Query 011027
Match_columns 495
No_of_seqs 249 out of 2815
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 19:17:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011027.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011027hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pvc_A TRNA 5-methylaminomethy 100.0 3E-54 1E-58 463.5 36.6 416 16-494 204-667 (689)
2 3ps9_A TRNA 5-methylaminomethy 100.0 1.2E-53 4E-58 458.6 35.1 415 16-494 212-663 (676)
3 1y56_B Sarcosine oxidase; dehy 100.0 1.6E-46 5.3E-51 377.1 37.6 361 81-494 5-370 (382)
4 3nyc_A D-arginine dehydrogenas 100.0 6.1E-47 2.1E-51 379.7 33.9 361 81-494 9-380 (381)
5 2gf3_A MSOX, monomeric sarcosi 100.0 1.3E-44 4.6E-49 363.8 35.5 367 81-494 3-379 (389)
6 2gag_B Heterotetrameric sarcos 100.0 9.4E-44 3.2E-48 359.6 37.7 362 81-494 21-390 (405)
7 1ryi_A Glycine oxidase; flavop 100.0 2E-44 6.7E-49 361.7 30.1 360 80-494 16-378 (382)
8 2uzz_A N-methyl-L-tryptophan o 100.0 3E-43 1E-47 351.8 32.6 362 81-494 2-372 (372)
9 3axb_A Putative oxidoreductase 100.0 1.7E-43 5.9E-48 362.5 28.9 368 81-494 23-442 (448)
10 2oln_A NIKD protein; flavoprot 100.0 5.2E-42 1.8E-46 346.0 36.3 366 81-494 4-389 (397)
11 3dme_A Conserved exported prot 100.0 1.5E-40 5.3E-45 331.4 34.2 350 81-477 4-368 (369)
12 1pj5_A N,N-dimethylglycine oxi 100.0 1.3E-39 4.3E-44 357.1 37.2 367 81-494 4-394 (830)
13 3dje_A Fructosyl amine: oxygen 100.0 7E-39 2.4E-43 327.3 32.6 359 81-491 6-396 (438)
14 3g3e_A D-amino-acid oxidase; F 100.0 7.8E-39 2.7E-43 317.3 16.0 335 82-493 1-347 (351)
15 1c0p_A D-amino acid oxidase; a 100.0 2.3E-36 8E-41 300.9 22.8 319 79-479 4-357 (363)
16 3c4n_A Uncharacterized protein 100.0 3E-36 1E-40 304.3 21.5 327 81-480 36-398 (405)
17 2rgh_A Alpha-glycerophosphate 100.0 5.2E-32 1.8E-36 283.8 37.7 348 81-478 32-410 (571)
18 2qcu_A Aerobic glycerol-3-phos 100.0 3.8E-32 1.3E-36 281.4 32.4 347 81-480 3-373 (501)
19 3da1_A Glycerol-3-phosphate de 100.0 4.8E-30 1.6E-34 268.4 28.0 346 81-477 18-389 (561)
20 3cgv_A Geranylgeranyl reductas 99.7 1.7E-15 5.8E-20 151.8 22.1 203 231-477 96-312 (397)
21 3nix_A Flavoprotein/dehydrogen 99.6 1.4E-14 4.9E-19 146.3 19.2 209 231-477 100-323 (421)
22 3ka7_A Oxidoreductase; structu 99.6 1.1E-13 3.9E-18 139.9 22.4 71 224-304 186-257 (425)
23 3i3l_A Alkylhalidase CMLS; fla 99.6 6.5E-14 2.2E-18 146.6 18.8 71 229-306 120-193 (591)
24 1qo8_A Flavocytochrome C3 fuma 99.5 3.4E-13 1.1E-17 141.4 18.4 182 80-301 120-313 (566)
25 2weu_A Tryptophan 5-halogenase 99.5 5.9E-13 2E-17 138.0 16.9 202 230-478 166-374 (511)
26 1y0p_A Fumarate reductase flav 99.5 1.1E-12 3.7E-17 137.7 18.5 182 81-301 126-318 (571)
27 3atr_A Conserved archaeal prot 99.5 5.3E-12 1.8E-16 128.7 23.2 64 232-301 95-163 (453)
28 3oz2_A Digeranylgeranylglycero 99.5 6.6E-11 2.3E-15 117.9 30.0 63 233-301 98-163 (397)
29 2bs2_A Quinol-fumarate reducta 99.4 2.8E-12 9.4E-17 135.7 17.8 188 81-302 5-222 (660)
30 3rp8_A Flavoprotein monooxygen 99.4 5E-12 1.7E-16 127.1 19.0 61 232-301 122-182 (407)
31 4at0_A 3-ketosteroid-delta4-5a 99.4 2.2E-13 7.6E-18 141.0 9.2 193 80-301 40-265 (510)
32 2i0z_A NAD(FAD)-utilizing dehy 99.4 2.1E-12 7.1E-17 131.4 13.4 167 80-300 25-191 (447)
33 3nks_A Protoporphyrinogen oxid 99.4 5.5E-12 1.9E-16 129.5 16.6 228 225-479 225-473 (477)
34 3ihg_A RDME; flavoenzyme, anth 99.4 5.3E-12 1.8E-16 131.5 16.2 70 232-307 115-189 (535)
35 3nrn_A Uncharacterized protein 99.4 6.4E-12 2.2E-16 126.9 16.2 66 224-301 179-244 (421)
36 3i6d_A Protoporphyrinogen oxid 99.4 2.4E-11 8.2E-16 124.3 20.5 216 237-478 235-466 (470)
37 2gmh_A Electron transfer flavo 99.4 3.3E-11 1.1E-15 126.4 21.8 64 233-301 140-218 (584)
38 2x3n_A Probable FAD-dependent 99.4 8.7E-12 3E-16 124.9 16.4 64 232-301 102-167 (399)
39 3lov_A Protoporphyrinogen oxid 99.4 6.6E-12 2.3E-16 128.8 15.3 218 237-483 236-468 (475)
40 2h88_A Succinate dehydrogenase 99.3 1.6E-11 5.4E-16 129.0 17.5 186 81-302 18-219 (621)
41 2aqj_A Tryptophan halogenase, 99.3 4E-11 1.4E-15 124.9 20.2 69 228-302 156-224 (538)
42 1d4d_A Flavocytochrome C fumar 99.3 2.9E-11 9.9E-16 126.6 19.1 184 81-301 126-318 (572)
43 4dgk_A Phytoene dehydrogenase; 99.3 4E-12 1.4E-16 131.4 12.4 68 224-300 211-278 (501)
44 3fmw_A Oxygenase; mithramycin, 99.3 3E-11 1E-15 126.2 18.8 69 231-307 142-213 (570)
45 3v76_A Flavoprotein; structura 99.3 6.1E-12 2.1E-16 126.3 12.4 59 234-300 129-187 (417)
46 3nlc_A Uncharacterized protein 99.3 2.9E-11 9.9E-16 124.8 17.5 71 229-305 212-282 (549)
47 2wdq_A Succinate dehydrogenase 99.3 4E-11 1.4E-15 125.7 18.8 187 81-302 7-208 (588)
48 1chu_A Protein (L-aspartate ox 99.3 1.5E-11 5E-16 127.8 12.6 182 81-302 8-210 (540)
49 1kf6_A Fumarate reductase flav 99.3 1.5E-10 5.1E-15 121.6 19.7 183 81-302 5-199 (602)
50 3e1t_A Halogenase; flavoprotei 99.3 4.4E-11 1.5E-15 123.8 15.3 64 232-301 106-173 (512)
51 2e5v_A L-aspartate oxidase; ar 99.2 2E-10 7E-15 117.3 18.9 171 83-301 1-177 (472)
52 2e4g_A Tryptophan halogenase; 99.2 1E-10 3.6E-15 122.0 16.9 67 231-303 188-255 (550)
53 2qa2_A CABE, polyketide oxygen 99.2 6.7E-10 2.3E-14 114.3 22.4 62 233-301 103-167 (499)
54 1rp0_A ARA6, thiazole biosynth 99.2 1.5E-10 5.2E-15 110.2 15.9 40 81-121 39-79 (284)
55 2gqf_A Hypothetical protein HI 99.2 3.9E-11 1.3E-15 119.9 11.7 61 235-300 107-168 (401)
56 2qa1_A PGAE, polyketide oxygen 99.2 1.6E-09 5.6E-14 111.4 23.1 62 233-301 102-166 (500)
57 1jnr_A Adenylylsulfate reducta 99.2 6.2E-10 2.1E-14 118.0 18.7 176 80-302 21-220 (643)
58 1yvv_A Amine oxidase, flavin-c 99.1 1.4E-08 4.7E-13 98.9 24.4 36 81-117 2-37 (336)
59 3gyx_A Adenylylsulfate reducta 99.1 3.2E-10 1.1E-14 119.8 13.4 183 80-301 21-234 (662)
60 3ces_A MNMG, tRNA uridine 5-ca 99.1 1.1E-09 3.7E-14 114.0 15.4 61 233-300 120-181 (651)
61 3k7m_X 6-hydroxy-L-nicotine ox 99.1 4.3E-09 1.5E-13 106.3 19.4 39 82-121 2-40 (431)
62 3p1w_A Rabgdi protein; GDI RAB 99.1 1.5E-10 5E-15 117.1 8.2 67 225-299 247-313 (475)
63 2zxi_A TRNA uridine 5-carboxym 99.1 1.7E-09 6E-14 112.1 15.8 62 233-300 119-180 (637)
64 3qj4_A Renalase; FAD/NAD(P)-bi 99.0 1.2E-09 4.1E-14 106.9 12.8 211 238-478 113-340 (342)
65 1k0i_A P-hydroxybenzoate hydro 99.0 1.1E-09 3.6E-14 109.5 12.0 61 235-301 101-164 (394)
66 2pyx_A Tryptophan halogenase; 99.0 4E-09 1.4E-13 109.4 16.7 66 231-302 169-235 (526)
67 2dkh_A 3-hydroxybenzoate hydro 99.0 3.6E-08 1.2E-12 104.5 24.2 67 233-301 137-212 (639)
68 3cp8_A TRNA uridine 5-carboxym 99.0 3.3E-09 1.1E-13 110.3 14.7 63 233-301 113-175 (641)
69 3jsk_A Cypbp37 protein; octame 99.0 4.9E-09 1.7E-13 101.0 14.6 38 81-118 79-117 (344)
70 2ivd_A PPO, PPOX, protoporphyr 99.0 5E-09 1.7E-13 107.4 15.4 226 224-479 228-472 (478)
71 2bcg_G Secretory pathway GDP d 99.0 1E-08 3.5E-13 104.2 17.4 68 228-303 236-303 (453)
72 4a9w_A Monooxygenase; baeyer-v 99.0 3.1E-09 1E-13 104.2 12.6 60 235-302 74-134 (357)
73 3qvp_A Glucose oxidase; oxidor 99.0 7.7E-10 2.6E-14 115.1 8.3 36 80-115 18-53 (583)
74 2vou_A 2,6-dihydroxypyridine h 99.0 1.5E-08 5E-13 101.3 16.8 58 235-301 97-154 (397)
75 2gjc_A Thiazole biosynthetic e 98.9 9.5E-09 3.3E-13 98.4 14.2 38 81-119 65-104 (326)
76 3alj_A 2-methyl-3-hydroxypyrid 98.9 1.7E-08 5.9E-13 100.1 15.6 60 232-301 102-161 (379)
77 2cul_A Glucose-inhibited divis 98.9 1.3E-08 4.3E-13 93.8 13.4 61 235-302 66-127 (232)
78 2xdo_A TETX2 protein; tetracyc 98.9 2.9E-08 1E-12 99.1 15.8 60 233-301 124-183 (398)
79 3f8d_A Thioredoxin reductase ( 98.9 1.2E-08 4.1E-13 98.5 12.0 56 236-299 69-124 (323)
80 1d5t_A Guanine nucleotide diss 98.8 1.5E-07 5.3E-12 94.9 19.6 67 226-302 226-292 (433)
81 4gde_A UDP-galactopyranose mut 98.8 1.7E-08 5.7E-13 104.3 12.8 41 80-120 9-49 (513)
82 3itj_A Thioredoxin reductase 1 98.8 8.9E-09 3E-13 100.2 10.1 36 79-115 20-55 (338)
83 3fbs_A Oxidoreductase; structu 98.8 2E-08 6.8E-13 95.7 12.3 34 81-115 2-35 (297)
84 3ab1_A Ferredoxin--NADP reduct 98.8 3.5E-08 1.2E-12 97.0 13.5 60 235-300 72-131 (360)
85 4hb9_A Similarities with proba 98.8 2.4E-08 8.2E-13 99.9 12.2 43 257-301 125-167 (412)
86 3lzw_A Ferredoxin--NADP reduct 98.8 2.1E-08 7.3E-13 97.2 11.3 58 235-299 65-122 (332)
87 2zbw_A Thioredoxin reductase; 98.8 5.7E-08 1.9E-12 94.5 14.3 58 235-299 63-120 (335)
88 3vyw_A MNMC2; tRNA wobble urid 98.8 6.5E-10 2.2E-14 104.4 0.3 42 14-55 217-260 (308)
89 4gut_A Lysine-specific histone 98.8 2.3E-08 8E-13 107.5 12.2 38 81-119 336-373 (776)
90 1w4x_A Phenylacetone monooxyge 98.8 9.8E-09 3.4E-13 106.8 9.1 81 237-330 94-175 (542)
91 4fk1_A Putative thioredoxin re 98.8 3E-08 1E-12 95.1 11.9 35 81-116 6-40 (304)
92 1pn0_A Phenol 2-monooxygenase; 98.8 3E-07 1E-11 97.7 20.3 34 81-115 8-46 (665)
93 2vvm_A Monoamine oxidase N; FA 98.8 6.8E-08 2.3E-12 99.4 14.5 58 237-300 255-312 (495)
94 3fim_B ARYL-alcohol oxidase; A 98.8 3.9E-09 1.3E-13 109.6 4.9 35 81-115 2-36 (566)
95 2bry_A NEDD9 interacting prote 98.8 5.1E-08 1.7E-12 100.2 13.0 64 234-301 163-231 (497)
96 3c96_A Flavin-containing monoo 98.8 1.4E-07 4.7E-12 94.6 15.9 62 233-301 103-170 (410)
97 3o0h_A Glutathione reductase; 98.8 8.3E-08 2.8E-12 98.4 14.6 58 237-301 232-289 (484)
98 3q9t_A Choline dehydrogenase a 98.7 2.5E-08 8.5E-13 103.8 10.6 35 81-116 6-41 (577)
99 3t37_A Probable dehydrogenase; 98.7 1.5E-08 5.2E-13 105.1 8.2 35 81-115 17-51 (526)
100 3d1c_A Flavin-containing putat 98.7 2.7E-08 9.3E-13 98.1 9.6 61 233-301 84-144 (369)
101 3uox_A Otemo; baeyer-villiger 98.7 3.2E-08 1.1E-12 102.6 10.2 65 235-302 85-149 (545)
102 1fl2_A Alkyl hydroperoxide red 98.7 8.2E-08 2.8E-12 92.2 12.4 60 237-300 56-115 (310)
103 2jbv_A Choline oxidase; alcoho 98.7 2.6E-08 8.8E-13 103.5 9.2 36 81-116 13-48 (546)
104 3gwf_A Cyclohexanone monooxyge 98.7 7.8E-08 2.7E-12 99.7 12.8 66 234-302 84-149 (540)
105 2ywl_A Thioredoxin reductase r 98.7 1.4E-07 4.9E-12 82.8 12.7 62 235-306 54-115 (180)
106 2q0l_A TRXR, thioredoxin reduc 98.7 8.4E-08 2.9E-12 92.2 11.9 58 235-300 57-114 (311)
107 1mo9_A ORF3; nucleotide bindin 98.7 1.7E-07 6E-12 96.9 14.6 66 236-306 254-324 (523)
108 2gv8_A Monooxygenase; FMO, FAD 98.7 2.1E-07 7.1E-12 94.4 14.8 61 234-301 112-178 (447)
109 4ap3_A Steroid monooxygenase; 98.7 1.1E-07 3.7E-12 98.8 12.8 64 235-301 97-160 (549)
110 2r0c_A REBC; flavin adenine di 98.7 2.6E-07 8.9E-12 96.2 15.3 34 81-115 26-59 (549)
111 4dna_A Probable glutathione re 98.6 2.5E-07 8.5E-12 94.3 13.5 58 237-301 211-269 (463)
112 3cty_A Thioredoxin reductase; 98.6 1.7E-07 5.8E-12 90.4 11.5 35 80-115 15-49 (319)
113 2yg5_A Putrescine oxidase; oxi 98.6 1.1E-06 3.9E-11 89.1 17.4 39 81-120 5-43 (453)
114 2xve_A Flavin-containing monoo 98.6 2.3E-07 7.8E-12 94.5 12.2 65 233-302 97-168 (464)
115 1zk7_A HGII, reductase, mercur 98.6 8E-07 2.7E-11 90.6 15.8 58 236-301 215-272 (467)
116 3kkj_A Amine oxidase, flavin-c 98.6 3.4E-08 1.2E-12 92.6 5.2 36 81-117 2-37 (336)
117 3lxd_A FAD-dependent pyridine 98.6 4E-07 1.4E-11 91.4 13.2 65 236-306 193-258 (415)
118 1trb_A Thioredoxin reductase; 98.6 1.5E-06 5E-11 83.7 16.8 35 81-116 5-39 (320)
119 3fg2_P Putative rubredoxin red 98.6 7.1E-07 2.4E-11 89.2 14.8 65 236-306 183-248 (404)
120 4a5l_A Thioredoxin reductase; 98.6 4.2E-07 1.4E-11 87.3 12.3 35 81-116 4-38 (314)
121 1ges_A Glutathione reductase; 98.5 2.4E-06 8.1E-11 86.7 17.9 58 238-301 209-266 (450)
122 2q7v_A Thioredoxin reductase; 98.5 2.8E-07 9.6E-12 89.1 10.3 34 81-115 8-41 (325)
123 1vdc_A NTR, NADPH dependent th 98.5 1.6E-07 5.6E-12 91.1 8.6 58 235-301 68-125 (333)
124 1ju2_A HydroxynitrIle lyase; f 98.5 2.5E-07 8.5E-12 95.9 10.2 34 80-115 25-58 (536)
125 4dsg_A UDP-galactopyranose mut 98.5 8.3E-07 2.8E-11 90.8 13.5 38 81-119 9-47 (484)
126 2a87_A TRXR, TR, thioredoxin r 98.5 4.2E-07 1.4E-11 88.3 10.5 35 80-115 13-47 (335)
127 1v59_A Dihydrolipoamide dehydr 98.5 3.2E-07 1.1E-11 93.9 9.4 35 81-116 5-39 (478)
128 1kdg_A CDH, cellobiose dehydro 98.5 5.5E-07 1.9E-11 93.7 10.8 34 81-115 7-40 (546)
129 3k30_A Histamine dehydrogenase 98.5 8.9E-08 3E-12 102.5 4.8 39 80-119 390-428 (690)
130 1hyu_A AHPF, alkyl hydroperoxi 98.4 9.4E-07 3.2E-11 91.3 12.3 60 237-300 267-326 (521)
131 3lad_A Dihydrolipoamide dehydr 98.4 1.3E-06 4.5E-11 89.2 12.8 35 81-116 3-37 (476)
132 3s5w_A L-ornithine 5-monooxyge 98.4 8.2E-07 2.8E-11 90.4 11.1 35 81-116 30-69 (463)
133 1ojt_A Surface protein; redox- 98.4 4.5E-07 1.5E-11 92.9 9.1 36 80-116 5-40 (482)
134 2a8x_A Dihydrolipoyl dehydroge 98.4 1.2E-06 4E-11 89.3 12.0 33 81-114 3-35 (464)
135 1fec_A Trypanothione reductase 98.4 2.8E-06 9.5E-11 87.1 14.8 59 237-301 231-289 (490)
136 1n4w_A CHOD, cholesterol oxida 98.4 1E-06 3.5E-11 90.7 11.3 34 81-115 5-38 (504)
137 3urh_A Dihydrolipoyl dehydroge 98.4 2.1E-06 7.2E-11 88.1 13.4 36 80-116 24-59 (491)
138 1gpe_A Protein (glucose oxidas 98.4 6.6E-07 2.3E-11 93.6 9.7 36 80-115 23-58 (587)
139 3iwa_A FAD-dependent pyridine 98.4 3.5E-06 1.2E-10 86.0 14.9 63 237-306 202-265 (472)
140 1xdi_A RV3303C-LPDA; reductase 98.4 9.6E-07 3.3E-11 90.8 10.0 34 81-115 2-38 (499)
141 1dxl_A Dihydrolipoamide dehydr 98.4 3.9E-06 1.3E-10 85.5 14.5 35 81-116 6-40 (470)
142 3qfa_A Thioredoxin reductase 1 98.4 2.5E-06 8.5E-11 88.1 13.0 35 80-115 31-65 (519)
143 1ebd_A E3BD, dihydrolipoamide 98.4 2.2E-06 7.6E-11 87.0 12.5 33 81-114 3-35 (455)
144 3r9u_A Thioredoxin reductase; 98.3 1.8E-06 6.1E-11 82.7 10.7 34 81-115 4-38 (315)
145 2wpf_A Trypanothione reductase 98.3 4.3E-06 1.5E-10 85.8 13.6 58 238-301 236-293 (495)
146 3l8k_A Dihydrolipoyl dehydroge 98.3 3.1E-06 1.1E-10 86.2 12.1 35 81-116 4-38 (466)
147 3dgz_A Thioredoxin reductase 2 98.3 3E-06 1E-10 86.8 11.9 34 81-115 6-39 (488)
148 1y56_A Hypothetical protein PH 98.3 1.8E-06 6E-11 88.6 10.0 56 245-307 265-321 (493)
149 2qae_A Lipoamide, dihydrolipoy 98.3 2.2E-06 7.5E-11 87.4 10.3 35 81-116 2-36 (468)
150 2r9z_A Glutathione amide reduc 98.3 4E-06 1.4E-10 85.3 12.1 57 238-301 208-265 (463)
151 3oc4_A Oxidoreductase, pyridin 98.3 3.1E-06 1.1E-10 85.8 10.9 56 237-300 189-244 (452)
152 1q1r_A Putidaredoxin reductase 98.2 1.4E-05 4.9E-10 80.4 15.1 66 237-306 191-257 (431)
153 1zmd_A Dihydrolipoyl dehydroge 98.2 5.3E-06 1.8E-10 84.7 11.1 35 81-116 6-40 (474)
154 3dgh_A TRXR-1, thioredoxin red 98.2 7.7E-06 2.6E-10 83.7 12.3 33 81-114 9-41 (483)
155 3ef6_A Toluene 1,2-dioxygenase 98.2 5.5E-06 1.9E-10 82.8 11.0 63 237-306 185-248 (410)
156 2hqm_A GR, grase, glutathione 98.2 5.6E-06 1.9E-10 84.6 10.7 34 81-115 11-44 (479)
157 3fpz_A Thiazole biosynthetic e 98.2 1.2E-06 4.2E-11 84.7 5.5 39 81-119 65-104 (326)
158 2yqu_A 2-oxoglutarate dehydrog 98.2 7.6E-06 2.6E-10 83.0 11.5 33 82-115 2-34 (455)
159 2eq6_A Pyruvate dehydrogenase 98.2 9E-06 3.1E-10 82.7 11.6 34 81-115 6-39 (464)
160 4gcm_A TRXR, thioredoxin reduc 98.1 4.2E-06 1.4E-10 80.3 8.2 36 80-116 5-40 (312)
161 3sx6_A Sulfide-quinone reducta 98.1 3.4E-06 1.2E-10 85.1 7.5 35 81-115 4-40 (437)
162 4b1b_A TRXR, thioredoxin reduc 98.1 2.4E-05 8.1E-10 80.7 13.9 55 238-299 264-318 (542)
163 3klj_A NAD(FAD)-dependent dehy 98.1 2.4E-06 8.2E-11 84.6 5.3 34 81-115 9-42 (385)
164 2jae_A L-amino acid oxidase; o 98.1 3.2E-06 1.1E-10 86.6 5.9 39 81-120 11-49 (489)
165 1v0j_A UDP-galactopyranose mut 98.1 2.9E-06 9.8E-11 84.6 5.3 39 81-120 7-46 (399)
166 1s3e_A Amine oxidase [flavin-c 98.0 3.1E-06 1.1E-10 87.5 5.3 39 81-120 4-42 (520)
167 3kd9_A Coenzyme A disulfide re 98.0 1.5E-05 5E-10 80.8 9.8 35 81-115 3-38 (449)
168 2qy6_A UPF0209 protein YFCK; s 98.0 9.2E-07 3.1E-11 82.0 0.8 41 15-55 205-247 (257)
169 2e1m_A L-glutamate oxidase; L- 98.0 4.2E-06 1.4E-10 82.0 5.4 38 81-119 44-82 (376)
170 2b9w_A Putative aminooxidase; 98.0 4.9E-06 1.7E-10 83.6 6.0 38 81-119 6-44 (424)
171 3hdq_A UDP-galactopyranose mut 98.0 5.9E-06 2E-10 81.7 5.7 40 80-120 28-67 (397)
172 1rsg_A FMS1 protein; FAD bindi 98.0 3.7E-06 1.3E-10 86.8 4.4 39 81-120 8-47 (516)
173 3ntd_A FAD-dependent pyridine 97.9 6E-05 2E-09 78.6 13.2 65 237-306 192-274 (565)
174 1i8t_A UDP-galactopyranose mut 97.9 6.1E-06 2.1E-10 81.2 4.8 38 82-120 2-39 (367)
175 1sez_A Protoporphyrinogen oxid 97.9 7.3E-06 2.5E-10 84.3 5.5 38 81-119 13-50 (504)
176 3ihm_A Styrene monooxygenase A 97.9 5.7E-06 1.9E-10 83.3 4.1 35 80-115 21-55 (430)
177 2bc0_A NADH oxidase; flavoprot 97.9 6.8E-06 2.3E-10 84.2 4.0 34 81-115 35-71 (490)
178 2v3a_A Rubredoxin reductase; a 97.8 0.0001 3.4E-09 72.9 11.8 48 256-306 202-250 (384)
179 2bi7_A UDP-galactopyranose mut 97.8 1.6E-05 5.4E-10 78.7 5.4 38 81-119 3-40 (384)
180 3dk9_A Grase, GR, glutathione 97.8 1.5E-05 5.2E-10 81.3 4.7 36 80-116 19-54 (478)
181 3c4a_A Probable tryptophan hyd 97.7 1.5E-05 5E-10 78.9 4.1 34 82-116 1-36 (381)
182 2iid_A L-amino-acid oxidase; f 97.7 1.8E-05 6.2E-10 81.2 4.6 38 81-119 33-70 (498)
183 3pl8_A Pyranose 2-oxidase; sub 97.7 2.1E-05 7.1E-10 82.8 5.0 39 80-119 45-83 (623)
184 3vrd_B FCCB subunit, flavocyto 97.7 0.00017 5.9E-09 71.6 10.6 48 256-306 217-264 (401)
185 2vdc_G Glutamate synthase [NAD 97.6 5.9E-05 2E-09 76.3 6.2 36 81-117 122-157 (456)
186 3ic9_A Dihydrolipoamide dehydr 97.6 4.3E-05 1.5E-09 78.3 5.0 35 81-116 8-42 (492)
187 3g5s_A Methylenetetrahydrofola 97.6 4.6E-05 1.6E-09 74.0 4.8 33 82-115 2-34 (443)
188 4b63_A L-ornithine N5 monooxyg 97.6 0.00022 7.6E-09 73.1 10.0 57 238-298 146-212 (501)
189 1b37_A Protein (polyamine oxid 97.6 5.8E-05 2E-09 76.8 5.4 60 238-300 207-270 (472)
190 1onf_A GR, grase, glutathione 97.5 6.2E-05 2.1E-09 77.2 5.2 59 237-301 217-276 (500)
191 1nhp_A NADH peroxidase; oxidor 97.5 0.00057 2E-08 68.9 11.7 34 81-115 149-182 (447)
192 2eq6_A Pyruvate dehydrogenase 97.5 0.00053 1.8E-08 69.5 11.4 34 81-115 169-202 (464)
193 2yqu_A 2-oxoglutarate dehydrog 97.5 0.00064 2.2E-08 68.7 11.8 34 81-115 167-200 (455)
194 2xag_A Lysine-specific histone 97.4 0.00011 3.9E-09 79.5 6.1 37 81-118 278-314 (852)
195 2z3y_A Lysine-specific histone 97.4 9.6E-05 3.3E-09 78.5 5.4 36 81-117 107-142 (662)
196 1lvl_A Dihydrolipoamide dehydr 97.4 8.9E-05 3E-09 75.2 4.5 34 81-115 5-38 (458)
197 3h28_A Sulfide-quinone reducta 97.4 9.8E-05 3.4E-09 74.2 4.8 35 81-115 2-37 (430)
198 1o94_A Tmadh, trimethylamine d 97.4 0.00017 5.7E-09 77.5 6.4 36 81-117 389-424 (729)
199 3h8l_A NADH oxidase; membrane 97.3 0.00012 4.1E-09 73.0 4.0 59 237-306 218-276 (409)
200 1v59_A Dihydrolipoamide dehydr 97.3 0.0013 4.5E-08 66.9 11.8 34 81-115 183-216 (478)
201 2v3a_A Rubredoxin reductase; a 97.3 0.00019 6.6E-09 70.9 5.3 34 81-115 4-39 (384)
202 1coy_A Cholesterol oxidase; ox 97.3 0.00019 6.5E-09 73.7 5.1 35 80-115 10-44 (507)
203 1ps9_A 2,4-dienoyl-COA reducta 97.3 0.00025 8.7E-09 75.4 6.1 36 81-117 373-408 (671)
204 3gwf_A Cyclohexanone monooxyge 97.2 0.0041 1.4E-07 64.2 14.8 34 81-115 178-211 (540)
205 1m6i_A Programmed cell death p 97.2 0.00015 5.3E-09 74.1 3.9 64 236-306 225-289 (493)
206 3ics_A Coenzyme A-disulfide re 97.2 0.0002 6.8E-09 75.1 4.3 61 237-306 228-289 (588)
207 2x8g_A Thioredoxin glutathione 97.2 0.00031 1.1E-08 73.7 5.7 33 81-114 107-139 (598)
208 2cdu_A NADPH oxidase; flavoenz 97.2 0.0002 6.8E-09 72.4 3.9 58 237-301 191-248 (452)
209 2cdu_A NADPH oxidase; flavoenz 97.1 0.0052 1.8E-07 61.9 13.9 34 81-115 149-182 (452)
210 1xhc_A NADH oxidase /nitrite r 97.1 0.00031 1E-08 68.9 4.4 58 237-306 183-241 (367)
211 3ayj_A Pro-enzyme of L-phenyla 97.1 0.00019 6.5E-09 75.8 3.0 34 81-115 56-97 (721)
212 3cgb_A Pyridine nucleotide-dis 97.1 0.0033 1.1E-07 63.9 12.2 34 81-115 186-219 (480)
213 2gqw_A Ferredoxin reductase; f 97.1 0.00033 1.1E-08 69.8 4.4 60 236-306 186-246 (408)
214 3cgb_A Pyridine nucleotide-dis 97.1 0.00038 1.3E-08 71.0 4.7 57 237-301 227-283 (480)
215 1nhp_A NADH peroxidase; oxidor 97.0 0.00032 1.1E-08 70.8 3.9 57 237-301 191-247 (447)
216 1ebd_A E3BD, dihydrolipoamide 97.0 0.0025 8.7E-08 64.3 10.5 34 81-115 170-203 (455)
217 3uox_A Otemo; baeyer-villiger 97.0 0.0077 2.6E-07 62.2 14.2 34 81-115 185-218 (545)
218 1zmd_A Dihydrolipoyl dehydroge 97.0 0.0041 1.4E-07 63.1 12.0 34 81-115 178-211 (474)
219 2gag_A Heterotetrameric sarcos 97.0 0.0004 1.4E-08 76.9 4.6 38 81-119 128-165 (965)
220 1gte_A Dihydropyrimidine dehyd 97.0 0.00049 1.7E-08 76.7 5.4 38 81-119 187-225 (1025)
221 2gqw_A Ferredoxin reductase; f 97.0 0.0042 1.4E-07 61.7 11.7 34 81-115 145-178 (408)
222 1lqt_A FPRA; NADP+ derivative, 97.0 0.00042 1.5E-08 70.0 4.2 35 81-116 3-44 (456)
223 4ap3_A Steroid monooxygenase; 96.9 0.004 1.4E-07 64.4 11.3 34 81-115 191-224 (549)
224 4g6h_A Rotenone-insensitive NA 96.9 0.00052 1.8E-08 70.2 4.4 63 237-306 272-338 (502)
225 1cjc_A Protein (adrenodoxin re 96.9 0.0006 2.1E-08 68.9 4.6 35 81-116 6-42 (460)
226 2hqm_A GR, grase, glutathione 96.9 0.0077 2.6E-07 61.2 12.7 34 81-115 185-218 (479)
227 2bc0_A NADH oxidase; flavoprot 96.9 0.006 2E-07 62.2 11.6 34 81-115 194-227 (490)
228 3hyw_A Sulfide-quinone reducta 96.8 0.00068 2.3E-08 68.0 4.1 34 82-115 3-37 (430)
229 1xdi_A RV3303C-LPDA; reductase 96.8 0.0084 2.9E-07 61.2 11.8 34 81-115 182-215 (499)
230 2qae_A Lipoamide, dihydrolipoy 96.8 0.0074 2.5E-07 61.1 11.3 33 81-114 174-206 (468)
231 1vg0_A RAB proteins geranylger 96.7 0.0014 4.7E-08 68.4 5.8 65 225-296 369-433 (650)
232 1onf_A GR, grase, glutathione 96.7 0.013 4.3E-07 59.9 12.9 34 81-115 176-209 (500)
233 1ojt_A Surface protein; redox- 96.6 0.0089 3.1E-07 60.7 10.9 33 81-114 185-217 (482)
234 3ab1_A Ferredoxin--NADP reduct 96.6 0.0091 3.1E-07 58.0 10.0 34 81-115 163-196 (360)
235 3itj_A Thioredoxin reductase 1 96.5 0.011 3.8E-07 56.5 10.6 34 81-115 173-206 (338)
236 4eqs_A Coenzyme A disulfide re 96.4 0.0016 5.6E-08 65.3 3.5 52 238-300 189-240 (437)
237 2q0l_A TRXR, thioredoxin reduc 96.3 0.036 1.2E-06 52.3 12.2 34 81-115 143-176 (311)
238 3urh_A Dihydrolipoyl dehydroge 96.2 0.034 1.2E-06 56.6 12.4 34 81-115 198-231 (491)
239 1dxl_A Dihydrolipoamide dehydr 96.2 0.01 3.6E-07 60.0 8.3 34 81-115 177-210 (470)
240 3dgh_A TRXR-1, thioredoxin red 96.2 0.021 7.1E-07 58.0 10.5 32 82-114 188-219 (483)
241 3lad_A Dihydrolipoamide dehydr 96.1 0.031 1.1E-06 56.5 11.6 33 81-114 180-212 (476)
242 3ics_A Coenzyme A-disulfide re 96.1 0.031 1.1E-06 58.2 11.7 34 81-115 187-220 (588)
243 3s5w_A L-ornithine 5-monooxyge 96.0 0.023 8E-07 57.2 10.1 34 81-115 227-262 (463)
244 3r9u_A Thioredoxin reductase; 96.0 0.057 2E-06 50.9 12.0 33 81-114 147-179 (315)
245 3ado_A Lambda-crystallin; L-gu 95.8 0.0072 2.5E-07 57.4 4.5 32 82-114 7-38 (319)
246 3fwz_A Inner membrane protein 95.7 0.013 4.5E-07 48.4 5.5 33 81-114 7-39 (140)
247 3llv_A Exopolyphosphatase-rela 95.3 0.016 5.4E-07 47.9 4.6 32 82-114 7-38 (141)
248 1lss_A TRK system potassium up 95.2 0.017 5.9E-07 47.3 4.4 32 82-114 5-36 (140)
249 2g1u_A Hypothetical protein TM 95.1 0.02 6.9E-07 48.2 4.8 34 81-115 19-52 (155)
250 1w4x_A Phenylacetone monooxyge 95.1 0.16 5.5E-06 52.2 12.4 33 81-114 186-218 (542)
251 3ic5_A Putative saccharopine d 95.1 0.02 6.9E-07 45.3 4.4 32 82-114 6-38 (118)
252 1f0y_A HCDH, L-3-hydroxyacyl-C 95.1 0.02 6.7E-07 54.2 5.0 32 82-114 16-47 (302)
253 3k6j_A Protein F01G10.3, confi 94.9 0.037 1.3E-06 55.3 6.7 32 82-114 55-86 (460)
254 1id1_A Putative potassium chan 94.8 0.03 1E-06 47.0 5.0 33 81-114 3-35 (153)
255 4gcm_A TRXR, thioredoxin reduc 94.7 0.023 8E-07 53.8 4.6 33 82-115 146-178 (312)
256 3klj_A NAD(FAD)-dependent dehy 94.5 0.024 8.1E-07 55.7 4.1 33 82-115 147-179 (385)
257 4e12_A Diketoreductase; oxidor 94.5 0.034 1.2E-06 52.0 5.0 32 82-114 5-36 (283)
258 2dpo_A L-gulonate 3-dehydrogen 94.4 0.032 1.1E-06 53.1 4.6 32 82-114 7-38 (319)
259 4a5l_A Thioredoxin reductase; 94.3 0.039 1.3E-06 52.1 4.9 33 81-114 152-184 (314)
260 2hmt_A YUAA protein; RCK, KTN, 94.1 0.039 1.3E-06 45.3 4.0 32 82-114 7-38 (144)
261 1lvl_A Dihydrolipoamide dehydr 94.1 0.031 1E-06 56.3 3.8 34 81-115 171-204 (458)
262 3c85_A Putative glutathione-re 94.0 0.043 1.5E-06 47.5 4.2 33 81-114 39-72 (183)
263 3i83_A 2-dehydropantoate 2-red 93.9 0.045 1.5E-06 52.2 4.6 33 82-115 3-35 (320)
264 1xhc_A NADH oxidase /nitrite r 93.9 0.039 1.3E-06 53.8 4.2 33 82-115 144-176 (367)
265 1zej_A HBD-9, 3-hydroxyacyl-CO 93.8 0.056 1.9E-06 50.7 4.9 32 81-114 12-43 (293)
266 1ges_A Glutathione reductase; 93.6 0.054 1.8E-06 54.4 4.8 34 81-115 167-200 (450)
267 3hn2_A 2-dehydropantoate 2-red 93.6 0.046 1.6E-06 51.9 4.0 33 82-115 3-35 (312)
268 3l4b_C TRKA K+ channel protien 93.5 0.054 1.8E-06 48.4 4.0 31 83-114 2-32 (218)
269 2ewd_A Lactate dehydrogenase,; 93.5 0.058 2E-06 51.4 4.4 33 81-114 4-37 (317)
270 2y0c_A BCEC, UDP-glucose dehyd 93.4 0.06 2.1E-06 54.3 4.6 33 81-114 8-40 (478)
271 1zcj_A Peroxisomal bifunctiona 93.4 0.064 2.2E-06 54.0 4.8 32 82-114 38-69 (463)
272 3gg2_A Sugar dehydrogenase, UD 93.2 0.067 2.3E-06 53.6 4.6 32 82-114 3-34 (450)
273 2r9z_A Glutathione amide reduc 93.1 0.069 2.3E-06 53.8 4.6 33 82-115 167-199 (463)
274 3doj_A AT3G25530, dehydrogenas 93.1 0.088 3E-06 49.9 5.0 33 81-114 21-53 (310)
275 2raf_A Putative dinucleotide-b 93.0 0.085 2.9E-06 46.8 4.5 34 81-115 19-52 (209)
276 4a7p_A UDP-glucose dehydrogena 93.0 0.08 2.7E-06 52.8 4.7 34 81-115 8-41 (446)
277 1pzg_A LDH, lactate dehydrogen 93.0 0.082 2.8E-06 50.6 4.6 32 82-114 10-42 (331)
278 1lld_A L-lactate dehydrogenase 92.9 0.082 2.8E-06 50.3 4.6 32 82-114 8-41 (319)
279 3dtt_A NADP oxidoreductase; st 92.9 0.085 2.9E-06 48.1 4.5 33 81-114 19-51 (245)
280 3ghy_A Ketopantoate reductase 92.9 0.092 3.1E-06 50.4 4.9 32 82-114 4-35 (335)
281 3g17_A Similar to 2-dehydropan 92.9 0.059 2E-06 50.7 3.4 32 82-114 3-34 (294)
282 1ks9_A KPA reductase;, 2-dehyd 92.8 0.089 3E-06 49.1 4.6 32 83-115 2-33 (291)
283 3dfz_A SIRC, precorrin-2 dehyd 92.8 0.11 3.7E-06 46.5 4.9 33 81-114 31-63 (223)
284 3mog_A Probable 3-hydroxybutyr 92.8 0.087 3E-06 53.2 4.8 32 82-114 6-37 (483)
285 3k96_A Glycerol-3-phosphate de 92.8 0.11 3.8E-06 50.2 5.3 33 81-114 29-61 (356)
286 2hjr_A Malate dehydrogenase; m 92.8 0.095 3.3E-06 50.1 4.8 32 82-114 15-47 (328)
287 1vg0_A RAB proteins geranylger 92.7 0.24 8.4E-06 51.5 8.1 39 80-119 7-45 (650)
288 1z82_A Glycerol-3-phosphate de 92.5 0.1 3.4E-06 50.1 4.6 33 81-114 14-46 (335)
289 2ew2_A 2-dehydropantoate 2-red 92.5 0.097 3.3E-06 49.5 4.5 32 82-114 4-35 (316)
290 1t2d_A LDH-P, L-lactate dehydr 92.5 0.11 3.9E-06 49.4 4.9 32 82-114 5-37 (322)
291 1q1r_A Putidaredoxin reductase 92.4 0.099 3.4E-06 52.1 4.6 34 81-115 149-182 (431)
292 2a8x_A Dihydrolipoyl dehydroge 92.4 0.098 3.4E-06 52.6 4.6 34 81-115 171-204 (464)
293 3ic9_A Dihydrolipoamide dehydr 92.3 0.11 3.7E-06 52.8 4.8 34 81-115 174-207 (492)
294 3qha_A Putative oxidoreductase 92.3 0.1 3.5E-06 49.0 4.3 34 81-115 15-48 (296)
295 3g79_A NDP-N-acetyl-D-galactos 92.3 0.087 3E-06 53.0 3.9 34 81-115 18-53 (478)
296 2v6b_A L-LDH, L-lactate dehydr 92.2 0.13 4.3E-06 48.7 4.8 31 83-114 2-34 (304)
297 3vtf_A UDP-glucose 6-dehydroge 92.2 0.11 3.7E-06 51.5 4.5 33 81-114 21-53 (444)
298 4b1b_A TRXR, thioredoxin reduc 92.2 0.11 3.9E-06 53.2 4.7 33 81-114 223-255 (542)
299 3d1c_A Flavin-containing putat 92.1 0.1 3.6E-06 50.4 4.3 32 82-114 167-198 (369)
300 1kyq_A Met8P, siroheme biosynt 92.1 0.082 2.8E-06 48.9 3.2 33 81-114 13-45 (274)
301 4g65_A TRK system potassium up 92.0 0.09 3.1E-06 52.8 3.7 33 81-114 3-35 (461)
302 1bg6_A N-(1-D-carboxylethyl)-L 92.0 0.12 4.3E-06 49.8 4.6 32 82-114 5-36 (359)
303 3tl2_A Malate dehydrogenase; c 91.9 0.15 5E-06 48.4 4.9 33 81-114 8-41 (315)
304 1guz_A Malate dehydrogenase; o 91.9 0.15 5.1E-06 48.3 5.0 32 83-114 2-34 (310)
305 4eqs_A Coenzyme A disulfide re 91.9 0.1 3.6E-06 52.0 4.1 33 82-115 148-180 (437)
306 3ego_A Probable 2-dehydropanto 91.9 0.15 5E-06 48.3 4.9 31 82-114 3-33 (307)
307 1fl2_A Alkyl hydroperoxide red 91.9 0.14 4.7E-06 48.2 4.6 34 81-115 144-177 (310)
308 2wtb_A MFP2, fatty acid multif 91.9 0.14 4.7E-06 54.6 5.0 32 82-114 313-344 (725)
309 3g0o_A 3-hydroxyisobutyrate de 91.8 0.14 4.7E-06 48.3 4.6 33 81-114 7-39 (303)
310 3ef6_A Toluene 1,2-dioxygenase 91.8 0.13 4.4E-06 50.9 4.6 34 81-115 143-176 (410)
311 3pid_A UDP-glucose 6-dehydroge 91.8 0.14 4.8E-06 50.7 4.7 31 82-114 37-67 (432)
312 3hwr_A 2-dehydropantoate 2-red 91.8 0.13 4.6E-06 48.8 4.5 32 81-114 19-50 (318)
313 3pef_A 6-phosphogluconate dehy 91.7 0.15 5E-06 47.7 4.6 33 82-115 2-34 (287)
314 2x5o_A UDP-N-acetylmuramoylala 91.6 0.14 4.8E-06 51.1 4.6 34 82-116 6-39 (439)
315 3zwc_A Peroxisomal bifunctiona 91.6 0.23 8E-06 52.7 6.4 33 81-114 316-348 (742)
316 1jw9_B Molybdopterin biosynthe 91.6 0.12 4.2E-06 47.2 3.8 35 81-116 31-66 (249)
317 3kd9_A Coenzyme A disulfide re 91.6 0.13 4.6E-06 51.4 4.5 33 82-115 149-181 (449)
318 3e8x_A Putative NAD-dependent 91.4 0.17 5.8E-06 45.5 4.6 33 81-114 21-54 (236)
319 3oj0_A Glutr, glutamyl-tRNA re 91.4 0.091 3.1E-06 43.4 2.4 32 82-114 22-53 (144)
320 1vdc_A NTR, NADPH dependent th 91.3 0.16 5.4E-06 48.3 4.5 34 81-115 159-192 (333)
321 4dio_A NAD(P) transhydrogenase 91.3 0.17 6E-06 49.4 4.8 33 81-114 190-222 (405)
322 1mv8_A GMD, GDP-mannose 6-dehy 91.3 0.12 4.3E-06 51.4 3.9 31 83-114 2-32 (436)
323 1zk7_A HGII, reductase, mercur 91.3 0.15 5.2E-06 51.3 4.5 34 81-115 176-209 (467)
324 1ur5_A Malate dehydrogenase; o 91.3 0.19 6.6E-06 47.5 4.9 32 82-114 3-35 (309)
325 1trb_A Thioredoxin reductase; 91.3 0.17 5.7E-06 47.8 4.6 34 81-115 145-178 (320)
326 2vns_A Metalloreductase steap3 91.2 0.2 6.7E-06 44.6 4.7 33 81-114 28-60 (215)
327 2q7v_A Thioredoxin reductase; 91.2 0.17 6E-06 47.9 4.6 34 81-115 152-185 (325)
328 1dlj_A UDP-glucose dehydrogena 91.1 0.16 5.5E-06 50.0 4.4 30 83-114 2-31 (402)
329 2x8g_A Thioredoxin glutathione 91.1 0.16 5.5E-06 52.9 4.6 32 82-114 287-318 (598)
330 3lk7_A UDP-N-acetylmuramoylala 91.1 0.14 4.9E-06 51.2 4.0 34 81-115 9-42 (451)
331 1evy_A Glycerol-3-phosphate de 91.0 0.13 4.6E-06 49.8 3.7 31 83-114 17-47 (366)
332 2a87_A TRXR, TR, thioredoxin r 91.0 0.18 6.2E-06 48.0 4.6 33 81-114 155-187 (335)
333 3l6d_A Putative oxidoreductase 91.0 0.24 8.1E-06 46.8 5.3 33 81-114 9-41 (306)
334 4ezb_A Uncharacterized conserv 91.0 0.2 6.7E-06 47.6 4.7 32 82-114 25-57 (317)
335 1txg_A Glycerol-3-phosphate de 90.9 0.15 5.1E-06 48.7 3.8 30 83-113 2-31 (335)
336 1jay_A Coenzyme F420H2:NADP+ o 90.8 0.23 7.8E-06 43.9 4.8 31 83-114 2-33 (212)
337 2gv8_A Monooxygenase; FMO, FAD 90.8 0.2 6.7E-06 50.1 4.8 33 81-114 212-245 (447)
338 3l9w_A Glutathione-regulated p 90.8 0.21 7E-06 49.4 4.8 33 81-114 4-36 (413)
339 2zyd_A 6-phosphogluconate dehy 90.8 0.23 8E-06 50.1 5.2 33 81-114 15-47 (480)
340 3p2y_A Alanine dehydrogenase/p 90.7 0.18 6E-06 48.9 4.1 33 81-114 184-216 (381)
341 4dll_A 2-hydroxy-3-oxopropiona 90.7 0.18 6.1E-06 48.0 4.1 33 81-114 31-63 (320)
342 2a9f_A Putative malic enzyme ( 90.7 0.17 5.8E-06 48.9 3.9 34 81-115 188-222 (398)
343 2zbw_A Thioredoxin reductase; 90.7 0.18 6.2E-06 47.9 4.2 34 81-115 152-185 (335)
344 3ggo_A Prephenate dehydrogenas 90.7 0.25 8.7E-06 46.8 5.1 33 81-114 33-67 (314)
345 2qyt_A 2-dehydropantoate 2-red 90.6 0.14 4.9E-06 48.4 3.4 31 82-113 9-45 (317)
346 2xve_A Flavin-containing monoo 90.6 0.16 5.5E-06 51.1 3.9 33 81-114 197-229 (464)
347 4e21_A 6-phosphogluconate dehy 90.6 0.22 7.4E-06 48.2 4.6 33 81-114 22-54 (358)
348 1wdk_A Fatty oxidation complex 90.5 0.16 5.6E-06 53.9 4.0 32 82-114 315-346 (715)
349 3gvi_A Malate dehydrogenase; N 90.5 0.27 9.2E-06 46.7 5.1 33 81-114 7-40 (324)
350 2p4q_A 6-phosphogluconate dehy 90.5 0.24 8.3E-06 50.1 5.0 33 81-114 10-42 (497)
351 3pqe_A L-LDH, L-lactate dehydr 90.4 0.23 7.8E-06 47.3 4.5 33 81-114 5-39 (326)
352 3dk9_A Grase, GR, glutathione 90.4 0.21 7.2E-06 50.4 4.6 33 81-114 187-219 (478)
353 3fg2_P Putative rubredoxin red 90.4 0.22 7.4E-06 49.1 4.6 34 81-115 142-175 (404)
354 3ntd_A FAD-dependent pyridine 90.4 0.21 7.2E-06 51.5 4.7 33 82-115 152-184 (565)
355 3cty_A Thioredoxin reductase; 90.4 0.21 7.2E-06 47.2 4.3 34 81-115 155-188 (319)
356 3qfa_A Thioredoxin reductase 1 90.4 0.21 7.3E-06 51.0 4.6 32 82-114 211-242 (519)
357 3l8k_A Dihydrolipoyl dehydroge 90.3 0.23 7.9E-06 49.9 4.8 34 81-115 172-205 (466)
358 3c7a_A Octopine dehydrogenase; 90.3 0.19 6.6E-06 49.4 4.1 31 82-112 3-33 (404)
359 1a5z_A L-lactate dehydrogenase 90.3 0.19 6.4E-06 47.8 3.8 31 83-114 2-34 (319)
360 1nyt_A Shikimate 5-dehydrogena 90.2 0.26 9E-06 45.6 4.7 32 82-114 120-151 (271)
361 3lxd_A FAD-dependent pyridine 90.2 0.22 7.5E-06 49.2 4.5 34 81-115 152-185 (415)
362 3pdu_A 3-hydroxyisobutyrate de 90.2 0.17 5.8E-06 47.2 3.5 31 83-114 3-33 (287)
363 2i6t_A Ubiquitin-conjugating e 90.2 0.2 6.8E-06 47.2 3.9 33 82-115 15-49 (303)
364 2h78_A Hibadh, 3-hydroxyisobut 90.2 0.2 6.7E-06 47.2 3.9 32 82-114 4-35 (302)
365 3dgz_A Thioredoxin reductase 2 90.1 0.23 8E-06 50.2 4.6 32 82-114 186-217 (488)
366 3ldh_A Lactate dehydrogenase; 90.0 0.35 1.2E-05 45.9 5.5 33 81-114 21-55 (330)
367 1vl6_A Malate oxidoreductase; 90.0 0.21 7.2E-06 48.2 3.9 33 81-114 192-225 (388)
368 2pv7_A T-protein [includes: ch 89.9 0.31 1.1E-05 45.7 5.1 32 82-114 22-54 (298)
369 3cky_A 2-hydroxymethyl glutara 89.9 0.22 7.6E-06 46.7 4.1 33 81-114 4-36 (301)
370 2wpf_A Trypanothione reductase 89.9 0.19 6.5E-06 51.0 3.8 33 82-115 192-227 (495)
371 3oc4_A Oxidoreductase, pyridin 89.8 0.24 8.3E-06 49.5 4.5 34 81-115 147-180 (452)
372 1y6j_A L-lactate dehydrogenase 89.8 0.32 1.1E-05 46.1 5.1 33 81-114 7-41 (318)
373 2q3e_A UDP-glucose 6-dehydroge 89.7 0.19 6.6E-06 50.5 3.6 32 82-114 6-39 (467)
374 3phh_A Shikimate dehydrogenase 89.7 0.31 1.1E-05 44.9 4.6 33 81-114 118-150 (269)
375 2uyy_A N-PAC protein; long-cha 89.6 0.36 1.2E-05 45.7 5.3 32 82-114 31-62 (316)
376 1fec_A Trypanothione reductase 89.6 0.21 7E-06 50.7 3.8 34 81-115 187-223 (490)
377 3ius_A Uncharacterized conserv 89.6 0.28 9.4E-06 45.5 4.4 32 82-114 6-37 (286)
378 3p7m_A Malate dehydrogenase; p 89.5 0.36 1.2E-05 45.8 5.1 32 82-114 6-38 (321)
379 3ktd_A Prephenate dehydrogenas 89.5 0.36 1.2E-05 46.2 5.1 32 82-114 9-40 (341)
380 2egg_A AROE, shikimate 5-dehyd 89.5 0.36 1.2E-05 45.3 5.1 33 81-114 141-174 (297)
381 1hyh_A L-hicdh, L-2-hydroxyiso 89.4 0.24 8.1E-06 46.8 3.8 31 83-114 3-35 (309)
382 4huj_A Uncharacterized protein 89.4 0.2 6.9E-06 44.7 3.1 32 82-114 24-56 (220)
383 2f1k_A Prephenate dehydrogenas 89.4 0.31 1.1E-05 45.2 4.5 31 83-114 2-32 (279)
384 1mo9_A ORF3; nucleotide bindin 89.3 0.28 9.5E-06 50.2 4.5 33 82-115 215-247 (523)
385 3gt0_A Pyrroline-5-carboxylate 89.3 0.39 1.3E-05 43.6 5.0 32 82-114 3-38 (247)
386 4aj2_A L-lactate dehydrogenase 89.3 0.35 1.2E-05 46.0 4.9 33 81-114 19-53 (331)
387 3eag_A UDP-N-acetylmuramate:L- 89.2 0.3 1E-05 46.5 4.4 33 82-115 5-38 (326)
388 1oju_A MDH, malate dehydrogena 89.2 0.26 8.9E-06 46.1 3.8 31 83-114 2-34 (294)
389 1yqg_A Pyrroline-5-carboxylate 89.1 0.27 9.2E-06 45.1 3.9 31 83-114 2-33 (263)
390 3qsg_A NAD-binding phosphogluc 89.1 0.25 8.5E-06 46.8 3.7 33 81-114 24-57 (312)
391 2pgd_A 6-phosphogluconate dehy 89.0 0.35 1.2E-05 48.8 4.9 32 82-114 3-34 (482)
392 4gwg_A 6-phosphogluconate dehy 89.0 0.37 1.3E-05 48.4 5.0 33 81-114 4-36 (484)
393 3don_A Shikimate dehydrogenase 88.8 0.38 1.3E-05 44.6 4.6 33 81-114 117-150 (277)
394 2o3j_A UDP-glucose 6-dehydroge 88.8 0.22 7.4E-06 50.3 3.2 32 82-114 10-43 (481)
395 1vpd_A Tartronate semialdehyde 88.7 0.29 9.9E-06 45.8 3.9 32 82-114 6-37 (299)
396 3dfu_A Uncharacterized protein 88.7 0.12 3.9E-06 46.6 1.0 33 81-114 6-38 (232)
397 3h2s_A Putative NADH-flavin re 88.7 0.37 1.3E-05 42.7 4.4 31 83-114 2-33 (224)
398 1nvt_A Shikimate 5'-dehydrogen 88.6 0.39 1.3E-05 44.8 4.6 31 82-114 129-159 (287)
399 2aef_A Calcium-gated potassium 88.6 0.25 8.6E-06 44.4 3.2 33 81-115 9-41 (234)
400 1p77_A Shikimate 5-dehydrogena 88.6 0.28 9.7E-06 45.4 3.6 33 81-114 119-151 (272)
401 1pgj_A 6PGDH, 6-PGDH, 6-phosph 88.6 0.37 1.3E-05 48.6 4.7 31 83-114 3-33 (478)
402 1ldn_A L-lactate dehydrogenase 88.6 0.4 1.4E-05 45.4 4.8 33 81-114 6-40 (316)
403 3ew7_A LMO0794 protein; Q8Y8U8 88.6 0.39 1.3E-05 42.4 4.4 31 83-114 2-33 (221)
404 3gpi_A NAD-dependent epimerase 88.5 0.43 1.5E-05 44.2 4.9 33 82-115 4-36 (286)
405 3nep_X Malate dehydrogenase; h 88.5 0.35 1.2E-05 45.7 4.2 31 83-114 2-34 (314)
406 3ojo_A CAP5O; rossmann fold, c 88.5 0.29 1E-05 48.4 3.8 32 82-114 12-43 (431)
407 1yj8_A Glycerol-3-phosphate de 88.4 0.25 8.6E-06 48.1 3.3 32 82-114 22-60 (375)
408 1pjc_A Protein (L-alanine dehy 88.3 0.36 1.2E-05 46.7 4.3 32 82-114 168-199 (361)
409 3c24_A Putative oxidoreductase 88.3 0.39 1.3E-05 44.7 4.4 32 82-114 12-44 (286)
410 1cjc_A Protein (adrenodoxin re 88.3 0.41 1.4E-05 48.0 4.8 36 81-116 145-200 (460)
411 1zud_1 Adenylyltransferase THI 88.2 0.38 1.3E-05 43.9 4.1 35 81-116 28-63 (251)
412 2izz_A Pyrroline-5-carboxylate 88.2 0.45 1.5E-05 45.2 4.9 32 82-114 23-58 (322)
413 3rui_A Ubiquitin-like modifier 88.2 0.45 1.6E-05 45.2 4.8 35 81-116 34-69 (340)
414 3h8v_A Ubiquitin-like modifier 88.2 0.36 1.2E-05 45.0 4.0 35 81-116 36-71 (292)
415 1coy_A Cholesterol oxidase; ox 88.2 0.53 1.8E-05 47.8 5.7 52 255-306 241-300 (507)
416 1x13_A NAD(P) transhydrogenase 88.2 0.42 1.4E-05 46.9 4.7 33 81-114 172-204 (401)
417 4id9_A Short-chain dehydrogena 88.2 0.41 1.4E-05 45.7 4.6 34 81-115 19-53 (347)
418 1edz_A 5,10-methylenetetrahydr 88.2 0.41 1.4E-05 45.1 4.4 33 81-114 177-210 (320)
419 2gf2_A Hibadh, 3-hydroxyisobut 88.1 0.37 1.3E-05 45.0 4.2 31 83-114 2-32 (296)
420 1hyu_A AHPF, alkyl hydroperoxi 88.1 0.29 9.8E-06 50.1 3.6 33 81-114 355-387 (521)
421 3vku_A L-LDH, L-lactate dehydr 88.1 0.41 1.4E-05 45.5 4.4 33 81-114 9-43 (326)
422 2rcy_A Pyrroline carboxylate r 88.0 0.41 1.4E-05 43.8 4.3 33 82-115 5-41 (262)
423 2g5c_A Prephenate dehydrogenas 88.0 0.44 1.5E-05 44.2 4.5 31 83-114 3-35 (281)
424 3fi9_A Malate dehydrogenase; s 88.0 0.48 1.6E-05 45.3 4.8 33 81-114 8-43 (343)
425 1x0v_A GPD-C, GPDH-C, glycerol 88.0 0.24 8.3E-06 47.7 2.9 33 82-115 9-48 (354)
426 3dhn_A NAD-dependent epimerase 87.9 0.44 1.5E-05 42.3 4.4 33 82-115 5-38 (227)
427 3tri_A Pyrroline-5-carboxylate 87.8 0.57 1.9E-05 43.5 5.2 32 82-114 4-38 (280)
428 2cvz_A Dehydrogenase, 3-hydrox 87.8 0.41 1.4E-05 44.5 4.3 30 83-114 3-32 (289)
429 3c4a_A Probable tryptophan hyd 87.7 1.2 4.1E-05 43.2 7.7 51 233-301 94-144 (381)
430 2vdc_G Glutamate synthase [NAD 87.7 0.45 1.5E-05 47.7 4.7 34 81-115 264-298 (456)
431 2eez_A Alanine dehydrogenase; 87.7 0.46 1.6E-05 46.1 4.6 33 81-114 166-198 (369)
432 3u62_A Shikimate dehydrogenase 87.6 0.51 1.7E-05 43.1 4.6 31 83-114 110-141 (253)
433 2iz1_A 6-phosphogluconate dehy 87.6 0.49 1.7E-05 47.6 4.9 32 82-114 6-37 (474)
434 3iwa_A FAD-dependent pyridine 87.5 0.4 1.4E-05 48.2 4.2 34 81-115 159-193 (472)
435 2hk9_A Shikimate dehydrogenase 87.4 0.4 1.4E-05 44.4 3.8 33 81-114 129-161 (275)
436 3fbs_A Oxidoreductase; structu 87.2 0.41 1.4E-05 44.3 3.8 32 81-114 141-172 (297)
437 3jyo_A Quinate/shikimate dehyd 87.0 0.6 2E-05 43.4 4.8 33 81-114 127-160 (283)
438 3o8q_A Shikimate 5-dehydrogena 87.0 0.64 2.2E-05 43.1 5.0 33 81-114 126-159 (281)
439 3d1l_A Putative NADP oxidoredu 87.0 0.48 1.6E-05 43.5 4.1 32 82-114 11-43 (266)
440 3f8d_A Thioredoxin reductase ( 87.0 0.42 1.4E-05 44.9 3.8 34 81-115 154-187 (323)
441 4dna_A Probable glutathione re 86.9 0.54 1.8E-05 47.1 4.8 34 81-115 170-203 (463)
442 3o0h_A Glutathione reductase; 86.9 0.54 1.8E-05 47.5 4.8 34 81-115 191-224 (484)
443 2ahr_A Putative pyrroline carb 86.8 0.58 2E-05 42.7 4.6 32 82-114 4-35 (259)
444 1pjq_A CYSG, siroheme synthase 86.8 0.53 1.8E-05 47.1 4.6 33 81-114 12-44 (457)
445 4a9w_A Monooxygenase; baeyer-v 86.8 0.5 1.7E-05 45.0 4.3 32 81-114 163-194 (357)
446 3tnl_A Shikimate dehydrogenase 86.8 0.59 2E-05 44.1 4.6 33 81-114 154-187 (315)
447 1i36_A Conserved hypothetical 86.7 0.44 1.5E-05 43.6 3.7 30 83-113 2-31 (264)
448 1l7d_A Nicotinamide nucleotide 86.7 0.58 2E-05 45.6 4.7 33 81-114 172-204 (384)
449 3orf_A Dihydropteridine reduct 86.5 0.67 2.3E-05 42.1 4.8 34 81-115 22-56 (251)
450 3pwz_A Shikimate dehydrogenase 86.5 0.66 2.2E-05 42.8 4.7 33 81-114 120-153 (272)
451 3lzw_A Ferredoxin--NADP reduct 86.4 0.55 1.9E-05 44.3 4.3 33 81-114 154-186 (332)
452 4gbj_A 6-phosphogluconate dehy 86.4 0.39 1.3E-05 45.1 3.2 32 82-114 6-37 (297)
453 1np3_A Ketol-acid reductoisome 86.4 0.64 2.2E-05 44.5 4.8 32 82-114 17-48 (338)
454 2d5c_A AROE, shikimate 5-dehyd 86.4 0.66 2.2E-05 42.6 4.7 31 83-114 118-148 (263)
455 1y7t_A Malate dehydrogenase; N 86.4 0.52 1.8E-05 44.9 4.1 32 82-114 5-44 (327)
456 1hdo_A Biliverdin IX beta redu 86.3 0.64 2.2E-05 40.3 4.5 33 82-115 4-37 (206)
457 1ez4_A Lactate dehydrogenase; 86.3 0.62 2.1E-05 44.1 4.6 33 81-114 5-39 (318)
458 2vhw_A Alanine dehydrogenase; 86.3 0.61 2.1E-05 45.3 4.6 33 81-114 168-200 (377)
459 1b37_A Protein (polyamine oxid 86.2 0.81 2.8E-05 45.9 5.7 38 81-119 4-42 (472)
460 1m6i_A Programmed cell death p 86.2 1.4 4.9E-05 44.4 7.5 36 80-115 10-46 (493)
461 4ffl_A PYLC; amino acid, biosy 86.1 0.56 1.9E-05 45.3 4.3 32 83-115 3-34 (363)
462 2d4a_B Malate dehydrogenase; a 86.0 0.6 2.1E-05 44.0 4.3 31 83-114 1-32 (308)
463 3fbt_A Chorismate mutase and s 86.0 0.57 2E-05 43.5 4.0 33 81-114 122-155 (282)
464 4b4o_A Epimerase family protei 85.8 0.65 2.2E-05 43.3 4.5 31 83-114 2-33 (298)
465 3vh1_A Ubiquitin-like modifier 85.5 0.81 2.8E-05 46.9 5.1 35 81-116 327-362 (598)
466 2pzm_A Putative nucleotide sug 85.3 0.84 2.9E-05 43.2 5.0 34 81-115 20-54 (330)
467 3d0o_A L-LDH 1, L-lactate dehy 85.1 0.71 2.4E-05 43.7 4.3 33 81-114 6-40 (317)
468 3r6d_A NAD-dependent epimerase 85.0 1.1 3.8E-05 39.5 5.4 32 83-114 7-39 (221)
469 3vps_A TUNA, NAD-dependent epi 84.8 0.82 2.8E-05 42.8 4.7 34 81-115 7-41 (321)
470 4gsl_A Ubiquitin-like modifier 84.8 0.82 2.8E-05 46.9 4.8 35 81-116 326-361 (615)
471 2rir_A Dipicolinate synthase, 84.6 0.86 3E-05 42.7 4.6 33 81-114 157-189 (300)
472 1npy_A Hypothetical shikimate 84.4 0.78 2.7E-05 42.3 4.2 32 82-114 120-152 (271)
473 1o94_A Tmadh, trimethylamine d 84.4 0.56 1.9E-05 50.1 3.6 33 82-115 529-563 (729)
474 1mld_A Malate dehydrogenase; o 84.3 0.77 2.6E-05 43.4 4.2 32 83-115 2-36 (314)
475 1s3e_A Amine oxidase [flavin-c 84.3 1.9 6.6E-05 43.7 7.5 54 237-300 215-268 (520)
476 3t4e_A Quinate/shikimate dehyd 84.2 0.92 3.2E-05 42.7 4.6 33 81-114 148-181 (312)
477 3h5n_A MCCB protein; ubiquitin 84.2 0.73 2.5E-05 44.3 4.0 35 81-116 118-153 (353)
478 1lqt_A FPRA; NADP+ derivative, 84.1 0.91 3.1E-05 45.4 4.9 36 81-116 147-202 (456)
479 3ond_A Adenosylhomocysteinase; 84.1 0.85 2.9E-05 45.6 4.5 32 82-114 266-297 (488)
480 1y8q_A Ubiquitin-like 1 activa 84.1 0.76 2.6E-05 44.1 4.1 35 81-116 36-71 (346)
481 1a4i_A Methylenetetrahydrofola 84.1 0.82 2.8E-05 42.5 4.1 33 81-114 165-198 (301)
482 3o38_A Short chain dehydrogena 84.1 1.2 4.2E-05 40.6 5.4 33 81-114 22-56 (266)
483 2ydy_A Methionine adenosyltran 84.0 0.94 3.2E-05 42.5 4.7 32 82-114 3-35 (315)
484 3b1f_A Putative prephenate deh 83.9 0.74 2.5E-05 42.8 3.8 32 82-114 7-40 (290)
485 2ph5_A Homospermidine synthase 83.8 0.98 3.4E-05 44.9 4.8 36 81-116 13-51 (480)
486 3d4o_A Dipicolinate synthase s 83.7 0.99 3.4E-05 42.1 4.6 33 81-114 155-187 (293)
487 2qrj_A Saccharopine dehydrogen 83.7 1 3.5E-05 43.6 4.8 34 81-115 214-251 (394)
488 1rsg_A FMS1 protein; FAD bindi 83.6 0.94 3.2E-05 46.1 4.8 58 236-301 201-258 (516)
489 1b0a_A Protein (fold bifunctio 83.5 1 3.5E-05 41.6 4.5 33 81-114 159-192 (288)
490 1lu9_A Methylene tetrahydromet 83.5 1 3.5E-05 41.8 4.7 32 82-114 120-152 (287)
491 4gx0_A TRKA domain protein; me 83.5 0.92 3.2E-05 46.7 4.7 33 82-115 349-381 (565)
492 2yjz_A Metalloreductase steap4 83.7 0.23 8E-06 43.6 0.0 33 81-114 19-51 (201)
493 1gte_A Dihydropyrimidine dehyd 83.1 0.87 3E-05 50.6 4.6 33 82-115 333-366 (1025)
494 3abi_A Putative uncharacterize 83.0 0.99 3.4E-05 43.6 4.5 32 81-114 16-47 (365)
495 4g65_A TRK system potassium up 82.9 1.1 3.8E-05 44.8 4.9 32 81-114 235-266 (461)
496 2nwq_A Probable short-chain de 82.9 0.62 2.1E-05 43.0 2.9 32 82-114 22-54 (272)
497 3dqp_A Oxidoreductase YLBE; al 82.8 1.1 3.8E-05 39.4 4.4 32 83-115 2-34 (219)
498 2zqz_A L-LDH, L-lactate dehydr 82.8 1.1 3.7E-05 42.6 4.5 33 81-114 9-43 (326)
499 2dkn_A 3-alpha-hydroxysteroid 82.7 1.1 3.8E-05 40.3 4.4 32 83-115 3-35 (255)
500 3ngx_A Bifunctional protein fo 82.6 0.98 3.3E-05 41.4 3.9 33 81-114 150-183 (276)
No 1
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=100.00 E-value=3e-54 Score=463.49 Aligned_cols=416 Identities=18% Similarity=0.207 Sum_probs=324.7
Q ss_pred eceeecccccccccccccccceee-eecCCCCCcccc-ccccCCCCCcCCCCCCCCCCCCCCCCCCCcccEEEECCCHHH
Q 011027 16 QESVNVWGSRGRRQSCRTSAAFAF-KSSFFGKKPLSL-SVNKTRPGRALGPTGYSRLNPITASSRCHTFDVIIIGAGIIG 93 (495)
Q Consensus 16 ~~~~~~~~~~~~~~~~l~~~gf~~-k~~g~g~kr~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIIGaGiaG 93 (495)
+++++||++++.||++|.++||.+ |.|+||+||+|+ +....+.. ....+|.....+ ...+||+|||||++|
T Consensus 204 g~~~~t~~~~~~vr~~l~~aGf~~~~~~~~~~k~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~DVvIIGgGiaG 276 (689)
T 3pvc_A 204 GGTFSTFTAAGFVRRGLQQAGFNVTKVKGFGQKREMLTGTLPQQIH-APTAPWYHRPAA------TRCDDIAIIGGGIVS 276 (689)
T ss_dssp EEEEEESCCCHHHHHHHHHTTCEEEEEECSSSSCEEEEEECCSCCC-CCCCGGGCCCCC------SCCSSEEEECCSHHH
T ss_pred CCEEEeccCcHHHHHHHHhCCeEEEeccCCCccccccccccccccc-cccCCCccCccc------CCCCCEEEECCcHHH
Confidence 579999999999999999999999 999999999999 65431111 112334322211 125899999999999
Q ss_pred HHHHHHHHhcCCccEEEEcCC-cCCCCcccCCcceeeeccCCCCchHHHHHH----HHHHHHHHHHHHHHhcCCCCcccc
Q 011027 94 LTIARQLLVGSDLSVAVVDKV-VPCSGATGAGQGYIWMVHRTPGSEIWDLAL----RSNKLWKMLADSLRDQGLDPLQVI 168 (495)
Q Consensus 94 ls~A~~La~~~G~~V~liE~~-~~~~gaS~~~~g~i~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~ 168 (495)
+++|++|+ ++|++|+|||++ .++.|+|++++|.+++..........++.. .+.++|+++.. .+++ +
T Consensus 277 lsaA~~La-~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~----~~~~----~ 347 (689)
T 3pvc_A 277 ALTALALQ-RRGAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLLE----QGIA----F 347 (689)
T ss_dssp HHHHHHHH-TTTCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHHHHH----TTCC----C
T ss_pred HHHHHHHH-HCCCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHHhhh----hccc----c
Confidence 99999998 599999999997 578899999999998876655444555543 35555555421 3433 5
Q ss_pred ceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCceE---EcChhhHHHhCCCCccCCcceEEEeCCCceecHHHHHHHHHH
Q 011027 169 GWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAE---YLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEK 245 (495)
Q Consensus 169 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~~~p~~~~~~l~~ 245 (495)
.+..+|.+.+..++...+.+.. +...+++.+ +++.+++.+++| + +...++++++.+++++|..+++.|.+
T Consensus 348 ~~~~~g~l~~~~~~~~~~~~~~----~~~~g~~~~~~~~l~~~~~~~~~~-l--~~~~gg~~~p~~g~v~p~~l~~aL~~ 420 (689)
T 3pvc_A 348 DHQWCGVSQLAFDDKSRGKIEK----MLHTQWPVEFAEAMSREQLSELAG-L--DCAHDGIHYPAGGWLCPSDLTHALMM 420 (689)
T ss_dssp CEECCCEEEECCSHHHHHHHHH----HTTSCCCTTTCEEECHHHHHHHHS-S--CCSSCEEEETTCEEECHHHHHHHHHH
T ss_pred ccccCceEEeccCHHHHHHHHH----HHhcCCChHHhhccCHHHHHHhcC-C--CcccceEEecCCeEECHHHHHHHHHH
Confidence 6788999999888766554443 234566644 899999998887 4 44678999999999999999999999
Q ss_pred HhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCe-eeecCeEEEccCcchHHHHHHhhhccccccccceeecce
Q 011027 246 GNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT-LYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKG 324 (495)
Q Consensus 246 ~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~-~~~a~~VV~A~G~~s~~l~~~l~~~~~~~~~~~l~~~rg 324 (495)
.+++.| ++++++++|++|..+ +++ |.|.+.+|. .+.+|.||+|+|+|+..+.+.+ .+|+.|+||
T Consensus 421 ~a~~~G----v~i~~~t~V~~l~~~--~~~-v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~--------~lpl~p~rG 485 (689)
T 3pvc_A 421 LAQQNG----MTCHYQHELQRLKRI--DSQ-WQLTFGQSQAAKHHATVILATGHRLPEWEQTH--------HLPLSAVRG 485 (689)
T ss_dssp HHHHTT----CEEEESCCEEEEEEC--SSS-EEEEEC-CCCCEEESEEEECCGGGTTCSTTTT--------TSCCEEEEE
T ss_pred HHHhCC----CEEEeCCeEeEEEEe--CCe-EEEEeCCCcEEEECCEEEECCCcchhcccccc--------CCccccccC
Confidence 998876 689999999999886 343 688888875 5667999999999998887653 479999999
Q ss_pred eEEEEeecCcc-ccccccccccccccccCCCCCCCcccccceeeeeeeeeec--cccEEecccccccCCCccccHHHHHH
Q 011027 325 HLLVLENFNSL-KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV--IGNLVLGSSRQFAGFNTEVEQTIIDR 401 (495)
Q Consensus 325 q~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~iG~t~~~~~~~~~~~~~~~~~ 401 (495)
|++.++..+.. .++..++..+| ..|.. +|.+++|++++.++.+..++.++.+.
T Consensus 486 q~~~~~~~~~~~~l~~v~~~~~Y------------------------l~P~~~~~g~~~iGat~~~~~~d~~~~~~~~~~ 541 (689)
T 3pvc_A 486 QVSHIPTTPVLSQLQQVLCYDGY------------------------LTPVNPANQHHCIGASYQRGDIATDFRLTEQQE 541 (689)
T ss_dssp EEEEEECCTTGGGCCSEEESSSE------------------------ECCCBTTTTEEEEECCCEETBCCCCCCHHHHHH
T ss_pred cEEEECCCCccccCCeeEeCCce------------------------EccccCCCCeEEEEEeccCCCCCCCCCHHHHHH
Confidence 99999865432 22233332222 22444 67899999998888888889999999
Q ss_pred HHHHHHhhcCCcccccccccccCceeeeeeccCCCCCCcEEeecCC-------------------------------CCc
Q 011027 402 IWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPG-------------------------------LSK 450 (495)
Q Consensus 402 ~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~~t~D~~Piig~~~~-------------------------------~~~ 450 (495)
+++.+.+++|.+......+.. ..+.|+|+|++|+|++|+||++|+ .+|
T Consensus 542 ll~~l~~~~P~l~~~~~~~~~-~~~~w~G~R~~t~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~ 620 (689)
T 3pvc_A 542 NRERLLRCLPQVSWPQQVDVS-DNQARCGVRCAIRDHLPMVGAVPDYAATLAQYQDLSRRIQHGGESEVNDIAVAPVWPE 620 (689)
T ss_dssp HHHHHHHHCTTCSGGGGCCCT-TCCEEEEEEEECTTSCCEEEEEECHHHHHHHSTTHHHHC--------CCCCCCCEEEE
T ss_pred HHHHHHHhCCCcccccccccc-ccceeEEEeeecCCCCcccCcCCCHHHHHHHHHhhhccccccccccccccccCCCCCC
Confidence 999999999997621100100 134799999999999999999986 689
Q ss_pred EEEEecCCCCChhhhHHHHHHHHHHHhCCCCCCC---CCCCccCCcc
Q 011027 451 VFLATGHEGLGLSLALGTAELVADMVLTNPLKVD---SAPFAVQGRC 494 (495)
Q Consensus 451 l~~~~G~g~~G~~~ap~~a~~la~~i~g~~~~~~---~~~~~p~R~~ 494 (495)
+|+++||||+||++||++|++||++|+|++.|+| ++.|+|+||+
T Consensus 621 l~~a~G~g~~Gl~~ap~~ae~lA~~i~g~~~p~~~~~l~~~~p~Rf~ 667 (689)
T 3pvc_A 621 LFMVGGLGSRGLCSAPLVAEILAAQMFGEPLPLDAKTLAALNPNRFW 667 (689)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHTTCTTHHH
T ss_pred hHHhhcccccHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhcChhHHH
Confidence 9999999999999999999999999999999999 8999999996
No 2
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=100.00 E-value=1.2e-53 Score=458.55 Aligned_cols=415 Identities=18% Similarity=0.219 Sum_probs=322.9
Q ss_pred eceeecccccccccccccccceee-eecCCCCCcccc-cccc-CCCCCcCCCCCCCCCCCCCCCCCCCcccEEEECCCHH
Q 011027 16 QESVNVWGSRGRRQSCRTSAAFAF-KSSFFGKKPLSL-SVNK-TRPGRALGPTGYSRLNPITASSRCHTFDVIIIGAGII 92 (495)
Q Consensus 16 ~~~~~~~~~~~~~~~~l~~~gf~~-k~~g~g~kr~~l-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIIGaGia 92 (495)
+++++||++++.||++|.++||.+ |.||||+||+|+ +... .+.. ....+|..... ...+||+|||||++
T Consensus 212 g~~~~t~~~~~~vr~~L~~aGf~v~~~~~~g~krem~~~~~~~~~~~-~~~~~~~~~~~-------~~~~DVvIIGgGia 283 (676)
T 3ps9_A 212 GGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREMLCGVMEQTLPL-PCSAPWFNRTG-------SSKREAAIIGGGIA 283 (676)
T ss_dssp EEEEEESCCCHHHHHHHHHHTCEEEEEECSTTCCEEEEEECCSCCCC-CCSCGGGCCCC-------CSCCEEEEECCSHH
T ss_pred CCEEEeccCcHHHHHHHHhCCeEEEeccccccchhhhheeccccccc-cccCCcccCcc-------CCCCCEEEECCCHH
Confidence 579999999999999999999999 999999999999 6543 1111 11123322111 12589999999999
Q ss_pred HHHHHHHHHhcCCccEEEEcCC-cCCCCcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCccccceE
Q 011027 93 GLTIARQLLVGSDLSVAVVDKV-VPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGLDPLQVIGWK 171 (495)
Q Consensus 93 Gls~A~~La~~~G~~V~liE~~-~~~~gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (495)
|+++|++|+ ++|++|+|||++ .++.|+|++++|.+++..........++...+.....++.+. .+++ +.+.
T Consensus 284 GlsaA~~La-~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~----~~~~ 355 (676)
T 3ps9_A 284 SALLSLALL-RRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQ---LPVK----FDHD 355 (676)
T ss_dssp HHHHHHHHH-TTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHH---CCSC----CCEE
T ss_pred HHHHHHHHH-HCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHH---CCCC----cCcC
Confidence 999999998 599999999996 578899999999998876555444445544333333333322 2332 4577
Q ss_pred eeeeEEEecCHHHHHHHHHHHHHHHHcCCceE---EcChhhHHHhCCCCccCCcceEEEeCCCceecHHHHHHHHHHHhh
Q 011027 172 QTGSLLIGRTPEELVMLKERVKQLCEAGLRAE---YLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAVAYIEKGNR 248 (495)
Q Consensus 172 ~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~~~p~~~~~~l~~~~~ 248 (495)
.+|.+.+..++...+.+.. +...+++.+ +++.+++.+..| + +...++++++.+++++|..+++.|.+.++
T Consensus 356 ~~g~l~~~~~~~~~~~~~~----~~~~g~~~~~~~~l~~~~~~~~~~-l--~~~~gg~~~p~~g~v~p~~l~~aL~~~a~ 428 (676)
T 3ps9_A 356 WCGVTQLGWDEKSQHKIAQ----MLSMDLPAELAVAVEANAVEQITG-V--ATNCSGITYPQGGWLCPAELTRNVLELAQ 428 (676)
T ss_dssp CCCEEEECCSHHHHHHHHH----HHTSCCCTTTCEEECHHHHHHHHS-S--CCSSCEEEETTCEEECHHHHHHHHHHHHH
T ss_pred cCCeeeecCCHHHHHHHHH----HHhcCCcHHHhhhCCHHHHHHhhC-C--CccCCcEEecCCeeeCHHHHHHHHHHHHH
Confidence 8899999888766655543 334566644 899999988877 3 44678999999999999999999999998
Q ss_pred hhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHHhhhccccccccceeecceeEEE
Q 011027 249 HFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLV 328 (495)
Q Consensus 249 ~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~l~~~~~~~~~~~l~~~rgq~~~ 328 (495)
+.| ++++++++|++|..+ +++ |.|++.+|..+.+|.||+|+|+|+..|.+.+ .+|+.|+|||++.
T Consensus 429 ~~G----v~i~~~t~V~~l~~~--~~~-v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~--------~lpl~p~rGq~~~ 493 (676)
T 3ps9_A 429 QQG----LQIYYQYQLQNFSRK--DDC-WLLNFAGDQQATHSVVVLANGHQISRFSQTS--------TLPVYSVAGQVSH 493 (676)
T ss_dssp HTT----CEEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEECCGGGGGCSTTTT--------TCSCEEEEEEEEE
T ss_pred hCC----CEEEeCCeeeEEEEe--CCe-EEEEECCCCEEECCEEEECCCcchhcccccc--------CCcceeecCEEEE
Confidence 876 699999999999886 443 7888888766678999999999998887642 4799999999999
Q ss_pred EeecCcc-ccccccccccccccccCCCCCCCcccccceeeeeeeeeec--cccEEecccccccCCCccccHHHHHHHHHH
Q 011027 329 LENFNSL-KLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDV--IGNLVLGSSRQFAGFNTEVEQTIIDRIWKR 405 (495)
Q Consensus 329 ~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~iG~t~~~~~~~~~~~~~~~~~~~~~ 405 (495)
++..+.. .++..++..+| ..|.. +|.+++|++++.++.+..++.++.+.+++.
T Consensus 494 ~~~~~~~~~l~~~l~~~~Y------------------------l~P~~~~~g~~~iG~t~~~~~~d~~~~~~~~~~~l~~ 549 (676)
T 3ps9_A 494 IPTTPELAELKQVLCYDGY------------------------LTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQR 549 (676)
T ss_dssp EECCTTGGGCCSEEESSSE------------------------ECCCBTTTTEEEEECCCEETCCCCCCCHHHHHHHHHH
T ss_pred ECCCcccccCCceeECCee------------------------eccccCCCCeEEEeeccCCCCCCCCCCHHHHHHHHHH
Confidence 9865432 23333333333 22444 688999999988888888899999999999
Q ss_pred HHhhcCCcccc-cccccccCceeeeeeccCCCCCCcEEeecCC-----------------------CCcEEEEecCCCCC
Q 011027 406 AAEFYPKLRDL-CLADFISNRKVRIGLRPYMPDGKPVIGPVPG-----------------------LSKVFLATGHEGLG 461 (495)
Q Consensus 406 l~~~~p~l~~~-~~~~~~~~~~~~~g~r~~t~D~~Piig~~~~-----------------------~~~l~~~~G~g~~G 461 (495)
+.+++|.+... .+ +.. ..+.|+|+||+|+|++|+||++|+ .+|||+++||||+|
T Consensus 550 l~~~~P~l~~~~~~-d~~-~~~~~~G~R~~t~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~l~~a~G~g~~G 627 (676)
T 3ps9_A 550 LIDCFPQAQWAKEV-DVS-DKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRG 627 (676)
T ss_dssp HHHHSTTCHHHHTC-CCT-TCCEEEEEEEECTTCCCEEEEEECHHHHHHHTTTTTSCCTTCCSCCEEEEEEEEECCTTCH
T ss_pred HHHhCCCccccccC-ccc-ccceEEEEeCccCCcCCccCcCCChHHHHHHHHhhhccccccccCCCCCCEeeeecccccH
Confidence 99999987521 11 000 124799999999999999999987 68999999999999
Q ss_pred hhhhHHHHHHHHHHHhCCCCCCC---CCCCccCCcc
Q 011027 462 LSLALGTAELVADMVLTNPLKVD---SAPFAVQGRC 494 (495)
Q Consensus 462 ~~~ap~~a~~la~~i~g~~~~~~---~~~~~p~R~~ 494 (495)
|++||++|++||++|+|++.|+| +++|+|+||+
T Consensus 628 l~~Ap~~ae~lA~~i~g~~~pl~~~~l~~~~p~Rf~ 663 (676)
T 3ps9_A 628 LCSAPLCAEILAAQMSDEPIPMDASTLAALNPNRLW 663 (676)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSSBHHHHHTTCTTHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCHHHHhhhChHHhH
Confidence 99999999999999999999999 7999999996
No 3
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.6e-46 Score=377.06 Aligned_cols=361 Identities=20% Similarity=0.288 Sum_probs=294.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHHhc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (495)
++||+|||||++|+++|++|+ ++|++|+|||++.++.++|+++.|.+++.+.. ....++...+.++|+++.+.+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La-~~G~~V~lle~~~~~~gas~~~~g~~~~~~~~--~~~~~l~~~~~~~~~~l~~~~~~- 80 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELA-KRGEEVTVIEKRFIGSGSTFRCGTGIRQQFND--EANVRVMKRSVELWKKYSEEYGF- 80 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSTTCSHHHHCCCCCCCCCSS--HHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred cCCEEEECCCHHHHHHHHHHH-HCCCeEEEEeCCCCCCCccccccCeeeecCCC--hHHHHHHHHHHHHHHHHHHHhCC-
Confidence 689999999999999999998 48999999999988889999999988765433 23457778889999988766431
Q ss_pred CCCCccccceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCceEEcChhhHHHhCCCCccCCcceEEEeCCCceecHHHHH
Q 011027 161 GLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLAV 240 (495)
Q Consensus 161 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~~~p~~~~ 240 (495)
.+..+|.+.+..++...+.+.+..+.+...|++.++++++++.+.+|.+......++++.+.+++++|.+++
T Consensus 81 --------~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (382)
T 1y56_B 81 --------SFKQTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEAT 152 (382)
T ss_dssp --------CEECCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHH
T ss_pred --------CeeccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHH
Confidence 377889999998888777888888888888999999999999999998765566789999999999999999
Q ss_pred HHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHHhhhccccccc--cc
Q 011027 241 AYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD--IP 318 (495)
Q Consensus 241 ~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~l~~~~~~~~~--~~ 318 (495)
+.|.+.+++.| ++++++++|+++..+ ++++.+|++.+|. +.+|.||+|+|.|+..|.+.+ +.. +|
T Consensus 153 ~~l~~~~~~~G----v~i~~~~~v~~i~~~--~~~v~gv~~~~g~-i~a~~VV~A~G~~s~~l~~~~------g~~~~~~ 219 (382)
T 1y56_B 153 TAFAVKAKEYG----AKLLEYTEVKGFLIE--NNEIKGVKTNKGI-IKTGIVVNATNAWANLINAMA------GIKTKIP 219 (382)
T ss_dssp HHHHHHHHHTT----CEEECSCCEEEEEES--SSBEEEEEETTEE-EECSEEEECCGGGHHHHHHHH------TCCSCCC
T ss_pred HHHHHHHHHCC----CEEECCceEEEEEEE--CCEEEEEEECCcE-EECCEEEECcchhHHHHHHHc------CCCcCcC
Confidence 99999998876 689999999999875 4566668888884 567999999999998887765 455 89
Q ss_pred eeecceeEEEEeecCccccc-cccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEecc-cc-cccCCCcccc
Q 011027 319 VKPRKGHLLVLENFNSLKLN-HASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS-SR-QFAGFNTEVE 395 (495)
Q Consensus 319 l~~~rgq~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG~-t~-~~~~~~~~~~ 395 (495)
+.|.|||++.+++.... .. ..+... ....+ +..|..++ +++|+ +. +..+++..++
T Consensus 220 ~~~~~g~~~~~~~~~~~-~~~~~~~~~------------------~~~~~--y~~p~~~g-~~iG~~~~~~~~~~~~~~~ 277 (382)
T 1y56_B 220 IEPYKHQAVITQPIKRG-TINPMVISF------------------KYGHA--YLTQTFHG-GIIGGIGYEIGPTYDLTPT 277 (382)
T ss_dssp CEEEEEEEEEECCCSTT-SSCSEEEES------------------TTTTE--EEECCSSS-CCEEECSCCBSSCCCCCCC
T ss_pred CCeeEeEEEEEccCCcc-cCCCeEEec------------------CCCeE--EEEEeCCe-EEEecCCCCCCCCCCCCCC
Confidence 99999999998754321 11 111100 00011 33345566 88994 33 3445566778
Q ss_pred HHHHHHHHHHHHhhcCCcccccccccccCceeeeeeccCCCCCCcEEeecCCCCcEEEEecCCCCChhhhHHHHHHHHHH
Q 011027 396 QTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADM 475 (495)
Q Consensus 396 ~~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~~t~D~~Piig~~~~~~~l~~~~G~g~~G~~~ap~~a~~la~~ 475 (495)
.+..+.+++.+.+++|.+...++. +.|+|+|++|+|++|+||++|+.+|+|+++||+|+||++||++|+++|++
T Consensus 278 ~~~~~~l~~~~~~~~p~l~~~~~~------~~~~g~r~~t~d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~ 351 (382)
T 1y56_B 278 YEFLREVSYYFTKIIPALKNLLIL------RTWAGYYAKTPDSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAEL 351 (382)
T ss_dssp HHHHHHHHHHHHHHCGGGGGSEEE------EEEEEEEEECTTSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcCCCCce------EEEEeccccCCCCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHH
Confidence 888999999999999998765553 35999999999999999999989999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCccCCcc
Q 011027 476 VLTNPLKVDSAPFAVQGRC 494 (495)
Q Consensus 476 i~g~~~~~~~~~~~p~R~~ 494 (495)
|++++.+.+++.|+|+||.
T Consensus 352 i~~~~~~~~~~~~~~~Rf~ 370 (382)
T 1y56_B 352 ITKGKTKLPVEWYDPYRFE 370 (382)
T ss_dssp HHHSSCSSCGGGGCGGGTT
T ss_pred HhCCCCcCcccccCHhhhc
Confidence 9999888889999999995
No 4
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=100.00 E-value=6.1e-47 Score=379.68 Aligned_cols=361 Identities=17% Similarity=0.176 Sum_probs=284.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC-cCCCCcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHHh
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV-VPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRD 159 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~-~~~~gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (495)
+.||+|||||++|+++|++|+ +|++|+|||++ .++.++|+++.|++++.+.. ....++...+.++|+++.+.+.
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La--~G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~- 83 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS--AHGRVVVLEREAQPGYHSTGRSAAHYTVAYGT--PQVRALTAASRAFFDNPPAGFC- 83 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT--TTSCEEEECSSSSTTSSGGGSCCCEECSSSSC--HHHHHHHHHHHHHHHSCCTTSC-
T ss_pred cCCEEEECCcHHHHHHHHHHh--CCCCEEEEECCCCccccccccccceeecccCC--HHHHHHHHHHHHHHHHhhhhhC-
Confidence 689999999999999999997 49999999998 57889999999998776543 3456777788888876543221
Q ss_pred cCCCCccccceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCceEEcChhhHHHhCCCCccCCcceEEEeCCCceecHHHH
Q 011027 160 QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLA 239 (495)
Q Consensus 160 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~~~p~~~ 239 (495)
. ...+..+|.+.+...+ +.+.+.+..+.++..+++.++++++++.+.+|.+......++++.+.+++++|.++
T Consensus 84 --~----~~~~~~~g~l~~~~~~-~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~ 156 (381)
T 3nyc_A 84 --E----HPLLSPRPEMVVDFSD-DPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDAL 156 (381)
T ss_dssp --S----SCSEEECCEEEECSSC-CHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHH
T ss_pred --C----cccccccceEEEechH-HHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHH
Confidence 1 1237788999888764 44566677777778899999999999999999887555678999999999999999
Q ss_pred HHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHHhhhccccccc-cc
Q 011027 240 VAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD-IP 318 (495)
Q Consensus 240 ~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~l~~~~~~~~~-~~ 318 (495)
++.|.+.+++.| ++++++++|++|..+ +++ |.|++.+|+ +.+|.||+|+|+|+..|.+.+ +.. +|
T Consensus 157 ~~~l~~~a~~~G----v~i~~~~~V~~i~~~--~~~-~~V~t~~g~-i~a~~VV~A~G~~s~~l~~~~------g~~~~~ 222 (381)
T 3nyc_A 157 HQGYLRGIRRNQ----GQVLCNHEALEIRRV--DGA-WEVRCDAGS-YRAAVLVNAAGAWCDAIAGLA------GVRPLG 222 (381)
T ss_dssp HHHHHHHHHHTT----CEEESSCCCCEEEEE--TTE-EEEECSSEE-EEESEEEECCGGGHHHHHHHH------TCCCCC
T ss_pred HHHHHHHHHHCC----CEEEcCCEEEEEEEe--CCe-EEEEeCCCE-EEcCEEEECCChhHHHHHHHh------CCCCCc
Confidence 999999998876 689999999999886 443 889998885 456999999999999998875 344 68
Q ss_pred eeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEecccccc--cCCCccccH
Q 011027 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQF--AGFNTEVEQ 396 (495)
Q Consensus 319 l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG~t~~~--~~~~~~~~~ 396 (495)
+.|+|||++.++.+....... .|.+.. ....+ +..|.. |++++|++.+. ...+..++.
T Consensus 223 ~~p~rg~~~~~~~~~~~~~~~---------~p~~~~--------~~~~~--y~~p~~-g~~~ig~~~~~~~~~~~~~~~~ 282 (381)
T 3nyc_A 223 LQPKRRSAFIFAPPPGIDCHD---------WPMLVS--------LDESF--YLKPDA-GMLLGSPANADPVEAHDVQPEQ 282 (381)
T ss_dssp CEEEEEEEEEECCCTTCCCTT---------CCEEEE--------TTSSC--EEEEET-TEEEEECCCCEECCSSCCCCCH
T ss_pred eeeeEEEEEEECCCcCCCcCc---------cceEEe--------CCCCE--EEEeCC-CcEEEeCCcCCCCCcccCCCCh
Confidence 999999999887653221111 010000 00011 333444 78999998765 234555667
Q ss_pred HHHHHHHHHHHhhcCCcccccccccccCceeeeeeccCCCCCCcEEeecCCCCcEEEEecCCCCChhhhHHHHHHHHHHH
Q 011027 397 TIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMV 476 (495)
Q Consensus 397 ~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~~t~D~~Piig~~~~~~~l~~~~G~g~~G~~~ap~~a~~la~~i 476 (495)
...+.+++.+.. +|.+...++. +.|+|+|++|+|++|+||++|..+|+|+++||+|+||++||++|++||++|
T Consensus 283 ~~~~~~~~~~~~-~~~l~~~~~~------~~w~G~r~~t~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i 355 (381)
T 3nyc_A 283 LDIATGMYLIEE-ATTLTIRRPE------HTWAGLRSFVADGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALI 355 (381)
T ss_dssp HHHHHHHHHHHH-HBSCCCCCCS------EEEEEEEEECTTSCCEEEECTTSTTEEEEECCTTCTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-cCCCccccee------eeeEEccccCCCCCceecCCCCCCCeEEEEcCCChhHhhCHHHHHHHHHHH
Confidence 777888888766 5666544442 369999999999999999999999999999999999999999999999999
Q ss_pred hCCCCC-------CCCCCCccCCcc
Q 011027 477 LTNPLK-------VDSAPFAVQGRC 494 (495)
Q Consensus 477 ~g~~~~-------~~~~~~~p~R~~ 494 (495)
.|++.+ +|++.|+|+||.
T Consensus 356 ~g~~~~~~~~~~~~d~~~~~~~Rf~ 380 (381)
T 3nyc_A 356 RHQPLPAHLREHGLDEAMLSPRRLS 380 (381)
T ss_dssp TTCCCCHHHHTTTCCHHHHCGGGGC
T ss_pred hCCCCCcccccccCcccccCccccC
Confidence 999888 789999999995
No 5
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=100.00 E-value=1.3e-44 Score=363.77 Aligned_cols=367 Identities=22% Similarity=0.305 Sum_probs=285.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCC--CcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHH
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCS--GATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLR 158 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~--gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (495)
.+||+|||||++|+++|++|+ ++|++|+|||++..+. |+|+.+.++++..+.. .....++..++.++|+++.+..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La-~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~~~~- 79 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLA-KQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGE-GREYVPLALRSQELWYELEKET- 79 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHH-HTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTT-CGGGHHHHHHHHHHHHHHHHHC-
T ss_pred cCCEEEECCCHHHHHHHHHHH-hCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcC-CchHHHHHHHHHHHHHHHHHHh-
Confidence 589999999999999999998 5899999999988776 8888888888654322 2356788888999998886543
Q ss_pred hcCCCCccccceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCceEEcChhhHHHhCCCCccCCcceEEEeCCCceecHHH
Q 011027 159 DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAML 238 (495)
Q Consensus 159 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~~~p~~ 238 (495)
+.+ .+..+|.+.+...+ +.+.+++..+.+...|++.++++.+++.+.+|.+.......+++.+.+++++|.+
T Consensus 80 --~~~-----~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 151 (389)
T 2gf3_A 80 --HHK-----IFTKTGVLVFGPKG-ESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSEN 151 (389)
T ss_dssp --SSC-----CEECCCEEEEEETT-CCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHH
T ss_pred --CCc-----ceeecceEEEcCCC-chHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHH
Confidence 221 26778888887653 3334555566677788899999999999999987766667899999999999999
Q ss_pred HHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHHhhhccccccccc
Q 011027 239 AVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318 (495)
Q Consensus 239 ~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~l~~~~~~~~~~~ 318 (495)
+++.|.+.+++.| ++++++++|+++..+ ++. +.|++.+|. +.+|.||+|+|.|+..|++.+ +..+|
T Consensus 152 ~~~~l~~~~~~~G----v~i~~~~~v~~i~~~--~~~-~~v~~~~g~-~~a~~vV~A~G~~~~~l~~~~------g~~~p 217 (389)
T 2gf3_A 152 CIRAYRELAEARG----AKVLTHTRVEDFDIS--PDS-VKIETANGS-YTADKLIVSMGAWNSKLLSKL------NLDIP 217 (389)
T ss_dssp HHHHHHHHHHHTT----CEEECSCCEEEEEEC--SSC-EEEEETTEE-EEEEEEEECCGGGHHHHGGGG------TEECC
T ss_pred HHHHHHHHHHHCC----CEEEcCcEEEEEEec--CCe-EEEEeCCCE-EEeCEEEEecCccHHHHhhhh------ccCCc
Confidence 9999999998876 689999999999875 333 667887775 556999999999999888765 44589
Q ss_pred eeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccc-cEEecccc-----cccCCCc
Q 011027 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG-NLVLGSSR-----QFAGFNT 392 (495)
Q Consensus 319 l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~iG~t~-----~~~~~~~ 392 (495)
+.|.|||++.+++.... +.. ....|.+.. ...... .+..|..++ .+++|++. +.++.+.
T Consensus 218 l~~~rg~~~~~~~~~~~-~~~------~~~~p~~~~------~~~~~~--~y~~p~~~g~~~~iG~~~~~~~~~~~~~~~ 282 (389)
T 2gf3_A 218 LQPYRQVVGFFESDESK-YSN------DIDFPGFMV------EVPNGI--YYGFPSFGGCGLKLGYHTFGQKIDPDTINR 282 (389)
T ss_dssp CEEEEEEEEEECCCHHH-HBG------GGTCCEEEE------EETTEE--EEEECBSTTCCEEEEESSCCEECCTTTCCC
T ss_pred eEEEEEEEEEEecCccc-ccc------cccCCEEEE------eCCCCc--EEEcCCCCCCcEEEEEcCCCCccCcccccC
Confidence 99999999998764310 000 000010000 000011 233355566 89999765 2233345
Q ss_pred cc--cHHHHHHHHHHHHhhcCCcccccccccccCceeeeeeccCCCCCCcEEeecCCCCcEEEEecCCCCChhhhHHHHH
Q 011027 393 EV--EQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAE 470 (495)
Q Consensus 393 ~~--~~~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~~t~D~~Piig~~~~~~~l~~~~G~g~~G~~~ap~~a~ 470 (495)
.+ ++++.+.+++.+.++||.+.. .+. +.|+|+|++|+|++|+||++|..+|+|+++||+|+||++||++|+
T Consensus 283 ~~~~~~~~~~~l~~~~~~~~P~l~~-~~~------~~w~g~r~~t~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~ 355 (389)
T 2gf3_A 283 EFGVYPEDESNLRAFLEEYMPGANG-ELK------RGAVCMYTKTLDEHFIIDLHPEHSNVVIAAGFSGHGFKFSSGVGE 355 (389)
T ss_dssp CTTSSHHHHHHHHHHHHHHCGGGCS-CEE------EEEEEEEEECTTSCCEEEEETTEEEEEEEECCTTCCGGGHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCCC-Cce------EEEEEEeccCCCCCeEEccCCCCCCEEEEECCccccccccHHHHH
Confidence 56 788889999999999999865 332 359999999999999999999889999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCccCCcc
Q 011027 471 LVADMVLTNPLKVDSAPFAVQGRC 494 (495)
Q Consensus 471 ~la~~i~g~~~~~~~~~~~p~R~~ 494 (495)
++|++|.+++.+.+++.|+|+||.
T Consensus 356 ~la~~i~~~~~~~~~~~~~~~Rf~ 379 (389)
T 2gf3_A 356 VLSQLALTGKTEHDISIFSINRPA 379 (389)
T ss_dssp HHHHHHHHSCCSSCCGGGCTTCGG
T ss_pred HHHHHHcCCCCCCCcccccccccc
Confidence 999999999999999999999995
No 6
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=100.00 E-value=9.4e-44 Score=359.57 Aligned_cols=362 Identities=20% Similarity=0.251 Sum_probs=293.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhc-CC-ccEEEEcCCcCCCCcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHH
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVG-SD-LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLR 158 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~-~G-~~V~liE~~~~~~gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (495)
++||+|||||++|+++|++|+ + +| ++|+|||++.++.|+|+.+.|.+++.+..+ ...++...+.+.|+++.+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La-~~~G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~- 96 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLA-KNHGITNVAVLEKGWLAGGNMARNTTIIRSNYLWD--ESAGIYEKSLKLWEQLPEDL- 96 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HHHCCCCEEEECSSSTTCSGGGTSCCCBCCCCSSH--HHHHHHHHHHHHHHHHHHHT-
T ss_pred cCCEEEECcCHHHHHHHHHHH-HhcCCCcEEEEeCCCCCCCcccccCceeeecCCCH--HHHHHHHHHHHHHHHHHHHh-
Confidence 689999999999999999998 6 79 999999999888999999999887765432 34567778888888876543
Q ss_pred hcCCCCccccceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCceEEcChhhHHHhCCCCcc-----CCcceEEEeCCCce
Q 011027 159 DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV-----GEDSRAAFLPYDSQ 233 (495)
Q Consensus 159 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~-----~~~~~~~~~~~~g~ 233 (495)
+++ +.+..+|.+.+...+...+.+.+..+.++..|.++++++.+++.+.+|.+.. ....++++.+.+++
T Consensus 97 --~~~----~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 170 (405)
T 2gag_B 97 --EYD----FLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGI 170 (405)
T ss_dssp --TCC----CCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBB
T ss_pred --CCC----cCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCCCcccccccccceeEEEeCCCcc
Confidence 332 4577889999998888777888888888888999999999999999997764 35678999999999
Q ss_pred ecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHHhhhcccc
Q 011027 234 LDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313 (495)
Q Consensus 234 ~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~l~~~~~~ 313 (495)
++|.++++.|.+.+++.| ++++++++|+++..+ +++++.|++.+|. +.+|.||+|+|+|+..+.+.+
T Consensus 171 ~~~~~~~~~l~~~~~~~g----~~i~~~~~v~~i~~~--~~~~~~v~~~~g~-~~a~~vV~a~G~~s~~l~~~~------ 237 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMG----VDIIQNCEVTGFIKD--GEKVTGVKTTRGT-IHAGKVALAGAGHSSVLAEMA------ 237 (405)
T ss_dssp CCHHHHHHHHHHHHHHTT----CEEECSCCEEEEEES--SSBEEEEEETTCC-EEEEEEEECCGGGHHHHHHHH------
T ss_pred CCHHHHHHHHHHHHHHCC----CEEEcCCeEEEEEEe--CCEEEEEEeCCce-EECCEEEECCchhHHHHHHHc------
Confidence 999999999999988876 689999999999875 5678889988885 456999999999998887765
Q ss_pred ccccceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEecccccc-cCCCc
Q 011027 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQF-AGFNT 392 (495)
Q Consensus 314 ~~~~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG~t~~~-~~~~~ 392 (495)
+..+|+.+.+||+..+++.... +...+.. .... ++..|..++.+++|++.+. .+.+.
T Consensus 238 g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------------~~~~--~y~~p~~~g~~~ig~~~~~~~~~~~ 295 (405)
T 2gag_B 238 GFELPIQSHPLQALVSELFEPV-HPTVVMS-------------------NHIH--VYVSQAHKGELVMGAGIDSYNGYGQ 295 (405)
T ss_dssp TCCCCEEEEEEEEEEEEEBCSC-CCSEEEE-------------------TTTT--EEEEECTTSEEEEEEEECSSCCCSS
T ss_pred CCCCCccccceeEEEecCCccc-cCceEEe-------------------CCCc--EEEEEcCCCcEEEEeccCCCCcccc
Confidence 5568999999999888643211 1111110 0001 1333556788999998763 34455
Q ss_pred cccHHHHHHHHHHHHhhcCCcccccccccccCceeeeeeccCCCCCCcEEeecCCCCcEEEEecCCCCChhhhHHHHHHH
Q 011027 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELV 472 (495)
Q Consensus 393 ~~~~~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~~t~D~~Piig~~~~~~~l~~~~G~g~~G~~~ap~~a~~l 472 (495)
..+.+..+.+++.+.+++|.+....+. +.|+|+|++++|+.|+||++| .+|+|+++||+|+|+++||.+|++|
T Consensus 296 ~~~~~~~~~l~~~~~~~~p~l~~~~~~------~~w~g~~~~t~d~~p~ig~~~-~~~l~~~~G~~g~G~~~a~~~g~~l 368 (405)
T 2gag_B 296 RGAFHVIQEQMAAAVELFPIFARAHVL------RTWGGIVDTTMDASPIISKTP-IQNLYVNCGWGTGGFKGTPGAGFTL 368 (405)
T ss_dssp CCCTHHHHHHHHHHHHHCGGGGGCEEC------EEEEEEEEEETTSCCEEEECS-SBTEEEEECCGGGCSTTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCccccCCcc------eEEeeccccCCCCCCEecccC-CCCEEEEecCCCchhhHHHHHHHHH
Confidence 567778899999999999988755443 359999999999999999987 7899999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCccCCcc
Q 011027 473 ADMVLTNPLKVDSAPFAVQGRC 494 (495)
Q Consensus 473 a~~i~g~~~~~~~~~~~p~R~~ 494 (495)
|++|.++..+.+++.|+|+||.
T Consensus 369 a~~i~g~~~~~~~~~~~~~R~~ 390 (405)
T 2gag_B 369 AHTIANDEPHELNKPFSLERFE 390 (405)
T ss_dssp HHHHHHTSCCTTTTTSCSTHHH
T ss_pred HHHHhCCCCCccccccCcchhc
Confidence 9999988777789999999984
No 7
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=100.00 E-value=2e-44 Score=361.73 Aligned_cols=360 Identities=24% Similarity=0.385 Sum_probs=288.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcccCCcceeeeccCCC-CchHHHHHHHHHHHHHHHHHHHH
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTP-GSEIWDLALRSNKLWKMLADSLR 158 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS~~~~g~i~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~ 158 (495)
..+||+|||||++|+++|++|+ ++|++|+|||++.++.|+|+.+.|++.+..... .....++...+.+.|+++.+.+.
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La-~~G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 94 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLA-KENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELY 94 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTTHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHH-hCCCcEEEEeCCCCCcccchhcCceeccCccCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999998 499999999999888899999999988776532 23567888889988887766552
Q ss_pred -hcCCCCccccceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCceEEcChhhHHHhCCCCccCCcceEEEeCCCceecHH
Q 011027 159 -DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAM 237 (495)
Q Consensus 159 -~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~~~p~ 237 (495)
..+++ +.+..+|.+.+..++.+.+.+.+..+ . ...++++.+++.+.+|.+. ....++++++.+++++|.
T Consensus 95 ~~~~~~----~~~~~~g~l~~~~~~~~~~~~~~~~~----~-~~~~~l~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~ 164 (382)
T 1ryi_A 95 ALSGVD----IRQHNGGMFKLAFSEEDVLQLRQMDD----L-DSVSWYSKEEVLEKEPYAS-GDIFGASFIQDDVHVEPY 164 (382)
T ss_dssp HHHCCC----CCCBCCCEEEEESSHHHHHHHHTTTT----S-TTEEEEEHHHHHHHCTTSC-TTCCEEEEETTCCBCCHH
T ss_pred HhhCCC----cCeeecceEEEEeCHHHHHHHHHHhh----c-CCeEEECHHHHHHhCCCCC-cccceEEEeCCCeEEcHH
Confidence 23443 45778899999887766554443322 1 4688899999999998775 445688999999999999
Q ss_pred HHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHHhhhcccccccc
Q 011027 238 LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317 (495)
Q Consensus 238 ~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~l~~~~~~~~~~ 317 (495)
++++.|.+.+++.| ++++++++|+++..+ ++++ .|++.+|. +.+|.||+|+|.++..|.+.+ +..+
T Consensus 165 ~~~~~l~~~~~~~g----~~i~~~~~v~~i~~~--~~~~-~v~~~~g~-~~a~~vV~A~G~~s~~l~~~~------~~~~ 230 (382)
T 1ryi_A 165 FVCKAYVKAAKMLG----AEIFEHTPVLHVERD--GEAL-FIKTPSGD-VWANHVVVASGVWSGMFFKQL------GLNN 230 (382)
T ss_dssp HHHHHHHHHHHHTT----CEEETTCCCCEEECS--SSSE-EEEETTEE-EEEEEEEECCGGGTHHHHHHT------TCCC
T ss_pred HHHHHHHHHHHHCC----CEEEcCCcEEEEEEE--CCEE-EEEcCCce-EEcCEEEECCChhHHHHHHhc------CCCC
Confidence 99999999988876 689999999999875 4444 78888774 557999999999999888765 4567
Q ss_pred ceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEecccccccCCCccccHH
Q 011027 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTEVEQT 397 (495)
Q Consensus 318 ~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG~t~~~~~~~~~~~~~ 397 (495)
|+.|.+||++.+++.... ++..+... ..+..|..++.+++|++.+..+++..++.+
T Consensus 231 ~~~~~~g~~~~~~~~~~~-~~~~~~~~-----------------------~~~~~p~~~g~~~vG~~~~~~~~~~~~~~~ 286 (382)
T 1ryi_A 231 AFLPVKGECLSVWNDDIP-LTKTLYHD-----------------------HCYIVPRKSGRLVVGATMKPGDWSETPDLG 286 (382)
T ss_dssp CCEEEEEEEEEEECCSSC-CCSEEEET-----------------------TEEEEECTTSEEEEECCCEETCCCCSCCHH
T ss_pred ceeccceEEEEECCCCCC-ccceEEcC-----------------------CEEEEEcCCCeEEEeecccccCCCCCCCHH
Confidence 899999999988765321 21111100 113335557789999988776667677888
Q ss_pred HHHHHHHHHHhhcCCcccccccccccCceeeeeeccCCCCCCcEEeecCCCCcEEEEecCCCCChhhhHHHHHHHHHHHh
Q 011027 398 IIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVL 477 (495)
Q Consensus 398 ~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~~t~D~~Piig~~~~~~~l~~~~G~g~~G~~~ap~~a~~la~~i~ 477 (495)
..+.+++.+.+++|.+....+. +.|+|+|++++|+.|++|++|+.+|+|+++||+|+|+++||++|+++|++|.
T Consensus 287 ~~~~l~~~~~~~~p~l~~~~~~------~~w~g~~~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~ 360 (382)
T 1ryi_A 287 GLESVMKKAKTMLPAIQNMKVD------RFWAGLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIM 360 (382)
T ss_dssp HHHHHHHHHHHHCGGGGGSEEE------EEEEEEEEECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCcCCCcee------eEEEEecccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHh
Confidence 8999999999999998755442 3699999999999999999988899999999999999999999999999999
Q ss_pred CCCCCCCC-CCCccCCcc
Q 011027 478 TNPLKVDS-APFAVQGRC 494 (495)
Q Consensus 478 g~~~~~~~-~~~~p~R~~ 494 (495)
+++.++++ +.|+|+||.
T Consensus 361 ~~~~~~~~~~~~~~~Rf~ 378 (382)
T 1ryi_A 361 NKEVNQDWLHAFRIDRKE 378 (382)
T ss_dssp TCCCCHHHHHHTCSCCC-
T ss_pred CCCCCchhhcCCChhhcc
Confidence 99998888 999999996
No 8
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=100.00 E-value=3e-43 Score=351.84 Aligned_cols=362 Identities=19% Similarity=0.262 Sum_probs=271.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCC--cccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHH
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSG--ATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLR 158 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~g--aS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (495)
++||+|||||++|+++|++|+ ++|++|+|||++..+.+ +|..+.+++...+. ......++...+.++|+++. .
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La-~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~l~-~-- 76 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYAT-RAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYG-EGEKYVPLVLRAQMLWDELS-R-- 76 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHH-HTTCCEEEECSSCSSSSSSSCCSSEEEECSSCT-TCGGGHHHHHHHHHHHHHHH-T--
T ss_pred CCCEEEECCCHHHHHHHHHHH-HCCCeEEEEecCCCCCCCCCCCCccceeeeccC-CCchHHHHHHHHHHHHHHHH-H--
Confidence 579999999999999999998 48999999999876543 33333444443222 22346788889999998876 2
Q ss_pred hcCCCCccccceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCceEEcChhhHHHhCCCCccCCcceEEEeCCCceecHHH
Q 011027 159 DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAML 238 (495)
Q Consensus 159 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~~~p~~ 238 (495)
.+++ +..+..+|.+.+..++. +.+++..+.++..|++.++++.+++.+.+|.+..+...++++.+.+++++|.+
T Consensus 77 -~~~~---~~~~~~~g~l~~~~~~~--~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~ 150 (372)
T 2uzz_A 77 -HNED---DPIFVRSGVINLGPADS--TFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSEL 150 (372)
T ss_dssp -TCSS---SCSEECCCEEEEEETTC--HHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHH
T ss_pred -hCCC---ccceeeeceEEEeCCCc--HHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHH
Confidence 3331 12367889888877543 34555566677789999999999999999987656667899999999999999
Q ss_pred HHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHHhhhccccccccc
Q 011027 239 AVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDIP 318 (495)
Q Consensus 239 ~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~l~~~~~~~~~~~ 318 (495)
+++.|.+.+++.| ++++++++|+++..+ ++. +.|++.+|+ +.+|.||+|+|+|+..|++. +|
T Consensus 151 l~~~l~~~~~~~G----~~i~~~~~V~~i~~~--~~~-~~v~~~~g~-~~a~~vV~a~G~~s~~l~~~----------l~ 212 (372)
T 2uzz_A 151 AIKTWIQLAKEAG----CAQLFNCPVTAIRHD--DDG-VTIETADGE-YQAKKAIVCAGTWVKDLLPE----------LP 212 (372)
T ss_dssp HHHHHHHHHHHTT----CEEECSCCEEEEEEC--SSS-EEEEESSCE-EEEEEEEECCGGGGGGTSTT----------CC
T ss_pred HHHHHHHHHHHCC----CEEEcCCEEEEEEEc--CCE-EEEEECCCe-EEcCEEEEcCCccHHhhccc----------cC
Confidence 9999999988876 689999999999875 333 678888887 45699999999999887653 68
Q ss_pred eeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEeccccc---c----cCCC
Q 011027 319 VKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQ---F----AGFN 391 (495)
Q Consensus 319 l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG~t~~---~----~~~~ 391 (495)
+.|+|||+++++.+....... ..|.+.. ....... .+..|..++.+++|++.. . ...+
T Consensus 213 ~~p~rg~~~~~~~~~~~~~~~--------~~p~~~~-----~~~~~~~--~y~~p~~~~~~~iG~~~~g~~~~~~~~~~~ 277 (372)
T 2uzz_A 213 VQPVRKVFAWYQADGRYSVKN--------KFPAFTG-----ELPNGDQ--YYGFPAENDALKIGKHNGGQVIHSADERVP 277 (372)
T ss_dssp CEEEECCEEEECCCGGGSTTT--------TCCEEEE-----ECTTCCE--EEEECCSSSCEEEEESSCCEECCSGGGCCC
T ss_pred ceEEEEEEEEEEeccccCccc--------cCCEEEE-----ecCCCCe--EEecCCCCCeEEEEecCCCCccCChhhccC
Confidence 999999999887542211000 0000000 0000001 122344567899998652 1 1112
Q ss_pred ccccHHHHHHHHHHHHhhcCCcccccccccccCceeeeeeccCCCCCCcEEeecCCCCcEEEEecCCCCChhhhHHHHHH
Q 011027 392 TEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATGHEGLGLSLALGTAEL 471 (495)
Q Consensus 392 ~~~~~~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~~t~D~~Piig~~~~~~~l~~~~G~g~~G~~~ap~~a~~ 471 (495)
...+.+..+.+++.+.++||.+. .+. +.|+|+|++|+|++|+||++|+.+|+|+++||+|+||++||++|++
T Consensus 278 ~~~~~~~~~~l~~~~~~~~P~l~--~~~------~~~~g~r~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~ap~~g~~ 349 (372)
T 2uzz_A 278 FAEVVSDGSEAFPFLRNVLPGIG--CCL------YGAACTYDNSPDEDFIIDTLPGHDNTLLITGLSGHGFKFASVLGEI 349 (372)
T ss_dssp TTTSTTGGGSSHHHHHHHSCSCC--CEE------EECCCEEEECTTSCCCEEEETTEEEEEEECCCCSCCGGGHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCC--ccc------eeeEEeeccCCCCCeEEecCCCCCCEEEEeCCCccchhccHHHHHH
Confidence 22334566789999999999986 222 3599999999999999999998999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCccCCcc
Q 011027 472 VADMVLTNPLKVDSAPFAVQGRC 494 (495)
Q Consensus 472 la~~i~g~~~~~~~~~~~p~R~~ 494 (495)
+|++|++++.+++++.|+|+||.
T Consensus 350 la~~i~~~~~~~~~~~~~~~Rf~ 372 (372)
T 2uzz_A 350 AADFAQDKKSDFDLTPFRLSRFQ 372 (372)
T ss_dssp HHHHHTTCCCSSCCGGGCSTTCC
T ss_pred HHHHHhCCCCCCCccccCcCCCC
Confidence 99999999999999999999994
No 9
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=100.00 E-value=1.7e-43 Score=362.47 Aligned_cols=368 Identities=20% Similarity=0.213 Sum_probs=279.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCC-ccEEEEcC-CcCCCCcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHH
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSD-LSVAVVDK-VVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLR 158 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G-~~V~liE~-~~~~~gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (495)
.+||+|||||++|+++|++|++ +| .+|+|||+ ..++.++|+.+.|++++.+.. ....++...+.++|+++...
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~-~G~~~V~vlE~~~~~~~g~S~~~~g~i~~~~~~--~~~~~l~~~~~~~~~~l~~~-- 97 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKV-WSGGSVLVVDAGHAPGSGDSGRSMAAFRTFFSS--TMNRLVAGSTVRLFEDAQRG-- 97 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-HHCSCEEEEESSSSTTCSGGGSSCCEEECCCSS--HHHHHHHHHHHHHHHHHHHT--
T ss_pred cCCEEEECcCHHHHHHHHHHHh-CCCCcEEEEccCCCCCCCcccCCCcEecccCCC--HHHHHHHHHHHHHHHHHHhc--
Confidence 6899999999999999999984 89 99999999 778889999999999875432 34567778888888887653
Q ss_pred hcCCCCccccceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCce-----EEc-----------ChhhHHHhCCCCccCCc
Q 011027 159 DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA-----EYL-----------SSSDLLQAEPELMVGED 222 (495)
Q Consensus 159 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~-----------~~~~~~~~~p~l~~~~~ 222 (495)
+++ +.+..+|.+. ..++.+.+.+++..+.+.+.|.+. +++ +.+++.+. .....
T Consensus 98 --g~~----~~~~~~g~l~-~~~~~~~~~~~~~~~~~~~~g~~~~p~~~~~l~~~g~~~~~~~~~~~~~~~----~~~~~ 166 (448)
T 3axb_A 98 --GED----LGLVKSGYLF-VYDRERWREVEEPLREAGEEGRDYLIIPPEELERRLGMNTRVSDGEEAEVL----GVGDV 166 (448)
T ss_dssp --TCC----CCCBCCCEEE-EECHHHHHHHHHHHTTSCCBTTTEEEECHHHHHHHHCCCCCCTTSSHHHHH----TCCCC
T ss_pred --Ccc----cccccCCEEE-EcCHHHHHHHHHHHHHHHhhCCCccccchhhhhhcccccccCCCHHHHHhc----cCCCc
Confidence 332 4467788888 666665555555554444456666 666 77777662 23445
Q ss_pred ceEEEeCCCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEec-------------CCCcEEEEEcCCCeee-e
Q 011027 223 SRAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSN-------------STGEVEAVQTSKNTLY-S 288 (495)
Q Consensus 223 ~~~~~~~~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~-------------~~~~~~~v~~~~g~~~-~ 288 (495)
.++++.+.+++++|.++++.|.+.+++.| ++++++++|++|..+. ++++++.|.+.+|++. .
T Consensus 167 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~G----v~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g~i~~~ 242 (448)
T 3axb_A 167 EGAVLIRSAGFLDAEKVVDYYYRRASGAG----VEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDGTRVEV 242 (448)
T ss_dssp CEEEEESSEEECCHHHHHHHHHHHHHHTT----CEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTSCEEEE
T ss_pred eEEEEeCCCeEEcHHHHHHHHHHHHHhCC----CEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCCEEeec
Confidence 67899999999999999999999998876 6899999999998720 1456788988888651 5
Q ss_pred cCeEEEccCcchHHHHHHhhhccccccccceeecceeEEEEeecCccccccccccccccc---cccCCCCCCCcccccce
Q 011027 289 KKAIVVAAGCWSGSLMHDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVG---HHDLTLHPGQVNHGQIL 365 (495)
Q Consensus 289 a~~VV~A~G~~s~~l~~~l~~~~~~~~~~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~ 365 (495)
+|.||+|+|+|+..|++.+ +..+|+.|.|||++.+++.... +...+...+|.. .|.+. +. .
T Consensus 243 Ad~VV~AtG~~s~~l~~~~------g~~~~~~p~rg~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~-------~~--~ 306 (448)
T 3axb_A 243 GEKLVVAAGVWSNRLLNPL------GIDTFSRPKKRMVFRVSASTEG-LRRIMREGDLAGAGAPPLII-------LP--K 306 (448)
T ss_dssp EEEEEECCGGGHHHHHGGG------TCCCSEEEEEEEEEEEECCSHH-HHHHHHHCCTTSSSSCCEEE-------ET--T
T ss_pred CCEEEECCCcCHHHHHHHc------CCCCcccccceEEEEeCCcccc-cccccccccccccCCCceEE-------cC--C
Confidence 6999999999999888865 4568999999999999865321 111000011100 01110 00 1
Q ss_pred eeeeeeeeecc-ccEEecccccc---cCCCc--cccHHH-HHHHHHHHHhhcCCcccccccccccCceeeeeeccC-CCC
Q 011027 366 SISMTATTDVI-GNLVLGSSRQF---AGFNT--EVEQTI-IDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPY-MPD 437 (495)
Q Consensus 366 ~~~~~~~~~~~-g~~~iG~t~~~---~~~~~--~~~~~~-~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~~-t~D 437 (495)
. .+..|..+ |.+++|++.+. .+++. .++.+. .+.+++.+.++||.+....+. +.|+|+|++ |+|
T Consensus 307 ~--~y~~p~~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~------~~w~G~r~~~t~d 378 (448)
T 3axb_A 307 R--VLVRPAPREGSFWVQLSDNLGRPFALEEDPQPEEHYYSLAILPILSLYLPQFQDAYPS------GGWAGHYDISFDA 378 (448)
T ss_dssp T--EEEEEETTTTEEEEEECCCTTSCBCCCSSCCCCHHHHHHHTHHHHHHHCGGGTTCCCS------EEEEEEEEEETTS
T ss_pred c--eEEeecCCCCeEEEecCCcccCCcccccccCCChHHHHHHHHHHHHHhCcCcccCCcc------cceEEEeccccCC
Confidence 1 23345556 78999998763 23444 667787 899999999999998765443 369999999 999
Q ss_pred CCcEEeecCCCCcEEEEecCCCCChhhhHHHHHHHHHHHhCCCCC-------CCCCCCc-cCC-cc
Q 011027 438 GKPVIGPVPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNPLK-------VDSAPFA-VQG-RC 494 (495)
Q Consensus 438 ~~Piig~~~~~~~l~~~~G~g~~G~~~ap~~a~~la~~i~g~~~~-------~~~~~~~-p~R-~~ 494 (495)
++|+||++| +|+|+++||+|+||+++|++|+++|++|.+++.+ +|++.|+ |+| |.
T Consensus 379 ~~p~ig~~~--~~l~~a~G~~g~G~~~ap~~g~~la~~i~~~~~~~~~~~~~~~~~~~~~~~R~f~ 442 (448)
T 3axb_A 379 NPVVFEPWE--SGIVVAAGTSGSGIMKSDSIGRVAAAVALGMESVELYGGVEMPVKWMGLEGRRYE 442 (448)
T ss_dssp SCEEECGGG--CSEEEEECCTTCCGGGHHHHHHHHHHHHTTCSEEECTTSCEEEGGGGSSTTCCCC
T ss_pred CCcEeeecC--CCEEEEECCCchhHhHhHHHHHHHHHHHcCCCcccccccceecHhHcCccccccc
Confidence 999999997 8999999999999999999999999999999887 7889999 999 85
No 10
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=100.00 E-value=5.2e-42 Score=345.97 Aligned_cols=366 Identities=15% Similarity=0.165 Sum_probs=273.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCC--CcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHH
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCS--GATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLR 158 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~--gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (495)
.+||+|||||++|+++|++|+ ++|++|+|||++..+. |+|+.+.+++...+. .....++...+.++|+++.+...
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La-~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~ 80 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVA-ERGHRVLVLERHTFFNENGGTSGAERHWRLQYT--QEDLFRLTLETLPLWRALESRCE 80 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HTTCCEEEEESSCTTCSSSSCCSSEEEECSCCS--SHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEECCCHHHHHHHHHHH-HCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccC--cchhhhHHHHHHHHHHHHHHHhC
Confidence 589999999999999999998 5999999999987655 788777777644322 23456777888888888766543
Q ss_pred hcCCCCccccceEeeeeEEEecCHH--HHHHHHHHHHHHHHcCCceEEcChhhHHHhCCCCccCCcceEEEeCCCceecH
Q 011027 159 DQGLDPLQVIGWKQTGSLLIGRTPE--ELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA 236 (495)
Q Consensus 159 ~~~~~~~~~~~~~~~g~l~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~~~p 236 (495)
.+ .+..+|.+.+...+. ..+.+.+..+.+...|++.+.++.+++.+.+|.+..+....+++.|.+++++|
T Consensus 81 ---~~-----~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~ 152 (397)
T 2oln_A 81 ---RR-----LIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDV 152 (397)
T ss_dssp ---CC-----CEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEH
T ss_pred ---cc-----HHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcH
Confidence 11 156788888776532 11233444555667888888999999988888776555678999999999999
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHHhhhccccccc
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~l~~~~~~~~~ 316 (495)
.++++.|.+.+++.| ++++++++|++|..+ ++. +.|.+.++++ .+|.||+|+|+|+..|.+.+ +..
T Consensus 153 ~~~~~~l~~~a~~~G----v~i~~~~~V~~i~~~--~~~-v~v~t~~g~i-~a~~VV~A~G~~s~~l~~~~------g~~ 218 (397)
T 2oln_A 153 RGTLAALFTLAQAAG----ATLRAGETVTELVPD--ADG-VSVTTDRGTY-RAGKVVLACGPYTNDLLEPL------GAR 218 (397)
T ss_dssp HHHHHHHHHHHHHTT----CEEEESCCEEEEEEE--TTE-EEEEESSCEE-EEEEEEECCGGGHHHHHGGG------TCC
T ss_pred HHHHHHHHHHHHHcC----CEEECCCEEEEEEEc--CCe-EEEEECCCEE-EcCEEEEcCCcChHHHhhhc------CCC
Confidence 999999999888876 689999999999876 343 5677777754 46999999999999888765 456
Q ss_pred cceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccc----cEEeccccc------
Q 011027 317 IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIG----NLVLGSSRQ------ 386 (495)
Q Consensus 317 ~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~iG~t~~------ 386 (495)
+|+.|.+++++.+++... ....+. +... ..+ ........ +..|..++ .+++|++..
T Consensus 219 ~p~~~~~~~~~~~~~~~~-~~~~p~----~~~~-----~~~--~~~~~~~~--y~~p~~~~~~~~~~~~G~~~~~~~~~~ 284 (397)
T 2oln_A 219 LAYSVYEMAIAAYRQATP-VTEAPF----WFAF-----QQP--TPQDTNLF--YGFGHNPWAPGEFVRCGPDFEVDPLDH 284 (397)
T ss_dssp CCEEEEEEEEEEEEBCSC-CSCCCE----EEEE-----CCC--CSSSCCCE--EECCCCSSSSSSEEEEEECCCCSCCSS
T ss_pred CCeeEEEEEEEEEeecCc-ccCCCE----EEEe-----cCC--CCcccceE--EECCCCCCCCCceEEEEecCCCCCcCC
Confidence 899999999999876531 111111 0000 000 00000012 22233333 689997653
Q ss_pred ccCCCccccHHHHHHHHHHHHhhcCCcccccccccccCceeeeeecc--CCCCCCcEEeecCC----CCcEEEEecCCCC
Q 011027 387 FAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP--YMPDGKPVIGPVPG----LSKVFLATGHEGL 460 (495)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~--~t~D~~Piig~~~~----~~~l~~~~G~g~~ 460 (495)
.++.+..++.+..+.+++.+.++||.+.. .+. +.|+|+|+ +|||++|+||++|+ .+|+|+++| |+
T Consensus 285 ~~~~~~~~~~~~~~~l~~~~~~~~p~l~~-~~~------~~~~g~~~~p~t~D~~p~ig~~~~~~~~~~~l~~a~G--g~ 355 (397)
T 2oln_A 285 PSAATGVADRRQMDRLSGWLRDHLPTVDP-DPV------RTSTCLAVLPTDPERQFFLGTARDLMTHGEKLVVYGA--GW 355 (397)
T ss_dssp GGGCCSSCCHHHHHHHHHHHHHHCTTBCS-SCS------EEEEEEEEEESSTTCCCEEEESTTTSTTGGGEEEEEE--SS
T ss_pred CccccCCCCHHHHHHHHHHHHHhCCCCCC-Cce------eEEEEEecCCcCCCCCeEeecCCccccCCCCEEEEeC--cc
Confidence 22334456778889999999999999865 332 35999988 99999999999987 899999999 69
Q ss_pred ChhhhHHHHHHHHHHHhCCCCCCCCCCCccCCcc
Q 011027 461 GLSLALGTAELVADMVLTNPLKVDSAPFAVQGRC 494 (495)
Q Consensus 461 G~~~ap~~a~~la~~i~g~~~~~~~~~~~p~R~~ 494 (495)
||++||++|+++|++|++++.+.+++.|+|+||.
T Consensus 356 G~~~ap~~g~~la~~i~~~~~~~~~~~f~~~Rf~ 389 (397)
T 2oln_A 356 AFKFVPLFGRICADLAVEDSTAYDISRLAPQSAL 389 (397)
T ss_dssp CGGGHHHHHHHHHHHHHHSCCSSCCGGGSCCC--
T ss_pred hhhccHHHHHHHHHHHhCCCCCCCccccccChhh
Confidence 9999999999999999999999999999999995
No 11
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=100.00 E-value=1.5e-40 Score=331.40 Aligned_cols=350 Identities=21% Similarity=0.247 Sum_probs=277.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC-cCCCCcccCCcceeeeccCCCC-chHHHHHHHHHHHHHHHHHHHH
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV-VPCSGATGAGQGYIWMVHRTPG-SEIWDLALRSNKLWKMLADSLR 158 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~-~~~~gaS~~~~g~i~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~ 158 (495)
.+||+|||||++|+++|++|+ ++|++|+||||+ .++.++|+.+.|.++.....+. ....++...+.+.|.++.+.+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La-~~G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALA-AGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARG 82 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEECCCHHHHHHHHHHH-hCCCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHHHHHHcC
Confidence 589999999999999999998 599999999998 5788999999999987765543 3346777888888888776542
Q ss_pred hcCCCCccccceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCc-eEEcChhhHHHhCCCCccCCcceEEEeCCCceecHH
Q 011027 159 DQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLR-AEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAM 237 (495)
Q Consensus 159 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~~~p~ 237 (495)
+.+..+|.+.+..++.+.+.+.+..+.....+++ .++++.+++.+.+|.+. ..++++.+.+++++|.
T Consensus 83 ---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~ 150 (369)
T 3dme_A 83 ---------VPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALH---CTAALVSPSTGIVDSH 150 (369)
T ss_dssp ---------CCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCC---CSEEEEETTCEEECHH
T ss_pred ---------CCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCce---eeeeeECCCCEEECHH
Confidence 3478889999998887777777777777888998 99999999999998763 5688999999999999
Q ss_pred HHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCC--eeeecCeEEEccCcchHHHHHHhhhccccc-
Q 011027 238 LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKN--TLYSKKAIVVAAGCWSGSLMHDLLRETEIV- 314 (495)
Q Consensus 238 ~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g--~~~~a~~VV~A~G~~s~~l~~~l~~~~~~~- 314 (495)
++++.|.+.+++.| ++++++++|++|..+ +++.+.|.+.+| ..+.+|.||+|+|.|+..|++.+. ++.
T Consensus 151 ~~~~~l~~~~~~~G----v~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~---g~~~ 221 (369)
T 3dme_A 151 ALMLAYQGDAESDG----AQLVFHTPLIAGRVR--PEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIE---GIPR 221 (369)
T ss_dssp HHHHHHHHHHHHTT----CEEECSCCEEEEEEC--TTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEE---TSCG
T ss_pred HHHHHHHHHHHHCC----CEEECCCEEEEEEEc--CCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhc---CCCc
Confidence 99999999998876 689999999999876 344466888887 356679999999999999987631 001
Q ss_pred -cccceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEecccccc-cCCCc
Q 011027 315 -LDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQF-AGFNT 392 (495)
Q Consensus 315 -~~~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG~t~~~-~~~~~ 392 (495)
...++.|.|||++.++.+. ..+.. -|. .|. .....+ ...+..+|.+++|++.+. ++.+.
T Consensus 222 ~~~~~i~p~rG~~~~~~~~~--~~~~~----~~~-~p~----------~~~~~~--~~~~~~~g~~~iG~t~e~~~~~~~ 282 (369)
T 3dme_A 222 DSIPPEYLCKGSYFTLAGRA--PFSRL----IYP-VPQ----------HAGLGV--HLTLDLGGQAKFGPDTEWIATEDY 282 (369)
T ss_dssp GGSCCCEEEEEEEEECSSSC--SCSSE----EEE-CTT----------CSSCCC--CEEECTTSCEEECCCCEEESSCCC
T ss_pred cccceeeecceEEEEECCCC--ccCce----eec-CCC----------CCCceE--EEeCccCCcEEECCCccccccccc
Confidence 1247999999999887532 11111 121 110 011112 222456789999999876 56777
Q ss_pred cccHHHHHHHHHHHHhhcCCcccccccccccCceeeeeeccCC-----CCCCcEE-ee-cCCCCcEEEEecCCCCChhhh
Q 011027 393 EVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM-----PDGKPVI-GP-VPGLSKVFLATGHEGLGLSLA 465 (495)
Q Consensus 393 ~~~~~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~~t-----~D~~Pii-g~-~~~~~~l~~~~G~g~~G~~~a 465 (495)
.++.+..+.+++.+.+++|.+....+. ..|+|+||.+ +|+.|+| |+ .|..+|+|+++||+++||++|
T Consensus 283 ~~~~~~~~~l~~~~~~~~P~l~~~~v~------~~w~G~Rp~~~~~~~~d~~p~i~g~~~~~~~~l~~~~G~~~~G~t~a 356 (369)
T 3dme_A 283 TLDPRRADVFYAAVRSYWPALPDGALA------PGYTGIRPKISGPHEPAADFAIAGPASHGVAGLVNLYGIESPGLTAS 356 (369)
T ss_dssp CCCGGGGGGHHHHHHTTCTTCCTTCCE------EEEEEEEEESSCTTSCCCCCEEECHHHHCCTTEEEEECCCTTHHHHH
T ss_pred ccCHHHHHHHHHHHHHHCCCCChhhce------ecceeccccccCCCCCcCCeEEecccccCCCCEEEEeCCCCchHhcc
Confidence 888888999999999999998765553 3599999996 5899999 88 478899999999999999999
Q ss_pred HHHHHHHHHHHh
Q 011027 466 LGTAELVADMVL 477 (495)
Q Consensus 466 p~~a~~la~~i~ 477 (495)
|++|++++++|.
T Consensus 357 p~~a~~~a~~i~ 368 (369)
T 3dme_A 357 LAIAEETLARLA 368 (369)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 999999999984
No 12
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=100.00 E-value=1.3e-39 Score=357.10 Aligned_cols=367 Identities=20% Similarity=0.249 Sum_probs=284.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCCcC--CCCcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHH
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKVVP--CSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSL 157 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~~~--~~gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 157 (495)
.+||+|||||++|+++|++|+ ++|+ +|+|||++.. ..|+|+++.|+++... +.....++...+.++|+++..
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La-~~G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~--~~~~~~~l~~~s~~~~~~l~~-- 78 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELV-TRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTN--PSKTMASFAKYTVEKLLSLTE-- 78 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHH-HTTCCCEEEECSSCTTCCCSGGGTCCCEECCCC--SCHHHHHHHHHHHHHHHHCEE--
T ss_pred CCCEEEECcCHHHHHHHHHHH-hCCCCcEEEEeCCCCCCCcccceeCCceeecCC--CCHHHHHHHHHHHHHHHHHHh--
Confidence 589999999999999999998 5998 9999999865 3578888888876542 333455677778887776531
Q ss_pred HhcCCCCccccceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCceEEcChhhHHHhCCCCccCCcceEEEeCCCceecHH
Q 011027 158 RDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAM 237 (495)
Q Consensus 158 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~~~p~ 237 (495)
.+. ..+..+|.+.+..+++..+.+.+..+.+...|++.++++++++.+.+|.+......++++.|.+++++|.
T Consensus 79 --~~~-----~~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~ 151 (830)
T 1pj5_A 79 --DGV-----SCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAA 151 (830)
T ss_dssp --TTE-----ESEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHH
T ss_pred --hCC-----CCeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHH
Confidence 221 3478899999998887777777777777888999999999999999998876667789999999999999
Q ss_pred HHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHHhhhcccccccc
Q 011027 238 LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLDI 317 (495)
Q Consensus 238 ~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~l~~~~~~~~~~ 317 (495)
+++..|.+.+++.| ++++++++|++|..+ +++++.|.+.+|. +.+|.||+|+|+|+..+.+.+ +..+
T Consensus 152 ~l~~~L~~~a~~~G----v~i~~~t~V~~i~~~--~~~v~~V~t~~G~-i~Ad~VV~AaG~~s~~l~~~~------g~~~ 218 (830)
T 1pj5_A 152 RAVQLLIKRTESAG----VTYRGSTTVTGIEQS--GGRVTGVQTADGV-IPADIVVSCAGFWGAKIGAMI------GMAV 218 (830)
T ss_dssp HHHHHHHHHHHHTT----CEEECSCCEEEEEEE--TTEEEEEEETTEE-EECSEEEECCGGGHHHHHHTT------TCCC
T ss_pred HHHHHHHHHHHHcC----CEEECCceEEEEEEe--CCEEEEEEECCcE-EECCEEEECCccchHHHHHHh------CCCc
Confidence 99999999998876 689999999999876 5667788888885 557999999999998887754 5578
Q ss_pred ceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEecccccc---------c
Q 011027 318 PVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQF---------A 388 (495)
Q Consensus 318 ~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG~t~~~---------~ 388 (495)
|+.|++||++.+++.+..... .... .....|.+. ..... ++.++. .+.+++|++... .
T Consensus 219 pl~p~~g~~~~~~~~~~~~~~-~~~~-~~~~~pv~~--------~~~~~--~y~r~~-~~~l~iG~~~~~~~~~~~~~~~ 285 (830)
T 1pj5_A 219 PLLPLAHQYVKTTPVPAQQGR-NDQP-NGARLPILR--------HQDQD--LYYREH-GDRYGIGSYAHRPMPVDVDTLG 285 (830)
T ss_dssp CCEEEEEEEEEESCCGGGTTT-SCTT-TCCCSCEEE--------EGGGT--EEEEEE-TTEEEEEECCSCCCBCCGGGSC
T ss_pred cceeceeEEEEEecCcccccc-cccc-cCCCCCeEE--------cCCCC--EEEEEe-CCeEEEeccCCCCcccCccccc
Confidence 999999999998754321100 0000 000111110 00111 133343 347888876421 0
Q ss_pred C------------CCccccHHHHHHHHHHHHhhcCCcccccccccccCceeeeeeccCCCCCCcEEeecCCCCcEEEEec
Q 011027 389 G------------FNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGLSKVFLATG 456 (495)
Q Consensus 389 ~------------~~~~~~~~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~~t~D~~Piig~~~~~~~l~~~~G 456 (495)
. .+...+.+..+.+++.+.+++|.+....+. +.|+|+|++|+|++|+||++|+.+|+|+++|
T Consensus 286 ~t~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~------~~w~G~r~~t~D~~PiIG~~p~~~gl~va~G 359 (830)
T 1pj5_A 286 AYAPETVSEHHMPSRLDFTLEDFLPAWEATKQLLPALADSEIE------DGFNGIFSFTPDGGPLLGESKELDGFYVAEA 359 (830)
T ss_dssp CCCGGGCBTTBSTTEECCCHHHHHHHHHHHHHHCGGGGGSCEE------EEEEEEEEECTTSCCEEEECSSSBTEEEEES
T ss_pred ccccccccccccccccCCCHHHHHHHHHHHHHhCccccccCcc------eEEEeecccCCCCCeeeccCCCCCCEEEEEC
Confidence 0 122356778889999999999998765553 3599999999999999999999999999999
Q ss_pred CCCCChhhhHHHHHHHHHHHhCCCCCCCCCCCccCCcc
Q 011027 457 HEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQGRC 494 (495)
Q Consensus 457 ~g~~G~~~ap~~a~~la~~i~g~~~~~~~~~~~p~R~~ 494 (495)
| |++++|++|++||++|.++..++|++.|+|.||.
T Consensus 360 ~---G~~~ap~~g~~la~li~~~~~~~dl~~~~~~Rf~ 394 (830)
T 1pj5_A 360 V---WVTHSAGVAKAMAELLTTGRSETDLGECDITRFE 394 (830)
T ss_dssp C---CGGGHHHHHHHHHHHHHHSSCSSCCTTTBGGGCC
T ss_pred c---hHHhhHHHHHHHHHHHhCCCCCccccccChhhhc
Confidence 8 7999999999999999999989999999999995
No 13
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=100.00 E-value=7e-39 Score=327.28 Aligned_cols=359 Identities=17% Similarity=0.163 Sum_probs=256.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCCcCCCCcc-cCCcceeeeccCCCCchHH------HHHHHHHHHHHH
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKVVPCSGAT-GAGQGYIWMVHRTPGSEIW------DLALRSNKLWKM 152 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~~~~~gaS-~~~~g~i~~~~~~~~~~~~------~l~~~~~~~~~~ 152 (495)
.+||+|||||++|+++|++|+ ++|+ +|+|||++....+.+ ++..+.+.... ....... ++...+.+.|++
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La-~~G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~ 83 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLA-RRGYTNVTVLDPYPVPSAISAGNDVNKVISSG-QYSNNKDEIEVNEILAEEAFNGWKN 83 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHH-HTTCCCEEEEESSCSSCTTCTTCSSCEEECCC-CSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHH-HcCCCcEEEEeCCCCCCCCccCCCCccEEEec-cCCchhhhcchhHHHHHHHHHHHhh
Confidence 589999999999999999998 4999 999999987655443 33333333221 2233344 677777777775
Q ss_pred HHHHHHhcCCCCccccceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCce-EEcChhhHHHhCCC-CccCCcce--EEEe
Q 011027 153 LADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA-EYLSSSDLLQAEPE-LMVGEDSR--AAFL 228 (495)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~p~-l~~~~~~~--~~~~ 228 (495)
+. .. +..+..+|.+.+...+...+.+.+.... ..+.+. ++++.+++.+.+|. +......+ +++.
T Consensus 84 ~~------~~----~~~~~~~g~l~~~~~~~~~~~~~~~~~~--~~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~ 151 (438)
T 3dje_A 84 DP------LF----KPYYHDTGLLMSACSQEGLDRLGVRVRP--GEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFA 151 (438)
T ss_dssp CT------TT----GGGEECCCEEEEECSHHHHHHHHHHHCG--GGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEE
T ss_pred Cc------cc----cCcEeccceEEEecCcchHHHHHHHHhh--cccCCceecCCHHHHHHhCCcccccCCCCCceEEEe
Confidence 41 11 2457888999998877666655554443 346665 78899999999986 54344556 9999
Q ss_pred CCC-ceecHHHHHHHHHHHhhhhccCCceeEEecC---ceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHH
Q 011027 229 PYD-SQLDAMLAVAYIEKGNRHFASKGRYAEFYHD---PVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLM 304 (495)
Q Consensus 229 ~~~-g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~---~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~ 304 (495)
+.+ ++++|..+++.|.+.+++.| +++++++ +|++|..+ ++++.+|.+.+|+.+.||.||+|+|+|+..|+
T Consensus 152 ~~~~g~~~~~~~~~~L~~~a~~~G----v~i~~~t~~~~V~~i~~~--~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~ 225 (438)
T 3dje_A 152 RSGAGWAHARNALVAAAREAQRMG----VKFVTGTPQGRVVTLIFE--NNDVKGAVTADGKIWRAERTFLCAGASAGQFL 225 (438)
T ss_dssp SSSCEEECHHHHHHHHHHHHHHTT----CEEEESTTTTCEEEEEEE--TTEEEEEEETTTEEEECSEEEECCGGGGGGTS
T ss_pred CCCCEEecHHHHHHHHHHHHHhcC----CEEEeCCcCceEEEEEec--CCeEEEEEECCCCEEECCEEEECCCCChhhhc
Confidence 999 99999999999999998876 6999999 99999886 56677799999966778999999999999887
Q ss_pred HHhhhccccccccceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeecc-ccEEecc
Q 011027 305 HDLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVI-GNLVLGS 383 (495)
Q Consensus 305 ~~l~~~~~~~~~~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~iG~ 383 (495)
+ + ..++.|.+.++.+++.++... .. +...|.+.. ....+ +..|..+ +.+++|.
T Consensus 226 ~-l--------~~~~~p~~~~~~~~~l~~~~~-~~------~~~~p~~~~--------~~~~~--~~~p~~~~~~l~i~~ 279 (438)
T 3dje_A 226 D-F--------KNQLRPTAWTLVHIALKPEER-AL------YKNIPVIFN--------IERGF--FFEPDEERGEIKICD 279 (438)
T ss_dssp C-C--------TTCCEEEEEEEEEEECCGGGH-HH------HTTCCEEEE--------TTTEE--ECSCCTTTCEEEEEE
T ss_pred C-c--------ccceeeEEEEEEEEEcChHHh-hh------hcCCCEEEE--------CCCce--ecCCCCCCCeEEEEe
Confidence 6 3 246777777777665432210 00 000111100 00111 2223323 4466742
Q ss_pred c---ccc-c----------CC-CccccHHHHHHHHHHHHhhcCCcccccccccccCceeeeeeccCCCCCCcEEeecCCC
Q 011027 384 S---RQF-A----------GF-NTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPGL 448 (495)
Q Consensus 384 t---~~~-~----------~~-~~~~~~~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~~t~D~~Piig~~~~~ 448 (495)
. +.. . +. +...+.+..+.+++.+.++||.|.+.++. +.|+|+|++|||++|+||++|..
T Consensus 280 ~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~------~~~~g~~~~t~D~~piig~~p~~ 353 (438)
T 3dje_A 280 EHPGYTNMVQSADGTMMSIPFEKTQIPKEAETRVRALLKETMPQLADRPFS------FARICWCADTANREFLIDRHPQY 353 (438)
T ss_dssp CCSCEECEEECTTCCEEECCCCCSSCBHHHHHHHHHHHHHHCGGGTTCCCS------EEEEEEEEECTTSCCEEEECSSC
T ss_pred CCCCccCCccCCCcccccCCcccccCCHHHHHHHHHHHHHhCcccccCCcc------eeeEEEeCcCCCCCeEEeecCCC
Confidence 1 110 0 00 12345677889999999999999876553 36999999999999999999999
Q ss_pred CcEEEEecCCCCChhhhHHHHHHHHHHHhCCCCCCCCCCCccC
Q 011027 449 SKVFLATGHEGLGLSLALGTAELVADMVLTNPLKVDSAPFAVQ 491 (495)
Q Consensus 449 ~~l~~~~G~g~~G~~~ap~~a~~la~~i~g~~~~~~~~~~~p~ 491 (495)
+|+|+++||+|+||+++|++|++||++|+|+..+...+.|++.
T Consensus 354 ~~l~~a~G~~g~G~~~ap~~g~~la~~i~g~~~~~~~~~~~~~ 396 (438)
T 3dje_A 354 HSLVLGCGASGRGFKYLPSIGNLIVDAMEGKVPQKIHELIKWN 396 (438)
T ss_dssp TTEEEEECCTTCCGGGTTTHHHHHHHHHHTCCCHHHHHHHSCC
T ss_pred CCEEEEECCCCcchhhhHHHHHHHHHHHhCCCChhhccccCCC
Confidence 9999999999999999999999999999998766444444443
No 14
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=100.00 E-value=7.8e-39 Score=317.27 Aligned_cols=335 Identities=18% Similarity=0.205 Sum_probs=238.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCC------ccEEEEcCCcCCCCcccCCcceeeeccCC-CCchHHHHHHHHHHHHHHHH
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSD------LSVAVVDKVVPCSGATGAGQGYIWMVHRT-PGSEIWDLALRSNKLWKMLA 154 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G------~~V~liE~~~~~~gaS~~~~g~i~~~~~~-~~~~~~~l~~~~~~~~~~~~ 154 (495)
.||+|||||++|+++|++|++ +| .+|+|||++.++.++|++++|++.+.... ......++...+.+.|.++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~-~G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHE-RYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPNNPQEADWSQQTFDYLLSHV 79 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HHTTTSSSCEEEEEESSCGGGSGGGTCCCBCCCCSSCCSCTHHHHHHHHHHHHHHTTT
T ss_pred CcEEEECCCHHHHHHHHHHHH-hccccCCCceEEEEECCCCCCCccccCcceeecccCCCchHHHHHHHHHHHHHHHHHh
Confidence 389999999999999999985 77 99999999988899999999999874332 23334556666666665543
Q ss_pred HHHHhcCCCCccccce-EeeeeEEEecCHHHHHHHHHHHHHHHHcCCceEEcChhhHHHhCCCCccCCcceEEEeCCCce
Q 011027 155 DSLRDQGLDPLQVIGW-KQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQ 233 (495)
Q Consensus 155 ~~~~~~~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~ 233 (495)
.... ++ ++.+ ..+|.+.....+. . +.+.+.+.++++++.+++ +.+|. ..++++++ +++
T Consensus 80 ~~~~--~~----~~~~~~~~g~~~~~~~~~-~-------~~~~~~~~~~~~l~~~e~-~~~p~-----~~~~~~~~-~~~ 138 (351)
T 3g3e_A 80 HSPN--AE----NLGLFLISGYNLFHEAIP-D-------PSWKDTVLGFRKLTPREL-DMFPD-----YGYGWFHT-SLI 138 (351)
T ss_dssp TSTT--HH----HHTEEEEEEEEEESSCCC-C-------CGGGGTSEEEEECCHHHH-TTCTT-----CCEEEEEE-EEE
T ss_pred hccC--CC----CccEEEEEEEEEecCCcc-c-------cCHHHhCCCceECCHHHh-ccCCC-----CceEEEec-ceE
Confidence 3210 00 1223 5667766654332 1 123346778899999998 45553 45778888 699
Q ss_pred ecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHHhhhcccc
Q 011027 234 LDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEI 313 (495)
Q Consensus 234 ~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~l~~~~~~ 313 (495)
++|.++++.|.+.+++.| +++++ ++|+++... + . +.+|.||+|+|+|+..|++.
T Consensus 139 v~p~~~~~~l~~~~~~~G----v~i~~-~~V~~i~~~---~----------~-~~a~~VV~A~G~~s~~l~~~------- 192 (351)
T 3g3e_A 139 LEGKNYLQWLTERLTERG----VKFFQ-RKVESFEEV---A----------R-EGADVIVNCTGVWAGALQRD------- 192 (351)
T ss_dssp ECHHHHHHHHHHHHHHTT----CEEEE-CCCCCHHHH---H----------H-TTCSEEEECCGGGGGGTSCC-------
T ss_pred EcHHHHHHHHHHHHHHCC----CEEEE-EEeCCHHHh---h----------c-CCCCEEEECCCcChHhhcCC-------
Confidence 999999999999998876 57777 888877542 1 1 34799999999999887653
Q ss_pred ccccceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEecccccccCCCcc
Q 011027 314 VLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNTE 393 (495)
Q Consensus 314 ~~~~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG~t~~~~~~~~~ 393 (495)
.|+.|+|||++.++++. ++.++.... +.. + ....+ +..|..+ .+++|++.+.++.+..
T Consensus 193 ---~~l~p~rg~~~~~~~~~---~~~~~~~~~----~~~--------~-~~~~~--y~~p~~~-~~~iGg~~~~~~~~~~ 250 (351)
T 3g3e_A 193 ---PLLQPGRGQIMKVDAPW---MKHFILTHD----PER--------G-IYNSP--YIIPGTQ-TVTLGGIFQLGNWSEL 250 (351)
T ss_dssp ---TTCEEEEEEEEEEECTT---CCSEEEECC----TTT--------C-TTCSC--EEEECSS-CEEEECCCEETCCCCS
T ss_pred ---CceeecCCcEEEEeCCC---cceEEEecc----ccC--------C-CCcee--EEEeCCC-cEEEeeeeecCCCCCC
Confidence 78999999999998642 222221100 000 0 00112 3334445 8999999888777778
Q ss_pred ccHHHHHHHHHHHHhhcCCcccccccccccCceeeeeeccCCCCCCcE----EeecCCCCcEEEEecCCCCChhhhHHHH
Q 011027 394 VEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMPDGKPV----IGPVPGLSKVFLATGHEGLGLSLALGTA 469 (495)
Q Consensus 394 ~~~~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~~t~D~~Pi----ig~~~~~~~l~~~~G~g~~G~~~ap~~a 469 (495)
++.+..+.+++.+.++||.+.+.++. +.|+|+|++|+| .|+ ||+.|..+|+|+++||+|+||++||++|
T Consensus 251 ~~~~~~~~l~~~~~~~~P~l~~~~i~------~~w~G~r~~t~D-~p~~~~~ig~~~~~~~~~~~~G~~g~G~~~ap~~g 323 (351)
T 3g3e_A 251 NNIQDHNTIWEGCCRLEPTLKNARII------GERTGFRPVRPQ-IRLEREQLRTGPSNTEVIHNYGHGGYGLTIHWGCA 323 (351)
T ss_dssp CCHHHHHHHHHHHHHHCGGGGGCEEE------EEEEEEEEECSS-CEEEEEEECCSSSCEEEEEEECCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCccCCcEe------eeeEeeCCCCCC-ccceeeeccCCCCCCeEEEEeCCCcchHhhhHHHH
Confidence 88999999999999999998765553 369999999999 885 6667878999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCccCCc
Q 011027 470 ELVADMVLTNPLKVDSAPFAVQGR 493 (495)
Q Consensus 470 ~~la~~i~g~~~~~~~~~~~p~R~ 493 (495)
+++|++|.+......+...+++|+
T Consensus 324 ~~la~li~~~~~~~~~~~~~~~~~ 347 (351)
T 3g3e_A 324 LEAAKLFGRILEEKKLSRMPPSHL 347 (351)
T ss_dssp HHHHHHHHHHHHHTTCC-------
T ss_pred HHHHHHHHHHHHhcccccCCcccc
Confidence 999999987544334444444443
No 15
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=100.00 E-value=2.3e-36 Score=300.86 Aligned_cols=319 Identities=18% Similarity=0.191 Sum_probs=228.0
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcc-----cCCcceeeeccC-CCCchHHHHHHHHHHHHHH
Q 011027 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGAT-----GAGQGYIWMVHR-TPGSEIWDLALRSNKLWKM 152 (495)
Q Consensus 79 ~~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS-----~~~~g~i~~~~~-~~~~~~~~l~~~~~~~~~~ 152 (495)
...+||+||||||+|+++|++|+ ++|++|+|||++.++.|+| ..++|.+.+... ..+....++...+.+.|.+
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La-~~G~~V~vle~~~~~~g~s~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILA-RKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKKWVE 82 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESSCTTCTTCTTSSGGGCCCBCCCCSCTTTCHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHH-hCCCEEEEEeccCCCCcCCcCcccCcccccccCcccCCCchHHHHHHHHHHHHHHH
Confidence 34689999999999999999998 5899999999987777643 444555544322 1233455666677777766
Q ss_pred HHHHHHhcCCCCccccceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCceEEcChhhHHHhCCCCccCCcceEEEeCCCc
Q 011027 153 LADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDS 232 (495)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g 232 (495)
+.. . + ..+...+.+.+...+.+ .. .+.+++.+.+++.++.+++ | ....++++ .++
T Consensus 83 ~~~---~-~------~g~~~~~~~~~~~~~~~--~~---~~~~~~~g~~~~~l~~~~~----p-----~~~~g~~~-~~~ 137 (363)
T 1c0p_A 83 LVP---T-G------HAMWLKGTRRFAQNEDG--LL---GHWYKDITPNYRPLPSSEC----P-----PGAIGVTY-DTL 137 (363)
T ss_dssp HTT---T-T------SSEEEEEEEEEESSGGG--GG---GGTTTTTSTTCEECCGGGS----S-----TTCEEEEE-EEE
T ss_pred hCc---c-c------CCeEEECCEEEEecCcc--ch---hHHHHHhCCCcEECCHHHC----C-----CceEEEEE-ecc
Confidence 521 1 0 12334555555543322 11 1223345677888887765 3 12356677 789
Q ss_pred eecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHHhhhccc
Q 011027 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETE 312 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~l~~~~~ 312 (495)
+++|.++++.|.+.+++.| ++++. ++|+++.. + .+ .+|.||+|+|+|+..|.+.
T Consensus 138 ~v~p~~~~~~l~~~~~~~G----~~i~~-~~v~~l~~---~------~~------~a~~VV~A~G~~s~~l~~~------ 191 (363)
T 1c0p_A 138 SVHAPKYCQYLARELQKLG----ATFER-RTVTSLEQ---A------FD------GADLVVNATGLGAKSIAGI------ 191 (363)
T ss_dssp ECCHHHHHHHHHHHHHHTT----CEEEE-CCCSBGGG---T------CS------SCSEEEECCGGGGGTSBTT------
T ss_pred eecHHHHHHHHHHHHHHCC----CEEEE-EEcccHhh---c------Cc------CCCEEEECCCcchhhccCc------
Confidence 9999999999999998876 57777 88888743 1 01 4799999999999887653
Q ss_pred cccccceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEecccccccCCCc
Q 011027 313 IVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQFAGFNT 392 (495)
Q Consensus 313 ~~~~~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG~t~~~~~~~~ 392 (495)
...|+.|+|||++.++++.. +... +.+ .+.. .. +..|..+|.+++|++.+..+++.
T Consensus 192 --~~~~~~p~rg~~~~~~~~~~--~~~~---------~~~-------~~~~--~~--y~~p~~~g~~~iG~t~~~~~~~~ 247 (363)
T 1c0p_A 192 --DDQAAEPIRGQTVLVKSPCK--RCTM---------DSS-------DPAS--PA--YIIPRPGGEVICGGTYGVGDWDL 247 (363)
T ss_dssp --CCTTEEEEEEEEEEEECCCC--CCEE---------ECS-------CTTC--CE--EEEEETTTEEEEECCCEETCCCC
T ss_pred --ccCCccccCCeEEEEeCCcc--cceE---------eec-------cCCC--cE--EEEEcCCCEEEEEeeeccCCCCC
Confidence 25799999999999876531 1100 000 0001 12 33345578899999988777777
Q ss_pred cccHHHHHHHHHHHHhhcCCccc------ccccccccCceeeeeeccCCCCCCcEEeec---------------------
Q 011027 393 EVEQTIIDRIWKRAAEFYPKLRD------LCLADFISNRKVRIGLRPYMPDGKPVIGPV--------------------- 445 (495)
Q Consensus 393 ~~~~~~~~~~~~~l~~~~p~l~~------~~~~~~~~~~~~~~g~r~~t~D~~Piig~~--------------------- 445 (495)
.++.+..+.+++.+.+++|.+.. .++. +.|+|+||+|+|++|++|++
T Consensus 248 ~~~~~~~~~l~~~~~~~~P~l~~~~~~~~~~i~------~~w~G~rp~t~d~~piig~~~~~~~~~~~~~~d~~~~~g~~ 321 (363)
T 1c0p_A 248 SVNPETVQRILKHCLRLDPTISSDGTIEGIEVL------RHNVGLRPARRGGPRVEAERIVLPLDRTKSPLSLGRGSARA 321 (363)
T ss_dssp SCCHHHHHHHHHHHHHHCGGGSSSSSGGGCEEE------EEEEEEEEEETTSCEEEEEEEEESCCTTTCTTCSSCTTCCC
T ss_pred CCCHHHHHHHHHHHHHhCccccCCcccccceEe------eceEEECCCCCCCceeEEEecccccccccCccccccccccc
Confidence 88889999999999999998843 3332 36999999999999999874
Q ss_pred CCC--CcEEEEecCCCCChhhhHHHHHHHHHHHhCC
Q 011027 446 PGL--SKVFLATGHEGLGLSLALGTAELVADMVLTN 479 (495)
Q Consensus 446 ~~~--~~l~~~~G~g~~G~~~ap~~a~~la~~i~g~ 479 (495)
|.. +|+|+++||+|+||++||++|+++|++|.+.
T Consensus 322 p~~~~~~~~~a~G~~g~G~~~a~~~g~~~a~li~~~ 357 (363)
T 1c0p_A 322 AKEKEVTLVHAYGFSSAGYQQSWGAAEDVAQLVDEA 357 (363)
T ss_dssp SCCEEEEEEEEECCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccceEEEecCCCCcchheeccHHHHHHHHHHHH
Confidence 234 7999999999999999999999999999864
No 16
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=100.00 E-value=3e-36 Score=304.33 Aligned_cols=327 Identities=17% Similarity=0.134 Sum_probs=228.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcC--CccEEEEcCCcCCCCcccCCcc-eee-eccCCCCchHHHHHHHHHHHHHHHHHH
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGS--DLSVAVVDKVVPCSGATGAGQG-YIW-MVHRTPGSEIWDLALRSNKLWKMLADS 156 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~--G~~V~liE~~~~~~gaS~~~~g-~i~-~~~~~~~~~~~~l~~~~~~~~~~~~~~ 156 (495)
.+||+|||||++|+++|++|++ + |++|+|||++.++.++|+.++| .+| +.. .+.. ..++...+.++|++
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~-~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~-~~~~-~~~l~~~~~~~~~~---- 108 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQ-LAPGRSLLLVEEGGLPNEEGATILAPGVWTAQD-IPAG-QEAQAEWTREQLLG---- 108 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-HCTTSCEEEECSSCSSCTTSHHHHCCCEECGGG-CCTT-CHHHHHHHHHHHHT----
T ss_pred cCCEEEECCcHHHHHHHHHHHh-cCCCCeEEEEeCCCCCCcchhccCCcceeeccc-CCch-HHHHHHHHHHHHHH----
Confidence 5899999999999999999985 7 9999999999888888888888 563 332 2222 56677777777765
Q ss_pred HHhcCCCCccccceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCceEEcChhhHHHhCCCCcc----CCcceEEEeCCCc
Q 011027 157 LRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMV----GEDSRAAFLPYDS 232 (495)
Q Consensus 157 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~----~~~~~~~~~~~~g 232 (495)
..++. .+..+..+|.+.+..... ..| +++.+++.+.+|.+.. ....++++.+.++
T Consensus 109 --~~~~~--~~~~~~~~g~l~~~~~~~-------------~~g----~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g 167 (405)
T 3c4n_A 109 --ALGSG--KTLEVEDRPLLHLLPAGE-------------GSG----LTPTLDALADFPEALALLDPARLPVARVDPRAL 167 (405)
T ss_dssp --GGGSS--CCCCEEECCEEEEESSCC-------------SSS----CEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCE
T ss_pred --HhCCC--CCCcEEeeCeEEehhhHh-------------HCC----CCCHHHHHHhCCCccccccCCcceEEEEcCCCE
Confidence 12220 013577888876443211 112 4455565555554332 4567889999999
Q ss_pred eecHHHHHHHHHHHhhhhccCCceeEEecCcee---------EEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHH
Q 011027 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVT---------CLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSL 303 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~---------~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l 303 (495)
+++|.++++.|.+.+++.| ++++++++|+ +|..+ +++ +.|.+.+|. +.+|.||+|+|+|+..|
T Consensus 168 ~v~~~~l~~~L~~~~~~~G----v~i~~~~~v~~~~g~~~~~~i~~~--~~~-v~v~~~~g~-i~a~~VV~A~G~~s~~l 239 (405)
T 3c4n_A 168 TYRPGSLALLAAQQAIGQG----AGLLLNTRAELVPGGVRLHRLTVT--NTH-QIVVHETRQ-IRAGVIIVAAGAAGPAL 239 (405)
T ss_dssp EECHHHHHHHHHHHHHTTT----CEEECSCEEEEETTEEEEECBCC----------CBCCEE-EEEEEEEECCGGGHHHH
T ss_pred EEcHHHHHHHHHHHHHHCC----CEEEcCCEEEeccccccccceEee--CCe-EEEEECCcE-EECCEEEECCCccHHHH
Confidence 9999999999999988866 6889999999 87654 343 477777774 55699999999999888
Q ss_pred HH-HhhhccccccccceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEec
Q 011027 304 MH-DLLRETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLG 382 (495)
Q Consensus 304 ~~-~l~~~~~~~~~~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG 382 (495)
.+ .+ +...++.|++||++.++.+.. .....+.. . . ++..|..++.+++|
T Consensus 240 ~~~~~------g~~~~~~~~~g~~~~~~~~~~-~~~~~~~~-------------------~--~--~y~~p~~~g~~~~G 289 (405)
T 3c4n_A 240 VEQGL------GLHTRHGRAYRQFPRLDLLSG-AQTPVLRA-------------------S--G--LTLRPQNGGYTLVP 289 (405)
T ss_dssp HHHHH------CCCCCCEEEEEECCEECSCCC-TTCCEEEE-------------------T--T--EEEEEETTEEEEEC
T ss_pred HHHhc------CCCCCcccceeEEEEECCCCc-cCCCeEEC-------------------C--c--EEEEEcCCCeEEEe
Confidence 87 65 456789999999988764321 11111100 0 1 13345667788899
Q ss_pred cccc--ccCCC----------ccccHHHHHHHHHHHHhhcCCccccccc------ccccCceeeeeeccCCCCCCcEEee
Q 011027 383 SSRQ--FAGFN----------TEVEQTIIDRIWKRAAEFYPKLRDLCLA------DFISNRKVRIGLRPYMPDGKPVIGP 444 (495)
Q Consensus 383 ~t~~--~~~~~----------~~~~~~~~~~~~~~l~~~~p~l~~~~~~------~~~~~~~~~~g~r~~t~D~~Piig~ 444 (495)
+++. ..+++ ...+.+..+.+++.+ ++||.+...++. ++ .+.|+|+|++|+|++|+||+
T Consensus 290 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~P~l~~~~~~~~r~~~~i---~~~w~G~r~~t~D~~P~ig~ 365 (405)
T 3c4n_A 290 AIHHRDPHGYHPAGGSLTGVPTGLRRELLEDLVGLM-DAVPALAGEGLELGRSSADV---PGAWLALPGGRPDAPPQAEE 365 (405)
T ss_dssp CCCSCBCSSCCCCCCCBTTBCCSSCHHHHHHHHHHT-TTCGGGGSSCBCCCSSGGGS---CEEEEEEGGGCTTCCCEEEE
T ss_pred ccccccccCcCcccccccccccCCCHHHHHHHHHHH-HhCCCccccCccccccccce---eeEEEeecCcCCCCCCEecc
Confidence 8853 22222 123455556666553 889988765411 11 24699999999999999999
Q ss_pred cCCCCcEEEEecCCCCChhhhHHHHHHHHHHHhCCC
Q 011027 445 VPGLSKVFLATGHEGLGLSLALGTAELVADMVLTNP 480 (495)
Q Consensus 445 ~~~~~~l~~~~G~g~~G~~~ap~~a~~la~~i~g~~ 480 (495)
+| +|+|+++||+++ +++||++|++||++|++++
T Consensus 366 ~~--~gl~~a~G~~g~-~~~ap~~a~~la~~i~~~~ 398 (405)
T 3c4n_A 366 LA--PGLHLLLGGPLA-DTLGLAAAHELAQRVSASL 398 (405)
T ss_dssp EE--TTEEEEECCTTH-HHHHHHHHHHHHHHHHHHH
T ss_pred cC--CCeEEEEccCcH-HHHHHHHHHHHHHHHhCch
Confidence 97 899999999875 6999999999999998754
No 17
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=100.00 E-value=5.2e-32 Score=283.81 Aligned_cols=348 Identities=14% Similarity=0.106 Sum_probs=238.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHHhc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (495)
.+||+||||||+|+++|++|+ ++|++|+|||++++++|+|+++.|+++....+......++...+...+..+... ...
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La-~rG~~V~LlE~~~~~~GtS~~s~gli~~g~ryl~~~~~~l~~~~~~e~~~l~~~-~~~ 109 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAA-ASGIKTGLIEMQDFAEGTSSRSTKLVHGGIRYLKTFDVEVVADTVGERAVVQGI-APH 109 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSTTCSGGGSSCSEECCCGGGGGGTCHHHHHHHHHHHHHHHHH-CTT
T ss_pred CCCEEEECcCHHHHHHHHHHH-HCCCcEEEEeCCCCCCCcccccccccccccchhhccChHHHHHHHHHHHHHHHh-Ccc
Confidence 589999999999999999998 499999999999999999999999998776544333345555555444433321 111
Q ss_pred CCCCccccceEeeeeEEEecC--------HHHHHHHHHHHHHHH---HcCCceEEcChhhHHHhCCCCccCCcceEEEeC
Q 011027 161 GLDPLQVIGWKQTGSLLIGRT--------PEELVMLKERVKQLC---EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLP 229 (495)
Q Consensus 161 ~~~~~~~~~~~~~g~l~~~~~--------~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~ 229 (495)
. ....+.+..... ..........++.+. ..+.+.++++++++.+.+|.+..+...++++++
T Consensus 110 -------~-~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~e~~~~~P~l~~~~~~gg~~~~ 181 (571)
T 2rgh_A 110 -------I-PKPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKYENYTLTPEEVLEREPFLKKEGLKGAGVYL 181 (571)
T ss_dssp -------S-SEECCEEEEEESSSSSCSCCHHHHHHHHHHHHHHHTCSSSTTCCEEECHHHHHHHCTTSCCTTEEEEEEEC
T ss_pred -------c-ccccCceEEeecccccccccHHHHHHHHHHHHHHhhhhccCCCcEEECHHHHHHhCcCCchhhceEEEEec
Confidence 1 233444433221 111111122233332 245578999999999999988755567788887
Q ss_pred CCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcC---CC--eeeecCeEEEccCcchHHHH
Q 011027 230 YDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS---KN--TLYSKKAIVVAAGCWSGSLM 304 (495)
Q Consensus 230 ~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~---~g--~~~~a~~VV~A~G~~s~~l~ 304 (495)
+ ++++|.+++..+.+.+.+.| +.++++++|+++..+ ++++|+|.+. +| ..+.+|.||+|+|+|+..|.
T Consensus 182 d-g~v~~~~l~~~l~~~a~~~G----a~i~~~t~V~~l~~~--~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~ 254 (571)
T 2rgh_A 182 D-FRNNDARLVIDNIKKAAEDG----AYLVSKMKAVGFLYE--GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVR 254 (571)
T ss_dssp C-EECCHHHHHHHHHHHHHHTT----CEEESSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHH
T ss_pred C-CeEchHHHHHHHHHHHHHcC----CeEEeccEEEEEEEe--CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHH
Confidence 5 78999999999999888876 689999999999886 5678888742 23 35667999999999999987
Q ss_pred HHhhhccccccc-cceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEecc
Q 011027 305 HDLLRETEIVLD-IPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383 (495)
Q Consensus 305 ~~l~~~~~~~~~-~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG~ 383 (495)
+... .... .++.|+||+++.++.... ....++ +...+ ..+.+ .+++. |. ++.++||+
T Consensus 255 ~~~g----~~~~~~~i~p~rG~~l~~~~~~~-~~~~~~----~~~~~--------~~dgr--~~~~~--P~-~~~~~iG~ 312 (571)
T 2rgh_A 255 NLNF----TRPVSPKMRPTKGIHLVVDAKKL-PVPQPT----YFDTG--------KQDGR--MVFAI--PR-ENKTYFGT 312 (571)
T ss_dssp TTCC----SSCCCCCBCCEEEEEEEEEGGGS-CCSSCE----EEECS--------SSSSC--EEEEE--EE-TTEEEECC
T ss_pred Hhhc----cCccCceeeccceEEEEeccccC-CCCcEE----EEecc--------CCCCc--EEEEE--Ec-CCeEEEcC
Confidence 6431 0112 569999999999975321 111111 11000 00111 11222 33 47889999
Q ss_pred cccc---cCCCccccHHHHHHHHHHHHhhcCCc--ccccccccccCceeeeeeccCCCCCC---------cEEeecCCCC
Q 011027 384 SRQF---AGFNTEVEQTIIDRIWKRAAEFYPKL--RDLCLADFISNRKVRIGLRPYMPDGK---------PVIGPVPGLS 449 (495)
Q Consensus 384 t~~~---~~~~~~~~~~~~~~~~~~l~~~~p~l--~~~~~~~~~~~~~~~~g~r~~t~D~~---------Piig~~~~~~ 449 (495)
|.+. +..+..++.++.+.+++.+.++||.+ ....+ ...|+|+||.++|+. |+|+.. .+
T Consensus 313 t~~~~~~~~~~~~~~~~~~~~ll~~~~~~~P~~~l~~~~v------~~~waG~Rp~~~d~~~~~~~~~r~~~i~~~--~~ 384 (571)
T 2rgh_A 313 TDTDYQGDFTDPKVTQEDVDYLLDVINHRYPEANITLADI------EASWAGLRPLLIGNSGSPSTISRGSSLERE--PD 384 (571)
T ss_dssp CCEECCSCSSSCCCCHHHHHHHHHHHHHHSTTTCCCGGGC------CEEEEEEECCBCC-----------EEEEEC--TT
T ss_pred CCcCCCCCcCCCCCCHHHHHHHHHHHHHhcCccCCchhce------eEEeEEeeeccCCCCCCcccCCCCcEEecC--CC
Confidence 8753 33456788899999999999999974 33333 246999999998764 677753 58
Q ss_pred cEEEEecCCCCChhhhHHHHHHHHHHHhC
Q 011027 450 KVFLATGHEGLGLSLALGTAELVADMVLT 478 (495)
Q Consensus 450 ~l~~~~G~g~~G~~~ap~~a~~la~~i~g 478 (495)
|++.++|. + +++++.+|+.++++|.+
T Consensus 385 gl~~v~GG--k-~Tt~r~~Ae~~~~~i~~ 410 (571)
T 2rgh_A 385 GLLTLSGG--K-ITDYRKMAEGALRLIRQ 410 (571)
T ss_dssp SCEEEEEC--C-GGGHHHHHHHHHHHHHH
T ss_pred CeEEEeCc--c-hhhHHHHHHHHHHHHHH
Confidence 99977663 2 99999999999998864
No 18
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=100.00 E-value=3.8e-32 Score=281.44 Aligned_cols=347 Identities=16% Similarity=0.094 Sum_probs=239.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHHhc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (495)
.+||+|||||++|+++|++|+ ++|++|+|||++++++|+|+++.|++++...+......++..++.+.|..+.+...+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La-~~G~~V~llE~~~~~~gtS~~s~gli~~g~~~~~~~~~~l~~~~~~~~~~l~~~~~~- 80 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAA-GRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPH- 80 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSTTCSGGGSSCCEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCTT-
T ss_pred cCCEEEECcCHHHHHHHHHHH-hCCCCEEEEECCCCCCCccccccccccccchhhhhchHHHHHHHHHHHHHHHHhCCc-
Confidence 589999999999999999998 499999999999899999999999998766544333456777777766665433211
Q ss_pred CCCCccccceEeeeeEEEecCHH-HHHHHHHHHHHHHHcCCceEEcChhhHHHhC--CCCccCCcceEEEeCCCceecHH
Q 011027 161 GLDPLQVIGWKQTGSLLIGRTPE-ELVMLKERVKQLCEAGLRAEYLSSSDLLQAE--PELMVGEDSRAAFLPYDSQLDAM 237 (495)
Q Consensus 161 ~~~~~~~~~~~~~g~l~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--p~l~~~~~~~~~~~~~~g~~~p~ 237 (495)
.....+.+....... ...............+ ..++++++++.+.+ |.+... ..+++++ .+++++|.
T Consensus 81 --------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~P~l~~~-~~~~~~~-~~g~v~~~ 149 (501)
T 2qcu_A 81 --------IAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLG-KRTSLPGSTGLRFGANSVLKPE-IKRGFEY-SDCWVDDA 149 (501)
T ss_dssp --------TEEEEEEEEECCTTTSCHHHHHHHHHHHHSSS-CCSSSCCCEEEECCTTSSBCTT-CCEEEEE-EEEEECHH
T ss_pred --------cccccCeEeccCcccchHHHHHHHHHHHHhcC-CcEEECHHHHHHhhcCCCcchh-ceEEEEe-eCCEEcHH
Confidence 123444443322210 1111111122222222 56778888877777 876532 4556655 57899999
Q ss_pred HHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEc---CCCe--eeecCeEEEccCcchHHHHHH-hhhcc
Q 011027 238 LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT---SKNT--LYSKKAIVVAAGCWSGSLMHD-LLRET 311 (495)
Q Consensus 238 ~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~---~~g~--~~~a~~VV~A~G~~s~~l~~~-l~~~~ 311 (495)
+++..|.+.+.+.| ++++++++|+++..+ + ++|+|.+ .+|+ .+.+|.||+|+|+|+..|.+. +..
T Consensus 150 ~l~~~l~~~a~~~G----v~i~~~~~V~~l~~~--~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~-- 220 (501)
T 2qcu_A 150 RLVLANAQMVVRKG----GEVLTRTRATSARRE--N-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHL-- 220 (501)
T ss_dssp HHHHHHHHHHHHTT----CEEECSEEEEEEEEE--T-TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCC--
T ss_pred HHHHHHHHHHHHcC----CEEEcCcEEEEEEEe--C-CEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccC--
Confidence 99999999998876 688999999999886 3 5788877 3564 556799999999999998774 310
Q ss_pred ccccccceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEecccccc---c
Q 011027 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQF---A 388 (495)
Q Consensus 312 ~~~~~~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG~t~~~---~ 388 (495)
....++.|.||+++.++... .....+ +... .+.+ .+ +..|..++.+++|+|... +
T Consensus 221 --~~~~~i~p~rG~~~~~~~~~--~~~~~~----~~~~----------~dg~--~~--~~~P~~~g~~~iG~t~~~~~~~ 278 (501)
T 2qcu_A 221 --PSPYGIRLIKGSHIVVPRVH--TQKQAY----ILQN----------EDKR--IV--FVIPWMDEFSIIGTTDVEYKGD 278 (501)
T ss_dssp --CCSSCBCCEEEEEEEEECSS--SCSCEE----EEEC----------TTSC--EE--EEEEETTTEEEEECCCEECCSC
T ss_pred --CcccccccceeEEEEECCCC--CCceEE----Eeec----------CCCC--EE--EEEEcCCCcEEEcCCCCCCCCC
Confidence 11368999999999887421 111111 1000 0111 11 223455678899998653 2
Q ss_pred CCCccccHHHHHHHHHHHHhhcC-CcccccccccccCceeeeeeccCCCCCCcEEeecCC-----------CCcEEEEec
Q 011027 389 GFNTEVEQTIIDRIWKRAAEFYP-KLRDLCLADFISNRKVRIGLRPYMPDGKPVIGPVPG-----------LSKVFLATG 456 (495)
Q Consensus 389 ~~~~~~~~~~~~~~~~~l~~~~p-~l~~~~~~~~~~~~~~~~g~r~~t~D~~Piig~~~~-----------~~~l~~~~G 456 (495)
..+..++.++.+.+++.+.++|| .+....+. ..|+|+||.++|+.|++++++. .+|++.++|
T Consensus 279 ~~~~~~~~~~~~~l~~~~~~~~p~~l~~~~v~------~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~G 352 (501)
T 2qcu_A 279 PKAVKIEESEINYLLNVYNTHFKKQLSRDDIV------WTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFG 352 (501)
T ss_dssp GGGCCCCHHHHHHHHHHHHHHBSSCCCGGGCC------EEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCCCcccEE------EEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeC
Confidence 34566788899999999999999 66654442 3699999999999998777642 134555555
Q ss_pred CCCCChhhhHHHHHHHHHHHhCCC
Q 011027 457 HEGLGLSLALGTAELVADMVLTNP 480 (495)
Q Consensus 457 ~g~~G~~~ap~~a~~la~~i~g~~ 480 (495)
. |++++|++||.+++++.+..
T Consensus 353 g---~~t~~~~~Ae~~~~~~~~~~ 373 (501)
T 2qcu_A 353 G---KLTTYRKLAEHALEKLTPYY 373 (501)
T ss_dssp C---CGGGHHHHHHHHHHHHGGGS
T ss_pred c---cccchHHHHHHHHHHHHHhh
Confidence 3 79999999999999998653
No 19
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.97 E-value=4.8e-30 Score=268.37 Aligned_cols=346 Identities=20% Similarity=0.143 Sum_probs=221.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHHhc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (495)
.+||+|||||++|+++|+.|+ ++|++|+|||++++++|+|+++.++++....+......++..++......+.+... .
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La-~~G~~V~LlEk~d~~~GtS~~ss~lihgG~ryl~~~~~~l~~e~~~e~~~l~~~ap-~ 95 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQ-VRGIQTGLVEMNDFASGTSSRSTKLVHGGLRYLKQFEIKLVAEVGKERAIVYENAP-H 95 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHH-TTTCCEEEEESSSTTCSGGGSSCCEECC---------------CHHHHHHHHHHCT-T
T ss_pred CCCEEEECCCHHHHHHHHHHH-hCCCcEEEEECCCCCCCcccCCcCccccchHHHHhcCHHHHHHHHHHHHHHHHhCc-h
Confidence 689999999999999999998 59999999999999999999999999877665433222333333322222222111 0
Q ss_pred CCCCccccceEeeeeEEEecCHHHHH-----HHHHHHHHHH--HcCCceEEcChhhHHHhCCCCccCCcceEEEeCCCce
Q 011027 161 GLDPLQVIGWKQTGSLLIGRTPEELV-----MLKERVKQLC--EAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQ 233 (495)
Q Consensus 161 ~~~~~~~~~~~~~g~l~~~~~~~~~~-----~~~~~~~~~~--~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~ 233 (495)
+ ......+.......... .....++.+. ....+.++++.+++.+.+|.+......+++++++ ++
T Consensus 96 -------l-~~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~l~~~~~~gg~~~~d-g~ 166 (561)
T 3da1_A 96 -------V-TTPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPLLRKENLKGGGIYVE-YR 166 (561)
T ss_dssp -------T-CEEEEEEEEECC---------------------------CEEECHHHHHHHCTTSCCTTCCEEEEEEE-EE
T ss_pred -------h-ccccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCccCChhhceeEEEecC-ce
Confidence 0 11111111111100000 0001111111 1133577899999999999887555667777774 59
Q ss_pred ecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCC---C--eeeecCeEEEccCcchHHHHHHhh
Q 011027 234 LDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK---N--TLYSKKAIVVAAGCWSGSLMHDLL 308 (495)
Q Consensus 234 ~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~---g--~~~~a~~VV~A~G~~s~~l~~~l~ 308 (495)
++|.+++..|.+.+.+.| +.++++++|++|..+ ++++++|.+.+ | ..+.+|.||+|+|+|+..|.+.+.
T Consensus 167 vd~~~l~~~L~~~a~~~G----~~i~~~~~V~~l~~~--~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g 240 (561)
T 3da1_A 167 TDDARLTLEIMKEAVARG----AVALNYMKVESFIYD--QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDR 240 (561)
T ss_dssp CCHHHHHHHHHHHHHHTT----CEEEESEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTT
T ss_pred EcHHHHHHHHHHHHHHcC----CEEEcCCEEEEEEEc--CCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcC
Confidence 999999999999998876 689999999999986 67788887643 3 355679999999999999887641
Q ss_pred hccccccccceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEecccccc-
Q 011027 309 RETEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSSRQF- 387 (495)
Q Consensus 309 ~~~~~~~~~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG~t~~~- 387 (495)
.....++.|.||+++.++.... .....+. ...+ .+++. +++. |. +|.++||+|.+.
T Consensus 241 ----~~~~~~v~p~kG~~lvl~~~~~-~~~~~~~----~~~~---------~dgr~--v~~i--P~-~g~~~iGtT~~~~ 297 (561)
T 3da1_A 241 ----SKHGKYLKLSKGVHLVVDQSRF-PLRQAVY----FDTE---------SDGRM--IFAI--PR-EGKTYIGTTDTFY 297 (561)
T ss_dssp ----CCCSSEEEEEEEEEEEEEGGGS-CCSSEEE----ECCS---------SSCCC--EEEE--EE-TTEEEECCCCEEE
T ss_pred ----CCCCceEEeccEEEEEECCccC-CCceEEE----eccC---------CCCcE--EEEE--ec-CCCEEEcCCCCcc
Confidence 1123689999999999875321 1221111 1000 01111 1222 43 678999999753
Q ss_pred --cCCCccccHHHHHHHHHHHHhhcCCcc--cccccccccCceeeeeeccCCCC---------CCcEEeecCCCCcEEEE
Q 011027 388 --AGFNTEVEQTIIDRIWKRAAEFYPKLR--DLCLADFISNRKVRIGLRPYMPD---------GKPVIGPVPGLSKVFLA 454 (495)
Q Consensus 388 --~~~~~~~~~~~~~~~~~~l~~~~p~l~--~~~~~~~~~~~~~~~g~r~~t~D---------~~Piig~~~~~~~l~~~ 454 (495)
+..+..++.++.+.+++.+.++||.+. ...+. ..|+|+||.++| +..+|... .+|++.+
T Consensus 298 ~~~~~~~~~t~~~i~~ll~~~~~~~P~l~~~~~~v~------~~~aGlRPl~~~~~~~~~~~sR~~~i~~~--~~gli~i 369 (561)
T 3da1_A 298 DKDIASPRMTVEDRDYILAAANYMFPSLRLTADDVE------SSWAGLRPLIHEEGKKASEISRKDEIFFS--DSGLISI 369 (561)
T ss_dssp CSCTTCCCCCHHHHHHHHHHHHHHCTTCCCCTTTEE------EEEEEEEEEEEC-----------CCEEEC--SSCCEEE
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHhCCCCCCChhhEE------EEeEEeccccCCCCCCccccccceEEEec--CCCeEEE
Confidence 234677889999999999999999875 32232 369999999754 12223222 3788777
Q ss_pred ecCCCCChhhhHHHHHHHHHHHh
Q 011027 455 TGHEGLGLSLALGTAELVADMVL 477 (495)
Q Consensus 455 ~G~g~~G~~~ap~~a~~la~~i~ 477 (495)
+|. . +++++.+||.+++++.
T Consensus 370 ~Gg--k-~Tt~r~mAe~~~d~~~ 389 (561)
T 3da1_A 370 AGG--K-LTGYRKMAERTVDAVA 389 (561)
T ss_dssp CCC--C-STTHHHHHHHHHHHHH
T ss_pred eCC--h-hhhHHHHHHHHHHHHH
Confidence 764 4 9999999999999886
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.69 E-value=1.7e-15 Score=151.81 Aligned_cols=203 Identities=13% Similarity=0.070 Sum_probs=110.3
Q ss_pred CceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEc---CCCeeeecCeEEEccCcchHHHHHHh
Q 011027 231 DSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT---SKNTLYSKKAIVVAAGCWSGSLMHDL 307 (495)
Q Consensus 231 ~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~---~~g~~~~a~~VV~A~G~~s~~l~~~l 307 (495)
+..++...+.+.|.+.+++.| ++++++++|+++..+ ++++.+|.+ .++..+.+|.||.|+|.++ .+...+
T Consensus 96 ~~~~~~~~l~~~L~~~~~~~g----v~i~~~~~v~~i~~~--~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s-~~~~~~ 168 (397)
T 3cgv_A 96 GYVLERDKFDKHLAALAAKAG----ADVWVKSPALGVIKE--NGKVAGAKIRHNNEIVDVRAKMVIAADGFES-EFGRWA 168 (397)
T ss_dssp EEEECHHHHHHHHHHHHHHHT----CEEESSCCEEEEEEE--TTEEEEEEEEETTEEEEEEEEEEEECCCTTC-HHHHHH
T ss_pred eEEEeHHHHHHHHHHHHHhCC----CEEEECCEEEEEEEe--CCEEEEEEEEECCeEEEEEcCEEEECCCcch-HhHHhc
Confidence 346778889999999888866 689999999999886 565655665 3455667899999999998 454543
Q ss_pred hhcccccccc-ceeec---ceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEecc
Q 011027 308 LRETEIVLDI-PVKPR---KGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383 (495)
Q Consensus 308 ~~~~~~~~~~-~l~~~---rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG~ 383 (495)
+... +..+. .+....+.... ........ +... + .... +.+..|..++...+|.
T Consensus 169 ------g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~--~---------~~~g--~~~~~P~~~~~~~vg~ 225 (397)
T 3cgv_A 169 ------GLKSVILARNDIISALQYRMINVD-VDPDYTDF---YLGS--I---------APAG--YIWVFPKGEGMANVGI 225 (397)
T ss_dssp ------TCCTTCCCGGGEEEEEEEEEESCC-CCTTEEEE---ECST--T---------STTE--EEEEEEEETTEEEEEE
T ss_pred ------CCCccCCChhheeEEEEEEeccCC-CCCCcEEE---EeCC--c---------CCCc--eEEEEECCCCeEEEEE
Confidence 2222 21111 12222222111 11110000 0000 0 0111 1233355566777776
Q ss_pred cccccCCCccccHHHHHHHHHHHHhhcCCcccccccccccCceeeeeeccCC-------CCCCcEEeecCCCCcEEEEec
Q 011027 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM-------PDGKPVIGPVPGLSKVFLATG 456 (495)
Q Consensus 384 t~~~~~~~~~~~~~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~~t-------~D~~Piig~~~~~~~l~~~~G 456 (495)
+...... ......+..++.+.+.+|.+....+.. .+.+..|++ .++..++|.. ......
T Consensus 226 ~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~p~~~~~~~~~~~~v~liGDA-----a~~~~P 291 (397)
T 3cgv_A 226 GSSINWI---HNRFELKNYLDRFIENHPGLKKGQDIQ------LVTGGVSVSKVKMPITMPGLMLVGDA-----ARLIDP 291 (397)
T ss_dssp EEETTTC---SCHHHHHHHHHHHHHTCHHHHTSEEEE------EEEEEEECCCCCSCCEETTEEECGGG-----GTCSCT
T ss_pred Eeccccc---cCCCCHHHHHHHHHHhCcCCCCCeEEe------eeeeeeecCCCccceeeCCEEEEEcc-----ccCCCC
Confidence 5543321 122334444455444455443333322 355655542 3444445432 223356
Q ss_pred CCCCChhhhHHHHHHHHHHHh
Q 011027 457 HEGLGLSLALGTAELVADMVL 477 (495)
Q Consensus 457 ~g~~G~~~ap~~a~~la~~i~ 477 (495)
++|.|+.+|...|..|++.|.
T Consensus 292 ~~G~G~~~a~~~a~~la~~l~ 312 (397)
T 3cgv_A 292 ITGGGIANAIVSGMYAAQVTK 312 (397)
T ss_dssp TTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH
Confidence 789999999998888887764
No 21
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.62 E-value=1.4e-14 Score=146.34 Aligned_cols=209 Identities=11% Similarity=0.001 Sum_probs=113.1
Q ss_pred CceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCe--eeecCeEEEccCcchHHHHHHhh
Q 011027 231 DSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT--LYSKKAIVVAAGCWSGSLMHDLL 308 (495)
Q Consensus 231 ~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~--~~~a~~VV~A~G~~s~~l~~~l~ 308 (495)
+..+++..+.+.|.+.+++.| ++++++++|+++..++ ++..+.+.+.+|+ .+.+|.||.|+|.++ .+.+.+
T Consensus 100 ~~~~~r~~~~~~L~~~a~~~g----v~i~~~~~v~~i~~~~-~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s-~l~~~~- 172 (421)
T 3nix_A 100 TWQVPRGNFDKTLADEAARQG----VDVEYEVGVTDIKFFG-TDSVTTIEDINGNKREIEARFIIDASGYGR-VIPRMF- 172 (421)
T ss_dssp EEECCHHHHHHHHHHHHHHHT----CEEECSEEEEEEEEET-TEEEEEEEETTSCEEEEEEEEEEECCGGGC-HHHHHT-
T ss_pred eeEECHHHHHHHHHHHHHhCC----CEEEcCCEEEEEEEeC-CEEEEEEEcCCCCEEEEEcCEEEECCCCch-hhHHhc-
Confidence 346888899999999888876 6899999999998762 3334567778886 566799999999987 444433
Q ss_pred hccccccccceeecceeEEEEeecCccc---c--ccccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEecc
Q 011027 309 RETEIVLDIPVKPRKGHLLVLENFNSLK---L--NHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGS 383 (495)
Q Consensus 309 ~~~~~~~~~~l~~~rgq~~~~~~~~~~~---~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG~ 383 (495)
+.+.+......+.+......... . ..... +. .+ ... ..+.+..|..++...+|.
T Consensus 173 -----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~----------~~~--~g~~~~~P~~~~~~~vg~ 231 (421)
T 3nix_A 173 -----GLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRI---TA-VV----------HKP--KVWIWVIPFSNGNTSVGF 231 (421)
T ss_dssp -----TCEECCSSCCCEEEEEEEECTTCCC----CCSEE---EE-EE----------EET--TEEEEEEECTTSEEEEEE
T ss_pred -----CCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEE---EE-Ee----------CCC--CEEEEEEEECCCCEEEEE
Confidence 23333333333333322111100 0 00000 00 00 000 112233355666766766
Q ss_pred cccccCCCccccHHHHHHHHHHHHhhcCCccc----ccccccccCceeeee----eccCCCCCCcEEeecCCCCcEEEEe
Q 011027 384 SRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRD----LCLADFISNRKVRIG----LRPYMPDGKPVIGPVPGLSKVFLAT 455 (495)
Q Consensus 384 t~~~~~~~~~~~~~~~~~~~~~l~~~~p~l~~----~~~~~~~~~~~~~~g----~r~~t~D~~Piig~~~~~~~l~~~~ 455 (495)
.......+... ...+..++.+.+.+|.+.. ...... ...+.+ .+.+..|+.+++|.. .....
T Consensus 232 ~~~~~~~~~~~--~~~~~~l~~~~~~~p~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~v~lvGDA-----a~~~~ 301 (421)
T 3nix_A 232 VGEPSYFDEYT--GTPEERMRAMIANEGHIAERFKSEEFLFE---PRTIEGYAISASKLYGDGFVLTGNA-----TEFLD 301 (421)
T ss_dssp EECHHHHTTSC--SCHHHHHHHHHHTCTTTHHHHTTCCBSSC---CEEEECCCBEESCSEETTEEECGGG-----TCBCC
T ss_pred EecHHHhhhcC--CCHHHHHHHHHHhCcHHHHHHhcCccccC---ceeecccceeeeeeccCCEEEeccc-----ccccC
Confidence 54322111100 1222334444444554421 111100 011211 234456888888864 23345
Q ss_pred cCCCCChhhhHHHHHHHHHHHh
Q 011027 456 GHEGLGLSLALGTAELVADMVL 477 (495)
Q Consensus 456 G~g~~G~~~ap~~a~~la~~i~ 477 (495)
.+.|.|+.+|...|..+++.|.
T Consensus 302 P~~G~G~~~A~~~a~~la~~l~ 323 (421)
T 3nix_A 302 PIFSSGATFAMESGSKGGKLAV 323 (421)
T ss_dssp STTCCHHHHHHHHHHHHHHHHH
T ss_pred CcccccHHHHHHHHHHHHHHHH
Confidence 6789999999999999998885
No 22
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.59 E-value=1.1e-13 Score=139.88 Aligned_cols=71 Identities=10% Similarity=0.057 Sum_probs=55.3
Q ss_pred eEEEeCCCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH-H
Q 011027 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG-S 302 (495)
Q Consensus 224 ~~~~~~~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~-~ 302 (495)
++.+++.+| ...+++.|.+.+++.| ++++++++|++|..+ ++++.+|.+. |..+.+|.||+|++++.. .
T Consensus 186 ~~~~~~~gG---~~~l~~~l~~~~~~~G----~~i~~~~~V~~i~~~--~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 186 GGTGIPEGG---CKGIIDALETVISANG----GKIHTGQEVSKILIE--NGKAAGIIAD-DRIHDADLVISNLGHAATAV 255 (425)
T ss_dssp CSCEEETTS---HHHHHHHHHHHHHHTT----CEEECSCCEEEEEEE--TTEEEEEEET-TEEEECSEEEECSCHHHHHH
T ss_pred CCccccCCC---HHHHHHHHHHHHHHcC----CEEEECCceeEEEEE--CCEEEEEEEC-CEEEECCEEEECCCHHHHHH
Confidence 456677776 3678899998888876 599999999999986 5666668776 666678999999999764 4
Q ss_pred HH
Q 011027 303 LM 304 (495)
Q Consensus 303 l~ 304 (495)
|+
T Consensus 256 ll 257 (425)
T 3ka7_A 256 LC 257 (425)
T ss_dssp HT
T ss_pred hc
Confidence 44
No 23
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.57 E-value=6.5e-14 Score=146.62 Aligned_cols=71 Identities=11% Similarity=-0.001 Sum_probs=55.3
Q ss_pred CCCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcC-CC--eeeecCeEEEccCcchHHHHH
Q 011027 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS-KN--TLYSKKAIVVAAGCWSGSLMH 305 (495)
Q Consensus 229 ~~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~-~g--~~~~a~~VV~A~G~~s~~l~~ 305 (495)
+.+..+++..+.+.|.+.+++.| ++++++++|+++..+ +++++.|.+. +| ..+.+|.||.|+|.++. +.+
T Consensus 120 ~~~~~v~r~~l~~~L~~~a~~~G----v~i~~g~~V~~v~~~--~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~-lr~ 192 (591)
T 3i3l_A 120 DHAVQVKREEFDKLLLDEARSRG----ITVHEETPVTDVDLS--DPDRVVLTVRRGGESVTVESDFVIDAGGSGGP-ISR 192 (591)
T ss_dssp SCEEECCHHHHHHHHHHHHHHTT----CEEETTCCEEEEECC--STTCEEEEEEETTEEEEEEESEEEECCGGGCH-HHH
T ss_pred CeeEEEcHHHHHHHHHHHHHhCC----CEEEeCCEEEEEEEc--CCCEEEEEEecCCceEEEEcCEEEECCCCcch-hHH
Confidence 44567888899999999888765 689999999999875 4556778776 66 45677999999999774 434
Q ss_pred H
Q 011027 306 D 306 (495)
Q Consensus 306 ~ 306 (495)
.
T Consensus 193 ~ 193 (591)
T 3i3l_A 193 K 193 (591)
T ss_dssp H
T ss_pred H
Confidence 3
No 24
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.51 E-value=3.4e-13 Score=141.37 Aligned_cols=182 Identities=15% Similarity=0.145 Sum_probs=116.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcccCCcceeeeccCCCCchHHHH-H--HHHHHHHHHHHHH
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDL-A--LRSNKLWKMLADS 156 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS~~~~g~i~~~~~~~~~~~~~l-~--~~~~~~~~~~~~~ 156 (495)
.++||+|||||++|+++|+.|+ ++|.+|+||||.....|+|..++|.++.... ...+. . ....+++..+...
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la-~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~----~~~~~~g~~ds~~~~~~~~~~~ 194 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAK-KAGANVILVDKAPFSGGNSMISAGGMNAVGT----KQQTAHGVEDKVEWFIEDAMKG 194 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH-HHTCCEEEECSSSSSCTTGGGCCSCEECSSC----HHHHHTTCCCCHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHH-HCCCcEEEEeCCCCCCCcccccCceeEccCC----HHHHHhCCCCCHHHHHHHHHHh
Confidence 4689999999999999999998 4899999999998778888888887764321 11000 0 0001222222211
Q ss_pred HHhcCCCCccccceEeeeeEEEecCHHHH----HHHHHHHHHHHHcCCceEEcChhhHHHhCCCCccCCcceEEEeCCCc
Q 011027 157 LRDQGLDPLQVIGWKQTGSLLIGRTPEEL----VMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDS 232 (495)
Q Consensus 157 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g 232 (495)
+. +. .++... +...+.++++.+.|+++..+. .++ .......+.+.++
T Consensus 195 ----~~-------~~--------~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~------~~~----g~~~~r~~~~~~~ 245 (566)
T 1qo8_A 195 ----GR-------QQ--------NDIKLVTILAEQSADGVQWLESLGANLDDLK------RSG----GARVDRTHRPHGG 245 (566)
T ss_dssp ----TT-------TC--------SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEE------CCT----TCSSCCEEECSSS
T ss_pred ----cC-------CC--------CCHHHHHHHHhccHHHHHHHHhcCCcccccc------ccC----CCCCCceeecCCC
Confidence 00 00 011111 112233455566676653321 011 1122334567777
Q ss_pred eecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCC-CcEEEEEcC--CCe--eeecCeEEEccCcchH
Q 011027 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST-GEVEAVQTS--KNT--LYSKKAIVVAAGCWSG 301 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~-~~~~~v~~~--~g~--~~~a~~VV~A~G~~s~ 301 (495)
.+++..+++.|.+.+++.| ++++++++|++|..+ + +++++|.+. +|+ .+.+|.||+|+|.++.
T Consensus 246 ~~~~~~l~~~L~~~~~~~g----v~i~~~~~v~~l~~~--~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 246 KSSGPEIIDTLRKAAKEQG----IDTRLNSRVVKLVVN--DDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp SCHHHHHHHHHHHHHHHTT----CCEECSEEEEEEEEC--TTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred CCCHHHHHHHHHHHHHhcC----CEEEeCCEEEEEEEC--CCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 7888899999999988876 799999999999876 4 777776654 664 4567999999999885
No 25
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.47 E-value=5.9e-13 Score=138.00 Aligned_cols=202 Identities=12% Similarity=0.001 Sum_probs=111.5
Q ss_pred CCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHHhhh
Q 011027 230 YDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLR 309 (495)
Q Consensus 230 ~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~l~~ 309 (495)
.+..+++..+.+.|.+.+++.| ++++++ +|+++..++ ++.++.|.+.+|+.+.+|.||.|+|.++..+...+
T Consensus 166 ~~~~~~~~~l~~~L~~~a~~~g----v~~~~~-~v~~i~~~~-~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~-- 237 (511)
T 2weu_A 166 YAYHFDADEVARYLSEYAIARG----VRHVVD-DVQHVGQDE-RGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTL-- 237 (511)
T ss_dssp CEEEECHHHHHHHHHHHHHHTT----CEEEEC-CEEEEEECT-TSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCT--
T ss_pred eeEEEcHHHHHHHHHHHHHHCC----CEEEEC-eEeEEEEcC-CCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHh--
Confidence 3457889999999999888765 688888 999998742 45677888888876778999999999876432222
Q ss_pred cccccccc----ceeecceeEE-EEeecCccccccccccccccccccCCCCCCCcccccceeeeeeeeeeccccEEeccc
Q 011027 310 ETEIVLDI----PVKPRKGHLL-VLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMTATTDVIGNLVLGSS 384 (495)
Q Consensus 310 ~~~~~~~~----~l~~~rgq~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~iG~t 384 (495)
+... +..+....+. .++............. .. .... +++..|..+ +..+|..
T Consensus 238 ----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------------~~~g---~~~~~P~~~-~~~~g~~ 294 (511)
T 2weu_A 238 ----GGRFQSFSDVLPNNRAVALRVPRENDEDMRPYTTA--TA-------------MSAG---WMWTIPLFK-RDGNGYV 294 (511)
T ss_dssp ----CCCEEECTTTCCCCEEEEEEEECSSGGGCCSSEEE--EE-------------ETTE---EEEEEECSS-EEEEEEE
T ss_pred ----CCCCccccccCcccceEEEEeccCCCCCCCcceec--ee-------------cCCC---cEEEEECCC-ceEEEEE
Confidence 1111 1223332222 2221111000000000 00 0000 112223322 4555543
Q ss_pred ccccCCCccccHHHH-HHHHHHHHhhcCCcccccccccccCceeeeeeccCC-CCCCcEEeecCCCCcEEEEecCCCCCh
Q 011027 385 RQFAGFNTEVEQTII-DRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYM-PDGKPVIGPVPGLSKVFLATGHEGLGL 462 (495)
Q Consensus 385 ~~~~~~~~~~~~~~~-~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~~t-~D~~Piig~~~~~~~l~~~~G~g~~G~ 462 (495)
+... ..+.++. +.+.+.+ ...|.+...... ..|.+.++.. .++.++||.. -.....+.|.|+
T Consensus 295 ~~~~----~~~~~~~~~~l~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~rv~liGDA-----Ah~~~P~~g~G~ 358 (511)
T 2weu_A 295 YSDE----FISPEEAERELRSTV-APGRDDLEANHI------QMRIGRNERTWINNCVAVGLS-----AAFVEPLESTGI 358 (511)
T ss_dssp ECTT----TSCHHHHHHHHHHHH-CTTCTTSCCEEE------ECCCEEESCSEETTEEECGGG-----TEECCGGGCCHH
T ss_pred ECCC----CCCHHHHHHHHHHHh-CcccccccceeE------EeeccccccccCCCEEEEech-----hhccCccccccH
Confidence 3211 1122222 2333332 222333222111 1356766654 4888888864 345567889999
Q ss_pred hhhHHHHHHHHHHHhC
Q 011027 463 SLALGTAELVADMVLT 478 (495)
Q Consensus 463 ~~ap~~a~~la~~i~g 478 (495)
.+|+..|..|+++|.+
T Consensus 359 ~~a~~da~~La~~l~~ 374 (511)
T 2weu_A 359 FFIQHAIEQLVKHFPG 374 (511)
T ss_dssp HHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999999874
No 26
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.47 E-value=1.1e-12 Score=137.68 Aligned_cols=182 Identities=15% Similarity=0.159 Sum_probs=113.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcccCCcceeeeccCCCCchHH-HHH-HHH-HHHHHHHHHHH
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIW-DLA-LRS-NKLWKMLADSL 157 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS~~~~g~i~~~~~~~~~~~~-~l~-~~~-~~~~~~~~~~~ 157 (495)
++||+|||||++|+++|+.|+ ++|.+|+||||.....|.|..++|.++.... ... ++. ..+ ..++.++...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la-~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~----~~~~~~g~~ds~~~~~~~~~~~- 199 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISAT-DSGAKVILIEKEPVIGGNAKLAAGGMNAAWT----DQQKAKKITDSPELMFEDTMKG- 199 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSSSCTTGGGCCSCEECSSC----HHHHHTTCCCCHHHHHHHHHHH-
T ss_pred CCCEEEECCCHHHHHHHHHHH-HCCCcEEEEeCCCCCCCchhhcCceEEeCCC----HHHHHhCCCCCHHHHHHHHHHh-
Confidence 689999999999999999998 5999999999987777888777776654321 110 000 000 1112222111
Q ss_pred HhcCCCCccccceEeeeeEEEecCHHHH----HHHHHHHHHHHHcCCceEEcChhhHHHhCCCCccCCcceEEEeCCCce
Q 011027 158 RDQGLDPLQVIGWKQTGSLLIGRTPEEL----VMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQ 233 (495)
Q Consensus 158 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~ 233 (495)
+. +. .++... +.....++++.+.|+++..+. ..+ .......+.+.++.
T Consensus 200 ---g~-------~~--------~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~----g~~~~r~~~~~~g~ 251 (571)
T 1y0p_A 200 ---GQ-------NI--------NDPALVKVLSSHSKDSVDWMTAMGADLTDVG------MMG----GASVNRAHRPTGGA 251 (571)
T ss_dssp ---TT-------TC--------SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEE------CCT----TCSSCCEEESTTTC
T ss_pred ---cC-------CC--------CCHHHHHHHHHccHHHHHHHHhcCCCCccCc------ccC----CcCCCeeEecCCCC
Confidence 00 00 011111 111233445555666543210 011 11223456666677
Q ss_pred ecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcC--CCe--eeecCeEEEccCcchH
Q 011027 234 LDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS--KNT--LYSKKAIVVAAGCWSG 301 (495)
Q Consensus 234 ~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~--~g~--~~~a~~VV~A~G~~s~ 301 (495)
..+..+++.|.+.+++.| ++++++++|++|..++ ++++++|.+. +|+ .+.+|.||+|+|.++.
T Consensus 252 ~~g~~l~~~L~~~~~~~g----v~i~~~~~v~~l~~~~-~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 252 GVGAHVVQVLYDNAVKRN----IDLRMNTRGIEVLKDD-KGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp CHHHHHHHHHHHHHHHTT----CEEESSEEEEEEEECT-TSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CCHHHHHHHHHHHHHhcC----CEEEeCCEeeEeEEcC-CCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 788899999999988875 7999999999998762 2677766654 564 4667999999999875
No 27
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.47 E-value=5.3e-12 Score=128.71 Aligned_cols=64 Identities=17% Similarity=0.058 Sum_probs=49.8
Q ss_pred ceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcC---CCe--eeecCeEEEccCcchH
Q 011027 232 SQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS---KNT--LYSKKAIVVAAGCWSG 301 (495)
Q Consensus 232 g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~---~g~--~~~a~~VV~A~G~~s~ 301 (495)
..++...+.+.|.+.+.+.| ++++++++|+++..+ ++++++|++. +|+ .+.+|.||.|+|.++.
T Consensus 95 ~~i~r~~l~~~L~~~a~~~g----v~i~~~~~v~~i~~~--~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 95 FELNAPLYNQRVLKEAQDRG----VEIWDLTTAMKPIFE--DGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp EEECHHHHHHHHHHHHHHTT----CEEESSEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred EEEcHHHHHHHHHHHHHHcC----CEEEeCcEEEEEEEE--CCEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 35677789999998887765 689999999999876 5566555543 664 6678999999999875
No 28
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.46 E-value=6.6e-11 Score=117.93 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=46.7
Q ss_pred eecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcC-CC--eeeecCeEEEccCcchH
Q 011027 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS-KN--TLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~-~g--~~~~a~~VV~A~G~~s~ 301 (495)
.++-..+.+.|.+.+.+.| +.++++++|+++..+ ++++..+... ++ ..+.+|.||.|.|..+.
T Consensus 98 ~i~R~~~~~~L~~~a~~~G----~~~~~~~~v~~~~~~--~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~ 163 (397)
T 3oz2_A 98 VLERDKFDKHLAALAAKAG----ADVWVKSPALGVIKE--NGKVAGAKIRHNNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp EECHHHHHHHHHHHHHHHT----CEEESSCCEEEEEEE--TTEEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred EEEHHHHHHHHHHHHHhcC----cEEeeeeeeeeeeec--cceeeeeeecccccceEEEEeEEEeCCccccH
Confidence 4566678888888888876 589999999998876 5656555432 23 34567999999998765
No 29
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.42 E-value=2.8e-12 Score=135.69 Aligned_cols=188 Identities=13% Similarity=0.070 Sum_probs=105.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcccCCcceeeeccCC-----CCchHHHHHHHHHHHHHHHHH
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRT-----PGSEIWDLALRSNKLWKMLAD 155 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS~~~~g~i~~~~~~-----~~~~~~~l~~~~~~~~~~~~~ 155 (495)
++||||||||++|+++|++|+ +.|.+|+||||..+..|.|..++|.+...... .++... ++.+...
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aa-e~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~--------~~~dt~~ 75 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQ-QKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDL--------HFMDTVK 75 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHH-TTTCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHH--------HHHHHHH
T ss_pred cccEEEECchHHHHHHHHHHH-HCCCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHH--------HHHHHHH
Confidence 689999999999999999998 58999999999877656665555444332222 222111 1111111
Q ss_pred HHHhcCCCCccccceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCce-----------------EEcChhhHHHhCCCCc
Q 011027 156 SLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRA-----------------EYLSSSDLLQAEPELM 218 (495)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~-----------------~~~~~~~~~~~~p~l~ 218 (495)
. .... ++.. .+ ..-.+...+.++.+.+.|+++ ++++++++.++..
T Consensus 76 ~---g~~~----~d~~---~v-----~~~~~~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~--- 137 (660)
T 2bs2_A 76 G---SDWG----CDQK---VA-----RMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIH--- 137 (660)
T ss_dssp H---TTTC----SCHH---HH-----HHHHHHHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBC---
T ss_pred h---cCCC----CCHH---HH-----HHHHHHHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhc---
Confidence 0 0000 0000 00 000011112233344445443 3344444443221
Q ss_pred cCCcceEEEeCCC---ceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEc---CCCe--eeecC
Q 011027 219 VGEDSRAAFLPYD---SQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT---SKNT--LYSKK 290 (495)
Q Consensus 219 ~~~~~~~~~~~~~---g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~---~~g~--~~~a~ 290 (495)
....+|...+.. +...+..++..|.+.+.+.| ++++++++|++|..+ ++++.+|.. .+|+ .+.++
T Consensus 138 -~~~~gg~~~~R~~~~~d~tG~~l~~~L~~~a~~~g----v~i~~~~~v~~L~~~--~g~v~Gv~~~~~~~G~~~~i~A~ 210 (660)
T 2bs2_A 138 -SRDFGGTKKWRTCYTADATGHTMLFAVANECLKLG----VSIQDRKEAIALIHQ--DGKCYGAVVRDLVTGDIIAYVAK 210 (660)
T ss_dssp -CBCCTTCSSCCEECSTTCHHHHHHHHHHHHHHHHT----CEEECSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEECS
T ss_pred -cccccccccceeEeeCCCCHHHHHHHHHHHHHhCC----CEEEECcEEEEEEec--CCEEEEEEEEECCCCcEEEEEcC
Confidence 111122222211 11225678899998888765 799999999999875 566766653 5665 36679
Q ss_pred eEEEccCcchHH
Q 011027 291 AIVVAAGCWSGS 302 (495)
Q Consensus 291 ~VV~A~G~~s~~ 302 (495)
.||+|||.++..
T Consensus 211 ~VVlATGG~~~~ 222 (660)
T 2bs2_A 211 GTLIATGGYGRI 222 (660)
T ss_dssp EEEECCCCCGGG
T ss_pred EEEEccCcchhh
Confidence 999999998754
No 30
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.42 E-value=5e-12 Score=127.08 Aligned_cols=61 Identities=11% Similarity=-0.035 Sum_probs=48.9
Q ss_pred ceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 232 SQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 232 g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
..++...+.+.|.+.+.+ +.++++++|+++..+ ++ .+.|++.+|+.+.+|.||.|.|.++.
T Consensus 122 ~~i~r~~l~~~L~~~~~~------~~i~~~~~v~~i~~~--~~-~v~v~~~~g~~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 122 CPVSRAELQREMLDYWGR------DSVQFGKRVTRCEED--AD-GVTVWFTDGSSASGDLLIAADGSHSA 182 (407)
T ss_dssp EEEEHHHHHHHHHHHHCG------GGEEESCCEEEEEEE--TT-EEEEEETTSCEEEESEEEECCCTTCS
T ss_pred EEEEHHHHHHHHHHhCCc------CEEEECCEEEEEEec--CC-cEEEEEcCCCEEeeCEEEECCCcChH
Confidence 346677888999888765 378899999999886 33 46788888887778999999999875
No 31
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.42 E-value=2.2e-13 Score=140.96 Aligned_cols=193 Identities=17% Similarity=0.227 Sum_probs=106.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcccCCcceeeeccCCCCchHHH-HH-HHH-HHHHHHHHHH
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWD-LA-LRS-NKLWKMLADS 156 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS~~~~g~i~~~~~~~~~~~~~-l~-~~~-~~~~~~~~~~ 156 (495)
.++||||||||++|+++|+.|+ ++|.+|+||||.....|+|..++|.++..... ...+ +. ..+ ..+++.+...
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa-~~G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~---~~~~~~g~~ds~~~~~~~~~~~ 115 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAA-RAGADVLVLERTSGWGGATALAGGFIYLGGGT---PLQKACGFDDSPENMKTFMMAA 115 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSSSCTTGGGSCCCEECCSSC---HHHHHTTCCCCHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHH-HCCCcEEEEeCCCCCCCcchhcCcceecCCCC---HHHHHhCCCCCHHHHHHHHHHH
Confidence 4689999999999999999998 48999999999988888888888877643211 0100 00 000 1111222111
Q ss_pred HHhcCCCCccccceEeeeeEEEecCHHHH----HHHHHHHHHHHHcCCceEEc--Chh---------------hHHHhCC
Q 011027 157 LRDQGLDPLQVIGWKQTGSLLIGRTPEEL----VMLKERVKQLCEAGLRAEYL--SSS---------------DLLQAEP 215 (495)
Q Consensus 157 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~--~~~---------------~~~~~~p 215 (495)
. . .. .++... +...+.++.+.+.|+++... ... +....++
T Consensus 116 ~---~--------~~--------~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~ 176 (510)
T 4at0_A 116 L---G--------PG--------ADEEKITDYCEGSVEHYNWLVDCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFN 176 (510)
T ss_dssp S---C--------SS--------CCHHHHHHHHHTHHHHHHHHHHTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGG
T ss_pred h---C--------CC--------CCHHHHHHHHHhhHHHHHHHHHcCCeecccccCCcccccCCcccccccCcccccccc
Confidence 0 0 00 001101 11112334455556543211 000 0000000
Q ss_pred CCccCCcceEEEeCC----CceecHH-HHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCC-Ce--ee
Q 011027 216 ELMVGEDSRAAFLPY----DSQLDAM-LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK-NT--LY 287 (495)
Q Consensus 216 ~l~~~~~~~~~~~~~----~g~~~p~-~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~-g~--~~ 287 (495)
.+. .....+...+. .+..... .+++.|.+.+++.| ++++++++|++|..++ ++++++|.+.+ +. .+
T Consensus 177 ~~~-~~~~r~~~~~~~~~~~g~~~g~~~l~~~L~~~~~~~G----v~i~~~t~v~~L~~~~-~g~v~GV~~~~~g~~~~i 250 (510)
T 4at0_A 177 EIA-APAPRGHVPQMDGKRTGEKGGGYMLMKPLVETAEKLG----VRAEYDMRVQTLVTDD-TGRVVGIVAKQYGKEVAV 250 (510)
T ss_dssp GTS-CCCCCEECCCCSSCBTTTBCTTHHHHHHHHHHHHHTT----CEEECSEEEEEEEECT-TCCEEEEEEEETTEEEEE
T ss_pred ccc-CcccceeeecccccccccCCCHHHHHHHHHHHHHHcC----CEEEecCEeEEEEECC-CCcEEEEEEEECCcEEEE
Confidence 000 00000111111 2333444 78899998888875 7999999999998752 46788777543 32 45
Q ss_pred ecC-eEEEccCcchH
Q 011027 288 SKK-AIVVAAGCWSG 301 (495)
Q Consensus 288 ~a~-~VV~A~G~~s~ 301 (495)
.|+ .||+|||.++.
T Consensus 251 ~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 251 RARRGVVLATGSFAY 265 (510)
T ss_dssp EEEEEEEECCCCCTT
T ss_pred EeCCeEEEeCCChhh
Confidence 674 99999999874
No 32
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.39 E-value=2.1e-12 Score=131.43 Aligned_cols=167 Identities=16% Similarity=0.153 Sum_probs=97.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHHh
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRD 159 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (495)
+.+||+|||||++|+++|+.|+ ++|.+|+|||+.....+.+..+++.... +.... .. .++...+..
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la-~~G~~V~llEk~~~~g~~~~~sg~g~~~-~~~~~-~~-----------~~~~~~~~~ 90 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAA-EEGANVLLLDKGNKLGRKLAISGGGRCN-VTNRL-PL-----------DEIVKHIPG 90 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSSSCHHHHHTGGGTCC-CEECS-CH-----------HHHHHTCTB
T ss_pred CCCCEEEECCcHHHHHHHHHHH-HCCCCEEEEECCCCCCceeEEeCCCcee-ccCcc-cH-----------HHHHHHhcc
Confidence 3689999999999999999998 4899999999975433322211111100 00000 00 111111000
Q ss_pred cCCCCccccceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCceEEcChhhHHHhCCCCccCCcceEEEeCCCceecHHHH
Q 011027 160 QGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAMLA 239 (495)
Q Consensus 160 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~~~p~~~ 239 (495)
. ..+.... +. ... ..+..+.+...|+++... ..+..+|... .+..+
T Consensus 91 ~-------~~~~~~~-~~-~~~------~~~~~~~~~~~G~~~~~~-----------------~~g~~~p~~~--~~~~l 136 (447)
T 2i0z_A 91 N-------GRFLYSA-FS-IFN------NEDIITFFENLGVKLKEE-----------------DHGRMFPVSN--KAQSV 136 (447)
T ss_dssp T-------GGGGHHH-HH-HSC------HHHHHHHHHHTTCCEEEC-----------------GGGEEEETTC--CHHHH
T ss_pred C-------hHHHHHH-HH-hcC------HHHHHHHHHhcCCceEEe-----------------eCCEEECCCC--CHHHH
Confidence 0 0000000 00 000 012233344556554321 1122233221 35678
Q ss_pred HHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch
Q 011027 240 VAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 240 ~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s 300 (495)
++.|.+.+++.| ++++++++|+++..+ +++++.|.+.+|+.+.+|.||+|+|.++
T Consensus 137 ~~~L~~~~~~~G----V~i~~~~~V~~i~~~--~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 137 VDALLTRLKDLG----VKIRTNTPVETIEYE--NGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHTT----CEEECSCCEEEEEEE--TTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHCC----CEEEeCcEEEEEEec--CCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 899998888765 799999999999876 5667889998887566799999999998
No 33
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.38 E-value=5.5e-12 Score=129.45 Aligned_cols=228 Identities=13% Similarity=0.010 Sum_probs=119.4
Q ss_pred EEEeCCCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH-HH
Q 011027 225 AAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG-SL 303 (495)
Q Consensus 225 ~~~~~~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~-~l 303 (495)
+++.+.+|. ..+++.|.+.+++.| ++++++++|++|..+ ++++|.|++.++. +.+|+||+|++++.. .|
T Consensus 225 ~~~~~~gG~---~~l~~~l~~~l~~~g----~~i~~~~~V~~i~~~--~~~~~~v~~~~~~-~~ad~vv~a~p~~~~~~l 294 (477)
T 3nks_A 225 SQWSLRGGL---EMLPQALETHLTSRG----VSVLRGQPVCGLSLQ--AEGRWKVSLRDSS-LEADHVISAIPASVLSEL 294 (477)
T ss_dssp SEEEETTCT---THHHHHHHHHHHHTT----CEEECSCCCCEEEEC--GGGCEEEECSSCE-EEESEEEECSCHHHHHHH
T ss_pred cEEEECCCH---HHHHHHHHHHHHhcC----CEEEeCCEEEEEEEc--CCceEEEEECCeE-EEcCEEEECCCHHHHHHh
Confidence 355666664 478888888887765 689999999999875 3445788776554 557999999998754 33
Q ss_pred HHHhhhc-cccccccceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeee--eeee----cc
Q 011027 304 MHDLLRE-TEIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMT--ATTD----VI 376 (495)
Q Consensus 304 ~~~l~~~-~~~~~~~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~ 376 (495)
++..... ...-..++..++.-..+.++.+ . + +....||+..+. .+...+...+. ..+. ++
T Consensus 295 l~~~~~~~~~~l~~~~~~~~~~v~l~~~~~--~-~--~~~~~g~l~~~~--------~~~~~~~~~~~s~~~~~~~~~~~ 361 (477)
T 3nks_A 295 LPAEAAPLARALSAITAVSVAVVNLQYQGA--H-L--PVQGFGHLVPSS--------EDPGVLGIVYDSVAFPEQDGSPP 361 (477)
T ss_dssp SCGGGHHHHHHHHTCCEEEEEEEEEEETTC--C-C--SSCSSEEECCTT--------TCSSEEEEECHHHHCGGGSTTTT
T ss_pred ccccCHHHHHHHhcCCCCcEEEEEEEECCC--C-C--CCCCceEEccCC--------CCCCceEEEEeccccCCCCCCCC
Confidence 3221000 0000012333332222223221 1 1 111224432110 00001111000 0010 01
Q ss_pred cc---EEecccccc---cCCCccccHHHHHHHHHHHHhhcCCcccccccccccCcee-eeeeccCCCCCCcEEeecCC--
Q 011027 377 GN---LVLGSSRQF---AGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKV-RIGLRPYMPDGKPVIGPVPG-- 447 (495)
Q Consensus 377 g~---~~iG~t~~~---~~~~~~~~~~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~-~~g~r~~t~D~~Piig~~~~-- 447 (495)
.. +.+|+.... +......+++..+..++.+.++|+.... .. .. ..+. +.++-.+++++.+.++.+..
T Consensus 362 ~~~l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~-~~-~~--~v~rw~~a~p~~~~g~~~~~~~~~~~l 437 (477)
T 3nks_A 362 GLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEM-PS-HC--LVHLHKNCIPQYTLGHWQKLESARQFL 437 (477)
T ss_dssp CEEEEEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCSC-CS-EE--EEEEEEEEEECCBTTHHHHHHHHHHHH
T ss_pred ceEEEEEECCccccccccccCCCCHHHHHHHHHHHHHHHhCCCCC-Cc-EE--EEEEcCCccCCCCCCHHHHHHHHHHHH
Confidence 11 233432211 0101112344556778888887753211 11 11 0112 34666678888876655422
Q ss_pred ---CCcEEEEec-CCCCChhhhHHHHHHHHHHHhCC
Q 011027 448 ---LSKVFLATG-HEGLGLSLALGTAELVADMVLTN 479 (495)
Q Consensus 448 ---~~~l~~~~G-~g~~G~~~ap~~a~~la~~i~g~ 479 (495)
.++||++.. +.|.|+.-+...|+.+|+.|+++
T Consensus 438 ~~~~~~l~l~G~~~~G~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 438 TAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp HHTTCSEEECSTTTSCCSHHHHHHHHHHHHHHHHHC
T ss_pred HhcCCCEEEEccCCCCCcHHHHHHHHHHHHHHHHhc
Confidence 368988876 78899999999999999999865
No 34
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.38 E-value=5.3e-12 Score=131.52 Aligned_cols=70 Identities=11% Similarity=-0.010 Sum_probs=51.2
Q ss_pred ceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCc--EEEEEcCCC---eeeecCeEEEccCcchHHHHHH
Q 011027 232 SQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGE--VEAVQTSKN---TLYSKKAIVVAAGCWSGSLMHD 306 (495)
Q Consensus 232 g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~--~~~v~~~~g---~~~~a~~VV~A~G~~s~~l~~~ 306 (495)
..++...+.+.|.+.+++.| ++++++++|+++..++ +++ .+.+++.++ ..+.+|.||.|+|.++ .+-+.
T Consensus 115 ~~i~~~~l~~~L~~~a~~~g----v~i~~~~~v~~i~~~~-~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S-~vR~~ 188 (535)
T 3ihg_A 115 AMLSQDKLEPILLAQARKHG----GAIRFGTRLLSFRQHD-DDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS-LVRES 188 (535)
T ss_dssp BCCCHHHHHHHHHHHHHHTT----CEEESSCEEEEEEEEC-GGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC-HHHHH
T ss_pred cccCHHHHHHHHHHHHHhCC----CEEEeCCEEEEEEECC-CCccccEEEEEEcCCCeEEEEeCEEEECCCCcc-hHHHH
Confidence 35667788999999888875 6999999999998862 211 345655544 5667899999999998 45444
Q ss_pred h
Q 011027 307 L 307 (495)
Q Consensus 307 l 307 (495)
+
T Consensus 189 l 189 (535)
T 3ihg_A 189 L 189 (535)
T ss_dssp T
T ss_pred c
Confidence 3
No 35
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.38 E-value=6.4e-12 Score=126.88 Aligned_cols=66 Identities=11% Similarity=-0.037 Sum_probs=50.9
Q ss_pred eEEEeCCCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 224 ~~~~~~~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
++.++|.+| +..+++.|.+.+++.| ++++++++|++|..+ +++ + |.+ +|..+.+|.||+|+|.+..
T Consensus 179 ~g~~~~~gG---~~~l~~~l~~~~~~~G----~~i~~~~~V~~i~~~--~~~-v-V~~-~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 179 GGPGLIRGG---CKAVIDELERIIMENK----GKILTRKEVVEINIE--EKK-V-YTR-DNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp CSCEEETTC---HHHHHHHHHHHHHTTT----CEEESSCCEEEEETT--TTE-E-EET-TCCEEECSEEEECSCHHHH
T ss_pred CCcceecCC---HHHHHHHHHHHHHHCC----CEEEcCCeEEEEEEE--CCE-E-EEe-CCcEEEeCEEEECCCHHHH
Confidence 456777777 4788999999888876 699999999999864 444 4 654 4555668999999998754
No 36
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.37 E-value=2.4e-11 Score=124.31 Aligned_cols=216 Identities=13% Similarity=0.105 Sum_probs=110.5
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH-HHHHHhhhcccccc
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG-SLMHDLLRETEIVL 315 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~-~l~~~l~~~~~~~~ 315 (495)
..+++.|.+.+.+ +.++++++|++|..+ +++ |.|++.+|+.+.+|.||+|+..+.. .++.... ....-.
T Consensus 235 ~~l~~~l~~~l~~------~~i~~~~~V~~i~~~--~~~-~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~~-~~~~~~ 304 (470)
T 3i6d_A 235 QTLVEEIEKQLKL------TKVYKGTKVTKLSHS--GSC-YSLELDNGVTLDADSVIVTAPHKAAAGMLSELP-AISHLK 304 (470)
T ss_dssp HHHHHHHHHTCCS------EEEECSCCEEEEEEC--SSS-EEEEESSSCEEEESEEEECSCHHHHHHHTTTST-THHHHH
T ss_pred HHHHHHHHHhcCC------CEEEeCCceEEEEEc--CCe-EEEEECCCCEEECCEEEECCCHHHHHHHcCCch-hhHHHh
Confidence 4677777665432 388999999999875 333 6788989976778999999998763 3332100 000001
Q ss_pred ccceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeee----eeeeeccccEEe----cccccc
Q 011027 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISM----TATTDVIGNLVL----GSSRQF 387 (495)
Q Consensus 316 ~~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~i----G~t~~~ 387 (495)
.++..++....+.++.+. ........+|+....- ......+.. .+...+++..++ |+...
T Consensus 305 ~~~~~~~~~v~l~~~~~~---~~~~~~~~g~l~~~~~--------~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~- 372 (470)
T 3i6d_A 305 NMHSTSVANVALGFPEGS---VQMEHEGTGFVISRNS--------DFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGD- 372 (470)
T ss_dssp TCEEEEEEEEEEEESSTT---CCCSSCSSEEEECSTT--------CCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSC-
T ss_pred cCCCCceEEEEEEECchh---cCCCCCCeEEEccCCC--------CCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCC-
Confidence 234444443334443321 1111112233211100 000000000 000012233332 32211
Q ss_pred cCCCccccHHHHHHHHHHHHhhcCCcccccccccccCceeeeeec-cCCCCCCcEEeec-----CCCCcEEEEec-CCCC
Q 011027 388 AGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLR-PYMPDGKPVIGPV-----PGLSKVFLATG-HEGL 460 (495)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r-~~t~D~~Piig~~-----~~~~~l~~~~G-~g~~ 460 (495)
.......+++..+..++.+.++|+..... . .. ..+.|..-. .+++++.+.+..+ ...+|||++.. +.|.
T Consensus 373 ~~~~~~~~~~~~~~~~~~l~~~~g~~~~p-~-~~--~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~ 448 (470)
T 3i6d_A 373 ESIVDLSDNDIINIVLEDLKKVMNINGEP-E-MT--CVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEGV 448 (470)
T ss_dssp CGGGTSCHHHHHHHHHHHHGGGSCCCSCC-S-EE--EEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSCC
T ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCCCc-e-EE--EEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCCC
Confidence 01111234555688889999998864221 1 11 123455433 3555554322211 11478999988 7888
Q ss_pred ChhhhHHHHHHHHHHHhC
Q 011027 461 GLSLALGTAELVADMVLT 478 (495)
Q Consensus 461 G~~~ap~~a~~la~~i~g 478 (495)
|+.-|...|+.+|+.|+.
T Consensus 449 gv~~a~~sG~~aA~~i~~ 466 (470)
T 3i6d_A 449 GIPDCIDQGKAAVSDALT 466 (470)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999998864
No 37
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.37 E-value=3.3e-11 Score=126.41 Aligned_cols=64 Identities=14% Similarity=0.213 Sum_probs=50.4
Q ss_pred eecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcC------CC---------eeeecCeEEEccC
Q 011027 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTS------KN---------TLYSKKAIVVAAG 297 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~------~g---------~~~~a~~VV~A~G 297 (495)
.++...+.+.|.+.+++.| ++++++++|+++..++ ++.+++|.+. +| ..+.+|.||+|+|
T Consensus 140 ~v~r~~l~~~L~~~a~~~G----v~i~~g~~v~~l~~~~-~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG 214 (584)
T 2gmh_A 140 VVRLGHLVSWMGEQAEALG----VEVYPGYAAAEILFHE-DGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEG 214 (584)
T ss_dssp ECCHHHHHHHHHHHHHHTT----CEEETTCCEEEEEECT-TSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCC
T ss_pred EEeHHHHHHHHHHHHHHcC----CEEEcCCEEEEEEEcC-CCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeC
Confidence 4566788999999888775 7999999999998753 4567777765 33 4567899999999
Q ss_pred cchH
Q 011027 298 CWSG 301 (495)
Q Consensus 298 ~~s~ 301 (495)
.++.
T Consensus 215 ~~S~ 218 (584)
T 2gmh_A 215 CHGH 218 (584)
T ss_dssp TTCH
T ss_pred CCch
Confidence 9875
No 38
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.37 E-value=8.7e-12 Score=124.92 Aligned_cols=64 Identities=9% Similarity=0.040 Sum_probs=51.6
Q ss_pred ceecHHHHHHHHHHHhhhh-ccCCceeEEecCceeEEEEecCCCcEE-EEEcCCCeeeecCeEEEccCcchH
Q 011027 232 SQLDAMLAVAYIEKGNRHF-ASKGRYAEFYHDPVTCLLRSNSTGEVE-AVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 232 g~~~p~~~~~~l~~~~~~~-g~~~~~~~~~~~~V~~l~~~~~~~~~~-~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
..++...+.+.|.+.+++. | ++++++++|+++..+ ++++. .|++.+|+.+.+|.||.|+|.++.
T Consensus 102 ~~~~r~~l~~~L~~~~~~~~g----v~i~~~~~v~~i~~~--~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 102 ILMPCESLRRLVLEKIDGEAT----VEMLFETRIEAVQRD--ERHAIDQVRLNDGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp EECCHHHHHHHHHHHHTTCTT----EEEECSCCEEEEEEC--TTSCEEEEEETTSCEEEEEEEEECCCTTCH
T ss_pred ccccHHHHHHHHHHHhhhcCC----cEEEcCCEEEEEEEc--CCceEEEEEECCCCEEECCEEEECCCCChH
Confidence 4577888999999988875 4 789999999999875 34432 678888876778999999999887
No 39
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.36 E-value=6.6e-12 Score=128.85 Aligned_cols=218 Identities=10% Similarity=0.083 Sum_probs=113.8
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch-HHHHHHhhhcccccc
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS-GSLMHDLLRETEIVL 315 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s-~~l~~~l~~~~~~~~ 315 (495)
..+++.|.+.+.+ +.++++++|++|..+ ++ .|.|++.+| .+.+|+||+|++++. ..|+..... ..-.
T Consensus 236 ~~l~~~l~~~l~~------~~i~~~~~V~~i~~~--~~-~~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~~~--~~~~ 303 (475)
T 3lov_A 236 ESLIERLEEVLER------SEIRLETPLLAISRE--DG-RYRLKTDHG-PEYADYVLLTIPHPQVVQLLPDAHL--PELE 303 (475)
T ss_dssp HHHHHHHHHHCSS------CEEESSCCCCEEEEE--TT-EEEEECTTC-CEEESEEEECSCHHHHHHHCTTSCC--HHHH
T ss_pred HHHHHHHHhhccC------CEEEcCCeeeEEEEe--CC-EEEEEECCC-eEECCEEEECCCHHHHHHHcCccCH--HHHh
Confidence 3566666665432 388999999999876 33 477999888 556799999999876 344432100 0001
Q ss_pred ccceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeee----eeeeccccE---Eeccccccc
Q 011027 316 DIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMT----ATTDVIGNL---VLGSSRQFA 388 (495)
Q Consensus 316 ~~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~---~iG~t~~~~ 388 (495)
.++..++...++.++.+. ..+....||+....- ......+... +...++..+ .+|+....
T Consensus 304 ~~~~~~~~~v~l~~~~~~----~~~~~g~g~l~~~~~--------~~~~~~~~~~s~~~~~~~p~~~~l~~~~~~~~~~- 370 (475)
T 3lov_A 304 QLTTHSTATVTMIFDQQQ----SLPIEGTGFVVNRRA--------PYSITACTAIDQKWNHSAPDHTVLRAFVGRPGND- 370 (475)
T ss_dssp TCCEEEEEEEEEEEECCS----SCSSSSSEEEECTTS--------SCSEEEEEEHHHHCTTTCTTEEEEEEEECBTTBC-
T ss_pred cCCCCeEEEEEEEECCcC----CCCCCCEEEEecCCC--------CCceEEEEEEcccCCCCCCCcEEEEEEeCCCCCC-
Confidence 245566666666665432 111222334321100 0000000000 000011111 22322111
Q ss_pred CCCccccHHHHHHHHHHHHhhcCCcccccccccccCceeeeeecc-CCCCCCcEEeec-----CCCCcEEEEe-cCCCCC
Q 011027 389 GFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP-YMPDGKPVIGPV-----PGLSKVFLAT-GHEGLG 461 (495)
Q Consensus 389 ~~~~~~~~~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~-~t~D~~Piig~~-----~~~~~l~~~~-G~g~~G 461 (495)
......+++..+..++.+.++|+... ... .. ..+.|..-.+ +++++...+..+ ...+|||++. .+.+.|
T Consensus 371 ~~~~~~~e~~~~~~~~~L~~~~g~~~-~p~-~~--~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~g 446 (475)
T 3lov_A 371 HLVHESDEVLQQAVLQDLEKICGRTL-EPK-QV--IISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDGVG 446 (475)
T ss_dssp GGGGSCHHHHHHHHHHHHHHHHSSCC-CCS-EE--EEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSCSS
T ss_pred cccCCCHHHHHHHHHHHHHHHhCCCC-CCe-EE--EEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCCCC
Confidence 11112344556788889999887532 111 11 1233544333 566653322211 1147899988 678889
Q ss_pred hhhhHHHHHHHHHHHhCCCCCC
Q 011027 462 LSLALGTAELVADMVLTNPLKV 483 (495)
Q Consensus 462 ~~~ap~~a~~la~~i~g~~~~~ 483 (495)
+.-|...|+.+|+.|+......
T Consensus 447 ~~~a~~sG~~aA~~i~~~l~~~ 468 (475)
T 3lov_A 447 LPDCVASAKTMIESIELEQSHT 468 (475)
T ss_dssp HHHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999998754433
No 40
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.35 E-value=1.6e-11 Score=128.97 Aligned_cols=186 Identities=18% Similarity=0.183 Sum_probs=107.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcccCCcceeeeccCC--CCchHHHHHHHHHHHHHHHHHHHH
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRT--PGSEIWDLALRSNKLWKMLADSLR 158 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS~~~~g~i~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~ 158 (495)
.+||||||||++|+++|++|+ +.|.+|+||||..+..+.|..++|.++..... +++. .. ++.+....
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa-~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~--~~------~~~dtl~~-- 86 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLS-EAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNW--RW------HFYDTVKG-- 86 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCH--HH------HHHHHHHH--
T ss_pred cCCEEEECccHHHHHHHHHHH-HCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCH--HH------HHHHHHHh--
Confidence 689999999999999999998 48999999999877666766666656543221 2221 11 11111110
Q ss_pred hcCCCCccccceEeeeeEEEecCHHH----HHHHHHHHHHHHHcCCceEEcChhhHH-HhCCCCccC----CcceEEEeC
Q 011027 159 DQGLDPLQVIGWKQTGSLLIGRTPEE----LVMLKERVKQLCEAGLRAEYLSSSDLL-QAEPELMVG----EDSRAAFLP 229 (495)
Q Consensus 159 ~~~~~~~~~~~~~~~g~l~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~p~l~~~----~~~~~~~~~ 229 (495)
.. +. .++.. .+...+.++.+.+.|+++......++. ..++..... ......++.
T Consensus 87 -g~--------~l--------~d~~~v~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~ 149 (621)
T 2h88_A 87 -SD--------WL--------GDQDAIHYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCV 149 (621)
T ss_dssp -TT--------TC--------SCHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECS
T ss_pred -cC--------CC--------CCHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEe
Confidence 00 00 01111 111223445566678775433211111 111111000 000011111
Q ss_pred CCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEc---CCCe--eeecCeEEEccCcchHH
Q 011027 230 YDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT---SKNT--LYSKKAIVVAAGCWSGS 302 (495)
Q Consensus 230 ~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~---~~g~--~~~a~~VV~A~G~~s~~ 302 (495)
. ...+..++..|.+.+.+.| ++++++++|++|..+ ++++.+|.. .+|+ .+.++.||+|||.++..
T Consensus 150 ~--d~tG~~l~~~L~~~~~~~g----v~i~~~~~v~~Li~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 150 A--DRTGHSLLHTLYGRSLRYD----TSYFVEYFALDLLME--NGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp T--TCHHHHHHHHHHHHHTTSC----CEEEETEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred c--CCCHHHHHHHHHHHHHhCC----CEEEEceEEEEEEEE--CCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 1 1235678899998887754 799999999999876 567777664 4564 45679999999998863
No 41
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.34 E-value=4e-11 Score=124.92 Aligned_cols=69 Identities=12% Similarity=0.114 Sum_probs=56.2
Q ss_pred eCCCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHH
Q 011027 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGS 302 (495)
Q Consensus 228 ~~~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~ 302 (495)
.+.+..+++..+.+.|.+.+++.| +.++.+ +|+++..++ ++.++.|.+.+|+.+.+|.||.|+|.++..
T Consensus 156 ~~~~~~i~~~~l~~~L~~~a~~~g----v~~~~~-~v~~i~~~~-~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 156 MSHAWHFDAHLVADFLKRWAVERG----VNRVVD-EVVDVRLNN-RGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHTT----CEEEEC-CEEEEEECT-TSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred CCccEEEeHHHHHHHHHHHHHHCC----CEEEEe-eEeEEEEcC-CCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 556678999999999999988765 688888 899998752 455678888888767789999999998764
No 42
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.34 E-value=2.9e-11 Score=126.63 Aligned_cols=184 Identities=18% Similarity=0.177 Sum_probs=111.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHHhc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (495)
.+||+|||||++|+++|+.|+ ++|.+|+|||+.....|.|..++|.++......... ..+......++.++...
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~-~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~-~g~~ds~~~~~~~~~~~---- 199 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSAR-DAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAK-LGIEDKKQIMIDDTMKG---- 199 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHH-SSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGG-GTCCCCTHHHHHHHHHH----
T ss_pred CCCEEEECCCHHHHHHHHHHH-HCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHH-hCCCCCHHHHHHHHHHh----
Confidence 679999999999999999998 599999999998777777777777775433211000 00000001112222111
Q ss_pred CCCCccccceEeeeeEEEecCHHHH----HHHHHHHHHHHHcCCceEEcChhhHHHhCCCCccCCcceEEEeCCCceecH
Q 011027 161 GLDPLQVIGWKQTGSLLIGRTPEEL----VMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDA 236 (495)
Q Consensus 161 ~~~~~~~~~~~~~g~l~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~~~p 236 (495)
+. +. .++... +.....++++.+.|+++..+. ... .......+.+.++...+
T Consensus 200 g~-------~~--------~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~------~~g----g~~~~r~~~~~~~~~~g 254 (572)
T 1d4d_A 200 GR-------NI--------NDPELVKVLANNSSDSIDWLTSMGADMTDVG------RMG----GASVNRSHRPTGGAGVG 254 (572)
T ss_dssp TT-------TC--------SCHHHHHHHHHTHHHHHHHHHHHTCCCCEEE------CCT----TCSSCCEEESTTTCCHH
T ss_pred cC-------CC--------CCHHHHHHHHHccHHHHHHHHhcCCcccccc------ccC----CCcCCeeEecCCCCCCH
Confidence 10 00 001101 111223344555566543211 000 11122244566666677
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCC-CcEEEEEcC--CCe--eeecCeEEEccCcchH
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNST-GEVEAVQTS--KNT--LYSKKAIVVAAGCWSG 301 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~-~~~~~v~~~--~g~--~~~a~~VV~A~G~~s~ 301 (495)
..+++.|.+.+++.| ++++++++|++|..+ + +++++|... +|+ .+.+|.||+|+|.++.
T Consensus 255 ~~l~~~L~~~~~~~g----v~i~~~t~v~~l~~~--~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRG----TDIRLNSRVVRILED--ASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHHHHHHHHTT----CEEESSEEEEEEEEC----CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHcC----CeEEecCEEEEEEEC--CCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 889999999888875 799999999999875 4 677777654 564 4567999999999874
No 43
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.34 E-value=4e-12 Score=131.37 Aligned_cols=68 Identities=13% Similarity=0.117 Sum_probs=56.1
Q ss_pred eEEEeCCCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch
Q 011027 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 224 ~~~~~~~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s 300 (495)
.|.++|.+|. ..+++.|.+.+++.| ++++++++|++|..+ ++++.+|++.+|+.+.||.||.++..+.
T Consensus 211 ~G~~~p~GG~---~~l~~aL~~~~~~~G----g~I~~~~~V~~I~~~--~~~~~gV~~~~g~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 211 WGVWFPRGGT---GALVQGMIKLFQDLG----GEVVLNARVSHMETT--GNKIEAVHLEDGRRFLTQAVASNADVVH 278 (501)
T ss_dssp CCEEEETTHH---HHHHHHHHHHHHHTT----CEEECSCCEEEEEEE--TTEEEEEEETTSCEEECSCEEECCC---
T ss_pred CCeEEeCCCC---cchHHHHHHHHHHhC----CceeeecceeEEEee--CCeEEEEEecCCcEEEcCEEEECCCHHH
Confidence 4677787774 578999999988887 599999999999987 7888899999998888999999888764
No 44
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.34 E-value=3e-11 Score=126.18 Aligned_cols=69 Identities=13% Similarity=-0.031 Sum_probs=52.0
Q ss_pred CceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEc--CCC-eeeecCeEEEccCcchHHHHHHh
Q 011027 231 DSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT--SKN-TLYSKKAIVVAAGCWSGSLMHDL 307 (495)
Q Consensus 231 ~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~--~~g-~~~~a~~VV~A~G~~s~~l~~~l 307 (495)
...++...+.+.|.+.+++.| ++++++++|+++..+ ++. +.|++ .+| +.+.+|.||.|.|.++ .+-+.+
T Consensus 142 ~~~i~~~~l~~~L~~~a~~~g----v~i~~~~~v~~l~~~--~~~-v~v~~~~~~G~~~~~a~~vV~ADG~~S-~vR~~l 213 (570)
T 3fmw_A 142 TGLVPQSRTEALLAEHAREAG----AEIPRGHEVTRLRQD--AEA-VEVTVAGPSGPYPVRARYGVGCDGGRS-TVRRLA 213 (570)
T ss_dssp BBCCCHHHHHHHHHHHHHHHT----EECCBSCEEEECCBC--SSC-EEEEEEETTEEEEEEESEEEECSCSSC-HHHHHT
T ss_pred eEEeCHHHHHHHHHHHHHhCC----CEEEeCCEEEEEEEc--CCe-EEEEEEeCCCcEEEEeCEEEEcCCCCc-hHHHHc
Confidence 345777889999999888765 688999999999875 333 44555 677 5677899999999998 444443
No 45
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.33 E-value=6.1e-12 Score=126.26 Aligned_cols=59 Identities=17% Similarity=0.057 Sum_probs=48.3
Q ss_pred ecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch
Q 011027 234 LDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 234 ~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s 300 (495)
..+..+++.|.+.+++.| ++++++++|+++..+ ++ .+.|.+.+| .+.+|.||+|+|.++
T Consensus 129 ~~~~~l~~~L~~~l~~~G----v~i~~~~~V~~i~~~--~~-~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 129 HSAKDIIRMLMAEMKEAG----VQLRLETSIGEVERT--AS-GFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp SCHHHHHHHHHHHHHHHT----CEEECSCCEEEEEEE--TT-EEEEEETTE-EEEESEEEECCCCSS
T ss_pred CCHHHHHHHHHHHHHHCC----CEEEECCEEEEEEEe--CC-EEEEEECCc-EEEeeEEEECCCCcc
Confidence 345678889998888876 799999999999876 33 478888888 455799999999987
No 46
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.32 E-value=2.9e-11 Score=124.79 Aligned_cols=71 Identities=13% Similarity=0.133 Sum_probs=57.9
Q ss_pred CCCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHH
Q 011027 229 PYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMH 305 (495)
Q Consensus 229 ~~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~ 305 (495)
|..|......+++.|.+.+++.| ++++++++|+++..+ +++++.|.+.+|+.+.+|.||+|+|+++.....
T Consensus 212 p~~G~~~~~~l~~~L~~~l~~~G----v~I~~~t~V~~I~~~--~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~ 282 (549)
T 3nlc_A 212 PHIGTFKLVTMIEKMRATIIELG----GEIRFSTRVDDLHME--DGQITGVTLSNGEEIKSRHVVLAVGHSARDTFE 282 (549)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTT----CEEESSCCEEEEEES--SSBEEEEEETTSCEEECSCEEECCCTTCHHHHH
T ss_pred cccccchHHHHHHHHHHHHHhcC----CEEEeCCEEEEEEEe--CCEEEEEEECCCCEEECCEEEECCCCChhhHHH
Confidence 44456667788999998888776 699999999999875 567888999998877789999999999974433
No 47
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.32 E-value=4e-11 Score=125.71 Aligned_cols=187 Identities=18% Similarity=0.154 Sum_probs=105.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcccCCcceeeeccCC--CCchHHHHHHHHHHHHHHHHHHHH
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRT--PGSEIWDLALRSNKLWKMLADSLR 158 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS~~~~g~i~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~ 158 (495)
.+||+|||||++|+++|++|+ +.|.+|+||||.....|.|..++|.+...... .++.. . ++.+.... .
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la-~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~--~------~~~d~~~~-g 76 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQIS-QSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWE--W------HMYDTVKG-S 76 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHH--H------HHHHHHHH-T
T ss_pred cCCEEEECcCHHHHHHHHHHH-HCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHH--H------HHHHHHHh-c
Confidence 589999999999999999998 48999999999876656665554444322222 22211 1 11111110 0
Q ss_pred hcCCCCccccceEeeeeEEEecCHHHH----HHHHHHHHHHHHcCCceEEcChhhHH-HhCCCCccC---CcceEEEeCC
Q 011027 159 DQGLDPLQVIGWKQTGSLLIGRTPEEL----VMLKERVKQLCEAGLRAEYLSSSDLL-QAEPELMVG---EDSRAAFLPY 230 (495)
Q Consensus 159 ~~~~~~~~~~~~~~~g~l~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~p~l~~~---~~~~~~~~~~ 230 (495)
.+. .+.... +...+.++.+.+.|+++.......+. ..++..... ......++..
T Consensus 77 -~~~-----------------~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~ 138 (588)
T 2wdq_A 77 -DYI-----------------GDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAA 138 (588)
T ss_dssp -TTC-----------------SCHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECST
T ss_pred -CCC-----------------CCHHHHHHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcC
Confidence 000 001111 11123345556677765433211110 001100000 0011122221
Q ss_pred CceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEc---CCCe--eeecCeEEEccCcchHH
Q 011027 231 DSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT---SKNT--LYSKKAIVVAAGCWSGS 302 (495)
Q Consensus 231 ~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~---~~g~--~~~a~~VV~A~G~~s~~ 302 (495)
+ ..+..+++.|.+.+++.| ++++++++|++|..++ ++++++|.. .+|+ .+.++.||+|+|.++..
T Consensus 139 d--~~g~~l~~~L~~~~~~~g----v~i~~~~~v~~L~~~~-~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 139 D--RTGHALLHTLYQQNLKNH----TTIFSEWYALDLVKNQ-DGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp T--CHHHHHHHHHHHHHHHTT----CEEEETEEEEEEEECT-TSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred C--CCHHHHHHHHHHHHHhCC----CEEEeCcEEEEEEECC-CCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 1 235678899998888765 7999999999998742 456777663 4564 45679999999998764
No 48
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.28 E-value=1.5e-11 Score=127.78 Aligned_cols=182 Identities=21% Similarity=0.143 Sum_probs=88.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHHhc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQ 160 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (495)
.+||+|||||++|+++|++|+ + |.+|+||||.....|+|..++|.++......+ ..+ .++.+....- .
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la-~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~d--s~~------~~~~d~l~~g--~ 75 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLA-D-QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETD--SID------SHVEDTLIAG--A 75 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T-TSCEEEECSSCTTC-------------CCSHH--HHH------HHHHHHHHHT--T
T ss_pred CCCEEEECccHHHHHHHHHHh-c-CCcEEEEECCCCCCCChhhcCCCEEEecCCCC--CHH------HHHHHHHHhh--c
Confidence 689999999999999999997 6 99999999998777788877777754332111 000 1111111110 0
Q ss_pred CCCCccccceEeeeeEEEecCHHHH----HHHHHHHHHHHHcCCceEEcC----hhhH-HHhCCCCccCCcceEEEeCCC
Q 011027 161 GLDPLQVIGWKQTGSLLIGRTPEEL----VMLKERVKQLCEAGLRAEYLS----SSDL-LQAEPELMVGEDSRAAFLPYD 231 (495)
Q Consensus 161 ~~~~~~~~~~~~~g~l~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~----~~~~-~~~~p~l~~~~~~~~~~~~~~ 231 (495)
+. .++... +...+.++.+.+.|+++.... ..+. ...++.. ....++..
T Consensus 76 g~-----------------~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~----~~~r~~~~-- 132 (540)
T 1chu_A 76 GI-----------------CDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGH----SHRRILHA-- 132 (540)
T ss_dssp TC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCC-----------------------------------
T ss_pred cc-----------------CCHHHHHHHHHhHHHHHHHHHHcCCCcccCcccCcCCcccccccccc----ccCeEEEe--
Confidence 00 011111 112234455666777654332 1111 0001000 00011111
Q ss_pred ceecHHHHHHHHHHHhhh-hccCCceeEEecCceeEEEEecCCC------cEEEEEcC---CCe--eeecCeEEEccCcc
Q 011027 232 SQLDAMLAVAYIEKGNRH-FASKGRYAEFYHDPVTCLLRSNSTG------EVEAVQTS---KNT--LYSKKAIVVAAGCW 299 (495)
Q Consensus 232 g~~~p~~~~~~l~~~~~~-~g~~~~~~~~~~~~V~~l~~~~~~~------~~~~v~~~---~g~--~~~a~~VV~A~G~~ 299 (495)
+...+..+++.|.+.+++ .| ++++++++|++|..++ ++ ++++|.+. +|+ .+.++.||+|+|.+
T Consensus 133 ~d~~g~~l~~~L~~~~~~~~g----v~i~~~~~v~~L~~~~-~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 207 (540)
T 1chu_A 133 ADATGREVETTLVSKALNHPN----IRVLERTNAVDLIVSD-KIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGA 207 (540)
T ss_dssp ---------CCCHHHHHHCTT----EEEECSEEEEEEEEGG-GTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHcCCC----CEEEeCcEEEEEEEcC-CCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCc
Confidence 112345677777777776 33 7999999999998732 34 67776653 564 56679999999998
Q ss_pred hHH
Q 011027 300 SGS 302 (495)
Q Consensus 300 s~~ 302 (495)
+..
T Consensus 208 ~~~ 210 (540)
T 1chu_A 208 SKV 210 (540)
T ss_dssp GGG
T ss_pred ccc
Confidence 753
No 49
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.27 E-value=1.5e-10 Score=121.62 Aligned_cols=183 Identities=18% Similarity=0.166 Sum_probs=102.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCC--ccEEEEcCCcCCCCcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHH
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSD--LSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLR 158 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G--~~V~liE~~~~~~gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (495)
.+||+|||||++|+++|+.|++ .| .+|+||||.....+.|...+|.+.......+.. +. ++.+...
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~-~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~--~~------~~~d~~~--- 72 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQ-ANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSF--EY------HFHDTVA--- 72 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-HCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCH--HH------HHHHHHH---
T ss_pred cCCEEEECCCHHHHHHHHHHHh-cCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCH--HH------HHHHHHH---
Confidence 5899999999999999999984 88 999999998655555544444443322222221 11 0111111
Q ss_pred hcCCCCccccceEeeeeEEEecCHHHH----HHHHHHHHHHHHcCCceEEcChhhHH-HhCCCCccCCcceEEEeCCCce
Q 011027 159 DQGLDPLQVIGWKQTGSLLIGRTPEEL----VMLKERVKQLCEAGLRAEYLSSSDLL-QAEPELMVGEDSRAAFLPYDSQ 233 (495)
Q Consensus 159 ~~~~~~~~~~~~~~~g~l~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~p~l~~~~~~~~~~~~~~g~ 233 (495)
... +. .+.... +...+.++.+...|+++.......+. ..++. ......++..+
T Consensus 73 ~g~--------~~--------~d~~~v~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg----~~~~r~~~~~d-- 130 (602)
T 1kf6_A 73 GGD--------WL--------CEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGG----MKIERTWFAAD-- 130 (602)
T ss_dssp HTT--------TC--------SCHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTT----CSSCCEECSTT--
T ss_pred hcC--------CC--------CCHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCC----ccCCeEEEcCC--
Confidence 000 00 000100 11123344555667665432111110 00100 00111112111
Q ss_pred ecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEE---cCCCe--eeecCeEEEccCcchHH
Q 011027 234 LDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQ---TSKNT--LYSKKAIVVAAGCWSGS 302 (495)
Q Consensus 234 ~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~---~~~g~--~~~a~~VV~A~G~~s~~ 302 (495)
..+..++..|.+.+.+.+ |++++++++|++|..+ ++++++|. +.+|+ .+.++.||+|+|.++..
T Consensus 131 ~tg~~l~~~L~~~~~~~g---nv~i~~~~~v~~l~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 131 KTGFHMLHTLFQTSLQFP---QIQRFDEHFVLDILVD--DGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp CHHHHHHHHHHHHHTTCT---TEEEEETEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGG
T ss_pred CCHHHHHHHHHHHHHhCC---CcEEEeCCEEEEEEEe--CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccc
Confidence 124678888888887654 4799999999999876 56666654 35675 56789999999998764
No 50
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.27 E-value=4.4e-11 Score=123.78 Aligned_cols=64 Identities=13% Similarity=0.053 Sum_probs=50.0
Q ss_pred ceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEE--cCCCe--eeecCeEEEccCcchH
Q 011027 232 SQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQ--TSKNT--LYSKKAIVVAAGCWSG 301 (495)
Q Consensus 232 g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~--~~~g~--~~~a~~VV~A~G~~s~ 301 (495)
..++...+.+.|.+.+++.| ++++++++|+++..+ ++++.+|. +.+|+ .+.+|.||.|+|.++.
T Consensus 106 ~~v~r~~l~~~L~~~a~~~G----v~i~~~~~V~~v~~~--~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 106 YQVERARFDDMLLRNSERKG----VDVRERHEVIDVLFE--GERAVGVRYRNTEGVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp EBCCHHHHHHHHHHHHHHTT----CEEESSCEEEEEEEE--TTEEEEEEEECSSSCEEEEEEEEEEECCCTTCS
T ss_pred eEecHHHHHHHHHHHHHhCC----CEEEcCCEEEEEEEE--CCEEEEEEEEeCCCCEEEEEcCEEEECCCcchH
Confidence 35777889999999888765 689999999999886 56554444 45673 5677999999999874
No 51
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.25 E-value=2e-10 Score=117.29 Aligned_cols=171 Identities=19% Similarity=0.129 Sum_probs=101.9
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcccCCcceeeeccCCCCchHHHHHHHHHHHHHHHHHHHHhcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGATGAGQGYIWMVHRTPGSEIWDLALRSNKLWKMLADSLRDQGL 162 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS~~~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 162 (495)
||+|||||++|+++|++|+ +.|.+|+||||. ...|+|..++|.+.......+... .. +.+.... . .+.
T Consensus 1 DVvVIG~G~AGl~aA~~la-~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~-~~-------~~d~l~~-g-~~~ 68 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALR-RAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPE-LH-------AQDTIRV-G-DGL 68 (472)
T ss_dssp CEEEECCSHHHHHHHHHHH-HTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHH-HH-------HHHHHHH-H-TTC
T ss_pred CEEEECCCHHHHHHHHHHH-HCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHH-HH-------HHHHHHh-c-CCc
Confidence 7999999999999999998 489999999998 667777777776655443323221 11 1111110 0 000
Q ss_pred CCccccceEeeeeEEEecCHHHH----HHHHHHHHHHHHcCCceEEcChhhHHHhCCCCccCCcceEEEeCCCceecHHH
Q 011027 163 DPLQVIGWKQTGSLLIGRTPEEL----VMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFLPYDSQLDAML 238 (495)
Q Consensus 163 ~~~~~~~~~~~g~l~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~g~~~p~~ 238 (495)
.++... +...+..+.+.+.|+++..- ...++... ... .++. +...+..
T Consensus 69 -----------------~d~~~v~~~~~~~~~~i~~l~~~Gv~~~~~-----~~~~~g~~---~~r-~~~~--~d~~g~~ 120 (472)
T 2e5v_A 69 -----------------CDVKTVNYVTSEAKNVIETFESWGFEFEED-----LRLEGGHT---KRR-VLHR--TDETGRE 120 (472)
T ss_dssp -----------------SCHHHHHHHHHHHHHHHHHHHHTTCCCCSS-----CBCCTTCS---SCC-EECS--SSCHHHH
T ss_pred -----------------CCHHHHHHHHHHHHHHHHHHHHcCCCCCcc-----cccccCcC---cCc-EEEe--CCCCHHH
Confidence 011111 11223345555667664320 01111110 111 1221 2345678
Q ss_pred HHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEc--CCCeeeecCeEEEccCcchH
Q 011027 239 AVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT--SKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 239 ~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~--~~g~~~~a~~VV~A~G~~s~ 301 (495)
+++.|.+.+++.| ++++++++| +|..+ ++++.++.. .+|++ .+|.||+|+|.++.
T Consensus 121 l~~~L~~~~~~~g----v~i~~~~~v-~l~~~--~~~v~Gv~v~~~~g~~-~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 121 IFNFLLKLAREEG----IPIIEDRLV-EIRVK--DGKVTGFVTEKRGLVE-DVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHHTT----CCEECCCEE-EEEEE--TTEEEEEEETTTEEEC-CCSEEEECCCCCGG
T ss_pred HHHHHHHHHHhCC----CEEEECcEE-EEEEe--CCEEEEEEEEeCCCeE-EeeeEEECCCCCcc
Confidence 8888888876554 789999999 99876 566766654 34554 47999999999875
No 52
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.25 E-value=1e-10 Score=121.96 Aligned_cols=67 Identities=16% Similarity=0.249 Sum_probs=54.6
Q ss_pred CceecHHHHHHHHHHHhhhh-ccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHH
Q 011027 231 DSQLDAMLAVAYIEKGNRHF-ASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSL 303 (495)
Q Consensus 231 ~g~~~p~~~~~~l~~~~~~~-g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l 303 (495)
+..+++..+.+.|.+.+++. | ++++++ +|+++..++ ++.++.|.+.+|+.+.+|.||.|+|.++..+
T Consensus 188 ~~~~~~~~l~~~L~~~~~~~~G----v~i~~~-~V~~i~~~~-~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~ 255 (550)
T 2e4g_A 188 AWHFDAHLVADFLRRFATEKLG----VRHVED-RVEHVQRDA-NGNIESVRTATGRVFDADLFVDCSGFRGLLI 255 (550)
T ss_dssp EEEECHHHHHHHHHHHHHHHSC----CEEEEC-CEEEEEECT-TSCEEEEEETTSCEEECSEEEECCGGGCCCC
T ss_pred ceEEcHHHHHHHHHHHHHhcCC----cEEEEC-eEeEEEEcC-CCCEEEEEECCCCEEECCEEEECCCCchhhH
Confidence 45688999999999998887 6 688888 999998742 4567788888887677899999999987643
No 53
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.24 E-value=6.7e-10 Score=114.28 Aligned_cols=62 Identities=11% Similarity=0.017 Sum_probs=47.3
Q ss_pred eecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCe---eeecCeEEEccCcchH
Q 011027 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT---LYSKKAIVVAAGCWSG 301 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~---~~~a~~VV~A~G~~s~ 301 (495)
.++...+.+.|.+.+.+.| ++++++++|+++..+ ++. +.|++.++. .+.+|.||.|.|.++.
T Consensus 103 ~i~~~~l~~~L~~~~~~~g----v~v~~~~~v~~i~~~--~~~-v~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 103 AVPQSTTESVLEEWALGRG----AELLRGHTVRALTDE--GDH-VVVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp EEEHHHHHHHHHHHHHHTT----CEEEESCEEEEEEEC--SSC-EEEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred ecCHHHHHHHHHHHHHhCC----CEEEcCCEEEEEEEe--CCE-EEEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 4566788888988888765 689999999999875 333 446665542 5667999999999875
No 54
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.23 E-value=1.5e-10 Score=110.17 Aligned_cols=40 Identities=30% Similarity=0.587 Sum_probs=33.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcC-CccEEEEcCCcCCCCcc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGS-DLSVAVVDKVVPCSGAT 121 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~-G~~V~liE~~~~~~gaS 121 (495)
.+||+|||||++|+++|+.|+ +. |.+|+|||+.....+.+
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la-~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEIS-KNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-TSTTSCEEEEESSSSCCTTT
T ss_pred ccCEEEECccHHHHHHHHHHH-HcCCCeEEEEECCCCCCCce
Confidence 579999999999999999998 46 99999999985444433
No 55
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.22 E-value=3.9e-11 Score=119.94 Aligned_cols=61 Identities=16% Similarity=0.176 Sum_probs=47.0
Q ss_pred cHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecC-CCcEEEEEcCCCeeeecCeEEEccCcch
Q 011027 235 DAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNS-TGEVEAVQTSKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 235 ~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~-~~~~~~v~~~~g~~~~a~~VV~A~G~~s 300 (495)
++..+++.|.+.+++.| ++++++++|+++..+++ .+..+.|++.++. +.+|.||+|+|.++
T Consensus 107 ~~~~l~~~L~~~~~~~G----v~i~~~~~v~~i~~~~~g~~~~~~v~~~~g~-i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYG----AKILLRSEVSQVERIQNDEKVRFVLQVNSTQ-WQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHHHHHT----CEEECSCCEEEEEECCSCSSCCEEEEETTEE-EEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCC----CEEEeCCEEEEEEcccCcCCCeEEEEECCCE-EECCEEEECCCCcc
Confidence 56788899998888876 79999999999986410 0223678887774 55799999999988
No 56
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.21 E-value=1.6e-09 Score=111.43 Aligned_cols=62 Identities=11% Similarity=0.006 Sum_probs=46.9
Q ss_pred eecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCe---eeecCeEEEccCcchH
Q 011027 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT---LYSKKAIVVAAGCWSG 301 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~---~~~a~~VV~A~G~~s~ 301 (495)
.++...+.+.|.+.+++.| ++++++++|+++..+ ++. +.|++.++. .+.+|.||.|.|.++.
T Consensus 102 ~i~~~~l~~~L~~~~~~~g----v~v~~~~~v~~i~~~--~~~-v~v~~~~~~g~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 102 TVPQSVTETHLEQWATGLG----ADIRRGHEVLSLTDD--GAG-VTVEVRGPEGKHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp EEEHHHHHHHHHHHHHHTT----CEEEETCEEEEEEEE--TTE-EEEEEEETTEEEEEEESEEEECCCTTCH
T ss_pred ecCHHHHHHHHHHHHHHCC----CEEECCcEEEEEEEc--CCe-EEEEEEcCCCCEEEEeCEEEECCCcchH
Confidence 4555678888888888765 689999999999876 333 446655542 5667999999999875
No 57
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.18 E-value=6.2e-10 Score=118.01 Aligned_cols=176 Identities=15% Similarity=0.142 Sum_probs=98.4
Q ss_pred CcccEEEECCCHHHHHHHHHHH---hcCCccEEEEcCCcCCCCcccCCcceeeec--cCC------CCchHHHHHHHHHH
Q 011027 80 HTFDVIIIGAGIIGLTIARQLL---VGSDLSVAVVDKVVPCSGATGAGQGYIWMV--HRT------PGSEIWDLALRSNK 148 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La---~~~G~~V~liE~~~~~~gaS~~~~g~i~~~--~~~------~~~~~~~l~~~~~~ 148 (495)
.++||||||||++|+++|++|+ ++.|.+|+||||..... ++..++|..... +.. .++.. .
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~-s~~~a~G~~~~~~~~~~~~~~g~~ds~~-~------- 91 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVER-SGAVAQGLSAINTYIDLTGRSERQNTLE-D------- 91 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTT-CSTTTTCEEEESCCCCSSSSBSCCCCHH-H-------
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCC-CcceecccccccchhhHHHhcCCCCCHH-H-------
Confidence 3689999999999999999997 33799999999986533 233445543322 110 12111 1
Q ss_pred HHHHHHHHHHhcCCCCccccceEeeeeEEEecCHHHHHHHHHHHHHHHHcCCceEEcChhhHHHhCCCCccCCcceEEEe
Q 011027 149 LWKMLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEELVMLKERVKQLCEAGLRAEYLSSSDLLQAEPELMVGEDSRAAFL 228 (495)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~p~l~~~~~~~~~~~ 228 (495)
+++...... .++ .....+ ..-.+...+.++.+.+.|+++..... . -+.
T Consensus 92 ~~~~~~~~g--~~l--------~d~~~v-----~~~~~~~~~~i~~l~~~Gv~f~~~~~-------g----------~~~ 139 (643)
T 1jnr_A 92 YVRYVTLDM--MGL--------AREDLV-----ADYARHVDGTVHLFEKWGLPIWKTPD-------G----------KYV 139 (643)
T ss_dssp HHHHHHHHT--TTC--------CCHHHH-----HHHHHHHHHHHHHHHHTTCCBCBCTT-------S----------CBC
T ss_pred HHHHHHHHh--cCc--------CcHHHH-----HHHHHHHHHHHHHHHHcCCcceeCCC-------C----------Ccc
Confidence 111111100 000 000000 00011122344556667776532110 0 001
Q ss_pred CCCc---eecHHHHHHHHHHHhhhh-ccCCce-eEEecCceeEEEEecCCC---cEEEEEc---CCCe--eeecCeEEEc
Q 011027 229 PYDS---QLDAMLAVAYIEKGNRHF-ASKGRY-AEFYHDPVTCLLRSNSTG---EVEAVQT---SKNT--LYSKKAIVVA 295 (495)
Q Consensus 229 ~~~g---~~~p~~~~~~l~~~~~~~-g~~~~~-~~~~~~~V~~l~~~~~~~---~~~~v~~---~~g~--~~~a~~VV~A 295 (495)
+.+. .+++..+.+.|.+.+++. | + +++++++|++|..+ ++ ++++|.. .+|+ .+.++.||+|
T Consensus 140 ~~~~~~~~~~g~~~~~~l~~~~~~~~g----v~~i~~~~~v~~L~~~--~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlA 213 (643)
T 1jnr_A 140 REGQWQIMIHGESYKPIIAEAAKMAVG----EENIYERVFIFELLKD--NNDPNAVAGAVGFSVREPKFYVFKAKAVILA 213 (643)
T ss_dssp BSSSSCEEEEETTHHHHHHHHHHHHHC----GGGEECSEEEEEEEEC--TTCTTBEEEEEEEESSSSCEEEEECSEEEEC
T ss_pred CCCccccCCCcHHHHHHHHHHHHhcCC----CcEEEecCEEEEEEEc--CCccceeEEEEEEEecCCcEEEEEcCEEEEC
Confidence 1111 233445677777777765 5 7 89999999999875 34 7877653 4554 4667999999
Q ss_pred cCcchHH
Q 011027 296 AGCWSGS 302 (495)
Q Consensus 296 ~G~~s~~ 302 (495)
||.++..
T Consensus 214 tGG~~~~ 220 (643)
T 1jnr_A 214 TGGATLL 220 (643)
T ss_dssp CCCBCSS
T ss_pred CCccccc
Confidence 9998763
No 58
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.13 E-value=1.4e-08 Score=98.88 Aligned_cols=36 Identities=36% Similarity=0.508 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPC 117 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~ 117 (495)
.+||+|||||++|+++|+.|+ +.|++|+||||....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~-~~G~~V~vlE~~~~~ 37 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALT-AAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHH-HCCCcEEEEECCCCC
Confidence 479999999999999999998 599999999998543
No 59
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.12 E-value=3.2e-10 Score=119.85 Aligned_cols=183 Identities=15% Similarity=0.137 Sum_probs=101.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcC------CccEEEEcCCcCCCCcccCCcc--eeeeccCCCCchHHHHHHHHHHHHH
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGS------DLSVAVVDKVVPCSGATGAGQG--YIWMVHRTPGSEIWDLALRSNKLWK 151 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~------G~~V~liE~~~~~~gaS~~~~g--~i~~~~~~~~~~~~~l~~~~~~~~~ 151 (495)
.++||||||||++|+++|++|++ . |.+|+||||..+..+.| .++| .+..... .++.. +.++
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~-~~~~~~pG~~V~vleK~~~~~s~s-~AqG~~gi~a~l~-~ds~e--------~~~~ 89 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVR-WADKYAPEAKILLVDKASLERSGA-VAQGLSAINTYLG-DNNAD--------DYVR 89 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-HHHHHCTTCCEEEECSSCTTTCST-TTTCEEEECCCCT-TSCHH--------HHHH
T ss_pred EEcCEEEECCCHHHHHHHHHHHh-hccccCCCCcEEEEEecCCCCCcc-cccCcchheeecC-CCCHH--------HHHH
Confidence 36899999999999999999985 5 99999999987655544 3456 3322221 11111 1111
Q ss_pred HHHHHHHhcCCCCccccceEeeeeEEEecCHHH----HHHHHHHHHHHHHcCCceEEcC-------hhhHHHhCCCCccC
Q 011027 152 MLADSLRDQGLDPLQVIGWKQTGSLLIGRTPEE----LVMLKERVKQLCEAGLRAEYLS-------SSDLLQAEPELMVG 220 (495)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~~~p~l~~~ 220 (495)
...... .++ .++.. .+...+.++.+.+.|+++...+ ..... .++.+..
T Consensus 90 ~~~~~~--~gl-----------------~d~~~v~~l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~-~fg~~~~- 148 (662)
T 3gyx_A 90 MVRTDL--MGL-----------------VREDLIYDLGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAK-AAGKSLR- 148 (662)
T ss_dssp HHHHHT--TTC-----------------CCHHHHHHHHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHH-HHTCCTT-
T ss_pred HHHHhc--CCC-----------------ccHHHHHHHHHHHHHHHHHHHHcCCCceecCCCCccccchhhh-ccccccc-
Confidence 111100 000 01111 1112233445556677654331 11111 1111110
Q ss_pred CcceEEEeCCC---ceecHHHHHHHHHHHhhhh--ccCCceeEEecCceeEEEEecCC--CcEEEEEc---CCCe--eee
Q 011027 221 EDSRAAFLPYD---SQLDAMLAVAYIEKGNRHF--ASKGRYAEFYHDPVTCLLRSNST--GEVEAVQT---SKNT--LYS 288 (495)
Q Consensus 221 ~~~~~~~~~~~---g~~~p~~~~~~l~~~~~~~--g~~~~~~~~~~~~V~~l~~~~~~--~~~~~v~~---~~g~--~~~ 288 (495)
.++-..+.+ ..+.+..+.+.|.+.+++. | +++++++.|++|..++ + +++.+|.. .+|+ .+.
T Consensus 149 --~gg~~~~r~~~~~~~~G~~i~~~L~~~a~~~~~g----V~i~~~~~v~dLi~~~-~~~g~v~Gv~~~~~~~g~~~~i~ 221 (662)
T 3gyx_A 149 --NGDKPVRSGRWQIMINGESYKVIVAEAAKNALGQ----DRIIERIFIVKLLLDK-NTPNRIAGAVGFNLRANEVHIFK 221 (662)
T ss_dssp --TTCCBCCSSTTCEEEEETSHHHHHHHHHHHHHCT----TTEECSEEECCCEECS-SSTTBEEEEEEEESSSSCEEEEE
T ss_pred --cCccccccceecccCCHHHHHHHHHHHHHhcCCC----cEEEEceEEEEEEEeC-CccceEEEEEEEEcCCCcEEEEE
Confidence 011111111 2234556778888877775 4 7899999999998762 2 37877753 3453 456
Q ss_pred cCeEEEccCcchH
Q 011027 289 KKAIVVAAGCWSG 301 (495)
Q Consensus 289 a~~VV~A~G~~s~ 301 (495)
|+.||+|||.++.
T Consensus 222 Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 222 ANAMVVACGGAVN 234 (662)
T ss_dssp CSEEEECCCCBCS
T ss_pred eCEEEECCCcccc
Confidence 7999999998764
No 60
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.09 E-value=1.1e-09 Score=114.02 Aligned_cols=61 Identities=18% Similarity=0.215 Sum_probs=48.7
Q ss_pred eecHHHHHHHHHHHhhh-hccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch
Q 011027 233 QLDAMLAVAYIEKGNRH-FASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~-~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s 300 (495)
.+++..+.+.|.+.+++ .| +.+ ++++|+.+..+ ++++++|.+.+|..+.||.||+|+|.++
T Consensus 120 ~~Dr~~~~~~L~e~Le~~~G----V~I-~~~~V~~L~~e--~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 120 QADRVLYRQAVRTALENQPN----LMI-FQQAVEDLIVE--NDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp EECHHHHHHHHHHHHHTCTT----EEE-EECCEEEEEES--SSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred hCCHHHHHHHHHHHHHhCCC----CEE-EEEEEEEEEec--CCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 56777888888887776 33 676 67899999875 5678889998887777899999999875
No 61
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.09 E-value=4.3e-09 Score=106.32 Aligned_cols=39 Identities=28% Similarity=0.514 Sum_probs=33.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCcc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGAT 121 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~gaS 121 (495)
+||+|||||++|+++|+.|+ ++|++|+|||+++..+|.+
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~-~~G~~V~vlE~~~~~GG~~ 40 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLT-NAGKKVLLLEGGERLGGRA 40 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHH-HTTCCEEEECSSSSSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHH-HcCCeEEEEecCCCccCee
Confidence 69999999999999999998 5999999999975544443
No 62
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.08 E-value=1.5e-10 Score=117.05 Aligned_cols=67 Identities=6% Similarity=-0.042 Sum_probs=54.5
Q ss_pred EEEeCCCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcc
Q 011027 225 AAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCW 299 (495)
Q Consensus 225 ~~~~~~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~ 299 (495)
.+.+|.+|. ..+++.|.+.+++.| ++++++++|++|..++ ++++++|.+.+|+.+.||.||.|++.+
T Consensus 247 ~~~yp~gG~---~~L~~aL~r~~~~~G----g~i~l~t~V~~I~~d~-~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 247 PFIYPLYGL---GGIPEGFSRMCAING----GTFMLNKNVVDFVFDD-DNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp SEEEETTCT---THHHHHHHHHHHHC------CEESSCCEEEEEECT-TSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred ceEEECCCH---HHHHHHHHHHHHHcC----CEEEeCCeEEEEEEec-CCeEEEEEECCCcEEECCEEEECCCcc
Confidence 466788774 688999999988887 5899999999998732 677899999998767789999999876
No 63
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.07 E-value=1.7e-09 Score=112.06 Aligned_cols=62 Identities=23% Similarity=0.259 Sum_probs=48.8
Q ss_pred eecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch
Q 011027 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s 300 (495)
.++...+.+.|.+.+++.. ++.+ ++++|++|..+ ++++++|.+.+|..+.+|.||+|+|.++
T Consensus 119 ~~Dr~~~~~~L~~~Le~~~---GVeI-~~~~Vt~L~~e--~g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 119 QADKKRYREYMKKVCENQE---NLYI-KQEEVVDIIVK--NNQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp EECHHHHHHHHHHHHHTCT---TEEE-EESCEEEEEES--SSBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred hCCHHHHHHHHHHHHHhCC---CCEE-EEeEEEEEEec--CCEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 4567788888888777631 2676 57899999875 6778889999887778899999999864
No 64
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.04 E-value=1.2e-09 Score=106.89 Aligned_cols=211 Identities=10% Similarity=0.039 Sum_probs=101.1
Q ss_pred HHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch-HHHHHHhhh----c-c
Q 011027 238 LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS-GSLMHDLLR----E-T 311 (495)
Q Consensus 238 ~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s-~~l~~~l~~----~-~ 311 (495)
.+++.|.+.. | +.++++++|++|.++ +++ |.|++.+|+.+.+|.||+|+.+.. ..|+..... . .
T Consensus 113 ~l~~~l~~~~---g----~~i~~~~~V~~i~~~--~~~-~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~ 182 (342)
T 3qj4_A 113 SIIKHYLKES---G----AEVYFRHRVTQINLR--DDK-WEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQR 182 (342)
T ss_dssp HHHHHHHHHH---T----CEEESSCCEEEEEEC--SSS-EEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHH
T ss_pred HHHHHHHHhc---C----CEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHH
Confidence 5666665543 3 589999999999885 333 778888887566799999998632 223221000 0 0
Q ss_pred ccccccceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeee--eeee----ccccEEec-cc
Q 011027 312 EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMT--ATTD----VIGNLVLG-SS 384 (495)
Q Consensus 312 ~~~~~~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~g~~~iG-~t 384 (495)
..-..++..++.--++.++.+. .++.+ ..|+... +...+..... ..+. .++..+++ .+
T Consensus 183 ~~l~~~~~~~~~~v~l~~~~~~--~~~~~--~~g~~~~-----------~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~ 247 (342)
T 3qj4_A 183 QQLEAVSYSSRYALGLFYEAGT--KIDVP--WAGQYIT-----------SNPCIRFVSIDNKKRNIESSEIGPSLVIHTT 247 (342)
T ss_dssp HHHHTCCBCCEEEEEEECSSCC----CCS--CSEEECS-----------SCSSEEEEEEHHHHTTCCCC-CCCEEEEEEC
T ss_pred HHHhcCCccccEEEEEEECCCC--ccCCc--eeeEEcc-----------CCcceEEEEccccCCCCCCCCCCceEEEECC
Confidence 0001244444443344443211 11111 1122110 0000110000 0010 11222222 11
Q ss_pred ccccC-CCccccHHHHHHHHHHHHhhcCCcccccccccccCceeeeeeccCCC--CCCcEEeecCCCCcEEEEe-cCCCC
Q 011027 385 RQFAG-FNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRPYMP--DGKPVIGPVPGLSKVFLAT-GHEGL 460 (495)
Q Consensus 385 ~~~~~-~~~~~~~~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~~t~--D~~Piig~~~~~~~l~~~~-G~g~~ 460 (495)
..... .....+++..+.+++.+.++++.+... . .. ..+-|..-.|... +....+. ++..|+|+++. .+.|-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~p-~-~~--~v~rW~~a~p~~~~~~~~~~~~-~~~~~~l~laGd~~~g~ 322 (342)
T 3qj4_A 248 VPFGVTYLEHSIEDVQELVFQQLENILPGLPQP-I-AT--KCQKWRHSQVTNAAANCPGQMT-LHHKPFLACGGDGFTQS 322 (342)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHHHHHSCSCCCC-S-EE--EEEEETTCSBSSCCSSSCSCEE-EETTTEEEECSGGGSCS
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHhccCCCCC-c-ee--eeccccccccccccCCCcceeE-ecCCccEEEEccccCCC
Confidence 11111 111234555678889999999844321 1 11 1123432222211 1111111 13468899876 46677
Q ss_pred ChhhhHHHHHHHHHHHhC
Q 011027 461 GLSLALGTAELVADMVLT 478 (495)
Q Consensus 461 G~~~ap~~a~~la~~i~g 478 (495)
|+--+-..|+.+|+.|..
T Consensus 323 ~v~~ai~sg~~aa~~i~~ 340 (342)
T 3qj4_A 323 NFDGCITSALCVLEALKN 340 (342)
T ss_dssp SHHHHHHHHHHHHHHHTT
T ss_pred CccHHHHHHHHHHHHHHh
Confidence 888899999999998875
No 65
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.03 E-value=1.1e-09 Score=109.45 Aligned_cols=61 Identities=11% Similarity=0.010 Sum_probs=44.7
Q ss_pred cHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEc-CCCe--eeecCeEEEccCcchH
Q 011027 235 DAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT-SKNT--LYSKKAIVVAAGCWSG 301 (495)
Q Consensus 235 ~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~-~~g~--~~~a~~VV~A~G~~s~ 301 (495)
+...+.+.|.+.+.+.| +.++++++|+++..+ +++.+.|++ .+|+ .+.+|.||.|+|.++.
T Consensus 101 ~~~~l~~~L~~~~~~~g----~~i~~~~~v~~i~~~--~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 101 GQTEVTRDLMEAREACG----ATTVYQAAEVRLHDL--QGERPYVTFERDGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp CHHHHHHHHHHHHHHTT----CEEESSCEEEEEECT--TSSSCEEEEEETTEEEEEECSEEEECCCTTCS
T ss_pred chHHHHHHHHHHHHhcC----CeEEeceeEEEEEEe--cCCceEEEEecCCcEEEEEeCEEEECCCCCcH
Confidence 34567778887776654 689999999999764 222345665 5776 5678999999999876
No 66
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.03 E-value=4e-09 Score=109.40 Aligned_cols=66 Identities=15% Similarity=0.183 Sum_probs=51.8
Q ss_pred CceecHHHHHHHHHHHhhh-hccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHH
Q 011027 231 DSQLDAMLAVAYIEKGNRH-FASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGS 302 (495)
Q Consensus 231 ~g~~~p~~~~~~l~~~~~~-~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~ 302 (495)
+..+++..+.+.|.+.+++ .| ++++++ +|+++..++ ++.++.|.+.+|..+.+|.||.|+|.++.-
T Consensus 169 ~~~~~r~~l~~~L~~~a~~~~G----v~i~~~-~v~~i~~~~-~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 169 GYHLNAAKFSQLLTEHCTQKLG----VTHIRD-HVSQIINNQ-HGDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp EEEECHHHHHHHHHHHHHHTSC----CEEEEC-CEEEEEECT-TSCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred eEEEcHHHHHHHHHHHHHhcCC----CEEEEe-EEEEEEecC-CCcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 4568888999999998887 65 688888 699998752 455667888776557789999999998753
No 67
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.03 E-value=3.6e-08 Score=104.52 Aligned_cols=67 Identities=15% Similarity=0.062 Sum_probs=47.2
Q ss_pred eecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecC-CCcEEEEEcC------CC--eeeecCeEEEccCcchH
Q 011027 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNS-TGEVEAVQTS------KN--TLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~-~~~~~~v~~~------~g--~~~~a~~VV~A~G~~s~ 301 (495)
.++...+.+.|.+.+++.|. ++.++++++|+++..+++ ++..+.|++. +| ..+.+|.||.|.|.++.
T Consensus 137 ~i~q~~l~~~L~~~a~~~g~--~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 137 ILNQARVHDHYLERMRNSPS--RLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp ECCHHHHHHHHHHHHHHSTT--CCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH
T ss_pred eeCHHHHHHHHHHHHHhCCC--CcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH
Confidence 45667888899988888651 247889999999987631 1223445432 45 45677999999999886
No 68
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.00 E-value=3.3e-09 Score=110.33 Aligned_cols=63 Identities=19% Similarity=0.238 Sum_probs=48.4
Q ss_pred eecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
.++...+...|.+.+++.. ++.+ .+.+|+.+..+ ++++.+|.+.+|..+.||.||+|+|.++.
T Consensus 113 ~~Dr~~l~~~L~~~l~~~~---GV~I-~~~~V~~L~~d--~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 113 QADKTQYSLYMRRIVEHEP---NIDL-LQDTVIGVSAN--SGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp EECHHHHHHHHHHHHHTCT---TEEE-EECCEEEEEEE--TTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred hcCHHHHHHHHHHHHHhCC---CCEE-EeeEEEEEEec--CCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 5677788888888776531 2666 46699998876 56777788888877778999999998854
No 69
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.00 E-value=4.9e-09 Score=101.00 Aligned_cols=38 Identities=34% Similarity=0.487 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhc-CCccEEEEcCCcCCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVG-SDLSVAVVDKVVPCS 118 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~-~G~~V~liE~~~~~~ 118 (495)
.+||+|||||++|+++|++|+++ .|++|+|||+.....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G 117 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG 117 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC
Confidence 58999999999999999999852 399999999985433
No 70
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.99 E-value=5e-09 Score=107.36 Aligned_cols=226 Identities=16% Similarity=0.103 Sum_probs=110.1
Q ss_pred eEEEeCCCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEc---CCCeeeecCeEEEccCcch
Q 011027 224 RAAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT---SKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 224 ~~~~~~~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~---~~g~~~~a~~VV~A~G~~s 300 (495)
.+.+.+.+|. ..+++.|.+.+ | +.++++++|++|..+ +++ +.|.+ .+|..+.+|.||+|++.+.
T Consensus 228 ~~~~~~~gG~---~~l~~~l~~~l---g----~~i~~~~~V~~i~~~--~~~-~~v~~~~~~~g~~~~ad~vV~a~~~~~ 294 (478)
T 2ivd_A 228 GALSTFDGGL---QVLIDALAASL---G----DAAHVGARVEGLARE--DGG-WRLIIEEHGRRAELSVAQVVLAAPAHA 294 (478)
T ss_dssp CCEEEETTCT---HHHHHHHHHHH---G----GGEESSEEEEEEECC----C-CEEEEEETTEEEEEECSEEEECSCHHH
T ss_pred ccEEEECCCH---HHHHHHHHHHh---h----hhEEcCCEEEEEEec--CCe-EEEEEeecCCCceEEcCEEEECCCHHH
Confidence 4566666664 46777777654 2 378999999999875 333 66776 6676677899999999875
Q ss_pred H-HHHHHhhhcc-ccccccceeecceeEEEEeecCccccccccccccccccccCCCCCCCcccccceeeeee----eeee
Q 011027 301 G-SLMHDLLRET-EIVLDIPVKPRKGHLLVLENFNSLKLNHASMEAGYVGHHDLTLHPGQVNHGQILSISMT----ATTD 374 (495)
Q Consensus 301 ~-~l~~~l~~~~-~~~~~~~l~~~rgq~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 374 (495)
. .|++.+.... ..-..++..++.--.+.++.+. ... . ...++.. |.. .+.....+... +...
T Consensus 295 ~~~ll~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~-~~~--~-~~~~~~~-~~~-------~~~~~~~~~~~s~~~~~~~ 362 (478)
T 2ivd_A 295 TAKLLRPLDDALAALVAGIAYAPIAVVHLGFDAGT-LPA--P-DGFGFLV-PAE-------EQRRMLGAIHASTTFPFRA 362 (478)
T ss_dssp HHHHHTTTCHHHHHHHHTCCBCCEEEEEEEECTTS-SCC--C-CSSEEEC-CGG-------GCCSCCEEEEHHHHCGGGB
T ss_pred HHHHhhccCHHHHHHHhcCCCCcEEEEEEEEcccc-CCC--C-CceEEEe-cCC-------CCCceEEEEEEcccCCCcC
Confidence 3 3443221000 0000112222211222232211 110 0 0111211 000 00000000000 0001
Q ss_pred cccc-E---EecccccccCCCccccHHHHHHHHHHHHhhcCCcccccccccccCceeeeeecc-CCCCCCcEEee----c
Q 011027 375 VIGN-L---VLGSSRQFAGFNTEVEQTIIDRIWKRAAEFYPKLRDLCLADFISNRKVRIGLRP-YMPDGKPVIGP----V 445 (495)
Q Consensus 375 ~~g~-~---~iG~t~~~~~~~~~~~~~~~~~~~~~l~~~~p~l~~~~~~~~~~~~~~~~g~r~-~t~D~~Piig~----~ 445 (495)
+++. + .+++... .......+++..+.+++.+.+++|.... .... ..+.|.+-.+ ++++..+.+.. +
T Consensus 363 p~g~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~--p~~~--~~~~w~~~~p~~~~g~~~~~~~~~~~~ 437 (478)
T 2ivd_A 363 EGGRVLYSCMVGGARQ-PGLVEQDEDALAALAREELKALAGVTAR--PSFT--RVFRWPLGIPQYNLGHLERVAAIDAAL 437 (478)
T ss_dssp STTCEEEEEEEECTTC-GGGGGSCHHHHHHHHHHHHHHHHCCCSC--CSEE--EEEEESSCCBCCBTTHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCCcCC-ccccCCCHHHHHHHHHHHHHHHhCCCCC--CcEE--EEEECCCcccCCCcCHHHHHHHHHHHH
Confidence 1222 2 2333221 1111122345567888999999986432 1111 1234554443 44554332221 1
Q ss_pred CCCCcEEEEecC-CCCChhhhHHHHHHHHHHHhCC
Q 011027 446 PGLSKVFLATGH-EGLGLSLALGTAELVADMVLTN 479 (495)
Q Consensus 446 ~~~~~l~~~~G~-g~~G~~~ap~~a~~la~~i~g~ 479 (495)
...+|||++... .+.|+.-|...|+.+|+.|++.
T Consensus 438 ~~~~~l~~aG~~~~g~gv~gA~~SG~~aA~~i~~~ 472 (478)
T 2ivd_A 438 QRLPGLHLIGNAYKGVGLNDCIRNAAQLADALVAG 472 (478)
T ss_dssp HTSTTEEECSTTTSCCSHHHHHHHHHHHHHHHCC-
T ss_pred hhCCCEEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 114799999887 4678888999999999999764
No 71
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.99 E-value=1e-08 Score=104.19 Aligned_cols=68 Identities=12% Similarity=0.139 Sum_probs=52.3
Q ss_pred eCCCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHH
Q 011027 228 LPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSL 303 (495)
Q Consensus 228 ~~~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l 303 (495)
+|.+|. ..+++.|.+.+++.| ++++++++|++|..+.+++++++|.+. |..+.||.||+|+|.|+..+
T Consensus 236 ~p~gG~---~~l~~al~~~~~~~G----~~i~~~~~V~~i~~~~~~~~~~~V~~~-g~~~~ad~VV~a~~~~~~~l 303 (453)
T 2bcg_G 236 YPMYGL---GELPQGFARLSAIYG----GTYMLDTPIDEVLYKKDTGKFEGVKTK-LGTFKAPLVIADPTYFPEKC 303 (453)
T ss_dssp EETTCT---THHHHHHHHHHHHTT----CEEECSCCCCEEEEETTTTEEEEEEET-TEEEECSCEEECGGGCGGGE
T ss_pred eeCCCH---HHHHHHHHHHHHHcC----CEEECCCEEEEEEEECCCCeEEEEEEC-CeEEECCEEEECCCccchhh
Confidence 666664 478899998888876 589999999999875113566778775 66667899999999997644
No 72
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.97 E-value=3.1e-09 Score=104.20 Aligned_cols=60 Identities=15% Similarity=0.231 Sum_probs=46.3
Q ss_pred cHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEE-EEcCCCeeeecCeEEEccCcchHH
Q 011027 235 DAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEA-VQTSKNTLYSKKAIVVAAGCWSGS 302 (495)
Q Consensus 235 ~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~-v~~~~g~~~~a~~VV~A~G~~s~~ 302 (495)
....+.+.+.+.+++.+ +.++++++|+++..+ ++ .|. |++.++. +.+|.||+|+|.++..
T Consensus 74 ~~~~~~~~l~~~~~~~~----~~~~~~~~v~~i~~~--~~-~~~~v~~~~g~-~~~d~vV~AtG~~~~~ 134 (357)
T 4a9w_A 74 ARAEVLAYLAQYEQKYA----LPVLRPIRVQRVSHF--GE-RLRVVARDGRQ-WLARAVISATGTWGEA 134 (357)
T ss_dssp BHHHHHHHHHHHHHHTT----CCEECSCCEEEEEEE--TT-EEEEEETTSCE-EEEEEEEECCCSGGGB
T ss_pred CHHHHHHHHHHHHHHcC----CEEEcCCEEEEEEEC--CC-cEEEEEeCCCE-EEeCEEEECCCCCCCC
Confidence 34567777777777765 688999999999875 33 577 8888884 5579999999987653
No 73
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.97 E-value=7.7e-10 Score=115.12 Aligned_cols=36 Identities=39% Similarity=0.572 Sum_probs=32.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.++|+||||||.+||++|..|+++.+++|+|||++.
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 369999999999999999999865789999999975
No 74
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.95 E-value=1.5e-08 Score=101.29 Aligned_cols=58 Identities=10% Similarity=-0.133 Sum_probs=43.1
Q ss_pred cHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 235 DAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 235 ~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
....+.+.|.+.+. + +.++++++|+++..+ ++. +.|++.+|+.+.+|.||.|+|.++.
T Consensus 97 ~~~~l~~~L~~~~~--~----~~i~~~~~v~~i~~~--~~~-v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 97 SYDSIYGGLYELFG--P----ERYHTSKCLVGLSQD--SET-VQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EHHHHHHHHHHHHC--S----TTEETTCCEEEEEEC--SSC-EEEEETTSCEEEESEEEECCCTTCH
T ss_pred CHHHHHHHHHHhCC--C----cEEEcCCEEEEEEec--CCE-EEEEECCCCEEECCEEEECCCcchh
Confidence 33456666666542 2 588999999999875 333 5688888877778999999999875
No 75
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.94 E-value=9.5e-09 Score=98.44 Aligned_cols=38 Identities=39% Similarity=0.596 Sum_probs=33.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcC--CccEEEEcCCcCCCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGS--DLSVAVVDKVVPCSG 119 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~--G~~V~liE~~~~~~g 119 (495)
.+||+|||||++|+++|++|++ . |++|+|+|++....|
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~-~~~g~~V~v~e~~~~~gg 104 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAK-NRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHH-HCTTSCEEEECSSSSCCT
T ss_pred cCCEEEECccHHHHHHHHHHHh-cCCCCeEEEEecCccccc
Confidence 5799999999999999999985 6 999999999865443
No 76
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.92 E-value=1.7e-08 Score=100.08 Aligned_cols=60 Identities=12% Similarity=0.022 Sum_probs=48.3
Q ss_pred ceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 232 SQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 232 g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
..++...+.+.|.+.+.+.| ++++++++|+++.. ++ .|++.+|+.+.+|.||.|+|.++.
T Consensus 102 ~~~~r~~l~~~L~~~~~~~g----v~i~~~~~v~~i~~---~~---~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 102 RIMTRSHLHDALVNRARALG----VDISVNSEAVAADP---VG---RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp EEEEHHHHHHHHHHHHHHTT----CEEESSCCEEEEET---TT---EEEETTSCEEECSEEEECCCTTCH
T ss_pred EEECHHHHHHHHHHHHHhcC----CEEEeCCEEEEEEe---CC---EEEECCCCEEEcCEEEECCCccHH
Confidence 45677788999998888765 68999999999975 23 567777877778999999999875
No 77
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.91 E-value=1.3e-08 Score=93.76 Aligned_cols=61 Identities=20% Similarity=0.146 Sum_probs=47.1
Q ss_pred cHHHHHHHHHHHhhhh-ccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHH
Q 011027 235 DAMLAVAYIEKGNRHF-ASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGS 302 (495)
Q Consensus 235 ~p~~~~~~l~~~~~~~-g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~ 302 (495)
++..+.+.|.+.+++. | +.++ +++|+++..+ +++++.|.+.+|..+.+|.||+|+|.++..
T Consensus 66 ~~~~~~~~l~~~~~~~~g----v~i~-~~~v~~i~~~--~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRP----LHLF-QATATGLLLE--GNRVVGVRTWEGPPARGEKVVLAVGSFLGA 127 (232)
T ss_dssp CHHHHHHHHHHHHHTCTT----EEEE-ECCEEEEEEE--TTEEEEEEETTSCCEECSEEEECCTTCSSC
T ss_pred CHHHHHHHHHHHHHcCCC----cEEE-EeEEEEEEEe--CCEEEEEEECCCCEEECCEEEECCCCChhh
Confidence 4556777777777765 3 6666 6799999876 566778888888767789999999998653
No 78
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.88 E-value=2.9e-08 Score=99.10 Aligned_cols=60 Identities=8% Similarity=0.051 Sum_probs=45.2
Q ss_pred eecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
.++...+.+.|.+.+.. +.++++++|+++..+ ++. +.|++.+|+.+.+|.||.|+|.++.
T Consensus 124 ~i~r~~l~~~L~~~~~~------~~i~~~~~v~~i~~~--~~~-v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 124 EINRNDLRAILLNSLEN------DTVIWDRKLVMLEPG--KKK-WTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp EECHHHHHHHHHHTSCT------TSEEESCCEEEEEEC--SSS-EEEEETTSCCEEESEEEECSCTTCS
T ss_pred eECHHHHHHHHHhhcCC------CEEEECCEEEEEEEC--CCE-EEEEECCCcEEecCEEEECCCcchh
Confidence 35566778888776542 377889999999875 333 5688888876778999999999874
No 79
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.86 E-value=1.2e-08 Score=98.46 Aligned_cols=56 Identities=14% Similarity=0.209 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcc
Q 011027 236 AMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCW 299 (495)
Q Consensus 236 p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~ 299 (495)
+..+...+.+.+++.+ +.+++ ++|+++..+ ++.+.|.+.++..+.+|.||+|+|..
T Consensus 69 ~~~~~~~~~~~~~~~~----v~~~~-~~v~~i~~~---~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 69 ASDMIKVFNKHIEKYE----VPVLL-DIVEKIENR---GDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHHHTTT----CCEEE-SCEEEEEEC-----CEEEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHHHcC----CEEEE-EEEEEEEec---CCEEEEEECCCCEEEcCEEEECcCCC
Confidence 3455666666666654 57777 899999874 23467888887767789999999986
No 80
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.84 E-value=1.5e-07 Score=94.90 Aligned_cols=67 Identities=10% Similarity=0.120 Sum_probs=53.0
Q ss_pred EEeCCCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHH
Q 011027 226 AFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGS 302 (495)
Q Consensus 226 ~~~~~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~ 302 (495)
+++|.+| ...+++.|.+.+++.| ++++++++|++|..+ ++++++|.+ +|+.+.+|.||+|+|.+...
T Consensus 226 ~~~p~gG---~~~l~~~l~~~~~~~G----~~i~~~~~V~~I~~~--~~~v~~v~~-~g~~~~ad~VV~a~~~~~~~ 292 (433)
T 1d5t_A 226 YLYPLYG---LGELPQGFARLSAIYG----GTYMLNKPVDDIIME--NGKVVGVKS-EGEVARCKQLICDPSYVPDR 292 (433)
T ss_dssp EEEETTC---TTHHHHHHHHHHHHHT----CCCBCSCCCCEEEEE--TTEEEEEEE-TTEEEECSEEEECGGGCGGG
T ss_pred EEEeCcC---HHHHHHHHHHHHHHcC----CEEECCCEEEEEEEe--CCEEEEEEE-CCeEEECCEEEECCCCCccc
Confidence 5677777 3588899988888876 588999999999876 566776775 56666789999999999753
No 81
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.84 E-value=1.7e-08 Score=104.34 Aligned_cols=41 Identities=34% Similarity=0.386 Sum_probs=35.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCc
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGA 120 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~ga 120 (495)
+.+||||||||++||++|+.|++..|++|+|||+++..+|.
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~ 49 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGL 49 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCC
Confidence 36899999999999999999985469999999998665553
No 82
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.84 E-value=8.9e-09 Score=100.17 Aligned_cols=36 Identities=22% Similarity=0.238 Sum_probs=32.2
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 79 CHTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 79 ~~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+.+||+|||||++|+++|+.|+ ++|++|+|||+..
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~-~~g~~v~vie~~~ 55 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLA-RAEIKPILYEGMM 55 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHH-HTTCCCEEECCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHH-HCCCCEEEEecCC
Confidence 34689999999999999999998 5899999999964
No 83
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.83 E-value=2e-08 Score=95.73 Aligned_cols=34 Identities=41% Similarity=0.509 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+||+|||||++|+++|+.|+ +.|++|+|||++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~-~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLG-RARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHH-HTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHH-hCCCCEEEEeCCC
Confidence 479999999999999999998 5999999999864
No 84
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.81 E-value=3.5e-08 Score=97.04 Aligned_cols=60 Identities=17% Similarity=0.197 Sum_probs=45.1
Q ss_pred cHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch
Q 011027 235 DAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 235 ~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s 300 (495)
++..+.+.+.+.+++.+ +.++++++|+++..+ ++..|.|.+.+|+.+.+|.||+|+|..+
T Consensus 72 ~~~~~~~~l~~~~~~~~----~~~~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 72 PAIDLVESLWAQAERYN----PDVVLNETVTKYTKL--DDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp EHHHHHHHHHHHHHTTC----CEEECSCCEEEEEEC--TTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred CHHHHHHHHHHHHHHhC----CEEEcCCEEEEEEEC--CCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 45567777777776654 578889999999875 3334778888886677799999999853
No 85
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.80 E-value=2.4e-08 Score=99.87 Aligned_cols=43 Identities=12% Similarity=0.025 Sum_probs=34.9
Q ss_pred eEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 257 AEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 257 ~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
.++++++|+++...+ ++ .+.|++.+|+.+.+|.||-|.|.+|.
T Consensus 125 ~v~~~~~v~~~~~~~-~~-~v~v~~~dG~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 125 TIQWNKTFVRYEHIE-NG-GIKIFFADGSHENVDVLVGADGSNSK 167 (412)
T ss_dssp TEECSCCEEEEEECT-TS-CEEEEETTSCEEEESEEEECCCTTCH
T ss_pred eEEEEEEEEeeeEcC-CC-eEEEEECCCCEEEeeEEEECCCCCcc
Confidence 678899999998753 33 35688899988888999999999875
No 86
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.80 E-value=2.1e-08 Score=97.18 Aligned_cols=58 Identities=16% Similarity=0.173 Sum_probs=45.1
Q ss_pred cHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcc
Q 011027 235 DAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCW 299 (495)
Q Consensus 235 ~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~ 299 (495)
.+..+...+.+.+++.+ +.++++++|+++... ++..|.|.+.+|+ +.+|.||+|+|..
T Consensus 65 ~~~~~~~~~~~~~~~~~----~~~~~~~~v~~i~~~--~~~~~~v~~~~g~-~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 65 RAQELINNLKEQMAKFD----QTICLEQAVESVEKQ--ADGVFKLVTNEET-HYSKTVIITAGNG 122 (332)
T ss_dssp EHHHHHHHHHHHHTTSC----CEEECSCCEEEEEEC--TTSCEEEEESSEE-EEEEEEEECCTTS
T ss_pred CHHHHHHHHHHHHHHhC----CcEEccCEEEEEEEC--CCCcEEEEECCCE-EEeCEEEECCCCC
Confidence 45677777777777664 688899999999875 3335788888887 5579999999984
No 87
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.79 E-value=5.7e-08 Score=94.45 Aligned_cols=58 Identities=24% Similarity=0.177 Sum_probs=44.4
Q ss_pred cHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcc
Q 011027 235 DAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCW 299 (495)
Q Consensus 235 ~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~ 299 (495)
.+..+...+.+.+++.+ +.++++++|+++..+ ++ .|.|.+.+|..+.+|.||+|+|..
T Consensus 63 ~~~~~~~~l~~~~~~~~----~~~~~~~~v~~i~~~--~~-~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 63 YAKDLVKGLVEQVAPFN----PVYSLGERAETLERE--GD-LFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp EHHHHHHHHHHHHGGGC----CEEEESCCEEEEEEE--TT-EEEEEETTSCEEEEEEEEECCTTS
T ss_pred CHHHHHHHHHHHHHHcC----CEEEeCCEEEEEEEC--CC-EEEEEECCCCEEEeCEEEECCCCC
Confidence 45567777777776654 578889999999876 33 577888888666679999999985
No 88
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.79 E-value=6.5e-10 Score=104.41 Aligned_cols=42 Identities=14% Similarity=0.033 Sum_probs=35.5
Q ss_pred Eeeceeecccccccccccccccceee-eecCCCCCcccc-cccc
Q 011027 14 TLQESVNVWGSRGRRQSCRTSAAFAF-KSSFFGKKPLSL-SVNK 55 (495)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~l~~~gf~~-k~~g~g~kr~~l-~~~~ 55 (495)
.-+.+++|||+||.|||+|+++||.| |+||||+||||+ |+.+
T Consensus 217 ~pgg~laTYtaag~VRR~L~~aGF~V~k~~G~g~KReml~A~~~ 260 (308)
T 3vyw_A 217 DEKGYWVSYSSSLSVRKSLLTLGFKVGSSREIGRKRKGTVASLK 260 (308)
T ss_dssp EEEEEEEESCCCHHHHHHHHHTTCEEEEEECC---CEEEEEESS
T ss_pred CCCcEEEEEeCcHHHHHHHHHCCCEEEecCCCCCCCceeEEecC
Confidence 34778999999999999999999999 999999999999 8653
No 89
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.79 E-value=2.3e-08 Score=107.46 Aligned_cols=38 Identities=42% Similarity=0.528 Sum_probs=33.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSG 119 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~g 119 (495)
.+||+|||||++|+++|+.|+ +.|++|+|+|++...+|
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~-~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLH-NFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHH-HHTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHH-HCCCcEEEEecccceec
Confidence 589999999999999999998 58999999999755444
No 90
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.79 E-value=9.8e-09 Score=106.81 Aligned_cols=81 Identities=20% Similarity=0.221 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHHhhhccccccc
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHDLLRETEIVLD 316 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~l~~~~~~~~~ 316 (495)
..+.+++...+++.+- +..++++++|+++..++ +...|.|++.+|+.+.+|.||+|+|.++....+.
T Consensus 94 ~~i~~yl~~~~~~~~l--~~~i~~~~~V~~~~~~~-~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~---------- 160 (542)
T 1w4x_A 94 PEILRYINFVADKFDL--RSGITFHTTVTAAAFDE-ATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPN---------- 160 (542)
T ss_dssp HHHHHHHHHHHHHTTG--GGGEECSCCEEEEEEET-TTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCC----------
T ss_pred HHHHHHHHHHHHHcCC--CceEEcCcEEEEEEEcC-CCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCC----------
Confidence 3455555555555431 13678899999998763 3457889998887677899999999886543332
Q ss_pred cc-eeecceeEEEEe
Q 011027 317 IP-VKPRKGHLLVLE 330 (495)
Q Consensus 317 ~~-l~~~rgq~~~~~ 330 (495)
+| +.+.+|++++..
T Consensus 161 i~G~~~f~G~~~hs~ 175 (542)
T 1w4x_A 161 FPGLKDFAGNLYHTG 175 (542)
T ss_dssp CTTGGGCCSEEEEGG
T ss_pred CCCcccCCCceEECC
Confidence 22 344567666543
No 91
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.79 E-value=3e-08 Score=95.12 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
.+||+|||||.+|+++|+.|+ +.|++|+|||++.+
T Consensus 6 ~yDVvIIGaGpAGlsAA~~la-r~g~~v~lie~~~~ 40 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLG-RARKQIALFDNNTN 40 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSCC
T ss_pred CcCEEEECCCHHHHHHHHHHH-HCCCCEEEEeCCCC
Confidence 699999999999999999998 59999999999743
No 92
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.78 E-value=3e-07 Score=97.68 Aligned_cols=34 Identities=47% Similarity=0.652 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhc-----CCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVG-----SDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~-----~G~~V~liE~~~ 115 (495)
.+||+|||||++|+++|+.|+ + .|++|+||||..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La-~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLS-EYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HHHHHSTTCCEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHh-ccccccCCCCEEEEeCCC
Confidence 589999999999999999998 6 899999999973
No 93
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.76 E-value=6.8e-08 Score=99.37 Aligned_cols=58 Identities=10% Similarity=0.059 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s 300 (495)
..+++.|.+.+.+.| +++++++++|++|..+ ++. +.|++.+|+.+.+|+||+|+|...
T Consensus 255 ~~l~~~l~~~l~~~g---~~~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGTG---RLGYVFGCPVRSVVNE--RDA-ARVTARDGREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTTT---CEEEESSCCEEEEEEC--SSS-EEEEETTCCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhcC---ceEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcCEEEECCCHHH
Confidence 467888887776543 2579999999999875 333 568888886667799999999854
No 94
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.76 E-value=3.9e-09 Score=109.64 Aligned_cols=35 Identities=37% Similarity=0.588 Sum_probs=32.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
++|+||||||.+|+.+|..|++..|++|+|||++.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~ 36 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGV 36 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCC
Confidence 58999999999999999999855899999999974
No 95
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.75 E-value=5.1e-08 Score=100.18 Aligned_cols=64 Identities=14% Similarity=-0.004 Sum_probs=45.9
Q ss_pred ecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEc--C-CC--eeeecCeEEEccCcchH
Q 011027 234 LDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQT--S-KN--TLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 234 ~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~--~-~g--~~~~a~~VV~A~G~~s~ 301 (495)
++...+.+.|.+.+++.| +.++++++|+++..+++++..+.|.+ . +| ..+.+|.||+|+|..+.
T Consensus 163 ~~~~~l~~~L~~~~~~~g----v~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 163 ISIRQLQLLLLKVALLLG----VEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp EEHHHHHHHHHHHHHHTT----CEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred CCHHHHHHHHHHHHHhCC----CEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 344677788888777755 78999999999986421233466665 4 56 45667999999999764
No 96
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.75 E-value=1.4e-07 Score=94.62 Aligned_cols=62 Identities=13% Similarity=0.027 Sum_probs=44.3
Q ss_pred eecHHHHHHHHHHHhhhh-ccCCceeEEecCceeEEEEecCCCcEEEEEcCC---C--eeeecCeEEEccCcchH
Q 011027 233 QLDAMLAVAYIEKGNRHF-ASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK---N--TLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~~-g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~---g--~~~~a~~VV~A~G~~s~ 301 (495)
.++...+.+.|.+.+.+. | .+.++++++|+++.. + ++ +.|.+.+ | ..+.+|.||.|.|.++.
T Consensus 103 ~i~r~~l~~~L~~~~~~~~g---~~~v~~~~~v~~i~~-~-~~--v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 103 SIHRGELQMILLAAVRERLG---QQAVRTGLGVERIEE-R-DG--RVLIGARDGHGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp EEEHHHHHHHHHHHHHHHHC---TTSEEESEEEEEEEE-E-TT--EEEEEEEETTSCEEEEEESEEEECCCTTCH
T ss_pred eeeHHHHHHHHHHHHHhhCC---CcEEEECCEEEEEec-C-Cc--cEEEEecCCCCCceEEecCEEEECCCccch
Confidence 456667888888877653 3 147889999999977 3 43 3454433 6 45678999999999875
No 97
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.75 E-value=8.3e-08 Score=98.41 Aligned_cols=58 Identities=9% Similarity=0.044 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
..+.+.+.+.+++.| ++++++++|+++..+ +++ +.|.+.+|+.+.+|.||+|+|....
T Consensus 232 ~~~~~~l~~~l~~~G----v~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKG----ISIIYEATVSQVQST--ENC-YNVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp HHHHHHHHHHHHHHT----CEEESSCCEEEEEEC--SSS-EEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHCC----CEEEeCCEEEEEEee--CCE-EEEEECCCcEEEcCEEEEeeCCCcC
Confidence 356677777777766 799999999999875 344 4678888876778999999998554
No 98
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.75 E-value=2.5e-08 Score=103.82 Aligned_cols=35 Identities=31% Similarity=0.569 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCC-ccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSD-LSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G-~~V~liE~~~~ 116 (495)
++|+||||||.+||++|..|++ .| ++|+|||++..
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse-~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAE-NPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTT-STTSCEEEECSSCS
T ss_pred cccEEEECCcHHHHHHHHHHHh-CCCCcEEEEecCCC
Confidence 6999999999999999999985 55 89999999743
No 99
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.73 E-value=1.5e-08 Score=105.10 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
++|+||||||.+|+.+|..|+++.|++|+|||++.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 69999999999999999999865789999999974
No 100
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.72 E-value=2.7e-08 Score=98.10 Aligned_cols=61 Identities=20% Similarity=0.276 Sum_probs=45.0
Q ss_pred eecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
.+.+..+...+.+.+++.| +.++++++|+++..+ ++ .|.|.+.++. +.+|.||+|+|.+..
T Consensus 84 ~~~~~~~~~~l~~~~~~~g----v~i~~~~~v~~i~~~--~~-~~~v~~~~g~-~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 84 HISGETYAEYLQVVANHYE----LNIFENTVVTNISAD--DA-YYTIATTTET-YHADYIFVATGDYNF 144 (369)
T ss_dssp SCBHHHHHHHHHHHHHHTT----CEEECSCCEEEEEEC--SS-SEEEEESSCC-EEEEEEEECCCSTTS
T ss_pred CCCHHHHHHHHHHHHHHcC----CeEEeCCEEEEEEEC--CC-eEEEEeCCCE-EEeCEEEECCCCCCc
Confidence 3455667777777777665 688899999999875 22 3678877775 456999999999753
No 101
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.72 E-value=3.2e-08 Score=102.64 Aligned_cols=65 Identities=12% Similarity=0.146 Sum_probs=48.0
Q ss_pred cHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHH
Q 011027 235 DAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGS 302 (495)
Q Consensus 235 ~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~ 302 (495)
....+...+.+.+++.+.. -.++++++|+++..++ +...|.|++.+|+.+.+|.||+|+|.++..
T Consensus 85 ~~~ei~~yl~~~~~~~~l~--~~i~~~~~V~~~~~~~-~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 85 SQPEMLRYVNRAADAMDVR--KHYRFNTRVTAARYVE-NDRLWEVTLDNEEVVTCRFLISATGPLSAS 149 (545)
T ss_dssp BHHHHHHHHHHHHHHHTCG--GGEECSCCEEEEEEEG-GGTEEEEEETTTEEEEEEEEEECCCSCBC-
T ss_pred CHHHHHHHHHHHHHHcCCc--CcEEECCEEEEEEEeC-CCCEEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 4456667777777766511 1678899999998764 445789999999777789999999976543
No 102
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.71 E-value=8.2e-08 Score=92.22 Aligned_cols=60 Identities=12% Similarity=0.194 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s 300 (495)
..+.+.+.+.+++.+ +.++.+++|+.+..+.+++..|.|.+.+|+.+.+|.||+|+|...
T Consensus 56 ~~~~~~~~~~~~~~~----v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 56 QKLAGALKVHVDEYD----VDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHHHHHHHTSC----EEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcC----CeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 345555555555544 688889999998754222335788888886667799999999864
No 103
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.71 E-value=2.6e-08 Score=103.51 Aligned_cols=36 Identities=33% Similarity=0.518 Sum_probs=32.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
.+|++|||+|++|+++|++|+++.|.+|+|||++..
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~ 48 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPD 48 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCc
Confidence 689999999999999999998533999999999854
No 104
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.71 E-value=7.8e-08 Score=99.65 Aligned_cols=66 Identities=21% Similarity=0.217 Sum_probs=49.2
Q ss_pred ecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHH
Q 011027 234 LDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGS 302 (495)
Q Consensus 234 ~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~ 302 (495)
.+...+.+.+.+.+++.+.. ..++++++|+++..++ ++..|.|++.+|+.+.+|.||+|+|.++..
T Consensus 84 ~~~~ei~~~l~~~~~~~g~~--~~i~~~~~V~~i~~~~-~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p 149 (540)
T 3gwf_A 84 ITQPEILEYLEDVVDRFDLR--RHFKFGTEVTSALYLD-DENLWEVTTDHGEVYRAKYVVNAVGLLSAI 149 (540)
T ss_dssp EEHHHHHHHHHHHHHHTTCG--GGEEESCCEEEEEEET-TTTEEEEEETTSCEEEEEEEEECCCSCCSB
T ss_pred CCHHHHHHHHHHHHHHcCCc--ceeEeccEEEEEEEeC-CCCEEEEEEcCCCEEEeCEEEECCcccccC
Confidence 34456677777777776511 1688899999998763 445789999999877789999999987643
No 105
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.71 E-value=1.4e-07 Score=82.85 Aligned_cols=62 Identities=11% Similarity=-0.004 Sum_probs=44.9
Q ss_pred cHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHH
Q 011027 235 DAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHD 306 (495)
Q Consensus 235 ~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~ 306 (495)
.+..+.+.+.+.+++.| ++++++ +|+++..+ ++. +.|++.+| .+.+|.||+|+|..+. +...
T Consensus 54 ~~~~~~~~l~~~~~~~g----v~v~~~-~v~~i~~~--~~~-~~v~~~~g-~i~ad~vI~A~G~~~~-~~~~ 115 (180)
T 2ywl_A 54 SGEELLRRLEAHARRYG----AEVRPG-VVKGVRDM--GGV-FEVETEEG-VEKAERLLLCTHKDPT-LPSL 115 (180)
T ss_dssp CHHHHHHHHHHHHHHTT----CEEEEC-CCCEEEEC--SSS-EEEECSSC-EEEEEEEEECCTTCCH-HHHH
T ss_pred CHHHHHHHHHHHHHHcC----CEEEeC-EEEEEEEc--CCE-EEEEECCC-EEEECEEEECCCCCCC-cccc
Confidence 34456677777777665 688888 99999875 232 67888888 5567999999999864 4444
No 106
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.70 E-value=8.4e-08 Score=92.16 Aligned_cols=58 Identities=9% Similarity=0.110 Sum_probs=40.7
Q ss_pred cHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch
Q 011027 235 DAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 235 ~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s 300 (495)
++..+.+.+.+.+.+.+ +.++. ++|+++..+ ++ .|.|.+.+|..+.+|.||+|+|...
T Consensus 57 ~~~~~~~~l~~~~~~~~----v~~~~-~~v~~i~~~--~~-~~~v~~~~g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 57 SGLDFMQPWQEQCFRFG----LKHEM-TAVQRVSKK--DS-HFVILAEDGKTFEAKSVIIATGGSP 114 (311)
T ss_dssp CHHHHHHHHHHHHHTTS----CEEEC-SCEEEEEEE--TT-EEEEEETTSCEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHcC----CEEEE-EEEEEEEEc--CC-EEEEEEcCCCEEECCEEEECCCCCC
Confidence 34456666666666554 56666 789998875 33 4667777777677899999999754
No 107
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.68 E-value=1.7e-07 Score=96.90 Aligned_cols=66 Identities=15% Similarity=0.081 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcE--EEEEcCCCe-eeecCeEEEccCcchHH--HHHH
Q 011027 236 AMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEV--EAVQTSKNT-LYSKKAIVVAAGCWSGS--LMHD 306 (495)
Q Consensus 236 p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~--~~v~~~~g~-~~~a~~VV~A~G~~s~~--l~~~ 306 (495)
+..+.+.+.+.+++.| ++++++++|+++..++ ++++ +.|.+.+|+ .+.+|.||+|+|...+. ++..
T Consensus 254 ~~~~~~~l~~~l~~~G----V~i~~~~~V~~i~~~~-~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~ 324 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQG----MEIISGSNVTRIEEDA-NGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKI 324 (523)
T ss_dssp SHHHHHHHHHHHHHTT----CEEESSCEEEEEEECT-TSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHH
T ss_pred cHHHHHHHHHHHHhCC----cEEEECCEEEEEEEcC-CCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHH
Confidence 3467777777777766 7999999999998642 3333 567778886 67789999999987664 4454
No 108
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.68 E-value=2.1e-07 Score=94.42 Aligned_cols=61 Identities=8% Similarity=-0.087 Sum_probs=44.3
Q ss_pred ecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCC---Ce---eeecCeEEEccCcchH
Q 011027 234 LDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSK---NT---LYSKKAIVVAAGCWSG 301 (495)
Q Consensus 234 ~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~---g~---~~~a~~VV~A~G~~s~ 301 (495)
.....+.+.|.+.+++.+ ..++++++|+++... + ..|.|++.+ |+ .+.+|.||+|+|+++.
T Consensus 112 ~~~~~l~~~l~~~~~~~~----~~i~~~t~V~~v~~~--~-~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 112 PHRHTIQEYQRIYAQPLL----PFIKLATDVLDIEKK--D-GSWVVTYKGTKAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp CBHHHHHHHHHHHHGGGG----GGEECSEEEEEEEEE--T-TEEEEEEEESSTTCCEEEEEESEEEECCCSSSS
T ss_pred CCHHHHHHHHHHHHHHhh----CeEEeCCEEEEEEeC--C-CeEEEEEeecCCCCeeEEEEeCEEEECCCCCCC
Confidence 344567777777776654 467889999999875 3 347777654 55 5667999999999764
No 109
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.68 E-value=1.1e-07 Score=98.77 Aligned_cols=64 Identities=25% Similarity=0.243 Sum_probs=48.4
Q ss_pred cHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 235 DAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 235 ~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
+...+...+.+.+++.+.. ..++++++|+++..++ +...|.|++.+|+.+.+|.||+|+|.++.
T Consensus 97 ~~~ei~~yl~~~~~~~g~~--~~i~~~~~V~~i~~~~-~~~~w~V~~~~G~~i~ad~lV~AtG~~s~ 160 (549)
T 4ap3_A 97 TQPEILAYLEHVADRFDLR--RDIRFDTRVTSAVLDE-EGLRWTVRTDRGDEVSARFLVVAAGPLSN 160 (549)
T ss_dssp BHHHHHHHHHHHHHHTTCG--GGEECSCCEEEEEEET-TTTEEEEEETTCCEEEEEEEEECCCSEEE
T ss_pred CHHHHHHHHHHHHHHcCCC--ccEEECCEEEEEEEcC-CCCEEEEEECCCCEEEeCEEEECcCCCCC
Confidence 4456677777777776511 1678899999998764 44578999999987778999999997654
No 110
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.67 E-value=2.6e-07 Score=96.16 Aligned_cols=34 Identities=29% Similarity=0.517 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+||+|||||++|+++|+.|+ +.|++|+||||..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La-~~G~~V~vlEr~~ 59 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLA-HRQVGHLVVEQTD 59 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HTTCCEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHH-HCCCCEEEEeCCC
Confidence 579999999999999999998 5999999999974
No 111
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.63 E-value=2.5e-07 Score=94.30 Aligned_cols=58 Identities=5% Similarity=-0.005 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEE-cCCCeeeecCeEEEccCcchH
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQ-TSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~-~~~g~~~~a~~VV~A~G~~s~ 301 (495)
..+.+.+.+.+++.| ++++.+++|+++..+ +++.+.|. +.+|+ +.+|.||+|+|...+
T Consensus 211 ~~~~~~l~~~l~~~G----v~i~~~~~v~~i~~~--~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 211 QDMRRGLHAAMEEKG----IRILCEDIIQSVSAD--ADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp HHHHHHHHHHHHHTT----CEEECSCCEEEEEEC--TTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCC----CEEECCCEEEEEEEc--CCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 456677777777765 799999999999875 33335688 88888 778999999998654
No 112
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.62 E-value=1.7e-07 Score=90.43 Aligned_cols=35 Identities=46% Similarity=0.696 Sum_probs=31.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+||+|||||++|+++|+.|+ +.|++|+|||+..
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~-~~g~~v~lie~~~ 49 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAA-RSGFSVAILDKAV 49 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHH-HTTCCEEEEESSS
T ss_pred CCCcEEEECcCHHHHHHHHHHH-hCCCcEEEEeCCC
Confidence 3689999999999999999998 5899999999953
No 113
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.60 E-value=1.1e-06 Score=89.05 Aligned_cols=39 Identities=41% Similarity=0.497 Sum_probs=33.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGA 120 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~ga 120 (495)
.+||+|||||++|+++|+.|+ +.|++|+|+|++...+|.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~-~~g~~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALR-KAGLSVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSSSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHH-HCCCcEEEEECCCCCCCc
Confidence 579999999999999999998 589999999998554443
No 114
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.59 E-value=2.3e-07 Score=94.50 Aligned_cols=65 Identities=11% Similarity=0.045 Sum_probs=46.7
Q ss_pred eecHHHHHHHHHHHhhhhccCCcee--EEecCceeEEEEecCCCcEEEEEcCC---C--eeeecCeEEEccCcchHH
Q 011027 233 QLDAMLAVAYIEKGNRHFASKGRYA--EFYHDPVTCLLRSNSTGEVEAVQTSK---N--TLYSKKAIVVAAGCWSGS 302 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~~g~~~~~~--~~~~~~V~~l~~~~~~~~~~~v~~~~---g--~~~~a~~VV~A~G~~s~~ 302 (495)
.+....+.+.+.+.+++.+ +. ++++++|+++...+ ++..|.|++.+ | ..+.+|.||+|+|+++..
T Consensus 97 ~~~~~~l~~~l~~~~~~~g----v~~~i~~~~~V~~v~~~~-~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p 168 (464)
T 2xve_A 97 YPPREVLWDYIKGRVEKAG----VRKYIRFNTAVRHVEFNE-DSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTP 168 (464)
T ss_dssp SCBHHHHHHHHHHHHHHHT----CGGGEECSEEEEEEEEET-TTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSB
T ss_pred CCCHHHHHHHHHHHHHHcC----CcceEEeCCEEEEEEEcC-CCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCC
Confidence 3455677888888777765 44 78899999998763 33357777654 4 455679999999986643
No 115
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.58 E-value=8e-07 Score=90.63 Aligned_cols=58 Identities=10% Similarity=0.011 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 236 AMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 236 p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
+..+.+.+.+.+++.| ++++++++|+++..+ + ..+.|.+.++ .+.+|.||+|+|.+.+
T Consensus 215 ~~~~~~~l~~~l~~~G----v~i~~~~~v~~i~~~--~-~~~~v~~~~~-~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 215 DPAIGEAVTAAFRAEG----IEVLEHTQASQVAHM--D-GEFVLTTTHG-ELRADKLLVATGRTPN 272 (467)
T ss_dssp CHHHHHHHHHHHHHTT----CEEETTCCEEEEEEE--T-TEEEEEETTE-EEEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHhCC----CEEEcCCEEEEEEEe--C-CEEEEEECCc-EEEcCEEEECCCCCcC
Confidence 3467777777777766 799999999999864 3 3456776654 4567999999998755
No 116
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.58 E-value=3.4e-08 Score=92.59 Aligned_cols=36 Identities=36% Similarity=0.508 Sum_probs=32.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPC 117 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~ 117 (495)
.+||+|||||++||++|+.|+ ++|++|+||||+...
T Consensus 2 t~dV~IIGaGpaGL~aA~~La-~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALT-AAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHH-HCCCCEEEEECCCCC
Confidence 589999999999999999998 599999999997543
No 117
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.58 E-value=4e-07 Score=91.40 Aligned_cols=65 Identities=9% Similarity=0.150 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH-HHHHH
Q 011027 236 AMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG-SLMHD 306 (495)
Q Consensus 236 p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~-~l~~~ 306 (495)
+..+.+.+.+.+++.| ++++++++|+++..+ ++++..|.+.+|+.+.+|.||+|+|...+ .++..
T Consensus 193 ~~~~~~~l~~~l~~~G----V~i~~~~~v~~i~~~--~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~ 258 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHG----VDLRTGAAMDCIEGD--GTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALIS 258 (415)
T ss_dssp CHHHHHHHHHHHHHTT----CEEEETCCEEEEEES--SSBEEEEEESSSCEEECSEEEECSCCEESCHHHHH
T ss_pred CHHHHHHHHHHHHhCC----CEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHh
Confidence 4567777777777766 799999999999875 56777899999987888999999998665 35444
No 118
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.57 E-value=1.5e-06 Score=83.70 Aligned_cols=35 Identities=20% Similarity=0.306 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
.+||+|||||++|+++|+.|+ +.|++|+|||+..+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~-~~g~~v~lie~~~~ 39 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAA-RANLQPVLITGMEK 39 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-TTTCCCEEECCSST
T ss_pred cCCEEEECcCHHHHHHHHHHH-HCCCcEEEEccCCC
Confidence 579999999999999999998 58999999998643
No 119
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.57 E-value=7.1e-07 Score=89.18 Aligned_cols=65 Identities=14% Similarity=0.112 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH-HHHHH
Q 011027 236 AMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG-SLMHD 306 (495)
Q Consensus 236 p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~-~l~~~ 306 (495)
+..+.+.+.+.+++.| ++++++++|+++..+ ++++..|.+.+|+.+.+|.||+|+|...+ .++..
T Consensus 183 ~~~~~~~l~~~l~~~G----V~i~~~~~v~~i~~~--~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~ 248 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAG----IRMHYGVRATEIAAE--GDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAA 248 (404)
T ss_dssp CHHHHHHHHHHHHHTT----CEEECSCCEEEEEEE--TTEEEEEEETTSCEEECSEEEECCCEEECCHHHHH
T ss_pred CHHHHHHHHHHHHhCC----cEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHh
Confidence 4567777777777766 799999999999876 56777899999987888999999998665 35554
No 120
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.55 E-value=4.2e-07 Score=87.30 Aligned_cols=35 Identities=31% Similarity=0.342 Sum_probs=32.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
.+||+|||||.+|+++|+.|+ ++|++|+|||+...
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la-~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLG-RSSLKPVMYEGFMA 38 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHH-HTTCCCEEECCSSG
T ss_pred CCcEEEECCCHHHHHHHHHHH-HCCCCEEEEecCCC
Confidence 589999999999999999998 59999999999743
No 121
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.54 E-value=2.4e-06 Score=86.66 Aligned_cols=58 Identities=5% Similarity=-0.045 Sum_probs=43.7
Q ss_pred HHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 238 LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 238 ~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
.+.+.+.+.+++.| ++++++++|+++..+ +++.+.|.+.+|+.+.+|.||+|+|...+
T Consensus 209 ~~~~~l~~~l~~~G----v~i~~~~~v~~i~~~--~~~~~~v~~~~g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 209 MISETLVEVMNAEG----PQLHTNAIPKAVVKN--TDGSLTLELEDGRSETVDCLIWAIGREPA 266 (450)
T ss_dssp HHHHHHHHHHHHHS----CEEECSCCEEEEEEC--TTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHCC----CEEEeCCEEEEEEEe--CCcEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 46666777777765 799999999999864 22335677788876778999999998654
No 122
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.53 E-value=2.8e-07 Score=89.12 Aligned_cols=34 Identities=38% Similarity=0.536 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+||+|||||++|+++|+.|+ +.|++|+|||++.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~-~~g~~v~lie~~~ 41 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTG-RAQLSTLILEKGM 41 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHH-HcCCcEEEEeCCC
Confidence 589999999999999999998 5899999999973
No 123
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.53 E-value=1.6e-07 Score=91.08 Aligned_cols=58 Identities=17% Similarity=0.095 Sum_probs=41.0
Q ss_pred cHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 235 DAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 235 ~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
++..+...+.+.+++.+ +.++.++ |+++..+ ++ .|.|.+ ++..+.+|.||+|+|.+..
T Consensus 68 ~~~~~~~~l~~~~~~~g----v~~~~~~-v~~i~~~--~~-~~~v~~-~~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 68 LGVELTDKFRKQSERFG----TTIFTET-VTKVDFS--SK-PFKLFT-DSKAILADAVILAIGAVAK 125 (333)
T ss_dssp EHHHHHHHHHHHHHHTT----CEEECCC-CCEEECS--SS-SEEEEC-SSEEEEEEEEEECCCEEEC
T ss_pred CHHHHHHHHHHHHHHCC----CEEEEeE-EEEEEEc--CC-EEEEEE-CCcEEEcCEEEECCCCCcC
Confidence 44566777777666654 6777776 8888764 23 366777 6666778999999998743
No 124
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.52 E-value=2.5e-07 Score=95.87 Aligned_cols=34 Identities=26% Similarity=0.494 Sum_probs=31.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.++|+||||||.+|+.+|..|+ + |++|+|||++.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLs-e-g~~VlvLEaG~ 58 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLS-E-KYKVLVLERGS 58 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHT-T-TSCEEEECSSB
T ss_pred CcccEEEECccHHHHHHHHHHh-c-CCcEEEEecCC
Confidence 3699999999999999999998 5 99999999974
No 125
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.50 E-value=8.3e-07 Score=90.82 Aligned_cols=38 Identities=29% Similarity=0.266 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCC-ccEEEEcCCcCCCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSD-LSVAVVDKVVPCSG 119 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G-~~V~liE~~~~~~g 119 (495)
.+||+|||||++|+++|++|++ +| .+|+|+|++...+|
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~-~g~~~v~v~E~~~~~GG 47 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTE-LGYKNWHLYECNDTPGG 47 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHH-TTCCSEEEEESSSSSSG
T ss_pred CCCEEEECcCHHHHHHHHHHHH-cCCCCEEEEeCCCCCCC
Confidence 5899999999999999999984 77 79999999854333
No 126
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.49 E-value=4.2e-07 Score=88.32 Aligned_cols=35 Identities=31% Similarity=0.358 Sum_probs=31.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+||+|||||++|+++|+.|+ +.|++|+|||+..
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~-~~g~~v~lie~~~ 47 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAA-RAQLAPLVFEGTS 47 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHH-HTTCCCEEECCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHH-hCCCeEEEEecCC
Confidence 3689999999999999999998 5899999999753
No 127
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.47 E-value=3.2e-07 Score=93.89 Aligned_cols=35 Identities=31% Similarity=0.396 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
.+||+|||||++|+++|+.|+ +.|++|+|||++..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~-~~G~~V~liE~~~~ 39 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAA-QLGFNTACVEKRGK 39 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HTTCCEEEEESSSS
T ss_pred cCCEEEECCCHHHHHHHHHHH-HCCCeEEEEecCCC
Confidence 589999999999999999998 48999999999643
No 128
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.46 E-value=5.5e-07 Score=93.72 Aligned_cols=34 Identities=29% Similarity=0.431 Sum_probs=31.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+|+||||||.+|+++|+.|++ .|++|+|||++.
T Consensus 7 ~~D~iIvG~G~aG~~~A~~L~~-~g~~VlvlE~g~ 40 (546)
T 1kdg_A 7 PYDYIIVGAGPGGIIAADRLSE-AGKKVLLLERGG 40 (546)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSC
T ss_pred ceeEEEECcCHHHHHHHHHHHh-CCCeEEEEeCCC
Confidence 6899999999999999999995 899999999974
No 129
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.45 E-value=8.9e-08 Score=102.49 Aligned_cols=39 Identities=28% Similarity=0.354 Sum_probs=33.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCC
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSG 119 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~g 119 (495)
..+||+|||||++|+++|+.|+ ++|++|+|||++...+|
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La-~~G~~V~liE~~~~~GG 428 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALG-VRGYDVVLAEAGRDLGG 428 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHH-HHTCEEEEECSSSSSCT
T ss_pred ccceEEEECCCHHHHHHHHHHH-HCCCeEEEEecCCCCCC
Confidence 4689999999999999999998 48999999999754333
No 130
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.45 E-value=9.4e-07 Score=91.30 Aligned_cols=60 Identities=10% Similarity=0.208 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s 300 (495)
..+...+.+.+++.| +.++.+++|+.+..+.+++..|.|.+.+|..+.+|.||+|+|+..
T Consensus 267 ~~l~~~l~~~~~~~g----v~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 267 QKLAGALKAHVSDYD----VDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp HHHHHHHHHHHHTSC----EEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcC----CEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 345556666666554 788889999999753222335778888887677899999999864
No 131
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.43 E-value=1.3e-06 Score=89.23 Aligned_cols=35 Identities=37% Similarity=0.465 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
++||+|||||++|+++|+.|+ +.|++|+|||++..
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la-~~G~~V~liEk~~~ 37 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSA-QLGLKTALIEKYKG 37 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHH-HHTCCEEEEECCBC
T ss_pred cCCEEEECcCHHHHHHHHHHH-hCCCEEEEEeCCCc
Confidence 689999999999999999998 48999999999853
No 132
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.43 E-value=8.2e-07 Score=90.40 Aligned_cols=35 Identities=29% Similarity=0.322 Sum_probs=31.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCC-----ccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSD-----LSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G-----~~V~liE~~~~ 116 (495)
.+||+|||||++|+++|+.|+ +.| .+|+|||+...
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~-~~g~~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQ-ERAQAQGALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHH-HHHHHHCCCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHH-hcccccCcccEEEEecCCC
Confidence 579999999999999999998 588 99999999753
No 133
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.42 E-value=4.5e-07 Score=92.85 Aligned_cols=36 Identities=28% Similarity=0.476 Sum_probs=32.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
.++||+|||||.+|+++|+.|+ +.|++|+|||++..
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~-~~G~~V~liE~~~~ 40 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAA-DEGLKVAIVERYKT 40 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH-HTTCCEEEEESSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHH-hCCCeEEEEeCCCC
Confidence 3689999999999999999998 58999999999643
No 134
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.42 E-value=1.2e-06 Score=89.35 Aligned_cols=33 Identities=33% Similarity=0.484 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
++||+|||||++|+++|+.|+ +.|++|+|||++
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~-~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAA-QLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHH-hCCCeEEEEeCC
Confidence 479999999999999999998 589999999997
No 135
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.42 E-value=2.8e-06 Score=87.11 Aligned_cols=59 Identities=8% Similarity=-0.023 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
..+.+.+.+.+++.| ++++++++|+++..+ +++.+.|.+.+|+.+.+|.||+|+|...+
T Consensus 231 ~~~~~~l~~~l~~~G----V~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 231 SELRKQLTEQLRANG----INVRTHENPAKVTKN--ADGTRHVVFESGAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp HHHHHHHHHHHHHTT----EEEEETCCEEEEEEC--TTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCC----CEEEeCCEEEEEEEc--CCCEEEEEECCCcEEEcCEEEEccCCCcC
Confidence 356677777777765 899999999999864 32335677788866678999999998654
No 136
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.41 E-value=1e-06 Score=90.66 Aligned_cols=34 Identities=15% Similarity=0.151 Sum_probs=31.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+|++|||+|++|+++|+.|++ .|++|+|||++.
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~-~~~~v~~~e~~~ 38 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGE-AGVQTLMLEMGQ 38 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHh-CCCcEEEEeCCC
Confidence 6899999999999999999985 999999999974
No 137
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.40 E-value=2.1e-06 Score=88.09 Aligned_cols=36 Identities=33% Similarity=0.457 Sum_probs=31.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
+.+||+|||||++|+++|+.|+ +.|++|+|||++..
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la-~~G~~V~liEk~~~ 59 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAA-QLGMKVAVVEKRST 59 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHH-HTTCCEEEEESSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHH-HCCCeEEEEecCCC
Confidence 3689999999999999999998 59999999998643
No 138
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.40 E-value=6.6e-07 Score=93.65 Aligned_cols=36 Identities=39% Similarity=0.656 Sum_probs=32.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|++|||+|.+|+++|+.|+++.|++|+|||++.
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~ 58 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGF 58 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 368999999999999999999843799999999974
No 139
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.40 E-value=3.5e-06 Score=86.00 Aligned_cols=63 Identities=14% Similarity=0.128 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH-HHHHH
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG-SLMHD 306 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~-~l~~~ 306 (495)
..+.+.+.+.+++.| ++++++++|+++..+ ++++. +.+.+|+.+.+|.||+|+|...+ .++..
T Consensus 202 ~~~~~~l~~~l~~~G----V~i~~~~~v~~i~~~--~~~v~-v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~ 265 (472)
T 3iwa_A 202 KSLSQMLRHDLEKND----VVVHTGEKVVRLEGE--NGKVA-RVITDKRTLDADLVILAAGVSPNTQLARD 265 (472)
T ss_dssp HHHHHHHHHHHHHTT----CEEECSCCEEEEEES--SSBEE-EEEESSCEEECSEEEECSCEEECCHHHHH
T ss_pred HHHHHHHHHHHHhcC----CEEEeCCEEEEEEcc--CCeEE-EEEeCCCEEEcCEEEECCCCCcCHHHHHh
Confidence 456677777777765 799999999999764 44443 66677777778999999998754 45544
No 140
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.37 E-value=9.6e-07 Score=90.83 Aligned_cols=34 Identities=26% Similarity=0.297 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcC---CccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGS---DLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~---G~~V~liE~~~ 115 (495)
.+||+|||||++|+++|+.|++ . |++|+|||++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~-~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAAT-SHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-HCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-CCCCcCEEEEEeCCC
Confidence 4799999999999999999985 6 99999999976
No 141
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.37 E-value=3.9e-06 Score=85.55 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=31.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
.+||+|||||++|+++|+.|+ +.|++|+|||++..
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~-~~g~~V~liE~~~~ 40 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAA-QLGFKTTCIEKRGA 40 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHH-HCCCeEEEEeCCCC
Confidence 589999999999999999998 48999999999743
No 142
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.37 E-value=2.5e-06 Score=88.12 Aligned_cols=35 Identities=37% Similarity=0.491 Sum_probs=32.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+||+|||||.+|+++|+.|+ +.|++|+|||+..
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la-~~G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAA-QYGKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHH-HTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHH-hCCCeEEEEeccC
Confidence 3689999999999999999998 4899999999964
No 143
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.37 E-value=2.2e-06 Score=87.01 Aligned_cols=33 Identities=24% Similarity=0.319 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
++||+|||||.+|+++|..|+ +.|++|+|||++
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~-~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAA-QLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHH-HTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHH-hCCCeEEEEECC
Confidence 589999999999999999998 589999999997
No 144
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.34 E-value=1.8e-06 Score=82.75 Aligned_cols=34 Identities=32% Similarity=0.409 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEE-EcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAV-VDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~l-iE~~~ 115 (495)
.+||+|||||++|+++|+.|+ ++|++|+| +|+..
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~-~~g~~v~li~e~~~ 38 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYAT-RGGLKNVVMFEKGM 38 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHH-HHTCSCEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHH-HCCCCeEEEEeCCC
Confidence 589999999999999999998 58999999 99943
No 145
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.33 E-value=4.3e-06 Score=85.81 Aligned_cols=58 Identities=9% Similarity=-0.016 Sum_probs=43.6
Q ss_pred HHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 238 LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 238 ~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
.+.+.+.+.+++.| ++++++++|+++..+ +++.+.|.+.+|+.+.+|.||+|+|...+
T Consensus 236 ~~~~~l~~~l~~~G----V~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 236 TIREEVTKQLTANG----IEIMTNENPAKVSLN--TDGSKHVTFESGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp HHHHHHHHHHHHTT----CEEEESCCEEEEEEC--TTSCEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHhCC----CEEEeCCEEEEEEEc--CCceEEEEECCCcEEEcCEEEECCCCccc
Confidence 45666666777665 799999999999764 22335677788876778999999998544
No 146
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.31 E-value=3.1e-06 Score=86.21 Aligned_cols=35 Identities=31% Similarity=0.411 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
.+||+|||||++|+++|+.|+ +.|++|+|||+...
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~-~~G~~V~liEk~~~ 38 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLA-KAKYNVLMADPKGE 38 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HTTCCEEEECTTSS
T ss_pred cceEEEECCCHHHHHHHHHHH-hCCCeEEEEECCCC
Confidence 589999999999999999998 59999999997643
No 147
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.31 E-value=3e-06 Score=86.84 Aligned_cols=34 Identities=38% Similarity=0.542 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
++||+|||||.+|+++|+.|+ +.|++|+|||+..
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la-~~G~~V~liEk~~ 39 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAA-QLGKKVAVADYVE 39 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HTTCCEEEECCCC
T ss_pred cCCEEEECCCHHHHHHHHHHH-hCCCeEEEEEecc
Confidence 689999999999999999998 5999999999853
No 148
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.30 E-value=1.8e-06 Score=88.63 Aligned_cols=56 Identities=16% Similarity=0.138 Sum_probs=41.4
Q ss_pred HHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH-HHHHHh
Q 011027 245 KGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG-SLMHDL 307 (495)
Q Consensus 245 ~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~-~l~~~l 307 (495)
+.+++.| +++++++.|+++..+ +++..|.+.+|+.+.+|.||+|+|...+ .|+..+
T Consensus 265 ~~l~~~G----V~v~~~~~v~~i~~~---~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~ 321 (493)
T 1y56_A 265 QELERWG----IDYVHIPNVKRVEGN---EKVERVIDMNNHEYKVDALIFADGRRPDINPITQA 321 (493)
T ss_dssp HHHHHHT----CEEEECSSEEEEECS---SSCCEEEETTCCEEECSEEEECCCEEECCHHHHHT
T ss_pred HHHHhCC----cEEEeCCeeEEEecC---CceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhc
Confidence 4445555 799999999999753 3455677788877778999999998766 366653
No 149
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.29 E-value=2.2e-06 Score=87.36 Aligned_cols=35 Identities=26% Similarity=0.385 Sum_probs=31.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
++||+|||||++|+++|+.|+ +.|++|+|||++..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~-~~g~~V~lie~~~~ 36 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAA-QLGMKTACVEKRGA 36 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHH-HTTCCEEEEESSSS
T ss_pred CCCEEEECCCHHHHHHHHHHH-HCCCeEEEEeCCCC
Confidence 479999999999999999998 58999999999743
No 150
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.28 E-value=4e-06 Score=85.29 Aligned_cols=57 Identities=16% Similarity=0.119 Sum_probs=43.2
Q ss_pred HHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCe-eeecCeEEEccCcchH
Q 011027 238 LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT-LYSKKAIVVAAGCWSG 301 (495)
Q Consensus 238 ~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~-~~~a~~VV~A~G~~s~ 301 (495)
.+.+.+.+.+++.| ++++++++|+++..+ ++. ..|.+.+|+ .+.+|.||+|+|...+
T Consensus 208 ~~~~~l~~~l~~~g----v~i~~~~~v~~i~~~--~~~-~~v~~~~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 208 LLSATLAENMHAQG----IETHLEFAVAALERD--AQG-TTLVAQDGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp HHHHHHHHHHHHTT----CEEESSCCEEEEEEE--TTE-EEEEETTCCEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHCC----CEEEeCCEEEEEEEe--CCe-EEEEEeCCcEEEEcCEEEECCCCCcC
Confidence 45566666666665 799999999999865 333 567778887 6778999999998654
No 151
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.27 E-value=3.1e-06 Score=85.85 Aligned_cols=56 Identities=16% Similarity=0.111 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s 300 (495)
..+.+.+.+.+++.| ++++++++|+++... ++++ .|.+.++ .+.+|.||+|+|...
T Consensus 189 ~~~~~~l~~~l~~~G----V~i~~~~~v~~i~~~--~~~v-~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQA----VIFHFEETVLGIEET--ANGI-VLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHHHHTTT----EEEEETCCEEEEEEC--SSCE-EEEESSC-EEEESEEEECSCCBC
T ss_pred HHHHHHHHHHHHHcC----CEEEeCCEEEEEEcc--CCeE-EEEECCC-EEEeCEEEECcCCCC
Confidence 456777777777765 899999999999864 4455 6777777 556799999999754
No 152
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.25 E-value=1.4e-05 Score=80.38 Aligned_cols=66 Identities=17% Similarity=0.090 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH-HHHHH
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG-SLMHD 306 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~-~l~~~ 306 (495)
..+.+.+.+.+++.| ++++++++|+++....++++++.|.+.+|+.+.+|.||+|+|...+ .++..
T Consensus 191 ~~~~~~l~~~l~~~G----V~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~ 257 (431)
T 1q1r_A 191 PPVSAFYEHLHREAG----VDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASA 257 (431)
T ss_dssp HHHHHHHHHHHHHHT----CEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHH
T ss_pred HHHHHHHHHHHHhCC----eEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhc
Confidence 456666777777766 7999999999997510145677788888887788999999998654 45554
No 153
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.21 E-value=5.3e-06 Score=84.66 Aligned_cols=35 Identities=23% Similarity=0.274 Sum_probs=31.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
.+||+|||||++|+++|+.|+ +.|++|+|||++..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~-~~g~~V~liE~~~~ 40 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAA-QLGFKTVCIEKNET 40 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHH-hCCCeEEEEeCCCC
Confidence 589999999999999999998 48999999999743
No 154
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.21 E-value=7.7e-06 Score=83.66 Aligned_cols=33 Identities=36% Similarity=0.595 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+||+|||||.+|+++|+.|+ +.|++|+|||+.
T Consensus 9 ~~DvvVIGgG~aGl~aA~~la-~~G~~V~liEk~ 41 (483)
T 3dgh_A 9 DYDLIVIGGGSAGLACAKEAV-LNGARVACLDFV 41 (483)
T ss_dssp SEEEEEECCSHHHHHHHHHHH-HTTCCEEEECCC
T ss_pred CCCEEEECcCHHHHHHHHHHH-HCCCEEEEEEec
Confidence 689999999999999999998 599999999964
No 155
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.20 E-value=5.5e-06 Score=82.85 Aligned_cols=63 Identities=13% Similarity=0.120 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH-HHHHH
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG-SLMHD 306 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~-~l~~~ 306 (495)
..+.+.+.+.+++.| ++++++++|+++..+ +++..|.+.+|+.+.+|.||+|+|...+ .++..
T Consensus 185 ~~~~~~l~~~l~~~G----V~i~~~~~v~~i~~~---~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~ 248 (410)
T 3ef6_A 185 RRIGAWLRGLLTELG----VQVELGTGVVGFSGE---GQLEQVMASDGRSFVADSALICVGAEPADQLARQ 248 (410)
T ss_dssp HHHHHHHHHHHHHHT----CEEECSCCEEEEECS---SSCCEEEETTSCEEECSEEEECSCEEECCHHHHH
T ss_pred HHHHHHHHHHHHHCC----CEEEeCCEEEEEecc---CcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHh
Confidence 456677777777766 799999999998753 3556788888888888999999998765 45554
No 156
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.19 E-value=5.6e-06 Score=84.60 Aligned_cols=34 Identities=24% Similarity=0.406 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
++||+|||||.+|+++|+.|+ +.|++|+|||++.
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~-~~g~~V~liE~~~ 44 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAA-SYGAKTLLVEAKA 44 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HTSCCEEEEESSC
T ss_pred cCCEEEEcCCHHHHHHHHHHH-HCCCcEEEEeCCC
Confidence 589999999999999999998 4899999999974
No 157
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.18 E-value=1.2e-06 Score=84.75 Aligned_cols=39 Identities=38% Similarity=0.568 Sum_probs=33.5
Q ss_pred cccEEEECCCHHHHHHHHHHHh-cCCccEEEEcCCcCCCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLV-GSDLSVAVVDKVVPCSG 119 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~-~~G~~V~liE~~~~~~g 119 (495)
++||+|||||++|+++|++|++ +.|++|+|||++...+|
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG 104 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCc
Confidence 5899999999999999999985 46999999999754333
No 158
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.18 E-value=7.6e-06 Score=83.02 Aligned_cols=33 Identities=33% Similarity=0.484 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
+||+|||||.+|+++|+.|+ +.|++|+|||++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~-~~g~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAA-QLGMKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHH-HTTCCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHH-HCCCeEEEEeCCC
Confidence 78999999999999999998 5899999999974
No 159
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.16 E-value=9e-06 Score=82.68 Aligned_cols=34 Identities=32% Similarity=0.397 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+||+|||||.+|+++|..|+ +.|++|+|||++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~-~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAA-QLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHH-HCCCeEEEEeCCC
Confidence 489999999999999999998 5899999999975
No 160
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.14 E-value=4.2e-06 Score=80.31 Aligned_cols=36 Identities=33% Similarity=0.579 Sum_probs=32.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
.+|||+|||||.+|+++|+.|+ +.|++|+|||++.+
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~-~~g~~V~liE~~~~ 40 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYAS-RANLKTVMIERGIP 40 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHH-HTTCCEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHH-HCCCCEEEEecCCC
Confidence 3699999999999999999998 59999999999754
No 161
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.12 E-value=3.4e-06 Score=85.12 Aligned_cols=35 Identities=29% Similarity=0.423 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHh--cCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLV--GSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~--~~G~~V~liE~~~ 115 (495)
..||+|||||++|+++|+.|++ ..|.+|+|||++.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 3689999999999999999973 1799999999964
No 162
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.12 E-value=2.4e-05 Score=80.75 Aligned_cols=55 Identities=11% Similarity=-0.148 Sum_probs=40.7
Q ss_pred HHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcc
Q 011027 238 LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCW 299 (495)
Q Consensus 238 ~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~ 299 (495)
.+.+.+.+..++.| +.+++++.|.++... ++ ...|.+.++....+|.|++|+|.-
T Consensus 264 ei~~~l~~~l~~~g----i~~~~~~~v~~~~~~--~~-~~~v~~~~~~~~~~D~vLvAvGR~ 318 (542)
T 4b1b_A 264 QCAVKVKLYMEEQG----VMFKNGILPKKLTKM--DD-KILVEFSDKTSELYDTVLYAIGRK 318 (542)
T ss_dssp HHHHHHHHHHHHTT----CEEEETCCEEEEEEE--TT-EEEEEETTSCEEEESEEEECSCEE
T ss_pred hHHHHHHHHHHhhc----ceeecceEEEEEEec--CC-eEEEEEcCCCeEEEEEEEEccccc
Confidence 45666666777765 789999999999876 34 345666666555579999999974
No 163
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.08 E-value=2.4e-06 Score=84.63 Aligned_cols=34 Identities=24% Similarity=0.479 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
+.+|+|||||++|+++|..|. ..+.+|+|||++.
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~-~~~~~itlie~~~ 42 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAAL-GKCDDITMINSEK 42 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHT-TTCSCEEEECSSS
T ss_pred CCCEEEEcCcHHHHHHHHHHh-CCCCEEEEEECCC
Confidence 567999999999999999995 6899999999974
No 164
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.06 E-value=3.2e-06 Score=86.62 Aligned_cols=39 Identities=26% Similarity=0.414 Sum_probs=34.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGA 120 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~ga 120 (495)
..||+|||||++|+++|+.|+ +.|++|+|+|++...+|.
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~-~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQ-KAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSSSSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHH-HCCCCEEEEeccCCCCCc
Confidence 579999999999999999997 599999999998655554
No 165
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.06 E-value=2.9e-06 Score=84.58 Aligned_cols=39 Identities=33% Similarity=0.641 Sum_probs=33.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcC-CccEEEEcCCcCCCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGS-DLSVAVVDKVVPCSGA 120 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~-G~~V~liE~~~~~~ga 120 (495)
.+||+|||||++|+++|+.|++ . |++|+|+|+++..+|.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~-~~g~~v~v~E~~~~~GG~ 46 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVAT-QLDKRVLVLERRPHIGGN 46 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHH-HSCCCEEEECSSSSSSGG
T ss_pred cCCEEEECCCHHHHHHHHHHHH-hCCCCEEEEeCCCCCCCe
Confidence 5899999999999999999984 6 9999999998654443
No 166
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.04 E-value=3.1e-06 Score=87.46 Aligned_cols=39 Identities=33% Similarity=0.567 Sum_probs=33.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGA 120 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~ga 120 (495)
.+||+|||||++|+++|+.|+ +.|++|+|+|+++..+|.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~-~~G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLH-DSGLNVVVLEARDRVGGR 42 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHH-HTTCCEEEECSSSSSBTT
T ss_pred CceEEEECCCHHHHHHHHHHH-HCCCCEEEEeCCCCCCCc
Confidence 579999999999999999998 589999999998654443
No 167
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.02 E-value=1.5e-05 Score=80.80 Aligned_cols=35 Identities=26% Similarity=0.377 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhc-CCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVG-SDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~-~G~~V~liE~~~ 115 (495)
.+||+|||||++|+++|+.|++. .|.+|+|||++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 47899999999999999999742 289999999974
No 168
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.02 E-value=9.2e-07 Score=82.04 Aligned_cols=41 Identities=24% Similarity=0.269 Sum_probs=37.7
Q ss_pred eeceeecccccccccccccccceee-eecCCCCCcccc-cccc
Q 011027 15 LQESVNVWGSRGRRQSCRTSAAFAF-KSSFFGKKPLSL-SVNK 55 (495)
Q Consensus 15 ~~~~~~~~~~~~~~~~~l~~~gf~~-k~~g~g~kr~~l-~~~~ 55 (495)
-+..++|||+++.|||+|+++||.| |+||||+||+|+ +...
T Consensus 205 pGG~l~tysaa~~vrr~L~~aGF~v~~~~g~~~kr~m~~a~~~ 247 (257)
T 2qy6_A 205 PGGTLATFTSAGFVRRGLQEAGFTMQKRKGFGRKREMLCGVME 247 (257)
T ss_dssp EEEEEEESCCBHHHHHHHHHHTEEEEEECCSTTCCCEEEEEEC
T ss_pred CCcEEEEEeCCHHHHHHHHHCCCEEEeCCCCCCCCceEEEEec
Confidence 4678899999999999999999999 999999999999 7653
No 169
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.01 E-value=4.2e-06 Score=82.05 Aligned_cols=38 Identities=26% Similarity=0.449 Sum_probs=33.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC-cCCCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV-VPCSG 119 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~-~~~~g 119 (495)
..||+|||||++|+++|+.|+ +.|++|+|+|++ ...+|
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~-~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLT-RAGHDVTILEANANRVGG 82 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHH-HTSCEEEEECSCSSCCBT
T ss_pred CceEEEECCCHHHHHHHHHHH-HCCCcEEEEeccccccCC
Confidence 579999999999999999997 589999999998 55444
No 170
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.01 E-value=4.9e-06 Score=83.55 Aligned_cols=38 Identities=24% Similarity=0.350 Sum_probs=33.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCC-ccEEEEcCCcCCCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSD-LSVAVVDKVVPCSG 119 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G-~~V~liE~~~~~~g 119 (495)
.+||+|||||++|+++|+.|+ ++| .+|+|+|+++..+|
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~-~~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLE-QAGFHDYTILERTDHVGG 44 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHH-HTTCCCEEEECSSSCSST
T ss_pred CCCEEEECcCHHHHHHHHHHH-hCCCCcEEEEECCCCCCC
Confidence 579999999999999999998 589 99999999754333
No 171
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.97 E-value=5.9e-06 Score=81.69 Aligned_cols=40 Identities=35% Similarity=0.567 Sum_probs=34.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCc
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGA 120 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~ga 120 (495)
..+||+|||||++|+++|++|+ +.|.+|+|+|++...+|.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~-~~g~~v~v~E~~~~~GG~ 67 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLA-SSGQRVLIVDRRPHIGGN 67 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSSSSGG
T ss_pred CCCCEEEECccHHHHHHHHHHH-HCCCceEEEeccCCCCCc
Confidence 3689999999999999999998 489999999997543343
No 172
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.97 E-value=3.7e-06 Score=86.83 Aligned_cols=39 Identities=36% Similarity=0.441 Sum_probs=34.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCC-ccEEEEcCCcCCCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSD-LSVAVVDKVVPCSGA 120 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G-~~V~liE~~~~~~ga 120 (495)
..||+|||||++||++|+.|+ +.| ++|+|+|+++..+|.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~-~~G~~~V~VlEa~~riGGr 47 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLH-QNGIQDCLVLEARDRVGGR 47 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHH-HTTCCSEEEECSSSSSBTT
T ss_pred CCcEEEECCCHHHHHHHHHHH-hcCCCCEEEEeCCCCCCCc
Confidence 579999999999999999997 599 999999998654443
No 173
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.95 E-value=6e-05 Score=78.64 Aligned_cols=65 Identities=12% Similarity=0.123 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEec-----------------CCCcEEEEEcCCCeeeecCeEEEccCcc
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSN-----------------STGEVEAVQTSKNTLYSKKAIVVAAGCW 299 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~-----------------~~~~~~~v~~~~g~~~~a~~VV~A~G~~ 299 (495)
..+...+.+.+++.| +++++++.|+++..+. ++++ ..+...+|+.+.+|.||+|+|..
T Consensus 192 ~~~~~~l~~~l~~~G----V~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 192 REMAGFAHQAIRDQG----VDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGH-LSLTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHHHHHHHHTT----CEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCE-EEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCC----CEEEeCCeEEEEeccccccccccccccccccccCCCc-EEEEEcCCCEEEcCEEEECcCCc
Confidence 456666666666665 7999999999997630 1333 34566777777789999999986
Q ss_pred hH-HHHHH
Q 011027 300 SG-SLMHD 306 (495)
Q Consensus 300 s~-~l~~~ 306 (495)
.+ .++..
T Consensus 267 p~~~l~~~ 274 (565)
T 3ntd_A 267 PETQLARD 274 (565)
T ss_dssp ECCHHHHH
T ss_pred cchHHHHh
Confidence 54 45444
No 174
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.92 E-value=6.1e-06 Score=81.17 Aligned_cols=38 Identities=32% Similarity=0.531 Sum_probs=32.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSGA 120 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~ga 120 (495)
+||+|||||++|+++|+.|+ +.|++|+|+|++...+|.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~-~~g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELK-KLNKKVLVIEKRNHIGGN 39 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHG-GGTCCEEEECSSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHH-hCCCcEEEEecCCCCCcc
Confidence 68999999999999999998 589999999997543443
No 175
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.92 E-value=7.3e-06 Score=84.28 Aligned_cols=38 Identities=34% Similarity=0.438 Sum_probs=33.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSG 119 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~g 119 (495)
.+||+|||||++|+++|+.|+ ++|++|+|+|++...+|
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~-~~g~~v~v~E~~~~~GG 50 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLK-IHGLNVTVFEAEGKAGG 50 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSCEEEEECSSSSSCS
T ss_pred CCeEEEECCCHHHHHHHHHHH-HCCCcEEEEEeCCCCCC
Confidence 589999999999999999998 58999999999865444
No 176
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.90 E-value=5.7e-06 Score=83.29 Aligned_cols=35 Identities=29% Similarity=0.331 Sum_probs=31.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
+..||+|||||++|+++|+.|+ ++|++|+|||++.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La-~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLR-QHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHH-HTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHH-HCCCeEEEEcCCC
Confidence 3579999999999999999998 5999999999975
No 177
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.86 E-value=6.8e-06 Score=84.20 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCC---ccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSD---LSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G---~~V~liE~~~ 115 (495)
.+||+|||||.+|+++|..|++ .| .+|+|||++.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~-~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLT-NYGDANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HHGGGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHh-cCCCCCeEEEEECCC
Confidence 5899999999999999999984 66 9999999974
No 178
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.83 E-value=0.0001 Score=72.89 Aligned_cols=48 Identities=13% Similarity=0.050 Sum_probs=36.9
Q ss_pred eeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHH-HHHH
Q 011027 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGS-LMHD 306 (495)
Q Consensus 256 ~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~-l~~~ 306 (495)
++++++++|+++..+ ++ .+.|.+.+|+.+.+|.||+|+|...+. ++..
T Consensus 202 v~i~~~~~v~~i~~~--~~-~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~ 250 (384)
T 2v3a_A 202 VRFHLGPVLASLKKA--GE-GLEAHLSDGEVIPCDLVVSAVGLRPRTELAFA 250 (384)
T ss_dssp CEEEESCCEEEEEEE--TT-EEEEEETTSCEEEESEEEECSCEEECCHHHHH
T ss_pred CEEEeCCEEEEEEec--CC-EEEEEECCCCEEECCEEEECcCCCcCHHHHHH
Confidence 688899999999865 33 456777888777789999999987653 5554
No 179
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.80 E-value=1.6e-05 Score=78.68 Aligned_cols=38 Identities=32% Similarity=0.520 Sum_probs=33.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSG 119 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~g 119 (495)
++||+|||||++|+++|+.|+ +.|++|+|+|++...+|
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~-~~g~~v~v~E~~~~~GG 40 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLA-EKGHQVHIIDQRDHIGG 40 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTTCEEEEEESSSSSSG
T ss_pred cCCEEEECcCHHHHHHHHHHH-HCCCcEEEEEecCCcCC
Confidence 478999999999999999998 58999999999754443
No 180
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.76 E-value=1.5e-05 Score=81.32 Aligned_cols=36 Identities=31% Similarity=0.410 Sum_probs=32.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
..+||+|||||++|+++|+.|+ +.|++|+|||++..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la-~~G~~V~liE~~~~ 54 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAA-ELGARAAVVESHKL 54 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHH-HTTCCEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHH-hCCCeEEEEecCCC
Confidence 4689999999999999999998 58999999998754
No 181
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.74 E-value=1.5e-05 Score=78.88 Aligned_cols=34 Identities=32% Similarity=0.504 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhcC--CccEEEEcCCcC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGS--DLSVAVVDKVVP 116 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~--G~~V~liE~~~~ 116 (495)
.||+|||||++|+++|+.|++ . |++|+|||+...
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~-~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQ-ARPLWAIDIVEKNDE 36 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HCTTSEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHh-cCCCCCEEEEECCCC
Confidence 379999999999999999985 6 999999999743
No 182
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.72 E-value=1.8e-05 Score=81.21 Aligned_cols=38 Identities=34% Similarity=0.518 Sum_probs=33.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSG 119 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~g 119 (495)
..||+|||||++|+++|+.|+ +.|.+|+|+|++...+|
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~-~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLA-GAGHQVTVLEASERPGG 70 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHH-HHTCEEEEECSSSSSBT
T ss_pred CCCEEEECCCHHHHHHHHHHH-hCCCeEEEEECCCCCCC
Confidence 579999999999999999998 58999999999754333
No 183
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.72 E-value=2.1e-05 Score=82.81 Aligned_cols=39 Identities=44% Similarity=0.635 Sum_probs=34.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCC
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSG 119 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~g 119 (495)
..+||+|||||++|+++|+.|+ ++|++|+|||++....|
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~-~~G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELV-GAGYKVAMFDIGEIDSG 83 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSCCCSS
T ss_pred ccCCEEEECCcHHHHHHHHHHH-hCCCcEEEEeccCCCCC
Confidence 3689999999999999999998 59999999999866444
No 184
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.67 E-value=0.00017 Score=71.61 Aligned_cols=48 Identities=10% Similarity=0.060 Sum_probs=37.2
Q ss_pred eeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHH
Q 011027 256 YAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHD 306 (495)
Q Consensus 256 ~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~ 306 (495)
++++.++.+..+..+. +. ..+.+.+|+.+.+|.||+|+|.-...++..
T Consensus 217 i~v~~~~~v~~v~~~~-~~--~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~ 264 (401)
T 3vrd_B 217 IEWHPGPDAAVVKTDT-EA--MTVETSFGETFKAAVINLIPPQRAGKIAQS 264 (401)
T ss_dssp EEEECTTTTCEEEEET-TT--TEEEETTSCEEECSEEEECCCEEECHHHHH
T ss_pred cEEEeCceEEEEEecc-cc--eEEEcCCCcEEEeeEEEEecCcCCchhHhh
Confidence 7889999999887652 22 357788888888899999999877666554
No 185
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.61 E-value=5.9e-05 Score=76.27 Aligned_cols=36 Identities=33% Similarity=0.406 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPC 117 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~ 117 (495)
.+||+|||||++|+++|+.|+ +.|++|+|||+....
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~-~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELR-AKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHH-HHTCCEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHH-HCCCeEEEEeccCCC
Confidence 579999999999999999998 489999999997543
No 186
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.59 E-value=4.3e-05 Score=78.27 Aligned_cols=35 Identities=26% Similarity=0.319 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
.+||+|||||.+|+++|+.|+ +.|++|+|||++..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la-~~G~~V~liE~~~~ 42 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAK-KHTDKVVLIEGGAY 42 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-TTCSCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHH-hCCCcEEEEeCCCC
Confidence 589999999999999999998 59999999999753
No 187
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.58 E-value=4.6e-05 Score=73.95 Aligned_cols=33 Identities=27% Similarity=0.345 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
+||+|||||.+|+.+|+.|+ ++|.+|+|+|++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la-~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLL-RLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHH-HCCCcEEEEeccC
Confidence 58999999999999999998 5999999999864
No 188
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.57 E-value=0.00022 Score=73.05 Aligned_cols=57 Identities=16% Similarity=0.217 Sum_probs=39.7
Q ss_pred HHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCC-----cEEEEEcCCC-----eeeecCeEEEccCc
Q 011027 238 LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTG-----EVEAVQTSKN-----TLYSKKAIVVAAGC 298 (495)
Q Consensus 238 ~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~-----~~~~v~~~~g-----~~~~a~~VV~A~G~ 298 (495)
.+..+|...+++.+ ..++++++|+++...+.++ +.|.|++.++ ..+.+++||+|+|.
T Consensus 146 E~~~Yl~~~A~~~~----~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 146 EFEDYMRWCAQQFS----DVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHTTG----GGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcC----CceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 45666666666654 3678999999998763222 3688887543 34567999999995
No 189
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.55 E-value=5.8e-05 Score=76.84 Aligned_cols=60 Identities=22% Similarity=0.196 Sum_probs=42.1
Q ss_pred HHHHHHHHHhhhh-ccCC---ceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch
Q 011027 238 LAVAYIEKGNRHF-ASKG---RYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 238 ~~~~~l~~~~~~~-g~~~---~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s 300 (495)
.+++.|.+.+.+. +..+ +++++++++|++|..+ +++ +.|++.+|+.+.+|+||+|++.+.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad~vI~a~~~~~ 270 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS--PGG-VTVKTEDNSVYSADYVMVSASLGV 270 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC--SSC-EEEEETTSCEEEESEEEECSCHHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEc--CCc-EEEEECCCCEEEcCEEEEecCHHH
Confidence 6677776655432 0000 1378999999999875 344 558888887677899999999754
No 190
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.52 E-value=6.2e-05 Score=77.22 Aligned_cols=59 Identities=7% Similarity=0.044 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCee-eecCeEEEccCcchH
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTL-YSKKAIVVAAGCWSG 301 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~-~~a~~VV~A~G~~s~ 301 (495)
..+.+.+.+.+++.| ++++++++|+++..+ +++...|.+.+|+. +.+|.||+|+|...+
T Consensus 217 ~~~~~~l~~~l~~~g----v~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 217 ESVINVLENDMKKNN----INIVTFADVVEIKKV--SDKNLSIHLSDGRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp HHHHHHHHHHHHHTT----CEEECSCCEEEEEES--STTCEEEEETTSCEEEEESEEEECCCBCCT
T ss_pred hhhHHHHHHHHHhCC----CEEEECCEEEEEEEc--CCceEEEEECCCcEEEECCEEEECCCCCcC
Confidence 345666667777665 799999999999764 22234677778875 678999999997654
No 191
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.49 E-value=0.00057 Score=68.92 Aligned_cols=34 Identities=29% Similarity=0.514 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+.+|..|+ +.|.+|+|+|+..
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~-~~g~~Vtlv~~~~ 182 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFA-KAGKKVTVIDILD 182 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-HCCCeEEEEecCc
Confidence 478999999999999999997 5999999999864
No 192
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.48 E-value=0.00053 Score=69.52 Aligned_cols=34 Identities=18% Similarity=0.404 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~-~~g~~Vtlv~~~~ 202 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYR-RLGAEVTLIEYMP 202 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHH-HCCCeEEEEEcCC
Confidence 367999999999999999997 5999999999863
No 193
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.47 E-value=0.00064 Score=68.71 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+.+|..|+ +.|.+|+|+|+..
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~-~~g~~V~lv~~~~ 200 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWH-RLGAEVIVLEYMD 200 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-HcCCEEEEEecCC
Confidence 357999999999999999997 5999999999863
No 194
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.44 E-value=0.00011 Score=79.47 Aligned_cols=37 Identities=38% Similarity=0.513 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCS 118 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~ 118 (495)
..+|+|||||++|+++|+.|+ ++|++|+|+|+....+
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~-~~g~~v~v~E~~~~~G 314 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQ-SFGMDVTLLEARDRVG 314 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHH-HCCCcEEEEEecCcCC
Confidence 579999999999999999998 5999999999975433
No 195
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.44 E-value=9.6e-05 Score=78.50 Aligned_cols=36 Identities=39% Similarity=0.524 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPC 117 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~ 117 (495)
..||+|||||++|+++|+.|+ ++|++|+|+|+....
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~-~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQ-SFGMDVTLLEARDRV 142 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHH-HTTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHH-HCCCeEEEEecCCCC
Confidence 579999999999999999998 599999999997543
No 196
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.41 E-value=8.9e-05 Score=75.17 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+||+|||||.+|+++|..|+ +.|++|+|||++.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~-~~g~~V~lie~~~ 38 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAG-QLGIPTVLVEGQA 38 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHH-HHTCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHH-HCCCEEEEEccCC
Confidence 589999999999999999998 4899999999953
No 197
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.41 E-value=9.8e-05 Score=74.18 Aligned_cols=35 Identities=26% Similarity=0.425 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhc-CCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVG-SDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~-~G~~V~liE~~~ 115 (495)
..||+|||||++|+++|+.|++. .|++|+|||++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~ 37 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 36899999999999999999731 789999999974
No 198
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.38 E-value=0.00017 Score=77.54 Aligned_cols=36 Identities=33% Similarity=0.421 Sum_probs=32.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPC 117 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~ 117 (495)
.+||+|||||++|+++|+.|+ ++|++|+|||+....
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~-~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLM-ESGYTVHLTDTAEKI 424 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSSST
T ss_pred CceEEEECCCHHHHHHHHHHH-HCCCeEEEEeCCCCc
Confidence 579999999999999999998 599999999997543
No 199
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.31 E-value=0.00012 Score=73.02 Aligned_cols=59 Identities=2% Similarity=-0.058 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchHHHHHH
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSGSLMHD 306 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~~l~~~ 306 (495)
..+.+.+.+.+++.| |+++++++|+++.. + .|.+.+|+.+.+|.||+|+|.....++..
T Consensus 218 ~~~~~~~~~~l~~~g----V~~~~~~~v~~i~~----~---~v~~~~g~~~~~D~vi~a~G~~~~~~l~~ 276 (409)
T 3h8l_A 218 PNSRKAVASIYNQLG----IKLVHNFKIKEIRE----H---EIVDEKGNTIPADITILLPPYTGNPALKN 276 (409)
T ss_dssp HHHHHHHHHHHHHHT----CEEECSCCEEEECS----S---EEEETTSCEEECSEEEEECCEECCHHHHT
T ss_pred HHHHHHHHHHHHHCC----CEEEcCCceEEECC----C---eEEECCCCEEeeeEEEECCCCCccHHHHh
Confidence 456777777777765 79999999999853 2 26677887778899999999877665553
No 200
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.30 E-value=0.0013 Score=66.85 Aligned_cols=34 Identities=32% Similarity=0.384 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~-~~g~~Vtlv~~~~ 216 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYS-RLGSKVTVVEFQP 216 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHH-HcCCEEEEEEeCC
Confidence 367999999999999999998 5999999999863
No 201
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.29 E-value=0.00019 Score=70.86 Aligned_cols=34 Identities=24% Similarity=0.403 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCC--ccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSD--LSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G--~~V~liE~~~ 115 (495)
.+||+|||||++|+++|+.|+ +.| .+|+|+|++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~-~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWR-KLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHH-TTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHH-hhCCCCCEEEEECCC
Confidence 589999999999999999997 588 5699999863
No 202
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.27 E-value=0.00019 Score=73.66 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=32.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|++|||+|.+|+++|+.|++ .|++|+|||++.
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~-~~~~v~~~e~~~ 44 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQ-AGIPTQIVEMGR 44 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCcEEEEECCC
Confidence 46999999999999999999985 999999999973
No 203
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.26 E-value=0.00025 Score=75.43 Aligned_cols=36 Identities=22% Similarity=0.309 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPC 117 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~ 117 (495)
.+||+|||||.+|+++|+.|+ ++|++|+|||++...
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~-~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAA-ARGHQVTLFDAHSEI 408 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-hCCCeEEEEeCCCCC
Confidence 589999999999999999998 599999999997543
No 204
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.25 E-value=0.0041 Score=64.17 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|.+|+-+|..|+ +.|.+|+|+++..
T Consensus 178 ~krV~VIG~G~sgve~a~~l~-~~~~~Vtv~~r~~ 211 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLA-PEVEHLTVFVRTP 211 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHT-TTCSEEEEEESSC
T ss_pred cceEEEECCCchHHHHHHHHH-hhCCEEEEEECCC
Confidence 467999999999999999997 5899999999863
No 205
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.23 E-value=0.00015 Score=74.09 Aligned_cols=64 Identities=14% Similarity=0.073 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH-HHHHH
Q 011027 236 AMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG-SLMHD 306 (495)
Q Consensus 236 p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~-~l~~~ 306 (495)
|..+.+.+.+.+++.| ++++++++|+++..+ ++. ..|.+.+|+.+.+|.||+|+|...+ .++..
T Consensus 225 ~~~~~~~~~~~l~~~G----V~v~~~~~V~~i~~~--~~~-~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~ 289 (493)
T 1m6i_A 225 PEYLSNWTMEKVRREG----VKVMPNAIVQSVGVS--SGK-LLIKLKDGRKVETDHIVAAVGLEPNVELAKT 289 (493)
T ss_dssp CHHHHHHHHHHHHTTT----CEEECSCCEEEEEEE--TTE-EEEEETTSCEEEESEEEECCCEEECCTTHHH
T ss_pred CHHHHHHHHHHHHhcC----CEEEeCCEEEEEEec--CCe-EEEEECCCCEEECCEEEECCCCCccHHHHHH
Confidence 4566777777777765 799999999999764 333 4677888877778999999998755 35544
No 206
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.18 E-value=0.0002 Score=75.05 Aligned_cols=61 Identities=16% Similarity=0.263 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH-HHHHH
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG-SLMHD 306 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~-~l~~~ 306 (495)
..+.+.+.+.+++.| ++++++++|+++..+ ++ .|.+.+|+.+.+|.||+|+|...+ .++..
T Consensus 228 ~~~~~~l~~~l~~~G----V~i~~~~~v~~i~~~--~~---~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~ 289 (588)
T 3ics_A 228 YEMAAYVHEHMKNHD----VELVFEDGVDALEEN--GA---VVRLKSGSVIQTDMLILAIGVQPESSLAKG 289 (588)
T ss_dssp HHHHHHHHHHHHHTT----CEEECSCCEEEEEGG--GT---EEEETTSCEEECSEEEECSCEEECCHHHHH
T ss_pred HHHHHHHHHHHHHcC----CEEEECCeEEEEecC--CC---EEEECCCCEEEcCEEEEccCCCCChHHHHh
Confidence 456677777777665 799999999998753 22 366677877778999999998654 34443
No 207
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.18 E-value=0.00031 Score=73.68 Aligned_cols=33 Identities=33% Similarity=0.532 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+||+|||||.+|+++|..|+ +.|++|+|||+.
T Consensus 107 ~~dvvVIG~GpAGl~aA~~l~-~~g~~v~liE~~ 139 (598)
T 2x8g_A 107 DYDLIVIGGGSGGLAAGKEAA-KYGAKTAVLDYV 139 (598)
T ss_dssp SEEEEEECCSHHHHHHHHHHH-HTTCCEEEECCC
T ss_pred cccEEEECCCccHHHHHHHHH-hCCCeEEEEecc
Confidence 689999999999999999998 589999999984
No 208
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.16 E-value=0.0002 Score=72.43 Aligned_cols=58 Identities=7% Similarity=0.017 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
..+.+.+.+.+++.| ++++++++|+++..+ ++++..+.+ +|+.+.+|.||+|+|...+
T Consensus 191 ~~~~~~l~~~l~~~G----v~i~~~~~v~~i~~~--~~~v~~v~~-~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 191 KEFTDILAKDYEAHG----VNLVLGSKVAAFEEV--DDEIITKTL-DGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp HHHHHHHHHHHHHTT----CEEEESSCEEEEEEE--TTEEEEEET-TSCEEEESEEEECCCEEEC
T ss_pred hhHHHHHHHHHHHCC----CEEEcCCeeEEEEcC--CCeEEEEEe-CCCEEECCEEEECcCCCCC
Confidence 456677777777766 799999999999864 455555666 5666678999999997544
No 209
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.12 E-value=0.0052 Score=61.90 Aligned_cols=34 Identities=26% Similarity=0.446 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~-~~g~~Vtlv~~~~ 182 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYS-NQNYNVNLIDGHE 182 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-TTTCEEEEEESSS
T ss_pred CCeEEEECcCHHHHHHHHHHH-hcCCEEEEEEcCC
Confidence 357999999999999999997 5899999999863
No 210
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.10 E-value=0.00031 Score=68.93 Aligned_cols=58 Identities=14% Similarity=0.021 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH-HHHHH
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG-SLMHD 306 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~-~l~~~ 306 (495)
..+.+.+.+.+++.| ++++++++|+++.. + .|.+.+|+ +.+|.||+|+|...+ .++..
T Consensus 183 ~~~~~~l~~~l~~~g----V~i~~~~~v~~i~~---~----~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~ 241 (367)
T 1xhc_A 183 EELSNMIKDMLEETG----VKFFLNSELLEANE---E----GVLTNSGF-IEGKVKICAIGIVPNVDLARR 241 (367)
T ss_dssp HHHHHHHHHHHHHTT----EEEECSCCEEEECS---S----EEEETTEE-EECSCEEEECCEEECCHHHHH
T ss_pred HHHHHHHHHHHHHCC----CEEEcCCEEEEEEe---e----EEEECCCE-EEcCEEEECcCCCcCHHHHHh
Confidence 345666666666665 89999999998852 1 35667777 778999999997654 35544
No 211
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.09 E-value=0.00019 Score=75.79 Aligned_cols=34 Identities=18% Similarity=0.328 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCC--------ccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSD--------LSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G--------~~V~liE~~~ 115 (495)
..+|+|||||++|+++|+.|+ +.| ++|+|+|+++
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~-~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELG-RLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHH-HcCcccccCCCceEEEEeccC
Confidence 468999999999999999997 478 9999999975
No 212
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.09 E-value=0.0033 Score=63.93 Aligned_cols=34 Identities=32% Similarity=0.502 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~-~~g~~Vtlv~~~~ 219 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFV-ELGKKVRMIERND 219 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHH-HTTCEEEEECCGG
T ss_pred CCeEEEECCCHHHHHHHHHHH-hcCCeEEEEEeCC
Confidence 468999999999999999997 5999999999863
No 213
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.07 E-value=0.00033 Score=69.80 Aligned_cols=60 Identities=13% Similarity=0.149 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH-HHHHH
Q 011027 236 AMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG-SLMHD 306 (495)
Q Consensus 236 p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~-~l~~~ 306 (495)
+..+.+.+.+.+++.| ++++++++|+++. + + .|.+.+|+.+.+|.||+|+|...+ .++..
T Consensus 186 ~~~~~~~l~~~l~~~G----V~i~~~~~v~~i~-~--~----~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~ 246 (408)
T 2gqw_A 186 PATLADFVARYHAAQG----VDLRFERSVTGSV-D--G----VVLLDDGTRIAADMVVVGIGVLANDALARA 246 (408)
T ss_dssp CHHHHHHHHHHHHHTT----CEEEESCCEEEEE-T--T----EEEETTSCEEECSEEEECSCEEECCHHHHH
T ss_pred CHHHHHHHHHHHHHcC----cEEEeCCEEEEEE-C--C----EEEECCCCEEEcCEEEECcCCCccHHHHHh
Confidence 3456677777777765 7999999999987 3 3 466678877778999999998654 46554
No 214
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.05 E-value=0.00038 Score=70.97 Aligned_cols=57 Identities=23% Similarity=0.266 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
..+.+.+.+.+++.| ++++++++|+++.. +++++.+.+.++ .+.+|.||+|+|...+
T Consensus 227 ~~~~~~l~~~l~~~G----v~i~~~~~v~~i~~---~~~v~~v~~~~~-~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 227 GDMAEYIYKEADKHH----IEILTNENVKAFKG---NERVEAVETDKG-TYKADLVLVSVGVKPN 283 (480)
T ss_dssp HHHHHHHHHHHHHTT----CEEECSCCEEEEEE---SSBEEEEEETTE-EEECSEEEECSCEEES
T ss_pred HHHHHHHHHHHHHcC----cEEEcCCEEEEEEc---CCcEEEEEECCC-EEEcCEEEECcCCCcC
Confidence 456677777777765 79999999999975 345666776654 4567999999998654
No 215
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.03 E-value=0.00032 Score=70.76 Aligned_cols=57 Identities=18% Similarity=0.140 Sum_probs=41.1
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
..+.+.+.+.+++.| ++++++++|+++..+ ++++.+.+. +..+.+|.||+|+|...+
T Consensus 191 ~~~~~~l~~~l~~~g----v~i~~~~~v~~i~~~---~~v~~v~~~-~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 191 KEFTDVLTEEMEANN----ITIATGETVERYEGD---GRVQKVVTD-KNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp HHHHHHHHHHHHTTT----EEEEESCCEEEEECS---SBCCEEEES-SCEEECSEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCC----CEEEcCCEEEEEEcc---CcEEEEEEC-CCEEECCEEEECcCCCCC
Confidence 456677777777665 899999999998753 344456554 445667999999998654
No 216
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.02 E-value=0.0025 Score=64.28 Aligned_cols=34 Identities=18% Similarity=0.404 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~-~~g~~Vtlv~~~~ 203 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYA-NFGTKVTILEGAG 203 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-HcCCcEEEEEcCC
Confidence 368999999999999999997 5999999999863
No 217
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.02 E-value=0.0077 Score=62.18 Aligned_cols=34 Identities=21% Similarity=0.232 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|.+|+-+|..|+ +.+.+|+|+++..
T Consensus 185 ~krV~VIG~G~tgve~a~~la-~~~~~Vtv~~r~~ 218 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAA-ETAKELYVFQRTP 218 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHT-TTBSEEEEEESSC
T ss_pred CCeEEEECCCccHHHHHHHHH-hhCCEEEEEEcCC
Confidence 467999999999999999998 5899999999863
No 218
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.01 E-value=0.0041 Score=63.07 Aligned_cols=34 Identities=24% Similarity=0.398 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~-~~g~~Vtlv~~~~ 211 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQ-RLGADVTAVEFLG 211 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHH-HcCCEEEEEeccC
Confidence 357999999999999999997 5999999999863
No 219
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.00 E-value=0.0004 Score=76.87 Aligned_cols=38 Identities=34% Similarity=0.526 Sum_probs=33.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSG 119 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~g 119 (495)
.+||+|||||.+|+++|..|+ +.|++|+|||++....|
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la-~~G~~V~lie~~~~~GG 165 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREAS-RSGARVMLLDERAEAGG 165 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSSSSG
T ss_pred CCCEEEECCCHHHHHHHHHHH-hCCCcEEEEeCCCCCCc
Confidence 579999999999999999998 58999999999754333
No 220
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.00 E-value=0.00049 Score=76.68 Aligned_cols=38 Identities=18% Similarity=0.323 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCCcCCCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKVVPCSG 119 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~~~~~g 119 (495)
.+||+|||||.+|+++|+.|+ +.|+ +|+|||+....+|
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~-~~G~~~Vtv~E~~~~~GG 225 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLA-RLGYSDITIFEKQEYVGG 225 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHH-HTTCCCEEEEESSSSCST
T ss_pred CCEEEEECccHHHHHHHHHHH-hcCCCcEEEEeCCCCCCc
Confidence 579999999999999999998 5999 7999999754333
No 221
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.00 E-value=0.0042 Score=61.68 Aligned_cols=34 Identities=26% Similarity=0.511 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~-~~g~~Vtlv~~~~ 178 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATAR-TAGVHVSLVETQP 178 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-hCCCEEEEEEeCC
Confidence 367999999999999999997 5999999999864
No 222
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.97 E-value=0.00042 Score=70.00 Aligned_cols=35 Identities=23% Similarity=0.455 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhc-C------CccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVG-S------DLSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~-~------G~~V~liE~~~~ 116 (495)
.+||+|||||.+|+++|..|+ + . |.+|+|||+...
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~-~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLL-KAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHH-HHHHHSTTCCEEEEEEESSSS
T ss_pred CCEEEEECcCHHHHHHHHHHH-hhCccccCCCCeEEEEecCCC
Confidence 478999999999999999997 4 4 999999999743
No 223
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.95 E-value=0.004 Score=64.37 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|.+|+-+|..|+ +.|.+|+|+++..
T Consensus 191 ~krV~VIG~G~sgve~a~~l~-~~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIA-EQAEQLFVFQRSA 224 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HHBSEEEEEESSC
T ss_pred CCEEEEECCCchHHHHHHHHH-hhCCEEEEEECCC
Confidence 467999999999999999998 4899999999863
No 224
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.92 E-value=0.00052 Score=70.24 Aligned_cols=63 Identities=8% Similarity=0.063 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCe----eeecCeEEEccCcchHHHHHH
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNT----LYSKKAIVVAAGCWSGSLMHD 306 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~----~~~a~~VV~A~G~~s~~l~~~ 306 (495)
..+.+.+.+..++.| |++++++.|+++.. ++....+...+|+ .+.+|.||.|+|...+.+...
T Consensus 272 ~~~~~~~~~~L~~~G----V~v~~~~~v~~v~~---~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~ 338 (502)
T 4g6h_A 272 KKLSSYAQSHLENTS----IKVHLRTAVAKVEE---KQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITD 338 (502)
T ss_dssp HHHHHHHHHHHHHTT----CEEETTEEEEEECS---SEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHH
T ss_pred HHHHHHHHHHHHhcc----eeeecCceEEEEeC---CceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHh
Confidence 466677777777776 89999999999853 3333344455653 467899999999866544444
No 225
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.90 E-value=0.0006 Score=68.95 Aligned_cols=35 Identities=26% Similarity=0.425 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCC--ccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSD--LSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G--~~V~liE~~~~ 116 (495)
.+||+|||||.+|+++|..|++ .| ++|+|||+...
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~-~g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLK-HHSRAHVDIYEKQLV 42 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HCSSCEEEEECSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHh-cCCCCCEEEEeCCCc
Confidence 4789999999999999999984 67 99999999753
No 226
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.88 E-value=0.0077 Score=61.16 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+++|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~-~~g~~Vtlv~~~~ 218 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFH-GLGSETHLVIRGE 218 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-HcCCceEEEEeCC
Confidence 357999999999999999997 5999999999863
No 227
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.85 E-value=0.006 Score=62.17 Aligned_cols=34 Identities=29% Similarity=0.460 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~-~~g~~Vtlv~~~~ 227 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQ-RKGKEVVLIDVVD 227 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESSS
T ss_pred CceEEEECCCHHHHHHHHHHH-HCCCeEEEEEccc
Confidence 467999999999999999997 5899999999863
No 228
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.81 E-value=0.00068 Score=67.98 Aligned_cols=34 Identities=26% Similarity=0.431 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhc-CCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVG-SDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~-~G~~V~liE~~~ 115 (495)
.+|+|||||.+|+++|+.|++. .+.+|+|||++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 4699999999999999999742 348999999974
No 229
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.75 E-value=0.0084 Score=61.23 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+++|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~-~~g~~Vtlv~~~~ 215 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYT-ELGVPVTVVASQD 215 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHH-HTTCCEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-HcCCeEEEEEcCC
Confidence 357999999999999999997 5999999999863
No 230
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.75 E-value=0.0074 Score=61.09 Aligned_cols=33 Identities=27% Similarity=0.465 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~-~~g~~Vtlv~~~ 206 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWA-RLGAEVTVVEFA 206 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHH-HhCCEEEEEecC
Confidence 357999999999999999997 599999999986
No 231
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.74 E-value=0.0014 Score=68.36 Aligned_cols=65 Identities=14% Similarity=0.116 Sum_probs=50.5
Q ss_pred EEEeCCCceecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEcc
Q 011027 225 AAFLPYDSQLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAA 296 (495)
Q Consensus 225 ~~~~~~~g~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~ 296 (495)
++++|.+|. ..+.++|.+.+...| +.++++++|.+|..+++.+++.+|.+.+|+.+.||.||...
T Consensus 369 g~~yp~GG~---g~L~qaL~r~~~~~G----g~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~ 433 (650)
T 1vg0_A 369 PFLFPLYGQ---GELPQCFCRMCAVFG----GIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED 433 (650)
T ss_dssp SEEEETTCT---THHHHHHHHHHHHTT----CEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG
T ss_pred ceEEeCCch---hHHHHHHHHHHHHcC----CEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh
Confidence 677777774 578888888888877 59999999999988632277888887888878889777633
No 232
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.72 E-value=0.013 Score=59.91 Aligned_cols=34 Identities=12% Similarity=0.226 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~-~~g~~Vtlv~~~~ 209 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIK-RLGIDSYIFARGN 209 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-TTTCEEEEECSSS
T ss_pred CCeEEEECChHHHHHHHHHHH-HcCCeEEEEecCC
Confidence 357999999999999999997 5999999999863
No 233
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=96.63 E-value=0.0089 Score=60.72 Aligned_cols=33 Identities=30% Similarity=0.458 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~-~~G~~Vtlv~~~ 217 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYS-TLGSRLDVVEMM 217 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHH-HHTCEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-HcCCeEEEEEEC
Confidence 357999999999999999997 589999999985
No 234
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.55 E-value=0.0091 Score=57.97 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|.+|+-+|..|+ +.|.+|+|+++..
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~-~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLI-KNAASVTLVHRGH 196 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTT-TTSSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHH-hcCCEEEEEEcCC
Confidence 357999999999999999997 5899999999863
No 235
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=96.55 E-value=0.011 Score=56.49 Aligned_cols=34 Identities=18% Similarity=0.078 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|.+|+-+|..|+ +.|.+|+++++..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~-~~g~~v~~v~~~~ 206 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLT-KYGSKVFMLVRKD 206 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHT-TTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHH-hcCCEEEEEEcCC
Confidence 357999999999999999997 5899999999853
No 236
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.38 E-value=0.0016 Score=65.34 Aligned_cols=52 Identities=6% Similarity=-0.030 Sum_probs=38.1
Q ss_pred HHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch
Q 011027 238 LAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 238 ~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s 300 (495)
.+.+.+.+..++.| +.++.+++|+++.. . .+.+.+|+.+.+|.||+|+|.-.
T Consensus 189 ~~~~~~~~~l~~~g----V~i~~~~~v~~~~~----~---~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 189 DMNQPILDELDKRE----IPYRLNEEINAING----N---EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp GGGHHHHHHHHHTT----CCEEESCCEEEEET----T---EEEETTSCEEECSEEEECCCEEE
T ss_pred hhHHHHHHHhhccc----eEEEeccEEEEecC----C---eeeecCCeEEeeeeEEEEeceec
Confidence 34455566666655 79999999988742 2 36677888888899999999754
No 237
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.26 E-value=0.036 Score=52.28 Aligned_cols=34 Identities=18% Similarity=0.159 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|..|+-+|..|+ +.|.+|+++++..
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~-~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLA-NICKKVYLIHRRD 176 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHH-TTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHH-hcCCEEEEEeeCC
Confidence 367999999999999999997 5899999999853
No 238
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=96.22 E-value=0.034 Score=56.56 Aligned_cols=34 Identities=26% Similarity=0.453 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~-~~g~~Vtlv~~~~ 231 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWA-RLGAKVTVVEFLD 231 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HHTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-HcCCEEEEEeccc
Confidence 357999999999999999997 5899999998753
No 239
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.18 E-value=0.01 Score=59.96 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~-~~g~~Vtli~~~~ 210 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWG-RIGSEVTVVEFAS 210 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHH-HHTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-HcCCcEEEEEcCC
Confidence 357999999999999999997 5899999999863
No 240
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.17 E-value=0.021 Score=58.01 Aligned_cols=32 Identities=31% Similarity=0.425 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+++|||||.+|+-+|..|+ +.|.+|+|+++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~-~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLK-GLGYEPTVMVRS 219 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHH-HcCCEEEEEeCC
Confidence 57999999999999999998 599999999874
No 241
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=96.14 E-value=0.031 Score=56.54 Aligned_cols=33 Identities=27% Similarity=0.423 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||+|.+|+-+|..|+ +.|.+|+|+++.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~-~~g~~Vtlv~~~ 212 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWA-RLGAEVTVLEAM 212 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHH-HcCCcEEEEecC
Confidence 357999999999999999997 599999999985
No 242
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.10 E-value=0.031 Score=58.22 Aligned_cols=34 Identities=24% Similarity=0.461 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+++..
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~-~~g~~Vtlv~~~~ 220 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLR-ERGIEVTLVEMAN 220 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-hCCCeEEEEecCC
Confidence 357999999999999999998 5999999999863
No 243
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.05 E-value=0.023 Score=57.17 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcC--CccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGS--DLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~--G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|++ . |.+|+++++..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~-~~~~~~Vt~v~r~~ 262 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLND-SYPSVQADMILRAS 262 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-HCTTEEEEEECSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHh-cCCCCeEEEEEeCC
Confidence 4679999999999999999985 6 89999999864
No 244
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=95.98 E-value=0.057 Score=50.85 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||+|..|+-+|..|+ +.|.+|+++++.
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~-~~g~~v~~~~~~ 179 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLA-NICSKIYLIHRR 179 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHH-TTSSEEEEECSS
T ss_pred cCEEEEECCCHHHHHHHHHHH-hhCCEEEEEEeC
Confidence 357999999999999999997 589999999985
No 245
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.77 E-value=0.0072 Score=57.38 Aligned_cols=32 Identities=28% Similarity=0.460 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|+|||+|.+|...|..+| ..|++|+|+|..
T Consensus 7 ~~VaViGaG~MG~giA~~~a-~~G~~V~l~D~~ 38 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFA-SGGFRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCEEEECSC
T ss_pred CeEEEECCcHHHHHHHHHHH-hCCCeEEEEECC
Confidence 56999999999999999999 599999999975
No 246
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.72 E-value=0.013 Score=48.41 Aligned_cols=33 Identities=24% Similarity=0.551 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||+|-.|..+|..|. +.|++|+++|++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~-~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLL-ASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHH-HTTCCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHH-HCCCCEEEEECC
Confidence 467999999999999999997 599999999996
No 247
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.33 E-value=0.016 Score=47.88 Aligned_cols=32 Identities=31% Similarity=0.570 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+|+|+|+|-.|..+|..|+ +.|++|+++|++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~-~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELT-AAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHH-HTTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHH-HCCCeEEEEECC
Confidence 46999999999999999997 589999999986
No 248
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.18 E-value=0.017 Score=47.27 Aligned_cols=32 Identities=28% Similarity=0.491 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+|+|||+|-.|..+|..|+ +.|++|+++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~-~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLS-EKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCeEEEEECC
Confidence 46999999999999999997 589999999985
No 249
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.14 E-value=0.02 Score=48.18 Aligned_cols=34 Identities=38% Similarity=0.421 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
...|+|||+|-.|..+|..|. +.|++|+++|++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~-~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLAS-SSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHH-hCCCeEEEEECCH
Confidence 457999999999999999997 5899999999863
No 250
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.09 E-value=0.16 Score=52.21 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||+|.+|+-+|..|++ .|.+|+++++.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~-~~~~vtv~~r~ 218 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAK-QAAELFVFQRT 218 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-HBSEEEEEESS
T ss_pred CCEEEEECCCccHHHHHHHHhh-cCceEEEEEcC
Confidence 4679999999999999999984 79999999985
No 251
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.08 E-value=0.02 Score=45.26 Aligned_cols=32 Identities=41% Similarity=0.581 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCC-ccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSD-LSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G-~~V~liE~~ 114 (495)
..|+|+|+|.+|..+|..|. +.| ++|+++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~-~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLK-TSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHH-HCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHH-hCCCceEEEEeCC
Confidence 56999999999999999998 489 999999985
No 252
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.06 E-value=0.02 Score=54.22 Aligned_cols=32 Identities=31% Similarity=0.531 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.|||+|..|..+|..|+ +.|++|+++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la-~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAA-ATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCeEEEEECC
Confidence 46999999999999999998 489999999985
No 253
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.94 E-value=0.037 Score=55.27 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.|||+|..|..+|..|+ +.|++|+++|+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la-~aG~~V~l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFG-LAGIETFLVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHH-HCCCeEEEEECc
Confidence 57999999999999999998 599999999986
No 254
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.85 E-value=0.03 Score=46.97 Aligned_cols=33 Identities=21% Similarity=0.313 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||+|-.|...|..|. +.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~-~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLN-QRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHH-HTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHH-HCCCCEEEEECC
Confidence 356999999999999999997 589999999985
No 255
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=94.74 E-value=0.023 Score=53.77 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+|+|||||.+|+-+|..|+ +.|.+|+|+|+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~-~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLT-KFADKVTIVHRRD 178 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHT-TTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHH-hcCCEEEEEeccc
Confidence 57999999999999999997 6999999999863
No 256
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=94.53 E-value=0.024 Score=55.74 Aligned_cols=33 Identities=24% Similarity=0.433 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~-~~g~~Vtvv~~~~ 179 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAII-DSGTPASIGIILE 179 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHH-HHTCCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHH-hCCCeEEEEEcCC
Confidence 57999999999999999998 5899999999864
No 257
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.51 E-value=0.034 Score=52.04 Aligned_cols=32 Identities=28% Similarity=0.392 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.|||+|..|..+|..|+ +.|++|+++|+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la-~~G~~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTA-FHGFAVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCeEEEEeCC
Confidence 46999999999999999998 599999999985
No 258
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.42 E-value=0.032 Score=53.14 Aligned_cols=32 Identities=28% Similarity=0.460 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.|||+|..|.+.|..|+ +.|++|+++|+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la-~~G~~V~l~d~~ 38 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFA-SGGFRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCEEEECSC
T ss_pred ceEEEEeeCHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 46999999999999999998 599999999985
No 259
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.25 E-value=0.039 Score=52.15 Aligned_cols=33 Identities=15% Similarity=0.226 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+++.
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~-~~G~~Vt~v~~~ 184 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLT-KYGSKVIILHRR 184 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHT-TTSSEEEEECSS
T ss_pred CCeEEEECCChHHHHHHHHHH-HhCCeeeeeccc
Confidence 357999999999999999997 699999999975
No 260
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.10 E-value=0.039 Score=45.27 Aligned_cols=32 Identities=28% Similarity=0.324 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+|+|+|+|-.|..+|..|. +.|++|+++|+.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~-~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELH-RMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHH-HTTCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 46999999999999999997 589999999986
No 261
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.05 E-value=0.031 Score=56.33 Aligned_cols=34 Identities=24% Similarity=0.399 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~-~~g~~Vtlv~~~~ 204 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYR-KLGAQVSVVEARE 204 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HHTCEEEEECSSS
T ss_pred CCeEEEECcCHHHHHHHHHHH-HCCCeEEEEEcCC
Confidence 357999999999999999997 5899999999863
No 262
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.01 E-value=0.043 Score=47.51 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcC-CccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGS-DLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~-G~~V~liE~~ 114 (495)
..+|+|||+|-.|..+|..|. +. |++|+++|++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~-~~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELR-ARYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHH-HHHCSCEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHH-hccCCeEEEEECC
Confidence 357999999999999999997 58 9999999986
No 263
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.95 E-value=0.045 Score=52.23 Aligned_cols=33 Identities=27% Similarity=0.468 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+|+|||+|-.|.+.|..|+ +.|.+|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~-~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLA-KTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHH-HTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHH-hCCCeEEEEeCCh
Confidence 46999999999999999998 5899999999863
No 264
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.91 E-value=0.039 Score=53.78 Aligned_cols=33 Identities=33% Similarity=0.551 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~-~~g~~Vtlv~~~~ 176 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLA-EAGYHVKLIHRGA 176 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHH-hCCCEEEEEeCCC
Confidence 57999999999999999997 5999999999864
No 265
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.82 E-value=0.056 Score=50.69 Aligned_cols=32 Identities=34% Similarity=0.519 Sum_probs=29.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|.|||+|.+|...|..|+ .|++|+++|+.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la--aG~~V~v~d~~ 43 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA--SKHEVVLQDVS 43 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH--TTSEEEEECSC
T ss_pred CCeEEEEeeCHHHHHHHHHHH--cCCEEEEEECC
Confidence 467999999999999999996 79999999985
No 266
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=93.63 E-value=0.054 Score=54.36 Aligned_cols=34 Identities=21% Similarity=0.350 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~-~~g~~Vtlv~~~~ 200 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVIN-GLGAKTHLFEMFD 200 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-hcCCEEEEEEeCC
Confidence 357999999999999999997 5899999999863
No 267
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.62 E-value=0.046 Score=51.91 Aligned_cols=33 Identities=27% Similarity=0.352 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+|+|||+|-.|.+.|..|+ +.|.+|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~-~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQ-RSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHH-HTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHH-HCCCeEEEEEcCc
Confidence 46999999999999999998 5899999999863
No 268
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.48 E-value=0.054 Score=48.40 Aligned_cols=31 Identities=32% Similarity=0.536 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
+|+|||+|-.|..+|..|. +.|++|+++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~-~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSML-SRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHH-HTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHH-hCCCeEEEEECC
Confidence 5999999999999999997 589999999986
No 269
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.45 E-value=0.058 Score=51.38 Aligned_cols=33 Identities=30% Similarity=0.398 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
...|+|||+|..|.++|..|++ .|+ +|+|+|..
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~-~g~~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGK-DNLADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCceEEEEeCC
Confidence 3579999999999999999984 788 99999985
No 270
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.39 E-value=0.06 Score=54.34 Aligned_cols=33 Identities=27% Similarity=0.409 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|.|||+|..|+.+|..|+ +.|++|+++|++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la-~~G~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLA-DIGHDVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSC
T ss_pred CceEEEECcCHHHHHHHHHHH-hCCCEEEEEECC
Confidence 467999999999999999998 599999999985
No 271
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.37 E-value=0.064 Score=53.97 Aligned_cols=32 Identities=28% Similarity=0.363 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.|||+|..|..+|..|+ +.|++|+++|+.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la-~~G~~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFA-RVGISVVAVESD 69 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTTCEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHH-hCCCeEEEEECC
Confidence 46999999999999999998 599999999985
No 272
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.23 E-value=0.067 Score=53.55 Aligned_cols=32 Identities=25% Similarity=0.460 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+|.|||+|..|+.+|..|+ +.|++|+++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La-~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFA-ELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHH-hcCCEEEEEECC
Confidence 46999999999999999998 489999999986
No 273
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=93.10 E-value=0.069 Score=53.81 Aligned_cols=33 Identities=39% Similarity=0.395 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~-~~G~~Vtlv~~~~ 199 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLR-SFGSEVTVVALED 199 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHH-hcCCEEEEEEcCC
Confidence 57999999999999999997 5999999999863
No 274
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.05 E-value=0.088 Score=49.88 Aligned_cols=33 Identities=27% Similarity=0.529 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|.|||.|..|...|..|+ +.|++|+++++.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~-~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLL-KNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHH-HCCCeEEEEeCC
Confidence 357999999999999999998 599999999986
No 275
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.99 E-value=0.085 Score=46.80 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
...|.|||+|-.|.+.|..|+ +.|.+|+++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~-~~g~~V~~~~~~~ 52 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFE-IAGHEVTYYGSKD 52 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHH-HTTCEEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHH-HCCCEEEEEcCCH
Confidence 356999999999999999998 5899999999863
No 276
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.99 E-value=0.08 Score=52.80 Aligned_cols=34 Identities=26% Similarity=0.395 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..++.|||.|..|+.+|..|+ +.|++|+++|++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La-~~G~~V~~~D~~~ 41 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFS-DFGHEVVCVDKDA 41 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCS
T ss_pred ceEEEEEcCCHHHHHHHHHHH-HCCCEEEEEeCCH
Confidence 467999999999999999999 4999999999863
No 277
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.97 E-value=0.082 Score=50.60 Aligned_cols=32 Identities=34% Similarity=0.502 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
.+|+|||||-.|.++|..|++ .|+ +|+|+|.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~-~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCAL-RELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCCeEEEEECC
Confidence 579999999999999999985 787 99999985
No 278
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.95 E-value=0.082 Score=50.26 Aligned_cols=32 Identities=25% Similarity=0.401 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
..|+|||+|-.|.+.|+.|+ +.|. +|+++|++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~-~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAA-QRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCC
Confidence 57999999999999999998 4888 99999985
No 279
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.95 E-value=0.085 Score=48.11 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|.|||+|..|.+.|..|+ +.|++|+++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~-~~G~~V~~~~r~ 51 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALA-DLGHEVTIGTRD 51 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 467999999999999999998 589999999986
No 280
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.92 E-value=0.092 Score=50.38 Aligned_cols=32 Identities=22% Similarity=0.356 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+|+|||+|-.|.+.|..|+ +.|.+|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~-~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLA-LAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHH-HTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHH-HCCCEEEEEECh
Confidence 46999999999999999998 589999999984
No 281
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.86 E-value=0.059 Score=50.65 Aligned_cols=32 Identities=34% Similarity=0.484 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+|+|||+|-.|.+.|..|+ +.|.+|++++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~-~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQ-QSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HHCTTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHH-HCCCeEEEEEec
Confidence 46999999999999999998 489999999986
No 282
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.83 E-value=0.089 Score=49.10 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
+|.|||+|..|...|..|+ +.|++|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~-~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALC-KQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHH-HTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHH-hCCCCEEEEEcCc
Confidence 4899999999999999998 5999999999863
No 283
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.83 E-value=0.11 Score=46.52 Aligned_cols=33 Identities=21% Similarity=0.385 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|+|||||-+|...|..|. +.|.+|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll-~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFL-QEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHG-GGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHH-HCCCEEEEECCC
Confidence 467999999999999999997 589999999863
No 284
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.83 E-value=0.087 Score=53.18 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.|||+|..|..+|..|+ +.|++|+++|++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la-~aG~~V~l~D~~ 37 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAA-SHGHQVLLYDIS 37 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HTTCCEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHH-HCCCeEEEEECC
Confidence 46999999999999999998 599999999985
No 285
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.79 E-value=0.11 Score=50.22 Aligned_cols=33 Identities=24% Similarity=0.272 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|.|||+|..|.+.|..|+ +.|++|++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La-~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLA-RKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHH-TTTCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHH-HCCCeEEEEeCC
Confidence 357999999999999999998 599999999985
No 286
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.76 E-value=0.095 Score=50.06 Aligned_cols=32 Identities=47% Similarity=0.520 Sum_probs=29.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
..|+|||||..|.++|+.|++ .|+ +|+|+|.+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-~g~~~V~L~Di~ 47 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-KDLGDVYMFDII 47 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCCeEEEEECC
Confidence 469999999999999999984 888 99999985
No 287
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=92.73 E-value=0.24 Score=51.53 Aligned_cols=39 Identities=36% Similarity=0.401 Sum_probs=34.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcCCCC
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVPCSG 119 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~~~g 119 (495)
+++||+|||+|+.|+..|..|+ +.|++|++|||+..-+|
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~-~~g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACS-RSGQRVLHVDSRSYYGG 45 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSSSCG
T ss_pred CcCCEEEECCcHHHHHHHHHHH-hCCCEEEEEcCCCcccC
Confidence 3799999999999999999998 59999999999865333
No 288
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.55 E-value=0.1 Score=50.09 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
+.+|.|||+|..|...|..|+ +.|++|+++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~-~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLH-ENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHH-hCCCeEEEEeCC
Confidence 467999999999999999998 599999999985
No 289
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.54 E-value=0.097 Score=49.47 Aligned_cols=32 Identities=25% Similarity=0.425 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+|.|||+|..|...|..|+ +.|++|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~-~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLH-QGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHH-hCCCcEEEEECC
Confidence 46999999999999999998 589999999985
No 290
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.48 E-value=0.11 Score=49.38 Aligned_cols=32 Identities=28% Similarity=0.602 Sum_probs=28.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
..|+|||+|-+|.++|+.|+. .|+ +|+|+|.+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~-~g~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQ-KNLGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCCeEEEEeCC
Confidence 579999999999999999984 787 89999975
No 291
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=92.40 E-value=0.099 Score=52.08 Aligned_cols=34 Identities=26% Similarity=0.589 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~-~~G~~Vtlv~~~~ 182 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAI-KANMHVTLLDTAA 182 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-hCCCEEEEEEeCC
Confidence 357999999999999999997 5999999999864
No 292
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=92.38 E-value=0.098 Score=52.62 Aligned_cols=34 Identities=29% Similarity=0.458 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~-~~g~~Vtlv~~~~ 204 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLK-NYGVDVTIVEFLP 204 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CCeEEEECCcHHHHHHHHHHH-HcCCeEEEEEcCC
Confidence 357999999999999999997 5999999999863
No 293
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=92.32 E-value=0.11 Score=52.80 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+++..
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~-~~g~~Vtlv~~~~ 207 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALS-RLGVIVKVFGRSG 207 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHH-HTTCEEEEECCTT
T ss_pred CCeEEEECCCHHHHHHHHHHH-HcCCeEEEEEECC
Confidence 357999999999999999998 5999999999864
No 294
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.30 E-value=0.1 Score=49.02 Aligned_cols=34 Identities=24% Similarity=0.288 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|.|||.|..|...|..|+ +.|++|+++|+..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~-~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMT-EWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHT-TSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHH-HCCCeEEEEeCCH
Confidence 357999999999999999997 5999999999863
No 295
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=92.28 E-value=0.087 Score=52.95 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcC-Cc-cEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGS-DL-SVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~-G~-~V~liE~~~ 115 (495)
...|.|||+|..|+.+|..|++ . |+ +|+++|++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~-~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFAD-APCFEKVLGFQRNS 53 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH-STTCCEEEEECCCC
T ss_pred CCEEEEECcCHHHHHHHHHHHH-hCCCCeEEEEECCh
Confidence 3579999999999999999995 8 99 999999863
No 296
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.25 E-value=0.13 Score=48.67 Aligned_cols=31 Identities=29% Similarity=0.494 Sum_probs=28.3
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
.|+|||+|-.|.++|+.|++ .|+ +|+|+|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~-~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-RGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCC
Confidence 58999999999999999984 888 99999986
No 297
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.22 E-value=0.11 Score=51.53 Aligned_cols=33 Identities=18% Similarity=0.161 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|+|||.|..|+.+|..|| +.|++|+.+|-+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A-~~G~~V~g~Did 53 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFA-LLGHRVVGYDVN 53 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCEEEEECSC
T ss_pred CCEEEEEccCHHHHHHHHHHH-hCCCcEEEEECC
Confidence 468999999999999999999 489999999975
No 298
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=92.19 E-value=0.11 Score=53.24 Aligned_cols=33 Identities=18% Similarity=0.236 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
+.+++|||||++|+=.|..++ +.|.+|+|+++.
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~-~lG~~VTii~~~ 255 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLN-SLGYDVTVAVRS 255 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHH-HHTCCEEEEESS
T ss_pred CceEEEECCCHHHHHHHHHHH-hcCCeEEEeccc
Confidence 367999999999999999997 599999999875
No 299
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.13 E-value=0.1 Score=50.38 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=28.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+|+|||+|.+|+-+|..|+ +.|.+|+|+++.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~-~~g~~V~lv~~~ 198 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLA-KNGSDIALYTST 198 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHH-HTTCEEEEECC-
T ss_pred CEEEEECCCcCHHHHHHHHH-hcCCeEEEEecC
Confidence 47999999999999999998 589999999985
No 300
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.08 E-value=0.082 Score=48.88 Aligned_cols=33 Identities=24% Similarity=0.429 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|+|||||-+|+..|..|. +.|.+|+|++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll-~~Ga~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLM-PTGCKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHG-GGTCEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHH-hCCCEEEEEcCC
Confidence 467999999999999999997 599999999874
No 301
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.99 E-value=0.09 Score=52.80 Aligned_cols=33 Identities=39% Similarity=0.726 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|+|+|-.|.++|..|. ..|++|+|||++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~-~~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLV-GENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTC-STTEEEEEEESC
T ss_pred cCEEEEECCCHHHHHHHHHHH-HCCCCEEEEECC
Confidence 357999999999999999997 589999999997
No 302
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.99 E-value=0.12 Score=49.78 Aligned_cols=32 Identities=25% Similarity=0.110 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+|+|||+|..|...|..|+ +.|++|+++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~-~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLA-LKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHH-hCCCEEEEEeCC
Confidence 47999999999999999998 589999999985
No 303
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.94 E-value=0.15 Score=48.37 Aligned_cols=33 Identities=39% Similarity=0.453 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
..+|+|||+|..|.++|+.|++ .|+ +|+|+|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~-~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQ-KELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCeEEEEecc
Confidence 3579999999999999999984 898 99999986
No 304
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.94 E-value=0.15 Score=48.30 Aligned_cols=32 Identities=31% Similarity=0.431 Sum_probs=28.4
Q ss_pred cEEEECCCHHHHHHHHHHHhc-CCccEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVG-SDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~-~G~~V~liE~~ 114 (495)
.|+|||+|-.|.++|..|+++ .|.+|+++|++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 589999999999999999853 48899999986
No 305
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=91.93 E-value=0.1 Score=52.03 Aligned_cols=33 Identities=21% Similarity=0.440 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+++|||||.+|+-.|..|+ +.|.+|+|+|+..
T Consensus 148 ~~vvViGgG~ig~E~A~~l~-~~g~~Vtlv~~~~ 180 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLY-ERGLHPTLIHRSD 180 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCEEEEEESSS
T ss_pred cEEEEECCccchhhhHHHHH-hcCCcceeeeeec
Confidence 47999999999999999997 5999999999864
No 306
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.91 E-value=0.15 Score=48.27 Aligned_cols=31 Identities=35% Similarity=0.413 Sum_probs=28.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+|+|||+|-.|.+.|..|+ .|.+|++++++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~--~g~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS--LYHDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH--TTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh--cCCceEEEECC
Confidence 56999999999999999995 79999999985
No 307
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=91.85 E-value=0.14 Score=48.18 Aligned_cols=34 Identities=26% Similarity=0.291 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|.+|+-+|..|+ +.|.+|+++++..
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~-~~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLA-GIVEHVTLLEFAP 177 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-TTBSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHH-HhCCEEEEEEeCc
Confidence 357999999999999999997 5899999999863
No 308
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=91.85 E-value=0.14 Score=54.57 Aligned_cols=32 Identities=34% Similarity=0.469 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.|||+|..|..+|..|+ +.|++|+++|+.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la-~aG~~V~l~D~~ 344 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALI-LSNYPVILKEVN 344 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHH-TTTCCEEEECSS
T ss_pred cEEEEEcCCHhhHHHHHHHH-hCCCEEEEEECC
Confidence 46999999999999999998 599999999986
No 309
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.84 E-value=0.14 Score=48.30 Aligned_cols=33 Identities=36% Similarity=0.439 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|.|||.|..|...|..|+ +.|++|+++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~-~~G~~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCL-RAGLSTWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHH-HCCCeEEEEECC
Confidence 357999999999999999998 599999999986
No 310
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=91.83 E-value=0.13 Score=50.87 Aligned_cols=34 Identities=26% Similarity=0.445 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~-~~g~~Vtvv~~~~ 176 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTAR-KLGLSVTILEAGD 176 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-hCCCeEEEEecCC
Confidence 357999999999999999997 5999999999863
No 311
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.80 E-value=0.14 Score=50.66 Aligned_cols=31 Identities=26% Similarity=0.449 Sum_probs=28.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.|||.|..|+.+|..|+ + |++|+++|++
T Consensus 37 mkIaVIGlG~mG~~lA~~La-~-G~~V~~~D~~ 67 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIA-Q-NHEVVALDIV 67 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-TSEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHH-c-CCeEEEEecC
Confidence 57999999999999999997 5 9999999986
No 312
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.77 E-value=0.13 Score=48.81 Aligned_cols=32 Identities=25% Similarity=0.370 Sum_probs=28.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||+|-.|.+.|..|+ +.|.+|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~-~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLA-RAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHH-HTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHH-HCCCeEEEE-Ec
Confidence 457999999999999999998 599999999 64
No 313
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.74 E-value=0.15 Score=47.68 Aligned_cols=33 Identities=27% Similarity=0.441 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..|.|||.|..|...|..|+ +.|++|+++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~-~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLV-KAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHH-HCCCeEEEEcCCH
Confidence 35999999999999999998 5999999999863
No 314
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.63 E-value=0.14 Score=51.10 Aligned_cols=34 Identities=29% Similarity=0.516 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCcC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVVP 116 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~~ 116 (495)
..|+|||.|.+|+++|..|+ ++|++|+++|.+..
T Consensus 6 ~~v~viG~G~~G~~~a~~l~-~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFL-ARGVTPRVMDTRMT 39 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHH-TTTCCCEEEESSSS
T ss_pred CEEEEEeecHHHHHHHHHHH-hCCCEEEEEECCCC
Confidence 46999999999999999987 69999999998743
No 315
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=91.58 E-value=0.23 Score=52.68 Aligned_cols=33 Identities=27% Similarity=0.352 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
-..|.|||||++|..+|+.++ +.|++|+|+|..
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a-~aG~~V~l~D~~ 348 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFA-RVGISVVAVESD 348 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTTCEEEEECSS
T ss_pred ccEEEEEcccHHHHHHHHHHH-hCCCchhcccch
Confidence 467999999999999999999 599999999975
No 316
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.58 E-value=0.12 Score=47.17 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~~~ 116 (495)
..+|+|||+|-.|..+|..|+ +.|. +++|+|++..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La-~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLA-SAGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-HcCCCeEEEEcCCCc
Confidence 467999999999999999998 4897 8999998743
No 317
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=91.58 E-value=0.13 Score=51.36 Aligned_cols=33 Identities=27% Similarity=0.485 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+|+|||||.+|+-+|..|+ +.|.+|+|+++..
T Consensus 149 ~~vvViGgG~~g~E~A~~l~-~~g~~Vtlv~~~~ 181 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFA-AQGKNVTMIVRGE 181 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHH-hCCCeEEEEEcCC
Confidence 58999999999999999997 5999999999864
No 318
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.40 E-value=0.17 Score=45.52 Aligned_cols=33 Identities=15% Similarity=0.275 Sum_probs=29.8
Q ss_pred cccEEEECC-CHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGA-GIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGa-GiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|+|.|| |..|..+|.+|+ ++|++|+++.|.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~-~~G~~V~~~~R~ 54 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELK-NKGHEPVAMVRN 54 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESS
T ss_pred CCeEEEECCCChHHHHHHHHHH-hCCCeEEEEECC
Confidence 457999998 999999999998 489999999985
No 319
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.35 E-value=0.091 Score=43.41 Aligned_cols=32 Identities=19% Similarity=0.365 Sum_probs=28.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|+|||+|-+|..+|..|+ +.|.+|+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~-~~g~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFS-YPQYKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCC-TTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCEEEEEcCC
Confidence 56999999999999999996 589999999874
No 320
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=91.35 E-value=0.16 Score=48.30 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|.+|+-+|..|+ +.|.+|+|+++..
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~-~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLT-KYGSKVYIIHRRD 192 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHT-TTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHH-hcCCeEEEEecCC
Confidence 457999999999999999997 5899999999863
No 321
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.34 E-value=0.17 Score=49.35 Aligned_cols=33 Identities=21% Similarity=0.323 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|+|||+|.+|+.+|..|. ..|.+|+++|+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~-~lGa~V~v~D~~ 222 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATAR-RLGAVVSATDVR 222 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHH-HCCCEEEEEcCC
Confidence 467999999999999999886 699999999986
No 322
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.34 E-value=0.12 Score=51.43 Aligned_cols=31 Identities=29% Similarity=0.313 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.|.|||+|.+|+.+|..|+ +.|++|+++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la-~~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLS-ARGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHH-HTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHH-HCCCEEEEEECC
Confidence 4899999999999999998 489999999985
No 323
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=91.33 E-value=0.15 Score=51.28 Aligned_cols=34 Identities=18% Similarity=0.339 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~-~~g~~Vtlv~~~~ 209 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFA-RLGSKVTVLARNT 209 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCEEEEEEECC
Confidence 357999999999999999997 5999999999863
No 324
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.27 E-value=0.19 Score=47.49 Aligned_cols=32 Identities=38% Similarity=0.583 Sum_probs=28.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
..|+|||+|-+|.++|+.|+. .|. +|+|+|..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-~g~~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-KELGDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCCeEEEEeCC
Confidence 469999999999999999984 786 89999975
No 325
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=91.26 E-value=0.17 Score=47.80 Aligned_cols=34 Identities=21% Similarity=0.202 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|.+|+-+|..|+ +.|.+|+++++..
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~-~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLS-NIASEVHLIHRRD 178 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHT-TTSSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-hcCCeEEEEEeCC
Confidence 357999999999999999997 5899999999863
No 326
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.24 E-value=0.2 Score=44.61 Aligned_cols=33 Identities=30% Similarity=0.427 Sum_probs=29.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|.|||+|-.|...|..|+ +.|++|++++++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~-~~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLV-GSGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHH-HTTCCEEEEESS
T ss_pred CCEEEEEccCHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 357999999999999999998 589999999985
No 327
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=91.15 E-value=0.17 Score=47.88 Aligned_cols=34 Identities=21% Similarity=0.178 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|.+|+-+|..|+ +.|.+|+|+++..
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~-~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLT-KFADEVTVIHRRD 185 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHT-TTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHH-hcCCEEEEEeCCC
Confidence 357999999999999999997 5899999999853
No 328
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.14 E-value=0.16 Score=50.00 Aligned_cols=30 Identities=27% Similarity=0.491 Sum_probs=27.7
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.|.|||+|.+|+.+|..|+ + |++|+++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La-~-G~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLS-L-QNEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHT-T-TSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHh-C-CCEEEEEECC
Confidence 4899999999999999997 5 9999999985
No 329
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=91.13 E-value=0.16 Score=52.92 Aligned_cols=32 Identities=25% Similarity=0.254 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+|+|||||.+|+-+|..|+ +.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~-~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLA-SLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHH-HTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHH-HcCCEEEEEECC
Confidence 47999999999999999998 599999999985
No 330
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=91.07 E-value=0.14 Score=51.24 Aligned_cols=34 Identities=26% Similarity=0.223 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|.|||.|.+|.++|..|+ ++|++|++.|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~-~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLA-KLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHH-HTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHH-hCCCEEEEEeCCc
Confidence 357999999999999999997 5999999999853
No 331
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=91.03 E-value=0.13 Score=49.83 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
+|.|||+|..|.+.|..|+ +.|++|+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~-~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLS-KKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHT-TTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHH-hCCCEEEEEECC
Confidence 7999999999999999997 589999999985
No 332
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=91.03 E-value=0.18 Score=48.03 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||+|.+|+-+|..|+ +.|.+|+|+++.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~-~~g~~V~l~~~~ 187 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLT-RFARSVTLVHRR 187 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHT-TTCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHH-HhCCeEEEEEcC
Confidence 367999999999999999997 589999999985
No 333
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.98 E-value=0.24 Score=46.77 Aligned_cols=33 Identities=36% Similarity=0.593 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|.|||.|..|...|..|+ +.|++|+++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~-~~G~~V~~~dr~ 41 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLL-KQGKRVAIWNRS 41 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHH-HTTCCEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 357999999999999999998 599999999986
No 334
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.97 E-value=0.2 Score=47.63 Aligned_cols=32 Identities=28% Similarity=0.292 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCC-ccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSD-LSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G-~~V~liE~~ 114 (495)
..|.|||.|..|...|..|+ +.| ++|+++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~-~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLG-GRNAARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTTCSEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHH-HcCCCeEEEEeCC
Confidence 56999999999999999998 599 999999986
No 335
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=90.86 E-value=0.15 Score=48.74 Aligned_cols=30 Identities=27% Similarity=0.405 Sum_probs=27.9
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCccEEEEcC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDK 113 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~~V~liE~ 113 (495)
.|.|||+|..|...|..|+ +.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~-~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLV-DNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHH-HHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHH-hCCCeEEEEEc
Confidence 4899999999999999998 58999999998
No 336
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=90.84 E-value=0.23 Score=43.87 Aligned_cols=31 Identities=23% Similarity=0.347 Sum_probs=28.1
Q ss_pred cEEEEC-CCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 83 DVIIIG-AGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIG-aGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.|+||| +|-.|...|..|+ +.|++|+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~-~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLA-TLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHH-TTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 489999 9999999999998 589999999874
No 337
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=90.82 E-value=0.2 Score=50.12 Aligned_cols=33 Identities=12% Similarity=0.050 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCcc-EEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLS-VAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~-V~liE~~ 114 (495)
..+|+|||+|.+|+=+|..|+ +.|.+ |+|+++.
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~-~~~~~~V~l~~r~ 245 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLT-PVAKHPIYQSLLG 245 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHT-TTSCSSEEEECTT
T ss_pred CCEEEEEccCcCHHHHHHHHH-HHhCCcEEEEeCC
Confidence 467999999999999999997 58998 9999985
No 338
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.81 E-value=0.21 Score=49.37 Aligned_cols=33 Identities=36% Similarity=0.502 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||.|-.|..+|..|. +.|++|++||++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~-~~g~~vvvId~d 36 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLL-SSGVKMVVLDHD 36 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHH-HTTCCEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHH-HCCCCEEEEECC
Confidence 357999999999999999997 599999999986
No 339
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.75 E-value=0.23 Score=50.05 Aligned_cols=33 Identities=12% Similarity=0.377 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
+.+|.|||.|..|...|..|+ +.|++|+++++.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La-~~G~~V~v~~r~ 47 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIE-SRGYTVSIFNRS 47 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHH-TTTCCEEEECSS
T ss_pred CCeEEEEccHHHHHHHHHHHH-hCCCeEEEEeCC
Confidence 467999999999999999998 599999999986
No 340
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.72 E-value=0.18 Score=48.90 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|+|||+|.+|..+|..|. ..|.+|+++|+.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~-~lGa~V~v~D~~ 216 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAK-RLGAKTTGYDVR 216 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHH-HHTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 467999999999999999986 689999999986
No 341
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.69 E-value=0.18 Score=47.98 Aligned_cols=33 Identities=24% Similarity=0.524 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|.|||.|..|...|..|+ +.|++|+++++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~-~~G~~V~~~dr~ 63 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLC-EAGYALQVWNRT 63 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHH-HTTCEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHH-hCCCeEEEEcCC
Confidence 357999999999999999998 599999999986
No 342
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.68 E-value=0.17 Score=48.94 Aligned_cols=34 Identities=38% Similarity=0.639 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~~ 115 (495)
+.+|+|+|||.+|..+|..|. ..|. +|+++|+..
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~-~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLL-AAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHH-HHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHH-HcCCCeEEEEECCC
Confidence 568999999999999999997 4898 999999863
No 343
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=90.68 E-value=0.18 Score=47.92 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|.+|+-+|..|+ +.|.+|+++++..
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~-~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLL-DTARRITLIHRRP 185 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTT-TTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHH-hhCCEEEEEEcCC
Confidence 357999999999999999997 5899999999863
No 344
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.65 E-value=0.25 Score=46.77 Aligned_cols=33 Identities=27% Similarity=0.417 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
...|.|||.|.+|.+.|..|+ +.|+ +|+++|+.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~-~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLR-RSGFKGKIYGYDIN 67 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHH-HTTCCSEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHH-hCCCCCEEEEEECC
Confidence 357999999999999999997 5899 99999986
No 345
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.62 E-value=0.14 Score=48.37 Aligned_cols=31 Identities=19% Similarity=0.357 Sum_probs=28.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhcC-----C-ccEEEEcC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGS-----D-LSVAVVDK 113 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~-----G-~~V~liE~ 113 (495)
.+|.|||+|..|...|..|++ . | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~-~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLAL-RAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-HHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHh-CccccCCCCCEEEEEc
Confidence 479999999999999999984 7 8 99999987
No 346
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=90.58 E-value=0.16 Score=51.08 Aligned_cols=33 Identities=12% Similarity=0.058 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||+|.+|+-+|..|+ +.|.+|+|++++
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~-~~g~~V~li~~~ 229 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCY-KYGAKKLISCYR 229 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHH-HTTCSEEEEECS
T ss_pred CCEEEEEcCCCCHHHHHHHHH-HhCCeEEEEEEC
Confidence 467999999999999999998 599999999975
No 347
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.58 E-value=0.22 Score=48.18 Aligned_cols=33 Identities=24% Similarity=0.382 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|.|||.|..|...|..|+ +.|++|+++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~-~~G~~V~v~dr~ 54 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLR-KGGHECVVYDLN 54 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSC
T ss_pred CCEEEEECchHHHHHHHHHHH-hCCCEEEEEeCC
Confidence 467999999999999999998 599999999986
No 348
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=90.52 E-value=0.16 Score=53.88 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.|||+|..|..+|..|+ +.|++|+++|+.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la-~aG~~V~l~D~~ 346 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSA-SKGTPILMKDIN 346 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHH-HTTCCEEEECSS
T ss_pred CEEEEECCChhhHHHHHHHH-hCCCEEEEEECC
Confidence 46999999999999999998 599999999986
No 349
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.51 E-value=0.27 Score=46.72 Aligned_cols=33 Identities=30% Similarity=0.482 Sum_probs=29.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
..+|+|||+|-.|.++|+.|++ .|+ +|+|+|..
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~-~~~~~v~L~Di~ 40 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGL-KELGDVVLFDIA 40 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCeEEEEeCC
Confidence 3579999999999999999984 788 99999985
No 350
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=90.45 E-value=0.24 Score=50.14 Aligned_cols=33 Identities=15% Similarity=0.332 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|.|||.|..|...|..|+ +.|++|+++++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La-~~G~~V~v~dr~ 42 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAA-DHGFTVCAYNRT 42 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHH-HTTCCEEEECSS
T ss_pred CCCEEEEeeHHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 467999999999999999998 599999999985
No 351
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.42 E-value=0.23 Score=47.27 Aligned_cols=33 Identities=30% Similarity=0.485 Sum_probs=28.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
...|+|||+|.+|.++|+.|++ .|. +|+|+|..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~-~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALIN-QGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCceEEEEecc
Confidence 3579999999999999999984 776 89999975
No 352
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=90.37 E-value=0.21 Score=50.40 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~-~~g~~Vtlv~~~ 219 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILS-ALGSKTSLMIRH 219 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSS
T ss_pred CccEEEECCCHHHHHHHHHHH-HcCCeEEEEEeC
Confidence 357999999999999999997 599999999985
No 353
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=90.37 E-value=0.22 Score=49.06 Aligned_cols=34 Identities=38% Similarity=0.540 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|.+|+-+|..|+ +.|.+|+++++..
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~-~~g~~Vtvv~~~~ 175 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATAR-AKGLEVDVVELAP 175 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-hCCCEEEEEeCCC
Confidence 357999999999999999997 5999999999864
No 354
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=90.36 E-value=0.21 Score=51.54 Aligned_cols=33 Identities=18% Similarity=0.379 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+|+|||||.+|+-+|..|+ +.|.+|+++++..
T Consensus 152 ~~vvViGgG~~g~e~A~~l~-~~g~~Vtlv~~~~ 184 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLH-HLGIKTTLLELAD 184 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHH-HTTCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHH-hcCCcEEEEEcCC
Confidence 47999999999999999997 5999999999864
No 355
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=90.36 E-value=0.21 Score=47.17 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|.+|+-+|..|+ +.|.+|+++++..
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~-~~g~~V~~i~~~~ 188 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMS-EYVKNVTIIEYMP 188 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHT-TTBSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-hhCCcEEEEEcCC
Confidence 357999999999999999997 5899999999853
No 356
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=90.35 E-value=0.21 Score=50.98 Aligned_cols=32 Identities=28% Similarity=0.399 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+++|||||.+|+-+|..|+ +.|.+|+|+++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~-~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLA-GIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHH-HTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHH-HcCCeEEEEecc
Confidence 46999999999999999997 589999999974
No 357
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=90.28 E-value=0.23 Score=49.91 Aligned_cols=34 Identities=32% Similarity=0.494 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+++..
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~-~~g~~Vtlv~~~~ 205 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFR-LMGVQTHIIEMLD 205 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-HcCCEEEEEEeCC
Confidence 357999999999999999997 5999999999863
No 358
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=90.27 E-value=0.19 Score=49.43 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=27.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVD 112 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE 112 (495)
.+|+|||+|..|.+.|..|++..|.+|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 3699999999999999999732599999999
No 359
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=90.25 E-value=0.19 Score=47.81 Aligned_cols=31 Identities=26% Similarity=0.398 Sum_probs=28.3
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
.|+|||+|-+|.+.|..|+ +.|+ +|+++|+.
T Consensus 2 kI~VIGaG~~G~~la~~l~-~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALL-MKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHH-hCCCCCeEEEEeCC
Confidence 4899999999999999998 4888 99999986
No 360
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.23 E-value=0.26 Score=45.56 Aligned_cols=32 Identities=25% Similarity=0.458 Sum_probs=28.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|+|+|+|-+|.++|+.|+ +.|.+|+|++|.
T Consensus 120 k~vlViGaGg~g~a~a~~L~-~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLL-SLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHH-HcCCEEEEEECC
Confidence 56999999999999999998 589999999874
No 361
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=90.22 E-value=0.22 Score=49.21 Aligned_cols=34 Identities=26% Similarity=0.474 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|..|+-+|..|+ +.|.+|+++++..
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~-~~g~~Vtvv~~~~ 185 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLT-KFGVNVTLLEALP 185 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-hcCCeEEEEecCC
Confidence 457999999999999999997 5999999999864
No 362
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=90.22 E-value=0.17 Score=47.25 Aligned_cols=31 Identities=26% Similarity=0.431 Sum_probs=28.8
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
+|.|||.|..|...|..|+ +.|++|+++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~-~~G~~V~~~dr~ 33 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLV-RAGFDVTVWNRN 33 (287)
T ss_dssp CEEEECCSTTHHHHHHHHH-HHTCCEEEECSS
T ss_pred eEEEEccCHHHHHHHHHHH-HCCCeEEEEcCC
Confidence 5999999999999999998 589999999986
No 363
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.18 E-value=0.2 Score=47.18 Aligned_cols=33 Identities=12% Similarity=0.363 Sum_probs=29.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~~ 115 (495)
..|+|||||-+|.++|+.|+. .|+ .|+|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~-~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISA-KGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHh-cCCCCEEEEEcCCc
Confidence 579999999999999999984 788 999999864
No 364
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=90.18 E-value=0.2 Score=47.17 Aligned_cols=32 Identities=31% Similarity=0.471 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.|||+|..|...|..|+ +.|++|+++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~-~~G~~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLL-KAGYLLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HTTCEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHH-hCCCeEEEEcCC
Confidence 46999999999999999998 599999999986
No 365
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=90.06 E-value=0.23 Score=50.20 Aligned_cols=32 Identities=25% Similarity=0.362 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+++|||||.+|+-+|..|+ +.|.+|+|+++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~-~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLT-GIGLDTTVMMRS 217 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHH-HTTCCEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHH-HcCCceEEEEcC
Confidence 46999999999999999998 599999999975
No 366
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=90.04 E-value=0.35 Score=45.92 Aligned_cols=33 Identities=30% Similarity=0.527 Sum_probs=29.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
...|+|||+|.+|.++|+.|+. .|+ .|+|+|..
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~-~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLM-KDLADEVALVDVM 55 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHH-HCCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCCeEEEEECC
Confidence 4679999999999999999984 777 89999975
No 367
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.97 E-value=0.21 Score=48.21 Aligned_cols=33 Identities=30% Similarity=0.515 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
...|+|+|||.+|..+|..|. ..|. +|+|+|+.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~-~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLL-DLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHH-hCCCCeEEEEECC
Confidence 578999999999999999997 4787 89999986
No 368
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=89.94 E-value=0.31 Score=45.71 Aligned_cols=32 Identities=28% Similarity=0.545 Sum_probs=29.2
Q ss_pred ccEEEEC-CCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIG-AGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIG-aGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.||| +|..|.+.|..|+ +.|++|+++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~-~~G~~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLR-ASGYPISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHH-TTTCCEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHH-hCCCeEEEEECC
Confidence 4699999 9999999999997 599999999975
No 369
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=89.91 E-value=0.22 Score=46.69 Aligned_cols=33 Identities=27% Similarity=0.447 Sum_probs=29.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|.|||+|..|...|..|+ +.|++|+++++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~-~~g~~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLL-KEGVTVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHH-HTTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHH-HCCCeEEEEeCC
Confidence 356999999999999999998 489999999985
No 370
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=89.88 E-value=0.19 Score=50.99 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhcC---CccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGS---DLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~---G~~V~liE~~~ 115 (495)
.+++|||||.+|+-+|..|+ +. |.+|+|+|+..
T Consensus 192 ~~vvViGgG~ig~E~A~~l~-~~~~~g~~Vtlv~~~~ 227 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFN-AYKPPGGKVTLCYRNN 227 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHH-HHCCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHH-hhCCCCCeEEEEEcCC
Confidence 57999999999999999997 47 99999999864
No 371
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=89.81 E-value=0.24 Score=49.52 Aligned_cols=34 Identities=29% Similarity=0.417 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+++|||+|.+|+-+|..|+ +.|.+|+|+++..
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~-~~g~~Vtlv~~~~ 180 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLV-KMKKTVHVFESLE 180 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCeEEEEEccC
Confidence 357999999999999999997 5999999999864
No 372
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=89.77 E-value=0.32 Score=46.10 Aligned_cols=33 Identities=27% Similarity=0.466 Sum_probs=29.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
..+|+|||+|-+|.++|+.|+. .|. +|+|+|..
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~-~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMAL-RQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-TTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCC
Confidence 3679999999999999999985 777 89999975
No 373
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=89.71 E-value=0.19 Score=50.52 Aligned_cols=32 Identities=28% Similarity=0.373 Sum_probs=29.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhcC--CccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGS--DLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~--G~~V~liE~~ 114 (495)
..|.|||.|.+|+.+|..|++ . |++|+++|++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~-~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAH-MCPEIRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-HCTTSEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHh-cCCCCEEEEEECC
Confidence 479999999999999999985 6 8999999985
No 374
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.68 E-value=0.31 Score=44.89 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...++|||+|-+|.++|+.|+ +.|.+|+|+.|.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~-~~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELK-KQGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 457999999999999999998 488999999886
No 375
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=89.64 E-value=0.36 Score=45.69 Aligned_cols=32 Identities=25% Similarity=0.416 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.|||+|..|...|..|+ +.|++|+++++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~-~~g~~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLL-KMGHTVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHH-HTTCCEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHH-hCCCEEEEEeCC
Confidence 57999999999999999998 589999999986
No 376
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=89.63 E-value=0.21 Score=50.68 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcC---CccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGS---DLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~---G~~V~liE~~~ 115 (495)
..+++|||||.+|+-+|..|+ +. |.+|+|+|+..
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~-~~~~~g~~Vtlv~~~~ 223 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFN-AYKARGGQVDLAYRGD 223 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHH-HHSCTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-hhccCcCeEEEEEcCC
Confidence 357999999999999999997 47 99999999864
No 377
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.61 E-value=0.28 Score=45.48 Aligned_cols=32 Identities=13% Similarity=0.179 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|+|+|||..|..++.+|+ ++|++|+++.+.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~-~~g~~V~~~~r~ 37 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALA-PQGWRIIGTSRN 37 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHG-GGTCEEEEEESC
T ss_pred CcEEEECCcHHHHHHHHHHH-HCCCEEEEEEcC
Confidence 56999999999999999997 589999999985
No 378
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.53 E-value=0.36 Score=45.80 Aligned_cols=32 Identities=34% Similarity=0.530 Sum_probs=28.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
..|+|||+|.+|.++|+.|++ .|+ +|+|+|..
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~-~~~~~v~l~Di~ 38 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALI-KQLGDVVLFDIA 38 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCceEEEEeCC
Confidence 579999999999999999984 777 99999985
No 379
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=89.50 E-value=0.36 Score=46.24 Aligned_cols=32 Identities=31% Similarity=0.435 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.|||.|.+|.+.|..|. +.|++|+++|++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~-~~G~~V~~~dr~ 40 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLH-AANHSVFGYNRS 40 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHH-HTTCCEEEECSC
T ss_pred CEEEEEeecHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 46999999999999999997 589999999986
No 380
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=89.49 E-value=0.36 Score=45.32 Aligned_cols=33 Identities=21% Similarity=0.289 Sum_probs=29.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
...|+|||+|-+|.++|+.|+ +.|. +|+|++|.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~-~~G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLL-STAAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-TTTCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHH-HCCCCEEEEEeCC
Confidence 356999999999999999998 5897 99999885
No 381
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=89.45 E-value=0.24 Score=46.83 Aligned_cols=31 Identities=26% Similarity=0.415 Sum_probs=28.0
Q ss_pred cEEEECCCHHHHHHHHHHHhcCC--ccEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSD--LSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G--~~V~liE~~ 114 (495)
.|+|||+|-.|.++|..|++ .| .+|+++|+.
T Consensus 3 kI~VIGaG~~G~~la~~L~~-~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIA-QGVADDYVFIDAN 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCCCEEEEEcCC
Confidence 59999999999999999984 78 689999985
No 382
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.41 E-value=0.2 Score=44.72 Aligned_cols=32 Identities=25% Similarity=0.432 Sum_probs=28.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEE-EcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAV-VDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~l-iE~~ 114 (495)
..|.|||+|-.|.+.|..|+ +.|++|++ ++++
T Consensus 24 mkI~IIG~G~mG~~la~~l~-~~g~~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFT-AAQIPAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHH-HTTCCEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCEEEEEECCC
Confidence 57999999999999999998 58999998 7764
No 383
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.37 E-value=0.31 Score=45.15 Aligned_cols=31 Identities=23% Similarity=0.386 Sum_probs=28.2
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.|.|||+|-.|.+.|..|+ +.|++|++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~-~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLR-RRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHH-HTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHH-HCCCEEEEEECC
Confidence 4899999999999999997 589999999875
No 384
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=89.34 E-value=0.28 Score=50.15 Aligned_cols=33 Identities=6% Similarity=0.123 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+++|||||.+|+-+|..|+ +.|.+|+|+|+..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~-~~G~~Vtlv~~~~ 247 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFN-ATGRRTVMLVRTE 247 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHH-HcCCeEEEEEecC
Confidence 67999999999999999997 5999999999864
No 385
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.26 E-value=0.39 Score=43.63 Aligned_cols=32 Identities=16% Similarity=0.390 Sum_probs=28.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCc----cEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDL----SVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~----~V~liE~~ 114 (495)
..|.|||+|..|.+.|..|+ +.|+ +|++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~-~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMI-NKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HTTSSCGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHH-hCCCCCCCeEEEEeCC
Confidence 46999999999999999998 5898 99999985
No 386
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=89.26 E-value=0.35 Score=46.00 Aligned_cols=33 Identities=30% Similarity=0.644 Sum_probs=29.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
...|+|||+|-+|.++|+.|+. +|. .++|+|..
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~-~~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILM-KDLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHH-TTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCceEEEEeCC
Confidence 4679999999999999999985 787 89999975
No 387
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=89.21 E-value=0.3 Score=46.53 Aligned_cols=33 Identities=21% Similarity=0.176 Sum_probs=28.6
Q ss_pred ccEEEECCCHHHHH-HHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLT-IARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls-~A~~La~~~G~~V~liE~~~ 115 (495)
.+|.|||.|.+|.+ +|..|. ++|++|++.|+..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~-~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAK-EAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHH-HTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHH-hCCCEEEEEcCCC
Confidence 56999999999997 788776 6999999999863
No 388
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=89.17 E-value=0.26 Score=46.13 Aligned_cols=31 Identities=32% Similarity=0.360 Sum_probs=27.9
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
+|+|||+|-.|.++|+.|++ .|. +|+|+|..
T Consensus 2 kI~ViGaG~vG~~la~~l~~-~~~~~~v~L~D~~ 34 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLL-NLDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HSCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCCCeEEEEECC
Confidence 58999999999999999984 777 89999985
No 389
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=89.11 E-value=0.27 Score=45.09 Aligned_cols=31 Identities=16% Similarity=0.388 Sum_probs=28.1
Q ss_pred cEEEECCCHHHHHHHHHHHhcCC-ccEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSD-LSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G-~~V~liE~~ 114 (495)
.|.|||+|-.|.+.|..|+ +.| .+|+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~-~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLV-KQGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHH-HHCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHH-HCCCCeEEEECCC
Confidence 4899999999999999998 489 999999975
No 390
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=89.07 E-value=0.25 Score=46.78 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
...|.|||.|..|...|..|+ +.|+ +|+++++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~-~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLR-QAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHH-HHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHH-HCCCCeEEEEcCC
Confidence 357999999999999999998 5899 99999985
No 391
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=89.01 E-value=0.35 Score=48.83 Aligned_cols=32 Identities=16% Similarity=0.405 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+|.|||+|..|...|..|+ +.|++|+++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La-~~G~~V~v~dr~ 34 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMN-DHGFVVCAFNRT 34 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHH-HTTCCEEEECSS
T ss_pred CeEEEEChHHHHHHHHHHHH-HCCCeEEEEeCC
Confidence 46999999999999999998 599999999985
No 392
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=88.98 E-value=0.37 Score=48.43 Aligned_cols=33 Identities=15% Similarity=0.393 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|.|||.|..|...|..|+ +.|++|+++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~-~~G~~V~v~dr~ 36 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMN-DHGFVVCAFNRT 36 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHH-HTTCCEEEECSS
T ss_pred CCEEEEEChhHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 357999999999999999998 599999999986
No 393
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=88.80 E-value=0.38 Score=44.58 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
...++|||+|-+|.++|+.|+ +.|. +|+|+.|.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~-~~G~~~v~v~~R~ 150 (277)
T 3don_A 117 DAYILILGAGGASKGIANELY-KIVRPTLTVANRT 150 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHH-TTCCSCCEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHH-HCCCCEEEEEeCC
Confidence 457999999999999999998 5898 89999986
No 394
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=88.76 E-value=0.22 Score=50.33 Aligned_cols=32 Identities=28% Similarity=0.429 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhcC--CccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGS--DLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~--G~~V~liE~~ 114 (495)
..|.|||.|..|+.+|..|++ . |++|+++|++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~-~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAH-KCPHITVTVVDMN 43 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-HCTTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHh-cCCCCEEEEEECC
Confidence 479999999999999999985 5 7999999975
No 395
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=88.75 E-value=0.29 Score=45.85 Aligned_cols=32 Identities=34% Similarity=0.583 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.|||+|..|...|..|+ +.|++|+++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~-~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLL-KAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HTTCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHH-hCCCEEEEEeCC
Confidence 46999999999999999998 589999999985
No 396
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=88.71 E-value=0.12 Score=46.57 Aligned_cols=33 Identities=21% Similarity=0.197 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|.|||.|..|.+.|..|. +.|++|+++++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~-~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLD-SVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHH-HTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHH-HCCCEEEEecCH
Confidence 357999999999999999997 589999999984
No 397
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=88.69 E-value=0.37 Score=42.65 Aligned_cols=31 Identities=23% Similarity=0.300 Sum_probs=28.2
Q ss_pred cEEEECC-CHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 83 DVIIIGA-GIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGa-GiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.|+|+|| |..|..++..|+ ++|++|+++.|.
T Consensus 2 kilVtGatG~iG~~l~~~L~-~~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEAR-RRGHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHH-HCCCEEEEEEec
Confidence 3899998 999999999998 489999999885
No 398
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.60 E-value=0.39 Score=44.80 Aligned_cols=31 Identities=19% Similarity=0.402 Sum_probs=27.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..++|+|+|-+|.++|+.|+ +.| +|+|+++.
T Consensus 129 k~vlV~GaGgiG~aia~~L~-~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELA-KDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHT-SSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHH-HCC-CEEEEECC
Confidence 56999999999999999998 589 99999874
No 399
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.58 E-value=0.25 Score=44.44 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=28.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|-.|..+|..|. +.|+ |+++|++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~-~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELR-GSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHST-TSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHH-hCCe-EEEEECCH
Confidence 457999999999999999996 5899 99999863
No 400
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=88.58 E-value=0.28 Score=45.37 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=29.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|+|||+|-+|.++|+.|+ +.|.+|+|++|.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~-~~G~~v~v~~R~ 151 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLL-QAQQNIVLANRT 151 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHH-HTTCEEEEEESS
T ss_pred CCEEEEECCcHHHHHHHHHHH-HCCCEEEEEECC
Confidence 356999999999999999998 488999999885
No 401
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=88.57 E-value=0.37 Score=48.57 Aligned_cols=31 Identities=29% Similarity=0.584 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
+|.|||+|..|...|..|+ +.|++|+++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La-~~G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIA-EKGFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHH-HTTCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 5999999999999999998 599999999985
No 402
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.57 E-value=0.4 Score=45.39 Aligned_cols=33 Identities=24% Similarity=0.512 Sum_probs=28.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
...|+|||+|.+|.+.|+.|+. .|. +|+++|.+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~-~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMN-QGIADEIVLIDAN 40 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHh-CCCCCEEEEEeCC
Confidence 3579999999999999999974 564 79999975
No 403
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.57 E-value=0.39 Score=42.38 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=28.0
Q ss_pred cEEEECC-CHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 83 DVIIIGA-GIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGa-GiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.|+|+|| |.+|..++..|+ ++|++|+++.|+
T Consensus 2 kvlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAK-NRGHEVTAIVRN 33 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESC
T ss_pred eEEEEcCCchhHHHHHHHHH-hCCCEEEEEEcC
Confidence 4899996 999999999998 589999999985
No 404
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=88.52 E-value=0.43 Score=44.20 Aligned_cols=33 Identities=27% Similarity=0.478 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..|+|+|+|..|..++..|+ ++|++|+++.+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~-~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLT-AQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHH-HCCCEEEEEeCCc
Confidence 46999999999999999998 5899999999863
No 405
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=88.48 E-value=0.35 Score=45.71 Aligned_cols=31 Identities=39% Similarity=0.566 Sum_probs=27.6
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
.|+|||+|.+|.++|+.|++ .|. +|+|+|..
T Consensus 2 kv~ViGaG~vG~~~a~~l~~-~~~~~el~l~D~~ 34 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVAR-QDVAKEVVMVDIK 34 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HTCSSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCc
Confidence 48999999999999999984 676 89999985
No 406
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=88.46 E-value=0.29 Score=48.42 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
....|||.|..|+.+|..|+ +.|++|+++|++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La-~~G~~V~~~D~~ 43 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFA-KHGVDVLGVDIN 43 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HTTCEEEEECSC
T ss_pred CccEEEeeCHHHHHHHHHHH-HCCCEEEEEECC
Confidence 45789999999999999999 499999999986
No 407
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=88.39 E-value=0.25 Score=48.08 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCC-------ccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSD-------LSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G-------~~V~liE~~ 114 (495)
..|.|||+|..|.+.|..|+ +.| .+|+++++.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~-~~G~~~~~~~~~V~~~~r~ 60 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVG-TNAKNNYLFENEVRMWIRD 60 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHH-HHHHHCTTBCSCEEEECCS
T ss_pred CEEEEECcCHHHHHHHHHHH-HcCCccCCCCCeEEEEECC
Confidence 46999999999999999998 488 999999985
No 408
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.29 E-value=0.36 Score=46.68 Aligned_cols=32 Identities=28% Similarity=0.501 Sum_probs=28.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|+|+|+|.+|..++..|. ..|.+|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~-~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAV-GLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCEEEEEeCC
Confidence 57999999999999999986 589999999874
No 409
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.28 E-value=0.39 Score=44.73 Aligned_cols=32 Identities=31% Similarity=0.490 Sum_probs=29.2
Q ss_pred ccEEEECC-CHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGA-GIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGa-GiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.|||+ |-.|.+.|..|+ +.|++|+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~-~~g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIH-DSAHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HSSSEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHH-hCCCEEEEEECC
Confidence 46999999 999999999997 589999999985
No 410
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=88.27 E-value=0.41 Score=48.00 Aligned_cols=36 Identities=33% Similarity=0.507 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHh-------------------cCCc-cEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLV-------------------GSDL-SVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~-------------------~~G~-~V~liE~~~~ 116 (495)
..+|+|||+|.+|+-+|..|++ +.|. +|+|++++..
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 3579999999999999999973 3677 7999998643
No 411
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=88.24 E-value=0.38 Score=43.93 Aligned_cols=35 Identities=29% Similarity=0.392 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~~~ 116 (495)
..+|+|||+|-.|..+|..|+ ..|. +++|+|.+..
T Consensus 28 ~~~VlvvG~GglG~~va~~La-~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLA-GAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHH-HTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHH-HcCCCeEEEEeCCCc
Confidence 467999999999999999998 5886 7899998744
No 412
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=88.24 E-value=0.45 Score=45.20 Aligned_cols=32 Identities=19% Similarity=0.331 Sum_probs=28.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCC----ccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSD----LSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G----~~V~liE~~ 114 (495)
..|.|||+|..|.+.|..|+ +.| ++|+++++.
T Consensus 23 mkI~iIG~G~mG~ala~~L~-~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFT-AAGVLAAHKIMASSPD 58 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHH-HTTSSCGGGEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHH-HCCCCCcceEEEECCC
Confidence 57999999999999999998 588 899999885
No 413
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=88.23 E-value=0.45 Score=45.25 Aligned_cols=35 Identities=26% Similarity=0.514 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~~~ 116 (495)
..+|+|||+|-.|+.+|..|+ ..|. +++|+|.+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La-~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALI-AWGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCCEEEEecCCEe
Confidence 578999999999999999999 4886 7999998754
No 414
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=88.23 E-value=0.36 Score=45.03 Aligned_cols=35 Identities=29% Similarity=0.382 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~~~ 116 (495)
..+|+|||+|-.|+.+|..|+ +.|. +++|+|.+.+
T Consensus 36 ~~~VlVvGaGGlGs~va~~La-~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLT-RCGIGKLLLFDYDKV 71 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCBC
T ss_pred CCeEEEECcCHHHHHHHHHHH-HcCCCEEEEECCCcc
Confidence 578999999999999999999 4885 8999998744
No 415
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=88.19 E-value=0.53 Score=47.84 Aligned_cols=52 Identities=13% Similarity=0.173 Sum_probs=37.8
Q ss_pred ceeEEecCceeEEEEecCCCcEEEEEcC--CC-----eeeecCeEEEccCcc-hHHHHHH
Q 011027 255 RYAEFYHDPVTCLLRSNSTGEVEAVQTS--KN-----TLYSKKAIVVAAGCW-SGSLMHD 306 (495)
Q Consensus 255 ~~~~~~~~~V~~l~~~~~~~~~~~v~~~--~g-----~~~~a~~VV~A~G~~-s~~l~~~ 306 (495)
|+++++++.|++|..++++.++++|+.. +| ..+.|+.||+|+|++ +..|+..
T Consensus 241 n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~ 300 (507)
T 1coy_A 241 KLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVS 300 (507)
T ss_dssp CEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred CcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHHh
Confidence 4899999999999886312267888763 45 245568999999997 6666554
No 416
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.18 E-value=0.42 Score=46.92 Aligned_cols=33 Identities=27% Similarity=0.351 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|+|||+|.+|+.+|..|. ..|.+|+++|+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~-~~Ga~V~v~D~~ 204 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAAN-SLGAIVRAFDTR 204 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHH-HCCCEEEEEcCC
Confidence 357999999999999999885 699999999986
No 417
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=88.17 E-value=0.41 Score=45.72 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=29.4
Q ss_pred cccEEEECC-CHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGA-GIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGa-GiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
...|+|.|| |..|..++..|+ ++|++|+++++..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~-~~G~~V~~~~r~~ 53 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALR-TQGRTVRGFDLRP 53 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHH-HTTCCEEEEESSC
T ss_pred CCEEEEECCCChHHHHHHHHHH-hCCCEEEEEeCCC
Confidence 467999998 999999999998 5899999999864
No 418
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=88.17 E-value=0.41 Score=45.10 Aligned_cols=33 Identities=27% Similarity=0.310 Sum_probs=29.2
Q ss_pred cccEEEECCC-HHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAG-IIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaG-iaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||+| ++|..+|..|+ +.|.+|+++++.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~-~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLA-NDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHH-TTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHH-HCCCEEEEEeCc
Confidence 4689999999 78999999997 599999999875
No 419
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=88.14 E-value=0.37 Score=45.02 Aligned_cols=31 Identities=26% Similarity=0.420 Sum_probs=28.4
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
+|.|||+|..|...|..|+ +.|++|+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~-~~g~~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLM-KHGYPLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHH-HTTCCEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 4899999999999999998 589999999985
No 420
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=88.12 E-value=0.29 Score=50.06 Aligned_cols=33 Identities=27% Similarity=0.318 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||||.+|+-+|..|+ +.|.+|+|+++.
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~-~~g~~Vtlv~~~ 387 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLA-GIVEHVTLLEFA 387 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHH-HHBSEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-hhCCEEEEEEeC
Confidence 357999999999999999998 589999999975
No 421
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.12 E-value=0.41 Score=45.48 Aligned_cols=33 Identities=24% Similarity=0.549 Sum_probs=28.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
...|+|||+|-+|.++|+.|++ .|. +++|+|..
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~-~~~~~el~l~D~~ 43 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVL-QGIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCCeEEEEeCC
Confidence 3579999999999999999984 676 89999974
No 422
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.02 E-value=0.41 Score=43.82 Aligned_cols=33 Identities=12% Similarity=0.227 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCC----ccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSD----LSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G----~~V~liE~~~ 115 (495)
..|.|||+|..|.+.|..|+ +.| .+|+++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~-~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIA-NANIIKKENLFYYGPSK 41 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHH-HHTSSCGGGEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHH-HCCCCCCCeEEEEeCCc
Confidence 46999999999999999997 478 7999999863
No 423
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.00 E-value=0.44 Score=44.18 Aligned_cols=31 Identities=29% Similarity=0.478 Sum_probs=28.1
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
.|.|||+|..|.+.|..|+ +.|+ +|+++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~-~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLR-RSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHH-HTTCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHH-hcCCCcEEEEEeCC
Confidence 4899999999999999997 5888 89999985
No 424
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=87.98 E-value=0.48 Score=45.34 Aligned_cols=33 Identities=27% Similarity=0.485 Sum_probs=28.4
Q ss_pred cccEEEECC-CHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 81 TFDVIIIGA-GIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGa-GiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
...|+|||+ |-+|.++|+.|+. .|. +|+|+|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~-~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAM-MRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHH-TTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHh-cCCCCEEEEEeCC
Confidence 357999997 9999999999984 774 89999975
No 425
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=87.97 E-value=0.24 Score=47.67 Aligned_cols=33 Identities=24% Similarity=0.141 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCC-------ccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSD-------LSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G-------~~V~liE~~~ 115 (495)
..|.|||+|..|.+.|..|++ .| .+|+++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~-~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGG-NAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-HHHHCTTEEEEEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHh-cCCcccCCCCeEEEEEcCh
Confidence 469999999999999999984 78 8999999863
No 426
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=87.88 E-value=0.44 Score=42.30 Aligned_cols=33 Identities=24% Similarity=0.480 Sum_probs=29.5
Q ss_pred ccEEEECC-CHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGA-GIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGa-GiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..|+|+|| |..|..++.+|+ ++|++|+++.|..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~-~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEAL-NRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHH-TTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHH-HCCCEEEEEEcCc
Confidence 46999995 999999999998 5999999999963
No 427
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=87.84 E-value=0.57 Score=43.50 Aligned_cols=32 Identities=19% Similarity=0.409 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCc---cEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDL---SVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~---~V~liE~~ 114 (495)
..|.|||+|-.|.+.|..|+ +.|+ +|++++++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~-~~g~~~~~V~v~dr~ 38 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLI-ANGYDPNRICVTNRS 38 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHH-HTTCCGGGEEEECSS
T ss_pred CEEEEEcccHHHHHHHHHHH-HCCCCCCeEEEEeCC
Confidence 56999999999999999998 5888 99999985
No 428
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=87.83 E-value=0.41 Score=44.47 Aligned_cols=30 Identities=27% Similarity=0.468 Sum_probs=27.6
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.|.|||+|..|...|..|+ + |++|+++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~-~-g~~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLA-R-RFPTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHH-T-TSCEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHh-C-CCeEEEEeCC
Confidence 5999999999999999997 6 9999999975
No 429
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=87.72 E-value=1.2 Score=43.17 Aligned_cols=51 Identities=16% Similarity=0.066 Sum_probs=38.5
Q ss_pred eecHHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 233 QLDAMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 233 ~~~p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
.+....+.+.|.+.+.+.| ++++++++|+++... ....+|.||.|.|.++.
T Consensus 94 ~~~r~~l~~~L~~~~~~~g----v~i~~~~~v~~i~~~--------------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 94 GVERRGLVHALRDKCRSQG----IAIRFESPLLEHGEL--------------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp EEEHHHHHHHHHHHHHHTT----CEEETTCCCCSGGGC--------------CGGGCSEEEECCGGGGG
T ss_pred eecHHHHHHHHHHHHHHCC----CEEEeCCEeccchhc--------------ccccCCEEEECCCCCch
Confidence 3556778899988888765 689999999887421 01357999999999875
No 430
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=87.66 E-value=0.45 Score=47.66 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=29.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~~ 115 (495)
..+|+|||||.+|+-+|..|. +.|. +|+|++++.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~-r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAI-RQGATSVKCLYRRD 298 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHH-HTTCSEEEEECSSC
T ss_pred CCEEEEECCChhHHHHHHHHH-HcCCCEEEEEEeCC
Confidence 467999999999999999987 4787 599999863
No 431
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.65 E-value=0.46 Score=46.08 Aligned_cols=33 Identities=30% Similarity=0.534 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|+|||+|.+|..+|..|. ..|.+|+++|+.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~-~~Ga~V~~~d~~ 198 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIAL-GMGAQVTILDVN 198 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCEEEEEECC
Confidence 357999999999999999996 599999999975
No 432
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=87.59 E-value=0.51 Score=43.07 Aligned_cols=31 Identities=26% Similarity=0.439 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
.++|||+|-+|.++++.|+ +.|. +|+|++|.
T Consensus 110 ~vliiGaGg~a~ai~~~L~-~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALL-QMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHH-HTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHH-HcCCCEEEEEeCC
Confidence 7999999999999999998 5898 89999985
No 433
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.55 E-value=0.49 Score=47.62 Aligned_cols=32 Identities=16% Similarity=0.375 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+|.|||+|..|...|..|+ +.|++|+++++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~-~~G~~V~v~dr~ 37 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVE-SRGYTVAIYNRT 37 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHH-HTTCCEEEECSS
T ss_pred CcEEEEeeHHHHHHHHHHHH-hCCCEEEEEcCC
Confidence 57999999999999999998 589999999985
No 434
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=87.47 E-value=0.4 Score=48.20 Aligned_cols=34 Identities=29% Similarity=0.495 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcC-CccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGS-DLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~-G~~V~liE~~~ 115 (495)
..+|+|||+|.+|+-+|..|+ +. |.+|+++++..
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~-~~~g~~Vtlv~~~~ 193 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLA-DMWGIDTTVVELAD 193 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HHHCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHH-HhcCCcEEEEEccC
Confidence 357999999999999999997 58 99999999863
No 435
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=87.45 E-value=0.4 Score=44.44 Aligned_cols=33 Identities=15% Similarity=0.278 Sum_probs=29.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|+|||+|-+|.++|+.|+ +.|.+|+++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~-~~g~~V~v~~r~ 161 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALV-KEGAKVFLWNRT 161 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHH-HHTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHH-HcCCEEEEEECC
Confidence 357999999999999999997 478899999985
No 436
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=87.16 E-value=0.41 Score=44.35 Aligned_cols=32 Identities=13% Similarity=0.016 Sum_probs=28.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||+|..|+-+|..|+ +.| +|+++++.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~-~~g-~v~~v~~~ 172 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLP-DWG-ETTFFTNG 172 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGG-GTS-EEEEECTT
T ss_pred CCEEEEEecCccHHHHHHHhh-hcC-cEEEEECC
Confidence 457999999999999999997 478 99999875
No 437
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=86.99 E-value=0.6 Score=43.40 Aligned_cols=33 Identities=27% Similarity=0.361 Sum_probs=28.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
...++|+|+|-+|.++|+.|+ +.|. +|+|+.|.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~-~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALV-THGVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHH-HCCCCEEEEEECC
Confidence 457999999999999999998 4898 69999875
No 438
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=86.98 E-value=0.64 Score=43.11 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=29.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
...++|||+|-+|.++|+.|+ +.|. +|+|+.|.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~-~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLL-DQQPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-TTCCSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHH-hcCCCeEEEEECC
Confidence 457999999999999999998 5896 89999874
No 439
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=86.97 E-value=0.48 Score=43.47 Aligned_cols=32 Identities=25% Similarity=0.488 Sum_probs=28.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCcc-EEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLS-VAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~-V~liE~~ 114 (495)
..|.|||+|-.|...|..|+ +.|++ |+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~-~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALY-RKGFRIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HHTCCEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHH-HCCCeEEEEEeCC
Confidence 46999999999999999998 47998 8999875
No 440
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=86.96 E-value=0.42 Score=44.86 Aligned_cols=34 Identities=24% Similarity=0.169 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+|+|||+|..|+-+|..|+ +.|.+|+++++..
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~-~~g~~v~~~~~~~ 187 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILS-SYSTKVYLIHRRD 187 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HHSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHH-HhCCeEEEEEeCC
Confidence 367999999999999999998 5899999999863
No 441
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=86.90 E-value=0.54 Score=47.14 Aligned_cols=34 Identities=18% Similarity=0.333 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+++|||+|.+|+-+|..|+ +.|.+|+++++..
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~-~~g~~Vt~v~~~~ 203 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFH-GLGVKTTLIYRGK 203 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-HcCCeEEEEEcCC
Confidence 457999999999999999997 5999999999864
No 442
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=86.87 E-value=0.54 Score=47.46 Aligned_cols=34 Identities=21% Similarity=0.446 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..+++|||+|.+|+-+|..|+ +.|.+|+++++..
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~-~~g~~Vtli~~~~ 224 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFH-GLGVKTTLLHRGD 224 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHH-HcCCeEEEEECCC
Confidence 457999999999999999997 5999999999864
No 443
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=86.84 E-value=0.58 Score=42.73 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=28.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+|.|||+|..|...|..|+ +.|.+|.++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~-~~g~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLK-QTPHELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHT-TSSCEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHH-hCCCeEEEECCC
Confidence 46999999999999999997 588999999875
No 444
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.82 E-value=0.53 Score=47.14 Aligned_cols=33 Identities=27% Similarity=0.340 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|+|||+|-+|...|..|. +.|.+|+|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~-~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLL-EAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCcCEEEEEcCC
Confidence 356999999999999999998 599999999985
No 445
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=86.80 E-value=0.5 Score=45.04 Aligned_cols=32 Identities=22% Similarity=0.286 Sum_probs=28.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||+|.+|+-+|..|+ +.| +|+++.+.
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~-~~~-~v~~v~~~ 194 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVS-TVA-ETTWITQH 194 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHT-TTS-EEEEECSS
T ss_pred CCEEEEECCCcCHHHHHHHHH-hhC-CEEEEECC
Confidence 367999999999999999997 577 69999986
No 446
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=86.77 E-value=0.59 Score=44.14 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=29.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
...++|+|+|-+|.++|+.|+ +.|. +|+|+.|.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~-~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAA-LDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHH-HTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHH-HCCCCEEEEEECC
Confidence 457999999999999999998 5898 89999874
No 447
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=86.71 E-value=0.44 Score=43.65 Aligned_cols=30 Identities=27% Similarity=0.297 Sum_probs=27.0
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCccEEEEcC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDK 113 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~~V~liE~ 113 (495)
.|.|||+|..|...|..|+ +.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~-~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLR-SRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHH-HTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHH-HCCCeEEEeCC
Confidence 4899999999999999998 58999999765
No 448
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=86.67 E-value=0.58 Score=45.65 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=29.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|+|||+|.+|+.+|..|. ..|.+|+++|+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~-~~Ga~V~~~d~~ 204 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAK-RLGAVVMATDVR 204 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeCC
Confidence 467999999999999999885 699999999975
No 449
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=86.53 E-value=0.67 Score=42.07 Aligned_cols=34 Identities=12% Similarity=0.358 Sum_probs=29.2
Q ss_pred cccEEEECC-CHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGA-GIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGa-GiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
...|+|.|| |-.|..+|.+|+ ++|++|+++++..
T Consensus 22 ~k~vlITGas~gIG~~la~~l~-~~G~~V~~~~r~~ 56 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFK-SKSWNTISIDFRE 56 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSC
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCc
Confidence 356899995 689999999998 4999999999874
No 450
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=86.53 E-value=0.66 Score=42.83 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=28.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
...++|+|+|-+|.++|+.|+ +.|. +|+|+.|.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~-~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFL-QAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHH-HTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHH-HcCCCEEEEEeCC
Confidence 467999999999999999998 4895 89999874
No 451
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=86.44 E-value=0.55 Score=44.29 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||+|..|+-+|..|+ +.|.+|+++++.
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~-~~~~~v~~~~~~ 186 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLE-PIAKEVSIIHRR 186 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHT-TTBSEEEEECSS
T ss_pred CCEEEEECCCHhHHHHHHHHH-hhCCeEEEEEec
Confidence 357999999999999999997 589999999986
No 452
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=86.44 E-value=0.39 Score=45.08 Aligned_cols=32 Identities=25% Similarity=0.430 Sum_probs=27.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.+|-+||-|..|...|..|+ +.|++|+++|+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~-~~G~~V~v~dr~ 37 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILL-EAGYELVVWNRT 37 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HTTCEEEEC---
T ss_pred CcEEEEecHHHHHHHHHHHH-HCCCeEEEEeCC
Confidence 46999999999999999998 599999999985
No 453
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=86.42 E-value=0.64 Score=44.48 Aligned_cols=32 Identities=34% Similarity=0.288 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|.|||+|..|.+.|..|+ +.|++|+++++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~-~~G~~V~~~~~~ 48 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLK-DSGVDVTVGLRS 48 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHH-HTTCCEEEECCT
T ss_pred CEEEEECchHHHHHHHHHHH-HCcCEEEEEECC
Confidence 46999999999999999997 589999999985
No 454
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=86.39 E-value=0.66 Score=42.56 Aligned_cols=31 Identities=29% Similarity=0.403 Sum_probs=28.3
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.|+|||+|-+|.+.|+.|. +.|.+|+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~-~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALR-EAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHH-HTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHH-HCCCEEEEEECC
Confidence 7999999999999999997 588899999875
No 455
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=86.37 E-value=0.52 Score=44.87 Aligned_cols=32 Identities=19% Similarity=0.426 Sum_probs=28.1
Q ss_pred ccEEEECC-CHHHHHHHHHHHhcCCc-------cEEEEcCC
Q 011027 82 FDVIIIGA-GIIGLTIARQLLVGSDL-------SVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGa-GiaGls~A~~La~~~G~-------~V~liE~~ 114 (495)
..|+|+|| |.+|.++++.|+ ++|+ +|+++|..
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~-~~g~~~~~~~~ev~l~D~~ 44 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIA-AGEMLGKDQPVILQLLEIP 44 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHH-TTTTTCTTCCEEEEEECCG
T ss_pred CEEEEECCCCHHHHHHHHHHH-hCCCCCCCCCCEEEEEeCC
Confidence 56999997 999999999998 4786 89999974
No 456
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=86.32 E-value=0.64 Score=40.32 Aligned_cols=33 Identities=30% Similarity=0.376 Sum_probs=29.4
Q ss_pred ccEEEECC-CHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGA-GIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGa-GiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
..|+|+|| |..|..++.+|+ ++|++|+++.+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~-~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAV-QAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHH-HCCCeEEEEEeCh
Confidence 45999998 999999999998 4899999999863
No 457
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=86.31 E-value=0.62 Score=44.11 Aligned_cols=33 Identities=24% Similarity=0.466 Sum_probs=28.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
...|+|||+|-+|.+.|+.|+. .+. .++|+|..
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~-~~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQ-QGIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHc-CCCCCEEEEEeCC
Confidence 4679999999999999999985 565 79999975
No 458
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.27 E-value=0.61 Score=45.34 Aligned_cols=33 Identities=39% Similarity=0.534 Sum_probs=29.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|+|||+|.+|..+|..|. ..|.+|+++|+.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~-~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIAN-GMGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCEEEEEeCC
Confidence 457999999999999999986 599999999975
No 459
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=86.24 E-value=0.81 Score=45.87 Aligned_cols=38 Identities=24% Similarity=0.498 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCCcCCCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKVVPCSG 119 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~~~~~g 119 (495)
.+||+|||||++|+++|+.|+ +.|+ +|+|+|++...+|
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~-~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLS-EAGITDLLILEATDHIGG 42 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHH-HTTCCCEEEECSSSSSBT
T ss_pred CCeEEEECCCHHHHHHHHHHH-hcCCCceEEEeCCCCCCC
Confidence 579999999999999999998 5898 8999999754333
No 460
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=86.23 E-value=1.4 Score=44.45 Aligned_cols=36 Identities=19% Similarity=0.336 Sum_probs=31.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHh-cCCccEEEEcCCc
Q 011027 80 HTFDVIIIGAGIIGLTIARQLLV-GSDLSVAVVDKVV 115 (495)
Q Consensus 80 ~~~dVvIIGaGiaGls~A~~La~-~~G~~V~liE~~~ 115 (495)
..+||+|||||++|+++|+.|.+ ..|.+|+|||++.
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~ 46 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDP 46 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 36899999999999999999864 2389999999974
No 461
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=86.14 E-value=0.56 Score=45.26 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.|+|||||..|..+|+.+ ++.|++|+++|.+.
T Consensus 3 ~I~ilGgg~~g~~~~~~A-k~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLS-KKAGMKVVLVDKNP 34 (363)
T ss_dssp EEEEECCSHHHHHHHHHH-HHTTCEEEEEESCT
T ss_pred EEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCC
Confidence 599999999999999987 57999999999863
No 462
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=85.96 E-value=0.6 Score=43.98 Aligned_cols=31 Identities=23% Similarity=0.521 Sum_probs=27.3
Q ss_pred cEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 83 DVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 83 dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
.|+|||+|-+|.++|+.|+. .|+ .|+|+|..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~-~~l~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMM-RGYDDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHH-HTCSCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHh-CCCCEEEEEcCC
Confidence 38999999999999999985 677 69999985
No 463
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=85.96 E-value=0.57 Score=43.46 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=29.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
...++|||+|-+|.++|+.|+ +.|. +|+|+.|.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~-~~G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLK-DNFAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHH-HTTCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHH-HcCCCEEEEEeCC
Confidence 457999999999999999998 5898 89999885
No 464
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=85.79 E-value=0.65 Score=43.26 Aligned_cols=31 Identities=26% Similarity=0.461 Sum_probs=28.2
Q ss_pred cEEEECC-CHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 83 DVIIIGA-GIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGa-GiaGls~A~~La~~~G~~V~liE~~ 114 (495)
+|+|.|| |.+|..++.+|. ++|++|+++.|+
T Consensus 2 kILVTGatGfIG~~L~~~L~-~~G~~V~~l~R~ 33 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLN-ARGHEVTLVSRK 33 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHH-HTTCEEEEEESS
T ss_pred EEEEECCCCHHHHHHHHHHH-HCCCEEEEEECC
Confidence 4999998 999999999997 599999999875
No 465
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=85.46 E-value=0.81 Score=46.87 Aligned_cols=35 Identities=26% Similarity=0.514 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~~~ 116 (495)
..+|+|||+|-.|+.+|..|+ ..|. +++|+|.+.+
T Consensus 327 ~~kVLIVGaGGLGs~va~~La-~aGVG~ItLvD~D~V 362 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALI-AWGVRKITFVDNGTV 362 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-TTTCCEEEEECCSBC
T ss_pred CCeEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCcc
Confidence 468999999999999999999 5887 7999998754
No 466
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=85.28 E-value=0.84 Score=43.25 Aligned_cols=34 Identities=21% Similarity=0.478 Sum_probs=29.7
Q ss_pred cccEEEECC-CHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGA-GIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGa-GiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
...|+|.|| |..|..++.+|+ ++|++|+++++..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~-~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWL-PQGHEILVIDNFA 54 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHG-GGTCEEEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCC
Confidence 356999997 999999999998 5899999999853
No 467
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=85.14 E-value=0.71 Score=43.72 Aligned_cols=33 Identities=24% Similarity=0.451 Sum_probs=28.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
..+|+|||+|-+|.++|+.|+. .|. .|.|+|..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~-~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVN-QSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCC
Confidence 3579999999999999999985 664 89999964
No 468
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=84.96 E-value=1.1 Score=39.52 Aligned_cols=32 Identities=25% Similarity=0.426 Sum_probs=28.1
Q ss_pred cEEEECC-CHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 83 DVIIIGA-GIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 83 dVvIIGa-GiaGls~A~~La~~~G~~V~liE~~ 114 (495)
.|+|+|| |-.|..+|..|+++.|++|+++.++
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC
Confidence 4999995 9999999999983489999999985
No 469
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=84.80 E-value=0.82 Score=42.85 Aligned_cols=34 Identities=35% Similarity=0.584 Sum_probs=30.1
Q ss_pred cccEEEECC-CHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 81 TFDVIIIGA-GIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGa-GiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
...|+|.|| |..|..++.+|+ ++|++|+++++..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~ 41 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALV-ASGEEVTVLDDLR 41 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-HTTCCEEEECCCS
T ss_pred CCeEEEECCCChHHHHHHHHHH-HCCCEEEEEecCC
Confidence 356999998 999999999998 4899999999864
No 470
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=84.77 E-value=0.82 Score=46.90 Aligned_cols=35 Identities=26% Similarity=0.514 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~~~ 116 (495)
..+|+|||+|-.|+.+|..|+ ..|. +++|+|.+..
T Consensus 326 ~arVLIVGaGGLGs~vA~~La-~aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALI-AWGVRKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHH-HcCCCEEEEEcCCCC
Confidence 578999999999999999999 4886 7999998754
No 471
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=84.58 E-value=0.86 Score=42.70 Aligned_cols=33 Identities=30% Similarity=0.415 Sum_probs=29.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|.|||+|-+|..+|..|. ..|.+|+++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~-~~G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFA-ALGANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHH-HTTCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHH-HCCCEEEEEECC
Confidence 356999999999999999996 589999999985
No 472
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=84.45 E-value=0.78 Score=42.29 Aligned_cols=32 Identities=16% Similarity=0.298 Sum_probs=28.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
..|+|||+|-+|.++|+.|+ +.|. +|+|+.|.
T Consensus 120 ~~vlvlGaGgaarav~~~L~-~~G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFK-NSGFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHH-HTTCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHH-HCCCCEEEEEeCC
Confidence 57999999999999999998 5896 79999885
No 473
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=84.41 E-value=0.56 Score=50.06 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=29.8
Q ss_pred ccEEEEC--CCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIG--AGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIG--aGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+|+||| ||.+|+-+|..|+ +.|.+|+|+++..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~-~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLA-TAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHH-HTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHH-HcCCEEEEEeccc
Confidence 5799999 9999999999998 5899999999864
No 474
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=84.32 E-value=0.77 Score=43.39 Aligned_cols=32 Identities=28% Similarity=0.362 Sum_probs=27.9
Q ss_pred cEEEECC-CHHHHHHHHHHHhcCC--ccEEEEcCCc
Q 011027 83 DVIIIGA-GIIGLTIARQLLVGSD--LSVAVVDKVV 115 (495)
Q Consensus 83 dVvIIGa-GiaGls~A~~La~~~G--~~V~liE~~~ 115 (495)
+|+|||| |-+|.++|+.|+ ..| ..|+|+|...
T Consensus 2 KI~IiGa~G~VG~~la~~L~-~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLK-NSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHH-TCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHH-hCCCCcEEEEEeCCc
Confidence 5899998 999999999998 477 6899998753
No 475
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=84.28 E-value=1.9 Score=43.69 Aligned_cols=54 Identities=15% Similarity=0.022 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcch
Q 011027 237 MLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWS 300 (495)
Q Consensus 237 ~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s 300 (495)
..+++.|.+.. | ++++++++|++|..+ +++ +.|.+.+|+.+.+|+||+|++.+.
T Consensus 215 ~~l~~~l~~~l---g----~~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 215 GQVSERIMDLL---G----DRVKLERPVIYIDQT--REN-VLVETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HHHHHHHHHHH---G----GGEESSCCEEEEECS--SSS-EEEEETTSCEEEESEEEECSCGGG
T ss_pred HHHHHHHHHHc---C----CcEEcCCeeEEEEEC--CCe-EEEEECCCeEEEeCEEEECCCHHH
Confidence 35666666543 3 478999999999875 344 458888887777899999999865
No 476
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=84.21 E-value=0.92 Score=42.71 Aligned_cols=33 Identities=15% Similarity=0.272 Sum_probs=28.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~ 114 (495)
...++|+|+|-+|.++|+.|+ +.|. +|+|+.|.
T Consensus 148 gk~~lVlGAGGaaraia~~L~-~~G~~~v~v~nRt 181 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAA-IEGIKEIKLFNRK 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCSEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHH-HcCCCEEEEEECC
Confidence 457999999999999999998 5898 79999874
No 477
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=84.17 E-value=0.73 Score=44.33 Aligned_cols=35 Identities=26% Similarity=0.396 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~~~ 116 (495)
..+|+|||+|-.|+.+|..|+ ..|. +++|+|.+..
T Consensus 118 ~~~VlvvG~GglGs~va~~La-~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILA-TSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHH-hCCCCeEEEECCCcC
Confidence 568999999999999999999 4886 7999998643
No 478
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=84.15 E-value=0.91 Score=45.39 Aligned_cols=36 Identities=31% Similarity=0.504 Sum_probs=29.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhc-------------------CC-ccEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVG-------------------SD-LSVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~-------------------~G-~~V~liE~~~~ 116 (495)
..+|+|||+|.+|+-+|..|++. .| .+|+|++++..
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 35799999999999999999741 25 48999998643
No 479
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=84.13 E-value=0.85 Score=45.56 Aligned_cols=32 Identities=22% Similarity=0.188 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|+|+|+|-+|..+|..|+ ..|.+|+++|+.
T Consensus 266 KtVvVtGaGgIG~aiA~~La-a~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALK-QAGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHH-HCCCEEEEEcCC
Confidence 56999999999999999997 599999999875
No 480
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=84.11 E-value=0.76 Score=44.06 Aligned_cols=35 Identities=20% Similarity=0.373 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~~~ 116 (495)
..+|+|||+|-.|+.+|..|+ ..|. +++|+|.+..
T Consensus 36 ~~~VlivG~GGlG~~ia~~La-~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLI-LAGVKGLTMLDHEQV 71 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHH-HcCCCEEEEEECCCc
Confidence 467999999999999999999 5887 8999998654
No 481
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=84.11 E-value=0.82 Score=42.48 Aligned_cols=33 Identities=18% Similarity=0.350 Sum_probs=29.1
Q ss_pred cccEEEECCC-HHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAG-IIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaG-iaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||+| ++|..+|..|+ +.|.+|+++.+.
T Consensus 165 gk~vvVIG~s~iVG~p~A~lL~-~~gAtVtv~hs~ 198 (301)
T 1a4i_A 165 GRHAVVVGRSKIVGAPMHDLLL-WNNATVTTCHSK 198 (301)
T ss_dssp TCEEEEECCCTTTHHHHHHHHH-HTTCEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHH-hCCCeEEEEECC
Confidence 4689999999 78999999997 599999999754
No 482
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=84.10 E-value=1.2 Score=40.58 Aligned_cols=33 Identities=33% Similarity=0.301 Sum_probs=28.5
Q ss_pred cccEEEECC-C-HHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGA-G-IIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGa-G-iaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|+|.|| | -.|..+|.+|+ ++|++|++++++
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~-~~G~~V~~~~r~ 56 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRAL-LEGADVVISDYH 56 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHH-HTTCEEEEEESC
T ss_pred CCEEEEECCCCCchHHHHHHHHH-HCCCEEEEecCC
Confidence 356899998 7 59999999998 499999999885
No 483
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=84.00 E-value=0.94 Score=42.45 Aligned_cols=32 Identities=16% Similarity=0.329 Sum_probs=27.4
Q ss_pred ccEEEECC-CHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGA-GIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGa-GiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..|+|.|| |..|..++.+|+ ++|++|+++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~ 35 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQ-QNNWHAVGCGFR 35 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-TTTCEEEEEC--
T ss_pred CeEEEECCCcHHHHHHHHHHH-hCCCeEEEEccC
Confidence 35999997 999999999998 589999999975
No 484
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=83.92 E-value=0.74 Score=42.82 Aligned_cols=32 Identities=19% Similarity=0.339 Sum_probs=28.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhcC--CccEEEEcCC
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGS--DLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~--G~~V~liE~~ 114 (495)
..|.|||+|..|.+.|..|++ . |.+|++++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~-~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKR-DHPHYKIVGYNRS 40 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HCTTSEEEEECSS
T ss_pred ceEEEEeeCHHHHHHHHHHHh-CCCCcEEEEEcCC
Confidence 469999999999999999974 5 6899999875
No 485
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=83.83 E-value=0.98 Score=44.89 Aligned_cols=36 Identities=17% Similarity=0.334 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc---cEEEEcCCcC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL---SVAVVDKVVP 116 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~---~V~liE~~~~ 116 (495)
+.+|+|||+|-+|..+|..|+++.++ +|+|+|+...
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~ 51 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT 51 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh
Confidence 45799999999999999999875666 7999998643
No 486
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=83.73 E-value=0.99 Score=42.12 Aligned_cols=33 Identities=24% Similarity=0.450 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|.|||+|-+|..+|..|. ..|.+|+++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~-~~G~~V~~~dr~ 187 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFA-ALGAKVKVGARE 187 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHH-hCCCEEEEEECC
Confidence 356999999999999999996 589999999985
No 487
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=83.68 E-value=1 Score=43.63 Aligned_cols=34 Identities=26% Similarity=0.226 Sum_probs=30.2
Q ss_pred cccEEEECC-CHHHHHHHHHHHhcCCc---cEEEEcCCc
Q 011027 81 TFDVIIIGA-GIIGLTIARQLLVGSDL---SVAVVDKVV 115 (495)
Q Consensus 81 ~~dVvIIGa-GiaGls~A~~La~~~G~---~V~liE~~~ 115 (495)
...|+|||| |.+|..++..+. ..|. +|+++|.+.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~-~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLH-KVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHH-HTTCCGGGEEEECHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHH-hCCCCcCceEEeeccc
Confidence 568999999 999999999886 6997 999999864
No 488
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=83.64 E-value=0.94 Score=46.05 Aligned_cols=58 Identities=12% Similarity=0.022 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhhhhccCCceeEEecCceeEEEEecCCCcEEEEEcCCCeeeecCeEEEccCcchH
Q 011027 236 AMLAVAYIEKGNRHFASKGRYAEFYHDPVTCLLRSNSTGEVEAVQTSKNTLYSKKAIVVAAGCWSG 301 (495)
Q Consensus 236 p~~~~~~l~~~~~~~g~~~~~~~~~~~~V~~l~~~~~~~~~~~v~~~~g~~~~a~~VV~A~G~~s~ 301 (495)
...+++.|.+.+.. ..++++++|++|..+ ++..+.|++.+|+.+.+|+||+|+..+.-
T Consensus 201 ~~~l~~~l~~~l~~------~~i~~~~~V~~I~~~--~~~~v~v~~~~g~~~~ad~VI~t~p~~~l 258 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQ------NWLKLSCEVKSITRE--PSKNVTVNCEDGTVYNADYVIITVPQSVL 258 (516)
T ss_dssp HHHHHHHHHTTSCG------GGEETTCCEEEEEEC--TTSCEEEEETTSCEEEEEEEEECCCHHHH
T ss_pred HHHHHHHHHHhCCC------CEEEECCEEEEEEEc--CCCeEEEEECCCcEEECCEEEECCCHHHh
Confidence 35566666554321 268999999999875 23346788888876778999999987543
No 489
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=83.54 E-value=1 Score=41.55 Aligned_cols=33 Identities=24% Similarity=0.506 Sum_probs=29.0
Q ss_pred cccEEEECCC-HHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAG-IIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaG-iaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|||+| +.|..+|..|+ +.|..|+++.+.
T Consensus 159 gk~vvVIG~s~iVG~p~A~lL~-~~gAtVtv~hs~ 192 (288)
T 1b0a_A 159 GLNAVVIGASNIVGRPMSMELL-LAGCTTTVTHRF 192 (288)
T ss_dssp TCEEEEECCCTTTHHHHHHHHH-TTTCEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHH-HCCCeEEEEeCC
Confidence 4689999999 68999999997 699999999754
No 490
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=83.52 E-value=1 Score=41.82 Aligned_cols=32 Identities=19% Similarity=0.389 Sum_probs=28.6
Q ss_pred ccEEEEC-CCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIG-AGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIG-aGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..++|+| +|-+|.++|+.|+ +.|.+|+++++.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~-~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLA-GEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCcCEEEEEECC
Confidence 5699999 9999999999998 489999999874
No 491
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=83.50 E-value=0.92 Score=46.73 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.+|+|||+|-.|..+|..|. +.|.+|+++|++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~-~~g~~v~vid~d~ 381 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLD-RKPVPFILIDRQE 381 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHH-HCCCCEEEEECCh
Confidence 67999999999999999997 5999999999974
No 492
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=83.72 E-value=0.23 Score=43.62 Aligned_cols=33 Identities=24% Similarity=0.287 Sum_probs=29.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
...|.|||+|-+|...|..|+ +.|.+|+++++.
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~-~~G~~V~~~~r~ 51 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKML-QCGYSVVFGSRN 51 (201)
Confidence 356999999999999999997 589999999875
No 493
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=83.07 E-value=0.87 Score=50.59 Aligned_cols=33 Identities=27% Similarity=0.233 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhcCCc-cEEEEcCCc
Q 011027 82 FDVIIIGAGIIGLTIARQLLVGSDL-SVAVVDKVV 115 (495)
Q Consensus 82 ~dVvIIGaGiaGls~A~~La~~~G~-~V~liE~~~ 115 (495)
.+|+|||||.+|+-+|..|+ +.|. +|+|++++.
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~-~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSAL-RCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHH-HTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHH-HcCCCEEEEEEecC
Confidence 47999999999999999997 5886 899999864
No 494
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=83.03 E-value=0.99 Score=43.63 Aligned_cols=32 Identities=38% Similarity=0.539 Sum_probs=27.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
+.+|+|||||.+|..+|..|+ +..+|+|.++.
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~--~~~~v~~~~~~ 47 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLK--DEFDVYIGDVN 47 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHT--TTSEEEEEESC
T ss_pred ccEEEEECCCHHHHHHHHHHh--cCCCeEEEEcC
Confidence 467999999999999999996 45799999875
No 495
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=82.91 E-value=1.1 Score=44.76 Aligned_cols=32 Identities=28% Similarity=0.564 Sum_probs=28.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+|+|+|||-.|..+|..| + .+++|.|+|++
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L-~-~~~~v~iIE~d 266 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRL-E-QTYSVKLIERN 266 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHH-T-TTSEEEEEESC
T ss_pred ccEEEEEcchHHHHHHHHHh-h-hcCceEEEecC
Confidence 35799999999999999998 4 56999999997
No 496
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=82.90 E-value=0.62 Score=42.95 Aligned_cols=32 Identities=22% Similarity=0.297 Sum_probs=26.6
Q ss_pred ccEEEECC-CHHHHHHHHHHHhcCCccEEEEcCC
Q 011027 82 FDVIIIGA-GIIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 82 ~dVvIIGa-GiaGls~A~~La~~~G~~V~liE~~ 114 (495)
..++|.|| |-+|..+|..|+ ++|++|++++++
T Consensus 22 k~vlVTGas~gIG~aia~~La-~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFA-EAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHH-HTTCEEEEEESC
T ss_pred cEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEECC
Confidence 45777774 678999999998 499999999875
No 497
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=82.81 E-value=1.1 Score=39.43 Aligned_cols=32 Identities=22% Similarity=0.477 Sum_probs=28.8
Q ss_pred cEEEEC-CCHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 83 DVIIIG-AGIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 83 dVvIIG-aGiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.|+|+| +|..|..++..|+ ++|++|+++.|..
T Consensus 2 ~ilItGatG~iG~~l~~~L~-~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLS-TTDYQIYAGARKV 34 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHT-TSSCEEEEEESSG
T ss_pred eEEEECCCCHHHHHHHHHHH-HCCCEEEEEECCc
Confidence 489999 7999999999998 5899999999963
No 498
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=82.79 E-value=1.1 Score=42.58 Aligned_cols=33 Identities=24% Similarity=0.549 Sum_probs=28.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhcCCc--cEEEEcCC
Q 011027 81 TFDVIIIGAGIIGLTIARQLLVGSDL--SVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaGiaGls~A~~La~~~G~--~V~liE~~ 114 (495)
...|+|||+|-+|.+.|+.|+. .+. .++|+|..
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~-~~~~~el~L~Di~ 43 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVL-QGIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHc-CCCCCEEEEEeCC
Confidence 4679999999999999999984 554 79999975
No 499
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=82.66 E-value=1.1 Score=40.34 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=28.3
Q ss_pred cEEEECC-CHHHHHHHHHHHhcCCccEEEEcCCc
Q 011027 83 DVIIIGA-GIIGLTIARQLLVGSDLSVAVVDKVV 115 (495)
Q Consensus 83 dVvIIGa-GiaGls~A~~La~~~G~~V~liE~~~ 115 (495)
.|+|.|| |-.|..+|.+|++ +|++|+++++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-~g~~V~~~~r~~ 35 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-AGHTVIGIDRGQ 35 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSS
T ss_pred EEEEeCCCcHHHHHHHHHHHh-CCCEEEEEeCCh
Confidence 4899997 9999999999984 899999999863
No 500
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=82.61 E-value=0.98 Score=41.41 Aligned_cols=33 Identities=21% Similarity=0.379 Sum_probs=28.5
Q ss_pred cccEEEECCC-HHHHHHHHHHHhcCCccEEEEcCC
Q 011027 81 TFDVIIIGAG-IIGLTIARQLLVGSDLSVAVVDKV 114 (495)
Q Consensus 81 ~~dVvIIGaG-iaGls~A~~La~~~G~~V~liE~~ 114 (495)
..+++|||+| ++|..+|..|+ +.|..|++..+.
T Consensus 150 Gk~vvVvG~s~iVG~plA~lL~-~~gAtVtv~~~~ 183 (276)
T 3ngx_A 150 ENTVTIVNRSPVVGRPLSMMLL-NRNYTVSVCHSK 183 (276)
T ss_dssp SCEEEEECCCTTTHHHHHHHHH-HTTCEEEEECTT
T ss_pred CCEEEEEcCChHHHHHHHHHHH-HCCCeEEEEeCC
Confidence 4689999975 89999999997 599999999763
Done!