gi|52211782|emb|CAH37781.1| putative oxidase [Burkholderia pseudomallei K96243]
gi|126222917|gb|ABN86422.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 668]
gi|157809665|gb|EDO86835.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 406e]
gi|169652181|gb|EDS84874.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei S13]
gi|217393750|gb|EEC33770.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 576]
gi|235001001|gb|EEP50425.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei MSHR346]
gi|385362664|gb|EIF68472.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 354e]
Length = 377
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+V ++P++P+KGHLL+ + + + +++H +E GY + S++
Sbjct: 200 LVPELPLRPKKGHLLITDRYPA-RVSHQLVELGYAA---------SAHASDGTSVAFNVQ 249
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G L++GSSRQF + VE ++ R+ +RA + P L L + + G R
Sbjct: 250 PRPTGQLLIGSSRQFDTEDPRVEAPVLARMLRRALGYLPALAGL------NGIRAWTGFR 303
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P++G P V+LA GHEGLG++ A G+A ++A ++ +D+ P+
Sbjct: 304 AASPDGLPLLGEHPSRRGVWLALGHEGLGVTTAPGSARVLAALMFGERAAIDAEPY 359
>gi|417646695|ref|ZP_12296549.1| putative glycine oxidase ThiO [Staphylococcus epidermidis VCU144]
gi|417657138|ref|ZP_12306808.1| putative glycine oxidase ThiO [Staphylococcus epidermidis VCU028]
gi|418630109|ref|ZP_13192597.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU127]
gi|418665719|ref|ZP_13227160.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU081]
gi|420170521|ref|ZP_14677081.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM070]
gi|420210090|ref|ZP_14715522.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM003]
gi|420235316|ref|ZP_14739863.1| putative glycine oxidase ThiO [Staphylococcus epidermidis
NIH051475]
gi|329726490|gb|EGG62953.1| putative glycine oxidase ThiO [Staphylococcus epidermidis VCU144]
gi|329734949|gb|EGG71246.1| putative glycine oxidase ThiO [Staphylococcus epidermidis VCU028]
gi|374408255|gb|EHQ79088.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU081]
gi|374831791|gb|EHR95517.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU127]
gi|394240055|gb|EJD85484.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM070]
gi|394277222|gb|EJE21549.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM003]
gi|394303362|gb|EJE46785.1| putative glycine oxidase ThiO [Staphylococcus epidermidis
NIH051475]
Length = 372
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 189/419 (45%), Gaps = 64/419 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IAR L + L VAV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARH-LSATHLDVAVIDRDVPGKHASYKAGGMLGAQNEFTEDSDLFQ 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ +K + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANEHDDISSIKRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS DLLQ L GE A +P+D Q++A +A +E + K R
Sbjct: 118 SVKQLSDDDLLQ----LTHGEVKPSYAAIHIPHDGQINAHHYTLALLE------SMKLRE 167
Query: 257 AEFYHD-PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
+ Y VT + R N V+ Q+S T+ + K I+VA G WS L+ T+ L
Sbjct: 168 IKRYESTEVTSIERHNGYYSVKTDQSS--TIEAHK-IIVAGGAWSSQLL------TQYHL 218
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHA-SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
V KG +++LEN N L L M G + P Q N
Sbjct: 219 QRQVIGVKGEVILLEN-NDLSLTETLFMTNG------CYIVPKQPN-------------- 257
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
++G++ +F ++ +D + + A P+L+D + K G+RPY
Sbjct: 258 ---RFLIGATSEFNNYSVGTTDEGMDWLLRHAYHRVPQLKDSHIL------KKWSGVRPY 308
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PV+ + +++ +GH G+ L+ +A+ +L+ + F V R
Sbjct: 309 TEKEMPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWLLSGIKPSRYSSFTVTRR 365
>gi|288941322|ref|YP_003443562.1| FAD dependent oxidoreductase [Allochromatium vinosum DSM 180]
gi|288896694|gb|ADC62530.1| FAD dependent oxidoreductase [Allochromatium vinosum DSM 180]
Length = 376
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 169/413 (40%), Gaps = 63/413 (15%)
Query: 83 DVIIIGAGIIGLTIARQL-LVGSDLSVAVVDKVVPCSGATGAG---QGYIWMVHRTPGSE 138
DV++IG GIIGL AR+L L G+++++ + + S G G Y W V
Sbjct: 3 DVLVIGGGIIGLLTARELRLSGAEVTLIEMGETGRESSWAGGGIVSPLYPWRVP----EP 58
Query: 139 IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCE 197
I L+ S L+ L + L D+ G+DP I G + L +
Sbjct: 59 ITALSRWSQGLYPTLTNQLLDETGIDPEFTIN---------GLLVLDDEDLDLALDWGAR 109
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
G E L EPEL +RA LP +QL + K R K R
Sbjct: 110 HGQPIEILQEPGPHALEPELGP-RPARALHLPGIAQLRP----PRLSKAVRRALEK-RID 163
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
+ V LL G V V+T K + +K+ IV+ AG W+ L+ L +I
Sbjct: 164 LREREEVCELLVEQ--GRVRGVRTPKGQVEAKR-IVICAGAWTAKLLEQLGTPPDI---- 216
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
+P +G +L+ HA PGQ+NH L A G
Sbjct: 217 --QPVRGQMLLF---------HAK--------------PGQINH-ITLHAGRYAIPRRDG 250
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
++ GS+ + AGF + ++ A + +P LR + D S GLRP P
Sbjct: 251 RVLFGSTLEHAGFVKRTTAEDKEALYHDAIDLFPVLRRTPIEDHWS------GLRPGSPS 304
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
G P IG PG+ ++ GH GL + +A L+ D++L +D AP+A+
Sbjct: 305 GIPYIGAYPGIEGLYFNAGHFRNGLVMGPASARLMVDLMLDREPILDPAPYAL 357
>gi|126445605|ref|YP_001078081.1| oxidoreductase, FAD-binding family protein [Burkholderia mallei
NCTC 10247]
gi|126238459|gb|ABO01571.1| oxidoreductase, FAD-binding family protein [Burkholderia mallei
NCTC 10247]
Length = 383
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+V ++P++P+KGHLL+ + + + +++H +E GY + S++
Sbjct: 206 LVPELPLRPKKGHLLITDRYPA-RVSHQLVELGYAA---------SAHASDGTSVAFNVQ 255
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G L++GSSRQF + VE ++ R+ +RA + P L L + + G R
Sbjct: 256 PRPTGQLLIGSSRQFDTEDPRVEAPVLARMLRRALGYLPALAGL------NGIRAWTGFR 309
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P++G P V+LA GHEGLG++ A G+A ++A ++ +D+ P+
Sbjct: 310 AASPDGLPLLGEHPSRRGVWLALGHEGLGVTTAPGSARVLAALMFGERAAIDAEPY 365
>gi|53716972|ref|YP_106024.1| oxidoreductase, FAD-binding family protein [Burkholderia mallei
ATCC 23344]
gi|67643347|ref|ZP_00442094.1| oxidoreductase, FAD-binding family protein [Burkholderia mallei GB8
horse 4]
gi|124382799|ref|YP_001025989.1| oxidoreductase, FAD-binding family protein [Burkholderia mallei
NCTC 10229]
gi|167004230|ref|ZP_02269995.1| oxidoreductase, FAD-binding family protein [Burkholderia mallei
PRL-20]
gi|254176484|ref|ZP_04883142.1| oxidoreductase, FAD-binding family protein [Burkholderia mallei
ATCC 10399]
gi|254204843|ref|ZP_04911196.1| oxidoreductase, FAD-binding family protein [Burkholderia mallei
JHU]
gi|254358954|ref|ZP_04975226.1| oxidoreductase, FAD-binding family protein [Burkholderia mallei
2002721280]
gi|52422942|gb|AAU46512.1| oxidoreductase, FAD-binding family protein [Burkholderia mallei
ATCC 23344]
gi|147754429|gb|EDK61493.1| oxidoreductase, FAD-binding family protein [Burkholderia mallei
JHU]
gi|148028141|gb|EDK86101.1| oxidoreductase, FAD-binding family protein [Burkholderia mallei
2002721280]
gi|160697526|gb|EDP87496.1| oxidoreductase, FAD-binding family protein [Burkholderia mallei
ATCC 10399]
gi|238524675|gb|EEP88107.1| oxidoreductase, FAD-binding family protein [Burkholderia mallei GB8
horse 4]
gi|243060391|gb|EES42577.1| oxidoreductase, FAD-binding family protein [Burkholderia mallei
PRL-20]
gi|261826984|gb|ABM98961.2| oxidoreductase, FAD-binding family [Burkholderia mallei NCTC 10229]
Length = 380
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+V ++P++P+KGHLL+ + + + +++H +E GY + S++
Sbjct: 203 LVPELPLRPKKGHLLITDRYPA-RVSHQLVELGYAA---------SAHASDGTSVAFNVQ 252
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G L++GSSRQF + VE ++ R+ +RA + P L L + + G R
Sbjct: 253 PRPTGQLLIGSSRQFDTEDPRVEAPVLARMLRRALGYLPALAGL------NGIRAWTGFR 306
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P++G P V+LA GHEGLG++ A G+A ++A ++ +D+ P+
Sbjct: 307 AASPDGLPLLGEHPSRRGVWLALGHEGLGVTTAPGSARVLAALMFGERAAIDAEPY 362
>gi|169796914|ref|YP_001714707.1| D-amino acid oxidase [Acinetobacter baumannii AYE]
gi|213156682|ref|YP_002318344.1| FAD dependent oxidoreductase [Acinetobacter baumannii AB0057]
gi|215484377|ref|YP_002326608.1| glycine oxidase [Acinetobacter baumannii AB307-0294]
gi|301346250|ref|ZP_07226991.1| Glycine oxidase [Acinetobacter baumannii AB056]
gi|301511019|ref|ZP_07236256.1| Glycine oxidase [Acinetobacter baumannii AB058]
gi|301597414|ref|ZP_07242422.1| Glycine oxidase [Acinetobacter baumannii AB059]
gi|332852693|ref|ZP_08434327.1| FAD dependent oxidoreductase [Acinetobacter baumannii 6013150]
gi|332871104|ref|ZP_08439717.1| FAD dependent oxidoreductase [Acinetobacter baumannii 6013113]
gi|417574021|ref|ZP_12224875.1| putative glycine oxidase ThiO [Acinetobacter baumannii Canada BC-5]
gi|421619948|ref|ZP_16060894.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC074]
gi|421643625|ref|ZP_16084119.1| putative glycine oxidase ThiO [Acinetobacter baumannii IS-235]
gi|421646306|ref|ZP_16086758.1| putative glycine oxidase ThiO [Acinetobacter baumannii IS-251]
gi|421658752|ref|ZP_16098983.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-83]
gi|421700266|ref|ZP_16139783.1| putative glycine oxidase ThiO [Acinetobacter baumannii IS-58]
gi|421798123|ref|ZP_16234153.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-21]
gi|421801740|ref|ZP_16237697.1| putative glycine oxidase ThiO [Acinetobacter baumannii Canada BC1]
gi|445466271|ref|ZP_21450250.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC338]
gi|169149841|emb|CAM87732.1| putative D-amino acid oxidase [Acinetobacter baumannii AYE]
gi|213055842|gb|ACJ40744.1| FAD dependent oxidoreductase [Acinetobacter baumannii AB0057]
gi|213988175|gb|ACJ58474.1| Glycine oxidase [Acinetobacter baumannii AB307-0294]
gi|332729046|gb|EGJ60394.1| FAD dependent oxidoreductase [Acinetobacter baumannii 6013150]
gi|332731864|gb|EGJ63144.1| FAD dependent oxidoreductase [Acinetobacter baumannii 6013113]
gi|400209589|gb|EJO40559.1| putative glycine oxidase ThiO [Acinetobacter baumannii Canada BC-5]
gi|404570648|gb|EKA75721.1| putative glycine oxidase ThiO [Acinetobacter baumannii IS-58]
gi|408508308|gb|EKK09994.1| putative glycine oxidase ThiO [Acinetobacter baumannii IS-235]
gi|408517693|gb|EKK19231.1| putative glycine oxidase ThiO [Acinetobacter baumannii IS-251]
gi|408701666|gb|EKL47089.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC074]
gi|408709448|gb|EKL54694.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-83]
gi|410395296|gb|EKP47603.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-21]
gi|410404997|gb|EKP57050.1| putative glycine oxidase ThiO [Acinetobacter baumannii Canada BC1]
gi|444778082|gb|ELX02101.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC338]
Length = 371
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 177/417 (42%), Gaps = 69/417 (16%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQL-DAMLAVAYIEKGNRHFASKG 254
E R EYL L Q P + + A + P S + + + + I +H
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFPELSNIRNPRVLQSLISYLKQH----- 163
Query: 255 RYAEFYHD-PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
EF+ + PV L++ ++A+QT ++ V+ +G WS +++
Sbjct: 164 PNVEFFENTPVKKLIQKGDA--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQL 215
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
LDIPV+P +G +L+ + P ++ M
Sbjct: 216 QLDIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIP 251
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLR 432
+ G++V GSS GF+T ++T I + E P+L ADF I +R GLR
Sbjct: 252 RMDGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLR 304
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 305 PSSPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|420185665|ref|ZP_14691743.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM040]
gi|394253345|gb|EJD98354.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM040]
Length = 372
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 186/404 (46%), Gaps = 64/404 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IARQ L + L+VAV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARQ-LSATHLNVAVIDRDVPGKHASYKAGGMLGAQNEFTEDSDLFK 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ +K + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANEHDDISSIKRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS DLLQ L GE A +P+D Q++A +A +E + K R
Sbjct: 118 SVKQLSDDDLLQ----LTHGEVKPSYAAIHIPHDGQINAHHYTLALLE------SIKLRE 167
Query: 257 AEFYHD-PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
+ Y VT + R N +V+T++++ ++VA G WS L+ T+ L
Sbjct: 168 IKRYESTEVTSIERHNG---YYSVKTNQSSTIEAHKVIVAGGAWSSQLL------TQYHL 218
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHA-SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
V KG +++LEN N L L M G + P Q N
Sbjct: 219 QRQVIGVKGEVILLEN-NDLALTETLFMTNG------CYIVPKQPN-------------- 257
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
++G++ +F ++ +D + + A P+L+D + S G+RPY
Sbjct: 258 ---RFLIGATSEFNNYSVGTTDEGMDWLLRHAYHRVPQLKDSHILKKWS------GVRPY 308
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLT 478
PV+ + +++ +GH G+ L+ +A+ +L+
Sbjct: 309 TEKEIPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWLLS 350
>gi|184157176|ref|YP_001845515.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ACICU]
gi|332874178|ref|ZP_08442101.1| FAD dependent oxidoreductase [Acinetobacter baumannii 6014059]
gi|384130853|ref|YP_005513465.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
1656-2]
gi|384142143|ref|YP_005524853.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
MDR-ZJ06]
gi|385236442|ref|YP_005797781.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
TCDC-AB0715]
gi|387124910|ref|YP_006290792.1| glycine/D-amino acid oxidase, deaminating [Acinetobacter baumannii
MDR-TJ]
gi|407931781|ref|YP_006847424.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
TYTH-1]
gi|416146286|ref|ZP_11601060.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
AB210]
gi|417571323|ref|ZP_12222180.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC189]
gi|417576865|ref|ZP_12227710.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-17]
gi|417871847|ref|ZP_12516771.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ABNIH1]
gi|417872577|ref|ZP_12517475.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ABNIH2]
gi|417876982|ref|ZP_12521724.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ABNIH3]
gi|417883056|ref|ZP_12527324.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ABNIH4]
gi|421202183|ref|ZP_15659334.1| glycine/D-amino acid oxidase [Acinetobacter baumannii AC12]
gi|421535711|ref|ZP_15981970.1| glycine/D-amino acid oxidase [Acinetobacter baumannii AC30]
gi|421631170|ref|ZP_16071859.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC180]
gi|421689208|ref|ZP_16128892.1| putative glycine oxidase ThiO [Acinetobacter baumannii IS-143]
gi|421702522|ref|ZP_16142002.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
ZWS1122]
gi|421706333|ref|ZP_16145749.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
ZWS1219]
gi|421792488|ref|ZP_16228641.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-2]
gi|424053390|ref|ZP_17790922.1| glycine oxidase ThiO [Acinetobacter baumannii Ab11111]
gi|424062954|ref|ZP_17800439.1| glycine oxidase ThiO [Acinetobacter baumannii Ab44444]
gi|425752546|ref|ZP_18870453.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-113]
gi|445481264|ref|ZP_21455800.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-78]
gi|183208770|gb|ACC56168.1| Glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
ACICU]
gi|322507073|gb|ADX02527.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
1656-2]
gi|323516940|gb|ADX91321.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
TCDC-AB0715]
gi|332737600|gb|EGJ68504.1| FAD dependent oxidoreductase [Acinetobacter baumannii 6014059]
gi|333366390|gb|EGK48404.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
AB210]
gi|342224409|gb|EGT89445.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ABNIH1]
gi|342233489|gb|EGT98217.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ABNIH2]
gi|342236608|gb|EGU01122.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ABNIH4]
gi|342236669|gb|EGU01180.1| glycine/D-amino acid oxidase [Acinetobacter baumannii ABNIH3]
gi|347592636|gb|AEP05357.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
MDR-ZJ06]
gi|385879402|gb|AFI96497.1| glycine/D-amino acid oxidase, deaminating [Acinetobacter baumannii
MDR-TJ]
gi|395551771|gb|EJG17780.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC189]
gi|395570086|gb|EJG30748.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-17]
gi|398328138|gb|EJN44265.1| glycine/D-amino acid oxidase [Acinetobacter baumannii AC12]
gi|404558588|gb|EKA63869.1| putative glycine oxidase ThiO [Acinetobacter baumannii IS-143]
gi|404669178|gb|EKB37085.1| glycine oxidase ThiO [Acinetobacter baumannii Ab11111]
gi|404674956|gb|EKB42681.1| glycine oxidase ThiO [Acinetobacter baumannii Ab44444]
gi|407193975|gb|EKE65123.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
ZWS1122]
gi|407194263|gb|EKE65406.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
ZWS1219]
gi|407900362|gb|AFU37193.1| glycine/D-amino acid oxidase (deaminating) [Acinetobacter baumannii
TYTH-1]
gi|408695336|gb|EKL40892.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC180]
gi|409986553|gb|EKO42747.1| glycine/D-amino acid oxidase [Acinetobacter baumannii AC30]
gi|410400068|gb|EKP52248.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-2]
gi|425498777|gb|EKU64843.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-113]
gi|444770617|gb|ELW94767.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-78]
Length = 371
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 173/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + E + A Y +L + ++ +
Sbjct: 110 QEPMQRCEYLQRDALEQVNPH--ISEQFQEAI--YFPELSNIRNPRVLQSLISYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F + PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFENTPVKKLIQQGDA--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
DIPV+P +G +L+ + P ++ M +
Sbjct: 218 DIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPALVDAKAYS 361
>gi|299771270|ref|YP_003733296.1| putative D-amino acid oxidase [Acinetobacter oleivorans DR1]
gi|298701358|gb|ADI91923.1| putative D-amino acid oxidase [Acinetobacter oleivorans DR1]
Length = 371
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 170/414 (41%), Gaps = 63/414 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V +V++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTVSIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLSPVTGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + +A + P +L + ++ +
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQQAIYFP---ELSNIRNPRVLQSLISYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H V L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHAAVKKLIQHGDV--IQAIQTEDGCKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+IPV+P +G +L+ + P ++ M +
Sbjct: 218 EIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G++V GSS GF+T ++T I + E P+L D + + GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPELADFPIVQRWA------GLRPSS 307
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 308 PNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|420200609|ref|ZP_14706251.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM031]
gi|394267807|gb|EJE12388.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM031]
Length = 372
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 184/417 (44%), Gaps = 60/417 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IAR L + L VAV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARH-LSATHLDVAVIDRDVPGKHASYKAGGMLGAQNEFTEDSDLFQ 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ +K + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANERDDISSIKRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS DLLQ L GE A +P+D Q++A +A +E + RY
Sbjct: 118 SVKQLSDDDLLQ----LTHGEVNPSYAAIHIPHDGQINAHHYTLALLE--SMKLREIKRY 171
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
A VT + R N V+T++++ ++VA G WS L+ T+ L
Sbjct: 172 AS---TEVTSIERHNG---YYLVKTNQSSTIEAHKVIVAGGAWSSQLL------TQYHLQ 219
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
V KG +++LEN N M G + P Q N
Sbjct: 220 RQVIGVKGEVILLENNNLALTETLFMTNG------CYIVPKQPN---------------- 257
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
++G++ +F ++ +D + + A P+L+D + S G+RPY
Sbjct: 258 -RFLIGATSEFNNYSVGTTDEGMDWLLRHAYHRVPQLKDSHILKKWS------GVRPYTE 310
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PV+ + +++ +GH G+ L+ +A+ +L+ + F V R
Sbjct: 311 KEMPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWLLSGIKPSRYSSFTVTRR 365
>gi|445435638|ref|ZP_21440358.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC021]
gi|444755388|gb|ELW79972.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC021]
Length = 371
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 173/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDIGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ R+
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLIRYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H V L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHAAVKKLIQQGDV--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+IPV+P +G +L+ + P ++ M +
Sbjct: 218 EIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|298249931|ref|ZP_06973735.1| glycine oxidase ThiO [Ktedonobacter racemifer DSM 44963]
gi|297547935|gb|EFH81802.1| glycine oxidase ThiO [Ktedonobacter racemifer DSM 44963]
Length = 374
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 172/411 (41%), Gaps = 50/411 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVH-RTPGSEIWD 141
D II+G G+ G +IA L + V V+++ S ++ A G + + G D
Sbjct: 8 DTIIMGGGVTGCSIAYHLQQ-AGARVTVIEREEIASESSSAAAGMLAPIGGMRQGDAFTD 66
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
L + KL L + Q +Q + + GSL I + EE L+ER
Sbjct: 67 LLIAGRKLNLELLPQI--QATSGVQT-EYHRPGSLRIANSEEEAQRLRERFNDWQNLQQE 123
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLD-AMLAVAYIEKGNRHFASKGRYAEFY 260
+L+ + EP L+ E A + P++ + A + AY A R+ E
Sbjct: 124 VRWLNGDEARGIEP-LLGAETCAAVYAPHEGSMKPAGVTRAYAGAAR---AIGVRFIERC 179
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
V + R + V AV+TS + + +VVAAG WSG D L D+PV
Sbjct: 180 E--VIGIEREDYM--VTAVRTSTGDILPCQHLVVAAGAWSGRC-GDWLG-----FDLPVT 229
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P +G +L L + S E Y L P N +
Sbjct: 230 PTRGQILALHQPEPPLTHILSGEGIY-------LIPKPDN-----------------TIF 265
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+G++ + AGF+ + I + A P L +A ++ GLRP PD +P
Sbjct: 266 VGATVEKAGFDKRLTAGAIASLLNSAIRVAPSLEQAFIA------RMWAGLRPGTPDNRP 319
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
++GP PG V LATGH G+G L+ T +L+++++LT + PF V+
Sbjct: 320 ILGPAPGWHNVTLATGHNGVGFELSAITGKLISELILTGQMPSLLQPFGVE 370
>gi|403673859|ref|ZP_10936141.1| glycine oxidase [Acinetobacter sp. NCTC 10304]
Length = 371
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 177/413 (42%), Gaps = 61/413 (14%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLA 143
+ IIGAGI GL A +L V ++++ D+ A+ AG G + ++ W
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYP------WRYM 55
Query: 144 LRSNKLWKMLADSLR--DQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQLCEAG 199
N+L + S + +Q L P+ I ++ TG L+ E+ + +Q E
Sbjct: 56 HAVNQLAQFGKASYQAWNQKLYPITGIDFEIHDTGMLIFDE--EDFDVGLSYAEQHQEPM 113
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQL-DAMLAVAYIEKGNRHFASKGRYAE 258
R EYL L Q P + + A + P S + + + + I +H E
Sbjct: 114 QRCEYLQRDALEQVNPHI-SDQFQEAIYFPELSNIRNPRVLQSLISYLKQH-----PNVE 167
Query: 259 FYHD-PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
F+ + PV L++ ++A+QT ++ V+ +G WS +++ LDI
Sbjct: 168 FFENTPVKKLIQQGDA--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQLDI 219
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
PV+P +G +L+ + P ++ M + G
Sbjct: 220 PVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRMDG 255
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPYMP 436
++V GSS GF+T ++T I + E P+L ADF I +R GLRP P
Sbjct: 256 HIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPSSP 308
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 309 NGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLDQPTLVDAKAYS 361
>gi|419769773|ref|ZP_14295864.1| glycine oxidase ThiO [Staphylococcus aureus subsp. aureus IS-250]
gi|419771998|ref|ZP_14298041.1| glycine oxidase ThiO [Staphylococcus aureus subsp. aureus IS-K]
gi|420162447|ref|ZP_14669203.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM095]
gi|420168150|ref|ZP_14674800.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM087]
gi|383357836|gb|EID35300.1| glycine oxidase ThiO [Staphylococcus aureus subsp. aureus IS-250]
gi|383360057|gb|EID37461.1| glycine oxidase ThiO [Staphylococcus aureus subsp. aureus IS-K]
gi|394236062|gb|EJD81608.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM095]
gi|394237198|gb|EJD82691.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM087]
Length = 372
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 189/419 (45%), Gaps = 64/419 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IAR L + L VAV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARH-LSATHLDVAVIDRDVPGKHASYKAGGMLGAQNEFTKDSDLFQ 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ +K + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANEHDDISSIKRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS DLLQ L GE A +P+D Q++A +A +E + K R
Sbjct: 118 SVKQLSDDDLLQ----LTHGEVKPSYAAIHIPHDGQINAHHYTLALLE------SMKLRD 167
Query: 257 AEFYHD-PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
+ Y VT + R N V+ Q+S T+ + K I+VA G WS L+ T+ L
Sbjct: 168 IKRYESTEVTSIERHNGYYSVKTDQSS--TIEAHK-IIVAGGAWSSQLL------TQYHL 218
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHA-SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
V KG +++LEN N L L M G + P Q N
Sbjct: 219 QRQVIGVKGEVILLEN-NDLSLTETLFMTNG------CYIVPKQPN-------------- 257
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
++G++ +F ++ +D + + A P+L+D + K G+RPY
Sbjct: 258 ---RFLIGATSEFNNYSVGTTDEGMDWLLRHAYHRVPQLKDSHIL------KKWSGVRPY 308
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PV+ + +++ +GH G+ L+ +A+ +L+ + F V R
Sbjct: 309 TEKEMPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWLLSGIKPSRYSSFTVTRR 365
>gi|441195545|ref|ZP_20970779.1| FAD dependent oxidoreductase [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440613585|gb|ELQ77027.1| FAD dependent oxidoreductase [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 209
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
A++TS TL A+V A G W+G +PV PR+G +LV +
Sbjct: 3 ALRTSAGTL-PCGAVVNACGPWAGHFAR------AAGAPLPVAPRRGLVLVTAPLPPGTV 55
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQI-LSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
H +A YVG V G L S G +++GSSR+ GF
Sbjct: 56 RHKVYDADYVG---------AVGSGDADLRTSTVVEATRGGTVLIGSSRERTGFQERFRA 106
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
++ + ++A +P L + + + G RPY PD PVIGP P L ++ ATG
Sbjct: 107 AVLGELARKATALFPVLGRVPVI------RAYGGFRPYTPDHLPVIGPDPRLPGLWHATG 160
Query: 457 HEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
HEG G+ LA T EL+A + ++D P+ V
Sbjct: 161 HEGAGIGLAPATGELLAQLYAGERPRLDPEPYRV 194
>gi|27468976|ref|NP_765613.1| glycine oxidase [Staphylococcus epidermidis ATCC 12228]
gi|57865487|ref|YP_189627.1| glycine oxidase [Staphylococcus epidermidis RP62A]
gi|293367183|ref|ZP_06613854.1| glycine oxidase [Staphylococcus epidermidis M23864:W2(grey)]
gi|417660012|ref|ZP_12309604.1| putative glycine oxidase ThiO [Staphylococcus epidermidis VCU045]
gi|417909378|ref|ZP_12553116.1| putative glycine oxidase ThiO [Staphylococcus epidermidis VCU037]
gi|417910456|ref|ZP_12554175.1| putative glycine oxidase ThiO [Staphylococcus epidermidis VCU105]
gi|418603534|ref|ZP_13166917.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU041]
gi|418606123|ref|ZP_13169418.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU057]
gi|418610924|ref|ZP_13174029.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU065]
gi|418612425|ref|ZP_13175465.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU117]
gi|418618090|ref|ZP_13180971.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU120]
gi|418622845|ref|ZP_13185578.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU123]
gi|418627553|ref|ZP_13190128.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU126]
gi|420165829|ref|ZP_14672519.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM088]
gi|420183769|ref|ZP_14689895.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM049]
gi|420188466|ref|ZP_14694475.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM039]
gi|420195044|ref|ZP_14700840.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM021]
gi|420201784|ref|ZP_14707380.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM018]
gi|420211731|ref|ZP_14717088.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM001]
gi|420214981|ref|ZP_14720255.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIH05005]
gi|420217439|ref|ZP_14722593.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIH05001]
gi|420219752|ref|ZP_14724751.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIH04008]
gi|420223206|ref|ZP_14728106.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIH08001]
gi|420224143|ref|ZP_14729000.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIH06004]
gi|420230211|ref|ZP_14734906.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIH04003]
gi|420232662|ref|ZP_14737294.1| putative glycine oxidase ThiO [Staphylococcus epidermidis
NIH051668]
gi|27316524|gb|AAO05699.1|AE016750_304 glycine oxidase [Staphylococcus epidermidis ATCC 12228]
gi|57636145|gb|AAW52933.1| glycine oxidase, putative [Staphylococcus epidermidis RP62A]
gi|291318744|gb|EFE59119.1| glycine oxidase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329734568|gb|EGG70879.1| putative glycine oxidase ThiO [Staphylococcus epidermidis VCU045]
gi|341653469|gb|EGS77238.1| putative glycine oxidase ThiO [Staphylococcus epidermidis VCU037]
gi|341655416|gb|EGS79141.1| putative glycine oxidase ThiO [Staphylococcus epidermidis VCU105]
gi|374403307|gb|EHQ74314.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU065]
gi|374407237|gb|EHQ78101.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU041]
gi|374409395|gb|EHQ80190.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU057]
gi|374816810|gb|EHR81008.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU120]
gi|374819140|gb|EHR83270.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU117]
gi|374825517|gb|EHR89452.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU123]
gi|374829268|gb|EHR93073.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU126]
gi|394234652|gb|EJD80228.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM088]
gi|394248462|gb|EJD93699.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM049]
gi|394254831|gb|EJD99795.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM039]
gi|394263781|gb|EJE08506.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM021]
gi|394270262|gb|EJE14781.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM018]
gi|394280457|gb|EJE24735.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM001]
gi|394282846|gb|EJE27029.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIH05005]
gi|394287742|gb|EJE31691.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIH08001]
gi|394287905|gb|EJE31853.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIH04008]
gi|394288158|gb|EJE32099.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIH05001]
gi|394296373|gb|EJE40002.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIH06004]
gi|394298052|gb|EJE41637.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIH04003]
gi|394301113|gb|EJE44587.1| putative glycine oxidase ThiO [Staphylococcus epidermidis
NIH051668]
Length = 372
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 189/419 (45%), Gaps = 64/419 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IAR L + L VAV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARH-LSATHLDVAVIDRDVPGKHASYKAGGMLGAQNEFTEDSDLFQ 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ +K + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANEHDDISSIKRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS DLLQ L GE A +P+D Q++A +A +E + K R
Sbjct: 118 SVKQLSDDDLLQ----LTHGEVKPSYAAIHIPHDGQINAHHYTLALLE------SMKLRD 167
Query: 257 AEFYHD-PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
+ Y VT + R N V+ Q+S T+ + K I+VA G WS L+ T+ L
Sbjct: 168 IKRYESTEVTSIERHNGYYSVKTDQSS--TIEAHK-IIVAGGAWSSQLL------TQYHL 218
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHA-SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
V KG +++LEN N L L M G + P Q N
Sbjct: 219 QRQVIGVKGEVILLEN-NDLSLTETLFMTNG------CYIVPKQPN-------------- 257
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
++G++ +F ++ +D + + A P+L+D + K G+RPY
Sbjct: 258 ---RFLIGATSEFNNYSVGTTDEGMDWLLRHAYHRVPQLKDSHIL------KKWSGVRPY 308
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PV+ + +++ +GH G+ L+ +A+ +L+ + F V R
Sbjct: 309 TEKEMPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWLLSGIKPSRYSSFTVTRR 365
>gi|344341586|ref|ZP_08772504.1| Glycine oxidase [Thiocapsa marina 5811]
gi|343798518|gb|EGV16474.1| Glycine oxidase [Thiocapsa marina 5811]
Length = 361
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 179/418 (42%), Gaps = 73/418 (17%)
Query: 83 DVIIIGAGIIGLTIARQLL-VGSDLSVAVVDKVVPCSGATGAG---QGYIWMVHRTPGSE 138
DV+++G GIIGL AR+L G+D+++ + + S G G Y W R P +
Sbjct: 3 DVLVVGGGIIGLLTARELAEAGADVTLIEMGETGRESSWAGGGIISPIYPW---RYPEA- 58
Query: 139 IWDLALRSNKLWKMLADSL-RDQGLDPLQVIGWKQTGSLLIGRTPEEL-VMLKERVKQLC 196
+ LA S + LA++L R+ G+DP +G L++ L V ER
Sbjct: 59 VTALATWSQHAYPELAEALLRETGIDP----ELTPSGMLVLDMEEHSLAVSWAERHGHPI 114
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRY 256
EA + + L + EP+L G +R LP +Q+ + K R + R
Sbjct: 115 EA------VEGAHLHEIEPQLGTGL-TRGLLLPRIAQVR----TPRLTKAARRSVEE-RI 162
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
++ V LL +G+V V+T + +++ +V+ G W+ L+ L +I
Sbjct: 163 QLRENEEVLELL--VDSGQVTGVRTPDGAIQARR-VVICTGAWTARLLEQLGETPDIA-- 217
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
P +G +++ PGQ+NH I++ +I
Sbjct: 218 ----PVRGQMILFYG-----------------------KPGQINH-----ITLHREQYLI 245
Query: 377 ----GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G ++ GS+ + GF + + +++ A E +P L+ + D + GLR
Sbjct: 246 PRRDGRMLFGSTLEHTGFVKTTTAEVKEALYRAAFEMFPVLKRTPIEDHWA------GLR 299
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
P P G P IG PG+ +F+ GH GL +A L D++L +D AP+AV
Sbjct: 300 PSSPSGIPFIGAYPGVDGLFINAGHFRNGLVTGPASARLATDLILGRTPILDPAPYAV 357
>gi|336124864|ref|YP_004566912.1| D-amino acid dehydrogenase small subunit [Vibrio anguillarum 775]
gi|335342587|gb|AEH33870.1| D-amino acid dehydrogenase small subunit [Vibrio anguillarum 775]
Length = 419
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 43/308 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
++ G+L + R+ ++L +++ +K L ++G+R + L ++ EP L + D +L
Sbjct: 133 RRLGTLQVFRSEKQLQAIQKDIKLLEQSGIRYQLLDVDGCIKQEPGLALVRDKLRGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + + +K R +F D L + ++ AVQT K L +
Sbjct: 193 PDDETGDCYLFCQQLTE-----LAKSRGVQFLFDTQIKTLTTEGK-KITAVQTDKGELKA 246
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
K VVA G +S +L+ L + IPV P KG+ L L
Sbjct: 247 DK-YVVALGSYSTALLATL------GISIPVYPVKGYSLTLPIV---------------- 283
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D L P + +++T D I + + + AGF+ + I K +
Sbjct: 284 --DAELSPRSTVMDETYKVAITRFEDRIR---VAGTAELAGFDPALPDARKATIAKVVTD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ DL A+F + G RP PDG P+IG P ++ TGH LG ++A G+
Sbjct: 339 LFPQGGDLAQAEFWT------GFRPMTPDGTPIIGSTP-FENLYTNTGHGTLGWTMACGS 391
Query: 469 AELVADMV 476
+L+AD+V
Sbjct: 392 GQLLADIV 399
>gi|420207369|ref|ZP_14712861.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM008]
gi|394275843|gb|EJE20216.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM008]
Length = 372
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 188/419 (44%), Gaps = 64/419 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IAR L + L VAV+D+ VP A+ G + + T S ++
Sbjct: 3 DVLIIGSGVIGMSIARH-LSATHLDVAVIDRDVPGKHASYKAGGMLGAQNEFTEDSNLFQ 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ +K + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANEHDDISSIKRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS DLLQ L GE A +P+D Q++A +A +E + K R
Sbjct: 118 SVKQLSDDDLLQ----LTHGEVKPSYAAIHIPHDGQINAHHYTLALLE------SMKLRE 167
Query: 257 AEFYHD-PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
+ Y VT + R N V+ Q+S T+ + K I+VA G WS L+ T+ L
Sbjct: 168 IKRYESTEVTSIERHNGYYSVKTDQSS--TIEAHK-IIVAGGAWSSQLL------TQYHL 218
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHA-SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
V KG +++LEN N L L M G + P Q N
Sbjct: 219 QRQVIGVKGEVILLEN-NDLSLTETLFMTNG------CYIVPKQPN-------------- 257
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
++G++ +F ++ +D + + A P+L+D + K G+RPY
Sbjct: 258 ---RFLIGATSEFNNYSVGTTDEGMDWLLRHAYHRVPQLKDSHIL------KKWSGVRPY 308
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PV+ + +++ +GH G+ L+ +A+ +L+ + F V R
Sbjct: 309 TEKEMPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWLLSGIKPSRYSSFTVTRR 365
>gi|167913688|ref|ZP_02500779.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 112]
Length = 233
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+V ++P++P+KGHLL+ + + + +++H +E GY + S++
Sbjct: 56 LVPELPLRPKKGHLLITDRYPA-RVSHQLVELGYAA---------SAHASDGTSVAFNVQ 105
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G L++GSSRQF + VE ++ R+ +RA + P L L + + G R
Sbjct: 106 PRPTGQLLIGSSRQFDTEDPRVEAPVLARMLRRALGYLPALAGL------NGIRAWTGFR 159
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P++G P V+LA GHEGLG++ A G+A ++A ++ +D+ P+
Sbjct: 160 AASPDGLPLLGEHPSRRGVWLALGHEGLGVTTAPGSARVLAALMFGERAAIDAEPY 215
>gi|345302376|ref|YP_004824278.1| D-amino-acid dehydrogenase [Rhodothermus marinus SG0.5JP17-172]
gi|345111609|gb|AEN72441.1| D-amino-acid dehydrogenase [Rhodothermus marinus SG0.5JP17-172]
Length = 415
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 180/461 (39%), Gaps = 111/461 (24%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDK-------------------VVPCSGATGAG 124
V+IIG G IGL A L DLS+ V+D+ +VP +
Sbjct: 4 VVIIGGGAIGLASAFFLRQRGDLSITVIDQGPIGDGCSYGNAGFISPSHLVPLAAPGVIS 63
Query: 125 QGYIWMVHRTPGSEI-----WDLAL-----------------RSNKLWKMLADSLRDQGL 162
+G W+++ P S WD L RS + + L + R+
Sbjct: 64 KGLRWLLN--PESPFYIRPRWDPELFRWLWLFRRAATEAHVIRSAPVLQALLERSRELTA 121
Query: 163 DPLQVIG---WKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV 219
+ +G +++ G L+ ++ E + ++ G+ E++ + L + +
Sbjct: 122 RLQEGVGDFEFRRDGLLMPYQSEEGRHECAQLAREAERLGMAHEWIPAERLAE-----LA 176
Query: 220 GEDSRAA---FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE------FYHDPVTCLLRS 270
G + RA F P D+ L + +R A+ RY E PVT L R
Sbjct: 177 GAEVRAEGGLFFPGDAHL----------RPDRFTAALHRYLERQGVRFLAETPVTGLERR 226
Query: 271 NSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLE 330
G+V V+T L S +VVAAG WS L+ + +P++P KG+
Sbjct: 227 G--GQVTGVRTPDGVL-SADQVVVAAGAWSARLVR------AVGYRLPLQPAKGY----- 272
Query: 331 NFNSLKLNHASMEAGYVGHHDLTLHP---GQVNHGQILSISMTATTDVIGNLVLGSSRQF 387
LT P G +L+ + A T L + +
Sbjct: 273 --------------------SLTFTPPPEGMPRRPLLLTETKVAVTPFREAFRLAGTLEL 312
Query: 388 AGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPG 447
+G + ++ I++ A + P LR + ++ GLRP PDG PV+ VPG
Sbjct: 313 SGLELSIRDRRVEAIYRAAGRYLPALR----LPRMEQAEIWAGLRPCTPDGLPVVDRVPG 368
Query: 448 LSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
++LATGH LG+SLA T ELVA ++ VD P
Sbjct: 369 TENLWLATGHAVLGISLAAVTGELVAALISGAEPPVDPTPL 409
>gi|167826943|ref|ZP_02458414.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 9]
Length = 204
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+V ++P++P+KGHLL+ + + + +++H +E GY + S++
Sbjct: 27 LVPELPLRPKKGHLLITDRYPA-RVSHQLVELGYAA---------SAHASDGTSVAFNVQ 76
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G L++GSSRQF + VE ++ R+ +RA + P L L + + G R
Sbjct: 77 PRPTGQLLIGSSRQFDTEDPRVEAPVLARMLRRALGYLPALAGL------NGIRAWTGFR 130
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P++G P V+LA GHEGLG++ A G+A ++A ++ +D+ P+
Sbjct: 131 AASPDGLPLLGEHPSRRGVWLALGHEGLGVTTAPGSARVLAALMFGERAAIDAEPY 186
>gi|402849167|ref|ZP_10897407.1| Glycine oxidase ThiO [Rhodovulum sp. PH10]
gi|402500480|gb|EJW12152.1| Glycine oxidase ThiO [Rhodovulum sp. PH10]
Length = 392
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 189/423 (44%), Gaps = 53/423 (12%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWM-VH 132
T++S + DV++IGAGI+GL +A +L ++V V+D+ GA+ G +
Sbjct: 10 TSNSAGASPDVVVIGAGIVGLGVAWRLRQ-RGVAVTVLDQGEIARGASHVAGGMLAACAE 68
Query: 133 RTPGSE-IWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKER 191
PG E + L + LW A L +++ + G++++ T ++ L
Sbjct: 69 AEPGEEALVRLGRYAQSLWPSFAAELESIAGHSVEL---RTEGTMVMAVTADDRATLGHH 125
Query: 192 VKQLCEAGLRAEYLSSSDLLQAEPEL---MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNR 248
+ GL E+LS ++ + EP L M+G AAF P D Q++ VA I R
Sbjct: 126 LAFQQSLGLPVEWLSGAEARKREPHLAPGMIG----AAFSPEDHQVETRKLVAAI----R 177
Query: 249 HFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLL 308
A + + PV L+ V V+ + ++ +V+AAG W+ ++ + L
Sbjct: 178 VAAERAGAVIRPNTPVASLVIEGE--RVTGVRLADGSVLPAGKVVLAAGAWARTI--EGL 233
Query: 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSIS 368
T+ PV+P KG ++VL +M+ H + PG
Sbjct: 234 PPTQ---RPPVRPIKGQVIVL-----------AMDPAAPLLHHVVWAPG---------CY 270
Query: 369 MTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR 428
+ D G L++G++ + GF+T + I + + P + +L + +F+
Sbjct: 271 LVPRRD--GRLLVGATVEEKGFDTTLTAGGIMSVLQNGWRALPGIEELPIVEFM------ 322
Query: 429 IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+G RP D PV+GP + + ATGH G+ LA TA+ +A +V+ + + APF
Sbjct: 323 VGHRPGCRDDAPVLGPA-AVDGLVYATGHHRNGILLAPVTADSIARLVIDGVVDPEIAPF 381
Query: 489 AVQ 491
++
Sbjct: 382 GME 384
>gi|167848459|ref|ZP_02473967.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei B7210]
Length = 241
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+V ++P++P+KGHLL+ + + + +++H +E GY + S++
Sbjct: 64 LVPELPLRPKKGHLLITDRYPA-RVSHQLVELGYAA---------SAHASDGTSVAFNVQ 113
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G L++GSSRQF + VE ++ R+ +RA + P L L + + G R
Sbjct: 114 PRPTGQLLIGSSRQFDTEDPRVEAPVLARMLRRALGYLPALAGL------NGIRAWTGFR 167
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P++G P V+LA GHEGLG++ A G+A ++A ++ +D+ P+
Sbjct: 168 AASPDGLPLLGEHPSRRGVWLALGHEGLGVTTAPGSARVLAALMFGERAAIDAEPY 223
>gi|167905393|ref|ZP_02492598.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei NCTC 13177]
gi|254182676|ref|ZP_04889269.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 1655]
gi|386864091|ref|YP_006277039.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 1026b]
gi|418395267|ref|ZP_12969273.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 354a]
gi|418535168|ref|ZP_13100964.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 1026a]
gi|418542817|ref|ZP_13108222.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 1258a]
gi|418549345|ref|ZP_13114408.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 1258b]
gi|184213210|gb|EDU10253.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 1655]
gi|385354645|gb|EIF60901.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 1258a]
gi|385355471|gb|EIF61661.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 1258b]
gi|385356594|gb|EIF62688.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 1026a]
gi|385374156|gb|EIF79083.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 354a]
gi|385661219|gb|AFI68641.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei 1026b]
Length = 377
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 16/176 (9%)
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+V ++P++P+KGHLL+ + + + +++H +E GY + S++
Sbjct: 200 LVPELPLRPKKGHLLITDRYPA-RVSHQLVELGYAA---------SAHASDGTSVAFNVQ 249
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G L++GSSRQF + VE ++ R+ +RA + P L L + + G R
Sbjct: 250 PRPTGQLLIGSSRQFDTEDPRVEAPVLARMLRRALGYLPALAGL------NGIRAWTGFR 303
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P++G P V+LA GHEGLG++ A G+A ++A + +D+ P+
Sbjct: 304 AASPDGLPLLGEHPSRRGVWLALGHEGLGVTTAPGSARVLAAQMFGERAAIDAEPY 359
>gi|70729947|ref|YP_259686.1| hydrogen cyanide synthase HcnC [Pseudomonas protegens Pf-5]
gi|68344246|gb|AAY91852.1| hydrogen cyanide synthase HcnC [Pseudomonas protegens Pf-5]
Length = 417
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 177/443 (39%), Gaps = 83/443 (18%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG + A QL DL VA++D P A+ A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASCAYQLSKRKDLKVALIDAKRP-GNASRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRDQGLDPLQ 166
+D AL+SN+L+ L L GL +
Sbjct: 64 IFFRMMSANRKREAQGSAVVVDSSTPHILPQSFFDFALQSNELYPRLHREL--MGLHNMD 121
Query: 167 VIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA 226
++QTG + E+ + + V + + +L + L +EP +
Sbjct: 122 -FKFEQTGLKFVIYDEEDRLYAEHIVGCIPHLSDQVRWLDQAALRASEPNVSHEAQGALE 180
Query: 227 FLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT 285
FL D Q++ L AY E A + +++ VT +L + V V+T
Sbjct: 181 FL-CDHQVNPFRLTDAYTEG-----ARQNGVDVYFNTNVTGVLHQGN--RVSGVKTDVAG 232
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
L+ ++ AAG W+ L L+ T I +IPVKP KG +L+ E L +
Sbjct: 233 LFRCTTLINAAGAWAAELS---LQATGI--EIPVKPVKGQILLTERMPKLLNGCLTTSDC 287
Query: 346 YVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKR 405
Y+ D +G+IL +GS+ + GF+ I+ + +
Sbjct: 288 YMAQKD---------NGEIL---------------IGSTTEDKGFDVTTTYPEINGLVQG 323
Query: 406 AAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLA 465
A P+L + L ++ GLRP PD P++GP+ G+ A GH G+ +
Sbjct: 324 AVRCVPELAHVNL------KRCWAGLRPGSPDELPILGPMDGVEGYLNACGHFRTGILTS 377
Query: 466 LGTAELVADMVLTNPLKVDSAPF 488
T L+ +V L +D PF
Sbjct: 378 AITGVLLDKLVNDEALPLDITPF 400
>gi|134284207|ref|ZP_01770899.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 305]
gi|134244410|gb|EBA44516.1| FAD-dependent oxidoreductase [Burkholderia pseudomallei 305]
Length = 377
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 16/176 (9%)
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+V ++P++P+KGHLL+ + + + +++H +E GY + S++
Sbjct: 200 LVPELPLRPKKGHLLITDRYPA-RVSHQLVELGYAA---------SAHASDGTSVAFNVQ 249
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G L++GSSRQF + VE ++ R+ +RA + P L L + + G R
Sbjct: 250 PRPTGQLLIGSSRQFDTEDPRVEAPVLARMLRRALGYLPALAGL------NGIRAWTGFR 303
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P++G P V+LA GHEGLG++ A G+A ++A + +D+ P+
Sbjct: 304 AASPDGLPLLGEHPSRRGVWLALGHEGLGVTTAPGSARVLAAQMFGERAAIDAEPY 359
>gi|420177073|ref|ZP_14683464.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM057]
gi|420180545|ref|ZP_14686757.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM053]
gi|394249002|gb|EJD94229.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM053]
gi|394251667|gb|EJD96751.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM057]
Length = 372
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 185/417 (44%), Gaps = 60/417 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IAR L + L VAV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARH-LSATHLDVAVIDRDVPGKHASYKAGGMLGAQNEFTEDSDLFQ 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ ++ + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANERDDISSIRRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS+ DLLQ L GE A +P+D Q++A +A +E + RY
Sbjct: 118 SVKQLSNDDLLQ----LTHGEVKPSYAAIHIPHDGQINAHHYTLALLE--SLKLREIKRY 171
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
A VT + R N +V+T++++ ++VA G WS L+ T+ L
Sbjct: 172 AS---TEVTSIERHNG---YYSVKTNQSSTIEAHKVIVAGGAWSSQLL------TQYHLQ 219
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
V KG +++LEN N M G + P Q N
Sbjct: 220 RQVIGVKGEVILLENNNLALTETLFMTNG------CYIVPKQPN---------------- 257
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
++G++ +F ++ +D + A P+L+D + S G+RPY
Sbjct: 258 -RFLIGATSEFNNYSVGTTDEGMDWLLHHAYHRVPQLKDSHILKKWS------GVRPYTE 310
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PV+ + +++ +GH G+ L+ +A+ +L+ + F V R
Sbjct: 311 KEMPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWLLSGIKPSRYSSFTVTRR 365
>gi|417951437|ref|ZP_12594538.1| D-amino acid dehydrogenase small subunit [Vibrio splendidus ATCC
33789]
gi|342804759|gb|EGU40059.1| D-amino acid dehydrogenase small subunit [Vibrio splendidus ATCC
33789]
Length = 417
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 143/313 (45%), Gaps = 53/313 (16%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R+ ++L +++ +K L E+G+ L EP L +D +L
Sbjct: 133 RQKGTLQVFRSEKQLDAIQQDMKLLTESGIEHSLFGVDQCLSVEPGLADVKDKLVGGLYL 192
Query: 229 PYDSQLDA-MLAVAYIEKGNRHFASKGRYAEFYHD-PVTCLLRSNSTGEVEAVQTSKNTL 286
P+D D +A EK +K +F D V L R N +++++ T++
Sbjct: 193 PHDETGDCHQFCLALTEK------AKSLGVQFVFDTEVLKLNRKNH--DIQSITTTQGE- 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
+ A VVA+G +S DLL++ + L IPV P KG+ L L ++ K
Sbjct: 244 FRADAYVVASGSYS----RDLLKQVD--LSIPVYPVKGYSLTLPIVSADK---------- 287
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFN---TEVEQTIIDRIW 403
P + ++MT D I + + + AGFN E + ID +
Sbjct: 288 --------SPTSTVMDETYKVAMTRFDDRIR---IAGTAELAGFNYLIPEKRKATIDMVI 336
Query: 404 KRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLS 463
K + +P+ D A++ + GLRP PDG P+IG P + +F TGH LG +
Sbjct: 337 K---DLFPQAGDFSKAEYWT------GLRPMTPDGTPIIGKTP-IKNLFTNTGHGTLGWT 386
Query: 464 LALGTAELVADMV 476
+A G+ +L+A +V
Sbjct: 387 MACGSGKLLASVV 399
>gi|75427019|sp|O85228.1|HCNC_PSEFL RecName: Full=Hydrogen cyanide synthase subunit HcnC; Short=HcnC;
AltName: Full=Glycine dehydrogenase (cyanide-forming);
Flags: Precursor
gi|3220203|gb|AAC38596.1| hydrogen cyanide synthase HcnC [Pseudomonas protegens]
Length = 417
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 177/443 (39%), Gaps = 83/443 (18%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DV+I G G+IG + A QL DL VA++D P A+ A G +W + + G
Sbjct: 5 YDVVIAGGGVIGASCAYQLSKRKDLKVALIDAKRP-GNASRASAGGLWAIGESVGLGCGV 63
Query: 137 ------------------------------SEIWDLALRSNKLWKMLADSLRDQGLDPLQ 166
+D AL+SN+L+ L L GL +
Sbjct: 64 IFFRMMSANRKREAQGSAVVVDSSTPHILPQSFFDFALQSNELYPRLHREL--MGLHNMD 121
Query: 167 VIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA 226
++QTG + E+ + + V + + +L + L +EP +
Sbjct: 122 -FKFEQTGLKFVIYDEEDRLYAEHIVGCIPHLSDQVRWLDQAALRASEPNVSHEAQGALE 180
Query: 227 FLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT 285
FL D Q++ L AY E A + +++ VT +L + V V+T
Sbjct: 181 FL-CDHQVNPFRLTDAYTEG-----ARQNGVDVYFNTNVTGVLHQGN--RVSGVKTDVAG 232
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
L+ ++ AAG W+ L L+ T I +IPVKP KG +L+ E L +
Sbjct: 233 LFRCTTLINAAGAWAAELS---LQATGI--EIPVKPVKGQILLTERMPKLLNGCLTTSDC 287
Query: 346 YVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKR 405
Y+ D +G+IL +GS+ + GF+ I+ + +
Sbjct: 288 YMAQKD---------NGEIL---------------IGSTTEDKGFDVTTTYPEINGLVQG 323
Query: 406 AAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLA 465
A P+L + L ++ GLRP PD P++GP+ G+ A GH G+ +
Sbjct: 324 AVRCVPELAHVNL------KRCWAGLRPGSPDELPILGPMDGVEGYLNACGHFRTGILTS 377
Query: 466 LGTAELVADMVLTNPLKVDSAPF 488
T L+ +V L +D PF
Sbjct: 378 AITGVLLDKLVNEEALPLDITPF 400
>gi|152985611|ref|YP_001348461.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa PA7]
gi|150960769|gb|ABR82794.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa PA7]
Length = 417
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 178/451 (39%), Gaps = 97/451 (21%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG---- 136
T+D++I G G+IG + A QL +L +AVVD P AT A G +W + + G
Sbjct: 4 TYDIVIAGGGVIGASCAYQLSKRGNLRIAVVDAKRP-GNATRASAGGLWAIGESVGLGCG 62
Query: 137 -------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDP 164
+D AL+SN L+ L L ++ G+D
Sbjct: 63 VIFFRMMSARNRREAQGAAVAVDASTPHILPPAFFDFALQSNALYPELHRELIERHGMD- 121
Query: 165 LQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSR 224
+++TG + + E+ + V Q+ + +L DL +AEP +
Sbjct: 122 ---FKFERTGLKYVIQDDEDRQYAEHIVAQIPHLADQVRWLDRDDLRRAEPAVSQAAHGA 178
Query: 225 AAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTG------EVE 277
FL D Q+ LA AY+E G R + V LL SN TG +
Sbjct: 179 LEFL-CDHQVSPFRLADAYLE-GAR------------QNGVELLLGSNVTGVLRQGRRIS 224
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
V+T + + ++ AAG W+ L E IPVKP KG +++ E L
Sbjct: 225 GVRTDNAGVLHCQTLINAAGAWAAE-----LSEMASGRRIPVKPVKGQIVLTERMPRLLN 279
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
+ Y+ D +G+IL +GS+ + GF+
Sbjct: 280 GCLTTSDCYMAQKD---------NGEIL---------------IGSTTEDKGFDVGNTFP 315
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
I + + A P+L+++ L ++ GLRP PD P++GPV + A GH
Sbjct: 316 EIAGLVQGAVRCVPQLQEVNL------KRTWAGLRPGSPDELPILGPVAEVEGYLNACGH 369
Query: 458 EGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G+ + T L+ +V L +D PF
Sbjct: 370 FRTGILTSAITGVLLDRLVHGEQLPLDLTPF 400
>gi|168069893|ref|XP_001786615.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162660863|gb|EDQ48569.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 182
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 14/165 (8%)
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHH---DLTLHPGQVNHGQILSISMTA 371
+DIP++PRKGH+LV + ++ ME GY+ ++ P +G L TA
Sbjct: 4 IDIPIEPRKGHILVASRWANIG-KRKVMEFGYLMSKFGGTRSVDPKFDRYGVALVFEPTA 62
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
+ N ++GSSRQF G ++ V+Q +I I +RA F+P L + L + GL
Sbjct: 63 SQ----NFLIGSSRQFVGMDSGVDQQVISLIAERAIRFFPVLEQIPLL------RTYAGL 112
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
RP+ D P++ + + ++A GHEG G+SLA T ++ ++M+
Sbjct: 113 RPWTADHLPIVSAIDEVPGFYVAAGHEGDGISLAAVTGKVTSEML 157
>gi|403382439|ref|ZP_10924496.1| glycine oxidase [Paenibacillus sp. JC66]
Length = 369
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 159/397 (40%), Gaps = 54/397 (13%)
Query: 84 VIIIGAGIIGLTIARQLL-VGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGS---EI 139
VI++G G+IGL +A +L G +++V ++ C G + + G +
Sbjct: 5 VIVLGGGVIGLAVAFELAGRGHEVTVLEANR---CGGQASGAAAGMLAPYSENGEGPDDF 61
Query: 140 WDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
+ L S L+ ++ L + ++GSL +G + + + ER+ E G
Sbjct: 62 FHLCRSSLALYPRWQHEVK---LASGCTFEYTESGSLYVGYHEADELAMAERMAWQNEWG 118
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
LS +L + EP + E A + P +S L A V +E+G R +
Sbjct: 119 AEVSILSGQELREREPRIHP-EARSALYCPVESHLYAPDYVVALEEGCRQRGVR------ 171
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
D + +LR S V + +V++ G WSG L++PV
Sbjct: 172 IIDELG-MLRVESWQNELVVSAGAGQRFEADRLVISTGAWSGQYAEAF------GLNLPV 224
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
P +G + E P + H + S G L
Sbjct: 225 YPIRGQICAYEQ------------------------PTRAVHHMVFSSQGYVVAKDNGTL 260
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
V G+S AGF+T V + I+R+ + +P L D + GLRP DG
Sbjct: 261 VSGASEDVAGFDTSVTEKGIERLIRWNKRLFPYLED------VQPFHRWAGLRPATQDGY 314
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
P+IG + G +V ATGH G+ L+ TA+LVAD++
Sbjct: 315 PLIGKLKGARQVIWATGHYRNGILLSPVTAKLVADLI 351
>gi|323499806|ref|ZP_08104765.1| D-amino acid dehydrogenase small subunit [Vibrio sinaloensis DSM
21326]
gi|323315047|gb|EGA68099.1| D-amino acid dehydrogenase small subunit [Vibrio sinaloensis DSM
21326]
Length = 414
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 43/305 (14%)
Query: 174 GSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV--GEDSRAAFLPYD 231
G+L I R P +L +++ ++ L E+G R + L + L+ EP LM G+ +LP D
Sbjct: 136 GTLQIFRNPAQLKAVEKDIQLLEESGTRYQLLDTEQCLKQEPGLMAMQGDLVGGLYLPDD 195
Query: 232 SQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKA 291
D L +++ A Y+ VT L+ T + A QT+ + A
Sbjct: 196 ETGDCYLFCQQLQEK----AQAAGVQFLYNTEVTRLVVEKQT--IVAAQTTAGQI-EADA 248
Query: 292 IVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHD 351
VVA G +S +L+ DL +D+P+ P KG+ L L N +++ D
Sbjct: 249 FVVALGSYSKTLLGDL------GIDVPIYPVKGYSLTLPIINEQFSPQSTI-------MD 295
Query: 352 LTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYP 411
T Q + ++ TA + AGF+ + + + + + +P
Sbjct: 296 ETYKVALTRFDQRIRVAGTA--------------ELAGFDPALPEKRLATLNHVVSNLFP 341
Query: 412 KLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAEL 471
DL A++ S G RP PDG P+IG P + ++ TGH LG ++A G+AE+
Sbjct: 342 DGTDLAQAEYWS------GFRPMTPDGTPIIGATP-IHNLYTNTGHGTLGWTMACGSAEI 394
Query: 472 VADMV 476
++ +V
Sbjct: 395 LSQIV 399
>gi|417555597|ref|ZP_12206666.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-81]
gi|417561350|ref|ZP_12212229.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC137]
gi|421201385|ref|ZP_15658544.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC109]
gi|421456427|ref|ZP_15905769.1| putative glycine oxidase ThiO [Acinetobacter baumannii IS-123]
gi|421635520|ref|ZP_16076122.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-13]
gi|421804941|ref|ZP_16240835.1| putative glycine oxidase ThiO [Acinetobacter baumannii WC-A-694]
gi|395523932|gb|EJG12021.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC137]
gi|395563417|gb|EJG25070.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC109]
gi|400210855|gb|EJO41819.1| putative glycine oxidase ThiO [Acinetobacter baumannii IS-123]
gi|400392014|gb|EJP59061.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-81]
gi|408702339|gb|EKL47752.1| putative glycine oxidase ThiO [Acinetobacter baumannii Naval-13]
gi|410409991|gb|EKP61911.1| putative glycine oxidase ThiO [Acinetobacter baumannii WC-A-694]
Length = 371
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 173/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ +
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLISYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F + PV L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEYTPVKKLIQQGDV--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+IPV+P +G +L+ + P ++ M +
Sbjct: 218 EIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|420176049|ref|ZP_14682476.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM061]
gi|394242282|gb|EJD87682.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM061]
Length = 372
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 186/418 (44%), Gaps = 62/418 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IAR L + L VAV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARH-LSATHLDVAVIDRDVPGKHASYKAGGMLGAQNEFTKDSDLFQ 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ ++ + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANEHDDISSIRRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS DLLQ L GE A +P+D Q++A +A +E + RY
Sbjct: 118 SVKQLSDDDLLQ----LTHGEVKPSYAAIHIPHDGQINAHHYTLALLE--SLKLREIKRY 171
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
A VT + R N +V+T++++ ++VA G WS L+ T+ L
Sbjct: 172 AS---TEVTSIERHNG---YYSVKTNQSSTIEAHKVIVAGGAWSSQLL------TQYHLQ 219
Query: 317 IPVKPRKGHLLVLENFNSLKLNHA-SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
V KG +++LEN N L L M G + P Q N
Sbjct: 220 RQVIGVKGEIILLEN-NDLALTETLFMTNG------CYIVPKQPN--------------- 257
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
++G++ +F ++ +D + A P+L+D + S G+RPY
Sbjct: 258 --RFLIGATSEFNNYSVGTTDEGMDWLLHHAYHRVPQLKDSHILKKWS------GVRPYT 309
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PV+ + +++ +GH G+ L+ +A+ +L+ + F V R
Sbjct: 310 EKEMPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWLLSGIKPSRYSSFTVTRR 365
>gi|269836623|ref|YP_003318851.1| FAD dependent oxidoreductase [Sphaerobacter thermophilus DSM 20745]
gi|269785886|gb|ACZ38029.1| FAD dependent oxidoreductase [Sphaerobacter thermophilus DSM 20745]
Length = 371
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 177/412 (42%), Gaps = 67/412 (16%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
DV++IGAG+ G A L + + V VV++ CS A+GA G + + R PG + DL
Sbjct: 12 DVVVIGAGVFGAATAFHL-AEAGVDVVVVERGDFCSEASGANVGLVSLSPRPPGL-MADL 69
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ L++ L+D L + + ++ TG + +G T E L + + ++ G+
Sbjct: 70 CRHATDLYEALSDRLGRE-------VHFQPTGVIRVGMTEESLADVIDWAERQRSVGIEV 122
Query: 203 EYLSSSDLLQAEPELMVG-----EDSRAAFL-PYDSQLDAMLAVAYIEKGNRHFASKGRY 256
+ LS +L + EP L G R F+ P+ + Y+E+ A+
Sbjct: 123 DVLSGEELRELEPLLPEGVLGGCHTPRGGFVSPF------AVVAGYLERARELGATL--- 173
Query: 257 AEFYHDPVTCLLR-SNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
P+T + + G V +V T++ + + A+V AAG W+G + + L
Sbjct: 174 -----VPMTTVTGITVRGGRVVSVDTTRGRIETD-AVVNAAGAWAGEV------SAMVGL 221
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
P+ P +G +LV E L H ++ IS + +
Sbjct: 222 HTPITPIRGQVLVTEPIAGLP------------------------HRVVMGISPSIRSTW 257
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
N ++GS ++ AGF V ++ + E YP LR++ + S GLRP
Sbjct: 258 AANGIIGSIQEDAGFEKRVTLAVMRDFARGITEMYPHLREVQVIRAWS------GLRPKT 311
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAP 487
PD ++G + +ATG +G+ L E+VAD+VL + D P
Sbjct: 312 PDQMLILGESEQVPGFVVATGGFDIGMMLGPAVGEVVADVVLGRTPRFDLTP 363
>gi|91779221|ref|YP_554429.1| putative oxidoreductase [Burkholderia xenovorans LB400]
gi|91691881|gb|ABE35079.1| putative oxidoreductase [Burkholderia xenovorans LB400]
Length = 376
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 17/178 (9%)
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTA 371
++V +P++P+KGHLL+ + + L + H +E GY+ +H S++ A
Sbjct: 202 QLVPSLPLQPKKGHLLITDRYPGL-IRHQLLELGYIK---------SAHHAAGTSVAFNA 251
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
G L++GSSRQF + V+ ++ ++ +RAA + P L L + + G
Sbjct: 252 QPRPTGQLLIGSSRQFDSTDPAVDLPVLAQMLQRAARYLPVLPTL------NGIRAWTGF 305
Query: 432 RPYMPDGKPVIGPVPGLSK-VFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
R PDG P+IG + V+LA GHEGLG++ +L TA+L+A + + P+
Sbjct: 306 RAATPDGLPLIGAAGDFAPGVWLAVGHEGLGVTTSLATAKLLAAQIAAGVAPIPVEPY 363
>gi|296389392|ref|ZP_06878867.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa PAb1]
gi|416878644|ref|ZP_11920473.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa 152504]
gi|334838128|gb|EGM16860.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa 152504]
Length = 417
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 177/451 (39%), Gaps = 97/451 (21%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG---- 136
T+D++I G G+IG + A QL +L +AVVD P AT A G +W + + G
Sbjct: 4 TYDIVIAGGGVIGASCAYQLSRRGNLRIAVVDDKRP-GNATRASAGGLWAIGESVGLGCG 62
Query: 137 -------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDP 164
+DLAL+SN L+ L L ++ G+D
Sbjct: 63 VIFFRMMSSRNRREAQGAAVAVDASTPHILPPAFFDLALQSNALYPELHRELIERHGMD- 121
Query: 165 LQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSR 224
+++TG + + E+ + V Q+ + +L +L +AEP +
Sbjct: 122 ---FKFERTGLKYVIQDDEDRQYAEHIVAQIPHLAEQVRWLDREELRRAEPAVSHAAHGA 178
Query: 225 AAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTG------EVE 277
FL D Q+ LA AY+E + + V LL +N G +
Sbjct: 179 LEFL-CDHQVSPFRLADAYLEAARQ-------------NGVELLLGTNVIGVLRQGRRIS 224
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
V+T + + ++ AAG W+ L E IPVKP KG +++ E L
Sbjct: 225 GVRTDNAGVLHCRTLINAAGAWAAE-----LSEMATGRRIPVKPVKGQIVLTERMPRLLN 279
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
+ Y+ D +G+IL +GS+ + GF+
Sbjct: 280 GCLTTSDCYMAQKD---------NGEIL---------------IGSTTEDKGFDVSNTFP 315
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
I + + A P+L+ + L ++ GLRP PD P++GPV + A GH
Sbjct: 316 EIAGLVQGAVRCVPELQQVNL------KRTWAGLRPGSPDELPILGPVAEVEGYLNACGH 369
Query: 458 EGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G+ + T L+ +V L +D APF
Sbjct: 370 FRTGILTSAITGVLLDRLVHEETLPLDIAPF 400
>gi|15597391|ref|NP_250885.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa PAO1]
gi|107101622|ref|ZP_01365540.1| hypothetical protein PaerPA_01002666 [Pseudomonas aeruginosa PACS2]
gi|218891852|ref|YP_002440719.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa LESB58]
gi|386058903|ref|YP_005975425.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa M18]
gi|418585752|ref|ZP_13149799.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa MPAO1/P1]
gi|418592369|ref|ZP_13156241.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa MPAO1/P2]
gi|421160752|ref|ZP_15619752.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa ATCC 25324]
gi|421516852|ref|ZP_15963538.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa PAO579]
gi|451986285|ref|ZP_21934473.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa 18A]
gi|410591635|sp|G3XD12.1|HCNC_PSEAE RecName: Full=Hydrogen cyanide synthase subunit HcnC; Short=HcnC;
AltName: Full=Glycine dehydrogenase (cyanide-forming);
Flags: Precursor
gi|6644364|gb|AAF21030.1|AF208523_3 hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa PAO1]
gi|9948217|gb|AAG05583.1|AE004646_4 hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa PAO1]
gi|218772078|emb|CAW27857.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa LESB58]
gi|347305209|gb|AEO75323.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa M18]
gi|375044041|gb|EHS36653.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa MPAO1/P1]
gi|375048795|gb|EHS41310.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa MPAO1/P2]
gi|404350580|gb|EJZ76917.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa PAO579]
gi|404542684|gb|EKA51996.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa ATCC 25324]
gi|451756001|emb|CCQ86996.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa 18A]
gi|453044291|gb|EME92016.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa PA21_ST175]
Length = 417
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 178/446 (39%), Gaps = 87/446 (19%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG---- 136
T+D++I G G+IG + A QL +L +AVVD P AT A G +W + + G
Sbjct: 4 TYDIVIAGGGVIGASCAYQLSRRGNLRIAVVDDKRP-GNATRASAGGLWAIGESVGLGCG 62
Query: 137 -------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDP 164
+DLAL+SN L+ L L ++ G+D
Sbjct: 63 VIFFRMMSSRNRREAQGAAVAVDASTPHILPPAFFDLALQSNALYPELHRELIERHGMD- 121
Query: 165 LQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSR 224
+++TG + + E+ + V Q+ + +L +L +AEP +
Sbjct: 122 ---FKFERTGLKYVIQDDEDRQYAEHIVAQIPHLAEQVRWLDREELRRAEPAVSHAAHGA 178
Query: 225 AAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDP-VTCLLRSNSTGEVEAVQTS 282
FL D Q+ LA AY+E A++ E VT +LR + V+T
Sbjct: 179 LEFL-CDHQVSPFRLADAYLE------AARQNGVELLPGTNVTGVLRQGR--RISGVRTD 229
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
+ + ++ AAG W+ L E IPVKP KG +++ E L +
Sbjct: 230 NAGVLHCRTLINAAGAWAAE-----LSEMATGRRIPVKPVKGQIVLTERMPRLLNGCLTT 284
Query: 343 EAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRI 402
Y+ D +G+IL +GS+ + GF+ I +
Sbjct: 285 SDCYMAQKD---------NGEIL---------------IGSTTEDKGFDVSNTFPEIAGL 320
Query: 403 WKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGL 462
+ A P+L+ + L ++ GLRP PD P++GPV + A GH G+
Sbjct: 321 VQGAVRCVPELQQVNL------KRTWAGLRPGSPDELPILGPVAEVEGYLNACGHFRTGI 374
Query: 463 SLALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V L +D APF
Sbjct: 375 LTSAITGVLLDRLVHEETLPLDIAPF 400
>gi|416126701|ref|ZP_11596544.1| FAD dependent oxidoreductase family protein [Staphylococcus
epidermidis FRI909]
gi|319400198|gb|EFV88433.1| FAD dependent oxidoreductase family protein [Staphylococcus
epidermidis FRI909]
Length = 372
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 185/418 (44%), Gaps = 62/418 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IAR L + L VAV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARH-LSATHLDVAVIDRDVPGKHASYKAGGMLGAQNEFTEDSDLFQ 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ +K + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANERDDISSIKRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS DLLQ L GE A +P+D Q++A +A +E + RY
Sbjct: 118 SVKQLSDDDLLQ----LTHGEVNPSYAAIHIPHDGQINAHHYTLALLE--SMKLREIKRY 171
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
A VT + R N V+T++++ ++VA G WS L+ T+ L
Sbjct: 172 AS---TEVTSIERHNG---YYLVKTNQSSTIEAHKVIVAGGAWSSQLL------TQYHLQ 219
Query: 317 IPVKPRKGHLLVLENFNSLKLNHA-SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
V KG +++LEN N L L M G + P Q N
Sbjct: 220 RQVIGVKGEVILLEN-NDLALTETLFMTNG------CYIVPKQPN--------------- 257
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
++G++ +F ++ +D + A P+L+D + S G+RPY
Sbjct: 258 --RFLIGATSEFNNYSVGTTDEGMDWLLHHAYHRVPQLKDSHILKKWS------GVRPYT 309
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PV+ + +++ +GH G+ L+ +A+ +L+ + F V R
Sbjct: 310 EKEMPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWLLSGIKPSRYSSFTVTRR 365
>gi|418625590|ref|ZP_13188237.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU125]
gi|374824760|gb|EHR88715.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU125]
Length = 372
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 186/418 (44%), Gaps = 62/418 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IAR L + L VAV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARH-LSATHLDVAVIDRDVPGKHASYKAGGMLGAQNEFTKDSDLFQ 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ ++ + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANEHDDISSIRRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS DLLQ L GE A +P+D Q++A +A +E + RY
Sbjct: 118 SVKQLSDDDLLQ----LTHGEVKPSYAAIHIPHDGQINAHHYTLALLE--SLKLREIKRY 171
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
A VT + R N +V+T++++ ++VA G WS L+ T+ L
Sbjct: 172 AS---TEVTSIERHNG---YYSVKTNQSSTIEAHKVIVAGGAWSSQLL------TQYHLQ 219
Query: 317 IPVKPRKGHLLVLENFNSLKLNHA-SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
V KG +++LEN N L L M G + P Q N
Sbjct: 220 RQVIGVKGEVILLEN-NDLALTETLFMTNG------CYIVPKQPN--------------- 257
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
++G++ +F ++ +D + A P+L+D + S G+RPY
Sbjct: 258 --RFLIGATSEFNNYSVGTTDEGMDWLLHHAYHRVPQLKDSHMLKKWS------GVRPYT 309
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PV+ + +++ +GH G+ L+ +A+ +L+ + F V R
Sbjct: 310 EKEMPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWLLSGIKPSRYSSFTVTRR 365
>gi|242243726|ref|ZP_04798170.1| glycine oxidase [Staphylococcus epidermidis W23144]
gi|418327748|ref|ZP_12938888.1| glycine oxidase ThiO [Staphylococcus epidermidis 14.1.R1.SE]
gi|420192995|ref|ZP_14698851.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM023]
gi|242232824|gb|EES35136.1| glycine oxidase [Staphylococcus epidermidis W23144]
gi|365232705|gb|EHM73693.1| glycine oxidase ThiO [Staphylococcus epidermidis 14.1.R1.SE]
gi|394260437|gb|EJE05249.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM023]
Length = 372
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 186/418 (44%), Gaps = 62/418 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IAR L + L VAV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARH-LSATHLDVAVIDRDVPGKHASYKAGGMLGAQNEFTKDSDLFQ 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ ++ + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANEHDDISSIRRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS DLLQ L GE A +P+D Q++A +A +E + RY
Sbjct: 118 SVKQLSDDDLLQ----LTHGEVKPSYAAIHIPHDGQINAHHYTLALLE--SLKLREIKRY 171
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
A VT + R N +V+T++++ ++VA G WS L+ T+ L
Sbjct: 172 AS---TEVTSIERHNG---YYSVKTNQSSTIEAHKVIVAGGAWSSQLL------TQYHLQ 219
Query: 317 IPVKPRKGHLLVLENFNSLKLNHA-SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
V KG +++LEN N L L M G + P Q N
Sbjct: 220 RQVIGVKGEVILLEN-NDLALTETLFMTNG------CYIVPKQPN--------------- 257
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
++G++ +F ++ +D + A P+L+D + S G+RPY
Sbjct: 258 --RFLIGATSEFNNYSVGTTDEGMDWLLHHAYHRVPQLKDSHILKKWS------GVRPYT 309
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PV+ + +++ +GH G+ L+ +A+ +L+ + F V R
Sbjct: 310 EKEMPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWLLSGIKPSRYSSFTVTRR 365
>gi|313110971|ref|ZP_07796811.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa 39016]
gi|386066106|ref|YP_005981410.1| hydrogen cyanide synthase [Pseudomonas aeruginosa NCGM2.S1]
gi|310883313|gb|EFQ41907.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa 39016]
gi|348034665|dbj|BAK90025.1| hydrogen cyanide synthase [Pseudomonas aeruginosa NCGM2.S1]
Length = 417
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 177/451 (39%), Gaps = 97/451 (21%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG---- 136
T+D++I G G+IG + A QL +L +AVVD P AT A G +W + + G
Sbjct: 4 TYDIVIAGGGVIGASCAYQLSRRGNLRIAVVDDKRP-GNATRASAGGLWAIGESVGLGCG 62
Query: 137 -------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDP 164
+DLAL+SN L+ L L ++ G+D
Sbjct: 63 VIFFRMMSSRNRREAQGAAVAVDASTPHILPPAFFDLALQSNALYPELHRELIERHGMD- 121
Query: 165 LQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSR 224
+++TG + + E+ + V Q+ + +L +L +AEP +
Sbjct: 122 ---FKFERTGLKYVIQDDEDRQYAEHIVAQIPHLAEQVRWLDREELRRAEPAVSHAAHGA 178
Query: 225 AAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTG------EVE 277
FL D Q+ LA AY+E + + V LL +N G +
Sbjct: 179 LEFL-CDHQVSPFRLADAYLEAARQ-------------NGVELLLGTNVIGVLRQGRRIS 224
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
V+T + + ++ AAG W+ L E IPVKP KG +++ E L
Sbjct: 225 GVRTDNAGVLHCRTLINAAGAWAAE-----LSELATGRRIPVKPVKGQIVLTERMPRLLN 279
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
+ Y+ D +G+IL +GS+ + GF+
Sbjct: 280 GCLTTSDCYMAQKD---------NGEIL---------------IGSTTEDKGFDVSNTFP 315
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
I + + A P+L+ + L ++ GLRP PD P++GPV + A GH
Sbjct: 316 EIAGLVQGAVRCVPELQQVNL------KRTWAGLRPGSPDELPILGPVAEVEGYLNACGH 369
Query: 458 EGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G+ + T L+ +V L +D APF
Sbjct: 370 FRTGILTSAITGVLLDRLVHEETLPLDIAPF 400
>gi|116620986|ref|YP_823142.1| FAD dependent oxidoreductase [Candidatus Solibacter usitatus
Ellin6076]
gi|116224148|gb|ABJ82857.1| FAD dependent oxidoreductase [Candidatus Solibacter usitatus
Ellin6076]
Length = 385
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 173/416 (41%), Gaps = 64/416 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDK-VVPCSGATGAGQGYIWMVHRTPGSEIWD 141
DVIIIGAGI+G +IA L +V V+++ G+TG G + TP +
Sbjct: 5 DVIIIGAGIVGSSIAYHLTEAGCTNVLVLERETSQGKGSTGKSMGGVRAQFATPVN--IR 62
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
+++ S + + + G++ G L + P + L+E + EAGL+
Sbjct: 63 MSMYSIPFFAAFDEVMGHPA-------GYRPQGYLFVATKPAHMDYLRENYRAQVEAGLK 115
Query: 202 -AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEF 259
L + + + PEL + +F D +D + ++ K R E
Sbjct: 116 DVHLLDPAGVSRLAPELRSDDIIGGSFCATDGFVDPHSVMTGFMLKAME------RGVEL 169
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
D +R+++ G V V+TS L S + +V A G W+GS+ +D+PV
Sbjct: 170 LRDTEVTGIRTDAAG-VCGVETSAGFL-SSRTVVNATGAWAGSVAR------LAGVDLPV 221
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+P + L+ E F+ K++H E+ V + H G +L+ +
Sbjct: 222 EPLRRMLVPTEPFD--KVSH---ESPMVVDMNTGFHYRPEGRGLLLAWN----------- 265
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPYMPDG 438
+ GF ++ I+++ R + P CL + ++ ++ GL PD
Sbjct: 266 ---DPEETPGFKLNFDRAFIEKVLTRGVDRLP-----CLEEAEVNPKRAWAGLYEMTPDH 317
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGRC 494
PVIGPV L FLA G G G+ + T ++AD++ V GRC
Sbjct: 318 HPVIGPVKSLPGFFLANGFSGHGVMHSPATGRILADLI-------------VHGRC 360
>gi|254235222|ref|ZP_04928545.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa C3719]
gi|392984330|ref|YP_006482917.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa DK2]
gi|419753637|ref|ZP_14280038.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa PADK2_CF510]
gi|126167153|gb|EAZ52664.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa C3719]
gi|384399937|gb|EIE46299.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa PADK2_CF510]
gi|392319835|gb|AFM65215.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa DK2]
Length = 417
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 178/446 (39%), Gaps = 87/446 (19%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG---- 136
T+D++I G G+IG + A QL +L +AVVD P AT A G +W + + G
Sbjct: 4 TYDIVIAGGGVIGASCAYQLSRRGNLRIAVVDDKRP-GNATRASAGGLWAIGESVGLGCG 62
Query: 137 -------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDP 164
+DLAL+SN L+ L L ++ G+D
Sbjct: 63 VIFFRMMSSRNRREAQGAAVAVDASTPHILPPAFFDLALQSNALYPELHRELIERHGMD- 121
Query: 165 LQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSR 224
+++TG + + E+ + V Q+ + +L +L +AEP +
Sbjct: 122 ---FKFERTGLKYVIQDDEDRQYAEHIVAQIPHLAEQVRWLDREELRRAEPAVSHAAHGA 178
Query: 225 AAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDP-VTCLLRSNSTGEVEAVQTS 282
FL D Q+ LA AY+E A++ E VT +LR + V+T
Sbjct: 179 LEFL-CDHQVSPFRLADAYLE------AARQNGVELLPGTNVTGVLRQGR--RISEVRTD 229
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
+ + ++ AAG W+ L E IPVKP KG +++ E L +
Sbjct: 230 NAGVLHCRTLINAAGAWAAE-----LSEMATGRRIPVKPVKGQIVLTERMPRLLNGCLTT 284
Query: 343 EAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRI 402
Y+ D +G+IL +GS+ + GF+ I +
Sbjct: 285 SDCYMAQKD---------NGEIL---------------IGSTTEDKGFDVSNTFPEIAGL 320
Query: 403 WKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGL 462
+ A P+L+ + L ++ GLRP PD P++GPV + A GH G+
Sbjct: 321 VQGAVRCVPELQQVNL------KRTWAGLRPGSPDELPILGPVAEVEGYLNACGHFRTGI 374
Query: 463 SLALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V L +D APF
Sbjct: 375 LTSAITGVLLDRLVHEETLPLDIAPF 400
>gi|421156152|ref|ZP_15615603.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa ATCC 14886]
gi|404519343|gb|EKA30106.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa ATCC 14886]
Length = 417
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 178/446 (39%), Gaps = 87/446 (19%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG---- 136
T+D++I G G+IG + A QL +L +AVVD P AT A G +W + + G
Sbjct: 4 TYDIVIAGGGVIGASCAYQLSRRGNLRIAVVDDKRP-GNATRASAGGLWAIGESVGLGCG 62
Query: 137 -------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLDP 164
+DLAL+SN L+ L L ++ G+D
Sbjct: 63 VIFFRMMSSRNRREAQGAAVAVDASTPHILPPAFFDLALQSNALYPELHRELIERHGMD- 121
Query: 165 LQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSR 224
+++TG + + E+ + V Q+ + +L +L +AEP +
Sbjct: 122 ---FKFERTGLKYVIQDDEDRQYAEHIVAQIPHLAEQMRWLDREELRRAEPAVSHAAHGA 178
Query: 225 AAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDP-VTCLLRSNSTGEVEAVQTS 282
FL D Q+ LA AY+E A++ E VT +LR + V+T
Sbjct: 179 LEFL-CDHQVSPFRLADAYLE------AARQNGVELLPGTNVTGVLRQGR--RISGVRTD 229
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
+ + ++ AAG W+ L E IPVKP KG +++ E L +
Sbjct: 230 NAGVLHCRTLINAAGAWAAE-----LSEMATGRRIPVKPVKGQIVLTERMPRLLNGCLTT 284
Query: 343 EAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRI 402
Y+ D +G+IL +GS+ + GF+ I +
Sbjct: 285 SDCYMAQKD---------NGEIL---------------IGSTTEDKGFDVSNTFPEIAGL 320
Query: 403 WKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGL 462
+ A P+L+ + L ++ GLRP PD P++GPV + A GH G+
Sbjct: 321 VQGAVRCVPELQQVNL------KRTWAGLRPGSPDELPILGPVAEVEGYLNACGHFRTGI 374
Query: 463 SLALGTAELVADMVLTNPLKVDSAPF 488
+ T L+ +V L +D APF
Sbjct: 375 LTSAITGVLLDRLVHEETLPLDIAPF 400
>gi|445496475|ref|ZP_21463330.1| D-amino acid dehydrogenase small subunit DadA [Janthinobacterium
sp. HH01]
gi|444786470|gb|ELX08018.1| D-amino acid dehydrogenase small subunit DadA [Janthinobacterium
sp. HH01]
Length = 427
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 183/440 (41%), Gaps = 93/440 (21%)
Query: 84 VIIIGAGIIGLTIARQLL-VGSDLSV-------------AVVDKVVPCSGATGAGQG--- 126
V+I+G+G+IG+T A L G D++V A ++ P + A G
Sbjct: 3 VVILGSGVIGVTSAYYLAQAGHDVTVLDRQPGPALETSFANAGQISPGYASPWAAPGIPL 62
Query: 127 --YIWMVHR------TPGSEIWDLALRSNKLWKML------------------ADSLRD- 159
WM+ R TP ++ L +W+ML A+ RD
Sbjct: 63 KAMKWMLQRHAPLSITPDGTLFQLQW----MWQMLQNCNAERYAVNKERMVRLAEYSRDC 118
Query: 160 -QGLDPLQVIGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPE 216
+ L I + +Q G+ + RT ++L + ++ L E G+ E L+ L+ AEP
Sbjct: 119 FKALRAATGIEYEGRQQGTTQLFRTQKQLDDAAKDIQVLEETGVPYELLNREQLVAAEPG 178
Query: 217 LMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
L + LP D D L + K RY +T L+++ E+
Sbjct: 179 LDQNKLVGGLRLPNDETGDCQLFTTRLTAMAEQLGVKFRYGV----DITGLVKAGE--EI 232
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
+ VQ L + + VVA G +S +L+ DL++ IPV P KG+ + + N+
Sbjct: 233 KGVQCGAE-LVTADSYVVALGAYSTTLLKDLVK-------IPVYPLKGYSITVPIVNA-- 282
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
+ P + I++T D I +G + AGF+T +
Sbjct: 283 ----------------SAAPVSTILDETYKIAVTRFDDRI---RVGGMAEIAGFDTRLNP 323
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + +P D A F + GLRP PDG PV+G GL +F+ TG
Sbjct: 324 RRRETLEMVVNDLFPGAGDTASASFWT------GLRPMTPDGTPVVGRT-GLRNLFINTG 376
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG +++ G+A+L++D++
Sbjct: 377 HGTLGWTMSCGSAQLLSDLI 396
>gi|49615776|gb|AAT67057.1| hydrogen cyanide synthase HcnC [Pseudomonas aeruginosa]
Length = 418
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 178/452 (39%), Gaps = 98/452 (21%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG---- 136
T+D++I G G+IG + A QL +L +AVVD P AT A G +W + + G
Sbjct: 4 TYDIVIAGGGVIGASCAYQLSRRGNLRIAVVDDKRP-GNATRASAGGLWAIGESVGLGCG 62
Query: 137 --------------------------------SEIWDLALRSNKLWKMLADSLRDQ-GLD 163
+DLAL+SN L+ L L ++ G+D
Sbjct: 63 VIFFRMMSSSRNRREAQGAAVAVDASTPHILPPAFFDLALQSNALYPELHRELIERHGMD 122
Query: 164 PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDS 223
+++TG + + E+ + V Q+ + +L +L +AEP +
Sbjct: 123 ----FKFERTGLKYVIQDDEDRQYAEHIVAQIPHLAEQVRWLDREELRRAEPAVSHAAQD 178
Query: 224 RAAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTG------EV 276
FL D Q+ LA AY+E + + V LL +N TG +
Sbjct: 179 ALEFL-CDHQVSPFRLADAYLEAARQ-------------NGVKLLLGTNVTGVLRQGRRI 224
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
V+T + + ++ AAG W+ L + IPVKP KG +++ E L
Sbjct: 225 SGVRTDNAGVLHCRTLINAAGAWAAE-----LSKLATGRRIPVKPVKGQIVLTERMPRLL 279
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
+ Y+ D +G+IL +GS+ + GF+
Sbjct: 280 NGCLTTSDCYMAQKD---------NGEIL---------------IGSTTEDKGFDVGNTF 315
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
I + + A P+L+ + L ++ GLRP PD P++GPV + A G
Sbjct: 316 PEIAGLVQGAVRCVPELQQVNL------KRTWAGLRPGSPDELPILGPVAEVEGYLNACG 369
Query: 457 HEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
H G+ + T L+ +V L +D APF
Sbjct: 370 HFRTGILTSAITGVLLDRLVHEETLPLDIAPF 401
>gi|418613704|ref|ZP_13176706.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU118]
gi|374823089|gb|EHR87097.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU118]
Length = 372
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 186/418 (44%), Gaps = 62/418 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IAR L + L +AV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARH-LSATHLDIAVIDRDVPGKHASYKAGGMLGAQNEFTKDSDLFQ 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ ++ + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANEHDDISSIRRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS DLLQ L GE A +P+D Q++A +A +E + RY
Sbjct: 118 SVKQLSDDDLLQ----LTHGEVKPSYAAIHIPHDGQINAHHYTLALLE--SLKLREIKRY 171
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
A VT + R N +V+T++++ ++VA G WS L+ T+ L
Sbjct: 172 AS---TEVTSIERHNG---YYSVKTNQSSTIEAHKVIVAGGAWSSQLL------TQYHLQ 219
Query: 317 IPVKPRKGHLLVLENFNSLKLNHA-SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
V KG +++LEN N L L M G + P Q N
Sbjct: 220 RQVIGVKGEVILLEN-NDLALTETLFMTNG------CYIVPKQPN--------------- 257
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
++G++ +F ++ +D + A P+L+D + S G+RPY
Sbjct: 258 --RFLIGATSEFNNYSVGTTDEGMDWLLHHAYHRVPQLKDSHILKKWS------GVRPYT 309
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PV+ + +++ +GH G+ L+ +A+ +L+ + F V R
Sbjct: 310 EKEMPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWLLSGIKPSRYSSFTVTRR 365
>gi|418633423|ref|ZP_13195839.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU129]
gi|420190911|ref|ZP_14696849.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM037]
gi|420205310|ref|ZP_14710842.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM015]
gi|374839760|gb|EHS03271.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU129]
gi|394258192|gb|EJE03081.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM037]
gi|394270900|gb|EJE15407.1| putative glycine oxidase ThiO [Staphylococcus epidermidis NIHLM015]
Length = 372
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 176/390 (45%), Gaps = 62/390 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IAR L + L VAV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARH-LSATHLDVAVIDRDVPGKHASYKAGGMLGAQNEFTKDSDLFQ 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ ++ + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANEHDDISSIRRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS DLLQ L GE A +P+D Q++A +A +E + RY
Sbjct: 118 SVKQLSDDDLLQ----LTHGEVKPSYAAIHIPHDGQINAHHYTLALLE--SLKLREIKRY 171
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
A VT + R N +V+T++++ ++VA G WS L+ T+ L
Sbjct: 172 AS---TEVTSIERHNG---YYSVKTNQSSTIEAHKVIVAGGAWSSQLL------TQYHLQ 219
Query: 317 IPVKPRKGHLLVLENFNSLKLNHA-SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
V KG +++LEN N L L M G + P Q N
Sbjct: 220 RQVIGVKGEVILLEN-NDLALTETLFMTNG------CYIVPKQPN--------------- 257
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
++G++ +F ++ +D + A P+L+D + S G+RPY
Sbjct: 258 --RFLIGATSEFNNYSVGTTDEGMDWLLHHAYHRVPQLKDSHILKKWS------GVRPYT 309
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLA 465
PV+ + +++ +GH G+ L+
Sbjct: 310 EKEMPVMDQID--DGLYVISGHYRNGILLS 337
>gi|167838850|ref|ZP_02465627.1| oxidoreductase, FAD-binding family protein [Burkholderia
thailandensis MSMB43]
Length = 203
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 16/176 (9%)
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+V +P++P+KGHLL+ + + + +++H +E GY + S++
Sbjct: 26 LVPGLPLRPKKGHLLITDRYPA-RVSHQLVELGYAA---------SAHASDGTSVAFNVQ 75
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G L++GSSRQF + VE ++ R+ +RA + P L L + + G R
Sbjct: 76 PRPTGQLLIGSSRQFDTEDPRVEAPVLARMLRRALGYLPALAGL------NGIRAWTGFR 129
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P++G P ++LA GHEGLG++ A G+A ++A ++ +D+ P+
Sbjct: 130 AASPDGLPLLGEHPSRRGLWLAVGHEGLGVTTAPGSARVLAALMFGERAAIDAGPY 185
>gi|407071111|ref|ZP_11101949.1| D-amino acid dehydrogenase small subunit [Vibrio cyclitrophicus
ZF14]
Length = 417
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 138/312 (44%), Gaps = 51/312 (16%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R+ ++L +++ +K L E+G+ + L EP L +D +L
Sbjct: 133 RQKGTLQVFRSEKQLDFIQQDMKLLKESGIEHSLFDVAQCLAVEPGLADVKDKLVGGLYL 192
Query: 229 PYDSQLDA-MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
P+D D + EK R G EF T +++ N ++ T+ +
Sbjct: 193 PHDETGDCHQFCLNLTEKAKR----LGVRFEF----DTEVVKLNHQNQIIESITTTQGEF 244
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
A VVA+G +S DLL++ + L IPV P KG+ L L N K
Sbjct: 245 KADAYVVASGSYS----RDLLKQ--VNLTIPVYPVKGYSLTLPIINEEK----------- 287
Query: 348 GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFN---TEVEQTIIDRIWK 404
P + ++MT D I + + + AGF+ E + ID + K
Sbjct: 288 -------SPTSTVMDETYKVAMTRFDDRIR---IAGTAELAGFDYHIPEKRKATIDMVIK 337
Query: 405 RAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
+ +P+ D A++ + GLRP PDG P+IG P + +F TGH LG ++
Sbjct: 338 ---DLFPQAGDFTKAEYWT------GLRPMTPDGTPIIGKTP-IENLFTNTGHGTLGWTM 387
Query: 465 ALGTAELVADMV 476
A G+ +L+A +V
Sbjct: 388 ACGSGKLLASVV 399
>gi|300717007|ref|YP_003741810.1| D-amino acid dehydrogenase small subunit [Erwinia billingiae Eb661]
gi|299062843|emb|CAX59963.1| D-amino acid dehydrogenase, small subunit [Erwinia billingiae
Eb661]
Length = 431
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 190/439 (43%), Gaps = 89/439 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDK---VVPCSGATGAGQ---GYI--WMVHRTP 135
V+I+G+G++G+ A L + V V+D+ V + A AGQ GY W P
Sbjct: 3 VVILGSGVVGVASA-WYLAQAGHEVTVIDRQPGVAMETSAGNAGQISPGYAAPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKML------------------ADSLRD--QG 161
I W LA+R + +W+ML A+ RD +
Sbjct: 62 LKAIKWMFQRHAPLAIRPDGSRFQLEWMWQMLRNCDMHHYQENKSRMVRIAEYSRDCLKA 121
Query: 162 LDPLQVIGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV 219
L I + +Q G+L + RT ++ + + L EAG+ E L ++ L AEP L
Sbjct: 122 LRQQTGIAYEGRQGGTLQLFRTSQQFESATKDIAVLKEAGVPYELLEAAQLADAEPALAT 181
Query: 220 GEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
+ LP D D L + ++ AS G F + PV LL+ + ++
Sbjct: 182 TQHKLTGGLRLPNDETGDCQL---FTQRLAEMAASAGVTFRF-NTPVDALLQEGN--QIT 235
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
V+ T+ + A VVA G +S +L++D+++ +PV P KG+ L + +K
Sbjct: 236 GVKCGAETV-TADAYVVAFGSYSTALLNDIVK-------VPVYPLKGYSLTI----PIKN 283
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
AS P + +++T D I +G + G+NT++
Sbjct: 284 EQAS--------------PVSTVLDETYKVAITRFDDRI---RVGGMAEIVGYNTKLLPA 326
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+ + + YP+ + A F + GLRP PDG P++G P L +FL TGH
Sbjct: 327 RRETLEMVVGDLYPEGGHIEQATFWT------GLRPMTPDGTPIVGRTP-LKNLFLNTGH 379
Query: 458 EGLGLSLALGTAELVADMV 476
LG ++A G+ +L++D++
Sbjct: 380 GTLGWTMACGSGQLLSDII 398
>gi|403045383|ref|ZP_10900860.1| glycine D-amino acid oxidase [Staphylococcus sp. OJ82]
gi|402764955|gb|EJX19040.1| glycine D-amino acid oxidase [Staphylococcus sp. OJ82]
Length = 374
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 183/386 (47%), Gaps = 52/386 (13%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIW 140
+DVIIIG+G++G++IAR+ L SD+ +AV+D+ +P A+ G + + T S+++
Sbjct: 2 YDVIIIGSGVMGMSIARE-LSKSDIKIAVIDRDIPGKHASFKAGGMLGAQNEFTEDSDLF 60
Query: 141 DLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
+A ++ ++++ L DSL D+ GLD I + +G + I + ++ ++++ K L +
Sbjct: 61 HIARQAQEMFEPLRDSLLDEVGLD----IEYLDSGLIKIASSIDDNASVEKQYKFLQQYN 116
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
E L++ L + ++ ++ A ++P D+Q++A Y + + +G +
Sbjct: 117 RALELLTAKSLKERTNGNVISDNLSAMYIPNDNQINAN---KYTKALLKSLEQRGIH-RI 172
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
Y+ V+ + N V T + L ++K +VVA G WSG L+ + + V
Sbjct: 173 YNTEVSDITPLNPGYR---VVTDTDVLTAEK-VVVAGGAWSGKLLSHYMPNSS------V 222
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
KG +L++E+ N S+E + + P N
Sbjct: 223 TGVKGEVLLVEHPN------LSLETTLFTTNGCYVVPKMKNR-----------------Y 259
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++G++ F ++ V Q + ++A PKLRD L + S G+RPY K
Sbjct: 260 LIGATSYFDDYSVGVSQLGKKWLLQQATTHIPKLRDGKLINQWS------GIRPYTSGEK 313
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLA 465
P++ + +F+ +GH G+ L+
Sbjct: 314 PIMDEID--KHLFIISGHYRNGILLS 337
>gi|392970648|ref|ZP_10336052.1| glycine oxidase ThiO [Staphylococcus equorum subsp. equorum Mu2]
gi|392511347|emb|CCI59275.1| glycine oxidase ThiO [Staphylococcus equorum subsp. equorum Mu2]
Length = 374
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 183/386 (47%), Gaps = 52/386 (13%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIW 140
+DVIIIG+G++G++IAR+ L SD+ +AV+D+ +P A+ G + + T S+++
Sbjct: 2 YDVIIIGSGVMGMSIARE-LSKSDIKIAVIDRDIPGKHASFKAGGMLGAQNEFTEDSDLF 60
Query: 141 DLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
+A ++ ++++ L DSL D+ GLD I + +G + I + ++ ++++ K L +
Sbjct: 61 HIARQAQEMFEPLRDSLLDEVGLD----IEYLDSGLIKIASSIDDNASVEKQYKFLQQYN 116
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
E L++ L + ++ ++ A ++P D+Q++A Y + + +G +
Sbjct: 117 RALELLTAKSLKERTNGNVISDNLSAMYIPNDNQINAN---KYTKALLKSLEQRGIH-RI 172
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
Y+ V+ + N V T + L ++K +VVA G WSG L+ + + V
Sbjct: 173 YNTEVSDITPLNPGYR---VVTDTDVLTAEK-VVVAGGAWSGKLLSHYMPNSS------V 222
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
KG +L++E+ N S+E + + P N
Sbjct: 223 TGVKGEVLLVEHPN------LSLETTLFTTNGCYVVPKMKNR-----------------Y 259
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++G++ F ++ V Q + ++A PKLRD L + S G+RPY K
Sbjct: 260 LIGATSYFDDYSVGVSQLGKKWLLQQATTHIPKLRDGKLINQWS------GIRPYTSGEK 313
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLA 465
P++ + +F+ +GH G+ L+
Sbjct: 314 PIMDEID--KHLFIISGHYRNGILLS 337
>gi|417544028|ref|ZP_12195114.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC032]
gi|421666935|ref|ZP_16107017.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC087]
gi|421670791|ref|ZP_16110775.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC099]
gi|400381916|gb|EJP40594.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC032]
gi|410383671|gb|EKP36198.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC099]
gi|410386407|gb|EKP38878.1| putative glycine oxidase ThiO [Acinetobacter baumannii OIFC087]
Length = 371
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 169/414 (40%), Gaps = 63/414 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V V++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCKVSIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ R+
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLIRYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F + V L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFENTAVKKLIQQGDA--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+IPV+P +G +L+ + P ++ M +
Sbjct: 218 EIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G++V GSS GF+T ++T I + E P+L D + + GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPELADFPIVQRWA------GLRPSS 307
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 308 PNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|169634021|ref|YP_001707757.1| D-amino acid oxidase [Acinetobacter baumannii SDF]
gi|169152813|emb|CAP01836.1| putative D-amino acid oxidase [Acinetobacter baumannii]
Length = 371
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 172/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + E + A Y +L + ++ +
Sbjct: 110 QEPIQRCEYLQRDALEQVNPH--ISEQFQEAI--YFPELSNIRNPRVLQSLISYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H V L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHAAVKKLIQQGDV--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLKL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+IPV+P +G +L+ + P ++ M +
Sbjct: 218 EIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+T ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|427426282|ref|ZP_18916343.1| putative glycine oxidase ThiO [Acinetobacter baumannii WC-136]
gi|425696914|gb|EKU66609.1| putative glycine oxidase ThiO [Acinetobacter baumannii WC-136]
Length = 371
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 169/414 (40%), Gaps = 63/414 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTLSIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPITGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL +L Q P + E + A Y +L + ++ +
Sbjct: 110 QEPMQRCEYLQRDELEQVNPH--ISEQFQEAI--YFPELSNIRNPRVLQSLISYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F V L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFERAAVKKLIQHGDA--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
DIPV+P +G +L+ + P ++ M +
Sbjct: 218 DIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G++V GSS GF+T ++T I + E P+L D + + GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPELADFPIVQRWA------GLRPSS 307
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 308 PNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|32423746|gb|AAP81270.1| putative D-amino acid oxidase [Pseudomonas aeruginosa PA14]
Length = 358
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 175/417 (41%), Gaps = 69/417 (16%)
Query: 86 IIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSEIW 140
++GAG+IGL AR+L + + L V +V++ A+ AG G Y W +
Sbjct: 1 MVGAGVIGLLTARELAL-AGLRVTLVERGESGREASWAGGGIVSPLYPWRYS----PAVT 55
Query: 141 DLALRSNKLWKMLADSLRDQ-GLDP-LQVIG--WKQTGSLLIGRTPEELVMLKERVKQLC 196
LA S + L L D+ GLDP + +G W L + E L + + L
Sbjct: 56 ALAHWSQDFYPALGQRLLDETGLDPEVHTVGLYW-----LDLDDQTEALQWARNHTRPLK 110
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRY 256
E + Y A P L G RA ++ + + + + FA+ +
Sbjct: 111 EVPIEEAY-------AAVPGLGAGF-QRAVYMSGVANVRNPRLARSLRASLQQFANLELH 162
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
+ V LR V V TS+ + K +++AAG WSG L+ L L+
Sbjct: 163 EQ---TEVRGWLRDGD--RVVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLE 210
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
+PV P KG +++ Y D +L+ A
Sbjct: 211 LPVVPVKGQMIL-----------------YKCAADFLPR-------MVLAKGRYAIPRRD 246
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
G++++GS+ + +GF+ ++ + AAE P+L D+ + GLRP P
Sbjct: 247 GHILIGSTLEHSGFDKTPTDEALESLRASAAELLPELADMQPVAHWA------GLRPGSP 300
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
+G P IGPVPG ++L TGH GL LA + L+AD++ +D AP+A GR
Sbjct: 301 EGIPYIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADLMSGREPIIDPAPYAPAGR 357
>gi|344343476|ref|ZP_08774344.1| glycine oxidase ThiO [Marichromatium purpuratum 984]
gi|343804899|gb|EGV22797.1| glycine oxidase ThiO [Marichromatium purpuratum 984]
Length = 362
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 175/421 (41%), Gaps = 79/421 (18%)
Query: 83 DVIIIGAGIIGLTIARQLL-VGSDLSVAVVDKVVPCSGATGAG---QGYIWMVHRTPGSE 138
++++IG G+IGL AR+L G D ++ + K S G G Y W R P +
Sbjct: 3 EILVIGGGVIGLLTARELAHAGVDTTLVEMGKTGQQSSWAGGGILSPLYPW---RYPDA- 58
Query: 139 IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCE 197
+ LA S ++ LA L D+ G+DP + G L++ +ER + L
Sbjct: 59 VGRLAAWSQAVYPALATELLDETGVDPELTV----NGMLVLD--------TEERQRALDW 106
Query: 198 AGLR---AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQL-DAMLAVAYIEKGNRHFASK 253
A E L S L +EPEL +A LP Q+ + L A R +
Sbjct: 107 AARHDTAIEVLDSRQLHASEPELGP-RPEQALLLPGIGQVRNPRLTRALRRAIERKVTLR 165
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
+ V LL G V+T K + +++ +++ AG W+ L+ L EI
Sbjct: 166 ------EQEEVLELLIEG--GRAVGVRTPKGEIRAER-VIICAGAWTAKLLEQLGNSPEI 216
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
+P +G +++ PGQV+H I++
Sbjct: 217 ------QPVRGQMILF-----------------------YAQPGQVHH-----ITLHRER 242
Query: 374 DVI----GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI 429
+I G ++ GS+ + AGF + +++ A E YP L+ + D S
Sbjct: 243 YIIPRRDGRILFGSTLEQAGFVKRTTAEAKEELYRAAVELYPLLKRTPIEDHWS------ 296
Query: 430 GLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
GLRP P G P IG PG+ ++ GH GL +A L+ D+VL +D+AP+A
Sbjct: 297 GLRPGSPSGIPYIGAYPGIDGLYFNAGHYRNGLVTGPASARLLTDLVLERAPILDAAPYA 356
Query: 490 V 490
+
Sbjct: 357 L 357
>gi|183599315|ref|ZP_02960808.1| hypothetical protein PROSTU_02780 [Providencia stuartii ATCC 25827]
gi|386741565|ref|YP_006214744.1| D-amino acid dehydrogenase small subunit [Providencia stuartii MRSN
2154]
gi|188021550|gb|EDU59590.1| D-amino acid dehydrogenase small subunit [Providencia stuartii ATCC
25827]
gi|384478258|gb|AFH92053.1| D-amino acid dehydrogenase small subunit [Providencia stuartii MRSN
2154]
Length = 433
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 182/453 (40%), Gaps = 89/453 (19%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQ------GYI--WMVHRTP 135
V+++GAG+IG+T A L V V+D+ + + T AG GY W P
Sbjct: 3 VLVLGAGVIGVTTA-WYLAQEGHEVTVLDRQMDVAEETSAGNAGQISPGYATPWGAPGIP 61
Query: 136 GSEI-W------DLALRSNK-------LWKMLA----------------------DSLRD 159
+ W LA+R + +W+ML D +R
Sbjct: 62 LKAVKWMFEKHAPLAIRPDGTLFQLRWMWQMLKNCDIQHYAMNKSRMVRIAEYSRDCIRQ 121
Query: 160 QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV 219
D +Q G+L + RT ++ + L + G+ E L++++L +AEP L
Sbjct: 122 LRADTGISYEGRQGGTLQLFRTEKQFDNAANDIAVLQKEGVPYELLTANELAKAEPALEY 181
Query: 220 GEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
+D LP D D + K + K ++ +T +V
Sbjct: 182 VKDKLTGGLRLPNDETGDCQQFTKKLAKMAQDAGVKFQFGRHVEQILT------DGNKVS 235
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
++ L + + VVA G +S SL+H+L++ IPV P KG+ L + N+ +
Sbjct: 236 GIRCDGEILQADR-YVVAMGSYSTSLLHNLVK-------IPVYPLKGYSLTMPIINAER- 286
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
P + I++T D I +G + GFN +V +
Sbjct: 287 -----------------APTSTVLDETYKIAVTRFDDRI---RVGGMAEVVGFNLDVLKK 326
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+ + + Y D+ A F + GLRP PDG P++GP S ++L TGH
Sbjct: 327 RCETLKMVVQDLYQGGGDISQATFWT------GLRPMTPDGTPIVGPT-AYSNLYLNTGH 379
Query: 458 EGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
LG ++A G+ +L+AD++ N + S +V
Sbjct: 380 GTLGWTMACGSGKLLADLISGNKPDIASDDLSV 412
>gi|308187069|ref|YP_003931200.1| D-amino acid dehydrogenase subunit [Pantoea vagans C9-1]
gi|308057579|gb|ADO09751.1| D-amino acid dehydrogenase subunit [Pantoea vagans C9-1]
Length = 433
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 44/308 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++ + + L +AG+ E L + +L + EP L + L
Sbjct: 133 RQGGTLQLFRTQQQFDSASKDIAVLRDAGVPYELLEAHELSRVEPALAATQHKLTGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + K A + ++ PV LLR + + V+ + +
Sbjct: 193 PNDETGDCQLFTQRLAK----MAEEAGVVFRFNTPVDHLLRDGN--RIYGVKCGEEII-K 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
+ VVA G +S +L+ + V+DIPV P KG+ L + N EA
Sbjct: 246 ADSYVVAFGSYSTALLKN-------VIDIPVYPLKGYSLTIPIKNP--------EAA--- 287
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
P + +++T D I +G + GFNT + + + + ++
Sbjct: 288 -------PVSTILDETYKVAVTRFDDRI---RVGGMAEIVGFNTRLTEARRETLEMVVSD 337
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
YP+ L A F + GLRP PDG P++G P LS ++L TGH LG ++A G+
Sbjct: 338 LYPEGGHLAQASFWT------GLRPMTPDGTPIVGATP-LSNLYLNTGHGTLGWTMACGS 390
Query: 469 AELVADMV 476
+L+AD++
Sbjct: 391 GQLLADLI 398
>gi|441502962|ref|ZP_20984969.1| D-amino acid dehydrogenase small subunit [Photobacterium sp. AK15]
gi|441429178|gb|ELR66633.1| D-amino acid dehydrogenase small subunit [Photobacterium sp. AK15]
Length = 423
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 187/446 (41%), Gaps = 93/446 (20%)
Query: 82 FDVIIIGAGIIGLTIARQL-LVGSDLSVAVVDKVVPCSGAT---GAGQ---GYI------ 128
+VI++G G+IGLT A L L G D V VV++ + T AGQ GY
Sbjct: 1 MEVIVLGCGVIGLTSAWYLALAGHD--VTVVERQSRSAEETSFANAGQISYGYSSPWAAP 58
Query: 129 --------WMVHR----------TPGSEIWDLALRSN--------KLWKML--ADSLRD- 159
W++ + +P +W + +N +ML A+ RD
Sbjct: 59 GIPLKAMKWLLQKHAPFKIKPSVSPELYVWASKMLANCNQEKYQINKARMLRIANYSRDC 118
Query: 160 -QGLDPLQVIGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPE 216
Q L Q + + +Q G+L + R+ ++ + + +K L ++G R + L + + EP
Sbjct: 119 LQELRQQQKLNYEGRQKGTLQVFRSEAQVEAVAKDIKVLADSGTRYQLLDVAGCIDVEPA 178
Query: 217 L--MVGEDSRAAFLPYDSQLDAML----AVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS 270
L + G+ +LP D D L A E+ F H
Sbjct: 179 LAKVKGKLVGGLYLPDDETGDCYLFCQQLTALAEQAGVRFMFDTEVHRLIH--------- 229
Query: 271 NSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLE 330
G++ +VQT L + A VVA GC+S S++ L ++ +D+PV P KG+ L +
Sbjct: 230 -QDGKITSVQTRAGELKAD-AYVVAMGCYSVSVLASLGLSSQ-GMDMPVYPVKGYSLTMP 286
Query: 331 NFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGF 390
V DL P + ++MT + I + + + AGF
Sbjct: 287 ----------------VAEPDLA--PQSTVMDETYKVAMTRFDNRIR---VAGTAELAGF 325
Query: 391 NTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSK 450
+ + + I + +P+ D+ +F + GLRP PDG PVIG P +
Sbjct: 326 DLSLSEKRKATIAMVIQDLFPQGGDISKTEFWT------GLRPMTPDGTPVIGRTP-YAN 378
Query: 451 VFLATGHEGLGLSLALGTAELVADMV 476
+F TGH LG ++A G+ L+AD+V
Sbjct: 379 LFTNTGHGTLGWTMACGSGRLLADIV 404
>gi|319652697|ref|ZP_08006807.1| sarcosine oxidase beta subunit [Bacillus sp. 2_A_57_CT2]
gi|317395602|gb|EFV76330.1| sarcosine oxidase beta subunit [Bacillus sp. 2_A_57_CT2]
Length = 357
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 170/383 (44%), Gaps = 72/383 (18%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V V+DK P SG +G+ Q ++W+ ++TP S + ++ S +L+ L+ + D
Sbjct: 31 VLVLDKKYPMSGTSGSTQAWVWVHNKTP-SWYAEFSMYSAELYPYLSKKIGD-------- 81
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEA----GLRAEYLSSSDLLQAEPELMVGEDS 223
+ +K+TG L +P +E+ ++L E+ G++ + LS ++L+ EP M E +
Sbjct: 82 VEYKRTGGL----SPFFNESDREKAQKLAESYRKIGIKIKVLSREEVLEKEP-YMNPEVA 136
Query: 224 RAAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS 282
A + D ++ L Y+ R+ RY+ + + VT + + + T V S
Sbjct: 137 GATYSSIDGNVNPFRLIDMYMRAAKRNGV---RYSAY--NKVTEIKKQDGTYLV----VS 187
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNS-LKLNHAS 341
+ K +++A G WS + D+L + IPV +G +LV E L +
Sbjct: 188 DKGAFKCKNLILAGGTWSREI-GDMLG-----VKIPVNQLRGQILVSEPMKPFLNFTISG 241
Query: 342 MEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDR 401
+ Q N+G++L +G S + AGFN +I
Sbjct: 242 LR--------------QANNGEVL---------------MGYSMEEAGFNRATTLDVIQE 272
Query: 402 IWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLG 461
A ++ P LR + S G+R DG P++G VPG +++A H G+
Sbjct: 273 TANMAVQYVPGLRKAKIVRAFS------GIRAMPEDGFPILGKVPGHESLYVAATHSGVT 326
Query: 462 LSLALGT--AELVADMVLTNPLK 482
LS +GT EL+ + + P++
Sbjct: 327 LSPLIGTLITELITEGETSIPIE 349
>gi|329113262|ref|ZP_08242045.1| D-amino acid dehydrogenase small subunit [Acetobacter pomorum
DM001]
gi|326697403|gb|EGE49061.1| D-amino acid dehydrogenase small subunit [Acetobacter pomorum
DM001]
Length = 419
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 186/450 (41%), Gaps = 90/450 (20%)
Query: 84 VIIIGAGIIGLTIA--------------RQLLVGSDLSVAVVDKVVPCSGATGAGQG--- 126
++++G+G++G+T A RQ G + S A +V P A AG G
Sbjct: 3 ILVLGSGVVGVTSAWYLAKAGHEVTVVDRQPEAGMETSFANAGQVSPGYSAPWAGPGVPL 62
Query: 127 ----YIWMVHR------TPGSEIWDLAL------------RSNKLWKMLADSLRDQGLDP 164
++ M +R P +W L R+ LA+ RD D
Sbjct: 63 KSISWLMMKYRPFVFWPIPDPHLWKWLLQMLENCTAAAYDRNKGRMVRLAEYSRDVMQDL 122
Query: 165 LQVIGW----KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVG 220
G +Q G+L + RT ++L + + L + + E L + AEP L+
Sbjct: 123 RSSTGITYDDRQQGTLQVFRTQKQLDATAKDIAVLKQYNVPYELLDVEGCVAAEPGLVAS 182
Query: 221 EDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYA--EFYHDPVTCLLRSNSTGEV 276
LP D DA K + AS + A +F +D V +RS S G V
Sbjct: 183 RQKIVGGLRLPGDETGDAF-------KFTQRLASMAQEAGVKFLYDTVVRRIRSES-GRV 234
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
V+TS L + + V++ G +S +L+ L +D+PV P KG+ L
Sbjct: 235 TGVETSHGVL-TADSYVLSLGSFSPALLRPL------GIDLPVYPVKGYSLT-------- 279
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
AS++ + P + I +T D + +G + + AGF+ + +
Sbjct: 280 ---ASIQ-------NADAAPVSTIMDETFKIGITRLGD---RVRIGGTAELAGFSRRLRK 326
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + +P D+ A F + GLRP PDG PVIG GL +FL TG
Sbjct: 327 PRRETLEHSVTDLFPGCCDVEQALFWT------GLRPMTPDGTPVIGRT-GLDNLFLNTG 379
Query: 457 HEGLGLSLALGTAELVADMVLTNPLKVDSA 486
H LG ++A G+ +++AD++ +D+A
Sbjct: 380 HGTLGWTMACGSGKVLADLMSNKKPDIDTA 409
>gi|387889095|ref|YP_006319393.1| D-amino acid dehydrogenase small subunit [Escherichia blattae DSM
4481]
gi|414595177|ref|ZP_11444806.1| D-amino acid dehydrogenase small subunit [Escherichia blattae NBRC
105725]
gi|386923928|gb|AFJ46882.1| d-amino acid dehydrogenase small subunit [Escherichia blattae DSM
4481]
gi|403193852|dbj|GAB82458.1| D-amino acid dehydrogenase small subunit [Escherichia blattae NBRC
105725]
Length = 438
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 135/322 (41%), Gaps = 44/322 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL--MVGEDSRAAFL 228
+Q G+L + RT ++ + L EAG+ + L +S L Q EP L + G+ + L
Sbjct: 133 RQGGTLQLFRTAQQFENAARDIDVLKEAGVPYQLLEASALGQVEPALAQVAGKLTGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + H A + ++ V+ LL T + V+ + +
Sbjct: 193 PNDETGDCQL----FTRNLAHMAEQAGVTFRFNTAVSELLHDGQT--ITGVRCGGEVIRA 246
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A V+A G WS L+H L+ DIPV P KG+ L +
Sbjct: 247 D-AYVMAFGSWSTGLLHGLV-------DIPVYPLKGYSLTIP------------------ 280
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
+T G + A T + +G + GFN E+ + + +
Sbjct: 281 ---ITDPQGAPVSTVLDETYKIAITRFDQRIRVGGMAEIVGFNRELLARRRETLEMVVRD 337
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
YP+ D+ A F + GLRP PDG P+IG P L ++L TGH LG ++A G+
Sbjct: 338 LYPRGGDISQATFWT------GLRPMTPDGTPIIGRTP-LKNLWLNTGHGTLGWTMACGS 390
Query: 469 AELVADMVLTNPLKVDSAPFAV 490
+L++D+V + S AV
Sbjct: 391 GQLLSDLVSGRTPAIQSDDLAV 412
>gi|319653950|ref|ZP_08008044.1| glycine oxidase ThiO [Bacillus sp. 2_A_57_CT2]
gi|317394486|gb|EFV75230.1| glycine oxidase ThiO [Bacillus sp. 2_A_57_CT2]
Length = 379
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 183/402 (45%), Gaps = 61/402 (15%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI-WMVHRTPGSEIW 140
+D +I+G GI G +IA QL VAV+DK A+GA G + ++
Sbjct: 5 YDAVIVGGGINGSSIAFQL-AKRGYKVAVLDKGKIAGKASGAAAGILGAQTELAEDGPLF 63
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQV-IGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
LA +S ++++L L D QV IG++ G + EE LK ++ +AG
Sbjct: 64 QLACKSRSMYRILIPELEDLS----QVHIGYQNKGVYKVAANKEEEQTLKRLIESQQKAG 119
Query: 200 LRAEYLSSSDLLQAEPEL---MVGEDSRAAFLPYDSQLDAM-LAVAYIEKGNRHFASKGR 255
+AE+ S DL++ EP + ++G A ++P D Q+ A L++A+ + AS
Sbjct: 120 EQAEWFSIDDLIKREPSVSNKLLG----AMYIPNDGQVQAYELSLAFAK------ASMAL 169
Query: 256 YAEFY-HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
AE Y + V+ + + +V V+TS+ ++ +++VA+G WS ++
Sbjct: 170 GAEIYEYTHVSDFILKDE--KVHGVKTSQGEFLAE-SVIVASGAWSREVLE------RAG 220
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
L +P+ P KG + + + G + H + P Q
Sbjct: 221 LSLPIIPVKGECFSV-------IPEKPLVQGTIFSHGCYIVPKQS--------------- 258
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
G LV+G++ + F+ +V I + ++A P D+ A++ + G+RP
Sbjct: 259 --GRLVVGATVKVNSFDEKVTLEGISTLMEKAQNLVP---DIAKAEW---ERAWTGIRPQ 310
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
DG+P +G P +++A GH G+ LA T L+AD++
Sbjct: 311 SADGQPFLGEHPVYRGLYIAAGHFRNGILLAPATGVLMADIL 352
>gi|258543550|ref|YP_003188983.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-01]
gi|384043468|ref|YP_005482212.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-12]
gi|384051985|ref|YP_005479048.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-03]
gi|384055094|ref|YP_005488188.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-07]
gi|384058327|ref|YP_005490994.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-22]
gi|384060968|ref|YP_005500096.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-26]
gi|384064260|ref|YP_005484902.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-32]
gi|384120273|ref|YP_005502897.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|421849940|ref|ZP_16282911.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
NBRC 101655]
gi|256634628|dbj|BAI00604.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-01]
gi|256637684|dbj|BAI03653.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-03]
gi|256640738|dbj|BAI06700.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-07]
gi|256643793|dbj|BAI09748.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-22]
gi|256646848|dbj|BAI12796.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-26]
gi|256649901|dbj|BAI15842.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-32]
gi|256652891|dbj|BAI18825.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256655945|dbj|BAI21872.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-12]
gi|371459249|dbj|GAB28114.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
NBRC 101655]
Length = 419
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 185/450 (41%), Gaps = 90/450 (20%)
Query: 84 VIIIGAGIIGLTIA--------------RQLLVGSDLSVAVVDKVVPCSGATGAGQG--- 126
++++G+G++G+T A RQ G + S A +V P A AG G
Sbjct: 3 ILVLGSGVVGVTSAWYLAKAGHEVTVVDRQPEAGMETSFANAGQVSPGYSAPWAGPGVPL 62
Query: 127 ----YIWMVHR------TPGSEIWDLAL------------RSNKLWKMLADSLRDQGLDP 164
++ M +R P +W R+ LA+ RD D
Sbjct: 63 KSISWLLMKYRPFVFWPMPDPHLWKWLFQMLENCTAAAYDRNKGRMVRLAEYSRDVMQDL 122
Query: 165 LQVIGW----KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVG 220
G +Q G+L + RT ++L + + L + + E L + AEP L
Sbjct: 123 RATTGITYDDRQQGTLQVFRTQKQLDATAKDIAVLKQYNVPYELLDVDGCVTAEPGLAAS 182
Query: 221 EDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYA--EFYHDPVTCLLRSNSTGEV 276
LP D DA K + AS + A +F +D V +RS S G V
Sbjct: 183 RHKIVGGLRLPGDETGDAF-------KFTQRLASMAQEAGVKFLYDTVVRRIRSES-GRV 234
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
V+TS+ L + + V++ G +S +L+ L +D+PV P KG+ L
Sbjct: 235 TGVETSRGVL-TADSYVLSLGSFSPALLRPL------GIDLPVYPVKGYSLT-------- 279
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
AS++ + P + I +T D + +G + + AGF+ + +
Sbjct: 280 ---ASIQ-------NADAAPVSTIMDETFKIGITRLGD---RVRIGGTAELAGFSRRLRK 326
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + +P D+ A F + GLRP PDG PVIG GL +FL TG
Sbjct: 327 PRRETLEHSVTDLFPGCCDVGQALFWT------GLRPMTPDGTPVIGRT-GLDNLFLNTG 379
Query: 457 HEGLGLSLALGTAELVADMVLTNPLKVDSA 486
H LG ++A G+ +++AD++ +D+A
Sbjct: 380 HGTLGWTMACGSGKVLADLMSNKKPDIDTA 409
>gi|262280007|ref|ZP_06057792.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262260358|gb|EEY79091.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 371
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 168/414 (40%), Gaps = 63/414 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V ++++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLSPVTGIDFEIHDTGMLIFDE--EDFDVGLSYTNQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ +
Sbjct: 110 QEPMQRCEYLQRDALEQINPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLISYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H V L++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHSAVKKLIQHGDV--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+IPV+P +G +L+ + P ++ M +
Sbjct: 218 EIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G++V GSS GF+T ++T I + E P+L + + + GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPELANFPIVQRWA------GLRPSS 307
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 308 PNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 361
>gi|392968714|ref|ZP_10334130.1| FAD dependent oxidoreductase [Fibrisoma limi BUZ 3]
gi|387843076|emb|CCH56184.1| FAD dependent oxidoreductase [Fibrisoma limi BUZ 3]
Length = 416
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 153/369 (41%), Gaps = 56/369 (15%)
Query: 129 WMVHRTPGSE--------IWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGR 180
W+ HR + + DL+L S KL++ A+ + G+ GW++ G L++ +
Sbjct: 89 WLFHRNATASHVERSIPVLRDLSLLSKKLYQDFAN---NSGI----AFGWEERGLLMLYK 141
Query: 181 TPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAV 240
TPE + E +AG+ A LS + EPE V A + P D+ + +
Sbjct: 142 TPEAEHEMAEEAAVANKAGIDAHVLSPQQVQDLEPETHVTVRG-AVYYPGDAHIYPNQLI 200
Query: 241 AYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300
+ R R H+ VT G ++AV T Y +V+AAG WS
Sbjct: 201 RQLINELRRMGVSIRE----HEAVTDFRLEQ--GRIKAVVTQAGH-YEFDEVVLAAGAWS 253
Query: 301 GSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVN 360
L L L +P++ KG+ +L T P V
Sbjct: 254 PELTKKL------GLSLPLQGGKGYSFML-----------------------TEPPATVR 284
Query: 361 HGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLAD 420
I+ + T + G+L + + + AG + V + I + ++YP+L
Sbjct: 285 VPAIMLEARATATPMNGHLRIAGTLEIAGTDLSVNPNRVRGIVQSVNQYYPELP----VA 340
Query: 421 FISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNP 480
+ V GLRP PDG P IG V L V LATGH +G+SL T +LVA+++ +
Sbjct: 341 MPATETVWRGLRPCSPDGLPYIGRVNHLRNVTLATGHGMMGVSLGPATGKLVAEVINSQA 400
Query: 481 LKVDSAPFA 489
+ + PF+
Sbjct: 401 VSLPMEPFS 409
>gi|421852809|ref|ZP_16285493.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371478969|dbj|GAB30696.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 419
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 185/450 (41%), Gaps = 90/450 (20%)
Query: 84 VIIIGAGIIGLTIA--------------RQLLVGSDLSVAVVDKVVPCSGATGAGQG--- 126
++++G+G++G+T A RQ G + S A +V P A AG G
Sbjct: 3 ILVLGSGVVGVTSAWYLAKAGHEVTVVDRQPEAGMETSFANAGQVSPGYSAPWAGPGVPL 62
Query: 127 ----YIWMVHR------TPGSEIWDLAL------------RSNKLWKMLADSLRDQGLDP 164
++ M +R P +W R+ LA+ RD D
Sbjct: 63 KSISWLLMKYRPFVFWPMPDPHLWKWLFQMLENCTAAAYDRNKGRMVRLAEYSRDVMQDL 122
Query: 165 LQVIGW----KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVG 220
G +Q G+L + RT ++L + + L + + E L + AEP L
Sbjct: 123 RATTGITYDDRQQGTLQVFRTQKQLDATAKDIAVLKQYNVPYELLDVDGCVAAEPGLAAS 182
Query: 221 EDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYA--EFYHDPVTCLLRSNSTGEV 276
LP D DA K + AS + A +F +D V +RS S G V
Sbjct: 183 RQKIVGGLRLPGDETGDAF-------KFTQRLASMAQEAGVKFLYDTVVRRIRSES-GRV 234
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
V+TS+ L + + V++ G +S +L+ L +D+PV P KG+ L
Sbjct: 235 TGVETSRGVL-TADSYVLSLGSFSPALLRPL------GIDLPVYPVKGYSLT-------- 279
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
AS++ + P + I +T D + +G + + AGF+ + +
Sbjct: 280 ---ASIQ-------NADAAPVSTIMDETFKIGITRLGD---RVRIGGTAELAGFSRRLRK 326
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + +P D+ A F + GLRP PDG PVIG GL +FL TG
Sbjct: 327 PRRETLEHSVTDLFPGCCDVEQALFWT------GLRPMTPDGTPVIGRT-GLDNLFLNTG 379
Query: 457 HEGLGLSLALGTAELVADMVLTNPLKVDSA 486
H LG ++A G+ +++AD++ +D+A
Sbjct: 380 HGTLGWTMACGSGKVLADLMSNKKPDIDTA 409
>gi|416877392|ref|ZP_11919792.1| putative glycine/D-amino acid oxidase [Pseudomonas aeruginosa
152504]
gi|334839639|gb|EGM18317.1| putative glycine/D-amino acid oxidase [Pseudomonas aeruginosa
152504]
Length = 357
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 174/416 (41%), Gaps = 69/416 (16%)
Query: 87 IGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSEIWD 141
+GAG+IGL AR+L + + L V +V++ A+ AG G Y W +
Sbjct: 1 MGAGVIGLLTARELAL-AGLRVTLVERGESGREASWAGGGIVSPLYPWRYS----PAVTA 55
Query: 142 LALRSNKLWKMLADSLRDQ-GLDP-LQVIG--WKQTGSLLIGRTPEELVMLKERVKQLCE 197
LA S + L L D+ GLDP + +G W L + E L + + L E
Sbjct: 56 LAHWSQDFYPALGQRLLDETGLDPEVHTVGLYW-----LDLDDQTEALQWARNHTRPLKE 110
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
+ Y A P L G RA ++ + + + + FA+ +
Sbjct: 111 VPIEEAY-------AAVPGLGAGF-QRAVYMSGVANVRNPRLARSLRASLQQFANLELHE 162
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
+ V LR V V TS+ + K +++AAG WSG L+ L L++
Sbjct: 163 Q---TEVRGWLRDGD--RVVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLEL 210
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
PV P KG +++ Y D +L+ A G
Sbjct: 211 PVVPVKGQMIL-----------------YKCAADFLPR-------MVLAKGRYAIPRRDG 246
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
++++GS+ + +GF+ ++ + AAE P+L D+ + GLRP P+
Sbjct: 247 HILIGSTLEHSGFDKTPTDEALESLRASAAELLPELADMQPVAHWA------GLRPGSPE 300
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
G P IGPVPG ++L TGH GL LA + L+AD++ +D AP+A GR
Sbjct: 301 GIPYIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADLMSGRESIIDPAPYAPAGR 356
>gi|418632409|ref|ZP_13194841.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU128]
gi|374832707|gb|EHR96416.1| glycine oxidase ThiO [Staphylococcus epidermidis VCU128]
Length = 372
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 186/418 (44%), Gaps = 62/418 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IAR L + L +AV+D+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARH-LSATHLDIAVIDRDVPGKHASYKAGGMLGAQNEFTKDSDLFQ 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L+ SL D+ G+D I +K +G + I +++ ++ + + L
Sbjct: 62 LAIESRAMFPQLSKSLLDETGID----IQFKNSGLIKIANEHDDISSIRRQYQFLNSQDR 117
Query: 201 RAEYLSSSDLLQAEPELMVGE---DSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRY 256
+ LS +LLQ L GE A +P+D Q++A +A +E + RY
Sbjct: 118 SVKQLSDDNLLQ----LTHGEVKPSYAAIHIPHDGQINAHHYTLALLE--SLKLREIKRY 171
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
A VT + R N +V+T++++ ++VA G WS L+ T+ L
Sbjct: 172 AS---TEVTSIERHNG---YYSVKTNQSSTIEAHKVIVAGGAWSSQLL------TQYHLQ 219
Query: 317 IPVKPRKGHLLVLENFNSLKLNHA-SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
V KG +++LEN N L L M G + P Q N
Sbjct: 220 RQVIGVKGEVILLEN-NDLALTETLFMTNG------CYIVPKQPN--------------- 257
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
++G++ +F ++ +D + A P+L+D + S G+RPY
Sbjct: 258 --RFLIGATSEFNNYSVGTTDEGMDWLLHHAYHRVPQLKDSHILKKWS------GVRPYT 309
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
PV+ + +++ +GH G+ L+ +A+ +L+ + F V R
Sbjct: 310 EKEMPVMDQID--DGLYVISGHYRNGILLSPIIGRDIANWLLSGIKPSRYSSFTVTRR 365
>gi|293608995|ref|ZP_06691298.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829568|gb|EFF87930.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 371
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 171/415 (41%), Gaps = 65/415 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIW-MVHRTPGS 137
+ IIGAGI GL A +L V V++ D+ A+ AG G Y W VH +
Sbjct: 3 IAIIGAGISGLMSALEL-VEQGCKVSIFDQQQAGQAASWAGGGILSPMYPWRYVHAV--N 59
Query: 138 EIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQL 195
++ S + W +Q L P+ I ++ TG L+ E+ + +Q
Sbjct: 60 QLAQFGKASYQAW--------NQKLYPVTGIDFEIHDTGMLIFDE--EDFDVGLSYAEQH 109
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E R EYL L Q P + + A + P +L + ++ +
Sbjct: 110 QEPMQRCEYLQRDALEQVNPHI-SDQFQEAIYFP---ELSNIRNPRVLQSLISYLKQHPN 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
F H V L+++ ++A+QT ++ V+ +G WS +++ L
Sbjct: 166 VEFFEHAAVKKLIQNGDI--IQALQTEDGRKHTADHFVITSGAWSHYW------NSQLQL 217
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+IPV+P +G +L+ + P ++ M +
Sbjct: 218 EIPVEPVQGQMLLFKT------------------------PAHWLPTMCMNRVMYLIPRM 253
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPY 434
G++V GSS GF+ ++T I + E P+L ADF I +R GLRP
Sbjct: 254 DGHIVCGSSMAHRGFDNSTDETTQHNILEACLEMVPEL-----ADFPIVHRWA--GLRPS 306
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P+G P IG +P + ++ GH GL + G+A+L+ ++L P VD+ ++
Sbjct: 307 SPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLDQPTLVDAKAYS 361
>gi|419953888|ref|ZP_14470030.1| FAD-binding oxidoreductase [Pseudomonas stutzeri TS44]
gi|387969263|gb|EIK53546.1| FAD-binding oxidoreductase [Pseudomonas stutzeri TS44]
Length = 367
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 184/431 (42%), Gaps = 95/431 (22%)
Query: 85 IIIGAGIIGLTIARQLL-VGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSE 138
+IIGAG+IG+ A +L G D V +++ S A+ AG G Y W +P
Sbjct: 4 VIIGAGVIGMLSAYRLAQAGGD--VLLLESGTAGSEASWAGGGIVSPLYPW--RYSPA-- 57
Query: 139 IWDLALRSNKLWKMLADSLRDQ-GLDPL---------------QVIGWKQTGSLLIGRTP 182
+ LA S + L D L Q G+DP + + W + + P
Sbjct: 58 VTALAHWSQDFYPQLGDQLLAQTGIDPEVYETGLYWLDLQDEDEALAWARQHGRPLQSVP 117
Query: 183 EELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAY 242
+ + V L E RA Y+S ++ P L+ + RAA L + V
Sbjct: 118 --MAQVHAAVPALGEGFERAVYMSGVANVR-NPRLL--QAMRAA-------LRQLPNVRL 165
Query: 243 IEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGS 302
+E+ PVT +R S + V+T++ + +++ +VVAAG WSG
Sbjct: 166 VEQC----------------PVTGFVREGS--RIVGVRTAQGEMRAER-VVVAAGAWSG- 205
Query: 303 LMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG 362
DLLR + L++PVKP KG +++ F + SM
Sbjct: 206 ---DLLRT--LGLELPVKPMKGQMIM---FKCTEDFLPSM-------------------- 237
Query: 363 QILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFI 422
+L+ A G++++GS+ + GF+ + + + K AAE P L D +
Sbjct: 238 -VLAKRRYAIPRRDGHILVGSTLEDVGFDKVPTEDALQSLRKTAAELLPALADAPVV--- 293
Query: 423 SNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLK 482
K GLRP PDG P IG V G ++L GH GL LA + +L+AD++L
Sbjct: 294 ---KHWAGLRPGSPDGVPYIGAVDGFDGLWLNCGHFRNGLVLAPASCQLLADLMLEREPI 350
Query: 483 VDSAPFAVQGR 493
+D P+A + R
Sbjct: 351 IDPQPYAPRAR 361
>gi|449137656|ref|ZP_21772976.1| D-amino acid dehydrogenase small subunit [Rhodopirellula europaea
6C]
gi|448883709|gb|EMB14222.1| D-amino acid dehydrogenase small subunit [Rhodopirellula europaea
6C]
Length = 420
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 184/460 (40%), Gaps = 108/460 (23%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IWD 141
V I+G+GI+G+ A L + L V V+D+ + A GYI H P +E +
Sbjct: 10 VTIVGSGIVGIACA-HYLAEAGLDVTVIDRGSIAGECSHANCGYICPSHALPLTEPGAFS 68
Query: 142 LALRS---------------NKLWKMLADSLRD----QGL---DPLQVI----------- 168
+AL+S LWK + + Q L PLQ I
Sbjct: 69 VALKSVFNPRSPFRVKPQVSPALWKWMMQFAKRCTHRQMLAAGKPLQAILEASMSEYHSL 128
Query: 169 --------GWKQTGSLLIGRTPEELVMLKERVKQLCEA-GLRAEYLSSSDLLQAEPELMV 219
WK+ G L + +T + + + + E G+ A + ++L + +P L
Sbjct: 129 IERLKLDCEWKEEGLLYVLQTERGMESFAKTDRLVSEEFGIPATRIDGNNLPKFDPGLKD 188
Query: 220 GEDSRAAFL-PYDSQLDAMLAVAYIEKGNRHFAS--KGRYAEFYHDPVTCLLRS--NSTG 274
G AFL P D+ + +K N +A+ K R F + C L+S G
Sbjct: 189 G--LAGAFLYPNDTSVRP-------DKLNSQWATNLKERGVRFVEN---CELKSVRKEAG 236
Query: 275 EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNS 334
+ A++T++ ++ V A G WS E+ + +PV+P KG+ + +E
Sbjct: 237 RIVAIETNQGD-FTADHFVFAMGAWSTKW------ESALQCSVPVQPGKGYSVTIE---- 285
Query: 335 LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEV 394
K +H+ A H + + P L GS +FAG++T +
Sbjct: 286 -KPDHSPSHAILFPEHKVGVSP------------------FDDGLRFGSMMEFAGYDTSI 326
Query: 395 EQTIIDRIWKRAAEFYPKLRDLCLADFISN-----RKVRIGLRPYMPDGKPVIGPVPGLS 449
+ I +LRD +++ + G RP D P+IG +P L
Sbjct: 327 PKHRIQ-----------QLRDSARPYLVASVDGPAQSQWYGWRPMTWDSLPIIGSLPELK 375
Query: 450 KVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
LATGH LGLSLA T LVA+MV +D P++
Sbjct: 376 NGMLATGHNMLGLSLAPATGRLVAEMVTGQTTHLDPTPYS 415
>gi|94968762|ref|YP_590810.1| glycine oxidase ThiO [Candidatus Koribacter versatilis Ellin345]
gi|94550812|gb|ABF40736.1| glycine oxidase [Candidatus Koribacter versatilis Ellin345]
Length = 368
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 179/410 (43%), Gaps = 68/410 (16%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
+ DVI+IGAG+IGL++A +L S L V VV++ P A+ A G I + +
Sbjct: 20 SHDVIVIGAGVIGLSLAWKLQ-KSGLRVLVVERGEPGREASYAAAGMIAVCDPHNDRLMQ 78
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA S ++ L D+ + + + + ++ P L + K
Sbjct: 79 PLAEISAAMYPEFVHELEDESQEKVDL----RNEGVITFLDPSSYSALHPKSKA------ 128
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
L++ +++ EP ++ + A FLP +S +D L + + + +H G A
Sbjct: 129 ----LTAEEVVTIEPGVV--PRANAYFLP-ESWVDPRLLCSALLRAFKHRG--GDVAS-- 177
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
PV S + EV ++ T+Y AIV G W+G LM P +
Sbjct: 178 GSPVL----SVTDNEVR----TEQTIYHAAAIVNCGGAWAGQLMP----------PNPTR 219
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG-QILSISMTATTDVIGNL 379
P KG +L + + L H T HP + H + + + +D G +
Sbjct: 220 PVKGQMLCV-----VPLAHP------------TPHPPVLRHVIRATDVYLVPRSD--GRI 260
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++GS+ + GF+ +V +I ++ A P ++D+ D + GLRP PDG+
Sbjct: 261 IIGSTLEEGGFDKQVNPDVIQQLRSSAESILPAVKDMRTHDAWA------GLRPGTPDGR 314
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P++G + ++A GH G+ LA TAE++A ++ ++D P A
Sbjct: 315 PLLGKL--APNHYIAAGHYRDGILLAPATAEVMAALIEGRTPEIDLRPLA 362
>gi|84388540|ref|ZP_00991087.1| D-amino acid dehydrogenase small subunit [Vibrio splendidus 12B01]
gi|84377089|gb|EAP93960.1| D-amino acid dehydrogenase small subunit [Vibrio splendidus 12B01]
Length = 417
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 140/313 (44%), Gaps = 53/313 (16%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R+ ++L +++ +K L E+G+ L EP L +D +L
Sbjct: 133 RQKGTLQVFRSEKQLDFIQQDMKLLQESGIEHSLFDVEQCLSIEPGLSDVKDKLVGGLYL 192
Query: 229 PYDSQLDA-MLAVAYIEKGNRHFASKGRYAEFYHD-PVTCLLRSNSTGEVEAVQTSKNTL 286
P+D D + EK +K F D V L N T +E++ T++
Sbjct: 193 PHDETGDCHQFCLTLTEK------AKQLGVRFVFDTEVVKLNHQNQT--IESITTTQGE- 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
+ A VVA+G +S DLL++ + L IPV P KG+ L L N+ K
Sbjct: 244 FKADAYVVASGSYS----RDLLKQVD--LSIPVYPVKGYSLTLPIVNADK---------- 287
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFN---TEVEQTIIDRIW 403
P + ++MT D I + + + AGF+ E + ID +
Sbjct: 288 --------SPTSTVMDETYKVAMTRFDDRIR---IAGTAELAGFDYLIPEKRKATIDMVI 336
Query: 404 KRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLS 463
K + +P+ D A++ + GLRP PDG P+IG P + +F TGH LG +
Sbjct: 337 K---DLFPQAGDFSKAEYWT------GLRPMTPDGTPIIGKTP-IKNLFTNTGHGTLGWT 386
Query: 464 LALGTAELVADMV 476
+A G+ +++A +V
Sbjct: 387 MACGSGKILAGIV 399
>gi|296391370|ref|ZP_06880845.1| putative glycine/D-amino acid oxidases [Pseudomonas aeruginosa
PAb1]
Length = 356
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 173/415 (41%), Gaps = 69/415 (16%)
Query: 88 GAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSEIWDL 142
GAG+IGL AR+L + + L V +V++ A+ AG G Y W + L
Sbjct: 1 GAGVIGLLTARELAL-AGLRVTLVERGESGREASWAGGGIVSPLYPWRYS----PAVTAL 55
Query: 143 ALRSNKLWKMLADSLRDQ-GLDP-LQVIG--WKQTGSLLIGRTPEELVMLKERVKQLCEA 198
A S + L L D+ GLDP + +G W L + E L + + L E
Sbjct: 56 AHWSQDFYPALGQRLLDETGLDPEVHTVGLYW-----LDLDDQTEALQWARNHTRPLKEV 110
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE 258
+ Y A P L G RA ++ + + + + FA+ + +
Sbjct: 111 PIEEAY-------AAVPGLGAGF-QRAVYMSGVANVRNPRLARSLRASLQQFANLELHEQ 162
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
V LR V V TS+ + K +++AAG WSG L+ L L++P
Sbjct: 163 ---TEVRGWLRDGD--RVVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLELP 210
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
V P KG +++ Y D +L+ A G+
Sbjct: 211 VVPVKGQMIL-----------------YKCAADFLPR-------MVLAKGRYAIPRRDGH 246
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+++GS+ + +GF+ ++ + AAE P+L D+ + GLRP P+G
Sbjct: 247 ILIGSTLEHSGFDKTPTDEALESLRASAAELLPELADMQPVAHWA------GLRPGSPEG 300
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
P IGPVPG ++L TGH GL LA + L+AD++ +D AP+A GR
Sbjct: 301 IPYIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADLMSGRESIIDPAPYAPAGR 355
>gi|392308506|ref|ZP_10271040.1| hydrogen cyanide synthase HcnC [Pseudoalteromonas citrea NCIMB
1889]
Length = 404
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 179/446 (40%), Gaps = 89/446 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMV---------- 131
FDV+I G G+IG A L + L VA++D P A+ A G +W +
Sbjct: 4 FDVVIAGGGVIGAACAYFLSRDTKLKVALIDIKKP-GNASRASAGGLWAIGESVGLGCGV 62
Query: 132 -----------------------HRTPGSEIWDLALRSNKLWKMLADSLRDQ-GLDPLQV 167
H+ P ++ AL SN ++ L L +Q G+D
Sbjct: 63 IFFKTLSKLQSEAKGKDIPVMRPHQLPDC-FFEFALASNAMYPSLHKELLEQHGVD---- 117
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
+++TG I ++ + + + + +L + L + EP + +D+ A
Sbjct: 118 FKFEKTGLKFIMYNEDDRIYADQITSGIPHLADQIRWLDAQQLKEEEP--YITDDAIGAI 175
Query: 228 -LPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT 285
D Q++ L AY+E ++ +E V +LR V V T +NT
Sbjct: 176 DFICDHQVNPYRLVDAYLEGARQNGVELVLNSE-----VNQVLREGD--RVTGVTTQENT 228
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
Y ++ AAG W+ D L L++PV P KG +++ E + S
Sbjct: 229 -YRCDTLINAAGAWA-----DTLFNKATGLNMPVYPVKGQIVLSERLPKVLNGCVSTSDC 282
Query: 346 YVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKR 405
Y+ D +G+IL +GSS + GF+T I + +
Sbjct: 283 YIAQKD---------NGEIL---------------IGSSTEEKGFDTTNSLDKITELSQG 318
Query: 406 AAEFYPKLRDLCLADFISN-RKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
A + P L+D SN ++ GLRP PD P++G VPG+ A GH G+
Sbjct: 319 ALKCLPILKD-------SNIKRCWAGLRPGTPDELPILGYVPGVEGYINACGHFRTGIVT 371
Query: 465 ALGTAELVADMVLTNPLKVDSAPFAV 490
+ T +L+ ++V +D PF+V
Sbjct: 372 SAITGKLIMELVTGQQTSLDLTPFSV 397
>gi|406662634|ref|ZP_11070725.1| Glycine oxidase [Cecembia lonarensis LW9]
gi|405553402|gb|EKB48660.1| Glycine oxidase [Cecembia lonarensis LW9]
Length = 415
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 135/308 (43%), Gaps = 50/308 (16%)
Query: 172 QTGSLLIGRTPEELVMLKERVK--QLC-EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFL 228
+ G +++ +T E M KE V+ L + GL AE L+SSD+ + EP L V +R A L
Sbjct: 136 EKGLMMLYQTAE---MEKEEVEFAHLARQQGLEAEVLNSSDISKIEPNLEV--KARGAVL 190
Query: 229 -PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
P D+ L +++K + KG + L G+V AV T + +L
Sbjct: 191 FPGDAHLSPSNLYNFLKK---YLKEKGVK---FLPKQKVLGFEKQAGKVIAVLTEEGSLS 244
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ K +++ G WS L L ++P+ KG+ + EN
Sbjct: 245 ADK-VILCGGAWSAELAKHL------GFNLPMMGGKGYSFMQEN---------------- 281
Query: 348 GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAA 407
P ++ IL+ A + + G + + AG + + + I++
Sbjct: 282 -------QP-EIQQASILTEMKVAVSPYGPQVRFGGTMEIAGTDESININRVRGIFESIN 333
Query: 408 EFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALG 467
FYP + A F K+ GLRP PDG P IG PG V+ TGH +G+S+A G
Sbjct: 334 RFYPGFQ----AKFPEKDKIWKGLRPCSPDGVPYIGAAPGYDNVWFGTGHGMMGVSMATG 389
Query: 468 TAELVADM 475
T +++AD+
Sbjct: 390 TGKILADL 397
>gi|409201529|ref|ZP_11229732.1| hydrogen cyanide synthase HcnC [Pseudoalteromonas flavipulchra JG1]
Length = 401
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 179/443 (40%), Gaps = 81/443 (18%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DVII G G+IG A L ++L +A+VD P A+ A G +W + + G
Sbjct: 4 YDVIIAGGGVIGAACAYFLSRDTNLKIALVDLKKP-GNASRASAGGLWAIGESVGLGCGV 62
Query: 137 ----------SE-----------------IWDLALRSNKLWKMLADS-LRDQGLDPLQVI 168
SE ++LAL+SN+L+ L + L +D
Sbjct: 63 IFFKTLSKLQSEGDTEAAETLRPHQLPECFFELALKSNELYPALHEEMLARHDVD----F 118
Query: 169 GWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFL 228
+++TG I ++ + V + + +L L EP + F+
Sbjct: 119 KFERTGLKFIMYNRDDEIYADSIVSGIPNLSSQIRWLDQQQLRAEEPYITPDAIGAIDFI 178
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
D Q++ V +G R + F + V +LR S +V V+T +L+
Sbjct: 179 -CDHQVNPYRLVDAYTEGARQNGVE----LFLNTEVLEVLREGS--KVIGVKTQDQSLHC 231
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
+ ++ AAG W+ + H + +PV P KG +++ E + S Y+
Sbjct: 232 E-TLINAAGAWADDIYHQATGK-----HMPVYPVKGQIVLSERMPKVLNGCISTSDCYIA 285
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D +G+IL +GSS + GF+T I + + A +
Sbjct: 286 QKD---------NGEIL---------------IGSSTEEKGFDTTNSLDKITELSQGAMK 321
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
P L++ S ++ GLRP PD P++GPV G+ A GH G+ ++ T
Sbjct: 322 CLPVLKE------SSIKRCWAGLRPGTPDELPILGPVDGVEGYINACGHFRTGILMSAIT 375
Query: 469 AELVADMVLTNPLKVDSAPFAVQ 491
L+ +++ P VD APF V+
Sbjct: 376 GTLITELMTGKPTSVDLAPFRVE 398
>gi|153833545|ref|ZP_01986212.1| D-amino acid dehydrogenase small subunit [Vibrio harveyi HY01]
gi|148870196|gb|EDL69137.1| D-amino acid dehydrogenase small subunit [Vibrio harveyi HY01]
Length = 418
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 141/316 (44%), Gaps = 45/316 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R+ ++L +++ +K L ++G R + ++ ++ EP L + ++ +L
Sbjct: 133 RQLGTLQVFRSQQQLDAIEKDLKLLEQSGTRFQLMNVEQCIKQEPGLALVKEKLVGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D + ++ ++G EF + + ++ VQT + L+
Sbjct: 193 PDDETGDCF---QFCQQLTELAKARGVRFEFNTEVSNWVTVGK---KIMGVQTDRG-LFK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLE-NFNSLKLNHASMEAGYV 347
V+A+G +S +L+ L +DIPV P KG+ L + + M+ Y
Sbjct: 246 ADQFVLASGSYSTALLKQL------KIDIPVYPVKGYSLTVPIKYEQFAPRSTVMDETY- 298
Query: 348 GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAA 407
++MT D I + + + AGF+ + Q + I
Sbjct: 299 ------------------KVAMTRFDDRIR---VAGTAELAGFDPSLPQKRKNTIEMVIR 337
Query: 408 EFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALG 467
+ +P+ D A+F S G RP PDG P+IG P +F TGH LG ++A G
Sbjct: 338 DLFPQSADFTQAEFWS------GFRPMTPDGTPIIGATP-YENLFTNTGHGTLGWTMACG 390
Query: 468 TAELVADMVLTNPLKV 483
+ +++AD++L + KV
Sbjct: 391 SGQILADIMLNSDTKV 406
>gi|422422620|ref|ZP_16499573.1| oxidoreductase, DadA family protein [Listeria seeligeri FSL S4-171]
gi|313637208|gb|EFS02725.1| oxidoreductase, DadA family protein [Listeria seeligeri FSL S4-171]
Length = 368
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 183/410 (44%), Gaps = 74/410 (18%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI--WMVHRTPGSEIW- 140
++IIGAGI+G + A LL ++ V ++D P A+ A G I W+ R ++ W
Sbjct: 4 IVIIGAGIVGAS-AAYLLSKENVEVTLIDSSEPGQ-ASRAAAGIICPWLSKRR--NKYWY 59
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVML----KERVKQLC 196
+LA S ++ +A LR+ D + G+KQ G L + +T E+L L KER +
Sbjct: 60 ELAKNSAAFYEEIAQMLRE---DTGKETGYKQVGVLALRQTEEKLETLFKLAKERRVEAP 116
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA-----MLAVAYIEKGNRHFA 251
G+ E L+ ++ + P + G S ++ ++L+ L +A E+G + A
Sbjct: 117 NMGV-IEKLTEAETKEKFPLVKPGFGS--IYVSGAARLNGSLFCQTLLMAAKERGVKILA 173
Query: 252 SKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET 311
K ++ + GEV +N Y K +++A G W S + D +T
Sbjct: 174 GKATFS--------------AAGEVFIHGKKEN--YDK--LIIATGAWLASFLQDAXYKT 215
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTA 371
E++ +KG LL L +F S+ + L P S S+
Sbjct: 216 EVL------AQKGQLLEL-DFGSVN----------TADWPVILPPS--------SKSIVP 250
Query: 372 TTDVIGNLVLGSSRQ-FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIG 430
D G +++G++ + AGFN E I + +F + + +A+ V +G
Sbjct: 251 FED--GKVIVGATHEKTAGFNIEPTAEGQVEILEEVTKFMEDVSNEKIAN------VTVG 302
Query: 431 LRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNP 480
RPY PD P+IG +PG VFLA G GL+ A+L+ ++ L P
Sbjct: 303 TRPYTPDFAPLIGSLPGFDSVFLANGLGASGLTTGPYVAKLLVELALDLP 352
>gi|357008207|ref|ZP_09073206.1| glycine oxidase ThiO [Paenibacillus elgii B69]
Length = 382
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 150/359 (41%), Gaps = 53/359 (14%)
Query: 131 VHRTPGSEIWDLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLK 189
HR PG ++L S +L++ D L GL V G + T E+ L+
Sbjct: 63 THR-PGP-YYELCRLSQQLYRAWTDELEQVSGLSAQYV----AEGIVRAALTEEDEAELR 116
Query: 190 ERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRH 249
R+ + +A E++ +++L+ EPEL +LP D + + ++
Sbjct: 117 GRLSWIRDA----EWVQPAEMLKLEPELTAAVRG-GLYLPADHHVHPVWLAKTLQAA--- 168
Query: 250 FASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLR 309
A +G + PV LL +G + VQTS+ LY+ +V+AAG WS +L L
Sbjct: 169 IAKQGCTIREW-TPVIRLLTEPGSGRIRGVQTSEGPLYAD-LVVLAAGAWSPALTEPL-- 224
Query: 310 ETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM 369
L +P+ P KG + L+ L + + YV
Sbjct: 225 ----GLSLPMFPVKGQCISLKTEAPLIRSTVFTKGCYV---------------------- 258
Query: 370 TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI 429
G+ ++G+++ AGF+ +I + +AA P+L D A+F+S
Sbjct: 259 --VPKRDGSYIVGATQTEAGFDKRPTAKVIGELHAKAATLLPRLAD---AEFVSTWA--- 310
Query: 430 GLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
GLRP D P +G + ATGH G+ LA TA +VA++ P D APF
Sbjct: 311 GLRPGTRDALPFLGTWDAAPGLIFATGHYRNGILLAPATARIVAELAQGRPTSADLAPF 369
>gi|421169182|ref|ZP_15627221.1| hypothetical protein PABE177_4001, partial [Pseudomonas aeruginosa
ATCC 700888]
gi|404527488|gb|EKA37644.1| hypothetical protein PABE177_4001, partial [Pseudomonas aeruginosa
ATCC 700888]
Length = 323
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 163/376 (43%), Gaps = 60/376 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+VI++GAGI+G A +L L V V+D GAT G G++ + P +L
Sbjct: 4 EVIVVGAGIVGSACAHEL-ARRGLDVLVLDSRR--GGATAVGMGHLVAMDDNPA----EL 56
Query: 143 ALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
AL S + W+ A L + ++ G+L + EL + + + L AG+
Sbjct: 57 ALSDYSIQAWRTWAADLPED-------CAYRNCGTLWLAADAAELAEAERKRQALLAAGV 109
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E L ++ L EP L G + A +P D L A A ++ G
Sbjct: 110 ACEMLDAARLRDLEPVLRPGL-AGALKVPGDGILYAPNAARWL------LERAGPRLRRL 162
Query: 261 HDPVTCLLRSNSTGEVEA--VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
H V+ EV+ ++ + S +A+V+A G +G E+ ++P
Sbjct: 163 HAEVS---------EVDGSRLRLADGRWLSAEALVLANGIHAG----------ELCAELP 203
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
++P+KGHLL+ + + L H +E GYV + S++ A G
Sbjct: 204 IRPKKGHLLITDRYPG-TLRHQLVELGYVS---------SAHASSGTSVAFNAQPRPTGQ 253
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+ LGSSRQF + +VE ++ R+ +RA ++ P L L + + G R PDG
Sbjct: 254 VFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGL------NAIRAWTGFRAATPDG 307
Query: 439 KPVIGPVPGLSKVFLA 454
P++G P ++LA
Sbjct: 308 LPLLGEHPAQPGLWLA 323
>gi|330501966|ref|YP_004378835.1| glycine oxidase ThiO [Pseudomonas mendocina NK-01]
gi|328916252|gb|AEB57083.1| glycine oxidase ThiO [Pseudomonas mendocina NK-01]
Length = 354
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 39/233 (16%)
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H PVT ++ G++ V T+ + + + +V+AAG WSG L+ L L++PV+
Sbjct: 158 HCPVTGFIQE--AGQIRGVTTADGEIRADR-VVLAAGAWSGELLRTL------GLELPVE 208
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P KG +++ Y D +L+ A G+++
Sbjct: 209 PVKGQMIL-----------------YRCAEDFL-------PSMVLAKGRYAIPRRDGHIL 244
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GS+ ++AGF+ + ++ + A E P L+D A+ + + GLRP P+G P
Sbjct: 245 IGSTLEYAGFDKTPTENALESLKASAEELLPALKD---AEVVGHWA---GLRPGSPEGIP 298
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
IG +P ++L GH GL LA + +L+AD++L +D AP+A GR
Sbjct: 299 FIGELPSHPGLWLNCGHFRNGLVLAPASCQLLADLMLGREPIIDPAPYAPAGR 351
>gi|386064003|ref|YP_005979307.1| putative glycine/D-amino acid oxidase [Pseudomonas aeruginosa
NCGM2.S1]
gi|348032562|dbj|BAK87922.1| putative glycine/D-amino acid oxidase [Pseudomonas aeruginosa
NCGM2.S1]
Length = 357
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 175/416 (42%), Gaps = 69/416 (16%)
Query: 87 IGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSEIWD 141
+GAG+IGL AR+L + + L V +V++ A+ AG G Y W +
Sbjct: 1 MGAGVIGLLTARELAL-AGLRVTLVERGESGREASWAGGGIVSPLYPWRYS----PAVTA 55
Query: 142 LALRSNKLWKMLADSLRDQ-GLDP-LQVIG--WKQTGSLLIGRTPEELVMLKERVKQLCE 197
LA S + L L D+ GLDP + +G W L + E L ++ + L +
Sbjct: 56 LAHWSQDFYPALGQRLLDETGLDPEVHTVGLYW-----LDLDDQTEALQWARKHTRPLRD 110
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
+ Y A P L G RA ++ + + + + FA+ +
Sbjct: 111 VPIEEAY-------AAVPGLGAGF-QRAVYMSGVANVRNPRLARSLRASLQQFANLELHE 162
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
+ V LR V V TS+ + K +++AAG WSG L+ L L++
Sbjct: 163 Q---TEVRGWLRDGD--RVVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLEL 210
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
PV P KG +++ Y D +L+ A G
Sbjct: 211 PVVPVKGQMIL-----------------YKCAADFLPR-------MVLAKGRYAIPRRDG 246
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
++++GS+ + +GF+ ++ + AAE P+L D+ + GLRP P+
Sbjct: 247 HILIGSTLEHSGFDKTPTDEALESLRASAAELLPELADMQPVAHWA------GLRPGSPE 300
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
G P IGPVPG ++L TGH GL LA + L+AD++ +D AP+A GR
Sbjct: 301 GIPYIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADLMSGREPIIDPAPYAPAGR 356
>gi|372277836|ref|ZP_09513872.1| D-amino acid dehydrogenase small subunit [Pantoea sp. SL1_M5]
gi|390434191|ref|ZP_10222729.1| D-amino acid dehydrogenase small subunit [Pantoea agglomerans IG1]
Length = 433
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 135/309 (43%), Gaps = 46/309 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++ + + L +AG+ E L + +L + EP L + L
Sbjct: 133 RQGGTLQLFRTQQQFDSASKDIAVLRDAGVPYELLQAHELSRVEPALAATQHKLTGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + K A + ++ PV LLR + + V+ + +
Sbjct: 193 PNDETGDCQLFTQRLAK----MAEEAGVVFRFNTPVDHLLRDGN--RIYGVKCG-DEIIK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
+ VVA G +S +L+ + V+DIPV P KG+ L + N
Sbjct: 246 ADSYVVAFGSYSTALLKN-------VIDIPVYPLKGYSLTIPIKN--------------- 283
Query: 349 HHDLTLHPGQVNHGQILSISM-TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAA 407
P IL + A T + +G + GFNT++ + + + +
Sbjct: 284 -------PDAAPVSTILDETYKVAVTRFDDRIRVGGMAEIVGFNTKLTEARRETLEMVVS 336
Query: 408 EFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALG 467
+ YP+ L A F + GLRP PDG P++G P +S ++L TGH LG ++A G
Sbjct: 337 DLYPEGGHLAQASFWT------GLRPMTPDGTPIVGATP-ISNLWLNTGHGTLGWTMACG 389
Query: 468 TAELVADMV 476
+ +L+AD++
Sbjct: 390 SGQLLADLI 398
>gi|138894210|ref|YP_001124663.1| glycine oxidase [Geobacillus thermodenitrificans NG80-2]
gi|134265723|gb|ABO65918.1| Glycine oxidase [Geobacillus thermodenitrificans NG80-2]
Length = 379
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 187/419 (44%), Gaps = 62/419 (14%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI--WMVHRTPGS 137
H +DV I+G G+IG +A + L VA+++K ++ A G + TP S
Sbjct: 4 HYYDVAIVGGGVIGAAVAFE-LAKRKYRVAILEKGTMAGESSSAAAGMLGAQAEFSTP-S 61
Query: 138 EIWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+ LAL+S L LA+ L+++ G+D IG + G + I T EE L+
Sbjct: 62 PLVPLALKSRTLMPSLAEELKERTGID----IGLVEKGMIKIATTEEEAEDLRRHYTFWS 117
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA-----MLAVAYIEKGNRHFA 251
+L+ ++L+ EP L + A ++ D Q+ A L A + G R +
Sbjct: 118 ATDQPVRWLTKEEVLEIEPRLAMEAIVGAMYIEGDGQVSAPDLAAALVHAAVSAGARLY- 176
Query: 252 SKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET 311
Y E + +RS++ G + T+ T +S +A+V+A+G W+ S + +LL
Sbjct: 177 ---EYTEVLN------IRSDAGG--HHLDTTDGT-FSAEAVVIASGAWA-SQLGNLLG-- 221
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTA 371
L + V P KG +++ L ++A + + P + N
Sbjct: 222 ---LPLSVSPVKGECVMVRTPVPL------LQATVFAKNGCYIVPKRGN----------- 261
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
L++G++ ++ V + + RAA P D+ A+++ + G+
Sbjct: 262 ------QLLIGATSTPGTYDRHVCAGGVMNLLHRAARLLP---DVKQAEWV---RAWSGI 309
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
RP DG P IG P VF+A GH G+ L+ T +L+AD++ +VD +PF++
Sbjct: 310 RPQTKDGLPYIGEHPERHGVFVAAGHYRNGILLSAITGQLMADLIERKEPEVDLSPFSL 368
>gi|343500108|ref|ZP_08738024.1| D-amino acid dehydrogenase small subunit [Vibrio tubiashii ATCC
19109]
gi|418478582|ref|ZP_13047682.1| D-amino acid dehydrogenase small subunit [Vibrio tubiashii NCIMB
1337 = ATCC 19106]
gi|342821312|gb|EGU56099.1| D-amino acid dehydrogenase small subunit [Vibrio tubiashii ATCC
19109]
gi|384573824|gb|EIF04311.1| D-amino acid dehydrogenase small subunit [Vibrio tubiashii NCIMB
1337 = ATCC 19106]
Length = 416
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 139/311 (44%), Gaps = 43/311 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL--MVGEDSRAAFL 228
+ G+L I RT +L +++ + L E+G + + L + L EP L M GE +L
Sbjct: 133 RTQGTLQIFRTSTQLKAVEKDMALLEESGTQFKLLDAKQCLNQEPGLANMQGELVGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + K A + ++ V LL ++ +V V+TS TL S
Sbjct: 193 PDDETGDCYLFCQQLHK----MAEQAGVEFMFNTDVEALLTEST--KVVGVKTSLGTL-S 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
VVA G +S +L++ I LDIPV P KG+ L L N + +++
Sbjct: 246 ADHFVVALGSYSKALLN------PIGLDIPVYPVKGYSLTLPVTNEQQAPSSTI------ 293
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D T Q + ++ TA + AGF+ + + + +
Sbjct: 294 -MDETYKVALTRFDQRIRVAGTA--------------ELAGFDPALPDKRLATLNHVVSN 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ D A++ + G RP PDG P+IG S +F TGH LG ++A G+
Sbjct: 339 LFPQGVDFSQAEYWT------GFRPMTPDGTPIIGQTK-FSNLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTN 479
A+++A+++ +N
Sbjct: 392 ADILAELMASN 402
>gi|433656901|ref|YP_007274280.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
BB22OP]
gi|432507589|gb|AGB09106.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
BB22OP]
Length = 418
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 134/315 (42%), Gaps = 43/315 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++L +++ +K L ++G R E + L+ EP L + +D +L
Sbjct: 133 RQFGTLQVFRTTQQLTAIEKDLKLLEQSGTRFELMDVEQCLRQEPGLALVKDKIVGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D + + + R+ + VT ++ VQT+ L+
Sbjct: 193 PDDETGDCFQFCQQLTELAKAHGVTFRFNTEVSNWVTV------GKKIIGVQTNHG-LFK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
VVA+G +S +L+ L +DIPV P KG+ L L N
Sbjct: 246 ADQFVVASGSFSTALLKQL------DIDIPVYPVKGYSLTLPIENE-------------- 285
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
P + ++MT D I + + + AGF+ + Q + I +
Sbjct: 286 ----EYAPRSTVMDETYKVAMTRFDDRIR---VAGTAELAGFDPSLPQKRKNTIEMVVRD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ D A+F + G RP PDG P+IG P +F TGH LG ++A G+
Sbjct: 339 LFPRGGDFSQAEFWT------GFRPMTPDGTPIIGATP-YDNLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTNPLKV 483
L+A+++ K+
Sbjct: 392 GHLLANIMTGEKAKI 406
>gi|146281362|ref|YP_001171515.1| oxidoreductase, FAD-binding [Pseudomonas stutzeri A1501]
gi|145569567|gb|ABP78673.1| oxidoreductase, FAD-binding [Pseudomonas stutzeri A1501]
Length = 286
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
PV LR + + VQT++ + + + +VVAAG WS L+ L L+IPVKP
Sbjct: 89 PVEGFLRDGT--RIVGVQTAQGEMRADQ-VVVAAGAWSAKLLATL------GLEIPVKPM 139
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KG +++ F + SM +L+ A G++++G
Sbjct: 140 KGQMIL---FKCAEDFLPSM---------------------VLAKRRYAIPRRDGHILVG 175
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
S+ + GF+ + ++ + A E P L D + K GLRP PDG P I
Sbjct: 176 STLEDVGFDKTPTEDALESLRATAVELLPALADAQVV------KHWAGLRPGSPDGVPYI 229
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
G V G ++L GH GL LA + +L+ D++L P VD AP+A GR
Sbjct: 230 GQVSGFDGLWLNCGHFRNGLVLAPASCQLLVDLMLGQPPIVDPAPYAPTGR 280
>gi|386060701|ref|YP_005977223.1| putative D-amino acid oxidase [Pseudomonas aeruginosa M18]
gi|416858851|ref|ZP_11913566.1| D-amino acid oxidase [Pseudomonas aeruginosa 138244]
gi|334839001|gb|EGM17700.1| D-amino acid oxidase [Pseudomonas aeruginosa 138244]
gi|347307007|gb|AEO77121.1| putative D-amino acid oxidase [Pseudomonas aeruginosa M18]
gi|453046114|gb|EME93831.1| putative D-amino acid oxidase [Pseudomonas aeruginosa PA21_ST175]
Length = 357
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 174/416 (41%), Gaps = 69/416 (16%)
Query: 87 IGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSEIWD 141
+GAG+IGL AR+L + + L V +V++ A+ AG G Y W +
Sbjct: 1 MGAGVIGLLTARELAL-AGLRVTLVERGESGREASWAGGGIVSPLYPWRYS----PAVTA 55
Query: 142 LALRSNKLWKMLADSLRDQ-GLDP-LQVIG--WKQTGSLLIGRTPEELVMLKERVKQLCE 197
LA S + L L D+ GLDP + +G W L + E L ++ + L E
Sbjct: 56 LAHWSQDFYPALGQRLLDETGLDPEVHTVGLYW-----LDLDDQTEALQWARKHTRPLKE 110
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
+ Y A P L G RA ++ + + + + FA+ +
Sbjct: 111 VPIEEAY-------AAVPGLGAGF-QRAVYMSGVANVRNPRLARSLRASLQQFANIELHE 162
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
+ V LR V V TS+ + K +++AAG WSG L+ L L++
Sbjct: 163 Q---TEVRGWLRDGD--RVVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLEL 210
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
PV P KG +++ Y D +L+ A G
Sbjct: 211 PVVPVKGQMIL-----------------YKCAADFLPR-------MVLAKGRYAIPRRDG 246
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
++++GS+ + +GF+ ++ + AAE P+L D+ + GLRP P+
Sbjct: 247 HILIGSTLEHSGFDKTPTDEALESLRASAAELLPELADMQPVAHWA------GLRPGSPE 300
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
G P IGPVPG ++L TGH GL LA + L+AD++ +D P+A GR
Sbjct: 301 GIPYIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADLMSGREPIIDPVPYAPAGR 356
>gi|114776342|ref|ZP_01451387.1| FAD dependent oxidoreductase [Mariprofundus ferrooxydans PV-1]
gi|114553172|gb|EAU55570.1| FAD dependent oxidoreductase [Mariprofundus ferrooxydans PV-1]
Length = 413
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 36/221 (16%)
Query: 271 NSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLE 330
N G+V +V + A+++AAG WSG L +I L++PV+P KG +++L
Sbjct: 215 NGQGDVASVVLAGGERIDTDAVLLAAGSWSGGLAR------QIGLELPVEPVKGQIVLLR 268
Query: 331 NFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGF 390
+ K+ H + H D+ L P G++++G+S + GF
Sbjct: 269 D-EPGKVKH------IIKHDDVYLVP-----------------RADGHILVGASMERVGF 304
Query: 391 NTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSK 450
+ +++ + + P L+D + + +G RP PDG P +GPV G
Sbjct: 305 EPGTTEAVVNNLLEATYRITPGLKDSKII------QQWMGFRPGSPDGMPYLGPVDGYPG 358
Query: 451 VFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
+++ATGH G++LA GTA+L++ ++ +VD + F V
Sbjct: 359 LWVATGHYRNGVALAPGTADLMSRWIMGEAPQVDLSDFRVN 399
>gi|418584134|ref|ZP_13148199.1| D-amino acid oxidase [Pseudomonas aeruginosa MPAO1/P1]
gi|418590187|ref|ZP_13154100.1| D-amino acid oxidase [Pseudomonas aeruginosa MPAO1/P2]
gi|421519103|ref|ZP_15965775.1| D-amino acid oxidase [Pseudomonas aeruginosa PAO579]
gi|375046263|gb|EHS38828.1| D-amino acid oxidase [Pseudomonas aeruginosa MPAO1/P1]
gi|375050960|gb|EHS43435.1| D-amino acid oxidase [Pseudomonas aeruginosa MPAO1/P2]
gi|404346088|gb|EJZ72439.1| D-amino acid oxidase [Pseudomonas aeruginosa PAO579]
Length = 357
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 174/416 (41%), Gaps = 69/416 (16%)
Query: 87 IGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSEIWD 141
+GAG+IGL AR+L + + L V +V++ A+ AG G Y W +
Sbjct: 1 MGAGVIGLLTARELAL-AGLRVTLVERGESGREASWAGGGIVSPLYPWRYS----PAVTA 55
Query: 142 LALRSNKLWKMLADSLRDQ-GLDP-LQVIG--WKQTGSLLIGRTPEELVMLKERVKQLCE 197
LA S + L L D+ GLDP + +G W L + E L ++ + L E
Sbjct: 56 LAHWSQDFYPALGQRLLDETGLDPEVHTVGLYW-----LDLDDQTEALQWARKHTRPLKE 110
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
+ Y A P L G RA ++ + + + + FA+ +
Sbjct: 111 VPIEEAY-------AAVPGLGAGF-QRAVYMSGVANVRNPRLARSLRASLQQFANLELHE 162
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
+ V LR V V TS+ + K +++AAG WSG L+ L L++
Sbjct: 163 Q---TEVRGWLRDGD--RVVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLEL 210
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
PV P KG +++ Y D +L+ A G
Sbjct: 211 PVVPVKGQMIL-----------------YKCAADFLPR-------MVLAKGRYAIPRRDG 246
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
++++GS+ + +GF+ + + AAE P+L D+ + GLRP P+
Sbjct: 247 HILIGSTLEHSGFDKTPTDEAQESLRASAAELLPELADMQPVAHWA------GLRPGSPE 300
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
G P IGPVPG ++L TGH GL LA + L+AD++ +D AP+A GR
Sbjct: 301 GIPYIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADLMSGREPIIDPAPYAPAGR 356
>gi|372269583|ref|ZP_09505631.1| glycine oxidase ThiO [Marinobacterium stanieri S30]
Length = 368
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 172/423 (40%), Gaps = 73/423 (17%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGS 137
D +I+GAG+IGL AR L V ++++ A+ AG G Y W
Sbjct: 3 DYVIVGAGVIGLMTAR-FLAQDGAKVKLIERGTSAREASWAGGGIVSPLYPWRYQ----D 57
Query: 138 EIWDLALRSNKLWKMLADS-LRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+ LAL S + LA L + G DP +Q G L++ PEE + + ++
Sbjct: 58 AVTSLALWSQSSYVHLAQELLAETGCDPEL----RQKGMLMLDVKPEEEAVALDWARRYH 113
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRY 256
+ + + + + E L G +S A ++P VA I N R
Sbjct: 114 RPLTK---VGADFIYRTEEHLAPGFES-AIWMP---------EVASIR--NPRLGQALRE 158
Query: 257 AEFYHDPVTCLLRSNSTG------EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRE 310
+ H +T S TG V V+T++ + ++A G WSG L+
Sbjct: 159 SVRKHPNITLCEDSEVTGFSLFGERVLGVKTTRGE-HQGGETILAGGAWSGELL------ 211
Query: 311 TEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMT 370
++ L +PV+P +G ++V + + +E YV
Sbjct: 212 AQLNLGLPVEPVRGQMMVFKAAPGVVDRVVMLEGRYV----------------------I 249
Query: 371 ATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIG 430
+D G +++GS+ + GF+ + ++ A P+L D + + G
Sbjct: 250 PRSD--GRVLVGSTLEHVGFDKSTTEEASRSLFDTATRIVPELADYEVEHHWA------G 301
Query: 431 LRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
LRP P+G P IG VPG + L TGH GL LA + L+AD++L VD ++
Sbjct: 302 LRPGSPEGVPFIGAVPGWQGLHLNTGHYRNGLVLAPASTRLMADLLLGRSPVVDPDAYSP 361
Query: 491 QGR 493
GR
Sbjct: 362 AGR 364
>gi|404451024|ref|ZP_11015998.1| glycine/D-amino acid oxidase, deaminating [Indibacter alkaliphilus
LW1]
gi|403763317|gb|EJZ24285.1| glycine/D-amino acid oxidase, deaminating [Indibacter alkaliphilus
LW1]
Length = 415
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 136/321 (42%), Gaps = 46/321 (14%)
Query: 172 QTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYD 231
+ G ++I +TP+ E + GL+A+ L+ D+ + EP L V + A P D
Sbjct: 136 EKGLMMIYQTPQVEKEEIEFAHLARKHGLKADILTHQDISKIEPNLEV-KALGAVLFPGD 194
Query: 232 SQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKA 291
+ L +++ R KG EF L S +V +V T++ SK A
Sbjct: 195 AHLSPSSLFNFLKSNLR---KKG--VEFLTQQ-EVLGFEKSKRKVTSVITAEG---SKAA 245
Query: 292 --IVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGH 349
+++ G WS SL L ++P+ KG+ + +N +K
Sbjct: 246 GNVIICGGAWSASLAKLL------DFNLPMMGGKGYSFIQDNIPEIK------------- 286
Query: 350 HDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEF 409
IL+ A + + G + + AG + + + I++ +
Sbjct: 287 -----------QASILTEMKVAVSPYGQKIRFGGTMEIAGTDERINMNRVRGIFESINRY 335
Query: 410 YPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTA 469
YP R A F S + GLRP PDG P IGP PG V++ TGH +G+S+A GT
Sbjct: 336 YPDFR----AVFPSEENIWKGLRPCSPDGIPYIGPAPGYENVWVGTGHGMMGVSMATGTG 391
Query: 470 ELVADMVLTNPLKVDSAPFAV 490
+++AD+ + +D FAV
Sbjct: 392 KILADLHQGHAGTMDIKAFAV 412
>gi|392541570|ref|ZP_10288707.1| hydrogen cyanide synthase HcnC [Pseudoalteromonas piscicida JCM
20779]
Length = 401
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 179/443 (40%), Gaps = 81/443 (18%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+DVII G G+IG A L ++L +A+VD P A+ A G +W + + G
Sbjct: 4 YDVIIAGGGVIGAACAYFLSRDTNLKIALVDLKKP-GNASRASAGGLWAIGESVGLGCGV 62
Query: 137 ----------SE-----------------IWDLALRSNKLWKMLADS-LRDQGLDPLQVI 168
SE ++LAL+SN+L+ L + L +D
Sbjct: 63 IFFKTLSKLQSEGDTEAAQTLRPHQLPECFFELALKSNELYPALHEEMLARHDVD----F 118
Query: 169 GWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFL 228
+++TG I ++ + V + + +L L EP + F+
Sbjct: 119 KFERTGLKFIMYNRDDEIYADSIVSGIPNLSSQIRWLDQQQLRAEEPYITPDAIGAIDFI 178
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
D Q++ V +G R + F + V +LR + +V V+T +L+
Sbjct: 179 -CDHQVNPYRLVDAYTEGARQNGVE----LFLNTEVLEVLREGN--KVIGVRTQDQSLHC 231
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
+ ++ AAG W+ + H + +PV P KG +++ E + S Y+
Sbjct: 232 E-TLINAAGAWADDIYHQATGK-----HMPVYPVKGQIVLSERMPKVLNGCISTSDCYIA 285
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D +G+IL +GSS + GF+T I + + A +
Sbjct: 286 QKD---------NGEIL---------------IGSSTEEKGFDTTNSLDKITELSQGAMK 321
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
P L++ S ++ GLRP PD P++GPV G+ A GH G+ ++ T
Sbjct: 322 CLPVLKE------SSIKRCWAGLRPGTPDELPILGPVDGVEGYINACGHFRTGILMSAIT 375
Query: 469 AELVADMVLTNPLKVDSAPFAVQ 491
L+ +++ P VD APF V+
Sbjct: 376 GTLITELMTGKPTSVDLAPFRVE 398
>gi|456390061|gb|EMF55456.1| oxidoreductase [Streptomyces bottropensis ATCC 25435]
Length = 391
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 179/422 (42%), Gaps = 60/422 (14%)
Query: 77 SRCHTFDVIIIGAGIIGLTIA-RQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTP 135
SR HT DV+++G GIIGL A R L G + AV D A A +
Sbjct: 2 SRTHTSDVLVVGGGIIGLVTAWRAALRG--FATAVADPAPGGGAAQVAAGMLAAVTELHY 59
Query: 136 GSE-IWDLALRSNKLW-KMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
G + + L + S +L+ +A+ GLD +G+++ G+L + ++ L+E
Sbjct: 60 GEQTLLGLNMESARLYPDFVAELTEATGLD----LGYRRCGTLAVALDADDRAHLRELHA 115
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPY-DSQLD----AMLAVAYIEKGNR 248
+GL +E+LS D + EP L G R D Q+D + VA E+
Sbjct: 116 LQRRSGLDSEWLSGRDCRRLEPMLAPG--VRGGLRADGDHQIDPRRLSRALVAACERAGV 173
Query: 249 HFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLL 308
F + R E ++R +TG V+T + + +V+AAG SG L
Sbjct: 174 VF-HRARAEEL------SVVRERATG----VRTGDGDRLAAERVVLAAGSLSGRL----- 217
Query: 309 RETEIVLDI--PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILS 366
I D+ PV+P KG +L L + V + L P +
Sbjct: 218 --AGIPRDVVPPVRPVKGQVLRLTVPKPYAPFLSRTVRAVVRGSHVYLVPRE-------- 267
Query: 367 ISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRK 426
G LV+G++ + G++T V + + + A E P + +L L +
Sbjct: 268 ---------NGELVVGATSEEQGWDTTVTAGGVYELLRDAHELVPGITELPLTE------ 312
Query: 427 VRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSA 486
R GLRP PD P++GP GL + LATGH G+ L T +++A ++ T L +
Sbjct: 313 TRAGLRPASPDNAPLLGPT-GLDGLILATGHHRNGVLLTPVTGDVLAHVLTTGELPAQAR 371
Query: 487 PF 488
F
Sbjct: 372 DF 373
>gi|451983102|ref|ZP_21931397.1| Glycine oxidase ThiO [Pseudomonas aeruginosa 18A]
gi|451759236|emb|CCQ83920.1| Glycine oxidase ThiO [Pseudomonas aeruginosa 18A]
Length = 357
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 174/416 (41%), Gaps = 69/416 (16%)
Query: 87 IGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSEIWD 141
+GAG+IGL AR+L + + L V +V++ A+ AG G Y W +
Sbjct: 1 MGAGVIGLLTARELAL-AGLRVTLVERGESGREASWAGGGIVSPLYPWRYS----PAVTA 55
Query: 142 LALRSNKLWKMLADSLRDQ-GLDP-LQVIG--WKQTGSLLIGRTPEELVMLKERVKQLCE 197
LA S + L L D+ GLDP + +G W L + E L ++ + L E
Sbjct: 56 LAHWSQDFYPALGQRLLDETGLDPEVHTVGLYW-----LDLDDQTEALQWARKHTRPLKE 110
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
+ Y A P L G RA ++ + + + + FA+ +
Sbjct: 111 VPIEEAY-------AAVPGLGAGF-QRAVYMSGVANVRNPRLARSLRASLQQFANLELHE 162
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
+ V LR V V TS+ + K +++AAG WSG L+ L L++
Sbjct: 163 Q---TEVRGWLRDGD--RVVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLEL 210
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
PV P KG +++ Y D +L+ A G
Sbjct: 211 PVVPVKGQMIL-----------------YKCAADFLPR-------MVLAKGRYAIPRRDG 246
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
++++GS+ + +GF+ ++ + AAE P+L D+ + GLRP P+
Sbjct: 247 HILIGSTLEHSGFDKTPTDEALESLRASAAELLPELADMQPVAHWA------GLRPGSPE 300
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
G P IGPVPG ++L TGH GL LA + L+AD++ +D P+A GR
Sbjct: 301 GIPYIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADLMSGREPIIDPVPYAPAGR 356
>gi|388601624|ref|ZP_10160020.1| D-amino acid dehydrogenase small subunit [Vibrio campbellii DS40M4]
Length = 418
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 142/315 (45%), Gaps = 43/315 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R+ ++L +++ +K L ++G R + ++ ++ EP L + ++ +L
Sbjct: 133 RQLGTLQVFRSQQQLDAIEKDLKLLEQSGTRFQLMNVEQCIKQEPGLALVKEKLVGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D + + + + + + VT ++ VQT++ L+
Sbjct: 193 PDDETGDCFQFCQQLTELAKAHGVRFEFNTEVSNWVTV------GKKIMGVQTNRG-LFK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
V+A+G +S +L L++ EI DIPV P KG+ L + +K
Sbjct: 246 ADQFVLASGSYSTAL----LKQLEI--DIPVYPVKGYSLTV----PIKCEQ--------- 286
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
P + ++MT D I + + + AGF+ + Q + I +
Sbjct: 287 -----FAPRSTVMDETYKVAMTRFDDRIR---VAGTAELAGFDPSLPQKRKNTIEMVIRD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ D A+F S G RP PDG P+IG P +F TGH LG ++A G+
Sbjct: 339 LFPQSADFTQAEFWS------GFRPMTPDGTPIIGTTP-YENLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTNPLKV 483
+++AD++L + KV
Sbjct: 392 GQILADIMLNSDTKV 406
>gi|254238704|ref|ZP_04932027.1| hypothetical protein PACG_04867 [Pseudomonas aeruginosa C3719]
gi|392986212|ref|YP_006484799.1| D-amino acid oxidase [Pseudomonas aeruginosa DK2]
gi|419752094|ref|ZP_14278503.1| D-amino acid oxidase [Pseudomonas aeruginosa PADK2_CF510]
gi|126170635|gb|EAZ56146.1| hypothetical protein PACG_04867 [Pseudomonas aeruginosa C3719]
gi|384401671|gb|EIE48025.1| D-amino acid oxidase [Pseudomonas aeruginosa PADK2_CF510]
gi|392321717|gb|AFM67097.1| D-amino acid oxidase [Pseudomonas aeruginosa DK2]
Length = 358
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 174/417 (41%), Gaps = 69/417 (16%)
Query: 86 IIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSEIW 140
++GAG+IGL AR+L + + L V +V++ A+ AG G Y W +
Sbjct: 1 MVGAGVIGLLTARELAL-AGLRVTLVERGESGREASWAGGGIVSPLYPWRYS----PAVT 55
Query: 141 DLALRSNKLWKMLADSLRDQ-GLDP-LQVIG--WKQTGSLLIGRTPEELVMLKERVKQLC 196
LA S + L L D+ GLDP + +G W + E L ++ + L
Sbjct: 56 ALAHWSQDFYPALGQRLLDETGLDPEVHTVGLYWLDLDDQI-----EALQWARKHTRPLK 110
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRY 256
E + Y A P L G RA ++ + + + + FA+ +
Sbjct: 111 EVPIEEAY-------AAVPGLGAGF-QRAVYMSGVANVRNPRLARSLRASLQQFANIELH 162
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
+ V LR V V TS+ + K +++AAG WSG L+ L L+
Sbjct: 163 EQ---TEVRGWLRDGD--RVLGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLE 210
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
+PV P KG +++ Y D +L+ A
Sbjct: 211 LPVVPVKGQMIL-----------------YKCAADFLPR-------MVLAKGRYAIPRRD 246
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
G++++GS+ + +GF+ ++ + AAE P+L D+ + GLRP P
Sbjct: 247 GHILIGSTLEHSGFDKTPTDEALESLRASAAELLPELADMQPVAHWA------GLRPGSP 300
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
+G P IGPVPG ++L TGH GL LA + L+AD++ +D P+A GR
Sbjct: 301 EGIPYIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADLMSGREPIIDPVPYAPAGR 357
>gi|170747011|ref|YP_001753271.1| glycine oxidase ThiO [Methylobacterium radiotolerans JCM 2831]
gi|170653533|gb|ACB22588.1| glycine oxidase ThiO [Methylobacterium radiotolerans JCM 2831]
Length = 405
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 180/411 (43%), Gaps = 55/411 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIW-MVHRTPGSE-IW 140
DV ++GAG+IGL+IA +L +V V+++ +GA+ A G + PGS+ +
Sbjct: 30 DVAVVGAGLIGLSIAWRLAQAGS-AVTVLERDTIGAGASLAATGMLAPAAEHEPGSDPLL 88
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LAL S +LW D+L + + I ++ G+L++ +E+ L+ R +GL
Sbjct: 89 PLALDSLRLWPEFRDALEAES---GRAIDYRADGTLVLAVGRDEVERLRFRYDLQRRSGL 145
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
A +L S++ + EP L + P D Q+D L + + + R +
Sbjct: 146 EATWLPGSEVRRLEPGLRPSVTA-GIHCPLDHQVDPRLVMDALTEACR----RAGVILVE 200
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGS--LMHDLLRETEIVLDIP 318
PVT L S G V ++ + + + + + +++A+G WSG L+ D L +P
Sbjct: 201 RTPVTAL--DWSGGRVTGIR-AGDRVVAAETVILASGAWSGEGGLLPD-------ALALP 250
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
V+P KG L L + G + T + M +D G
Sbjct: 251 VRPLKGQSLALRT---------TARTGTLARMVWTEQ-----------VHMAPKSD--GQ 288
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++G++ + GF V + + + A P + ++ + S G RP D
Sbjct: 289 LIVGATVEDCGFRPGVTAGGLYALLEGARRVLPGIEEMEVEAVWS------GYRPTSDDD 342
Query: 439 KPVIGPV-PGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++ + PGL ATGH G LA TA+ VA +VL L + PF
Sbjct: 343 APILDAIAPGL---VAATGHHRNGYLLAPVTADAVAALVLRGALPAVARPF 390
>gi|444426814|ref|ZP_21222218.1| D-amino acid dehydrogenase small subunit [Vibrio campbellii CAIM
519 = NBRC 15631]
gi|444239912|gb|ELU51465.1| D-amino acid dehydrogenase small subunit [Vibrio campbellii CAIM
519 = NBRC 15631]
Length = 418
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 143/315 (45%), Gaps = 43/315 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R+ ++L +++ +K L ++G R + ++ ++ EP L + ++ +L
Sbjct: 133 RQLGTLQVFRSQQQLDAIEKDLKLLEQSGTRFQLMNVEQCIKQEPGLALVKEKLVGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D + ++ + G EF + + ++ VQT ++ L+
Sbjct: 193 PDDETGDCF---QFCQQLTELAKAHGVRFEFNTEVSNWVAVGK---KIMGVQTDRD-LFR 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
V+A+G +S +L L++ EI DIPV P KG+ L + +K
Sbjct: 246 ADQFVLASGSYSTAL----LKQLEI--DIPVYPVKGYSLTV----PIKCEQ--------- 286
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
P + ++MT D I + + + AGF+ + Q + I +
Sbjct: 287 -----FAPRSTVMDETYKVAMTRFDDRIR---VAGTAELAGFDPSLPQKRKNTIEMVIRD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ D A+F S G RP PDG P+IG P +F TGH LG ++A G+
Sbjct: 339 LFPQSADFTQAEFWS------GFRPMTPDGTPIIGATP-YENLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTNPLKV 483
+++AD++L + KV
Sbjct: 392 GQILADIMLNSDTKV 406
>gi|224477561|ref|YP_002635167.1| putative glycine oxidase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222422168|emb|CAL28982.1| putative glycine oxidase [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 375
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 192/419 (45%), Gaps = 62/419 (14%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIW 140
FD+II+GAG+IG++IAR L S + +A++D+ + A+ G + + S ++
Sbjct: 2 FDLIIVGAGVIGMSIARH-LKDSGMQIALIDRDIEGQHASYKAGGMLGAQNEFKEDSPLF 60
Query: 141 DLALRSNKLWKMLADSL-RDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
LAL+S + + L+ +L ++ G+D I ++Q G + I +++ L ++ + L +
Sbjct: 61 RLALKSREKFNDLSIALEKETGID----IQYQQNGLIKIATNEKDIDALHQQYEFLHQHD 116
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
+ LS++DL + +V F+P+D Q++A Y + + S G F
Sbjct: 117 DDVQDLSNTDLGEL-THYLVKSSEAMMFVPHDHQINAN---HYTKALHASLKSDGAVIRF 172
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
H V + + V ++ + + + +VVAAG W+G L D +EI V
Sbjct: 173 NHTNVENIKHEDHHYTVSIKHENEMSELTAEKVVVAAGAWAGFLAPD----SEI--QERV 226
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI--- 376
KG +L++EN DL L ++ MT ++
Sbjct: 227 SGVKGEVLLVEN------------------EDLDLKQ---------TLFMTNGCYIVPKP 259
Query: 377 -GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI--GLRP 433
++G++ F ++ V + + + A E P+L S+R+++ G+RP
Sbjct: 260 PNRFLIGATSYFDNYSVGVSTEGKEWLLREAIERVPEL--------ASSREIKYWSGVRP 311
Query: 434 YMPDGKPVIGPV-PGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
+ +P++ PGL ++ TGH G+ L+ EL+A+ + T+ + APF ++
Sbjct: 312 WTQGEQPIMDETNPGL---WVITGHYRNGILLSPIIGELMAEWLKTDERPEELAPFKLR 367
>gi|107099788|ref|ZP_01363706.1| hypothetical protein PaerPA_01000806 [Pseudomonas aeruginosa PACS2]
gi|424944685|ref|ZP_18360448.1| probable D-amino acid oxidase [Pseudomonas aeruginosa NCMG1179]
gi|346061131|dbj|GAA21014.1| probable D-amino acid oxidase [Pseudomonas aeruginosa NCMG1179]
Length = 357
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 174/416 (41%), Gaps = 69/416 (16%)
Query: 87 IGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSEIWD 141
+GAG+IGL AR+L + + L V +V++ A+ AG G Y W +
Sbjct: 1 MGAGVIGLLTARELAL-AGLRVTLVERGESGREASWAGGGIVSPLYPWRYS----PAVTA 55
Query: 142 LALRSNKLWKMLADSLRDQ-GLDP-LQVIG--WKQTGSLLIGRTPEELVMLKERVKQLCE 197
LA S + L L D+ GLDP + +G W L + E L ++ + L E
Sbjct: 56 LAHWSQDFYPALGQRLLDETGLDPEVHTVGLYW-----LDLDDQTEALQWARKHTRPLKE 110
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
+ Y A P L G RA ++ + + + + FA+ +
Sbjct: 111 VPIEEAY-------AAVPGLGAGF-QRAVYMSGVANVRNPRLARSLRASLQQFANIELHE 162
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
+ V LR V V TS+ + K +++AAG WSG L+ L L++
Sbjct: 163 Q---TEVRGWLRDGD--RVLGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLEL 210
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
PV P KG +++ Y D +L+ A G
Sbjct: 211 PVVPVKGQMIL-----------------YKCAADFLPR-------MVLAKGRYAIPRRDG 246
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
++++GS+ + +GF+ ++ + AAE P+L D+ + GLRP P+
Sbjct: 247 HILIGSTLEHSGFDKTPTDEALESLRASAAELLPELADMQPVAHWA------GLRPGSPE 300
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
G P IGPVPG ++L TGH GL LA + L+AD++ +D P+A GR
Sbjct: 301 GIPYIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADLMSGREPIIDPVPYAPAGR 356
>gi|445058764|ref|YP_007384168.1| FAD dependent oxidoreductase family protein [Staphylococcus warneri
SG1]
gi|443424821|gb|AGC89724.1| FAD dependent oxidoreductase family protein [Staphylococcus warneri
SG1]
Length = 371
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 184/414 (44%), Gaps = 61/414 (14%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IARQ L S L +A+VD+ +P A+ G + + T SE++
Sbjct: 3 DVLIIGSGVIGMSIARQ-LNQSHLDIAIVDRDIPGMHASYKAGGMLGAQNEFTTDSELFQ 61
Query: 142 LALRSNKLWKMLADSL-RDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S L+ L+D+L + G+D I ++Q+G + + + +++ L ++ L
Sbjct: 62 LAVASRSLFPELSDALYHETGID----IEFQQSGLIKMASSTKDVKWLTQQYAFLKSKDP 117
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
E LS +L + + D A ++P D Q++A + K + +Y
Sbjct: 118 SVELLSDDELFNLSNDHVEPTD-LAIYIPKDGQINA----NHYTKALLQSIIQRDVHRYY 172
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
V + +N V T+ +Y+KK ++VA G WS L+ D +++
Sbjct: 173 QTEVKHIHHNNG---FYTVTTNNANIYAKK-VIVAGGAWSTQLLKDYAIPRQVI------ 222
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI---- 376
KG +L++E SLKLNH ++ MT ++
Sbjct: 223 GVKGEVLLVEQ-PSLKLNH--------------------------TVFMTNGCYIVPKEK 255
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
++G++ +F ++ I + A + P L + + K G+RPY
Sbjct: 256 HRYLIGATSEFNNYSVGNSDLGISWLLNHAQQRIPGLSNGHIL------KQWSGIRPYTE 309
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
P++ + +F+ TGH G+ L+ + +A+ +L+ V + F++
Sbjct: 310 HELPIMDQID--DGLFIITGHYRNGILLSPKIGQDIANWLLSGIKPVSYSAFSL 361
>gi|339492953|ref|YP_004713246.1| FAD-binding oxidoreductase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|338800325|gb|AEJ04157.1| FAD-binding oxidoreductase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 365
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 109/233 (46%), Gaps = 39/233 (16%)
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H PV L+ S + V+T++ +++++ +VVAAG WS L+ L L+IPVK
Sbjct: 170 HCPVEGFLQDGS--RIVGVRTAQGDMHAEQ-VVVAAGAWSAQLLATL------GLEIPVK 220
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P KG +++ F + SM +L+ A G+++
Sbjct: 221 PMKGQMIL---FKCAEDFLPSM---------------------VLAKRRYAIPRRDGHIL 256
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GS+ + GF+ + + + A E P L + + + GLRP PDG P
Sbjct: 257 VGSTLEDVGFDKTPTEDALQSLRATAIELLPALANAQVVRHWA------GLRPGSPDGVP 310
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
IGPV G ++L GH GL LA + +L+AD++L VD AP+A GR
Sbjct: 311 YIGPVSGFDGLWLNCGHFRNGLVLAPASCQLLADLMLGREPIVDPAPYAPTGR 363
>gi|121535938|ref|ZP_01667733.1| FAD dependent oxidoreductase [Thermosinus carboxydivorans Nor1]
gi|121305466|gb|EAX46413.1| FAD dependent oxidoreductase [Thermosinus carboxydivorans Nor1]
Length = 374
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 169/393 (43%), Gaps = 76/393 (19%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V ++++ G +GA G+I M + PG + +LAL S L++ L++ L
Sbjct: 30 VTLLERETIAGGTSGACDGFIIMQSKAPGPHL-ELALESAALYRTLSEELEYD------- 81
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
+ +K G ++I + ++ E V + AGL E L S++ + EP L+ + A +
Sbjct: 82 LEYKPCGGMIIIEDEIQAALMAEVVAKQRAAGLAVEMLPISEVRRREP-LLAADLWGATY 140
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
P D+Q++ +L + R + R VT L+ G V V T+K
Sbjct: 141 SPVDAQVNPILVAQGFSQAARRLGAAIRTGV----EVTGLIVEQ--GRVRGVATAKGERL 194
Query: 288 SKKAIVVAAGCWSGSLM--HDLLRETEIVLDIPVKPRKGHLLVLENFNSL---------- 335
S +V AAG W+ +L+ H + D+P+ PR+G +LV E +
Sbjct: 195 SADVVVNAAGVWAPALVKPHGV--------DLPITPRRGQILVSEPLPPMISHVLLCACY 246
Query: 336 ------------KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
+ H + G L++ AT G L++GS
Sbjct: 247 LTAKYRPQDLDQRSRHHRLGVG-------------------LAVEQAAT----GGLLIGS 283
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
+R+F GF+ + + A P L + + + GLRP+ P G P++G
Sbjct: 284 TREFVGFDRRTTLAGLAAVASHVARILPALAGVNIIRSFA------GLRPHTPTGLPLLG 337
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
P+P L + +A GHEG G++LA T + VA+ +
Sbjct: 338 PLPELPGLIMAAGHEGDGIALAPITGKRVAEYI 370
>gi|390942361|ref|YP_006406122.1| glycine/D-amino acid oxidase, deaminating [Belliella baltica DSM
15883]
gi|390415789|gb|AFL83367.1| glycine/D-amino acid oxidase, deaminating [Belliella baltica DSM
15883]
Length = 415
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 131/310 (42%), Gaps = 46/310 (14%)
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
+G + G +++ +TPE E + GL AE L+ D+ Q EP L V +R A
Sbjct: 131 LGLVEKGLMMLYQTPEVEKEEIEFAHLARKHGLEAEILTPDDIAQVEPNLKV--KARGAI 188
Query: 228 L-PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTL 286
L P D+ L Y++ + SKG + ++ L +V AV T + +
Sbjct: 189 LFPGDAHLSPSALYNYLK---TYLKSKGVT---FKSNLSVLGFEKKGAKVSAVITPEGAI 242
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
+ ++ G WSG L L +P+ KG+ V EN
Sbjct: 243 EGDQ-FILCGGAWSGELAKML------GFKLPMMGGKGYSFVQEN--------------- 280
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV-LGSSRQFAGFNTEVEQTIIDRIWKR 405
P ++ IL+ M GN V G + + AG N + + I++
Sbjct: 281 --------QP-EILRASILT-EMKVAVSPYGNQVRFGGTMEIAGTNENININRVKGIFES 330
Query: 406 AAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLA 465
FYP + + F ++ +V GLRP PDG P IG PGL V + +GH +G+S+A
Sbjct: 331 INRFYPDFQ----SKFPNHEEVWKGLRPCSPDGLPYIGQAPGLENVLVGSGHGMMGISMA 386
Query: 466 LGTAELVADM 475
GT +L+ +
Sbjct: 387 PGTGKLLCQI 396
>gi|312883278|ref|ZP_07743004.1| hydrogen cyanide synthase HcnC [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368894|gb|EFP96420.1| hydrogen cyanide synthase HcnC [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 417
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 183/443 (41%), Gaps = 83/443 (18%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG---- 136
TFDV+I G G+IG +IA L DL +A+VD P A+ A G +W + + G
Sbjct: 3 TFDVVICGGGVIGSSIAYFLSKNKDLKIALVDFKHP-GNASRASAGGLWPMGESTGLGCG 61
Query: 137 ----------------------------SEIWDLALRSNKLWKMLADSLRD-QGLDPLQV 167
+D+A++SN ++ L + L++ +D
Sbjct: 62 VILFKTLSKQMQESGSGVTPQMSPHIMPKPFFDMAMQSNAMYPSLYEELKENHNVD---- 117
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
+++TG + + + + + E +LS S+L EP + + F
Sbjct: 118 FKFERTGLKFVMFDKYDKMYAEHIAAAVPERKNHIAWLSQSELRMQEPNVSLDAIGAMQF 177
Query: 228 LPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTL 286
D Q++ L AY+E A++ E + + + + + AV T + L
Sbjct: 178 -DCDHQVNPYRLNEAYLE------AARQNGVELFLNTKIVGIEKDGN-RISAVNTEQGRL 229
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
+ KA+V +AG W+ + + + +PV P KG ++V E + + Y
Sbjct: 230 -ACKAVVNSAGAWA-----ETISKWATGYPLPVFPVKGQVIVTEKLPKVLNGCLTTSDCY 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
+ D +G+IL +GS+ + GF+ + I ++ A
Sbjct: 284 IAQKD---------NGEIL---------------IGSTTEEKGFDVTNDIKYIKQLGMGA 319
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ P L+D+ + ++ GLRP PD P++G VPG+ F A GH G+ +
Sbjct: 320 IKSLPILKDMNI------KRCWAGLRPGSPDELPILGSVPGVEGYFNACGHFRTGILTSA 373
Query: 467 GTAELVADMVLTNPLKVDSAPFA 489
T +++ ++ ++D APF+
Sbjct: 374 ITGKVMNQIIRGLKPEIDIAPFS 396
>gi|431928454|ref|YP_007241488.1| glycine oxidase [Pseudomonas stutzeri RCH2]
gi|431826741|gb|AGA87858.1| glycine oxidase [Pseudomonas stutzeri RCH2]
Length = 369
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
PV LR + + VQT++ + + + +VVAAG WS L+ L L+IPVKP
Sbjct: 172 PVKGFLRDGT--RIVGVQTAQGEMRADQ-VVVAAGAWSAQLLATL------GLEIPVKPM 222
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KG +++ F + SM +L+ A G++++G
Sbjct: 223 KGQMIL---FKCAEDFLPSM---------------------VLAKRRYAIPRRDGHILVG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
S+ + GF+ + ++ + A E P L D + K GLRP PDG P I
Sbjct: 259 STLEDVGFDKTPTEDALESLRATAIELLPALADAQVV------KHWAGLRPGSPDGVPYI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GPV G ++L GH GL LA + +L+ D++L VD +P+A GR
Sbjct: 313 GPVSGFDGLWLNCGHFRNGLVLAPASCQLLVDLMLGQAPIVDPSPYAPAGR 363
>gi|260773369|ref|ZP_05882285.1| D-amino acid dehydrogenase small subunit [Vibrio metschnikovii CIP
69.14]
gi|260612508|gb|EEX37711.1| D-amino acid dehydrogenase small subunit [Vibrio metschnikovii CIP
69.14]
Length = 421
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 139/322 (43%), Gaps = 43/322 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L E+G R E + + L+ EP L +D +L
Sbjct: 133 RQKGTLQVFRKQKQLQAVEKDMQLLEESGTRFELMDVAGCLKQEPGLTPVQDKLVGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + ++ SKG EF + V LL + ++ VQT K L +
Sbjct: 193 PDDETGDCYL---FCQQLTELAKSKGVRFEF-NTQVQGLLSEGN--KITGVQTDKGLLKA 246
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S +L+ +D+PV P KG+ L V
Sbjct: 247 D-AYVVAMGSYSPALLKPF------GIDLPVYPVKGYSLT------------------VP 281
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D P + +++T + I + + + AGF+ + + I +
Sbjct: 282 IRDADFAPQSTVMDETYKVALTRFDERI---RVAGTAELAGFDPSIPEARKATIEMVVKD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ + + G RP PDG P+IG L ++ TGH LG ++A G+
Sbjct: 339 LFPQ------GGYFEQAEFWTGFRPMTPDGTPIIGATK-LDNLYTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTNPLKVDSAPFAV 490
A L+AD++ P K+ ++ V
Sbjct: 392 ASLLADIISQRPSKIKTSELNV 413
>gi|304396144|ref|ZP_07378026.1| FAD dependent oxidoreductase [Pantoea sp. aB]
gi|304356513|gb|EFM20878.1| FAD dependent oxidoreductase [Pantoea sp. aB]
Length = 433
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 135/309 (43%), Gaps = 46/309 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++ + + L +AG+ E L + +L + EP L + L
Sbjct: 133 RQGGTLQLFRTQQQFDSASKDIAVLRDAGVPYELLEAHELSRVEPALAATQHKLTGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + K A + ++ PV LLR + + V+ + + +
Sbjct: 193 PNDETGDCQLFTQRLAK----MAEEAGVVFRFNTPVDHLLRDGN--RIYGVKCGEEIIKA 246
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
+ VVA G +S +L+ + V+DIPV P KG+ L + N
Sbjct: 247 D-SYVVAFGSYSTALLKN-------VIDIPVYPLKGYSLTIPIKN--------------- 283
Query: 349 HHDLTLHPGQVNHGQILSISM-TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAA 407
P IL + A T + +G + GFNT + + + + +
Sbjct: 284 -------PDAAPVSTILDETYKVAVTRFDDRIRVGGMAEIVGFNTRLTEARRETLEMVVS 336
Query: 408 EFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALG 467
+ YP+ + A F + GLRP PDG P++G P +S ++L TGH LG ++A G
Sbjct: 337 DLYPEGGHVAQASFWT------GLRPMTPDGTPIVGATP-ISNLWLNTGHGTLGWTMACG 389
Query: 468 TAELVADMV 476
+ +L+AD++
Sbjct: 390 SGQLLADLI 398
>gi|229588323|ref|YP_002870442.1| putative oxidoreductase [Pseudomonas fluorescens SBW25]
gi|229360189|emb|CAY47046.1| putative oxidoreductase [Pseudomonas fluorescens SBW25]
Length = 369
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 37/221 (16%)
Query: 273 TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENF 332
G V V T++ + + +V+AAG WSG L+ L L +PV+P KG +++ +
Sbjct: 182 AGSVVGVNTAQGPVLGDQ-VVLAAGAWSGELLGTL------GLSLPVEPVKGQMILYKCA 234
Query: 333 NSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNT 392
+ +SM +L+ A G++++GS+ + GF+
Sbjct: 235 SDFL---SSM---------------------VLAKGRYAIPRRDGHILIGSTLEHEGFDK 270
Query: 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVF 452
++ + A E P L D A+ + + GLRP P+G P IGPVPG ++
Sbjct: 271 TPTDKALESLKASAVELIPALAD---AEVVGHWA---GLRPGSPEGIPYIGPVPGFKGLW 324
Query: 453 LATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
L GH GL LA + +L AD++L +D AP+A +GR
Sbjct: 325 LNCGHYRNGLVLAPASCQLFADLLLMRAPIIDPAPYAPEGR 365
>gi|28897397|ref|NP_797002.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
RIMD 2210633]
gi|260363541|ref|ZP_05776370.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
K5030]
gi|260876356|ref|ZP_05888711.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
AN-5034]
gi|260898627|ref|ZP_05907123.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
Peru-466]
gi|260899273|ref|ZP_05907668.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
AQ4037]
gi|28805609|dbj|BAC58886.1| D-amino acid dehydrogenase, small subunit [Vibrio parahaemolyticus
RIMD 2210633]
gi|308086974|gb|EFO36669.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
Peru-466]
gi|308092932|gb|EFO42627.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
AN-5034]
gi|308106645|gb|EFO44185.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
AQ4037]
gi|308113017|gb|EFO50557.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
K5030]
Length = 418
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 134/315 (42%), Gaps = 43/315 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++L +++ +K L ++G R E + L+ EP L + +D +L
Sbjct: 133 RQFGTLQVFRTTQQLTAIEKDLKLLEQSGTRFELMDVEQCLRQEPGLALVKDKIVGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D + + + ++ + VT ++ VQT+ L+
Sbjct: 193 PDDETGDCFQFCQQLTELAKAHGVTFKFNTEVSNWVTV------GKKIIGVQTNHG-LFK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
VVA+G +S +L+ L +DIPV P KG+ L L N
Sbjct: 246 ADQFVVASGSFSTALLKQL------DIDIPVYPVKGYSLTLPIENE-------------- 285
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
P + ++MT D I + + + AGF+ + Q + I +
Sbjct: 286 ----EYAPRSTVMDETYKVAMTRFDDRIR---VAGTAELAGFDPSLPQKRKNTIEMVVRD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ D A+F + G RP PDG P+IG P +F TGH LG ++A G+
Sbjct: 339 LFPRGGDFSQAEFWT------GFRPMTPDGTPIIGATP-YDNLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTNPLKV 483
L+A+++ K+
Sbjct: 392 GHLLANIMTGEKAKI 406
>gi|440759619|ref|ZP_20938752.1| D-amino acid dehydrogenase small subunit [Pantoea agglomerans 299R]
gi|436426688|gb|ELP24392.1| D-amino acid dehydrogenase small subunit [Pantoea agglomerans 299R]
Length = 421
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 135/309 (43%), Gaps = 46/309 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++ + + L +AG+ E L + +L + EP L + L
Sbjct: 121 RQGGTLQLFRTQQQFDSASKDIAVLRDAGVPYELLEAHELSRVEPALAATQHKLTGGLRL 180
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + K A + ++ PV LLR + + V+ + + +
Sbjct: 181 PNDETGDCQLFTQRLAK----MAEEAGVVFRFNTPVDHLLRDGN--RIYGVKCGEEIIKA 234
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
+ VVA G +S +L+ + V+DIPV P KG+ L + N
Sbjct: 235 D-SYVVAFGSYSTALLKN-------VIDIPVYPLKGYSLTIPIKN--------------- 271
Query: 349 HHDLTLHPGQVNHGQILSISM-TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAA 407
P IL + A T + +G + GFNT + + + + +
Sbjct: 272 -------PDAAPVSTILDETYKVAVTRFDDRIRVGGMAEIVGFNTRLTEARRETLEMVVS 324
Query: 408 EFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALG 467
+ YP+ + A F + GLRP PDG P++G P +S ++L TGH LG ++A G
Sbjct: 325 DLYPEGGHVAQASFWT------GLRPMTPDGTPIVGATP-ISNLWLNTGHGTLGWTMACG 377
Query: 468 TAELVADMV 476
+ +L+AD++
Sbjct: 378 SGQLLADLI 386
>gi|374705462|ref|ZP_09712332.1| glycine oxidase ThiO [Pseudomonas sp. S9]
Length = 361
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H PV+ +R V VQT + + + +V+AAG WS L+ I +++PV+
Sbjct: 167 HSPVSGFIRDGQ--RVVGVQTVSGAVMADQ-VVLAAGAWSAELLR------PIGIELPVE 217
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P KG +++ + + SM +L+ A G+++
Sbjct: 218 PVKGQMILYKCADDFL---PSM---------------------VLAKGRYAIPRRDGHIL 253
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GS+ ++ GF+ + + A E P L D A + + GLRP P+G P
Sbjct: 254 IGSTLEYEGFDKTPTDVALQSLKASAEELLPALAD---AQVVGHWA---GLRPSSPEGIP 307
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
IGP+PG ++L GH GL LA + +L+AD++ +D AP+A +GR
Sbjct: 308 FIGPLPGFDGLWLNCGHYRNGLVLAPASCQLLADLMQGRAPIIDPAPYAPEGR 360
>gi|77165732|ref|YP_344257.1| FAD dependent oxidoreductase [Nitrosococcus oceani ATCC 19707]
gi|254434468|ref|ZP_05047976.1| glycine oxidase ThiO [Nitrosococcus oceani AFC27]
gi|76884046|gb|ABA58727.1| FAD dependent oxidoreductase [Nitrosococcus oceani ATCC 19707]
gi|207090801|gb|EDZ68072.1| glycine oxidase ThiO [Nitrosococcus oceani AFC27]
Length = 376
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 178/416 (42%), Gaps = 70/416 (16%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGS 137
DV+IIG G++G+ AR+L + S L V ++++ A+ AG G Y W R P
Sbjct: 3 DVVIIGGGLMGMLSARELRL-SGLKVVLIERGQAGQEASWAGGGILSPLYPW---RYPDG 58
Query: 138 EIWDLALRSNKLWKMLADSL-RDQGLDPLQVIGWKQTGSLLIGRTPEELVMLK--ERVKQ 194
+ LA S ++ L L R+ G+DP W +G L++G E L + ER K
Sbjct: 59 -VSALAAWSQARYEGLCQDLWRESGVDP----EWTLSGLLMLGVVAEGLEARRWAERWKA 113
Query: 195 LCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFAS 252
+ E D Q E L GED+ AA ++P +Q+ V + + +
Sbjct: 114 VLEV------FKGCDPRQWEGAL--GEDAGAAGLWMPKVAQVRPPRLVRALRQSLKKLGV 165
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312
+ T LL N T + V T +L +++ +VVA G WSG + TE
Sbjct: 166 E----VLEGVKATGLLVRNQT--ITGVATEGASLAAER-VVVAGGAWSGQFL------TE 212
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+ +PV+P +G +++ L L+ M GY L P + H
Sbjct: 213 SGIHLPVEPVRGQMILFRGQPGL-LSKMIMGRGYY------LIPRRDGH----------- 254
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
++ GS+ ++ GF+ + + A P L+ L + + GLR
Sbjct: 255 ------ILAGSTLEYTGFDKSTTAEASKELREAAYTLVPALKSLPVTHQWA------GLR 302
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P P G P IG P + +++ GH G+ A +A L+ D++L +D AP+
Sbjct: 303 PGSPQGIPYIGAHPAIKGLYVNAGHFRNGVVTAPASACLLRDILLERTSSLDPAPY 358
>gi|154249282|ref|YP_001410107.1| FAD dependent oxidoreductase [Fervidobacterium nodosum Rt17-B1]
gi|154153218|gb|ABS60450.1| FAD dependent oxidoreductase [Fervidobacterium nodosum Rt17-B1]
Length = 390
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 165/401 (41%), Gaps = 58/401 (14%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD 141
++V IIG GI G +A L + SVAV +K SG+TG G I T +
Sbjct: 14 YNVCIIGGGITGTALAYFLCKLGERSVAVFEKSYLSSGSTGRCAGGIRQQWSTRSN--VR 71
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
LA+RS KL++ + D G+D I + Q G L++ EE ++ V+ E GL
Sbjct: 72 LAMRSVKLFERFKE---DVGMD----IEYFQGGYLVLSYDEEEAAQFEKNVQMQKEEGLN 124
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYH 261
E LS + + P + A F D + AV + R + H
Sbjct: 125 VEILSPRQVKEKYPYINTDGLLMATFCQTDGHANPHKAVIGYAQAIRRMGGH----IYTH 180
Query: 262 DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET-EIV-LDIPV 319
V + G+V V TS N + +V AAG WS RET E+V +D+P
Sbjct: 181 TEVKGI--DVQAGKVIGVDTS-NGYFKCNVVVNAAGPWS--------RETSEMVGVDLPT 229
Query: 320 KPRKGHLLV---LENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
+ + ++V LENF + M + G+ + Q HGQ V+
Sbjct: 230 ESYRHQIIVTEALENFFPM------MAISFSGN----FYMRQTQHGQF----------VL 269
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
G G + G N V + + + +P L+++ + S G+ P
Sbjct: 270 GQ---GDKDEKPGINYNVTFRFEEELISKMVRTFPFLKNVRMMRHWS------GMYNMSP 320
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
D +P+IG + + A G+ G G +A E +A+++L
Sbjct: 321 DAQPIIGQSDKVKGYYYAVGYSGHGFMVAPAVGEALAELIL 361
>gi|359781082|ref|ZP_09284307.1| FAD dependent oxidoreductase [Pseudomonas psychrotolerans L19]
gi|359371142|gb|EHK71708.1| FAD dependent oxidoreductase [Pseudomonas psychrotolerans L19]
Length = 371
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 164/385 (42%), Gaps = 59/385 (15%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV 167
V V+D +P GA+ AG G++ ++ P L+ RS LW+ L L
Sbjct: 30 VRVLDAGLP--GASAAGMGHLVVMDDDPAE--LTLSARSVALWRELVPQLP-------AA 78
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF 227
++ G+L + R EL +++ + ++L G+ + L+++ AEP L S
Sbjct: 79 ADYRNCGTLWLARDAAELDLIEAKRQRLDAQGVANQPLNAAATAAAEPALTALAGSLE-- 136
Query: 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
+P D L A + A++ P+ R+ V AV+ S+ L
Sbjct: 137 VPGDGLLYAPVVAAWL---------------LQRSPLIEFQRAR----VIAVEGSRVRLD 177
Query: 288 SKKAIVVAAGCWSGSLMHDL---LRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEA 344
G W + L L+ + D+P+ P+KGHLL+ + + ++ H +E
Sbjct: 178 D--------GRWLAADAVVLAAGLQAASLCPDLPLVPKKGHLLITDRYPE-QVRHQLVEI 228
Query: 345 GYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWK 404
GY + S++ G L++GSSRQF + VE ++ ++ +
Sbjct: 229 GYGA---------SAHASSGASVAFNVQPRPTGQLLIGSSRQFERPDMAVEPAVVGQLLR 279
Query: 405 RAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
RA +F P L L + G R PDG P+IG P ++LA GHEGLG++
Sbjct: 280 RALDFLPGLAHTSLI------RGWTGQRAASPDGLPLIGTHPDQPGLWLAVGHEGLGVTT 333
Query: 465 ALGTAELVADMVLTNPLKVDSAPFA 489
A TAE +A + PFA
Sbjct: 334 APATAEAIASGLFGERTTFHVEPFA 358
>gi|260771343|ref|ZP_05880269.1| D-amino acid dehydrogenase small subunit [Vibrio furnissii CIP
102972]
gi|260613659|gb|EEX38852.1| D-amino acid dehydrogenase small subunit [Vibrio furnissii CIP
102972]
Length = 420
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 137/318 (43%), Gaps = 43/318 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++LV +++ ++ L E+G+R E ++ + EP L +D +L
Sbjct: 133 RQQGTLQVFRDEKQLVSIEKDMRLLEESGVRFELMNVDSCIAQEPGLSPVKDKLVGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + + +K F D L + ++ VQT+K L
Sbjct: 193 PDDETGDCYLFCQQMTE-----LAKAHGVRFEFDTQIKSLATEGK-KIVGVQTNKG-LLK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S +++ L +DIPV P KG+ L + N
Sbjct: 246 ADAYVVALGSFSTAMLKPL------GIDIPVYPVKGYSLTVPIVNP-------------- 285
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
L P + +++T D I + + + AGF+ + + I +
Sbjct: 286 ----ELSPQSTVMDETYKVALTRFDDRIR---VAGTAELAGFDPSIPTARKETIEMVVRD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ D A F + G RP PDG P+IG +F TGH LG ++A G+
Sbjct: 339 LFPQGGDFDQAQFWT------GFRPMTPDGTPIIGATQ-FDNLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTNPLKVDSA 486
A L+AD++ ++D++
Sbjct: 392 AHLLADIMTRGKAEIDTS 409
>gi|261252193|ref|ZP_05944766.1| D-amino acid dehydrogenase small subunit [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|417955670|ref|ZP_12598679.1| D-amino acid dehydrogenase small subunit [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|260935584|gb|EEX91573.1| D-amino acid dehydrogenase small subunit [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|342812324|gb|EGU47328.1| D-amino acid dehydrogenase small subunit [Vibrio orientalis CIP
102891 = ATCC 33934]
Length = 416
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 133/311 (42%), Gaps = 43/311 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL--MVGEDSRAAFL 228
K G+L I R +L +K+ + L E+G R + +S + L EP L M G +L
Sbjct: 133 KTQGTLQIFRKQAQLSAIKKDIALLEESGTRYQLMSPKECLTQEPGLSSMEGSLVGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L ++ A + ++ + LL N + V+TS+ + +
Sbjct: 193 PDDETGDCYLFCQQLQS----MAEQAGVQFLFNTEIEQLLVDNH--RIAGVKTSQGIIEA 246
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
V+A G +S L+ L +DIPV P KG+ L L + H+++
Sbjct: 247 DH-YVMALGSYSKHLLQPL------SIDIPVYPVKGYSLTLPVVDEAHAPHSTI------ 293
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D T Q + ++ TA + AGF+ + + + + +
Sbjct: 294 -MDETYKVAVTRFDQRIRVAGTA--------------ELAGFDPSLPEKRLATLNHVVRQ 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+PK D AD+ S G RP PDG P+IG P S ++ TGH LG ++A G+
Sbjct: 339 LFPKGVDFNQADYWS------GFRPMTPDGTPIIGQTP-YSNLYTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTN 479
A ++ +++ T
Sbjct: 392 ANILTEILATQ 402
>gi|312884316|ref|ZP_07744025.1| D-amino acid dehydrogenase small subunit [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309368089|gb|EFP95632.1| D-amino acid dehydrogenase small subunit [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 416
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 182/444 (40%), Gaps = 92/444 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGAT---GAGQ---GYI--WMVHRTP 135
VI++G+G+IGLT A L + SV V+D+ + T AGQ GY W P
Sbjct: 3 VIVLGSGVIGLTSA-WYLSQAGCSVTVIDRQNSAAKETSFANAGQISYGYSSPWAAPGVP 61
Query: 136 GSEI-WDLALRS-------------NKLWKMLADSLRD-----------------QGLD- 163
+ W + + N KML++ D Q LD
Sbjct: 62 LKAMKWLFSTHAPLKVSPKLSLEMVNWCGKMLSNCRLDRYQINKSRMLTIAARSQQCLDL 121
Query: 164 -----PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP--E 216
LQ G K+ G+L I R PE+L +++ + L L S L EP E
Sbjct: 122 LNEKYQLQYQGRKK-GTLQIFRKPEQLRDIEKDIAVLEANNTSFSLLDRSACLAKEPGLE 180
Query: 217 LMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST-GE 275
M G+ LP D D L ++K ++ +F D T + R ++ +
Sbjct: 181 QMKGQLVGGLHLPDDQTGDCFLFCQQLQK-----LAQAAGVKFLFD--TSITRIHTKKNQ 233
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V +V+TSK +S VVA G S +L+ I + P+ P KG+ L L
Sbjct: 234 VTSVETSKGQ-FSADQYVVALGSHSKALLK------HIKIHTPIYPVKGYSLTLPVI--- 283
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
D P + +++T + I + + + AGFNT++
Sbjct: 284 ---------------DNQFAPRSTILDETYKVALTRFDNRIR---VAGTAELAGFNTKLP 325
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+ + +P+ D AD+ + GLRP PDG P+IGP P + ++L T
Sbjct: 326 GKRLATLNHCVNSLFPRGTDFTQADYWT------GLRPMTPDGPPIIGPTP-VKNLYLNT 378
Query: 456 GHEGLGLSLALGTAELVADMVLTN 479
GH LG +LA G+A+++ + V++
Sbjct: 379 GHGTLGWTLACGSADILTEAVVSQ 402
>gi|145596399|ref|YP_001160696.1| glycine oxidase ThiO [Salinispora tropica CNB-440]
gi|145305736|gb|ABP56318.1| glycine oxidase ThiO [Salinispora tropica CNB-440]
Length = 385
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 164/412 (39%), Gaps = 69/412 (16%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRT--PGSEIW 140
DV ++GAG IGL IA + V L V V D P SGA A G + V E+
Sbjct: 8 DVAVVGAGPIGLAIAWRCAV-RGLRVVVHDPD-PGSGAVYAAAGMLAPVAEAYFGEHELT 65
Query: 141 DLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
L S W A L G D +G++ G+L++G T ++L + + G
Sbjct: 66 GLLTESAARWPAFAAELAAASGTD----LGYRSEGTLMVGLTTDDLAVARRLWAYQQGLG 121
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
L L S+L EP L A+ D Q+D R S R A
Sbjct: 122 LPVTPLRPSELRDREPALSP-RTRGGAYAGTDHQVD-----------PRRLVSALRTAT- 168
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
+ G + + T + VVAAGC + +L +PV
Sbjct: 169 ----------ERAGGVLVPTPVQRLTEVTAGTTVVAAGCGTAALT-----------GLPV 207
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+P KG +L L + H G+ + L P Q G +
Sbjct: 208 RPVKGQVLRLRAPDGPGFQHVIR--GFADGEQVYLVPRQ-----------------DGEV 248
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
V+G++ + +T V + R+ + A + P++ + L + ++ GLRP PD
Sbjct: 249 VVGATSEER-TDTMVTSGAVLRLLRAATDLVPEVAEYELIEALA------GLRPGSPDNA 301
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
P++GP+PG V ATGH G+ L TA+L+AD++ T APF Q
Sbjct: 302 PILGPLPGRPGVLAATGHHRHGIVLTPVTADLIADLIATGTPDPLLAPFTPQ 353
>gi|239636120|ref|ZP_04677134.1| glycine oxidase ThiO [Staphylococcus warneri L37603]
gi|239598391|gb|EEQ80874.1| glycine oxidase ThiO [Staphylococcus warneri L37603]
Length = 371
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 183/407 (44%), Gaps = 71/407 (17%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IARQ L S L +A+VD+ +P A+ G + + T SE++
Sbjct: 3 DVLIIGSGVIGMSIARQ-LSQSHLDIAIVDRDIPGMHASYKAGGMLGAQNEFTTDSELFQ 61
Query: 142 LALRSNKLWKMLADSL-RDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S L+ L+D+L + G+D I ++Q+G + + + +++ L ++ L
Sbjct: 62 LAVASRSLFPELSDALYHETGID----IEFQQSGLIKMASSTKDVERLTQQYDFLRSKDP 117
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA-----MLAVAYIEKGNRHFASKGR 255
E LS L + D A ++P D Q++A L + I++G
Sbjct: 118 SVELLSDDALFNLSNGHIEPTD-LAIYIPKDGQINANHYTKALLQSVIQRGVH------- 169
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
+Y V + +N V T ++ +++KK ++VA G WS L+ D +++
Sbjct: 170 --RYYQTEVQHIHHNNG---YYTVTTHQSDIHAKK-VIVAGGAWSTQLLKDYAIPRQVI- 222
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
KG +L++E SLKLNH ++ MT +
Sbjct: 223 -----GVKGEVLLVEQ-PSLKLNH--------------------------TVFMTNGCYI 250
Query: 376 I----GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
+ ++G++ +F ++ + I + K A + P+L + K G+
Sbjct: 251 VPKEKHRYLIGATSEFNNYSVGNSEVGISWLLKHAQQRIPELSHSHIL------KQWSGI 304
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLT 478
RPY P++ + +F+ TGH G+ L+ + +A+ +L+
Sbjct: 305 RPYTEHELPIMDQID--DGLFIITGHYRNGILLSPIIGQDIANWLLS 349
>gi|167722400|ref|ZP_02405636.1| oxidoreductase, FAD-binding family protein [Burkholderia
pseudomallei DM98]
Length = 170
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 16/161 (9%)
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+V ++P++P+KGHLL+ + + + +++H +E GY + S++
Sbjct: 21 LVPELPLRPKKGHLLITDRYPA-RVSHQLVELGYAA---------SAHASDGTSVAFNVQ 70
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G L++GSSRQF + VE ++ R+ +RA + P L L + + G R
Sbjct: 71 PRPTGQLLIGSSRQFDTEDPRVEAPVLARMLRRALGYLPALAGL------NGIRAWTGFR 124
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVA 473
PDG P++G P V+LA GHEGLG++ A G+A ++A
Sbjct: 125 AASPDGLPLLGEHPSRRGVWLALGHEGLGVTTAPGSARVLA 165
>gi|329909135|ref|ZP_08274999.1| D-amino acid dehydrogenase small subunit [Oxalobacteraceae
bacterium IMCC9480]
gi|327546542|gb|EGF31521.1| D-amino acid dehydrogenase small subunit [Oxalobacteraceae
bacterium IMCC9480]
Length = 428
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 181/451 (40%), Gaps = 113/451 (25%)
Query: 84 VIIIGAGIIGLTIA--------------RQLLVGSDLSVAVVDKVVPCSGATGAGQG--- 126
++I+G+G++G+T A RQ + S ++ P A A G
Sbjct: 3 IVILGSGVVGITSAWYLARAGHEVTVLDRQPAPAMETSFGNAGQISPGYAAPWAAPGIPL 62
Query: 127 --YIWMVHRTPGSEIWDLALRSNK-------LWKMLA----------------------D 155
WMV E LA+R + +W+ML D
Sbjct: 63 KAMKWMVQ-----EHAPLAIRPDGSLFQLQWMWQMLRNCSASRYAVNKERMVRLSEYSRD 117
Query: 156 SLRD----QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLL 211
LRD G+D +Q G+L + RT ++ + ++ L +AG+ E L+S L
Sbjct: 118 CLRDLRAATGID----YEGRQQGTLQLFRTRQQFDDAAKDMRVLEQAGVPYELLTSDALA 173
Query: 212 QAEPEL------MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVT 265
+AEP L +VG LP D D L + + +F +D
Sbjct: 174 KAEPALAAVSHKLVG----GLRLPNDETGDCQLFTTRLAAMAKDLG-----VQFEYDTPI 224
Query: 266 CLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGH 325
L + TG + V+ T+ + A VVA G +S +L+ L+ D+PV P KG+
Sbjct: 225 DALTLDHTG-ITGVRCGTRTVKAD-AYVVALGSYSRALLKGLV-------DVPVYPLKGY 275
Query: 326 LLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSR 385
+ + D + P + I++T D I +G
Sbjct: 276 SITIPIV------------------DGAMAPTSTILDETYKIAITRFNDRI---RIGGMA 314
Query: 386 QFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPV 445
+ AGF+T + + + +P+ DL F + GLRP PDG P++G
Sbjct: 315 EIAGFDTSLNPKRRATLEMVVNDLFPQGGDLSQGSFWT------GLRPMTPDGTPIVGAS 368
Query: 446 PGLSKVFLATGHEGLGLSLALGTAELVADMV 476
P ++K+FL TGH LG +++ G+A L+AD++
Sbjct: 369 P-INKLFLNTGHGTLGWTMSCGSASLLADLI 398
>gi|375131771|ref|YP_004993871.1| D-amino acid dehydrogenase small subunit [Vibrio furnissii NCTC
11218]
gi|315180945|gb|ADT87859.1| D-amino acid dehydrogenase, small subunit [Vibrio furnissii NCTC
11218]
Length = 420
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++LV +++ ++ L E+G+R E ++ + EP L +D +L
Sbjct: 133 RQQGTLQVFRDEKQLVSIEKDMRLLEESGVRFELMNVDSCIAQEPGLAPVKDKLVGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + + +K F D L + ++ VQT K L
Sbjct: 193 PDDETGDCYLFCQQMTE-----LAKAHGVRFEFDTQIKSLATEGK-KIVGVQTDKG-LLK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S +++ L +DIPV P KG+ L + N
Sbjct: 246 ADAYVVALGSFSTAMLKPL------GIDIPVYPVKGYSLTVPIVNP-------------- 285
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
L P + +++T D I + + + AGF+ + + I +
Sbjct: 286 ----ELSPQSTVMDETYKVALTRFDDRIR---VAGTAELAGFDPSIPTARKETIEMVVRD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ D A F + G RP PDG P+IG +F TGH LG ++A G+
Sbjct: 339 LFPQGGDFDQAQFWT------GFRPMTPDGTPIIGATQ-FDNLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTNPLKVDSA 486
A L+AD++ ++D++
Sbjct: 392 AHLLADIMTRGKAEIDTS 409
>gi|381404332|ref|ZP_09929016.1| D-amino acid dehydrogenase small subunit [Pantoea sp. Sc1]
gi|380737531|gb|EIB98594.1| D-amino acid dehydrogenase small subunit [Pantoea sp. Sc1]
Length = 433
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 133/309 (43%), Gaps = 46/309 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++ + + L +AG+ E L + +L + EP L L
Sbjct: 133 RQGGTLQLFRTQQQFDSASKDIAVLRDAGVPYELLQADELSRVEPALAATRHKLTGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + K A + ++ PV LLR + + V+ + +
Sbjct: 193 PNDETGDCQLFTQRLAK----MAEEAGVVFRFNTPVDHLLRDGN--RIYGVKCG-DEIIK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
+ VVA G +S +L+ + VL IPV P KG+ L + N
Sbjct: 246 ADSYVVAFGSYSTALLKN-------VLSIPVYPLKGYSLTIPIKN--------------- 283
Query: 349 HHDLTLHPGQVNHGQILSISM-TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAA 407
P IL + A T + +G + GFNT++ + + + +
Sbjct: 284 -------PDAAPVSTILDETYKVAVTRFDDRIRVGGMAEIVGFNTKLTEARRETLEMVVS 336
Query: 408 EFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALG 467
+ YP+ L A F + GLRP PDG P++G P +S ++L TGH LG ++A G
Sbjct: 337 DLYPEGGHLAQASFWT------GLRPMTPDGTPIVGATP-ISNLWLNTGHGTLGWTMACG 389
Query: 468 TAELVADMV 476
+ +L+AD++
Sbjct: 390 SGQLLADLI 398
>gi|417644687|ref|ZP_12294663.1| putative glycine oxidase ThiO [Staphylococcus warneri VCU121]
gi|330684612|gb|EGG96319.1| putative glycine oxidase ThiO [Staphylococcus epidermidis VCU121]
Length = 371
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 184/419 (43%), Gaps = 71/419 (16%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IARQ L S L +A+VD+ +P A+ G + + T SE++
Sbjct: 3 DVLIIGSGVIGMSIARQ-LNQSHLDIAIVDRDIPGMHASYKAGGMLGAQNEFTTDSELFQ 61
Query: 142 LALRSNKLWKMLADSL-RDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S L+ L+D+L + G+D I ++Q+G + + + +++ L ++ L
Sbjct: 62 LAVASRSLFPELSDALYHETGID----IEFQQSGLIKMASSTKDVKWLTQQYAFLKSKDP 117
Query: 201 RAEYLSSSDLL-----QAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E LS +L EP + A ++P D Q++A + K +
Sbjct: 118 SVELLSDDELFNLSNGHVEPTDL------AIYIPKDGQINA----NHYTKALLQSIIQRD 167
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
+Y V + +N V T+ +Y+KK ++VA G WS L+ D +++
Sbjct: 168 VHRYYQTEVKHIHHNNG---FYTVTTNNANIYAKK-VIVAGGAWSTQLLKDYAIPRQVI- 222
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
KG +L++E SLKLNH ++ MT +
Sbjct: 223 -----GVKGEVLLVEQ-PSLKLNH--------------------------TVFMTNGCYI 250
Query: 376 I----GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
+ ++G++ +F ++ I + A + P L + + K G+
Sbjct: 251 VPKEKHRYLIGATSEFNNYSVGNSDLGISWLLNHAQQRIPGLSNGHIL------KQWSGI 304
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
RPY P++ + +F+ TGH G+ L+ + +A+ +L+ V + F++
Sbjct: 305 RPYTEHELPIMDQID--DGLFIITGHYRNGILLSPKIGQDIANWLLSGIKPVSYSAFSL 361
>gi|408483880|ref|ZP_11190099.1| putative oxidoreductase [Pseudomonas sp. R81]
Length = 369
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 37/221 (16%)
Query: 273 TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENF 332
G V V T+ ++ + +V+AAG WSG L+ L L +PV+P KG +++ +
Sbjct: 182 AGNVVGVSTADGAIFGDQ-VVLAAGAWSGELLGTL------GLSLPVEPVKGQMILYKCA 234
Query: 333 NSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNT 392
+ +SM +L+ A G++++GS+ + GF+
Sbjct: 235 SDFL---SSM---------------------VLAKGRYAIPRRDGHILIGSTLEHEGFDK 270
Query: 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVF 452
+T ++ + A E P L D A+ + + GLRP P+G P IG VPG ++
Sbjct: 271 TPTETALESLKASAVELIPALAD---AEVVGHWA---GLRPGSPEGIPYIGQVPGFKGLW 324
Query: 453 LATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
L GH GL LA + +L D++L +D AP+A +GR
Sbjct: 325 LNCGHYRNGLVLAPASCQLFTDLLLERAPIIDPAPYAPEGR 365
>gi|262375729|ref|ZP_06068961.1| glycine oxidase ThiO [Acinetobacter lwoffii SH145]
gi|262309332|gb|EEY90463.1| glycine oxidase ThiO [Acinetobacter lwoffii SH145]
Length = 374
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 169/417 (40%), Gaps = 70/417 (16%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSE 138
+ I+GAGI GL A +LL SV + D+ A+ AG G Y W R P +
Sbjct: 3 IAIVGAGITGLMSALELL-EQGCSVTLFDQQAAGQAASWAGGGILSPMYPW---RYPAA- 57
Query: 139 IWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQLC 196
+ LA + +++ +Q L P I ++ +TG L+ + E+ + + Q
Sbjct: 58 VNALARHAKPMYQNW-----NQKLQPFTGIDFQIHETGMLIFDESDFEIGLSYAKTHQ-- 110
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQL-DAMLAVAYIEKGNRHFASKGR 255
+ +AE L + L Q P + + +A + P + + + L + I H+ +
Sbjct: 111 DPQQQAELLDQAKLQQINPRINQSKFKQAIYFPELANIRNPRLLQSII-----HYLKQHP 165
Query: 256 YAEFYHDPVTCLLRSN-STGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
+ D + R N G V+++ + ++ V G WS ++
Sbjct: 166 RVTWQED--CKITRLNIQQGCVKSISDEHSQVFQADQYVFTTGAWSQHW------SQQLG 217
Query: 315 LDIPVKPRKGHLLVL---ENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTA 371
L+IPV+P +G +L+ EN+ H M L P Q H
Sbjct: 218 LEIPVQPVQGQMLLFKTPENWLPTMCMHKVM----------YLIPRQDGH---------- 257
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
++ GSS + GF+T I I + E P+L D L K GL
Sbjct: 258 -------VLCGSSMRQVGFDTSPSSEIRQDILQACIEMVPELADFPLV------KQWAGL 304
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
RP PDG P IG +P L + GH GL + + +L+A ++L VD AP+
Sbjct: 305 RPSSPDGIPYIGKIPKLHNAWANFGHFRNGLCMGPASGKLLAQLILKQMPIVDPAPY 361
>gi|421746930|ref|ZP_16184688.1| D-amino acid dehydrogenase small subunit [Cupriavidus necator
HPC(L)]
gi|409774508|gb|EKN56121.1| D-amino acid dehydrogenase small subunit [Cupriavidus necator
HPC(L)]
Length = 430
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 173/439 (39%), Gaps = 89/439 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDK-VVPCSGATGAGQGYI-------WMVHRTP 135
V+++G+G+IG+T A L + V V+D+ P G + A G I W P
Sbjct: 3 VLVLGSGVIGVTSA-WYLARAGHQVTVIDREAAPALGTSFANAGQISPGYASPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKML------------------ADSLRD--QG 161
I W L++R + +W+ML A+ RD +
Sbjct: 62 LKAIKWMFQQHAPLSIRPDGTLFQLQWMWQMLMNCSADRYAVNKERMVRLAEYSRDCIRA 121
Query: 162 LDPLQVIGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV 219
L I + +Q G+L + RT E+L + + L EAG+ + LS DL +EP L
Sbjct: 122 LRAETGIAYEGRQQGTLQVFRTDEQLEGAAKDIAVLEEAGVPYQLLSREDLAASEPALAA 181
Query: 220 GEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
LP D D L + ++G +F ++ L + T
Sbjct: 182 VSHKLTGGLRLPNDETGDCQLFTQRLAA-----MAEGLGVQFLYNRSIDSLMTQGTAVTG 236
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
A+ + A+VVA G WS + D +R IPV P KG +
Sbjct: 237 AIVGGEPIF--ADAVVVALGSWSTPFIKDFVR-------IPVYPLKGFSIT--------- 278
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
V D P + +++T D + +G Q G++ ++
Sbjct: 279 ---------VPMTDAARSPVSTVLDETYKVAITRFDD---RIRVGGMAQIVGYDRSLDPA 326
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+ + +P D+ A F + GLRP PDG P++GP P ++L TGH
Sbjct: 327 KRRTLEHVVTDLFPGAGDVARASFWT------GLRPMTPDGTPIVGPTP-FKGLWLNTGH 379
Query: 458 EGLGLSLALGTAELVADMV 476
LG ++A G+ +L+AD+V
Sbjct: 380 GTLGWTMACGSGKLLADLV 398
>gi|153838544|ref|ZP_01991211.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
AQ3810]
gi|153839134|ref|ZP_01991801.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
AQ3810]
gi|149747346|gb|EDM58320.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
AQ3810]
gi|149748059|gb|EDM58918.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
AQ3810]
Length = 418
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 43/315 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++L +++ +K L ++G R E + L+ EP L + +D +L
Sbjct: 133 RQFGTLQVFRTTQQLTAIEKDLKLLEQSGTRFELMDVEQCLRQEPGLALVKDKIVGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D + + + ++ + VT ++ VQT+ L+
Sbjct: 193 PDDETGDCFQFCQQLTELAKAHGVTFKFNTEVSNWVTV------GKKIIGVQTNHG-LFK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
VVA+G +S +L+ L +DIPV P KG+ L L N
Sbjct: 246 ADQFVVASGSFSTALLKQL------DIDIPVYPVKGYSLTLPIENE-------------- 285
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
P + ++MT D I + + + AGF+ + Q + I +
Sbjct: 286 ----EYAPRSTVMDETYKVAMTRFDDRIR---VAGTAELAGFDPSLPQKRKNTIEMVVRD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ D A F + G RP PDG P+IG P +F TGH LG ++A G+
Sbjct: 339 LFPRGGDFSQAKFWT------GFRPMTPDGTPIIGATP-YDNLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTNPLKV 483
L+A+++ K+
Sbjct: 392 GHLLANIMTGEKAKI 406
>gi|256395132|ref|YP_003116696.1| glycine oxidase ThiO [Catenulispora acidiphila DSM 44928]
gi|256361358|gb|ACU74855.1| glycine oxidase ThiO [Catenulispora acidiphila DSM 44928]
Length = 388
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 168/398 (42%), Gaps = 65/398 (16%)
Query: 106 LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IWDLALRSNKLWKMLADSLRD--QG 161
LSV + D P S A+ A G + V E + L L S K + + LR+ G
Sbjct: 33 LSVTICDPA-PGSNASFAAAGMLTPVTELHYGEETLLSLNLASAKRYPSFIEELREASDG 91
Query: 162 LDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGE 221
LDP G+++ G+L++ ++ +L E GL+AE+L+ + + EP L G
Sbjct: 92 LDP----GYREAGTLVVAFDADDREVLSELHVFQQSLGLKAEWLTGREARRLEPMLAPG- 146
Query: 222 DSRAAFL-PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNS-----TGE 275
R L D Q+D NR +A DP ++RS TG+
Sbjct: 147 -VRGGLLVSGDHQVD-----------NR-MLLAALFAALERDPKVTIVRSKVAELTVTGD 193
Query: 276 -VEAVQTSKNTLYSKKAIVVAAGCWSGSLM---HDLLRETEIVLDIPVKPRKGHLLVLEN 331
V T +V++AGCWSG + +LL PV+P KG +L L
Sbjct: 194 RATGVVLEDGTALPAAQVVLSAGCWSGQIAGIPEELLP--------PVRPIKGQILRLAI 245
Query: 332 FNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFN 391
+ K S YV + NH ++ + G LVLG++ + ++
Sbjct: 246 PDVFK-PFLSRTVRYVVRN---------NHAYLVPRAH-------GELVLGATVEEQDYD 288
Query: 392 TEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKV 451
T V + + + A E P + +L L + R LRP PD P+IGP L +
Sbjct: 289 TAVTAGGVYELLRDARELVPGITELPLIE------TRAALRPGTPDNAPLIGPT-ALPGL 341
Query: 452 FLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
ATGH G+ L TA+ VA+++ T + APF+
Sbjct: 342 LYATGHYRHGVLLTPATADGVAEILATGTVPEALAPFS 379
>gi|421615941|ref|ZP_16056960.1| FAD-binding oxidoreductase [Pseudomonas stutzeri KOS6]
gi|409782123|gb|EKN61690.1| FAD-binding oxidoreductase [Pseudomonas stutzeri KOS6]
Length = 365
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
PV LR + VQT++ + + + +V+AAG WSG L+ L LD+PVKP
Sbjct: 172 PVQGFLRDGV--RIVGVQTAQGEMLADQ-VVLAAGAWSGKLLATL------GLDMPVKPM 222
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KG +++ F + SM +L+ A G++++G
Sbjct: 223 KGQMIL---FKCAEAFLPSM---------------------VLAKRRYAIPRRDGHILIG 258
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
S+ + GF+ + ++ + A E P L A + + GLRP PDG P I
Sbjct: 259 STLEDVGFDKTPTEDALESLRATAIELLPALAG---AQVVRHWA---GLRPGSPDGVPYI 312
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GPV G ++L GH GL LA + +L+ D++L VD AP+A GR
Sbjct: 313 GPVSGFEGLWLNCGHFRNGLVLAPASCQLLTDLMLGREPVVDPAPYAPAGR 363
>gi|254506807|ref|ZP_05118947.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
16]
gi|219550388|gb|EED27373.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
16]
Length = 415
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 142/320 (44%), Gaps = 48/320 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL--MVGEDSRAAFL 228
++ G+L I R+ +L +++ + L E+G R + + S L EP L M G +L
Sbjct: 133 RRQGTLQIFRSAAQLKAVEKDIALLEESGTRYQLMDSHQCLAQEPGLTHMRGNLVGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L ++K A + Y+ + L++ +S E++AV+T + +
Sbjct: 193 PDDETGDCYLFCQQLQK----MAQQAGVTFLYNTDIDSLIQQDS--EIKAVKTRHVEITA 246
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
+ VVA G +S L+ + +D+P+ P KG+ L L + L +++
Sbjct: 247 DR-FVVALGSYSKHLLES------VGVDLPIYPVKGYSLTLPVIDELSAPQSTI------ 293
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D T Q + ++ TA + AGF+ + + + +
Sbjct: 294 -MDETYKVAVTRFEQRIRVAGTA--------------ELAGFDPALPDKRLATLNHVVSN 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ DL A++ + G RP PDG P+IG P + ++ TGH LG ++A G+
Sbjct: 339 LFPQGTDLAKAEYWT------GFRPMTPDGTPIIGQTP-IRNLYTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTNPLKVDSAPF 488
AE +LT + D+A +
Sbjct: 392 AE-----ILTQIMTGDAAQY 406
>gi|386019566|ref|YP_005937590.1| oxidoreductase, FAD-binding protein [Pseudomonas stutzeri DSM 4166]
gi|327479538|gb|AEA82848.1| oxidoreductase, FAD-binding protein [Pseudomonas stutzeri DSM 4166]
Length = 338
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H PV L+ S V V+T++ + +++ +VVAAG WS L+ L L IPVK
Sbjct: 143 HCPVESFLQDGS--RVVGVRTAQGDMRAEQ-VVVAAGAWSAQLLATL------GLQIPVK 193
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P KG +++ F + SM +L+ A G+++
Sbjct: 194 PMKGQMIL---FKCAEDFLPSM---------------------VLAKRRYAIPRRDGHIL 229
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GS+ + GF+ + ++ + A E P L D + K GLRP PDG P
Sbjct: 230 VGSTLEDVGFDKTPTEDALESLRATAIELLPALADAQVV------KHWAGLRPGSPDGVP 283
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
IG V G ++L GH GL LA + +L+AD++L VD AP+A GR
Sbjct: 284 YIGQVSGFDGLWLNCGHFRNGLVLAPASCQLLADLMLGREPIVDPAPYAPTGR 336
>gi|209525607|ref|ZP_03274145.1| glycine oxidase ThiO [Arthrospira maxima CS-328]
gi|376005473|ref|ZP_09782976.1| Glycine oxidase ThiO [Arthrospira sp. PCC 8005]
gi|423065207|ref|ZP_17053997.1| glycine oxidase ThiO [Arthrospira platensis C1]
gi|209493940|gb|EDZ94257.1| glycine oxidase ThiO [Arthrospira maxima CS-328]
gi|375326187|emb|CCE18729.1| Glycine oxidase ThiO [Arthrospira sp. PCC 8005]
gi|406713339|gb|EKD08510.1| glycine oxidase ThiO [Arthrospira platensis C1]
Length = 367
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 161/387 (41%), Gaps = 75/387 (19%)
Query: 106 LSVAVVDK-----VVPCSGATGAGQGYIW------MVHRTPGSEIWDLALRSNKLWKMLA 154
LSVA+ + V CS T GY+ R P S + DLALRS L++
Sbjct: 21 LSVAIALQWRGATVTVCSRNTQEAAGYVAAGMLAPQAERIPPSPLLDLALRSRSLYQPWT 80
Query: 155 DSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQA 213
++D GLD G+ G L P + ++ Q E+ A +L + L+
Sbjct: 81 RQIQDLTGLD----TGYWPCGIL----APVYQYPHQTQLPQTPES--PAIWLEADQLITQ 130
Query: 214 EPELMVGEDSRAAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNS 272
+P L E + P D Q+D L + + ++ + R D V + +
Sbjct: 131 QPGL-TSEVVGGWWFPQDGQVDNRRLLMRSLIHASQQLGIQIR------DGVEVQEIATT 183
Query: 273 TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLE-- 330
T +++ + T++ + + I+ AAG WSG +L IPV P KG +L L
Sbjct: 184 TNKIKQINTNQGAIVASHYIL-AAGAWSGQ-----------ILPIPVYPIKGQMLSLRVP 231
Query: 331 -NFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAG 389
+ + L L +G I + D G +VLG++ + G
Sbjct: 232 SDISQLPLKQVLFGSG---------------------IYIVPRRD--GLIVLGATAENVG 268
Query: 390 FNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLS 449
F+ + I+ + A YP L + + +F S G RP PD P++G P
Sbjct: 269 FHKSLTPKGINTLLSEATRLYPGLAEFPIEEFWS------GFRPTTPDELPILGRSP-FE 321
Query: 450 KVFLATGHEGLGLSLALGTAELVADMV 476
+ LATGH G+ LA TAEL+AD+V
Sbjct: 322 NLTLATGHHRNGILLAPITAELIADLV 348
>gi|126640955|ref|YP_001083939.1| D-amino acid oxidase [Acinetobacter baumannii ATCC 17978]
Length = 323
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 136/333 (40%), Gaps = 46/333 (13%)
Query: 159 DQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPE 216
+Q L P+ I ++ TG L+ E+ + +Q E R EYL L Q P
Sbjct: 25 NQKLYPVTGIDFEIHDTGMLIFDE--EDFDIGLSYAEQHQEPMQRCEYLQRDALEQVNPH 82
Query: 217 LMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
+ E + A Y +L + ++ + F H PV L++ +
Sbjct: 83 --ISEQFQEAI--YFPELSNIRNPRVLQSLISYLKQHPNVEFFEHTPVKKLIQQGDV--I 136
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
+A+QT ++ V+ +G WS +++ LDIPV+P +G +L+ +
Sbjct: 137 QALQTEDGRKHTADHFVITSGAWSHYW------NSQLQLDIPVEPVQGQMLLFKT----- 185
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
P ++ M + G++V GSS GF+T ++
Sbjct: 186 -------------------PAHWLPTMCMNRVMYLIPRMDGHIVCGSSMAHRGFDTSTDE 226
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
T I + E P+L D + + GLRP P+G P IG +P + ++ G
Sbjct: 227 TTQHNILEACLEMVPELADFPIVHRWA------GLRPSSPNGVPYIGKMPEMDNLWANFG 280
Query: 457 HEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
H GL + G+A+L+ ++L P VD+ ++
Sbjct: 281 HFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYS 313
>gi|421503405|ref|ZP_15950354.1| glycine oxidase ThiO [Pseudomonas mendocina DLHK]
gi|400345878|gb|EJO94239.1| glycine oxidase ThiO [Pseudomonas mendocina DLHK]
Length = 330
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 39/233 (16%)
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H PVT ++ + G++ V TS + +++ +V+AAG WSG ++ L L++PV+
Sbjct: 135 HCPVTGFIQED--GQIRGVITSDGEVRAER-VVLAAGAWSGEMLRTL------GLELPVE 185
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P KG +++ + + +L+ A G+++
Sbjct: 186 PVKGQMILYKCAEDFLPS------------------------MVLARGRYAIPRRDGHIL 221
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GS+ ++AGF+ ++ + A E P L+D A+ + + GLRP P G P
Sbjct: 222 IGSTLEYAGFDKTPTDGALESLKASAEELLPALKD---AEVVGHWA---GLRPGSPQGIP 275
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
IG VP ++L GH GL LA + L+ D++L +D AP+A GR
Sbjct: 276 FIGEVPSHPGLWLNCGHFRNGLVLAPASCRLLTDLLLGREPIIDPAPYAPAGR 328
>gi|407007691|gb|EKE23284.1| hypothetical protein ACD_6C00542G0003 [uncultured bacterium]
Length = 374
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 165/414 (39%), Gaps = 64/414 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLA 143
+ I+GAGI GL A +LL SV + D+ A+ AG G + ++ W
Sbjct: 3 IAIVGAGITGLMSALELL-EQGCSVTLFDQQAAGQAASWAGGGILSPMYP------WRYP 55
Query: 144 LRSNKLWKMLADSLRD--QGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQLCEAG 199
N L + +D Q L P I ++ +TG L+ + E+ + + Q +
Sbjct: 56 AAVNALARHAKPMYQDWNQKLQPFTGIDFQIHETGMLIFDESDFEIGLSYAKTHQ--DPQ 113
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQL-DAMLAVAYIEKGNRHFASKGRYAE 258
+AE L + L Q P + + +A + P + + + L + I H+ +
Sbjct: 114 QQAELLDQAKLQQINPRINQSKFKQAIYFPELANIRNPRLLQSII-----HYLKQHPRVT 168
Query: 259 FYHDPVTCLLRSN-STGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
+ D + R N G V+++ + ++ V G WS ++ L+I
Sbjct: 169 WQED--CKITRLNIQQGCVKSISDEHSQVFQADQYVFTTGAWSQHW------SQQLGLEI 220
Query: 318 PVKPRKGHLLVL---ENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
PV+P +G +L+ EN+ H M L P Q H
Sbjct: 221 PVQPVQGQMLLFKTPENWLPTMCMHKVM----------YLIPRQDGH------------- 257
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
++ GSS + GF+T I I + E P+L D L K GLRP
Sbjct: 258 ----VLCGSSMRQVGFDTSPSSEIRQDILQACIEMVPELADFPLV------KQWAGLRPS 307
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PDG P IG +P L + GH GL + + +L+A ++L VD AP+
Sbjct: 308 SPDGIPYIGKIPKLHNAWANFGHFRNGLCMGPASGKLLAQLILKQMPIVDPAPY 361
>gi|167031674|ref|YP_001666905.1| FAD dependent oxidoreductase [Pseudomonas putida GB-1]
gi|166858162|gb|ABY96569.1| FAD dependent oxidoreductase [Pseudomonas putida GB-1]
Length = 365
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 37/220 (16%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
G V VQT+ L + +V++AG WSG DLLR + L++PV+P KG +++ + +
Sbjct: 181 GRVTGVQTADGVLVADD-VVLSAGAWSG----DLLRT--LGLELPVEPVKGQMILFKCAD 233
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
SM +L+ A G++++GS+ + AG++
Sbjct: 234 DFL---PSM---------------------VLAKGRYAIPRRDGHILVGSTLEHAGYDKT 269
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+D + A E P+L + + GLRP P+G P IGPVPG + ++L
Sbjct: 270 PSGDALDSLKASAVELLPELEGATVVAHWA------GLRPGSPEGIPYIGPVPGHAGLWL 323
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L D++ +D AP+A +GR
Sbjct: 324 NCGHYRNGLVLAPASCQLFTDLLTGAEPIIDPAPYAPEGR 363
>gi|271964288|ref|YP_003338484.1| glycine oxidase ThiO [Streptosporangium roseum DSM 43021]
gi|270507463|gb|ACZ85741.1| glycine oxidase ThiO [Streptosporangium roseum DSM 43021]
Length = 372
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 177/404 (43%), Gaps = 65/404 (16%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE 138
H FDV++IG G+ GL++A + L+VAVVD + A + T E
Sbjct: 2 AHRFDVLVIGGGVAGLSVAWR-TARRGLTVAVVDPAPASGASHAAAGMLAPVSEVTYTEE 60
Query: 139 -IWDLALRSNKLWKMLADSLR-DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+ L L S W A L D G D + ++ G+L + ++L +L + +
Sbjct: 61 PLLRLGLASLARWPAFAAELTADSGHD----LDYRTDGTLDVAFGADDLAVLDDLAAFVD 116
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLP-YDSQLD------AMLAVAYIEKGNRH 249
+ GL AE L+ + + EP M+ R L D+ +D A+LA A +G
Sbjct: 117 KLGLPAERLTGRECRRLEP--MLAPSVRGGLLAGADAWVDPRRVTRALLA-ALERRGGAQ 173
Query: 250 FASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLR 309
++ VT L + G V V+ + +++AAG WSG+L
Sbjct: 174 VRAR----------VTGL--ETAAGAVTGVRLAGGGTVGAARVILAAGAWSGTLEG---L 218
Query: 310 ETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM 369
E++ PV+P KG ++ L + + + + G H + G
Sbjct: 219 PPEVL--PPVRPVKGQIMRLR--SPVPVLQRCVRGVVHGSHVYLVPRGD----------- 263
Query: 370 TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI 429
G LV+G++++ GF+T V + + + A E P + +L LAD ++
Sbjct: 264 -------GELVVGATQEEMGFDTRVTAGGLWELLRDARELVPGVTELELADVVA------ 310
Query: 430 GLRPYMPDGKPVIGP--VPGLSKVFLATGHEGLGLSLALGTAEL 471
GLRP PD P++GP +PGLS LATGH G+ LA TA+L
Sbjct: 311 GLRPGTPDNLPLVGPTALPGLS---LATGHHRGGVLLAPLTADL 351
>gi|218893643|ref|YP_002442512.1| putative D-amino acid oxidase [Pseudomonas aeruginosa LESB58]
gi|218773871|emb|CAW29685.1| probable D-amino acid oxidase [Pseudomonas aeruginosa LESB58]
Length = 364
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V TS+ + K +++AAG WSG L+ L L++PV P KG +++
Sbjct: 183 VVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLELPVVPVKGQMIL------- 228
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + +GF+
Sbjct: 229 ----------YKCAADFLPR-------MVLAKGRYAIPRRDGHILIGSTLEHSGFDKTPT 271
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
++ + AAE P+L D+ + GLRP P+G P IGPVPG ++L T
Sbjct: 272 DEALESLRASAAELLPELADMQPVAHWA------GLRPGSPEGIPYIGPVPGFDGLWLNT 325
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + L+AD++ +D AP+A GR
Sbjct: 326 GHYRNGLVLAPASCRLLADLMSGREAIIDPAPYAPAGR 363
>gi|422022872|ref|ZP_16369378.1| D-amino acid dehydrogenase small subunit [Providencia sneebia DSM
19967]
gi|414094602|gb|EKT56266.1| D-amino acid dehydrogenase small subunit [Providencia sneebia DSM
19967]
Length = 433
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 179/453 (39%), Gaps = 89/453 (19%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQ------GYI--WMVHRTP 135
++++GAG+IG+T A L V V+D+ + T AG GY W P
Sbjct: 3 ILVLGAGVIGVTTA-WYLAQEGHEVTVLDRQYDVAEETSAGNAGQISPGYATPWGAPGIP 61
Query: 136 GSEI-W------DLALRSNK-------LWKMLA----------------------DSLRD 159
+ W LA+R + +W+ML D +R
Sbjct: 62 LKAVKWMFEKHAPLAIRPDGTLFQLRWMWQMLKNCDIQHYAMNKSRMVRIAEYSRDCIRQ 121
Query: 160 QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV 219
D +Q G+L + RT ++ + L + G+ E L++++L +AEP L
Sbjct: 122 LRSDTGIAYEGRQGGTLQLFRTAKQFDSAANDIAILQQEGVPYELLTANELAKAEPALEF 181
Query: 220 GEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
+D LP D D + K + K + + +T +V
Sbjct: 182 VKDKLTGGLRLPNDETGDCQQFTKQLAKMAQDIGVKFLFGQKIEQILT------DGNKVS 235
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
++ N L + + VVA G +S +++ +L++ IPV P KG+ L +
Sbjct: 236 GIRCDGNLLQADR-YVVAMGSYSTAILQNLVK-------IPVYPLKGYSLTMPIM----- 282
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
D P + I++T + I +G + GFN V +
Sbjct: 283 -------------DFQRAPVSTVLDETYKIAVTRFDERI---RVGGMAEVVGFNLNVLKK 326
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+ + + YP D+ A F + GLRP PDG P++GP S ++L TGH
Sbjct: 327 RCETLKMVVEDLYPGGGDITQATFWT------GLRPMTPDGTPIVGPT-AYSNLYLNTGH 379
Query: 458 EGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
LG ++A G+ +L+AD++ N + S +V
Sbjct: 380 GTLGWTMACGSGKLLADLISGNKPDIASDDLSV 412
>gi|409394319|ref|ZP_11245533.1| FAD-binding oxidoreductase [Pseudomonas sp. Chol1]
gi|409121124|gb|EKM97274.1| FAD-binding oxidoreductase [Pseudomonas sp. Chol1]
Length = 355
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 109/231 (47%), Gaps = 39/231 (16%)
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
PVT +R + V V T++ + +++ +VVAAG WSG DLLR + L++PVKP
Sbjct: 158 PVTGFVREGT--RVVGVCTAQGEMRAER-VVVAAGAWSG----DLLRT--LGLELPVKPM 208
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KG +++ F + SM +L+ A G++++G
Sbjct: 209 KGQMIL---FKCAEDFLPSM---------------------VLAKRRYAIPRRDGHILVG 244
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
S+ + GF+ + + + K AAE P L D + K GLRP PDG P I
Sbjct: 245 STLEDVGFDKVPTEDALQSLRKTAAELLPALADAPVV------KHWAGLRPGSPDGVPYI 298
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
G V G ++L GH GL LA + +L+AD++L +D P+A R
Sbjct: 299 GAVDGFDGLWLNCGHFRNGLVLAPASCQLLADLMLDREPIIDPQPYAPGAR 349
>gi|386320331|ref|YP_006016494.1| glycine oxidase [Staphylococcus pseudintermedius ED99]
gi|323465502|gb|ADX77655.1| glycine oxidase, putative [Staphylococcus pseudintermedius ED99]
Length = 368
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 170/400 (42%), Gaps = 62/400 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI----WMVHRTPGSEI 139
+IIGAG++GL+IARQ L + ++D+ P A+ A G + TP +
Sbjct: 4 TLIIGAGVMGLSIARQ-LNSKHRHIRIIDRSTPRMNASYAAGGMLGAQNEFFEDTP---L 59
Query: 140 WDLALRSNKLWKMLADSL-RDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA 198
+ LA++S + LA +L R+ G+ I ++Q G + + P+++ ++++ + L
Sbjct: 60 YRLAMKSRAMMPELAQALERETGIH----IEYQQHGLIKVASQPQDVQAVRQQYEFLHHH 115
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
LS+ L Q P L AAF + D Q++A L Y + +
Sbjct: 116 DHTVTQLSTEQLTQRFPHL--DPSQSAAFKIQDDGQINANL---YTQALIASVMQRSHIE 170
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
H V L R + VE TSK T + +++AAG WSG+L+ L ++
Sbjct: 171 LMTHTEVYSLQRLHYCYRVE---TSKGT-FEADELIIAAGAWSGALLQQL------GFEL 220
Query: 318 PVKPRKGHL-LVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
P P KG + L+ ++ LK +M Y+ +
Sbjct: 221 PTHPVKGDVKLIASDYAGLKETIFNMNGCYI------------------------VPKLP 256
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
++G++ + ++TE + + + P LR + K G+RP
Sbjct: 257 NRFLIGATSDYDCWDTENNDDNLAWLDHESVNMIPALRSHHVI------KTWTGIRPITE 310
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
D P++G + ++F+ TGH G+ L+ +L+A +V
Sbjct: 311 DEIPIMGEIA--PQLFVTTGHYRNGILLSPIAGQLMAQLV 348
>gi|421848361|ref|ZP_16281349.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
NBRC 101655]
gi|421852342|ref|ZP_16285031.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371460722|dbj|GAB26552.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
NBRC 101655]
gi|371479422|dbj|GAB30234.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 424
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 192/448 (42%), Gaps = 91/448 (20%)
Query: 77 SRCHTFDVIIIGAGIIGLT--------------IARQLLVGSDLSVAVVDKVVPCSGATG 122
S+ T VII+GAG+IG+T I RQ + S A +V P
Sbjct: 2 SKDKTVQVIILGAGVIGVTSAWYLASLGHEVTVIDRQPAPALETSFANAGQVSPGYSTPW 61
Query: 123 AG-----QGYIWMVHRTPGSEI----WDLALRS--NKLWK---------------MLADS 156
A Q WM+H + +DLA+ +L K +A+
Sbjct: 62 ASPGLPLQAAKWMLHPKTSPLVIRKRFDLAMLRWMEQLLKNCNAHAYDINKSRMLRIAEY 121
Query: 157 LRDQGLDPLQV---IGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLL 211
RD LD L+ I + +Q G + + RT +++ + ++ L EA + + L+ +L
Sbjct: 122 SRD-CLDALRAETGITYDDRQRGLIQLFRTNKQIDTAQHDMRLLAEANIPHQLLAVDQVL 180
Query: 212 QAEPELMVGED--SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLR 269
+ EP L + + +LP D DA + + ++ R +KG +F +D T L
Sbjct: 181 EHEPGLAHAKHLLTGGLYLPNDESGDAHI---FTQRLARMAEAKG--VKFVYD-TTILGL 234
Query: 270 SNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVL 329
+ E+ +V+TS + A +VA G +S L+ L + +PV P KG+ L L
Sbjct: 235 DAAADEIMSVRTSAGH-FRGDAYIVAMGSYSPLLLRPLR------VHLPVYPVKGYSLTL 287
Query: 330 ENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV-LGSSRQFA 388
D T P + +++T +GN + +G + +
Sbjct: 288 PLT------------------DETHAPTSTVNDTSYKLAITR----LGNRIRVGGTAELT 325
Query: 389 GFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGL 448
G++ ++ + + +E + DL A + + GLRP PDG PVIGPVP
Sbjct: 326 GYSQKLSPDRRETLELSFSELFGG-GDLTAATYWT------GLRPCTPDGTPVIGPVPAF 378
Query: 449 SKVFLATGHEGLGLSLALGTAELVADMV 476
+ ++L TGH LG ++A G+ L+AD+V
Sbjct: 379 TNLWLNTGHGTLGWTMACGSGRLIADLV 406
>gi|422419531|ref|ZP_16496486.1| oxidoreductase, DadA family protein [Listeria seeligeri FSL N1-067]
gi|313632649|gb|EFR99630.1| oxidoreductase, DadA family protein [Listeria seeligeri FSL N1-067]
Length = 368
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 177/412 (42%), Gaps = 78/412 (18%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI--WMVHRTPGSEIW- 140
++IIGAGI+G + A LL ++ V ++D P A+ A G I W+ R ++ W
Sbjct: 4 IVIIGAGIVGAS-AAYLLSKENVEVTLIDSSEPGQ-ASRAAAGIICPWLSKRR--NKYWY 59
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVML----KERVKQLC 196
+LA S ++ +A LR+ D + G+KQ G L + +T E+L L KER +
Sbjct: 60 ELAKNSAAFYEEIAQMLRE---DTGKETGYKQVGVLALRQTEEKLETLFKLAKERRVEAP 116
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDS---RAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
G+ E L+ ++ + P + G S A S L +A E+G + A K
Sbjct: 117 NMGV-IEKLTEAETKEKFPLVKPGFGSIYVSGAARVNGSLFCQTLLMAAKERGVKILAGK 175
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
++ + GEV +N Y K +++A G W S + D +TE+
Sbjct: 176 ATFS--------------AAGEVFIHGKKEN--YDK--LIIATGAWLASFLQDAGYKTEV 217
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
+ +KG LL L+ G VN I ++
Sbjct: 218 L------AQKGQLLELDF-------------------------GSVNTADWPVILPPSSK 246
Query: 374 DVI----GNLVLGSSRQ-FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR 428
++ G +++G++ + AGFN E I + +F + + +A+ V
Sbjct: 247 SIVPFEEGKVIVGATHEKTAGFNIEPTAEGQVEILEEVTKFMEDVSNEKIAN------VT 300
Query: 429 IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNP 480
+G RPY PD P+IG +PG VFLA G GL+ A+L+ ++ L P
Sbjct: 301 VGTRPYTPDFAPLIGSLPGFDSVFLANGLGASGLTTGPYVAKLLVELSLDLP 352
>gi|313107194|ref|ZP_07793393.1| putative D-amino acid oxidase [Pseudomonas aeruginosa 39016]
gi|310879895|gb|EFQ38489.1| putative D-amino acid oxidase [Pseudomonas aeruginosa 39016]
Length = 364
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V TS+ + K +++AAG WSG L+ L L++PV P KG +++
Sbjct: 183 VVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLELPVVPVKGQMIL------- 228
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + +GF+
Sbjct: 229 ----------YKCAADFLPR-------MVLAKGRYAIPRRDGHILIGSTLEHSGFDKTPT 271
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
++ + AAE P+L D+ + GLRP P+G P IGPVPG ++L T
Sbjct: 272 DEALESLRASAAELLPELADMQPVAHWA------GLRPGSPEGIPYIGPVPGFDGLWLNT 325
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + L+AD++ +D AP+A GR
Sbjct: 326 GHYRNGLVLAPASCRLLADLMSGREPIIDPAPYAPAGR 363
>gi|30248661|ref|NP_840731.1| NAD binding site:D-amino acid oxidase [Nitrosomonas europaea ATCC
19718]
gi|30180256|emb|CAD84561.1| NAD binding site:D-amino acid oxidase [Nitrosomonas europaea ATCC
19718]
Length = 368
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 178/417 (42%), Gaps = 71/417 (17%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE-IWD 141
D I+IGAGIIGL+ A +LL SV ++D+ A+ AG G + ++ S+ +
Sbjct: 4 DFIVIGAGIIGLSTALRLL-EEGASVTLLDRREAGCEASWAGGGILSPLYPWNYSDSVTR 62
Query: 142 LALRSNKLWKMLADSLRD-QGLDP-LQVIGWKQTGSLLIGRTPEELVML----KERVKQL 195
LA S + +L G+DP Q+ G LV+L E
Sbjct: 63 LAAYSMSRYPEWTAALNTATGIDPEYQICG---------------LVILPPCDPEAAVNW 107
Query: 196 CEA-GLRAEYLSSSD---LLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFA 251
C A +R YLSSS L A G +++A FLP +Q+ + + K R
Sbjct: 108 CSAHAVRLTYLSSSHHGGLSWAHINDEQG-NAQALFLPEVAQVRNPRLLQALYKRIRQLG 166
Query: 252 SKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET 311
K H V L S +V A++T +S +++AG WS ++
Sbjct: 167 GK----IIEHCEVQELEISGQ--KVHAIRTPSEK-HSADQYILSAGAWSRKIL------G 213
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTA 371
E L++ +KP +G +L L PG +L +
Sbjct: 214 EHALNLAIKPIRGQML------------------------LYRLPGNPLCSIVLQRDLYL 249
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
G+L++GS+ + GF+ ++ +R+ A E P+L++ L S GL
Sbjct: 250 IPRRDGHLLVGSTIEDTGFDKQITLDAKNRLSSWAEEILPQLKNTPLLKHWS------GL 303
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
RP PD P+IGP P L +++ +GH G+++A G+AE++ + +L D P+
Sbjct: 304 RPATPDNIPIIGPHPFLENLYINSGHFRYGVTMAPGSAEILVNEILKRTQPFDVTPY 360
>gi|402298341|ref|ZP_10818041.1| glycine oxidase [Bacillus alcalophilus ATCC 27647]
gi|401726442|gb|EJS99670.1| glycine oxidase [Bacillus alcalophilus ATCC 27647]
Length = 369
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 167/416 (40%), Gaps = 82/416 (19%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEI--- 139
+++++G G+IGL+ A + L V V++K C G + P SEI
Sbjct: 4 EIMVLGGGVIGLSAAFE-LKKRGFHVTVLEK-NKCGGQASGAAAGM----LAPLSEIGED 57
Query: 140 ----WDLALRSNKL---WKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERV 192
+ L+L S +L W+ + D+ + +K++GSL + +L+ L+ R+
Sbjct: 58 PDDFFKLSLESLRLFADWQNEIKKVSDEDFE------YKESGSLHVVYHEADLLALQTRL 111
Query: 193 KQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS 252
+ G+ A LS+ + + EPEL + A + P +S + A V +E R
Sbjct: 112 AWQSQWGVTARLLSAEQVKEKEPELS-DQIIAAMYYPEESHVYAPGYVKALETACRQLG- 169
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTL--------YSKKAIVVAAGCWSGSLM 304
E Y + G+VE ++ + N L + +V+ +G W+ L
Sbjct: 170 ----VEIYEN----------LGQVELIEVNNNVLLKSGQGQQFEGDELVICSGAWAKEL- 214
Query: 305 HDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI 364
E L IP+ P +G + E ++ +GH +
Sbjct: 215 -----EDFFALSIPIYPIRGQICAYE-----------LDQKRIGH-------------IV 245
Query: 365 LSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISN 424
S G LV G+S AGF T+V + I R+ +P L++L
Sbjct: 246 YSSQGYVVPKANGTLVNGASEDIAGFQTDVTEKGIARLTNWNHHIFPFLKEL------KP 299
Query: 425 RKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNP 480
GLRP DG P IG + V A GH G+ L+ TA++V D+V P
Sbjct: 300 FHTWAGLRPATQDGYPFIGQLKQARNVIFAAGHYRNGILLSPITAKIVGDLVGGKP 355
>gi|431800673|ref|YP_007227576.1| FAD dependent oxidoreductase [Pseudomonas putida HB3267]
gi|430791438|gb|AGA71633.1| FAD dependent oxidoreductase [Pseudomonas putida HB3267]
Length = 365
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 37/220 (16%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
G V VQT+ + L + + +V++AG WSG DLLR + L++PV+P KG +++ F
Sbjct: 181 GRVTGVQTADDVLAADE-VVLSAGAWSG----DLLRT--LGLELPVEPVKGQMIL---FK 230
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
+ SM +L+ A G++++GS+ + AG++
Sbjct: 231 CAEDFLPSM---------------------VLAKGRYAIPRRDGHILVGSTLEHAGYDKT 269
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ ++ + A E P+L + + GLRP P+G P IGPVPG + ++L
Sbjct: 270 PTEEALESLKASAVELLPELEGATVVAHWA------GLRPGSPEGIPYIGPVPGHAGLWL 323
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L D++ +D AP+A GR
Sbjct: 324 NCGHYRNGLVLAPASCQLFTDLLTGAEPIIDPAPYAPAGR 363
>gi|242372141|ref|ZP_04817715.1| glycine oxidase [Staphylococcus epidermidis M23864:W1]
gi|242350080|gb|EES41681.1| glycine oxidase [Staphylococcus epidermidis M23864:W1]
Length = 372
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 186/414 (44%), Gaps = 54/414 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IARQ L + VA+VD+ VP A+ G + + T S+++
Sbjct: 3 DVLIIGSGVIGMSIARQ-LSATQYDVAIVDRDVPGKHASYKAGGMLGAQNEFTEESDLFK 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ +L++SL ++ G+D I ++ +G + I + E++ L+ + L +
Sbjct: 62 LAIESRGMFPLLSESLMNETGID----IQFQDSGLIKIAHSKEDVESLRRQYNFLKQNDP 117
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRYAEF 259
+ LS DL+ V A +P+D Q++A A +E N R + +
Sbjct: 118 SVKQLSPEDLMHL-TNGNVKPSYAAIHIPHDGQINANAYTKALLESLNMR-----RISRY 171
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
+H V + R+N +V T + L + I+VA G WS L+ + +++
Sbjct: 172 HHTEVQSIERNNG---YYSVYTDQQPLIEARKIIVAGGAWSSQLLKNYNLHRKVI----- 223
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
KG +L+LEN M G + P Q N
Sbjct: 224 -GVKGEVLLLENDELNLSETLFMTNG------CYIVPKQPN-----------------RF 259
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++G++ +F ++ + ++ ++ A E P+L+ + S G+RPY +
Sbjct: 260 LIGATSEFDNYSVGTTKKGLNWLFNHACERIPELKHSRILKEWS------GVRPYTDNEV 313
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
P++ + +F+ TGH G+ L+ +A+ +++ + F+V R
Sbjct: 314 PMMDQID--DGLFVITGHYRNGILLSPIIGRDIANWLISGIKPPHYSSFSVSRR 365
>gi|421170316|ref|ZP_15628278.1| D-amino acid oxidase [Pseudomonas aeruginosa ATCC 700888]
gi|404523848|gb|EKA34240.1| D-amino acid oxidase [Pseudomonas aeruginosa ATCC 700888]
Length = 364
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V TS+ + K +++AAG WSG L+ L L++PV P KG +++
Sbjct: 183 VVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLELPVVPVKGQMIL------- 228
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + +GF+
Sbjct: 229 ----------YKCAADFLPR-------MVLAKGRYAIPRRDGHILIGSTLEHSGFDKTPT 271
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
++ + AAE P L D+ + GLRP P+G P IGPVPG ++L T
Sbjct: 272 DEALESLRASAAELLPDLADMQPVAHWA------GLRPGSPEGIPYIGPVPGFDGLWLNT 325
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + L+AD++ +D AP+A GR
Sbjct: 326 GHYRNGLVLAPASCRLLADLISGREPIIDPAPYAPAGR 363
>gi|355652368|ref|ZP_09056764.1| D-amino acid oxidase [Pseudomonas sp. 2_1_26]
gi|354824199|gb|EHF08453.1| D-amino acid oxidase [Pseudomonas sp. 2_1_26]
Length = 364
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V TS+ + K +++AAG WSG L+ L L++PV P KG +++
Sbjct: 183 VVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLELPVVPVKGQMIL------- 228
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + +GF+
Sbjct: 229 ----------YKCAADFLPR-------MVLAKGRYAIPRRDGHILIGSTLEHSGFDKTPT 271
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
++ + AAE P+L D+ + GLRP P+G P IGPVPG ++L T
Sbjct: 272 DEALESLRASAAELLPELADMQPVAHWA------GLRPGSPEGIPYIGPVPGFDGLWLNT 325
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + L+AD++ +D AP+A GR
Sbjct: 326 GHYRNGLVLAPASCRLLADLMSGRESIIDPAPYAPAGR 363
>gi|430745921|ref|YP_007205050.1| glycine oxidase ThiO [Singulisphaera acidiphila DSM 18658]
gi|430017641|gb|AGA29355.1| glycine oxidase ThiO [Singulisphaera acidiphila DSM 18658]
Length = 403
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 161/374 (43%), Gaps = 52/374 (13%)
Query: 120 ATGAGQGYIWMVHRTPGSEIWDLALRS--NKLWKMLADSLRDQ-GLDPLQVIGWKQTGSL 176
A+ AG G + P ++ ++L LRS +L+ +D+LR++ G+D G+++TG +
Sbjct: 65 ASWAGAGMLPPCSERPPAQPFEL-LRSWSARLYPKWSDALREETGID----NGFRRTGGV 119
Query: 177 LIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA 236
+ T +E L+ + G+ E L+ D ++ EP L +LP SQ+
Sbjct: 120 DVAWTEDEENALRTSAGRWRSDGIVFERLAPGDYVRVEPALNPSLRV-VYYLPDRSQIRN 178
Query: 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAA 296
+ ++ + R E + + G V AV+T + + ++V A
Sbjct: 179 PWHLEALKTAIEARGVRLRPGE------AVVGFETAGGRVTAVRTEHGRIPCGQ-VIVTA 231
Query: 297 GCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHP 356
G WS L+ L + +P P KG +++L + L
Sbjct: 232 GAWSAGLLEML------GIQVPTPPVKGQIVLL-RCQGMVLRRI---------------- 268
Query: 357 GQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDL 416
V HG++ + G +++G++ + AGF+T + + A P L D
Sbjct: 269 --VEHGRMYLVPRDD-----GRVLIGATEEDAGFDTRPTTQGVRDLLDEAIRLVPALADA 321
Query: 417 CLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
+ + GLRP D +P +G VP + +ATGH+ GL L+ TAE + D+V
Sbjct: 322 EV------ERAWAGLRPGSIDSRPYLGTVPDFPNLLVATGHKRSGLQLSPATAEAITDLV 375
Query: 477 LTNPLKVDSAPFAV 490
L P ++D + F +
Sbjct: 376 LDRPARIDLSLFRI 389
>gi|149907984|ref|ZP_01896652.1| D-amino acid dehydrogenase small subunit [Moritella sp. PE36]
gi|149808990|gb|EDM68921.1| D-amino acid dehydrogenase small subunit [Moritella sp. PE36]
Length = 422
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 140/317 (44%), Gaps = 39/317 (12%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R +L + + +K L ++G E L + + EP L +D L
Sbjct: 133 RQQGTLQVFRHESQLAAIAKDIKILADSGTLYEELDVAACIAVEPGLAGVKDKIVGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D + + + K ++ VT ++S ++++V T+ L +
Sbjct: 193 PDDETGDCYMFCQQLTALAQAAGVKFKF------DVTVNKLNHSDNKIKSVSTNVGEL-T 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA GC+S +L+ +L + + P+ P KG+ L + +S + +++
Sbjct: 246 ADAYVVAMGCYSSALLSPILSPQGLAM--PIYPVKGYSLTVPIVDSSQAPVSTV------ 297
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D T Q + ++ TA + AG+N ++ + D I +
Sbjct: 298 -MDETYKVAMTRFDQRIRVAGTA--------------ELAGYNLDLTASRKDTITMVIND 342
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P D+ A+F + GLRP PDG P+IG P ++ +F GH LG ++A G+
Sbjct: 343 LFPNAGDMSKAEFWT------GLRPMTPDGTPIIGKTP-MANLFTNCGHGTLGWTMACGS 395
Query: 469 AELVADMVLTNPLKVDS 485
A +AD+V +DS
Sbjct: 396 ARYLADVVSGVTPDIDS 412
>gi|116052694|ref|YP_793010.1| glycine/D-amino acid oxidases [Pseudomonas aeruginosa UCBPP-PA14]
gi|421176806|ref|ZP_15634465.1| D-amino acid oxidase [Pseudomonas aeruginosa CI27]
gi|115587915|gb|ABJ13930.1| putative Glycine/D-amino acid oxidases [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404530443|gb|EKA40443.1| D-amino acid oxidase [Pseudomonas aeruginosa CI27]
Length = 364
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V TS+ + K +++AAG WSG L+ L L++PV P KG +++
Sbjct: 183 VVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLELPVVPVKGQMIL------- 228
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + +GF+
Sbjct: 229 ----------YKCAADFLPR-------MVLAKGRYAIPRRDGHILIGSTLEHSGFDKTPT 271
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
++ + AAE P+L D+ + GLRP P+G P IGPVPG ++L T
Sbjct: 272 DEALESLRASAAELLPELADMQPVAHWA------GLRPGSPEGIPYIGPVPGFDGLWLNT 325
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + L+AD++ +D AP+A GR
Sbjct: 326 GHYRNGLVLAPASCRLLADLMSGREPIIDPAPYAPAGR 363
>gi|315501393|ref|YP_004080280.1| glycine oxidase thio [Micromonospora sp. L5]
gi|315408012|gb|ADU06129.1| glycine oxidase ThiO [Micromonospora sp. L5]
Length = 356
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 162/406 (39%), Gaps = 67/406 (16%)
Query: 86 IIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRT--PGSEIWDLA 143
++GAG +GL IA + L V V D P SGA+ G + V E+ L
Sbjct: 3 VVGAGPVGLAIAWRC-AQRGLRVVVHDDR-PGSGASSVAAGMLSPVAEAYFGEHELTALL 60
Query: 144 LRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S W A L + G+D +G++ G+L++G T ++L GL
Sbjct: 61 VGSAARWPGFAAELTEASGVD----LGYRTEGTLVVGLTADDLAEAGRLWSYQRGLGLPI 116
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
L S+L EP L A P D Q+D VA + + R A
Sbjct: 117 TPLRPSELRDREPALAP-RVRGGAVAPGDHQVDPRRLVAALRTAVERAGVELRPA----- 170
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
R + EV+A + VVAAGC + L +PV+P
Sbjct: 171 ------RVGALSEVDA-----------RVTVVAAGCGAAGLT-----------GLPVRPV 202
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KG +L L + GY + L P G +V+G
Sbjct: 203 KGQVLRLRAPGGGPPGFRHVIRGYADSEPVYLVPRDS-----------------GEVVVG 245
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
++ + +TEV + + + AAE P+L + L + ++ GLRP PD P+I
Sbjct: 246 ATVEERA-DTEVTAGGVLTLLRAAAELVPELVEYELVEAVA------GLRPGTPDNAPII 298
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
GP+PG V ATGH G+ L TA+LV ++++T APF
Sbjct: 299 GPLPGRPGVLAATGHHRHGIVLTPVTADLVTELIVTGEPDPALAPF 344
>gi|146305999|ref|YP_001186464.1| glycine oxidase ThiO [Pseudomonas mendocina ymp]
gi|145574200|gb|ABP83732.1| glycine oxidase ThiO [Pseudomonas mendocina ymp]
Length = 361
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 179/420 (42%), Gaps = 79/420 (18%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSE 138
++++G G IGL + LL + +S+ +++ S ++ AG G Y W G+
Sbjct: 1 MVVVGGGAIGL-LTSLLLARAGVSIMLIESSRVGSESSWAGGGIVSPLYPWRY----GAA 55
Query: 139 IWDLALRSNKLWKMLADSL-RDQGLDP-LQVIG--WKQTGSLLIGRTPEELVMLKERVKQ 194
+ LA S + A L D G+DP + V G W L + +
Sbjct: 56 VTALAHWSQDFYPGFARQLWEDTGVDPEVHVTGLYWLD---------------LDDEAEA 100
Query: 195 LCEAGLRAEYLSSSDLLQAEPELMV-GED-SRAAFLPYDSQLDAMLAVAYIEKGNRHFAS 252
L A L D+ ++ V GE +RA +P + + V + A+
Sbjct: 101 LAWAAREGRVLRGIDMASVHEQVPVLGEGFTRAIHMPGVANVRNPRLVKALRAA---LAA 157
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312
H PVT ++ + G++ V TS + +++ +V+AAG WSG ++ L
Sbjct: 158 MPNVELREHCPVTGFIQED--GQIRGVITSDGEVRAER-VVLAAGAWSGEMLRTL----- 209
Query: 313 IVLDIPVKPRKGHLLVL---ENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM 369
L++PV+P KG +++ ENF SM +L+
Sbjct: 210 -GLELPVEPVKGQMILYKCAENFLP------SM---------------------VLARGR 241
Query: 370 TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI 429
A G++++GS+ ++AGF+ ++ + A E P L+D A+ + +
Sbjct: 242 YAIPRRDGHILIGSTLEYAGFDKTPTNGALESLKASAEELLPALKD---AEVVGHWA--- 295
Query: 430 GLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
GLRP P G P IG VP ++L GH GL LA + L+ D++L +D AP+A
Sbjct: 296 GLRPGSPQGIPFIGEVPSHPGLWLNCGHFRNGLVLAPASCRLLTDLLLGREPIIDPAPYA 355
>gi|104783637|ref|YP_610135.1| FAD-binding oxidoreductase [Pseudomonas entomophila L48]
gi|95112624|emb|CAK17352.1| putative oxidoreductase, FAD-binding [Pseudomonas entomophila L48]
Length = 365
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 37/220 (16%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
G V V+T L + + +V++AG WSG L+ L L++PV+P KG +++ F
Sbjct: 181 GRVTGVRTGDGVLAADE-VVLSAGAWSGDLLKTL------GLELPVEPVKGQMIL---FK 230
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
+ SM +L+ A G++++GS+ ++AG++
Sbjct: 231 CAEDFLPSM---------------------VLAKGRYAIPRRDGHILVGSTLEYAGYDKT 269
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ ++ + A E P L D A+ + + GLRP P+G P IG VPG ++L
Sbjct: 270 PTEDALESLKASAIELLPALAD---AEVVGHWA---GLRPGSPEGIPYIGAVPGHEGLWL 323
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L +D++L +D AP+A +GR
Sbjct: 324 NCGHYRNGLVLAPASCQLFSDLLLGREPIIDPAPYAPEGR 363
>gi|224132030|ref|XP_002321238.1| predicted protein [Populus trichocarpa]
gi|222862011|gb|EEE99553.1| predicted protein [Populus trichocarpa]
Length = 62
Score = 80.9 bits (198), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/44 (88%), Positives = 41/44 (93%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGA 123
HTFDV+IIGAGII LTIARQ L+GSDLSVAVVDK VPCSGATGA
Sbjct: 19 HTFDVVIIGAGIIWLTIARQFLIGSDLSVAVVDKDVPCSGATGA 62
>gi|398944102|ref|ZP_10671069.1| glycine oxidase ThiO [Pseudomonas sp. GM41(2012)]
gi|398158511|gb|EJM46855.1| glycine oxidase ThiO [Pseudomonas sp. GM41(2012)]
Length = 366
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 39/230 (16%)
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
V+ +R +T V VQTS ++ + +V+ AG WSG DLL+ + L++PV+P K
Sbjct: 175 VSGFIREGAT--VVGVQTSAGAIHGDQ-VVLTAGAWSG----DLLKSLD--LELPVEPVK 225
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
G +++ Y D +L+ A G++++GS
Sbjct: 226 GQMIL-----------------YKCAADFL-------PSMVLAKGRYAIPRRDGHILIGS 261
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
+ + GF+ ++ ++ + A E P L D A+ + + GLRP P+G P IG
Sbjct: 262 TLEHEGFDKTPTESALESLKASAVELIPALAD---AEVVGHWA---GLRPGSPEGIPYIG 315
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
VPG ++L GH GL LA + +L AD++L +D AP+A GR
Sbjct: 316 RVPGFEGLWLNCGHYRNGLVLAPASCQLFADVMLGREPIIDPAPYAPAGR 365
>gi|428776892|ref|YP_007168679.1| FAD dependent oxidoreductase [Halothece sp. PCC 7418]
gi|428691171|gb|AFZ44465.1| FAD dependent oxidoreductase [Halothece sp. PCC 7418]
Length = 362
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 164/401 (40%), Gaps = 59/401 (14%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIW-MVHRTPGSEIWDL 142
V+IIG GI+G TIA +L SD + ++D+ P +TGA G + ++ + W L
Sbjct: 4 VLIIGGGIVGATIAYELSPSSDFDLTIIDQDAPAQASTGAALGILMGIISQKTKGRAWQL 63
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
S + + L + LR+Q + + G + + + EE+ +E VK + G
Sbjct: 64 RETSLQRYPHLLEELREQTGNAIP----HCQGLIHLCFSSEEMAKWQELVKLRHQQGWTL 119
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
E L A P+L A + P D Q+ + + + + KG ++ +
Sbjct: 120 EVWDLEKLQTACPDLKTTGIIGAVYSPQDLQVQPQVLTQTLIQACQ---KKGVNCDWGVE 176
Query: 263 PV-TCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
+ ++ GE ++T++ T Y +++AAG S L L + E+ +P
Sbjct: 177 ATGVSVSNTDDHGECYTIETNRGT-YEADCLIIAAGLGSFPLTRHLEQPIEL------RP 229
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVL 381
G + + SLKL T D + + L
Sbjct: 230 VLGQAMRVRLPASLKL------------------------------PTVVTGDDVHIVPL 259
Query: 382 GSSRQFAGFNTEVEQ----TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
G+ + G E T +D++W++A +F P L + + S ++ R P+
Sbjct: 260 GNQEYWVGATVEFPDQPVTTPLDKVWEKAVQFCPALATGEILETWSGKRPR-------PE 312
Query: 438 GK--PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
G+ PVI + G V ATGH G+ LA TA V +MV
Sbjct: 313 GQGAPVIQYLEGYQNVIAATGHYRNGVLLAPATARQVKEMV 353
>gi|329115269|ref|ZP_08244024.1| D-amino acid dehydrogenase small subunit [Acetobacter pomorum
DM001]
gi|326695712|gb|EGE47398.1| D-amino acid dehydrogenase small subunit [Acetobacter pomorum
DM001]
Length = 418
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 188/443 (42%), Gaps = 91/443 (20%)
Query: 82 FDVIIIGAGIIGLT--------------IARQLLVGSDLSVAVVDKVVPCSGATGAG--- 124
VII+GAG+IG+T I RQ + S A +V P A
Sbjct: 1 MQVIILGAGVIGVTSAWYLASLGHEVTVIDRQPASALETSFANAGQVSPGYSTPWASPSL 60
Query: 125 --QGYIWMVHRTPGSEI----WDLALRS--NKLWK---------------MLADSLRDQG 161
Q WM+H + +DLA+ +L K +A+ RD
Sbjct: 61 PLQAAKWMLHPKTSPLVIRKRFDLAMLRWMEQLLKNCNAHAYDINKSRMLRIAEYSRD-C 119
Query: 162 LDPLQV---IGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPE 216
LD L+ I + +Q G + + RT +++ + ++ L EA + + L+ +L+ EP
Sbjct: 120 LDALRAETGITYDDRQRGLIQLFRTNKQIDTAQHDMRLLAEANIPHQLLAVDQVLEHEPG 179
Query: 217 LMVGED--SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTG 274
L + + FLP D DA + + ++ R +KG +F ++ T L +
Sbjct: 180 LAHAKHLLTGGLFLPGDESGDAHV---FTQRLARMAEAKG--VKFVYN-TTILGLDAAAD 233
Query: 275 EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNS 334
++ +V+TS + A +VA G +S L+H L + +PV P KG+ L L +
Sbjct: 234 KIMSVRTSAGH-FRADAYIVAMGSYSPLLLHPLR------VHLPVYPVKGYSLTLPLTDE 286
Query: 335 LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV-LGSSRQFAGFNTE 393
HA M VN S +GN + +G + + G++ +
Sbjct: 287 ---THAPMST--------------VN-----DTSYKLAITRLGNRIRVGGTAELTGYSQK 324
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ + + +E + DL A + + GLRP PDG PVIGPVP ++L
Sbjct: 325 LSPDRRETLELSFSELFGG-GDLSAATYWT------GLRPCTPDGTPVIGPVPNFKNLWL 377
Query: 454 ATGHEGLGLSLALGTAELVADMV 476
TGH LG ++A G+ L+AD+V
Sbjct: 378 NTGHGTLGWTMACGSGRLIADLV 400
>gi|345849658|ref|ZP_08802667.1| glycine oxidase [Streptomyces zinciresistens K42]
gi|345638926|gb|EGX60424.1| glycine oxidase [Streptomyces zinciresistens K42]
Length = 389
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 179/421 (42%), Gaps = 56/421 (13%)
Query: 77 SRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG 136
SR T DV+++G GIIGL A + G LS AVVD P GA G + V
Sbjct: 2 SRTRTSDVLVVGGGIIGLVTAWRA-AGRGLSTAVVDPE-PGGGAARVAAGMLAAVTELHH 59
Query: 137 SE--IWDLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
E + L L S + + A L D G D +G+++ G+L + ++ L+E
Sbjct: 60 GEQTLLGLNLASARRYPDFAAELTDLTGHD----LGYRRCGTLAVALDADDRAQLRELHA 115
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDA-MLAVAYIEKGNRHFA 251
+GL +E+LS + + EP L G R + D Q+D LA A + R
Sbjct: 116 LQSRSGLESEWLSGRECRRLEPMLAPG--VRGGLRVDGDHQIDPRRLAAALLVACERTGV 173
Query: 252 SKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLM---HDLL 308
+ R D + G V T + +V+AAG SG L D+L
Sbjct: 174 AFHRTRAERLD--------TAGGRAVGVSTQDGASLRAEQVVLAAGSLSGRLAGVPDDVL 225
Query: 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSIS 368
PV+P KG +L L ++ Y T+ V GQ+ +
Sbjct: 226 --------PPVRPVKGQVLRL-----------TVPRRYAPFLSRTVR-AVVRGGQVYLVP 265
Query: 369 MTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR 428
+ G LV+G++ + G++T V + + + A E P + +L L + R
Sbjct: 266 RES-----GELVVGATSEELGWDTAVTAGGVYELLRDAHELVPGITELPLTE------TR 314
Query: 429 IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
GLRP PD P++GP GL + +ATGH G+ L T +++ ++T L ++ F
Sbjct: 315 AGLRPGSPDNAPLLGPT-GLPGLLVATGHYRNGVLLTPVTGDVLGHALVTGELPQEARAF 373
Query: 489 A 489
+
Sbjct: 374 S 374
>gi|87309373|ref|ZP_01091509.1| probable D-amino acid oxidase [Blastopirellula marina DSM 3645]
gi|87288012|gb|EAQ79910.1| probable D-amino acid oxidase [Blastopirellula marina DSM 3645]
Length = 390
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 180/432 (41%), Gaps = 66/432 (15%)
Query: 76 SSRCH----TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI--W 129
S R H + D +IIG G+IGL++A +L +SV +++K A+ AG G +
Sbjct: 5 SPRTHATSLSADCLIIGGGVIGLSLAYELAT-HGMSVTLLEKAAVGKAASWAGAGLLPPA 63
Query: 130 MVHRT--PGSEIWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELV 186
V + P ++ L+ + + W + LR++ G+D ++ G I R E
Sbjct: 64 TVGQAVEPQEQLRALSHQLHAEWSI---RLREETGVDN----QLERCGGYYIARKAGEAA 116
Query: 187 MLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKG 246
L + Q E G+ E +SS +L + P L +R A+ D I +
Sbjct: 117 ALATTMSQWTEEGIAVERISSDELHRRLPLLASDVLARGAYHVPDEA---------ILRN 167
Query: 247 NRHF-----ASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301
RH A + R F T + + A + + L S +AAG WS
Sbjct: 168 PRHLQALHQACRQRGVVFQE--TTAAIEFQLEQDRVAALVTDHGLLSADQYCIAAGAWSQ 225
Query: 302 SLMHDLLRE---TEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQ 358
L LL + + ++P +G +L+L N ++ L P
Sbjct: 226 RLTDSLLAKVGFSHAAKTPEIEPIRGQMLLL-NGSARFL------------------PTP 266
Query: 359 VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCL 418
+N G + G +++GS+ + AGF+ + I + A P+L+D +
Sbjct: 267 INEGPRYLVPRRD-----GLVLVGSTVEAAGFDCSTTEEIARDLRDFACALVPRLQDAVV 321
Query: 419 ADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLT 478
++ GLRP DG P IG +PG++ ++A GH GL L+ TA L+ ++
Sbjct: 322 ------QQTWAGLRPASIDGIPYIGAMPGVANAYVAAGHYRSGLHLSPATAVLLGRLIRG 375
Query: 479 NPLKVDSAPFAV 490
+ D +PF V
Sbjct: 376 VDVDFDLSPFRV 387
>gi|148545902|ref|YP_001266004.1| FAD dependent oxidoreductase [Pseudomonas putida F1]
gi|148509960|gb|ABQ76820.1| FAD dependent oxidoreductase [Pseudomonas putida F1]
Length = 365
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 37/220 (16%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
G V VQT+ L + + +V++AG WSG DLLR + L++PV+P KG +++ F
Sbjct: 181 GRVTGVQTADGVLAADE-VVLSAGAWSG----DLLRT--LGLELPVEPVKGQMIL---FK 230
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
+ SM +L+ A G++++GS+ + AG++
Sbjct: 231 CAEYFLPSM---------------------VLAKGRYAIPRRDGHILVGSTLEHAGYDKT 269
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
++ + A E P+L + + GLRP P+G P IGPVPG ++L
Sbjct: 270 PTGDALESLKASAVELLPELEGATVVAHWA------GLRPGSPEGIPYIGPVPGHEGLWL 323
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L D++ +D AP+A +GR
Sbjct: 324 NCGHYRNGLVLAPASCQLFTDLLTGAEPIIDPAPYAPEGR 363
>gi|333901997|ref|YP_004475870.1| glycine oxidase ThiO [Pseudomonas fulva 12-X]
gi|333117262|gb|AEF23776.1| glycine oxidase ThiO [Pseudomonas fulva 12-X]
Length = 357
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 39/233 (16%)
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H PV +R + + VQ+++ L +++ +VVAAG WSG L+ L + +PV+
Sbjct: 163 HSPVVQFVREGT--RIAGVQSAEGELLAEQ-VVVAAGAWSGELLQSL------EMSLPVE 213
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P KG +++ F + SM +L+ A G+++
Sbjct: 214 PVKGQMIL---FKCAEDFLPSM---------------------VLAGGRYAIPRRDGHIL 249
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GS+ + AGF+ + + A P LRD A+ + + GLRP P+G P
Sbjct: 250 VGSTLEHAGFDKTPTDQALASLRASAETLLPALRD---AEVVGHWA---GLRPGSPEGIP 303
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
IG VP ++L GH GL LA + L+AD++L +D AP++ GR
Sbjct: 304 FIGEVPEHPGLWLNCGHYRNGLVLAPASCRLLADLMLGREPIIDPAPYSPAGR 356
>gi|408371308|ref|ZP_11169076.1| D-amino acid dehydrogenase [Galbibacter sp. ck-I2-15]
gi|407743269|gb|EKF54848.1| D-amino acid dehydrogenase [Galbibacter sp. ck-I2-15]
Length = 416
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 154/376 (40%), Gaps = 68/376 (18%)
Query: 127 YIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGL--DPLQVIGWKQTGSLLIGRT--- 181
+ W H++ E A+ K +L+ +L + L L W+Q G L++ +T
Sbjct: 89 WAWYFHKSSTQEKVAKAIPVIKDINILSRTLYNDMLASGDLGDFHWEQKGLLMMYKTDKA 148
Query: 182 PEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVA 241
EE + + E K+ GL ++L S L EPE+ + + + DA
Sbjct: 149 AEEELHVAELAKK---QGLEVDHLDSKGLKDLEPEVEIAAKGGIYY-----KCDAHSTPT 200
Query: 242 YI-EKGNRHFASKGRYAEFYHDPVTCLLRSNSTGE--------VEAVQTSKNTLYSKKAI 292
I K + G +L+SN E ++ VQT+K+ Y+ +
Sbjct: 201 QIMPKLISWLKTNG-----------VILKSNEVVERLSMNGDKLKTVQTNKSA-YAADEV 248
Query: 293 VVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDL 352
VVAAG WS L L L++P++ KG+ + +
Sbjct: 249 VVAAGSWSQELAKKLH------LNLPIQAGKGYRIDI----------------------- 279
Query: 353 TLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPK 412
P ++ IL + A T + G + +F+G NT + Q ++ I + A +YP+
Sbjct: 280 -YRPTKIKIPAILIEAKVAMTPMKGFTRFAGTMEFSGINTIIRQQRVEAISQAAKAYYPE 338
Query: 413 LRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELV 472
+ R + GLRP PDG P IG S V AT H +G SL T +LV
Sbjct: 339 IE----IQEQEKRDAKSGLRPVSPDGLPYIGRSLKYSNVTFATAHAMMGWSLGPATGKLV 394
Query: 473 ADMVLTNPLKVDSAPF 488
++++ + L +D A F
Sbjct: 395 SELISDHQLSMDIAAF 410
>gi|330992270|ref|ZP_08316218.1| D-amino acid dehydrogenase small subunit [Gluconacetobacter sp.
SXCC-1]
gi|329760469|gb|EGG76965.1| D-amino acid dehydrogenase small subunit [Gluconacetobacter sp.
SXCC-1]
Length = 418
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 172/441 (39%), Gaps = 92/441 (20%)
Query: 84 VIIIGAGIIGLTIA--------------RQLLVGSDLSVAVVDKVVPCSGATGAGQGY-- 127
+I++G+G++G+T A RQ G + S A +V P + AG G
Sbjct: 3 IIVLGSGVVGVTSAWYLAQAGHEVTVVDRQPEAGLETSFANAGQVSPGYSSPWAGPGVPF 62
Query: 128 ---IWMVHRTPGSEIWDLALRSNKLWKMLA--------------------------DSLR 158
W++ + W + LWK L D +R
Sbjct: 63 KALKWLLMKYRPFVFWPMP--DPHLWKWLVQMLENCNTPAYDRNKGRMVRIAEYSRDVMR 120
Query: 159 DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELM 218
D +Q G+L + RT +++ + ++ L + + E L +D ++AEP L
Sbjct: 121 DLRASTGITYDDRQQGTLQVFRTQKQMDGIAGDIRVLEQYNVPYELLGRADCVKAEPGLG 180
Query: 219 VGEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
V LP D DA L R A +H + G +
Sbjct: 181 VSAHKIVGGLRLPGDETGDAFLFT------QRLAAKAAEAGVTFHYDTRIRTMTAEGGRI 234
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
V+TS+ + + A VV+ G +S +++ L LD+P+ P KG+ L + N +
Sbjct: 235 TGVETSRGRMVAD-AYVVSLGSYSPAMVRSL------GLDLPIYPVKGYSLTADIINEKQ 287
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV-LGSSRQFAGFNTEVE 395
P + I +T +GN V +G + + AGF+T +
Sbjct: 288 A------------------PVSTIMDETFKIGITR----LGNRVRIGGTAELAGFSTSLR 325
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+ + + +P D+ A F + GLRP PDG P+IG +FL T
Sbjct: 326 APRRETLEHSVTDLFPGGGDIAGARFWT------GLRPMTPDGTPIIGRTR-YDNLFLNT 378
Query: 456 GHEGLGLSLALGTAELVADMV 476
GH LG ++A G+ +++AD++
Sbjct: 379 GHGTLGWTMACGSGKVLADIM 399
>gi|307543915|ref|YP_003896394.1| glycine oxidase [Halomonas elongata DSM 2581]
gi|307215939|emb|CBV41209.1| glycine oxidase ThiO [Halomonas elongata DSM 2581]
Length = 349
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 140/338 (41%), Gaps = 54/338 (15%)
Query: 157 LRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPE 216
L + G+DP ++Q G L + E M R E G E +S L EPE
Sbjct: 65 LEETGVDP----EYRQKGLLYLRVDDERDAMAWAR-----EVGKPLERVSGDFLYDKEPE 115
Query: 217 LMVGEDSRAAFLP-YDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGE 275
+ G + A ++P S + LA A + A R H V L G
Sbjct: 116 AVPG-CADALWMPTLGSIRNPRLARAL----HARLADMPRVTLHEHCEVQGL--REQGGR 168
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
+ AV+T++ L+ + +VV G W+ ++ T + +++PV+P KG +++ + L
Sbjct: 169 IVAVETNEGELHGDQ-VVVCGGAWAAEVL------TTVGVELPVRPVKGQMILFKAPPGL 221
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
M+ YV G ++ GS+ + GF+ +
Sbjct: 222 VRRVVLMDGRYV------------------------IPRADGRVLAGSTLEETGFDKSLS 257
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
++ + +W A P L D + + GLRP PDG P IG VPG+ + +
Sbjct: 258 ESARESLWTSATGIVPALADCEVEHHWA------GLRPGSPDGVPFIGAVPGIDNLHVNA 311
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + L+ D +L VD AP+ ++GR
Sbjct: 312 GHFRNGLVLAPASTRLLVDELLGREPIVDPAPYRLKGR 349
>gi|417320633|ref|ZP_12107176.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
10329]
gi|328472582|gb|EGF43445.1| D-amino acid dehydrogenase small subunit [Vibrio parahaemolyticus
10329]
Length = 418
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 133/315 (42%), Gaps = 43/315 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ +K L ++G R E + L+ EP L + +D +L
Sbjct: 133 RQFGTLQVFRKTQQLTAIEKDLKLLEQSGTRFELMGVEQCLRQEPGLALVKDKIVGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D + + + ++ + VT ++ VQT+ L+
Sbjct: 193 PDDETGDCFQFCQQLTELAKAHGVTFKFNTEVSNWVTV------GKKIIGVQTNHG-LFK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
VVA+G +S +L+ L +DIPV P KG+ L L N
Sbjct: 246 ADQFVVASGSFSTALLKQL------DIDIPVYPVKGYSLTLPIENE-------------- 285
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
P + ++MT D I + + + AGF+ + Q + I +
Sbjct: 286 ----EYAPRSTVMDETYKVAMTRFDDRIR---VAGTAELAGFDPSLPQKRKNTIEMVVRD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ D A+F + G RP PDG P+IG P +F TGH LG ++A G+
Sbjct: 339 LFPRGGDFSQAEFWT------GFRPMTPDGTPIIGATP-YDNLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTNPLKV 483
L+A+++ K+
Sbjct: 392 GHLLANIMTGEKAKI 406
>gi|188533686|ref|YP_001907483.1| D-amino acid dehydrogenase small subunit [Erwinia tasmaniensis
Et1/99]
gi|226722381|sp|B2VJ51.1|DADA_ERWT9 RecName: Full=D-amino acid dehydrogenase small subunit
gi|188028728|emb|CAO96590.1| D-amino acid dehydrogenase small subunit [Erwinia tasmaniensis
Et1/99]
Length = 433
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 136/308 (44%), Gaps = 44/308 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGED--SRAAFL 228
+Q G+L + RT ++ + + L EAG+ + L ++ L++AEP L + S L
Sbjct: 133 RQGGTLQLFRTAQQFESAAKDIAVLREAGVPYQLLEAAQLIEAEPALAASQHKLSGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + ++ + G + F + PV LL+ + ++ VQ + +
Sbjct: 193 PNDETGDCQL---FTQRLAEMAMAAGVHFRF-NTPVDALLQDAN--QICGVQCGSERV-T 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S L++ +++ IPV P KG+ L + + +++
Sbjct: 246 ADAYVVALGSFSTELLNHIVK-------IPVYPLKGYSLTIPITDEKAAPLSTV------ 292
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
+ A T + +G + GFNT++ + +
Sbjct: 293 ---------------LDETYKVAITRFDNRIRVGGMAEIVGFNTQLLPARRKTLEMVVRD 337
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
YP D+ A F S GLRP PDG PV+G P L ++L TGH LG ++A G+
Sbjct: 338 LYPHGGDIGRATFWS------GLRPMTPDGTPVVGRTP-LKNLYLNTGHGTLGWTMACGS 390
Query: 469 AELVADMV 476
+L+AD++
Sbjct: 391 GQLLADII 398
>gi|428304777|ref|YP_007141602.1| FAD dependent oxidoreductase [Crinalium epipsammum PCC 9333]
gi|428246312|gb|AFZ12092.1| FAD dependent oxidoreductase [Crinalium epipsammum PCC 9333]
Length = 367
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 175/407 (42%), Gaps = 54/407 (13%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMV--HRTPGSEIWD 141
++IIG G++G IA +L + +LS+ V+D+ P GATGA G + V H+ G+
Sbjct: 4 IVIIGCGVVGAAIAYELSLVPNLSITVIDQQPPAQGATGAALGVLMGVISHKVKGNA--- 60
Query: 142 LALRSNKLWKMLADSL-RDQGLDP-LQVI-GWK----QTGSLLIGRTPEELVMLKERVKQ 194
W+M S+ R + L P L+ I G+K + G L + E+L ++ ++
Sbjct: 61 --------WRMRQSSIQRYESLIPELEAITGYKIPFNRQGILKLCFEGEDLTKWEKLIEI 112
Query: 195 LCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKG 254
G E SS LL P+L + P D QLD + + ++
Sbjct: 113 RQSQGWDLEIWDSSQLLLNCPQLSSNNIIAGVYSPQDRQLDPTALTNALVEAAKYNGVNF 172
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
++ + +C + +QT+ L + VVAAG S L L + +I
Sbjct: 173 QFGVKVDNFKSCKSENLDIDVCREIQTTTGKL-TADWFVVAAGLGSTPLTASLQQAVDI- 230
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
+P G L L N L A+ + G N I+ +S
Sbjct: 231 -----RPVLGQALHLRIKN--PLGDANFQPVITG-----------NDVHIVPLSNE---- 268
Query: 375 VIGNLVLGSSRQFAGFNTEV--EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
+G++ +F+ ++++ + +++++ ++A F P L + + S + R R
Sbjct: 269 ---EYWVGATVEFSSNHSDIVPDAALLEQVMQQAIAFCPDLAEATVLKSWSGLRPRPEAR 325
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN 479
P PVIG +P S V LATGH G+ LA TA+ + + +L++
Sbjct: 326 P-----APVIGHLPSYSNVLLATGHYRNGVLLAPATAQAIREAILSS 367
>gi|149920975|ref|ZP_01909436.1| oxidoreductase, FAD-dependent [Plesiocystis pacifica SIR-1]
gi|149818247|gb|EDM77702.1| oxidoreductase, FAD-dependent [Plesiocystis pacifica SIR-1]
Length = 316
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 145/352 (41%), Gaps = 63/352 (17%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLA 143
+ ++GAGI+G AR L+ G +V V+D P +GA+ G G++ + P + L+
Sbjct: 2 ITVVGAGIVGAACARALVRGG-AAVRVIDARAPGTGASAEGMGHVLALDHDPPT--LALS 58
Query: 144 LRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAE 203
RS +LW LA +L Q W G+L + RTP+EL + + L GLR E
Sbjct: 59 HRSLELWHALAPALP-------QSAEWSGAGTLWLARTPDELERAWDEAEGLRGLGLRVE 111
Query: 204 YLSSSDLLQAEPEL---MVG----EDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRY 256
L + EP L + G D R + P + MLA A E G G
Sbjct: 112 RLDNDAARALEPCLSPTLAGALRVADDRVVYPPVVAAW--MLAQAR-ESGAEVTTGVG-- 166
Query: 257 AEFYHDPVTCLLRS-NSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
+RS + E V +A+V+A G +G+L+ + L
Sbjct: 167 -----------VRSLEPADQGERVVLDDGRALECEAVVLATGLGTGALL-----PADSPL 210
Query: 316 DIPVKPRKGHLLVLENFNS-------LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSIS 368
++PR+GHL++ E + +L H +E GY HD G S++
Sbjct: 211 RAAIRPRRGHLIITERLPTAGALSPLARLRHQLVELGY---HDSVATRGAT------SVA 261
Query: 369 MTATTDVIGNLVLGSSRQ-------FAGFNTEVEQTIIDRIWKRAAEFYPKL 413
G L+LGSSRQ A ++ + R+ RA F P L
Sbjct: 262 FNLQPRSTGQLLLGSSRQDMDPSLPLAALKA-IDADTLGRMVARAQPFVPAL 312
>gi|339485549|ref|YP_004700077.1| FAD dependent oxidoreductase [Pseudomonas putida S16]
gi|338836392|gb|AEJ11197.1| FAD dependent oxidoreductase [Pseudomonas putida S16]
Length = 365
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 37/220 (16%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
G V VQT+ L + + +V++AG WSG DLLR + L++PV+P KG +++ F
Sbjct: 181 GRVTGVQTADGVLAADE-VVLSAGAWSG----DLLRT--LGLELPVEPVKGQMIL---FK 230
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
+ SM +L+ A G++++GS+ + AG++
Sbjct: 231 CAEDFLPSM---------------------VLAKGRYAIPRRDGHILVGSTLEHAGYDKT 269
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ ++ + A E P+L + + GLRP P+G P IGPVPG + ++L
Sbjct: 270 PTEEALESLKASAVELLPELEGATVVAHWA------GLRPGSPEGIPYIGPVPGHAGLWL 323
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L D++ +D AP+A GR
Sbjct: 324 NCGHYRNGLVLAPASCQLFTDLLTGAEPIIDPAPYAPTGR 363
>gi|89093554|ref|ZP_01166502.1| probable D-amino acid oxidase [Neptuniibacter caesariensis]
gi|89082244|gb|EAR61468.1| probable D-amino acid oxidase [Oceanospirillum sp. MED92]
Length = 367
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 173/421 (41%), Gaps = 77/421 (18%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGS 137
DV++IG G+IG+ +AR+L S V +V++ ++ AG G Y W R P
Sbjct: 9 DVLVIGGGVIGMMLAREL-AQSGADVTLVERKACAQESSWAGGGIVSPLYPW---RYP-E 63
Query: 138 EIWDLALRSNKLWKMLADSL-RDQGLDPLQVIGWKQTGSLLIG-RTPEELVMLKERVKQL 195
+ LA S + LA+ L + G DP +Q G L++ ++ + E+ +
Sbjct: 64 PVTRLATWSQSSYVHLAEELIEETGYDP----ELRQKGMLMVAVEDQDDALTWAEKYHRP 119
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
+ SS L Q EP L+ G ++P S + N R
Sbjct: 120 LRK------VDSSFLYQKEPNLVPGL-PEGLWMPEVSSIR-----------NPRLGRSLR 161
Query: 256 YAEFYHDPVTCLLRSNST------GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLR 309
+ + VT L T G V ++TSK + + K +++AAG WS L+ + R
Sbjct: 162 ESLLLNPKVTLLEHHEVTAFNFKGGVVSGIETSKGCVQADK-VIIAAGAWSSELLGLVGR 220
Query: 310 ETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM 369
+ +PV+P G +++ + PG VN +L
Sbjct: 221 K------LPVEPVHGQMMLFKA-----------------------EPGLVNR-VVLKGGR 250
Query: 370 TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI 429
G +++GS+ + GF Q + + + A + PKL D + S
Sbjct: 251 YVIPRNDGRVLVGSTLERIGFEKRTTQEAAESLHQTALDIIPKLADYRVEHHWS------ 304
Query: 430 GLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
GLRP P+G P IG V G +++ G GL LA + L+ D+++ + + P+A
Sbjct: 305 GLRPGSPEGIPYIGKVTGFDNLYVNAGQYRNGLVLAPASTRLLVDLMMQRESIIPAEPYA 364
Query: 490 V 490
+
Sbjct: 365 M 365
>gi|386816538|ref|ZP_10103756.1| glycine oxidase [Thiothrix nivea DSM 5205]
gi|386421114|gb|EIJ34949.1| glycine oxidase [Thiothrix nivea DSM 5205]
Length = 370
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 172/413 (41%), Gaps = 65/413 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGS 137
D II+G G++G+ AR L + L V ++D+ S +T AG G Y W R P +
Sbjct: 3 DAIIVGGGLMGMLTARSLHQ-AGLKVMIIDQGELGSESTWAGGGIVSPLYPW---RYPAA 58
Query: 138 EIWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+ LA + + L ++LR++ G+DP W ++G L T + Q
Sbjct: 59 -VSQLARYGQQRYPALCETLREETGVDPQ----WIRSGLLF---TEDHEYTAAREWAQTW 110
Query: 197 EAGLRAEYLSSSDLLQA-EPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
GL ++L+ S L A EP+L G R FLP Q+ + R
Sbjct: 111 GYGL--QHLTGSAALAACEPQLAEGF-QRGLFLPELGQVRNPRIAHALRTSLRLLPLT-- 165
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
AE Y PVT L +N G V V+ ++ K +++ G W+G L +
Sbjct: 166 IAEHY--PVTGLETAN--GRVTGVRLGDEVFHADK-VILNTGAWTG------LFPQMQAM 214
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+ V+P G +++ L L + AG L P Q
Sbjct: 215 KVDVRPVLGQMILFRGPRGL-LQRIVLSAGRY------LIPRQ----------------- 250
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G ++ GS+ + GF+ + + A P LRDL + + GLRP
Sbjct: 251 DGRILCGSTLEMRGFDKHTTDAARAELQEAACAIMPALRDLPVTNHWC------GLRPGS 304
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P+G P I P ++ +++ GH G+ L L + +L+ D +L N +D AP+
Sbjct: 305 PNGVPYIDEHPDIAGLYVNAGHYRNGVVLGLASVQLLVDRILGNEPYLDPAPY 357
>gi|421874530|ref|ZP_16306133.1| glycine oxidase ThiO [Brevibacillus laterosporus GI-9]
gi|372456386|emb|CCF15682.1| glycine oxidase ThiO [Brevibacillus laterosporus GI-9]
Length = 376
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 176/390 (45%), Gaps = 61/390 (15%)
Query: 94 LTIARQLL-VGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWDLALRSNKLWK 151
L IA +L VG ++V +++K V A+ A G + + T + D+ +RS +L+K
Sbjct: 17 LAIATELAHVG--MTVTLIEKGVFGGEASVAAAGMLAPLKEFTKPGPLLDMGIRSLQLYK 74
Query: 152 MLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDL 210
L++ G+D G L + T E L+ER + G LS ++
Sbjct: 75 NWVLELKEATGID----CQLSTAGILTVAMTDMEEEWLQERYQWQKSEGYDIRLLSGKEV 130
Query: 211 LQAEPEL--MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLL 268
+ EP L MV +A + P+++ ++ L V + +K R+ + T ++
Sbjct: 131 QKQEPHLSKMV---RQAIYSPHEADINNRLLVEALV-----IQAKNRHVRLLQN--TAVI 180
Query: 269 RSNSTG-EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLL 327
R G ++ V T K L + ++VAAG W+ D+LR+ + ++PV P +G +
Sbjct: 181 RLKHAGRKMTGVVTEKGELEANH-VIVAAGAWTA----DILRQVGV--NVPVYPVRGQIA 233
Query: 328 VLENFNSLKLNHASM-EAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQ 386
+++ N L L+H + GY L P Q +++G++
Sbjct: 234 AVDS-NHLPLSHVVFGKNGY-------LVPKQDR-----------------RIIVGATED 268
Query: 387 FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVP 446
AGF+ + ++ A P + + A F+ + GLRP DG P++GPVP
Sbjct: 269 LAGFDRSSTVYGVSKVLTGAMSIVPAISE---APFL---QAWAGLRPATADGHPILGPVP 322
Query: 447 GLSKVFLATGHEGLGLSLALGTAELVADMV 476
S + LA GH G+ LA TA+L+A+ V
Sbjct: 323 NWSGLTLACGHYRNGILLAPITAKLIAEYV 352
>gi|311745536|ref|ZP_07719321.1| putative D-amino acid dehydrogenase small subunit [Algoriphagus sp.
PR1]
gi|126578095|gb|EAZ82315.1| putative D-amino acid dehydrogenase small subunit [Algoriphagus sp.
PR1]
Length = 415
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 143/340 (42%), Gaps = 58/340 (17%)
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
+L+L S L++ ++ P I K+ G +++ ++ E + GL
Sbjct: 110 NLSLLSKALYQEFSEE------HPESSIALKKKGLMMVYQSKAMETEEVEFAHLARKNGL 163
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYI-----EKGNRHFASKGR 255
A+ LS D+ EP L V F P D+ LD +++ EKG + A+
Sbjct: 164 EADILSPEDIKTFEPNLEVKARGAVRF-PGDAHLDPGQLYSFLKSYLQEKGVKFLANTS- 221
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
V ++N G+V++V T + + ++K I++ G WSG L L
Sbjct: 222 --------VHGFEKTN--GQVKSVLTDQGKIEAEK-IILCGGSWSGELAKML------GF 264
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+P+ KG+ + EN ++ IL+ A +
Sbjct: 265 SMPMMGGKGYSFLQEN------------------------KPEIKQASILTEMKVAVSPY 300
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
++ G + + AG N ++ + I++ +YP A F ++ GLRP
Sbjct: 301 GNHIRFGGTMEIAGTNEKININRVKGIYESINRYYPSFE----AKFPEKDQIWKGLRPCS 356
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADM 475
PDG P IG PGL+ V + +GH +G+SLA + ++++++
Sbjct: 357 PDGLPYIGYAPGLTNVLVNSGHSMMGVSLAPASGKIISEL 396
>gi|395447013|ref|YP_006387266.1| FAD dependent oxidoreductase [Pseudomonas putida ND6]
gi|388561010|gb|AFK70151.1| FAD dependent oxidoreductase [Pseudomonas putida ND6]
Length = 365
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 37/220 (16%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
G V VQT+ L + + +V++AG WSG DLLR + L++PV+P KG +++ F
Sbjct: 181 GRVTGVQTADGVLAADE-VVLSAGAWSG----DLLRT--LGLELPVEPVKGQMIL---FK 230
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
+ SM +L+ A G++++GS+ + AG++
Sbjct: 231 CAEDFLPSM---------------------VLAKGRYAIPRRDGHILVGSTLEHAGYDKT 269
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
++ + A E P+L + + GLRP P+G P IGPVPG ++L
Sbjct: 270 PTGDALESLKASAVELLPELEGATVVAHWA------GLRPGSPEGIPYIGPVPGHEGLWL 323
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L D++ +D AP+A +GR
Sbjct: 324 NCGHYRNGLVLAPASCQLFTDLLTGAEPMIDPAPYAPEGR 363
>gi|375264602|ref|YP_005022045.1| D-amino acid dehydrogenase small subunit [Vibrio sp. EJY3]
gi|369839926|gb|AEX21070.1| D-amino acid dehydrogenase small subunit [Vibrio sp. EJY3]
Length = 418
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 136/315 (43%), Gaps = 43/315 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++L +++ +K L ++G R + + ++ EP L + ++ +L
Sbjct: 133 RQFGTLQVFRTEQQLKAIEKDLKLLEQSGTRFQLMDVEQCIKQEPGLALVQEKIVGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D + ++ + G EF + + ++ VQT++ L+
Sbjct: 193 PDDETGDCF---QFCQQLTELAKAHGVRFEFNTEVSNWVTEGK---KITGVQTNRG-LFK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
VVA+G +S +L+ L ++IPV P KG+ L + N
Sbjct: 246 ADQFVVASGSYSTALLKQL------DVNIPVYPVKGYSLTVPIENE-------------- 285
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
P + ++MT D I + + + AGF+ + Q + I +
Sbjct: 286 ----QYAPRSTVMDETYKVAMTRFDDRIR---VAGTAELAGFDGSIPQKRKNTIEMVIRD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ D A+F + G RP PDG P+IG P +F TGH LG ++A G+
Sbjct: 339 LFPRSGDFSQAEFWT------GFRPMTPDGTPIIGATP-YENLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTNPLKV 483
+L+A ++ KV
Sbjct: 392 GQLLASIMTKENSKV 406
>gi|385788535|ref|YP_005819644.1| D-amino acid dehydrogenase small subunit [Erwinia sp. Ejp617]
gi|310767807|gb|ADP12757.1| D-amino acid dehydrogenase small subunit [Erwinia sp. Ejp617]
Length = 451
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 134/308 (43%), Gaps = 44/308 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++ + ++ L EAG+ + L ++ L Q EP L L
Sbjct: 151 RQGGTLQLFRTAQQYESAAKDIEVLREAGVPYQLLEAAQLSQVEPALATTHHKLTGGLRL 210
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + ++ + G F + PV LL+ + + VQ + +
Sbjct: 211 PNDETGDCQL---FTQRLAEMAVAAGVNFRF-NTPVDALLQDAN--RIAGVQCGSERI-T 263
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S L+ D+++ +PV P KG+ L +
Sbjct: 264 ADAYVVALGSFSTGLLDDIVK-------LPVYPLKGYSLTIPV----------------- 299
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D T P + +++T + I +G + GFNT++ + +
Sbjct: 300 -KDATAAPLSTVLDESYKVAITRFDNRI---RVGGMAEIVGFNTQLLPARRRTLEMVVHD 355
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
YP+ D+ A F S GLRP PDG PV+G P L ++L TGH LG ++A G+
Sbjct: 356 LYPQGGDIGQATFWS------GLRPMTPDGTPVVGRTP-LKNLYLNTGHGTLGWTMACGS 408
Query: 469 AELVADMV 476
+L+AD++
Sbjct: 409 GQLLADII 416
>gi|388471034|ref|ZP_10145243.1| glycine oxidase ThiO [Pseudomonas synxantha BG33R]
gi|388007731|gb|EIK68997.1| glycine oxidase ThiO [Pseudomonas synxantha BG33R]
Length = 369
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 112/233 (48%), Gaps = 39/233 (16%)
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H V+ +++N+ V V T+ +++ + +V+AAG WSG L+ + + + +PV+
Sbjct: 172 HCEVSGFVQNNN--RVVGVNTATGPVFADQ-VVLAAGAWSGQLL------STLGMTLPVE 222
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P KG +++ + + +SM +L+ A G+++
Sbjct: 223 PVKGQMILYKCASDFL---SSM---------------------VLAKGRYAIPRRDGHIL 258
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GS+ + GF+ +T + + A E P L D A+ + + GLRP P+G P
Sbjct: 259 IGSTLEHEGFDKTPTETALASLKASAVELIPALAD---AEVVGHWA---GLRPGSPEGIP 312
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
IG VPG ++L GH GL LA + +L AD++L +D AP+A GR
Sbjct: 313 YIGEVPGFQGLWLNCGHYRNGLVLAPASCQLFADLLLGRAPIIDPAPYAPAGR 365
>gi|26987349|ref|NP_742774.1| FAD dependent oxidoreductase [Pseudomonas putida KT2440]
gi|24982001|gb|AAN66238.1|AE016252_6 oxidoreductase, FAD-binding [Pseudomonas putida KT2440]
Length = 365
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 37/220 (16%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
G V VQT+ L + + +V++AG WSG DLLR + L++PV+P KG +++ F
Sbjct: 181 GRVTGVQTADGVLAADE-VVLSAGAWSG----DLLRT--LGLELPVEPVKGQMIL---FK 230
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
+ SM +L+ A G++++GS+ + AG++
Sbjct: 231 CAEDFLPSM---------------------VLAKGRYAIPRRDGHILVGSTLEHAGYDKT 269
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
++ + A E P+L + + GLRP P+G P IGPVPG ++L
Sbjct: 270 PTADALESLKASAVELLPELEGATVVAHWA------GLRPGSPEGIPYIGPVPGHEGLWL 323
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L D++ +D AP+A +GR
Sbjct: 324 NCGHYRNGLVLAPASCQLFTDLLTGAEPIIDPAPYAPEGR 363
>gi|425901651|ref|ZP_18878242.1| glycine oxidase ThiO [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397892819|gb|EJL09295.1| glycine oxidase ThiO [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 366
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 43/221 (19%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLE---NF 332
V VQTS + + +V+AAG WSG L+ L L +PV+P KG +++ + +F
Sbjct: 185 VLGVQTSLGEIRGDQ-VVLAAGAWSGELLKSL------GLALPVEPVKGQMILYKCASDF 237
Query: 333 NSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNT 392
S +L+ A G++++GS+ + GF+
Sbjct: 238 LSC---------------------------MVLAKGRYAIPRRDGHILIGSTLEHEGFDK 270
Query: 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVF 452
+ ++ + A E P L A+ + + GLRP P+G P IGPVPGL+ ++
Sbjct: 271 TPTSSALESLKASAIELIPALAQ---AEVVGHWA---GLRPGSPEGIPYIGPVPGLAGLW 324
Query: 453 LATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
L GH GL LA + +L AD++L +D AP+A GR
Sbjct: 325 LNCGHYRNGLVLAPASCQLFADLMLGREPIIDPAPYAPSGR 365
>gi|119945751|ref|YP_943431.1| D-amino-acid dehydrogenase [Psychromonas ingrahamii 37]
gi|119864355|gb|ABM03832.1| D-amino acid dehydrogenase small subunit [Psychromonas ingrahamii
37]
Length = 418
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 190/454 (41%), Gaps = 88/454 (19%)
Query: 84 VIIIGAGIIGLT--------------IARQLLVGSDLSVAVVDKVVPCSGATGAGQG--- 126
V ++GAG+IGLT I RQ V + S A ++ P A A G
Sbjct: 3 VCVLGAGVIGLTSAYYLAKKGFQVTVIDRQPGVALETSFANAGQISPGYSAPWAAPGIPF 62
Query: 127 --YIWMVHR------TPGSE----IW-----------DLALRSNKLWKMLADSLRDQGLD 163
W++ + +P E +W D L +++ LA+ RDQ +
Sbjct: 63 KAVKWLMQKHSPLRLSPEPEMKKLLWMAKMLGQCNGDDYNLNKSRMM-ALAEYSRDQFIA 121
Query: 164 PLQVIGWK----QTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL-- 217
+ IG Q+G+L + R E++ ++ +K L G+ + LS + Q EP L
Sbjct: 122 LRKEIGISYQDGQSGTLQLFRKDEQVEASEKDIKVLKALGVPHQVLSPEQIAQVEPGLAP 181
Query: 218 MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
++ + L D D L +++ + G +F D + +++N +++
Sbjct: 182 VIDKFKGGLRLTGDETGDCYLFCQSLKEKCENL---GVTFQFNSDIKSLSVQAN---KIK 235
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
V+T K +V GS +LL+ +I DIPV P KG+ L + N
Sbjct: 236 GVETQFGVQAFDKVLVCL-----GSYSKELLKACDI--DIPVYPVKGYSLTIPISNE--- 285
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
P + +++T D I + + +G+N ++ ++
Sbjct: 286 ---------------KYAPLSTVMDETYKVAVTRLGDRI---RAAGTAELSGYNLDLPKS 327
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
D I + + + DL LAD+ + GLRP PDG PV+G G+ ++L TGH
Sbjct: 328 RTDTISHVVGDLFAQGCDLSLADYWT------GLRPMTPDGTPVVG-ASGIDGLYLNTGH 380
Query: 458 EGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
LG +++ G+ ++AD++ + ++DS + +
Sbjct: 381 GTLGWTMSCGSGAVIADIIAGSKTEIDSEALSAK 414
>gi|259908276|ref|YP_002648632.1| D-amino acid dehydrogenase small subunit [Erwinia pyrifoliae
Ep1/96]
gi|387871122|ref|YP_005802495.1| D-amino acid dehydrogenase subunit [Erwinia pyrifoliae DSM 12163]
gi|224963898|emb|CAX55401.1| D-amino acid dehydrogenase small subunit [Erwinia pyrifoliae
Ep1/96]
gi|283478208|emb|CAY74124.1| D-amino acid dehydrogenase subunit [Erwinia pyrifoliae DSM 12163]
Length = 433
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 134/308 (43%), Gaps = 44/308 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++ + ++ L EAG+ + L ++ L Q EP L L
Sbjct: 133 RQGGTLQLFRTAQQYESAAKDIEVLREAGVPYQLLEAAQLSQVEPALATTHHKLTGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + ++ + G F + PV LL+ + + VQ + +
Sbjct: 193 PNDETGDCQL---FTQRLAEMAVAAGVNFRF-NTPVDALLQDAN--RIAGVQCGSERI-T 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S L+ D+++ +PV P KG+ L +
Sbjct: 246 ADAYVVALGSFSTGLLDDIVK-------LPVYPLKGYSLTIPV----------------- 281
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D T P + +++T + I +G + GFNT++ + +
Sbjct: 282 -KDATAAPLSTVLDESYKVAITRFDNRI---RVGGMAEIVGFNTQLLPARRRTLEMVVRD 337
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
YP+ D+ A F S GLRP PDG PV+G P L ++L TGH LG ++A G+
Sbjct: 338 LYPQGGDIGQATFWS------GLRPMTPDGTPVVGRTP-LKNLYLNTGHGTLGWTMACGS 390
Query: 469 AELVADMV 476
+L+AD++
Sbjct: 391 GQLLADII 398
>gi|399001528|ref|ZP_10704241.1| glycine oxidase ThiO [Pseudomonas sp. GM18]
gi|398127418|gb|EJM16828.1| glycine oxidase ThiO [Pseudomonas sp. GM18]
Length = 366
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V VQTS + + +V+ AG WSG DLL+E + L++PV+P KG +++
Sbjct: 185 VVGVQTSMGAIRGDE-VVLTAGAWSG----DLLKE--LGLELPVEPVKGQMIL------- 230
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + GF+
Sbjct: 231 ----------YKCAADFL-------PSMVLAKGRYAIPRRDGHILIGSTLEHEGFDKTPT 273
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
T ++ + AAE P L D A+ + + GLRP P+G P IG VPG ++L
Sbjct: 274 DTALESLKASAAELIPALAD---AEVVGHWA---GLRPGSPEGVPYIGRVPGYDGLWLNC 327
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D AP+A GR
Sbjct: 328 GHYRNGLVLAPASCQLFADVMLGRAPIIDPAPYAPVGR 365
>gi|254228647|ref|ZP_04922071.1| FAD dependent oxidoreductase, putative [Vibrio sp. Ex25]
gi|262395095|ref|YP_003286949.1| D-amino acid dehydrogenase small subunit [Vibrio sp. Ex25]
gi|151938826|gb|EDN57660.1| FAD dependent oxidoreductase, putative [Vibrio sp. Ex25]
gi|262338689|gb|ACY52484.1| D-amino acid dehydrogenase small subunit [Vibrio sp. Ex25]
Length = 418
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 137/315 (43%), Gaps = 43/315 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RTP++L +++ ++ L ++G R E + ++ EP L + +D L
Sbjct: 133 RQFGTLQVFRTPQQLQAIEKDMQLLEQSGTRFELMDVERCIEQEPGLDLVKDKLVGGLHL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D + + + + + + VT ++ VQT++ +
Sbjct: 193 PDDETGDCYQFCQQLTELAKAHGVRFEFDTEVSNWVTV------GKKIMGVQTNRGQ-FK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
VVA+G +S +L+ +I ++IPV P KG+ L + +K H S
Sbjct: 246 ADQYVVASGSYSTALLK------QIDIEIPVYPVKGYSLTI----PMKDEHFS------- 288
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
P + ++MT D I + + + AGF+ + Q + I +
Sbjct: 289 -------PRSTVMDETYKVAMTRFDDRIR---VAGTAELAGFDASLPQKRKNTIEMVIRD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ D A+F S G RP PDG P+IG +F TGH LG ++A G+
Sbjct: 339 LFPRCGDFNQAEFWS------GFRPMTPDGTPIIGATK-YDNLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTNPLKV 483
+L+A ++ KV
Sbjct: 392 GQLLASIMAGEKAKV 406
>gi|430749404|ref|YP_007212312.1| glycine oxidase ThiO [Thermobacillus composti KWC4]
gi|430733369|gb|AGA57314.1| glycine oxidase ThiO [Thermobacillus composti KWC4]
Length = 382
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 174/411 (42%), Gaps = 61/411 (14%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IWD 141
V+I+G GIIGL+ A V VV+ P A+GA G + P +
Sbjct: 5 VVILGGGIIGLSAAFAAAA-KGFGVTVVEAGRPGGQASGAAAGMLAPYTENPDGPDPFFA 63
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
L L+S +++ A ++ + +++ +++GSL + +++ L R+ G R
Sbjct: 64 LCLKSLRMYPDWAAAIEEASGRKIEL---RRSGSLAVALGEADVLPLTARMAWQNRYGAR 120
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRH-----FASKGRY 256
AE + SS+L Q EP+L ++ A ++P + + A V +E R A GR
Sbjct: 121 AELVGSSELRQLEPQLAPDIET-ALYIPEEGHVYAPALVEALESACRRRGVAIAAEAGR- 178
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
+R N + + T + ++ +VV G W+G L E E+ L
Sbjct: 179 ----------TVRLNLGADGVEIGTERAGTFTGDVLVVCTGAWTG------LFERELGLP 222
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
+PV P +G + M AG + ++S T
Sbjct: 223 LPVHPIRGQICAY-----------PMPAGLI-------------RRIVVSPQAYWTAKNN 258
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
G LV G+S AGF+T V + I R+ + + +P L+DL + GLRP
Sbjct: 259 GTLVCGASEDVAGFDTSVTERGIARLVRWGPKVFPILKDLEPVHRWA------GLRPGTL 312
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL--TNPLKVDS 485
DG+P+IG + +V +A GH G+ LA T V ++ P+ +D+
Sbjct: 313 DGRPLIGRLGHAPRVVIAAGHYRNGILLAPATGAAVTALLTGEVPPVPLDA 363
>gi|422641865|ref|ZP_16705286.1| FAD dependent oxidoreductase [Pseudomonas syringae Cit 7]
gi|440745955|ref|ZP_20925242.1| FAD dependent oxidoreductase [Pseudomonas syringae BRIP39023]
gi|330954250|gb|EGH54510.1| FAD dependent oxidoreductase [Pseudomonas syringae Cit 7]
gi|440371776|gb|ELQ08608.1| FAD dependent oxidoreductase [Pseudomonas syringae BRIP39023]
Length = 367
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H V+ R S + VQTS + + +++AAG WSG L+ L L++PV+
Sbjct: 171 HCEVSGFTREGS--RISGVQTSAGDITGDR-VILAAGAWSGELLKTL------SLELPVE 221
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P KG +++ + + +SM +L+ A G+++
Sbjct: 222 PVKGQMILYKCASDFL---SSM---------------------VLAKGRYAIPRRDGHIL 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GS+ + GF+ Q ++ + A E P L A+ ++ GLRP P+G P
Sbjct: 258 IGSTLEHEGFDKTTTQAALESLKASAVELLPPLAH---AEPVAQWA---GLRPGSPEGIP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
IGP+ G ++L GH GL LA + +L+ D++L +D AP+A GR
Sbjct: 312 FIGPLEGFDGLWLNCGHYRNGLVLAPASCQLITDLLLDREPIIDPAPYAPAGR 364
>gi|86605050|ref|YP_473813.1| FAD-dependent oxidoreductase [Synechococcus sp. JA-3-3Ab]
gi|86553592|gb|ABC98550.1| FAD-dependent oxidoreductase [Synechococcus sp. JA-3-3Ab]
Length = 367
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 177/398 (44%), Gaps = 56/398 (14%)
Query: 86 IIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIW-MVHRTPGSEIWDLAL 144
+IG G++G IA +L + LSV +D P SGATGA G + + R P E+ L L
Sbjct: 1 MIGCGVVGCAIAYELAT-AGLSVVGIDARDPASGATGASLGVLMGICSRQPDGEVVQLRL 59
Query: 145 RSNKLWKMLADSLR-DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAE 203
+S + + L L D G + + + G L + R EE+ + + +AG R E
Sbjct: 60 KSLEQFDPLIARLEADLG----RTLPVNRHGILKLLRE-EEVDAWQATLAARRQAGYRLE 114
Query: 204 YLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRYAEFYHD 262
+LS ++ +P L + A + P D Q+ +L A +E R R+ F+H
Sbjct: 115 FLSPGEVGSLQPGLR-SDLGGALYSPQDRQIQPRLLTQALVEAAQRRGC---RF--FFHQ 168
Query: 263 PVTCLLRS-NSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
PV + RS + ++AV T +S +V+AAG S L E+ L IP++
Sbjct: 169 PVQKMQRSPDPPFRLQAVYTPAFA-FSAGHVVLAAGLDSSPLAE------ELGLRIPLQA 221
Query: 322 RKGHLLVLENFNSLKLNHASMEAG-YVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
KG +L++ A + G V DL L P D G+L
Sbjct: 222 VKG--------QALRVKAAGIPLGPVVSDEDLHLVP---------------LGD--GSLW 256
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR-IGLRPYMPDGK 439
+G++ +F + + + + A P L + L + + + R +G R
Sbjct: 257 VGATVEFQAPHPQPTLLALQDLLAHAIGICPALAEATLLEHWAGHRPRPLGQR------A 310
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
P++GP PG + +ATGH G+ LA +A ++ D+VL
Sbjct: 311 PILGPAPGYVNLLVATGHYRNGVLLAPISAAILRDLVL 348
>gi|393769671|ref|ZP_10358192.1| glycine oxidase ThiO [Methylobacterium sp. GXF4]
gi|392724850|gb|EIZ82194.1| glycine oxidase ThiO [Methylobacterium sp. GXF4]
Length = 407
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 188/433 (43%), Gaps = 56/433 (12%)
Query: 59 GRALGPTGYSRLNPITASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCS 118
GR PTG + + A + DV I+G G+IGL+IA + L + +V VV++ +
Sbjct: 13 GRRRSPTGLAAQETLPARA-----DVAIVGGGLIGLSIAWR-LARAGRAVVVVERDTIGA 66
Query: 119 GATGAGQGYIW-MVHRTPGSE-IWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSL 176
GA+ A G + PGS+ + LAL S +LW D+L + P I ++ G++
Sbjct: 67 GASLAATGMLAPAAEHEPGSDPLLPLALESLRLWPAFRDALEAETGLP---IDYRPDGTV 123
Query: 177 LIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA 236
++ +E+ L+ R +GL A++L +++ + EP L + P D Q+D
Sbjct: 124 VVAIGRDEVERLRFRYDLQRRSGLDAQWLPGTEVRRLEPGLRPSVTA-GVHCPLDHQVDP 182
Query: 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAA 296
L +A + + R + VT L S G V ++ + + +V+A+
Sbjct: 183 RLVMAALAEACR----RAGVILVERTAVTGL--DWSGGTVTGLRAGDQGV-AAGTVVLAS 235
Query: 297 GCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHP 356
G WSG LL E+ L +PV+P KG L L + G + T
Sbjct: 236 GAWSGE--GGLLPES---LALPVRPLKGQSLALRT---------NARTGTLSRMIWTEQ- 280
Query: 357 GQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDL 416
+ M +D G L++G++ + GF V + + + A P + ++
Sbjct: 281 ----------VHMAPKSD--GQLIVGATVEDCGFRPGVTAGGLYALLEGARRVLPGIEEM 328
Query: 417 CLADFISNRKVRIGLRPYMPDGKPVIGPV-PGLSKVFLATGHEGLGLSLALGTAELVADM 475
+ S G RP D P+I + PGL ATGH G LA TA+ VA++
Sbjct: 329 EVEAVWS------GYRPTSDDDAPIIDILAPGL---VAATGHHRNGYLLAPVTADAVAEL 379
Query: 476 VLTNPLKVDSAPF 488
+ L + PF
Sbjct: 380 ITRGALPEIAKPF 392
>gi|398896335|ref|ZP_10647464.1| glycine oxidase ThiO [Pseudomonas sp. GM55]
gi|398178595|gb|EJM66240.1| glycine oxidase ThiO [Pseudomonas sp. GM55]
Length = 366
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 37/219 (16%)
Query: 275 EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNS 334
+V VQT T+ + +V+ AG WSG DLL+ ++ L PV+P KG +++ +
Sbjct: 184 KVVGVQTHAGTVLGDQ-VVLTAGAWSG----DLLKHLDLTL--PVEPVKGQMILYKCAAD 236
Query: 335 LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEV 394
+ +L+ A G++++GS+ + GF+
Sbjct: 237 FLPS------------------------MVLAKGRYAIPRRDGHILIGSTLEHEGFDKTP 272
Query: 395 EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLA 454
+ ++ + A E P L D A+ + + GLRP P+G P IGPVPG ++L
Sbjct: 273 TGSALESLKASAVELIPALAD---AEVVGHWA---GLRPGSPEGIPYIGPVPGFDGLWLN 326
Query: 455 TGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D AP+A GR
Sbjct: 327 CGHYRNGLVLAPASCQLFADVMLGRVPIIDPAPYAPAGR 365
>gi|399006623|ref|ZP_10709146.1| glycine oxidase ThiO [Pseudomonas sp. GM17]
gi|398121939|gb|EJM11550.1| glycine oxidase ThiO [Pseudomonas sp. GM17]
Length = 366
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 43/221 (19%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLE---NF 332
V VQTS + + +V+AAG WSG L+ L L +PV+P KG +++ + +F
Sbjct: 185 VLGVQTSLGEIRGDQ-VVLAAGAWSGELLKSL------GLALPVEPVKGQMILYKCASDF 237
Query: 333 NSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNT 392
S +L+ A G++++GS+ + GF+
Sbjct: 238 LSC---------------------------MVLAKGRYAIPRRDGHILIGSTLEHEGFDK 270
Query: 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVF 452
+ ++ + A E P L A+ + + GLRP P+G P IGPVPGL+ ++
Sbjct: 271 TPTPSALESLKASAIELIPALAQ---AEVVGHWA---GLRPGSPEGIPYIGPVPGLAGLW 324
Query: 453 LATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
L GH GL LA + +L AD++L +D AP+A GR
Sbjct: 325 LNCGHYRNGLVLAPASCQLFADLMLGREPIIDPAPYAPSGR 365
>gi|15599744|ref|NP_253238.1| D-amino acid oxidase [Pseudomonas aeruginosa PAO1]
gi|12644219|sp|P33642.3|Y4548_PSEAE RecName: Full=Probable D-amino acid oxidase PA4548
gi|9950792|gb|AAG07936.1|AE004868_7 probable D-amino acid oxidase [Pseudomonas aeruginosa PAO1]
Length = 364
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V TS+ + K +++AAG WSG L+ L L++PV P KG +++
Sbjct: 183 VVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLELPVVPVKGQMIL------- 228
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + +GF+
Sbjct: 229 ----------YKCAADFLPR-------MVLAKGRYAIPRRDGHILIGSTLEHSGFDKTPT 271
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+ + AAE P+L D+ + GLRP P+G P IGPVPG ++L T
Sbjct: 272 DEAQESLRASAAELLPELADMQPVAHWA------GLRPGSPEGIPYIGPVPGFDGLWLNT 325
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + L+AD++ +D AP+A GR
Sbjct: 326 GHYRNGLVLAPASCRLLADLMSGREPIIDPAPYAPAGR 363
>gi|451970692|ref|ZP_21923917.1| FAD dependent oxidoreductase, putative [Vibrio alginolyticus E0666]
gi|451933420|gb|EMD81089.1| FAD dependent oxidoreductase, putative [Vibrio alginolyticus E0666]
Length = 418
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 137/315 (43%), Gaps = 43/315 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RTP++L +++ ++ L ++G R E + ++ EP L + +D L
Sbjct: 133 RQFGTLQVFRTPQQLQAIEKDMQLLEQSGTRFELMDVERCIEQEPGLDLVKDKLVGGLHL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D + + + + + + VT ++ VQT++ +
Sbjct: 193 PDDETGDCYQFCQQLTELAKAHGVRFEFDTEVSNWVTV------GKKIMGVQTNRGQFKA 246
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
+ VVA+G +S +L+ +I ++IPV P KG+ L + ME
Sbjct: 247 DQ-YVVASGSYSTALLK------QIDIEIPVYPVKGYSLTI-----------PME----- 283
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D P + ++MT D I + + + AGF+ + Q + I +
Sbjct: 284 --DEHFSPRSTVMDETYKVAMTRFDDRIR---VAGTAELAGFDASLPQKRKNTIEMVIRD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ D A+F S G RP PDG P+IG +F TGH LG ++A G+
Sbjct: 339 LFPRCGDFSQAEFWS------GFRPMTPDGTPIIGATK-YDNLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTNPLKV 483
+L+A ++ KV
Sbjct: 392 GQLLASIMAGEKAKV 406
>gi|313125048|ref|YP_004035312.1| glycine/d-amino acid oxidase, deaminating [Halogeometricum
borinquense DSM 11551]
gi|448287454|ref|ZP_21478666.1| glycine/d-amino acid oxidase, deaminating [Halogeometricum
borinquense DSM 11551]
gi|312291413|gb|ADQ65873.1| glycine/D-amino acid oxidase, deaminating [Halogeometricum
borinquense DSM 11551]
gi|445572334|gb|ELY26875.1| glycine/d-amino acid oxidase, deaminating [Halogeometricum
borinquense DSM 11551]
Length = 378
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 130/315 (41%), Gaps = 46/315 (14%)
Query: 186 VMLKERVKQLCEAGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAY 242
V + + +C+ L EP E + ++++A F P A +
Sbjct: 97 VAMDDEEANVCDETLERVRKRQERFGTPEPGTVEELDADEAQAKFPPLAETERAFFSADA 156
Query: 243 IEKGNRHFASKGRYAEFYHD------PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAA 296
R F R A H V LL + G VE V+ + +++++A
Sbjct: 157 ARVNGRTFEGALRRAGRTHGLSEREASVETLLVDD--GGVEGVELAGGDQIEAESVIIAG 214
Query: 297 GCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHP 356
G WS S +++ ++IPV+P++G ++ L+ + + + + GH+
Sbjct: 215 GAWSQSFG------SQLGVEIPVEPQRGQIVHLDV--DADTDGWPIVSPFRGHY------ 260
Query: 357 GQVNHGQILSISMTATTDVIGNLVLGSSRQF-AGFNTEVEQTIIDRIWKRAAEFYPKLRD 415
M D G + G++R+ +G+ + ++++ P L D
Sbjct: 261 ------------MVPWDD--GRVAAGATRETGSGYAPHTTIEGLTEVFEQVLRVAPGLAD 306
Query: 416 LCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADM 475
L R R+GLRP PDG PV+G VP +S V+L TGH GL L + +LVAD
Sbjct: 307 ATL------RTARVGLRPLSPDGLPVLGSVPDVSDVYLCTGHGPTGLQLGPYSGKLVADA 360
Query: 476 VLTNPLKVDSAPFAV 490
V + D PFAV
Sbjct: 361 VRGEIPETDLEPFAV 375
>gi|386010281|ref|YP_005928558.1| FAD dependent oxidoreductase [Pseudomonas putida BIRD-1]
gi|313496987|gb|ADR58353.1| FAD dependent oxidoreductase [Pseudomonas putida BIRD-1]
Length = 365
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 37/220 (16%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
G V VQT+ L + + +V++AG WSG DLLR + L++PV+P KG +++ F
Sbjct: 181 GRVTGVQTADGVLAADE-VVLSAGAWSG----DLLRT--LGLELPVEPVKGQMIL---FK 230
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
+ SM +L+ A G++++GS+ + AG++
Sbjct: 231 CAEDFLPSM---------------------VLAKGRYAIPRRDGHILVGSTLEHAGYDKT 269
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
++ + A E P+L + + GLRP P+G P IGPVPG ++L
Sbjct: 270 PTGDALESLKASAVELLPELEGATVVAHWA------GLRPGSPEGIPYIGPVPGHEGLWL 323
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L D++ +D AP+A +GR
Sbjct: 324 NCGHYRNGLVLAPASCQLFTDLLTGAEPIIDPAPYAPEGR 363
>gi|49086398|gb|AAT51349.1| PA4548, partial [synthetic construct]
Length = 365
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V TS+ + K +++AAG WSG L+ L L++PV P KG +++
Sbjct: 183 VVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLELPVVPVKGQMIL------- 228
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + +GF+
Sbjct: 229 ----------YKCAADFLPR-------MVLAKGRYAIPRRDGHILIGSTLEHSGFDKTPT 271
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+ + AAE P+L D+ + GLRP P+G P IGPVPG ++L T
Sbjct: 272 DEAQESLRASAAELLPELADMQPVAHWA------GLRPGSPEGIPYIGPVPGFDGLWLNT 325
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + L+AD++ +D AP+A GR
Sbjct: 326 GHYRNGLVLAPASCRLLADLMSGREPIIDPAPYAPAGR 363
>gi|357398831|ref|YP_004910756.1| Glycine oxidase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386354875|ref|YP_006053121.1| glycine oxidase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337765240|emb|CCB73949.1| Glycine oxidase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365805383|gb|AEW93599.1| glycine oxidase [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 405
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 174/416 (41%), Gaps = 52/416 (12%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE- 138
H+ DV+++G GIIGL A + L AV D P GA G + V E
Sbjct: 12 HSHDVLVVGGGIIGLVTAWRA-AQRGLRTAVADPA-PGRGAARVAAGMLAPVTELQYGEQ 69
Query: 139 -IWDLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+ + L S + + A L + G D IG+++ G+L + ++ L+E
Sbjct: 70 TLLEFNLASARRYPSFAAELAEATGAD----IGYRECGTLAVALDADDRAQLRELHAFQG 125
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGR 255
GL A++LS + + EP M+ R + D Q D A + +
Sbjct: 126 SLGLSAQWLSGRECRRLEP--MLSPAVRGGLRVDGDHQTDPRRLAAALLRAAELAGVVLH 183
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
AE V + G V S T + V+AAG WSG++ E VL
Sbjct: 184 RAEAARIEVAG---DRAVGAV----LSDGTFVAAGRTVLAAGSWSGTVAG----VPEHVL 232
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
PV+P KG +L L M G T+ V G + +
Sbjct: 233 P-PVRPVKGQVLRLR-----------MPPGATPFLSRTVR-AVVRGGHVYLVPREN---- 275
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G LV+G++ + G++T V + + + A E P + +L L + I+ GLRP
Sbjct: 276 -GELVIGATSEELGWDTTVTAGGVYELLRDAHELVPGVTELALTETIA------GLRPGS 328
Query: 436 PDGKPVIGP--VPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
PD PV+GP +PGL LATGH G+ L T +++A+++ T L + PF+
Sbjct: 329 PDNAPVLGPTELPGL---LLATGHHRNGVLLTPVTGDVMAEVLTTGELPDAARPFS 381
>gi|290961130|ref|YP_003492312.1| oxidoreductase [Streptomyces scabiei 87.22]
gi|260650656|emb|CBG73772.1| putative oxidoreductase [Streptomyces scabiei 87.22]
Length = 391
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 180/423 (42%), Gaps = 62/423 (14%)
Query: 77 SRCHTFDVIIIGAGIIGLTIA-RQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTP 135
SR HT DV+++G GIIGL A R L G + AVVD P GA G + V
Sbjct: 2 SRTHTSDVLVVGGGIIGLVTAWRAALRG--FATAVVDPE-PGGGAAQVAAGMLAAVTELH 58
Query: 136 GSEIWDLALR---SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERV 192
E L L + + +A+ GL +G+++ G+L + ++ L+E
Sbjct: 59 YGEQTLLGLNVESARRYPAFVAELTEATGLG----LGYRRCGTLAVALDADDRAHLRELH 114
Query: 193 KQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPY-DSQLDAM-LAVAYIEKGNRHF 250
+GL E+LS D + EP L G R D Q+D L+ A +
Sbjct: 115 ALQRRSGLDPEWLSGRDCRRLEPMLAPG--VRGGLRADGDHQIDPRRLSRALV------- 165
Query: 251 ASKGRYAEFYHDPVTCLL---RSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDL 307
A+ GR +H L R +TG V+T ++ S +V+AAG SG L
Sbjct: 166 AACGRAGVVFHRTRAEELTVDRERATG----VRTREDDRLSAGRVVLAAGSLSGRL---- 217
Query: 308 LRETEIVLDI--PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQIL 365
+ D+ PV+P KG +L L S + V + L P +
Sbjct: 218 ---AGVPDDVVPPVRPVKGQVLRLTVPGSYAPFLSRTVRAVVRGSHVYLVPRE------- 267
Query: 366 SISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNR 425
G LV+G++ + G++T V + + + A E P + +L L +
Sbjct: 268 ----------NGELVVGATSEEQGWDTTVTAGGVYELLRDAHELVPGITELPLTE----- 312
Query: 426 KVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDS 485
R GLRP PD P++GP GL + LATGH G+ L T +++A ++ T L ++
Sbjct: 313 -TRAGLRPASPDNAPLLGPT-GLDGLILATGHHRNGVLLTPVTGDVLAHVLTTGELPEEA 370
Query: 486 APF 488
F
Sbjct: 371 RDF 373
>gi|289435259|ref|YP_003465131.1| oxidoreductase, FAD-binding [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171503|emb|CBH28047.1| oxidoreductase, FAD-binding [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 368
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 178/408 (43%), Gaps = 70/408 (17%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI--WMVHRTPGSEIW- 140
++IIGAGI+G + A LL ++ V ++D P A+ A G I W+ R ++ W
Sbjct: 4 IVIIGAGIVGAS-AAYLLSKENVEVTLIDSSEPGQ-ASRAAAGIICPWLSKRR--NKYWY 59
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVML----KERVKQLC 196
+LA S ++ +A LR+ D + G+KQ G L + +T E+L L KER +
Sbjct: 60 ELAKNSAAFYEEIAQMLRE---DTGKETGYKQVGVLALRQTEEKLETLFKLAKERRVEAP 116
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDS---RAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
G+ E L+ ++ + P + G S A S L +A E+G + K
Sbjct: 117 NMGV-IEKLTEAETKEKFPLVKPGFGSIYVSGAARVNGSLFCQTLLMAAKERGVKILVGK 175
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
+ ++ GEV +N Y K +++A G W S + D +TE+
Sbjct: 176 AAF--------------SAAGEVFIHGRKEN--YDK--LIIATGAWLASFLQDAGYKTEV 217
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
+ +KG LL L +F S+ + L P S S+
Sbjct: 218 L------AQKGQLLEL-DFGSMN----------TADWPVILPPS--------SKSIVPFE 252
Query: 374 DVIGNLVLGSSRQ-FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
D G +++G++ + AGF+ E I + +F + + +A+ V +G R
Sbjct: 253 D--GKVIVGATHEKTAGFDIEPTAEGQAEILEEVTKFMEDVSNEKIAN------VTVGTR 304
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNP 480
PY PD P+IG +PG VFLA G GL+ A+++ ++ L P
Sbjct: 305 PYTPDFAPLIGSLPGFDSVFLANGLGASGLTTGPYVAKVLVELALDLP 352
>gi|397693635|ref|YP_006531515.1| FAD dependent oxidoreductase [Pseudomonas putida DOT-T1E]
gi|397330365|gb|AFO46724.1| FAD dependent oxidoreductase [Pseudomonas putida DOT-T1E]
Length = 365
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 37/220 (16%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
G V VQT+ L + + +V++AG WSG DLLR + L++PV+P KG +++ F
Sbjct: 181 GRVTGVQTADGVLAADE-VVLSAGAWSG----DLLRT--LGLELPVEPVKGQMIL---FK 230
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
+ SM +L+ A G++++GS+ + AG++
Sbjct: 231 CAEDFLPSM---------------------VLAKGRYAIPRRDGHILVGSTLEHAGYDKT 269
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
++ + A E P+L + + GLRP P+G P IGPVPG ++L
Sbjct: 270 PTGDALESLKASAVELLPELEGATVVAHWA------GLRPGSPEGIPYIGPVPGHEGLWL 323
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L D++ +D AP+A +GR
Sbjct: 324 NCGHYRNGLVLAPASCQLFTDLLTGAEPIIDPAPYAPEGR 363
>gi|262373205|ref|ZP_06066484.1| glycine oxidase ThiO [Acinetobacter junii SH205]
gi|262313230|gb|EEY94315.1| glycine oxidase ThiO [Acinetobacter junii SH205]
Length = 373
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 169/413 (40%), Gaps = 61/413 (14%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSE 138
+ IIGAGI GL A +L V + D+ A+ AG G Y W TP E
Sbjct: 3 IAIIGAGISGLMTALEL-AEQGCFVDIFDQQQAGQAASWAGGGILSPMYPW--RYTP--E 57
Query: 139 IWDLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCE 197
+ LA L++M + L G+D Q+ TG L+ + ++ + + E
Sbjct: 58 VNQLAQFGKPLYQMWNEKLYPITGID-FQI---HDTGMLIFDQDDFDIGL--SYAAKFNE 111
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQL-DAMLAVAYIEKGNRHFASKGRY 256
++EYL+ + L Q P + + A + P+ S + + L + I +H +
Sbjct: 112 PMQQSEYLNQNQLNQINPRVST-KFREAIYFPHLSNVRNPRLLQSLISYLKQHPLVRF-- 168
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
F H P+ L+ +++ +Q+ + +V+ +G W+ E ++ L+
Sbjct: 169 --FEHSPIEKLIIQKH--KIKGLQSEDGHQHFADHVVLTSGAWTKHW------EEQLQLN 218
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
IPV+P +G +L+ + + + Y L P Q H
Sbjct: 219 IPVRPIQGQMLLFKTPENWLPTMCMNQVMY-------LIPRQDGH--------------- 256
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
+V GSS GFNT V+ I E PKL + K GLRP P
Sbjct: 257 --IVCGSSMADCGFNTTVDDQTQQDILTACLEMVPKLAQFPIV------KRWAGLRPSSP 308
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
G P IG +P + ++ GH GL + G+A+L+ ++L P ++ ++
Sbjct: 309 HGIPYIGAIPEVENLWANFGHFRNGLCMGAGSAQLLRQLILEQPTCIEPNAYS 361
>gi|421524716|ref|ZP_15971337.1| FAD dependent oxidoreductase [Pseudomonas putida LS46]
gi|402751179|gb|EJX11692.1| FAD dependent oxidoreductase [Pseudomonas putida LS46]
Length = 365
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 37/220 (16%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
G V VQT+ L + + +V++AG WSG DLLR + L++PV+P KG +++ F
Sbjct: 181 GRVTGVQTADGVLAADE-VVLSAGAWSG----DLLRT--LGLELPVEPVKGQMIL---FK 230
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
+ SM +L+ A G++++GS+ + AG++
Sbjct: 231 CAEDFLPSM---------------------VLAKGRYAIPRRDGHILVGSTLEHAGYDKT 269
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
++ + A E P+L + + GLRP P+G P IGPVPG ++L
Sbjct: 270 PTGDALESLKASAVELLPELEGATVVAHWA------GLRPGSPEGIPYIGPVPGHEGLWL 323
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L D++ +D AP+A +GR
Sbjct: 324 NCGHYRNGLVLAPASCQLFTDLLTGAEPIIDPAPYAPEGR 363
>gi|152985950|ref|YP_001350520.1| glycine oxidase ThiO [Pseudomonas aeruginosa PA7]
gi|150961108|gb|ABR83133.1| glycine oxidase ThiO [Pseudomonas aeruginosa PA7]
Length = 404
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V TS+ + + +++AAG WSG L+ L L++PV+P KG +++
Sbjct: 223 VVGVATSRGEIRGDR-LLLAAGAWSGELLKPL------GLELPVEPVKGQMIL------- 268
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + AGF+
Sbjct: 269 ----------YKCAADFLPR-------MVLAKGRYAIPRRDGHILIGSTLEHAGFDKTPT 311
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR--IGLRPYMPDGKPVIGPVPGLSKVFL 453
+D + AAE P L + R V GLRP P+G P IGPVPG ++L
Sbjct: 312 GDALDSLRASAAELLPALAE--------QRPVAHWAGLRPGSPEGIPYIGPVPGFDGLWL 363
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
TGH GL LA + L+AD++ +D AP+A GR
Sbjct: 364 NTGHYRNGLVLAPASCRLLADLMSGREPIIDPAPYAPVGR 403
>gi|170744795|ref|YP_001773450.1| glycine oxidase ThiO [Methylobacterium sp. 4-46]
gi|168199069|gb|ACA21016.1| glycine oxidase ThiO [Methylobacterium sp. 4-46]
Length = 410
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 154/362 (42%), Gaps = 57/362 (15%)
Query: 132 HRTPGSEIWDLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKE 190
H G + LAL S +LW D+L GL + ++ G+L+I +E+ L+
Sbjct: 85 HEPGGDALLPLALESQRLWHPFRDALEAASGL----AVDYRSEGTLVIALGRDEVERLRF 140
Query: 191 RVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHF 250
R AGL +LS ++ EP L + F P D Q+D + VA + + R
Sbjct: 141 RHDLQRRAGLDVAWLSGPEVRAREPSLRP-TVTAGLFCPADHQVDPVRTVAALRRALR-- 197
Query: 251 ASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS--GSLMHDLL 308
+ GR E PV L R G V V T+ +L + +V+A+G W+ GSL+ DL
Sbjct: 198 GAGGRLVEGC--PVLSLEREG--GRVTGVITAGGSLRAGT-VVLASGAWAGEGSLVPDLA 252
Query: 309 RETEIVLDIPVKPRKGHLLVLE-NFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSI 367
+PV+P +G L L S +L+H +
Sbjct: 253 --------LPVRPLRGQSLALRVGPRSGRLDHVVWTE---------------------QV 283
Query: 368 SMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKV 427
M D G L++G++ + GF+ + + + + A +P + ++ + + S
Sbjct: 284 HMAPKGD--GQLIVGATVEEIGFDASLTAGGLYALLEGARRAFPGIEEMQVENVWS---- 337
Query: 428 RIGLRPYMPDGKPVIGPV-PGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSA 486
G RP D P++G PGL LA GH G+ LA TA +A ++ L +A
Sbjct: 338 --GFRPTSDDDAPILGEARPGL---VLAVGHHRNGVLLAPVTASAIAGLIGGGALPPVAA 392
Query: 487 PF 488
PF
Sbjct: 393 PF 394
>gi|392422421|ref|YP_006459025.1| FAD-binding oxidoreductase [Pseudomonas stutzeri CCUG 29243]
gi|390984609|gb|AFM34602.1| FAD-binding oxidoreductase [Pseudomonas stutzeri CCUG 29243]
Length = 369
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 39/232 (16%)
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
V LR S + VQT++ + + + +VVAAG WS L+ L L+IPVKP K
Sbjct: 173 VEGFLRDGS--RIVGVQTAQGEMRADQ-VVVAAGAWSAQLLATL------GLEIPVKPMK 223
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
G +++ F + SM +LS A G++++GS
Sbjct: 224 GQMIL---FKCAEDFLPSM---------------------VLSKRRYAIPRRDGHILVGS 259
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
+ + GF+ + ++ + A E P L D + K GLRP PDG P IG
Sbjct: 260 TLEDVGFDKTPTEDALESLRATAIELLPALADAQVV------KHWAGLRPGSPDGVPYIG 313
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGRCC 495
V G ++L GH GL LA + +L+ D++L VD +P+A GR
Sbjct: 314 QVSGFDGLWLNCGHFRNGLVLAPASCQLLVDLMLEQAPIVDPSPYAPAGRIA 365
>gi|157376677|ref|YP_001475277.1| D-amino acid dehydrogenase [Shewanella sediminis HAW-EB3]
gi|157319051|gb|ABV38149.1| D-amino acid dehydrogenase [Shewanella sediminis HAW-EB3]
Length = 462
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 182/483 (37%), Gaps = 98/483 (20%)
Query: 70 LNPITASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDK---------------- 113
+NP T +R +V +IG GIIGL A L + SV VVDK
Sbjct: 2 MNPET--NRNKNKEVAVIGGGIIGLCSA-YYLHKAGRSVVVVDKGEIGKACSFGNAGYIT 58
Query: 114 ---VVPCSGATGAGQGYIWMVHRTPGSE--------------IWDLALRSNKLWKM-LAD 155
VP + +G WM++ P S +W A + K + +
Sbjct: 59 PSHFVPLAAPGMIQKGLKWMLN--PQSPFFVRPSLNLDFLLWLWSFAKKCTKQHTLNTQE 116
Query: 156 SLRDQGLDPLQV-----------IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEY 204
++ D L L + + Q G L++ +T +EL E VKQ GL A+
Sbjct: 117 AILDINLKSLALYEELHNEEDLEFQFYQKGLLMLYKTEKELKEEAETVKQANRLGLNAKM 176
Query: 205 LSSSDLLQAEPEL---MVGEDSRAAFLPYDSQLDAMLAV----AYIEKGNRHFASKGRYA 257
LS S+L EP + ++G AA P D+ + + Y+E F
Sbjct: 177 LSPSELKCLEPNIDFDVIG----AAHYPEDAHIAPYELLNSLRVYLETRGVEFIEHAEIT 232
Query: 258 EFYHDPVTCLLRSNSTGE------VEAVQT--SKNTLYSKKAIVVAAGCWSGSLMHDLLR 309
F D +T N+ + V A T S+ ++A G WSG L
Sbjct: 233 SFNTDSLTSPSGDNTADKNRPRKLVSAGYTKGSEKGNIEADEFILANGAWSGQTAASL-- 290
Query: 310 ETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM 369
L IPV+ KG + L N K A+ + ILS +
Sbjct: 291 ----GLKIPVQAGKGISITLSNDPDNKCAPATFDC---------------RTPFILSEAK 331
Query: 370 TATTDVIGNLVLGSSRQFAGFNTE----VEQTIIDRIWKRAAEFYPKLRDLCLADFISNR 425
A T + G + + + + Q I + K A + P R AD I
Sbjct: 332 VAVTPFNNEIRFGGTMELGVLANQERRGISQNRIKGLLKSAGRYLPAFR----ADSIDQS 387
Query: 426 KVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDS 485
G RP PDG P+IG + + ++TGH +GLSL + +LV++++ + V+
Sbjct: 388 LFWSGFRPCSPDGLPIIGRCHPYTNLTVSTGHAMMGLSLGPISGKLVSEIITGSKTSVNL 447
Query: 486 APF 488
PF
Sbjct: 448 GPF 450
>gi|409405511|ref|ZP_11253973.1| glycine/D-amino acid oxidase [Herbaspirillum sp. GW103]
gi|386434060|gb|EIJ46885.1| glycine/D-amino acid oxidase [Herbaspirillum sp. GW103]
Length = 433
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 175/438 (39%), Gaps = 84/438 (19%)
Query: 84 VIIIGAGIIGLTIARQLL-VGSDLSV------AVVDKVVPCSGATGAGQGYIWMVHRTPG 136
V+I+G+G+IG+T A L G D++V ++ +G G W P
Sbjct: 3 VVILGSGVIGVTSAWYLARAGHDVTVLDRQPGPALETSFGNAGQISPGYASPWAAPGIPL 62
Query: 137 SEI-W------DLALRSNK-------LWKMLA----------------------DSLRDQ 160
I W LA+R + +W+ML D LRD
Sbjct: 63 KAIKWMFQEHAPLAIRPDGTLNQLRWMWQMLRNCNADSYAVNKERMVRLAEYSRDCLRDL 122
Query: 161 GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL--M 218
D +Q G+L + R+ E+L + + L EAG+ E L+ L AEP L +
Sbjct: 123 RADVGIPYEGRQQGTLQLFRSQEQLDGAAKDIAVLQEAGVPFELLTPGQLGGAEPALEKV 182
Query: 219 VGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEA 278
G+ + LP D D L + + K RY V+ + + G++
Sbjct: 183 RGKLTGGLRLPNDETGDCQLFTTRLAQMAEQLGVKFRYG------VSIDALTMAGGKIAG 236
Query: 279 VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLN 338
V K L + VVA G +S +LRE + IPV P KG+ +
Sbjct: 237 VVCGKE-LVQADSYVVALGPYS----PQMLREVPGLPAIPVYPLKGYSIT---------- 281
Query: 339 HASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTI 398
V D + P + I++T D I +G + G++T ++
Sbjct: 282 --------VPITDASAAPVSTILDETYKIAVTRFDDRI---RVGGMAEIVGYDTALKAKR 330
Query: 399 IDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHE 458
+ + +P D A F + GLRP PDG PV+G P +S +++ TGH
Sbjct: 331 RATLELVVNDLFPGAGDTSQASFWT------GLRPMTPDGTPVVGATP-VSNLYINTGHG 383
Query: 459 GLGLSLALGTAELVADMV 476
LG +++ G+ +L+AD++
Sbjct: 384 TLGWTMSCGSGQLLADLI 401
>gi|296115771|ref|ZP_06834397.1| D-amino acid dehydrogenase small subunit [Gluconacetobacter
hansenii ATCC 23769]
gi|295977748|gb|EFG84500.1| D-amino acid dehydrogenase small subunit [Gluconacetobacter
hansenii ATCC 23769]
Length = 418
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 180/441 (40%), Gaps = 92/441 (20%)
Query: 84 VIIIGAGIIGLTIA--------------RQLLVGSDLSVAVVDKVVPCSGATGAGQG--- 126
+I++G+G++G+T A RQ G + S A +V P A AG G
Sbjct: 3 IIVLGSGVVGVTSAWYLAQAGHEVTVVDRQPAAGLETSFANAGQVSPGYSAPWAGPGVPL 62
Query: 127 ----YIWMVHR------TPGSEIWDLAL------------RSNKLWKMLADSLRDQGLDP 164
++ M +R P +W + R+ LA+ RD D
Sbjct: 63 KSVKWLLMKYRPFVFWPMPDPHLWSWMVQMLENCTTAAYDRNKGRMVRLAEYSRDVMRDL 122
Query: 165 LQVIGW----KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVG 220
G +Q G+L + RT +++ ++ L + + E L ++ + AEP L+
Sbjct: 123 RSSTGITYDDRQQGTLQVFRTQKQVDAAAGDIRVLEQYNVGYEVLDAAGCIAAEPGLVSA 182
Query: 221 EDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYA--EFYHDPVTCLLRSNSTGEV 276
D LP D DA K ++ A+ + A F +D L N G++
Sbjct: 183 RDKIVGGLRLPGDETGDAF-------KFTQNLAAMAQKAGVTFLYDTKIRALH-NEGGKI 234
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
VQTS+ L S + V++ G +S +++ L LD+P+ P KG+ + N +
Sbjct: 235 TGVQTSRG-LLSADSYVLSLGSYSPAMVRAL------GLDLPIYPVKGYSITTPIINEAR 287
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV-LGSSRQFAGFNTEVE 395
P + I +T +GN +G + + AGF+T +
Sbjct: 288 ------------------APVSTVMDETFKIGITR----LGNRTRVGGTAELAGFSTRLR 325
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+ + + + +P +L A F + GLRP PDG P+IG +FL T
Sbjct: 326 KPRRETLEHSLTDLFPGGNNLSDATFWT------GLRPMTPDGTPIIGRTR-YDNLFLNT 378
Query: 456 GHEGLGLSLALGTAELVADMV 476
GH LG ++A G+ ++AD++
Sbjct: 379 GHGTLGWTMACGSGRVLADIM 399
>gi|258541720|ref|YP_003187153.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-01]
gi|384041641|ref|YP_005480385.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-12]
gi|384050156|ref|YP_005477219.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-03]
gi|384053266|ref|YP_005486360.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-07]
gi|384056498|ref|YP_005489165.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-22]
gi|384059139|ref|YP_005498267.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-26]
gi|384062433|ref|YP_005483075.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-32]
gi|384118509|ref|YP_005501133.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256632798|dbj|BAH98773.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-01]
gi|256635855|dbj|BAI01824.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-03]
gi|256638910|dbj|BAI04872.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-07]
gi|256641964|dbj|BAI07919.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-22]
gi|256645019|dbj|BAI10967.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-26]
gi|256648074|dbj|BAI14015.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-32]
gi|256651127|dbj|BAI17061.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256654118|dbj|BAI20045.1| D-amino acid dehydrogenase small subunit [Acetobacter pasteurianus
IFO 3283-12]
Length = 418
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 189/443 (42%), Gaps = 91/443 (20%)
Query: 82 FDVIIIGAGIIGLT--------------IARQLLVGSDLSVAVVDKVVPCSGATGAG--- 124
VII+GAG+IG+T I RQ + S A +V P A
Sbjct: 1 MQVIILGAGVIGVTSAWYLASLGHEVTVIDRQPAPALETSFANAGQVSPGYSTPWASPGL 60
Query: 125 --QGYIWMVHRTPGSEI----WDLALRS--NKLWK---------------MLADSLRDQG 161
Q WM+H + +DLA+ +L K +A+ RD
Sbjct: 61 PLQAAKWMLHPKTSPLVIRKRFDLAMLRWMEQLLKNCNAHAYDINKSRMLRIAEYSRD-C 119
Query: 162 LDPLQV---IGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPE 216
LD L+ I + +Q G + + RT +++ + ++ L EA + + L+ +L+ EP
Sbjct: 120 LDALRAETGITYDDRQRGLIQLFRTNKQIDTAQHDMRLLAEANIPHQLLAVDQVLEHEPG 179
Query: 217 LMVGED--SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTG 274
L + + +LP D DA + + ++ R +KG +F +D T L +
Sbjct: 180 LAHAKHLLTGGLYLPNDESGDAHI---FTQRLARMAEAKG--VKFVYD-TTILGLDAAAD 233
Query: 275 EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNS 334
E+ +V+TS + A +VA G +S L+ L + +PV P KG+ L L
Sbjct: 234 EIMSVRTSAGH-FRGDAYIVAMGSYSPLLLRPLR------VHLPVYPVKGYSLTLPLT-- 284
Query: 335 LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV-LGSSRQFAGFNTE 393
D T P + +++T +GN + +G + + G++ +
Sbjct: 285 ----------------DETHAPTSTVNDTSYKLAITR----LGNRIRVGGTAELTGYSQK 324
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ + + +E + DL A + + GLRP PDG PVIGPVP + ++L
Sbjct: 325 LSPDRRETLELSFSELFGG-GDLTAATYWT------GLRPCTPDGTPVIGPVPAFTNLWL 377
Query: 454 ATGHEGLGLSLALGTAELVADMV 476
TGH LG ++A G+ L+AD+V
Sbjct: 378 NTGHGTLGWTMACGSGRLIADLV 400
>gi|381159941|ref|ZP_09869173.1| glycine oxidase ThiO [Thiorhodovibrio sp. 970]
gi|380878005|gb|EIC20097.1| glycine oxidase ThiO [Thiorhodovibrio sp. 970]
Length = 363
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 175/419 (41%), Gaps = 74/419 (17%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGS 137
D +++G G+IGL A +L + SV +V+ ++ AG G Y W H S
Sbjct: 3 DYLVVGGGVIGLLTAHEL-AKTGASVTLVEMSNTGRQSSWAGGGILLPLYPW--HHP--S 57
Query: 138 EIWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+ LAL S + L L DQ G+DP ++ TG +++ +L + Q+
Sbjct: 58 AVNALALWSQAFYPELMQELFDQTGVDP----EYRATGLMILDAEERDLALAWGERHQMP 113
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRY 256
E L + L EP L + D+ A +LP +Q+ + + A R
Sbjct: 114 -----IELLDRARLAAIEPNLELRLDN-ALWLPGVAQVRNPRLMRSLRA-----ALDKRV 162
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
H+ V L G+ V+T+ L + + +VV AG W+ L+ L +I
Sbjct: 163 KIREHEEVIDL--RVHEGQARGVRTTAGQLPAHR-VVVCAGAWTAQLIERLGAAPKI--- 216
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
+P +G +++ + D QI +++ +I
Sbjct: 217 ---RPVRGQMML-----------------FFAKPD-----------QIRQLTLYRERYII 245
Query: 377 ----GNLVLGSSRQF-AGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
G +++GS+R+ AGF+ + +++ A E YP L+ + D + GL
Sbjct: 246 PRQDGRVLIGSTREEEAGFSKTTTSQAKEELYRFAVELYPLLKRAPIEDHWA------GL 299
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
RP P G P IG PG+ +F+ GH GL +A L+ D++L P V P+A+
Sbjct: 300 RPGSPKGVPYIGAYPGVENLFVNAGHFSNGLVTGPASARLICDLMLGRPPIVPPEPYAL 358
>gi|254244553|ref|ZP_04937875.1| hypothetical protein PA2G_05416 [Pseudomonas aeruginosa 2192]
gi|420138342|ref|ZP_14646271.1| D-amino acid oxidase [Pseudomonas aeruginosa CIG1]
gi|421162913|ref|ZP_15621706.1| D-amino acid oxidase [Pseudomonas aeruginosa ATCC 25324]
gi|126197931|gb|EAZ61994.1| hypothetical protein PA2G_05416 [Pseudomonas aeruginosa 2192]
gi|403248922|gb|EJY62449.1| D-amino acid oxidase [Pseudomonas aeruginosa CIG1]
gi|404532680|gb|EKA42553.1| D-amino acid oxidase [Pseudomonas aeruginosa ATCC 25324]
Length = 364
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V TS+ + K +++AAG WSG L+ L L++PV P KG +++
Sbjct: 183 VLGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLELPVVPVKGQMIL------- 228
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + +GF+
Sbjct: 229 ----------YKCAADFLPR-------MVLAKGRYAIPRRDGHILIGSTLEHSGFDKTPT 271
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
++ + AAE P+L D+ + GLRP P+G P IGPVPG ++L T
Sbjct: 272 DEALESLRASAAELLPELADMQPVAHWA------GLRPGSPEGIPYIGPVPGFDGLWLNT 325
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + L+AD++ +D P+A GR
Sbjct: 326 GHYRNGLVLAPASCRLLADLMSGREPIIDPVPYAPAGR 363
>gi|421182609|ref|ZP_15640083.1| D-amino acid oxidase [Pseudomonas aeruginosa E2]
gi|404541757|gb|EKA51106.1| D-amino acid oxidase [Pseudomonas aeruginosa E2]
Length = 364
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V TS+ + K +++AAG WSG L+ L L++PV P KG +++
Sbjct: 183 VLGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLELPVVPVKGQMIL------- 228
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + +GF+
Sbjct: 229 ----------YKCAADFLPR-------MVLAKGRYAIPRRDGHILIGSTLEHSGFDKTPT 271
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
++ + AAE P+L D+ + GLRP P+G P IGPVPG ++L T
Sbjct: 272 DEALESLRASAAELLPELADMQPVAHWA------GLRPGSPEGIPYIGPVPGFDGLWLNT 325
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + L+AD++ +D P+A GR
Sbjct: 326 GHYRNGLVLAPASCRLLADLMSGREPIIDPVPYAPAGR 363
>gi|338730224|ref|YP_004659616.1| FAD dependent oxidoreductase [Thermotoga thermarum DSM 5069]
gi|335364575|gb|AEH50520.1| FAD dependent oxidoreductase [Thermotoga thermarum DSM 5069]
Length = 379
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 161/397 (40%), Gaps = 49/397 (12%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEI 139
+++ V +IGAG++G ++A L V V DK SG+TG G I +P + +
Sbjct: 3 NSYKVAVIGAGVVGCSVAYHLAKLGINDVVVFDKSYISSGSTGRCAGGIRQQWSSPHNVL 62
Query: 140 WDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
LA+RS KL++ L + G+D + +KQ G L++ + EE ++ V+ E G
Sbjct: 63 --LAMRSVKLFEKLES---ETGMD----VEYKQGGYLILSYSEEEAEQFEKNVEMQRELG 113
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
L E LS + + P + + A F D + L K R + F
Sbjct: 114 LDVEILSVKKVKERYPYIDLSGVVLATFCQTDGHANPHLVNFAYAKSARKLGVE----IF 169
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
H V + V+ + L++ K V A + + H + + +D+P
Sbjct: 170 THTEVWGI----------EVKDYEFVLHTTKGKVTAQIVVNAAGPHSREIASMVGVDLPT 219
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
+ + ++V E +K M + G+ + Q HGQ ++G
Sbjct: 220 ESYRHQIMVTE---PVKNFFDPMAISFSGN----FYMRQTKHGQF----------IMGQ- 261
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
G + G N V ++ + K+ +P LR++ + S G PD +
Sbjct: 262 --GDPNEKPGLNYNVTFEFVEEMCKKMTRIFPFLRNVRIVRHWS------GHYNMSPDAQ 313
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
P+IG + + A G G G LA E +A+++
Sbjct: 314 PIIGESTTVKNFYYAVGFSGHGFMLAPAVGEAIAELI 350
>gi|343493618|ref|ZP_08731924.1| D-amino acid dehydrogenase small subunit [Vibrio nigripulchritudo
ATCC 27043]
gi|342825935|gb|EGU60390.1| D-amino acid dehydrogenase small subunit [Vibrio nigripulchritudo
ATCC 27043]
Length = 418
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 138/315 (43%), Gaps = 44/315 (13%)
Query: 164 PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDS 223
PL G K+ G+L + R +L + + + L ++G+ L+ +Q EP L ++
Sbjct: 127 PLNFEG-KELGTLQVFRHASQLDSIGKDMHLLAQSGVEHHLLNVEQCIQKEPGLAAVKEK 185
Query: 224 RAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT 281
+LP D D L +E+ R EF++ + S G+V V T
Sbjct: 186 LTGGLYLPNDETGDCYLFCQQLEQECRKAG-----IEFHYLHQVKKIEHQS-GKVTKVVT 239
Query: 282 SKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHAS 341
K T + K V A G S + + L +++PV P KG+ L + +S N+A
Sbjct: 240 DKQTFVADK-YVFAMGSHSATWLKTL------GINLPVYPVKGYSLTVPIEDS---NNA- 288
Query: 342 MEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDR 401
P + +++T + I + + + AGF+ ++
Sbjct: 289 --------------PTSTVMDETYKVAITRFENRIR---VAGTAELAGFSQDLPHKRTRT 331
Query: 402 IWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLG 461
I K + +PK ++ A++ + GLRP PDG PVIG P LS + TGH LG
Sbjct: 332 ISKVLTDLFPKASNVSKAEYWT------GLRPMTPDGTPVIGKTP-LSNAYTNTGHGTLG 384
Query: 462 LSLALGTAELVADMV 476
+LA G+ +L+AD+V
Sbjct: 385 WTLACGSGKLLADIV 399
>gi|421155968|ref|ZP_15615427.1| D-amino acid oxidase [Pseudomonas aeruginosa ATCC 14886]
gi|404519561|gb|EKA30295.1| D-amino acid oxidase [Pseudomonas aeruginosa ATCC 14886]
Length = 364
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V TS+ + K +++AAG WSG L+ L L++PV P KG +++ +
Sbjct: 183 VVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLELPVVPVKGQMILYKCAADF 235
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+L+ A G++++GS+ + +GF+
Sbjct: 236 LPR------------------------MVLAKGRYAIPRRDGHILIGSTLEHSGFDKTPT 271
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
++ + AAE P+L D+ + GLRP P+G P IGPVPG ++L T
Sbjct: 272 DEALESLRASAAELLPELADMQPVAHWA------GLRPGSPEGIPYIGPVPGFDGLWLNT 325
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + L+AD++ +D P+A GR
Sbjct: 326 GHYRNGLVLAPASCRLLADLMSGREPIIDPVPYAPAGR 363
>gi|218709126|ref|YP_002416747.1| D-amino acid dehydrogenase small subunit [Vibrio splendidus LGP32]
gi|254766977|sp|B7VMK8.1|DADA_VIBSL RecName: Full=D-amino acid dehydrogenase small subunit
gi|218322145|emb|CAV18259.1| D-amino acid dehydrogenase small subunit [Vibrio splendidus LGP32]
Length = 417
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 133/312 (42%), Gaps = 51/312 (16%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R+ ++L +++ +K L E+G+ L E L +D +L
Sbjct: 133 RQKGTLQVFRSEKQLDAIQQDMKLLTESGIEHSLFDVDQCLSVESGLADVKDKLVGGLYL 192
Query: 229 PYDSQLDA-MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
P+D D + EK +K F D L + +E + T++ +
Sbjct: 193 PHDETGDCHQFCLTLTEK------AKQLGVRFVFDTEVVSLNHQNRA-IETITTTQGE-F 244
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
A VVA+G +S L+ ++ L IPV P KG+ L L N K
Sbjct: 245 KADAYVVASGSYSRELLK------QVDLSIPVYPVKGYSLTLPIVNVDK----------- 287
Query: 348 GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNT---EVEQTIIDRIWK 404
P + ++MT D I + + + AGF+ E + ID + K
Sbjct: 288 -------SPTSTVMDETYKVAMTRFDDRIR---IAGTAELAGFDYLIPEKRKATIDMVIK 337
Query: 405 RAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSL 464
+ +P+ D A++ + GLRP PDG P+IG P + +F TGH LG ++
Sbjct: 338 ---DLFPQAGDFSKAEYWT------GLRPMTPDGTPIIGKTP-IKNLFTNTGHGTLGWTM 387
Query: 465 ALGTAELVADMV 476
A G+ +++A +V
Sbjct: 388 ACGSGKILASVV 399
>gi|261343599|ref|ZP_05971244.1| D-amino acid dehydrogenase, small subunit [Providencia rustigianii
DSM 4541]
gi|282567980|gb|EFB73515.1| D-amino acid dehydrogenase, small subunit [Providencia rustigianii
DSM 4541]
Length = 433
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 173/446 (38%), Gaps = 97/446 (21%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQ------GYI--------- 128
V+I+GAG+IG+T A L V VVD+ + + T AG GY
Sbjct: 3 VLILGAGVIGVTTA-WYLAQEGHEVLVVDRQMDVAEETSAGNAGQISPGYATPWGAPGIP 61
Query: 129 -----WMVHR------TPGSEIWDLALRSNKLWKMLA----------------------D 155
WM + P ++ L +W+ML D
Sbjct: 62 LKAVKWMFEKHAPLAIKPDGSLFQLRW----MWQMLKNCDMQHYTMNKSRMVRIAEYSRD 117
Query: 156 SLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP 215
+R D ++ G+L + RT ++ + L + G+ E LS+ L+ AEP
Sbjct: 118 CIRQLRADTGISYEGREGGTLQLFRTTKQFDNAANDIAILQQEGVPYELLSAEQLVTAEP 177
Query: 216 ELMVGEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST 273
L + LP D D + K + K R+ V +L N
Sbjct: 178 ALKFVQHKLTGGLRLPNDETGDCQQFTKKLAKMAQLAGVKFRFGCH----VENILTDNK- 232
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
+ +Q TL + + VVA G +S +++ L++ IPV P KG+ L + +
Sbjct: 233 -RISGIQIDGETLVADR-YVVAMGSYSTAILQSLVK-------IPVYPLKGYSLTMPIVD 283
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
HA P + I++T D I +G + GFN +
Sbjct: 284 E---AHA---------------PVSTVLDETYKIAVTRFDDRI---RVGGMAEVVGFNLD 322
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ + D + + Y D+ A F + GLRP PDG P++GP S ++L
Sbjct: 323 ILKKRCDTLKMVVQDLYHGGGDISQAQFWT------GLRPMTPDGTPIVGPT-AYSNLYL 375
Query: 454 ATGHEGLGLSLALGTAELVADMVLTN 479
TGH LG ++A G+ +L+AD++ N
Sbjct: 376 NTGHGTLGWTMACGSGKLLADLISGN 401
>gi|376317167|emb|CCG00538.1| D-amino acid dehydrogenase small subunit [uncultured Flavobacteriia
bacterium]
Length = 417
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 134/322 (41%), Gaps = 57/322 (17%)
Query: 174 GSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYD-- 231
G L++ +T E K+ GL+ Y + +L +P+L +D + L YD
Sbjct: 140 GLLMLYKTKAAGEAENEVAKKAANLGLQVSYPNQIELNSLQPQL--SKDIQGGIL-YDCD 196
Query: 232 -----SQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTL 286
+++ L ++ G + K E ++ +T A+ T KN
Sbjct: 197 SHTTPTEIMPKLKKKLLDSGVKFITEKVCRFELQNNKLT------------AIVTDKNN- 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
Y + +V+AAG WSG L L +D+ ++ KG+ + ++ +K+ MEA
Sbjct: 244 YPTEEVVIAAGAWSGQLAKQL------NIDLSLEAGKGYRIDVKRETGIKIPAILMEA-- 295
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
A T + G + + +G NT + + ++ I K A
Sbjct: 296 ----------------------KVAVTPMKGFTRFAGTMELSGINTNIRKERVNAIVKAA 333
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+YP L+ + A+ G+RP PDG P IG L + ATGH +G SL
Sbjct: 334 EAYYPGLK-ITAAE---KEAAASGMRPVSPDGLPYIGRSKALKNLCFATGHAMMGWSLGP 389
Query: 467 GTAELVADMVLTNPLKVDSAPF 488
T +LV++++L +D APF
Sbjct: 390 ATGKLVSEIILNKKPSMDLAPF 411
>gi|338213240|ref|YP_004657295.1| D-amino-acid dehydrogenase [Runella slithyformis DSM 19594]
gi|336307061|gb|AEI50163.1| D-amino-acid dehydrogenase [Runella slithyformis DSM 19594]
Length = 415
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 151/339 (44%), Gaps = 54/339 (15%)
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
D++L S KL++ LA S GW + G L++ + + + E +AG+
Sbjct: 110 DISLLSKKLFQELAASGEAD-------FGWHERGLLMLYKNADTEHEMAEEAHLANQAGI 162
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAA-FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
AE L+ + + EP++ V D R A + P D+ + L + + K + +
Sbjct: 163 VAERLTGAQVQALEPDVRV--DVRGAVYYPGDAHITPNLLLKNLLS-----FLKNQGVQV 215
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
+ T E+ AVQT+K + ++ +V+AAG WS L L + +P+
Sbjct: 216 LENEEIFGFEKEGT-EIRAVQTNKGKHHVEE-LVIAAGAWSPVLTEKL------GISLPL 267
Query: 320 KPRKGHLLVLENF-NSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG- 377
+ KG+ +L N N++K+ +EA AT +G
Sbjct: 268 QGGKGYSFMLNNVTNNIKVPAIMLEA-------------------------RATATPMGS 302
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
+L + + AG + V + I + +YP+L ++ L S V GLRP PD
Sbjct: 303 DLRFAGTLEVAGTDMTVNMNRVRGIVQGINNYYPEL-EVTLPKVES---VWRGLRPCSPD 358
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
G P IG V GL V LATGH +G+SL T +LV++++
Sbjct: 359 GLPYIGRVRGLVNVTLATGHGMMGISLGPATGKLVSEII 397
>gi|291569932|dbj|BAI92204.1| probable D-amino acid oxidase [Arthrospira platensis NIES-39]
Length = 367
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 161/392 (41%), Gaps = 75/392 (19%)
Query: 106 LSVAVVDK-----VVPCSGATGAGQGYIW------MVHRTPGSEIWDLALRSNKLWKMLA 154
LSVA+ + V CS T GY+ R P S + DLALRS L++
Sbjct: 21 LSVAIALQWRGATVTVCSRNTQEAAGYVAAGMLAPQAERIPPSPLLDLALRSRSLYQPWT 80
Query: 155 DSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQA 213
++ GLD G+ G L P + ++ Q E+ A +L + L+
Sbjct: 81 SKIQHLTGLD----TGYWPCGIL----APVYEYPQQTKLPQTPES--PAIWLEADQLITQ 130
Query: 214 EPELMVGEDSRAAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNS 272
+P L E + P D Q+D L + + ++ + R D V + +
Sbjct: 131 QPGLS-SEVVGGWWFPQDGQVDNRRLLMRSLIHASQQLGIQIR------DGVEVQEIATT 183
Query: 273 TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVL--- 329
T +V+ + T++ + I+ AAG WSG +L IPV P KG +L L
Sbjct: 184 TNQVKQINTNQGAIVGSHYIL-AAGSWSGQ-----------ILPIPVYPIKGQMLSLRVP 231
Query: 330 ENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAG 389
+ + L L +G I + D G +VLG++ + G
Sbjct: 232 DYISELPLKQVLFGSG---------------------IYIVPRRD--GLIVLGATAENVG 268
Query: 390 FNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLS 449
F+ + I+ + A YP L + + +F S G RP PD P++G P
Sbjct: 269 FHKSLTPKGINTLLSEATRLYPGLAEFPIEEFWS------GFRPTTPDELPILGRSP-FE 321
Query: 450 KVFLATGHEGLGLSLALGTAELVADMVLTNPL 481
+ LATGH G+ LA TAEL+AD+V + L
Sbjct: 322 NLTLATGHHRNGILLAPITAELIADLVCYDKL 353
>gi|53803166|ref|YP_115116.1| oxidoreductase, FAD-binding [Methylococcus capsulatus str. Bath]
gi|53756927|gb|AAU91218.1| oxidoreductase, FAD-binding [Methylococcus capsulatus str. Bath]
Length = 361
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 180/413 (43%), Gaps = 62/413 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVH--RTPGSEIW 140
DV+IIGAG I +A + L + SV +VDK ++ AG G + + R P +
Sbjct: 5 DVLIIGAG-ISGLLAARELAAAGRSVRIVDKGPAGRESSWAGGGILSPLRPWRMP-EAVT 62
Query: 141 DLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA- 198
L S + + L + L + GLDP W+Q+G L++ PEE V C A
Sbjct: 63 ALCAWSQQCYPGLVEELLESTGLDP----EWRQSGLLIL--DPEE----PAAVDAWCAAH 112
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
G+R E++ + L EP L SR+A LP +Q+ + I R
Sbjct: 113 GVRREWIEPAALASLEPRL--APSSRSAIRLPGVAQVRNPRLLRAILADVRRLG-----I 165
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
D + + G V V T+K ++ + +V AG WS ++ LL ++
Sbjct: 166 AIEEDAAVTAIEARD-GRVSRVATAKG-VFVAETYLVTAGAWSAEVLGALLP------NL 217
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
PV P KG +L + L + H + D L P + G +L S
Sbjct: 218 PVVPVKGQMLAFQASGGL-VEHIVLAG------DRYLIPRR--DGIVLCGSTV------- 261
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
RQF +VE I + + A + L D A+ + + GLRP P+
Sbjct: 262 -----EQRQFDKV-PDVEGRRI--LLEFACRWLSALAD---AEVVGHWA---GLRPGSPE 307
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
G P IGPVP + ++L+ GH GL++A +A LVAD++L P V + P+ V
Sbjct: 308 GIPFIGPVPSFANLYLSCGHFRNGLTMAPASARLVADLILGRPPIVPAQPYGV 360
>gi|424065887|ref|ZP_17803360.1| FAD-binding oxidoreductase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|408002905|gb|EKG43131.1| FAD-binding oxidoreductase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 367
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H V+ R S + VQTS + + +++AAG WSG L+ L L++PV+
Sbjct: 171 HCEVSGFTREGS--RISGVQTSAGDITGDR-VILAAGAWSGELLKTL------GLELPVE 221
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P KG +++ + + +SM +L+ A G+++
Sbjct: 222 PVKGQMILYKCASDFL---SSM---------------------VLAKGRYAIPRRDGHIL 257
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GS+ + GF+ Q ++ + A E P L A+ ++ GLRP P+G P
Sbjct: 258 IGSTLEHEGFDKTTTQAALESLKASAVELIPPL---AHAEPVAQWA---GLRPGSPEGIP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
IGP+ G ++L GH GL LA + +L+ D++L +D AP+A GR
Sbjct: 312 FIGPLDGFDGLWLNCGHYRNGLVLAPASCQLITDLLLDREPIIDPAPYAPTGR 364
>gi|349699821|ref|ZP_08901450.1| D-amino acid dehydrogenase small subunit [Gluconacetobacter
europaeus LMG 18494]
Length = 418
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 173/440 (39%), Gaps = 90/440 (20%)
Query: 84 VIIIGAGIIGLTIA--------------RQLLVGSDLSVAVVDKVVPCSGATGAGQGY-- 127
+I++G+G++G+T A RQ G + S A +V P + AG G
Sbjct: 3 IIVLGSGVVGVTSAWYLAQAGHEVTVVDRQPEAGLETSFANAGQVSPGYSSPWAGPGVPL 62
Query: 128 ---IWMVHRTPGSEIWDLALRSNKLWKMLA--------------------------DSLR 158
W++ + W + LWK L D +R
Sbjct: 63 KSVKWLLMKYRPFVFWPMP--DPHLWKWLVQMLENCTTAAYDRNKGRMVRIAEYSRDVMR 120
Query: 159 DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELM 218
D +Q G+L + RT +++ + ++ L + + E L+ ++AEP L
Sbjct: 121 DLRASTGITYDDRQQGTLQVFRTQKQMDAIAGDIRVLEQYNVPYEVLTREGCVRAEPGLA 180
Query: 219 VGEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
D LP D DA L R A + +H +N G +
Sbjct: 181 SSADKIVGGLRLPGDETGDAFLFT------QRLAAMAAKAGVTFHYDTRIRTMTNDGGRI 234
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
++TS+ + + + V++ G +S +++ L LD+P+ P KG+ L + N +
Sbjct: 235 TGIETSRGQMVAD-SYVLSLGSYSPAMVRHL------GLDLPIYPVKGYSLTADIVNEKQ 287
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
+++ D T G G+ + + TA + AGF+T++
Sbjct: 288 APVSTI-------MDETFKIGITRLGERIRVGGTA--------------ELAGFSTKLRA 326
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + +P ++ A F + GLRP PDG P+IG +FL TG
Sbjct: 327 PRRETLEHSVTDLFPGGGNIAAARFWT------GLRPMTPDGTPIIGRTK-YDNLFLNTG 379
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG ++A G+ ++AD++
Sbjct: 380 HGTLGWTMACGSGRVLADIM 399
>gi|269838472|ref|YP_003320700.1| FAD dependent oxidoreductase [Sphaerobacter thermophilus DSM 20745]
gi|269787735|gb|ACZ39878.1| FAD dependent oxidoreductase [Sphaerobacter thermophilus DSM 20745]
Length = 374
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 34/205 (16%)
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ A+++A G WS +L I L IPV P++G +L L + + + G+
Sbjct: 200 AADAVIIAGGAWSNTLGE------AIGLRIPVAPQRGQILHL-DLPETDTSRWPIITGFH 252
Query: 348 GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQ-FAGFNTEVEQTIIDRIWKRA 406
H+ LT +V V G++R+ +G++ + + A
Sbjct: 253 SHYMLTFPTSRV--------------------VAGATREDGSGYDYRMTAGGVHEALSEA 292
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
P L L R+VRIGLRP PD P++G PGL+ V+LATGH GL L
Sbjct: 293 LRLAPGLAPATL------REVRIGLRPASPDHLPILGAAPGLANVYLATGHGPSGLQLGA 346
Query: 467 GTAELVADMVLTNPLKVDSAPFAVQ 491
+ +VAD+ + +D +PFA++
Sbjct: 347 YSGTVVADLARGEAVDIDLSPFALE 371
>gi|407972829|ref|ZP_11153742.1| FAD dependent oxidoreductase [Nitratireductor indicus C115]
gi|407431600|gb|EKF44271.1| FAD dependent oxidoreductase [Nitratireductor indicus C115]
Length = 395
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 176/420 (41%), Gaps = 64/420 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLA 143
V+I+G+GI+G A L + V +V+ V P + ATGA G + + + PG + + A
Sbjct: 13 VVIVGSGIVGAATA-YFLARRGIEVRLVEAVAPAAEATGAADGAVSVASKRPGP-MMEAA 70
Query: 144 LRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAE 203
L +L++ L G +K + ++ + E +L+ L AG+R +
Sbjct: 71 LAGVRLYRELESEGLFSGF-------FKTRSTFIVAASQAECAVLEAHSAALAGAGVRID 123
Query: 204 YLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGN--------RHFASKGR 255
L +L Q P + +AM+AV ++G+ R + G
Sbjct: 124 ILQHEELRQRMPAV---------------SGEAMMAVEVHDEGHAIGYQIVHRLLTAAGI 168
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLM--HDLLRETEI 313
V L S+S V V T K+ A+VVAAG SG+L+ D+L
Sbjct: 169 VVH-RGAVVEGFLPSSSGNGVRGVMT-KHGPVEGDAVVVAAGTGSGALLGFSDVL----- 221
Query: 314 VLDIPVKPRKGHLLVLENFNSLK--LNHASMEAGYVGHHDLTLHPGQVNHGQ---ILSIS 368
PRKG LLV E L L A M Y+ L G N G +
Sbjct: 222 ------TPRKGQLLVTERAPELNAGLPGAIMSGRYL------LSKGSQNSGHGAPARGLG 269
Query: 369 MTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR 428
+ G ++G +R+ G T + + +I + A P L ++ L +
Sbjct: 270 LVIDPLRTGQFLIGGTREDHGDRTLNDVEAVAKILRDAVALLPGLANVRLLRSFA----- 324
Query: 429 IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G R + DG P+IG VPG +F+ATG EG G+ L T ++VAD+V +D PF
Sbjct: 325 -GSRTAVADGLPLIGRVPGRDNLFVATGFEGDGICLGPLTGKVVADLVCGEAPSLDLRPF 383
>gi|417303626|ref|ZP_12090675.1| D-amino acid dehydrogenase small subunit [Rhodopirellula baltica
WH47]
gi|327540047|gb|EGF26642.1| D-amino acid dehydrogenase small subunit [Rhodopirellula baltica
WH47]
Length = 419
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 178/449 (39%), Gaps = 90/449 (20%)
Query: 86 IIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IWDLA 143
I+G+GI+G+ A L + L V V+D+ + A GYI H P +E + +A
Sbjct: 12 IVGSGIVGIACA-HYLSEAGLDVTVIDRGTIAGECSHANCGYICPSHALPLTEPGAFSVA 70
Query: 144 LRS---------------NKLWKMLADSLRD-------QGLDPLQVIGWKQTGSL--LIG 179
L+S LWK + + PLQ I LI
Sbjct: 71 LKSIFNPRSPFRVKPQISPALWKWMLQFAKRCTHRKMLAAGKPLQAILEASMSEYHSLIE 130
Query: 180 RTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLP-YDSQLDAML 238
R + +E + + + E + +D L +E + LP +DS L L
Sbjct: 131 RLSLDCEWKEEGLLYVLQTERGMESFAKTDRLVSEEFGIPATRIDGINLPKFDSGLKEGL 190
Query: 239 AVAYI---------EKGNRHFASK--GRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNT 285
A A++ +K N +++K R F C L+S G++ A++T++
Sbjct: 191 AGAFLYPNDTSVRPDKLNSQWSAKLQERGVRFIEK---CELKSIRKEAGQIVAIETNRGD 247
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
+ V A G WS E+ + +PV+P KG+ + +E K H+ A
Sbjct: 248 -FKTDCFVFAMGAWSTKW------ESALQCSVPVQPGKGYSVTIE-----KPEHSPNHAI 295
Query: 346 YVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKR 405
H + + P + G L GS +FAG++T + + I
Sbjct: 296 LFPEHKVGVSP--FDEG----------------LRFGSMMEFAGYDTSIPRHRIQ----- 332
Query: 406 AAEFYPKLRDLCLADFISN-----RKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
+LRD +++ + G RP D P+IG +P LS LATGH L
Sbjct: 333 ------QLRDSARPYLVASVDGPAQSQWYGWRPMTWDSLPIIGTLPELSNGLLATGHNML 386
Query: 461 GLSLALGTAELVADMVLTNPLKVDSAPFA 489
GLSLA T L+ +++ +D AP++
Sbjct: 387 GLSLAPATGRLIGEIITGQQTHLDPAPYS 415
>gi|429334370|ref|ZP_19215036.1| FAD-binding oxidoreductase [Pseudomonas putida CSV86]
gi|428760947|gb|EKX83195.1| FAD-binding oxidoreductase [Pseudomonas putida CSV86]
Length = 367
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 39/233 (16%)
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H PVT +R + V+T + + + + +V+ AG WSG DLLR + ++PV
Sbjct: 170 HCPVTGFIREGE--RIAGVETVEGVIAADE-VVLTAGAWSG----DLLRP--LGFELPVV 220
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P KG +++ F + SM +L+ A G+++
Sbjct: 221 PVKGQMIL---FKCAEDFLPSM---------------------VLAKGRYAIPRRDGHIL 256
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GS+ + AG++ +D + A E P L LA + GLRP P+G P
Sbjct: 257 VGSTLEHAGYDKTPTDEALDSLRASAIELVPALAGAELAGHWA------GLRPGSPEGVP 310
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
IG VPG ++L GH GL LA + +L +D++ +D AP+A QGR
Sbjct: 311 YIGRVPGCEGLWLNCGHYRNGLVLAPASCQLFSDLLAGREPIIDPAPYAPQGR 363
>gi|339008096|ref|ZP_08640670.1| glycine oxidase [Brevibacillus laterosporus LMG 15441]
gi|338775299|gb|EGP34828.1| glycine oxidase [Brevibacillus laterosporus LMG 15441]
Length = 376
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 140/307 (45%), Gaps = 52/307 (16%)
Query: 174 GSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL--MVGEDSRAAFLPYD 231
G L + T E L+ER + G LS ++ + EP L MV +A + P++
Sbjct: 94 GILTVAMTDMEEEWLQERYQWQKSEGYDIRLLSGKEVQKQEPHLSKMV---RQAIYSPHE 150
Query: 232 SQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTG-EVEAVQTSKNTLYSKK 290
+ ++ L V + +K R+ + + T +++ TG ++ V T K L +
Sbjct: 151 ADINNRLLVEALV-----IQAKNRHVRLFQN--TAVIKLKHTGRKMTGVVTEKGELEANH 203
Query: 291 AIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM-EAGYVGH 349
++VAAG W+ D+LR+ + ++PV P +G + +++ N L L+H + GY
Sbjct: 204 -VIVAAGAWTA----DILRQVGV--NVPVYPVRGQIAAVDS-NHLPLSHVVFGKNGY--- 252
Query: 350 HDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEF 409
L P Q +++G++ AGF+ + ++ A
Sbjct: 253 ----LVPKQDR-----------------RIIVGATEDLAGFDRSSTVYGVSKVLTGAMSI 291
Query: 410 YPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTA 469
P + + A F+ + GLRP DG P++GPVP S + LA GH G+ LA TA
Sbjct: 292 VPAISE---APFL---QAWAGLRPATADGHPILGPVPNWSGLTLACGHYRNGILLAPITA 345
Query: 470 ELVADMV 476
+L+A+ V
Sbjct: 346 KLIAEYV 352
>gi|392548462|ref|ZP_10295599.1| hydrogen cyanide synthase HcnC [Pseudoalteromonas rubra ATCC 29570]
Length = 408
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 156/363 (42%), Gaps = 53/363 (14%)
Query: 132 HRTPGSEIWDLALRSNKLWKML-ADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKE 190
H+ P ++ AL SN ++ L + L G+D +++TG I E+ + ++
Sbjct: 86 HQLPDC-FFEFALTSNNMYPALHQEMLEKHGVD----FKFERTGLKFIMYNEEDRLYAEQ 140
Query: 191 RVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAM-LAVAYIEKGNR 248
+ + + +L + L + EP V +D+ A D Q++ L AY+E +
Sbjct: 141 ITQGIPHLADQVRWLDAEQLKKEEP--YVTDDAIGAIDFICDHQVNPYRLVDAYLEGARQ 198
Query: 249 HFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLL 308
+ S + + VT ++R+ + VE V+TS + ++ A+G W+ L
Sbjct: 199 NGVSL-----YLNTEVTSVIRNGNV--VEGVKTSDEVFFCD-TLINASGAWANELYQQAT 250
Query: 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSIS 368
T +PV P KG +++ E + S Y+ D +G+IL
Sbjct: 251 GRT-----MPVYPVKGQIVLSERMPKIMNGCISTSDCYIAQKD---------NGEIL--- 293
Query: 369 MTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR 428
+GSS + GF+T I + + A + P L++ S ++
Sbjct: 294 ------------IGSSTEEKGFDTTNSLDKIQELSQGAMKCLPILKE------SSIKRCW 335
Query: 429 IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
GLRP PD P++GPV G+ A GH G+ + T +L+ ++++ +D PF
Sbjct: 336 AGLRPGTPDELPILGPVEGVEGYLNACGHFRTGILTSAITGQLMTELIMGKTPSLDLTPF 395
Query: 489 AVQ 491
+V+
Sbjct: 396 SVE 398
>gi|407795831|ref|ZP_11142788.1| glycine oxidase [Salimicrobium sp. MJ3]
gi|407019651|gb|EKE32366.1| glycine oxidase [Salimicrobium sp. MJ3]
Length = 362
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 168/402 (41%), Gaps = 50/402 (12%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRT-PGSEIW 140
+DVII G G+IG +IA QL + V +++K A+ A G + + P S +
Sbjct: 2 YDVIIAGGGVIGSSIAFQL-SKRNYRVLIIEKEEIGQKASRAAAGMLGAQNEVGPDSPLS 60
Query: 141 DLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
LA S +++ LA+ L G+D +++I Q G + + RT EE LK ++ +G
Sbjct: 61 RLARESREMFPSLAEELESVSGID-IELI---QNGIVRVARTEEEAKQLKRENERQQRSG 116
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
+E+LS S L + EP L + ++P D Q++A + + F+++
Sbjct: 117 DCSEWLSRSRLQEREPRLSHLSVTGGLYMPGDGQVNAPSLTKALAHASVEFSTE----IM 172
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
H V +L N V V+T+ + + + ++ A G WS +L +T L++
Sbjct: 173 EHTEVLDVLTENR--HVTGVKTTSGNILA-QTVISAGGTWS----RELFEKTGYTLNM-- 223
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
P KG + H + I S G
Sbjct: 224 YPVKGECFSV------------------------YHKEHLTTASIFSPGCYIVPKAGGRF 259
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++G++++ N V + + +RA P L+ + S G RP G
Sbjct: 260 IVGATQKPDDPNNSVSIGGLRSLMERAIRLIPDLQHAEWGEAWS------GHRPKTQTGL 313
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPL 481
P +G P + +++A GH G+ LA T L+AD + P+
Sbjct: 314 PYMGEHPEIDGLWVAAGHFRNGILLAPITGSLMADYIEGKPV 355
>gi|269836203|ref|YP_003318431.1| FAD dependent oxidoreductase [Sphaerobacter thermophilus DSM 20745]
gi|269785466|gb|ACZ37609.1| FAD dependent oxidoreductase [Sphaerobacter thermophilus DSM 20745]
Length = 409
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 177/418 (42%), Gaps = 65/418 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWM---VHRTPGSEI 139
+V++IGAG+ G ++A QL + V V+DK CSGA+G G +H G +
Sbjct: 14 EVVVIGAGVTGCSVAYQLAMRGK-QVVVLDKRGICSGASGRNGGLTGAGSSLHSAAGRAV 72
Query: 140 WDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
+ L R N +ML + L + D + + G+L I T E+ L+E V++ E G
Sbjct: 73 YALT-REN--LRMLQEDLARELDDDFSL---RLPGTLDIATTEEQYKHLEESVRRQQEHG 126
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPY-DSQLDAMLAVAYIEKGNRHFASKGRYAE 258
+ E L ++ + P +V ++ A L L V + +G RH+ ++
Sbjct: 127 IDVELLDPQEVRELVP--VVSDNILGAKLARGHGHLWPFQLVHALARGARHYGAR----F 180
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
H PVT +L S G V V+T+ T + +VVAA W+ L+ DL + +
Sbjct: 181 VTHTPVTRIL--TSGGAVAGVETTAGT-ITTGTVVVAANAWTPQLLPDLPQGALV----- 232
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
P +G +LV + + HP N + T T G
Sbjct: 233 --PARGQILVTQPVPP-----------------VLPHPFGTNFDKEYG-RQTPT----GQ 268
Query: 379 LVLGSSRQF---AGFNTEVEQT---IIDRIWKRAAEFYPKLRDLCLADFISNRKVR--IG 430
++ G R+ G EQT ++ I + +P+L L R VR G
Sbjct: 269 ILCGGFRRLDENEGLGLYAEQTTPPVLGGIARCLTSLFPRLGPL--------RVVRAWAG 320
Query: 431 LRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+ + DG P+IGP +++A G G G S A+ T + +A +++ D PF
Sbjct: 321 IMGFTADGLPLIGPYGDTKGLYVAAGFNGGGFSWAVATGKALAQLIVQGISAFDLTPF 378
>gi|345864331|ref|ZP_08816533.1| glycine oxidase ThiO [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345124527|gb|EGW54405.1| glycine oxidase ThiO [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 362
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
+T L+ N G+++ V+ + S++ +++ AG WS L+ E + ++P K
Sbjct: 170 ITELISHN--GKIQGVRVGTTKIESER-VIICAGAWSQKLL------AETAIPPAIEPVK 220
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
G +++L+ +PG+VN +L + G +++GS
Sbjct: 221 GQMILLKT-----------------------NPGRVNR-ILLHNQRYLIPRLDGRVLVGS 256
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
+ + GF+ + + A + YP L D + + GLRP P G P IG
Sbjct: 257 TLEHKGFDKTTTTETQKELRQFACDHYPALADAPVEHHWA------GLRPGSPQGIPFIG 310
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
PVPG+ ++L GH G+ L +A L+AD+VL +D AP+A+
Sbjct: 311 PVPGMEGLYLNAGHYRNGVVLGPASARLMADLVLQREPILDPAPYAL 357
>gi|422631439|ref|ZP_16696625.1| FAD dependent oxidoreductase [Pseudomonas syringae pv. pisi str.
1704B]
gi|330941216|gb|EGH44082.1| FAD dependent oxidoreductase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 367
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
+ VQT + + +++AAG WSG L+ L LD+PV+P KG +++ + +
Sbjct: 184 ISGVQTPAGDITGDQ-VILAAGAWSGELLKTL------GLDLPVEPVKGQMILYKCASDF 236
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+SM +L+ A G++++GS+ + GF+
Sbjct: 237 L---SSM---------------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKTTT 272
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
Q ++ + A E P L A+ ++ GLRP P+G P IGP+ G ++L
Sbjct: 273 QAALESLKASAVELLPPLAH---AEPVAQWA---GLRPGSPEGIPFIGPLEGFDGLWLNC 326
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L+ D++L +D AP+A GR
Sbjct: 327 GHYRNGLVLAPASCQLITDLLLEREPIIDPAPYAPTGR 364
>gi|314935603|ref|ZP_07842955.1| putative glycine oxidase [Staphylococcus hominis subsp. hominis
C80]
gi|313656168|gb|EFS19908.1| putative glycine oxidase [Staphylococcus hominis subsp. hominis
C80]
Length = 371
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 129/257 (50%), Gaps = 34/257 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IARQ L S L +A++D+ VP A+ G + + T ++++
Sbjct: 3 DVLIIGSGVIGMSIARQ-LSQSHLDIALIDRDVPGKHASYKAGGMLGAQNEFTEDTDLFR 61
Query: 142 LALRSNKLWKMLADSLR-DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LAL S L+ L L + G+D I ++ +G + + PE++ L+++ + L
Sbjct: 62 LALESRSLFPQLCQDLEAETGID----IQFQNSGLIKVANRPEDVESLEKQYQFLSG--- 114
Query: 201 RAEYLSSSDLLQAEPEL------MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKG 254
L SS ++ ++ EL V A ++P D Q++A + K +
Sbjct: 115 ----LDSSVIVLSDEELTHLTNGTVTSSEMAIYIPQDGQINA----NHYTKALFTSLKQR 166
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
+ + + V + R N ++E TS+ TL SKK ++VAAG W+ L+ T+
Sbjct: 167 QIKRYVNTEVQSVHRQNGYYDIE---TSQGTLQSKK-VIVAAGAWTSKLL------TQYS 216
Query: 315 LDIPVKPRKGHLLVLEN 331
L V KG +L++EN
Sbjct: 217 LPRDVVGVKGEVLLIEN 233
>gi|384048854|ref|YP_005496871.1| oxidoreductase, FAD-binding [Bacillus megaterium WSH-002]
gi|345446545|gb|AEN91562.1| Oxidoreductase, FAD-binding, putative [Bacillus megaterium WSH-002]
Length = 375
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 170/399 (42%), Gaps = 53/399 (13%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDK-VVPCSGATGAGQGYIWMVHRTPGSEIW 140
+DV+++G GII +IA L SVA++++ + C ++ A +
Sbjct: 5 YDVLLVGGGIISSSIAYH-LSKQGASVAILERNQIGCEASSAAAGILGAQAEIDEEGPLL 63
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
DLA++S ++ L L+++ +++I Q G L + T E+ +LK++ Q +
Sbjct: 64 DLAIKSRSMFPELVKELKEKTAIDVELI---QKGLLKVAVTEEDAHVLKKKADQHHQWDK 120
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQL-DAMLAVAYIEKGNRHFASKGRYAE 258
++ + EP L D A +P D QL A L A H A Y +
Sbjct: 121 DVRWIDVKEARLLEPGL--SPDIYGAITIPGDGQLAPAKLTHALAHGALYHGADVFEYCD 178
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
V L+ N T V+ VQTSK + Y +K +V+AAG W+ + +E +
Sbjct: 179 -----VHSLITENET--VKGVQTSKGSFYGEK-VVIAAGSWAKRFI-----SSEHLGQ-- 223
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
V P KG + L++ L ++ G+ L G G
Sbjct: 224 VFPVKGECIALQSHKPLLSKTIFLDEGFY----LVPKAG-------------------GR 260
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+V+G+++ F V I + +AA P +++ K GLRP DG
Sbjct: 261 IVIGATKLQHDFTKTVSAQGIQFLLDKAAVLLPAIKEATF------EKAWAGLRPQTNDG 314
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
P +G P ++ + +A GH G+ L+ T +++AD ++
Sbjct: 315 WPYLGEHPEIANLHMAFGHYRNGILLSAATGKIMADALV 353
>gi|422666970|ref|ZP_16726836.1| FAD dependent oxidoreductase [Pseudomonas syringae pv. aptata str.
DSM 50252]
gi|330977502|gb|EGH77448.1| FAD dependent oxidoreductase [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 367
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
+ VQT + + +++AAG WSG L+ L LD+PV+P KG +++ + +
Sbjct: 184 ISGVQTPAGDITGDQ-VILAAGAWSGELLKTL------GLDLPVEPVKGQMILYKCASDF 236
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+SM +L+ A G++++GS+ + GF+
Sbjct: 237 L---SSM---------------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKTTT 272
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
Q ++ + A E P L A+ ++ GLRP P+G P IGP+ G ++L
Sbjct: 273 QAALESLKASAVELLPPLAH---AEPVAQWA---GLRPGSPEGIPFIGPLEGFDGLWLNC 326
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L+ D++L +D AP+A GR
Sbjct: 327 GHYRNGLVLAPASCQLITDLLLEREPIIDPAPYAPTGR 364
>gi|383643135|ref|ZP_09955541.1| glycine oxidase [Streptomyces chartreusis NRRL 12338]
Length = 389
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 183/418 (43%), Gaps = 52/418 (12%)
Query: 77 SRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG 136
SR T DV+++G GIIGL A + L+ AVVD P GA G + V
Sbjct: 2 SRTRTSDVLVVGGGIIGLVTAWR-AAQRGLATAVVDP-EPGGGAAQVAAGMLAAVTELHY 59
Query: 137 SE--IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
E + L L S + + A L +Q G D +G+++ G+L + ++ L+E
Sbjct: 60 GEQTLLGLNLASARRYPDFAAELTEQTGHD----LGYRRCGTLAVALDADDRAHLRELHA 115
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDA-MLAVAYIEKGNRHFA 251
++GL +++LS + + EP L G R + D Q+D LA A + R
Sbjct: 116 LQQQSGLESQWLSGRECRRLEPMLAPG--VRGGLRVDGDHQIDPRRLAGALVAACERTGV 173
Query: 252 SKGR-YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRE 310
R +AE ++R +TG V T T +V+A G SG L
Sbjct: 174 VFHRAWAERL-----TVVRDRATGAV----TDDGTPLDAGQVVLAGGSLSGRLAG----V 220
Query: 311 TEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMT 370
E VL PV+P KG ++ L ++ H S + V V + +
Sbjct: 221 PEDVLP-PVRPVKGQVVRL----TMPQRHGSFLSRTV--------RAVVRGSHVYLVPRE 267
Query: 371 ATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIG 430
+ G LV+G++ + G++T V + + + A E P + +L L + R G
Sbjct: 268 S-----GELVIGATSEELGWDTTVTAGGVYELLRDAHELVPGITELPLTE------TRAG 316
Query: 431 LRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
LRP PD P++GP GL + LATGH G+ L T + +A ++ T L ++ PF
Sbjct: 317 LRPGSPDNAPLLGPT-GLEGLSLATGHYRNGVLLTPVTGDAMAHVLTTGELPEEARPF 373
>gi|345877274|ref|ZP_08829027.1| glycine oxidase thio [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344225741|gb|EGV52091.1| glycine oxidase thio [endosymbiont of Riftia pachyptila (vent
Ph05)]
Length = 367
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
+T L+ N G+++ V+ + S++ +++ AG WS L+ E + ++P K
Sbjct: 175 ITELISHN--GKIQGVRVGTTKIESER-VIICAGAWSQKLL------AETAIPPAIEPVK 225
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
G +++L+ +PG+VN +L + G +++GS
Sbjct: 226 GQMILLKT-----------------------NPGRVNR-ILLHNQRYLIPRLDGRVLVGS 261
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
+ + GF+ + + A + YP L D + + GLRP P G P IG
Sbjct: 262 TLEHKGFDKTTTTETQKELRQFACDHYPALADAPVEHHWA------GLRPGSPQGIPFIG 315
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
PVPG+ ++L GH G+ L +A L+AD+VL +D AP+A+
Sbjct: 316 PVPGMEGLYLNAGHYRNGVVLGPASARLMADLVLQREPILDPAPYAL 362
>gi|389681789|ref|ZP_10173133.1| glycine oxidase ThiO [Pseudomonas chlororaphis O6]
gi|388554324|gb|EIM17573.1| glycine oxidase ThiO [Pseudomonas chlororaphis O6]
Length = 366
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 45/236 (19%)
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H V+ +R V VQTS + + +V+AAG WSG L+ L L +PV+
Sbjct: 172 HCEVSGFIREGE--RVLGVQTSLGEIRGDQ-VVLAAGAWSGELLKSL------GLALPVE 222
Query: 321 PRKGHLLVLE---NFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
P KG +++ + +F S +L+ A G
Sbjct: 223 PVKGQMILYKCASDFLSC---------------------------MVLAKGRYAIPRRDG 255
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
++++GS+ + GF+ + ++ + A E P L A+ + + GLRP P+
Sbjct: 256 HILIGSTLEHEGFDKTPTASALESLKASAIELIPALAQ---AEVVGHWA---GLRPGSPE 309
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
G P IGPVPGL ++L GH GL LA + +L D++L +D AP+A GR
Sbjct: 310 GIPYIGPVPGLEGLWLNCGHYRNGLVLAPASCQLFTDLMLGREPIIDPAPYAPSGR 365
>gi|409990301|ref|ZP_11273695.1| glycine oxidase ThiO [Arthrospira platensis str. Paraca]
gi|409938839|gb|EKN80109.1| glycine oxidase ThiO [Arthrospira platensis str. Paraca]
Length = 367
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 161/392 (41%), Gaps = 75/392 (19%)
Query: 106 LSVAVVDK-----VVPCSGATGAGQGYIW------MVHRTPGSEIWDLALRSNKLWKMLA 154
LSVA+ + V CS T GY+ R P S + DLALRS L++
Sbjct: 21 LSVAIALQWRGATVTVCSRNTQEAAGYVAAGMLAPQAERIPPSPLLDLALRSRSLYQPWT 80
Query: 155 DSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQA 213
++ GLD G+ G L P + ++ Q E+ A +L + L+
Sbjct: 81 SKIQHLTGLD----TGYWPCGIL----APVYEYPQQTQLPQTPES--PAIWLEADQLITQ 130
Query: 214 EPELMVGEDSRAAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNS 272
+P L E + P D Q+D L + + ++ + R D V + +
Sbjct: 131 QPGLS-SEVVGGWWFPQDGQVDNRRLLMRSLIHASQQLGIQIR------DGVEVQEIATT 183
Query: 273 TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVL--- 329
T +V+ + T++ + I+ AAG WSG +L IPV P KG +L L
Sbjct: 184 TNKVKQINTNQGAIVGSHYIL-AAGSWSGQ-----------ILPIPVYPIKGQMLSLRVP 231
Query: 330 ENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAG 389
+ + L L +G I + D G +VLG++ + G
Sbjct: 232 DYISELPLKQVLFGSG---------------------IYIVPRRD--GLIVLGATAENVG 268
Query: 390 FNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLS 449
F+ + I+ + A YP L + + +F S G RP PD P++G P
Sbjct: 269 FHKSLTPKGINTLLSEATRLYPGLAEFPIEEFWS------GFRPTTPDELPILGRSP-FE 321
Query: 450 KVFLATGHEGLGLSLALGTAELVADMVLTNPL 481
+ LATGH G+ LA TAEL+AD+V + L
Sbjct: 322 NLTLATGHHRNGILLAPITAELIADLVCYDKL 353
>gi|426402320|ref|YP_007021291.1| D-amino acid dehydrogenase [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425858988|gb|AFY00024.1| D-amino acid dehydrogenase [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 415
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 178/449 (39%), Gaps = 112/449 (24%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLS-----VAVVDKVVPCSGATGAGQGYIW----MVHR 133
D++++GAGIIG + VG++LS V V+DK G + G++ M
Sbjct: 7 DILVVGAGIIGAS------VGAELSRRGAKVCVIDKGTVGKGCSYGNAGWMTPCFAMPLP 60
Query: 134 TPGSEI----W----------------DLALRSNKLWKMLADSLRDQGLDPLQVIGWK-- 171
PG I W DLA K + + + +D L V+ K
Sbjct: 61 MPGMLIKSMKWLLNPEGPLYIKPSLSLDLATWMYHFMKNMNATQARRAVDALVVLSQKSL 120
Query: 172 ----------------QTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP 215
Q G +++ RT + E ++ + + G+ + L+ D+ Q EP
Sbjct: 121 TEYEKLGRLYPETRFQQKGLMMVSRTQAGVAAAVEELEYVKDIGVTGKILNGDDIQQMEP 180
Query: 216 ELM------VGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLR 269
L V D A PY L V + K R G E C L+
Sbjct: 181 ALKAPLLGGVYFDKEAMAEPY-------LVVQALAKEIRQHG--GEILE------NCELQ 225
Query: 270 SN--STGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLL 327
S +E+V+TS+ T+ +K+ IV+A G WS S M ++R L +P+ KG+ +
Sbjct: 226 DMEISGNRIESVKTSQGTIRAKQ-IVMATGSWSKS-MAKMMR-----LRVPILGGKGYAM 278
Query: 328 VLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQF 387
++ Q + +L A T L + + +
Sbjct: 279 IVPTLEK-----------------------QPQYPIMLVEKKIAITPRENTLRIAGTLEL 315
Query: 388 AGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPG 447
+ + Q ++ I K A EF L L D + +++ GLRP PDG P+IG
Sbjct: 316 VDQDFTITQRRVESIKKGAKEF------LHLPDDLQVQELWAGLRPCTPDGVPLIGYHQN 369
Query: 448 LSKVFLATGHEGLGLSLALGTAELVADMV 476
L+ + LA GH+ LGL GT LVAD+V
Sbjct: 370 LNNLVLAVGHQMLGLQSGAGTGLLVADLV 398
>gi|269838328|ref|YP_003320556.1| FAD dependent oxidoreductase [Sphaerobacter thermophilus DSM 20745]
gi|269787591|gb|ACZ39734.1| FAD dependent oxidoreductase [Sphaerobacter thermophilus DSM 20745]
Length = 377
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 171/405 (42%), Gaps = 54/405 (13%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR--TPGS 137
+V I+G GIIG IA +L VAVV++ A+GA G I TP
Sbjct: 7 EAVEVAIVGGGIIGCAIAYEL-ARKGHRVAVVERGAIGGEASGASAGIIAPPSNKDTPAV 65
Query: 138 EIWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+ +L RS + L +L+D+ G D +G++Q G+LL+ + L+ +
Sbjct: 66 RV-ELTARSLSAYPWLVAALQDETGFD----VGYRQWGALLVASNENDHARLRALLSWQE 120
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRY 256
+ G +E++ ++L EP L E L D+ + V + + A++
Sbjct: 121 DLGFDSEWVEPAELRHLEPALP--EGLLGGMLANDA---GSVNVRRLTRALAAAAARRGA 175
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
H P + S V+ + TL + + +V+AAG W+ +L +
Sbjct: 176 LVLEHTPALGVATSGDL--ATGVRLADGTLPAAQ-VVLAAGAWTARFGLELGQA------ 226
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
+P P KG +L L LHP + G + T +
Sbjct: 227 LPTVPVKGQMLALGGL---------------------LHPPRTIIGGAGGYLVPWTDGTV 265
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
G + ++ + AGF+T V + + P L D + ++ GLRP P
Sbjct: 266 G---VAATEEEAGFDTRVTPAGLRALVGLIEALAPGLLD---GEVVATWA---GLRPGTP 316
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAE-LVADMVLTNP 480
D +P++G VPG +++A+GH G+ LA+GTAE LVA ++ P
Sbjct: 317 DREPIVGLVPGYDNLWVASGHFRTGVQLAIGTAEVLVASLLSGAP 361
>gi|86609170|ref|YP_477932.1| oxidoreductase, FAD-binding [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557712|gb|ABD02669.1| oxidoreductase, FAD-binding [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 365
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 185/410 (45%), Gaps = 55/410 (13%)
Query: 86 IIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-YIWMVHRTPGSEIWDLAL 144
+IG G++G IA +L + LSV +D P +G+TGA G + + R G E L L
Sbjct: 1 MIGCGVVGCAIAYEL-SAAGLSVVGIDAGDPAAGSTGAALGVLVGISSRQAGGETVQLRL 59
Query: 145 RSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEY 204
+S +L+ L L + D + + + G L + R EE+ +E + +AG R +
Sbjct: 60 KSLELFDPLIARLEE---DLGRSLPVNRRGILKLLRE-EEVEAWQETLVARRQAGYRLDL 115
Query: 205 LSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKG-RYAEFYHD 262
LS +++ +P L + + A + P D Q+ +L A +E R KG R+ F+H
Sbjct: 116 LSLAEVGSLQPGLR-SDLAAAIYSPQDRQVQPKLLTQALLEAAQR----KGSRF--FFHQ 168
Query: 263 PVTCLLRSNSTG-EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
PV + RS+ ++ V T TL S +++AAG S L E+ L +P++
Sbjct: 169 PVQKIQRSSDPPFRLQTVYTPALTL-SAGHVILAAGLGSSPLAK------ELGLQVPLQA 221
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVL 381
KG +L++ + G V D LH + D G+L +
Sbjct: 222 VKGQ--------ALRVKAPGIPLGPV-VTDADLH-------------LVPLGD--GSLWV 257
Query: 382 GSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR-IGLRPYMPDGKP 440
G++ +F + E + + RA P L L D + + R +G R P
Sbjct: 258 GATVEFQAPHPEPTLLALQDLLARAIRLCPALAAATLLDHWAGHRPRPVGQR------AP 311
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKV-DSAPFA 489
++G PG + + +ATGH G+ LA +A ++ D+VL + D PFA
Sbjct: 312 ILGWAPGYANLLIATGHYRNGVLLAPISAAILRDLVLKGETALCDLGPFA 361
>gi|319891344|ref|YP_004148219.1| glycine oxidase ThiO [Staphylococcus pseudintermedius HKU10-03]
gi|317161040|gb|ADV04583.1| Glycine oxidase ThiO [Staphylococcus pseudintermedius HKU10-03]
Length = 368
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 168/400 (42%), Gaps = 62/400 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI----WMVHRTPGSEI 139
+IIGAG++GL+IARQ L + ++D+ P A+ A G + TP +
Sbjct: 4 TLIIGAGVMGLSIARQ-LNSKHRHIRIIDRSTPRMNASYAAGGMLGAQNEFFEDTP---L 59
Query: 140 WDLALRSNKLWKMLADSL-RDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA 198
+ LA++S + LA +L R+ G+ I ++Q G + + P+++ + ++ + L
Sbjct: 60 YRLAMKSRAMMPELAQALERETGVH----IEYQQHGLIKVASQPQDVQAVHQQYEFLHHH 115
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
LS+ L Q P L AAF + D Q++A L Y + +
Sbjct: 116 DHTVTQLSTEQLTQRFPHL--DPSQSAAFKIQDDGQINANL---YTQALIASVMQRSHIE 170
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
H V L + VE TSK T + +++AAG WSG+L+ L ++
Sbjct: 171 LMTHTEVYSLQHLHYCYRVE---TSKGT-FEADELIIAAGAWSGALLQQL------GFEL 220
Query: 318 PVKPRKGHL-LVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
P P KG + L+ ++ LK +M Y+ +
Sbjct: 221 PTHPVKGDVKLIASDYAGLKETIFNMNGCYI------------------------VPKLP 256
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
++G++ + ++TE + + + P LR + K G+RP
Sbjct: 257 NRFLIGATSDYDCWDTENNDDNLAWLDHESVNMIPALRSHHVI------KTWTGIRPITE 310
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
D P++G + ++F+ TGH G+ L+ +L+A +V
Sbjct: 311 DEIPIMGEIA--PQLFVTTGHYRNGILLSPIAGQLMAQLV 348
>gi|262192477|ref|ZP_06050628.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae CT
5369-93]
gi|262031636|gb|EEY50223.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae CT
5369-93]
Length = 420
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLAAIEKDMQLLAQSGVRFELLNVAQCLIHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ N + ++ VQT L
Sbjct: 193 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVNESKKIIGVQTDLG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L +DIPV P KG+ L L
Sbjct: 244 LKADAYVVALGSYSTSLLKPL------GIDIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T D I + + + AGF+ + + I
Sbjct: 284 ----DEEFAPQSTVMDETYKVALTRFADRIR---VAGTAELAGFDPAIPEARKATIEMVV 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P+ D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPRGGDFAQGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMVLTN 479
G+A ++ D VLT+
Sbjct: 390 GSASILTD-VLTH 401
>gi|398857364|ref|ZP_10613064.1| glycine oxidase ThiO [Pseudomonas sp. GM79]
gi|398240955|gb|EJN26618.1| glycine oxidase ThiO [Pseudomonas sp. GM79]
Length = 366
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V VQTS + + +V+ AG WSG L+ L L++PV+P KG +++
Sbjct: 185 VVGVQTSMGAIAGDQ-VVLTAGAWSGDLLKSL------GLELPVEPVKGQMIL------- 230
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + GF+
Sbjct: 231 ----------YKCAADFL-------PSMVLAKGRYAIPRRDGHILIGSTLEHEGFDKTPT 273
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
T ++ + A E P L D A+ + + GLRP P+G P IG VPG ++L
Sbjct: 274 DTALESLKASAVELIPALAD---AEVVGHWA---GLRPGSPEGIPYIGRVPGFDGLWLNC 327
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D AP+A GR
Sbjct: 328 GHYRNGLVLAPASCQLFADVMLGRAPIIDPAPYAPAGR 365
>gi|395650251|ref|ZP_10438101.1| putative oxidoreductase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 391
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V T+ ++ + +V+AAG WSG L+ L L +PV+P KG +++ +
Sbjct: 207 VVGVNTADGAIFGDQ-VVLAAGAWSGELLGTL------GLSLPVEPVKGQMILYK----- 254
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
PG ++ +L+ A G++++GS+ + GF+
Sbjct: 255 ------------------CAPGFLSS-MVLAKGRYAIPRRDGHILVGSTLEHEGFDKTPT 295
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
QT ++ + A E P L A+ + + GLRP P+G P IG VPG ++L
Sbjct: 296 QTALESLKASAVELIPALAG---AEVVGHWA---GLRPGSPEGIPYIGQVPGFEGLWLNC 349
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D P+A GR
Sbjct: 350 GHYRNGLVLAPASCQLFADLLLGRAPIIDPTPYAPAGR 387
>gi|424070599|ref|ZP_17808033.1| FAD-binding oxidoreductase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|408000297|gb|EKG40658.1| FAD-binding oxidoreductase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 367
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 180/431 (41%), Gaps = 93/431 (21%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSE 138
V+I+G+G+IGL A L +SV ++D+ ++ AG G Y W +P
Sbjct: 6 VVIVGSGVIGLLTAFNL-ASEQVSVVLLDRSGVGQESSWAGGGIVSPLYPW--RYSPA-- 60
Query: 139 IWDLALRSNKLWKMLADSLRDQ-GLDP---------------LQVIGWKQTGSLLIGRTP 182
+ LA S + LA+ L Q G+DP + W L + R
Sbjct: 61 VTALAHWSQDFYPHLAERLLAQTGIDPEVHKTGLYWLDLDDEQSALEWAVREKLSLNRV- 119
Query: 183 EELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAY 242
++ + + V L E RA Y++ ++ P L+ + +AA L AM V
Sbjct: 120 -DISAVNDAVPVLGEGYSRAIYMADVANVR-NPRLV--KSLKAALL-------AMPNVEI 168
Query: 243 IEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGS 302
E+ V+ R S + VQT + + +++AAG WSG
Sbjct: 169 REQCE----------------VSGFTREGS--RISGVQTPAGDITGDR-VILAAGAWSGE 209
Query: 303 LMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHG 362
L+ L L++PV+P KG +++ + + +SM
Sbjct: 210 LLKTL------GLELPVEPVKGQMILYKCASDFL---SSM-------------------- 240
Query: 363 QILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFI 422
+L+ A G++++GS+ + GF+ Q ++ + A E P L A+ +
Sbjct: 241 -VLAKGRYAIPRRDGHILIGSTLEHEGFDKTTTQAALESLKASAVELLPPLAH---AEPV 296
Query: 423 SNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLK 482
+ GLRP P+G P IGP+ G ++L GH GL LA + +L+ D++L
Sbjct: 297 AQWA---GLRPGSPEGIPFIGPLDGFDGLWLNCGHYRNGLVLAPASCQLITDLLLEREPI 353
Query: 483 VDSAPFAVQGR 493
+D AP+A GR
Sbjct: 354 IDPAPYAPTGR 364
>gi|440231139|ref|YP_007344932.1| glycine/D-amino acid oxidase, deaminating [Serratia marcescens
FGI94]
gi|440052844|gb|AGB82747.1| glycine/D-amino acid oxidase, deaminating [Serratia marcescens
FGI94]
Length = 434
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 131/308 (42%), Gaps = 44/308 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL--MVGEDSRAAFL 228
+Q G+L + R+ ++ + + L +AG+ + L SS L AEP L + + + L
Sbjct: 133 RQRGTLQLFRSQQQFENAAKDIAVLEDAGVPYKLLESSQLATAEPALAQVAHKLTGGLQL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + K A + Y V LL ++ VQ TL +
Sbjct: 193 PNDETGDCQLFTQRLAK----MAEQAGVTFLYDQHVDRLLVDGD--KITGVQCGGQTL-T 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
+ VVA G +S +L+ L+ IPV P KG+ L + + ++++
Sbjct: 246 ADSYVVAFGSYSTALLRGLV-------SIPVYPLKGYSLTIPITDEAAAPYSTV------ 292
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
+ A T + +G + GFNTE+EQ + + +
Sbjct: 293 ---------------LDETYKVAITRFDQRIRVGGMAEIVGFNTELEQKRRETLEMVVRD 337
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
YP + A F + GLRP PDG P++G L ++L TGH LG ++A G+
Sbjct: 338 LYPNGGQVEQATFWT------GLRPMTPDGTPIVGRT-SLKNLYLNTGHGTLGWTMACGS 390
Query: 469 AELVADMV 476
+L+AD++
Sbjct: 391 GQLLADLI 398
>gi|398844023|ref|ZP_10601133.1| glycine oxidase ThiO [Pseudomonas sp. GM84]
gi|398254992|gb|EJN40039.1| glycine oxidase ThiO [Pseudomonas sp. GM84]
Length = 365
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 37/220 (16%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
G V VQT ++ L + +V++AG WSG DLLR + L++PV+P KG +++ F
Sbjct: 181 GRVTGVQTEESVLQADD-VVLSAGAWSG----DLLRT--LGLELPVEPVKGQMIL---FK 230
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
+ SM +L+ A G++++GS+ + AG++
Sbjct: 231 CAEDFLPSM---------------------VLAKGRYAIPRRDGHILVGSTLEHAGYDKT 269
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ + + A E P+L +A+ + + GLRP P+G P IG VPG ++L
Sbjct: 270 PTEEALASLKASAIELLPELE---VAEVVGHWA---GLRPGSPEGVPYIGRVPGHDGLWL 323
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++ +D AP+A +GR
Sbjct: 324 NCGHYRNGLVLAPASCQLFADLLTGVEPIIDPAPYAPEGR 363
>gi|339000208|ref|ZP_08638825.1| glycine oxidase ThiO [Halomonas sp. TD01]
gi|338762904|gb|EGP17919.1| glycine oxidase ThiO [Halomonas sp. TD01]
Length = 395
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 176/420 (41%), Gaps = 79/420 (18%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGS 137
+ +IIG G+IG+ A QL + V VV++ + ++ AG G Y W + P S
Sbjct: 24 NFLIIGGGVIGMMTALQL-ADAGQQVTVVERGICGQESSWAGGGIVSPLYPWR-YAPPIS 81
Query: 138 EIWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVM--LKERVKQ 194
+ L+ S ++ L+ L ++ G+DP ++Q G L + E + +E K
Sbjct: 82 Q---LSRWSEGVYPTLSLRLLEETGIDP----EYRQKGLLYLNVDDAETALGWARELAKP 134
Query: 195 LCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLP-----YDSQLDAMLAVAYIEKGNRH 249
L E +++ + Q EP + +DS A ++P + +L L + N
Sbjct: 135 L-------ERVNAEFVHQKEPMVAAAQDS-ALWMPTLGSVRNPRLGQALRARLLAMPNVE 186
Query: 250 FASKGRYAEFY-HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLL 308
+ F HD +V V T++ L ++K +VV G W+ L+ L
Sbjct: 187 LNEGCEVSRFITHD-----------QQVLGVATAQGELRAEK-VVVCGGAWTAKLLASL- 233
Query: 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSIS 368
+ +PV+P KG ++ + L + Y+
Sbjct: 234 -----TIRLPVRPVKGQMIAYQAPPGLVQRVVLKDGRYI--------------------- 267
Query: 369 MTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR 428
+D G L++GS+ + AGF+ + + + + A P L D +A +
Sbjct: 268 -IPRSD--GLLLVGSTLEEAGFDKTTDSEALASLKQTAESIVPALADYPVAYHWA----- 319
Query: 429 IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
GLRP PDG P IG +PG S V++ GH GL LA + ++ D +L +D APF
Sbjct: 320 -GLRPGSPDGIPFIGALPGWSDVYVNAGHYRNGLVLAPASTHVLVDQLLGREPLIDPAPF 378
>gi|262274838|ref|ZP_06052649.1| D-amino acid dehydrogenase small subunit [Grimontia hollisae CIP
101886]
gi|262221401|gb|EEY72715.1| D-amino acid dehydrogenase small subunit [Grimontia hollisae CIP
101886]
Length = 417
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 127/311 (40%), Gaps = 43/311 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L I R ++L +++ + L ++G R + ++ D ++ EP L +L
Sbjct: 133 RQKGTLQIFRNEKQLDAVEKDIALLEQSGTRYQRMTVEDCIKQEPGLAAVSHKLTGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + + +K F D ++ T + +V T K L
Sbjct: 193 PDDETGDCYLFCQQMTE-----LAKAHGVTFMFDTEVKNVKREGT-RIVSVVTDKGEL-E 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S M DL L IPV P KG+ L V
Sbjct: 246 ADAYVVAMGSYSTRFMADL------GLSIPVYPVKGYSLT------------------VP 281
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D T P + +++T D I + + + AGF+ + + I +
Sbjct: 282 ITDETQAPTSTVMDETYKVALTRFDDRI---RVAGTAELAGFDPSIPEKRKATISMVVKD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P D A+F + G RP PDG P+IG P S +F TGH LG ++A G+
Sbjct: 339 LFPNSGDFDKAEFWT------GFRPMTPDGTPLIGKTP-FSNLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTN 479
L+A ++ N
Sbjct: 392 GHLLAQIIGNN 402
>gi|347759502|ref|YP_004867063.1| D-amino acid dehydrogenase small subunit [Gluconacetobacter xylinus
NBRC 3288]
gi|347578472|dbj|BAK82693.1| D-amino acid dehydrogenase small subunit [Gluconacetobacter xylinus
NBRC 3288]
Length = 418
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 171/440 (38%), Gaps = 90/440 (20%)
Query: 84 VIIIGAGIIGLTIA--------------RQLLVGSDLSVAVVDKVVPCSGATGAGQGY-- 127
+I++G+G++G+T A RQ G + S A +V P + AG G
Sbjct: 3 IIVLGSGVVGVTSAWYLAQAGHEVTVVDRQPEAGLETSFANAGQVSPGYSSPWAGPGVPF 62
Query: 128 ---IWMVHRTPGSEIWDLALRSNKLWKMLA--------------------------DSLR 158
W++ + W + LWK L D +R
Sbjct: 63 KAVKWLMMKYRPFVFWPMP--DPHLWKWLVQMLENCNTSAYDRNKGRMVRIAEYSRDVMR 120
Query: 159 DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELM 218
D +Q G+L + RT +++ + ++ L + G+ E L + ++AEP L
Sbjct: 121 DLRASTGITYDDRQQGTLQLFRTQKQMDGIAGDIRVLEQYGVPYELLDRGECVKAEPGLG 180
Query: 219 VGEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
LP D DA L R A +H + + G +
Sbjct: 181 ASAHKIVGGLRLPGDETGDAFLFT------QRLAAKAAEAGVTFHYDTSIRTMTAEGGRI 234
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
++TS+ + + + VV+ G +S +++ L LD+P+ P KG+ L + N +
Sbjct: 235 TGIETSRGQMVAD-SYVVSLGSYSPAMVRKL------GLDLPIYPVKGYSLTADIINEKQ 287
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
+++ D T G G + I TA + AGF+T +
Sbjct: 288 APVSTI-------MDETFKIGITRLGNRIRIGGTA--------------ELAGFSTTLRA 326
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + +P D+ A F + GLRP PDG P+IG +FL TG
Sbjct: 327 PRRETLEHSVTDLFPGGGDIAGAKFWT------GLRPMTPDGTPIIGRTR-YDNLFLNTG 379
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG ++A G+ +++AD++
Sbjct: 380 HGTLGWTMACGSGKVLADIM 399
>gi|347755033|ref|YP_004862597.1| glycine oxidase ThiO [Candidatus Chloracidobacterium thermophilum
B]
gi|347587551|gb|AEP12081.1| glycine oxidase ThiO [Candidatus Chloracidobacterium thermophilum
B]
Length = 384
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 174/421 (41%), Gaps = 68/421 (16%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDK-VVPCSGATGAGQGYIWMVHRTPGSE 138
T D I+IG G+IGL IAR L L V V ++ P A+ A G + P +E
Sbjct: 3 QTCDAIVIGGGVIGLAIARAL-ARDGLRVTVFERNARPGGEASWAAAGML-----APQAE 56
Query: 139 ------IWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERV 192
++DL L+S L+ A +L ++ +++ G+LL+ PE++ L ++
Sbjct: 57 ADAPGPLFDLCLKSRSLYTDFAAALWEETRIDIELC---PAGTLLVASQPEDVAALHAKL 113
Query: 193 KQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS 252
AG AE+LS SD+ EP + A +LP D Q++ R +
Sbjct: 114 DWQTAAGCHAEWLSPSDVQNLEPLV---RSHGALYLPDDWQVE----------NRRLTQA 160
Query: 253 KGRYAEFYHDPVTC----LLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLL 308
P+ C L G V V+ ++ +S ++ AAG W+ + +LL
Sbjct: 161 LIAAVAAAQVPIHCHSDGLTLCLEKGRVVGVEV-RDERWSAPVVINAAGSWAAQMSANLL 219
Query: 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSIS 368
V ++P +G ++ L+ SL+L H + Q+ +
Sbjct: 220 GLPARV----IRPIRGQMVALQMPVSLRLRHV------------------IRTSQVYLVP 257
Query: 369 MTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR 428
L++G++ + G+ V + + A P L L + +
Sbjct: 258 RRDQ-----RLIIGATVEDVGYEKAVTAGGVCSLLSGALATAPPLAAASLIETWA----- 307
Query: 429 IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
GLRP D P+IG L+ ++ ATGH G+ L TAE++ +V P + APF
Sbjct: 308 -GLRPLAIDHLPLIGET-ALAGLWCATGHYRNGVLLTPITAEIIRCLVQQLPPPCEMAPF 365
Query: 489 A 489
+
Sbjct: 366 S 366
>gi|170751204|ref|YP_001757464.1| D-amino-acid dehydrogenase [Methylobacterium radiotolerans JCM
2831]
gi|226722384|sp|B1M860.1|DADA_METRJ RecName: Full=D-amino acid dehydrogenase small subunit
gi|170657726|gb|ACB26781.1| D-amino-acid dehydrogenase [Methylobacterium radiotolerans JCM
2831]
Length = 419
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 172/439 (39%), Gaps = 87/439 (19%)
Query: 84 VIIIGAGIIGLTIA--------------RQLLVGSDLSVAVVDKVVPCSGATGAGQG--- 126
V+I+G G++G+T A RQ G + S A +V P A A G
Sbjct: 3 VLILGGGVVGVTSAYYLARAGHQVTVLERQPGAGLETSFANAGQVSPGYSAPWAAPGIPV 62
Query: 127 ----YIWMVHR--------TPGSEIW---------DLALRSNK-----LWKMLADSLRDQ 160
++ M HR P W + A R NK L + D+LRD
Sbjct: 63 KALRWLMMRHRPLVLWPRLEPRLYAWLTRMLANCTEEAYRRNKGRMVRLAEYSRDALRDL 122
Query: 161 GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVG 220
+ ++ G+L + RT ++L + + + L G+ L + + AEP L
Sbjct: 123 RTETGIAYDHREKGTLQLFRTRKQLDHVGDDTRVLDAYGVPYTVLDPAGCIAAEPALAAV 182
Query: 221 EDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGE-VE 277
D LP D DA L + RY T + R + G+ V
Sbjct: 183 RDVFVGGLRLPGDETGDAHLFTQRLAALCESLGVTFRYG-------TAIARLHHAGDRVT 235
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
AV+T+ L A V A G ++ +L+ L + +PV P KG+ SL L
Sbjct: 236 AVETADGALLRADAYVAALGSYTPALLRPL------GIALPVYPVKGY--------SLTL 281
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
EA P + +++T D I +G + + AGF+ +
Sbjct: 282 PITDAEAA----------PVSTVMDETYKVAITRLGDRI---RVGGTAELAGFSNALRGP 328
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+ + + + +P DL A F + GLRP PDG P++G + +F TGH
Sbjct: 329 RRETLARSVQDLFPAGGDLDKASFWT------GLRPMTPDGTPIVGGTR-VGNLFTNTGH 381
Query: 458 EGLGLSLALGTAELVADMV 476
LG ++A G+ L+AD+V
Sbjct: 382 GTLGWTMACGSGRLLADLV 400
>gi|32473614|ref|NP_866608.1| D-amino acid dehydrogenase, small chain [Rhodopirellula baltica SH
1]
gi|32398294|emb|CAD78389.1| D-amino acid dehydrogenase, small chain [Rhodopirellula baltica SH
1]
Length = 456
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 180/458 (39%), Gaps = 108/458 (23%)
Query: 86 IIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IWDLA 143
I+G+GI+G+ A L + L V V+D+ + A GYI H P +E + +A
Sbjct: 49 IVGSGIVGIACA-HYLSEAGLDVTVIDRGTIAGECSHANCGYICPSHALPLTEPGAFSVA 107
Query: 144 LRS---------------NKLWKMLADSLRD-------QGLDPLQVI------------- 168
L+S LWK + + PL I
Sbjct: 108 LKSIFNPRSPFRVKPQISPALWKWMLQFAKRCTHRKMLAAGKPLHAILEASMSEYHSLIE 167
Query: 169 ------GWKQTGSLLIGRTPEELVMLKERVKQLCEA-GLRAEYLSSSDLLQAEPELMVGE 221
WK+ G L + +T + + + + E G+ A + +L + +P L E
Sbjct: 168 RLSLDCEWKEEGLLYVLQTERGMESFAKTDRLVSEEFGIPATRIDGINLPKFDPGLK--E 225
Query: 222 DSRAAFL-PYDSQLDAMLAVAYIEKGNRHFASK--GRYAEFYHDPVTCLLRS--NSTGEV 276
AFL P D+ + +K N +++K R +F C L+S G +
Sbjct: 226 GLAGAFLYPNDTSVRP-------DKLNSQWSAKLQERGVQFIEK---CELKSIRKEAGRI 275
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
A++T++ + V A G WS E+ + +PV+P KG+ + +E K
Sbjct: 276 VAIETNRGD-FKTDYFVFAMGAWSTKW------ESALQCSVPVQPGKGYSVTIE-----K 323
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
H+ A H + + P + G L GS +FAG++T + +
Sbjct: 324 PEHSPNHAILFPEHKVGVSP--FDEG----------------LRFGSMMEFAGYDTSIPR 365
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISN-----RKVRIGLRPYMPDGKPVIGPVPGLSKV 451
I +LRD +++ + G RP D P+IG +P LS
Sbjct: 366 HRIQ-----------QLRDSARPYLVASVDGPAQSQWYGWRPMTWDSLPIIGTLPELSNG 414
Query: 452 FLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
LATGH LGLSLA T L+ +++ +D AP++
Sbjct: 415 LLATGHNMLGLSLAPATGRLIGEIITGQQTHLDPAPYS 452
>gi|225573812|ref|ZP_03782567.1| hypothetical protein RUMHYD_02014 [Blautia hydrogenotrophica DSM
10507]
gi|225038840|gb|EEG49086.1| FAD dependent oxidoreductase [Blautia hydrogenotrophica DSM 10507]
Length = 389
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 172/420 (40%), Gaps = 56/420 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+V +IGAG+IG +A + VA++D + G + + + PG + L
Sbjct: 7 EVAVIGAGVIGSAVAY-YAAKAGFQVALIDAGDSAQFTSSRCDGNVLVSDKMPGYDT-SL 64
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
RS +L L+D L W++ GS+L+ +E+ M ++ + G+
Sbjct: 65 TARSQELLDELSDELDYD-------FQWERRGSMLVMENEQEMEMGQKLCEDFKANGITG 117
Query: 203 EYL-SSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYH 261
++ ++L Q EP L A + +D D L + G K R H
Sbjct: 118 VHMMDPNELAQREPYL---ARDLAGGMWFDG--DGCLYPMGLCYGLAEGLKKYRGELLLH 172
Query: 262 DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAA------GCWSGSLMHDLLRETEIVL 315
PVT + +S G+ + T +++++ + A G SG +
Sbjct: 173 QPVTMVKKS---GKGFVLSTPDYEIWTERVVNCAGIQSARVGAMSG-------------I 216
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYV------GHHDLTLHPGQVNHGQILSISM 369
+IPVKPR+G +LV E L ME GY+ + + +G L
Sbjct: 217 EIPVKPRQGQILVSEPTVQLA-KQKVMEFGYMMAKFQSSDYVRPVTSLMEKYGVALVYEP 275
Query: 370 TATTDVIGNLVLGSSRQFAGF-NTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR 428
T N +LGSSR F + +V+ ++ I R F+P + D+ + +
Sbjct: 276 TGGN----NFLLGSSRYFTDMDDVKVDIEVMKAIALRGIRFFPAMADVKVI------RSY 325
Query: 429 IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G+R Y PD P+I + ++ATGHEG G+ L+ T L+ ++ + D P
Sbjct: 326 AGIRAYTPDHMPIISDTV-VDGYYVATGHEGDGVGLSAITGVLMTQLLSGEVTEFDMEPL 384
>gi|311032523|ref|ZP_07710613.1| glycine oxidase [Bacillus sp. m3-13]
Length = 376
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 171/416 (41%), Gaps = 59/416 (14%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
++DVIIIG G+ G +IA L + + + + + ++ A V T ++
Sbjct: 4 SYDVIIIGGGVNGCSIAYYLACEGNSILLLEREKLAGKASSAAAGMLGAQVEVTEEGALF 63
Query: 141 DLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
D+A S ++ L L++ G+D I Q G L + EE LK + + G
Sbjct: 64 DIAKESRAMFPSLQYELKEHSGID----IELVQKGMLKLAMNEEEARHLKSTIDFQQKLG 119
Query: 200 LRAEYLSSSDLLQAEPEL---MVGEDSRAAFLPYDSQLD-AMLAVAYIEKGNRHFASKGR 255
RAE+L+ + + E +L +VG A +P D ++ L A+ + A
Sbjct: 120 ERAEWLAPEQVKEREGQLSDALVG----AMDIPMDGHVNPERLTHAFAKSAVNLGAEVKE 175
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
Y E Y LL ST ++ V+TS T + + +VVA G WS L+ +E +
Sbjct: 176 YVEVY-----SLLMDGST--IKGVETSNGTFHGEN-VVVATGAWSKRLL------SECGV 221
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
++P P KG + L + E+ Y+
Sbjct: 222 NLPAYPVKGECFSVITDRPLLASTIFTESCYI-------------------------VPK 256
Query: 376 IGN-LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
GN LV+G++ F+ V + ++ K AA+ P LR S G+RP
Sbjct: 257 CGNRLVIGATMIPDTFSENVTVGGLFQLMKEAAKVLPALRSATFERSWS------GIRPQ 310
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
DG P +G P + +ATGH G+ L+ T +LV M+ PL V F +
Sbjct: 311 TGDGLPYLGQHPEFKNLVIATGHYRNGILLSPITGKLVEKMIHGEPLPVYMEAFKL 366
>gi|228474536|ref|ZP_04059267.1| glycine oxidase [Staphylococcus hominis SK119]
gi|228271199|gb|EEK12567.1| glycine oxidase [Staphylococcus hominis SK119]
Length = 371
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 129/257 (50%), Gaps = 34/257 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IARQ L S L +A++D+ VP A+ G + + T ++++
Sbjct: 3 DVLIIGSGVIGMSIARQ-LSQSHLDIALIDRDVPGKHASYKAGGMLGAQNEFTEDTDLFR 61
Query: 142 LALRSNKLWKMLADSLR-DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LAL S L+ L L + G+D I ++ +G + + PE++ L+++ + L
Sbjct: 62 LALESRSLFPQLCQDLEAETGID----IQFQNSGLIKVANRPEDVESLEKQYQFLSG--- 114
Query: 201 RAEYLSSSDLLQAEPEL------MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKG 254
L SS ++ ++ EL V A ++P D Q++A + K +
Sbjct: 115 ----LDSSVIVLSDEELTHLTNGTVTSSEMAIYIPQDGQINA----NHYTKALFTSLKQR 166
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
+ + + V + R N +VE TS+ TL +KK ++VAAG W+ L+ T+
Sbjct: 167 QIKRYVNTEVQSVQRQNGYYDVE---TSQGTLQAKK-VIVAAGAWTSKLL------TQYS 216
Query: 315 LDIPVKPRKGHLLVLEN 331
L V KG +L++EN
Sbjct: 217 LPRDVVGVKGEVLLIEN 233
>gi|305666709|ref|YP_003862996.1| D-amino acid dehydrogenase [Maribacter sp. HTCC2170]
gi|88708933|gb|EAR01167.1| D-amino acid dehydrogenase [Maribacter sp. HTCC2170]
Length = 416
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 159/382 (41%), Gaps = 82/382 (21%)
Query: 129 WMVHRTPGSE--------IWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGR 180
W HR +E I D+ L S L++ L S L Q+ ++ G L++ +
Sbjct: 91 WYFHRASTNEKVERAIPVIKDINLLSRDLFEDLKSS---NDLGDFQL---ERKGLLMLYK 144
Query: 181 TP---EELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAM 237
T EE + + E+ K L GL L+ L EP + ++DA
Sbjct: 145 TDAAGEEEMTVAEKAKYL---GLEVSLLNKQQLDAIEPNV---------------EIDAK 186
Query: 238 LAVAYIEKGNRHFASKGRYAEF--YHDPVTCLLRSN--------STGEVEAVQTSKNTLY 287
A+ Y K +RH + Y + +++N S + ++T+K T Y
Sbjct: 187 GAIHY--KCDRHMTPTEFMPKMLEYLKEKSVSIKTNEEILDITLSGSNISEIKTAKGT-Y 243
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ +++AAG WSG + L + +P++ KG+ + ++
Sbjct: 244 TADEVILAAGSWSGIISKKL------NIKLPIQAGKGYRVNVD----------------- 280
Query: 348 GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAA 407
P +N IL + A T + G + +F+G N+ +++ + I A
Sbjct: 281 -------RPTGINLPAILLEAKVAVTPMKGFTRFAGTMEFSGINSIIKKERVKAIGNAAR 333
Query: 408 EFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALG 467
+FYP++ D + + K G+RP PDG P IG ++ + ATGH +G SL
Sbjct: 334 DFYPEIT--ISQDELEDAKS--GMRPVSPDGLPYIGKCDTINNLTFATGHAMMGWSLGPA 389
Query: 468 TAELVADMVLTNPLKVDSAPFA 489
T +LV+++V +D + FA
Sbjct: 390 TGKLVSEIVNNKKTSLDISAFA 411
>gi|167622807|ref|YP_001673101.1| FAD dependent oxidoreductase [Shewanella halifaxensis HAW-EB4]
gi|167352829|gb|ABZ75442.1| FAD dependent oxidoreductase [Shewanella halifaxensis HAW-EB4]
Length = 436
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 187/465 (40%), Gaps = 99/465 (21%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDK-------------------VVPCSGATGA 123
DV +IG GIIG+ A L SV V+DK +P +
Sbjct: 12 DVAVIGGGIIGVCSAYYLHKAGK-SVVVIDKDEIGKACSFGNAGYITPSHFIPLAAPGMI 70
Query: 124 GQGYIWMVHR-------------------------TPG------SEIWDLALRSNKLWKM 152
+G WM++ TP I D+ L+S +L++
Sbjct: 71 QKGIKWMLNPQSPFYVRPSLNVDFLKWLLSFAKKCTPQHTLASQQAILDINLKSLELYQA 130
Query: 153 LADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQ 212
L ++ D + Q G L++ +T + L V + GL+A+ L++ L +
Sbjct: 131 LH---QEAEFD----FEFHQNGLLMLCKTQQGLNDEAATVMAANKLGLKAKMLTAQALKE 183
Query: 213 AEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF-YHDPVTCLLRSN 271
EP + + + A F P D+ + +I + A++G EF H +T
Sbjct: 184 LEPNIKL-DVMGAGFYPEDAHI---APYEFIVAMKNYLAAQG--VEFREHCEITGFTTDT 237
Query: 272 STGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLEN 331
S E+ A T+ + + + ++A G WS L L +PV+P KG + +
Sbjct: 238 SKSEICAATTAIGEINADE-FILANGAWSPKLAKQL------GFSLPVQPGKG---ICIS 287
Query: 332 FNSLKL-NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGF 390
F+S + + A +E ILS + A + + + G + +
Sbjct: 288 FDSAPVKDGAKLE---------------CRTPFILSEAKVAVSPLDNGIRFGGTMELGVL 332
Query: 391 NTE----VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVP 446
+++ + I + K AA + P L D D ++ G RP PDG P+IG P
Sbjct: 333 SSQESSGISHNRIKGLTKSAARYLPDL-DTTQVD---PKEFWSGFRPCSPDGLPIIGRAP 388
Query: 447 GLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
L+ + LATGH +GLSL T +LV++++ +D PF+ Q
Sbjct: 389 QLANLTLATGHAMMGLSLGPITGKLVSEIIAKEETSLDLTPFSPQ 433
>gi|418620615|ref|ZP_13183415.1| glycine oxidase ThiO [Staphylococcus hominis VCU122]
gi|374822079|gb|EHR86112.1| glycine oxidase ThiO [Staphylococcus hominis VCU122]
Length = 371
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 129/257 (50%), Gaps = 34/257 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IARQ L S L +A++D+ VP A+ G + + T ++++
Sbjct: 3 DVLIIGSGVIGMSIARQ-LSQSHLDIALIDRDVPGKHASYKAGGMLGAQNEFTEDTDLFR 61
Query: 142 LALRSNKLWKMLADSLR-DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LAL S L+ L L + G+D I ++ +G + + PE++ L+++ + L
Sbjct: 62 LALESRSLFPQLCQDLEAETGID----IQFQNSGLIKVANRPEDVESLEKQYQFLSG--- 114
Query: 201 RAEYLSSSDLLQAEPEL------MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKG 254
L SS ++ ++ EL V A ++P D Q++A + K +
Sbjct: 115 ----LDSSVIVLSDEELTHLTNGTVTSSEMAIYIPQDGQINA----NHYTKALFTSLKQR 166
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
+ + + V + R N +VE TS+ TL +KK ++VAAG W+ L+ T+
Sbjct: 167 QIKRYVNTEVQSVQRQNGYYDVE---TSQGTLQAKK-VIVAAGAWTSKLL------TQYS 216
Query: 315 LDIPVKPRKGHLLVLEN 331
L V KG +L++EN
Sbjct: 217 LPRDVVGVKGEVLLIEN 233
>gi|89092605|ref|ZP_01165558.1| D-amino acid dehydrogenase small subunit [Neptuniibacter
caesariensis]
gi|89083117|gb|EAR62336.1| D-amino acid dehydrogenase small subunit [Oceanospirillum sp.
MED92]
Length = 418
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 192/454 (42%), Gaps = 89/454 (19%)
Query: 84 VIIIGAGIIGLT--------------IARQLLVGSDLSVAVVDKVVPCSGATGAGQG--- 126
V+++GAG++G+T I RQ+ V + S A ++ P A AG G
Sbjct: 3 VLVLGAGVVGVTSAWYLAKAGHDVTIIDRQVDVALETSYANAGQISPGYSAPWAGPGIPV 62
Query: 127 --YIWMVHR-----TPGSEI------W---------DLALRSNKLWKM-LADSLRDQGLD 163
W++ G E+ W + A NK + LA+ RD +D
Sbjct: 63 KAVKWLMQDLAPFMISGKELDTQTLSWMTKMLTNCTESAYHVNKARMVRLAEYSRDCFVD 122
Query: 164 ---PLQVIGWKQT-GSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV 219
L + ++T G+L + RT +++ K+ + L E+G+ + L ++ EP L
Sbjct: 123 LRNELDIDYEQRTKGTLQVFRTEKQVKDSKKDISVLEESGVDFQVLDVDGCVEYEPALAN 182
Query: 220 GEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGE-V 276
+D LP D D K A + + T +L N+ G+ +
Sbjct: 183 VKDKIVGGLRLPGDETGDCF-------KFTNSLADECKKMGVKFIMKTDILNINTQGDQI 235
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
E+V TS+ + + A +VA G +S ++ ++I L +PV P KG+ L L ++ K
Sbjct: 236 ESVTTSRGKM-TADAYLVALGSYSTPVL------SKIDLKVPVYPIKGYSLTLPIVDASK 288
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
P + +++T D I +G + + A +N E+E+
Sbjct: 289 ------------------APTSTVMDETYKVAVTRFDDRIR---VGGTAEIASYNKELEE 327
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ ++ +P D+ A+F + GLRP PDG P++G S +FL TG
Sbjct: 328 KRKANVEFVVSDLFPGGGDIEQAEFWT------GLRPMTPDGTPILGETK-YSNLFLNTG 380
Query: 457 HEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
H LG +++LG+ + VAD++ +D +V
Sbjct: 381 HGTLGWTMSLGSGKYVADIISQRQPDIDKEGLSV 414
>gi|443628179|ref|ZP_21112538.1| putative glycine oxidase [Streptomyces viridochromogenes Tue57]
gi|443338354|gb|ELS52637.1| putative glycine oxidase [Streptomyces viridochromogenes Tue57]
Length = 388
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 182/423 (43%), Gaps = 62/423 (14%)
Query: 77 SRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG 136
SR T DV++IG GIIGL A + G + VVD P GA G + V
Sbjct: 2 SRTRTSDVLVIGGGIIGLVTAWR-AAGRGFTTTVVDP-EPGGGAAQVAAGMLAAVTELHY 59
Query: 137 SE--IWDLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
E + L L S + + A L + G D +G+++ G+L + ++ L+E
Sbjct: 60 GEQTLLGLNLASARRYPDFAAELTEVTGHD----LGYRRCGTLAVALDADDRAHLRELHA 115
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLD----AMLAVAYIEKGNR 248
++GL +E+LS + + EP L G R + D Q+D A VA E+
Sbjct: 116 LQRQSGLDSEWLSGRECRRLEPMLAPG--VRGGLRVDGDHQIDPRRLARALVAACERAGV 173
Query: 249 HFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLM---H 305
F +AE + ++R + G V T+ T +V+AAG SG L
Sbjct: 174 VFHQA--WAERFD-----VVRERAAG----VTTADGTELRAGQVVLAAGSLSGRLAGVPD 222
Query: 306 DLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQIL 365
D+L PV+P KG +L L ++ Y T+ V Q+
Sbjct: 223 DVL--------PPVRPVKGQVLRL-----------TVPKRYAPFLSRTVR-AVVRGSQVY 262
Query: 366 SISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNR 425
+ + G LV+G++ + G++T V + + + A E P + +L L +
Sbjct: 263 LVPRES-----GELVVGATSEELGWDTTVTAGGVYELLRDAHELVPGITELPLTE----- 312
Query: 426 KVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDS 485
R GLRP PD P++GP L + LATGH G+ L T + +A ++ T L ++
Sbjct: 313 -TRAGLRPGSPDNAPLLGPTE-LEGLLLATGHYRNGVLLTPVTGDAMAHVLATGELPEEA 370
Query: 486 APF 488
PF
Sbjct: 371 RPF 373
>gi|91225125|ref|ZP_01260347.1| D-amino acid dehydrogenase small subunit [Vibrio alginolyticus
12G01]
gi|91190068|gb|EAS76339.1| D-amino acid dehydrogenase small subunit [Vibrio alginolyticus
12G01]
Length = 418
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 136/315 (43%), Gaps = 43/315 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++L +++ ++ L ++G R + + ++ EP L + +D L
Sbjct: 133 RQFGTLQVFRTHQQLQAIEKDMQLLEQSGTRFKLMDVEQCIEQEPGLALVKDKLVGGLHL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D + ++ + G EF + + ++ VQT++ +
Sbjct: 193 PDDETGDCH---QFCQQLTELAKANGVRFEFDTEVSNWVTVGK---KIIGVQTNRGQ-FK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
VVA+G +S +L+ L +DIPV P KG+ L + ME
Sbjct: 246 ADQYVVASGSYSTALLKQL------DIDIPVYPVKGYSLTI-----------PME----- 283
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D P + ++MT D I + + + AGF+T + Q + I +
Sbjct: 284 --DEHFSPRSTVMDETYKVAMTRFDDRIR---VAGTAELAGFDTSLPQKRKNTIEMVIRD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ D A+F S G RP PDG P+IG +F TGH LG ++A G+
Sbjct: 339 LFPRCGDFSQAEFWS------GFRPMTPDGTPIIGATK-YDNLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTNPLKV 483
+L+A ++ KV
Sbjct: 392 GQLLASVMKGEKAKV 406
>gi|418574850|ref|ZP_13139010.1| glycine D-amino acid oxidase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379326645|gb|EHY93763.1| glycine D-amino acid oxidase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 371
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 169/392 (43%), Gaps = 64/392 (16%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIW 140
FDVIIIG+G+IG++IAR+ L L +A++D+ V A+ A G + + T ++
Sbjct: 5 FDVIIIGSGVIGMSIARE-LSQKGLRIAIIDRNVRGMYASYAAGGMLGAHNEFTESCSLF 63
Query: 141 DLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
LA +S +++ L D L + GLD I + ++G + + +T + +++++ + L +
Sbjct: 64 HLARQSQAMFQSLKDRLLSEVGLD----IEYLESGLVKMAKTETDNPIVEQQFQFLHQHD 119
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA--MLAVAYIEKGNRHFASKGRYA 257
+ LSS L + + A +P D Q++A + RH
Sbjct: 120 SNTQLLSSKSLEAITDNNVQSQTLTAMLIPKDHQVNANQYTKALLLSLAKRHIQL----- 174
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
H V + + N+ V T K+T Y + +VVAAG WSG L++ +
Sbjct: 175 -IDHSEVQAITKQNNG---YTVMTQKDT-YRAEKVVVAAGAWSGQLLNQYFSQN------ 223
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI- 376
PV KG +L++E H L L ++ MT ++
Sbjct: 224 PVTGVKGEVLLVE------------------HPTLNLQT---------TLFMTNGCYIVP 256
Query: 377 ---GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
++G++ + V + + K+A + P L + L S G+RP
Sbjct: 257 KKNHRYLIGATSYVDDYTIGVTKPGKHWLCKQAQHYVPNLANSKLIHQWS------GIRP 310
Query: 434 YMPDGKPVIGPVPGLSKVFLATGHEGLGLSLA 465
+G+P++ V +F+ TGH G+ L+
Sbjct: 311 TSTNGQPIMDEVD--HHLFVVTGHHRNGILLS 340
>gi|66043986|ref|YP_233827.1| FAD dependent oxidoreductase [Pseudomonas syringae pv. syringae
B728a]
gi|63254693|gb|AAY35789.1| glycine oxidase [Pseudomonas syringae pv. syringae B728a]
Length = 367
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
+ VQT + + +++AAG WSG L+ L L++PV+P KG +++ + +
Sbjct: 184 ISGVQTPAGDITGDR-VILAAGAWSGELLKTL------GLELPVEPVKGQMILYKCASDF 236
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+SM +L+ A G++++GS+ + GF+
Sbjct: 237 L---SSM---------------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKTTT 272
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
Q ++ + A E P L A+ +S GLRP P+G P IGP+ G ++L
Sbjct: 273 QAALESLKASAVELLPPLAH---AEPVSQWA---GLRPGSPEGIPFIGPLDGFDGLWLNC 326
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L+ D++L +D AP+A GR
Sbjct: 327 GHYRNGLVLAPASCQLITDLLLDREPIIDPAPYAPAGR 364
>gi|336236545|ref|YP_004589161.1| glycine oxidase ThiO [Geobacillus thermoglucosidasius C56-YS93]
gi|335363400|gb|AEH49080.1| glycine oxidase ThiO [Geobacillus thermoglucosidasius C56-YS93]
Length = 377
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 175/423 (41%), Gaps = 71/423 (16%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDK-------VVPCSGATGAGQGYIWMVH 132
H +DV I+G GIIG +IA QL + V++K +G GA +
Sbjct: 4 HHYDVAIVGGGIIGASIAFQL-AKRHFRIGVLEKGRMAGQASSAAAGMLGAQSEF----- 57
Query: 133 RTPGSEIWDLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKER 191
S + LAL+S ++ LA+ L++ G+D IG Q G L + T EE L+
Sbjct: 58 -AEESPLIPLALKSRAMFPPLAEELKELTGID----IGLVQKGMLKVAVTEEEAAALRRH 112
Query: 192 VKQLCEAGLRAEYLSSSDLLQAEPELMVGED-SRAAFLPYDSQLDAM-LAVAYIEKGNRH 249
+ A +LS +L + EP V D + A LP D Q+ A LA A +
Sbjct: 113 YEFWRHTDEPAHWLSGDELAEMEPN--VSRDLTGAMHLPADGQVSAPDLAFALANASVAY 170
Query: 250 FASKGRYAEF--YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDL 307
A Y EF +H + + GE+ A WS +
Sbjct: 171 GAKWHEYTEFIDFHQENYSYVIHTNHGEIAADAVVVAAG-----------AWSS----QV 215
Query: 308 LRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSI 367
L +T I L P+ P KG L+++ L ++A + + P + N
Sbjct: 216 LEKTGISL--PMYPVKGECLLVKTEKPL------IQATVFAENGCYIVPKRGN------- 260
Query: 368 SMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKV 427
L++G++ F+ +V I + +RA P L++ A++ K
Sbjct: 261 ----------RLLIGATSMPRTFDRKVSVQGIMSLLERAQRLVPGLKN---AEW---EKA 304
Query: 428 RIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAP 487
G RP DG P IG P +V++ATGH G+ L+ T L+AD++ + D AP
Sbjct: 305 WSGTRPQTGDGLPYIGKHPRYERVWVATGHYRNGILLSPVTGVLLADLIEGKESENDLAP 364
Query: 488 FAV 490
F++
Sbjct: 365 FSL 367
>gi|333927629|ref|YP_004501208.1| D-amino acid dehydrogenase small subunit [Serratia sp. AS12]
gi|333932583|ref|YP_004506161.1| D-amino acid dehydrogenase small subunit [Serratia plymuthica AS9]
gi|386329452|ref|YP_006025622.1| D-amino acid dehydrogenase small subunit [Serratia sp. AS13]
gi|333474190|gb|AEF45900.1| D-amino acid dehydrogenase small subunit [Serratia plymuthica AS9]
gi|333491689|gb|AEF50851.1| D-amino acid dehydrogenase small subunit [Serratia sp. AS12]
gi|333961785|gb|AEG28558.1| D-amino acid dehydrogenase small subunit [Serratia sp. AS13]
Length = 434
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 134/322 (41%), Gaps = 44/322 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL--MVGEDSRAAFL 228
+Q G+L + RTP++ + + L +AG+ + L + L EP L + + + L
Sbjct: 133 RQGGTLQLFRTPQQFESAAKDIAVLEDAGVPYKLLEAHQLATVEPALAQVAHKLTGGLQL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + K A + Y+ V LL ++ VQ ++
Sbjct: 193 PNDETGDCQLFTQQLAK----LAQQAGVTFLYNRSVDRLLVEGD--QISGVQCGAE-VFK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
+ VVA G +S +L+ DL+ IPV P KG+ L + + +++
Sbjct: 246 ADSYVVAFGSYSTALLRDLV-------SIPVYPLKGYSLTIPITDEAAAPFSTV------ 292
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
+ A T + +G + GFNT++EQ + + +
Sbjct: 293 ---------------LDETYKIAITRFDKRIRVGGMAEIVGFNTQLEQKRRETLEMVVRD 337
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
YP + A F + GLRP PDG P++G L +FL TGH LG ++A G+
Sbjct: 338 LYPNGGRIEEATFWT------GLRPMTPDGTPIVGKT-SLKNLFLNTGHGTLGWTMACGS 390
Query: 469 AELVADMVLTNPLKVDSAPFAV 490
+L++D++ + S AV
Sbjct: 391 GQLLSDLISGTTPAIPSDDLAV 412
>gi|428214563|ref|YP_007087707.1| glycine/D-amino acid oxidase, deaminating [Oscillatoria acuminata
PCC 6304]
gi|428002944|gb|AFY83787.1| glycine/D-amino acid oxidase, deaminating [Oscillatoria acuminata
PCC 6304]
Length = 368
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 166/395 (42%), Gaps = 49/395 (12%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMV--HRTPGSEIWD 141
V IIG G++G IA +L + +L + V+D P G+T A G + + H+ G
Sbjct: 4 VAIIGCGVVGAAIAYELSLVPNLEITVIDCHQPAQGSTQAALGVLMGIISHKVKG----- 58
Query: 142 LALRSNKLWKMLADS-LRDQGLDP----LQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+LW++ S LR Q L P I + + G L++ E++ ++
Sbjct: 59 ------RLWRLREQSILRYQTLIPELEATAPISFNRQGILMLCFPGEDMAQWEKLAATRR 112
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRY 256
G + + L ++ Q P+L E A P D Q+D ++ + + + R+
Sbjct: 113 TQGWQLDLLEPQEVRQRYPQLGKVEIVGAVHSPQDGQVDPVVLTHALVRAAEGNGVRFRF 172
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
E L + S + + ++T++ L +V+AAG S L L EI
Sbjct: 173 GERVER--INYLETESLKQCDRLETTQGNL-EVDWLVMAAGLGSTPLTAGLESPVEI--- 226
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
+P G L L N + ++ G D+ + P Q + + + AT +
Sbjct: 227 ---RPVLGQALQLRLQNP--MGDGEIQPVITG-DDVHIVPCQDSDYPVRDYWVGATVEFT 280
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
G G E + ++ ++ +RA F P DL L + + GLRP P
Sbjct: 281 GE----------GDPMEGDPVLLKQVLQRAIGFCP---DLALGEIVRTWS---GLRPR-P 323
Query: 437 DGK--PVIGPVPGLSKVFLATGHEGLGLSLALGTA 469
+G+ P+IGP+ G V LATGH G+ LA TA
Sbjct: 324 EGQPAPIIGPLAGFENVLLATGHYRNGVLLAPATA 358
>gi|359781826|ref|ZP_09285049.1| FAD dependent oxidoreductase [Pseudomonas psychrotolerans L19]
gi|359370196|gb|EHK70764.1| FAD dependent oxidoreductase [Pseudomonas psychrotolerans L19]
Length = 284
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
PVT LR V VQT++ ++++ ++VV AG WSG L+ L L +PV+
Sbjct: 87 ESPVTGFLRQGE--RVVGVQTAREAIHAE-SVVVCAGAWSGDLLQSL------GLAVPVR 137
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P KG +L+ AGY+ +L+ A G+++
Sbjct: 138 PVKGQMLLYRQ-----------PAGYL-------------TSMVLAKGRYAIPRRDGHIL 173
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GS+ + A F+ + + AAE P L + GLRP PDG P
Sbjct: 174 IGSTLEHAEFDKTPTAEALASLQASAAELLPALAGQAPVAHWA------GLRPGSPDGVP 227
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
IGPVP L ++L GH GL LA + +L+ D++ +D AP+A R
Sbjct: 228 FIGPVPELPGLWLNCGHYRNGLVLAPASCQLLTDLLTERTPIIDPAPYAPGAR 280
>gi|398948508|ref|ZP_10672829.1| glycine oxidase ThiO [Pseudomonas sp. GM33]
gi|398160561|gb|EJM48828.1| glycine oxidase ThiO [Pseudomonas sp. GM33]
Length = 366
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 275 EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNS 334
+V VQT+ + + +V+ AG WSG DLL+ +++L PV+P KG +++ +
Sbjct: 184 KVVGVQTATGAVLGDQ-VVLTAGAWSG----DLLKRLDLML--PVEPVKGQMILYKCAAD 236
Query: 335 LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEV 394
+ +L+ A G++++GS+ + GF+
Sbjct: 237 FLPS------------------------MVLAKGRYAIPRRDGHILIGSTLEHEGFDKTP 272
Query: 395 EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLA 454
++ + A E P L D A+ + + GLRP P+G P IGPVPG ++L
Sbjct: 273 TGAALESLKASAVELIPALAD---AEVVGHWA---GLRPGSPEGIPYIGPVPGFEGLWLN 326
Query: 455 TGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D P+A GR
Sbjct: 327 CGHYRNGLVLAPASCQLFADVMLGRTPIIDPTPYAPAGR 365
>gi|255320494|ref|ZP_05361675.1| D-amino acid dehydrogenase small subunit [Acinetobacter
radioresistens SK82]
gi|262378386|ref|ZP_06071543.1| glycine oxidase ThiO [Acinetobacter radioresistens SH164]
gi|421464049|ref|ZP_15912742.1| FAD dependent oxidoreductase [Acinetobacter radioresistens
WC-A-157]
gi|255302466|gb|EET81702.1| D-amino acid dehydrogenase small subunit [Acinetobacter
radioresistens SK82]
gi|262299671|gb|EEY87583.1| glycine oxidase ThiO [Acinetobacter radioresistens SH164]
gi|400206423|gb|EJO37400.1| FAD dependent oxidoreductase [Acinetobacter radioresistens
WC-A-157]
Length = 426
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 177/440 (40%), Gaps = 91/440 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDK---VVPCSGATGAGQ---GYI--WMVHRTP 135
V+++G+G+IG+T A L + V V+D+ + A AGQ GY W P
Sbjct: 3 VVVLGSGVIGVTTA-WYLAQAGHEVTVIDRQPGAALETSAANAGQVSPGYATPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKML------------------ADSLRD--QG 161
I W L++R + +W+ML A+ RD +
Sbjct: 62 LKAIKWMFQKHAPLSIRPDGTSFQIAWMWQMLKNCNIQHYQENKSRMVRIAEYSRDCLKE 121
Query: 162 LDPLQVIGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV 219
L I + +Q G+L + R+ ++ + ++ L EAG+ E L + DL++ EP L
Sbjct: 122 LRKTTGIAYESRQQGTLQLFRSEQQYANAAKDIEVLKEAGVPFELLEAKDLMKVEPALKY 181
Query: 220 GEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE-FYHDPVTCLLRSNSTGEV 276
LP D D L +H A + A + V+ +V
Sbjct: 182 SSHKLTGGLRLPNDETGDCQLF-------TQHLAEMAKAAGVIFKFGVSIEKLVVEADKV 234
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
AVQTS+ L V+A G +S L+ L+ IPV P KG+ L +
Sbjct: 235 TAVQTSEG-LVKADQYVIAMGSFSTPLLRGLIH-------IPVYPLKGYSLTIPI----- 281
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
D T P + +++T D I +G + GFN ++
Sbjct: 282 -------------QDATRAPVSTVLDETYKVAVTRFDDRIR---VGGMAEIVGFNYQLLP 325
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + YP L A F + GLRP PDG P++G LS +FL TG
Sbjct: 326 ERRKTLEMVVNDLYPSAGRLKEATFWT------GLRPMTPDGTPIVGKT-ALSNLFLNTG 378
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG ++A G+ +L++D++
Sbjct: 379 HGTLGWTMACGSGKLLSDLM 398
>gi|1161219|gb|AAB39269.1| homolgous to D-amino acid dehydrogenase enzyme [Pseudomonas
aeruginosa PAO1]
Length = 364
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V TS+ + K +++AAG WSG L+ L L++PV P KG +++
Sbjct: 183 VVGVATSRGEIRGDK-VLLAAGAWSGELLKPL------GLELPVVPVKGQMIL------- 228
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + +GF+
Sbjct: 229 ----------YKCAADFLPR-------MVLAKGRYAIPRRDGHILIGSTLEHSGFDKTPT 271
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+ + AE P+L D+ + GLRP P+G P IGPVPG ++L T
Sbjct: 272 DEAQESLRVSVAELLPELADMQPVAHWA------GLRPGSPEGIPYIGPVPGFDGLWLNT 325
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + L+AD++ +D AP+A GR
Sbjct: 326 GHYRNGLVLAPASCRLLADLMSGREPIIDPAPYAPAGR 363
>gi|302185250|ref|ZP_07261923.1| FAD dependent oxidoreductase [Pseudomonas syringae pv. syringae
642]
Length = 367
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
+ VQT+ + + +++AAG WSG L+ L LD+PV+P KG +++ + +
Sbjct: 184 ISGVQTASGDVTGDR-VILAAGAWSGELLKTL------GLDLPVEPVKGQMILYKCASDF 236
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+SM +L+ A G++++GS+ + GF+
Sbjct: 237 L---SSM---------------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKTTT 272
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
Q ++ + A E P L A+ ++ GLRP P+G P IGP+ G ++L
Sbjct: 273 QAALESLKASAVELLPPLAH---AEPVAQWA---GLRPGSPEGIPFIGPLEGFDGLWLNC 326
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L+AD++L + AP+A GR
Sbjct: 327 GHYRNGLVLAPASCQLIADLLLEREPIIYPAPYAPAGR 364
>gi|325272207|ref|ZP_08138630.1| FAD dependent oxidoreductase [Pseudomonas sp. TJI-51]
gi|324102673|gb|EGC00097.1| FAD dependent oxidoreductase [Pseudomonas sp. TJI-51]
Length = 365
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 37/224 (16%)
Query: 270 SNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVL 329
+ G V VQT+ L + + +V++AG WSG DLLR + L +PV+P KG +++
Sbjct: 177 AQQGGRVTGVQTADGVLAADE-VVLSAGAWSG----DLLRT--LGLALPVEPVKGQMIL- 228
Query: 330 ENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAG 389
F + SM +L+ A G++++GS+ + AG
Sbjct: 229 --FKCAEDFLPSM---------------------VLAKGRYAIPRRDGHILVGSTLEHAG 265
Query: 390 FNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLS 449
++ + + A E P+L + + GLRP P+G P IGPVPG +
Sbjct: 266 YDKTPTGDALQSLKASAVELLPELEGATVVAHWA------GLRPGSPEGIPYIGPVPGHA 319
Query: 450 KVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
++L GH GL LA + +L D++ +D AP+A GR
Sbjct: 320 GLWLNCGHYRNGLVLAPASCQLFTDLLTGAEPIIDPAPYAPAGR 363
>gi|126657423|ref|ZP_01728582.1| FAD dependent oxidoreductase [Cyanothece sp. CCY0110]
gi|126621410|gb|EAZ92122.1| FAD dependent oxidoreductase [Cyanothece sp. CCY0110]
Length = 370
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 179/406 (44%), Gaps = 52/406 (12%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMV--HRTPGSEIWD 141
+ IIGAG+IG IA +L + DL + ++D P SG+TGA G + + H+ G W
Sbjct: 4 ITIIGAGVIGAAIAYELSLIKDLDITLIDAKQPASGSTGAALGVLMAIISHKRKGRG-WK 62
Query: 142 LALRSNKLWKMLADSLRDQGLDPLQVIGWK---QTGSLLIGRTPEELVMLKERVKQL-CE 197
L S K + L L +V G K + +L+ R ++ + E+++ E
Sbjct: 63 LRQLSLKRYTTLIPELE-------EVTGKKIPINSQGILMLRFADDPLDRWEKLQYFRNE 115
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
G E ++LL+ P++ A + P D Q++ + + ++
Sbjct: 116 HGYSLEIWDQNELLRRCPQVQNDRVVGAIYSPQDRQINPTILTESLILAASKNGVNCQFG 175
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
+ ++ L S++ G+ ++T TL + +++ AG S SL+++L I
Sbjct: 176 IKVQNIISKRLNSSNDGQFYNIKTPYQTLET-DWLIMCAGLGSTSLINELQPMVNI---- 230
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
KP G L +KLN + +G D+T P V G+ + I + +
Sbjct: 231 --KPVLGQAL------QIKLNSS------LG--DVTFQP--VITGEDVHIVPINSQE--- 269
Query: 378 NLVLGSSRQFAGFNTEV--EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
+G++ +F EV + +++ + + A F P L + + S ++ R
Sbjct: 270 -YWIGATVEFPNEMGEVLPQLDLLETVKRHAFSFCPDLEKGEIINTWSGKRPR------- 321
Query: 436 PDGK--PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN 479
PDG+ P+I VP V LATGH G+ LA TA ++ D +L N
Sbjct: 322 PDGEPAPIIKEVPNYPCVLLATGHYRNGVLLAPATALIIRDKILEN 367
>gi|289937473|ref|YP_003482075.1| FAD dependent oxidoreductase [Natrialba magadii ATCC 43099]
gi|448283908|ref|ZP_21475173.1| FAD dependent oxidoreductase [Natrialba magadii ATCC 43099]
gi|289533164|gb|ADD07513.1| FAD dependent oxidoreductase [Natrialba magadii ATCC 43099]
gi|445572003|gb|ELY26545.1| FAD dependent oxidoreductase [Natrialba magadii ATCC 43099]
Length = 377
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 151/367 (41%), Gaps = 59/367 (16%)
Query: 120 ATGAGQGYIWMV--HRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLL 177
AT AG G I RT + ++ A + + L L +G + + G++
Sbjct: 38 ATTAGAGVISAATSSRTADDDWFEFATDAVGYYPELVSQLECEGYSDTS---YGRLGTIG 94
Query: 178 IGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV------GEDSRAAFLPYD 231
+ +EL E V ++ R L+ D L +P V E RA P
Sbjct: 95 VAIEADELESYDETVARIDS---RQSDLAPVDEL--DPAAAVDRFPPLAEPKRAFHHPGA 149
Query: 232 SQLDA-MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKK 290
++++ + A A + G H + D + + +V V+T+ + + +
Sbjct: 150 ARVNGDVFARALRDAGREHGLTT-----MTSDVTEVRIDGD---QVTGVETASGSRFDAE 201
Query: 291 AIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHH 350
+V+A G WS + ++ ++IPV P++G ++ LE+ N+ ++A HH
Sbjct: 202 HVVIAGGAWSSAFGE------QLAVEIPVTPKRGQIVHLEHPNADTGTWPIVKA--FRHH 253
Query: 351 DLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFA-GFNTEVEQTIIDRIWKRAAEF 409
+ P G LV+G++R+ GF + I + + A
Sbjct: 254 YIVPWPD-------------------GRLVVGATREAGVGFEPRLTAGGIHEVLEEALRV 294
Query: 410 YPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTA 469
P L D + D R+GLRP DG PV+G VP + FLATGH GL L +
Sbjct: 295 APGLADATVVDR------RVGLRPVCADGMPVLGAVPDIDGAFLATGHGATGLMLGPYSG 348
Query: 470 ELVADMV 476
+LVAD V
Sbjct: 349 KLVADHV 355
>gi|402567212|ref|YP_006616557.1| D-amino acid dehydrogenase small subunit [Burkholderia cepacia GG4]
gi|402248409|gb|AFQ48863.1| D-amino acid dehydrogenase small subunit [Burkholderia cepacia GG4]
Length = 428
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 132/305 (43%), Gaps = 44/305 (14%)
Query: 174 GSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FLPYD 231
G+L + RT ++L + + L EA + E LS ++L AEP L LP D
Sbjct: 136 GTLQLFRTQQQLDGAAKDIAVLQEANVPFELLSPAELKHAEPALAAVSHKLTGGLRLPGD 195
Query: 232 SQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKA 291
D L + K RY + P+ L + + G++ VQ T+ + A
Sbjct: 196 ETGDCQLFTTRLAALAESLGVKFRY----NTPIDAL--AIAGGKIAGVQCGSETVRAD-A 248
Query: 292 IVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHD 351
VVA G +S S + +L++ IPV P KG+ + + +N A+
Sbjct: 249 YVVALGSYSTSFISNLMK-------IPVYPLKGY-----SITAPIVNQAAA--------- 287
Query: 352 LTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYP 411
P + I++T D I +G + GF+ + + + + +P
Sbjct: 288 ----PVSTVLDETYKIAITRFDDRI---RVGGMAEIVGFDKNLRAARRETLEMCVNDLFP 340
Query: 412 KLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAEL 471
D A F + GLRP PDG P++G P +S +FL TGH LG +++ G+ +L
Sbjct: 341 GGGDTSKATFWT------GLRPMTPDGTPIVGRTP-VSNLFLNTGHGTLGWTMSCGSGQL 393
Query: 472 VADMV 476
+AD++
Sbjct: 394 LADLI 398
>gi|408674879|ref|YP_006874627.1| FAD dependent oxidoreductase [Emticicia oligotrophica DSM 17448]
gi|387856503|gb|AFK04600.1| FAD dependent oxidoreductase [Emticicia oligotrophica DSM 17448]
Length = 444
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 146/352 (41%), Gaps = 54/352 (15%)
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
D++L S L++ L+ +D + +++ G +++ +T E Q E GL
Sbjct: 129 DISLLSKALYQDLS---KDAAFN----FAFEEKGLMMLCKTEHSFEEEVEVAHQAKELGL 181
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLP------YDSQLDAMLAVAYIEKGNRH-FASK 253
+ LS ++L + EPE V D A L Y +QL L I KG + + ++
Sbjct: 182 ETKILSVAELHKLEPE--VKPDVAGAILYTGDAHLYPNQLVKNLKSYLINKGVKFLYNTE 239
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
EF + + G ++KN + +V+A G WS +L L
Sbjct: 240 VTGFEFEKKEINKIKVKQIAG-----NSTKNLELKTQNLVIATGSWSPNLAEML------ 288
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
+ +P++ KG+ + + KLN S IL + A T
Sbjct: 289 NIGLPMQAGKGYSVTYQQNEGQKLNIPS----------------------ILLEARVAIT 326
Query: 374 DVIGNLV-LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
+ NL+ G + + G N E+ + I K F+P D+ + + +V GLR
Sbjct: 327 PMSDNLIRFGGTMEIGGINDEINMNRVRGIIKAVPNFFPNY-DIKMPE---KEQVWYGLR 382
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVD 484
P PDG P IG + +A+GH +GLSLA T +LV +++ +D
Sbjct: 383 PCSPDGLPYIGRTNSYKNLIIASGHAMMGLSLAPATGKLVQEIIDNEKNSID 434
>gi|332527923|ref|ZP_08403957.1| fad dependent oxidoreductase [Rubrivivax benzoatilyticus JA2]
gi|332112497|gb|EGJ12290.1| fad dependent oxidoreductase [Rubrivivax benzoatilyticus JA2]
Length = 417
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 134/322 (41%), Gaps = 43/322 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDS--RAAFL 228
+ G+L + RT ++L + V+ L + G+ E L ++ EP L + ++ A L
Sbjct: 133 RAQGTLQLFRTQKQLDGIVGDVEVLRQYGVPFEVLDREGFVKVEPALALTQEKFVGALRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D + + R + R+ T S G V V+T+ TL +
Sbjct: 193 PNDETGDCFKFTNRLAEMARALGVRFRFD------TTVQGVEVSGGRVSGVRTTAGTLSA 246
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
+ +VVA G +S M L L +P+ P KG+ + V
Sbjct: 247 DR-VVVALGSFSPQWMKPL------GLSLPIYPVKGYSIT------------------VP 281
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D P + +++T D + +G + + GF+ + + +
Sbjct: 282 ITDAAFAPESTIMDETHKVAVTRLGD---RIRVGGTAELGGFDLTLRGGRRQTLEHVVTD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ D+ A+F GLRP PDG P++G P + + LATGH LG ++A GT
Sbjct: 339 LFPRGGDVSRAEFWC------GLRPMTPDGTPIVGETP-VRDLLLATGHGTLGWTMAAGT 391
Query: 469 AELVADMVLTNPLKVDSAPFAV 490
++AD+V ++D AP +
Sbjct: 392 GRVIADIVSGRQPEIDVAPLNI 413
>gi|254197410|ref|ZP_04903832.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei S13]
gi|169654151|gb|EDS86844.1| oxidoreductase, FAD-binding [Burkholderia pseudomallei S13]
Length = 392
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 165/411 (40%), Gaps = 76/411 (18%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T DV++IG G+IG + A L ++V V++K A+G G + RT G +
Sbjct: 4 TTDVVVIGGGLIGCSTALHL-ARRGITVRVIEKDYVARHASGVNAGGV----RTLGRALP 58
Query: 141 DLALR--SNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA 198
+L L + +LW+ L D + G G+K G + + E L L+ R + +
Sbjct: 59 ELPLSIAAKRLWRTLPDLVGSDG-------GFKAVGQIRVAENEEHLERLRTRSRTVAAL 111
Query: 199 GLR--AEYLSSSDLLQAEPEL--------MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNR 248
GL + + +L P L +V +D A LPY + L A+ + R
Sbjct: 112 GLDYVERVIEADELYDRLPALVPHCVGGLLVEDDGYA--LPYPTTL------AFKRQAER 163
Query: 249 HFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLL 308
A H VT + + G+ V+TS Y + +V AAG WSG L L
Sbjct: 164 CGA-------LIHQGVTVANPTYAQGQ-WTVRTSDGACYRARTLVNAAGAWSGRLAAVLG 215
Query: 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQIL-SI 367
+P++P L+V A VG +L Q +G +L
Sbjct: 216 DA------VPLQPAGSMLMVTARM-------APFVGPVVGSAGRSLSFKQFPNGTVLIGG 262
Query: 368 SMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKV 427
A D+ N G+S G + R + A + +P +R + R V
Sbjct: 263 GHRAAVDLDTN---GTSLTLEG---------LARAARTAIDLFPIMR--------TARAV 302
Query: 428 RI--GLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
R G+ ++PDG PVIGP G F A G G L +L+A+++
Sbjct: 303 RFWSGIEGFLPDGLPVIGPSRGSPSAFHAFGFSAHGFQLGPIVGQLLAELI 353
>gi|452749212|ref|ZP_21948982.1| FAD-binding oxidoreductase [Pseudomonas stutzeri NF13]
gi|452007038|gb|EMD99300.1| FAD-binding oxidoreductase [Pseudomonas stutzeri NF13]
Length = 369
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 279 VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLN 338
VQT++ + + + +VVAAG WS L+ L L+IPVKP KG +++ F +
Sbjct: 186 VQTAQGEMRADQ-VVVAAGAWSAQLLATL------GLEIPVKPMKGQMIL---FKCAEDF 235
Query: 339 HASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTI 398
SM +L+ A G++++GS+ + GF+ +
Sbjct: 236 LPSM---------------------VLAKRRYAIPRRDGHILVGSTLEDVGFDKTPTEDA 274
Query: 399 IDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHE 458
++ + A E P L D + K GLRP PDG P IG V G ++L GH
Sbjct: 275 LESLRATAIELLPALADAQVV------KHWAGLRPGSPDGVPYIGQVGGFDGLWLNCGHF 328
Query: 459 GLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGRCC 495
GL LA + +L+ D++L VD +P+A GR
Sbjct: 329 RNGLVLAPASCQLLVDLMLGQAPIVDPSPYAPAGRIA 365
>gi|70725565|ref|YP_252479.1| hypothetical protein SH0564 [Staphylococcus haemolyticus JCSC1435]
gi|68446289|dbj|BAE03873.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 371
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 185/413 (44%), Gaps = 53/413 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+I+G+G+IG++IAR L + L +A+VD+ +P A+ G + + T S+++
Sbjct: 3 DVLIVGSGVIGMSIARH-LSHTQLDIAIVDRDIPGKHASYKAGGMLGAQNEFTEDSDLFR 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LAL S + + L ++L+D+ G+D I ++ +G + I +++ L+ + + L
Sbjct: 62 LALESRECFPELCETLQDETGID----IQYQASGLIKIANQIDDVAHLRSQFQFLHALDN 117
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
LS +L E V A ++P D Q++A + K + R + ++
Sbjct: 118 DVVELSEDELADL-TEGNVTASEMAIYIPNDGQINANHYTKALFKS----LQQRRISRYF 172
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
+ VT ++R N + + +S+ LY+KK ++VA+G WS L+ + L V
Sbjct: 173 NTNVTDIIRQNGYYQ---IVSSQGDLYAKK-VIVASGAWSSQLL------KQYQLPRVVV 222
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
KG +L++E+ +H +++ + + P N +
Sbjct: 223 GVKGEVLLMEH------DHLNLKQTVFMTNGCYIVPKAPN-----------------RYL 259
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+G++ +F ++ + + + A E P+L + + K G+RPY P
Sbjct: 260 IGATSEFDNYSVGNTEQGVSWLEHYATERIPELANAHII------KQWSGVRPYTDGELP 313
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
++ V +++ TGH G+ L+ +A+ +LT F V R
Sbjct: 314 IMDRVD--DGLYVITGHYRNGILLSPVIGRDIANWLLTGVKPTRYESFNVSRR 364
>gi|212710754|ref|ZP_03318882.1| hypothetical protein PROVALCAL_01822 [Providencia alcalifaciens DSM
30120]
gi|212686451|gb|EEB45979.1| hypothetical protein PROVALCAL_01822 [Providencia alcalifaciens DSM
30120]
Length = 433
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 178/442 (40%), Gaps = 89/442 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDK---VVPCSGATGAGQ---GYI--WMVHRTP 135
V+++GAG+IG+T A L V V+D+ V + A AGQ GY W P
Sbjct: 3 VLVLGAGVIGVTTA-WYLAQEGHEVCVIDRQNDVAEETSAGNAGQISPGYATPWGAPGIP 61
Query: 136 GSEI-W------DLALRSNK-------LWKML------------------ADSLRD--QG 161
+ W LA+R + +W+ML A+ RD +
Sbjct: 62 LKAVKWMFEKHAPLAIRPDGSLFQLRWMWQMLKNCDMQHYTMNKSRMVRIAEYSRDCIRQ 121
Query: 162 LDPLQVIGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP--EL 217
L IG+ +Q G+L + RT ++ + L + G+ E L++ L+ AEP E
Sbjct: 122 LRADTGIGYEGRQGGTLQLFRTAKQFENAANDIAVLQQEGVPYELLTAEQLVTAEPALEF 181
Query: 218 MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
+ + + LP D D + K R+ +T R +
Sbjct: 182 VKHKLTGGLRLPNDETGDCQQFTKKLAKMAEQAGVTFRFGCHVEQILTDGKR------IS 235
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
++ + L + + VVA G +S ++ L++ IPV P KG+ L + N L+
Sbjct: 236 GIKVNGEILLADQ-YVVAMGSYSTQMLQQLVK-------IPVYPLKGYSLTMPIINELRA 287
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
+++ + A T + +G + GFN +V Q
Sbjct: 288 PVSTV---------------------LDETYKIAVTRFDQRIRVGGMAEVVGFNLDVLQK 326
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+ + + Y D+ A F + GLRP PDG P++GP S ++L TGH
Sbjct: 327 RCETLKMVVQDLYQGGGDISQAQFWT------GLRPMTPDGTPIVGPTE-FSNLYLNTGH 379
Query: 458 EGLGLSLALGTAELVADMVLTN 479
LG ++A G+ +L+AD++ N
Sbjct: 380 GTLGWTMACGSGKLLADLISGN 401
>gi|422909290|ref|ZP_16943939.1| FAD dependent oxidoreductase family protein [Vibrio cholerae HE-09]
gi|341635437|gb|EGS60153.1| FAD dependent oxidoreductase family protein [Vibrio cholerae HE-09]
Length = 420
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLAAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 193 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 244 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + Q I A
Sbjct: 284 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPQARKATIEMVA 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFAQGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 390 GSASILAD-VLTH 401
>gi|407775748|ref|ZP_11123040.1| glycine/D-amino acid oxidase [Thalassospira profundimaris WP0211]
gi|407281109|gb|EKF06673.1| glycine/D-amino acid oxidase [Thalassospira profundimaris WP0211]
Length = 416
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 139/308 (45%), Gaps = 49/308 (15%)
Query: 174 GSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRA-----AFL 228
G L I RT +++ +++ Q+ E GL+ +SS + L EP L D+ A +F
Sbjct: 136 GILHICRTEQDMAAVEKATAQMQEYGLKRRLVSSEECLTIEPAL---RDATAPIIGGSFT 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D DA + E+ + H +KG F + +T L+ ++ +VQT K +++
Sbjct: 193 PDDESGDAR---KFTERLSAHCIAKGASFHFNTN-ITGLVHDQR--KITSVQTDKGDIHA 246
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A +V G +S ++ + + +P+ P KG+ S+ +N GY G
Sbjct: 247 -DAFLVCLGSYSPLML------APLGIKLPIYPCKGY--------SISIN----TTGYSG 287
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
+ L ++ + S T +L + + + G+N + I +A E
Sbjct: 288 APETAL----IDDSVKMVYSRLGT-----HLRVAGTAELDGYNLRMSPRRQKLIVDKALE 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P D DF S GLRP PD PV+G + ++L TGH LG +++ G+
Sbjct: 339 LFPNSGDRSSIDFWS------GLRPVTPDSAPVLGDTK-YANLYLNTGHGTLGWTMSCGS 391
Query: 469 AELVADMV 476
A+ VAD++
Sbjct: 392 AKAVADLI 399
>gi|302555428|ref|ZP_07307770.1| oxidoreductase [Streptomyces viridochromogenes DSM 40736]
gi|302473046|gb|EFL36139.1| oxidoreductase [Streptomyces viridochromogenes DSM 40736]
Length = 379
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 86/199 (43%), Gaps = 21/199 (10%)
Query: 290 KAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGH 349
A+V AAG W G + + +PV PR+G +LV E ++ H A YV
Sbjct: 192 PAVVNAAGPWGGEMA------ARAGVSLPVLPRRGFVLVTEPLPP-RVRHKVYAADYVA- 243
Query: 350 HDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEF 409
D+ + L S G +++G+SR+ GF+ V + + A
Sbjct: 244 -DV------ASDSAGLQTSPVVEGTPAGPVLIGASRERVGFDRTVSLPALRALAAGATRL 296
Query: 410 YPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTA 469
+P LA + R G RPY+PD P IGP P + A GHEG G+ LA GT
Sbjct: 297 FP-----FLAGVRAMRSY-AGFRPYLPDHLPAIGPDPRAPGLLHACGHEGAGIGLATGTG 350
Query: 470 ELVADMVLTNPLKVDSAPF 488
L+A + +D PF
Sbjct: 351 HLIAQALTGRAPDLDLTPF 369
>gi|42521944|ref|NP_967324.1| D-amino acid dehydrogenase [Bdellovibrio bacteriovorus HD100]
gi|39574474|emb|CAE77978.1| D-amino acid dehydrogenase [Bdellovibrio bacteriovorus HD100]
Length = 415
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 181/454 (39%), Gaps = 122/454 (26%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLS-----VAVVDKVVPCSGATGAGQGYI---WMVH-- 132
D++++GAGIIG + VG++LS V V+DK GA G G Y WM
Sbjct: 7 DILVVGAGIIGAS------VGAELSRRGAKVCVIDK-----GAVGKGCSYGNAGWMTPCF 55
Query: 133 ----RTPGSEI----W----------------DLALRSNKLWKMLADSLRDQGLDPLQV- 167
PG I W DLA K + + + +D L V
Sbjct: 56 AMPLPMPGMLIKSMKWLLNPEGPLYIKPSLSLDLANWMYHFMKNMNATQARRAVDALVVL 115
Query: 168 -----------------IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDL 210
I ++Q G +++ RT + E ++ + G+ + L+S D+
Sbjct: 116 SQKSLTEYEKLGQLYPEIRFQQKGLMMVSRTQAGVAAAVEELEYVKNIGVTGKVLNSDDI 175
Query: 211 LQAEPELM------VGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPV 264
Q EP L V D A PY L V + K R + G E
Sbjct: 176 QQMEPALKAPLLGGVYFDKEAMAEPY-------LVVQALAKEIRK--NGGEILE------ 220
Query: 265 TCLLRSN--STGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
C L+ S +E+V+TS+ T+ +K+ IV+A G WS SL ++R L +P+
Sbjct: 221 NCELQDMEISGNRIESVKTSQGTIRAKQ-IVMATGSWSKSL-AKMMR-----LRVPILGG 273
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KG+ +++ Q + +L A T L +
Sbjct: 274 KGYAMIVPTLEK-----------------------QPQYPIMLVEKKIAITPRENTLRIA 310
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
+ + + + Q ++ I K A EF L L + + +++ GLRP PDG P+I
Sbjct: 311 GTLELVDQDFSITQRRVESIKKGAREF------LHLPEELQVQELWAGLRPCTPDGVPLI 364
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
G L+ + LA GH+ LGL GT LVAD+V
Sbjct: 365 GYHQNLNNLVLAVGHQMLGLQSGAGTGLLVADLV 398
>gi|392956655|ref|ZP_10322181.1| glycine oxidase [Bacillus macauensis ZFHKF-1]
gi|391877152|gb|EIT85746.1| glycine oxidase [Bacillus macauensis ZFHKF-1]
Length = 378
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 171/412 (41%), Gaps = 62/412 (15%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDK-VVPCSGATGAGQ--GYIWMVHRTPGSE 138
+DVII G G+IG +IA L S LSV V+++ + C + AG G +H T
Sbjct: 5 YDVIIAGGGVIGCSIAYHLRKYSSLSVLVLERQTIGCEASMAAGGMLGAQAEIHET--GP 62
Query: 139 IWDLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCE 197
++++A S + MLA L++ G+D I + G L + E+ L+
Sbjct: 63 LYEMARESRSRFPMLAHELKESSGID----IEFVDRGLLKVAWNEEDAAYLQSIRAFHTN 118
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRY 256
AE++ S L EP L GE A +LP D Q+ A L A+ + A+ Y
Sbjct: 119 NHQPAEWVDSRQLKSMEPHLN-GELFGALYLPKDGQVSAARLTKAFAQGAIERGATICEY 177
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNT-LYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
AE VT V+ N Y + V A+G W+ L + T+ L
Sbjct: 178 AEVQKIEVTA----------HGVKVGSNAGEYFAEKFVAASGVWT----EQLAKLTD--L 221
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYV-GHHDLTLHPGQVNHGQILSISMTATTD 374
+P+ P KG L SL + + + GH L G
Sbjct: 222 SLPLYPVKGECL------SLTFPKPPIASTVISGHCYLVPKRG----------------- 258
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
G L++G++ + F+ +V + + +A P+++ L + K G RP
Sbjct: 259 --GRLLIGATMRPDTFDKKVTAGGVLELLDQATTLVPEVK---LGQW---EKAWTGFRPQ 310
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN-PLKVDS 485
DG P +G P ++ A GH G+ L+ T E +A +L + PL +++
Sbjct: 311 TIDGLPYLGAHPENDSLYFAAGHYRNGILLSPLTGEWIAQAILGHAPLAMEA 362
>gi|77461062|ref|YP_350569.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Pf0-1]
gi|77385065|gb|ABA76578.1| glycine oxidase [Pseudomonas fluorescens Pf0-1]
Length = 366
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V VQTS L + +V+ AG WSG L+ +L L +PV+P KG +++
Sbjct: 185 VVGVQTSTG-LITGDQVVLTAGAWSGELLKNL------DLSLPVEPVKGQMIL------- 230
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + GF+
Sbjct: 231 ----------YKCAADFL-------PSMVLAKGRYAIPRRDGHILIGSTLEHEGFDKTPT 273
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
++ + A E P L D A+ + + GLRP P+G P IG VPG+ ++L
Sbjct: 274 DNALESLKASAVELLPALAD---AEVVGHWA---GLRPGSPEGIPYIGRVPGVDGLWLNC 327
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D AP+A GR
Sbjct: 328 GHYRNGLVLAPASCQLFADVMLGRAPIIDPAPYAPAGR 365
>gi|421613318|ref|ZP_16054404.1| D-amino acid dehydrogenase small subunit [Rhodopirellula baltica
SH28]
gi|408495912|gb|EKK00485.1| D-amino acid dehydrogenase small subunit [Rhodopirellula baltica
SH28]
Length = 419
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 180/466 (38%), Gaps = 124/466 (26%)
Query: 86 IIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IWDLA 143
I+G+GI+G+ A L + L V V+D+ + A GYI H P +E + +A
Sbjct: 12 IVGSGIVGIACA-HYLSEAGLDVTVIDRGTIAGECSHANCGYICPSHALPLTEPGAFSVA 70
Query: 144 LRS---------------NKLWKMLADSLRD-------QGLDPLQVI------------- 168
L+S LWK + + PLQ I
Sbjct: 71 LKSIFNPRSPFRVKPQISPALWKWMLQFAKRCTHRKMLAAGKPLQAILEASMSEYHSVIE 130
Query: 169 ------GWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGED 222
WK+ G L + +T E G+ E + +D L +E +
Sbjct: 131 RLSLDCEWKEEGLLYVLQT---------------ERGM--ESFAKTDRLVSEEFGIPATR 173
Query: 223 SRAAFLP-YDSQLDAMLAVAYI---------EKGNRHFAS--KGRYAEFYHDPVTCLLRS 270
LP +DS L LA A++ +K N +++ + R +F C L+S
Sbjct: 174 IDGINLPKFDSGLKEGLAGAFLYPNDTSVRPDKLNSQWSANLQERGVQFIEK---CELKS 230
Query: 271 --NSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLV 328
G + A++T++ + V A G WS E+ + +PV+P KG+ +
Sbjct: 231 IRKEAGRIVAIETNRGD-FKTDCFVFAMGAWSTKW------ESALQCSVPVQPGKGYSVT 283
Query: 329 LENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFA 388
+E K H+ A H + + P + G L GS +FA
Sbjct: 284 IE-----KPEHSPNHAILFPEHKVGVSP--FDEG----------------LRFGSMMEFA 320
Query: 389 GFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISN-----RKVRIGLRPYMPDGKPVIG 443
G++T + + I +LRD +++ + G RP D P+IG
Sbjct: 321 GYDTSIPRHRIQ-----------QLRDSARPYLVASVDGPAQSQWYGWRPMTWDSLPIIG 369
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
+P LS LATGH LGLSLA T L+ +++ +D AP++
Sbjct: 370 TLPELSNGLLATGHNMLGLSLAPATGRLIGEIITGQQTHLDPAPYS 415
>gi|422598521|ref|ZP_16672781.1| glycine oxidase ThiO [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330988798|gb|EGH86901.1| glycine oxidase ThiO [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 370
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 177/422 (41%), Gaps = 77/422 (18%)
Query: 85 IIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSEI 139
+I+G G+IGL A L +SV ++D+ ++ AG G Y W +P +
Sbjct: 7 VIVGGGVIGLLTAFNL-ASEQVSVVLLDRSGVGQESSWAGGGIVSPLYPW--RYSPA--V 61
Query: 140 WDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA 198
LA S + LA+ L Q G+DP + RT + L + L A
Sbjct: 62 TALAHWSQDFYPHLAERLFAQTGIDPE------------VHRTGLYWLDLDDEQAALEWA 109
Query: 199 GLRAEYLSSSDLLQAEPELMV-GED-SRAAFLP-----YDSQLDAMLAVAYIEKGNRHFA 251
L+S D+ + V GE SRA ++ + +L L A + N
Sbjct: 110 VREKRSLTSVDISAVHDAVPVLGEGYSRAIYMADVANVRNPRLVKSLKAALLAMPNVEIR 169
Query: 252 SKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET 311
+ + F +R S V V T + + +++AAG WSG L++ L
Sbjct: 170 EQCEVSGF--------VREGS--RVSGVSTPSGDVTGDR-VILAAGAWSGELLNTL---- 214
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTA 371
LD+PV+P KG +++ + + +SM +L+ A
Sbjct: 215 --GLDLPVEPVKGQMILYKCASDFL---SSM---------------------VLAKGRYA 248
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
G++++GS+ + GF+ ++ + A E P+L + A+ ++ GL
Sbjct: 249 IPRRDGHILIGSTLEHEGFDKTTTHAALESLKASAIELLPELAN---AEPVAQWA---GL 302
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
RP P+G P IGP+ G ++L GH GL LA + +L+ D++L +D AP+
Sbjct: 303 RPGSPEGIPFIGPLAGFDGLWLNCGHYRNGLVLAPASCQLITDLLLNREPIIDPAPYTPS 362
Query: 492 GR 493
GR
Sbjct: 363 GR 364
>gi|410028630|ref|ZP_11278466.1| glycine/D-amino acid oxidase, deaminating [Marinilabilia sp. AK2]
Length = 415
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 120/280 (42%), Gaps = 44/280 (15%)
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFL-PYDSQLDAMLAVAYIEKGNRHFASKGR 255
+ GL AE LS SD+ EP L V +R A L P D+ L +++K H KG
Sbjct: 161 QHGLDAEVLSPSDIAIIEPNLEV--KARGAVLFPGDAHLSPSNLYNFLKK---HLLGKG- 214
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
+F + N+ +V AV T + +L ++K +++ G WS L L
Sbjct: 215 -VKFLSNRKVLGFEKNAA-KVTAVLTEEGSLLAEK-VILCGGAWSAELAQKL------GF 265
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+P+ KG+ + +N P ++ IL+ A +
Sbjct: 266 KLPMMGGKGYSFMQDN-----------------------QP-EILQASILTEMKVAVSPY 301
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
+ G + + AG + + + I++ +YP + + F K+ GLRP
Sbjct: 302 GPQVRFGGTMEIAGTDESININRVKGIFESINRYYPDFQ----SKFPDKEKIWKGLRPCS 357
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADM 475
PDG P IG PG V+ TGH +G+S+A T +++AD+
Sbjct: 358 PDGVPYIGLAPGYENVWFGTGHGMMGVSMAPATGKILADL 397
>gi|421856467|ref|ZP_16288833.1| D-amino acid dehydrogenase small subunit [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|403188165|dbj|GAB75034.1| D-amino acid dehydrogenase small subunit [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 426
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 177/440 (40%), Gaps = 91/440 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDK---VVPCSGATGAGQ---GYI--WMVHRTP 135
V+++G+G+IG+T A L + V V+D+ + A AGQ GY W P
Sbjct: 3 VVVLGSGVIGVTTA-WYLAQAGHEVTVIDRQPGAALETSAANAGQVSPGYATPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKML------------------ADSLRD--QG 161
I W L++R + +W+ML A+ RD +
Sbjct: 62 LKAIKWMFQKHAPLSIRPDGTSFQIAWMWQMLKNCNIQHYQENKSRMVRIAEYSRDCLKE 121
Query: 162 LDPLQVIGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV 219
L I + +Q G+L + R+ ++ + ++ L EAG+ E L + DL++ EP L
Sbjct: 122 LRKTTGIAYESRQQGTLQLFRSEQQYANAAKDIEVLKEAGVPFELLEAKDLMKVEPALKY 181
Query: 220 GEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE-FYHDPVTCLLRSNSTGEV 276
LP D D L +H A + A + V+ +V
Sbjct: 182 SSHKLTGGLRLPNDETGDCQLF-------TQHLAEMAKAAGVIFKFGVSIEKLVVEADKV 234
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
AVQTS+ L V+A G +S L+ L+ IPV P KG+ L +
Sbjct: 235 TAVQTSEG-LVKADQYVIAMGSFSTPLLRGLIH-------IPVYPLKGYSLTIPI----- 281
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
D T P + +++T D I +G + GFN ++
Sbjct: 282 -------------QDATRAPVSTVLDETYKVAVTRFDDRIR---VGGMAEIVGFNYKLLP 325
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + YP L A F + GLRP PDG P++G LS +FL TG
Sbjct: 326 ERRKTLEMVVNDLYPSAGRLKEATFWT------GLRPMTPDGTPIVGKT-ALSNLFLNTG 378
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG ++A G+ +L++D++
Sbjct: 379 HGTLGWTMACGSGKLLSDLM 398
>gi|302550822|ref|ZP_07303164.1| glycine oxidase ThiO [Streptomyces viridochromogenes DSM 40736]
gi|302468440|gb|EFL31533.1| glycine oxidase ThiO [Streptomyces viridochromogenes DSM 40736]
Length = 389
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 178/429 (41%), Gaps = 74/429 (17%)
Query: 77 SRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG 136
SR T DV++IG GIIGL A + G L+ AVVD P GA G + V
Sbjct: 2 SRTRTSDVLVIGGGIIGLVTAWRA-AGRGLTTAVVDPE-PGGGAAQVAAGMLAAVTELHY 59
Query: 137 SE--IWDLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
E + L L S + + A L + G D +G+++ G+L + ++ L+E
Sbjct: 60 GEQTLLGLNLASARRYPAFAAELTELTGHD----LGYRRCGTLAVALDADDRAHLRELHA 115
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAM-LAVAYIEKGNRHFA 251
++GL +++LS + + EP L G R + D Q+D LA A + A
Sbjct: 116 LQQQSGLDSQWLSGRECRRLEPMLAPG--VRGGLRVDGDHQIDPRRLAGALV-------A 166
Query: 252 SKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLM---HDLL 308
+ R +H + L + + V T+ T +V+A G SG L D+L
Sbjct: 167 ACERSGVVFHRVLAERL-TVAGDRATGVVTADGTELGAGQVVLAGGSLSGRLAGVPKDVL 225
Query: 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSIS 368
PV+P KG ++ L HG LS +
Sbjct: 226 --------PPVRPVKGQVVRLTMPE--------------------------RHGPFLSRT 251
Query: 369 MTATTD---------VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLA 419
+ A G LV+G++ + G++T V + + + A E P + +L L
Sbjct: 252 VRAVVRGSHVYLVPRASGELVVGATSEETGWDTTVTAGGVYELLRDAHELVPGITELPLT 311
Query: 420 DFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN 479
+ R GLRP PD P++GP GL + LATGH G+ L T + +A + T
Sbjct: 312 E------TRAGLRPGSPDNAPLLGPT-GLEGLLLATGHYRNGVLLTPVTGDALAHALTTG 364
Query: 480 PLKVDSAPF 488
L ++ PF
Sbjct: 365 ELPEEARPF 373
>gi|378827612|ref|YP_005190344.1| putative D-amino-acid dehydrogenase, FAD dependent [Sinorhizobium
fredii HH103]
gi|365180664|emb|CCE97519.1| putative D-amino-acid dehydrogenase, FAD dependent [Sinorhizobium
fredii HH103]
Length = 428
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 172/458 (37%), Gaps = 104/458 (22%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IW- 140
V+++GAGIIG TIA +L V +V++ GA+ I + P S +W
Sbjct: 21 VVVVGAGIIGTTIAYELQRRGK-GVVLVERDPDGKGASYGNMASIAVTEFMPASRPSVWA 79
Query: 141 -----------DLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVML 188
+ +R + + ++ LR + P +V + G++L GR E+L L
Sbjct: 80 QMPKWLLDPEGPVRIRPSYMPRLTPWFLRFLEASRPSRVRELEAAGAVLCGRVYEDLTPL 139
Query: 189 ----------------------------KERVKQLCEAGLRAEYLSSSDLLQAEPEL--- 217
+E ++ L G R E L + + EP L
Sbjct: 140 LQATGLSDMLTEDGCLSLYADEAEFRADREHIEVLERFGFRHEVLGGNAIRDLEPALTSK 199
Query: 218 ----MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST 273
++ D+R+ PY QL L ++ G R +G A F +S
Sbjct: 200 IAKAVLFPDNRSIRDPY--QLLLKLREKFMSLGGR--IEQGEAARF-----------DSG 244
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
V AV+ + IV+ AG ++G L L G + LE
Sbjct: 245 DRVSAVRLKDGRSIAASEIVLCAGAYTGKLARLL----------------GEPMPLET-- 286
Query: 334 SLKLNHASMEAGYVGHHDLTLHPG-QVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNT 392
E GY H + PG + H I T G + +G + + AG +
Sbjct: 287 ---------ERGY---HTQIMAPGISMRHSIIWPARAFMVTPTAGGIRVGGTVEMAGLDA 334
Query: 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVF 452
+ + KRA E P+LR + +G RP +PD PVIG VF
Sbjct: 335 APDYRRAKVLVKRAQEALPELR-------VEKATEWMGHRPALPDTVPVIGASAKHRGVF 387
Query: 453 LATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
ATGH LGL+ A T L+AD+V +D P+ +
Sbjct: 388 YATGHGHLGLTYAATTGRLIADLVTGAQPPIDLKPYRI 425
>gi|440715770|ref|ZP_20896299.1| D-amino acid dehydrogenase small subunit [Rhodopirellula baltica
SWK14]
gi|436439256|gb|ELP32726.1| D-amino acid dehydrogenase small subunit [Rhodopirellula baltica
SWK14]
Length = 419
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 180/466 (38%), Gaps = 124/466 (26%)
Query: 86 IIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IWDLA 143
I+G+GI+G+ A L + L V V+D+ + A GYI H P +E + +A
Sbjct: 12 IVGSGIVGIACA-HYLSEAGLDVTVIDRGTIAGECSHANCGYICPSHALPLTEPGAFSVA 70
Query: 144 LRS---------------NKLWKMLADSLRD-------QGLDPLQVI------------- 168
L+S LWK + + PLQ I
Sbjct: 71 LKSIFNPRSPFRVKPQISPALWKWMLQFAKRCTHRKMLAAGKPLQAILEASMSEYHSVIE 130
Query: 169 ------GWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGED 222
WK+ G L + +T E G+ E + +D L +E +
Sbjct: 131 RLSLDCEWKEEGLLYVLQT---------------ERGM--ESFAKTDRLVSEEFGIPATR 173
Query: 223 SRAAFLP-YDSQLDAMLAVAYI---------EKGNRHFAS--KGRYAEFYHDPVTCLLRS 270
LP +DS L LA A++ +K N +++ + R +F C L+S
Sbjct: 174 IDGINLPKFDSGLKEGLAGAFLYPNDTSVRPDKLNSQWSANLQERGVQFIEK---CELKS 230
Query: 271 --NSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLV 328
G + A++T++ + V A G WS E+ + +PV+P KG+ +
Sbjct: 231 IRKEAGRIVAIETNRGD-FKTDCFVFAMGAWSTKW------ESALQCSVPVQPGKGYSVT 283
Query: 329 LENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFA 388
+E K H+ A H + + P + G L GS +FA
Sbjct: 284 IE-----KPEHSPNHAILFPEHKVGVSP--FDEG----------------LRFGSMMEFA 320
Query: 389 GFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISN-----RKVRIGLRPYMPDGKPVIG 443
G++T + + I +LRD +++ + G RP D P+IG
Sbjct: 321 GYDTSIPRHRIQ-----------QLRDSARPYLVASVDGPAQSQWYGWRPMTWDSLPIIG 369
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
+P LS LATGH LGLSLA T L+ +++ +D AP++
Sbjct: 370 TLPELSNGLLATGHSMLGLSLAPATGRLIGEIITGQQTHLDPAPYS 415
>gi|419829394|ref|ZP_14352880.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-1A2]
gi|419832364|ref|ZP_14355826.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-61A2]
gi|422916565|ref|ZP_16950901.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-02A1]
gi|423818083|ref|ZP_17715504.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-55C2]
gi|423850042|ref|ZP_17719293.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-59A1]
gi|423879165|ref|ZP_17722898.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-60A1]
gi|423996987|ref|ZP_17740248.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-02C1]
gi|424015691|ref|ZP_17755536.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-55B2]
gi|424018630|ref|ZP_17758428.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-59B1]
gi|424624172|ref|ZP_18062647.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-50A1]
gi|424628668|ref|ZP_18066971.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-51A1]
gi|424632703|ref|ZP_18070816.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-52A1]
gi|424635791|ref|ZP_18073810.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-55A1]
gi|424639706|ref|ZP_18077600.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-56A1]
gi|424647767|ref|ZP_18085441.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-57A1]
gi|443526553|ref|ZP_21092632.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-78A1]
gi|341640042|gb|EGS64645.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-02A1]
gi|408015071|gb|EKG52669.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-50A1]
gi|408020529|gb|EKG57833.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-52A1]
gi|408026301|gb|EKG63314.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-56A1]
gi|408026636|gb|EKG63633.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-55A1]
gi|408036310|gb|EKG72749.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-57A1]
gi|408058436|gb|EKG93236.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-51A1]
gi|408620979|gb|EKK93982.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-1A2]
gi|408636396|gb|EKL08544.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-55C2]
gi|408643385|gb|EKL15110.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-60A1]
gi|408644509|gb|EKL16193.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-59A1]
gi|408651008|gb|EKL22264.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-61A2]
gi|408854040|gb|EKL93810.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-02C1]
gi|408861662|gb|EKM01235.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-55B2]
gi|408869636|gb|EKM08930.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-59B1]
gi|443455116|gb|ELT18904.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-78A1]
Length = 420
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPAQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 193 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGQKIIGVQTDLG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 244 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 284 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 390 GSASILAD-VLTH 401
>gi|440739033|ref|ZP_20918555.1| putative oxidoreductase [Pseudomonas fluorescens BRIP34879]
gi|440380405|gb|ELQ16972.1| putative oxidoreductase [Pseudomonas fluorescens BRIP34879]
Length = 390
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 36/202 (17%)
Query: 292 IVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHD 351
+V+AAG WSG L+ L L +PV+P KG +++ + +SM
Sbjct: 221 VVLAAGAWSGELLGKL------GLALPVEPVKGQMIL---YRCAPDFLSSM--------- 262
Query: 352 LTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYP 411
+L+ A G++++GS+ + AGF+ Q ++ + A E P
Sbjct: 263 ------------VLAKGRYAIPRRDGHILIGSTLEHAGFDKTPTQYALESLKASAEELIP 310
Query: 412 KLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAEL 471
L D A+ + + GLRP P+G P IG VPG ++L GH GL LA + +L
Sbjct: 311 GLAD---AEVVGHWA---GLRPGSPEGIPYIGEVPGFKGLWLNCGHYRNGLVLAPASCQL 364
Query: 472 VADMVLTNPLKVDSAPFAVQGR 493
AD++L +D AP+A GR
Sbjct: 365 FADLLLERRPIIDPAPYAPAGR 386
>gi|398796645|ref|ZP_10556132.1| glycine/D-amino acid oxidase, deaminating [Pantoea sp. YR343]
gi|398202647|gb|EJM89486.1| glycine/D-amino acid oxidase, deaminating [Pantoea sp. YR343]
Length = 433
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 127/308 (41%), Gaps = 44/308 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++ + + L +AG+ E L + L EP L L
Sbjct: 133 RQGGTLQLFRTQQQFESASKDIAVLRDAGVPYELLEAHQLKNVEPALAATAHKLTGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + + A+ Y+ V LLR + + V+ +
Sbjct: 193 PNDETGDCQLFTQRLAE----MAAAAGVTFRYNTSVDQLLREGN--RIYGVKCGDEVI-K 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S +L+ D +L IPV P KG+ L + N+
Sbjct: 246 ADAYVVAFGSYSTALLKD-------ILAIPVYPLKGYSLTIPIKNA-------------- 284
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
P + +++T D I +G + GFNT++ + + +
Sbjct: 285 ----DAAPVSTILDETYKVAVTRFDDRI---RVGGMAEIVGFNTKLLPARRETLEMVVRD 337
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
YP+ F+ GLRP PDG P++G P LS ++L TGH LG ++A G+
Sbjct: 338 LYPE------GGFVEQATFWTGLRPMTPDGTPIVGRTP-LSNLYLNTGHGTLGWTMACGS 390
Query: 469 AELVADMV 476
+L+AD++
Sbjct: 391 GQLLADLI 398
>gi|229530086|ref|ZP_04419476.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae 12129(1)]
gi|229333860|gb|EEN99346.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae 12129(1)]
Length = 421
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 134 RQRGTLQVFRDEKQLAAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 193
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + SK + F+ D C ++ ++ VQT L
Sbjct: 194 PDDETGDCYLFCQQLTE-----LSKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 244
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 245 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 284
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 285 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 337
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 338 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 390
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 391 GSASILAD-VLTH 402
>gi|398799412|ref|ZP_10558703.1| glycine/D-amino acid oxidase, deaminating [Pantoea sp. GM01]
gi|398098828|gb|EJL89108.1| glycine/D-amino acid oxidase, deaminating [Pantoea sp. GM01]
Length = 433
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 128/308 (41%), Gaps = 44/308 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++ + + L +AG+ E L + L EP L L
Sbjct: 133 RQGGTLQLFRTQQQFASASKDIAVLRDAGVPYELLEAHQLKNVEPALAATAHKLTGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + + A+ Y+ V LLR + + V+ + +
Sbjct: 193 PNDETGDCQLFTQRLAE----MAAAAGVTFRYNTSVDQLLREGN--RIYGVKCGEEVI-K 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S +L+ D +L IPV P KG+ L + N+
Sbjct: 246 ADAYVVAFGSYSTALLKD-------ILAIPVYPLKGYSLTIPIKNA-------------- 284
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
P + +++T D I +G + GFNT++ + + +
Sbjct: 285 ----DAAPVSTILDETYKVAVTRFDDRI---RVGGMAEIVGFNTKLLPARRETLEMVVRD 337
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
YP+ ++ GLRP PDG P++G P LS ++L TGH LG ++A G+
Sbjct: 338 LYPE------GGYVEQATFWTGLRPMTPDGTPIVGRTP-LSNLYLNTGHGTLGWTMACGS 390
Query: 469 AELVADMV 476
+L+AD++
Sbjct: 391 GQLLADLI 398
>gi|317048430|ref|YP_004116078.1| FAD dependent oxidoreductase [Pantoea sp. At-9b]
gi|316950047|gb|ADU69522.1| FAD dependent oxidoreductase [Pantoea sp. At-9b]
Length = 433
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 129/308 (41%), Gaps = 44/308 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++ + + L EAG+ + L S +L EP L L
Sbjct: 133 RQGGTLQLFRTRQQFESASKDIAVLKEAGVPYQLLESHELANVEPALAATAHKLTGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + A + PV LLR + + V+ +
Sbjct: 193 PNDETGDCQLFTQRLAA----MAQAAGVTFRFDTPVDHLLREGN--RIYGVKCGDEVI-K 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S +L+ D ++ IPV P KG+ L + N+
Sbjct: 246 ADAYVVAFGSYSTALLKD-------IVTIPVYPLKGYSLTIPIKNA-------------- 284
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
P + +++T D I +G + GFNT++ + + ++
Sbjct: 285 ----AAAPVSTILDETYKVAVTRFDDRI---RVGGMAEIVGFNTKLLPARRETLEMVVSD 337
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
YP+ + A F S GLRP PDG P++G P +S ++L TGH LG ++A G+
Sbjct: 338 LYPEGGYVEQATFWS------GLRPMTPDGTPIVGRTP-ISNLYLNTGHGTLGWTMACGS 390
Query: 469 AELVADMV 476
+L+AD++
Sbjct: 391 GQLLADLI 398
>gi|422674219|ref|ZP_16733574.1| FAD dependent oxidoreductase [Pseudomonas syringae pv. aceris str.
M302273]
gi|330971948|gb|EGH72014.1| FAD dependent oxidoreductase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 367
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
+ VQT + + +++AAG WSG L+ L L++PV+P KG +++ + +
Sbjct: 184 ISGVQTPAGDITGDR-VILAAGAWSGELLKTL------GLELPVEPVKGQMILYKCASDF 236
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+SM +L+ A G++++GS+ + GF+
Sbjct: 237 L---SSM---------------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKTTT 272
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
Q ++ + A E P L + +S GLRP P+G P IGP+ G ++L
Sbjct: 273 QAALESLKASAVELLPPLTH---GEPVSQWA---GLRPGSPEGIPFIGPLDGFDGLWLNC 326
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L+ D++L +D AP+A GR
Sbjct: 327 GHYRNGLVLAPASCQLITDLLLEREPIIDPAPYAPAGR 364
>gi|229523396|ref|ZP_04412803.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae TM
11079-80]
gi|229339759|gb|EEO04774.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae TM
11079-80]
Length = 439
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 137/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 152 RQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPAQEKLVGGLWL 211
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 212 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGQKIIGVQTDLGLL 263
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
+ A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 264 KA-DAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 302
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 303 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 355
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 356 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 408
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 409 GSASILAD-VLTH 420
>gi|427722788|ref|YP_007070065.1| FAD dependent oxidoreductase [Leptolyngbya sp. PCC 7376]
gi|427354508|gb|AFY37231.1| FAD dependent oxidoreductase [Leptolyngbya sp. PCC 7376]
Length = 365
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 171/401 (42%), Gaps = 48/401 (11%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIW-MVHRTPGSEI 139
T V+I+GAGI+G IA +L + + VA++D P G+TGA G + ++ R
Sbjct: 2 TQKVVILGAGIVGAAIAYELSLRPEFKVAILDTQQPTQGSTGAALGVLMGIISRKTKGRA 61
Query: 140 WDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
W L RS + + +L D L G + G L + +L L+ ++ +AG
Sbjct: 62 WQLRRRSMERFPVLLDELAVAGAP----VPHNSHGILKLFDETTDLTKLERLQQKRHDAG 117
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRYAE 258
+ E + P++ + A + P D Q+ + LA + +E ++ G Y+
Sbjct: 118 WQLELWDQAKTETQCPQISSNICAGAVYSPQDFQVQPIPLARSLLEVATKN----GLYSH 173
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
F P T V S + ++ +++AAG S + LL D
Sbjct: 174 FDIAPPTLEFAQQKCVAV----NSGDRRWTCDWLIIAAGLGSLEITKPLLD------DFQ 223
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
+K G ++ + + + A + V ++D+ + P + + + + D G+
Sbjct: 224 MKSVLGQAFHVKLPDGKQPDFAPV----VSYNDIHVVP--LGNNEFWVGATVEFPDEKGH 277
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L E ++ +++++W+ A FYP L+ + S ++ R P+G
Sbjct: 278 L-------------EADKALMEKVWQGAIAFYPALKHAEILRHWSGKRPR-------PEG 317
Query: 439 K--PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
+ PV+ P+ + LATGH G+ LA TA + D +L
Sbjct: 318 QGAPVLQPLKNYQNILLATGHYRNGVLLAPATALKIRDWLL 358
>gi|261856962|ref|YP_003264245.1| D-amino-acid dehydrogenase [Halothiobacillus neapolitanus c2]
gi|261837431|gb|ACX97198.1| D-amino-acid dehydrogenase [Halothiobacillus neapolitanus c2]
Length = 439
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 136/315 (43%), Gaps = 42/315 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL-MVGEDSRAAF-L 228
+ G+L + R+ ++L + + L E G+ E L + + AEP L +V E L
Sbjct: 133 RTQGTLQLFRSQKQLDSASKDIAVLEECGVPYELLDRAGCVGAEPALGLVSEKIVGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D + +E R RY + P++ L++N+ + +++ K
Sbjct: 193 PGDETGDCHMFTTALEAEARKLGVTFRY----NFPISRFLKTNN--RITGIESPKGERVE 246
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
VVA G +S L+ L +DIPV P KG+ L ++ + HA
Sbjct: 247 GDQFVVALGSYSRQLLKTL------NIDIPVYPVKGYSL------TVPITHADAA----- 289
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
P + +++T + I LG + AGF+ + + + +
Sbjct: 290 -------PVSTIMDETYKVAITRFDNRI---RLGGMAELAGFDLGLNPRRRETLEMVVGD 339
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ ++ A F + GLRP PDG P+IG G ++L TGH LG +++ G+
Sbjct: 340 LFPQGGNVEDATFWT------GLRPMTPDGTPIIGAT-GYDNLWLNTGHGTLGWTMSCGS 392
Query: 469 AELVADMVLTNPLKV 483
A ++AD++ P +
Sbjct: 393 AHVLADLLAGRPTAI 407
>gi|359464088|ref|ZP_09252651.1| glycine oxidase ThiO [Acaryochloris sp. CCMEE 5410]
Length = 372
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 167/410 (40%), Gaps = 76/410 (18%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIW-MVHRTPGSEI 139
T +V++IG G+IGL A +L + V V+ + + C AT + G + R +
Sbjct: 4 TTEVLVIGGGLIGLATAVEL-AQQGVEVTVITRKL-CEAATQSAAGMLAPQAERLSSGPL 61
Query: 140 WDLALRSNKLWKMLADSLRD-QGLD----PLQVIGWKQTGSLLIGRTPEELVMLKERVKQ 194
DL LRS L+ +L + GLD P ++ L+ + + ++ E
Sbjct: 62 LDLCLRSRSLYADWVQTLENLTGLDAQYWPCGILAPLYEADLIDQNSEPQFILDTEH--- 118
Query: 195 LCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASK 253
++L S L ++ +L + D R + P D+Q+D + +H
Sbjct: 119 --------QWLDYSAL--SKQQLGLSSDVRGGWWFPADAQVDNQALAKVLSAAAQHLG-- 166
Query: 254 GRYAEFYHDPVTCLLRSN-----STGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLL 308
VT L N G ++ + + + ++A G WSG L
Sbjct: 167 ----------VTILEGVNVNTIKHQGNRICQISTPTSHWQAEVYILAMGAWSGDL----- 211
Query: 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSIS 368
L IP++P KG +L + +++ +H +V +
Sbjct: 212 ------LPIPIQPCKGQML---SVHAITPSHGEQPLQHV----------------LFGTE 246
Query: 369 MTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR 428
+ G +++G++ + GF + I + A +P+++ + L F S
Sbjct: 247 VYLVPRRNGRILIGATNENVGFQSHNTPLGIQALLAAAIRLFPQIQHMILEKFWS----- 301
Query: 429 IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLT 478
G RP PD +P++G P +FLATGH G+ LA T +++A+++L+
Sbjct: 302 -GFRPTTPDQEPILGTSP-YENLFLATGHHRNGILLAPITGKIMANLILS 349
>gi|409417470|ref|ZP_11257519.1| FAD dependent oxidoreductase [Pseudomonas sp. HYS]
Length = 367
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
+ V+T+ + + +V+ AG WSG DLLR + L++PV+P KG +++ +
Sbjct: 183 ISGVETATGPIQADH-VVLTAGAWSG----DLLRP--LGLELPVEPVKGQMILYKCAEDF 235
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+ +L+ A G++++GS+ + AG++
Sbjct: 236 LPS------------------------MVLAKGRYAIPRRDGHILVGSTLEHAGYDKTPT 271
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+ ++ + A E P L D A +++ GLRP P+G P IG VPG + ++L
Sbjct: 272 EEALESLKASAVELLPALAD---ATPVAHWA---GLRPGSPEGIPYIGEVPGYAGLWLNC 325
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D AP+A GR
Sbjct: 326 GHYRNGLVLAPASCQLFADLLLGREPMIDPAPYAPAGR 363
>gi|440747671|ref|ZP_20926927.1| D-amino acid dehydrogenase small subunit [Mariniradius
saccharolyticus AK6]
gi|436483847|gb|ELP39875.1| D-amino acid dehydrogenase small subunit [Mariniradius
saccharolyticus AK6]
Length = 414
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 146/336 (43%), Gaps = 50/336 (14%)
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
+L+L S L++ D+ QG D LQ++ + G +++ +T E E + GL
Sbjct: 110 NLSLLSKSLYQQFRDA--HQGTD-LQML---EKGLMMLYQTAEVEKEEMEFAHLARQHGL 163
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFL-PYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
AE L+ +D+ + EP L V ++R A L P D+ L +++K H S+G
Sbjct: 164 EAEVLTKADIQRIEPNLEV--NARGAVLFPGDAHLSPSALYGFLKK---HLKSRGV---V 215
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
+ + + G+V A+ T + +K ++ G WS L L + +P+
Sbjct: 216 FKSLLKVKGFESKAGKVTALITDGERIEGEK-FILCGGAWSAELAGML------GISMPM 268
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
KG+ + N P ++ IL+ A + +
Sbjct: 269 MGGKGYSFLQNN-----------------------QP-EIRQASILTEKKVAVSPYGHQV 304
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
G + + AG + + + I++ ++YP + + F + ++ GLRP PDG
Sbjct: 305 RFGGTMEIAGTDERINMNRVRGIFESINKYYPGFQ----SKFPNEAEIWKGLRPCSPDGL 360
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADM 475
P IGP G V++ +GH +G+S+A T +++ D+
Sbjct: 361 PYIGPAVGYQNVWIGSGHGMMGISMAPATGKILTDL 396
>gi|340619975|ref|YP_004738428.1| D-amino acid dehydrogenase [Zobellia galactanivorans]
gi|339734772|emb|CAZ98149.1| D-amino acid dehydrogenase [Zobellia galactanivorans]
Length = 416
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 132/306 (43%), Gaps = 42/306 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPY 230
++ G L++ +T E + KE + GL L L + EP + + D++ A + Y
Sbjct: 135 ERKGLLMLYKTKEAYLHEKEVADKASFLGLEVSELDQKQLARLEPNVAI--DAKGA-IHY 191
Query: 231 DSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKK 290
+ ++ K H G + V ++ N ++ VQTSK Y+
Sbjct: 192 ECD-GHTTPTQFMPKMLDHLRKVGVEIRLNEEVVDLKVKDN---HIQEVQTSKGN-YTAD 246
Query: 291 AIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHH 350
+V+AAG WSG + +I LD+P++ KG+ +N A
Sbjct: 247 EVVLAAGSWSGKIAR------KINLDLPLQGGKGY----------SINVA---------- 280
Query: 351 DLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFY 410
P ++ IL S A T + G + +F+G N + + I K A FY
Sbjct: 281 ----RPTGISIPAILMESNMAVTPMQGFTRFAGTMEFSGLNDHIRKERAVAIAKGAHSFY 336
Query: 411 PKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAE 470
P + D+ + I+N K GLRP PDG P IG L + ATGH +G SL T +
Sbjct: 337 PTV-DINDNE-IANAKT--GLRPVSPDGLPYIGRSNKLKNLTFATGHAMMGWSLGPVTGK 392
Query: 471 LVADMV 476
LV++++
Sbjct: 393 LVSEII 398
>gi|152974442|ref|YP_001373959.1| glycine oxidase ThiO [Bacillus cytotoxicus NVH 391-98]
gi|152023194|gb|ABS20964.1| glycine oxidase ThiO [Bacillus cytotoxicus NVH 391-98]
Length = 369
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 172/404 (42%), Gaps = 65/404 (16%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI-----WMVHRTPG 136
+DV IIG G+IG ++A L VA+V+K S A+ A G + W V+
Sbjct: 5 YDVAIIGGGVIGSSVA-HFLAERSCHVAIVEKQRVASEASKAAAGLLGVQAEWDVY---- 59
Query: 137 SEIWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQL 195
+ +++LA S ++ LA +LR++ G+D IG+++ G I + EE ++ +
Sbjct: 60 NPLFELARESRAIFPQLAKALREKTGID----IGYEEKGIYRIAQNEEEKTRIRNIMNWQ 115
Query: 196 CEAGLRAEYLSSSDLLQAEPEL---MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS 252
E G + +L+ +L Q EP L ++G A + P D + A + K H A+
Sbjct: 116 QETGEESYFLTGDELRQKEPFLSSSIIG----AVYYPKDGHVIA----PELTKAFAHSAA 167
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312
+ Y +R V + TS+ + +K +V+A G WS L+ R
Sbjct: 168 ISG-TDIYEQTEVFDIRVEKN-RVCGIVTSEGFISCEK-VVIAGGSWSTKLLQYFHR--- 221
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
D P KG ++ ++++ L + Y+ P +
Sbjct: 222 ---DWGTYPVKGEVVAVKSYKPLVRAPIFQDRFYIA-------PKRG------------- 258
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G V+G++ + FN V+ I I +RA P L+D A++ GLR
Sbjct: 259 ----GRYVIGATMKPHTFNKSVQPKSIISILERAYSILPALKD---AEW---ETAWAGLR 308
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
P P +G + ++ TGH G+ L+ + + +AD++
Sbjct: 309 PQSNHDVPYMGEHEEIKGLYACTGHYRNGILLSPISGQYMADII 352
>gi|75763885|ref|ZP_00743527.1| Sarcosine oxidase beta subunit [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74488629|gb|EAO52203.1| Sarcosine oxidase beta subunit [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 128
Score = 75.9 bits (185), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
N ++GSSR+F GF+T + +I I RA FYPK+ D+ + + GLRP+ D
Sbjct: 12 NFLIGSSREFVGFHTRINNEVIKCIANRAIRFYPKMADMMVI------RSYAGLRPWTED 65
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
P+I V + F+A GHEG G+SLA T +++ +++
Sbjct: 66 HLPIISRVEHIPNYFIAAGHEGDGISLAAVTGKVIEELL 104
>gi|440724237|ref|ZP_20904567.1| FAD dependent oxidoreductase [Pseudomonas syringae BRIP34876]
gi|440728943|ref|ZP_20909142.1| FAD dependent oxidoreductase [Pseudomonas syringae BRIP34881]
gi|440358174|gb|ELP95564.1| FAD dependent oxidoreductase [Pseudomonas syringae BRIP34876]
gi|440360344|gb|ELP97622.1| FAD dependent oxidoreductase [Pseudomonas syringae BRIP34881]
Length = 367
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
+ VQT + + +++AAG WSG L+ L L++PV+P KG +++ + +
Sbjct: 184 ISGVQTPAGDITGDQ-VILAAGAWSGELLKTL------GLELPVEPVKGQMILYKCASDF 236
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+SM +L+ A G++++GS+ + GF+
Sbjct: 237 L---SSM---------------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKTTT 272
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
Q ++ + A E P L A+ ++ GLRP P+G P IGP+ G ++L
Sbjct: 273 QAALESLKASAVELLPPLAH---AEPVAQWA---GLRPGSPEGIPFIGPLGGFDGLWLNC 326
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L+ D++L +D AP+A GR
Sbjct: 327 GHYRNGLVLAPASCQLITDLLLEREPIIDPAPYAPTGR 364
>gi|402491632|ref|ZP_10838420.1| putative D-amino acid dehydrogenase [Rhizobium sp. CCGE 510]
gi|401810031|gb|EJT02405.1| putative D-amino acid dehydrogenase [Rhizobium sp. CCGE 510]
Length = 416
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 180/461 (39%), Gaps = 107/461 (23%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IW- 140
++++GAGIIG+ IA +L +V +VDK P GA+ I + P S IW
Sbjct: 8 LVVVGAGIIGVVIAYELQRRGQ-AVLLVDKAAPGMGASYGNMASIAVTEFMPASRPGIWA 66
Query: 141 -----------DLALRSNKLWKMLADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEEL-VM 187
+ +R L K+ LR P ++ + G+ L GR E+L V+
Sbjct: 67 QMPKWLLDPEGPVRIRPGYLPKLAPWFLRFLAASRPSKLRELEAAGAALCGRVYEDLDVL 126
Query: 188 LKE----------------------RVKQ-----LCEAGLRAEYLSSSDLLQAEPELM-- 218
LKE RV + L G R E L + + EP L
Sbjct: 127 LKETGLTHMLTADGCLSLYTDEAEFRVDREHIDILERFGFRHEILGGNAIRDLEPALTTK 186
Query: 219 VGE-----DSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS--KGRYAEFYHDPVTCLLRSN 271
VG+ D+R+ PY L A EK S +G F N
Sbjct: 187 VGKAVLFPDNRSITDPYK------LVTALTEKFQAFGGSIVEGDVVGF---------EQN 231
Query: 272 STGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLEN 331
G V A++ + + +V+AAG ++ + LLRE IP++ +G+
Sbjct: 232 EAG-VSALRLADGRSVAADKVVLAAGAFTARV-SALLRE-----HIPLETERGY------ 278
Query: 332 FNSLKLNHASMEAGYVGHHDLTLHPG-QVNHGQILSISMTATTDVIGNLVLGSSRQFAGF 390
H + PG + H I T G + +G + + AG
Sbjct: 279 ------------------HTQIMEPGISMRHSIIWPARAFMVTPTAGGIRVGGTVEMAGL 320
Query: 391 NTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSK 450
+ + + KRA E P+L+ + ++ +G RP +PD PV+GP
Sbjct: 321 DAPPDYRRAKILVKRAREALPELKAEGVTEW-------MGHRPALPDTVPVMGPSAKRRN 373
Query: 451 VFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
V+ ATGH LGL+ A T L+AD+V+ VD P+ V
Sbjct: 374 VWYATGHGHLGLTYAATTGRLMADLVMGVQPPVDMKPYRVD 414
>gi|322371215|ref|ZP_08045767.1| FAD dependent oxidoreductase [Haladaptatus paucihalophilus DX253]
gi|320549205|gb|EFW90867.1| FAD dependent oxidoreductase [Haladaptatus paucihalophilus DX253]
Length = 376
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 172/423 (40%), Gaps = 66/423 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI--WMVHRTPGSEIW 140
D I++G GI+G ++A L D+ +VD+ AT AG G I RT +
Sbjct: 3 DAIVVGGGIVGASVAYHL-ARKDVDTLLVDRH-DTGRATDAGAGIISPATSSRTASDRWF 60
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELV---MLKERVKQLCE 197
+ AL + + L + L ++ G+ L + +E+ ER+++ E
Sbjct: 61 EFALDAAAYYPELVEHLENE---QDGKTGYSDCSLLSVAVGEDEVPEYDAASERIRERQE 117
Query: 198 -----AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYD--SQLDA-MLAVAYIEKGNRH 249
A E +SSS+ P L RA YD +++DA A + G H
Sbjct: 118 KYDQPAPGTTEEISSSEAQSRYPPLAETRRCRA----YDGAARVDARTFTGALLRAGESH 173
Query: 250 FASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLR 309
+ VT + N G V V+T+ Y A+ VA G WS L
Sbjct: 174 GLT------VLDGDVTRIDHEN--GAVTGVETTDGGRYESDAVAVAGGAWSPRFAESL-- 223
Query: 310 ETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM 369
+ IPV+P++G ++ L + + + + + GH+ M
Sbjct: 224 ----GVSIPVEPQRGQIIHL-DLGETDTSSWPILSPFHGHY------------------M 260
Query: 370 TATTDVIGNLVLGSSRQF-AGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR 428
D + +G++R+ +GF + + A P L D + +VR
Sbjct: 261 VPWPD--NRVAVGATREVGSGFAPHTTAAGVHEVLGEALRVAPGLADAEI------DEVR 312
Query: 429 IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
+GLRP D PV+G VP + V LATGH GL L + +LVAD + + +++ F
Sbjct: 313 VGLRPRSADQLPVLGAVPTVEGVHLATGHGATGLQLGPYSGKLVADEMRGESVDIET--F 370
Query: 489 AVQ 491
+V+
Sbjct: 371 SVE 373
>gi|226943319|ref|YP_002798392.1| FAD-dependent glycine oxidase [Azotobacter vinelandii DJ]
gi|226718246|gb|ACO77417.1| FAD-dependent glycine oxidase [Azotobacter vinelandii DJ]
Length = 363
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 37/220 (16%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
G + V T L + + +VVAAG WSG L+ L L++PVKP KG +++
Sbjct: 179 GRIVGVSTPSGDLRADR-VVVAAGAWSGKLLATL------GLELPVKPMKGQMIL----- 226
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
Y D +++ A G++++GS+ + GF+
Sbjct: 227 ------------YKCAEDFLPR-------MVMADGRYAIPRRDGHILVGSTLEDVGFDKT 267
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ + + A P L A+ + K GLRP P+G P IGPVPG ++L
Sbjct: 268 PTEDALASLKASAEALLPALAG---AEVV---KHWAGLRPGSPEGIPYIGPVPGCEGLWL 321
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D AP+A GR
Sbjct: 322 NCGHFRNGLVLAPASCQLFADLLLEREPIIDPAPYAPAGR 361
>gi|127513288|ref|YP_001094485.1| D-amino-acid dehydrogenase [Shewanella loihica PV-4]
gi|126638583|gb|ABO24226.1| D-amino-acid dehydrogenase [Shewanella loihica PV-4]
Length = 446
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 184/466 (39%), Gaps = 92/466 (19%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIW---- 129
T ++ DV +IGAG++GL A L + SV V+DK +GA+ G+
Sbjct: 21 TCAASTQNADVTVIGAGVVGLANAIAL-QQAGFSVRVIDKQGVAAGASFGNAGHFATEQM 79
Query: 130 -------MVHRTPGSEI------------------WDLALRSNKLWKMLA-DSLRDQGLD 163
M+ + PG + W + N L A +S + L+
Sbjct: 80 FPLADPAMLFKLPGMLLDPLGPFRIQPRYFLKALPWFMRFLVNMLPARRAHNSAAIKALN 139
Query: 164 PLQVIGWKQ-------------TGSLLI-GRTPEELVMLKERVKQLCEAGLRAEYLSSSD 209
+ W+Q GSLL+ +TP + ++ K +AG+ + LS +
Sbjct: 140 QKSIQAWQQLVSECGCSELLKLEGSLLVFEQTP--FIEVERVYKSYRDAGVAVKLLSGEE 197
Query: 210 LLQAEPELMVGED-----SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPV 264
+ EP+L + ++ P ++L LA + + G AE
Sbjct: 198 VRTLEPDLSPNINHGLWFTQVGHTPDPAELCHRLATQFEKLGGELV-----IAEVIQLAA 252
Query: 265 TCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKG 324
C + ++ + V + Y ++++AG WS L L +P++ +G
Sbjct: 253 EC--KGDNKEKGVNVSVASGVTYQSDKLLLSAGAWSKPLAQQL------GFKVPLETERG 304
Query: 325 HLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSS 384
+ L++ + L+ AS E ++ + P +N G L+ +
Sbjct: 305 YHLMMPQQSRLQRPVASFERKFI------ITP--MNRGTCLA----------------GT 340
Query: 385 RQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGP 444
+F G + + D + A P D+ + S + +G RP +PD PV+G
Sbjct: 341 VEFGGLKAPLIEARADCLLPHAKALLP---DVLASAKTSQGERWMGFRPSLPDSLPVLGA 397
Query: 445 VPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
P K+F A GH+ LGLS A +A+L+A+ + + VD P+ +
Sbjct: 398 SPKSDKIFFAFGHQHLGLSWAAFSAQLMAETIKGEEVTVDMTPYRI 443
>gi|383455689|ref|YP_005369678.1| glycine oxidase ThiO [Corallococcus coralloides DSM 2259]
gi|380734478|gb|AFE10480.1| glycine oxidase ThiO [Corallococcus coralloides DSM 2259]
Length = 371
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 155/388 (39%), Gaps = 62/388 (15%)
Query: 108 VAVVDKVVPCSGATGAGQGYIWMVHRTPG-SEIWDLALRSNKLWKMLADSLRD-QGLDPL 165
V V+++ +P + A+ A G + + G ++L LRS L+ A LR+ G+D
Sbjct: 29 VTVLERSIPGAEASSAAGGILAPQWESEGPGPFFELCLRSRALYGSFAAELRELSGVD-- 86
Query: 166 QVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL---MVGED 222
I ++ G L + +L ++ V GLRAE L S + E L VG
Sbjct: 87 --IAYRPCGLLRVAFDESDLHHVESTVGWQHGMGLRAELLDSKAARELESHLSPAAVG-- 142
Query: 223 SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS 282
AA P D Q+D L V + + F V ++ + G V
Sbjct: 143 --AAHFPDDHQVDNRLLVRALTMAAARVGTV-----FKSGYVRGVVHEH--GRAVGVDLD 193
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
L + A+V+AAG WS L + V V+P +G ++ L+ L +
Sbjct: 194 GEVLRAD-AVVLAAGSWSS------LVQGAGVSAQAVRPARGQMVQLQTRLPLLERVVTS 246
Query: 343 EAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRI 402
GY+ G ++ GS+ + GF+ +V + RI
Sbjct: 247 AKGYL------------------------VPRADGRIIAGSTMEHVGFDKQVTAAGLARI 282
Query: 403 WKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG--PVPGLSKVFLATGHEGL 460
A + P L + + + G RP+ D P IG P PGL FLATGH
Sbjct: 283 LDMALQLCPDLASAPITETWA------GFRPWTQDALPYIGEGPTPGL---FLATGHFRN 333
Query: 461 GLSLALGTAELVADMVLTNPLKVDSAPF 488
G+ LA TA+LVA VL VD PF
Sbjct: 334 GILLAPITAKLVAQAVLGEKPSVDLTPF 361
>gi|83814402|ref|YP_445358.1| glycine oxidase ThiO [Salinibacter ruber DSM 13855]
gi|83755796|gb|ABC43909.1| glycine oxidase ThiO [Salinibacter ruber DSM 13855]
Length = 423
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 166/408 (40%), Gaps = 63/408 (15%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEI- 139
T DV+I+G G +GL+I + LV V + +K G + G + P +EI
Sbjct: 46 TRDVLIVGGGTVGLSIGFE-LVRRGTPVTLFEKETAGRGTSYQAAGML-----APDAEIE 99
Query: 140 ------WDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
+D S + W AD + Q + ++ G+L++ + L+ +
Sbjct: 100 FEERELYDFNRESLRRWPDFADRVEAAS---GQSVDYRDEGTLIVADDRDAAEALERLYE 156
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+ GL E+L+ ++ EP + + A + P D Q+D V + + A
Sbjct: 157 FQRDQGLDVEWLTGAEARDVEP-FVAPSLAAAVYAPSDHQVDNRRLVGALRTAFK--AEG 213
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
G E PV ++ +V AV+T+ +VVAAG WS L D L
Sbjct: 214 GTLHE--ETPVEAVVPDE---DVPAVRTAGGERIEGNRVVVAAGVWSREL--DGLTPDAT 266
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
PV+P KG L L + L H V G ++ +
Sbjct: 267 P---PVRPVKGQSLQLRSKRPFDLQH-------------------VIRGPEAYLAPKSD- 303
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
G +V+G++ + GF+T V + + + E P +RDL + + + GLRP
Sbjct: 304 ---GRIVMGATSEEMGFDTTVTAGGLYDLLEGGWEVVPGIRDLPVDETWA------GLRP 354
Query: 434 YMPDGKPVIG--PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN 479
D P++G PG V +ATGH G+ L TAE +A ++ T
Sbjct: 355 ASRDHAPLLGRSAAPG---VLMATGHYRHGILLTPITAEEMARLIRTG 399
>gi|398840836|ref|ZP_10598067.1| glycine oxidase ThiO [Pseudomonas sp. GM102]
gi|398109667|gb|EJL99587.1| glycine oxidase ThiO [Pseudomonas sp. GM102]
Length = 366
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V VQTS + + +V+ AG WSG L+ L L++PV+P KG +++
Sbjct: 185 VVGVQTSMGAIAGDQ-VVLTAGAWSGDLLKSL------GLELPVEPVKGQMIL------- 230
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + GF+
Sbjct: 231 ----------YKCAADFL-------PSMVLAKGRYAIPRRDGHILIGSTLEHEGFDKTPT 273
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
T ++ + A E P L + A+ + + GLRP P+G P IG VPG ++L
Sbjct: 274 DTALESLKASAVELIPALAE---AEVVGHWA---GLRPGSPEGIPYIGRVPGFDGLWLNC 327
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D AP+A GR
Sbjct: 328 GHYRNGLVLAPASCQLFADVMLGRTPIIDPAPYAPAGR 365
>gi|398992535|ref|ZP_10695500.1| glycine oxidase ThiO [Pseudomonas sp. GM21]
gi|398136836|gb|EJM25914.1| glycine oxidase ThiO [Pseudomonas sp. GM21]
Length = 366
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 37/219 (16%)
Query: 275 EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNS 334
++ VQTS + + +V+ AG WSG L+ L L++PV+P KG +++ + +
Sbjct: 184 QIVGVQTSTGAIAGDQ-VVLTAGAWSGDLLKSL------GLELPVEPVKGQMILYKCASD 236
Query: 335 LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEV 394
+ +L+ A G++++GS+ + G++
Sbjct: 237 FLPS------------------------MVLAKGRYAIPRRDGHILIGSTLEHEGYDKTP 272
Query: 395 EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLA 454
+ ++ + A E P L D A+ + + GLRP P G P IG VPG ++L
Sbjct: 273 TDSALESLKATAVELIPALAD---AEVVGHWA---GLRPGSPQGIPYIGQVPGFEGLWLN 326
Query: 455 TGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D AP+A GR
Sbjct: 327 CGHYRNGLVLAPASCQLFADVMLGREPIIDPAPYAPTGR 365
>gi|443641443|ref|ZP_21125293.1| Putative glycine oxidase ThiO [Pseudomonas syringae pv. syringae
B64]
gi|443281460|gb|ELS40465.1| Putative glycine oxidase ThiO [Pseudomonas syringae pv. syringae
B64]
Length = 367
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
+ VQT + + +++AAG WSG L+ L L++PV+P KG +++ + +
Sbjct: 184 ISGVQTPAGDITGDR-VILAAGAWSGELLKTL------GLELPVEPVKGQMILYKCASDF 236
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+SM +L+ A G++++GS+ + GF+
Sbjct: 237 L---SSM---------------------VLAKGRYALPRRDGHILIGSTLEHEGFDKTTT 272
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
Q ++ + A E P L A+ ++ GLRP P+G P IGP+ G ++L
Sbjct: 273 QVALESLKASAVELLPPLAH---AEPVAQWA---GLRPGSPEGIPFIGPLGGFDGLWLNC 326
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L+ D++L +D AP+A GR
Sbjct: 327 GHYRNGLVLAPASCQLITDLLLEREPIIDPAPYAPTGR 364
>gi|423398394|ref|ZP_17375595.1| glycine oxidase ThiO [Bacillus cereus BAG2X1-1]
gi|401647610|gb|EJS65216.1| glycine oxidase ThiO [Bacillus cereus BAG2X1-1]
Length = 369
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 173/407 (42%), Gaps = 65/407 (15%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE 138
C +DV IIG G+IG ++A L VA+++K S A+ A G + + +
Sbjct: 2 CEKYDVAIIGGGVIGSSVA-HFLAERGHKVAIIEKQQIASEASKAAAGLLGVQAEWDAYD 60
Query: 139 -IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+++LA S ++ LA LR++ G+D IG+++ G I + +E KER+ +
Sbjct: 61 PLFELARESRAIFPQLATVLREKTGID----IGYEEKGIYRIAQNEDE----KERILHIM 112
Query: 197 E----AGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRH 249
+ G + +L+ L + EP E ++G A + P D + A + K H
Sbjct: 113 DWQQKTGEDSYFLTGDHLREKEPFLSESIIG----AVYYPKDGHVIA----PELTKAFAH 164
Query: 250 FASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLR 309
A+ A+ Y +R + +V + TS+ + +K +V+A G WS L+H
Sbjct: 165 SAAISG-ADIYEQTEVFDIRIENN-KVTGIVTSEGVITCEK-VVIAGGSWSTKLLHYFQS 221
Query: 310 ETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM 369
D P KG ++ + + L E Y+
Sbjct: 222 ------DWGTYPVKGEVVAVRSRKPLLKAPIFQERFYI---------------------- 253
Query: 370 TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI 429
T G V+G++ + FN V+ I I +RA P L++ A++ S
Sbjct: 254 --TPKRGGRYVIGATMKPHTFNKTVQPESITSILERAYTILPALKE---AEWESTWA--- 305
Query: 430 GLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
GLRP P +G G+ ++ TGH G+ L+ + + +AD++
Sbjct: 306 GLRPQSNHEAPYMGEHEGIKGLYACTGHYRNGILLSPVSGQYMADLI 352
>gi|258627203|ref|ZP_05721991.1| D-amino acid dehydrogenase small subunit [Vibrio mimicus VM603]
gi|258580505|gb|EEW05466.1| D-amino acid dehydrogenase small subunit [Vibrio mimicus VM603]
Length = 455
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 132/310 (42%), Gaps = 47/310 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L +D +L
Sbjct: 168 RQRGTLQVFRDEKQLAAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQDKLVGGLWL 227
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + ++ +G +F C ++ ++ VQT L
Sbjct: 228 PDDETGDCYL---FCQQLTELAQQQGVRFQF-----NCHIQQLVYEGKKIIGVQTDSG-L 278
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S + L +DIPV P KG+ L L + N+A
Sbjct: 279 IKADAYVVALGSYSTQFLKPL------GIDIPVYPVKGYSLTLPIIDE---NYA------ 323
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
P + +++T D I + + + AGF+ + Q I
Sbjct: 324 ---------PQSTVMDETYKVALTRFADRIR---VAGTAELAGFDPAIPQARKATIEMVV 371
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 372 RDLFPHGGDFTQGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 424
Query: 467 GTAELVADMV 476
G+A ++AD++
Sbjct: 425 GSASILADVI 434
>gi|283779039|ref|YP_003369794.1| FAD dependent oxidoreductase [Pirellula staleyi DSM 6068]
gi|283437492|gb|ADB15934.1| FAD dependent oxidoreductase [Pirellula staleyi DSM 6068]
Length = 417
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V AVQTS + + + +VVA G W+ L ++ IP++P KG+ LV+ +
Sbjct: 235 VRAVQTSTGPIAADQ-VVVATGAWTPQL------RAQLQTSIPIEPGKGYSLVMPKPSIC 287
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
E V +I+ ATT IG S+ +FAG++T +
Sbjct: 288 PKISMIFEEHRV------------------AITPLATTYRIG-----STMEFAGYDTSIR 324
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+ + AA + LR+ I + G RP PD P+IG +P L+ V LA
Sbjct: 325 PERLKLLTDGAAIY---LREPVATPTIESW---FGWRPMTPDSLPLIGRLPRLTNVTLAA 378
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
GH LGLS+A GT +LV+ +V +D P+AV+
Sbjct: 379 GHGMLGLSMAPGTGKLVSQIVTGAAPHIDPLPYAVE 414
>gi|262402840|ref|ZP_06079401.1| D-amino acid dehydrogenase small subunit [Vibrio sp. RC586]
gi|262351622|gb|EEZ00755.1| D-amino acid dehydrogenase small subunit [Vibrio sp. RC586]
Length = 420
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 132/310 (42%), Gaps = 47/310 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLAAIEKDMQLLAQSGVRFELLDVAQCLTHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + + + ++ C ++ ++ VQT L
Sbjct: 193 PDDETGDCYLFCQQLTELAQQHGVRFQF--------NCHIQQLVYEGKKIIGVQTDLGLL 244
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S +L+ L +DIPV P KG+ L L
Sbjct: 245 -KADAYVVALGSYSTALLKPL------GIDIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 284 ----DEAFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEPRKATIEMVA 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P+ D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPRGGDFAQGQFWT------GFRPMAPDGTPIIGATP-YANLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMV 476
G+A ++AD++
Sbjct: 390 GSASILADVI 399
>gi|410454720|ref|ZP_11308644.1| putative oxidoreductase [Bacillus bataviensis LMG 21833]
gi|409930650|gb|EKN67646.1| putative oxidoreductase [Bacillus bataviensis LMG 21833]
Length = 374
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 179/423 (42%), Gaps = 72/423 (17%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI--WMVHRTPGSEIWD 141
+I+IGAGI+G + A L +V +VD+ AT A G + W+ R ++ W
Sbjct: 4 IIVIGAGILGASTAYHL-AKQGANVILVDRE-DVGQATDAAAGIVCPWLSQRR--NKAWY 59
Query: 142 LALRSNKLW--KMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
+S + +++A D +D G+K+ G++ + + P +L + ER +Q E
Sbjct: 60 QLAKSGASYYPELIAQLEADGEID----TGYKRVGAICLHKDPNKLEQMAERARQRRE-- 113
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA-- 257
A + +L AE +++ F P + ++ YI G R R A
Sbjct: 114 -NAPEIGEITILSAE-------ETKRLFPPLSEEYGSV----YISGGARINGRALRNAMI 161
Query: 258 --EFYHDPVTCLLRSNS-----TGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRE 310
H L+ N+ V +Q ++N L++ + ++V AG W H+LL+
Sbjct: 162 RSSIKHG--VTFLKGNAFILSENNRVMGIQIAENNLFANQ-VIVTAGAW----FHELLQP 214
Query: 311 TEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMT 370
+ ++ +KP+K ++ H + + + PG NH +L+
Sbjct: 215 --LGVECLIKPQKAQIV-----------HLELPETETSSWPVVMPPG--NH-YLLTFGG- 257
Query: 371 ATTDVIGNLVLGSSRQF-AGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI 429
G +V+GS+ + AGF+T V ++ I + E P L + L + R+
Sbjct: 258 ------GRVVIGSTHENGAGFDTRVTAGGVNEILSKGLETAPGLAEGTLVE------TRV 305
Query: 430 GLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
G RP PD PV G +P + LA G GL+ +A + L ++D + +
Sbjct: 306 GFRPVAPDFLPVAGALPQFEGILLANGLGASGLTSGPYLGAELAKLALGRTTELDWSSYD 365
Query: 490 VQG 492
V G
Sbjct: 366 VGG 368
>gi|170700965|ref|ZP_02891947.1| D-amino-acid dehydrogenase [Burkholderia ambifaria IOP40-10]
gi|170134105|gb|EDT02451.1| D-amino-acid dehydrogenase [Burkholderia ambifaria IOP40-10]
Length = 428
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 174 GSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FLPYD 231
G+L + RT ++L + + L EA + E LS ++L AEP L LP D
Sbjct: 136 GTLQLFRTQQQLDGAAKDIAVLQEANVPFELLSPAELKNAEPALAAVSHKLTGGLRLPGD 195
Query: 232 SQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKA 291
D L + K RY + P+ L + + G + VQ T+ + A
Sbjct: 196 ETGDCQLFTTRLAALAESLGVKFRY----NSPIDSL--AIAGGRIAGVQCGSETVRAD-A 248
Query: 292 IVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHD 351
VVA G +S S + +L++ IPV P KG+ S+ A V D
Sbjct: 249 YVVALGSYSTSFISNLMK-------IPVYPLKGY---------------SITAPIV---D 283
Query: 352 LTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYP 411
T P + I++T I +G + GF+ + + + + +P
Sbjct: 284 ETAAPVSTVLDETYKIAITRFDQRI---RVGGMAEIVGFDKNLRAARRETLEMCVNDLFP 340
Query: 412 KLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAEL 471
D A F + GLRP PDG P++G P +S +FL TGH LG +++ G+ +L
Sbjct: 341 GGGDTSKATFWT------GLRPMTPDGTPIVGRTP-VSNLFLNTGHGTLGWTMSCGSGQL 393
Query: 472 VADMV 476
+AD++
Sbjct: 394 LADLI 398
>gi|398883920|ref|ZP_10638867.1| glycine oxidase ThiO [Pseudomonas sp. GM60]
gi|398195746|gb|EJM82775.1| glycine oxidase ThiO [Pseudomonas sp. GM60]
Length = 366
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 37/219 (16%)
Query: 275 EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNS 334
+V VQTS ++ + +V+ AG WSG L+ L L +PV+P KG +++ +
Sbjct: 184 KVVGVQTSAGAIHGDQ-VVLTAGAWSGDLLKSL------GLALPVEPVKGQMILYKCAAD 236
Query: 335 LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEV 394
+ +L+ A G++++GS+ + GF+
Sbjct: 237 FLPS------------------------MVLAKGRYAIPRRDGHILIGSTLEHEGFDKTP 272
Query: 395 EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLA 454
++ + A E P L D A+ + + GLRP P+G P IG VPG ++L
Sbjct: 273 TGYALESLKASAVELIPALAD---AEVVGHWA---GLRPGSPEGIPYIGRVPGFEGLWLN 326
Query: 455 TGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D AP+A GR
Sbjct: 327 CGHYRNGLVLAPASCQLFADVMLGRTPIIDPAPYAPAGR 365
>gi|294649652|ref|ZP_06727066.1| glycine oxidase ThiO family protein [Acinetobacter haemolyticus
ATCC 19194]
gi|292824468|gb|EFF83257.1| glycine oxidase ThiO family protein [Acinetobacter haemolyticus
ATCC 19194]
Length = 377
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 157/412 (38%), Gaps = 59/412 (14%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSE 138
+ IIGAGI GL A +L V SV + D+ A+ AG G Y W E
Sbjct: 3 IAIIGAGISGLMTALEL-VEQGCSVDIFDQQQAGQAASWAGGGILSPMYPWRY----APE 57
Query: 139 IWDLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCE 197
+ LA L++ + L G+D Q+ TG L+ + E+ Q E
Sbjct: 58 VNQLAQYGKSLYQSWNEKLYPITGID-FQI---HNTGMLIFDQ--EDFQTGLNYATQHNE 111
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
+ + L+ L P + D F + + L + I +H +
Sbjct: 112 PMQQCDLLNRIQLEAVNPHISKQFDQAIYFPQLANVRNPRLLQSLIHYLKQHPCVRF--- 168
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
F H + L+ N T V ++T + Y +V+ +G WS + R+ I
Sbjct: 169 -FEHCTIEKLIIKNKT--VHGIETEDHQQYFADQVVLTSGAWSNYWQQQVQRK------I 219
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
PV P +G +L+ + P ++ M G
Sbjct: 220 PVHPVQGQMLLFKT------------------------PENWLPTMCMNRVMYLIPRQDG 255
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
++V GSS GF+T V+ I E P+L + K GLRP P
Sbjct: 256 HIVCGSSMSECGFSTAVDAKTQQDILSACLEMVPELAQFPIV------KRWAGLRPSSPH 309
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
G P IG +P LS+++ GH GL + G+A+L+A ++L VD ++
Sbjct: 310 GIPYIGAMPELSRLWANFGHFRNGLCMGAGSAKLLAQLMLNQKTFVDPHAYS 361
>gi|414159765|ref|ZP_11416048.1| glycine oxidase ThiO [Staphylococcus simulans ACS-120-V-Sch1]
gi|410883632|gb|EKS31471.1| glycine oxidase ThiO [Staphylococcus simulans ACS-120-V-Sch1]
Length = 377
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 179/418 (42%), Gaps = 56/418 (13%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIW 140
+D+ IIGAG+IG++IAR L S LS+A++D+ + A+ G + + S ++
Sbjct: 2 YDLAIIGAGVIGMSIARHL-KDSGLSIALIDRDIEGKHASYKAGGMLGAQNEFKEDSPLF 60
Query: 141 DLALRSNKLWKMLA-DSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
LAL S + L+ D + G+D I ++Q G + + E++ LK++ L
Sbjct: 61 RLALTSRAKFNALSTDLFSETGID----IQYQQNGLIKLATQTEDVPSLKQQYAFLHSHD 116
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
+ LS +DL L+ ++ F+P+D Q++A Y + + + F
Sbjct: 117 EDVQDLSDTDLALLTNHLVKSTEA-MMFVPHDHQINAN---HYTKALHASLENAPNIDRF 172
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
H VT + R ++EA + + TL ++ A G W+G++ + + V
Sbjct: 173 SHTNVTAIHRVGEGYDIEAERNGRRTLTKAHKVIEATGAWAGNV------SEQPDIQEAV 226
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI--- 376
KG +L++EN DL L ++ MT ++
Sbjct: 227 SGVKGEVLLVEN------------------EDLDLKQ---------TLFMTNGCYIVPKP 259
Query: 377 -GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
++G++ F ++ V + + + A + P+L + S G+RP+
Sbjct: 260 PHRFLIGATSYFDDYSVGVSEQGKTWLLEEAIKRVPELAGSKELKYWS------GIRPWT 313
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
+ +P++ V +++ TGH G+ L+ EL+A+ V T PF + R
Sbjct: 314 KEEQPIMDEVQ--EGLWIITGHYRNGILLSPVIGELMAEWVATGHRPQTLEPFQFELR 369
>gi|15640805|ref|NP_230435.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae O1 biovar
El Tor str. N16961]
gi|121585684|ref|ZP_01675479.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae 2740-80]
gi|153817284|ref|ZP_01969951.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae NCTC
8457]
gi|153821361|ref|ZP_01974028.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae B33]
gi|227080965|ref|YP_002809516.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae M66-2]
gi|229505599|ref|ZP_04395109.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae BX
330286]
gi|229510729|ref|ZP_04400208.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae B33]
gi|229517850|ref|ZP_04407294.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae RC9]
gi|229608618|ref|YP_002879266.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae MJ-1236]
gi|298499082|ref|ZP_07008889.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae MAK 757]
gi|20138017|sp|Q9KTV1.1|DADA_VIBCH RecName: Full=D-amino acid dehydrogenase small subunit
gi|254766976|sp|C3LT39.1|DADA_VIBCM RecName: Full=D-amino acid dehydrogenase small subunit
gi|9655235|gb|AAF93951.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121550047|gb|EAX60063.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae 2740-80]
gi|126512200|gb|EAZ74794.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae NCTC
8457]
gi|126521071|gb|EAZ78294.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae B33]
gi|227008853|gb|ACP05065.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae M66-2]
gi|229344565|gb|EEO09539.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae RC9]
gi|229350694|gb|EEO15635.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae B33]
gi|229357822|gb|EEO22739.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae BX
330286]
gi|229371273|gb|ACQ61696.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae MJ-1236]
gi|297543415|gb|EFH79465.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae MAK 757]
Length = 421
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 134 RQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 193
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 194 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 244
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 245 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 284
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 285 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 337
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 338 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 390
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 391 GSASILAD-VLTH 402
>gi|398901534|ref|ZP_10650387.1| glycine oxidase ThiO [Pseudomonas sp. GM50]
gi|398179615|gb|EJM67219.1| glycine oxidase ThiO [Pseudomonas sp. GM50]
Length = 366
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V VQTS + + +V+ AG WSG L+ L L++PV+P KG +++
Sbjct: 185 VVGVQTSMGAIAGDQ-VVLTAGAWSGDLLKSL------GLELPVEPVKGQMIL------- 230
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + GF+
Sbjct: 231 ----------YKCAADFL-------PSMVLAKGRYAIPRRDGHILIGSTLEHEGFDKTPT 273
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
T ++ + A E P L + A+ + + GLRP P+G P IG VPG ++L
Sbjct: 274 DTALESLKASAVELIPALAE---AEVVGHWA---GLRPGSPEGIPYIGRVPGFDGLWLNC 327
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D AP+A GR
Sbjct: 328 GHYRNGLVLAPASCQLFADVMLGRAPIIDPAPYAPVGR 365
>gi|300311013|ref|YP_003775105.1| glycine/D-amino acid oxidase [Herbaspirillum seropedicae SmR1]
gi|300073798|gb|ADJ63197.1| glycine/D-amino acid oxidase (deaminating) protein [Herbaspirillum
seropedicae SmR1]
Length = 433
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 144/353 (40%), Gaps = 42/353 (11%)
Query: 127 YIWMVHRTPGSEIWDL-ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEEL 185
++W + R +E + + R +L + D LRD D +Q G+L + R+ E+L
Sbjct: 88 WMWQMLRNCNAERYAVNKERMVRLAEYSRDCLRDLRADVGIPYEGRQQGTLQLFRSQEQL 147
Query: 186 VMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FLPYDSQLDAMLAVAYI 243
+ + L EAG+ E L+ L AEP L D LP D D L +
Sbjct: 148 EGAAKDIAVLKEAGVPFELLTPDQLGNAEPALAKVRDKLTGGLRLPNDETGDCQLFTTRL 207
Query: 244 EKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSL 303
K RY V + + G++ V K L + VVA G +S
Sbjct: 208 ATMAEQIGVKFRYG------VDIDALAMAGGKIAGVVCGKE-LVQADSYVVALGSYS--- 257
Query: 304 MHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQ 363
LL E + IPV P KG+ + V D + P +
Sbjct: 258 -PQLLGEVPGLPAIPVYPLKGYSIT------------------VPITDASAAPVSTILDE 298
Query: 364 ILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFIS 423
I++T D I +G + G++T ++ + + +P D A F +
Sbjct: 299 TYKIAVTRFDDRI---RVGGMAEIVGYDTALKAKRRATLELVVNDLFPGAGDTAQASFWT 355
Query: 424 NRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
GLRP PDG PV+G P +S +++ TGH LG +++ G+ +L+AD++
Sbjct: 356 ------GLRPMTPDGTPVVGATP-VSNLYINTGHGTLGWTMSCGSGQLLADLI 401
>gi|261212114|ref|ZP_05926400.1| D-amino acid dehydrogenase small subunit [Vibrio sp. RC341]
gi|260838722|gb|EEX65373.1| D-amino acid dehydrogenase small subunit [Vibrio sp. RC341]
Length = 420
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 133/310 (42%), Gaps = 47/310 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLAAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 193 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 244 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T D I + + + AGF+ + + I A
Sbjct: 284 ----DEKFAPQSTVMDETYKVALTRFADRI---RVAGTAELAGFDPAIPEARKATIEMVA 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMV 476
G+A ++AD++
Sbjct: 390 GSASILADVI 399
>gi|416014072|ref|ZP_11561992.1| glycine oxidase ThiO [Pseudomonas syringae pv. glycinea str. B076]
gi|416024292|ref|ZP_11568424.1| glycine oxidase ThiO [Pseudomonas syringae pv. glycinea str. race
4]
gi|320326241|gb|EFW82295.1| glycine oxidase ThiO [Pseudomonas syringae pv. glycinea str. B076]
gi|320330665|gb|EFW86642.1| glycine oxidase ThiO [Pseudomonas syringae pv. glycinea str. race
4]
Length = 370
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 39/230 (16%)
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
V+ +R S V V T + + +++AAG WSG L+ L LD+PV+P K
Sbjct: 174 VSGFVREGS--RVSGVSTPSGDVTGDR-VILAAGAWSGELLKTL------SLDLPVEPVK 224
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
G +++ + + +SM +L+ A G++++GS
Sbjct: 225 GQMILYKCASDFL---SSM---------------------VLAKGRYAIPRRDGHILIGS 260
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
+ + GF+ ++ + A E P+L + A+ ++ GLRP P+G P IG
Sbjct: 261 TLEHEGFDKTTTHAALESLKASAIELLPELAN---AEPVAQWA---GLRPGSPEGIPFIG 314
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
P+ G ++L GH GL LA + +L+ D++L +D AP+ GR
Sbjct: 315 PLAGFDGLWLNCGHYRNGLVLAPASCQLITDLLLNREPIIDPAPYTPSGR 364
>gi|320104418|ref|YP_004180009.1| FAD dependent oxidoreductase [Isosphaera pallida ATCC 43644]
gi|319751700|gb|ADV63460.1| FAD dependent oxidoreductase [Isosphaera pallida ATCC 43644]
Length = 378
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 169/402 (42%), Gaps = 69/402 (17%)
Query: 91 IIGLTIARQLLV-GSDLSVAVVDKVVPCSGATGAGQGYIWMVH-------RTPGSEIWDL 142
+IGL++A L G V ++++ ++ AG G I V TP + L
Sbjct: 1 MIGLSVAYALARRGRGPRVLLLERGQTGQASSWAGAGMIAPVAPDALTSGATPREGLAML 60
Query: 143 ALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
S+ L++ A LRD+ G+DP +++ G + + +E L+ + G+
Sbjct: 61 RALSSCLYETWARDLRDETGIDPE----YRRQGGVDLAFNTKEADELQAMSGRWKREGIV 116
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAA--FLPYDSQL--DAMLAVAYIEKGNRHFASKGRYA 257
E L+ +D + EP L D A FLP +Q+ +L I R +
Sbjct: 117 FERLAQADYHRVEPRL---NDQVQAVYFLPDRAQIRNPRLLRALRIACQQRGVTIE---- 169
Query: 258 EFYHDPVTCLLRS--NSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
C + + G V V+ T + +V+AAG W+G L+ L R
Sbjct: 170 ------TGCEVANVVEQGGRVRGVRLEDGTERPGEIVVLAAGAWTGGLLERLGRA----- 218
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
IP +P KG L +L AG G V HG S + D
Sbjct: 219 -IPTRPVKGQLALL--------------AGPPGWLRRI-----VEHG---SYYLVPRAD- 254
Query: 376 IGNLVLGSS-RQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
G ++ G++ AGF++ + + + + A P LR + + GLRP
Sbjct: 255 -GRILAGATIEPDAGFDSSPTEEGVREVLEEAFLMCPGLRAFPV------ERTWAGLRPG 307
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
PD +P+IGP+PG+ + +A GH+ GL A GT E+VAD++
Sbjct: 308 SPDSRPLIGPLPGIQGLIVAAGHKRAGLQQAPGTGEVVADLI 349
>gi|426411555|ref|YP_007031654.1| glycine oxidase [Pseudomonas sp. UW4]
gi|426269772|gb|AFY21849.1| glycine oxidase [Pseudomonas sp. UW4]
Length = 366
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 37/219 (16%)
Query: 275 EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNS 334
+V VQT+ + + +V+ AG WSG L+ L L +PV+P KG +++ +
Sbjct: 184 KVVGVQTATGAVLGDQ-VVLTAGAWSGELLKRL------DLTLPVEPVKGQMILYKCAAD 236
Query: 335 LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEV 394
+ +L+ A G++++GS+ + GF+
Sbjct: 237 FLPS------------------------MVLAKGRYAIPRRDGHILIGSTLEHEGFDKTP 272
Query: 395 EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLA 454
++ + A E P L D A+ + + GLRP P+G P IGPVPG ++L
Sbjct: 273 TGAALESLKASAVELIPALAD---AEVVGHWA---GLRPGSPEGIPYIGPVPGFDGLWLN 326
Query: 455 TGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D P+A GR
Sbjct: 327 CGHYRNGLVLAPASCQLFADVMLGRTPIIDPTPYAPAGR 365
>gi|153800608|ref|ZP_01955194.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae MZO-3]
gi|124123897|gb|EAY42640.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae MZO-3]
Length = 421
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 134 RQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 193
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 194 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVYEGKKIIGVQTDLGLL 245
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 246 -KADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 284
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 285 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 337
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 338 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 390
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 391 GSASILAD-VLTH 402
>gi|254847922|ref|ZP_05237272.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae MO10]
gi|255744590|ref|ZP_05418541.1| D-amino acid dehydrogenase small subunit [Vibrio cholera CIRS 101]
gi|262161276|ref|ZP_06030387.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae INDRE
91/1]
gi|360034693|ref|YP_004936456.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae O1 str.
2010EL-1786]
gi|379740631|ref|YP_005332600.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae IEC224]
gi|417812827|ref|ZP_12459484.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-49A2]
gi|417815692|ref|ZP_12462324.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HCUF01]
gi|418331826|ref|ZP_12942766.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-06A1]
gi|418336590|ref|ZP_12945488.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-23A1]
gi|418343083|ref|ZP_12949877.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-28A1]
gi|418348253|ref|ZP_12952987.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-43A1]
gi|418354634|ref|ZP_12957355.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-61A1]
gi|419825244|ref|ZP_14348749.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae CP1033(6)]
gi|421316529|ref|ZP_15767100.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1032(5)]
gi|421320422|ref|ZP_15770979.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1038(11)]
gi|421324418|ref|ZP_15774944.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1041(14)]
gi|421328079|ref|ZP_15778593.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1042(15)]
gi|421331097|ref|ZP_15781577.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1046(19)]
gi|421334672|ref|ZP_15785139.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1048(21)]
gi|421338565|ref|ZP_15789000.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-20A2]
gi|421347046|ref|ZP_15797428.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-46A1]
gi|422890888|ref|ZP_16933295.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-40A1]
gi|422901763|ref|ZP_16937123.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-48A1]
gi|422905988|ref|ZP_16940830.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-70A1]
gi|422912582|ref|ZP_16947105.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HFU-02]
gi|422925064|ref|ZP_16958093.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-38A1]
gi|423144383|ref|ZP_17131996.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-19A1]
gi|423149036|ref|ZP_17136394.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-21A1]
gi|423152880|ref|ZP_17140077.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-22A1]
gi|423155689|ref|ZP_17142797.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-32A1]
gi|423159520|ref|ZP_17146491.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-33A2]
gi|423164209|ref|ZP_17150992.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-48B2]
gi|423730340|ref|ZP_17703657.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-17A1]
gi|423892057|ref|ZP_17725743.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-62A1]
gi|423926833|ref|ZP_17730360.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-77A1]
gi|424001387|ref|ZP_17744475.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-17A2]
gi|424005544|ref|ZP_17748527.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-37A1]
gi|424023554|ref|ZP_17763217.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-62B1]
gi|424026358|ref|ZP_17765973.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-69A1]
gi|424585683|ref|ZP_18025276.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1030(3)]
gi|424590022|ref|ZP_18029468.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1037(10)]
gi|424594381|ref|ZP_18033717.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1040(13)]
gi|424598244|ref|ZP_18037441.1| FAD dependent oxidoreductase family protein [Vibrio Cholerae
CP1044(17)]
gi|424600996|ref|ZP_18040152.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1047(20)]
gi|424605977|ref|ZP_18044941.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1050(23)]
gi|424612613|ref|ZP_18051419.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-41A1]
gi|424616434|ref|ZP_18055124.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-42A1]
gi|424644350|ref|ZP_18082103.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-56A2]
gi|424651992|ref|ZP_18089513.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-57A2]
gi|424655939|ref|ZP_18093240.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-81A2]
gi|440709071|ref|ZP_20889729.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae 4260B]
gi|443502886|ref|ZP_21069874.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-64A1]
gi|443506799|ref|ZP_21073588.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-65A1]
gi|443510906|ref|ZP_21077569.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-67A1]
gi|443514468|ref|ZP_21081006.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-68A1]
gi|443518280|ref|ZP_21084696.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-71A1]
gi|443523147|ref|ZP_21089386.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-72A2]
gi|443530779|ref|ZP_21096794.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-7A1]
gi|443534536|ref|ZP_21100447.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-80A1]
gi|443538128|ref|ZP_21103983.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-81A1]
gi|449056692|ref|ZP_21735360.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae O1 str.
Inaba G4222]
gi|254843627|gb|EET22041.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae MO10]
gi|255737621|gb|EET93015.1| D-amino acid dehydrogenase small subunit [Vibrio cholera CIRS 101]
gi|262029026|gb|EEY47679.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae INDRE
91/1]
gi|340041418|gb|EGR02384.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HCUF01]
gi|340042131|gb|EGR03096.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-49A2]
gi|341624748|gb|EGS50232.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-70A1]
gi|341625965|gb|EGS51386.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-48A1]
gi|341626454|gb|EGS51844.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-40A1]
gi|341640368|gb|EGS64958.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HFU-02]
gi|341648061|gb|EGS72128.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-38A1]
gi|356419988|gb|EHH73518.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-06A1]
gi|356420937|gb|EHH74445.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-21A1]
gi|356425785|gb|EHH79131.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-19A1]
gi|356432168|gb|EHH85365.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-23A1]
gi|356433771|gb|EHH86956.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-22A1]
gi|356437521|gb|EHH90610.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-28A1]
gi|356442590|gb|EHH95429.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-32A1]
gi|356446992|gb|EHH99782.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-43A1]
gi|356449819|gb|EHI02557.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-33A2]
gi|356453036|gb|EHI05699.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-61A1]
gi|356456094|gb|EHI08707.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-48B2]
gi|356645847|gb|AET25902.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae O1 str.
2010EL-1786]
gi|378794141|gb|AFC57612.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae IEC224]
gi|395920088|gb|EJH30910.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1041(14)]
gi|395921486|gb|EJH32306.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1032(5)]
gi|395923404|gb|EJH34215.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1038(11)]
gi|395929585|gb|EJH40334.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1042(15)]
gi|395932361|gb|EJH43104.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1046(19)]
gi|395936533|gb|EJH47256.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1048(21)]
gi|395943513|gb|EJH54187.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-20A2]
gi|395946106|gb|EJH56770.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-46A1]
gi|395961746|gb|EJH72058.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-56A2]
gi|395963298|gb|EJH73570.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-57A2]
gi|395965981|gb|EJH76117.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-42A1]
gi|395977231|gb|EJH86650.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1030(3)]
gi|395978663|gb|EJH88038.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1047(20)]
gi|408016050|gb|EKG53611.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-41A1]
gi|408035847|gb|EKG72302.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1037(10)]
gi|408036437|gb|EKG72868.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1040(13)]
gi|408044404|gb|EKG80325.1| FAD dependent oxidoreductase family protein [Vibrio Cholerae
CP1044(17)]
gi|408046065|gb|EKG81786.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
CP1050(23)]
gi|408056538|gb|EKG91416.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-81A2]
gi|408610781|gb|EKK84146.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae CP1033(6)]
gi|408626853|gb|EKK99687.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-17A1]
gi|408657834|gb|EKL28910.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-77A1]
gi|408658889|gb|EKL29947.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-62A1]
gi|408847979|gb|EKL88035.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-37A1]
gi|408848906|gb|EKL88942.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-17A2]
gi|408872884|gb|EKM12092.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-62B1]
gi|408880945|gb|EKM19860.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-69A1]
gi|439975371|gb|ELP51494.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae 4260B]
gi|443432783|gb|ELS75305.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-64A1]
gi|443436608|gb|ELS82726.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-65A1]
gi|443440170|gb|ELS89860.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-67A1]
gi|443444264|gb|ELS97539.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-68A1]
gi|443448101|gb|ELT04737.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-71A1]
gi|443450875|gb|ELT11140.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-72A2]
gi|443457862|gb|ELT25258.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-7A1]
gi|443462320|gb|ELT33360.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-80A1]
gi|443465717|gb|ELT40376.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-81A1]
gi|448263860|gb|EMB01100.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae O1 str.
Inaba G4222]
Length = 420
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 193 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 244 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 284 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 390 GSASILAD-VLTH 401
>gi|269965183|ref|ZP_06179317.1| D-amino acid dehydrogenase small subunit [Vibrio alginolyticus 40B]
gi|269830169|gb|EEZ84396.1| D-amino acid dehydrogenase small subunit [Vibrio alginolyticus 40B]
Length = 418
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 135/315 (42%), Gaps = 43/315 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++L +++ ++ L ++G R + + ++ EP L + +D L
Sbjct: 133 RQFGTLQVFRTHQQLQAIEKDMQLLEQSGTRFKLMDVEQCIEQEPGLALVKDKLVGGLHL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D + + + + + + VT ++ VQT++ +
Sbjct: 193 PDDETGDCHQFCQQLTELAKAHGVRFEFDTEVSNWVTV------GKKIIGVQTNRGQFKA 246
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
+ VVA+G +S +L+ L +DIPV P KG+ L + ME
Sbjct: 247 DQ-YVVASGSYSTALLKQL------DIDIPVYPVKGYSLTI-----------PME----- 283
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D P + ++MT D I + + + AGF+ + Q + I +
Sbjct: 284 --DEHFSPRSTVMDETYKVAMTRFDDRIR---VAGTAELAGFDASLPQKRKNTIEMVIRD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P+ D A+F S G RP PDG P+IG +F TGH LG ++A G+
Sbjct: 339 LFPRCGDFSQAEFWS------GFRPMTPDGTPIIGATK-YDNLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMVLTNPLKV 483
+L+A ++ KV
Sbjct: 392 GQLLASVMKGEKAKV 406
>gi|334340830|ref|YP_004545810.1| FAD dependent oxidoreductase [Desulfotomaculum ruminis DSM 2154]
gi|334092184|gb|AEG60524.1| FAD dependent oxidoreductase [Desulfotomaculum ruminis DSM 2154]
Length = 382
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 166/400 (41%), Gaps = 52/400 (13%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T D ++IG G+IG +IA L + +++K SGATG + M T + +
Sbjct: 4 TADYVVIGGGVIGCSIAYNLARKGARKIVLIEKKYLTSGATGRCGAGLRMQFGTETNCL- 62
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA +S ++++ L + L QG I KQ G LL+ T + + + + + G+
Sbjct: 63 -LAKKSIEIYEHLEEELDYQG-----SIELKQGGYLLLAYTEKMVEQFHKNLGVQHQLGI 116
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAV-AYIEKGNRHFASKGRYAEF 259
+ +++ + + P L A F D + AY + +R Y E
Sbjct: 117 PSRWVTPEESKEIVPHLNTQGLLGATFCQKDGHCNPFKTTDAYAKAASRLGVEIMTYTE- 175
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
VT LL + G++ V+T K + S +++ AG +S L I +D+P+
Sbjct: 176 ----VTRLLSRD--GKITGVETDKGVIESP-VVILCAGSYSKDLA------ATIGIDLPL 222
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
P + +LV E +++ M + +H L QV HG V+G
Sbjct: 223 TPERHQILVTE---PVEMMQEPMVMSF--YHGLYCQ--QVPHGSF----------VMG-- 263
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR--IGLRPYMPD 437
LG + +N + + + P L +L R VR GL PD
Sbjct: 264 -LGDPNEPKEYNQNSSWQFLHEMAAKVTFLLPPLANL--------RVVRQWAGLYDLTPD 314
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
+ ++G VPG+ LA G G G +A T L+A+ +L
Sbjct: 315 RQQILGSVPGIEGFHLAAGFSGHGFMIAPMTGRLMAEYIL 354
>gi|347539262|ref|YP_004846687.1| D-amino-acid dehydrogenase [Pseudogulbenkiania sp. NH8B]
gi|345642440|dbj|BAK76273.1| D-amino-acid dehydrogenase [Pseudogulbenkiania sp. NH8B]
Length = 420
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 135/327 (41%), Gaps = 58/327 (17%)
Query: 170 WKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF-L 228
W++ G+L + R+ E + G+ L ++L +A P VG++ + A +
Sbjct: 139 WRRHGNLTLYRSEAEFAAAEAAWHAKRAHGVEWRKLGRAELERAAPP--VGKEWQVAVNV 196
Query: 229 PYDSQLDAM------LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS 282
P S +D L A+I +G R F D V L ++ G + V+T+
Sbjct: 197 PAWSHVDDPYTFSRGLFDAFIREGGR----------FVQDEV--LATVSAAGRIAGVETA 244
Query: 283 KNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASM 342
+V+A G WS + IP++ +G+ + L N
Sbjct: 245 NRGRLEADTVVIACGIWSDRFT------AQHQYRIPLESERGYHVTLPN----------- 287
Query: 343 EAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRI 402
AG HH + Q S S G L L + + A + + +
Sbjct: 288 -AGVALHHFI----------QCASESFVILPMGNGGLRLAGTVELAHRDAQPD------- 329
Query: 403 WKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLG 461
W+RA K + + + DF S+ V +G RP +PD PVIGP P + ++ ATGH LG
Sbjct: 330 WRRAHILIDKAKRI-VGDFDASDMSVWMGNRPSVPDTVPVIGPAPDSAGLYFATGHGHLG 388
Query: 462 LSLALGTAELVADMVLTNPLKVDSAPF 488
L+LA T L+ DM+ P D +P+
Sbjct: 389 LTLAATTGALLTDMIQRRPSSFDVSPY 415
>gi|71736917|ref|YP_273024.1| glycine oxidase ThiO [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71557470|gb|AAZ36681.1| glycine oxidase ThiO [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 370
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 175/422 (41%), Gaps = 77/422 (18%)
Query: 85 IIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQG-----YIWMVHRTPGSEI 139
+I+G G+IGL A L +SV ++D+ ++ AG G Y W +P +
Sbjct: 7 VIVGGGVIGLLTAFNL-ASEQVSVVLLDRSGVGQESSWAGGGIVSPLYPW--RYSPA--V 61
Query: 140 WDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA 198
LA S + LA+ L Q G+DP + +T + L + L A
Sbjct: 62 TALAHWSQDFYPHLAERLFAQTGIDPE------------VHKTGLYWLDLDDEQAALEWA 109
Query: 199 GLRAEYLSSSDLLQAEPELMV--GEDSRAAFLP-----YDSQLDAMLAVAYIEKGNRHFA 251
L+S D+ + V G SRA ++ + +L L A + N
Sbjct: 110 VREKRSLTSVDISAVNDAVPVLGGGYSRAIYMADVANVRNPRLVKSLKAALLAMPNVEIR 169
Query: 252 SKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET 311
+ + F +R S V V T + + +++AAG WSG L+ L
Sbjct: 170 EQCEVSGF--------VREGS--RVSGVSTPSGDVTGDR-VILAAGAWSGELLKTL---- 214
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTA 371
LD+PV+P KG +++ + + +SM +L+ A
Sbjct: 215 --GLDLPVEPVKGQMILYKCASDFL---SSM---------------------VLAKGRYA 248
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
G++++GS+ + GF+ ++ + A E P+L + A+ ++ GL
Sbjct: 249 IPRRDGHILIGSTLEHEGFDKTTTHAALESLKASAIELLPELAN---AEPVAQWA---GL 302
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
RP P+G P IGP+ G ++L GH GL LA + +L+ D++L +D AP+
Sbjct: 303 RPGSPEGIPFIGPLAGFDGLWLNCGHYRNGLVLAPASCQLITDLLLNREPIIDPAPYTPS 362
Query: 492 GR 493
GR
Sbjct: 363 GR 364
>gi|398876539|ref|ZP_10631694.1| glycine oxidase ThiO [Pseudomonas sp. GM67]
gi|398204305|gb|EJM91109.1| glycine oxidase ThiO [Pseudomonas sp. GM67]
Length = 366
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 99/219 (45%), Gaps = 37/219 (16%)
Query: 275 EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNS 334
+V VQTS + + +V+ AG WSG L+ L L +PV+P KG +++
Sbjct: 184 KVVGVQTSAGAILGDQ-VVLTAGAWSGDLLKSL------GLALPVEPVKGQMIL------ 230
Query: 335 LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEV 394
Y D +L+ A G++++GS+ + GF+
Sbjct: 231 -----------YKCAADFL-------PSMVLAKGRYAIPRRDGHILIGSTLEHEGFDKTP 272
Query: 395 EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLA 454
+ ++ + A E P L D A+ + + GLRP P+G P IG VPG ++L
Sbjct: 273 TGSALESLKASAVELIPALAD---AEVVGHWA---GLRPGSPEGIPYIGRVPGFEGLWLN 326
Query: 455 TGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D AP+A GR
Sbjct: 327 CGHYRNGLVLAPASCQLFADVMLGRTPIIDPAPYAPAGR 365
>gi|421353580|ref|ZP_15803912.1| FAD dependent oxidoreductase family protein [Vibrio cholerae HE-45]
gi|422306276|ref|ZP_16393458.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae CP1035(8)]
gi|395952705|gb|EJH63318.1| FAD dependent oxidoreductase family protein [Vibrio cholerae HE-45]
gi|408626875|gb|EKK99707.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae CP1035(8)]
Length = 420
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 193 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 244 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 284 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 390 GSASILAD-VLTH 401
>gi|254285501|ref|ZP_04960465.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae
AM-19226]
gi|150424363|gb|EDN16300.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae
AM-19226]
Length = 421
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 134 RQRGTLQVFRDEKQLAAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 193
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 194 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 244
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 245 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 284
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 285 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 337
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 338 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 390
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 391 GSASILAD-VLTH 402
>gi|153828310|ref|ZP_01980977.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae 623-39]
gi|148876264|gb|EDL74399.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae 623-39]
Length = 421
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 134 RQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 193
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 194 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 244
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 245 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 284
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 285 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 337
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 338 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 390
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 391 GSASILAD-VLTH 402
>gi|229513076|ref|ZP_04402542.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae TMA 21]
gi|254225047|ref|ZP_04918661.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae V51]
gi|125622434|gb|EAZ50754.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae V51]
gi|229349969|gb|EEO14923.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae TMA 21]
Length = 421
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 134 RQRGTLQVFRDEKQLAAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 193
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 194 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 244
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 245 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 284
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 285 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 337
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 338 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 390
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 391 GSASILAD-VLTH 402
>gi|419835694|ref|ZP_14359138.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-46B1]
gi|421342446|ref|ZP_15792852.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-43B1]
gi|423734057|ref|ZP_17707271.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-41B1]
gi|424008341|ref|ZP_17751290.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-44C1]
gi|395945197|gb|EJH55867.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
HC-43B1]
gi|408631503|gb|EKL04043.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-41B1]
gi|408858448|gb|EKL98122.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-46B1]
gi|408865781|gb|EKM05173.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HC-44C1]
Length = 420
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDQKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 193 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 244 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 284 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 390 GSASILAD-VLTH 401
>gi|424658645|ref|ZP_18095901.1| FAD dependent oxidoreductase family protein [Vibrio cholerae HE-16]
gi|408054467|gb|EKG89441.1| FAD dependent oxidoreductase family protein [Vibrio cholerae HE-16]
Length = 420
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLAAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 193 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 244 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 284 ----DEKFAPQSTVMDETYKVALTRFSDRIR---VAGTAELAGFDPAIPEARKATIEMVA 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 390 GSASILAD-VLTH 401
>gi|398980975|ref|ZP_10689207.1| glycine oxidase ThiO [Pseudomonas sp. GM25]
gi|398134006|gb|EJM23182.1| glycine oxidase ThiO [Pseudomonas sp. GM25]
Length = 366
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V VQTS + + +V+ AG WSG L+ L L +PV+P KG +++
Sbjct: 185 VVGVQTSTGVITGDQ-VVLTAGAWSGELLKTL------NLSLPVEPVKGQMIL------- 230
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
Y D +L+ A G++++GS+ + GF+
Sbjct: 231 ----------YKCAADFL-------PSMVLAKGRYAIPRRDGHILIGSTLEHEGFDKTPT 273
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
++ + A E P L D A+ + + GLRP P+G P IG VPG ++L
Sbjct: 274 DNALESLKASAVELLPALAD---AEVVGHWA---GLRPGSPEGIPYIGRVPGFDGLWLNC 327
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D AP+A GR
Sbjct: 328 GHYRNGLVLAPASCQLFADVMLGRTPIIDPAPYAPAGR 365
>gi|87118491|ref|ZP_01074390.1| hydrogen cyanide synthase HcnC [Marinomonas sp. MED121]
gi|86166125|gb|EAQ67391.1| hydrogen cyanide synthase HcnC [Marinomonas sp. MED121]
Length = 426
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 176/442 (39%), Gaps = 85/442 (19%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG----- 136
+D++I G G+IG + A L DL +A+VD P A+ A G +W + + G
Sbjct: 9 YDIVIAGGGVIGASCAYFLSKQKDLKIALVDLKKP-GNASRASAGGLWAIGESVGLGCGV 67
Query: 137 ---------------------------SEIWDLALRSNKLWKMLADSLRD-QGLDPLQVI 168
++ AL+SN ++ L L+D G+D
Sbjct: 68 IFFNRMTMQQADATGEDLPPMRPHVLPDYFFEFALKSNAMYPGLWQELKDNHGVD----F 123
Query: 169 GWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF- 227
+++TG + + + V + + +LS+ +L + EP + + S A
Sbjct: 124 KFEKTGLKYVMYDEYDKMYADSIVDHIPGLIDQVSWLSAEELAEDEP--YINKKSIGALE 181
Query: 228 LPYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTL 286
D Q++ L AY+E ++ F V + + + +V V+T +
Sbjct: 182 FKCDHQVNPYRLNEAYLEGARQNGVDL-----FLETEVLSIEKQGN--KVIGVETDAGFI 234
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
+ ++ AAG W+ L + +++PV P KG +++ E + S Y
Sbjct: 235 -GCETLINAAGSWAAQL-----SKMATGIELPVYPVKGQIILSERLPKILKGCVSTTDCY 288
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
+ D +G++L +GS+ + GF+T + + A
Sbjct: 289 IAQKD---------NGEVL---------------IGSTTEEKGFDTTNTLPELKELVNGA 324
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ P L DL + ++ GLRP PD P++G +PG+ A GH G+ +
Sbjct: 325 VKCIPMLNDLNI------KRCWAGLRPGTPDEFPILGEMPGVEGYINACGHFRTGILTSA 378
Query: 467 GTAELVADMVLTNPLKVDSAPF 488
T +L+ D+ PL +D PF
Sbjct: 379 ITGKLINDLYRGLPLDMDITPF 400
>gi|229525430|ref|ZP_04414835.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae bv.
albensis VL426]
gi|429884965|ref|ZP_19366570.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae PS15]
gi|229339011|gb|EEO04028.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae bv.
albensis VL426]
gi|429228297|gb|EKY34225.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae PS15]
Length = 420
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 193 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 244 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 284 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 390 GSASILAD-VLTH 401
>gi|384424016|ref|YP_005633374.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae
LMA3984-4]
gi|327483569|gb|AEA77976.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae
LMA3984-4]
Length = 420
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 193 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 244 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 284 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 390 GSASILAD-VLTH 401
>gi|421350607|ref|ZP_15800972.1| FAD dependent oxidoreductase family protein [Vibrio cholerae HE-25]
gi|422922006|ref|ZP_16955207.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
BJG-01]
gi|341647269|gb|EGS71354.1| FAD dependent oxidoreductase family protein [Vibrio cholerae
BJG-01]
gi|395951052|gb|EJH61666.1| FAD dependent oxidoreductase family protein [Vibrio cholerae HE-25]
Length = 420
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLAAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 193 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 244 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 284 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 390 GSASILAD-VLTH 401
>gi|417823915|ref|ZP_12470506.1| FAD dependent oxidoreductase family protein [Vibrio cholerae HE48]
gi|340047600|gb|EGR08523.1| FAD dependent oxidoreductase family protein [Vibrio cholerae HE48]
Length = 420
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLAAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 193 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 244 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 284 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 390 GSASILAD-VLTH 401
>gi|294507239|ref|YP_003571297.1| D-aminoacid oxidase [Salinibacter ruber M8]
gi|294343566|emb|CBH24344.1| D-aminoacid oxidase [Salinibacter ruber M8]
Length = 413
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 166/408 (40%), Gaps = 63/408 (15%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEI- 139
T DV+I+G G +GL+I + LV V + +K G + G + P +EI
Sbjct: 36 TRDVLIVGGGTVGLSIGFE-LVRRGTPVTLFEKETAGRGTSYQAAGML-----APDAEIE 89
Query: 140 ------WDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
+D S + W AD + Q + ++ G+L++ + L+ +
Sbjct: 90 FEERELYDFNRESLRRWPDFADRVEAAS---GQSVDYRDEGTLIVADDRDAAEALERLYE 146
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+ GL E+L+ ++ EP + + A + P D Q+D V + + A
Sbjct: 147 FQRDQGLDVEWLTGAEARDVEP-FVAPSLAAAVYAPSDHQVDNRRLVGALRTAFK--AEG 203
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
G E PV ++ +V AV+T+ +VVAAG WS L D L
Sbjct: 204 GTLHE--ETPVEAVVPDE---DVPAVRTAGGERIEGNRVVVAAGVWSREL--DGLTPDAT 256
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
PV+P KG L L + L H V G ++ +
Sbjct: 257 P---PVRPVKGQSLQLRSKRPFDLQH-------------------VIRGPEAYLAPKSD- 293
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
G +V+G++ + GF+T V + + + E P +RDL + + + GLRP
Sbjct: 294 ---GRIVMGATSEEMGFDTTVTAGGLYDLLEGGWEVVPGIRDLPVDETWA------GLRP 344
Query: 434 YMPDGKPVIG--PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN 479
D P++G PG V +ATGH G+ L TAE +A ++ T
Sbjct: 345 ASRDHAPLLGRSAAPG---VLMATGHYRHGILLTPITAEEMARLIRTG 389
>gi|420254198|ref|ZP_14757213.1| glycine/D-amino acid oxidase, deaminating [Burkholderia sp. BT03]
gi|398049727|gb|EJL42130.1| glycine/D-amino acid oxidase, deaminating [Burkholderia sp. BT03]
Length = 416
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 133/323 (41%), Gaps = 44/323 (13%)
Query: 170 WKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--F 227
+ + G L++ R P E + +++ L AG L S + EP L + A +
Sbjct: 132 YVRNGKLVVYRDPHEFERARRKMELLVAAGSNQRALDGSACVALEPALAHAQPLIAGGIY 191
Query: 228 LPYDSQLDA-MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTL 286
P + D VA + R + R Y PV L+ + G + A +T+ +
Sbjct: 192 TPSEEAGDCHRFGVALADALQR----RHRVTIRYETPVRELV--SEGGRIVAARTAAGDI 245
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G S L+ L + +PV P G+ L + N N L S+
Sbjct: 246 -EADAFVVALGLGSVPLLDAL------GVRLPVYPLTGYSLTIHNANPLHTPRVSVT--- 295
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
DL H +I+ + G L + + AG + +D + ++A
Sbjct: 296 ----DL--------HRKIVYAPLG------GRLRIAGMVEIAGLSDAQRAERVDLLKRQA 337
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
E +P D +N + G RP PD KP+IG P S ++L TGH LG +LA
Sbjct: 338 QEIFPAAGDY------ANAQTWCGHRPATPDSKPLIGRTP-YSNLWLNTGHGALGFTLAC 390
Query: 467 GTAELVADMVLTNPLKVDSAPFA 489
G+A ++AD++ VD +A
Sbjct: 391 GSARVIADVIAGRAPSVDIDAYA 413
>gi|423721038|ref|ZP_17695220.1| glycine oxidase thiO [Geobacillus thermoglucosidans TNO-09.020]
gi|383366391|gb|EID43682.1| glycine oxidase thiO [Geobacillus thermoglucosidans TNO-09.020]
Length = 377
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 174/423 (41%), Gaps = 71/423 (16%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDK-------VVPCSGATGAGQGYIWMVH 132
H +DV I+G GIIG +IA QL + V++K +G GA +
Sbjct: 4 HHYDVAIVGGGIIGASIAFQL-AKRHFRIGVLEKGRMAGQASSAAAGMLGAQSEF----- 57
Query: 133 RTPGSEIWDLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKER 191
S + LAL+S ++ LA+ L++ G+D IG Q G L + T EE L+
Sbjct: 58 -AEESPLIPLALKSRAMFPPLAEELKELTGID----IGLVQKGMLKVAVTEEEAAALRRH 112
Query: 192 VKQLCEAGLRAEYLSSSDLLQAEPELMVGED-SRAAFLPYDSQLDAM-LAVAYIEKGNRH 249
+ A +LS +L + EP V D + LP D Q+ A LA A +
Sbjct: 113 YEFWRHTDEPAHWLSGDELAEMEPH--VSRDLTGVMHLPSDGQVSAPDLAFALANASVAY 170
Query: 250 FASKGRYAEF--YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDL 307
A Y EF +H + + GE+ A WS +
Sbjct: 171 GAKWHEYTEFIDFHRENHSYVIHTNHGEIAADAVVVAAG-----------AWSS----QV 215
Query: 308 LRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSI 367
L +T I L P+ P KG L+++ L ++A + + P + N
Sbjct: 216 LEKTGISL--PMYPVKGECLLVKTEKPL------IQATVFAENGCYIVPKRGN------- 260
Query: 368 SMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKV 427
L++G++ F+ +V I + +RA P L++ A++ K
Sbjct: 261 ----------RLLIGATSMPRTFDRKVSVQGIMSLLERAQRLVPGLKN---AEW---EKA 304
Query: 428 RIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAP 487
G RP DG P IG P +V++ATGH G+ L+ T L+AD++ + D AP
Sbjct: 305 WSGTRPQTGDGLPYIGKHPRYERVWVATGHYRNGILLSPVTGVLLADLIEGKESENDLAP 364
Query: 488 FAV 490
F++
Sbjct: 365 FSL 367
>gi|417820229|ref|ZP_12466843.1| FAD dependent oxidoreductase family protein [Vibrio cholerae HE39]
gi|423950820|ref|ZP_17733708.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HE-40]
gi|423977965|ref|ZP_17737257.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HE-46]
gi|340037860|gb|EGQ98834.1| FAD dependent oxidoreductase family protein [Vibrio cholerae HE39]
gi|408660990|gb|EKL31990.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HE-40]
gi|408665783|gb|EKL36590.1| flavin containing amine oxidoreductase family protein [Vibrio
cholerae HE-46]
Length = 420
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLAAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 193 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 244 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 284 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 390 GSASILAD-VLTH 401
>gi|121725977|ref|ZP_01679276.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae V52]
gi|121631459|gb|EAX63829.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae V52]
Length = 421
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 134 RQRGTLQVFRDEKQLAAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 193
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 194 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 244
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 245 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 284
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 285 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 337
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 338 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 390
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 391 GSASILAD-VLTH 402
>gi|422406188|ref|ZP_16483221.1| glycine oxidase ThiO, partial [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330881348|gb|EGH15497.1| glycine oxidase ThiO [Pseudomonas syringae pv. glycinea str. race
4]
Length = 234
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 36/202 (17%)
Query: 292 IVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHD 351
+++AAG WSG L+ L LD+PV+P KG +++ + + +SM
Sbjct: 63 VILAAGAWSGELLKTL------SLDLPVEPVKGQMILYKCASDFL---SSM--------- 104
Query: 352 LTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYP 411
+L+ A G++++GS+ + GF+ ++ + A E P
Sbjct: 105 ------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKTTTHAALESLKASAIELLP 152
Query: 412 KLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAEL 471
+L + A+ ++ GLRP P+G P IGP+ G ++L GH GL LA + +L
Sbjct: 153 ELAN---AEPVAQWA---GLRPGSPEGIPFIGPLAGFDGLWLNCGHYRNGLVLAPASCQL 206
Query: 472 VADMVLTNPLKVDSAPFAVQGR 493
+ D++L +D AP+ GR
Sbjct: 207 ITDLLLNREPIIDPAPYTPSGR 228
>gi|218528650|ref|YP_002419466.1| glycine oxidase ThiO [Methylobacterium extorquens CM4]
gi|218520953|gb|ACK81538.1| glycine oxidase ThiO [Methylobacterium extorquens CM4]
Length = 411
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 180/404 (44%), Gaps = 50/404 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIW-MVHRTPGSE-IW 140
DV ++GAG+IGL+IA + L + SVAVV++ SGA+ A G + PGS+ +
Sbjct: 29 DVAVVGAGLIGLSIAWR-LAQAGRSVAVVERGSVGSGASLAATGMLAPAAEHEPGSDLLL 87
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LAL S + W D+L+ + I +++ G+L+I +E+ L+ R +G+
Sbjct: 88 PLALESLRRWSAFRDALQAAS---GREIDYREDGTLVIAIGRDEVERLRFRHDLQRRSGV 144
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
AE+LS ++ EP L+ + P D+Q+D L +E R S G
Sbjct: 145 AAEWLSGPEVRAREP-LLRPNVTAGILCPLDAQVDPRL---VMEALLRACESAG---VVI 197
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG--SLMHDLLRETEIVLDIP 318
+ V G V + + TL + +++AAG WSG SL+ + L + L +P
Sbjct: 198 SEGVAVEGLERRGGRVTGLHAAGRTLAADT-VILAAGAWSGGASLLPNDLDVPD--LTVP 254
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
V+P KG L L + G + T ++ M D G+
Sbjct: 255 VRPLKGQSLALRT---------TKRTGTLSRMVWT-----------DAVHMAPKGD--GH 292
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++G++ + GF + V + + + A P + ++ + S G RP D
Sbjct: 293 LIVGATVEDCGFTSGVTAGGMFALLEGARRVLPGIEEMEIDAVWS------GFRPTSDDD 346
Query: 439 KPVI-GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPL 481
P+I PGL LATGH G LA TA+ VA ++ L
Sbjct: 347 APIIEEAAPGL---VLATGHHRNGYLLAPATADAVATLLTEGAL 387
>gi|447915146|ref|YP_007395714.1| putative oxidoreductase [Pseudomonas poae RE*1-1-14]
gi|445199009|gb|AGE24218.1| putative oxidoreductase [Pseudomonas poae RE*1-1-14]
Length = 369
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 36/202 (17%)
Query: 292 IVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHD 351
+V+AAG WSG L+ ++ L +PV+P KG +++ + +SM
Sbjct: 200 VVLAAGAWSGELL------GKLGLALPVEPVKGQMIL---YRCAPDFLSSM--------- 241
Query: 352 LTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYP 411
+L+ A G++++GS+ + AGF+ Q ++ + A E P
Sbjct: 242 ------------VLAKGRYAIPRRDGHILIGSTLEHAGFDKTPTQYALESLKASAEELIP 289
Query: 412 KLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAEL 471
L D A+ + + GLRP P+G P IG VPG ++L GH GL LA + +L
Sbjct: 290 VLAD---AEVVGHWA---GLRPGSPEGIPYIGEVPGFKGLWLNCGHYRNGLVLAPASCQL 343
Query: 472 VADMVLTNPLKVDSAPFAVQGR 493
AD++L +D +P+A GR
Sbjct: 344 FADLLLERRPIIDPSPYAPAGR 365
>gi|422017979|ref|ZP_16364538.1| D-amino acid dehydrogenase small subunit [Providencia alcalifaciens
Dmel2]
gi|414105104|gb|EKT66667.1| D-amino acid dehydrogenase small subunit [Providencia alcalifaciens
Dmel2]
Length = 433
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 178/442 (40%), Gaps = 89/442 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDK---VVPCSGATGAGQ---GYI--WMVHRTP 135
V+++GAG+IG+T A L V V+D+ V + A AGQ GY W P
Sbjct: 3 VLVLGAGVIGVTTA-WYLAQEGHEVCVIDRQNDVAEETSAGNAGQISPGYATPWGAPGIP 61
Query: 136 GSEI-W------DLALRSNK-------LWKML------------------ADSLRD--QG 161
+ W LA+R + +W+ML A+ RD +
Sbjct: 62 LKAVKWMFEKHAPLAIRPDGSLFQLRWMWQMLKNCDMQHYTMNKSRMVRIAEYSRDCIRQ 121
Query: 162 LDPLQVIGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP--EL 217
L IG+ +Q G+L + RT ++ + L + G+ E L++ L+ AEP E
Sbjct: 122 LRADTGIGYEGRQGGTLQLFRTAKQFENAANDIAVLQQEGVPYELLTAEQLVTAEPALEF 181
Query: 218 MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
+ + + LP D D + K R+ +T R +
Sbjct: 182 VKHKLTGGLRLPNDETGDCQQFTKKLAKMAEQAGVTFRFGCHVEQILTDGKR------IS 235
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
++ + L + + VVA G +S ++ L++ IPV P KG+ L + + L+
Sbjct: 236 GIKVNGEILLADQ-YVVAMGSYSTQMLQQLVK-------IPVYPLKGYSLTMPIIDELRA 287
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
+++ + A T + +G + GFN +V Q
Sbjct: 288 PVSTV---------------------LDETYKIAVTRFDQRIRVGGMAEVVGFNLDVLQK 326
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+ + + Y D+ A F + GLRP PDG P++GP S ++L TGH
Sbjct: 327 RCETLKMVVQDLYQGGGDISQAQFWT------GLRPMTPDGTPIVGPTE-FSNLYLNTGH 379
Query: 458 EGLGLSLALGTAELVADMVLTN 479
LG ++A G+ +L+AD++ N
Sbjct: 380 GTLGWTMACGSGKLLADLISGN 401
>gi|220927256|ref|YP_002502558.1| glycine oxidase ThiO [Methylobacterium nodulans ORS 2060]
gi|219951863|gb|ACL62255.1| glycine oxidase ThiO [Methylobacterium nodulans ORS 2060]
Length = 402
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 170/397 (42%), Gaps = 59/397 (14%)
Query: 101 LVGSDLSVAVVDKVVPCSGAT--GAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLR 158
L + L+VAV++K GA+ G H G + LAL S +LW D L
Sbjct: 44 LAEAGLAVAVLEKGRAGDGASLAATGMLAAAAEHEPGGDALLPLALESQRLWHPFRDDLE 103
Query: 159 D-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL 217
GL I +++ G+L+I +E+ L+ R + AGL +LS + EP L
Sbjct: 104 AASGL----TIDYRREGTLVIALGRDEVERLRFRHELQRRAGLDVAWLSGPAVRDREPSL 159
Query: 218 MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
+ F D Q+D + + + R A+ GR E V L R+ G V
Sbjct: 160 RP-TVTAGLFCAEDHQVDPPRVMTALRRALR--AAGGRLVEDCA--VEALDRAG--GRVV 212
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSG--SLMHDLLRETEIVLDIPVKPRKGHLLVLENFN-S 334
V+T+ + + IV+A+G W+G SL+ +L +PV+P KG L L+ S
Sbjct: 213 GVRTAAGAVRAGT-IVLASGAWAGEGSLVPELA--------LPVRPLKGQSLALKTTQRS 263
Query: 335 LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEV 394
+L+H I M +D G L++G++ + GF+ +
Sbjct: 264 GRLDHVVWTE---------------------QIHMAPKSD--GQLIVGATVEEIGFDPTL 300
Query: 395 EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG-PVPGLSKVFL 453
+ + + A +P + ++ + S G RP D P++G +PGL+ L
Sbjct: 301 TAGGLFALLEGARRAFPGIEEMSIEGVWS------GFRPTSDDDAPILGEALPGLA---L 351
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
A GH G LA TA ++++V L +APF +
Sbjct: 352 AVGHHRNGYLLAPATAAAISELVRGGALPAVAAPFGL 388
>gi|423689865|ref|ZP_17664385.1| glycine oxidase ThiO [Pseudomonas fluorescens SS101]
gi|387997931|gb|EIK59260.1| glycine oxidase ThiO [Pseudomonas fluorescens SS101]
Length = 369
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V T+ + + +V+AAG WSG L+ L L +P++P KG +++ + +
Sbjct: 185 VMGVNTATGQVLGDQ-VVLAAGAWSGQLLGTL------GLALPIEPVKGQMILYKCASDF 237
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+SM +L+ A G++++GS+ + GF+
Sbjct: 238 L---SSM---------------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKTPT 273
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
T ++ + A E P L D A+ + + GLRP P+G P +G VPG ++L
Sbjct: 274 DTALESLKASAVELIPALAD---AEVVGHWA---GLRPGSPEGIPFVGEVPGFKGLWLNC 327
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L D++L +D AP+A GR
Sbjct: 328 GHYRNGLVLAPASCQLFTDLLLARAPIIDPAPYAPAGR 365
>gi|262172156|ref|ZP_06039834.1| D-amino acid dehydrogenase small subunit [Vibrio mimicus MB-451]
gi|261893232|gb|EEY39218.1| D-amino acid dehydrogenase small subunit [Vibrio mimicus MB-451]
Length = 420
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 132/310 (42%), Gaps = 47/310 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R +++ +++ ++ L ++G+R E L+ + L EP L +D +L
Sbjct: 133 RQRGTLQVFRDEKQMAAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQDKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + ++ +G +F C ++ ++ VQT L
Sbjct: 193 PDDETGDCYL---FCQQLTELAQQQGVRFQF-----NCHIQQLVYEGKKIIGVQTDLG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S + L +DIPV P KG+ L L + N+A
Sbjct: 244 IKADAYVVALGSYSTQFLKPL------GIDIPVYPVKGYSLTLPIIDE---NYA------ 288
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
P + +++T D I + + + AGF+ + Q I
Sbjct: 289 ---------PQSTVMDETYKVALTRFADRI---RVAGTAELAGFDPAIPQARKATIEMVV 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFTQGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMV 476
G+A ++AD++
Sbjct: 390 GSASILADVI 399
>gi|312112158|ref|YP_003990474.1| glycine oxidase ThiO [Geobacillus sp. Y4.1MC1]
gi|311217259|gb|ADP75863.1| glycine oxidase ThiO [Geobacillus sp. Y4.1MC1]
Length = 377
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 174/423 (41%), Gaps = 71/423 (16%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDK-------VVPCSGATGAGQGYIWMVH 132
H +DV I+G GIIG +IA QL + V++K +G GA +
Sbjct: 4 HHYDVAIVGGGIIGASIAFQL-AKRHFRIGVLEKGRMAGQASSAAAGMLGAQSEF----- 57
Query: 133 RTPGSEIWDLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKER 191
S + LAL+S ++ LA+ L++ G+D IG Q G L + T EE L+
Sbjct: 58 -AEESPLIPLALKSRAMFPPLAEELKELTGID----IGLVQKGMLKVAVTEEEAAALRRH 112
Query: 192 VKQLCEAGLRAEYLSSSDLLQAEPELMVGED-SRAAFLPYDSQLDAM-LAVAYIEKGNRH 249
+ A +LS +L + EP V D + LP D Q+ A LA A +
Sbjct: 113 YEFWRHTDEPAHWLSGDELAEMEPH--VSRDLTGVMHLPSDGQVSAPDLAFALANASVAY 170
Query: 250 FASKGRYAEF--YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDL 307
A Y EF +H + + GE+ A WS +
Sbjct: 171 GAKWHEYTEFIDFHRENHSYVIHTNHGEIAADAVVVAAG-----------AWSS----QV 215
Query: 308 LRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSI 367
L +T I L P+ P KG L+++ L ++A + + P + N
Sbjct: 216 LEKTGISL--PMYPVKGECLLVKTEKPL------IQATVFAENGCYIVPKRGN------- 260
Query: 368 SMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKV 427
L++G++ F+ +V I + +RA P L++ A++ K
Sbjct: 261 ----------RLLIGATSTPRTFDRKVSVQGIMSLLERAQRLVPGLKN---AEW---EKA 304
Query: 428 RIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAP 487
G RP DG P IG P +V++ATGH G+ L+ T L+AD++ + D AP
Sbjct: 305 WSGTRPQTGDGLPYIGKHPRYERVWVATGHYRNGILLSPVTGVLLADLIEGKESENDLAP 364
Query: 488 FAV 490
F++
Sbjct: 365 FSL 367
>gi|422607947|ref|ZP_16679939.1| glycine oxidase ThiO [Pseudomonas syringae pv. mori str. 301020]
gi|330891581|gb|EGH24242.1| glycine oxidase ThiO [Pseudomonas syringae pv. mori str. 301020]
Length = 370
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 36/202 (17%)
Query: 292 IVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHD 351
+++AAG WSG L+ L LD+PV+P KG +++ + + +SM
Sbjct: 199 VILAAGAWSGELLKTL------GLDLPVEPVKGQMILYKCASDFL---SSM--------- 240
Query: 352 LTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYP 411
+L+ A G++++GS+ + GF+ ++ + A E P
Sbjct: 241 ------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKTTTHAALESLKASAIELLP 288
Query: 412 KLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAEL 471
+L + A+ ++ GLRP P+G P IGP+ G ++L GH GL LA + +L
Sbjct: 289 ELAN---AEPVAQWA---GLRPGSPEGIPFIGPLAGFDGLWLNCGHYRNGLVLAPASCQL 342
Query: 472 VADMVLTNPLKVDSAPFAVQGR 493
+ D++L +D AP+ GR
Sbjct: 343 ITDLLLNREPIIDPAPYTPSGR 364
>gi|262168767|ref|ZP_06036462.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae RC27]
gi|262022885|gb|EEY41591.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae RC27]
Length = 420
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 193 PDDETGDYYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLGLL 244
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 245 -KADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 284 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 390 GSASILAD-VLTH 401
>gi|154685602|ref|YP_001420763.1| GoxB [Bacillus amyloliquefaciens FZB42]
gi|154351453|gb|ABS73532.1| GoxB [Bacillus amyloliquefaciens FZB42]
Length = 369
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 147/349 (42%), Gaps = 63/349 (18%)
Query: 139 IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCE 197
+D A+ S +L++ L + G+D I G L + T E++ L+ ++ L
Sbjct: 62 FFDFAMHSQRLYEPAGQELEEACGID----IRRHNGGMLKLAYTEEDIACLR-KMDDLPS 116
Query: 198 AGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKG 254
+LS+ D L+ EP + ++G A+F+ D ++ KG R +
Sbjct: 117 ----VTWLSAEDALEKEPYASKDILG----ASFIKDDVHVEPYYVCKAYAKGARRYG--- 165
Query: 255 RYAEFY-HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
A+ Y H VT + R N GE + TS +Y+ K + VA+G WSG +++
Sbjct: 166 --ADIYEHTQVTSVKRMN--GEY-CITTSGGDVYADK-VAVASGVWSGRFF------SQL 213
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
L P P KG L + N D T + H + +
Sbjct: 214 GLGQPFFPVKGECLSVWN-------------------DDTPLTKTLYHDHCYVVPRKS-- 252
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
G LV+G++ + ++ + I+ + +A P + + + F + GLRP
Sbjct: 253 ---GRLVIGATMKHGDWSDTPDIGGIEAVIGKAKTMLPAIEHMKIDRFWA------GLRP 303
Query: 434 YMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLK 482
DGKP IG P S + A GH G+ LA TAE+V DM+L +K
Sbjct: 304 GTRDGKPFIGRHPEDSGIIFAAGHFRNGILLAPATAEMVRDMILERQIK 352
>gi|404402803|ref|ZP_10994387.1| FAD dependent oxidoreductase [Pseudomonas fuscovaginae UPB0736]
Length = 367
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 101/230 (43%), Gaps = 39/230 (16%)
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
V +R S +V V+TS + + + +V+AAG WSG L+ L L++PV+P K
Sbjct: 175 VAGFVREGS--KVVGVRTSSGDIPADQ-VVLAAGAWSGELLQTL------GLELPVEPVK 225
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
G +++ Y D IL+ A G++++GS
Sbjct: 226 GQMIL-----------------YKCAADFL-------PSMILAKGRYAIPRRDGHILIGS 261
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
+ + GF+ +D + A E P L + GLRP P+G P IG
Sbjct: 262 TLEHEGFDKTPTVPALDSLKASAVELIPALAG------VEPVAHWAGLRPGSPEGIPFIG 315
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
VPG ++L GH GL LA + +L AD++L +D AP+A GR
Sbjct: 316 QVPGFDGLWLNCGHYRNGLVLAPASCQLFADLLLGREPIIDPAPYAPAGR 365
>gi|147674088|ref|YP_001216269.1| D-amino acid dehydrogenase small subunit [Vibrio cholerae O395]
gi|227117160|ref|YP_002819056.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae O395]
gi|172047435|sp|A5F3D0.1|DADA_VIBC3 RecName: Full=D-amino acid dehydrogenase small subunit
gi|146315971|gb|ABQ20510.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae O395]
gi|227012610|gb|ACP08820.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae O395]
Length = 421
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 134 RQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 193
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 194 PDDETGDYYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLGLL 245
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 246 -KADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 284
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 285 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 337
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 338 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 390
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 391 GSASILAD-VLTH 402
>gi|186475530|ref|YP_001857000.1| D-amino acid dehydrogenase small subunit [Burkholderia phymatum
STM815]
gi|226722372|sp|B2JF25.1|DADA_BURP8 RecName: Full=D-amino acid dehydrogenase small subunit
gi|184191989|gb|ACC69954.1| D-amino-acid dehydrogenase [Burkholderia phymatum STM815]
Length = 428
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 128/305 (41%), Gaps = 44/305 (14%)
Query: 174 GSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FLPYD 231
G+L + RT ++L + + L EA + E L +DL +AEP L LP D
Sbjct: 136 GTLQLFRTQQQLDGAAKDIAVLEEANVPYELLMPADLARAEPALAATSHKLTGGLRLPGD 195
Query: 232 SQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKA 291
D L + K RY + P+ L + G + V+ N +
Sbjct: 196 ETGDCQLFTTRLAALAEQLGVKFRY----NTPIDAL--AMEGGRIAGVKCG-NEMVRADN 248
Query: 292 IVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHD 351
VVA G +S + L++ IPV P KG+ S+ A V D
Sbjct: 249 FVVALGSYSTQFLSGLVK-------IPVYPLKGY---------------SITAPIV---D 283
Query: 352 LTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYP 411
P + I++T D I +G + GF+ +++Q + + + +P
Sbjct: 284 AKSAPVSTVLDETYKIAITRFDDRI---RVGGMAEIVGFDKKLKQARRETLEMCVNDLFP 340
Query: 412 KLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAEL 471
D A F + GLRP PDG P++G P +S +FL TGH LG +++ G+ +L
Sbjct: 341 GGGDTSKATFWT------GLRPMTPDGTPIVGRTP-VSNLFLNTGHGTLGWTMSCGSGQL 393
Query: 472 VADMV 476
+AD++
Sbjct: 394 LADLI 398
>gi|268316070|ref|YP_003289789.1| FAD dependent oxidoreductase [Rhodothermus marinus DSM 4252]
gi|262333604|gb|ACY47401.1| FAD dependent oxidoreductase [Rhodothermus marinus DSM 4252]
Length = 415
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 171/461 (37%), Gaps = 111/461 (24%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDK-------------------VVPCSGATGAG 124
V+IIG G IGL A L S+ V+D+ +VP + G
Sbjct: 4 VVIIGGGAIGLASAFFLQQRGTFSITVIDQGPIGDGCSYGNAGFISPSHLVPLAAPGVIG 63
Query: 125 QGYIWMVHRTPGSEI-----WDLAL-----------------RSNKLWKMLADSLRDQGL 162
+G W++ P S WD L RS + + L + R+
Sbjct: 64 KGLRWLLD--PESPFYIRPRWDPELFRWLWLFRRAANEAHVTRSAPVLQALLERSRELTA 121
Query: 163 DPLQVIG---WKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV 219
+ +G +++ G L+ ++ E + ++ G+ E++ + L + +
Sbjct: 122 RLQEGVGDFEFRRDGLLMPYQSEEGRHECAQLAREAERLGMAHEWIPAERLAE-----LA 176
Query: 220 GEDSRAA---FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE------FYHDPVTCLLRS 270
G A F P D+ L + +R A+ RY E PVT L
Sbjct: 177 GTKVHAEGGLFFPGDAHL----------RPDRFTAALHRYLERQGVRFLAETPVTEL--- 223
Query: 271 NSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLE 330
G + + + S +VVAAG WS L+ + +P++P KG+
Sbjct: 224 ERRGGRVRGVRTPDGVLSADQVVVAAGAWSARLVR------AVGYRLPLQPAKGY----- 272
Query: 331 NFNSLKLNHASMEAGYVGHHDLTLHP---GQVNHGQILSISMTATTDVIGNLVLGSSRQF 387
LT P G +L+ + A T L + +
Sbjct: 273 --------------------SLTFTPPPEGMPRRPLLLTETKVAVTPFREAFRLAGTLEL 312
Query: 388 AGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPG 447
+G + + I++ A + P LR + ++ GLRP PDG PV+ VPG
Sbjct: 313 SGLELSIRDRRVQAIYRAAGRYLPALR----LPRMEQAEIWAGLRPCTPDGLPVVDRVPG 368
Query: 448 LSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
++LATGH LG+SLA T ELVA ++ VD P
Sbjct: 369 TENLWLATGHAMLGISLAAVTGELVAALISGAEPPVDPTPL 409
>gi|395499141|ref|ZP_10430720.1| putative oxidoreductase [Pseudomonas sp. PAMC 25886]
Length = 369
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 37/220 (16%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
G++ V T+ + + +V+AAG WSG L+ L L +PV+P KG +++ + +
Sbjct: 183 GKIVGVNTALGPIRGDQ-VVLAAGAWSGELLGSL------GLALPVEPVKGQMILYKCAS 235
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
+SM +L+ A G++++GS+ + GF+
Sbjct: 236 DFL---SSM---------------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKT 271
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
+ ++ + A E P L D A + + GLRP P+G P IG VPG ++L
Sbjct: 272 PTDSALESLKASAVELIPALAD---AQVVGHWA---GLRPGSPEGIPYIGKVPGFEGLWL 325
Query: 454 ATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D P+A GR
Sbjct: 326 NCGHYRNGLVLAPASCQLFADLLLERQPIIDPTPYAPAGR 365
>gi|157960641|ref|YP_001500675.1| FAD dependent oxidoreductase [Shewanella pealeana ATCC 700345]
gi|157845641|gb|ABV86140.1| FAD dependent oxidoreductase [Shewanella pealeana ATCC 700345]
Length = 441
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 151/357 (42%), Gaps = 48/357 (13%)
Query: 139 IWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA 198
I D+ L+S +L+++L P + Q G L++ T + L V Q +
Sbjct: 122 ILDINLKSLELYQILHQV-------PELDFEFHQNGLLMLCNTEQGLNDEATTVCQANKL 174
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA----MLAVAYIEKGNRHFASKG 254
GL+A+ L+ L + EP + + + A+F P D+ + M Y+ F +
Sbjct: 175 GLKAKMLTPQTLRELEPNIKL-DVMGASFYPEDAHIAPYEFIMAMKNYLAAQGVEFRERT 233
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
F D VT + +T E + V+A G WS L L
Sbjct: 234 EITGFTTDTVTQKISGATTANAE---------INADEFVLANGAWSPKLAKQL------G 278
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
L++PV+ KG + +F+ + G P ++ ++ + +
Sbjct: 279 LNLPVQSGKG---ICVSFDKPPVKE--------GTKLKCRTPFILSEAKVAVSPLDKSIR 327
Query: 375 VIGNLVLG--SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G + LG SS++ G + Q I + K AA + P DL A + + + G R
Sbjct: 328 FGGTMELGVLSSQESLG----ISQNRIKGLTKSAARYLP---DLDTAQ-VKSEEFWSGFR 379
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
P PDG P+IG VP L+ + +ATGH +GLSL T +LV++++ +D PF+
Sbjct: 380 PCSPDGLPIIGRVPQLANLTIATGHAMMGLSLGPITGKLVSELISNEETCLDLTPFS 436
>gi|390568712|ref|ZP_10249007.1| D-amino acid dehydrogenase small subunit [Burkholderia terrae
BS001]
gi|420256211|ref|ZP_14759066.1| glycine/D-amino acid oxidase, deaminating [Burkholderia sp. BT03]
gi|389939316|gb|EIN01150.1| D-amino acid dehydrogenase small subunit [Burkholderia terrae
BS001]
gi|398043625|gb|EJL36514.1| glycine/D-amino acid oxidase, deaminating [Burkholderia sp. BT03]
Length = 428
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 128/305 (41%), Gaps = 44/305 (14%)
Query: 174 GSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FLPYD 231
G+L + RT ++L + + L EA + E L DL +AEP L LP D
Sbjct: 136 GTLQLFRTQQQLDGAAKDIAVLEEANVPYELLMPDDLARAEPALAATAHKLTGGLRLPGD 195
Query: 232 SQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKA 291
D L + K RY + P+ L + G + V+ + +
Sbjct: 196 ETGDCQLFTTRLAALAEQLGVKFRY----NTPIDAL--AMEGGRIAGVKCGSE-MVRADS 248
Query: 292 IVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHD 351
VVA G +S + D+++ IPV P KG+ S+ A V D
Sbjct: 249 FVVALGSYSTKFLSDIVK-------IPVYPLKGY---------------SITAPIV---D 283
Query: 352 LTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYP 411
P + I++T D I +G + GF+ +++Q + + + +P
Sbjct: 284 AKSAPVSTVLDETYKIAITRFDDRI---RVGGMAEIVGFDKKLKQARRETLEMCVNDLFP 340
Query: 412 KLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAEL 471
D A F + GLRP PDG P++G P +S +FL TGH LG +++ G+ +L
Sbjct: 341 GGGDTSKATFWT------GLRPMTPDGTPIVGRTP-VSNLFLNTGHGTLGWTMSCGSGQL 393
Query: 472 VADMV 476
+AD++
Sbjct: 394 LADLI 398
>gi|423485949|ref|ZP_17462631.1| glycine oxidase ThiO [Bacillus cereus BtB2-4]
gi|423491673|ref|ZP_17468317.1| glycine oxidase ThiO [Bacillus cereus CER057]
gi|423501535|ref|ZP_17478152.1| glycine oxidase ThiO [Bacillus cereus CER074]
gi|401153627|gb|EJQ61052.1| glycine oxidase ThiO [Bacillus cereus CER074]
gi|401158606|gb|EJQ65996.1| glycine oxidase ThiO [Bacillus cereus CER057]
gi|402440510|gb|EJV72502.1| glycine oxidase ThiO [Bacillus cereus BtB2-4]
Length = 369
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 170/403 (42%), Gaps = 57/403 (14%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE 138
C +DV IIG G+IG ++A L VA+V+K S A+ A G + + +
Sbjct: 2 CKKYDVAIIGGGVIGSSVA-HFLAERGHKVAIVEKQRIASEASKAAAGLLGVQAEWDAYD 60
Query: 139 -IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+++LA S ++ LA LR++ G+D IG+++ G I + +E + +
Sbjct: 61 PLFELARESRAIFPQLAAVLREKTGID----IGYEEKGIYRIAQNEDEKKRILHIMDWQQ 116
Query: 197 EAGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+ G + +L+ L + EP E ++G A + P D Q+ A + K H A+
Sbjct: 117 KTGEDSRFLTGDHLREKEPFLSESIIG----AVYYPKDGQVIA----PELTKAFAHSAAI 168
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
A+ Y LR + +V + TS+ + +K +V+A G WS L+H
Sbjct: 169 SG-ADIYEQTEVFDLRIENN-KVTGIVTSEGVITCEK-VVIAGGSWSTKLLHYFQS---- 221
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
D P KG ++ + + L E Y+ T
Sbjct: 222 --DWGTYPVKGEVVAVRSRKPLLKAPIFQERFYI------------------------TP 255
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
G V+G++ + FN V+ I I +RA P L++ A++ S GLRP
Sbjct: 256 KRGGRYVIGATMKPHTFNKSVQPESITSILERAYTILPALKE---AEWESTWA---GLRP 309
Query: 434 YMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
P +G + ++ TGH G+ L+ + + +AD++
Sbjct: 310 QSNHEAPYMGEHEEIKGLYACTGHYRNGILLSPVSGQYMADLI 352
>gi|377821411|ref|YP_004977782.1| D-amino acid dehydrogenase small subunit [Burkholderia sp. YI23]
gi|357936246|gb|AET89805.1| D-amino acid dehydrogenase small subunit [Burkholderia sp. YI23]
Length = 430
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 181/441 (41%), Gaps = 93/441 (21%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV-PCSGATGAGQGYI-------WMVHRTP 135
++I+G+G++G+T A L + V V+D+ P + A G I W P
Sbjct: 3 IVILGSGVVGVTSA-YYLARAGHEVTVIDREAGPALETSFANAGQISPGYASPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKMLADSLRDQ--------------GLDPLQV 167
+ W LA+R + +W+ML + +D+ D LQ
Sbjct: 62 LKAVKWMFEKHAPLAIRLDGTMNQLQWMWQMLRNCTQDRYTVNKGRMVRLAEYSRDCLQA 121
Query: 168 I--------GWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV 219
+ + G+L + RT ++ + + L +A + E L++ +L QAEP L
Sbjct: 122 LRADTGISYEGRTGGTLQLFRTQQQFDGAGKDIAVLKDANVPFELLTADELKQAEPALAA 181
Query: 220 GED--SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
+ LP D D + + K R Y+ + L+ +N G +
Sbjct: 182 VSHKLTGGLRLPNDETGDCQMFTTRLAAMAEALGVKFR----YNTSIDALVVAN--GRIA 235
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
VQ K L + + VVA G +S L+ DL++ IPV P KG+
Sbjct: 236 GVQCGKE-LVTADSYVVALGSYSPKLLGDLVK-------IPVYPLKGY------------ 275
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
S+ A V D P + I++T D I +G + G++ +++
Sbjct: 276 ---SITAQVV---DAKRAPVSTVLDETYKIAITRFDDRI---RVGGMAEIVGYDKKLKAA 326
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG--PVPGLSKVFLAT 455
+ + + +P D A F + GLRP PDG P++G PVP L FL T
Sbjct: 327 RRETLEMCVNDLFPGGGDTASATFWT------GLRPMTPDGTPIVGRTPVPNL---FLNT 377
Query: 456 GHEGLGLSLALGTAELVADMV 476
GH LG +++ G+ +L+AD++
Sbjct: 378 GHGTLGWTMSCGSGQLLADLM 398
>gi|407368570|ref|ZP_11115102.1| FAD dependent oxidoreductase [Pseudomonas mandelii JR-1]
Length = 366
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V VQTS ++ + +V+ AG WSG DLL+ + L++PV+P KG +++ +
Sbjct: 185 VVGVQTSVGPIHGDQ-VVLTAGAWSG----DLLKSLD--LELPVEPVKGQMILYKCAADF 237
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+ +L+ A G++++GS+ + G++
Sbjct: 238 LPS------------------------MVLAKGRYAIPRRDGHILIGSTLEHEGYDKTPT 273
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+ ++ + A E P L + A+ + + GLRP P+G P IG VPG ++L
Sbjct: 274 DSALESLKASAVELIPALAE---AEVVGHWA---GLRPGSPEGIPYIGRVPGFDGLWLNC 327
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D AP+A GR
Sbjct: 328 GHYRNGLVLAPASCQLFADVMLGRAPIIDPAPYAPTGR 365
>gi|223042441|ref|ZP_03612490.1| glycine oxidase [Staphylococcus capitis SK14]
gi|417907338|ref|ZP_12551113.1| putative glycine oxidase ThiO [Staphylococcus capitis VCU116]
gi|222444104|gb|EEE50200.1| glycine oxidase [Staphylococcus capitis SK14]
gi|341596623|gb|EGS39222.1| putative glycine oxidase ThiO [Staphylococcus capitis VCU116]
Length = 372
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 119/240 (49%), Gaps = 27/240 (11%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IARQ L ++ +A++D+ VP A+ G + + T ++++
Sbjct: 3 DVLIIGSGVIGMSIARQ-LSATNYDIAIIDRDVPGKHASYKAGGMLGAQNEFTEDNDLYK 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L++SL ++ G+D I +K +G + I ++L L + + L +
Sbjct: 62 LAIESRGMFPKLSESLLNETGID----IQFKDSGLIKIANQEDDLESLTRQYEFLRQMDS 117
Query: 201 RAEYLSSSDLLQ-----AEPELMVGEDSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKG 254
+ LS+ +L+Q EP A +P D Q++A A + +H ++
Sbjct: 118 SVKLLSNDELIQLTNGNVEPAY------GAIHIPNDGQINANKYTKALFKSLQQHHITR- 170
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
+YH V + R N AV T + + ++VA+G WS L+ + E++
Sbjct: 171 ----YYHQEVQSIDRRNG---YYAVCTDQMSPIEAHKVIVASGAWSSQLLKNYSLPREVI 223
>gi|226952384|ref|ZP_03822848.1| D-amino acid oxidase [Acinetobacter sp. ATCC 27244]
gi|226836836|gb|EEH69219.1| D-amino acid oxidase [Acinetobacter sp. ATCC 27244]
Length = 377
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 160/417 (38%), Gaps = 57/417 (13%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLA 143
+ IIGAGI GL A +L SV + D+ A+ AG G + ++ W A
Sbjct: 3 IAIIGAGISGLMTALEL-AEHGCSVDIFDQQQAGQAASWAGGGILSPMYP------WRYA 55
Query: 144 LRSNKLWKMLADSLR---DQGLDPLQVIGWK--QTGSLLIGRTPEELVMLKERVKQLCEA 198
N+L K SL ++ L P+ I ++ TG L+ + E+ Q E
Sbjct: 56 PEVNQLAK-YGKSLYQSWNEKLSPITGIDFQIHNTGMLIFDQ--EDFQTGLNYATQHNEP 112
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE 258
+ + L+ L P + D F + + L + I +H +
Sbjct: 113 MQQCDLLNRIQLETVNPHISKQFDQAIYFPQLANVRNPRLLQSLIHYLKQHPCVRF---- 168
Query: 259 FYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318
F H V L+ N T V ++T + Y +V+ +G WS + R+ IP
Sbjct: 169 FEHCTVEKLIIKNKT--VHGIETEDHQQYFADQVVLTSGAWSNYWQQQVQRK------IP 220
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
V P +G +L+ + P ++ M G+
Sbjct: 221 VHPVQGQMLLFKT------------------------PENWLPTMCMNRVMYLIPRQDGH 256
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+V GSS GF+T V+ I E P+L + K GLRP P G
Sbjct: 257 IVCGSSMSECGFSTAVDAQTQQDILSACLEMVPELAQFPIV------KRWAGLRPSSPHG 310
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGRCC 495
P IG +P LS+++ GH GL + G+A+L+A ++L VD ++ C
Sbjct: 311 IPYIGAMPELSRLWANFGHFRNGLCMGAGSAKLLAQLMLDQKTFVDPHGYSPDRLAC 367
>gi|194364222|ref|YP_002026832.1| D-amino-acid dehydrogenase [Stenotrophomonas maltophilia R551-3]
gi|226722398|sp|B4SIE4.1|DADA_STRM5 RecName: Full=D-amino acid dehydrogenase small subunit
gi|194347026|gb|ACF50149.1| D-amino-acid dehydrogenase [Stenotrophomonas maltophilia R551-3]
Length = 434
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 132/311 (42%), Gaps = 50/311 (16%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL-----MVGEDSRA 225
+ G+ + RT ++L + ++ L + G+ E L + ++QAEP L +VG A
Sbjct: 133 RDLGTTQLFRTQQQLDASAQDIEILAQYGVPYEVLDRAGIIQAEPALAHVDGLVG----A 188
Query: 226 AFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT 285
LP D D L + + + G F D +T L+ S GE T
Sbjct: 189 LRLPRDQTGDCQL---FTRRLAQMCVDAGVEFRFDQD-ITGLV---SDGERITGVHVNGT 241
Query: 286 LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAG 345
L + VVA G +S +L+ L + +PV P KG+ L L
Sbjct: 242 LETADRFVVALGSYSPALVAPL------GMRLPVYPLKGYSLTLPI-------------- 281
Query: 346 YVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKR 405
D + P + +++T D I +G + AGF+ + Q + +
Sbjct: 282 ----TDPAMAPTSTILDESYKVAVTRFDDRI---RVGGMAEVAGFDLSLSQRRRETLELV 334
Query: 406 AAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLA 465
++ YPK DL A F + GLRP PDG PVIG P ++L TGH LG ++A
Sbjct: 335 VSDLYPKGGDLSRAQFWT------GLRPATPDGTPVIGATP-FRNLYLNTGHGTLGWTMA 387
Query: 466 LGTAELVADMV 476
G+ +AD++
Sbjct: 388 CGSGRYLADLM 398
>gi|423409258|ref|ZP_17386407.1| glycine oxidase ThiO [Bacillus cereus BAG2X1-3]
gi|401656255|gb|EJS73778.1| glycine oxidase ThiO [Bacillus cereus BAG2X1-3]
Length = 369
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 173/407 (42%), Gaps = 65/407 (15%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE 138
C +DV IIG G+IG ++A L VA+++K S A+ A G + + +
Sbjct: 2 CEKYDVAIIGGGVIGSSVA-HFLAERGHKVAIIEKQQIASEASKAAAGLLGVQAEWDAYD 60
Query: 139 -IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+++LA S ++ LA LR++ G+D IG+++ G I + +E KER+ +
Sbjct: 61 PLFELARESRAIFPQLATVLREKTGID----IGYEEKGIYRIAQNEDE----KERILHIM 112
Query: 197 E----AGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRH 249
+ G + +L+ L + EP E ++G A + P D + A + K H
Sbjct: 113 DWQQKTGEDSYFLTGDHLREKEPFLSESIIG----AVYYPKDGHVIA----PELTKAFAH 164
Query: 250 FASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLR 309
A+ A+ Y +R + +V + TS+ + S+K +V+A G WS L+H
Sbjct: 165 SAAISG-ADIYEQTEVFDIRIENN-KVTGIVTSEGVITSEK-VVIAGGSWSTKLLHYFQS 221
Query: 310 ETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM 369
D P KG ++ + + L E Y+
Sbjct: 222 ------DWGTYPVKGEVVAVRSRKPLLKAPIFQERFYI---------------------- 253
Query: 370 TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI 429
T G V+G++ + FN V+ I I +RA P L++ A++ S
Sbjct: 254 --TPKRGGRYVIGATMKPHTFNKTVQPESITSILERAYTILPALKE---AEWESTWA--- 305
Query: 430 GLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
GLRP P +G + ++ TGH G+ L+ + + +AD++
Sbjct: 306 GLRPQSNHEAPYMGEHEEIKGLYACTGHYRNGILLSPVSGQYMADLI 352
>gi|399157036|ref|ZP_10757103.1| Glycine/D-amino acid oxidases (Deaminating) [SAR324 cluster
bacterium SCGC AAA001-C10]
Length = 408
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 165/423 (39%), Gaps = 67/423 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
D +IIG GI G IA L S SV ++++ + T G I ++ G
Sbjct: 9 DFLIIGGGIFGCAIAWNLARRSSGSVLLLERRELATATTPRAAGLIRNLNLKQGQ----T 64
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
AL+++ +++R + + + W Q G LL+ + ++ L+ + + G
Sbjct: 65 ALKTHT-----KEAIRLLCEELEESLHWHQVGGLLVAESEANILHLEALERHAFKLGENF 119
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGRYAEFYH 261
++ ++ P L + ++ A LP D +D +LA Y + +H A E
Sbjct: 120 RWIERTEAEDLVPWLDASKANKFALLPDDGFIDPYLLATFYAKAAKKHGAVLKTEIE--- 176
Query: 262 DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKP 321
VT L +S + + VQT + + S ++ AAG W+G L E+ +P+ P
Sbjct: 177 --VTALQKSGN--RITGVQTPQGKI-SAGCVIDAAGPWAG------LVALEVGWHLPMAP 225
Query: 322 RKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVL 381
+ H + K YV IL + +G L+
Sbjct: 226 IRSHYWITSKAPEFKKPQP-----YV----------------ILPDANAYARTEMGGLLF 264
Query: 382 G---------SSRQFAGFNTEVE-------QTIIDRIWKRAAEFYPKLRDLCLADFISNR 425
G R+ TE+ +++ A FYP L + +A +I+
Sbjct: 265 GLRDRICLSHDPRELPSDFTELRFSEDPEGWNVLEEQGSELARFYPGLETIQIAHYIA-- 322
Query: 426 KVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDS 485
G Y PDG+ V+G VP + +ATG G G+ + G +AD+ + + D
Sbjct: 323 ----GPSTYTPDGQYVLGSVPDIEGFLVATGCCGSGIGASGGVGSAIADLAIEGRTRFDL 378
Query: 486 APF 488
F
Sbjct: 379 ESF 381
>gi|344204267|ref|YP_004789410.1| D-amino-acid dehydrogenase [Muricauda ruestringensis DSM 13258]
gi|343956189|gb|AEM71988.1| D-amino-acid dehydrogenase [Muricauda ruestringensis DSM 13258]
Length = 418
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 126/302 (41%), Gaps = 42/302 (13%)
Query: 190 ERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRH 249
E V++ + GL ++LS S L + EP V ++ A L + D I K
Sbjct: 156 EVVEKAAKMGLVGKHLSKSALKKIEPN--VDFNAEGAIL---WECDRHTTPPIIMKRMVE 210
Query: 250 FASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLR 309
+ K ++ VT + SN G+V + T K + Y +V AAG W+ L L
Sbjct: 211 YLEKAGVDIHKNEGVTDVSLSN--GKVTGITTEKAS-YKADEVVFAAGSWTSELSKKL-- 265
Query: 310 ETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM 369
L +P++ KG+ + +E P + IL
Sbjct: 266 ----SLKLPLQAGKGYRINVE------------------------EPTNITIPAILMEKK 297
Query: 370 TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI 429
A T + G + +F+G N + + ++ I + +Y L + + N +
Sbjct: 298 IAVTPMEGFTRFAGTMEFSGINHTIRKERVEAIARGVETYY---NGLQIPEEAKNN-AKC 353
Query: 430 GLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
GLRP PDG P IG + + +ATGH +G S+ T +LV +++ + L +D +PFA
Sbjct: 354 GLRPVSPDGLPYIGKPKNIHNLTIATGHAMMGWSMGPATGKLVTELISVDKLSMDISPFA 413
Query: 490 VQ 491
+
Sbjct: 414 TE 415
>gi|269127243|ref|YP_003300613.1| glycine oxidase ThiO [Thermomonospora curvata DSM 43183]
gi|268312201|gb|ACY98575.1| glycine oxidase ThiO [Thermomonospora curvata DSM 43183]
Length = 382
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 175/418 (41%), Gaps = 67/418 (16%)
Query: 83 DVIIIGAGIIGLTIA-RQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSE-I 139
D++++GAG+IGL A R G+ ++VA P SGA G + V T G E +
Sbjct: 9 DLLVVGAGVIGLATAWRVAARGATVTVA---DPAPGSGACHVAAGMLTPVSEVTYGEEPL 65
Query: 140 WDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
L L S + L + + G++ G L + ++L L+E + G
Sbjct: 66 LRLGLASRDRYPAFVAELEEVSG---RRTGYRGDGVLQVAFDSDDLAFLEELRRFQQSLG 122
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDS------QLDAMLAVAYIEKGNRHFASK 253
L E LS + + EP M+ R L + +L A L A ++G R +
Sbjct: 123 LTVEALSGRECRRLEP--MLAPSVRGGLLAAEDGSIDPRRLTAALLAAVEKEGVRIVRRR 180
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
+ HD V+ +++AAG WS DL E
Sbjct: 181 ATHLLVEHD------------RAAGVRLEDGEELRADMVLLAAGAWS----SDLQGLPEG 224
Query: 314 VLDIP-VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
V +P V+P KG +L L + K+ + G + S+
Sbjct: 225 V--VPQVRPVKGQVLRLRS----KIPFLE----------------RTTRGVVRGSSIYLV 262
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
G LV+G++++ GF+T V + ++ + A E P + +L + V GLR
Sbjct: 263 PREDGELVVGATQEEMGFDTTVTAGGLWQLLRDARELLPGVTELEFTE------VSAGLR 316
Query: 433 PYMPDGKPVIGP--VPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P PD PV+G +PGL FLATGH G+ L TA+++A++++ + ++APF
Sbjct: 317 PGSPDNAPVLGASALPGL---FLATGHFRNGVLLTPITADVMAEILVDGTVPPEAAPF 371
>gi|226361958|ref|YP_002779736.1| oxidoreductase [Rhodococcus opacus B4]
gi|226240443|dbj|BAH50791.1| putative oxidoreductase [Rhodococcus opacus B4]
Length = 397
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 165/412 (40%), Gaps = 66/412 (16%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTP--GS 137
T +I+G G+ GL IA L + V V+++ CSG TG G + + TP +
Sbjct: 3 ETAKFVIVGGGLEGLAIAWSLADRGETDVLVLERGTLCSGMTGKSSGVVRCHYGTPSLAA 62
Query: 138 EIW---DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQ 194
W D+ R+ +++ G D + ++Q G ++G + LK V
Sbjct: 63 MSWYGVDIFTRATEIF----------GDD----MAFRQCG-YVVGVGENNIDPLKANVAM 107
Query: 195 LCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKG 254
+ G+ +Y+ + + P L + + + A+ P + +A +A R K
Sbjct: 108 MQGLGIDVDYIGHDKMAELWPGLHLDDFAAFAYEPLGGRGEAYMAGMAFGASARKLGVKI 167
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
R + PV +L+ N+ G V V S + +++A G W+ L +
Sbjct: 168 RQST----PVASMLQ-NADGRVYGVTLSNGDEVHAEHVILATGPWAPEL------GAGVG 216
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
+DIPVK ++ L++++ + + + G + P
Sbjct: 217 VDIPVKAQRAQLVLID--QGVPTPEVPVLSDLAGLQYICREPN----------------- 257
Query: 375 VIGNLVLGSSRQFA-------GFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKV 427
G L++G+S A ++ + + I++ + P + D +
Sbjct: 258 --GELLVGNSDHAAPQYIDPDNYSNRADDSTIEKNIMKLGNRLPDMPDPRIT------SS 309
Query: 428 RIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN 479
+G PD P+IGP P + +FLATG G G ++ LVADM+L +
Sbjct: 310 YVGAYDVTPDYNPIIGPAP-VDGLFLATGFSGHGFKISPAVGRLVADMLLDD 360
>gi|407782032|ref|ZP_11129247.1| glycine oxidase ThiO [Oceanibaculum indicum P24]
gi|407206505|gb|EKE76456.1| glycine oxidase ThiO [Oceanibaculum indicum P24]
Length = 385
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 179/430 (41%), Gaps = 90/430 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMV--------HRTP 135
V IIGAG+ GL I +L + V+V ++ AG+G W P
Sbjct: 7 VAIIGAGVCGLGIGWRL-AQAGCPVSVFER-------GQAGRGASWAAAGMLAANAETEP 58
Query: 136 GSE-IWDLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
G E + L L S K+W A L+D G+D + +++TG+L+ +E L+ +
Sbjct: 59 GEESLLPLTLASQKMWPGFAVELKDASGID----VEYRETGTLVAATNRDEAEQLRFTYE 114
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+ GL E+LS ++ + EP L G A + P D Q++ NR S+
Sbjct: 115 FQRDLGLAVEWLSGAEARKREPYLRPGVPG-AIWAPDDHQVE-----------NRRL-SE 161
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSK---------NTLYSKKAIVVAAGCWSGSLM 304
A F H T L NS V ++T + L+ +V+AAG WS
Sbjct: 162 ALKAAFLHAGGT--LHENSP--VAGIETEDGRAVGVRVGDDLHKADIVVLAAGSWS---- 213
Query: 305 HDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQI 364
D+ + L PV+P KG +L L L + + A
Sbjct: 214 RDIPGLPQAALP-PVRPVKGQMLSLCMDPKAPLATSVLWAP------------------- 253
Query: 365 LSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ----TIIDRIWKRAAEFYPKLRDLCLAD 420
I + D G L++G++ + G + E+ ++D W+ P + +L +
Sbjct: 254 -KIYLVPRAD--GRLIVGATVEEKGHDPELTAGGVLALLDAAWR----AIPAIEELPI-- 304
Query: 421 FISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNP 480
++ +G RP D P++G G + +ATGH G+ LA TA+ +A +LT
Sbjct: 305 ----EEMWVGFRPTSRDDAPILGET-GTDGLLVATGHHRNGILLAPITADAIARQILTGS 359
Query: 481 LKVDSAPFAV 490
++APF +
Sbjct: 360 PLPEAAPFTL 369
>gi|423601815|ref|ZP_17577815.1| glycine oxidase ThiO [Bacillus cereus VD078]
gi|401228938|gb|EJR35458.1| glycine oxidase ThiO [Bacillus cereus VD078]
Length = 369
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 171/403 (42%), Gaps = 57/403 (14%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE 138
C +DV IIG G+IG ++A LV VA+V+K S A+ A G + + +
Sbjct: 2 CKKYDVAIIGGGVIGSSVA-HFLVERGHKVAIVEKQRIASEASKAAAGLLGVQAEWDAYD 60
Query: 139 -IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+++LA S ++ LA LR++ G+D IG+++ G I + +E + +
Sbjct: 61 PLFELARESRAIFPQLAAVLREKTGID----IGYEEKGIYRIAQNEDEKKRILHIMDWQQ 116
Query: 197 EAGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+ G + +L+ L + EP E ++G A + P D Q+ A + K H A+
Sbjct: 117 KTGEDSRFLTGDHLREKEPFLSESIIG----AVYYPKDGQVIA----PELTKAFAHSAAI 168
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
A+ Y +R + +V + TS+ + +K +V+A G WS L+H
Sbjct: 169 SG-ADIYEQTEVFDIRIENN-KVTGIVTSEGVITCEK-VVIAGGSWSTKLLHYFQS---- 221
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
D P KG ++ + + L E Y+ T
Sbjct: 222 --DWGTYPVKGEVVAVRSKRLLLKAPIFQERFYI------------------------TP 255
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
G V+G++ + FN V+ I I +RA P L++ A++ S GLRP
Sbjct: 256 KRGGRYVIGATMKPHTFNKSVQPESITSILERAYTILPALKE---AEWESTWA---GLRP 309
Query: 434 YMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
P +G + ++ TGH G+ L+ + + +AD++
Sbjct: 310 QSNHEAPYMGEHEEIKGLYACTGHYRNGILLSPVSGQYMADLI 352
>gi|213971052|ref|ZP_03399172.1| oxidoreductase, FAD-binding [Pseudomonas syringae pv. tomato T1]
gi|301384225|ref|ZP_07232643.1| oxidoreductase, FAD-binding protein [Pseudomonas syringae pv.
tomato Max13]
gi|302060851|ref|ZP_07252392.1| oxidoreductase, FAD-binding protein [Pseudomonas syringae pv.
tomato K40]
gi|302132884|ref|ZP_07258874.1| oxidoreductase, FAD-binding protein [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|213924160|gb|EEB57735.1| oxidoreductase, FAD-binding [Pseudomonas syringae pv. tomato T1]
Length = 367
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
V+ +R S V V T + + +++ AG WSG L+ L LD+PV+P K
Sbjct: 174 VSGFVREGS--RVSGVSTPSGDVTGDR-VILTAGAWSGDLLKTL------GLDLPVEPVK 224
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
G +++ Y D G +L+ A G++++GS
Sbjct: 225 GQMIL-----------------YKCASDFL-------SGMVLAKGRYAIPRRDGHILIGS 260
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
+ + GF+ Q ++ + A E P+L + A+ I+ GLRP P+G P IG
Sbjct: 261 TLEHEGFDKTTTQAALESLKASAIELLPELAN---AEPIAQWA---GLRPGSPEGIPFIG 314
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
P+ G ++L GH GL LA + +L+ D++L +D AP+ GR
Sbjct: 315 PLAGFDGLWLNCGHYRNGLVLAPASCQLLTDLLLGRRPIIDPAPYLPLGR 364
>gi|289674863|ref|ZP_06495753.1| FAD dependent oxidoreductase [Pseudomonas syringae pv. syringae
FF5]
Length = 240
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 37/217 (17%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
+ VQT + + +++AAG WSG L+ L L++PV+P KG +++ + +
Sbjct: 57 ISGVQTPAGDITGDQ-VILAAGAWSGELLKTL------GLELPVEPVKGQMILYKCASDF 109
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+SM +L+ A G++++GS+ + GF+
Sbjct: 110 L---SSM---------------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKTTT 145
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
Q ++ + A E P L A+ ++ GLRP P+G P IGP+ G ++L
Sbjct: 146 QAALESLKASAVELLPPLAH---AEPVAQWA---GLRPGSPEGIPFIGPLEGFDGLWLNC 199
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQG 492
GH GL LA + +L+ D++L +D AP+A G
Sbjct: 200 GHYRNGLVLAPASCQLITDLLLEREPIIDPAPYAPAG 236
>gi|449017723|dbj|BAM81125.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 781
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 125/289 (43%), Gaps = 45/289 (15%)
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFL-PYDSQLD--AMLAVAYIEKGNRHFASKGRYAE 258
A +LS+ + Q EP L A+L P D Q+D A++ + GN R E
Sbjct: 183 AYFLSADEARQLEPGLTSDAQLAGAWLFPQDGQVDNVALMEALTLACGNLGV----RLME 238
Query: 259 FYHDPVTCLL--RSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
+CL+ R T +EAV+ + L A ++A+G W+ L +
Sbjct: 239 GNE--ASCLVAARHGKTQRIEAVRLASGNLLYGNAFILASGAWARQL-----------VP 285
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
+PVKP+KG +L + G DL + +V +G L + A +
Sbjct: 286 VPVKPQKGQMLSIS------------APGAATAMDLLVR--RVLYGADLYM---APKRLS 328
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
G +V+GS+ + AGF+ I + +R + P L D L S G RP P
Sbjct: 329 GKIVIGSTVEDAGFDNRCTARGISGLLQRLEKLCPALADWTLDRTWS------GFRPLTP 382
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDS 485
D P++GP S ++ A GH G+ LA A++VAD VL +D+
Sbjct: 383 DLLPILGPSMEYSNMYYALGHWRNGILLAPLVAQVVADQVLGTSPTLDT 431
>gi|386819351|ref|ZP_10106567.1| glycine/D-amino acid oxidase, deaminating [Joostella marina DSM
19592]
gi|386424457|gb|EIJ38287.1| glycine/D-amino acid oxidase, deaminating [Joostella marina DSM
19592]
Length = 416
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 142/364 (39%), Gaps = 48/364 (13%)
Query: 129 WMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGL--DPLQVIGWKQTGSLLIGRTPEELV 186
W H++ E A+ K +L+ L L D +K G L++ +T +
Sbjct: 91 WYFHKSSTHEKVAKAIPVIKEINVLSRELYKDILASDDFGSFHFKHEGLLMLYKTEQAGA 150
Query: 187 MLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKG 246
E K+ GL A +L +L + EP + + D++ A + DA I
Sbjct: 151 DEFEVAKKAQFEGLEARHLDKDELDKLEPNVQI--DAKGAIF---YECDAHSTPTEIMPK 205
Query: 247 NRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHD 306
+ + V + SN +V V T KNT Y+ +VVA+G WS +
Sbjct: 206 MLAYLKANGVVVKTDETVENIEVSNE--KVTKVITDKNT-YTPDEVVVASGSWSNEIA-- 260
Query: 307 LLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILS 366
+I IP++ KG+ + L ++ L MEA
Sbjct: 261 ----KKIGAKIPLQAGKGYRIDLHKSTNITLPAILMEAK--------------------- 295
Query: 367 ISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRK 426
A T + G + +F+G N + + ++ I A +YP++ + S K
Sbjct: 296 ---VAMTPMNGFTRFAGTMEFSGINKTIRKQRVEAIANAAKNYYPEI------EITSEEK 346
Query: 427 --VRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVD 484
+ GLRP PDG P IG V ATGH +G SL T +LV +++ +D
Sbjct: 347 DLAQSGLRPVSPDGMPYIGRTNYCKNVIFATGHAMMGWSLGPATGKLVTEIINNTKPSMD 406
Query: 485 SAPF 488
A F
Sbjct: 407 LAAF 410
>gi|419962898|ref|ZP_14478884.1| sarcosine oxidase subunit beta [Rhodococcus opacus M213]
gi|414571760|gb|EKT82467.1| sarcosine oxidase subunit beta [Rhodococcus opacus M213]
Length = 397
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 164/412 (39%), Gaps = 66/412 (16%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTP--GS 137
T +I+G G+ GL IA L + V V+++ CSG TG G + + TP +
Sbjct: 3 QTAKFVIVGGGLEGLAIAWSLADRGETDVLVLERDTLCSGMTGKSSGVVRCHYGTPSLAA 62
Query: 138 EIW---DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQ 194
W D+ R+ +++ G D + ++Q G ++G + LK V
Sbjct: 63 MSWYGVDIFTRATEIF----------GDD----MAFRQCG-YVVGVGENNIDPLKANVAM 107
Query: 195 LCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKG 254
+ G+ +Y+ + + P L +G+ + A+ P + +A +A R
Sbjct: 108 MQGLGIDVDYIGHDKMAELWPGLHLGDFAAFAYEPLGGRGEAYMAGMAFGASARKLGVTI 167
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
R + PV LL+ N+ G V V + + +++A G W+ L +
Sbjct: 168 RQST----PVASLLQ-NADGRVYGVTLANGDEVHAEQVILATGPWAPEL------GAGVG 216
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
+DIPVK ++ L++++ + + + G + P
Sbjct: 217 VDIPVKAQRAQLVLID--QGVPTPEVPVLSDLAGLQYICREPN----------------- 257
Query: 375 VIGNLVLGSSRQFA-------GFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKV 427
G L++G+S A + + + I++ + P + D +
Sbjct: 258 --GELLVGNSDHAAPEYIDPDKYRNRADDSTIEKNIGKLGNRLPDMPDPRIT------SS 309
Query: 428 RIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN 479
+G PD P+IGP P + +FLATG G G ++ LVADM+L +
Sbjct: 310 YVGAYDVTPDYNPIIGPAP-VDGLFLATGFSGHGFKISPAVGRLVADMLLDD 360
>gi|357383251|ref|YP_004897975.1| D-amino acid dehydrogenase family protein in hydroxy-L-proline
catabolic cluster [Pelagibacterium halotolerans B2]
gi|351591888|gb|AEQ50225.1| D-amino acid dehydrogenase family protein in hydroxy-L-proline
catabolic cluster [Pelagibacterium halotolerans B2]
Length = 410
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 41/222 (18%)
Query: 268 LRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLL 327
+R TG +E + +N+ + + +VVAAG SG L L L++P++ +G+ +
Sbjct: 224 IRPTETG-MELIGPGENSTFDR--VVVAAGAHSGGLTQQL------GLNLPLETERGYNV 274
Query: 328 VLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQF 387
L G DL H HG ++S IG+ +
Sbjct: 275 SLPE----------------GAFDLRTHLTFAGHGFVVS--------RIGDGIRVGGGVE 310
Query: 388 AGFNTEVEQT-IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVP 446
G + D + +AA F P+LR + + +G RP MPD PVI P
Sbjct: 311 LGGLELAPRMGRADALLAKAARFLPELR-------TAGGRRWMGFRPSMPDSLPVIDVAP 363
Query: 447 GLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
G +V LA GH LGL+ + GTAE+VAD+V P +D APF
Sbjct: 364 GNPRVILAFGHGHLGLTQSAGTAEIVADLVDDAPPAIDMAPF 405
>gi|384264705|ref|YP_005420412.1| glycine oxidase [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|387897668|ref|YP_006327964.1| sarcosine oxidase [Bacillus amyloliquefaciens Y2]
gi|380498058|emb|CCG49096.1| glycine oxidase [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|387171778|gb|AFJ61239.1| sarcosine oxidase [Bacillus amyloliquefaciens Y2]
Length = 369
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 146/348 (41%), Gaps = 61/348 (17%)
Query: 139 IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCE 197
+D A+ S +L++ L + G+D I G L + T E++ L+ ++ L
Sbjct: 62 FFDFAMHSQRLYEAAGQELEEACGID----IRRHNGGMLKLAYTEEDIARLR-KMDDLPS 116
Query: 198 AGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKG 254
+LS+ D L+ EP + ++G A+F+ D ++ KG R + +
Sbjct: 117 ----VTWLSAKDALEKEPYASKDILG----ASFIKDDVHVEPYYVCKAYAKGARRYGAH- 167
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
+ H VT + R N GE + TS +Y+ K + VA+G WSG +++
Sbjct: 168 ---IYEHTQVTSVKRVN--GEY-CITTSGGDVYADK-VAVASGVWSGRFF------SQLG 214
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
L P P KG L + N D T + H + +
Sbjct: 215 LGQPFFPVKGECLSVWN-------------------DDTPLTKTLYHDHCYVVPRKS--- 252
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
G LV+G++ + ++ + I+ + +A P + + + F + GLRP
Sbjct: 253 --GRLVIGATMKQGDWSDTPDIGGIEAVIAKAKTMLPAIEHMKIDRFWA------GLRPG 304
Query: 435 MPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLK 482
DGKP IG P S + A GH G+ LA TAE+V DM+L +K
Sbjct: 305 TRDGKPFIGRHPEDSGIIFAAGHFRNGILLAPATAEMVRDMILERQIK 352
>gi|431799266|ref|YP_007226170.1| glycine/D-amino acid oxidase, deaminating [Echinicola vietnamensis
DSM 17526]
gi|430790031|gb|AGA80160.1| glycine/D-amino acid oxidase, deaminating [Echinicola vietnamensis
DSM 17526]
Length = 416
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 113/283 (39%), Gaps = 50/283 (17%)
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAM----LAVAYIEKGNRHFAS 252
E+GLRAE LS D+ + EP V + + P D+ L L ++EK
Sbjct: 160 ESGLRAEILSKDDIRKLEPHHEV-DVLGGVYFPDDAHLSPKDLYRLLKNHLEKSGVQLQR 218
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312
VT S G V AV T++ + + ++V AG WSG + L
Sbjct: 219 N----------VTITGFEKSAGNVNAVMTNEGKIDCGQ-VMVCAGSWSGEIAKML----- 262
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
+P+ KG+ L N LK IL+ + +
Sbjct: 263 -GFRLPMMGGKGYSFELPNTPELK------------------------QASILTEARVSQ 297
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
+ + G + + + ++ + I++ +YP+ + A F S K+ G+R
Sbjct: 298 SPYGEKVRFGGTMEISSHVDKINMRRVQGIFESIKAYYPEFK----AAFPSQDKIWKGMR 353
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADM 475
P PDG P IG PG V GH +G+SLA T +L+AD+
Sbjct: 354 PCSPDGLPYIGKAPGWENVAFGAGHSMMGVSLAPATGKLLADL 396
>gi|298160101|gb|EFI01132.1| Glycine oxidase ThiO [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 370
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 39/230 (16%)
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
V+ +R S V V T + + +++AAG WSG L+ L LD+PV+P K
Sbjct: 174 VSGFVREGS--RVSGVSTPSGDVTGDR-VILAAGAWSGELLKTL------GLDLPVEPVK 224
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
G +++ + + +SM +L+ A G++++GS
Sbjct: 225 GQMILYKCASDFL---SSM---------------------VLAKGRYAIPRRDGHILIGS 260
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
+ + GF+ ++ + A E P+L + A+ ++ GLRP P+G P IG
Sbjct: 261 TLEHEGFDKTATHAALESLKASAIELLPELAN---AEPVAQWA---GLRPGSPEGIPFIG 314
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
P+ G ++L GH GL LA + +L+ D++L +D AP+ GR
Sbjct: 315 PLAGFDGLWLNCGHYRNGLVLAPASCQLITDLLLNREPIIDPAPYTPLGR 364
>gi|455650693|gb|EMF29455.1| glycine oxidase [Streptomyces gancidicus BKS 13-15]
Length = 388
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 183/429 (42%), Gaps = 74/429 (17%)
Query: 77 SRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG 136
S T DV+++G GIIGL A + + L+ AVVD P GA G + V
Sbjct: 2 SPTRTADVLVVGGGIIGLVTAWRA-AQAGLATAVVDPE-PGGGAARVAAGMLAAVTELHH 59
Query: 137 SE--IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
E + L L S + + A L D+ G D +G+++ G+L + ++ L+E
Sbjct: 60 GEQTLLGLNLASARRYPGFAAELTDRTGQD----LGYRRCGTLAVALDADDRAHLRELHA 115
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLD------AMLAVAYIEKG 246
+GL +++L+ + + EP L G R + D Q+D A+L+ +
Sbjct: 116 LHQRSGLDSQWLTGRECRRLEPMLAPG--VRGGLRVDGDHQIDPRRLASALLSACELSGV 173
Query: 247 NRHFASKGRYAEFYHDPVTCLLRSNSTGE-VEAVQTSKNTLYSKKAIVVAAGCWSGSLMH 305
H A R TG+ V T+ + +V+AAG WSG L
Sbjct: 174 TLHRARAERLV--------------VTGDRARGVVTTAGEELAAGQVVLAAGSWSGRLAG 219
Query: 306 DLLRETEIVLDIPVKPRKGHLLVL------ENFNSLKLNHASMEAGYVGHHDLTLHPGQV 359
E++ PV+P KG +L L E F S ++ A G H + L P +
Sbjct: 220 ---VPAEVL--PPVRPVKGQVLRLTMPDRPEPFLS-----RTVRAVVRGSH-VYLVPRES 268
Query: 360 NHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLA 419
G LV+G++ + G++T V + + + A E P L +L L
Sbjct: 269 -----------------GELVIGATSEELGWDTTVTAGGVYELLRDAHELVPGLTELPLT 311
Query: 420 DFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN 479
+ + GLRP PD P++GP GL + LATGH G+ L T + +A ++ T
Sbjct: 312 ETTA------GLRPGSPDNAPLLGPT-GLDGLLLATGHHRNGVLLTPVTGDAMARVLTTG 364
Query: 480 PLKVDSAPF 488
L ++ PF
Sbjct: 365 ELPDEALPF 373
>gi|427734262|ref|YP_007053806.1| glycine/D-amino acid oxidase, deaminating [Rivularia sp. PCC 7116]
gi|427369303|gb|AFY53259.1| glycine/D-amino acid oxidase, deaminating [Rivularia sp. PCC 7116]
Length = 374
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 186/419 (44%), Gaps = 73/419 (17%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMV--HRTPGSEIWD 141
++I+G GIIG T+A +L + L + VVDK P ATGA G + + H+ G
Sbjct: 4 IVIVGCGIIGATLAYELSLIEGLKITVVDKQPPAQAATGAALGVLMGIISHKVKG----- 58
Query: 142 LALRSNKLWKMLADSLRDQG--LDPLQVIGWKQT-----GSLLIGRTPE---ELVMLKER 191
K W+M S++ G + L+ I K+ G L++ +P+ + + E+
Sbjct: 59 ------KAWRMRQTSVQRYGTLIPELEAITNKKIPFNRQGILMLLPSPQVTADDLPFWEK 112
Query: 192 VKQLCE-AGLRAEYLSSSDLLQAEPELMVG--EDSRAAFLPYDSQLD-AMLAVAYIEKGN 247
+KQ + G + E L + L + P++ V E A P D QLD +A +E
Sbjct: 113 LKQTRQNQGWQLEILDKAQLSKICPQVDVSSREYIGAIHSPQDRQLDPTAFTLALVE--- 169
Query: 248 RHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT--LYSKKAIVVAAGCWSGSLMH 305
A++ F ++S+S E + + + T + + +++AG S L
Sbjct: 170 ---AAQQNGVNFRFGVNVLGMKSSSDRENSSTRELETTEGVIAADTFIISAGLGSSLLTE 226
Query: 306 DLLRETEI--VLDIPVKPRKGHLLVLENFN-SLKLNHASMEAGYVGHHDLTLHPGQVNHG 362
L ++ +I VL + R GH L F ++ N Y+ ++P
Sbjct: 227 QLNQKVDIRPVLGQAIHLRLGHPLAKSEFQPAITCNDT-----YIVPCGAGVYP------ 275
Query: 363 QILSISMTATTDVIGNLVLGSSRQFAGFNTEV--EQTIIDRIWKRAAEFYPKLRDLCLAD 420
TTD +G++ +F+ + E+ ++ ++D K A P +L AD
Sbjct: 276 ---------TTDYW----VGATVEFSQDDGELSADKELLDNSLKGAIATCP---ELAKAD 319
Query: 421 FISNRKVRIGLRPYMPDGKP--VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
I + GLRP P+G+P VI +PG V LA+ H G+ LA TAE+V +MVL
Sbjct: 320 VI---RTWSGLRPR-PEGRPAPVIEKLPGYDNVILASAHYRNGVLLAPATAEMVKEMVL 374
>gi|83592881|ref|YP_426633.1| FAD dependent oxidoreductase [Rhodospirillum rubrum ATCC 11170]
gi|386349611|ref|YP_006047859.1| FAD dependent oxidoreductase [Rhodospirillum rubrum F11]
gi|83575795|gb|ABC22346.1| FAD dependent oxidoreductase [Rhodospirillum rubrum ATCC 11170]
gi|346718047|gb|AEO48062.1| FAD dependent oxidoreductase [Rhodospirillum rubrum F11]
Length = 419
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 119/293 (40%), Gaps = 49/293 (16%)
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAE 258
GLR ++ L+ EP L G +L + A E G+ H ++G A
Sbjct: 162 GLRQSACPAARCLELEPALATG----------GVRLAGGILAAEDESGDAHLFTQGLAAL 211
Query: 259 FYHDPVTCLLRSNSTG------EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312
V L + TG V V TS+ L + IV+AAG +S L
Sbjct: 212 SAAKGVRFLGETTITGLRLEGRRVAEVLTSRGPLRADT-IVLAAGSFSPGLAR------T 264
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTAT 372
I L +PV P KG+ + L+ ++ A A + D GQ L + TA
Sbjct: 265 IGLRLPVYPAKGYSITLD------VDGAGQGAPTLSITDEASKMVYSRLGQRLRAAGTA- 317
Query: 373 TDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
+ AG++ I + AA +PK D A + GLR
Sbjct: 318 -------------ELAGWSLTPNPARAALIRREAARLFPKAGDYARA------RDWCGLR 358
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDS 485
P PD P+IG PG+ +FL TGH LG ++A G+ +L+AD++ +D+
Sbjct: 359 PTTPDSVPIIGKAPGIDNLFLNTGHGTLGWTMACGSGKLIADLISGRATDIDT 411
>gi|170078955|ref|YP_001735593.1| FAD dependent oxidoreductase, putative [Synechococcus sp. PCC 7002]
gi|169886624|gb|ACB00338.1| FAD dependent oxidoreductase, putative [Synechococcus sp. PCC 7002]
Length = 367
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 173/416 (41%), Gaps = 64/416 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIW-MVHRTPGSEIWDL 142
V+I+GAG++G IA +L + V+D P G+TGA G + ++ R W L
Sbjct: 5 VVILGAGVVGAAIAYELSQLDQFKITVLDTAQPARGSTGAALGMLMGIISRKTKGRAWTL 64
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEA-GLR 201
RS + + L + L G Q + G L + R PEEL +R+++L +A G +
Sbjct: 65 RRRSMERFPRLLEELAAAG----QPVPHNSHGILKLLREPEELEK-GDRLRELRQASGWQ 119
Query: 202 AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLD------AMLAVAYIEKGNRHFASKGR 255
+ Q P L E + F P D Q+ A+LAVA + +F
Sbjct: 120 LAIWDQEIIQQHCPHLQAKEAAGGIFSPQDFQVQPVPFTKALLAVAQQNGAHCYFGISQP 179
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
E + + + T +N+ Y ++V+AG S + L +E +
Sbjct: 180 KLEI------------TDQHCQKISTDQNS-YPCDWLIVSAGLGSLEVTKHL---SESLS 223
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHP-GQVNHGQILSISMTATTD 374
PV + HL V + KL + V D+ + P GQ + ++ A T
Sbjct: 224 LGPVLGQAFHLRVPK-----KLEPQTPFQPVVSFEDIHVVPLGQGEYWVGATVEFPAET- 277
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY 434
G ++ T+ D++ ++A FYP L++ + S ++ R
Sbjct: 278 -------------GGITPDI--TLADQVLQKAIAFYPLLKNAEILRHWSGKRPR------ 316
Query: 435 MPDGK--PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P+G+ PV+ + G + LATGH G+ LA TA + D +L ++ PF
Sbjct: 317 -PNGQGAPVLKGLAGYDNILLATGHYRNGVLLAPATALTIRDWLLAP----ETIPF 367
>gi|73663791|ref|YP_302571.1| glycine D-amino acid oxidase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72496361|dbj|BAE19626.1| glycine D-amino acid oxidase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 370
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 179/405 (44%), Gaps = 64/405 (15%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIW 140
+DVIIIG+G++G++IAR L S ++AV+D+ A+ G + + T S ++
Sbjct: 2 YDVIIIGSGVMGMSIARG-LSQSFANIAVIDRDEAGKHASYKAGGMLGAQNEFTKNSALF 60
Query: 141 DLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
LA S K++K L DSL ++ G+D I + +G + + + ++++ + L +
Sbjct: 61 SLATTSQKMFKPLRDSLLEEVGVD----IEYLNSGLIKLATNHYDNKKIEQQYQFLRQHF 116
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEK--GNRHFASKGRYA 257
E LS +D+ + + + ++P D+Q++A + K NRH
Sbjct: 117 ASVERLSPTDVQHMSNGAITSKHTNGIYMPEDNQINANRYTKGLLKSLSNRHI------D 170
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
Y VT + VE ++N Y + ++V G W+G L+ L E V+ +
Sbjct: 171 RIYQTTVTHIESIKDGYRVE----TRNGAYYTEKLIVTGGAWTGKLLQQYL-PCETVIGV 225
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
KG L++E DL L+ +++ +T VI
Sbjct: 226 -----KGEALLVE------------------QPDLNLN---------ITMFLTNGCYVIP 253
Query: 378 NL----VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
L ++G++ F ++ V + + +A + P L++ + + S G+RP
Sbjct: 254 KLKNRYLIGATSYFNDYSVGVSNSGKSWLKSQALHYIPDLKNGKIINQWS------GIRP 307
Query: 434 YMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLT 478
Y + +P++ V +F+ GH G+ L+ EL++ +++
Sbjct: 308 YCQNEQPIMDEVD--KDLFVIAGHYRNGILLSPLIGELMSQWIIS 350
>gi|397688381|ref|YP_006525700.1| FAD-binding oxidoreductase [Pseudomonas stutzeri DSM 10701]
gi|395809937|gb|AFN79342.1| FAD-binding oxidoreductase [Pseudomonas stutzeri DSM 10701]
Length = 363
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 39/229 (17%)
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H PV L++ V V+T++ + + +V+AAG WS +L+ L L++PVK
Sbjct: 167 HSPVGALIQEGR--RVVGVRTAEGE-WRGEQVVMAAGAWSAALLAPL------GLELPVK 217
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P KG +++ Y D +L+ A G+++
Sbjct: 218 PMKGQMIL-----------------YKCAEDFL-------PSMVLAKRRYAIPRRDGHIL 253
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GS+ + GF+ + ++ + A E P L + + K GLRP PDG P
Sbjct: 254 VGSTLEDVGFDKAPTEDALESLKATAVELLPALANSEVV------KHWAGLRPGSPDGVP 307
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
IG V G ++L GH GL LA + +L+AD++L +D AP+A
Sbjct: 308 YIGAVSGFDGLWLNCGHFRNGLVLAPASCQLLADLMLGRKPSIDPAPYA 356
>gi|418062477|ref|ZP_12700259.1| glycine oxidase ThiO [Methylobacterium extorquens DSM 13060]
gi|373563967|gb|EHP90114.1| glycine oxidase ThiO [Methylobacterium extorquens DSM 13060]
Length = 440
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 175/407 (42%), Gaps = 56/407 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIW-MVHRTPGSEIWD 141
DV ++GAG+IGL+IA QL + SVAVV++ SGA+ A G + PGS++
Sbjct: 58 DVAVVGAGLIGLSIAWQL-AQAGRSVAVVERGNVGSGASLAATGMLAPAAEHEPGSDLLL 116
Query: 142 LALRSN-KLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
+ + W D+L+ + I ++ G+L+I +E+ L+ R +G+
Sbjct: 117 PLALESLRRWPAFRDALQAASG---REIDYRTDGTLVIAIGRDEVERLRFRHDLQRRSGV 173
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFA---SKGRYA 257
AE+LS ++ EP L+ + P D+Q+D L + + + S+G
Sbjct: 174 AAEWLSGPEVRAREP-LLRPNVTAGILCPLDAQVDPRLVMEALLRACEAAGVVISEGVAV 232
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG--SLMHDLLRETEIVL 315
E G V + + TL + +++AAG WSG SL+ L + L
Sbjct: 233 EGLE---------RRGGRVTGLHAAGRTL-AADTVILAAGAWSGDASLLPSDLDVPD--L 280
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+PV+P KG L L + G + T ++ M D
Sbjct: 281 SVPVRPLKGQSLALRT---------TKRTGTLSRMVWT-----------DAVHMAPKGD- 319
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G+L++G++ + GF + V + + + A P + ++ + S G RP
Sbjct: 320 -GHLIVGATVEDCGFTSGVTAGGMFALLEGARRVLPGIEEMEIDAVWS------GFRPTS 372
Query: 436 PDGKPVI-GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPL 481
D P+I PGL LATGH G LA TA+ VA ++ L
Sbjct: 373 DDDAPIIEEAAPGL---VLATGHHRNGYLLAPATADAVATLLTEGAL 416
>gi|444377250|ref|ZP_21176482.1| D-amino acid dehydrogenase small subunit [Enterovibrio sp. AK16]
gi|443678540|gb|ELT85208.1| D-amino acid dehydrogenase small subunit [Enterovibrio sp. AK16]
Length = 417
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 128/308 (41%), Gaps = 43/308 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL--MVGEDSRAAFL 228
+Q G+L I R ++L +++ + L ++G R + ++ D ++ EP L + + + +L
Sbjct: 133 RQKGTLQIFRNQKQLDAVEKDIALLEQSGTRYQRMTIEDCIKQEPGLASVSHKLTGGLYL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + + +K EF D ++ T + +V T K L
Sbjct: 193 PDDETGDCYLFCQQMTE-----LAKAHGVEFMFDTEVKNVKREGT-RIVSVVTDKGEL-E 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S M L L IPV P KG+ L V
Sbjct: 246 ADAYVVAMGSYSTKFMAGL------GLSIPVYPVKGYSLT------------------VP 281
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D T P + +++T D I + + + AGF+ + + I +
Sbjct: 282 ITDETQAPTSTVMDETYKVALTRFDDRI---RVAGTAELAGFDPSIPEKRKATISMVVKD 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P D A+F + G RP PDG P+IG P +F TGH LG ++A G+
Sbjct: 339 LFPHSGDFDKAEFWT------GFRPMTPDGTPLIGKTP-FDNLFTNTGHGTLGWTMACGS 391
Query: 469 AELVADMV 476
L+A ++
Sbjct: 392 GHLLAQII 399
>gi|70732615|ref|YP_262378.1| glycine oxidase [Pseudomonas protegens Pf-5]
gi|68346914|gb|AAY94520.1| glycine oxidase ThiO [Pseudomonas protegens Pf-5]
Length = 366
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
G++++GS+ + GF+ + ++ + A E P L + A+ + + GLRP P
Sbjct: 255 GHILVGSTLEHEGFDKTPTVSALESLKASAVELIPALAE---AEVVGHWA---GLRPGSP 308
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
+G P +GPVPG + ++L GH GL LA + +L D++L NP +D AP+A +GR
Sbjct: 309 EGIPYVGPVPGFAGLWLNCGHYRNGLVLAPASCQLFCDLLLGNPPIIDPAPYAPEGR 365
>gi|308173132|ref|YP_003919837.1| FAD-dependent glycine oxidase [Bacillus amyloliquefaciens DSM 7]
gi|384159938|ref|YP_005542011.1| FAD-dependent glycine oxidase [Bacillus amyloliquefaciens TA208]
gi|384163639|ref|YP_005545018.1| FAD-dependent glycine oxidase [Bacillus amyloliquefaciens LL3]
gi|384169002|ref|YP_005550380.1| glycine oxidase [Bacillus amyloliquefaciens XH7]
gi|307605996|emb|CBI42367.1| FAD-dependent glycine oxidase [Bacillus amyloliquefaciens DSM 7]
gi|328554026|gb|AEB24518.1| FAD-dependent glycine oxidase [Bacillus amyloliquefaciens TA208]
gi|328911194|gb|AEB62790.1| FAD-dependent glycine oxidase [Bacillus amyloliquefaciens LL3]
gi|341828281|gb|AEK89532.1| glycine oxidase [Bacillus amyloliquefaciens XH7]
Length = 369
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 151/349 (43%), Gaps = 63/349 (18%)
Query: 139 IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCE 197
+D A+ S +L++ L + G+D I G L + T E+++ L+ ++ L
Sbjct: 62 FFDFAMYSQRLYEAAGRELEEACGID----IRRHNGGMLKLAYTEEDIIRLR-KMDDLPS 116
Query: 198 AGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKG 254
+LS+ + L+ EP + ++G A+F+ D ++ KG R +
Sbjct: 117 V----TWLSAEEALEKEPYASKDILG----ASFIKDDVHVEPYYVCKAYAKGARRYG--- 165
Query: 255 RYAEFY-HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
A+ Y H VT + R N + TS +Y+ + + VA+G WSG +++
Sbjct: 166 --ADIYEHTHVTAVKRVNGAF---CITTSGGDVYADQ-VAVASGVWSGRFF------SQL 213
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
L P P KG L + N +H + TL+ HGQ + +
Sbjct: 214 GLGQPFFPVKGECLSVWN------DHIPLTK--------TLY-----HGQSYVVPRKS-- 252
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
G LV+G++ + ++ + I+ + +A P + + + F + GLRP
Sbjct: 253 ---GRLVIGATMKQGDWSDTPDIGGIEAVISKAKTMLPAIEHMKIDRFWA------GLRP 303
Query: 434 YMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLK 482
DGKP IG P S + A GH G+ LA TAE+V DM+L +K
Sbjct: 304 GTRDGKPFIGRHPEDSGIIFAAGHFRNGILLAPATAEMVRDMILGKQVK 352
>gi|422659764|ref|ZP_16722186.1| oxidoreductase, FAD-binding protein [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331018379|gb|EGH98435.1| oxidoreductase, FAD-binding protein [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 367
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 39/230 (16%)
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
V+ +R S V V T + + +++ AG WSG L+ L LD+PV+P K
Sbjct: 174 VSGFVREGS--RVSGVSTPSGDVTGDR-VILTAGAWSGDLLKTL------GLDLPVEPVK 224
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
G +++ + + +SM +L+ A G++++GS
Sbjct: 225 GQMILYKCASDFL---SSM---------------------VLAKGRYAIPRRDGHILIGS 260
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
+ + GF+ Q ++ + A E P+L + A+ I+ GLRP P+G P IG
Sbjct: 261 TLEHEGFDKTTTQAALESLKASAIELLPELAN---AEPIAQWA---GLRPGSPEGIPFIG 314
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
P+ G ++L GH GL LA + +L+ D++L +D AP++ GR
Sbjct: 315 PLAGFDGLWLNCGHYRNGLVLAPASCQLLTDLLLGRKPIIDPAPYSPLGR 364
>gi|28868045|ref|NP_790664.1| oxidoreductase, FAD-binding protein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|28851281|gb|AAO54359.1| oxidoreductase, FAD-binding protein [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 367
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 39/230 (16%)
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
V+ +R S V V T + + +++ AG WSG L+ L LD+PV+P K
Sbjct: 174 VSGFVREGS--RVSGVSTPSGDVTGDR-VILTAGAWSGDLLKTL------GLDLPVEPVK 224
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
G +++ + + +SM +L+ A G++++GS
Sbjct: 225 GQMILYKCASDFL---SSM---------------------VLAKGRYAIPRRDGHILIGS 260
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
+ + GF+ Q ++ + A E P+L + A+ I+ GLRP P+G P IG
Sbjct: 261 TLEHEGFDKTTTQAALESLKASAIELIPELAN---AEPIAQWA---GLRPGSPEGIPFIG 314
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
P+ G ++L GH GL LA + +L+ D++L +D AP++ GR
Sbjct: 315 PLAGFDGLWLNCGHYRNGLVLAPASCQLLTDLLLGRKPIIDPAPYSPLGR 364
>gi|423609295|ref|ZP_17585156.1| glycine oxidase ThiO [Bacillus cereus VD107]
gi|401251913|gb|EJR58181.1| glycine oxidase ThiO [Bacillus cereus VD107]
Length = 369
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 169/407 (41%), Gaps = 65/407 (15%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWM-VHRTPGS 137
C +DV IIG G+IG ++A L VA+V+K S A+ A G + +
Sbjct: 2 CKKYDVAIIGGGVIGSSVA-HFLAERGYKVAIVEKQRIASEASKAAAGLLGVQAEWDEYD 60
Query: 138 EIWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+++LA S ++ LA+ LR++ G+D IG+++ G I + +E KER+ +
Sbjct: 61 PLFELARESRAIFPQLAEVLREKTGID----IGYEEKGIYRIAQNEDE----KERILHIM 112
Query: 197 E----AGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRH 249
+ G + +L+ L EP E ++G A + P D + A + K H
Sbjct: 113 DWQQKTGEDSYFLTGEHLRTKEPFLSESIIG----AVYYPKDGHVIA----PELTKAFAH 164
Query: 250 FASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLR 309
A+ + V + N+T V + TS+ + +K +V+A G WS +H
Sbjct: 165 SAAFSGADIYEQTEVFDIQIENNT--VTGIVTSEGVITCEK-VVIAGGSWSTKFLHYFHS 221
Query: 310 ETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM 369
D P KG ++ + + L E Y+
Sbjct: 222 ------DWGTYPVKGEVVAVRSRKPLLKAPIFQERFYI---------------------- 253
Query: 370 TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI 429
T G V+G++ FN V+ I I +RA P L++ A++ S
Sbjct: 254 --TPKRGGRYVIGATMNPHTFNKAVQPESITSILERAYMILPALKE---AEWESTWA--- 305
Query: 430 GLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
GLRP G P +G + ++ TGH G+ L+ + + +AD++
Sbjct: 306 GLRPQSNHGAPYMGEHEEIKGLYACTGHYRNGILLSPVSGQYMADLI 352
>gi|423664286|ref|ZP_17639455.1| glycine oxidase ThiO [Bacillus cereus VDM022]
gi|401293581|gb|EJR99220.1| glycine oxidase ThiO [Bacillus cereus VDM022]
Length = 369
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 170/403 (42%), Gaps = 57/403 (14%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE 138
C +DV IIG G+IG ++A L VA+V+K S A+ A G + + +
Sbjct: 2 CKKYDVAIIGGGVIGSSVA-HFLAERGHKVAIVEKQRIASEASKAAAGLLGVQAEWDAYD 60
Query: 139 -IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+++LA S ++ LA LR++ G+D IG+++ G I + +E + +
Sbjct: 61 PLFELARESRAIFPQLAAVLREKTGID----IGYEEKGIYRIAQNEDEKKRILHIMDWQQ 116
Query: 197 EAGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+ G + +L+ L + EP E ++G A + P D Q+ A + K H A+
Sbjct: 117 KTGEDSRFLTGDHLREKEPFLSESIIG----AVYYPKDGQVIA----PELTKAFAHSAAI 168
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
A+ Y +R + +V + TS+ + +K +V+A G WS L+H
Sbjct: 169 SG-ADIYEQTEVFDIRIENN-KVTGIVTSEGVITCEK-VVIAGGSWSTKLLHYFQS---- 221
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
D P KG ++ + + L E Y+ T
Sbjct: 222 --DWGTYPVKGEVVAVRSRKPLLKAPIFQERFYI------------------------TP 255
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
G V+G++ + FN V+ I I +RA P L++ A++ S GLRP
Sbjct: 256 KRGGRYVIGATMKPHTFNKSVQPESITSILERAYTILPALKE---AEWESTWA---GLRP 309
Query: 434 YMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
P +G + ++ TGH G+ L+ + + +AD++
Sbjct: 310 QSNHEAPYMGEHEEIKGLYACTGHYRNGILLSPVSGQYMADLI 352
>gi|386839678|ref|YP_006244736.1| glycine oxidase [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|374099979|gb|AEY88863.1| glycine oxidase [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|451792972|gb|AGF63021.1| glycine oxidase [Streptomyces hygroscopicus subsp. jinggangensis
TL01]
Length = 398
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 183/423 (43%), Gaps = 62/423 (14%)
Query: 76 SSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTP 135
SSR T DV++IG GIIGL A + L+ AVVD A A +
Sbjct: 2 SSR--TSDVLVIGGGIIGLVTAWRA-AQRGLATAVVDPEPGGGAAQVAAGMLAAVTELHY 58
Query: 136 GSE-IWDLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
G E + L L S + + A L + G D +G+++ G+L + ++ L+E
Sbjct: 59 GEETLLALNLESARRYPAFAAELSELTGHD----LGYRRCGTLAVALDADDRAHLRELHA 114
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLD----AMLAVAYIEKGNR 248
+GL +E+LS + + EP L G R + D Q+D A VA E+
Sbjct: 115 LQQRSGLASEWLSGRECRRLEPMLAPG--VRGGLRVDGDHQIDPRRLAAALVAACERAGV 172
Query: 249 HFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLM---H 305
F +AE ++R + G V T+ T +V+AAG SG L
Sbjct: 173 VFHRA--WAERLD-----VVRDRAAG----VTTADGTALRADRVVLAAGSLSGRLAGVPD 221
Query: 306 DLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQIL 365
+LL PV+P KG +L L ++ Y T+ V GQ+
Sbjct: 222 ELL--------PPVRPVKGQVLRL-----------TVPRRYAPFLSRTVR-AVVRGGQVY 261
Query: 366 SISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNR 425
+ G LV+G++ + G++T V + + + A E P + +L L +
Sbjct: 262 LVPREN-----GELVVGATSEELGWDTTVTAGGVYELLRDAHELVPGITELPLTE----- 311
Query: 426 KVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDS 485
R GLRP PD P++GP GL+ + LATGH G+ L T +++A ++T L ++
Sbjct: 312 -TRAGLRPGSPDNAPLLGPS-GLAGLLLATGHYRNGVLLTPVTGDVLAHALVTGELPQEA 369
Query: 486 APF 488
PF
Sbjct: 370 RPF 372
>gi|357591128|ref|ZP_09129794.1| tRNA 5-methylaminomethyl-2-thiouridine biosynthesis protein
[Corynebacterium nuruki S6-4]
Length = 403
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 164/410 (40%), Gaps = 55/410 (13%)
Query: 77 SRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPG 136
S +D +IIG G+ GL IA L + SV V+++ C G TG G + + TP
Sbjct: 2 SSSDNYDWVIIGGGLEGLAIAWGLTSRGEKSVLVLERDQLCGGMTGKSSGVVRAHYGTP- 60
Query: 137 SEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+ + + + + + L D G++ G ++ E + L+ +
Sbjct: 61 -SVAKMGWKGTRFFHRAPEILGDD-------CGFRNCG-YMVAVGEENVTNLEATIAMQQ 111
Query: 197 EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKGR 255
+ G+ +Y+S + P L V + ++ A+ P + DA ML +A+ + A
Sbjct: 112 DLGVDVDYISGDKARELWPGLRVDDFAKIAYEPLAGRGDAPMLGMAFSVVARQQGAKIRT 171
Query: 256 YAEFYHDPVTCLLRS-NSTGE---VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET 311
AE VT R N TG+ V V + + +++A G W+ L
Sbjct: 172 GAE-----VTGFTRDGNGTGDQAAVTGVTLADGSSIGAGHVILATGAWAAQL------GA 220
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTA 371
+ LDIPV+ ++ L+++ + H + + V L P
Sbjct: 221 TVDLDIPVRAQRAQLMLVNPGEPMP--HVPVLSDLVSLQYLCGEPN-------------- 264
Query: 372 TTDVIGNLVLGSSR----QFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKV 427
G+++ G+S +A ++ + D I + +L D+ S
Sbjct: 265 -----GDILCGNSDHAEPHWADPDSYPNKADDDFIEWTIGKLMQRLPDMPNPALTSTYA- 318
Query: 428 RIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
G PD P++GP G+ +FLA G G G +A AE VAD++L
Sbjct: 319 --GCYDTTPDYNPIMGPS-GIDGLFLAVGFSGHGFKIAPAVAEFVADLLL 365
>gi|56963501|ref|YP_175232.1| glycine oxidase [Bacillus clausii KSM-K16]
gi|56909744|dbj|BAD64271.1| glycine oxidase [Bacillus clausii KSM-K16]
Length = 368
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 171/402 (42%), Gaps = 72/402 (17%)
Query: 85 IIIGAGIIGLTIARQLLV-GSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD-- 141
I++G G+IGL++A QL + G +SV ++ C G + P SEI +
Sbjct: 5 IVLGGGVIGLSVAFQLAMDGKTVSVLEINT---CGGQASGAAAGML----APYSEISEDP 57
Query: 142 --------LALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
+LR+ K W+ A ++ G+ + ++GSL +L+ L R
Sbjct: 58 DDFFRLCLASLRAFKEWQ--ASVKQESGM----TFEFTESGSLHCVYHEADLLSLATRKA 111
Query: 194 QLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFAS 252
E G + + L+ +L + EPEL ED A P ++ + A V +++ R+
Sbjct: 112 WQEEFGAKVDVLTREELKKKEPEL--AEDIIGAIHYPEEAHVYAPDYVKALQQACRNRGV 169
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312
Y + H L+++ E+ Q++ ++ +VVA G W+ L E++
Sbjct: 170 H-IYEQLKH---VSLVKTEPHIEL---QSASGQRFTADQLVVATGAWAKEL------ESQ 216
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM-TA 371
+ L++P+ P +G + + PG++ H IL S
Sbjct: 217 LGLNLPIYPIRGQICAY-----------------------NIEPGRIRH--ILYTSQGYL 251
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
G LV G+S AGF TE+ I R+ + P L +L + GL
Sbjct: 252 VPKANGTLVNGASEDIAGFQTEITDKGIRRLTNWNHKIVPFLAEL------TPFHKWAGL 305
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVA 473
RP DG P+IG + +VF+A GH G+ L+ TA++ +
Sbjct: 306 RPATQDGYPLIGFLRNHPRVFMACGHYRNGILLSAITAKVAS 347
>gi|374294286|ref|YP_005041311.1| D-amino acid dehydrogenase [Azospirillum lipoferum 4B]
gi|357428284|emb|CBS91241.1| D-amino acid dehydrogenase [Azospirillum lipoferum 4B]
Length = 433
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 185/453 (40%), Gaps = 86/453 (18%)
Query: 84 VIIIGAGIIGLTIA--------------RQLLVGSDLSVAVVDKVVPCSGATGAGQGYI- 128
VI++G+G+IG+T A RQ + S A +V P A A G +
Sbjct: 3 VIVLGSGVIGVTTAYYLARAGHEVTVIDRQAGPALETSYANAGEVSPGYSAPWAAPGLML 62
Query: 129 ----WMVHR----------TPGSEIWDLALRSN------KLWKMLADSLRDQGLDPLQVI 168
WM+ + P W L L +N +L K + + D L+ +
Sbjct: 63 KAAKWMLMKHSPLVIRPKLDPAMWSWCLKLLANANEASYQLNKSRMVRVAEYSRDCLKAL 122
Query: 169 --------GWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVG 220
+ G+L + RT +++ + L G+ L EP L
Sbjct: 123 RAETGITYDERTQGTLQVFRTQKQMDAAGYDMAVLERYGVPFSLFDRDGLTSVEPALAHV 182
Query: 221 EDS--RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEA 278
+D A LP D D + K + A +G EF + V+ N ++
Sbjct: 183 KDKLVGALHLPGDETGDCF---QFTNKLAAYAAKRG--VEFRYG-VSIRGLENDGRKITG 236
Query: 279 VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLN 338
VQT + TL + + +VA G +S L+ L +D+PV P KG+ L L ++
Sbjct: 237 VQTDQGTL-TADSYIVAMGSYSPKLVKPL------GIDLPVYPVKGYSLTLPITDA---A 286
Query: 339 HASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTI 398
HA P + I++T D I +G + + +GF+ + ++
Sbjct: 287 HA---------------PESTVMDETHKIAVTRLGDRI---RVGGTAELSGFDLSLRESR 328
Query: 399 IDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHE 458
+ ++ +PK DL A+F + GLRP PDG P++GP + ++L TGH
Sbjct: 329 RGPLDHVVSDLFPKGGDLSKAEFWT------GLRPNTPDGTPILGPT-DIRNLYLNTGHG 381
Query: 459 GLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
LG +++ G+A ++AD+V ++D +V+
Sbjct: 382 TLGWTMSAGSARVLADVVSGRRTEIDMEGLSVE 414
>gi|297581186|ref|ZP_06943110.1| D-amino acid dehydrogenase [Vibrio cholerae RC385]
gi|297534502|gb|EFH73339.1| D-amino acid dehydrogenase [Vibrio cholerae RC385]
Length = 420
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 135/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLTAIEKDMQLLAQSGERFELLNVAQCLTHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 193 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ L ++IPV P KG+ L L
Sbjct: 244 LKADAYVVALGSYSTSLLKPL------GIEIPVYPVKGYSLTLPII-------------- 283
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 284 ----DEKFAPQSTVMDETYKVALTRFSDRI---RVAGTAELAGFDPAIPEARKATIEMVA 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 390 GSASILAD-VLTH 401
>gi|350544121|ref|ZP_08913774.1| D-amino acid dehydrogenase small subunit [Candidatus Burkholderia
kirkii UZHbot1]
gi|350528119|emb|CCD36504.1| D-amino acid dehydrogenase small subunit [Candidatus Burkholderia
kirkii UZHbot1]
Length = 430
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 180/441 (40%), Gaps = 93/441 (21%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV-PCSGATGAGQGYI-------WMVHRTP 135
++I+G+G++G+T A L + V V+D+ P + A G I W P
Sbjct: 3 IVILGSGVVGVTSA-YYLARAGHEVTVIDRETGPALETSFANAGQISPGYASPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKMLADSLRDQ--------------GLDPLQV 167
+ W L +R + +W+ML + +D+ D LQ
Sbjct: 62 FKAVKWMFEKHAPLTIRLDGTMNQLQWMWQMLRNCTQDRYTVNKGRMVRLAEYSRDCLQA 121
Query: 168 I--------GWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV 219
+ + G+L + RT ++ + + L +A + E L++ +L +AEP L
Sbjct: 122 LRADTGISYEGRTGGTLQLFRTQQQFDGAGKDIAVLKDANVPFELLTADELKKAEPALAA 181
Query: 220 GED--SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
+ LP D D + + K R Y+ + L +N G +
Sbjct: 182 VSHKLTGGLRLPNDETGDCQMFTTRLAAMAEALGVKFR----YNTSIDALALAN--GRIA 235
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
VQ K L + VVA G +S L+ DL++ IPV P KG+
Sbjct: 236 GVQCGKE-LVQADSYVVALGSYSPKLLGDLVK-------IPVYPLKGY------------ 275
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
S+ A V D P + I++T D+I +G + G++ ++++
Sbjct: 276 ---SITAPIV---DANRAPVSTVLDETYKIAITRFHDLI---RVGGMAEIVGYDKKLKKA 326
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG--PVPGLSKVFLAT 455
+ + + +P D A F + GLRP PDG P++G PVP L FL T
Sbjct: 327 CRETLEMCVNDLFPGGGDTSSATFWT------GLRPMTPDGTPIVGRTPVPNL---FLNT 377
Query: 456 GHEGLGLSLALGTAELVADMV 476
GH LG +++ G+ +L+AD++
Sbjct: 378 GHGTLGWTMSCGSGQLLADLM 398
>gi|422591472|ref|ZP_16666115.1| FAD-binding oxidoreductase [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330878975|gb|EGH13124.1| FAD-binding oxidoreductase [Pseudomonas syringae pv. morsprunorum
str. M302280]
Length = 367
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 36/202 (17%)
Query: 292 IVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHD 351
+++AAG WSG L+ L L +PV+P KG +++ + + +SM
Sbjct: 199 VILAAGAWSGDLLKTL------GLALPVEPVKGQMILYKCASDFL---SSM--------- 240
Query: 352 LTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYP 411
+L+ A G++++GS+ + GF+ ++ + A E P
Sbjct: 241 ------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKTTTHAALESLKASAIELLP 288
Query: 412 KLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAEL 471
+L + A+ I+ GLRP P+G P IGP+ G ++L GH GL LA + +L
Sbjct: 289 ELAN---AEPIAQWA---GLRPGSPEGIPFIGPLAGFDGLWLNCGHYRNGLVLAPASCQL 342
Query: 472 VADMVLTNPLKVDSAPFAVQGR 493
+ D++L P +D AP++ GR
Sbjct: 343 LTDLLLGRPPIIDPAPYSPVGR 364
>gi|383786535|ref|YP_005471104.1| glycine/D-amino acid oxidase, deaminating [Fervidobacterium
pennivorans DSM 9078]
gi|383109382|gb|AFG34985.1| glycine/D-amino acid oxidase, deaminating [Fervidobacterium
pennivorans DSM 9078]
Length = 383
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 164/406 (40%), Gaps = 58/406 (14%)
Query: 77 SRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRT-P 135
S +DV IIG GI G + L S+A+ +K SG+TG G I T P
Sbjct: 2 SEVKKYDVCIIGGGITGTALGYFLCKLGKTSIAIFEKSYLSSGSTGRCAGGIRQQWSTRP 61
Query: 136 GSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQL 195
LA+RS KL++ + D G+D I +KQ G L++ + EE ++ VK
Sbjct: 62 NVR---LAMRSVKLFERFKE---DVGMD----IEYKQGGYLVLSYSEEEAEQFEKNVKMQ 111
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGR 255
E GL E L+ + + P + A F D + AV + R
Sbjct: 112 REEGLNVEILTPKQVSERYPYINTEGLVMATFCQTDGHANPHKAVIGYAQAIRRMDGH-- 169
Query: 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV- 314
+ H V + +N G+V + T+ ++ +V A+G WS + +++V
Sbjct: 170 --IYTHTEVKNIDVAN--GKVIGIDTTAG-YFACDVVVNASGPWSNEV-------SKLVG 217
Query: 315 LDIPVKPRKGHLLV---LENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTA 371
+D+ + + +LV LENF + M + G+ + Q HGQ +
Sbjct: 218 VDLLTESYRHQILVTEPLENFFPM------MAISFSGN----FYMRQTLHGQFI------ 261
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
+ G + G N V + + +P L+++ + S G+
Sbjct: 262 -------MGQGDKDEKPGLNFNVTYKFEKELANKMVRIFPFLKNVRIIRHWS------GM 308
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
PD +P+IG + + A G+ G G +A E +A++++
Sbjct: 309 YNMSPDAQPIIGASEKVKGYYYAVGYSGHGFMVAPAVGEALAELIV 354
>gi|297537432|ref|YP_003673201.1| FAD dependent oxidoreductase [Methylotenera versatilis 301]
gi|297256779|gb|ADI28624.1| FAD dependent oxidoreductase [Methylotenera versatilis 301]
Length = 359
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 112/268 (41%), Gaps = 50/268 (18%)
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
A +LP SQ+ Y + R + K + H T L+ T ++ QT
Sbjct: 136 EALWLPTVSQIRP----PYFMQAMRKWLEKNKVTMLEH---TELVPLKETQKLNEWQTIN 188
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
S VV +G WS +LL+ET L+I KP +G +L
Sbjct: 189 GKTISADQFVVTSGAWS----FELLKETSAKLNI--KPMRGQIL---------------- 226
Query: 344 AGYVGHHDLTLHPGQVNHGQIL---SISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIID 400
L+ + N QI+ M D G+L+ GS+ + GF+T V Q + +
Sbjct: 227 ----------LYKPEKNLEQIVYREGFYMIPRRD--GHLLAGSTLEDVGFDTTVTQEVRN 274
Query: 401 RIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGL 460
I +A P L++ + S GLRP P+ P I P + ++L TGH
Sbjct: 275 EISAKAEAIMPALKNQAILKHWS------GLRPGTPENLPTISAHPTIENLYLNTGHFRY 328
Query: 461 GLSLALGTAELVADMVLTNPLKVDSAPF 488
GL++A +A+LV ++L +D+ P+
Sbjct: 329 GLTMAPASAKLVTALMLGEKPLIDAEPY 356
>gi|424918176|ref|ZP_18341540.1| glycine/D-amino acid oxidase, deaminating [Rhizobium leguminosarum
bv. trifolii WSM597]
gi|392854352|gb|EJB06873.1| glycine/D-amino acid oxidase, deaminating [Rhizobium leguminosarum
bv. trifolii WSM597]
Length = 416
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 173/459 (37%), Gaps = 103/459 (22%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IW- 140
V+++GAGIIG+ IA +L +V +VD+ P GA+ I + P S IW
Sbjct: 8 VVVVGAGIIGVVIAHELQRRGQ-TVVLVDRATPGMGASYGNMASIAVTEFMPASRPGIWA 66
Query: 141 -----------DLALRSNKLWKMLADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEELVML 188
+ +R L K++ LR P ++ + G++L GR E+L L
Sbjct: 67 QMPKWLLDPEGPVRIRPGYLPKLVPWFLRFLAASLPSKLRELEAAGAVLCGRVYEDLDAL 126
Query: 189 ----------------------------KERVKQLCEAGLRAEYLSSSDLLQAEPELM-- 218
+ + L G R E L + + EP L
Sbjct: 127 LKGTGLMQMLTAEGCLSLYTDEAEFRADRAHIDILERFGFRHEILGGNAIRDLEPALTTR 186
Query: 219 VGE-----DSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST 273
+G+ D+R+ PY +L A L + G R +G F
Sbjct: 187 IGKAVLFPDNRSVTDPY--KLVAALTEKFQALGGR--IVEGDVVGF----------EQGE 232
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
V A++ + + +V+AAG ++ L LLRE IP++ +G+
Sbjct: 233 AGVSALRLADGRTLAADKVVLAAGAFTARL-SALLRE-----HIPLETERGY-------- 278
Query: 334 SLKLNHASMEAGYVGHHDLTLHPG-QVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNT 392
H + PG + H I T G + +G + + AG +
Sbjct: 279 ----------------HTQIMEPGISMRHSIIWPARAFMVTPTAGGIRVGGTVEMAGLDA 322
Query: 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVF 452
+ + KRA E P L ++ +G RP +PD PV+GP V+
Sbjct: 323 PPDYRRAKILVKRAREALPDLVPRSATEW-------MGHRPALPDTVPVMGPSAKRRNVW 375
Query: 453 LATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
ATGH LGL+ A T L+AD++ VD P+ V
Sbjct: 376 YATGHGHLGLTYAATTGRLMADLITGVEPPVDMKPYRVD 414
>gi|390575448|ref|ZP_10255546.1| D-amino acid dehydrogenase small subunit [Burkholderia terrae
BS001]
gi|389932617|gb|EIM94647.1| D-amino acid dehydrogenase small subunit [Burkholderia terrae
BS001]
Length = 416
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 133/323 (41%), Gaps = 44/323 (13%)
Query: 170 WKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFL- 228
+ + G L++ R P E + +++ L AG L S + EP L + A +
Sbjct: 132 YVRNGKLVVYRDPHEFERARRKMELLVAAGSNQRALDGSACVALEPALAHAQPLIAGGIH 191
Query: 229 -PYDSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTL 286
P + D VA + R + R Y PV L+ + G + A +T+ +
Sbjct: 192 TPSEEAGDCHRFGVALADALQR----RHRVTIRYETPVRELV--SEGGRIVAARTAAGDI 245
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G S L+ L + +PV P G+ L + N N L S+
Sbjct: 246 -EADAFVVALGLGSVPLLDAL------GVRLPVYPLTGYSLTIHNANPLHTPRVSVT--- 295
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
DL H +I+ + G L + + AG + +D + ++A
Sbjct: 296 ----DL--------HRKIVYAPLG------GRLRIAGMVEIAGLSDAQRAGRVDLLKRQA 337
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
E +P D +N + G RP PD KP+IG P S ++L TGH LG +LA
Sbjct: 338 QEIFPAAGDY------ANAQTWCGHRPATPDSKPLIGRTP-YSNLWLNTGHGALGFTLAC 390
Query: 467 GTAELVADMVLTNPLKVDSAPFA 489
G+A ++AD++ VD +A
Sbjct: 391 GSARVIADVIAGRAPSVDIDAYA 413
>gi|339018020|ref|ZP_08644164.1| D-amino acid dehydrogenase small subunit [Acetobacter tropicalis
NBRC 101654]
gi|338752909|dbj|GAA07468.1| D-amino acid dehydrogenase small subunit [Acetobacter tropicalis
NBRC 101654]
Length = 418
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 183/444 (41%), Gaps = 97/444 (21%)
Query: 84 VIIIGAGIIGLTIA--------------RQLLVGSDLSVAVVDKVVPCSGATGAG----- 124
+I++GAG+IG T A RQ G + S A +V P AG
Sbjct: 3 IIVLGAGVIGTTSAWYLSKLGHEVTVVDRQPAPGLETSFANAGQVSPGYSTPWAGPSLPL 62
Query: 125 QGYIWMVHRTPGSEI----WDLA------------------------LRSNKLWKMLADS 156
Q WM+ R + +DLA LR + + D+
Sbjct: 63 QAMKWMLQRHHSPLVIRKRFDLAMFRWIEQLLKNCNAHAYDINKSRMLRVAEYSRDCLDA 122
Query: 157 LRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP 215
LR++ GL +Q G + + RT +++ ++ ++ L E+ + L+ +L+ EP
Sbjct: 123 LREETGL----TYDDRQRGLIQLFRTNKQVDKIQRDMRLLSESAIPHTLLTVDQILEHEP 178
Query: 216 ELMVGEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST 273
L A +LP D DA + + K ++ + F ++ T +
Sbjct: 179 GLAHARHLLKAGLYLPGDESGDAHVFTQRLAK-----MAEAQGVTFLYN-TTIKGMDAAA 232
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
E+ +V+TS L + A VV+ G +S L+ L + +PV P KG+ L L +
Sbjct: 233 DEIMSVRTSAGHLRAD-AYVVSMGSYSPLLLKPL------GIHLPVYPVKGYSLTLPLTD 285
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV-LGSSRQFAGFNT 392
+HA P + + +++T +GN + +G + + G+N
Sbjct: 286 E---SHA---------------PSSTVNDETYKVAITR----LGNRIRVGGTAELTGYNL 323
Query: 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVF 452
+ + + +E + DL A + + GLRP PDG PVIGPV ++
Sbjct: 324 RLSPDRRETLELSFSELFGG-GDLSAATYWT------GLRPNTPDGTPVIGPVSAFRNLW 376
Query: 453 LATGHEGLGLSLALGTAELVADMV 476
L TGH LG ++A G+ L+AD++
Sbjct: 377 LNTGHGTLGWTMACGSGRLIADLI 400
>gi|430002106|emb|CCF17886.1| putative sarcosine/opine oxidase subunit B-like dehydrogenase;
FAD-dependent dehydrogenase [Rhizobium sp.]
Length = 391
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 174/409 (42%), Gaps = 44/409 (10%)
Query: 85 IIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLAL 144
I++G+GIIG A L +SV ++D P + ATGA G + + + PG + AL
Sbjct: 10 IVVGSGIIGAASA-YFLARRGVSVRLLDASAPAAEATGAADGAVSVASKRPG-PMMSAAL 67
Query: 145 RSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEY 204
+L+ LAD + L +K+ + +I + EE +L L AG++ E
Sbjct: 68 EGVRLYGQLAD-------EGLLAGAFKRRSTFIIAASDEECTVLASHSAALESAGVKVET 120
Query: 205 LSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPV 264
LS L Q P L S A + + + A+ Y + +R + G + V
Sbjct: 121 LSGDRLCQTFPVL-----SNQARMAVEVHGEGH-AIGY-QIVHRLLTASGITVD-RDTRV 172
Query: 265 TCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKG 324
L R S V + T++ L + VVAAG S +L+ L + PRKG
Sbjct: 173 EGLRRDRSGQRVTGIDTNRGRLAADVV-VVAAGNGSATLLG---------LSQVLTPRKG 222
Query: 325 HLLVLENFNSLK--LNHASMEAGYV---GHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
LLV E +L + A M Y+ G + P G ++ +T G
Sbjct: 223 QLLVTERAPTLNAAMPGAIMSGRYLLSKGSQKVGYTPPPRGMGLVIDPLVT------GQF 276
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++G +R+ G + + RI A E P L + L + G+R + DG
Sbjct: 277 LIGGTREDFGDRRTNDIEAVSRILCDAVELVPGLASVRLLRSFA------GVRTAVIDGL 330
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++G VPGL F+ATG EG G+ L T + + ++ +D + F
Sbjct: 331 PLVGRVPGLENAFVATGFEGDGICLGPITGQSIVQLICGEKPSIDLSFF 379
>gi|424861083|ref|ZP_18285029.1| sarcosine oxidase beta subunit [Rhodococcus opacus PD630]
gi|356659555|gb|EHI39919.1| sarcosine oxidase beta subunit [Rhodococcus opacus PD630]
Length = 402
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 167/416 (40%), Gaps = 66/416 (15%)
Query: 76 SSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTP 135
S+ T +I+G G+ GL IA L + V V+++ CSG TG G + + TP
Sbjct: 4 SNVTQTAKFVIVGGGLEGLAIAWSLADRGETDVLVLERGTLCSGMTGKSSGVVRCHYGTP 63
Query: 136 --GSEIW---DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKE 190
+ W D+ R+ +++ G D + ++Q G ++G + LK
Sbjct: 64 SLAAMSWYGVDIFTRATEIF----------GDD----MAFRQCG-YVVGVGENNIDPLKA 108
Query: 191 RVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHF 250
V + G+ +Y+ + + P L + + + A+ P + +A +A R
Sbjct: 109 NVAMMQGLGIDVDYIGHDKMAELWPGLHLDDFAAFAYEPLGGRGEAYMAGMAFGASARRL 168
Query: 251 ASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRE 310
R + PVT LL+S + G V V + + +++A G W+ L
Sbjct: 169 GVTIRQST----PVTSLLQS-ADGRVYGVTLANGDEVHAEHVILATGPWAPEL------G 217
Query: 311 TEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMT 370
+ +DIPVK ++ L++++ + + + G + P
Sbjct: 218 AGVGVDIPVKAQRAQLVLID--QGVPTPEVPVLSDLAGLQYICREPN------------- 262
Query: 371 ATTDVIGNLVLGSSRQFA-------GFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFIS 423
G L++G+S A ++ + + I++ + P + D +
Sbjct: 263 ------GELLVGNSDHAAPEYIDPDKYSNRADDSTIEKNIMKLGNRLPDMPDPRIT---- 312
Query: 424 NRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN 479
+G PD P+IGP P + +FLATG G G ++ LVADM+L +
Sbjct: 313 --SSYVGAYDVTPDYNPIIGPAP-VDGLFLATGFSGHGFKISPAVGRLVADMLLDD 365
>gi|383455977|ref|YP_005369966.1| sarcosine oxidase subunit beta [Corallococcus coralloides DSM 2259]
gi|380734366|gb|AFE10368.1| sarcosine oxidase subunit beta family protein [Corallococcus
coralloides DSM 2259]
Length = 496
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 166/390 (42%), Gaps = 48/390 (12%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLA 143
V+IIG GI+GL++A L + + V V+++ C+GA+G G + M TP + +LA
Sbjct: 122 VVIIGGGIMGLSLAYNLALRGETDVVVLERGYLCAGASGRNGGGVRMQWGTPA--LIELA 179
Query: 144 LRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAE 203
RS L K A R+ G++ + +Q G L + + + L + G+
Sbjct: 180 KRSIDLMKGFA---RELGVN----VWLRQGGYLFLAKRKDTAYRLDRNAALHNKYGVPTR 232
Query: 204 YLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDP 263
+++ + Q P+L + + AA+ P D + A++ + +G E Y +
Sbjct: 233 IITADEARQIVPDLTMKDCVTAAYNPEDG---VIFPWAFLWGYAQGCVKRGVKVETYTN- 288
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
VT SN G+V V+T + + + +V+A+G WS ++ L + + +P +P +
Sbjct: 289 VTGFETSN--GQVRKVKTDRGDI-ACDTVVLASGAWSPAVAK--LADVK----LPNEPHR 339
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
+L E S+ ++ G S SM +++G +G
Sbjct: 340 HEILSTEPLKPFLSPLVSV----------------LDTGLYFSQSMRG--EIVGG--MGD 379
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
++ AG N + R + E P + + + GL PD P++G
Sbjct: 380 PKEPAGPNMGSTLRFVARFAQALTEQLPHVNQ------VKVLRQWGGLYDVTPDNNPILG 433
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVA 473
PGL + +G G G +A AE +A
Sbjct: 434 RTPGLDNLLQLSGFVGHGFMMAPAVAERMA 463
>gi|289625188|ref|ZP_06458142.1| glycine oxidase ThiO [Pseudomonas syringae pv. aesculi str. NCPPB
3681]
gi|289651372|ref|ZP_06482715.1| glycine oxidase ThiO [Pseudomonas syringae pv. aesculi str. 2250]
gi|422584367|ref|ZP_16659477.1| glycine oxidase ThiO [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330869184|gb|EGH03893.1| glycine oxidase ThiO [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 370
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 36/202 (17%)
Query: 292 IVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHD 351
+++AAG WSG L+ L L++PV+P KG +++ + + +SM
Sbjct: 199 VILAAGAWSGELLKTL------SLELPVEPVKGQMILYKCASDFL---SSM--------- 240
Query: 352 LTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYP 411
+L+ A G++++GS+ + GF+ ++ + A E P
Sbjct: 241 ------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKTTTHAALESLKASAIELLP 288
Query: 412 KLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAEL 471
+L + A+ ++ GLRP P+G P IGP+ G ++L GH GL LA + +L
Sbjct: 289 ELAN---AEPVAQWA---GLRPGSPEGIPFIGPLAGFDGLWLNCGHYRNGLVLAPASCQL 342
Query: 472 VADMVLTNPLKVDSAPFAVQGR 493
+ D++L +D AP+ GR
Sbjct: 343 ITDLLLNREPIIDPAPYTPSGR 364
>gi|240137181|ref|YP_002961650.1| glycine oxidase [Methylobacterium extorquens AM1]
gi|240007147|gb|ACS38373.1| glycine oxidase [Methylobacterium extorquens AM1]
Length = 411
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 175/407 (42%), Gaps = 56/407 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIW-MVHRTPGSEIWD 141
DV ++GAG+IGL+IA QL + SVAVV++ SGA+ A G + PGS++
Sbjct: 29 DVAVVGAGLIGLSIAWQL-AQAGRSVAVVERGNVGSGASLAATGMLAPAAEHEPGSDLLL 87
Query: 142 LALRSN-KLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
+ + W D+L+ + I ++ G+L+I +E+ L+ R +G+
Sbjct: 88 PLALESLRRWPAFRDALQAASG---REIDYRTDGTLVIAIGRDEVERLRFRHDLQRRSGV 144
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFA---SKGRYA 257
AE+LS ++ EP L+ + P D+Q+D L + + + S+G
Sbjct: 145 AAEWLSGPEVRAREP-LLRPNVTAGILCPLDAQVDPRLVMEALLRACEAAGVVISEGVAV 203
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG--SLMHDLLRETEIVL 315
E G V + + TL + +++AAG WSG SL+ L + L
Sbjct: 204 EGLE---------RRGGRVTGLHAAGRTLAADT-VILAAGAWSGDASLLPSDLDVPD--L 251
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+PV+P KG L L + G + T ++ M D
Sbjct: 252 SVPVRPLKGQSLALRT---------TKRTGTLSRMVWT-----------DAVHMAPKGD- 290
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G+L++G++ + GF + V + + + A P + ++ + S G RP
Sbjct: 291 -GHLIVGATVEDCGFTSGVTAGGMFALLEGARRVLPGIEEMEIDAVWS------GFRPTS 343
Query: 436 PDGKPVI-GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPL 481
D P+I PGL LATGH G LA TA+ VA ++ L
Sbjct: 344 DDDAPIIEEAAPGL---VLATGHHRNGYLLAPATADAVATLLTEGAL 387
>gi|154246246|ref|YP_001417204.1| D-amino-acid dehydrogenase [Xanthobacter autotrophicus Py2]
gi|226722401|sp|A7IHQ4.1|DADA_XANP2 RecName: Full=D-amino acid dehydrogenase small subunit
gi|154160331|gb|ABS67547.1| D-amino-acid dehydrogenase [Xanthobacter autotrophicus Py2]
Length = 421
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 175/455 (38%), Gaps = 91/455 (20%)
Query: 84 VIIIGAGIIGLTIA--------------RQLLVGSDLSVAVVDKVVPCSGATGAGQG--- 126
++I+G+G++G A RQ G + S A +V P A AG G
Sbjct: 3 ILILGSGVVGTASAYYLAKAGHEVTVLDRQRAAGMETSFANAGQVSPGYSAPWAGPGIPV 62
Query: 127 ----YIWMVHR--------TPGSEIW---------DLALRSNKLWKM-LADSLRDQGLDP 164
++ M HR P +W + A R NK + LA+ RD LD
Sbjct: 63 KAIKWLLMHHRPLVVWPSLDPKLYLWLAKMLANCTEEAYRRNKARMVALAEYSRD-ALDA 121
Query: 165 LQ-----VIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV 219
L+ + G+L + RT ++L + + L +R E L S ++AEP L
Sbjct: 122 LRSETGIAYDERMLGTLQLFRTRKQLDHVHSDTEVLDAHNVRYELLDPSGCIRAEPALAR 181
Query: 220 GEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASK-GRYAEFYHDPVTCLLRSNSTGEV 276
D LP D DA + R+ A R + VT + G +
Sbjct: 182 VRDKFVGGLRLPGDETGDAHIF-------TRNLADICARQGVTFRYGVTVEGLRHEAGRI 234
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
V + + + V A G ++ +L+ L + +PV P KG+ L L +
Sbjct: 235 TGVALAGGEIATADIYVAAMGSYTPALLAPL------GIRLPVYPVKGYSLTLPITD--- 285
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV-LGSSRQFAGFNTEVE 395
P ++ + +G + +G + + AGF+ +
Sbjct: 286 -------------------PDAAPRSTVMDETYKVAITRLGERIRVGGTAELAGFDLSLR 326
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+ + + +P D+ A F + GLRP PDG P+IGP L +F T
Sbjct: 327 EPRRATLAHSVGDLFPAGGDISKATFWT------GLRPMTPDGTPIIGPTK-LDNLFTNT 379
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
GH LG ++A G+ ++AD++ +D+A +V
Sbjct: 380 GHGTLGWTMACGSGRVLADLIGGRAPDIDTADLSV 414
>gi|423556368|ref|ZP_17532671.1| glycine oxidase ThiO [Bacillus cereus MC67]
gi|401195557|gb|EJR02513.1| glycine oxidase ThiO [Bacillus cereus MC67]
Length = 369
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 172/409 (42%), Gaps = 69/409 (16%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWM-VHRTPGS 137
C +DV IIG G+IG ++A L VA+++K S A+ A G + +
Sbjct: 2 CKKYDVAIIGGGVIGSSVA-HFLAERGHKVAIIEKQRIASEASKAAAGLLGVQAEWDEYD 60
Query: 138 EIWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+++LA S ++ LA+ LR++ G+D IG+++ G I + +E KER+ +
Sbjct: 61 PLFELARESRAIFPQLAEVLREKTGID----IGYEEKGIYRIAQNEDE----KERILHIM 112
Query: 197 E----AGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRH 249
+ G + +L+ L + EP E ++G A + P D + A + +
Sbjct: 113 DWQQKTGEDSYFLTGDHLREKEPFLSESIIG----AVYYPKDGHVIA-------PELTKA 161
Query: 250 FASKGRY--AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDL 307
FA + A+ Y +R + +V + TS+ + +K +V+A G WS L+H
Sbjct: 162 FAHSAAFSGADIYEQTEVFDIRIENN-KVTGIVTSEGVITCEK-VVIAGGAWSTKLLHYF 219
Query: 308 LRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSI 367
D P KG ++ + + L E Y+
Sbjct: 220 HS------DWGTYPVKGEVVAVRSRKPLLKAPIFQERFYI-------------------- 253
Query: 368 SMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKV 427
T G V+G++ + FN V+ I I +RA P L++ A++ S
Sbjct: 254 ----TPKRGGRYVIGATMKPHTFNKSVQPESITSILERAYTILPALKE---AEWESTWA- 305
Query: 428 RIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
GLRP P +G + ++ TGH G+ L+ + + +AD++
Sbjct: 306 --GLRPQSNHEAPYMGEHEEIKGLYACTGHYRNGILLSPVSGQYMADLI 352
>gi|111019812|ref|YP_702784.1| sarcosine oxidase subunit beta [Rhodococcus jostii RHA1]
gi|110819342|gb|ABG94626.1| possible sarcosine oxidase beta subunit [Rhodococcus jostii RHA1]
Length = 397
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 165/412 (40%), Gaps = 66/412 (16%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTP--GS 137
T +I+G G+ GL IA L + V V+++ CSG TG G + + TP +
Sbjct: 3 QTVKFVIVGGGLEGLAIAWSLADRGETDVLVLERDTLCSGMTGKSSGVVRCHYGTPSLAA 62
Query: 138 EIW---DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQ 194
W D+ R+ +++ G D + ++Q G ++G + LK V
Sbjct: 63 MSWYGVDIFTRATEIF----------GDD----MAFRQCG-YVVGVGENNIDPLKANVAM 107
Query: 195 LCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKG 254
+ G+ +Y+ + + P L + + + A+ P + +A +A R +
Sbjct: 108 MQGLGIDVDYIGHDTMAELWPGLHLDDFAAFAYEPLGGRGEAYMAGMAFGASARKLGVRI 167
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
R + PV LL+ N+ G V V + + +++A G W+ L +
Sbjct: 168 RQST----PVASLLQ-NADGRVYGVTLANGDEVHAEQVILATGPWAPEL------GAGVG 216
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
+DIPVK ++ L++++ + + + G + P
Sbjct: 217 VDIPVKAQRAQLVLID--QGVPTPEVPVLSDLAGLQYICREPN----------------- 257
Query: 375 VIGNLVLGSSRQFA-------GFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKV 427
G L++G+S A ++ + + I++ + P + D +
Sbjct: 258 --GELLVGNSDHAAPEYIDPDKYSNRADDSTIEKNIGKLGNRLPDMPDPRIT------SS 309
Query: 428 RIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN 479
+G PD P+IGP P + +FLATG G G ++ LVADM+L +
Sbjct: 310 YVGAYDVTPDYNPIIGPAP-VDGLFLATGFSGHGFKISPAVGRLVADMLLDD 360
>gi|163938652|ref|YP_001643536.1| glycine oxidase ThiO [Bacillus weihenstephanensis KBAB4]
gi|423515507|ref|ZP_17491988.1| glycine oxidase ThiO [Bacillus cereus HuA2-4]
gi|163860849|gb|ABY41908.1| glycine oxidase ThiO [Bacillus weihenstephanensis KBAB4]
gi|401166895|gb|EJQ74193.1| glycine oxidase ThiO [Bacillus cereus HuA2-4]
Length = 369
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 170/403 (42%), Gaps = 57/403 (14%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE 138
C +DV IIG G+IG ++A L VA+V+K S A+ A G + + +
Sbjct: 2 CKKYDVAIIGGGVIGSSVA-HFLAERGHKVAIVEKQRIASEASKAAAGLLGVQAEWDAYD 60
Query: 139 -IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+++LA S ++ LA LR++ G+D IG+++ G I + +E + +
Sbjct: 61 PLFELARESRAIFPQLAAVLREKTGID----IGYEEKGIYRIAQNEDEKKRILHIMDWQQ 116
Query: 197 EAGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+ G + +L+ L + EP E ++G A + P D Q+ A + K H A+
Sbjct: 117 KTGEDSRFLTGDHLREKEPFLSESIIG----AVYYPKDGQVIA----PELTKAFAHSAAI 168
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
A+ Y +R + +V + TS+ + +K +V+A G WS L+H
Sbjct: 169 SG-ADIYEQTEVFDIRIENN-KVTGIVTSEGVITCEK-VVIAGGSWSTKLLHYFHS---- 221
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
D P KG ++ + + L E Y+ T
Sbjct: 222 --DWGTYPVKGEVVAVRSKKPLLKAPIFQERFYI------------------------TP 255
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
G V+G++ + FN V+ I I +RA P L++ A++ S GLRP
Sbjct: 256 KRGGRYVIGATMKPHTFNKSVQPESITSILERAYTILPALKE---AEWESTWA---GLRP 309
Query: 434 YMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
P +G + ++ TGH G+ L+ + + +AD++
Sbjct: 310 QSNHEAPYMGEHEEIKGLYACTGHYRNGILLSPVSGQYMADLI 352
>gi|400286604|ref|ZP_10788636.1| FAD dependent oxidoreductase [Psychrobacter sp. PAMC 21119]
gi|400287593|ref|ZP_10789625.1| FAD dependent oxidoreductase [Psychrobacter sp. PAMC 21119]
gi|400288081|ref|ZP_10790113.1| FAD dependent oxidoreductase [Psychrobacter sp. PAMC 21119]
Length = 415
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKG---HLLVLE 330
GE V T +T YS K +V+AAG WS L+ L ++P+ P +G H V E
Sbjct: 230 GEGWKVITDNDTYYSDK-LVIAAGPWSNDLIKPL------GYNLPLFPMRGYHQHFKVTE 282
Query: 331 NFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGF 390
N++ + M+ G+V G + G ++ TT + + + F
Sbjct: 283 K-NTINHSMFDMDKGFVM--------GPMQQGIRITTGAEMTT-------MDAPKNFGQL 326
Query: 391 NTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSK 450
T + K A + P L D + + + G RP MPD KPVIGP K
Sbjct: 327 KT---------VLKLARKILP------LEDAVES-EAWAGSRPCMPDMKPVIGPADKHDK 370
Query: 451 VFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
++ A GH G +L T LV +M+ PL VD APF+ Q
Sbjct: 371 LWFAFGHSHQGFTLGPMTGRLVEEMIHDKPLLVDVAPFSAQ 411
>gi|423455729|ref|ZP_17432582.1| glycine oxidase ThiO [Bacillus cereus BAG5X1-1]
gi|423474427|ref|ZP_17451166.1| glycine oxidase ThiO [Bacillus cereus BAG6O-2]
gi|401134366|gb|EJQ41983.1| glycine oxidase ThiO [Bacillus cereus BAG5X1-1]
gi|402423191|gb|EJV55410.1| glycine oxidase ThiO [Bacillus cereus BAG6O-2]
Length = 369
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 172/409 (42%), Gaps = 69/409 (16%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWM-VHRTPGS 137
C +DV IIG G+IG ++A L VA+++K S A+ A G + +
Sbjct: 2 CKKYDVAIIGGGVIGSSVA-HFLAERGHKVAIIEKQRIASEASKAAAGLLGVQAEWDEYD 60
Query: 138 EIWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+++LA S ++ LA+ LR++ G+D IG+++ G I + +E KER+ +
Sbjct: 61 PLFELARESRAIFPQLAEVLREKTGID----IGYEEKGIYRIAQNEDE----KERILHIM 112
Query: 197 E----AGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRH 249
+ G + +L+ L + EP E ++G A + P D + A + +
Sbjct: 113 DWQQKTGEDSYFLTGDHLREKEPFLSESIIG----AVYYPKDGHVIA-------PELTKA 161
Query: 250 FASKGRY--AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDL 307
FA + A+ Y +R + +V + TS+ + +K +V+A G WS L+H
Sbjct: 162 FAHSAAFSGADIYEQTEVFDIRIENN-KVTGIVTSEGVITCEK-VVIAGGSWSTKLLHYF 219
Query: 308 LRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSI 367
D P KG ++ + + L E Y+
Sbjct: 220 HS------DWGTYPVKGEVVAVRSRKPLLKAPIFQERFYI-------------------- 253
Query: 368 SMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKV 427
T G V+G++ + FN V+ I I +RA P L++ A++ S
Sbjct: 254 ----TPKRGGRYVIGATMKPHTFNKSVQPESITSILERAYTILPALKE---AEWESTWA- 305
Query: 428 RIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
GLRP P +G + ++ TGH G+ L+ + + +AD++
Sbjct: 306 --GLRPQSNHEAPYMGEHEEIKGLYACTGHYRNGILLSPVSGQYMADLI 352
>gi|288555816|ref|YP_003427751.1| glycine oxidase [Bacillus pseudofirmus OF4]
gi|288546976|gb|ADC50859.1| glycine oxidase [Bacillus pseudofirmus OF4]
Length = 370
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 169/434 (38%), Gaps = 96/434 (22%)
Query: 81 TFDVIIIGAGIIGLTIARQL-LVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEI 139
T VI++G G+IGL A +L G D V V++KV C G + + G +
Sbjct: 2 THRVIVLGGGVIGLASALELSRKGHD--VTVLEKVR-CGGQASGAAAGMLAPYSEIGEDP 58
Query: 140 WDL------ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVK 193
D +LR +W+ + + + +GSL +L+ LK R
Sbjct: 59 DDFFRLCLASLREYPVWQEEVKKISGHDFE------YTNSGSLHAVYHEADLLALKTRQS 112
Query: 194 QLCEAGLRAEYLSSSDLLQAEPEL---MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHF 250
E G AE + ++ + + EP L ++G A P +S + A V +E+ R
Sbjct: 113 WQREWGAEAELVDATRIKKLEPHLSDSIIG----AMHYPEESHVFAPDYVRALEEACRK- 167
Query: 251 ASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT----------SKN-TLYSKKAIVVAAGCW 299
+ VT E+EAV+ SKN + + +V+A+G W
Sbjct: 168 -----------NGVTI------AEELEAVEVHSWKEDIDLVSKNGQRFQAERLVIASGAW 210
Query: 300 SGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQV 359
S L E L++PV P +G + E L QV
Sbjct: 211 SKEL------EETFSLNLPVYPIRGQICAYE-----------------------LGDKQV 241
Query: 360 NHGQILSISMTATTDVI----GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRD 415
NH I T+ ++ G LV G+S AGF T+V + I R+ +P L D
Sbjct: 242 NH-----IVYTSQGYLVPKANGTLVNGASEDIAGFMTDVTVSGIARLTNWNKNIFPFLTD 296
Query: 416 LCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADM 475
L GLRP DG P IG P + ATGH G+ L+ TA++VA +
Sbjct: 297 L------KPFHTWAGLRPATQDGYPFIGKHPNAKHIIFATGHYRNGILLSPITAKIVAAL 350
Query: 476 VLTNPLKVDSAPFA 489
+ V FA
Sbjct: 351 LSDEKTPVPIETFA 364
>gi|340789405|ref|YP_004754870.1| D-amino acid dehydrogenase small subunit [Collimonas fungivorans
Ter331]
gi|340554672|gb|AEK64047.1| D-amino acid dehydrogenase small subunit [Collimonas fungivorans
Ter331]
Length = 428
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 177/443 (39%), Gaps = 97/443 (21%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV-PCSGATGAGQGYI-------------- 128
V+I+G+G++G+T A L + V V+D++ P + A G I
Sbjct: 3 VLILGSGVVGVTSA-YYLARAGHEVTVIDRLPGPAQDTSFANAGQISPGYASPWAAPGIP 61
Query: 129 -----WMVHR------TPGSEIWDLALRSNKLWKMLADS--------------LRDQGLD 163
WM+ TP ++ L +W+ML + L + D
Sbjct: 62 LKALKWMLQEHAPLSITPDGTLFQL----RWMWQMLRNCSAARYAVNKERMVRLAEYSRD 117
Query: 164 PLQVI--------GWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP 215
+V+ +Q G++ + R+ ++L + ++ L + G+ E L+ L AEP
Sbjct: 118 CFKVLRADTGIAYEGRQLGTMQVFRSQQQLDDAAKDIQVLQDTGVPFELLTPDQLALAEP 177
Query: 216 EL--MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST 273
L + + S A LP D D + + K + RY D +T +
Sbjct: 178 ALDAVKHKLSGALRLPNDETGDCQMFTTRLAKMAEELGVRFRY-NLQIDALTL-----AN 231
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
GE+ VQ L + + VVA G +S + L+ DIPV P KG+
Sbjct: 232 GEIAGVQCGPEHLQADR-YVVALGAYSTGFLGSLV-------DIPVYPLKGY-------- 275
Query: 334 SLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393
S+ + EA P + I++T D I +G + GFN
Sbjct: 276 SITVPIVDAEAA----------PVSTVLDETYKIAITRFDDRI---RVGGMAEIVGFNKT 322
Query: 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFL 453
++ + + +P + A F + GLRP PDG P++G + +FL
Sbjct: 323 LKPKRRATLEMVVNDLFPGAGNTAAASFWT------GLRPMTPDGTPIVGAT-HIRNLFL 375
Query: 454 ATGHEGLGLSLALGTAELVADMV 476
TGH LG +++ G+A+L+AD++
Sbjct: 376 NTGHGTLGWTMSCGSAQLLADLI 398
>gi|443294136|ref|ZP_21033230.1| Glycine oxidase thiO [Micromonospora lupini str. Lupac 08]
gi|385882650|emb|CCH21381.1| Glycine oxidase thiO [Micromonospora lupini str. Lupac 08]
Length = 431
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 152/391 (38%), Gaps = 67/391 (17%)
Query: 92 IGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IWDLALRSNKL 149
IGL IA + L VAV D P SGA+ G + V E + +L + S
Sbjct: 19 IGLAIAWRCAT-RGLRVAVHDPA-PGSGASAVAAGMLSPVAEAYFGERRLTELLVASAAR 76
Query: 150 WKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSS 208
W A L + G++ IG++ G+L++G T ++L + GL L S
Sbjct: 77 WPGFAAELTEASGVE----IGYRTEGTLMVGLTGDDLAEARRLWAYQQGLGLPVTPLRPS 132
Query: 209 DLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLL 268
+L EP L A P D Q+D L V + A++ A F PV L
Sbjct: 133 ELRDREPALAP-RVRGGALAPTDHQVDPRLLVPALRT-----AAQRANAAFVPRPVRRL- 185
Query: 269 RSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLV 328
+V+A T A+ +PV+P KG +L
Sbjct: 186 -----SDVDARVTVVAAGCGAAALT----------------------GLPVRPVKGQILR 218
Query: 329 LENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFA 388
L + + GY + L P G +VLG++ +
Sbjct: 219 LRAPGGVAPGFRHVIRGYADGEHVYLVP-----------------RADGEVVLGATVEER 261
Query: 389 GFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGL 448
+T V + R+ + + P+L + L + ++ GLRP PD P++GP+PG
Sbjct: 262 S-DTTVTAGAVQRLLRAGVDLLPELTEYDLVEAVA------GLRPGTPDNAPILGPLPGR 314
Query: 449 SKVFLATGHEGLGLSLALGTAELVADMVLTN 479
V ATGH G+ L TAE +AD+V T
Sbjct: 315 PDVLAATGHHRHGIVLTPITAETIADLVTTG 345
>gi|319650994|ref|ZP_08005129.1| YurR protein [Bacillus sp. 2_A_57_CT2]
gi|317397350|gb|EFV78053.1| YurR protein [Bacillus sp. 2_A_57_CT2]
Length = 372
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 173/418 (41%), Gaps = 80/418 (19%)
Query: 85 IIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI--WMVHRTPGSEIWDL 142
IIIGAGI+G + A L + +V V+D+ P AT A G I W+ R
Sbjct: 5 IIIGAGILGASAAYHL-AKAGANVTVIDRKDPGQ-ATDAAAGIICPWLTQR--------- 53
Query: 143 ALRSNKLWKMLADS--------LRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQ 194
NK W LA +R+ D G+++ G++ + P +L ++ER
Sbjct: 54 ---RNKAWYALAKGGAAYYQTLIRELEKDGETKTGYQKVGAVSLHTDPVKLEKMEERA-- 108
Query: 195 LCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGN-RHF--- 250
A R + + +L + P + +D P S+ A + V+ + N R
Sbjct: 109 ---ATRRGD---APELGEITP---LSQDQTLELFPPLSKEYASVHVSGAARVNGRELRDA 159
Query: 251 ---ASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDL 307
A++ A H L + + V+A Y +++ AAG W+G +L
Sbjct: 160 LLRAAEKHGAVLVHGSAELLCQGDRVTAVKA----GGKQYEADSVIAAAGAWAG----EL 211
Query: 308 LRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSI 367
L+ I LD VKP+K ++ H +E G + + P N+ IL+
Sbjct: 212 LKPLGIQLD--VKPQKAQIV-----------HLQLEEEETGKWPVVMPP---NNQYILAF 255
Query: 368 SMTATTDVIGNLVLGSSRQ-FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRK 426
G +V+G++ + G++ V ++ I+++A P L D +
Sbjct: 256 EG-------GRIVVGATHEDNMGYDLRVTAGGLNEIFEKALAIAPGLSDGTFTE------ 302
Query: 427 VRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVD 484
R+G RPY P P+IG +PG+ ++++ G GL+ +A + L + +D
Sbjct: 303 ARVGFRPYTPGFLPIIGQIPGIKGLYISNGLGASGLTAGPFLGAQLAKLALGQEVDID 360
>gi|405375868|ref|ZP_11029885.1| Sarcosine oxidase beta subunit [Chondromyces apiculatus DSM 436]
gi|397085822|gb|EJJ16995.1| Sarcosine oxidase beta subunit [Myxococcus sp. (contaminant ex DSM
436)]
Length = 505
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 172/418 (41%), Gaps = 58/418 (13%)
Query: 61 ALGPTGYSRLNPITASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGA 120
AL P G P+ A ++ V+IIG GI+GL +A L + V V+++ C+GA
Sbjct: 108 ALRPEG-----PVPAKAK-----VVIIGGGIMGLALAYNLARAGETDVVVLERGYLCAGA 157
Query: 121 TGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGR 180
+G G + M TP + +LA RS L K A R+ G++ + +Q G + + +
Sbjct: 158 SGRNGGGVRMQWGTP--SLVELAKRSIDLMKGFA---RELGIN----VWLRQGGYIFLAK 208
Query: 181 TPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAV 240
T L+ V G+ ++ + P L + + A++ P D +
Sbjct: 209 TKPVAQRLERNVSLHNRFGVPTRLITPDEARSIVPGLTMKDSLIASYNPEDG---VIFPW 265
Query: 241 AYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300
++ + +G E Y D VT S G+V V+T++ + + +V+AAG WS
Sbjct: 266 PFLWGYAQGCQKRGVRVETYTD-VTGF--ETSGGQVRKVKTTRGDI-ACDTVVLAAGAWS 321
Query: 301 GSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVN 360
+ + + + +P +P + +L E ++G L G
Sbjct: 322 PQVAN------LVNVKLPNEPHRHEILSTEPLKP-----------FLGPLVSVLDSG--- 361
Query: 361 HGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLAD 420
L S + +++G +G +++ AG N + R + E P++
Sbjct: 362 ----LYFSQSMRGEIVGG--MGDAKEPAGLNMGSTLRFVSRFAQALMEQLPQV------G 409
Query: 421 FISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLT 478
+ + G PD P++G PGL + +G G G +A AE +A + T
Sbjct: 410 HVKVLRQWAGCYDVTPDNNPILGRTPGLDNLLQMSGFVGHGFMMAPAVAERMAKWMAT 467
>gi|424808298|ref|ZP_18233700.1| D-amino acid dehydrogenase, small subunit [Vibrio mimicus SX-4]
gi|342324835|gb|EGU20616.1| D-amino acid dehydrogenase, small subunit [Vibrio mimicus SX-4]
Length = 420
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 132/310 (42%), Gaps = 47/310 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 133 RQRGTLQVFRDEKQLAAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + ++ +G +F C ++ ++ VQT L
Sbjct: 193 PDDETGDCYL---FCQQLTELAQQQGVRFQF-----NCHIQQLVYEGKKIIGVQTDSG-L 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S + L +DIPV P KG+ L L + N+A
Sbjct: 244 IKADAYVVALGSYSTQFLKPL------GIDIPVYPVKGYSLTLPIIDE---NYA------ 288
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
P + +++T D I + + + AGF+ + + I
Sbjct: 289 ---------PQSTVMDETYKVALTRFADRI---RVAGTAELAGFDPAIPEARKATIEMVV 336
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P S ++ TGH LG ++A
Sbjct: 337 RDLFPHGGDFTQGQFWT------GFRPMTPDGTPIIGATP-YSNLYTNTGHGTLGWTMAC 389
Query: 467 GTAELVADMV 476
G+A ++AD++
Sbjct: 390 GSASILADVM 399
>gi|398865231|ref|ZP_10620753.1| glycine oxidase ThiO [Pseudomonas sp. GM78]
gi|398243755|gb|EJN29334.1| glycine oxidase ThiO [Pseudomonas sp. GM78]
Length = 366
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 39/226 (17%)
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
V+ +R + ++ VQTS ++ + +V+ AG WSG L+ L L++PV+P K
Sbjct: 175 VSGFIRQDE--KIVGVQTSTGAIHGDQ-VVLTAGAWSGDLLKSL------GLELPVEPVK 225
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
G +++ + + +L+ A G++++GS
Sbjct: 226 GQMILYKCAADFLPS------------------------MVLAKGRYAIPRRDGHILIGS 261
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
+ + G++ ++ ++ + A E P L + A+ + + GLRP P+G P IG
Sbjct: 262 TLEHEGYDKTPTESALESLKASAVELIPALAN---AEVVGHWA---GLRPGSPEGIPYIG 315
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
VPG ++L GH GL LA + +L AD++L +D AP+A
Sbjct: 316 RVPGFDGLWLNCGHYRNGLVLAPASCQLFADVMLGRAPIIDPAPYA 361
>gi|398913143|ref|ZP_10656316.1| glycine oxidase ThiO [Pseudomonas sp. GM49]
gi|398181104|gb|EJM68675.1| glycine oxidase ThiO [Pseudomonas sp. GM49]
Length = 366
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 275 EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNS 334
+V VQTS T+ S +V+ AG WSG L+ + L +PV+P KG +++ +
Sbjct: 184 KVVGVQTSTGTV-SGDQVVLTAGAWSGDLL------KLLDLTLPVEPVKGQMILYKCAAD 236
Query: 335 LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEV 394
+ +L+ A G++++GS+ + G++
Sbjct: 237 FLPS------------------------MVLAKGRYAIPRRDGHILIGSTLEHEGYDKTP 272
Query: 395 EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLA 454
+ ++ + A E P L D A+ + + GLRP P+G P IGPVPG ++L
Sbjct: 273 TGSALESLKASAVELIPALAD---AEVVGHWA---GLRPGSPEGIPYIGPVPGFDGLWLN 326
Query: 455 TGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D AP+A GR
Sbjct: 327 CGHYRNGLVLAPASCQLFADVMLGRAPIIDPAPYAPAGR 365
>gi|296135940|ref|YP_003643182.1| FAD dependent oxidoreductase [Thiomonas intermedia K12]
gi|295796062|gb|ADG30852.1| FAD dependent oxidoreductase [Thiomonas intermedia K12]
Length = 430
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 174/454 (38%), Gaps = 89/454 (19%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGAT---GAGQ---GYI--------- 128
VI++GAG+IG T A L + V V+D+ C+ T AGQ GY
Sbjct: 3 VIVLGAGVIGTTTA-YYLAKAGAEVTVIDRQNACAMETSFANAGQVSPGYSTPWAAPGIP 61
Query: 129 -----WMVHR------TPGSEIWDL-----ALRS--------NKLWKM-LADSLRD--QG 161
WM R P +W L LR+ NK M LA+ R Q
Sbjct: 62 LKAVKWMFQRHAPLAIRPDGTLWQLRWMAQMLRNCSAERYAVNKERMMRLAEYSRASLQA 121
Query: 162 LDPLQVIGWKQT--GSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV 219
L I ++Q G+L + R+ +L ++ V L E G+ E L L Q EP L
Sbjct: 122 LRTETGIAYEQRTGGTLQVFRSQAQLDAVQRDVTVLEECGVPYELLDRDQLAQVEPGLAH 181
Query: 220 GEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
D LP+D D + + + R K + + T S+ +
Sbjct: 182 ARDRLVGGLRLPHDETGDCQIFTTRLGEMARELGVKFEFGQ------TLRGLSSDGQRIT 235
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
VQ L + + ++ GS D L + LD+PV P KG+ L
Sbjct: 236 GVQVGDAVLTADRYVLAL-----GSYTRDFL--APLGLDLPVYPVKGYSLT--------- 279
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
V D +L P + I++T I +G + GF+ +
Sbjct: 280 ---------VPLTDESLAPRSTVLDETYKIALTRFDQRI---RVGGMAELGGFDLRLNPR 327
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+ + + +P DL A F + GLRP PD P++G ++L TGH
Sbjct: 328 RRETLEMVTRDLFPG-GDLAAATFWT------GLRPMTPDSTPIVGAT-RYPNLYLNTGH 379
Query: 458 EGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
LG ++A G+ +V+D+VL ++ A ++
Sbjct: 380 GTLGWTMACGSGRVVSDLVLNRKPEISIAGLGIE 413
>gi|424892074|ref|ZP_18315654.1| glycine/D-amino acid oxidase, deaminating [Rhizobium leguminosarum
bv. trifolii WSM2297]
gi|424893697|ref|ZP_18317277.1| glycine/D-amino acid oxidase, deaminating [Rhizobium leguminosarum
bv. trifolii WSM2297]
gi|393183355|gb|EJC83392.1| glycine/D-amino acid oxidase, deaminating [Rhizobium leguminosarum
bv. trifolii WSM2297]
gi|393184978|gb|EJC85015.1| glycine/D-amino acid oxidase, deaminating [Rhizobium leguminosarum
bv. trifolii WSM2297]
Length = 412
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 177/460 (38%), Gaps = 105/460 (22%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IW- 140
++++GAGIIG+ IA +L ++V +VD+ P GA+ I + P S IW
Sbjct: 4 IVVVGAGIIGVAIAYELQ-RRGVAVTLVDRDAPGMGASYGNMASIAVTEFMPASRPGIWA 62
Query: 141 -----------DLALRSNKLWKMLADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEELVML 188
+ +R L K+ LR P ++ + G++L GR E+L L
Sbjct: 63 QMPKWLLDPEGPVRIRPGYLPKLAPWFLRFLAASRPSKLRELEAAGAVLCGRVYEDLDAL 122
Query: 189 ----------------------------KERVKQLCEAGLRAEYLSSSDLLQAEPELM-- 218
+E + L R E L + + EP+L
Sbjct: 123 LQETRLAHMLTAEGCLSLYTDEAEFKADREHIDILKRFCFRHEILGGNAIRDLEPDLTTK 182
Query: 219 VGE-----DSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST 273
+G+ D+R+ PY L A IEK A GR E D V S
Sbjct: 183 IGKAVLFPDNRSITDPYK------LVTALIEKFE---ALGGRILE--GDVVGF---EQSE 228
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
V A++ + + + +V+AAG ++ L LLRE IP++ +G+
Sbjct: 229 VGVSALRLADGRTVAAEKVVLAAGAFTARL-SALLRE-----HIPLETERGY-------- 274
Query: 334 SLKLNHASMEAGYVGHHDLTLHPG-QVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNT 392
H + PG + H I T G + +G + + AG +
Sbjct: 275 ----------------HTQIMEPGISMRHSIIWPARAFMVTPTAGGIRVGGTVEMAGLDA 318
Query: 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVR-IGLRPYMPDGKPVIGPVPGLSKV 451
+ + KRA E P D + R +G RP +PD PV+GP V
Sbjct: 319 PPDYRRAKILVKRAQEALP--------DLDAERATEWMGHRPALPDTVPVMGPSAKRRNV 370
Query: 452 FLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
+ ATGH LGL+ A T L+AD++ VD P+ V
Sbjct: 371 WYATGHGHLGLTYAATTGRLMADLITGVEPPVDMKPYRVD 410
>gi|403747787|ref|ZP_10955610.1| glycine oxidase ThiO [Alicyclobacillus hesperidum URH17-3-68]
gi|403120062|gb|EJY54495.1| glycine oxidase ThiO [Alicyclobacillus hesperidum URH17-3-68]
Length = 374
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 175/398 (43%), Gaps = 59/398 (14%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWM---VHRTPGSE 138
+DV+++G G IG+ A +L + + V VVDK A+ A G + HR
Sbjct: 5 YDVVVVGGGAIGMASAWRL-AQAGMKVLVVDKGRLGGEASSAAAGMLGAQLEAHRA--GS 61
Query: 139 IWDLALRSNKLW-KMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCE 197
++L S L+ +A+ L G+D V Q G L + T + +L ER +
Sbjct: 62 FYELCRESRALYPTYVAELLEFTGIDAQLV----QNGILQLAYTEADATLLHERAYWQRQ 117
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
AG A ++ +S++ AEP ++ FLP D + A V + K + G
Sbjct: 118 AGDSAVWMDASEVQAAEP--VIRPVYGGLFLPDDGNVSAPRLVKALAK------AVGMSC 169
Query: 258 EFYH-DPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
+ PV+ + S TG V T+ + ++ K +++ AG WS SL+ L EI
Sbjct: 170 DVREGSPVSAI--SPETGGTFVVTTATDRFHADK-VLLTAGAWSSSLLRPLGYTWEI--- 223
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
+P KG +L + + L YVG + D
Sbjct: 224 ---QPVKGQMLSIRPPFGVSLRRTV----YVG-----------------GTYLVPKRD-- 257
Query: 377 GNLVLGSSRQF-AGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G +V+G++ + AGFN +V I + + E P L A+F+ + GLRP
Sbjct: 258 GTVVVGATEERDAGFNRDVTIGGISALSEALREIAPGLSH---AEFLQSWT---GLRPGS 311
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVA 473
PDG+P IG +PGL + +A GH G+ L+ TA++VA
Sbjct: 312 PDGEPRIGELPGLPGLMIAIGHFRNGILLSAVTAQMVA 349
>gi|224824362|ref|ZP_03697470.1| FAD dependent oxidoreductase [Pseudogulbenkiania ferrooxidans 2002]
gi|224603781|gb|EEG09956.1| FAD dependent oxidoreductase [Pseudogulbenkiania ferrooxidans 2002]
Length = 420
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 186/467 (39%), Gaps = 107/467 (22%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQL-LVGSDLSVAVVDKVVPCSGATGAGQGYIWM-- 130
+ +SR H ++++GAGI+G+ A QL L G + V +VD+ P + G +
Sbjct: 4 SPTSRAH---IVVVGAGIVGIATALQLRLAGCE--VTLVDRGEPAMETSYGNAGAFAVSD 58
Query: 131 ---------VHRTPG---SEIWDLALRSNKL-----WKM--------------------L 153
+ + PG + LALR L W + L
Sbjct: 59 VIPLAEPGVLRKVPGWMLDPLGPLALRWRYLPTLVPWLLRFVAASRPSRVAELTRAMAAL 118
Query: 154 ADSLRDQGLDPLQVIG----WKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSD 209
+ + D ++ G W++ G+L + R+ E V + G+ L ++
Sbjct: 119 LNRVNDDYAPLIERAGLTHLWRRHGNLTLYRSEAEFVAAEAAWHAKRAHGVEWRKLGRAE 178
Query: 210 LLQAEPELMVGEDSRAAF-LPYDSQLDAM------LAVAYIEKGNRHFASKGRYAEFYHD 262
L + P+ VG++ + A +P S +D L A+I +G R F D
Sbjct: 179 LERTAPQ--VGKEWQVAVNVPAWSHVDDPYTFSRGLFDAFIREGGR----------FVQD 226
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
V L ++ G + V+T+ + +V+A G WS + IP++
Sbjct: 227 EV--LATVSAAGRIAGVETANSGRLEADTVVIACGIWSDRFT------AQHQYRIPLESE 278
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
+G+ + L N AG HH + Q S S G L L
Sbjct: 279 RGYHVTLPN------------AGVALHHFI----------QCASESFVILPMGNGGLRLA 316
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADF-ISNRKVRIGLRPYMPDGKPV 441
+ + A + + W+RA K + + + DF S+ + +G RP +PD PV
Sbjct: 317 GTVELAHRDAPPD-------WRRAHILIDKAKRI-VGDFDASDMSMWMGNRPSVPDTVPV 368
Query: 442 IGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
IGP P + ++ ATGH LGL+LA T L+ DM+ P D +P+
Sbjct: 369 IGPAPDSAGLYFATGHGHLGLTLAATTGALLTDMIQRRPSSFDVSPY 415
>gi|328544769|ref|YP_004304878.1| FAD dependent oxidoreductase [Polymorphum gilvum SL003B-26A1]
gi|326414511|gb|ADZ71574.1| FAD dependent oxidoreductase [Polymorphum gilvum SL003B-26A1]
Length = 391
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 167/409 (40%), Gaps = 44/409 (10%)
Query: 85 IIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLAL 144
+I G+GI+G +A L +SV VVD P + A+G+ G + + + PG + AL
Sbjct: 10 LIAGSGIVGAAVA-YFLAQRGVSVQVVDAEAPAAQASGSADGAVSVASKRPG-PLMTAAL 67
Query: 145 RSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEY 204
+L++ L+ D L +K + ++ + E +L L AG+R
Sbjct: 68 AGAELYRQLS-------ADGLFADLYKTRSTYIVATSDAECEVLTAHSAALSWAGVRVRE 120
Query: 205 LSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPV 264
L+ L P L +R A +D A+ Y +R + G V
Sbjct: 121 LTGGGLRTELPVL--SPATRMAIEVHDEGH----AIGY-RVVHRLLTASGVEVR-RGTAV 172
Query: 265 TCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKG 324
L+ V VQTS+ L++ I+ +G+ DLL +I++ PRKG
Sbjct: 173 ERLIIDPGGRRVVGVQTSRGPLHADVVILA-----TGNGTADLLGLRDILV-----PRKG 222
Query: 325 HLLVLENFNSLK--LNHASMEAGYV---GHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
LL+ E SL L A M Y+ G H T + G L I T G
Sbjct: 223 QLLITERAPSLNAALPGALMSGRYLLSKGSH--TGGASTPSRGIGLVIDPLRT----GQF 276
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
++G +R+ + + RI A P L D+ L + G R + DG
Sbjct: 277 LIGGTREDHADKRTNDLDAVSRILSDALVLLPALADIRLL------RTFAGARTAVADGL 330
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++G +PGL F+ATG EG G+ L + V +V +D + F
Sbjct: 331 PLVGRLPGLDNAFIATGFEGDGICLGPIIGKAVGQLVKGETPDIDLSAF 379
>gi|442320922|ref|YP_007360943.1| sarcosine oxidase subunit beta family protein [Myxococcus
stipitatus DSM 14675]
gi|441488564|gb|AGC45259.1| sarcosine oxidase subunit beta family protein [Myxococcus
stipitatus DSM 14675]
Length = 495
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 170/420 (40%), Gaps = 58/420 (13%)
Query: 60 RALGPTGYSRLNPITASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSG 119
+AL P G P+ A ++ V+IIG G++GL +A L + V V+++ C+G
Sbjct: 107 QALRPEG-----PVPAKAK-----VVIIGGGVMGLALAYNLARSGETDVVVLERGYLCAG 156
Query: 120 ATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIG 179
A+G G + M TP + +LA RS + K A R+ G++ + +Q G L +
Sbjct: 157 ASGRNGGGVRMQWGTPA--LVELAKRSIDVMKGFA---REMGIN----VWLRQGGYLFLA 207
Query: 180 RTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLA 239
R PE L+ V G+ ++ P L + A+F P D +
Sbjct: 208 RKPEVAKRLERNVALHNRYGVPTRLVTPDAARDIVPGLTMKGCVAASFNPEDGVIFPWPF 267
Query: 240 VAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCW 299
+ +G R KG E Y + VT S G+V V+T + + + +V+A+G W
Sbjct: 268 LWGYAQGCRK---KGVRVETYTE-VTGF--EVSGGQVRKVKTDRGDI-ACDTVVLASGAW 320
Query: 300 SGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQV 359
S + + +D+P +P + +L E ++G L G
Sbjct: 321 SPQVAK------LVGVDLPNEPHRHEILSTEPLKP-----------FLGPLVSVLDSG-- 361
Query: 360 NHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLA 419
L S + +++G +G ++ G N + R E P++
Sbjct: 362 -----LYFSQSMRGEIVGG--MGDPKEPPGLNMGSTLRFVSRFAHALMEQLPQV------ 408
Query: 420 DFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN 479
+ + G PD P++G PGL + +G G G +A AE +A ++T
Sbjct: 409 GHVKVLRQWAGCYDVTPDNNPILGRTPGLDNLLQMSGFVGHGFMMAPAVAERMAAWMITG 468
>gi|423666527|ref|ZP_17641556.1| glycine oxidase ThiO [Bacillus cereus VDM034]
gi|423677420|ref|ZP_17652359.1| glycine oxidase ThiO [Bacillus cereus VDM062]
gi|401305253|gb|EJS10794.1| glycine oxidase ThiO [Bacillus cereus VDM034]
gi|401307035|gb|EJS12501.1| glycine oxidase ThiO [Bacillus cereus VDM062]
Length = 369
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 170/405 (41%), Gaps = 61/405 (15%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE 138
C +DV IIG G+IG ++A L VA+V+K S A+ A G + + +
Sbjct: 2 CKKYDVAIIGGGVIGSSVA-HFLAERGHKVAIVEKQRIASEASKAAAGLLGVQAEWDAYD 60
Query: 139 -IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+++LA S ++ LA LR++ G+D IG+++ G I + +E + +
Sbjct: 61 PLFELARESRAIFPQLAAVLREKTGID----IGYEEKGIYRIAQNEDEKKRILHIMDWQQ 116
Query: 197 EAGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+ G + +L+ L + EP E ++G A + P D + A + + FA
Sbjct: 117 KTGEDSRFLTGDHLREKEPFLSESIIG----AVYYPKDGHVIA-------PELTKAFAHS 165
Query: 254 GRY--AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET 311
+ A+ Y +R + +V + TS+ + +K +V+A G WS L+H
Sbjct: 166 AAFSGADIYEQTEVFDIRIENN-KVTGIVTSEGVITCEK-VVIAGGSWSTKLLHYFHS-- 221
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTA 371
D P KG ++ + + L + E Y+
Sbjct: 222 ----DWGTYPVKGEVVAVRSRKPLLKSPIFQERFYI------------------------ 253
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
T G V+G++ + FN V+ I I +RA P L++ A++ S GL
Sbjct: 254 TPKRGGRYVIGATMKPHTFNKSVQPESITSILERAYTILPALKE---AEWESTWA---GL 307
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
RP P +G + ++ TGH G+ L+ + + +AD++
Sbjct: 308 RPQSNHEAPYMGEHEEIKGLYACTGHYRNGILLSPVSGQYMADLI 352
>gi|399889648|ref|ZP_10775525.1| FAD dependent oxidoreductase [Clostridium arbusti SL206]
Length = 481
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 181/405 (44%), Gaps = 62/405 (15%)
Query: 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP-CSGATGAGQGYIWMVHRTP-GSEI 139
+DV +IGAGI+G IAR+ L ++S+A+++K C+G TG+ ++ R P GSE
Sbjct: 2 YDVAVIGAGIVGSFIARE-LSKYNISIAILEKNSDVCNGTTGSNCCNVYEAFRQPLGSEN 60
Query: 140 WDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
L +R N+++ + + L + +K+ GSL +G E+ ++ + E+
Sbjct: 61 QKLIIRGNEIYDEICEELD---------VPFKRIGSLTVGFDEEDRKKVENMYAKALESN 111
Query: 200 LRA-EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAM----LAVAYIEKGNRHFASKG 254
+ ++ +L + EP + D + F Y S A+ ++VA +E + A
Sbjct: 112 AKGVRIVNREELAELEPNV----DEKFQFGFYSSTCGAIWPFQMSVALVENAMDNGAEL- 166
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
F + V + + +S+ ++ T+K K ++ AG ++ + + L +T+
Sbjct: 167 ----FLNSEVNNIEKQHSSFKI----TTKGRDIEAKCVINCAGVYADKINNMLAEKTK-- 216
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
+ P+K LV N G +H L P + + G L++ TA
Sbjct: 217 --FNIAPKKAQFLVFNN-----------NIGPFFNHVLNRCPKEGDRG--LNVLPTAG-- 259
Query: 375 VIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFIS-NRKVRI--GL 431
GN+++G Q A + E T D+I E K L+D I N+ +R GL
Sbjct: 260 --GNIMMGPVFQ-ATDDRESPDTSFDQI-----ELLKKKMSR-LSDKIPFNKVIRCFAGL 310
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
+G+ +IG + K F+ G++ A AE +A++V
Sbjct: 311 TAKEENGRVIIGESEEV-KGFINAASVDQGVTCAPAIAEKIAEIV 354
>gi|397732344|ref|ZP_10499079.1| FAD dependent oxidoreductase family protein [Rhodococcus sp. JVH1]
gi|396931918|gb|EJI99092.1| FAD dependent oxidoreductase family protein [Rhodococcus sp. JVH1]
Length = 397
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 165/412 (40%), Gaps = 66/412 (16%)
Query: 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTP--GS 137
T +I+G G+ GL IA L + V V+++ CSG TG G + + TP +
Sbjct: 3 QTVKFVIVGGGLEGLAIAWSLADRGETDVLVLERDTLCSGMTGKSSGVVRCHYGTPSLAA 62
Query: 138 EIW---DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQ 194
W D+ R+ +++ G D + ++Q G ++G + LK V
Sbjct: 63 MSWYGVDIFTRATEIF----------GDD----MAFRQCG-YVVGVGENNIDPLKANVAM 107
Query: 195 LCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKG 254
+ G+ +Y+ + + P L + + + A+ P + +A +A R +
Sbjct: 108 MQGLGIDIDYIGHDTMAELWPGLHLDDFAAFAYEPLGGRGEAYMAGMAFGASARKLGVRI 167
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
R + PV LL+ N+ G V V + + +++A G W+ L +
Sbjct: 168 RQST----PVASLLQ-NADGRVYGVTLANGDEVHAEQVILATGPWAPEL------GAGVG 216
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
+DIPVK ++ L++++ + + + G + P
Sbjct: 217 VDIPVKAQRAQLVLID--QGVPTPEVPVLSDLAGLQYICREPN----------------- 257
Query: 375 VIGNLVLGSSRQFA-------GFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKV 427
G L++G+S A ++ + + I++ + P + D +
Sbjct: 258 --GELLVGNSDHAAPEYIDPDKYSNRADDSTIEKNIGKLGNRLPDMPDPRIT------SS 309
Query: 428 RIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTN 479
+G PD P+IGP P + +FLATG G G ++ LVADM+L +
Sbjct: 310 YVGAYDVTPDYNPIIGPAP-VDGLFLATGFSGHGFKISPAVGRLVADMLLDD 360
>gi|328722668|ref|XP_003247632.1| PREDICTED: pyruvate dehydrogenase phosphatase regulatory subunit,
mitochondrial-like isoform 1 [Acyrthosiphon pisum]
Length = 889
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 168/413 (40%), Gaps = 45/413 (10%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLA 143
V+I G G++ ++A L+ + ++D+ PC G + G G + + P +E ++
Sbjct: 46 VVICGTGVVANSLAYHLVENGWSDIVLIDQGKPCGGTSHFGSGTLGLF--KPIAER-NII 102
Query: 144 LRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAE 203
+ S KL++ L +G D IG KQ GSL + +T + ++ LK R+ GL E
Sbjct: 103 MYSIKLYR----QLEAKGYD----IGLKQCGSLNLAQTKDRMIALKRRIAYSSPTGLHCE 154
Query: 204 YLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDP 263
L ++L + P L + ++P D D + K AS+G H
Sbjct: 155 MLGKNELKRLHPFLNTDDLEGGVWVPEDGVADPQAICKSLAK----LASEGG----AHYV 206
Query: 264 VTCLLRSNSTGE--VEAVQTSKNTLYSKKAIVVAAGCWS---GSLMHDLLRETEIVLDIP 318
C ++ T E ++ V TS+ +Y + V AG W+ G+L +R +P
Sbjct: 207 TNCHIQKVVTEEDRIKGVHTSRGFIYC-EYFVNCAGMWAREVGNLCSPKVR-------VP 258
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
V P + H V + L ++ + D ++ + N G ++ N
Sbjct: 259 VYPAE-HFYV----TTSPLPGIGVDLPCIRDFDSHIYAREYNSGFLVGGFEKIAKPAFLN 313
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+ L ++ + W++A P L+D ++ + P+G
Sbjct: 314 MKLIPPDWKKDMPSDWNHFM--PYWEKAMSRIPILKDAVYPTLANSPDT------FTPNG 365
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
K ++G P + F+A G G L A G + +A+ ++ + F VQ
Sbjct: 366 KWILGETPEIDNYFVAVGMNGNPLQGAGGIGKAMAEWIIEGKPTQEHLAFDVQ 418
>gi|170039287|ref|XP_001847472.1| nad dehydrogenase [Culex quinquefasciatus]
gi|167862873|gb|EDS26256.1| nad dehydrogenase [Culex quinquefasciatus]
Length = 849
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 163/408 (39%), Gaps = 33/408 (8%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLA 143
V+I GAG++G ++A L +V V+D+ SG + G G I + +P I
Sbjct: 400 VVIAGAGLLGNSVAYHLTQNGWNNVIVLDQRTIGSGTSDFGSGTIGLFKPSPERNI---I 456
Query: 144 LRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAE 203
L S KL++ L + + GL K+ GSL + +T + +V LK R+ AGL E
Sbjct: 457 LESVKLYERLQRAGHNVGL--------KRCGSLNLAQTHDRVVALKRRIAYNMPAGLYCE 508
Query: 204 YLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDP 263
+ + + P L V + A ++P D D L + + K ++ K Y +
Sbjct: 509 LIDAETVRNLHPLLNVDDIQGAVYVPKDCIADPALVLEVLAKLSKQAGVK------YFEN 562
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
+ G VE+++T T+ + + G WS L R IP P +
Sbjct: 563 CRVEFVNTKGGRVESLETDIGTIKCEY-FINCTGMWSRELGLRCKRPVR----IPAYPAQ 617
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
V N L A + V +D ++ Q+ ++ A N +
Sbjct: 618 HFFAVTAGLN---LPEAKLLPC-VRDYDSNMYARQLGSEMMVGWFEKAAKPAFEN-IKDI 672
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
+ + + + +W +A + P L D A I+N + PDG+ + G
Sbjct: 673 PKNWKEHIEDSAPNHWEPLWDKAVDRIPLLTD-SGAPTITNSPDN-----FTPDGRWIFG 726
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
+ ++A G G L + G + +A+ ++ ++ PF +Q
Sbjct: 727 ETAEVKNYYVACGMNGNPLQGSGGVGKALAEWIVNGTPTIEMLPFNIQ 774
>gi|294812160|ref|ZP_06770803.1| Putative glycine oxidase [Streptomyces clavuligerus ATCC 27064]
gi|326440684|ref|ZP_08215418.1| putative glycine oxidase [Streptomyces clavuligerus ATCC 27064]
gi|294324759|gb|EFG06402.1| Putative glycine oxidase [Streptomyces clavuligerus ATCC 27064]
Length = 445
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 174/413 (42%), Gaps = 52/413 (12%)
Query: 83 DVIIIGAGIIGLTIA-RQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE-IW 140
DV+I+G G+IGL A R G ++VA D + + +H G E +
Sbjct: 39 DVLIVGGGLIGLVTAWRAARHGLSVTVADPDPGGGAAQVAAGMLAAVTELHY--GEETLL 96
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKE--RVKQLCEA 198
L L S + + L + + +G++ G+L + ++ L+E ++Q C
Sbjct: 97 ALNLASARRYPAFVAELEEASG---ERVGYRACGTLAVALDADDRAHLRELHALQQRC-- 151
Query: 199 GLRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
GL +E+L+ + + EP L G R + D Q+D +A + R A
Sbjct: 152 GLESEWLTGRECRRLEPMLAPG--VRGGLRVDGDHQVDPRRLIAALRTACERAGVAFRRA 209
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
++R +TG V S T + +V+AAG SG L + +
Sbjct: 210 RAER---LTVVRGRATGAV----LSDGTAATAGQVVLAAGSLSGGL-----DGVPPEVAV 257
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
P++P KG +L L S H + + V V GQ+ + + G
Sbjct: 258 PIRPVKGQVLRL--ALSASPAHPPLLSRTVR--------AVVRGGQVYLVPRAS-----G 302
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
LV+G++ + G++T V + + + A E P + +L L + R GLRP PD
Sbjct: 303 ELVVGATSEEMGWDTTVTAGGVYELLRDAHELVPGITELPLTE------TRAGLRPCSPD 356
Query: 438 GKPVIGP--VPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P++GP +PGL LATGH G+ LA T + + + L ++ PF
Sbjct: 357 NAPLLGPTELPGL---LLATGHHRNGVLLAPVTGDALLAALTLGSLPEEARPF 406
>gi|409395675|ref|ZP_11246736.1| D-amino acid dehydrogenase small subunit [Pseudomonas sp. Chol1]
gi|409119612|gb|EKM95988.1| D-amino acid dehydrogenase small subunit [Pseudomonas sp. Chol1]
Length = 432
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 148/363 (40%), Gaps = 50/363 (13%)
Query: 121 TGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQV---IGW--KQTGS 175
TG+ Y+WM A+ ++ + LA+ RD LD L+ I + +Q G+
Sbjct: 80 TGSLDQYLWMAQMLRNCTAARYAVNKERMVR-LAEYSRD-CLDELRAETGIAYEGRQLGT 137
Query: 176 LLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFL--PYDSQ 233
+ RT ++ + + L +AG+ E L + + + EP L D A L P D
Sbjct: 138 TQLFRTQAQVDAAAKDIAVLEQAGVPYELLDRAGIARVEPALAKVSDKLAGALRLPNDQT 197
Query: 234 LDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIV 293
D L + + + R + R+ + + R S GE A L V
Sbjct: 198 GDCYLFTSRLAEMARELGVEFRFGQ-------NIERLESDGERIAGVWIDGQLERADHYV 250
Query: 294 VAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLT 353
+A G +S L+ L + P+ P KG+ L V D
Sbjct: 251 LALGSYSPQLLKPL------GIRAPIYPLKGYSLT------------------VPITDAA 286
Query: 354 LHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKL 413
+ P + +++T D I +G + AGF+ + + + A+ YP+
Sbjct: 287 MAPTSTILDETYKVAITRFDDRI---RVGGMAEIAGFDLSLNPRRRETLEMITADLYPQG 343
Query: 414 RDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVA 473
DL A+F + GLRP PDG P+IG +FL TGH LG ++A G+ L+A
Sbjct: 344 GDLSRAEFWT------GLRPATPDGTPIIGATR-YRNLFLNTGHGTLGWTMACGSGSLLA 396
Query: 474 DMV 476
D++
Sbjct: 397 DLI 399
>gi|398833299|ref|ZP_10591435.1| glycine/D-amino acid oxidase, deaminating [Herbaspirillum sp.
YR522]
gi|398221810|gb|EJN08207.1| glycine/D-amino acid oxidase, deaminating [Herbaspirillum sp.
YR522]
Length = 433
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 132/323 (40%), Gaps = 41/323 (12%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++L + L +AG+ E L++ L +AEP L D A L
Sbjct: 133 RQQGTLQLFRTRQQLDAAARDIAVLEDAGVPYELLTAEQLHRAEPALERVRDKLAGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L ++ + + RY V+ + + G + V L
Sbjct: 193 PNDETGDCQLFTTHLAQLAEQAGVRFRYG------VSIDSLAMAGGRIAGV-ACGGELVQ 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S LL+ V +IPV P KG+ + +
Sbjct: 246 GDAYVVALGSYS----PQLLQHVAGVPEIPVYPLKGYSITVPVL---------------- 285
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D + P + I++T D I +G + G++T + + +
Sbjct: 286 --DASAAPVSTILDETYKIAVTRFDDRI---RVGGMAEIVGYDTALRAKRRATLEMVVND 340
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P D A F + GLRP PDG P++G + +FL TGH LG +++ G+
Sbjct: 341 LFPGAGDTAQASFWT------GLRPMTPDGTPIVGAT-AVPNLFLNTGHGTLGWTMSCGS 393
Query: 469 AELVADMVLTNPLKVDSAPFAVQ 491
+L+AD++ + A A+Q
Sbjct: 394 GQLLADLISGRRPAIAHADLALQ 416
>gi|190894980|ref|YP_001985273.1| putative D-amino acid dehydrogenase [Rhizobium etli CIAT 652]
gi|190700641|gb|ACE94723.1| putative D-amino acid dehydrogenase protein [Rhizobium etli CIAT
652]
Length = 418
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 175/459 (38%), Gaps = 103/459 (22%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IW- 140
++++GAGIIG+ IA +L +V +VD+ P GA+ I + P S IW
Sbjct: 10 LVVVGAGIIGVVIAYELQRRGQ-TVVLVDRAAPGMGASYGNMASIAVTEFMPASRPGIWA 68
Query: 141 -----------DLALRSNKLWKMLADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEELVML 188
+ +R L K++ LR P ++ + G++L GR E+L L
Sbjct: 69 QMPKWLLDPEGPVRIRPGYLPKLVPWFLRFLAASRPSKLRELEAAGAVLCGRVYEDLDAL 128
Query: 189 ----------------------------KERVKQLCEAGLRAEYLSSSDLLQAEPELM-- 218
+E + L G R E L + + EP L
Sbjct: 129 LKETGLAHMLTAEGCLSLYTDDAEFRADREHIDILERFGFRHEILGGNAIRDLEPALTTK 188
Query: 219 VGE-----DSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST 273
+G+ D+R+ PY L A EK A GR E S
Sbjct: 189 IGKAVLFPDNRSITDPYK------LVAALTEKFQ---ALGGRIVE-----ADVAGFEQSE 234
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
V A++ + + + +V+AAG ++ L LLRE IP++ +G+
Sbjct: 235 AGVSALRLADGRTLAAEKVVLAAGAFTARL-SALLREP-----IPLETERGY-------- 280
Query: 334 SLKLNHASMEAGYVGHHDLTLHPG-QVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNT 392
H + PG + H I T G + +G + + AG +
Sbjct: 281 ----------------HTQIMEPGISMRHSIIWPARAFMVTPTAGGIRVGGTVEMAGLDA 324
Query: 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVF 452
+ + KRA E P+L+ +++ G RP +PD PV+G V+
Sbjct: 325 PPDYRRAKILVKRAREALPELKAEGSTEWM-------GHRPALPDTVPVMGRSARRRNVW 377
Query: 453 LATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
ATGH LGL+ A T L+AD+V VD P+ V
Sbjct: 378 YATGHGHLGLTYAATTGRLMADLVTGVEPPVDMKPYRVD 416
>gi|433544357|ref|ZP_20500744.1| oxidoreductase, DadA family protein [Brevibacillus agri BAB-2500]
gi|432184414|gb|ELK41928.1| oxidoreductase, DadA family protein [Brevibacillus agri BAB-2500]
Length = 376
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 171/420 (40%), Gaps = 65/420 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI--WMVHRTPGSEIW- 140
+I++GAGI+G + A QL V +VD+ AT A G I W+ R ++ W
Sbjct: 4 IIVVGAGILGASTAYQL-SKRGAEVIIVDRKHEGQ-ATDAAAGIICPWLSQRR--NQAWY 59
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA + + L L G G+ + G+L I + ++L L++R E
Sbjct: 60 KLAKEGARFYPSLIAELEQSGETS---TGYARVGALSIHKDTDKLQALEKRALTRKE--- 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHF------ASKG 254
A L +L +E +++A F P D A+ R A++
Sbjct: 114 DAPELGDVTMLSSE-------ETKALFPPLDEDYAAVHVTGAARVDGRALRDALLRAAQK 166
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
A ++ T L N T V V+ T+ + +++V AG W+ + L + ++
Sbjct: 167 NGAVLLYEEAT--LVHNGT-RVTGVRAGSETI-TADSVIVCAGAWANEIFQSLGVQFQVT 222
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
+KG ++ H G+ + + P N +L+
Sbjct: 223 F------QKGQIV-----------HLDYPDANTGNWPVVIPP---NDQYLLAFDQQ---- 258
Query: 375 VIGNLVLGSSRQ--FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
+V+G++ + AGF+T V + ++ +A + P+L D + R+G R
Sbjct: 259 ---KMVVGATHENDVAGFDTRVTPGGLHEVFTKALDIAPRLADSTFVE------ARVGFR 309
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQG 492
P+ P PV+GP+PG +F+A G GL++ +A + L + + +AV G
Sbjct: 310 PFTPGFLPVLGPLPGWEGIFVANGLGASGLTMGPYVGYQMAKLALGLDMDIQLEHYAVSG 369
>gi|423595268|ref|ZP_17571299.1| glycine oxidase ThiO [Bacillus cereus VD048]
gi|401222539|gb|EJR29129.1| glycine oxidase ThiO [Bacillus cereus VD048]
Length = 369
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 170/403 (42%), Gaps = 57/403 (14%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE 138
C +DV IIG G+IG ++A L G VA+V+K S A+ A G + + +
Sbjct: 2 CKKYDVAIIGGGVIGSSVAHFLAEGGH-KVAIVEKQRIASEASKAAAGLLGVQAEWDAYD 60
Query: 139 -IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+++LA S ++ LA LR++ G+D IG+++ G I + +E + +
Sbjct: 61 PLFELARESRAIFPQLAAVLREKTGID----IGYEEKGIYRIAQNEDEKKRILHIMDWQQ 116
Query: 197 EAGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASK 253
+ G + +L+ L + EP E ++G A + P D + A + K H A+
Sbjct: 117 KTGEDSRFLTGDHLREKEPFLSESIIG----AVYYPKDGHVIA----PELTKAFAHSAAI 168
Query: 254 GRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
A+ Y +R + +V + TS+ + +K +V+A G WS L+H
Sbjct: 169 SG-ADIYEQTEVFDIRIENN-KVTGIVTSEGVITCEK-VVIAGGSWSTKLLHYFHS---- 221
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
D P KG ++ + + L E Y+ T
Sbjct: 222 --DWGTYPVKGEVVAVRSRKPLLKAPIFQERFYI------------------------TP 255
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
G V+G++ + FN V+ I I +RA P L++ A++ S GLRP
Sbjct: 256 KRGGRYVIGATMKPHTFNKSVQPESITSILERAYTILPALKE---AEWESTWA---GLRP 309
Query: 434 YMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
P +G + ++ TGH G+ L+ + + +AD++
Sbjct: 310 QSNHEAPYMGEHEEIKGLYACTGHYRNGILLSPVSGQYMADLI 352
>gi|258619971|ref|ZP_05715011.1| D-amino acid dehydrogenase small subunit [Vibrio mimicus VM573]
gi|258587704|gb|EEW12413.1| D-amino acid dehydrogenase small subunit [Vibrio mimicus VM573]
Length = 455
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 132/310 (42%), Gaps = 47/310 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++G+R E L+ + L EP L ++ +L
Sbjct: 168 RQRGTLQVFRDEKQLAAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 227
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + ++ +G +F C ++ ++ VQT L
Sbjct: 228 PDDETGDCYL---FCQQLTELAQQQGVRFQF-----NCHIQQLVYEGKKIIGVQTDSG-L 278
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S + L +DIPV P KG+ L L + N+A
Sbjct: 279 IKADAYVVALGSYSTQFLKPL------GIDIPVYPVKGYSLTLPIIDE---NYA------ 323
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
P + +++T D I + + + AGF+ + + I
Sbjct: 324 ---------PQSTVMDETYKVALTRFADRI---RVAGTAELAGFDPAIPEARKATIEMVV 371
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P S ++ TGH LG ++A
Sbjct: 372 RDLFPHGGDFTQGQFWT------GFRPMTPDGTPIIGATP-YSNLYTNTGHGTLGWTMAC 424
Query: 467 GTAELVADMV 476
G+A ++AD++
Sbjct: 425 GSASILADVM 434
>gi|328722670|ref|XP_003247633.1| PREDICTED: pyruvate dehydrogenase phosphatase regulatory subunit,
mitochondrial-like isoform 2 [Acyrthosiphon pisum]
Length = 899
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 168/413 (40%), Gaps = 45/413 (10%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLA 143
V+I G G++ ++A L+ + ++D+ PC G + G G + + P +E ++
Sbjct: 46 VVICGTGVVANSLAYHLVENGWSDIVLIDQGKPCGGTSHFGSGTLGLF--KPIAER-NII 102
Query: 144 LRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAE 203
+ S KL++ L +G D IG KQ GSL + +T + ++ LK R+ GL E
Sbjct: 103 MYSIKLYR----QLEAKGYD----IGLKQCGSLNLAQTKDRMIALKRRIAYSSPTGLHCE 154
Query: 204 YLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDP 263
L ++L + P L + ++P D D + K AS+G H
Sbjct: 155 MLGKNELKRLHPFLNTDDLEGGVWVPEDGVADPQAICKSLAK----LASEGG----AHYV 206
Query: 264 VTCLLRSNSTGE--VEAVQTSKNTLYSKKAIVVAAGCWS---GSLMHDLLRETEIVLDIP 318
C ++ T E ++ V TS+ +Y + V AG W+ G+L +R +P
Sbjct: 207 TNCHIQKVVTEEDRIKGVHTSRGFIYC-EYFVNCAGMWAREVGNLCSPKVR-------VP 258
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
V P + H V + L ++ + D ++ + N G ++ N
Sbjct: 259 VYPAE-HFYV----TTSPLPGIGVDLPCIRDFDSHIYAREYNSGFLVGGFEKIAKPAFLN 313
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
+ L ++ + W++A P L+D ++ + P+G
Sbjct: 314 MKLIPPDWKKDMPSDWNHFM--PYWEKAMSRIPILKDAVYPTLANSPDT------FTPNG 365
Query: 439 KPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
K ++G P + F+A G G L A G + +A+ ++ + F VQ
Sbjct: 366 KWILGETPEIDNYFVAVGMNGNPLQGAGGIGKAMAEWIIEGKPTQEHLAFDVQ 418
>gi|56419934|ref|YP_147252.1| oxidoreductase [Geobacillus kaustophilus HTA426]
gi|375008403|ref|YP_004982036.1| putative oxidoreductase yurR [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|56379776|dbj|BAD75684.1| oxidoreductase [Geobacillus kaustophilus HTA426]
gi|359287252|gb|AEV18936.1| putative oxidoreductase yurR [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 374
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 171/413 (41%), Gaps = 62/413 (15%)
Query: 85 IIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI--WMVHRTPGSEIWDL 142
II+GAGI+G + A L +V ++D+ ATGA G + W+ R + + L
Sbjct: 4 IIVGAGILGASTAYH-LAKEGANVIIIDRGDKGQ-ATGAAAGIVCPWLSQRR-NQKWYRL 60
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
A K + L + L+ G G+ + G+L + ++L ++ER ++ R
Sbjct: 61 AKNGAKFYPSLIEELQALGETD---TGYARVGALCLHTDEQKLEQMEERARK-----RRE 112
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHF------ASKGRY 256
+ ++++ P +++ F P + A+ R A++
Sbjct: 113 DAPEMGEIVRLHP-----HEAKELFPPLGGEHHALYVSGAARVNGRAVRDALTNAAQKLG 167
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
A + L + VE V +K Y+ +A++V AG W+G L+ L +
Sbjct: 168 AAYIRGNAQILFEGSRVIGVE-VNGAK---YTAEAVIVTAGAWAGELLEPL------GVR 217
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
V P+KG ++ LE AG G + + P N+ +L+
Sbjct: 218 FAVTPQKGQIVHLEWL-----------AGETGRWPVVMPP---NNQYMLAFPR------- 256
Query: 377 GNLVLGSSRQ-FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G +++G++ + AG + I I +A P L + R+G RP
Sbjct: 257 GRIIIGTTHEDEAGMDVRATAGGIHEILDKALAVAPGLSACTYVE------TRVGFRPRT 310
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
P P+ GP+PG S V++A G GL++ + +A +V+ P ++D + +
Sbjct: 311 PGFLPIFGPLPGFSGVYIANGLGSSGLTVGPYLGKELAKLVIGLPTELDPSDY 363
>gi|194288932|ref|YP_002004839.1| D-amino acid dehydrogenase small subunit [Cupriavidus taiwanensis
LMG 19424]
gi|193222767|emb|CAQ68770.1| D-amino acid dehydrogenase subunit [Cupriavidus taiwanensis LMG
19424]
Length = 434
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 174/439 (39%), Gaps = 85/439 (19%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV-PCSGATGAGQGYI-------WMVHRTP 135
V+++G+G+IG+T A L + V VVD+ P G + A G I W P
Sbjct: 3 VLVLGSGVIGVTSA-WYLAKAGHEVTVVDREAGPALGTSFANAGQISPGYASPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKML------------------ADSLRD--QG 161
I W L++R + +W+ML A+ RD +
Sbjct: 62 LKAIKWMFQEHAPLSIRPDGTLFQLQWMWQMLLNCSAGRYAVNKERMVRLAEYSRDCIRA 121
Query: 162 LDPLQVIGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV 219
L I + +Q G+L + RT E+L + + L +AG+ + LS +L +EP L
Sbjct: 122 LRAETGIAYEGRQQGTLQVFRTDEQLHGAAKDIAVLEQAGVPYQLLSREELAASEPALAA 181
Query: 220 GEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
A LP D D L + + AS Y+ + L+ S G+
Sbjct: 182 VRHKLAGGLRLPNDETGDCALFTQRLA----NMASTLGVRFLYNRSIDGLM---SQGDAV 234
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
S +VVA G WS L+ LR ++PV P KG +
Sbjct: 235 TGAVVDGEPMSADLVVVALGSWSTQLVKPFLRGMS---NLPVYPLKGFSIT--------- 282
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
V D + P + +++T D I +G Q G++ ++
Sbjct: 283 ---------VPLTDASRGPVSTVLDETYKVALTRFDDRI---RVGGMAQIVGYDRSLDPA 330
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+ + +P D+ A F + GLRP PDG P++GP + ++L TGH
Sbjct: 331 KRRTLEHVVTDLFPGAGDVSQATFWT------GLRPMTPDGTPIVGPTQ-VRGLWLNTGH 383
Query: 458 EGLGLSLALGTAELVADMV 476
LG ++A G+ +L++D+V
Sbjct: 384 GTLGWTMACGSGKLLSDLV 402
>gi|257487491|ref|ZP_05641532.1| glycine oxidase ThiO [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|422679413|ref|ZP_16737687.1| glycine oxidase ThiO [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|331008761|gb|EGH88817.1| glycine oxidase ThiO [Pseudomonas syringae pv. tabaci str. ATCC
11528]
Length = 370
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 39/230 (16%)
Query: 264 VTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRK 323
V+ +R S V V T + + +++AAG WSG L+ L LD+PV+P K
Sbjct: 174 VSGFVREGS--RVSGVSTPSGDVTGDR-VILAAGAWSGELLKTL------GLDLPVEPVK 224
Query: 324 GHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383
G +++ + + +SM +L+ A G++++GS
Sbjct: 225 GQMILYKCASDFL---SSM---------------------VLAKGRYAIPRRDGHILIGS 260
Query: 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG 443
+ + GF+ ++ + A E P+L + A+ ++ GLRP P G P IG
Sbjct: 261 TLEHEGFDKTTTHAALESLKASAIELLPELAN---AEPVAQWA---GLRPGSPGGIPFIG 314
Query: 444 PVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
P+ G ++L GH GL LA + +L+ D++L +D AP+ GR
Sbjct: 315 PLAGFDGLWLNCGHYRNGLVLAPASCQLITDLLLNREPIIDPAPYTPLGR 364
>gi|220921103|ref|YP_002496404.1| FAD dependent oxidoreductase [Methylobacterium nodulans ORS 2060]
gi|254766974|sp|B8IJ86.1|DADA_METNO RecName: Full=D-amino acid dehydrogenase small subunit
gi|219945709|gb|ACL56101.1| FAD dependent oxidoreductase [Methylobacterium nodulans ORS 2060]
Length = 421
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 134/337 (39%), Gaps = 48/337 (14%)
Query: 145 RSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEY 204
R +L + D+LR+ + ++ G+L + RT ++L + E L E G+ E
Sbjct: 107 RMVRLAEFSRDALRELRAETGIAYDHREKGTLQLFRTRKQLDHVGEDTSVLDEYGVAYEV 166
Query: 205 LSSSDLLQAEPELMVGEDSRAAF-----LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
L + AEP L R F LP D DA L R A R
Sbjct: 167 LDEGGCIAAEPALA---RVRGGFVGGLRLPGDETGDAHLFT------QRLAAICARRGVS 217
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
+ VT + G + V+T + + A V A G ++ +L+ L L +PV
Sbjct: 218 FRYGVTVARLRHEAGRITGVETGTGEVLTADAYVAAMGSYTPALLRPL------GLALPV 271
Query: 320 KPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNL 379
P KG+ L L D + P + +++T D I
Sbjct: 272 YPVKGYSLTLPV------------------TDESAAPVSTVMDETFKVAITRLGDRI--- 310
Query: 380 VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGK 439
+G + + AGF+ + + + + +P D A F + GLRP PDG
Sbjct: 311 RVGGTAELAGFSGTLRGPRRATLERSLRDLFPAGGDARQAQFWT------GLRPMTPDGT 364
Query: 440 PVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
P++GP ++ TGH LG ++A G+ L+AD++
Sbjct: 365 PIVGPTV-YDNLYTNTGHGTLGWTMACGSGRLLADLI 400
>gi|358012173|ref|ZP_09143983.1| D-amino acid dehydrogenase small subunit [Acinetobacter sp. P8-3-8]
Length = 419
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 134/324 (41%), Gaps = 46/324 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+ G+L + R +L M++ + L E G+ E L DL + EP L +D L
Sbjct: 133 RSKGTLQVFRNEAQLEMVQRDIAVLKECGVPHELLLKDDLAKVEPALEHAKDKLVGGLHL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEF-YHDPVTCLLRSNSTGEVEAVQTSKNTLY 287
P D D L + +KG EF ++ V L+ E++ V + L
Sbjct: 193 PNDETGDCYLFTNALAN-----LAKGLGVEFKFNQNVEKLITEGD--EIKGVLVNGEVLT 245
Query: 288 SKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYV 347
+ + ++ GS D L+ E L++PV P KG+ L + +EA Y
Sbjct: 246 ADRYVLAF-----GSYSRDFLKPLE--LNLPVYPVKGYSLTI----------PIVEAAYA 288
Query: 348 GHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAA 407
P + I++T I +G + +GFN + +
Sbjct: 289 --------PQSTVLDETYKIAITRFDQRI---RVGGMAELSGFNHGLNTDRRGTLEMVTQ 337
Query: 408 EFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALG 467
+ +P DL A F + GLRP PD P+IG +FL TGH LG ++A G
Sbjct: 338 DLFPG-GDLAQASFWT------GLRPMTPDSTPIIGATR-FKNLFLNTGHGTLGWTMACG 389
Query: 468 TAELVADMVLTNPLKVDSAPFAVQ 491
+ +L++D+VL + + + ++Q
Sbjct: 390 SGKLISDLVLNHETDISTEGLSIQ 413
>gi|304404852|ref|ZP_07386512.1| glycine oxidase ThiO [Paenibacillus curdlanolyticus YK9]
gi|304345731|gb|EFM11565.1| glycine oxidase ThiO [Paenibacillus curdlanolyticus YK9]
Length = 377
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 126/315 (40%), Gaps = 54/315 (17%)
Query: 168 IGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL----MVGEDS 223
+ W +TGSL + +L+ ++ R+ G +AE + L + EP + + G S
Sbjct: 87 VEWLRTGSLNVAFHEADLLPMQTRLIWQNHFGAQAEIVEGEALRRLEPNVTARAVAGLYS 146
Query: 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
A + +L A L A G R A G + H + A+ T+
Sbjct: 147 PAESHVFAPKLVAALFEACRRLGVRLVAHAGAIEQVLHGSAAGV----------ALVTAA 196
Query: 284 NTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASME 343
+ +VV AG WSG+ E + L + V P +G + ++
Sbjct: 197 GDRFEGDRLVVCAGAWSGAY------EEALGLKLDVHPIRGQICAFDS------------ 238
Query: 344 AGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIW 403
G+V H + S G +V G+S AGF+T V IDR+
Sbjct: 239 -----------AAGEVRH-MVFSNQAYWVGKCDGTVVCGASEDVAGFDTTVTDRGIDRLI 286
Query: 404 KRAAEFYPKLRDLCLADFISNRKVR--IGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLG 461
+ P L VR GLRP DG+P++G + G ++ LA GH G
Sbjct: 287 RATDRTLPIL--------TGRETVRRWAGLRPATRDGQPLLGVLAGKPEIILAAGHYRNG 338
Query: 462 LSLALGTAELVADMV 476
+ L+ GTA++V D++
Sbjct: 339 ILLSPGTAKIVGDLL 353
>gi|238765458|ref|ZP_04626378.1| D-amino acid dehydrogenase small subunit [Yersinia kristensenii
ATCC 33638]
gi|238696315|gb|EEP89112.1| D-amino acid dehydrogenase small subunit [Yersinia kristensenii
ATCC 33638]
Length = 439
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 127/309 (41%), Gaps = 44/309 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++ + + L +AG+ L++ L EP L A L
Sbjct: 139 RQGGTLQLFRTEQQFNNAAKDIAVLDDAGVPYSLLTADQLASVEPALAKVSYKLAGGLRL 198
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + E+ + G F L+ N V + + +
Sbjct: 199 PNDETGDCKL---FTERLAKMAEQAGVKFIFNRSVDKLLVDGNQIAGV----LCGDDIMT 251
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S +L+ L+ IPV P KG+ L + N
Sbjct: 252 ADAYVVAFGAYSTALLAGLV-------SIPVYPLKGYSLTIPITNP-------------- 290
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
P + I++T D I +G + GFNT++EQ + + +
Sbjct: 291 ----AAAPFSTVLDETYKIAITRFDDRI---RVGGMAEIVGFNTQLEQARRETLEMVVGD 343
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
YP ++ A F + GLRP PDG P++G L ++L TGH LG ++A G+
Sbjct: 344 LYPDGGNISQATFWT------GLRPMTPDGTPIVGRT-SLKNLYLNTGHGTLGWTMACGS 396
Query: 469 AELVADMVL 477
+L+AD+++
Sbjct: 397 GQLLADIMV 405
>gi|104784414|ref|YP_610912.1| hydrogen cyanide synthase HcnC [Pseudomonas entomophila L48]
gi|95113401|emb|CAK18129.1| hydrogen cyanide synthase HcnC [Pseudomonas entomophila L48]
Length = 416
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 150/353 (42%), Gaps = 51/353 (14%)
Query: 139 IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCE 197
+D AL+SN ++ L L ++ G+D +++TG I + E+ + + VKQ+
Sbjct: 96 FFDFALQSNAIYPQLHQELIERHGMD----FKFERTGLKYIIQDEEDQLYAEHIVKQIPH 151
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAM-LAVAYIEKGNRHFASKGRY 256
+ +L L +EP + + FL D Q+ L A++E A++
Sbjct: 152 LADQVRWLDRDALRTSEPAVTLKATGALEFL-CDHQVSPFRLGDAFME------AARQNG 204
Query: 257 AEFYHD-PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVL 315
+ Y + +T +L S ++ V+T++ + ++ AAG W+ L E+
Sbjct: 205 VDLYPNVNITGVLHEGS--RIKGVRTAEAGEFHCGTLINAAGAWAAELSEWATGES---- 258
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
IPVKP KG +++ E L + Y+ D +G+IL
Sbjct: 259 -IPVKPVKGQIVLTERLPKLLDGCLTTSDCYMAQKD---------NGEIL---------- 298
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
+GS+ + GF+ I+ + + A P+L + L ++ GLRP
Sbjct: 299 -----IGSTTEEKGFDVSNTFPEINGLVQGAIRCVPQLAQVNL------KRTWAGLRPGS 347
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
PD P++GPV + F A GH G+ + T L+ +V L +D PF
Sbjct: 348 PDELPILGPVDNVQGYFNACGHFRTGILTSAITGVLLDRVVHNEALPLDITPF 400
>gi|422621054|ref|ZP_16689722.1| FAD dependent oxidoreductase [Pseudomonas syringae pv. japonica
str. M301072]
gi|330901402|gb|EGH32821.1| FAD dependent oxidoreductase [Pseudomonas syringae pv. japonica
str. M301072]
Length = 367
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
+ VQT + + +++AAG WSG L+ L + +PV+P KG +++ + +
Sbjct: 184 ISGVQTPARDITGDR-VILAAGAWSGELLKTL------GVALPVEPVKGQMILYKCASDF 236
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+SM +L+ A G++++GS+ + GF+
Sbjct: 237 L---SSM---------------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKTTT 272
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
Q ++ + A E P L A+ ++ GLRP P G P IGP+ G ++L
Sbjct: 273 QVALESLKASAVELLPPLAH---AEPVAQWA---GLRPGSPGGIPFIGPLGGFDGLWLNC 326
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L+ D++L +D AP+A GR
Sbjct: 327 GHYRNGLVLAPASCQLITDLLLEREPIIDPAPYAPTGR 364
>gi|407703246|ref|YP_006826831.1| Thiamine biosynthesis protein [Bacillus thuringiensis MC28]
gi|407380931|gb|AFU11432.1| Glycine oxidase ThiO [Bacillus thuringiensis MC28]
Length = 369
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 174/407 (42%), Gaps = 65/407 (15%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE 138
C +DV IIG G+IG ++A L VA+++K S A+ A G + + +
Sbjct: 2 CEKYDVAIIGGGVIGSSVA-HFLAERGHKVAIIEKQKIASEASKAAAGLLGVQAEWDAYD 60
Query: 139 -IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
+++LA S ++ LA LR++ G+D IG+++ G I + +E KER+ +
Sbjct: 61 PLFELARESRAIFPQLATVLREKTGID----IGYEEKGIYRIAQNEDE----KERILHIM 112
Query: 197 E----AGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRH 249
+ G + +L+ LL+ EP E ++G A + P D + A + K H
Sbjct: 113 DWQQKTGEDSYFLTGDHLLEKEPFLSESIIG----AVYYPKDGHVIA----PELTKAFAH 164
Query: 250 FASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLR 309
AS A+ Y +R + +V + TS+ + +K +V+A G WS L+ R
Sbjct: 165 SASISG-ADIYEQTEVFDIRIENN-KVTGIVTSEGIITCEK-VVIAGGSWSTKLLGHFHR 221
Query: 310 ETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM 369
E P KG ++ + + L E Y+ P +
Sbjct: 222 EW------GTYPVKGEVVAVRSRKPLLKAPIFQERFYIA-------PKRG---------- 258
Query: 370 TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI 429
G V+G++ + FN V+ I I +RA P L++ A++ S
Sbjct: 259 -------GRYVIGATMKPHTFNKTVQPESITSILERAYTILPALKE---AEWES---AWA 305
Query: 430 GLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
GLRP P +G + ++ TGH G+ L+ + + +AD++
Sbjct: 306 GLRPQSNHEAPYMGEHEEIKGLYACTGHYRNGILLSPVSGQYMADLI 352
>gi|255038020|ref|YP_003088641.1| FAD dependent oxidoreductase [Dyadobacter fermentans DSM 18053]
gi|254950776|gb|ACT95476.1| FAD dependent oxidoreductase [Dyadobacter fermentans DSM 18053]
Length = 418
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 142/338 (42%), Gaps = 54/338 (15%)
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLI---GRTPEELVMLKERVKQLCE 197
D L S KL++ D +RD+ LD G ++ G L++ +T EE + + ++ +QL
Sbjct: 113 DYHLLSKKLYE---DLVRDENLD----YGLEEKGILMLYKSDKTGEEEIHVGKQGQQL-- 163
Query: 198 AGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYA 257
GL + LS + EP + + + + DA L + KG ++
Sbjct: 164 -GLDIDMLSREQVQALEPGIQLDVAGAVHY-----RCDAHLYPTALVKGLIQSITQLGAE 217
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
+ VT N GE++ V+T T Y +V+ G W L + L I
Sbjct: 218 IVTNTEVTGFDIQN--GEIKRVKTVAKT-YEGDLVVMTGGSWLPQL------AKQAGLSI 268
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG 377
PV P KG+ + N + HP + H +L + A T + G
Sbjct: 269 PVMPGKGYSFMEPN---------------------SQHP--IVHPALLLEARVAVTPMNG 305
Query: 378 NLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPD 437
+ G + + A N ++ ++ I ++YP+L ++ G RP PD
Sbjct: 306 QVRFGGTMELAPLNNQINMNRVEGIVNSIPKYYPELN----VAVPQKDRIWYGFRPCSPD 361
Query: 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADM 475
G P +G LS + +A GH +G+SL GT ++VA++
Sbjct: 362 GLPYLGYSKKLSNLIVAGGHGMMGISLGPGTGKIVAEL 399
>gi|332161938|ref|YP_004298515.1| D-amino acid dehydrogenase small subunit [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|325666168|gb|ADZ42812.1| D-amino acid dehydrogenase small subunit [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
Length = 425
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 44/308 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL--MVGEDSRAAFL 228
+Q G+L + RT ++ + + L +AG+ L++ L EP L + + + L
Sbjct: 124 RQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTADQLATVEPALAKVAHKLTGGLRL 183
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + K A + ++ V LL G+ A + +
Sbjct: 184 PNDETGDCKLFTERLAK----MAEQAGVKFIFNRSVEKLLVD---GDQIAGLLCGDDIIK 236
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S +L+ L+ IPV P KG+ L + N ++++
Sbjct: 237 ADAYVVAFGAYSTALLAGLV-------SIPVYPLKGYSLTIPITNPAGAPYSTV------ 283
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
+ I++T D I +G + GFNT++EQ + + +
Sbjct: 284 ------------LDETYKIAITRFDDRI---RVGGMAEIVGFNTQLEQARRETLEMVVGD 328
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
YP ++ A F + GLRP PDG P++G L ++L TGH LG ++A G+
Sbjct: 329 LYPDGGNISQATFWT------GLRPMTPDGTPIVGRT-SLKNLYLNTGHGTLGWTMACGS 381
Query: 469 AELVADMV 476
+L+AD++
Sbjct: 382 GQLLADIM 389
>gi|163850047|ref|YP_001638090.1| glycine oxidase ThiO [Methylobacterium extorquens PA1]
gi|163661652|gb|ABY29019.1| glycine oxidase ThiO [Methylobacterium extorquens PA1]
Length = 440
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 177/404 (43%), Gaps = 50/404 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIW-MVHRTPGSE-IW 140
DV ++GAG+IGL+IA + L + SVAVV++ SGA+ A G + PGS+ +
Sbjct: 58 DVAVVGAGLIGLSIAWR-LAQAGRSVAVVERGSVGSGASLAATGMLAPAAEHEPGSDLLL 116
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LAL S + W D+L+ + I +++ G+L+I +E+ L+ R +G+
Sbjct: 117 PLALESLRRWPAFRDALQAAS---GREIDYREDGTLVIAIGRDEVERLRFRHDLQRRSGV 173
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFY 260
AE+LS ++ EP L+ + P D+Q+D L + + +
Sbjct: 174 AAEWLSGPEVRAREP-LLRPNVTAGILCPLDAQVDPRLVMEAL------LCACEAAGVVI 226
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG--SLMHDLLRETEIVLDIP 318
+ V G V + + TL + +++AAG WSG SL+ L + L +P
Sbjct: 227 SEGVAVDGLERRGGRVTGLHAAGRTL-TADTVILAAGAWSGDASLLPSDLDVPD--LSVP 283
Query: 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGN 378
V+P KG L L + G + T ++ M D G+
Sbjct: 284 VRPLKGQSLALRT---------TKRTGTLSRMVWT-----------DAVHMAPKGD--GH 321
Query: 379 LVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDG 438
L++G++ + GF + V + + + A P + ++ + S G RP D
Sbjct: 322 LIVGATVEDCGFTSGVTAGGMFALLEGARRVLPGIEEMEIDAVWS------GFRPTSDDD 375
Query: 439 KPVI-GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPL 481
P+I PGL LATGH G LA TA+ VA ++ L
Sbjct: 376 APIIEEAAPGL---VLATGHHRNGYLLAPATADAVATLLTEGAL 416
>gi|359784409|ref|ZP_09287581.1| oxidoreductase protein [Halomonas sp. GFAJ-1]
gi|359298369|gb|EHK62585.1| oxidoreductase protein [Halomonas sp. GFAJ-1]
Length = 413
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 137/333 (41%), Gaps = 73/333 (21%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEY------LSSSDLLQAEPELMVGEDSR 224
++ G L I RTPE+L +RVK+ EA RA Y L + L EP+L D
Sbjct: 134 RREGWLEIYRTPEKLA---KRVKEAEEA--RALYNVQFAVLDRAALTAKEPDL--SSDII 186
Query: 225 AAFLPYDSQ-------LDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
A D L A A +++E+G R T + GE
Sbjct: 187 GAIHWLDPWTVADPGGLVAAYAASFVEQGGRILQ-------------TDINGFQQEGEGW 233
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
V T+ TL + + +VVA G W+G M L P ++G+ + + KL
Sbjct: 234 KVDTAAETLEADE-VVVALGPWAGEWMKKL------GYHFPTFVKRGYHMHYATQTNAKL 286
Query: 338 NHASMEA--GYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
N+ M+A GY+ L P +N G L+ T + L + Q G +V
Sbjct: 287 NYWLMDAEVGYL------LAP--MNAGVRLT-----TGAELDRLESPAHEQQLGAAEKVA 333
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+T+ L + C A G RP +PD KPVIGP P ++LA
Sbjct: 334 RTVF------------PLGERCDA------AAWKGARPCLPDMKPVIGPAPRHPGLWLAF 375
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
GH G +L T +L+ADM+ P +D APF
Sbjct: 376 GHGHQGFTLGPATGQLLADMMENKPTAIDMAPF 408
>gi|330863878|emb|CBX73969.1| D-amino acid dehydrogenase small subunit [Yersinia enterocolitica
W22703]
Length = 434
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 44/308 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL--MVGEDSRAAFL 228
+Q G+L + RT ++ + + L +AG+ L++ L EP L + + + L
Sbjct: 133 RQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTADQLATVEPALAKVAHKLTGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + K A + ++ V LL G+ A + +
Sbjct: 193 PNDETGDCKLFTERLAK----MAEQAGVKFIFNRSVEKLLVD---GDQIAGLLCGDDIIK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S +L+ L+ IPV P KG+ L + N ++++
Sbjct: 246 ADAYVVAFGAYSTALLAGLV-------SIPVYPLKGYSLTIPITNPAGAPYSTV------ 292
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
+ I++T D I +G + GFNT++EQ + + +
Sbjct: 293 ------------LDETYKIAITRFDDRI---RVGGMAEIVGFNTQLEQARRETLEMVVGD 337
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
YP ++ A F + GLRP PDG P++G L ++L TGH LG ++A G+
Sbjct: 338 LYPDGGNISQATFWT------GLRPMTPDGTPIVGRT-SLKNLYLNTGHGTLGWTMACGS 390
Query: 469 AELVADMV 476
+L+AD++
Sbjct: 391 GQLLADIM 398
>gi|270014463|gb|EFA10911.1| hypothetical protein TcasGA2_TC001737 [Tribolium castaneum]
Length = 877
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 166/416 (39%), Gaps = 51/416 (12%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMV----HRTPGSEI 139
++I GAG++ ++A L+ + V+++ SG + G G + + HR
Sbjct: 36 IVIAGAGVVANSVAYHLVQNGWSDIIVLEQGKIGSGTSHFGSGTLGLFKPIAHR------ 89
Query: 140 WDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
+L S KL++ L+D G D I +Q GS+ + +T + L+ LK R+ G
Sbjct: 90 -NLIWYSIKLYQ----QLQDMGYD----IQMRQCGSINLAQTNDRLIALKRRLAYNIPTG 140
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLD--AMLAVAYIEKGNRHFASKGRYA 257
L E LS ++L P L V + A ++P D+ + A+ V I A +G
Sbjct: 141 LYCELLSPNELKDLHPYLRVDDLKGAVWVPEDAVANPRAICDVLAI------LAQQGGAQ 194
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317
F H PV +L NST V V+T K + + V AG W+ +L + + I
Sbjct: 195 YFEHTPVDKVLTQNST--VYGVETPKGVI-KCEYFVNCAGMWA----RELGLQCSPQVRI 247
Query: 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD--V 375
P P + + + Y H G G + A D V
Sbjct: 248 PAYPAQHFYATTGRLTKIIDESTPIIRDYDAFTYAREHEGGFMIGWFEEEAKPAFEDSQV 307
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
+ + + F F +W++A P+L + C I N +
Sbjct: 308 PRDWLRHVKKDFNHFFP---------LWEQAIRRIPELSN-CKKPEIVNSPDN-----FT 352
Query: 436 PDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
PDG+ ++G ++ F+A G G L A G + VA+ ++ D PF VQ
Sbjct: 353 PDGRWILGETAEVTNYFVACGMNGNSLQGAGGIGKAVAEWIIEGEPTQDLLPFNVQ 408
>gi|355691425|gb|EHH26610.1| Dimethylglycine dehydrogenase, mitochondrial, partial [Macaca
mulatta]
Length = 832
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 171/412 (41%), Gaps = 63/412 (15%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL 142
+ +IIG G +G+++A L V +++K P +G+T G H PG + +
Sbjct: 17 ETVIIGGGCVGVSLAYHLAKAGMKDVVLLEKSEPTAGSTWHAAGLTTYFH--PGINLKKI 74
Query: 143 ALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
S KL++ L + QV+G+ Q GS+ + TP V + E Q+ G A
Sbjct: 75 HYDSIKLYEKLEEETG-------QVVGFHQPGSIRLATTP---VRVDEFKYQMTRTGWHA 124
Query: 203 --EYLSSSDLLQAE-PELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
+Y+ + +Q P L + + + P D +D + G R + + +Y
Sbjct: 125 TEQYIIEPEKIQEMFPLLNMNKVLAGLYNPGDGHIDPYSLTMALAAGARKYGALLKYPA- 183
Query: 260 YHDPVTCL-LRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGS------LMHDLL---R 309
PVT L RS+ T +VE Q S IV AAG W+ L H L+
Sbjct: 184 ---PVTSLKARSDGTWDVETPQGSMRA----NRIVNAAGFWAREVGKMIGLEHPLIPVQH 236
Query: 310 ETEIVLDIP-VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSIS 368
+ + IP VK K L VL + + Y+ L G + + +
Sbjct: 237 QYVVTSTIPEVKALKRELPVLRDLEG---------SYYLRQERDGLLFGPYESQEKMKVQ 287
Query: 369 MTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKR---AAEFYPKLRDLCLADFISNR 425
+ T+ + GF E+ ++ +DRI + A E P L+ AD I+
Sbjct: 288 DSWVTNGVP----------PGFGKELFESDLDRIMEHIEAAMEMVPVLKK---ADIIN-- 332
Query: 426 KVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
V G Y PD P++GP G+ ++A G G G+ A G + ++D +L
Sbjct: 333 -VVNGPITYSPDILPMVGPHQGVRNYWVAIGF-GYGIIHAGGVGKYLSDWIL 382
>gi|332224808|ref|XP_003261560.1| PREDICTED: dimethylglycine dehydrogenase, mitochondrial [Nomascus
leucogenys]
Length = 866
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 181/439 (41%), Gaps = 65/439 (14%)
Query: 57 RPGRALGPTGYSRLNPITASSRCHT-FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115
RP G G + P++A ++ + +IIG G +G+++A L V +++K
Sbjct: 25 RPRSVCGREGEEK-PPLSAETQWKDRAETVIIGGGCVGVSLAYHLAKAGMKDVVLLEKSE 83
Query: 116 PCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGS 175
+G+T G H PG + + S KL++ L + QV+G+ Q GS
Sbjct: 84 LTAGSTWHAAGLTTYFH--PGINLKKIHYDSIKLYEKLEEETG-------QVVGFHQPGS 134
Query: 176 LLIGRTPEELVMLKERVKQLCEAGLRA--EYLSSSDLLQAE-PELMVGEDSRAAFLPYDS 232
+ + TP V + E Q+ G A +Y+ + +Q P L + + + P D
Sbjct: 135 IRLATTP---VRVDEFKYQMTRTGWHATEQYIIEPEKIQEMFPLLNMNKVLAGLYNPGDG 191
Query: 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTSKNTLYSKKA 291
+D + G R + + +Y PVT L RS+ T ++E Q S
Sbjct: 192 HIDPYSLTMALAAGARKYGALLKYPA----PVTSLKARSDGTWDIETPQGSMRA----NR 243
Query: 292 IVVAAGCWSGS------LMHDLL---RETEIVLDIP-VKPRKGHLLVLENFNSLKLNHAS 341
IV AAG W+ L H L+ + + IP VK K L VL +
Sbjct: 244 IVNAAGFWAREVGKMVGLEHPLIPVQHQYVVTSTIPEVKALKRELPVLRDLEG------- 296
Query: 342 MEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDR 401
+ YV L G + + + + TD + GF E+ ++ +DR
Sbjct: 297 --SYYVRQERDGLLFGPYESQEKMKVQDSWVTDGVP----------PGFGKELFESDLDR 344
Query: 402 IW---KRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHE 458
I K A E P L+ AD I+ V G Y PD P++GP G+ ++A G
Sbjct: 345 IMEHIKVAMEMVPVLKK---ADIIN---VVNGPITYSPDILPMVGPHQGVRNYWVAIGF- 397
Query: 459 GLGLSLALGTAELVADMVL 477
G G+ A G + ++D +L
Sbjct: 398 GYGIIHAGGVGKYLSDWIL 416
>gi|399154208|ref|ZP_10754275.1| D-amino acid dehydrogenase small subunit [gamma proteobacterium
SCGC AAA007-O20]
Length = 428
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 138/318 (43%), Gaps = 62/318 (19%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPY 230
++ GSLL+ ++ +++ +K+ + L + ++ E L + +QAEP L
Sbjct: 133 RKQGSLLLFKSAKQIENIKKDLSLLEKLNIQHELLDLNGCIQAEPGLH----------HV 182
Query: 231 DSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL---LRSNSTGEVEAVQTSKNTLY 287
S+ + L A GN + + Y + CL ++ ++E +Q K +
Sbjct: 183 KSEFTSGLRFANDCTGNCYLFTNQLYKK-------CLEMGVKFEFNTQIEDIQIEKERIS 235
Query: 288 SKK---------AIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLN 338
S K + VVA G +S ++ ++I ++IP+ P KG+ + L N N
Sbjct: 236 SIKTNRGEFDSDSYVVALGSYSSKIL------SKIGINIPLYPVKGYSITLPVLN----N 285
Query: 339 HASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTI 398
+ ++ + D T G G + ++ TA G+N E+ +
Sbjct: 286 EDAPQSTII---DDTFKIGITRLGNNIRVAGTA--------------HLTGYNLELREKS 328
Query: 399 IDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHE 458
+ + +P C + K GLRP PDG P+IG P S ++L TGH
Sbjct: 329 LSLLKHGLNRLFPYATGKC-----DDMKFWAGLRPNTPDGPPIIGSTP-YSNLYLNTGHG 382
Query: 459 GLGLSLALGTAELVADMV 476
LG +++LG+ +L+AD++
Sbjct: 383 TLGWTMSLGSGKLLADII 400
>gi|410693739|ref|YP_003624360.1| D-amino acid dehydrogenase small subunit [Thiomonas sp. 3As]
gi|294340163|emb|CAZ88535.1| D-amino acid dehydrogenase small subunit [Thiomonas sp. 3As]
Length = 430
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 170/454 (37%), Gaps = 89/454 (19%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGAT---GAGQ---GYI--------- 128
VI++GAG+IG T A L + V V+D+ C+ T AGQ GY
Sbjct: 3 VIVLGAGVIGTTTA-YYLAKAGAEVTVIDRQNACAMETSFANAGQVSPGYSTPWAAPSIP 61
Query: 129 -----WMVHR------TPGSEIWDL-----ALRS--------NKLWKMLADSLRDQGLDP 164
WM R P +W L LR+ NK M L
Sbjct: 62 LKAVKWMFQRHAPLAIRPDGTLWQLHWMAQMLRNCSAERYAVNKERMMRLAEYSRASLQE 121
Query: 165 LQV---IGWKQT--GSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV 219
L+ I ++Q G+L + R+ +L ++ V L E G+ E L L Q EP L
Sbjct: 122 LRTETGIAYEQRTGGTLQVFRSQAQLDAVQRDVTVLEECGVPYELLDRDQLAQVEPGLAH 181
Query: 220 GEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
D LP+D D + + + R K + + T S+ +
Sbjct: 182 ARDRLVGGLRLPHDETGDCQIFTTRLGETARELGVKFEFGQ------TIRGLSSDGQSIT 235
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
VQ L + + ++ GS D L + LD+PV P KG+ L
Sbjct: 236 GVQAGGAVLTADRYVLAL-----GSYTRDFL--APLGLDLPVYPVKGYSLT--------- 279
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
V D L P + I++T I +G + GF+ +
Sbjct: 280 ---------VPLTDEALAPRSTVLDETYKIALTRFDQRI---RVGGMAELGGFDLRLNPR 327
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGH 457
+ + + +P DL A F + GLRP PD P++G ++L TGH
Sbjct: 328 RRETLEMVTRDLFP-CGDLAAATFWT------GLRPMTPDSTPIVGAT-RYPNLYLNTGH 379
Query: 458 EGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
LG ++A G+ +V+D+VL ++ A ++
Sbjct: 380 GTLGWTMACGSGRVVSDLVLNRKPEISIAGLGIE 413
>gi|452855105|ref|YP_007496788.1| FAD-dependent glycine oxidase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452079365|emb|CCP21118.1| FAD-dependent glycine oxidase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 369
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 148/349 (42%), Gaps = 63/349 (18%)
Query: 139 IWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCE 197
+D A+ S +L++ L + G+D I G L + T E++ L+ ++ L
Sbjct: 62 FFDFAMHSQRLYEAAGQELEEACGID----IRRHNGGMLKLAYTEEDIARLR-KMDDLPS 116
Query: 198 AGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKG 254
+LS+ D L+ EP + ++G A+F+ D ++ KG R +
Sbjct: 117 ----VTWLSAEDALEKEPYASKDILG----ASFIKDDVHVEPYYVCKAYAKGARRYG--- 165
Query: 255 RYAEFY-HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313
A+ Y H VT + R N GE + TS +Y+ K +VVA+G WSG +++
Sbjct: 166 --ADIYEHTQVTSVKRVN--GEY-CITTSGGDVYADK-VVVASGVWSGRFF------SQL 213
Query: 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATT 373
L P P KG L + N D+ L + H + +
Sbjct: 214 GLGQPFFPVKGECLSVWN------------------DDIPL-IKTLYHDHCYVVPRKS-- 252
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
G LV+G++ + ++ + I+ + +A P + + + F + GLRP
Sbjct: 253 ---GRLVIGATMKQGDWSDTPDIGGIEAVIAKAKTMLPAIEHMKIDRFWA------GLRP 303
Query: 434 YMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLK 482
DGKP IG P S + A GH G+ LA TA +V DM+L +K
Sbjct: 304 GTRDGKPFIGRHPEDSGIIFAAGHFRNGILLAPATAAMVRDMILERQIK 352
>gi|424887676|ref|ZP_18311281.1| glycine/D-amino acid oxidase, deaminating [Rhizobium leguminosarum
bv. trifolii WSM2012]
gi|393175448|gb|EJC75491.1| glycine/D-amino acid oxidase, deaminating [Rhizobium leguminosarum
bv. trifolii WSM2012]
Length = 412
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 176/458 (38%), Gaps = 103/458 (22%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IW- 140
++++GAGIIG+TIA +L L+V +VD+ P GA+ + + P S IW
Sbjct: 4 IVVVGAGIIGVTIAYELQ-RRGLAVTLVDRDAPGKGASYGNMASVAVTEFMPASRPGIWA 62
Query: 141 -----------DLALRSNKLWKMLADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEELVML 188
+ +R + K++ LR P ++ + G++L R E+ L
Sbjct: 63 QMPKWLLDPEGPVRIRPAYMPKLVPWFLRFLAASRPSKLRELEAAGAVLCQRVYEDFDAL 122
Query: 189 ----------------------------KERVKQLCEAGLRAEYLSSSDLLQAEPELM-- 218
+E + L G R E + + + EP L
Sbjct: 123 LKQTGLTQMLTAEGCLSLYTDEAEFKADREHIDILERFGFRHEIIGGNAIRDLEPALTTK 182
Query: 219 VGE-----DSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST 273
+G+ D+R+ PY +L L + G R +G A F S
Sbjct: 183 IGKAVLFPDNRSISDPY--KLVTALFERFEALGGR--IVQGDVAGF----------EQSE 228
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
V A++ + + +V+AAG ++ L LLRE IP++ +G+
Sbjct: 229 AGVSAIRLADGRRVVAEKMVLAAGAFTARL-SALLRE-----HIPLETERGY-------- 274
Query: 334 SLKLNHASMEAGYVGHHDLTLHPG-QVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNT 392
H + PG + H I T G + +G + + AG
Sbjct: 275 ----------------HTQIMEPGISMRHSIIWPARAFMVTPTAGGIRVGGTVEMAGLEA 318
Query: 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVF 452
+ + KRA E P+L ++ +G RP +PD PV+GP V+
Sbjct: 319 PPDYRRAKILVKRAREALPELNAEQATEW-------MGHRPALPDTVPVMGPSAKRRNVW 371
Query: 453 LATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
ATGH LGL+ A T L+AD+++ VD P+ V
Sbjct: 372 YATGHGHLGLTYAATTGRLMADLIMGVEPSVDMKPYRV 409
>gi|399047820|ref|ZP_10739688.1| glycine/D-amino acid oxidase, deaminating [Brevibacillus sp. CF112]
gi|398054195|gb|EJL46327.1| glycine/D-amino acid oxidase, deaminating [Brevibacillus sp. CF112]
Length = 376
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 171/420 (40%), Gaps = 65/420 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYI--WMVHRTPGSEIW- 140
+I++GAGI+G + A QL V +VD+ AT A G I W+ R ++ W
Sbjct: 4 IIVVGAGILGASTAYQL-SKRGAEVIIVDRKHEGQ-ATDAAAGIICPWLSQRR--NQAWY 59
Query: 141 DLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA + + L L G G+ + G+L I + ++L L++R E
Sbjct: 60 KLAKEGARFYPSLIAELEQSGETS---TGYARVGALSIHKDTDKLQALEKRALTRKE--- 113
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHF------ASKG 254
A L +L +E +++A F P D A+ R A++
Sbjct: 114 DAPELGDVTMLSSE-------ETKALFPPLDEDYAAVHVTGAARVDGRALRDALLRAAQK 166
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
A ++ T L N T V V+ T+ + +++V AG W+ + L + ++
Sbjct: 167 NGAVLLYEEAT--LVHNGT-RVTGVRAGSETI-TADSVIVCAGAWANEIFQPLGVQFQVT 222
Query: 315 LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTD 374
+KG ++ H G+ + + P N +L+
Sbjct: 223 F------QKGQIV-----------HLDYPDANTGNWPVVIPP---NDQYLLAFDQQ---- 258
Query: 375 VIGNLVLGSSRQ--FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR 432
+V+G++ + AGF+T V + ++ +A + P+L D + R+G R
Sbjct: 259 ---KMVVGATHENDVAGFDTRVTPGGLHEVFTKALDIAPRLADSTFVE------ARVGFR 309
Query: 433 PYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQG 492
P+ P PV+GP+PG +F+A G GL++ +A + L + + +AV G
Sbjct: 310 PFTPGFLPVLGPLPGWEGIFVANGLGASGLTMGPYVGYQMAKLALGLDMDIQLEHYAVSG 369
>gi|422296825|ref|ZP_16384485.1| FAD-binding oxidoreductase [Pseudomonas avellanae BPIC 631]
gi|407991939|gb|EKG33669.1| FAD-binding oxidoreductase [Pseudomonas avellanae BPIC 631]
Length = 367
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 36/202 (17%)
Query: 292 IVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHD 351
+++AAG WSG L+ L L +PV+P KG +++ + + +SM
Sbjct: 199 VILAAGAWSGDLLKTL------GLALPVEPVKGQMILYKCASDFL---SSM--------- 240
Query: 352 LTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYP 411
+L+ A G+ ++GS+ + GF+ ++ + A E P
Sbjct: 241 ------------VLAKGRYAIPRRDGHTLIGSTLEHEGFDKTTTHAALESLKASAIELLP 288
Query: 412 KLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAEL 471
+L + A+ I+ GLRP P+G P IGP+ G ++L GH GL LA + +L
Sbjct: 289 ELVN---AEPIAQWA---GLRPGSPEGIPFIGPLAGFDGLWLNCGHYRNGLVLAPASCQL 342
Query: 472 VADMVLTNPLKVDSAPFAVQGR 493
+ D++L P +D AP++ GR
Sbjct: 343 LTDLLLGRPPIIDPAPYSPVGR 364
>gi|153824657|ref|ZP_01977324.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae MZO-2]
gi|149741875|gb|EDM55904.1| D-amino acid dehydrogenase, small subunit [Vibrio cholerae MZO-2]
Length = 421
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 135/313 (43%), Gaps = 48/313 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + R ++L +++ ++ L ++ +R E L+ + L EP L ++ +L
Sbjct: 134 RQRGTLQVFRDEKQLAAIEKDMQLLAQSSVRFELLNVAQCLTHEPGLAPVQEKLVGGLWL 193
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRS--NSTGEVEAVQTSKNTL 286
P D D L + + +K + F+ D C ++ ++ VQT L
Sbjct: 194 PDDETGDCYLFCQQLTE-----LAKQQGVRFHFD---CHIQQLVCEGKKIIGVQTDLGLL 245
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
A VVA G +S SL+ + ++IPV P KG+ L L
Sbjct: 246 -KADAYVVALGSYSTSLLKPM------GIEIPVYPVKGYSLTLPII-------------- 284
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
D P + +++T +D I + + + AGF+ + + I A
Sbjct: 285 ----DEKFAPQSTVMDETYKVALTRFSDRIR---VAGTAELAGFDPAIPEARKATIEMVA 337
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D F + G RP PDG P+IG P + ++ TGH LG ++A
Sbjct: 338 RDLFPHGGDFAKGQFWT------GFRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMAC 390
Query: 467 GTAELVADMVLTN 479
G+A ++AD VLT+
Sbjct: 391 GSASILAD-VLTH 402
>gi|443319178|ref|ZP_21048414.1| glycine oxidase [Leptolyngbya sp. PCC 6406]
gi|442781247|gb|ELR91351.1| glycine oxidase [Leptolyngbya sp. PCC 6406]
Length = 525
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 160/409 (39%), Gaps = 67/409 (16%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW 140
T DV+IIG G I L IA QL D++V V+ + + + A P +
Sbjct: 4 TPDVLIIGGGAIALAIALQLRQ-RDITVTVLSRDFAEAASHRAAGMLAPGAEELPPGPML 62
Query: 141 DLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
DL RS + A L G D +G P ++ + ++ A
Sbjct: 63 DLCRRSLARYPDWARKLETLTGRD--------------VGYWPCGILSPRCQIPTDLTAH 108
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSR--------AAFLPYDSQLDAMLAVAYIEKGNRHFA 251
+L ++ +P L S A + P D+Q+D + A
Sbjct: 109 PTGTWLDAATAHHYQPGLTTAMASGGRSLAIAGAWWYPEDAQVDNRALTQTLR-----LA 163
Query: 252 SKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET 311
++ A+ D +T + VQT+ + ++AAG WS L
Sbjct: 164 AQDAGADL-QDGITVQGLVPRQCRIHQVQTTAGD-FQAGHYILAAGAWSSDL-------- 213
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTA 371
L IP+ P+KG + ++ + H + D L +V +G I +
Sbjct: 214 ---LPIPIFPKKGQMATVQ----VPPGHGT---------DQPLQ--RVIYGP-EGIYIVP 254
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
D G +V+G++ + GF + +D ++ A YP LR+ + R+ G
Sbjct: 255 RRD--GRIVIGATSESVGFTPGLTPAGLDHLFHGACHLYPALREFPV------RETWWGF 306
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNP 480
RP PD P++GP P + LATGH G+ L TAEL+ D +L NP
Sbjct: 307 RPCTPDEAPILGPSP-WENLTLATGHHRNGILLTPITAELITDYILGNP 354
>gi|422649165|ref|ZP_16712275.1| FAD-binding oxidoreductase [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330962689|gb|EGH62949.1| FAD-binding oxidoreductase [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 367
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V TS + + +++ AG WSG L+ L LD+PV+P KG +++ + +
Sbjct: 184 VSGVNTSSGVITGDR-VILTAGAWSGELLKTL------GLDLPVEPVKGQMILYKCASDF 236
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+SM +L+ A G++++GS+ + GF+
Sbjct: 237 L---SSM---------------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKTTT 272
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
Q ++ + A E P+L A+ I+ GLRP P+G P IGP+ G ++L
Sbjct: 273 QAALESLKASAIELLPQLAS---AEPIAQWA---GLRPGSPEGIPFIGPLAGFDGLWLNC 326
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L+ D++L +D +A GR
Sbjct: 327 GHYRNGLVLAPASCQLLTDLLLERAPIIDPTLYAPAGR 364
>gi|314934545|ref|ZP_07841904.1| putative glycine oxidase [Staphylococcus caprae C87]
gi|313652475|gb|EFS16238.1| putative glycine oxidase [Staphylococcus caprae C87]
Length = 372
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 118/240 (49%), Gaps = 27/240 (11%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHR-TPGSEIWD 141
DV+IIG+G+IG++IARQ L ++ +A++D+ VP A+ G + + ++++
Sbjct: 3 DVLIIGSGVIGMSIARQ-LSATNYDIAIIDRDVPGKHASYKAGGMLGAQNEFIEDNDLYK 61
Query: 142 LALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
LA+ S ++ L++SL ++ G+D I +K +G + I ++L L + + L +
Sbjct: 62 LAIESRGMFPKLSESLLNETGID----IQFKDSGLIKIANQEDDLESLTRQYEFLRQMDS 117
Query: 201 RAEYLSSSDLLQ-----AEPELMVGEDSRAAFLPYDSQLDA-MLAVAYIEKGNRHFASKG 254
+ LS+ +L+Q EP A +P D Q++A A + +H ++
Sbjct: 118 SVKLLSNDELIQLTNGNVEPAY------GAIHIPNDGQINANKYTKALFKSLQQHHITR- 170
Query: 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIV 314
+YH V + R N AV T + + +++A+G WS L+ + E++
Sbjct: 171 ----YYHQEVQSIDRRNG---YYAVCTDQMSPIEAHKVIIASGAWSSQLLKNYSLPREVI 223
>gi|239617400|ref|YP_002940722.1| FAD dependent oxidoreductase [Kosmotoga olearia TBF 19.5.1]
gi|239506231|gb|ACR79718.1| FAD dependent oxidoreductase [Kosmotoga olearia TBF 19.5.1]
Length = 380
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 160/387 (41%), Gaps = 65/387 (16%)
Query: 107 SVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD--LALRSNKLWKMLADSLRDQGLDP 164
V V++K SGATG G I R SE + LA+RS KL++ + D G+D
Sbjct: 30 DVVVLEKNYLSSGATGRCGGGI----RQQWSERMNIRLAMRSVKLFENFEE---DVGMD- 81
Query: 165 LQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSR 224
I + Q G LL+ T EE+ ++ VK E GL L+ ++ + P +
Sbjct: 82 ---IEYYQGGYLLLAYTDEEVGFFEKNVKMQQEEGLDVRILTKQEIERMFPFMNSEGVKL 138
Query: 225 AAFLPYDSQLDAMLAV-AYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK 283
A + P D + LA AY R A + H T + +N G++ VQTSK
Sbjct: 139 ATYCPTDGHANPHLATFAYARAAERMGAKI-----YTHTEATGIDVAN--GQIIGVQTSK 191
Query: 284 NTLYSKKAIVV-AAGCWSGSLMHDLLRETEIV--LDIPVKPRKGHLLVLENFNSLKLNHA 340
+ Y K ++V+ AAG +S RE ++ +++P + + + V E L H
Sbjct: 192 S--YIKTSVVINAAGGYS--------REVGLMAGVELPTESYRHQIFVTE-----PLEH- 235
Query: 341 SMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVL--GSSRQFAGFNTEVEQTI 398
L P ++ I T + GN ++ G + N
Sbjct: 236 ------------ILDPLVISFENNFYIRQTKS----GNFIMGQGDKDEPPSHNHNPSWRF 279
Query: 399 IDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHE 458
+ + ++ +F+P L D+ + K GL PD +P+I + + A G
Sbjct: 280 LKEMTQKMPKFFPFLEDVRVL------KHWAGLYNMSPDAQPIIDKADNVQDFYFAVGFS 333
Query: 459 GLGLSLALGTAELVAD-MVLTNPLKVD 484
G G LA E +A+ +V P KVD
Sbjct: 334 GHGFMLAPAVGEALAEWIVYGKPKKVD 360
>gi|317147956|ref|XP_001822405.2| FAD dependent oxidoreductase [Aspergillus oryzae RIB40]
Length = 443
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 167/415 (40%), Gaps = 68/415 (16%)
Query: 74 TASSRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV-PCSGATGAGQGYIWMVH 132
T S T D+ I+GAGI+G +A L +D V ++D+ G+TG G++ +
Sbjct: 24 TMESSKTTADIAIVGAGIVGSALA-YFLSQTDKKVVLIDRSFSELKGSTGHAPGFVGQFN 82
Query: 133 RTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERV 192
S L ++ +++ + P G+ G L I + E + L+ R
Sbjct: 83 E------------SEVLTRLAIETVGEYTKVPG---GFDVVGGLEIATSCEGVARLRSRC 127
Query: 193 KQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFAS 252
+ AGL AE +SS PEL+ ++ A + P D +A+ + H +
Sbjct: 128 EMAKRAGLSAELISSGQATSLAPELVNDDNQIALYFPGDGAANAIRITTFY-----HENA 182
Query: 253 KGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312
+ R E VT + ++N G V V T+ + +KK +++A G W+ +L +
Sbjct: 183 RARGVELIEAEVTEVQQAN--GCVNGVMTTSGLIPAKK-VIIATGIWATNL-------CK 232
Query: 313 IVLDIPVKPRKGHLLVLENFNSLKLNHA-----SMEAGYVGHHDLTLHPGQVNHGQILSI 367
+ IP+ P H + ++ KL A Y H G +H + +
Sbjct: 233 FDIPIPIVP-VAHPYMYGEHHAPKLRKAPWVRWPQHHVYARDHGTFFGLGSYDHAPVFNE 291
Query: 368 SM-TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRK 426
TA D IG QF D +A F P+ L R+
Sbjct: 292 PRDTAIGDWIG--------QF------------DETLSQAMRFIPEETQLV------PRE 325
Query: 427 VRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPL 481
G+ PD P++G +P + +++A + ++ A G A+ +A ++ P+
Sbjct: 326 RFNGIFSMTPDNMPLVGSIPSIEGLYMAA---AVWVTHAAGAAKFLAQILEDQPV 377
>gi|297675540|ref|XP_002815732.1| PREDICTED: dimethylglycine dehydrogenase, mitochondrial [Pongo
abelii]
Length = 866
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 181/439 (41%), Gaps = 65/439 (14%)
Query: 57 RPGRALGPTGYSRLNPITASSRCHT-FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115
RP G G + P++A ++ + +IIG G +G+++A L V +++K
Sbjct: 25 RPRSVCGREGEEK-PPLSAETQWKDRAETVIIGGGCVGVSLAYHLAKAGMKDVVLLEKSA 83
Query: 116 PCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGS 175
+G+T G H PG + + S KL++ L + QV+G+ Q GS
Sbjct: 84 LTAGSTWHAAGLTTYFH--PGINLKKIHYDSIKLYEKLEEETG-------QVVGFHQPGS 134
Query: 176 LLIGRTPEELVMLKERVKQLCEAGLRA--EYLSSSDLLQAE-PELMVGEDSRAAFLPYDS 232
+ + TP V + E Q+ G A +Y+ + +Q P L + + + P D
Sbjct: 135 IRLATTP---VRVDEFKYQMTRTGWHATEQYIIEPEKIQEMFPLLNMNKVLAGLYNPGDG 191
Query: 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCL-LRSNSTGEVEAVQTSKNTLYSKKA 291
+D + G R + + +Y PVT L RS+ T +VE Q S
Sbjct: 192 HIDPYSLTMALAAGARKYGALLKYPA----PVTSLKARSDGTWDVETPQGSMRA----NR 243
Query: 292 IVVAAGCWSGS------LMHDLL---RETEIVLDIP-VKPRKGHLLVLENFNSLKLNHAS 341
IV AAG W+ L H L+ + + IP VK K L VL +
Sbjct: 244 IVNAAGFWAREVGKMIGLEHPLIPVQHQYVVTSTIPEVKALKRELPVLRDLEG------- 296
Query: 342 MEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDR 401
+ Y+ L G + + + + T+ + GF E+ ++ +DR
Sbjct: 297 --SYYLRQERDGLLFGPYESQEKMKVQDSWVTNGVP----------PGFGKELFESDLDR 344
Query: 402 IW---KRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHE 458
I K A E P L+ AD I+ V G Y PD PV+GP G+ ++A G
Sbjct: 345 IMEHIKAAMEMVPVLKK---ADIIN---VVNGPITYSPDILPVVGPHQGVRNYWVAIGF- 397
Query: 459 GLGLSLALGTAELVADMVL 477
G G+ A G + ++D +L
Sbjct: 398 GYGIIHAGGVGKYLSDWIL 416
>gi|254559193|ref|YP_003066288.1| glycine oxidase [Methylobacterium extorquens DM4]
gi|254266471|emb|CAX22235.1| glycine oxidase [Methylobacterium extorquens DM4]
Length = 411
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 175/407 (42%), Gaps = 56/407 (13%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIW-MVHRTPGSEIWD 141
DV ++GAG+IGL+IA +L + SVAVV++ SGA+ A G + PGS++
Sbjct: 29 DVAVVGAGLIGLSIAWRL-AQAGRSVAVVERGSVGSGASLAATGMLAPAAEHEPGSDLLL 87
Query: 142 LALRSN-KLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGL 200
+ + W D+L+ + I ++ G+L+I +E+ L+ R +G+
Sbjct: 88 PLALESLRRWPAFRDALQAASG---REIDYRTDGTLVIAIGRDEVERLRFRHDLQRRSGV 144
Query: 201 RAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFA---SKGRYA 257
AE+LS ++ EP L+ + P D+Q+D L + + + S+G
Sbjct: 145 AAEWLSGPEVRAREP-LLRPNVTAGILCPLDAQVDPRLVMEALLRACEAAGVVISEGVAV 203
Query: 258 EFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG--SLMHDLLRETEIVL 315
E G V + + TL + +++AAG WSG SL+ L + L
Sbjct: 204 EGLE---------RRGGRVTGLHAAGRTLAADT-VILAAGAWSGDASLLPSDLDVPD--L 251
Query: 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV 375
+PV+P KG L L + G + T ++ M D
Sbjct: 252 SVPVRPLKGQSLALRT---------TKRTGTLSRMVWT-----------DAVHMAPKGD- 290
Query: 376 IGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM 435
G+L++G++ + GF + V + + + A P + ++ + S G RP
Sbjct: 291 -GHLIVGATVEDCGFTSGVTAGGMFALLEGARRVLPGIEEMEIDAVWS------GFRPTS 343
Query: 436 PDGKPVI-GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPL 481
D P+I PGL LATGH G LA TA+ VA ++ L
Sbjct: 344 DDDAPIIEEAAPGL---VLATGHHRNGYLLAPATADAVATLLTEGAL 387
>gi|161936344|ref|YP_133253.2| D-amino acid dehydrogenase small subunit [Photobacterium profundum
SS9]
Length = 418
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 182/448 (40%), Gaps = 102/448 (22%)
Query: 82 FDVIIIGAGIIGLTIARQLL-VGSDLSVAVVDKVVPCSGAT---GAGQ---GYI------ 128
+VI++G G+IGLT A L G D V V+D+ + T AGQ GY
Sbjct: 1 MEVIVLGCGVIGLTSAWYLAEAGHD--VTVIDRQSKSAEETSFANAGQISYGYSSPWAAP 58
Query: 129 --------WMVHR----------TPGSEIWDLALRSN---KLWKM-------LADSLRDQ 160
W+ + +P +W + +N + ++M +A+ RD
Sbjct: 59 GIPVKALKWLAQKHAPLKIKPSLSPDLYVWASKMLANCNQERYQMNKARMLRVANYSRDC 118
Query: 161 GLD-----PLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEP 215
+D P+ G +Q G+L + R ++ + + ++ L E+G R E L + + AEP
Sbjct: 119 LIDLRKHQPINYEG-RQQGTLQVFRNAAQIEAVAKDIQVLAESGTRYEELDVAGCIAAEP 177
Query: 216 ELMVGEDSRAA--FLPYDS-----QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLL 268
L +D LP D Q L I+ G + +H V
Sbjct: 178 GLKNVKDKLVGGLRLPDDETGDCYQFCQQLTELAIKAGVK-----------FHFNVDVQK 226
Query: 269 RSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLV 328
+ + G+V +V TS L + A V+A G + + + L IPV P KG+ L
Sbjct: 227 LNQTQGKVSSVSTSMGALKAD-AYVMAMG------SYSSSLLSPLGLSIPVYPVKGYSLT 279
Query: 329 LENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFA 388
+ D T P + ++MT I + + + A
Sbjct: 280 IP------------------VTDETQAPVSTVMDETYKVAMTRFDQRIR---VAGTAELA 318
Query: 389 GFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGL 448
G++ ++ + I + +P D+ A++ + GLRP PDG P+IG P
Sbjct: 319 GYDLDLSEQRKATIAMVVQDLFPNGGDMSKAEYWT------GLRPMTPDGAPIIGKTP-F 371
Query: 449 SKVFLATGHEGLGLSLALGTAELVADMV 476
S +F TGH LG ++A G+A L+AD++
Sbjct: 372 SNLFTNTGHGTLGWTMACGSARLLADVI 399
>gi|413958567|ref|ZP_11397806.1| D-amino acid dehydrogenase small subunit [Burkholderia sp. SJ98]
gi|413941147|gb|EKS73107.1| D-amino acid dehydrogenase small subunit [Burkholderia sp. SJ98]
Length = 430
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 180/441 (40%), Gaps = 93/441 (21%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV-PCSGATGAGQGYI-------WMVHRTP 135
++I+G+G++G+T A L + V V+D+ P + A G I W P
Sbjct: 3 IVILGSGVVGVTSA-YYLARAGHEVTVIDREAGPALETSFANAGQISPGYASPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKMLADSLRDQ--------------GLDPLQV 167
+ W LA+R + +W+ML + +D+ D LQ
Sbjct: 62 LKAVKWMFEKHAPLAIRLDGTMNQLQWMWQMLRNCTQDRYTVNKGRMVRLAEYSRDCLQA 121
Query: 168 I--------GWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL-M 218
+ + G+L + RT ++ + + L +A + E L++ +L +AEP L
Sbjct: 122 LRADTGISYEGRTGGTLQLFRTQQQFDGAGKDIAVLKDANVPFELLTADELKKAEPALAA 181
Query: 219 VGEDSRAAF-LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVE 277
V + LP D D + + K R Y+ + L +N G +
Sbjct: 182 VSQKLTGGLRLPNDETGDCQMFTTRLAAMAEALGVKFR----YNTSIDALAVAN--GRIA 235
Query: 278 AVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKL 337
VQ K L + + VVA G +S L+ DL++ IPV P KG+
Sbjct: 236 GVQCGKE-LVTADSYVVALGSYSPKLLGDLVK-------IPVYPLKGY------------ 275
Query: 338 NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397
S+ A V D P + I++T D I +G + G++ ++
Sbjct: 276 ---SITAPIV---DANRAPVSTVLDETYKIAITRFDDRI---RVGGMAEIVGYDKNLKAA 326
Query: 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIG--PVPGLSKVFLAT 455
+ + + +P D A F + GLRP PDG P++G PVP L FL T
Sbjct: 327 RRETLEMCVNDLFPGGGDTTNATFWT------GLRPMTPDGTPIVGRTPVPNL---FLNT 377
Query: 456 GHEGLGLSLALGTAELVADMV 476
GH LG +++ G+ +L+AD++
Sbjct: 378 GHGTLGWTMSCGSGQLLADLM 398
>gi|330811809|ref|YP_004356271.1| oxidoreductase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423699378|ref|ZP_17673868.1| glycine oxidase ThiO [Pseudomonas fluorescens Q8r1-96]
gi|327379917|gb|AEA71267.1| Putative oxidoreductase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|387997301|gb|EIK58631.1| glycine oxidase ThiO [Pseudomonas fluorescens Q8r1-96]
Length = 366
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 39/233 (16%)
Query: 261 HDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVK 320
H V+ +R G V V +S + + +V+AAG WSG L+ L L +PV+
Sbjct: 172 HCEVSGFIRDG--GRVVGVHSSAGEIRGDE-VVLAAGAWSGELLKTL------GLKLPVE 222
Query: 321 PRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLV 380
P KG +++ + + +SM +L+ A G+++
Sbjct: 223 PVKGQMILYKCASDFL---SSM---------------------VLAKGRYAIPRRDGHIL 258
Query: 381 LGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKP 440
+GS+ + GF+ T ++ + A + P L A+ + + GLRP P+G P
Sbjct: 259 VGSTLEREGFDKTPTDTALESLKASAQQLIPALAG---AEVVGHWA---GLRPGSPEGIP 312
Query: 441 VIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
IG VPG++ ++L GH GL LA + +L D++L +D P+A GR
Sbjct: 313 YIGEVPGVAGLWLNCGHYRNGLVLAPASCQLFTDLMLGREPVIDPVPYAPAGR 365
>gi|302869932|ref|YP_003838569.1| glycine oxidase ThiO [Micromonospora aurantiaca ATCC 27029]
gi|302572791|gb|ADL48993.1| glycine oxidase ThiO [Micromonospora aurantiaca ATCC 27029]
Length = 356
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 156/406 (38%), Gaps = 67/406 (16%)
Query: 86 IIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRT--PGSEIWDLA 143
++GAG +GL IA + L V V D P SGA+ G + V E+ L
Sbjct: 3 VVGAGPVGLAIAWRC-AQRGLRVVVHDDR-PGSGASSVAAGMLSPVAEAYFGEHELTALL 60
Query: 144 LRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA 202
+ S W A L G+D IG++ G+L++G T ++L GL
Sbjct: 61 IGSAARWPGFAAELAGASGVD----IGYRTEGTLVVGLTADDLAEAGRLWSYQRGLGLPI 116
Query: 203 EYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHD 262
L S+L EP L A P D Q+D VA + + R A
Sbjct: 117 TPLRPSELRDREPALAP-RVRGGAVAPGDHQVDPRRLVAALRTAVERAGVELRPA----- 170
Query: 263 PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPR 322
R + EV+A T A+ +PV+P
Sbjct: 171 ------RVGALSEVDAQVTVVAAGCGAAALT----------------------GLPVRPV 202
Query: 323 KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382
KG +L L + GY + L P G +V+G
Sbjct: 203 KGQVLRLRAPGGGPPGFRHVIRGYADSEPVYLVPRDS-----------------GEVVVG 245
Query: 383 SSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVI 442
++ + +TEV + + + AAE P+L + L + ++ GLRP PD P+I
Sbjct: 246 ATVEERA-DTEVTAGGVLTLLRAAAELVPELVEYELVEAVA------GLRPGTPDNAPII 298
Query: 443 GPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
GP+PG S V ATGH G+ L TA+LV ++++T APF
Sbjct: 299 GPLPGQSGVLAATGHHRHGIVLTPVTADLVTELIVTGEPDPALAPF 344
>gi|253989450|ref|YP_003040806.1| D-amino acid dehydrogenase small subunit [Photorhabdus asymbiotica]
gi|253780900|emb|CAQ84062.1| D-amino acid dehydrogenase small subunit [Photorhabdus asymbiotica]
Length = 433
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 176/445 (39%), Gaps = 101/445 (22%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDK---VVPCSGATGAGQ---GYI--------- 128
++++G+G+IG+T A LV V V+D+ + A AGQ GY
Sbjct: 4 ILVLGSGVIGVTSA-WYLVQQGHEVTVIDRQESAAEETSAANAGQISPGYATPWGAPGIP 62
Query: 129 -----WMVHRTPGSEIWDLALRSNK-------LWKML------------------ADSLR 158
WM R LA+R + +W+ML A+ R
Sbjct: 63 LKAIKWMFQRHA-----PLAIRPDGSLFQLRWMWQMLRNCDASHYAINKSRMVRLAEYSR 117
Query: 159 D-----QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQA 213
D + +Q G +Q G+L + RT ++ + L + G+ L++ L
Sbjct: 118 DCIKQLRADTGIQYEG-RQGGTLQLFRTNKQFDNAVNDIAVLEQEGVPYNLLTADKLATV 176
Query: 214 EPEL--MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSN 271
EP L + + + LP D D L + K A ++ V LL
Sbjct: 177 EPALAHVAHKLTGGLQLPNDETGDCQLFTKELAK----MAKTAGVTFLFNKQVKRLLVEG 232
Query: 272 STGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLEN 331
+ VQ + + + VVA G +S L+ DL++ IPV P KG+ L +
Sbjct: 233 HC--ITGVQCEDGVM-TADSYVVAMGAYSTDLLKDLVK-------IPVYPLKGYSLTMPI 282
Query: 332 FNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFN 391
D P + I+MT + I +G + GFN
Sbjct: 283 V------------------DAEWAPVSTVLDETYKIAMTRFDNRIR---VGGMAEIVGFN 321
Query: 392 TEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKV 451
+ + + + + YP+ ++ A+F + GLRP PDG P++GP + +
Sbjct: 322 LNILKARCETLKMVVQDLYPEGGNIAQANFWT------GLRPMTPDGTPIVGPTE-YNNL 374
Query: 452 FLATGHEGLGLSLALGTAELVADMV 476
+L TGH LG ++A G+++L+AD++
Sbjct: 375 YLNTGHGTLGWTMACGSSQLLADLI 399
>gi|335041066|ref|ZP_08534183.1| glycine oxidase ThiO [Caldalkalibacillus thermarum TA2.A1]
gi|334179043|gb|EGL81691.1| glycine oxidase ThiO [Caldalkalibacillus thermarum TA2.A1]
Length = 391
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 167/412 (40%), Gaps = 83/412 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEI---- 139
+ I+G GIIGL+IA + L V V++K ATGA G + P SEI
Sbjct: 26 LTIVGGGIIGLSIAFE-CAKRGLKVIVLEKTACGGQATGAAAGML-----APYSEIGEDP 79
Query: 140 ---WDLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQL 195
+ L S KL+ +R GL + ++GSL + + + LK R++
Sbjct: 80 DDFFTLCHHSLKLYPDWQQEVRTVSGL----AFEYTRSGSLYLAFHEADELALKSRLEWQ 135
Query: 196 CEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQ------LDAMLAVAYIEKGNRH 249
E G++AE + L EP L E A + P + + A+LA EK H
Sbjct: 136 KEWGVQAEIVRGQALRNLEPHL-TQEAVAALYYPDEHHVYTPDFVQALLAAC--EKMGVH 192
Query: 250 FASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLR 309
F LL ++T + +S V+A+G W+
Sbjct: 193 IVQHAGEVRFKEVTADGLL----------LETGEKGCFSTDQCVLASGAWTSFF------ 236
Query: 310 ETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEA-GYVGHHDLTLHPGQVNHGQILSIS 368
E + L +P+ P +G + E ++ H + GYV L G
Sbjct: 237 EEPLQLRLPIFPIRGQICAYEQ-GQEEIKHIIFSSQGYV------LSKGN---------- 279
Query: 369 MTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDL----CLADFISN 424
G +V G+S AGF+T + I R+ K + +P L+D C A
Sbjct: 280 --------GTIVCGASEDIAGFDTSTTEKGISRLVKWSRYLFPFLKDKEPFHCWA----- 326
Query: 425 RKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
GLRP DG P++G + V LA+GH G+ L+ TA++VAD++
Sbjct: 327 -----GLRPATQDGYPLLGRLRHQPNVILASGHYRNGILLSPVTAKVVADII 373
>gi|261343895|ref|ZP_05971540.1| D-amino acid dehydrogenase, small subunit family protein
[Providencia rustigianii DSM 4541]
gi|282568281|gb|EFB73816.1| D-amino acid dehydrogenase, small subunit family protein
[Providencia rustigianii DSM 4541]
Length = 415
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 138/326 (42%), Gaps = 54/326 (16%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPY 230
K GSLL+ P+ L L++ L G++ + L S LL EPEL E+
Sbjct: 136 KIQGSLLVAEKPKTLEKLRQHGDYLNRLGVKNQLLDQSQLLSREPEL--AENQLGGLFYP 193
Query: 231 DSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKK 290
D+ LA + ++ R F G VT + NS+ +A T+ ++
Sbjct: 194 DTGHVVELAELH-QRLERTFVQLGGKV-LTECEVTAI---NSSSASQAYVTTSQGIFVAD 248
Query: 291 AIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKG-HLLVLENFNSLKLNHASMEAGYVGH 349
+V+A G +S SL+ + R +++P++ +G HL++ + L + +SM+ ++
Sbjct: 249 KVVIAGGAFSKSLVKMVSR-----INVPLETERGYHLMLPKEKGRLSVPVSSMDRRFI-- 301
Query: 350 HDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEF 409
T + G L L + ++AG +RA F
Sbjct: 302 ----------------------MTPMNGGLRLAGTVEYAGLKRPPNM-------QRAQHF 332
Query: 410 YPKLRDLCLADFISNRKVR-IGLRPYMPDGKPVI---GPVPGLSKVFLATGHEGLGLSLA 465
P + S +G RP + D PVI GP VF A GH+ LGL+ A
Sbjct: 333 LPLANPMLKRSLDSQHNSEWMGFRPTISDSLPVIDQKGPY-----VF-AFGHQHLGLTHA 386
Query: 466 LGTAELVADMVLTNPLKVDSAPFAVQ 491
TA++V +M+ P +D +PF+++
Sbjct: 387 AITADIVNNMIHGQPTPIDCSPFSIK 412
>gi|398873424|ref|ZP_10628682.1| glycine oxidase ThiO [Pseudomonas sp. GM74]
gi|398199637|gb|EJM86573.1| glycine oxidase ThiO [Pseudomonas sp. GM74]
Length = 366
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 37/219 (16%)
Query: 275 EVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNS 334
+V VQTS + + IV+ AG WSG L+ + L +PV+P KG +++ +
Sbjct: 184 KVVGVQTSTGIVPGDQ-IVLTAGAWSGDLL------KLLDLALPVEPVKGQMILYKCAAD 236
Query: 335 LKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEV 394
+ +L+ A G++++GS+ + GF+
Sbjct: 237 FLPS------------------------MVLAKGRYAIPRRDGHILIGSTLEHEGFDKTP 272
Query: 395 EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLA 454
+ ++ + A E P L D A+ + + GLRP P+G P IGPVPG ++L
Sbjct: 273 TGSALESLKASAVELIPALAD---AEVVGHWA---GLRPGSPEGIPYIGPVPGFDGLWLN 326
Query: 455 TGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L AD++L +D AP+A GR
Sbjct: 327 CGHYRNGLVLAPASCQLFADVMLGRAPIIDPAPYAPAGR 365
>gi|384082154|ref|ZP_09993329.1| D-amino acid dehydrogenase small subunit [gamma proteobacterium
HIMB30]
Length = 416
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 37/212 (17%)
Query: 279 VQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLN 338
V+ + LY +VVAAG WS SL + +IP++ +G+ +
Sbjct: 237 VRCDDDDLYCD-FVVVAAGAWSKSLAR------TVGDNIPLETERGYNTTFDP------- 282
Query: 339 HASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTI 398
G DL H +HG ++S V ++ +G + + G N
Sbjct: 283 ---------GDFDLRTHLTFADHGFVVS-------KVGESMRVGGAVELGGLNAPPNFER 326
Query: 399 IDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHE 458
+ +A +F P + + +++ G RP MPD P+IG P SKV A GH
Sbjct: 327 SRILLSKAKQFLPSIDTIGCQEWM-------GFRPSMPDSLPLIGASPKQSKVVYAFGHG 379
Query: 459 GLGLSLALGTAELVADMVLTNPLKVDSAPFAV 490
LGL+ + TAELV +L P + SAPF+
Sbjct: 380 HLGLTQSAATAELVRATILGKPWPISSAPFSA 411
>gi|253997536|ref|YP_003049600.1| FAD dependent oxidoreductase [Methylotenera mobilis JLW8]
gi|253984215|gb|ACT49073.1| FAD dependent oxidoreductase [Methylotenera mobilis JLW8]
Length = 361
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 176/418 (42%), Gaps = 66/418 (15%)
Query: 77 SRCHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATG----AGQGYIWMVH 132
++ HT +IIG GI+G A +L + V +V++ S +G AG G I+ +
Sbjct: 2 AKPHT---MIIGGGIVGCMTAMEL-IHKGHRVTIVERNQIASQTSGESSWAGGGIIFPLL 57
Query: 133 RTPGSE-IWDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKER 191
SE + L S ++ L+ L + P + Q+G LL+ + +
Sbjct: 58 PWQYSEPVNALTKHSADFYRTLSQQLAQETGLPTDFV---QSGFLLLPK------FDIDA 108
Query: 192 VKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFA 251
+ C +R E +S + + + E A +LP Q+ Y+ + R +
Sbjct: 109 AQSWC---VRNE-VSVQPVKASAFGVQSSEGENALWLPTVCQIRP----PYLMQALRKWL 160
Query: 252 SKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRET 311
+ + H T LL T ++ QT+ S VV +G WS DLL+ T
Sbjct: 161 EQHQVTMLEH---TQLLPLEETQQLNEWQTTSGEKLSADQFVVTSGAWS----FDLLKAT 213
Query: 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTA 371
L+I KP +G +L+ + +L+ + G+ M
Sbjct: 214 SAKLNI--KPMRGQILLYQPQQNLE--QMVYKEGFY---------------------MIP 248
Query: 372 TTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGL 431
D G L+ GS+ + GF+ V + + + + +A P+L+ + S GL
Sbjct: 249 RLD--GYLLAGSTLEDVGFDNGVTEAVREELRMKAEAIMPELKGQAIIKHWS------GL 300
Query: 432 RPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFA 489
RP P+ P IG P + ++L TGH GL++A +A+L+A ++ +D++P+A
Sbjct: 301 RPGTPENLPTIGAHPTIKNLYLNTGHFRYGLTMAPASAKLIAAIISGESPTLDASPYA 358
>gi|349687505|ref|ZP_08898647.1| D-amino acid dehydrogenase small subunit [Gluconacetobacter
oboediens 174Bp2]
Length = 418
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 176/440 (40%), Gaps = 90/440 (20%)
Query: 84 VIIIGAGIIGLTIA--------------RQLLVGSDLSVAVVDKVVPCSGATGAGQGYI- 128
+I++G+G++G+T A RQ G + S A +V P + AG G
Sbjct: 3 IIVLGSGVVGVTSAWYLAQAGHEVTVVDRQPEAGLETSFANAGQVSPGYSSPWAGPGVPL 62
Query: 129 ----WMVHRTPGSEIWDLALRSNKLWKMLADSL----------------------RDQGL 162
W++ + W + LWK L L RD +
Sbjct: 63 KSIKWLLMKYRPFVFWPMP--DPHLWKWLVQMLENCTATAYDRNKGRMVRIAEYSRDMMM 120
Query: 163 DPLQVIGW----KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELM 218
+ G +Q G+L + RT ++L + ++ L + + E L+ ++AEP L
Sbjct: 121 ELRTSTGITYDDRQQGTLQVFRTQKQLDDIAGDIRVLEQYNVPYEILTREGCVKAEPGLG 180
Query: 219 VGEDSRAA--FLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
LP D DA L + + F++D + S+ G +
Sbjct: 181 TSAHKIVGGLRLPGDETGDAFLFTQRLAA-----LAAKAGVAFHYDTRIRTMTSDG-GRI 234
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
++TS+ + + + V++ G +S +++ L LD+P+ P KG+ L + N +
Sbjct: 235 TGIETSRGQMVAD-SYVLSLGSYSPAMVRHL------GLDLPIYPVKGYSLTADIVNEKQ 287
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
+++ D T G G+ + + TA + AGF+T++
Sbjct: 288 APASTI-------MDETFKIGITRLGERIRVGGTA--------------ELAGFSTKLRA 326
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + +P ++ A F + GLRP PDG P+IG +FL TG
Sbjct: 327 PRRETLEHSVTDLFPGGGNIPAARFWT------GLRPMTPDGTPIIGRTK-YDNLFLNTG 379
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG ++A G+ ++AD++
Sbjct: 380 HGTLGWTMACGSGRVLADIM 399
>gi|420258312|ref|ZP_14761050.1| D-amino acid dehydrogenase small subunit [Yersinia enterocolitica
subsp. enterocolitica WA-314]
gi|404514286|gb|EKA28083.1| D-amino acid dehydrogenase small subunit [Yersinia enterocolitica
subsp. enterocolitica WA-314]
Length = 434
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 44/308 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL--MVGEDSRAAFL 228
+Q G+L + RT ++ + + L +AG+ L++ L EP L + + + L
Sbjct: 133 RQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTADQLATVEPALAKVAHKLTGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + K A + ++ V LL G+ A + +
Sbjct: 193 PNDETGDCKLFTERLAK----MAEQAGVKFIFNRSVEKLLVD---GDQIAGVLWGDDIIK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S +L+ L+ IPV P KG+ L + N ++++
Sbjct: 246 ADAYVVAFGAYSTALLAGLV-------SIPVYPLKGYSLTIPITNPAGAPYSTV------ 292
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
+ I++T D I +G + GFNT++EQ + + +
Sbjct: 293 ------------LDETYKIAITRFDDRI---RVGGMAEIVGFNTQLEQARRETLEMVVGD 337
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
YP ++ A F + GLRP PDG P++G L ++L TGH LG ++A G+
Sbjct: 338 LYPDGGNISQATFWT------GLRPMTPDGTPIVGRT-SLKNLYLNTGHGTLGWTMACGS 390
Query: 469 AELVADMV 476
+L+AD++
Sbjct: 391 GQLLADIM 398
>gi|123442532|ref|YP_001006509.1| D-amino acid dehydrogenase small subunit [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|167011391|sp|A1JQN9.1|DADA_YERE8 RecName: Full=D-amino acid dehydrogenase small subunit
gi|122089493|emb|CAL12341.1| D-amino acid dehydrogenase small subunit [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 434
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 44/308 (14%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL--MVGEDSRAAFL 228
+Q G+L + RT ++ + + L +AG+ L++ L EP L + + + L
Sbjct: 133 RQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTADQLATVEPALAKVAHKLTGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + K A + ++ V LL G+ A + +
Sbjct: 193 PNDETGDCKLFTERLAK----MAEQAGVKFIFNRSVEKLLVD---GDQIAGVLWGDDIIK 245
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
A VVA G +S +L+ L+ IPV P KG+ L + N ++++
Sbjct: 246 ADAYVVAFGAYSTALLAGLV-------SIPVYPLKGYSLTIPITNPAGAPYSTV------ 292
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
+ I++T D I +G + GFNT++EQ + + +
Sbjct: 293 ------------LDETYKIAITRFDDRI---RVGGMAEIVGFNTQLEQARRETLEMVVGD 337
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
YP ++ A F + GLRP PDG P++G L ++L TGH LG ++A G+
Sbjct: 338 LYPDGGNISQATFWT------GLRPMTPDGTPIVGRT-SLKNLYLNTGHGTLGWTMACGS 390
Query: 469 AELVADMV 476
+L+AD++
Sbjct: 391 GQLLADIM 398
>gi|170723711|ref|YP_001751399.1| glycine oxidase ThiO [Pseudomonas putida W619]
gi|169761714|gb|ACA75030.1| glycine oxidase ThiO [Pseudomonas putida W619]
Length = 365
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V VQT+ L + +V++AG WSG DLLR I ++PV+P KG +++ F
Sbjct: 183 VTGVQTADGVLQADD-VVLSAGAWSG----DLLRTLGI--ELPVEPVKGQMIL---FKCA 232
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+ SM +L+ A G++++GS+ + AG++
Sbjct: 233 EDFLPSM---------------------VLAKGRYAIPRRDGHILVGSTLEHAGYDKTPT 271
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
Q + + AAE P+L D + + GLRP P+G P IG VPG ++L
Sbjct: 272 QDALASLKASAAELLPELADATVVAHWA------GLRPGSPEGIPYIGQVPGHDGLWLNC 325
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L D++ +D AP+A GR
Sbjct: 326 GHYRNGLVLAPASCQLFTDLLTGVEPIIDPAPYAPAGR 363
>gi|420574074|ref|ZP_15069135.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-06]
gi|391446470|gb|EIR06509.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-06]
Length = 402
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 175/440 (39%), Gaps = 91/440 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQ------GYI--WMVHRTP 135
V+I+G+G++G+T A L V V+D+ + T AG GY W P
Sbjct: 3 VVILGSGVVGVTSA-WYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKMLA----------------------DSLRD 159
I W LA+R + +W+ML D L+D
Sbjct: 62 LKAIKWMFQRHAPLAIRLDGSSLQLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLKD 121
Query: 160 -QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL- 217
+ +Q G +Q G+L + RT ++ + + L +AG+ L++ L EP L
Sbjct: 122 LRAATGIQYEG-RQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTAEQLATVEPALA 180
Query: 218 -MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
+ + + LP D D L + K A + ++ V LL G+
Sbjct: 181 KVAHKLTGGLRLPNDETGDCKLFTERLAK----MAEQAGVKFIFNRSVDKLL---VEGDQ 233
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
A + + A VVA G +S +L+ L+ IPV P KG+ L +
Sbjct: 234 IAGVLCGDDIIKADAYVVAFGAYSTALLAGLV-------SIPVYPLKGYSLTIP------ 280
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
D P + I++T D I +G + GFNT++
Sbjct: 281 ------------ITDPASAPFSTVLDETYKIAITRFDDRI---RVGGMAEIVGFNTQLAP 325
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + YP D+ A F S GLRP PDG P++G P L ++L TG
Sbjct: 326 ARRETLEMVVRDLYPHGGDISQAVFWS------GLRPMTPDGTPIVGRTP-LKNLYLNTG 378
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG ++A G+ +L+AD++
Sbjct: 379 HGTLGWTMACGSGQLLADII 398
>gi|420595246|ref|ZP_15088274.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-10]
gi|391474623|gb|EIR31898.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-10]
Length = 418
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 175/440 (39%), Gaps = 91/440 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQ------GYI--WMVHRTP 135
V+I+G+G++G+T A L V V+D+ + T AG GY W P
Sbjct: 3 VVILGSGVVGVTSA-WYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKMLA----------------------DSLRD 159
I W LA+R + +W+ML D L+D
Sbjct: 62 LKAIKWMFQRHAPLAIRLDGSSLQLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLKD 121
Query: 160 -QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL- 217
+ +Q G +Q G+L + RT ++ + + L +AG+ L++ L EP L
Sbjct: 122 LRAATGIQYEG-RQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTAEQLATVEPALA 180
Query: 218 -MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
+ + + LP D D L + K A + ++ V LL G+
Sbjct: 181 KVAHKLTGGLRLPNDETGDCKLFTERLAK----MAEQAGVKFIFNRSVDKLL---VEGDQ 233
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
A + + A VVA G +S +L+ L+ IPV P KG+ L +
Sbjct: 234 IAGVLCGDDIIKADAYVVAFGAYSTALLAGLV-------SIPVYPLKGYSLTIP------ 280
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
D P + I++T D I +G + GFNT++
Sbjct: 281 ------------ITDPASAPFSTVLDETYKIAITRFDDRI---RVGGMAEIVGFNTQLAP 325
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + YP D+ A F S GLRP PDG P++G P L ++L TG
Sbjct: 326 ARRETLEMVVRDLYPHGGDISQAVFWS------GLRPMTPDGTPIVGRTP-LKNLYLNTG 378
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG ++A G+ +L+AD++
Sbjct: 379 HGTLGWTMACGSGQLLADII 398
>gi|423017443|ref|ZP_17008164.1| D-amino acid dehydrogenase small subunit [Achromobacter
xylosoxidans AXX-A]
gi|338779524|gb|EGP43963.1| D-amino acid dehydrogenase small subunit [Achromobacter
xylosoxidans AXX-A]
Length = 433
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 126/309 (40%), Gaps = 43/309 (13%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+ G+L + RT ++ + + L E G+ E L + L+ AEP L A L
Sbjct: 133 RARGTLQLFRTEAQMEAARRDIAVLEEVGVPYELLDRNRLVTAEPALARSLHKLAGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYS 288
P D D L + + + RY + PV L + + G+V V+ L +
Sbjct: 193 PNDETGDCRLFTTRLAEMAAALGVEFRY----NQPVAGL--NTAGGQVTGVRVGNEVLTA 246
Query: 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG 348
+ V A G ++ + L LD+PV P KG+ L +
Sbjct: 247 DR-YVAAFGSYTRGFLEPL------GLDLPVYPVKGYSLTIP------------------ 281
Query: 349 HHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAE 408
D P + I++T D I +G + +GF+ ++ + +
Sbjct: 282 MKDEAAAPVSTILDETYKIAVTRFDDRI---RVGGMAELSGFDLRLKDARRKTLELVVND 338
Query: 409 FYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGT 468
+P D+ A+F + GLRP PD PV+GP +FL TGH LG ++A G+
Sbjct: 339 LFPGSGDVARAEFWT------GLRPMTPDSTPVVGPTR-YGNLFLNTGHGTLGWTMACGS 391
Query: 469 AELVADMVL 477
+LVAD VL
Sbjct: 392 GKLVADQVL 400
>gi|449134569|ref|ZP_21770064.1| glycine oxidase ThiO [Rhodopirellula europaea 6C]
gi|448886764|gb|EMB17158.1| glycine oxidase ThiO [Rhodopirellula europaea 6C]
Length = 404
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 171/424 (40%), Gaps = 66/424 (15%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD-L 142
+++G G IGL+IA +L+ + V V+D+ G + A G + + ++ D L
Sbjct: 22 TLVVGGGAIGLSIAWELVRRGE-KVTVIDRGPIAHGTSWAAAGILPPANFDRATDPIDRL 80
Query: 143 ALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR 201
S+ LW + L DQ G+DP G + G + T E L + + +
Sbjct: 81 RGFSHTLWPLWCKQLLDQTGIDP----GLIRCGGYYLAETAGEASALTGMMSYWDDLAVE 136
Query: 202 AEYLSSSDLLQAEPEL----------MVGEDSRAAFLPYD-----SQLDAMLAVAYIEKG 246
+ + ++LL+ +P L DS A + P + S+L LA A +G
Sbjct: 137 CQRIELTELLRRQPRLTEWSQTNPWIQSHPDSAAWWTPDEYQIRPSRLLTALATACQSQG 196
Query: 247 NRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHD 306
+ E D C R+ + VE ++L S++ I+ G
Sbjct: 197 VQ-LLPHTTILELSSDNSGCTARTLTRDAVE------HSLRSERTILCGGAAIGGIC--- 246
Query: 307 LLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILS 366
E+ L+ V P +G +L+L H D P +N G
Sbjct: 247 ----PEVRLESSVIPIRGQILLL-------------------HSDTFTDPIVLNVGNRY- 282
Query: 367 ISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRK 426
+ A D GN+++GS + GF +I + A P+L+ +A S
Sbjct: 283 --LVARGD--GNVLVGSCEEEVGFEQGTTDDVIQGLRSFANRVCPELKSATVASQWS--- 335
Query: 427 VRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSA 486
G RP DG P+IG VP +F+A GH G+ LA GTA +AD++ ++ +
Sbjct: 336 ---GHRPMTFDGFPMIGRVPDQRNLFVAGGHYRSGIHLASGTAVAMADVIEGKQSFMEMS 392
Query: 487 PFAV 490
F+V
Sbjct: 393 DFSV 396
>gi|420821763|ref|ZP_15289507.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-96]
gi|391697691|gb|EIT30061.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-96]
Length = 421
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 175/440 (39%), Gaps = 91/440 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQ------GYI--WMVHRTP 135
V+I+G+G++G+T A L V V+D+ + T AG GY W P
Sbjct: 3 VVILGSGVVGVTSA-WYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKMLA----------------------DSLRD 159
I W LA+R + +W+ML D L+D
Sbjct: 62 LKAIKWMFQRHAPLAIRLDGSSLQLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLKD 121
Query: 160 -QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL- 217
+ +Q G +Q G+L + RT ++ + + L +AG+ L++ L EP L
Sbjct: 122 LRAATGIQYEG-RQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTAEQLATVEPALA 180
Query: 218 -MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
+ + + LP D D L + K A + ++ V LL G+
Sbjct: 181 KVAHKLTGGLRLPNDETGDCKLFTERLAK----MAEQAGVKFIFNRSVDKLL---VEGDQ 233
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
A + + A VVA G +S +L+ L+ IPV P KG+ L +
Sbjct: 234 IAGVLCGDDIIKADAYVVAFGAYSTALLAGLV-------SIPVYPLKGYSLTIP------ 280
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
D P + I++T D I +G + GFNT++
Sbjct: 281 ------------ITDPASAPFSTVLDETYKIAITRFDDRI---RVGGMAEIVGFNTQLAP 325
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + YP D+ A F S GLRP PDG P++G P L ++L TG
Sbjct: 326 ARRETLEMVVRDLYPHGGDISQAVFWS------GLRPMTPDGTPIVGRTP-LKNLYLNTG 378
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG ++A G+ +L+AD++
Sbjct: 379 HGTLGWTMACGSGQLLADII 398
>gi|422223980|ref|ZP_16383804.1| D-amino acid dehydrogenase, small subunit [Pseudomonas avellanae
BPIC 631]
gi|407992784|gb|EKG34339.1| D-amino acid dehydrogenase, small subunit [Pseudomonas avellanae
BPIC 631]
Length = 433
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 171/451 (37%), Gaps = 92/451 (20%)
Query: 84 VIIIGAGIIGLTIA--------------RQLLVGSDLSVAVVDKVVPCSGATGAGQG--- 126
V+++G+G+IG T A RQ VG + S A +V P + A G
Sbjct: 3 VLVLGSGVIGTTSAYYLARAGFQVTVVDRQPAVGMETSFANAGQVSPGYASPWAAPGVPL 62
Query: 127 -----------------------YIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLD 163
Y+WM A+ ++ + L++ RD LD
Sbjct: 63 KAIKWLLQRHSPLAIKATADIDQYLWMAQMLRNCTASRYAVNKERMVR-LSEYSRD-CLD 120
Query: 164 PLQV---IGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL- 217
L++ I + + G+ + RT +L + + L ++G+ E L + + + EP L
Sbjct: 121 ELRIETGIAYEGRSLGTTQLFRTQAQLDNAAKDIAVLEQSGVPYELLDRAGIARVEPALA 180
Query: 218 -MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
+ G S A LP D D L + + + RY + + R G+
Sbjct: 181 GVTGILSGALRLPNDQTGDCQLFTTRLAEMAVELGVEFRYGQ-------NIERLEHAGDT 233
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
L + V+A G +S L+ L + PV P KG+ L + N
Sbjct: 234 VTGVWIDGVLETADRYVLALGSYSPQLLKPL------GIKAPVYPLKGYSLTVPITN--- 284
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISM-TATTDVIGNLVLGSSRQFAGFNTEVE 395
P IL + A T + +G + AGF+ +
Sbjct: 285 -------------------PAMAPTSTILDETYKVAITRFDNRIRIGGMAEIAGFDLSLN 325
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+ + + YP+ DL A F + GLRP PDG P++G P L +FL T
Sbjct: 326 PRRRETLEMIVGDLYPQGGDLSQASFWT------GLRPTTPDGTPIVGATP-LRNLFLNT 378
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSA 486
GH LG ++A G+ L+AD++ ++ +A
Sbjct: 379 GHGTLGWTMACGSGRLLADLIARKTPQISAA 409
>gi|420810919|ref|ZP_15279743.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-94]
gi|391682639|gb|EIT16500.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-94]
Length = 424
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 175/440 (39%), Gaps = 91/440 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQ------GYI--WMVHRTP 135
V+I+G+G++G+T A L V V+D+ + T AG GY W P
Sbjct: 3 VVILGSGVVGVTSA-WYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKMLA----------------------DSLRD 159
I W LA+R + +W+ML D L+D
Sbjct: 62 LKAIKWMFQRHAPLAIRLDGSSLQLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLKD 121
Query: 160 -QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL- 217
+ +Q G +Q G+L + RT ++ + + L +AG+ L++ L EP L
Sbjct: 122 LRAATGIQYEG-RQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTAEQLATVEPALA 180
Query: 218 -MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
+ + + LP D D L + K A + ++ V LL G+
Sbjct: 181 KVAHKLTGGLRLPNDETGDCKLFTERLAK----MAEQAGVKFIFNRSVDKLL---VEGDQ 233
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
A + + A VVA G +S +L+ L+ IPV P KG+ L +
Sbjct: 234 IAGVLCGDDIIKADAYVVAFGAYSTALLAGLV-------SIPVYPLKGYSLTIP------ 280
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
D P + I++T D I +G + GFNT++
Sbjct: 281 ------------ITDPASAPFSTVLDETYKIAITRFDDRI---RVGGMAEIVGFNTQLAP 325
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + YP D+ A F S GLRP PDG P++G P L ++L TG
Sbjct: 326 ARRETLEMVVRDLYPHGGDISQAVFWS------GLRPMTPDGTPIVGRTP-LKNLYLNTG 378
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG ++A G+ +L+AD++
Sbjct: 379 HGTLGWTMACGSGQLLADII 398
>gi|422651193|ref|ZP_16713991.1| D-amino acid dehydrogenase small subunit [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330964274|gb|EGH64534.1| D-amino acid dehydrogenase small subunit [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 433
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 171/451 (37%), Gaps = 92/451 (20%)
Query: 84 VIIIGAGIIGLTIA--------------RQLLVGSDLSVAVVDKVVPCSGATGAGQG--- 126
V+++G+G+IG T A RQ VG + S A +V P + A G
Sbjct: 3 VLVLGSGVIGTTSAYYLARAGFQVTVVDRQPAVGMETSFANAGQVSPGYASPWAAPGVPL 62
Query: 127 -----------------------YIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLD 163
Y+WM A+ ++ + L++ RD LD
Sbjct: 63 KAIKWLLQRHSPLAIKATANIDQYLWMAQMLRNCTASRYAVNKERMVR-LSEYSRD-CLD 120
Query: 164 PLQV---IGW--KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL- 217
L++ I + + G+ + RT +L + + L ++G+ E L + + + EP L
Sbjct: 121 ELRIETGIAYEGRSLGTTQLFRTQAQLDNAAKDIAVLEQSGVPYELLDRAGIARVEPALA 180
Query: 218 -MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
+ G S A LP D D L + + + RY + + R G+
Sbjct: 181 GVTGILSGALRLPNDQTGDCQLFTTRLAEMAVELGVEFRYGQ-------NIERLEHAGDT 233
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
L + V+A G +S L+ L + PV P KG+ L + N
Sbjct: 234 VTGVWIDGVLETADRYVLALGSYSPQLLKPL------GIKAPVYPLKGYSLTVPITN--- 284
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISM-TATTDVIGNLVLGSSRQFAGFNTEVE 395
P IL + A T + +G + AGF+ +
Sbjct: 285 -------------------PAMAPTSTILDETYKVAITRFDNRIRIGGMAEIAGFDLSLN 325
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
+ + + YP+ DL A F + GLRP PDG P++G P L +FL T
Sbjct: 326 PRRRETLEMIVGDLYPQGGDLSQASFWT------GLRPTTPDGTPIVGATP-LRNLFLNT 378
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSA 486
GH LG ++A G+ L+AD++ ++ +A
Sbjct: 379 GHGTLGWTMACGSGRLLADLIARKTPQISAA 409
>gi|237801861|ref|ZP_04590322.1| FAD-binding oxidoreductase [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331024719|gb|EGI04775.1| FAD-binding oxidoreductase [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 367
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 37/218 (16%)
Query: 276 VEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSL 335
V V T T+ + +++AAG WSG L+ L L++PV+P KG +++ + +
Sbjct: 184 VSGVSTLAGTVTGDR-VILAAGAWSGKLLKTL------GLELPVEPVKGQMILYKCASDF 236
Query: 336 KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVE 395
+SM +L+ A G++++GS+ + GF+
Sbjct: 237 L---SSM---------------------VLAKGRYAIPRRDGHILIGSTLEHEGFDKTTT 272
Query: 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLAT 455
Q ++ + A E P+L + A + GLRP P+G P IGP+ ++L
Sbjct: 273 QAALESLKASAIELLPELAN---AQPVFQWA---GLRPGSPEGIPFIGPLADFDGLWLNC 326
Query: 456 GHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGR 493
GH GL LA + +L+ D++L +D AP+A GR
Sbjct: 327 GHYRNGLVLAPASCQLLTDLLLGRKPIIDPAPYAAAGR 364
>gi|329940967|ref|ZP_08290247.1| oxidoreductase [Streptomyces griseoaurantiacus M045]
gi|329300261|gb|EGG44159.1| oxidoreductase [Streptomyces griseoaurantiacus M045]
Length = 397
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 177/412 (42%), Gaps = 52/412 (12%)
Query: 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IW 140
DV+++G G+IGL A + G LSV VVD P GA G + V E +
Sbjct: 17 DVLVVGGGLIGLVTAWRA-AGRGLSVTVVDPE-PGGGAARVAAGMLAAVTELHHGEQTLL 74
Query: 141 DLALRSNKLWKMLADSLRD-QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
L L S + + A L + G D +G+++ G+L + ++ L+E +G
Sbjct: 75 ALNLESARRYPDFAAELTEATGHD----LGYRRCGTLAVALDTDDRAHLRELHALQQRSG 130
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAF-LPYDSQLDAM-LAVAYIEKGNRHFASKGR-Y 256
L +++LS + + EP L G R + D Q+D LA A + R R +
Sbjct: 131 LSSQWLSGRECRRLEPLLAPG--VRGGLRVDGDHQIDPRRLAAALLVACERAGVVFHRAW 188
Query: 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316
AE L +TG V T T + +V+AAG SG L E VL
Sbjct: 189 AERL-----TLAGDRATG----VLTGGGTALTAGQVVLAAGSASGRLAG----VPEDVLP 235
Query: 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI 376
PV+P KG ++ L + V + L P +
Sbjct: 236 -PVRPVKGQVVRLTVPRRYAPFLSRTVRAVVRGSHVYLVPRE-----------------N 277
Query: 377 GNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP 436
G LVLG++ + G++T V + + + A E P + +L L + ++ GLRP P
Sbjct: 278 GELVLGATSEELGWDTTVTAGGVYELLRDAHELVPGITELPLTETLA------GLRPGSP 331
Query: 437 DGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPF 488
D P++GP GL + LATGH G+ L T + +AD++ T L ++ PF
Sbjct: 332 DNAPLLGPT-GLPGLLLATGHYRNGVLLTPVTGDAMADVLTTGELPPEALPF 382
>gi|420669892|ref|ZP_15155359.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-45]
gi|420778840|ref|ZP_15251035.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-88]
gi|420800212|ref|ZP_15270077.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-92]
gi|391542046|gb|EIR92542.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-45]
gi|391654503|gb|EIS91334.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-88]
gi|391681859|gb|EIT15783.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-92]
Length = 423
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 175/440 (39%), Gaps = 91/440 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQ------GYI--WMVHRTP 135
V+I+G+G++G+T A L V V+D+ + T AG GY W P
Sbjct: 3 VVILGSGVVGVTSA-WYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKMLA----------------------DSLRD 159
I W LA+R + +W+ML D L+D
Sbjct: 62 LKAIKWMFQRHAPLAIRLDGSSLQLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLKD 121
Query: 160 -QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL- 217
+ +Q G +Q G+L + RT ++ + + L +AG+ L++ L EP L
Sbjct: 122 LRAATGIQYEG-RQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTAEQLATVEPALA 180
Query: 218 -MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
+ + + LP D D L + K A + ++ V LL G+
Sbjct: 181 KVAHKLTGGLRLPNDETGDCKLFTERLAK----MAEQAGVKFIFNRSVDKLL---VEGDQ 233
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
A + + A VVA G +S +L+ L+ IPV P KG+ L +
Sbjct: 234 IAGVLCGDDIIKADAYVVAFGAYSTALLAGLV-------SIPVYPLKGYSLTIP------ 280
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
D P + I++T D I +G + GFNT++
Sbjct: 281 ------------ITDPASAPFSTVLDETYKIAITRFDDRI---RVGGMAEIVGFNTQLAP 325
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + YP D+ A F S GLRP PDG P++G P L ++L TG
Sbjct: 326 ARRETLEMVVRDLYPHGGDISQAVFWS------GLRPMTPDGTPIVGRTP-LKNLYLNTG 378
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG ++A G+ +L+AD++
Sbjct: 379 HGTLGWTMACGSGQLLADII 398
>gi|209546904|ref|YP_002278822.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209538148|gb|ACI58082.1| FAD dependent oxidoreductase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 416
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 173/459 (37%), Gaps = 103/459 (22%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSE--IW- 140
V+++GAGIIG+ IA +L +V +VD+ P GA+ I + P S IW
Sbjct: 8 VVVVGAGIIGVVIAHELQRRGQ-TVVLVDRATPGMGASYGNMASIAVTEFMPASRPRIWA 66
Query: 141 -----------DLALRSNKLWKMLADSLRDQGLD-PLQVIGWKQTGSLLIGRTPEELVML 188
+ +R L K++ LR P ++ + G++L GR E+L L
Sbjct: 67 QMPKWLLHPEGPVRIRPGYLPKLVPWFLRFLAASRPSKLRELEAAGAVLCGRVYEDLDAL 126
Query: 189 ----------------------------KERVKQLCEAGLRAEYLSSSDLLQAEPELM-- 218
+E + L G R E L + + EP L
Sbjct: 127 LKGTGLTQMLTADGCLSLYTDEAEFRADREHIDILERFGFRHEILGGNAIRDLEPALTTR 186
Query: 219 VGE-----DSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST 273
+G+ D+R+ PY L VA EK A GR E D V T
Sbjct: 187 IGKAVLFPDNRSITDPYK------LVVALAEKFQ---ALGGRIVE--GDVVG--FEQVET 233
Query: 274 GEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFN 333
G V A++ + + +V+AAG ++ L +
Sbjct: 234 G-VSALRLADGRTLAADKVVLAAGAFTARL-----------------------------S 263
Query: 334 SLKLNHASMEAGYVGHHDLTLHPG-QVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNT 392
+L H +E G+H + PG + H I T + +G + + AG +
Sbjct: 264 ALLPEHIPLETER-GYHTQIMDPGISMRHSIIWPARAFMVTPTACGIRVGGTVEMAGLDA 322
Query: 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVF 452
+ + KRA E P L +++ G RP +PD PV+GP V+
Sbjct: 323 PPDYRRAKILVKRAREALPDLVPRSATEWM-------GHRPALPDTVPVMGPSAKRRNVW 375
Query: 453 LATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491
ATGH LGL+ A T L+AD++ VD P+ V
Sbjct: 376 YATGHGHLGLTYAATTGRLMADLITGVEPPVDMKPYRVD 414
>gi|170024341|ref|YP_001720846.1| D-amino acid dehydrogenase small subunit [Yersinia
pseudotuberculosis YPIII]
gi|226722406|sp|B1JLH4.1|DADA_YERPY RecName: Full=D-amino acid dehydrogenase small subunit
gi|169750875|gb|ACA68393.1| D-amino-acid dehydrogenase [Yersinia pseudotuberculosis YPIII]
Length = 434
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 175/440 (39%), Gaps = 91/440 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQ------GYI--WMVHRTP 135
V+I+G+G++G+T A L V V+D+ + T AG GY W P
Sbjct: 3 VVILGSGVVGVTSA-WYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKMLA----------------------DSLRD 159
I W LA+R + +W+ML D L+D
Sbjct: 62 LKAIKWMFQRHAPLAIRLDGSSLQLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLKD 121
Query: 160 -QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL- 217
+ +Q G +Q G+L + RT ++ + + L +AG+ L++ L EP L
Sbjct: 122 LRAATGIQYEG-RQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTAEQLATVEPALA 180
Query: 218 -MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
+ + + LP D D L + K A + ++ V LL G+
Sbjct: 181 KVAHKLTGGLRLPNDETGDCKLFTERLAK----MAEQAGVKFIFNRSVDKLL---VEGDQ 233
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
A + + A VVA G +S +L+ L+ IPV P KG+ L +
Sbjct: 234 IAGVLCGDDIIKADAYVVAFGAYSTALLAGLV-------SIPVYPLKGYSLTIPI----- 281
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
D P + I++T D I +G + GFNT++
Sbjct: 282 -------------TDPASAPFSTVLDETYKIAITRFDDRI---RVGGMAEIVGFNTQLAP 325
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + YP D+ A F S GLRP PDG P++G P L ++L TG
Sbjct: 326 ARRETLEMVVRDLYPHGGDISQAVFWS------GLRPMTPDGTPIVGRTP-LKNLYLNTG 378
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG ++A G+ +L+AD++
Sbjct: 379 HGTLGWTMACGSGQLLADII 398
>gi|238502531|ref|XP_002382499.1| N,N-dimethylglycine oxidase [Aspergillus flavus NRRL3357]
gi|220691309|gb|EED47657.1| N,N-dimethylglycine oxidase [Aspergillus flavus NRRL3357]
Length = 396
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 165/408 (40%), Gaps = 68/408 (16%)
Query: 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV-PCSGATGAGQGYIWMVHRTPGSEI 139
T D+ I+GAGI+G +A L +D V ++D+ G+TG G++ +
Sbjct: 7 TADIAIVGAGIVGSALA-YFLSQTDKRVVLIDRSFSELKGSTGHAPGFVGQFNE------ 59
Query: 140 WDLALRSNKLWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAG 199
S L ++ +++ + P G+ G L I + E + L+ R + AG
Sbjct: 60 ------SEVLTRLAIETVGEYTKVPG---GFDVVGGLEIATSCEGVARLRSRCEMAKRAG 110
Query: 200 LRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEF 259
L AE +SS PEL+ ++ A + P D +A+ + H ++ R E
Sbjct: 111 LSAELISSGQATSLAPELVNDDNQIALYFPGDGAANAIRITTFY-----HENARARGVEL 165
Query: 260 YHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPV 319
VT + ++N G V V T+ + +KK +++A G W+ +L + + IP+
Sbjct: 166 IEAEVTEVQQAN--GCVNGVMTTSGLIPAKK-VIIATGIWATNL-------CKFDIPIPI 215
Query: 320 KPRKGHLLVLENFNSLKLNHA-----SMEAGYVGHHDLTLHPGQVNHGQILSISM-TATT 373
P H + ++ KL A Y H G +H + + TA
Sbjct: 216 VP-VAHPYMYGEHHAPKLRKAPWVRWPQHHVYARDHGTFFGLGSYDHAPVFNEPRDTAIG 274
Query: 374 DVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP 433
D IG QF D +A F P+ L R+ G+
Sbjct: 275 DWIG--------QF------------DETLSQAMRFIPEETQLV------PRERFNGIFS 308
Query: 434 YMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPL 481
PD P++G +P + +++A + ++ A G A+ +A ++ P+
Sbjct: 309 MTPDNMPLVGSIPSIEGLYMAA---AVWVTHAAGAAKFLAQILEDQPV 353
>gi|392548237|ref|ZP_10295374.1| D-amino-acid dehydrogenase [Pseudoalteromonas rubra ATCC 29570]
Length = 421
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 136/313 (43%), Gaps = 49/313 (15%)
Query: 183 EELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAY 242
E++ L+++ +Q G+ E L+ + L EP G D R + + +Q+
Sbjct: 149 EQIRALQQKYQQ---QGVAVELLNRTQLFALEP----GLDQRVQYALFFTQVGHTPDPYQ 201
Query: 243 IEKG-NRHF-ASKGRYAEFYHDPVTCLLRSNSTGEVEAVQ--TSKNTLYSKKAIVVAAGC 298
+ + R F A G + + D +T L ++ ++ T + ++ + +VVA G
Sbjct: 202 LSQTLFRQFTALGGTFVKAKVDKITPLNTDAKQPQLAKIKVTTQSHGCHTFERLVVATGA 261
Query: 299 WSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQ 358
WS +L T++ +P++ +G+ +L ++L AS + ++
Sbjct: 262 WSKTLC------TQLGYKLPIEAERGYHNMLPIASNLSRPVASADRQFI----------- 304
Query: 359 VNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCL 418
T + G L L + +FAG +T+ ++RA R L
Sbjct: 305 -------------MTPMQGGLRLAGTVEFAGLDTQPN-------YERADMLLTHARALLE 344
Query: 419 -ADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477
+D + + +G RP +PD PVIG P +F A GH+ LGL+ A T+EL+A +
Sbjct: 345 GSDTLVQGEHWMGPRPSLPDSLPVIGQAPDHPNIFFALGHQHLGLTQAAITSELIAQCIA 404
Query: 478 TNPLKVDSAPFAV 490
P +D P+++
Sbjct: 405 NQPTTLDIGPYSI 417
>gi|420606341|ref|ZP_15098205.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-12]
gi|420697111|ref|ZP_15179672.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-53]
gi|420826859|ref|ZP_15294072.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-98]
gi|391476893|gb|EIR33973.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-12]
gi|391571221|gb|EIS18600.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-53]
gi|391699040|gb|EIT31270.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-98]
Length = 430
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 175/440 (39%), Gaps = 91/440 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQ------GYI--WMVHRTP 135
V+I+G+G++G+T A L V V+D+ + T AG GY W P
Sbjct: 3 VVILGSGVVGVTSA-WYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKMLA----------------------DSLRD 159
I W LA+R + +W+ML D L+D
Sbjct: 62 LKAIKWMFQRHAPLAIRLDGSSLQLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLKD 121
Query: 160 -QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL- 217
+ +Q G +Q G+L + RT ++ + + L +AG+ L++ L EP L
Sbjct: 122 LRAATGIQYEG-RQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTAEQLATVEPALA 180
Query: 218 -MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
+ + + LP D D L + K A + ++ V LL G+
Sbjct: 181 KVAHKLTGGLRLPNDETGDCKLFTERLAK----MAEQAGVKFIFNRSVDKLL---VEGDQ 233
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
A + + A VVA G +S +L+ L+ IPV P KG+ L +
Sbjct: 234 IAGVLCGDDIIKADAYVVAFGAYSTALLAGLV-------SIPVYPLKGYSLTIP------ 280
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
D P + I++T D I +G + GFNT++
Sbjct: 281 ------------ITDPASAPFSTVLDETYKIAITRFDDRI---RVGGMAEIVGFNTQLAP 325
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + YP D+ A F S GLRP PDG P++G P L ++L TG
Sbjct: 326 ARRETLEMVVRDLYPHGGDISQAVFWS------GLRPMTPDGTPIVGRTP-LKNLYLNTG 378
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG ++A G+ +L+AD++
Sbjct: 379 HGTLGWTMACGSGQLLADII 398
>gi|423553423|ref|ZP_17529750.1| glycine oxidase ThiO [Bacillus cereus ISP3191]
gi|401184244|gb|EJQ91351.1| glycine oxidase ThiO [Bacillus cereus ISP3191]
Length = 369
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 173/407 (42%), Gaps = 65/407 (15%)
Query: 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWM-VHRTPGS 137
C +DV IIG G+IG ++A L VA+V+K S A+ A G + +
Sbjct: 2 CKKYDVAIIGGGVIGSSVA-HFLAERGHKVAIVEKQQIASEASKAAAGLLGVQAEWDEYD 60
Query: 138 EIWDLALRSNKLWKMLADSLRDQ-GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLC 196
++DLA S ++ LA+ LR++ G+D IG+++ G I + +E KER+ +
Sbjct: 61 PLFDLARESRAIFPQLAEVLREKTGID----IGYEEKGIYRIAQNEDE----KERILHIM 112
Query: 197 E----AGLRAEYLSSSDLLQAEP---ELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRH 249
+ G + +L+ L + EP E ++G A + P D + A + K H
Sbjct: 113 DWQQKTGEDSYFLTGDRLREKEPYLSESIIG----AVYYPKDGHVIA----PELTKAFAH 164
Query: 250 FASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLR 309
AS A+ Y +R + +V + TS+ + +K +V+A G WS L+ R
Sbjct: 165 SASFSG-ADIYEQTEVFDIRIENN-KVTGIVTSEGMITCEK-VVIAGGSWSTKLLGYFHR 221
Query: 310 ETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM 369
E P KG ++ + + L E Y+ P +
Sbjct: 222 EW------GTYPVKGEVVAVRSRKPLLKAPIFQERFYIA-------PKRG---------- 258
Query: 370 TATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRI 429
G V+G++ + FN V+ I I +RA P L++ A++ S
Sbjct: 259 -------GRYVIGATMKPRTFNKTVQPESITSILERAYTILPALKE---AEWES---AWA 305
Query: 430 GLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476
GLRP P +G + ++ TGH G+ L+ + + +AD++
Sbjct: 306 GLRPQSNHEAPYMGEHEEIKGLYACTGHYRNGILLSPVSGQYMADLI 352
>gi|420746422|ref|ZP_15222741.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-64]
gi|391620107|gb|EIS61297.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-64]
Length = 398
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 175/440 (39%), Gaps = 91/440 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQ------GYI--WMVHRTP 135
V+I+G+G++G+T A L V V+D+ + T AG GY W P
Sbjct: 3 VVILGSGVVGVTSA-WYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKMLA----------------------DSLRD 159
I W LA+R + +W+ML D L+D
Sbjct: 62 LKAIKWMFQRHAPLAIRLDGSSLQLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLKD 121
Query: 160 -QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL- 217
+ +Q G +Q G+L + RT ++ + + L +AG+ L++ L EP L
Sbjct: 122 LRAATGIQYEG-RQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTAEQLATVEPALA 180
Query: 218 -MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
+ + + LP D D L + K A + ++ V LL G+
Sbjct: 181 KVAHKLTGGLRLPNDETGDCKLFTERLAK----MAEQAGVKFIFNRSVDKLLVE---GDQ 233
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
A + + A VVA G +S +L+ L+ IPV P KG+ L +
Sbjct: 234 IAGVLCGDDIIKADAYVVAFGAYSTALLAGLV-------SIPVYPLKGYSLTIP------ 280
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
D P + I++T D I +G + GFNT++
Sbjct: 281 ------------ITDPASAPFSTVLDETYKIAITRFDDRI---RVGGMAEIVGFNTQLAP 325
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + YP D+ A F S GLRP PDG P++G P L ++L TG
Sbjct: 326 ARRETLEMVVRDLYPHGGDISQAVFWS------GLRPMTPDGTPIVGRTP-LKNLYLNTG 378
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG ++A G+ +L+AD++
Sbjct: 379 HGTLGWTMACGSGQLLADII 398
>gi|420611714|ref|ZP_15103047.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-13]
gi|420735410|ref|ZP_15213048.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-61]
gi|420795161|ref|ZP_15265541.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-91]
gi|391490549|gb|EIR46191.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-13]
gi|391614569|gb|EIS56420.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-61]
gi|391670693|gb|EIT05707.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-91]
Length = 422
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 175/440 (39%), Gaps = 91/440 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQ------GYI--WMVHRTP 135
V+I+G+G++G+T A L V V+D+ + T AG GY W P
Sbjct: 3 VVILGSGVVGVTSA-WYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKMLA----------------------DSLRD 159
I W LA+R + +W+ML D L+D
Sbjct: 62 LKAIKWMFQRHAPLAIRLDGSSLQLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLKD 121
Query: 160 -QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL- 217
+ +Q G +Q G+L + RT ++ + + L +AG+ L++ L EP L
Sbjct: 122 LRAATGIQYEG-RQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTAEQLATVEPALA 180
Query: 218 -MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
+ + + LP D D L + K A + ++ V LL G+
Sbjct: 181 KVAHKLTGGLRLPNDETGDCKLFTERLAK----MAEQAGVKFIFNRSVDKLL---VEGDQ 233
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
A + + A VVA G +S +L+ L+ IPV P KG+ L +
Sbjct: 234 IAGVLCGDDIIKADAYVVAFGAYSTALLAGLV-------SIPVYPLKGYSLTIP------ 280
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
D P + I++T D I +G + GFNT++
Sbjct: 281 ------------ITDPASAPFSTVLDETYKIAITRFDDRI---RVGGMAEIVGFNTQLAP 325
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + YP D+ A F S GLRP PDG P++G P L ++L TG
Sbjct: 326 ARRETLEMVVRDLYPHGGDISQAVFWS------GLRPMTPDGTPIVGRTP-LKNLYLNTG 378
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG ++A G+ +L+AD++
Sbjct: 379 HGTLGWTMACGSGQLLADII 398
>gi|300692096|ref|YP_003753091.1| D-amino acid dehydrogenase subunit [Ralstonia solanacearum PSI07]
gi|299079156|emb|CBJ51824.1| D-amino acid dehydrogenase subunit [Ralstonia solanacearum PSI07]
Length = 429
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 128/310 (41%), Gaps = 48/310 (15%)
Query: 171 KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAA--FL 228
+Q G+L + RT ++L + L AG+ E LS DL+++EP L A L
Sbjct: 133 RQQGTLQVFRTQQQLDGAANDIAVLERAGVPYELLSRDDLVRSEPGLAATRHKLAGGLRL 192
Query: 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS--KNTL 286
P D D L ++ + R+ + + L+ N +AV+ +
Sbjct: 193 PNDETGDCQLFTTHLAAMAEKLGVRFRF----NSHINSLIMQN-----DAVRGALVDGEA 243
Query: 287 YSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGY 346
S +VVA G +S + +L+ +PV P KG +
Sbjct: 244 ISADLVVVAMGSYSTPFLKNLV-------GVPVYPLKGFSIT------------------ 278
Query: 347 VGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQTIIDRIWKRA 406
V D P + +++T D I +G Q G++ ++ +
Sbjct: 279 VPMTDAERSPVSTVLDETYKVAITRFDDRI---RVGGMAQIVGYDKRLDPGKRKTLEFVV 335
Query: 407 AEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLAL 466
+ +P D+ A F + GLRP PDG P++GP P + ++L TGH LG ++A
Sbjct: 336 NDLFPGGGDVSRATFWA------GLRPMTPDGTPIVGPTP-VRGLWLNTGHGTLGWTMAC 388
Query: 467 GTAELVADMV 476
G+ +L++D+V
Sbjct: 389 GSGQLLSDLV 398
>gi|22126062|ref|NP_669485.1| D-amino acid dehydrogenase small subunit [Yersinia pestis KIM10+]
gi|45441749|ref|NP_993288.1| D-amino acid dehydrogenase small subunit [Yersinia pestis biovar
Microtus str. 91001]
gi|51596400|ref|YP_070591.1| D-amino acid dehydrogenase small subunit [Yersinia
pseudotuberculosis IP 32953]
gi|108807501|ref|YP_651417.1| D-amino acid dehydrogenase small subunit [Yersinia pestis Antiqua]
gi|108811777|ref|YP_647544.1| D-amino acid dehydrogenase small subunit [Yersinia pestis Nepal516]
gi|149365929|ref|ZP_01887964.1| D-amino acid dehydrogenase small subunit [Yersinia pestis
CA88-4125]
gi|153949627|ref|YP_001400970.1| D-amino acid dehydrogenase small subunit [Yersinia
pseudotuberculosis IP 31758]
gi|162418342|ref|YP_001606788.1| D-amino acid dehydrogenase small subunit [Yersinia pestis Angola]
gi|165927751|ref|ZP_02223583.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165939392|ref|ZP_02227940.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis biovar
Orientalis str. IP275]
gi|166009350|ref|ZP_02230248.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166210888|ref|ZP_02236923.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167401502|ref|ZP_02306999.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167420374|ref|ZP_02312127.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167426555|ref|ZP_02318308.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167469586|ref|ZP_02334290.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis FV-1]
gi|186895444|ref|YP_001872556.1| D-amino acid dehydrogenase small subunit [Yersinia
pseudotuberculosis PB1/+]
gi|218929248|ref|YP_002347123.1| D-amino acid dehydrogenase small subunit [Yersinia pestis CO92]
gi|229894821|ref|ZP_04510001.1| D-amino acid dehydrogenase [Yersinia pestis Pestoides A]
gi|229897565|ref|ZP_04512721.1| D-amino acid dehydrogenase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229898210|ref|ZP_04513358.1| D-amino acid dehydrogenase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902071|ref|ZP_04517192.1| D-amino acid dehydrogenase [Yersinia pestis Nepal516]
gi|270490750|ref|ZP_06207824.1| D-amino acid dehydrogenase small subunit [Yersinia pestis KIM D27]
gi|294503806|ref|YP_003567868.1| D-amino acid dehydrogenase small subunit [Yersinia pestis Z176003]
gi|384122478|ref|YP_005505098.1| D-amino acid dehydrogenase small subunit [Yersinia pestis D106004]
gi|384140024|ref|YP_005522726.1| D-amino acid dehydrogenase small subunit [Yersinia pestis A1122]
gi|384414672|ref|YP_005624034.1| D-amino acid dehydrogenase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|420547025|ref|ZP_15044954.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-01]
gi|420552355|ref|ZP_15049717.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-02]
gi|420563394|ref|ZP_15059454.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-04]
gi|420568417|ref|ZP_15064015.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-05]
gi|420579392|ref|ZP_15073964.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-07]
gi|420584727|ref|ZP_15078806.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-08]
gi|420589859|ref|ZP_15083422.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-09]
gi|420600880|ref|ZP_15093297.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-11]
gi|420617087|ref|ZP_15107770.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-14]
gi|420622405|ref|ZP_15112507.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-15]
gi|420627495|ref|ZP_15117120.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-16]
gi|420637811|ref|ZP_15126395.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-25]
gi|420643337|ref|ZP_15131411.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-29]
gi|420648563|ref|ZP_15136159.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-32]
gi|420659681|ref|ZP_15146152.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-36]
gi|420664995|ref|ZP_15150910.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-42]
gi|420680840|ref|ZP_15165297.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-47]
gi|420686125|ref|ZP_15170015.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-48]
gi|420691305|ref|ZP_15174588.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-52]
gi|420702694|ref|ZP_15184285.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-54]
gi|420708371|ref|ZP_15189087.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-55]
gi|420713781|ref|ZP_15193930.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-56]
gi|420719247|ref|ZP_15198678.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-58]
gi|420724770|ref|ZP_15203477.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-59]
gi|420730379|ref|ZP_15208493.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-60]
gi|420740885|ref|ZP_15217973.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-63]
gi|420763078|ref|ZP_15236923.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-71]
gi|420768265|ref|ZP_15241593.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-72]
gi|420773304|ref|ZP_15246134.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-76]
gi|420789661|ref|ZP_15260588.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-90]
gi|420805604|ref|ZP_15274950.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-93]
gi|420816476|ref|ZP_15284738.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-95]
gi|420832558|ref|ZP_15299221.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-99]
gi|420837426|ref|ZP_15303622.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-100]
gi|420842601|ref|ZP_15308312.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-101]
gi|420853763|ref|ZP_15318153.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-103]
gi|420859111|ref|ZP_15322781.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-113]
gi|421763638|ref|ZP_16200433.1| D-amino acid dehydrogenase small subunit [Yersinia pestis INS]
gi|20137831|sp|Q8ZEL7.1|DADA_YERPE RecName: Full=D-amino acid dehydrogenase small subunit
gi|81639407|sp|Q66AQ6.1|DADA_YERPS RecName: Full=D-amino acid dehydrogenase small subunit
gi|122979636|sp|Q1C7V0.1|DADA_YERPA RecName: Full=D-amino acid dehydrogenase small subunit
gi|123073422|sp|Q1CJ86.1|DADA_YERPN RecName: Full=D-amino acid dehydrogenase small subunit
gi|167011392|sp|A7FI92.1|DADA_YERP3 RecName: Full=D-amino acid dehydrogenase small subunit
gi|226722404|sp|B2K3Q3.1|DADA_YERPB RecName: Full=D-amino acid dehydrogenase small subunit
gi|226722405|sp|A9R9D3.1|DADA_YERPG RecName: Full=D-amino acid dehydrogenase small subunit
gi|21959016|gb|AAM85736.1|AE013821_2 D-amino acid dehydrogenase subunit [Yersinia pestis KIM10+]
gi|45436611|gb|AAS62165.1| D-amino acid dehydrogenase small subunit [Yersinia pestis biovar
Microtus str. 91001]
gi|51589682|emb|CAH21312.1| D-amino acid dehydrogenase small subunit [Yersinia
pseudotuberculosis IP 32953]
gi|108775425|gb|ABG17944.1| D-amino acid dehydrogenase small subunit [Yersinia pestis Nepal516]
gi|108779414|gb|ABG13472.1| D-amino acid dehydrogenase small subunit [Yersinia pestis Antiqua]
gi|115347859|emb|CAL20779.1| D-amino acid dehydrogenase small subunit [Yersinia pestis CO92]
gi|149292342|gb|EDM42416.1| D-amino acid dehydrogenase small subunit [Yersinia pestis
CA88-4125]
gi|152961122|gb|ABS48583.1| D-amino acid dehydrogenase, small subunit [Yersinia
pseudotuberculosis IP 31758]
gi|162351157|gb|ABX85105.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis Angola]
gi|165912733|gb|EDR31362.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis biovar
Orientalis str. IP275]
gi|165920365|gb|EDR37642.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165991905|gb|EDR44206.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166208068|gb|EDR52548.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166962069|gb|EDR58090.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167049198|gb|EDR60606.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167054431|gb|EDR64243.1| D-amino acid dehydrogenase, small subunit [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|186698470|gb|ACC89099.1| FAD dependent oxidoreductase [Yersinia pseudotuberculosis PB1/+]
gi|229680967|gb|EEO77062.1| D-amino acid dehydrogenase [Yersinia pestis Nepal516]
gi|229688776|gb|EEO80844.1| D-amino acid dehydrogenase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229693902|gb|EEO83951.1| D-amino acid dehydrogenase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229702294|gb|EEO90313.1| D-amino acid dehydrogenase [Yersinia pestis Pestoides A]
gi|262362074|gb|ACY58795.1| D-amino acid dehydrogenase small subunit [Yersinia pestis D106004]
gi|270339254|gb|EFA50031.1| D-amino acid dehydrogenase small subunit [Yersinia pestis KIM D27]
gi|294354265|gb|ADE64606.1| D-amino acid dehydrogenase small subunit [Yersinia pestis Z176003]
gi|320015176|gb|ADV98747.1| D-amino acid dehydrogenase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342855153|gb|AEL73706.1| D-amino acid dehydrogenase small subunit [Yersinia pestis A1122]
gi|391426062|gb|EIQ88279.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-01]
gi|391427727|gb|EIQ89786.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-02]
gi|391441429|gb|EIR01918.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-04]
gi|391443186|gb|EIR03526.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-05]
gi|391458602|gb|EIR17451.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-07]
gi|391459608|gb|EIR18373.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-08]
gi|391461769|gb|EIR20353.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-09]
gi|391476471|gb|EIR33585.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-11]
gi|391491703|gb|EIR47233.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-15]
gi|391493764|gb|EIR49075.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-14]
gi|391506140|gb|EIR60088.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-16]
gi|391511517|gb|EIR64923.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-25]
gi|391521864|gb|EIR74297.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-29]
gi|391525463|gb|EIR77604.1| pyridine nucleotide-disulfide oxidoreductase family protein,
partial [Yersinia pestis PY-32]
gi|391537493|gb|EIR88383.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-36]
gi|391540144|gb|EIR90804.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-42]
gi|391555792|gb|EIS04929.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-47]
gi|391557038|gb|EIS06070.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-48]
gi|391570572|gb|EIS18023.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-52]
gi|391578956|gb|EIS25144.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-54]
gi|391583705|gb|EIS29334.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-55]
gi|391586819|gb|EIS32074.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-56]
gi|391598536|gb|EIS42245.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-58]
gi|391599927|gb|EIS43498.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-60]
gi|391601826|gb|EIS45198.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-59]
gi|391615206|gb|EIS56996.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-63]
gi|391638063|gb|EIS76910.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-71]
gi|391640513|gb|EIS79052.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-72]
gi|391650087|gb|EIS87405.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-76]
gi|391663065|gb|EIS98944.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-90]
gi|391680464|gb|EIT14506.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-93]
gi|391694300|gb|EIT26972.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-95]
gi|391709274|gb|EIT40466.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-99]
gi|391715080|gb|EIT45657.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-100]
gi|391715716|gb|EIT46226.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-101]
gi|391729634|gb|EIT58602.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-103]
gi|391734775|gb|EIT63004.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Yersinia pestis PY-113]
gi|411176539|gb|EKS46559.1| D-amino acid dehydrogenase small subunit [Yersinia pestis INS]
Length = 434
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 175/440 (39%), Gaps = 91/440 (20%)
Query: 84 VIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQ------GYI--WMVHRTP 135
V+I+G+G++G+T A L V V+D+ + T AG GY W P
Sbjct: 3 VVILGSGVVGVTSA-WYLAKEGHDVTVIDRQDGPAQETSAGNAGQISPGYAAPWAAPGVP 61
Query: 136 GSEI-W------DLALRSNK-------LWKMLA----------------------DSLRD 159
I W LA+R + +W+ML D L+D
Sbjct: 62 LKAIKWMFQRHAPLAIRLDGSSLQLRWMWQMLRNCDTSHYMVNKSRMVRLAEYSRDCLKD 121
Query: 160 -QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPEL- 217
+ +Q G +Q G+L + RT ++ + + L +AG+ L++ L EP L
Sbjct: 122 LRAATGIQYEG-RQGGTLQLFRTEQQFDNAAKDIAVLDDAGVPYSLLTAEQLATVEPALA 180
Query: 218 -MVGEDSRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV 276
+ + + LP D D L + K A + ++ V LL G+
Sbjct: 181 KVAHKLTGGLRLPNDETGDCKLFTERLAK----MAEQAGVKFIFNRSVDKLL---VEGDQ 233
Query: 277 EAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLK 336
A + + A VVA G +S +L+ L+ IPV P KG+ L +
Sbjct: 234 IAGVLCGDDIIKADAYVVAFGAYSTALLAGLV-------SIPVYPLKGYSLTIPI----- 281
Query: 337 LNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQ 396
D P + I++T D I +G + GFNT++
Sbjct: 282 -------------TDPASAPFSTVLDETYKIAITRFDDRI---RVGGMAEIVGFNTQLAP 325
Query: 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456
+ + + YP D+ A F S GLRP PDG P++G P L ++L TG
Sbjct: 326 ARRETLEMVVRDLYPHGGDISQAVFWS------GLRPMTPDGTPIVGRTP-LKNLYLNTG 378
Query: 457 HEGLGLSLALGTAELVADMV 476
H LG ++A G+ +L+AD++
Sbjct: 379 HGTLGWTMACGSGQLLADII 398
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,756,311,753
Number of Sequences: 23463169
Number of extensions: 327663692
Number of successful extensions: 989319
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2298
Number of HSP's successfully gapped in prelim test: 5641
Number of HSP's that attempted gapping in prelim test: 974687
Number of HSP's gapped (non-prelim): 13913
length of query: 495
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 348
effective length of database: 8,910,109,524
effective search space: 3100718114352
effective search space used: 3100718114352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)