Your job contains 1 sequence.
>011036
MDLSGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDV
IQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPD
KPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGIT
RGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLE
GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM
DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEV
PSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKG
FSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVY
STCTINPGENEALCA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011036
(495 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2009170 - symbol:AT1G06560 species:3702 "Arabi... 1542 2.9e-158 1
UNIPROTKB|E1BQJ7 - symbol:NSUN6 "Uncharacterized protein"... 396 1.5e-59 3
UNIPROTKB|F1RWA0 - symbol:NSUN6 "Uncharacterized protein"... 390 2.5e-59 3
RGD|1309535 - symbol:Nsun6 "NOP2/Sun domain family, membe... 395 4.1e-59 3
UNIPROTKB|E2RDT7 - symbol:NSUN6 "Uncharacterized protein"... 364 1.9e-57 3
MGI|MGI:1921705 - symbol:Nsun6 "NOL1/NOP2/Sun domain fami... 376 1.7e-56 3
UNIPROTKB|F1MC44 - symbol:NSUN6 "Uncharacterized protein"... 366 1.9e-55 3
UNIPROTKB|Q8TEA1 - symbol:NSUN6 "Putative methyltransfera... 358 1.9e-55 3
FB|FBgn0037200 - symbol:CG11109 species:7227 "Drosophila ... 327 1.7e-54 3
DICTYBASE|DDB_G0290553 - symbol:DDB_G0290553 "PUA domain-... 350 1.7e-52 2
TIGR_CMR|GSU_3373 - symbol:GSU_3373 "Sun protein" species... 167 1.3e-18 2
UNIPROTKB|Q81WH3 - symbol:sun "Sun protein" species:1392 ... 176 6.7e-18 3
TIGR_CMR|BA_4003 - symbol:BA_4003 "sun protein" species:1... 176 6.7e-18 3
UNIPROTKB|Q9V106 - symbol:PYRAB06230 "tRNA (cytosine(49)-... 171 7.5e-18 2
UNIPROTKB|Q749J3 - symbol:GSU2749 "NOL1/NOP2/Sun (TRNA an... 148 1.0e-17 2
TIGR_CMR|GSU_2749 - symbol:GSU_2749 "NOL1/NOP2/sun family... 148 1.0e-17 2
UNIPROTKB|Q3AAI6 - symbol:CHY_2029 "NOL1/NOP2/sun family ... 148 6.1e-16 2
TIGR_CMR|CHY_2029 - symbol:CHY_2029 "NOL1/NOP2/sun family... 148 6.1e-16 2
CGD|CAL0000046 - symbol:orf19.501 species:5476 "Candida a... 144 9.2e-16 3
UNIPROTKB|P76273 - symbol:rsmF "16S rRNA m5C1407 methyltr... 155 1.4e-15 3
UNIPROTKB|Q5HVD5 - symbol:CJE0739 "NOL1/NOP2/sun family p... 136 3.7e-15 2
TIGR_CMR|CJE_0739 - symbol:CJE_0739 "NOL1/NOP2/sun family... 136 3.7e-15 2
TAIR|locus:2090054 - symbol:AT3G13180 species:3702 "Arabi... 144 5.8e-15 2
UNIPROTKB|Q60343 - symbol:trm4 "tRNA (cytosine(48)-C(5))-... 144 6.4e-15 3
WB|WBGene00021073 - symbol:nol-1 species:6239 "Caenorhabd... 142 8.5e-15 3
SGD|S000005005 - symbol:NOP2 "Probable RNA m(5)C methyltr... 136 1.8e-14 3
DICTYBASE|DDB_G0281685 - symbol:nol1 "NOL1/NOP2/Sun famil... 149 3.4e-14 3
UNIPROTKB|G4MY77 - symbol:MGG_01292 "Nucleolar protein NO... 139 8.1e-14 3
TIGR_CMR|SO_2215 - symbol:SO_2215 "sun protein, putative"... 121 8.5e-14 3
UNIPROTKB|Q9KVU5 - symbol:rsmB "Ribosomal RNA small subun... 128 1.2e-13 2
TIGR_CMR|VC_0044 - symbol:VC_0044 "sun protein" species:6... 128 1.2e-13 2
ZFIN|ZDB-GENE-050309-7 - symbol:nop2 "NOP2 nucleolar prot... 149 2.4e-13 3
UNIPROTKB|Q0BWV2 - symbol:HNE_3368 "Putative ribosomal RN... 139 3.7e-13 2
POMBASE|SPBP8B7.20c - symbol:SPBP8B7.20c "RNA methyltrans... 123 4.8e-13 3
TAIR|locus:2178393 - symbol:OLI2 "OLIGOCELLULA 2" species... 130 5.2e-13 3
TIGR_CMR|CHY_1481 - symbol:CHY_1481 "sun protein" species... 129 5.2e-13 2
ASPGD|ASPL0000013404 - symbol:AN8073 species:162425 "Emer... 145 5.3e-13 3
UNIPROTKB|F1NH85 - symbol:Gga.5513 "Uncharacterized prote... 143 8.2e-13 3
TIGR_CMR|SPO_3376 - symbol:SPO_3376 "ribosomal RNA small ... 132 2.3e-12 2
UNIPROTKB|F1NK16 - symbol:Gga.5513 "Uncharacterized prote... 143 2.6e-12 3
UNIPROTKB|Q8EDY2 - symbol:rsmF "Ribosomal RNA small subun... 129 4.9e-12 3
TIGR_CMR|SO_2609 - symbol:SO_2609 "NOL1/NOP2/sun family p... 129 4.9e-12 3
UNIPROTKB|Q0P5D8 - symbol:NSUN3 "Putative methyltransfera... 137 6.5e-12 3
UNIPROTKB|Q9H649 - symbol:NSUN3 "Putative methyltransfera... 135 7.4e-12 3
RGD|1304616 - symbol:Nop2 "NOP2 nucleolar protein" specie... 140 8.9e-12 3
MGI|MGI:107891 - symbol:Nop2 "NOP2 nucleolar protein" spe... 141 9.6e-12 3
UNIPROTKB|F1SLR6 - symbol:NOP2 "Uncharacterized protein" ... 140 1.4e-11 3
FB|FBgn0033741 - symbol:CG8545 species:7227 "Drosophila m... 137 1.6e-11 3
UNIPROTKB|F1N3G2 - symbol:NOP2 "Uncharacterized protein" ... 140 2.9e-11 3
UNIPROTKB|P46087 - symbol:NOP2 "Putative ribosomal RNA me... 137 3.7e-11 3
UNIPROTKB|P36929 - symbol:rsmB "16S rRNA m5C967 methyltra... 126 3.7e-11 2
ZFIN|ZDB-GENE-050706-95 - symbol:nsun3 "NOP2/Sun domain f... 126 4.8e-11 2
UNIPROTKB|E2RCH6 - symbol:NOP2 "Uncharacterized protein" ... 138 4.8e-11 3
TIGR_CMR|SO_0030 - symbol:SO_0030 "sun protein" species:2... 130 5.5e-11 2
MGI|MGI:2146565 - symbol:Nsun3 "NOL1/NOP2/Sun domain fami... 132 6.4e-11 2
ZFIN|ZDB-GENE-040426-2476 - symbol:nsun5 "NOP2/Sun domain... 136 1.8e-10 3
TIGR_CMR|CBU_1915 - symbol:CBU_1915 "Sun protein" species... 117 2.3e-10 2
UNIPROTKB|F1S0R7 - symbol:NSUN2 "Uncharacterized protein"... 125 4.3e-10 2
MGI|MGI:2140844 - symbol:Nsun5 "NOL1/NOP2/Sun domain fami... 151 5.2e-10 3
UNIPROTKB|F1PRL0 - symbol:NSUN2 "Uncharacterized protein"... 125 1.1e-09 2
UNIPROTKB|Q96P11 - symbol:NSUN5 "Putative methyltransfera... 153 1.5e-09 2
MGI|MGI:107252 - symbol:Nsun2 "NOL1/NOP2/Sun domain famil... 126 1.6e-09 2
UNIPROTKB|D4A3S8 - symbol:Nsun2 "NOL1/NOP2/Sun domain fam... 126 1.7e-09 2
UNIPROTKB|F1MK61 - symbol:NSUN2 "Uncharacterized protein"... 119 1.8e-09 2
UNIPROTKB|Q08J23 - symbol:NSUN2 "tRNA (cytosine(34)-C(5))... 125 2.6e-09 2
UNIPROTKB|P71675 - symbol:MT1451 "Putative methyltransfer... 123 2.7e-09 2
TIGR_CMR|CPS_0018 - symbol:CPS_0018 "sun protein" species... 116 3.5e-09 2
DICTYBASE|DDB_G0295715 - symbol:DDB_G0295715 "NOL1/NOP2/S... 128 7.0e-09 2
FB|FBgn0026079 - symbol:Nsun2 "NOP2-Sun domain family, me... 127 7.8e-09 2
UNIPROTKB|F1NJM1 - symbol:NSUN2 "tRNA (cytosine(34)-C(5))... 129 8.9e-09 2
UNIPROTKB|Q5ZLV4 - symbol:NSUN2 "tRNA (cytosine(34)-C(5))... 129 9.0e-09 2
ZFIN|ZDB-GENE-030131-4017 - symbol:nsun2 "NOL1/NOP2/Sun d... 121 1.1e-08 2
ZFIN|ZDB-GENE-041212-77 - symbol:nsun4 "NOL1/NOP2/Sun dom... 108 2.1e-08 2
POMBASE|SPAC23C4.17 - symbol:trm402 "tRNA (cytosine-5-)-m... 129 2.5e-08 2
CGD|CAL0000089 - symbol:orf19.518 species:5476 "Candida a... 117 4.2e-08 2
ASPGD|ASPL0000055599 - symbol:AN0757 species:162425 "Emer... 128 6.4e-08 2
TIGR_CMR|SO_1575 - symbol:SO_1575 "NOL1/NOP2/sun family p... 117 8.4e-08 2
TAIR|locus:2179749 - symbol:AT5G26180 "AT5G26180" species... 136 1.2e-07 3
SGD|S000000120 - symbol:NCL1 "S-adenosyl-L-methionine-dep... 115 1.3e-07 2
TIGR_CMR|SPO_2037 - symbol:SPO_2037 "NOL1/NOP2/sun family... 99 1.8e-07 2
POMBASE|SPAC17D4.04 - symbol:trm401 "tRNA (cytosine-5-)-m... 118 6.5e-07 2
TAIR|locus:2041213 - symbol:AT2G22400 species:3702 "Arabi... 106 6.6e-07 3
UNIPROTKB|Q0C183 - symbol:HNE_1806 "NOL1/NOP2/sun domain ... 102 1.4e-06 3
GENEDB_PFALCIPARUM|PFL1475w - symbol:PFL1475w "sun-family... 98 1.4e-06 2
UNIPROTKB|Q8I5B4 - symbol:PFL1475w "Sun-family protein, p... 98 1.4e-06 2
UNIPROTKB|Q9KRY1 - symbol:rsmF "Ribosomal RNA small subun... 144 2.0e-06 2
TIGR_CMR|VC_1502 - symbol:VC_1502 "NOL1/NOP2/sun family p... 144 2.0e-06 2
UNIPROTKB|Q96CB9 - symbol:NSUN4 "5-methylcytosine rRNA me... 97 3.1e-06 2
WB|WBGene00021686 - symbol:Y48G8AL.5 species:6239 "Caenor... 102 3.2e-06 2
MGI|MGI:1919431 - symbol:Nsun4 "NOL1/NOP2/Sun domain fami... 91 4.2e-06 2
UNIPROTKB|Q0V8R7 - symbol:NSUN4 "5-methylcytosine rRNA me... 91 4.3e-06 2
TAIR|locus:2140094 - symbol:AT4G40000 species:3702 "Arabi... 103 4.4e-06 2
UNIPROTKB|F1S3W1 - symbol:NSUN4 "Uncharacterized protein"... 90 8.9e-06 2
POMBASE|SPAC2C4.06c - symbol:SPAC2C4.06c "tRNA (cytosine-... 95 2.0e-05 3
TAIR|locus:2133832 - symbol:AT4G26600 species:3702 "Arabi... 131 0.00011 2
UNIPROTKB|G3V1R4 - symbol:NSUN2 "NOL1/NOP2/Sun domain fam... 125 0.00014 1
SGD|S000004967 - symbol:YNL022C "Putative cytosine 5-meth... 96 0.00033 2
TAIR|locus:2156902 - symbol:AT5G66180 species:3702 "Arabi... 89 0.00053 2
>TAIR|locus:2009170 [details] [associations]
symbol:AT1G06560 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR002478
InterPro:IPR018314 Pfam:PF01472 PROSITE:PS01153 PROSITE:PS50890
SMART:SM00359 Pfam:PF01189 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0003723 GO:GO:0008168 GO:GO:0032259 InterPro:IPR015947
SUPFAM:SSF88697 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HOGENOM:HOG000224258 OMA:DTEGEPP
HSSP:O50082 EMBL:BT006450 EMBL:AK227718 IPI:IPI00527095
RefSeq:NP_172143.3 UniGene:At.48158 UniGene:At.71039
ProteinModelPortal:Q84MA1 SMR:Q84MA1 STRING:Q84MA1 PaxDb:Q84MA1
PRIDE:Q84MA1 EnsemblPlants:AT1G06560.1 GeneID:837167
KEGG:ath:AT1G06560 TAIR:At1g06560 InParanoid:Q84MA1
PhylomeDB:Q84MA1 ProtClustDB:CLSN2680685 Genevestigator:Q84MA1
Uniprot:Q84MA1
Length = 599
Score = 1542 (547.9 bits), Expect = 2.9e-158, P = 2.9e-158
Identities = 309/491 (62%), Positives = 370/491 (75%)
Query: 4 SGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQK 63
S RY Y P+LRWNP+VE+YF +AYG DHF+RISKALTRPS YSCIRVNT+KTT+D VI+K
Sbjct: 44 SERYCYDPVLRWNPEVEDYFTKAYGPDHFARISKALTRPSSYSCIRVNTVKTTSDAVIEK 103
Query: 64 LLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPP 123
L I+ +S E G + +++ QIPGL+YVVFV GSGPH I+Y + PP
Sbjct: 104 LTKILNDS--EEGLKLVQPDG---SSPVTKCQIPGLDYVVFVNGSGPHKIEYDSGLENPP 158
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
KEV+VSRKCAEAVLRGAQVYVPGV+AC++HVEKGD VAV VA+EQP +G W + +TRGT
Sbjct: 159 KEVLVSRKCAEAVLRGAQVYVPGVLACTAHVEKGDAVAVCVAMEQPGDEGDWSVNMTRGT 218
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEI 243
LQG TDPYY ERSGLYIG GTAM+SRAG+FR GIAVD+++R+F+LPS +++LEGEI
Sbjct: 219 TLQGLPTDPYYRERSGLYIGMGTAMLSRAGMFRVPNGIAVDLNHRVFRLPSLHNILEGEI 278
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
FLQNLPSI+ AHALDPQKGERILDMCAAPGGKTTAIA L+ DEGE+VA DRSHNKV+ +Q
Sbjct: 279 FLQNLPSIIVAHALDPQKGERILDMCAAPGGKTTAIAILMNDEGEIVAADRSHNKVLVVQ 338
Query: 304 KLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDS-MKLHKEVPS 362
L+AEMG CITT KLDALK+V N+ + N DN+ +S TS S + ++E+ S
Sbjct: 339 NLSAEMGFTCITTCKLDALKSVCLPTTLNESTILING-DNS--SSMTSHSELSSNEEMTS 395
Query: 363 IAAEGLNGDKSCKEKVSNEKGVERTYVSKADTXXXXXXXXXXXXXXQCLGGRAENSKGFS 422
+ + DKSC++ S E+ VS+A QC GGRA S+GF
Sbjct: 396 VTSRRSEADKSCEKNDSTEQPNGGDNVSQAYIRKNKGRLKNGRGRTQCQGGRAGKSQGFP 455
Query: 423 PNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
PNSFDRVLLDAPCSALGLRPRLFA ET+ SLRNHG YQR+M DQAVQLVR GGI+VYST
Sbjct: 456 PNSFDRVLLDAPCSALGLRPRLFAGLETVVSLRNHGWYQRKMLDQAVQLVRVGGILVYST 515
Query: 483 CTINPGENEAL 493
CTINP ENEA+
Sbjct: 516 CTINPSENEAV 526
>UNIPROTKB|E1BQJ7 [details] [associations]
symbol:NSUN6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR002478
InterPro:IPR018314 PROSITE:PS01153 PROSITE:PS50890 Pfam:PF01189
GO:GO:0003723 GO:GO:0008168 GO:GO:0032259 InterPro:IPR015947
SUPFAM:SSF88697 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 GeneTree:ENSGT00660000095341 CTD:221078
EMBL:AADN02000637 IPI:IPI00586956 RefSeq:XP_425980.2
ProteinModelPortal:E1BQJ7 Ensembl:ENSGALT00000013950 GeneID:428419
KEGG:gga:428419 OMA:FIAKFMK NextBio:20829415 Uniprot:E1BQJ7
Length = 469
Score = 396 (144.5 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 92/220 (41%), Positives = 132/220 (60%)
Query: 121 KPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGIT 180
K EVIV +C AVLRGA VYVPG+++ S V+ GD+V+V +E
Sbjct: 109 KHESEVIVGAQCGYAVLRGAHVYVPGIISTSRFVKTGDLVSVYSDIE------------- 155
Query: 181 RGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPSFYD 237
G +G++ FE +++G G + +SR+ IF + G+ V M ++ PSF
Sbjct: 156 -GKCKRGAKE----FEGVKVFLGNGISELSRSDIFGLNGRTTGLGVRMTEPVYLSPSFES 210
Query: 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297
VL +FLQNLPS+V +H L+PQ GERILDMCAAPGGKTT +A+L+ D+GEV+A+D+ N
Sbjct: 211 VLPSHLFLQNLPSVVVSHVLNPQPGERILDMCAAPGGKTTHLATLMHDQGEVIAMDKIAN 270
Query: 298 KVMDIQKLAAEMGLKCITTYKLDALKA--VRRKNESNDEP 335
KV I++ A + L CI + D KA V ++ + +EP
Sbjct: 271 KVKKIKQNAELLQLNCIKAFCYDGTKALSVEKREDKQEEP 310
Score = 201 (75.8 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 37/71 (52%), Positives = 52/71 (73%)
Query: 421 FSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVY 480
F P SFDR+LLDAPCS +G RP + A T++ + ++ QR++F AV+L++PGG++VY
Sbjct: 312 FLPESFDRILLDAPCSGMGQRPNM-AYSSTLKEVTSYQPLQRKLFTVAVKLLKPGGVLVY 370
Query: 481 STCTINPGENE 491
STCTI ENE
Sbjct: 371 STCTITLSENE 381
Score = 43 (20.2 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 20/75 (26%), Positives = 31/75 (41%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYGADH----FSRISKALTRPSCYSCIRVNTLK 54
S+ P + + +VEEY I A G + + L+ P + +RVNT
Sbjct: 2 SFFPKISFQREVEEYLSKVFRNNELITALGTKEAESKYQSLLSHLSHPPAITTVRVNTNL 61
Query: 55 TTTDDVIQKLLAIIQ 69
+ V + LL IQ
Sbjct: 62 ASVRHVKKLLLEEIQ 76
Score = 38 (18.4 bits), Expect = 1.6e-42, Sum P(3) = 1.6e-42
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 349 QTSDSMKLHKEVPSIAAEGLNG 370
+T ++L + P I EG+ G
Sbjct: 389 ETFPCLQLQPQEPHIGGEGMRG 410
>UNIPROTKB|F1RWA0 [details] [associations]
symbol:NSUN6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008168 "methyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002478
InterPro:IPR018314 PROSITE:PS01153 PROSITE:PS50890 SMART:SM00359
Pfam:PF01189 GO:GO:0003723 GO:GO:0008168 GO:GO:0032259
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 GeneTree:ENSGT00660000095341
CTD:221078 OMA:DTEGEPP EMBL:CU929575 EMBL:FP102227
RefSeq:XP_003130779.1 UniGene:Ssc.21317 Ensembl:ENSSSCT00000012085
GeneID:100524391 KEGG:ssc:100524391 Uniprot:F1RWA0
Length = 472
Score = 390 (142.3 bits), Expect = 2.5e-59, Sum P(3) = 2.5e-59
Identities = 89/214 (41%), Positives = 129/214 (60%)
Query: 125 EVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTV 184
EVIV +C +VLRGA VYVPG+++ S ++ GD V+V + +G
Sbjct: 113 EVIVGAQCGNSVLRGAHVYVPGIVSASKFMKGGDTVSVYSDI--------------KGKC 158
Query: 185 LQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPSFYDVLEG 241
+G++ F+ + +++G G + +SR IF +GI + M ++ PSF DVL G
Sbjct: 159 KKGAKE----FDGTKIFLGNGISELSRKEIFSGLPDLKGIGIRMTEPVYLSPSFDDVLPG 214
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301
+FLQNLPS V H LDPQ GERILD+CAAPGGKTT IA+ +RD+GEV+A+D+ NKV
Sbjct: 215 YLFLQNLPSAVVTHVLDPQPGERILDLCAAPGGKTTHIAARMRDQGEVIALDKIANKVEK 274
Query: 302 IQKLAAEMGLKCITTYKLDALKAVRRKNESNDEP 335
I++ A +GL I + D KA++ ++ EP
Sbjct: 275 IKQNALLLGLNSIRAFCFDGTKALKLDIDTEGEP 308
Score = 201 (75.8 bits), Expect = 2.5e-59, Sum P(3) = 2.5e-59
Identities = 37/76 (48%), Positives = 53/76 (69%)
Query: 416 ENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPG 475
E F P SFDR+LLDAPCS +G RP + A T++ + ++ QR++F AV+L++PG
Sbjct: 305 EGEPPFLPESFDRILLDAPCSGMGQRPNM-ACTWTLKEVTSYQPLQRKLFTVAVELLKPG 363
Query: 476 GIIVYSTCTINPGENE 491
G++VYSTCT+ ENE
Sbjct: 364 GVLVYSTCTVTLAENE 379
Score = 47 (21.6 bits), Expect = 2.5e-59, Sum P(3) = 2.5e-59
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 16 NPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNT-------LKTTTDDVIQK 63
N +V F + F + + L+ P ++ +RVNT +KT D +QK
Sbjct: 23 NKEVVSAFGKQEAERKFETLLQNLSHPPSFTTVRVNTHLASVQHVKTLLHDELQK 77
Score = 37 (18.1 bits), Expect = 3.3e-42, Sum P(3) = 3.3e-42
Identities = 10/45 (22%), Positives = 20/45 (44%)
Query: 350 TSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADT 394
T ++L ++ P I G+ G E++ + + + V DT
Sbjct: 388 TFPCLQLQRQDPQIGGAGMMGAGLTSEQLKQLQRFDPSVVPSWDT 432
>RGD|1309535 [details] [associations]
symbol:Nsun6 "NOP2/Sun domain family, member 6" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA]
InterPro:IPR002478 InterPro:IPR018314 Pfam:PF01472 PROSITE:PS01153
PROSITE:PS50890 SMART:SM00359 Pfam:PF01189 RGD:1309535
GO:GO:0003723 GO:GO:0008168 GO:GO:0032259 InterPro:IPR015947
SUPFAM:SSF88697 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HOGENOM:HOG000224258
GeneTree:ENSGT00660000095341 CTD:221078 HOVERGEN:HBG060395
OMA:DTEGEPP OrthoDB:EOG46T31F EMBL:CH473990 EMBL:BC162024
IPI:IPI00190813 RefSeq:NP_001100837.1 UniGene:Rn.11617
STRING:B1WC69 Ensembl:ENSRNOT00000025046 GeneID:307148
KEGG:rno:307148 UCSC:RGD:1309535 NextBio:657011
Genevestigator:B1WC69 Uniprot:B1WC69
Length = 476
Score = 395 (144.1 bits), Expect = 4.1e-59, Sum P(3) = 4.1e-59
Identities = 91/205 (44%), Positives = 129/205 (62%)
Query: 125 EVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTV 184
EVIV +C AVLRGA VYVPGV++ S ++ GDVV+V + +G
Sbjct: 113 EVIVGAQCGNAVLRGAHVYVPGVVSASKFMKAGDVVSVYSDI--------------KGKC 158
Query: 185 LQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPSFYDVLEG 241
+G++ F+ + +++G G + +SR IF +GI + M I+ PSF +VL G
Sbjct: 159 KKGAKE----FDGTKVFLGNGISELSRKDIFNGLPDLKGIGIRMTEPIYLSPSFDNVLSG 214
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301
IFLQNLPS V AH LDPQ GE+ILD+CAAPGGKTT IA+L+RD+GEV+A+D+ KV
Sbjct: 215 YIFLQNLPSTVVAHVLDPQPGEKILDLCAAPGGKTTHIAALMRDQGEVIALDKILTKVTK 274
Query: 302 IQKLAAEMGLKCITTYKLDALKAVR 326
+++ A+ +GL I + DA KA++
Sbjct: 275 LKQNASLLGLHSIRAFCFDATKALK 299
Score = 196 (74.1 bits), Expect = 4.1e-59, Sum P(3) = 4.1e-59
Identities = 36/71 (50%), Positives = 52/71 (73%)
Query: 421 FSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVY 480
F P SFDR+LLDAPCS LG RP + A T++ + ++ QR++ + AV+L++PGG++VY
Sbjct: 312 FLPESFDRILLDAPCSGLGQRPNM-ACTWTLKEVTSYQPLQRKLLNVAVRLLKPGGVLVY 370
Query: 481 STCTINPGENE 491
STCT+ ENE
Sbjct: 371 STCTVTLAENE 381
Score = 45 (20.9 bits), Expect = 4.1e-59, Sum P(3) = 4.1e-59
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 31 HFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNS--GSS 74
+F + L+ P ++ +RVNT + + V LL +Q GSS
Sbjct: 38 NFETLLLRLSHPPLFTTVRVNTHLGSVEHVRGLLLEELQKQFGGSS 83
>UNIPROTKB|E2RDT7 [details] [associations]
symbol:NSUN6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002478 InterPro:IPR018314 PROSITE:PS01153
PROSITE:PS50890 Pfam:PF01189 GO:GO:0003723 GO:GO:0008168
GO:GO:0032259 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 GeneTree:ENSGT00660000095341
OMA:DTEGEPP EMBL:AAEX03001240 RefSeq:XP_003638939.1
ProteinModelPortal:E2RDT7 Ensembl:ENSCAFT00000007127
GeneID:100855876 KEGG:cfa:100855876 NextBio:20860756 Uniprot:E2RDT7
Length = 469
Score = 364 (133.2 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 84/205 (40%), Positives = 123/205 (60%)
Query: 125 EVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTV 184
E IV +C AVLRGA VYVPG+++ S ++ GDV +V + +G
Sbjct: 113 EAIVGAQCGNAVLRGAHVYVPGIVSTSKFMKAGDVTSVYSDI--------------KGKC 158
Query: 185 LQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPSFYDVLEG 241
+G++ F+ + +++G G + +SR IF +G + M ++ PSF +VL
Sbjct: 159 KKGAKE----FDGTKVFLGNGISELSRKEIFSGVPELKGRGIRMTEPVYLSPSFDNVLPR 214
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301
+FLQNLPS V H LDPQ GE+ILD+CAAPGGKTT IA+L+RD+GEV+A+D+ NKV
Sbjct: 215 YLFLQNLPSAVVTHVLDPQPGEKILDLCAAPGGKTTHIAALMRDQGEVIALDKISNKVEK 274
Query: 302 IQKLAAEMGLKCITTYKLDALKAVR 326
I++ A +GL I + D KA++
Sbjct: 275 IKQNALLLGLNSIKAFCFDGTKALK 299
Score = 213 (80.0 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 40/78 (51%), Positives = 56/78 (71%)
Query: 414 RAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVR 473
+AE + F P SFDR+LLDAPCS +G RP + A T++ + ++ QR++F AVQL++
Sbjct: 305 KAEGNPPFLPESFDRILLDAPCSGMGQRPNM-ACSWTLKEVTSYQPLQRKLFTVAVQLLK 363
Query: 474 PGGIIVYSTCTINPGENE 491
PGG++VYSTCTI ENE
Sbjct: 364 PGGVLVYSTCTITLAENE 381
Score = 43 (20.2 bits), Expect = 1.9e-57, Sum P(3) = 1.9e-57
Identities = 13/54 (24%), Positives = 22/54 (40%)
Query: 16 NPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQ 69
N +V F + F + L+ P ++ +RVNT + V L +Q
Sbjct: 23 NKEVISAFGKQEAERKFEALLNHLSHPPSFTTVRVNTHLASVQQVKDLLFHELQ 76
Score = 38 (18.4 bits), Expect = 3.5e-39, Sum P(3) = 3.5e-39
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 349 QTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADT 394
+T ++L + P I EG+ G E++ + + + V DT
Sbjct: 389 RTFPCLQLQPQDPQIGGEGMMGAGLSFEQLKQLQRFDPSVVPSWDT 434
>MGI|MGI:1921705 [details] [associations]
symbol:Nsun6 "NOL1/NOP2/Sun domain family member 6"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008168 "methyltransferase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0032259
"methylation" evidence=IEA] InterPro:IPR002478 PROSITE:PS01153
PROSITE:PS50890 SMART:SM00359 Pfam:PF01189 MGI:MGI:1921705
GO:GO:0003723 GO:GO:0008168 InterPro:IPR015947 SUPFAM:SSF88697
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 GeneTree:ENSGT00660000095341 CTD:221078
HOVERGEN:HBG060395 OMA:DTEGEPP OrthoDB:EOG46T31F EMBL:AK016811
EMBL:AK077778 EMBL:AK132428 EMBL:BC025622 EMBL:BC053751
IPI:IPI00136575 RefSeq:NP_001159413.1 RefSeq:NP_001159415.1
RefSeq:NP_083226.3 UniGene:Mm.478923 ProteinModelPortal:Q7TS68
SMR:Q7TS68 STRING:Q7TS68 PhosphoSite:Q7TS68 PaxDb:Q7TS68
PRIDE:Q7TS68 Ensembl:ENSMUST00000028034 Ensembl:ENSMUST00000076435
GeneID:74455 KEGG:mmu:74455 InParanoid:Q7TS68 ChiTaRS:NSUN6
NextBio:340811 Bgee:Q7TS68 CleanEx:MM_NSUN6 Genevestigator:Q7TS68
GermOnline:ENSMUSG00000026707 Uniprot:Q7TS68
Length = 476
Score = 376 (137.4 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 87/205 (42%), Positives = 126/205 (61%)
Query: 125 EVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTV 184
EVIV +C AVLRGA VYVPG+++ S ++ GDV++V + G
Sbjct: 113 EVIVGAQCGNAVLRGAHVYVPGIVSASKFMKAGDVISVYSDIN--------------GKC 158
Query: 185 LQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPSFYDVLEG 241
+G++ F+ + +++G G + +SR IF +GI + M I+ PSF +VL
Sbjct: 159 KKGAKE----FDGTKVFLGNGISELSRKDIFNGLPDLKGIGIRMTEPIYLSPSFDNVLPS 214
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301
IFLQNLPS V AH LDPQ GE+ILDMCAAPGGKTT A+L++D+GEV+A+D+ KV
Sbjct: 215 YIFLQNLPSTVVAHVLDPQPGEKILDMCAAPGGKTTHTAALMQDKGEVIALDKILTKVNK 274
Query: 302 IQKLAAEMGLKCITTYKLDALKAVR 326
+++ A+ +GL I + DA KA++
Sbjct: 275 LKQNASLLGLHSIRAFCFDATKALK 299
Score = 197 (74.4 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 37/76 (48%), Positives = 52/76 (68%)
Query: 416 ENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPG 475
E F P SFDR++LDAPCS +G RP + A T++ + ++ QR++ AVQL++PG
Sbjct: 307 EGGPPFLPESFDRIILDAPCSGMGQRPNM-ACTWTLKEVTSYQPLQRKLLHVAVQLLKPG 365
Query: 476 GIIVYSTCTINPGENE 491
G++VYSTCTI ENE
Sbjct: 366 GVLVYSTCTITLAENE 381
Score = 38 (18.4 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNS-GSSEADV 78
F + L+ P + +RVNT + V LL +Q G S V
Sbjct: 39 FETLLLRLSHPPSMTTVRVNTHLGSVQHVRGLLLEELQKQFGESSIPV 86
>UNIPROTKB|F1MC44 [details] [associations]
symbol:NSUN6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008168 "methyltransferase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002478
InterPro:IPR018314 PROSITE:PS01153 PROSITE:PS50890 Pfam:PF01189
GO:GO:0003723 GO:GO:0008168 GO:GO:0032259 InterPro:IPR015947
SUPFAM:SSF88697 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 GeneTree:ENSGT00660000095341 EMBL:DAAA02035594
EMBL:DAAA02035593 IPI:IPI00839349 UniGene:Bt.16570
Ensembl:ENSBTAT00000029347 OMA:QTCEVIV ArrayExpress:F1MC44
Uniprot:F1MC44
Length = 408
Score = 366 (133.9 bits), Expect = 1.9e-55, Sum P(3) = 1.9e-55
Identities = 86/216 (39%), Positives = 129/216 (59%)
Query: 125 EVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTV 184
EVIV +C AVLRGA VYVPG+++ S ++ GD V+V + +G
Sbjct: 113 EVIVGAQCGSAVLRGAHVYVPGIVSASKFMKGGDDVSVYSDI--------------KGKC 158
Query: 185 LQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPSFYDVLEG 241
+G++ F+ + +++G G + +SR IF +G+ V M ++ PSF +VL
Sbjct: 159 KKGAKE----FDGTKIFLGNGISELSRKEIFSGLPELKGVGVRMTEPVYLSPSFDNVLPS 214
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301
+FLQNLPS V +H LDPQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A+D+ KV
Sbjct: 215 YLFLQNLPSAVVSHVLDPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALDKISKKVEK 274
Query: 302 IQKLAAEMGLKCITTYKLDALKAVRRK--NESNDEP 335
I++ A +GL I + D KA++ +++ EP
Sbjct: 275 IKQNALLLGLNSIRAFCFDGTKALKLDMVKDTDGEP 310
Score = 197 (74.4 bits), Expect = 1.9e-55, Sum P(3) = 1.9e-55
Identities = 36/71 (50%), Positives = 52/71 (73%)
Query: 421 FSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVY 480
F P SFDR+LLDAPCS +G RP + A T++ + ++ QR++F AV+L++PGG++VY
Sbjct: 312 FLPESFDRILLDAPCSGMGQRPNM-ACTWTLKEVMSYQPLQRKLFTVAVELLKPGGMLVY 370
Query: 481 STCTINPGENE 491
STCT+ ENE
Sbjct: 371 STCTVTLAENE 381
Score = 38 (18.4 bits), Expect = 1.9e-55, Sum P(3) = 1.9e-55
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 32 FSRISKALTRPSCYSCIRVNT 52
F + L+ P ++ +RVNT
Sbjct: 39 FETLLHNLSHPPSFTTVRVNT 59
>UNIPROTKB|Q8TEA1 [details] [associations]
symbol:NSUN6 "Putative methyltransferase NSUN6"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA]
InterPro:IPR002478 InterPro:IPR018314 PROSITE:PS01153
PROSITE:PS50890 Pfam:PF01189 GO:GO:0003723 EMBL:CH471072
GO:GO:0008168 InterPro:IPR015947 SUPFAM:SSF88697 EMBL:AL450384
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 HSSP:Q96P11 EMBL:AK074323 EMBL:EF445003
EMBL:AL512641 EMBL:BC035778 IPI:IPI00152688 RefSeq:NP_872349.1
UniGene:Hs.396175 ProteinModelPortal:Q8TEA1 SMR:Q8TEA1
STRING:Q8TEA1 PhosphoSite:Q8TEA1 DMDM:74751440 PaxDb:Q8TEA1
PeptideAtlas:Q8TEA1 PRIDE:Q8TEA1 DNASU:221078
Ensembl:ENST00000377304 GeneID:221078 KEGG:hsa:221078
UCSC:uc010qcp.1 CTD:221078 GeneCards:GC10M018874 HGNC:HGNC:23529
HPA:HPA045902 neXtProt:NX_Q8TEA1 PharmGKB:PA134986220
HOVERGEN:HBG060395 InParanoid:Q8TEA1 OMA:DTEGEPP OrthoDB:EOG46T31F
PhylomeDB:Q8TEA1 GenomeRNAi:221078 NextBio:91183 Bgee:Q8TEA1
CleanEx:HS_NSUN6 Genevestigator:Q8TEA1 GermOnline:ENSG00000152487
Uniprot:Q8TEA1
Length = 469
Score = 358 (131.1 bits), Expect = 1.9e-55, Sum P(3) = 1.9e-55
Identities = 81/205 (39%), Positives = 123/205 (60%)
Query: 125 EVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTV 184
E IV +C AVLRGA VY PG+++ S ++ GDV++V + +G
Sbjct: 113 EAIVGAQCGNAVLRGAHVYAPGIVSASQFMKAGDVISVYSDI--------------KGKC 158
Query: 185 LQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPSFYDVLEG 241
+G++ F+ + +++G G + +SR IF +G+ + M ++ PSF VL
Sbjct: 159 KKGAKE----FDGTKVFLGNGISELSRKEIFSGLPELKGMGIRMTEPVYLSPSFDSVLPR 214
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301
+FLQNLPS + +H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A+D+ NKV
Sbjct: 215 YLFLQNLPSALVSHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALDKIFNKVEK 274
Query: 302 IQKLAAEMGLKCITTYKLDALKAVR 326
I++ A +GL I + D KAV+
Sbjct: 275 IKQNALLLGLNSIRAFCFDGTKAVK 299
Score = 195 (73.7 bits), Expect = 1.9e-55, Sum P(3) = 1.9e-55
Identities = 37/76 (48%), Positives = 52/76 (68%)
Query: 416 ENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPG 475
E F P SFDR+LLDAPCS +G RP + A +++ + ++ QR++F AVQL++P
Sbjct: 307 EGEPPFLPESFDRILLDAPCSGMGQRPNM-ACTWSVKEVASYQPLQRKLFTAAVQLLKPE 365
Query: 476 GIIVYSTCTINPGENE 491
G++VYSTCTI ENE
Sbjct: 366 GVLVYSTCTITLAENE 381
Score = 48 (22.0 bits), Expect = 1.9e-55, Sum P(3) = 1.9e-55
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQ 69
F + K L+ P ++ +RVNT + V LL +Q
Sbjct: 39 FETLLKHLSHPPSFTTVRVNTHLASVQHVKNLLLDELQ 76
Score = 40 (19.1 bits), Expect = 2.7e-39, Sum P(3) = 2.7e-39
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 354 MKLHKEVPSIAAEGLNG-DKSCKE 376
++L + P I EG+ G SC++
Sbjct: 394 LQLQPQEPQIGGEGMRGAGLSCEQ 417
>FB|FBgn0037200 [details] [associations]
symbol:CG11109 species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=ISS] [GO:0008649 "rRNA
methyltransferase activity" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002478 InterPro:IPR018314 Pfam:PF01472
PROSITE:PS01153 PROSITE:PS50890 SMART:SM00359 Pfam:PF01189
EMBL:AE014296 GO:GO:0003723 GO:GO:0008168 InterPro:IPR015947
SUPFAM:SSF88697 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 GeneTree:ENSGT00660000095341 HSSP:O50082
EMBL:BT046128 RefSeq:NP_730761.1 UniGene:Dm.3802 SMR:Q8IPS4
MINT:MINT-833211 STRING:Q8IPS4 EnsemblMetazoa:FBtr0078552
GeneID:40507 KEGG:dme:Dmel_CG11109 UCSC:CG11109-RB
FlyBase:FBgn0037200 InParanoid:Q8IPS4 OMA:NLPSIVC OrthoDB:EOG4X0K80
GenomeRNAi:40507 NextBio:819100 Uniprot:Q8IPS4
Length = 439
Score = 327 (120.2 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 83/211 (39%), Positives = 120/211 (56%)
Query: 120 DKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGI 179
D KEV+V C A+LRGA +Y PGV+A S+ E+ ++V V LDG
Sbjct: 98 DSELKEVVVDTNCGAALLRGAHIYAPGVLAMESNTEREELVNVYA-----DLDGK----C 148
Query: 180 TRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASE----GIAVDMHNRIFQLPSF 235
RGTV + Y + +++G G +M R +F +E G+AV+M + + +P+
Sbjct: 149 KRGTVKR-------YESPNKVFLGTGKVLMQRYQLFNNAEKPASGVAVEMQSNVSGVPTL 201
Query: 236 YDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRS 295
D+ + LQNLPSIV LDPQ GERILDMCAAPG KT+ IA L+ D G VVA+D S
Sbjct: 202 GDLSSEDGLLQNLPSIVCVRVLDPQPGERILDMCAAPGNKTSHIAELMGDRGSVVALDNS 261
Query: 296 HNKVMDIQKLAAEMG-LKCITTYKLDALKAV 325
++V + + ++G K IT + ++ +AV
Sbjct: 262 ASRV---RSMLPKLGHYKSITAHVFNSTEAV 289
Score = 218 (81.8 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 43/75 (57%), Positives = 55/75 (73%)
Query: 421 FSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVY 480
F SFDR+LLDAPCS LG RP+L + + ++ L ++ QRR+F+QAVQLVRPGGI+VY
Sbjct: 306 FPCESFDRILLDAPCSGLGNRPQLSCSIKQVKVLSSYPHIQRRLFEQAVQLVRPGGILVY 365
Query: 481 STCTINPGENEALCA 495
STCT+ E E L A
Sbjct: 366 STCTVTEDECECLVA 380
Score = 48 (22.0 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 7 YSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKL 64
Y +P L NP +E ++ A + P + RVNTL+ + DD +KL
Sbjct: 3 YPKTPFLV-NPLLEADILKVNSAALAPLLEWLCLTPKV-TTYRVNTLRCSVDDFRKKL 58
Score = 40 (19.1 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 236 YDVLEGEIF-LQNLPSIVTAHALDPQKGERILD 267
Y V I+ L NLP ++ LD Q + + D
Sbjct: 66 YGVKSPRIYCLPNLPEMLCIDPLDSQLTKAVAD 98
>DICTYBASE|DDB_G0290553 [details] [associations]
symbol:DDB_G0290553 "PUA domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002478 PROSITE:PS50890
dictyBase:DDB_G0290553 Pfam:PF01189 GO:GO:0003723
InterPro:IPR015947 SUPFAM:SSF88697 EMBL:AAFI02000164 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 OMA:DTEGEPP
RefSeq:XP_635647.1 ProteinModelPortal:Q54FX0
EnsemblProtists:DDB0304591 GeneID:8627719 KEGG:ddi:DDB_G0290553
InParanoid:Q54FX0 ProtClustDB:CLSZ2429656 Uniprot:Q54FX0
Length = 501
Score = 350 (128.3 bits), Expect = 1.7e-52, Sum P(2) = 1.7e-52
Identities = 102/347 (29%), Positives = 184/347 (53%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLL-------AIIQN 70
+V + I+ YG +H RI K++T+ Y+ IRVNT+ T D ++ L I+N
Sbjct: 36 EVLNHLIKYYGKEHMERIQKSMTQTFLYTTIRVNTMNTNKDKLLIDLSNHFKTNEKSIEN 95
Query: 71 SG-----SSEADVASSVKGRLQNGTISESQIPGL--EYVVFVKGSGPHTIDYGYEPDKPP 123
S D+ ++++ N + +I + +F+K GP I +P P
Sbjct: 96 QEIFTNFKSFNDILNNIENN-NNDNDNNDEIKNQISKDTIFIKTIGP-LIP---KPIYP- 149
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
++IV C EAVLRG+ ++ GV+ + +++KG++V+V V T+D +++G
Sbjct: 150 -QIIVDLICGEAVLRGSNIFSIGVLGSNKYIKKGNMVSVFV-----TIDSR----VSKGE 199
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEI 243
+ + F+ +IG G +++ R + G+A++M R++ P VLE ++
Sbjct: 200 IFEDC------FKEKCAFIGNGISLLDRDDYHQTRVGVAIEMTERLYVCPPLNSVLEDKM 253
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
FLQ+LPSI T + L+P+ G++I+DMCAAPGGKTT IASL++ + E+ ++++ K +
Sbjct: 254 FLQHLPSIYTVYQLEPKLGDKIIDMCAAPGGKTTLIASLIQ-QFEINN-NQNNQKYQNNN 311
Query: 304 KLAAEMGLKCITTYKLDALKAVRR-KNESNDEPNMCNSKDNNYITSQ 349
++ E + + K K + K S D+ C +KD++ +T +
Sbjct: 312 EIKTE--IFALDKNKGKVKKIIDLCKRLSLDKYVTCLAKDSSKLTKE 356
Score = 291 (107.5 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 74/236 (31%), Positives = 132/236 (55%)
Query: 125 EVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTV 184
++IV C EAVLRG+ ++ GV+ + +++KG++V+V V T+D +++G +
Sbjct: 150 QIIVDLICGEAVLRGSNIFSIGVLGSNKYIKKGNMVSVFV-----TIDSR----VSKGEI 200
Query: 185 LQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIF 244
+ F+ +IG G +++ R + G+A++M R++ P VLE ++F
Sbjct: 201 FEDC------FKEKCAFIGNGISLLDRDDYHQTRVGVAIEMTERLYVCPPLNSVLEDKMF 254
Query: 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
LQ+LPSI T + L+P+ G++I+DMCAAPGGKTT IASL++ + E+ ++++ K + +
Sbjct: 255 LQHLPSIYTVYQLEPKLGDKIIDMCAAPGGKTTLIASLIQ-QFEINN-NQNNQKYQNNNE 312
Query: 305 LAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKD-NNYITSQTSDSMKLHKE 359
+ E+ + LD + K + ++C + Y+T DS KL KE
Sbjct: 313 IKTEI-------FALD-----KNKGKVKKIIDLCKRLSLDKYVTCLAKDSSKLTKE 356
Score = 224 (83.9 bits), Expect = 1.7e-52, Sum P(2) = 1.7e-52
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 421 FSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVY 480
F NSFD+VLLD PCS LG RPRL + + L N ++Q+++ DQAV L++PGGI+VY
Sbjct: 367 FQSNSFDKVLLDGPCSGLGSRPRLIESSSLVD-LTNSSEFQKKLIDQAVSLLKPGGILVY 425
Query: 481 STCTINPGENE 491
STC+INP ENE
Sbjct: 426 STCSINPEENE 436
Score = 46 (21.3 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 288 EVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRRKNE 330
E+ A+D++ KV I L + L K +T D+ K + +
Sbjct: 316 EIFALDKNKGKVKKIIDLCKRLSLDKYVTCLAKDSSKLTKENQQ 359
Score = 37 (18.1 bits), Expect = 7.3e-33, Sum P(2) = 7.3e-33
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 332 NDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGL 368
N E N N +Y+ + + MKL ++P I+ GL
Sbjct: 431 NPEENELNV---SYLLNNYPE-MKLIPQIPHISQPGL 463
>TIGR_CMR|GSU_3373 [details] [associations]
symbol:GSU_3373 "Sun protein" species:243231 "Geobacter
sulfurreducens PCA" [GO:0000154 "rRNA modification" evidence=ISS]
[GO:0008649 "rRNA methyltransferase activity" evidence=ISS]
InterPro:IPR004573 InterPro:IPR006027 InterPro:IPR018314
Pfam:PF01029 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
GO:GO:0006355 GO:GO:0003723 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0031167 GO:GO:0008649 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 Gene3D:1.10.940.10 SUPFAM:SSF48013
HOGENOM:HOG000037300 KO:K03500 TIGRFAMs:TIGR00563 OMA:TSHPEWL
RefSeq:NP_954413.1 ProteinModelPortal:Q746Z4 GeneID:2686993
KEGG:gsu:GSU3373 PATRIC:22029601 ProtClustDB:CLSK829253
BioCyc:GSUL243231:GH27-3332-MONOMER Uniprot:Q746Z4
Length = 448
Score = 167 (63.8 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 42/116 (36%), Positives = 62/116 (53%)
Query: 220 GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
GI + + LP F EG + +Q+ S + + L+P+ GER+LD CA+PGGK T +
Sbjct: 218 GIRILSRTAVPALPGFG---EGLVIVQDESSQLASLLLEPRSGERVLDACASPGGKATHL 274
Query: 280 ASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEP 335
A ++ D+GEV+A D S K+ I + A +G+ I DA R E N P
Sbjct: 275 AQIMADKGEVIAWDVSEKKLSPIAENARRLGIGIIRPAMADA-----RNPEQNAAP 325
Score = 132 (51.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 426 FDRVLLDAPCSALGLRPRLFAAE--ETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTC 483
FDR+L+DAPCSALG+ R + +T + + Q R+ A L++PGG ++YSTC
Sbjct: 326 FDRILVDAPCSALGVLRRTPEGKWWKTPDDVARLAQSQCRILAGAASLLKPGGTLLYSTC 385
Query: 484 TINPGENEAL 493
+ ENE++
Sbjct: 386 STTTDENESI 395
Score = 70 (29.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 43/181 (23%), Positives = 85/181 (46%)
Query: 3 LSGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQ 62
L+ R+S+ P RW + E +I G + +++ + P + +RVNTL+T+ + ++
Sbjct: 148 LALRHSH-P--RW---IVEGWIAQLGFEEAEALAEVMAAPPPLT-LRVNTLRTSREAYLE 200
Query: 63 KLLAIIQNSGSSEADVASSVKG-RLQNGTISESQIPGL-EYVVFVKGSGPHTIDYGYEPD 120
+++ +G+ S G R+ + T + +PG E +V V+ EP
Sbjct: 201 ----LLREAGTEAEPTRHSPHGIRILSRTAVPA-LPGFGEGLVIVQDESSQLASLLLEP- 254
Query: 121 KPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQ--PTLDGGWGLG 178
+ + V+ + CA G ++ +MA +KG+V+A V+ ++ P + LG
Sbjct: 255 RSGERVLDA--CASP--GGKATHLAQIMA-----DKGEVIAWDVSEKKLSPIAENARRLG 305
Query: 179 I 179
I
Sbjct: 306 I 306
>UNIPROTKB|Q81WH3 [details] [associations]
symbol:sun "Sun protein" species:1392 "Bacillus anthracis"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR004573
InterPro:IPR006027 InterPro:IPR018314 Pfam:PF01029 PROSITE:PS01153
Pfam:PF01189 GO:GO:0005737 GO:GO:0006355 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
GO:GO:0031167 GO:GO:0008649 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 Gene3D:1.10.940.10 SUPFAM:SSF48013
HOGENOM:HOG000037300 KO:K03500 TIGRFAMs:TIGR00563 HSSP:O50082
OMA:TSHPEWL RefSeq:NP_846245.1 RefSeq:YP_020643.1
RefSeq:YP_029967.1 ProteinModelPortal:Q81WH3 DNASU:1086737
EnsemblBacteria:EBBACT00000011480 EnsemblBacteria:EBBACT00000014895
EnsemblBacteria:EBBACT00000021944 GeneID:1086737 GeneID:2815784
GeneID:2852994 KEGG:ban:BA_4003 KEGG:bar:GBAA_4003 KEGG:bat:BAS3716
ProtClustDB:PRK14902 BioCyc:BANT260799:GJAJ-3774-MONOMER
BioCyc:BANT261594:GJ7F-3891-MONOMER Uniprot:Q81WH3
Length = 444
Score = 176 (67.0 bits), Expect = 6.7e-18, Sum P(3) = 6.7e-18
Identities = 40/96 (41%), Positives = 62/96 (64%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ ILD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 322
Score = 116 (45.9 bits), Expect = 6.7e-18, Sum P(3) = 6.7e-18
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 421 FSPNSFDRVLLDAPCSALGL---RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGI 477
F+ +FD++L+DAPCS G+ +P + ++ S R Q + ++ L++ GG
Sbjct: 315 FANETFDKILVDAPCSGFGVIRRKPDIKLGKDKGDSERL-SMIQFAILEKIAPLLKQGGR 373
Query: 478 IVYSTCTINPGENE 491
+VYSTCTI ENE
Sbjct: 374 LVYSTCTIEKIENE 387
Score = 37 (18.1 bits), Expect = 6.7e-18, Sum P(3) = 6.7e-18
Identities = 16/72 (22%), Positives = 32/72 (44%)
Query: 48 IRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKG 107
+R N + D +IQ ++ SG+ + +++ ++ TI I L +V+
Sbjct: 1 MRQNVRELALDGLIQ-----VEKSGAYSNLLLNNL---IEKSTIDRKDIGLLTEIVYGTI 52
Query: 108 SGPHTIDYGYEP 119
T+DY +P
Sbjct: 53 QRRDTLDYYLQP 64
>TIGR_CMR|BA_4003 [details] [associations]
symbol:BA_4003 "sun protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0008150 "biological_process" evidence=ND]
[GO:0008173 "RNA methyltransferase activity" evidence=ISS]
InterPro:IPR004573 InterPro:IPR006027 InterPro:IPR018314
Pfam:PF01029 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
GO:GO:0006355 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 GO:GO:0031167 GO:GO:0008649
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 HOGENOM:HOG000037300 KO:K03500
TIGRFAMs:TIGR00563 HSSP:O50082 OMA:TSHPEWL RefSeq:NP_846245.1
RefSeq:YP_020643.1 RefSeq:YP_029967.1 ProteinModelPortal:Q81WH3
DNASU:1086737 EnsemblBacteria:EBBACT00000011480
EnsemblBacteria:EBBACT00000014895 EnsemblBacteria:EBBACT00000021944
GeneID:1086737 GeneID:2815784 GeneID:2852994 KEGG:ban:BA_4003
KEGG:bar:GBAA_4003 KEGG:bat:BAS3716 ProtClustDB:PRK14902
BioCyc:BANT260799:GJAJ-3774-MONOMER
BioCyc:BANT261594:GJ7F-3891-MONOMER Uniprot:Q81WH3
Length = 444
Score = 176 (67.0 bits), Expect = 6.7e-18, Sum P(3) = 6.7e-18
Identities = 40/96 (41%), Positives = 62/96 (64%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ ILD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 322
Score = 116 (45.9 bits), Expect = 6.7e-18, Sum P(3) = 6.7e-18
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 421 FSPNSFDRVLLDAPCSALGL---RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGI 477
F+ +FD++L+DAPCS G+ +P + ++ S R Q + ++ L++ GG
Sbjct: 315 FANETFDKILVDAPCSGFGVIRRKPDIKLGKDKGDSERL-SMIQFAILEKIAPLLKQGGR 373
Query: 478 IVYSTCTINPGENE 491
+VYSTCTI ENE
Sbjct: 374 LVYSTCTIEKIENE 387
Score = 37 (18.1 bits), Expect = 6.7e-18, Sum P(3) = 6.7e-18
Identities = 16/72 (22%), Positives = 32/72 (44%)
Query: 48 IRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKG 107
+R N + D +IQ ++ SG+ + +++ ++ TI I L +V+
Sbjct: 1 MRQNVRELALDGLIQ-----VEKSGAYSNLLLNNL---IEKSTIDRKDIGLLTEIVYGTI 52
Query: 108 SGPHTIDYGYEP 119
T+DY +P
Sbjct: 53 QRRDTLDYYLQP 64
>UNIPROTKB|Q9V106 [details] [associations]
symbol:PYRAB06230 "tRNA
(cytosine(49)-C(5))-methyltransferase" species:272844 "Pyrococcus
abyssi GE5" [GO:0000049 "tRNA binding" evidence=IDA] [GO:0016428
"tRNA (cytosine-5-)-methyltransferase activity" evidence=IDA]
[GO:0030488 "tRNA methylation" evidence=IDA] InterPro:IPR011023
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737 GO:GO:0000049
EMBL:HE613800 GenomeReviews:AL096836_GR GO:GO:0006364
eggNOG:COG0144 GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 HOGENOM:HOG000224258 TIGRFAMs:TIGR00446
EMBL:AJ248284 PIR:B75183 RefSeq:NP_126314.1 HSSP:O50082
ProteinModelPortal:Q9V106 EnsemblBacteria:EBPYRT00000003778
GeneID:1495530 KEGG:pab:PAB1947 OMA:ENTFDRV ProtClustDB:CLSK541567
Uniprot:Q9V106
Length = 311
Score = 171 (65.3 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 34/70 (48%), Positives = 50/70 (71%)
Query: 424 NSFDRVLLDAPCSALGL-RPRL-FAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYS 481
N+FDRVLLDAPCS++G+ R FA +I + H + Q+R+ A + ++PGG++VYS
Sbjct: 178 NTFDRVLLDAPCSSVGMIRKNFKFARTWSIGKVYYHSRLQKRLILAAYKSLKPGGVLVYS 237
Query: 482 TCTINPGENE 491
TCT++P ENE
Sbjct: 238 TCTVDPLENE 247
Score = 112 (44.5 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
G I Q S++ LDP+ E ILDM AAPG KTT +A + +EG ++A D ++
Sbjct: 90 GLIIPQEASSMIPPVVLDPKPSEVILDMAAAPGSKTTQMAQYMENEGCIIANDAKRDR 147
>UNIPROTKB|Q749J3 [details] [associations]
symbol:GSU2749 "NOL1/NOP2/Sun (TRNA and rRNA
cytosine-C5-methyltransferase) family protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01189 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008168
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 OMA:YSEEVRK RefSeq:NP_953794.1
ProteinModelPortal:Q749J3 GeneID:2685973 KEGG:gsu:GSU2749
PATRIC:22028341 ProtClustDB:CLSK2761235
BioCyc:GSUL243231:GH27-2740-MONOMER Uniprot:Q749J3
Length = 319
Score = 148 (57.2 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I++Q+L S+ AL P+ GE +LD+ AAPGGKT +A+++ + G + AV+ +
Sbjct: 92 EGRIYIQSLSSMTAPLALAPEPGETVLDLAAAPGGKTAMMAAMMENRGRLSAVEAVRGRF 151
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRK 328
++ G + TY D ++V RK
Sbjct: 152 FRMKANLDHQGATMVRTYLTDG-RSVGRK 179
Score = 138 (53.6 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 413 GRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFA---AEETIQSLRNHGKYQRRMFDQAV 469
GR+ K P FDRVLLDAPCS+ RL A + + + + QR + A+
Sbjct: 173 GRSVGRK--CPEMFDRVLLDAPCSSEARFTRLNPESWAHWSPRKVEEAARKQRGLIRSAL 230
Query: 470 QLVRPGGIIVYSTCTINPGENEAL 493
+ +RPGG+++Y TC+ +P ENE +
Sbjct: 231 EALRPGGLLLYCTCSFSPEENELI 254
>TIGR_CMR|GSU_2749 [details] [associations]
symbol:GSU_2749 "NOL1/NOP2/sun family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF01189 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008168 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 OMA:YSEEVRK RefSeq:NP_953794.1
ProteinModelPortal:Q749J3 GeneID:2685973 KEGG:gsu:GSU2749
PATRIC:22028341 ProtClustDB:CLSK2761235
BioCyc:GSUL243231:GH27-2740-MONOMER Uniprot:Q749J3
Length = 319
Score = 148 (57.2 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I++Q+L S+ AL P+ GE +LD+ AAPGGKT +A+++ + G + AV+ +
Sbjct: 92 EGRIYIQSLSSMTAPLALAPEPGETVLDLAAAPGGKTAMMAAMMENRGRLSAVEAVRGRF 151
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRK 328
++ G + TY D ++V RK
Sbjct: 152 FRMKANLDHQGATMVRTYLTDG-RSVGRK 179
Score = 138 (53.6 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 413 GRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFA---AEETIQSLRNHGKYQRRMFDQAV 469
GR+ K P FDRVLLDAPCS+ RL A + + + + QR + A+
Sbjct: 173 GRSVGRK--CPEMFDRVLLDAPCSSEARFTRLNPESWAHWSPRKVEEAARKQRGLIRSAL 230
Query: 470 QLVRPGGIIVYSTCTINPGENEAL 493
+ +RPGG+++Y TC+ +P ENE +
Sbjct: 231 EALRPGGLLLYCTCSFSPEENELI 254
>UNIPROTKB|Q3AAI6 [details] [associations]
symbol:CHY_2029 "NOL1/NOP2/sun family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011023
InterPro:IPR018314 PROSITE:PS01153 Pfam:PF01189 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0006364 GO:GO:0008757
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 RefSeq:YP_360848.1 ProteinModelPortal:Q3AAI6
STRING:Q3AAI6 GeneID:3728223 KEGG:chy:CHY_2029 PATRIC:21277139
HOGENOM:HOG000218116 OMA:YAGLYYI
BioCyc:CHYD246194:GJCN-2028-MONOMER Uniprot:Q3AAI6
Length = 449
Score = 148 (57.2 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 31/72 (43%), Positives = 47/72 (65%)
Query: 426 FDRVLLDAPCSALGL-RPRLFAAEE-TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTC 483
FDR+L+DAPCS G+ R A +E +I+ + Q+++ A +L++ GG++VYSTC
Sbjct: 168 FDRILVDAPCSGEGMFRKNPKAIDEWSIEHVLGCSVRQKKLLTTAAKLLKEGGVMVYSTC 227
Query: 484 TINPGENEALCA 495
T NP ENE + A
Sbjct: 228 TFNPEENERVVA 239
Score = 127 (49.8 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA--VDRSHNK 298
G +LQ +++ LDP+ G+++LD+ AAPGGK+T I S L+ EG +VA V+ S K
Sbjct: 77 GAFYLQEPSAMLPVEVLDPKPGDKVLDLAAAPGGKSTQILSKLKGEGILVANEVNSSRAK 136
Query: 299 VM 300
V+
Sbjct: 137 VL 138
Score = 46 (21.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 24/88 (27%), Positives = 36/88 (40%)
Query: 2 DLSGRYSYSPLLRWNPQVEEYFIRA---YGAD--HFSRISKALTRPSCYSCIRVNTLKTT 56
DL RY Y + W P E Y++ G D H++ + L PS + + V L
Sbjct: 42 DLYRRYGYLETVPWCP--EGYYLSEDMFLGKDPWHWAG-AFYLQEPS--AMLPVEVLDPK 96
Query: 57 TDDVIQKLLAIIQNSGSSEADVASSVKG 84
D K+L + G + S +KG
Sbjct: 97 PGD---KVLDLAAAPGGKSTQILSKLKG 121
>TIGR_CMR|CHY_2029 [details] [associations]
symbol:CHY_2029 "NOL1/NOP2/sun family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011023
InterPro:IPR018314 PROSITE:PS01153 Pfam:PF01189 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0006364 GO:GO:0008757
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 RefSeq:YP_360848.1 ProteinModelPortal:Q3AAI6
STRING:Q3AAI6 GeneID:3728223 KEGG:chy:CHY_2029 PATRIC:21277139
HOGENOM:HOG000218116 OMA:YAGLYYI
BioCyc:CHYD246194:GJCN-2028-MONOMER Uniprot:Q3AAI6
Length = 449
Score = 148 (57.2 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 31/72 (43%), Positives = 47/72 (65%)
Query: 426 FDRVLLDAPCSALGL-RPRLFAAEE-TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTC 483
FDR+L+DAPCS G+ R A +E +I+ + Q+++ A +L++ GG++VYSTC
Sbjct: 168 FDRILVDAPCSGEGMFRKNPKAIDEWSIEHVLGCSVRQKKLLTTAAKLLKEGGVMVYSTC 227
Query: 484 TINPGENEALCA 495
T NP ENE + A
Sbjct: 228 TFNPEENERVVA 239
Score = 127 (49.8 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA--VDRSHNK 298
G +LQ +++ LDP+ G+++LD+ AAPGGK+T I S L+ EG +VA V+ S K
Sbjct: 77 GAFYLQEPSAMLPVEVLDPKPGDKVLDLAAAPGGKSTQILSKLKGEGILVANEVNSSRAK 136
Query: 299 VM 300
V+
Sbjct: 137 VL 138
Score = 46 (21.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 24/88 (27%), Positives = 36/88 (40%)
Query: 2 DLSGRYSYSPLLRWNPQVEEYFIRA---YGAD--HFSRISKALTRPSCYSCIRVNTLKTT 56
DL RY Y + W P E Y++ G D H++ + L PS + + V L
Sbjct: 42 DLYRRYGYLETVPWCP--EGYYLSEDMFLGKDPWHWAG-AFYLQEPS--AMLPVEVLDPK 96
Query: 57 TDDVIQKLLAIIQNSGSSEADVASSVKG 84
D K+L + G + S +KG
Sbjct: 97 PGD---KVLDLAAAPGGKSTQILSKLKG 121
>CGD|CAL0000046 [details] [associations]
symbol:orf19.501 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 CGD:CAL0000046
Pfam:PF01189 GO:GO:0003723 GO:GO:0032259 EMBL:AACQ01000055
EMBL:AACQ01000054 GO:GO:0006364 GO:GO:0008757 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 KO:K14835
TIGRFAMs:TIGR00446 RefSeq:XP_717364.1 RefSeq:XP_717453.1
ProteinModelPortal:Q5A6Q3 STRING:Q5A6Q3 GeneID:3640912
GeneID:3640977 KEGG:cal:CaO19.501 KEGG:cal:CaO19.8131
Uniprot:Q5A6Q3
Length = 618
Score = 144 (55.7 bits), Expect = 9.2e-16, Sum P(3) = 9.2e-16
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G+ LQ S + AL+PQ+ ERILDM AAPGGKTT I++L+++ G V A D
Sbjct: 325 EYLAGQYILQAASSFLPVMALEPQENERILDMAAAPGGKTTYISALMKNTGCVFANDANK 384
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + + +I +L + + C
Sbjct: 385 ARTKSLIANIHRLGCKNTIVC 405
Score = 114 (45.2 bits), Expect = 9.2e-16, Sum P(3) = 9.2e-16
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 426 FDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKY------QRRMFDQAVQLV----RPG 475
FDRVLLDAPCS G+ A +E+++ R + Q+++ A+ V G
Sbjct: 419 FDRVLLDAPCSGTGV----IAKDESVKVSRTEKDFMQIPHLQKQLLLSAIDSVDAHSSTG 474
Query: 476 GIIVYSTCTINPGENEAL 493
G+IVYSTC+I ENEA+
Sbjct: 475 GVIVYSTCSIAVDENEAV 492
Score = 61 (26.5 bits), Expect = 9.2e-16, Sum P(3) = 9.2e-16
Identities = 29/96 (30%), Positives = 42/96 (43%)
Query: 2 DLSGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVI 61
D+ + YS L ++ F A + F + + RP IR NTLKT D+
Sbjct: 238 DICEYFGYSEFLA--DKLFNLFSPAEAMEFFE--ANEIARPIT---IRTNTLKTRRRDLA 290
Query: 62 QKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIP 97
Q L+ N G + + S K LQ I +SQ+P
Sbjct: 291 QALV----NKGVNLQPIGSWTKVGLQ---IFDSQVP 319
>UNIPROTKB|P76273 [details] [associations]
symbol:rsmF "16S rRNA m5C1407 methyltransferase"
species:83333 "Escherichia coli K-12" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0070475 "rRNA base methylation" evidence=IMP]
[GO:0009383 "rRNA (cytosine-C5-)-methyltransferase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
HAMAP:MF_01579 InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023545 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003723 GO:GO:0070475 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 GO:GO:0009383 PIR:C64945 RefSeq:NP_416349.2
RefSeq:YP_490097.1 PDB:2FRX PDBsum:2FRX ProteinModelPortal:P76273
SMR:P76273 PRIDE:P76273 EnsemblBacteria:EBESCT00000004750
EnsemblBacteria:EBESCT00000016770 GeneID:12930164 GeneID:946348
KEGG:ecj:Y75_p1811 KEGG:eco:b1835 PATRIC:32118991 EchoBASE:EB3777
EcoGene:EG14023 HOGENOM:HOG000218115 KO:K11392 OMA:VANEYSA
ProtClustDB:PRK11933 BioCyc:EcoCyc:G7008-MONOMER
BioCyc:ECOL316407:JW5301-MONOMER BioCyc:MetaCyc:G7008-MONOMER
EvolutionaryTrace:P76273 Genevestigator:P76273 Uniprot:P76273
Length = 479
Score = 155 (59.6 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 34/74 (45%), Positives = 45/74 (60%)
Query: 423 PNSFDRVLLDAPCSALGL-RPRLFAAEE-TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVY 480
P FD +LLDAPCS G+ R A + + +S + QR + D A +RPGG +VY
Sbjct: 185 PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVY 244
Query: 481 STCTINPGENEALC 494
STCT+N ENEA+C
Sbjct: 245 STCTLNQEENEAVC 258
Score = 110 (43.8 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 29/105 (27%), Positives = 53/105 (50%)
Query: 219 EGIAVDMHNR-IFQLPSFYDVLEGEIFLQNLPSIVTAHAL--DPQKGERILDMCAAPGGK 275
EG ++ N L S + L G ++Q S++ AL D +R++D+ AAPG K
Sbjct: 72 EGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSK 131
Query: 276 TTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
TT I++ + +EG ++A + S ++V + + G+ + D
Sbjct: 132 TTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFD 176
Score = 46 (21.3 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQ 62
F A RP S IRVNTLK + D +Q
Sbjct: 26 FDDFLAACQRPLRRS-IRVNTLKISVADFLQ 55
>UNIPROTKB|Q5HVD5 [details] [associations]
symbol:CJE0739 "NOL1/NOP2/sun family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF01189 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 RefSeq:YP_178750.1 ProteinModelPortal:Q5HVD5
STRING:Q5HVD5 GeneID:3230692 KEGG:cjr:CJE0739 PATRIC:20043207
OMA:YSEEVRK ProtClustDB:CLSK878876
BioCyc:CJEJ195099:GJC0-756-MONOMER Uniprot:Q5HVD5
Length = 279
Score = 136 (52.9 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 416 ENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPG 475
+N P FD++LLDAPCS F E++ + ++N K Q+++ A++ ++ G
Sbjct: 146 KNIGNLCPLKFDKILLDAPCSTFAKIG--FDLEKSYKEIKNIAKTQKKLLHSALKALKIG 203
Query: 476 GIIVYSTCTINPGENE 491
G +VYSTCT ENE
Sbjct: 204 GELVYSTCTFTKEENE 219
Score = 124 (48.7 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
E ++QN S + A L+ + G+R+LDMCAAPGGK+ +A+ +++ G + + S ++
Sbjct: 65 EAHFYIQNYSSYLCALNLEVKAGQRVLDMCAAPGGKSINLANFMQNTGYLACNEMSRDRF 124
Query: 300 MDIQKLAAEMGL 311
+QK G+
Sbjct: 125 FILQKNLKNYGV 136
>TIGR_CMR|CJE_0739 [details] [associations]
symbol:CJE_0739 "NOL1/NOP2/sun family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF01189 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 RefSeq:YP_178750.1 ProteinModelPortal:Q5HVD5
STRING:Q5HVD5 GeneID:3230692 KEGG:cjr:CJE0739 PATRIC:20043207
OMA:YSEEVRK ProtClustDB:CLSK878876
BioCyc:CJEJ195099:GJC0-756-MONOMER Uniprot:Q5HVD5
Length = 279
Score = 136 (52.9 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 416 ENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPG 475
+N P FD++LLDAPCS F E++ + ++N K Q+++ A++ ++ G
Sbjct: 146 KNIGNLCPLKFDKILLDAPCSTFAKIG--FDLEKSYKEIKNIAKTQKKLLHSALKALKIG 203
Query: 476 GIIVYSTCTINPGENE 491
G +VYSTCT ENE
Sbjct: 204 GELVYSTCTFTKEENE 219
Score = 124 (48.7 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
E ++QN S + A L+ + G+R+LDMCAAPGGK+ +A+ +++ G + + S ++
Sbjct: 65 EAHFYIQNYSSYLCALNLEVKAGQRVLDMCAAPGGKSINLANFMQNTGYLACNEMSRDRF 124
Query: 300 MDIQKLAAEMGL 311
+QK G+
Sbjct: 125 FILQKNLKNYGV 136
>TAIR|locus:2090054 [details] [associations]
symbol:AT3G13180 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0045036
"protein targeting to chloroplast" evidence=RCA] InterPro:IPR006027
Pfam:PF01029 Pfam:PF01189 EMBL:CP002686 GO:GO:0006355 GO:GO:0003723
GO:GO:0008168 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 Gene3D:1.10.940.10 SUPFAM:SSF48013 KO:K03500
HSSP:O50082 OMA:TSHPEWL EMBL:AY072189 EMBL:AY117322 EMBL:AK226254
IPI:IPI00520160 RefSeq:NP_187924.2 UniGene:At.39475
ProteinModelPortal:Q8VYC4 SMR:Q8VYC4 STRING:Q8VYC4 PRIDE:Q8VYC4
EnsemblPlants:AT3G13180.1 GeneID:820508 KEGG:ath:AT3G13180
TAIR:At3g13180 InParanoid:Q8VYC4 PhylomeDB:Q8VYC4
ProtClustDB:CLSN2690539 ArrayExpress:Q8VYC4 Genevestigator:Q8VYC4
InterPro:IPR023268 PRINTS:PR02009 Uniprot:Q8VYC4
Length = 523
Score = 144 (55.7 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 426 FDRVLLDAPCSALG-LRPRL-FAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTC 483
+D+VLLDAPCS LG L R ++ + K Q + D A +LV+ GG++VYSTC
Sbjct: 402 YDKVLLDAPCSGLGVLSKRADLRWNRKLEDMLELTKLQDELLDSASKLVKHGGVLVYSTC 461
Query: 484 TINPGENE 491
+I+P ENE
Sbjct: 462 SIDPEENE 469
Score = 124 (48.7 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 32/92 (34%), Positives = 50/92 (54%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ + + + PQ GERI+D CAAPGGKT +AS L+ +G + A+D + ++
Sbjct: 309 EGICSVQDESAGLIVSVVKPQPGERIMDACAAPGGKTLFMASCLKGQGMIYAMDVNEGRL 368
Query: 300 MDIQKLAAEMGLK-CITTYKLDALKAVRRKNE 330
+ + A + ITT D L+ NE
Sbjct: 369 RILGETAKSHQVDGLITTIHSD-LRVFAETNE 399
>UNIPROTKB|Q60343 [details] [associations]
symbol:trm4 "tRNA (cytosine(48)-C(5))-methyltransferase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0016428
"tRNA (cytosine-5-)-methyltransferase activity" evidence=IDA]
[GO:0030488 "tRNA methylation" evidence=IDA] InterPro:IPR011023
InterPro:IPR018314 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
GO:GO:0003723 EMBL:L77117 GenomeReviews:L77117_GR GO:GO:0006364
eggNOG:COG0144 GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 TIGRFAMs:TIGR00446 PIR:B64303 RefSeq:NP_246989.1
PDB:3A4T PDB:3AJD PDBsum:3A4T PDBsum:3AJD ProteinModelPortal:Q60343
GeneID:1450864 KEGG:mja:MJ_0026 OMA:NEPFFIA ProtClustDB:CLSK876038
EvolutionaryTrace:Q60343 Uniprot:Q60343
Length = 274
Score = 144 (55.7 bits), Expect = 6.4e-15, Sum P(3) = 6.4e-15
Identities = 31/90 (34%), Positives = 54/90 (60%)
Query: 222 AVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAS 281
A ++ F + S + L G Q++ S++ L+P++ + ILDMCAAPGGKTT +A
Sbjct: 44 AFEVKKSPFSIGSTPEYLFGYYMPQSISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQ 103
Query: 282 LLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311
L++++G +VAV+ S + ++ MG+
Sbjct: 104 LMKNKGTIVAVEISKTRTKALKSNINRMGV 133
Score = 107 (42.7 bits), Expect = 6.4e-15, Sum P(3) = 6.4e-15
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 426 FDRVLLDAPCSALGLRPR-LFAAEETIQ--SLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
FD++LLDAPCS ++ + +EE I+ SLR Q+ + D + L++ G +VYST
Sbjct: 157 FDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLR-----QKELIDIGIDLLKKDGELVYST 211
Query: 483 CTINPGENE 491
C++ ENE
Sbjct: 212 CSMEVEENE 220
Score = 39 (18.8 bits), Expect = 6.4e-15, Sum P(3) = 6.4e-15
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 48 IRVNTLKTTTDDVIQKLLAIIQNSG 72
IRVNTLK + V++K L +N G
Sbjct: 13 IRVNTLKINPE-VLKKRL---ENKG 33
>WB|WBGene00021073 [details] [associations]
symbol:nol-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040019 "positive regulation of embryonic
development" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040015
"negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040039 "inductive cell migration" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0000003 GO:GO:0003723 GO:GO:0040039 GO:GO:0040015
GO:GO:0040019 GO:GO:0032259 GO:GO:0006364 GO:GO:0008757
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 KO:K14835 TIGRFAMs:TIGR00446
GeneTree:ENSGT00660000095341 EMBL:FO081752 HSSP:O50082 PIR:D88022
PIR:T33803 RefSeq:NP_493742.1 ProteinModelPortal:Q9TYV5 SMR:Q9TYV5
STRING:Q9TYV5 PaxDb:Q9TYV5 EnsemblMetazoa:W07E6.1 GeneID:173437
KEGG:cel:CELE_W07E6.1 UCSC:W07E6.1 CTD:173437 WormBase:W07E6.1
InParanoid:Q9TYV5 OMA:SANLHRM NextBio:879655 Uniprot:Q9TYV5
Length = 664
Score = 142 (55.0 bits), Expect = 8.5e-15, Sum P(3) = 8.5e-15
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G +Q L S++ AL PQ G+R+LDMC+APGGKT+ IA+L+++ G + A D +
Sbjct: 281 EYLAGHYMIQGLNSLLPVMALAPQPGDRVLDMCSAPGGKTSHIAALMKNSGVLFANDANF 340
Query: 297 NK 298
+
Sbjct: 341 TR 342
Score = 130 (50.8 bits), Expect = 8.5e-15, Sum P(3) = 8.5e-15
Identities = 35/89 (39%), Positives = 50/89 (56%)
Query: 411 LGGRAENSKGFSPNSFDRVLLDAPCSALGL--RPRLFAAEETIQSLRNHGKYQRRMFDQA 468
LGG E SK PN FDR+LLDAPCS G+ + + + Q ++ QR++ A
Sbjct: 363 LGGE-EFSK-IRPNGFDRILLDAPCSGTGVIWKDQSVKTSKDSQDVQRRHTMQRQLILSA 420
Query: 469 VQLV---RP-GGIIVYSTCTINPGENEAL 493
+ + P GG +VYSTC++ ENEA+
Sbjct: 421 LDSLDANSPNGGYLVYSTCSVLVEENEAV 449
Score = 39 (18.8 bits), Expect = 8.5e-15, Sum P(3) = 8.5e-15
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 48 IRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIP 97
IR N+LK D+ + L+ N G + A K L + +SQ+P
Sbjct: 233 IRANSLKVKRRDLAKNLI----NRGMNVDPAADWTKVGL---VVYDSQVP 275
>SGD|S000005005 [details] [associations]
symbol:NOP2 "Probable RNA m(5)C methyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA;ISS] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;TAS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;TAS] [GO:0008173
"RNA methyltransferase activity" evidence=TAS] [GO:0030687
"preribosome, large subunit precursor" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 SGD:S000005005 Pfam:PF01189
GO:GO:0005730 EMBL:BK006947 GO:GO:0003723 GO:GO:0030687 EMBL:U12141
GO:GO:0006364 GO:GO:0008173 GO:GO:0008757 RefSeq:NP_014345.3
GeneID:855674 KEGG:sce:YNL053W KO:K11240 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 KO:K14835 TIGRFAMs:TIGR00446 OrthoDB:EOG40S3Q1
EMBL:X82656 EMBL:Z71337 EMBL:AY693060 EMBL:X83512 PIR:A55188
RefSeq:NP_014338.3 ProteinModelPortal:P40991 SMR:P40991
DIP:DIP-6488N IntAct:P40991 MINT:MINT-612803 STRING:P40991
PaxDb:P40991 PeptideAtlas:P40991 EnsemblFungi:YNL061W GeneID:855664
KEGG:sce:YNL061W CYGD:YNL061w GeneTree:ENSGT00660000095341
OMA:LIYANEM NextBio:979935 Genevestigator:P40991 GermOnline:YNL061W
Uniprot:P40991
Length = 618
Score = 136 (52.9 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 33/81 (40%), Positives = 47/81 (58%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--R 294
+ L G LQ S + ALDP + ERILDM AAPGGKTT I++++++ G V A D +
Sbjct: 321 EYLAGHYILQAASSFLPVIALDPHENERILDMAAAPGGKTTYISAMMKNTGCVFANDANK 380
Query: 295 SHNK--VMDIQKLAAEMGLKC 313
S K + +I +L + C
Sbjct: 381 SRTKSLIANIHRLGCTNTIVC 401
Score = 106 (42.4 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 426 FDRVLLDAPCSALGL--RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLV----RPGGIIV 479
FDR+LLDAPCS G+ + + T + Q+++ A+ V + GG+IV
Sbjct: 415 FDRILLDAPCSGTGVIGKDQSVKVSRTEKDFIQIPHLQKQLLLSAIDSVDCNSKHGGVIV 474
Query: 480 YSTCTINPGENEAL 493
YSTC++ E+EA+
Sbjct: 475 YSTCSVAVEEDEAV 488
Score = 65 (27.9 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 29/96 (30%), Positives = 43/96 (44%)
Query: 2 DLSGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVI 61
D+ + Y+P L ++ F A + F + + RP IR NTLKT D+
Sbjct: 234 DICEYFGYTPFLA--EKLFNLFSPAEAMEFFE--ANEIARPIT---IRTNTLKTRRRDLA 286
Query: 62 QKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIP 97
Q L+ N G + + S K LQ I +SQ+P
Sbjct: 287 QTLV----NRGVNLQPIGSWTKVGLQ---IFDSQVP 315
>DICTYBASE|DDB_G0281685 [details] [associations]
symbol:nol1 "NOL1/NOP2/Sun family protein"
species:44689 "Dictyostelium discoideum" [GO:0032259 "methylation"
evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR011023 InterPro:IPR023273 PRINTS:PR02012
dictyBase:DDB_G0281685 Pfam:PF01189 GenomeReviews:CM000152_GR
GO:GO:0003723 EMBL:AAFI02000042 GO:GO:0032259 GO:GO:0006364
GO:GO:0008757 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 KO:K14835 TIGRFAMs:TIGR00446 RefSeq:XP_640577.1
ProteinModelPortal:Q54TL4 STRING:Q54TL4 EnsemblProtists:DDB0237575
GeneID:8623185 KEGG:ddi:DDB_G0281685 InParanoid:Q54TL4 OMA:IEYLAGH
ProtClustDB:CLSZ2846781 Uniprot:Q54TL4
Length = 647
Score = 149 (57.5 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G+ Q+ S + AL PQ ER+LDMCA+PGGKTT IA+++++ G +VA D +
Sbjct: 334 EYLAGQYIQQSASSFLPVLALAPQPNERVLDMCASPGGKTTYIAAMMKNTGTLVANDVNK 393
Query: 297 NKVMDIQKLAAEMGLKCITTYKLD 320
+++ + +G+K LD
Sbjct: 394 DRIKSLVANIHRLGVKNCMVSNLD 417
Score = 108 (43.1 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 424 NSFDRVLLDAPCSALGL--RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLV---RP-GGI 477
+ FDRVL+DAPC LG+ + ++ Q + Q+ + +A+ V P GGI
Sbjct: 426 SGFDRVLVDAPCVGLGVISKDPQIKISKSEQDVITCTHTQKELLLKAIDSVDASSPTGGI 485
Query: 478 IVYSTCTINPGENEAL 493
IVYSTC++ ENEA+
Sbjct: 486 IVYSTCSLTVEENEAV 501
Score = 48 (22.0 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 325 VRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKE 359
+ + N SN+ N N+ +NN T++ S+ K K+
Sbjct: 599 INKSNNSNNN-NKSNNNNNNNNTTKLSNKKKETKK 632
Score = 47 (21.6 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 2 DLSGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKA--LTRPSCYSCIRVNTLKTTTDD 59
D+ + YS +W + E F++ + A +A RP IR NTLK D
Sbjct: 248 DICTYFGYS---QW---LAEVFLKIFNASEALEFFEANETHRPLT---IRANTLKVRRKD 298
Query: 60 VIQKLLA 66
+ + L+A
Sbjct: 299 LAEALIA 305
Score = 37 (18.1 bits), Expect = 3.5e-13, Sum P(3) = 3.5e-13
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 54 KTTTDDVIQKLLAIIQNSGSSEAD 77
K T VI I+Q S S E D
Sbjct: 33 KKVTKTVIPSKKPIVQESESEEED 56
>UNIPROTKB|G4MY77 [details] [associations]
symbol:MGG_01292 "Nucleolar protein NOP2" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 GO:GO:0003723
GO:GO:0030687 GO:GO:0032259 EMBL:CM001232 GO:GO:0006364
GO:GO:0008757 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
KO:K14835 TIGRFAMs:TIGR00446 RefSeq:XP_003714215.1
ProteinModelPortal:G4MY77 EnsemblFungi:MGG_01292T0 GeneID:2679573
KEGG:mgr:MGG_01292 Uniprot:G4MY77
Length = 678
Score = 139 (54.0 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
Identities = 32/81 (39%), Positives = 47/81 (58%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G LQ S + AL PQ+ ER+LDM AAPGGKTT A+L+++ G ++A D
Sbjct: 364 EYLGGHYILQAASSFLPVMALCPQENERVLDMSAAPGGKTTHCAALMKNTGVIIANDPNK 423
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
RS + +I +L + + C
Sbjct: 424 ARSKGLIGNIHRLGVKNSIVC 444
Score = 116 (45.9 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 426 FDRVLLDAPCSALGL--RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTC 483
FDRVLLDAPCS G+ + +T + Q+++ A+ + GG IVYSTC
Sbjct: 458 FDRVLLDAPCSGTGVISKDPSVKTNKTEKDFMQLPHVQKQLLLAAIDATKVGGYIVYSTC 517
Query: 484 TINPGENE 491
++ ENE
Sbjct: 518 SVTVEENE 525
Score = 47 (21.6 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 48 IRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIP 97
IR NTL+T+ D+ Q L+ N G + V K LQ I +S +P
Sbjct: 316 IRTNTLRTSRRDLAQALV----NRGVTLEPVGKWSKVGLQ---IFDSNVP 358
>TIGR_CMR|SO_2215 [details] [associations]
symbol:SO_2215 "sun protein, putative" species:211586
"Shewanella oneidensis MR-1" [GO:0001510 "RNA methylation"
evidence=ISS] [GO:0016434 "rRNA (cytosine) methyltransferase
activity" evidence=ISS] Pfam:PF01189 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008168 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 KO:K03500 HOGENOM:HOG000037301
RefSeq:NP_717812.1 ProteinModelPortal:Q8EEZ4 GeneID:1169952
KEGG:son:SO_2215 PATRIC:23524061 OMA:GWFEQQD ProtClustDB:CLSK906636
Uniprot:Q8EEZ4
Length = 404
Score = 121 (47.7 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 206 TAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERI 265
T +S + + V + +F+ SF EG Q+ S A ALD + G R+
Sbjct: 173 TEFVSTQVVDSVDSALEVTSDSALFRTNSFK---EGLFEQQDAGSQRVAAALDAKPGMRV 229
Query: 266 LDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
+D CA GGKT IA+ ++ +G ++A+D K+ ++++ A G I T + K +
Sbjct: 230 IDACAGAGGKTLHIAAQMQGKGRLLAMDVEQWKLDNLKERARRNGAHNIETRLIVGSKTI 289
Query: 326 RR 327
+R
Sbjct: 290 KR 291
Score = 118 (46.6 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 427 DRVLLDAPCSALGLRPRLFAAE--ETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCT 484
DRVLLD PCS LG+ R A+ +T L + Q+ + ++V+ GGI+VY+TC+
Sbjct: 297 DRVLLDVPCSGLGVLKRNPDAKWRDTADRLPVLMELQKHILSSYSRMVKVGGIVVYATCS 356
Query: 485 INPGEN 490
I P EN
Sbjct: 357 IFPCEN 362
Score = 55 (24.4 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 38 ALTRPSCYSCIRVNTLKTTTDDVIQKL 64
AL RP +RVN LK + D+++QKL
Sbjct: 146 ALNRPP-KRFLRVNGLKVSRDELVQKL 171
>UNIPROTKB|Q9KVU5 [details] [associations]
symbol:rsmB "Ribosomal RNA small subunit methyltransferase
B" species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR004573
InterPro:IPR006027 InterPro:IPR018314 Pfam:PF01029 PROSITE:PS01153
Pfam:PF01189 GO:GO:0005737 GO:GO:0006355 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0031167 GO:GO:0008649
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 KO:K03500 OMA:KPPMWLR
ProtClustDB:PRK10901 TIGRFAMs:TIGR00563 PIR:G82372
RefSeq:NP_229703.1 ProteinModelPortal:Q9KVU5 SMR:Q9KVU5
PRIDE:Q9KVU5 DNASU:2614440 GeneID:2614440 KEGG:vch:VC0044
PATRIC:20079136 Uniprot:Q9KVU5
Length = 434
Score = 128 (50.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 426 FDRVLLDAPCSALGL---RPRL--FAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVY 480
FDR+LLDAPCSA G+ P + + I +L + QR + D Q ++PGG +VY
Sbjct: 321 FDRILLDAPCSATGVIRRHPDIKWLRRADDIAAL---AELQREILDAMWQQLKPGGSLVY 377
Query: 481 STCTINPGEN 490
+TC+I P EN
Sbjct: 378 ATCSITPQEN 387
Score = 126 (49.4 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 34/103 (33%), Positives = 55/103 (53%)
Query: 207 AMMSRAGIF-----RASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQK 261
A++ +AGI +A + + ++ + QLP F EG + +Q+ + + L PQ
Sbjct: 195 ALLEQAGIVTTPHAQAEDALCLETPCDVHQLPGF---AEGWVSVQDAAAQLALTYLAPQA 251
Query: 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
GE ILD CAAPGGKT I E +VVA+D ++ +++
Sbjct: 252 GELILDCCAAPGGKTAHILERT-PESQVVAIDCDETRLKRVRE 293
>TIGR_CMR|VC_0044 [details] [associations]
symbol:VC_0044 "sun protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR004573 InterPro:IPR006027 InterPro:IPR018314
Pfam:PF01029 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
GO:GO:0006355 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003723
GO:GO:0031167 GO:GO:0008649 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 Gene3D:1.10.940.10
SUPFAM:SSF48013 KO:K03500 OMA:KPPMWLR ProtClustDB:PRK10901
TIGRFAMs:TIGR00563 PIR:G82372 RefSeq:NP_229703.1
ProteinModelPortal:Q9KVU5 SMR:Q9KVU5 PRIDE:Q9KVU5 DNASU:2614440
GeneID:2614440 KEGG:vch:VC0044 PATRIC:20079136 Uniprot:Q9KVU5
Length = 434
Score = 128 (50.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 426 FDRVLLDAPCSALGL---RPRL--FAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVY 480
FDR+LLDAPCSA G+ P + + I +L + QR + D Q ++PGG +VY
Sbjct: 321 FDRILLDAPCSATGVIRRHPDIKWLRRADDIAAL---AELQREILDAMWQQLKPGGSLVY 377
Query: 481 STCTINPGEN 490
+TC+I P EN
Sbjct: 378 ATCSITPQEN 387
Score = 126 (49.4 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 34/103 (33%), Positives = 55/103 (53%)
Query: 207 AMMSRAGIF-----RASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQK 261
A++ +AGI +A + + ++ + QLP F EG + +Q+ + + L PQ
Sbjct: 195 ALLEQAGIVTTPHAQAEDALCLETPCDVHQLPGF---AEGWVSVQDAAAQLALTYLAPQA 251
Query: 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
GE ILD CAAPGGKT I E +VVA+D ++ +++
Sbjct: 252 GELILDCCAAPGGKTAHILERT-PESQVVAIDCDETRLKRVRE 293
>ZFIN|ZDB-GENE-050309-7 [details] [associations]
symbol:nop2 "NOP2 nucleolar protein homolog (yeast)"
species:7955 "Danio rerio" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 ZFIN:ZDB-GENE-050309-7
GO:GO:0003723 GO:GO:0032259 GO:GO:0006364 GO:GO:0008757
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 CTD:4839
KO:K14835 TIGRFAMs:TIGR00446 GeneTree:ENSGT00660000095341
EMBL:CR936322 IPI:IPI00898205 RefSeq:XP_001922354.1
UniGene:Dr.159549 UniGene:Dr.77944 Ensembl:ENSDART00000114272
Ensembl:ENSDART00000130222 GeneID:321130 KEGG:dre:321130
NextBio:20807245 Uniprot:F1QWP7
Length = 739
Score = 149 (57.5 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 35/81 (43%), Positives = 47/81 (58%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA----V 292
+ L G LQ S + AL PQ+GE +LDM AAPGGKTT +A L+R+ G +VA V
Sbjct: 358 EYLAGHYMLQGASSFLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGMIVANDANV 417
Query: 293 DRSHNKVMDIQKLAAEMGLKC 313
DR + V +I +L + C
Sbjct: 418 DRLKSVVGNIHRLGVTNAVIC 438
Score = 103 (41.3 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 426 FDRVLLDAPCSALGL---RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLV----RPGGII 478
FDRVLLDAPCS G+ P + ++ LR+ Q+ + A+ V + GG +
Sbjct: 452 FDRVLLDAPCSGTGVISKDPAVKTGKDEADILRS-AHLQKELILSAIDSVNADSQTGGYL 510
Query: 479 VYSTCTINPGENE 491
VY TC+I ENE
Sbjct: 511 VYCTCSIMVEENE 523
Score = 46 (21.3 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 48 IRVNTLKTTTDDVIQKLL 65
IR NTLKT D+ Q L+
Sbjct: 310 IRTNTLKTRRRDLAQALI 327
>UNIPROTKB|Q0BWV2 [details] [associations]
symbol:HNE_3368 "Putative ribosomal RNA small subunit
methyltransferase B" species:228405 "Hyphomonas neptunium ATCC
15444" [GO:0000154 "rRNA modification" evidence=ISS] [GO:0016434
"rRNA (cytosine) methyltransferase activity" evidence=ISS]
InterPro:IPR006027 Pfam:PF01029 Pfam:PF01189 GO:GO:0006355
GO:GO:0003723 EMBL:CP000158 GenomeReviews:CP000158_GR
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 KO:K03500 HOGENOM:HOG000037302
RefSeq:YP_762041.1 ProteinModelPortal:Q0BWV2 STRING:Q0BWV2
GeneID:4290149 KEGG:hne:HNE_3368 PATRIC:32219615 OMA:VPDHSAV
ProtClustDB:CLSK2532062 BioCyc:HNEP228405:GI69-3370-MONOMER
GO:GO:0016434 Uniprot:Q0BWV2
Length = 423
Score = 139 (54.0 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 38/110 (34%), Positives = 59/110 (53%)
Query: 203 GQGTAMMSRAGIFRASEGIAVDM-HNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQK 261
G G + G +G A+D+ + LP + G+ ++Q+ + + A L PQ
Sbjct: 179 GDGARVAEATGGTLLPDG-AIDIVSGAVETLPGY---AAGDWWVQDAAARIPAQLLSPQT 234
Query: 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311
GERILD+CAAPGGKT +A+ D V A+DRS ++ +++ A GL
Sbjct: 235 GERILDLCAAPGGKTLQLAAAGAD---VTALDRSRPRLERLKENLARTGL 281
Score = 109 (43.4 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 423 PNSFDRVLLDAPCSALG-LRPRLFAAE-ETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVY 480
P F ++LLDAPCSALG LR +A +T + Q R+ A ++ PGG +VY
Sbjct: 296 PALFPKILLDAPCSALGTLRRHPESAWIKTEDDVARFPGVQARLLAAAAGMLAPGGTLVY 355
Query: 481 STCTINPGE 489
CT P E
Sbjct: 356 CVCTPVPAE 364
>POMBASE|SPBP8B7.20c [details] [associations]
symbol:SPBP8B7.20c "RNA methyltransferase Nop2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0008173 "RNA methyltransferase activity"
evidence=ISO] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0031167 "rRNA
methylation" evidence=ISO] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153
PomBase:SPBP8B7.20c Pfam:PF01189 GO:GO:0005730 EMBL:CU329671
GO:GO:0003723 GO:GO:0008173 GO:GO:0008757 GO:GO:0031167
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 KO:K14835 TIGRFAMs:TIGR00446 HSSP:Q96P11
PIR:T40814 RefSeq:NP_596527.1 ProteinModelPortal:O94268
STRING:O94268 PRIDE:O94268 EnsemblFungi:SPBP8B7.20c.1
GeneID:2541274 KEGG:spo:SPBP8B7.20c OMA:TRMLEIV OrthoDB:EOG40S3Q1
NextBio:20802386 Uniprot:O94268
Length = 608
Score = 123 (48.4 bits), Expect = 4.8e-13, Sum P(3) = 4.8e-13
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--R 294
+ L G LQ S + AL PQ ERILDM +APGGK T +A+L ++ G + A D +
Sbjct: 315 EYLAGHYILQAASSFLPVMALAPQPNERILDMSSAPGGKVTYVAALQKNTGIIFANDSNK 374
Query: 295 SHNKVM--DIQKLAAEMGLKC 313
+ K + +I +L + C
Sbjct: 375 ARTKALSANIHRLGVRNAIVC 395
Score = 112 (44.5 bits), Expect = 4.8e-13, Sum P(3) = 4.8e-13
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 426 FDRVLLDAPCSALGL--RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLV----RPGGIIV 479
FDRVLLDAPCS G+ + + ++ + QR++ A+ V + GG IV
Sbjct: 410 FDRVLLDAPCSGTGVIYKDQSVKTNKSERDFDTLSHLQRQLLLSAIDSVNADSKTGGFIV 469
Query: 480 YSTCTINPGENEAL 493
YSTC+I E+EA+
Sbjct: 470 YSTCSITVDEDEAV 483
Score = 59 (25.8 bits), Expect = 4.8e-13, Sum P(3) = 4.8e-13
Identities = 28/96 (29%), Positives = 42/96 (43%)
Query: 2 DLSGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVI 61
D+ Y YS L ++ E F + + F + + RP IR NTLKT ++
Sbjct: 228 DICAYYGYSRFLA--EKLFELFSVSEAVEFFE--ANEMPRPVT---IRTNTLKTQRRELA 280
Query: 62 QKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIP 97
Q L+ N G + + K LQ + ESQ+P
Sbjct: 281 QALI----NRGVNLEPIGKWSKVGLQ---VFESQVP 309
>TAIR|locus:2178393 [details] [associations]
symbol:OLI2 "OLIGOCELLULA 2" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006457 "protein folding" evidence=RCA] [GO:0009408 "response
to heat" evidence=RCA] [GO:0009644 "response to high light
intensity" evidence=RCA] [GO:0034976 "response to endoplasmic
reticulum stress" evidence=RCA] [GO:0042542 "response to hydrogen
peroxide" evidence=RCA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
GO:GO:0005829 EMBL:CP002688 GO:GO:0008283 GO:GO:0003723
GO:GO:0009965 GO:GO:0006364 GO:GO:0008757 EMBL:AB026659
GO:GO:0010015 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 KO:K14835 TIGRFAMs:TIGR00446 OMA:LIYANEM
HSSP:O50082 ProtClustDB:CLSN2690331 IPI:IPI00527551
RefSeq:NP_850927.1 UniGene:At.43081 ProteinModelPortal:Q9FG73
SMR:Q9FG73 STRING:Q9FG73 PRIDE:Q9FG73 EnsemblPlants:AT5G55920.1
GeneID:835690 KEGG:ath:AT5G55920 TAIR:At5g55920 InParanoid:Q9FG73
PhylomeDB:Q9FG73 Genevestigator:Q9FG73 Uniprot:Q9FG73
Length = 682
Score = 130 (50.8 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 33/87 (37%), Positives = 48/87 (55%)
Query: 413 GRAENSKGFSPNSFDRVLLDAPCSALGL--RPRLFAAEETIQSLRNHGKYQRRMFDQAVQ 470
GR E K N+ DRVLLDAPCS G+ + +T+ ++ Q+++ A+
Sbjct: 419 GR-ELPKVLGQNTVDRVLLDAPCSGTGIISKDESVKITKTMDEIKKFAHLQKQLLLAAID 477
Query: 471 LV----RPGGIIVYSTCTINPGENEAL 493
+V + GG IVYSTC+I ENEA+
Sbjct: 478 MVDANSKTGGYIVYSTCSIMVTENEAV 504
Score = 123 (48.4 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S + AL P++ ERI+D+ AAPGGKTT IA+L+++ G + A +
Sbjct: 335 EYLAGYYMLQGASSFLPVMALAPRENERIVDVAAAPGGKTTYIAALMKNTGLIYA---NE 391
Query: 297 NKVMDIQKLAAEM 309
KV ++ L A +
Sbjct: 392 MKVPRLKSLTANL 404
Score = 42 (19.8 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 48 IRVNTLKTTTDDVIQKLL 65
IR NTLKT D+ LL
Sbjct: 287 IRTNTLKTRRRDLADVLL 304
>TIGR_CMR|CHY_1481 [details] [associations]
symbol:CHY_1481 "sun protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0000154 "rRNA
modification" evidence=ISS] [GO:0008649 "rRNA methyltransferase
activity" evidence=ISS] InterPro:IPR004573 InterPro:IPR006027
Pfam:PF01029 Pfam:PF01189 GO:GO:0005737 GO:GO:0006355 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0031167 GO:GO:0008649
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 HOGENOM:HOG000037300 KO:K03500
OMA:KPPMWLR TIGRFAMs:TIGR00563 RefSeq:YP_360313.1
ProteinModelPortal:Q3AC21 STRING:Q3AC21 GeneID:3726975
KEGG:chy:CHY_1481 PATRIC:21276093
BioCyc:CHYD246194:GJCN-1480-MONOMER Uniprot:Q3AC21
Length = 440
Score = 129 (50.5 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 32/105 (30%), Positives = 58/105 (55%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
EG+ + + +LP YD EG ++Q+ S+ A+ ++P+ +D CAAPGGK+T
Sbjct: 209 EGVVILDKVGVKELPG-YD--EGLFYIQDTGSMFIAYLINPEPNSVGIDACAAPGGKSTH 265
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
+A L+ ++G + A D ++ I++ A +G+ I DA +
Sbjct: 266 LAQLMGNKGIIYAFDVHPGRLKLIEENAHRLGINIIRCLLGDATR 310
Score = 119 (46.9 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 409 QCLGGRAENSK---GFSPNSFDRVLLDAPCSALGLRPRLFAA--EETIQSLRNHGKYQRR 463
+CL G A K G +PN +L D PCS G+ R A +++ + + +YQ
Sbjct: 302 RCLLGDATRLKLPDGVNPNW---ILADVPCSGTGVLARKPDARWQKSEEEIIKLSQYQLE 358
Query: 464 MFDQAVQLVRPGGIIVYSTCTINPGENEAL 493
+ +L+ P GI+VYSTC+I P ENE +
Sbjct: 359 ILTNLSKLLPPEGILVYSTCSIEPEENEGV 388
>ASPGD|ASPL0000013404 [details] [associations]
symbol:AN8073 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
GO:GO:0003723 EMBL:BN001302 GO:GO:0030687 GO:GO:0006364
GO:GO:0008757 EMBL:AACD01000139 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HOGENOM:HOG000224258 KO:K14835
TIGRFAMs:TIGR00446 OrthoDB:EOG40S3Q1 RefSeq:XP_681342.1
ProteinModelPortal:Q5AUF7 STRING:Q5AUF7
EnsemblFungi:CADANIAT00004099 GeneID:2869314 KEGG:ani:AN8073.2
OMA:LEPVGKW Uniprot:Q5AUF7
Length = 788
Score = 145 (56.1 bits), Expect = 5.3e-13, Sum P(3) = 5.3e-13
Identities = 36/88 (40%), Positives = 48/88 (54%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S + AL PQ+ ERILDM +APGGKTT I++L+R+ G V+A D S
Sbjct: 365 EYLAGHYILQAASSFLPVMALAPQENERILDMASAPGGKTTYISALMRNTGCVIANDASK 424
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALKA 324
+ + +G K LDA A
Sbjct: 425 PRAKGLIGNIHRLGCKNTIVTNLDARTA 452
Score = 111 (44.1 bits), Expect = 5.3e-13, Sum P(3) = 5.3e-13
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 426 FDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKY------QRRMFDQAVQLV----RPG 475
FDRVLLDAPC+ G+ A + ++++ +N + QR++ A+ V + G
Sbjct: 460 FDRVLLDAPCTGTGV----IAKDPSVKTNKNERDFLAIPHMQRQLLLAAIDSVNHASKTG 515
Query: 476 GIIVYSTCTINPGENEAL 493
G IVYSTC++ ENEA+
Sbjct: 516 GYIVYSTCSVTVEENEAV 533
Score = 40 (19.1 bits), Expect = 5.3e-13, Sum P(3) = 5.3e-13
Identities = 28/97 (28%), Positives = 38/97 (39%)
Query: 2 DLSGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALT-RPSCYSCIRVNTLKTTTDDV 60
D+ Y Y+P L E+ F + F+ T RP IR NTL+T +
Sbjct: 278 DICTYYGYTPFL-----AEKLFNLFTPMEAFAFFEANETPRPVV---IRTNTLRTNRRSL 329
Query: 61 IQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIP 97
Q L+ N G V K LQ + ES +P
Sbjct: 330 AQALI----NRGVVLEPVGKWSKVGLQ---VFESAVP 359
>UNIPROTKB|F1NH85 [details] [associations]
symbol:Gga.5513 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
GO:GO:0003723 GO:GO:0032259 GO:GO:0006364 GO:GO:0008757
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 GeneTree:ENSGT00660000095341 EMBL:AADN02061143
IPI:IPI00822637 Ensembl:ENSGALT00000023326 ArrayExpress:F1NH85
Uniprot:F1NH85
Length = 549
Score = 143 (55.4 bits), Expect = 8.2e-13, Sum P(3) = 8.2e-13
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S++ AL PQ+ ERILDMC APGGKT+ IA L+++ G ++A D +
Sbjct: 325 EYLAGHYMLQGASSLLPVMALAPQENERILDMCCAPGGKTSYIAQLMKNTGMILANDSNA 384
Query: 297 NKVMDI 302
++ +
Sbjct: 385 ERLRSV 390
Score = 99 (39.9 bits), Expect = 8.2e-13, Sum P(3) = 8.2e-13
Identities = 29/73 (39%), Positives = 37/73 (50%)
Query: 426 FDRVLLDAPCSALGL---RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRP----GGII 478
FDRVLLDAPCS G+ P + ++ LR Q+ + A+ V GG I
Sbjct: 419 FDRVLLDAPCSGTGVISKDPAIKTNKDEKDILRC-AHLQKELLLSAIDSVNATSETGGYI 477
Query: 479 VYSTCTINPGENE 491
VY TC+I ENE
Sbjct: 478 VYCTCSITVEENE 490
Score = 46 (21.3 bits), Expect = 8.2e-13, Sum P(3) = 8.2e-13
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 48 IRVNTLKTTTDDVIQKLL 65
IR NTLKT D+ Q L+
Sbjct: 277 IRTNTLKTRRRDLAQALI 294
>TIGR_CMR|SPO_3376 [details] [associations]
symbol:SPO_3376 "ribosomal RNA small subunit
methyltransferase B, putative" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0000154 "rRNA modification" evidence=ISS] [GO:0016434
"rRNA (cytosine) methyltransferase activity" evidence=ISS]
InterPro:IPR006027 Pfam:PF01029 Pfam:PF01189 GO:GO:0006355
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003723 GO:GO:0008168
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 KO:K03500 HOGENOM:HOG000037302
OMA:VPDHSAV RefSeq:YP_168572.1 ProteinModelPortal:Q5LN36
GeneID:3195741 KEGG:sil:SPO3376 PATRIC:23380205
ProtClustDB:CLSK934144 Uniprot:Q5LN36
Length = 423
Score = 132 (51.5 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 35/104 (33%), Positives = 57/104 (54%)
Query: 222 AVDMHN--RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
+V +H+ ++ LP F G+ ++Q+ + + LDPQ GE +LD+CAAPGGKT +
Sbjct: 190 SVRLHDAGQVSALPGF---AAGDWWVQDAAAALPVQLLDPQPGESVLDLCAAPGGKTMQL 246
Query: 280 ASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
A+ V A+D S ++ +++ A GL T DAL+
Sbjct: 247 AAA---GARVTALDISEGRMARVRENLARTGLSAETVVG-DALE 286
Score = 109 (43.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 30/69 (43%), Positives = 41/69 (59%)
Query: 426 FDRVLLDAPCSALG-LR--PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
+D VLLDAPCSA G +R P L A++ + + Q +M A LVRPGG +V+ T
Sbjct: 291 YDAVLLDAPCSATGTIRRHPDLPLAKDGSE-FGALIELQAQMIAHAWTLVRPGGRMVFCT 349
Query: 483 CTINPGENE 491
C++ P E E
Sbjct: 350 CSLLPDEGE 358
>UNIPROTKB|F1NK16 [details] [associations]
symbol:Gga.5513 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005730
GO:GO:0003723 GO:GO:0032259 GO:GO:0006364 GO:GO:0008757
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 OMA:DLQRVHK
TIGRFAMs:TIGR00446 GeneTree:ENSGT00660000095341 EMBL:AADN02061143
IPI:IPI00575969 Ensembl:ENSGALT00000037120 ArrayExpress:F1NK16
Uniprot:F1NK16
Length = 722
Score = 143 (55.4 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S++ AL PQ+ ERILDMC APGGKT+ IA L+++ G ++A D +
Sbjct: 401 EYLAGHYMLQGASSLLPVMALAPQENERILDMCCAPGGKTSYIAQLMKNTGMILANDSNA 460
Query: 297 NKVMDI 302
++ +
Sbjct: 461 ERLRSV 466
Score = 99 (39.9 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 29/73 (39%), Positives = 37/73 (50%)
Query: 426 FDRVLLDAPCSALGL---RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRP----GGII 478
FDRVLLDAPCS G+ P + ++ LR Q+ + A+ V GG I
Sbjct: 495 FDRVLLDAPCSGTGVISKDPAIKTNKDEKDILRC-AHLQKELLLSAIDSVNATSETGGYI 553
Query: 479 VYSTCTINPGENE 491
VY TC+I ENE
Sbjct: 554 VYCTCSITVEENE 566
Score = 46 (21.3 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 48 IRVNTLKTTTDDVIQKLL 65
IR NTLKT D+ Q L+
Sbjct: 353 IRTNTLKTRRRDLAQALI 370
>UNIPROTKB|Q8EDY2 [details] [associations]
symbol:rsmF "Ribosomal RNA small subunit methyltransferase
F" species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01579 InterPro:IPR011023 InterPro:IPR023545
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737 GO:GO:0003723
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 HSSP:Q96P11 HOGENOM:HOG000218115 KO:K11392
OMA:VANEYSA ProtClustDB:PRK11933 RefSeq:NP_718194.1
ProteinModelPortal:Q8EDY2 SMR:Q8EDY2 GeneID:1170311
KEGG:son:SO_2609 PATRIC:23524845 Uniprot:Q8EDY2
Length = 474
Score = 129 (50.5 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 425 SFDRVLLDAPCSALG-LRPRLFAAEE-TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
SFD VL+DAPC G +R + A + ++ + + Q+ + + A ++PGG +VYST
Sbjct: 181 SFDAVLIDAPCGGEGTVRKDVDALKSWSLDEVIAISETQKALIESAFLALKPGGSLVYST 240
Query: 483 CTINPGENEALC 494
CT+N EN+ +C
Sbjct: 241 CTLNRHENQGVC 252
Score = 105 (42.0 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 28/90 (31%), Positives = 50/90 (55%)
Query: 231 QLPSFYDVLEGEIFLQNLPSIVTAHAL-DPQKG-ERILDMCAAPGGKTTAIASLLRDEGE 288
QL + + ++G ++Q S++ AL P + +LD+ AAPG KTT +A+L+ ++G
Sbjct: 79 QLGNALEHIQGLFYIQEASSMLPPTALFTPNADWQCVLDLAAAPGSKTTQMAALMNNQGL 138
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLK-CITTY 317
+VA + S ++V + MG C T+
Sbjct: 139 LVANEYSASRVKVLHANVLRMGASHCALTH 168
Score = 45 (20.9 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 38 ALTRPSCYSCIRVNTLKTTTDD 59
A RP S IRVNTLK +++D
Sbjct: 28 ACARPLRRS-IRVNTLKISSED 48
>TIGR_CMR|SO_2609 [details] [associations]
symbol:SO_2609 "NOL1/NOP2/sun family protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_01579 InterPro:IPR011023 InterPro:IPR023545
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737 GO:GO:0003723
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 HSSP:Q96P11 HOGENOM:HOG000218115 KO:K11392
OMA:VANEYSA ProtClustDB:PRK11933 RefSeq:NP_718194.1
ProteinModelPortal:Q8EDY2 SMR:Q8EDY2 GeneID:1170311
KEGG:son:SO_2609 PATRIC:23524845 Uniprot:Q8EDY2
Length = 474
Score = 129 (50.5 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 425 SFDRVLLDAPCSALG-LRPRLFAAEE-TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
SFD VL+DAPC G +R + A + ++ + + Q+ + + A ++PGG +VYST
Sbjct: 181 SFDAVLIDAPCGGEGTVRKDVDALKSWSLDEVIAISETQKALIESAFLALKPGGSLVYST 240
Query: 483 CTINPGENEALC 494
CT+N EN+ +C
Sbjct: 241 CTLNRHENQGVC 252
Score = 105 (42.0 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 28/90 (31%), Positives = 50/90 (55%)
Query: 231 QLPSFYDVLEGEIFLQNLPSIVTAHAL-DPQKG-ERILDMCAAPGGKTTAIASLLRDEGE 288
QL + + ++G ++Q S++ AL P + +LD+ AAPG KTT +A+L+ ++G
Sbjct: 79 QLGNALEHIQGLFYIQEASSMLPPTALFTPNADWQCVLDLAAAPGSKTTQMAALMNNQGL 138
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLK-CITTY 317
+VA + S ++V + MG C T+
Sbjct: 139 LVANEYSASRVKVLHANVLRMGASHCALTH 168
Score = 45 (20.9 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 38 ALTRPSCYSCIRVNTLKTTTDD 59
A RP S IRVNTLK +++D
Sbjct: 28 ACARPLRRS-IRVNTLKISSED 48
>UNIPROTKB|Q0P5D8 [details] [associations]
symbol:NSUN3 "Putative methyltransferase NSUN3"
species:9913 "Bos taurus" [GO:0008168 "methyltransferase activity"
evidence=IEA] PROSITE:PS01153 Pfam:PF01189 GO:GO:0008168
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
GeneTree:ENSGT00660000095341 EMBL:BC120181 IPI:IPI00710512
RefSeq:NP_001069469.1 UniGene:Bt.37882 ProteinModelPortal:Q0P5D8
PRIDE:Q0P5D8 Ensembl:ENSBTAT00000020876 GeneID:533791
KEGG:bta:533791 CTD:63899 HOGENOM:HOG000017426 HOVERGEN:HBG106892
InParanoid:Q0P5D8 OMA:NRFNYPF OrthoDB:EOG4GMTX6 NextBio:20876149
Uniprot:Q0P5D8
Length = 338
Score = 137 (53.3 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 423 PNSFDRVLLDAPCSALGLRPRLFAAEET-----IQSLRNHGKYQRRMFDQAVQLVRPGGI 477
P +FD+VL+DAPCS R LF+++ I RN Q + A++ +RPGG+
Sbjct: 203 PETFDKVLVDAPCS--NDRSWLFSSDSQKAACRISQRRNLPLLQMELLRSAIKALRPGGL 260
Query: 478 IVYSTCTINPGENE 491
+VYSTCT++ EN+
Sbjct: 261 LVYSTCTLSKAENQ 274
Score = 94 (38.1 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
+L N S++ AL+ + GE++LD+CAAPGGK+ A+
Sbjct: 115 YLLNAASLLPVLALELRDGEKVLDLCAAPGGKSLAL 150
Score = 38 (18.4 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 20 EEYFIRAYGADHFSRISKALTRPSCY 45
E+ + + G D ++ + LT PSC+
Sbjct: 27 EKQYSKELG-DAWNTVRDILTSPSCW 51
>UNIPROTKB|Q9H649 [details] [associations]
symbol:NSUN3 "Putative methyltransferase NSUN3"
species:9606 "Homo sapiens" [GO:0008168 "methyltransferase
activity" evidence=IEA] PROSITE:PS01153 Pfam:PF01189 GO:GO:0008168
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
CTD:63899 HOGENOM:HOG000017426 HOVERGEN:HBG106892 OMA:NRFNYPF
OrthoDB:EOG4GMTX6 EMBL:AK025762 EMBL:AK026262 EMBL:AF169972
EMBL:BC020602 EMBL:BC057238 EMBL:AF351612 IPI:IPI00004969
RefSeq:NP_071355.1 UniGene:Hs.448003 ProteinModelPortal:Q9H649
SMR:Q9H649 STRING:Q9H649 PhosphoSite:Q9H649 DMDM:74733593
PRIDE:Q9H649 DNASU:63899 Ensembl:ENST00000314622 GeneID:63899
KEGG:hsa:63899 UCSC:uc003drl.1 GeneCards:GC03P093781
HGNC:HGNC:26208 HPA:HPA036181 neXtProt:NX_Q9H649
PharmGKB:PA134961151 InParanoid:Q9H649 PhylomeDB:Q9H649
GenomeRNAi:63899 NextBio:65598 ArrayExpress:Q9H649 Bgee:Q9H649
CleanEx:HS_NSUN3 Genevestigator:Q9H649 Uniprot:Q9H649
Length = 340
Score = 135 (52.6 bits), Expect = 7.4e-12, Sum P(3) = 7.4e-12
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 423 PNSFDRVLLDAPCSALGLRPRLFAAEET-----IQSLRNHGKYQRRMFDQAVQLVRPGGI 477
P FD+VL+DAPCS R LF+++ I RN Q + A++ +RPGGI
Sbjct: 202 PEMFDKVLVDAPCS--NDRSWLFSSDSQKASCRISQRRNLPLLQIELLRSAIKALRPGGI 259
Query: 478 IVYSTCTINPGENE 491
+VYSTCT++ EN+
Sbjct: 260 LVYSTCTLSKAENQ 273
Score = 94 (38.1 bits), Expect = 7.4e-12, Sum P(3) = 7.4e-12
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
+L N S++ AL+ + GE++LD+CAAPGGK+ A+
Sbjct: 114 YLLNAASLLPVLALELRDGEKVLDLCAAPGGKSIAL 149
Score = 40 (19.1 bits), Expect = 7.4e-12, Sum P(3) = 7.4e-12
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 20 EEYFIRAYGADHFSRISKALTRPSCY 45
E+ + + G D ++ + + LT PSC+
Sbjct: 26 EKQYSKELG-DAWNTVREILTSPSCW 50
>RGD|1304616 [details] [associations]
symbol:Nop2 "NOP2 nucleolar protein" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
RGD:1304616 GO:GO:0005730 GO:GO:0003723 GO:GO:0032259 GO:GO:0006364
GO:GO:0008757 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 OrthoDB:EOG4RJG1H GeneTree:ENSGT00660000095341
IPI:IPI00554155 PRIDE:D4ACW1 Ensembl:ENSRNOT00000024938
UCSC:RGD:1304616 Uniprot:D4ACW1
Length = 772
Score = 140 (54.3 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S++ AL PQ+ ERILDMC APGGKT+ IA L+++ G ++A D +
Sbjct: 340 EYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANA 399
Query: 297 NKVMDI 302
++ +
Sbjct: 400 ERLKSV 405
Score = 100 (40.3 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 426 FDRVLLDAPCSALGL--RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLV----RPGGIIV 479
FDRVLLDAPCS G+ + + + ++ Q+ + A+ V + GG +V
Sbjct: 434 FDRVLLDAPCSGTGVISKDPAVKTNKDEKDIQRCAHLQKELLLSAIDSVNAASKTGGYLV 493
Query: 480 YSTCTINPGENE 491
Y TC+I ENE
Sbjct: 494 YCTCSITVEENE 505
Score = 44 (20.5 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 48 IRVNTLKTTTDDVIQKLL 65
+R NTLKT D+ Q L+
Sbjct: 292 LRTNTLKTRRRDLAQALI 309
>MGI|MGI:107891 [details] [associations]
symbol:Nop2 "NOP2 nucleolar protein" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 MGI:MGI:107891
GO:GO:0005730 GO:GO:0003723 GO:GO:0006364 GO:GO:0008757
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 HOVERGEN:HBG082043 ChiTaRS:NOP2
InterPro:IPR012586 Pfam:PF08062 TIGRFAMs:TIGR00446 EMBL:BC007151
EMBL:AK154006 IPI:IPI00311453 PIR:A48998 UniGene:Mm.29203
HSSP:Q96P11 ProteinModelPortal:Q922K7 SMR:Q922K7 STRING:Q922K7
PhosphoSite:Q922K7 PaxDb:Q922K7 PRIDE:Q922K7 UCSC:uc009dtn.2
InParanoid:Q922K7 OrthoDB:EOG4RJG1H Genevestigator:Q922K7
Uniprot:Q922K7
Length = 793
Score = 141 (54.7 bits), Expect = 9.6e-12, Sum P(3) = 9.6e-12
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S++ AL PQ+ ERILDMC APGGKT+ IA L+++ G ++A D +
Sbjct: 345 EYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANA 404
Query: 297 NKVMDI 302
+++ +
Sbjct: 405 DRLKSV 410
Score = 100 (40.3 bits), Expect = 9.6e-12, Sum P(3) = 9.6e-12
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 426 FDRVLLDAPCSALGL--RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLV----RPGGIIV 479
FDRVLLDAPCS G+ + + + ++ Q+ + A+ V + GG +V
Sbjct: 439 FDRVLLDAPCSGTGVISKDPAVKTNKDEKDIQRCAHLQKELLLSAIDSVNAASKTGGYLV 498
Query: 480 YSTCTINPGENE 491
Y TC+I ENE
Sbjct: 499 YCTCSITVEENE 510
Score = 43 (20.2 bits), Expect = 9.6e-12, Sum P(3) = 9.6e-12
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 48 IRVNTLKTTTDDVIQKLL 65
+R NTLKT D+ Q L+
Sbjct: 297 LRTNTLKTRRRDLAQLLI 314
>UNIPROTKB|F1SLR6 [details] [associations]
symbol:NOP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR011023
InterPro:IPR018314 InterPro:IPR023273 PRINTS:PR02012
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005730 GO:GO:0003723
GO:GO:0032259 GO:GO:0006364 GO:GO:0008757 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 CTD:4839 KO:K14835 OMA:DLQRVHK
TIGRFAMs:TIGR00446 GeneTree:ENSGT00660000095341 EMBL:CU914489
RefSeq:NP_001231175.1 UniGene:Ssc.5041 Ensembl:ENSSSCT00000000758
GeneID:100516080 KEGG:ssc:100516080 Uniprot:F1SLR6
Length = 821
Score = 140 (54.3 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S++ AL PQ+ ERILDMC APGGKT+ IA L+++ G ++A D +
Sbjct: 359 EYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANA 418
Query: 297 NKVMDI 302
++ +
Sbjct: 419 ERLKSV 424
Score = 99 (39.9 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 28/73 (38%), Positives = 38/73 (52%)
Query: 426 FDRVLLDAPCSALGL---RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLV----RPGGII 478
FDRVLLDAPCS G+ P + ++ LR Q+ + A+ V + GG +
Sbjct: 453 FDRVLLDAPCSGTGIISKDPAVKTNKDEKDILRC-AHLQKELLLSAIDSVSATSKTGGYL 511
Query: 479 VYSTCTINPGENE 491
VY TC+I ENE
Sbjct: 512 VYCTCSITVEENE 524
Score = 44 (20.5 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 48 IRVNTLKTTTDDVIQKLL 65
+R NTLKT D+ Q L+
Sbjct: 311 LRTNTLKTRRRDLAQALI 328
>FB|FBgn0033741 [details] [associations]
symbol:CG8545 species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
EMBL:AE013599 GO:GO:0003723 GO:GO:0032259 GO:GO:0006364
GO:GO:0008757 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 KO:K14835 TIGRFAMs:TIGR00446
GeneTree:ENSGT00660000095341 EMBL:BT088930 RefSeq:NP_610786.2
UniGene:Dm.2211 SMR:A1Z909 IntAct:A1Z909 STRING:A1Z909
EnsemblMetazoa:FBtr0087934 GeneID:36365 KEGG:dme:Dmel_CG8545
UCSC:CG8545-RA FlyBase:FBgn0033741 InParanoid:A1Z909 OMA:IMTGFDR
OrthoDB:EOG4GB5N7 GenomeRNAi:36365 NextBio:798159 Uniprot:A1Z909
Length = 891
Score = 137 (53.3 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G +Q S++ AL PQ+ ERILDMC+APGGK + IAS++++ G + A D +
Sbjct: 411 EYLAGHYMIQGASSLLPVMALAPQENERILDMCSAPGGKGSHIASIMKNTGVLFANDSNR 470
Query: 297 NKVMDI 302
+++ I
Sbjct: 471 DRIKAI 476
Score = 108 (43.1 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 426 FDRVLLDAPCSALGL---RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLV----RPGGII 478
FDRVLLDAPC+ G+ P + + + R + QR++ A+ GG I
Sbjct: 505 FDRVLLDAPCTGTGVVSKDPSVKTTKSEVDVQRCYN-LQRKLLLTAIDCTDAKSSTGGYI 563
Query: 479 VYSTCTINPGENE 491
VYSTC++ P ENE
Sbjct: 564 VYSTCSVLPEENE 576
Score = 39 (18.8 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 48 IRVNTLKTTTDDVIQKLL 65
IR NTLKT D+ L+
Sbjct: 363 IRTNTLKTRRRDLAGALI 380
>UNIPROTKB|F1N3G2 [details] [associations]
symbol:NOP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR011023
InterPro:IPR018314 InterPro:IPR023273 PRINTS:PR02012
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005730 GO:GO:0003723
GO:GO:0032259 GO:GO:0006364 GO:GO:0008757 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 OMA:DLQRVHK TIGRFAMs:TIGR00446
GeneTree:ENSGT00660000095341 EMBL:DAAA02014463 IPI:IPI00717832
UniGene:Bt.53770 Ensembl:ENSBTAT00000019607 Uniprot:F1N3G2
Length = 820
Score = 140 (54.3 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S++ AL PQ+ ERILDMC APGGKT+ IA L+++ G ++A D +
Sbjct: 361 EYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANA 420
Query: 297 NKVMDI 302
++ +
Sbjct: 421 ERLKSV 426
Score = 96 (38.9 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 28/73 (38%), Positives = 38/73 (52%)
Query: 426 FDRVLLDAPCSALGL---RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLV----RPGGII 478
FDRVLLDAPCS G+ P + ++ LR Q+ + A+ V + GG +
Sbjct: 455 FDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRC-AHLQKELLLSAIDSVNATSKTGGYL 513
Query: 479 VYSTCTINPGENE 491
VY TC+I ENE
Sbjct: 514 VYCTCSIMVEENE 526
Score = 44 (20.5 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 48 IRVNTLKTTTDDVIQKLL 65
+R NTLKT D+ Q L+
Sbjct: 313 LRTNTLKTRRRDLAQALI 330
>UNIPROTKB|P46087 [details] [associations]
symbol:NOP2 "Putative ribosomal RNA methyltransferase NOP2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008284 "positive regulation of cell proliferation"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
GO:GO:0005730 GO:GO:0008284 GO:GO:0003723 GO:GO:0032259
GO:GO:0006364 EMBL:AC006064 GO:GO:0008757 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 EMBL:M32110
EMBL:M33132 EMBL:X55504 EMBL:AK056208 EMBL:BC082985 EMBL:BC000656
EMBL:BC065257 EMBL:BC106072 EMBL:BC128183 EMBL:BC128184
IPI:IPI00294891 IPI:IPI00872909 PIR:A48168 RefSeq:NP_001028886.1
RefSeq:NP_001245237.1 RefSeq:NP_001245238.1 RefSeq:NP_001245239.1
RefSeq:NP_006161.2 UniGene:Hs.534334 ProteinModelPortal:P46087
SMR:P46087 IntAct:P46087 MINT:MINT-1137742 STRING:P46087
PhosphoSite:P46087 DMDM:146289861 SWISS-2DPAGE:P46087 PaxDb:P46087
PRIDE:P46087 Ensembl:ENST00000322166 Ensembl:ENST00000382421
Ensembl:ENST00000399466 Ensembl:ENST00000537442
Ensembl:ENST00000541778 Ensembl:ENST00000545200 GeneID:4839
KEGG:hsa:4839 UCSC:uc021qtw.1 CTD:4839 GeneCards:GC12M006666
HGNC:HGNC:7867 HPA:HPA040119 MIM:164031 neXtProt:NX_P46087
PharmGKB:PA164724026 HOGENOM:HOG000224258 HOVERGEN:HBG082043
KO:K14835 OMA:DLQRVHK ChiTaRS:NOP2 GenomeRNAi:4839 NextBio:18646
ArrayExpress:P46087 Bgee:P46087 CleanEx:HS_NOP2
Genevestigator:P46087 GermOnline:ENSG00000111641 InterPro:IPR012586
Pfam:PF08062 TIGRFAMs:TIGR00446 Uniprot:P46087
Length = 812
Score = 137 (53.3 bits), Expect = 3.7e-11, Sum P(3) = 3.7e-11
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S++ AL PQ+ ERILDMC APGGKT+ +A L+++ G ++A D +
Sbjct: 360 EYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANA 419
Query: 297 NKVMDI 302
++ +
Sbjct: 420 ERLKSV 425
Score = 98 (39.6 bits), Expect = 3.7e-11, Sum P(3) = 3.7e-11
Identities = 28/73 (38%), Positives = 38/73 (52%)
Query: 426 FDRVLLDAPCSALGL---RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLV----RPGGII 478
FDRVLLDAPCS G+ P + ++ LR Q+ + A+ V + GG +
Sbjct: 454 FDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRC-AHLQKELLLSAIDSVNATSKTGGYL 512
Query: 479 VYSTCTINPGENE 491
VY TC+I ENE
Sbjct: 513 VYCTCSITVEENE 525
Score = 44 (20.5 bits), Expect = 3.7e-11, Sum P(3) = 3.7e-11
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 48 IRVNTLKTTTDDVIQKLL 65
+R NTLKT D+ Q L+
Sbjct: 312 LRTNTLKTRRRDLAQALI 329
>UNIPROTKB|P36929 [details] [associations]
symbol:rsmB "16S rRNA m5C967 methyltransferase"
species:83333 "Escherichia coli K-12" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0070475 "rRNA base
methylation" evidence=IMP] [GO:0009383 "rRNA
(cytosine-C5-)-methyltransferase activity" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] HAMAP:MF_01856 InterPro:IPR004573 InterPro:IPR006027
InterPro:IPR018314 InterPro:IPR023541 Pfam:PF01029 PROSITE:PS01153
Pfam:PF01189 GO:GO:0005737 GO:GO:0006355 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U18997
GO:GO:0003723 EMBL:X77091 EMBL:Y10307 GO:GO:0070475 EMBL:X52114
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 GO:GO:0009383
HOGENOM:HOG000037300 KO:K03500 OMA:KPPMWLR ProtClustDB:PRK10901
TIGRFAMs:TIGR00563 PIR:D65121 RefSeq:NP_417747.1 RefSeq:YP_492144.1
PDB:1J4F PDB:1SQF PDB:1SQG PDBsum:1J4F PDBsum:1SQF PDBsum:1SQG
ProteinModelPortal:P36929 SMR:P36929 DIP:DIP-10946N IntAct:P36929
PRIDE:P36929 EnsemblBacteria:EBESCT00000000406
EnsemblBacteria:EBESCT00000016126 GeneID:12934442 GeneID:947789
KEGG:ecj:Y75_p3888 KEGG:eco:b3289 PATRIC:32122010 EchoBASE:EB2082
EcoGene:EG12163 BioCyc:EcoCyc:EG12163-MONOMER
BioCyc:ECOL316407:JW3250-MONOMER BioCyc:MetaCyc:EG12163-MONOMER
EvolutionaryTrace:P36929 Genevestigator:P36929 Uniprot:P36929
Length = 429
Score = 126 (49.4 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
+ LP F D G + +Q+ + L PQ GE ILD+CAAPGGKTT I + E +
Sbjct: 217 VHALPGFED---GWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQ 272
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLK 312
VVAVD ++ + +G+K
Sbjct: 273 VVAVDIDEQRLSRVYDNLKRLGMK 296
Score = 104 (41.7 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 426 FDRVLLDAPCSALGL---RPRL--FAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVY 480
FDR+LLDAPCSA G+ P + + I L + Q + D ++ GG +VY
Sbjct: 316 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPEL---AQLQSEILDAIWPHLKTGGTLVY 372
Query: 481 STCTINPGEN 490
+TC++ P EN
Sbjct: 373 ATCSVLPEEN 382
>ZFIN|ZDB-GENE-050706-95 [details] [associations]
symbol:nsun3 "NOP2/Sun domain family, member 3"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] Pfam:PF01189
ZFIN:ZDB-GENE-050706-95 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 GeneTree:ENSGT00660000095341 EMBL:CR762462
EMBL:CU915566 IPI:IPI01023612 Ensembl:ENSDART00000131664
ArrayExpress:F6NJM6 Bgee:F6NJM6 Uniprot:F6NJM6
Length = 375
Score = 126 (49.4 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 423 PNSFDRVLLDAPCS---ALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIV 479
P ++D+VL+DAPCS + P E ++ Q+ + A+ VRPGGI+V
Sbjct: 241 PGAYDKVLVDAPCSNDRSWLYTPDTHRGEMWLKERTQLPLLQKELLCSALAAVRPGGIVV 300
Query: 480 YSTCTINPGENEAL 493
YSTCT++ EN+++
Sbjct: 301 YSTCTMSRAENQSV 314
Score = 101 (40.6 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
+ +L N S++ AL+ Q+GE +LD+CAAPGGK+ AI
Sbjct: 151 QYYLLNAASLLPVLALNVQEGENVLDLCAAPGGKSLAI 188
>UNIPROTKB|E2RCH6 [details] [associations]
symbol:NOP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 GO:GO:0003723
GO:GO:0032259 GO:GO:0006364 GO:GO:0008757 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 OMA:DLQRVHK TIGRFAMs:TIGR00446
GeneTree:ENSGT00660000095341 EMBL:AAEX03015287
Ensembl:ENSCAFT00000023862 Uniprot:E2RCH6
Length = 826
Score = 138 (53.6 bits), Expect = 4.8e-11, Sum P(3) = 4.8e-11
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S++ AL PQ+ ERILDMC APGGKT+ IA L+++ G ++A D +
Sbjct: 372 EYLAGYYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANA 431
Query: 297 NKVMDI 302
++ +
Sbjct: 432 ERLKSV 437
Score = 96 (38.9 bits), Expect = 4.8e-11, Sum P(3) = 4.8e-11
Identities = 28/73 (38%), Positives = 38/73 (52%)
Query: 426 FDRVLLDAPCSALGL---RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLV----RPGGII 478
FDRVLLDAPCS G+ P + ++ LR Q+ + A+ V + GG +
Sbjct: 466 FDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRC-AHLQKELLLSAIDSVNATSKTGGYL 524
Query: 479 VYSTCTINPGENE 491
VY TC+I ENE
Sbjct: 525 VYCTCSIMVEENE 537
Score = 44 (20.5 bits), Expect = 4.8e-11, Sum P(3) = 4.8e-11
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 48 IRVNTLKTTTDDVIQKLL 65
+R NTLKT D+ Q L+
Sbjct: 324 LRTNTLKTRRRDLAQALI 341
>TIGR_CMR|SO_0030 [details] [associations]
symbol:SO_0030 "sun protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0001510 "RNA methylation" evidence=ISS]
[GO:0016434 "rRNA (cytosine) methyltransferase activity"
evidence=ISS] InterPro:IPR004573 InterPro:IPR006027
InterPro:IPR018314 Pfam:PF01029 PROSITE:PS01153 Pfam:PF01189
GO:GO:0005737 GO:GO:0006355 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0031167 GO:GO:0008649
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 HOGENOM:HOG000037300 KO:K03500
OMA:KPPMWLR ProtClustDB:PRK10901 TIGRFAMs:TIGR00563
RefSeq:NP_715672.1 ProteinModelPortal:Q8EKR0 SMR:Q8EKR0
GeneID:1167928 KEGG:son:SO_0030 PATRIC:23519751 Uniprot:Q8EKR0
Length = 428
Score = 130 (50.8 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 33/85 (38%), Positives = 47/85 (55%)
Query: 412 GGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLR-NH-----GKYQRRMF 465
G A + FDR+LLDAPCSA G+ R I+ LR NH + QR++
Sbjct: 296 GDAANIDSWWQGEQFDRILLDAPCSATGVIRR----HPDIKWLRKNHDIEELAELQRQIL 351
Query: 466 DQAVQLVRPGGIIVYSTCTINPGEN 490
D + ++PGG ++Y+TC+I P EN
Sbjct: 352 DHCWKWLKPGGTLLYATCSILPQEN 376
Score = 98 (39.6 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 212 AGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAA 271
AG+ + + I + + LP F LEG +Q+ + A L PQ E ILD CAA
Sbjct: 196 AGL--SDDAILLAAPKDVATLPLF---LEGAASVQDGAAQWAATLLAPQANELILDACAA 250
Query: 272 PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312
PGGK+ + L +++AVD ++ +Q+ + LK
Sbjct: 251 PGGKSCHLLEL-EPSIKLIAVDFDAKRLERVQQNLDRLSLK 290
>MGI|MGI:2146565 [details] [associations]
symbol:Nsun3 "NOL1/NOP2/Sun domain family member 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
PROSITE:PS01153 Pfam:PF01189 MGI:MGI:2146565 GO:GO:0008168
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
GeneTree:ENSGT00660000095341 CTD:63899 HOGENOM:HOG000017426
HOVERGEN:HBG106892 OMA:NRFNYPF OrthoDB:EOG4GMTX6 EMBL:AK032127
EMBL:AK153942 EMBL:AK169841 EMBL:BC125628 EMBL:BC125630
IPI:IPI00228678 IPI:IPI00848884 RefSeq:NP_849256.1 UniGene:Mm.26321
ProteinModelPortal:Q8CCT7 SMR:Q8CCT7 PhosphoSite:Q8CCT7
PRIDE:Q8CCT7 Ensembl:ENSMUST00000063089 GeneID:106338
KEGG:mmu:106338 UCSC:uc007zps.1 InParanoid:Q8CCT7 NextBio:358157
Bgee:Q8CCT7 CleanEx:MM_NSUN3 Genevestigator:Q8CCT7 Uniprot:Q8CCT7
Length = 348
Score = 132 (51.5 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 423 PNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGK-----YQRRMFDQAVQLVRPGGI 477
P +FD+VL+DAPCS R LF+++ + R H + Q + A++ +RPGG+
Sbjct: 202 PATFDKVLVDAPCS--NDRSWLFSSDSQKAAYRIHQRKNLPVLQVELVRSAIKALRPGGL 259
Query: 478 IVYSTCTINPGENE 491
+VYSTCT++ EN+
Sbjct: 260 LVYSTCTLSKAENQ 273
Score = 92 (37.4 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
+L N S++ AL+ + GE +LD+CAAPGGK+ A+
Sbjct: 114 YLLNAASLLPVLALELRDGEAVLDLCAAPGGKSVAL 149
>ZFIN|ZDB-GENE-040426-2476 [details] [associations]
symbol:nsun5 "NOP2/Sun domain family, member 5"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF01189 ZFIN:ZDB-GENE-040426-2476 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HOGENOM:HOG000203203
HOVERGEN:HBG062278 HSSP:O50082 EMBL:BC055530 IPI:IPI00837319
UniGene:Dr.78961 ProteinModelPortal:Q7SXM8 SMR:Q7SXM8 STRING:Q7SXM8
PRIDE:Q7SXM8 InParanoid:Q7SXM8 ArrayExpress:Q7SXM8 Bgee:Q7SXM8
Uniprot:Q7SXM8
Length = 483
Score = 136 (52.9 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G I LQ+ S + A L+P G ++D CAAPG KT+ +A++++++G++ A D ++
Sbjct: 204 GHIILQDKASCLPAFLLNPPVGSHVIDACAAPGNKTSHLAAIMKNKGKLFAFDLDAKRLS 263
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNE 330
+ L G+ C D LK + +E
Sbjct: 264 TMSTLLLRAGVTCHKLANQDFLKVDPQNSE 293
Score = 72 (30.4 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 429 VLLDAPCSALGLRPRLFAAEETIQS--LRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTIN 486
+LLD CS G+ L ET + L+ +Q + A+Q + I VYSTC+I+
Sbjct: 300 ILLDPSCSGSGMVCLLDELPETQEDGRLQALAAFQLHCLNHALQFPQLERI-VYSTCSIH 358
Query: 487 PGENE 491
ENE
Sbjct: 359 SQENE 363
Score = 55 (24.4 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 48 IRVNTLKTTTDDVIQKL 64
+RVNTLKT+ +DVI L
Sbjct: 136 VRVNTLKTSLEDVIDYL 152
>TIGR_CMR|CBU_1915 [details] [associations]
symbol:CBU_1915 "Sun protein" species:227377 "Coxiella
burnetii RSA 493" [GO:0000154 "rRNA modification" evidence=ISS]
[GO:0008649 "rRNA methyltransferase activity" evidence=ISS]
InterPro:IPR004573 InterPro:IPR006027 InterPro:IPR018314
Pfam:PF01029 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
GO:GO:0006355 GO:GO:0003723 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0031167 GO:GO:0008649 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 Gene3D:1.10.940.10
SUPFAM:SSF48013 EMBL:U10529 PIR:I40649 RefSeq:NP_820892.1
ProteinModelPortal:P45679 GeneID:1209828 KEGG:cbu:CBU_1915
PATRIC:17932565 HOGENOM:HOG000037300 KO:K03500 OMA:KPPMWLR
ProtClustDB:PRK10901 BioCyc:CBUR227377:GJ7S-1889-MONOMER
TIGRFAMs:TIGR00563 Uniprot:P45679
Length = 430
Score = 117 (46.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 409 QCLGGRAENSKGFSPNS-FDRVLLDAPCSALGLRPRLFAAEETIQSLRNHG---KYQRR- 463
QCL +S FDR+LLDAPCSA G+ R I+ LR G +Y ++
Sbjct: 294 QCLLADVSQIDQWSSGELFDRILLDAPCSATGVIRR----HPDIKLLRQPGDISQYHQKK 349
Query: 464 --MFDQAVQLVRPGGIIVYSTCTINPGENE 491
+ + +++ GG ++YSTC++ P ENE
Sbjct: 350 LQLLNALWTVLKAGGFLLYSTCSVLPDENE 379
Score = 106 (42.4 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 25/84 (29%), Positives = 44/84 (52%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
+ QLP F EG ++Q+ A+ L + + +LD CAAPG KT+ I +
Sbjct: 209 VHQLPGFN---EGYCYIQDAAGQFAAYLLKLENNQTVLDACAAPGSKTSHILEVNPHLKT 265
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLK 312
+VA+D + ++ I++ +GL+
Sbjct: 266 LVAIDNNKQRLNRIKENITRLGLR 289
>UNIPROTKB|F1S0R7 [details] [associations]
symbol:NSUN2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0016428 "tRNA
(cytosine-5-)-methyltransferase activity" evidence=IEA]
InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS51606 Pfam:PF01189
GO:GO:0005737 GO:GO:0005730 GeneTree:ENSGT00660000095589
GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
CTD:54888 KO:K15335 OMA:PIEKFYA EMBL:FP236478 EMBL:CU856020
RefSeq:XP_003359898.1 UniGene:Ssc.6680 Ensembl:ENSSSCT00000018622
GeneID:100518405 KEGG:ssc:100518405 Uniprot:F1S0R7
Length = 798
Score = 125 (49.1 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 32/73 (43%), Positives = 45/73 (61%)
Query: 426 FDRVLLDAPCSALG-LRPRLFAAEE--TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
+DR+L D PCS G +R + ++ T+ SL+ HG R A QLV GG +VYST
Sbjct: 265 YDRILCDVPCSGDGTMRKNIDVWKKWTTLNSLQLHGLQLRIATRGAEQLVE-GGRMVYST 323
Query: 483 CTINPGENEALCA 495
C++NP E+EA+ A
Sbjct: 324 CSLNPIEDEAVIA 336
Score = 102 (41.0 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 36/114 (31%), Positives = 50/114 (43%)
Query: 231 QLPSFYDVL-----EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR- 284
QL F+ L G I Q S++ L+ Q +ILDMCAAPG KTT + +L
Sbjct: 144 QLEKFHQFLVSETESGNISRQEAVSMIPPLLLNAQPHHKILDMCAAPGSKTTQLIEMLHA 203
Query: 285 D------EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332
D EG V+A D + + + A + CI DA R + + N
Sbjct: 204 DMTVPFPEGFVIANDVDNKRCYLLVHQAKRLSSPCIMVVNHDAACLPRLQMDVN 257
>MGI|MGI:2140844 [details] [associations]
symbol:Nsun5 "NOL1/NOP2/Sun domain family, member 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
Pfam:PF01189 MGI:MGI:2140844 GO:GO:0008168 KO:K15264 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 HSSP:Q96P11
CTD:55695 HOGENOM:HOG000203203 HOVERGEN:HBG062278 OMA:TLKTCSD
EMBL:AF412029 EMBL:AK079400 EMBL:AK149521 EMBL:AK156651
EMBL:BC051209 IPI:IPI00311260 RefSeq:NP_663389.2 UniGene:Mm.281189
ProteinModelPortal:Q8K4F6 SMR:Q8K4F6 STRING:Q8K4F6 PRIDE:Q8K4F6
DNASU:100609 Ensembl:ENSMUST00000000940 GeneID:100609
KEGG:mmu:100609 UCSC:uc008zyh.1 GeneTree:ENSGT00550000074709
InParanoid:Q8K4F6 OrthoDB:EOG48GW3D NextBio:354548 Bgee:Q8K4F6
CleanEx:MM_NSUN5 Genevestigator:Q8K4F6
GermOnline:ENSMUSG00000000916 Uniprot:Q8K4F6
Length = 465
Score = 151 (58.2 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLE------GEIFLQ 246
YF+R G Y G+ +++ + + + + + P+ D+ E G + LQ
Sbjct: 153 YFKRQGFSYQGRASSLEDLRAL-KGQHFLLDPLLPELLVFPAQTDLHEHPLYRAGHLILQ 211
Query: 247 NLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306
+ S + A L P G ++D CAAPG KT+ IA+LL+++G++ A D+ ++ + L
Sbjct: 212 DKASCLPAMLLSPPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLAAMATLV 271
Query: 307 AEMGLKCITTYKLDAL 322
A G+ C + D L
Sbjct: 272 ARAGVSCCELAEKDFL 287
Score = 58 (25.5 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 429 VLLDAPCSALGLRPRLFA-------AEETIQSLRNHGKYQRRMFDQAVQLVRPG-GIIVY 480
+LLD CS G+ R ++E +Q+L +Q+R A++ P +VY
Sbjct: 302 ILLDPSCSGSGMLSRQLEEHGEGTPSKERLQALAG---FQQRALCHALRF--PSLQRLVY 356
Query: 481 STCTINPGENE 491
STC++ ENE
Sbjct: 357 STCSLCQEENE 367
Score = 47 (21.6 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 48 IRVNTLKTTTDDVI 61
+RVNTLKT +D I
Sbjct: 138 VRVNTLKTRPEDAI 151
>UNIPROTKB|F1PRL0 [details] [associations]
symbol:NSUN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016428 "tRNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] InterPro:IPR023270 PRINTS:PR02011
PROSITE:PS51606 Pfam:PF01189 GeneTree:ENSGT00660000095589
GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
CTD:54888 KO:K15335 OMA:PIEKFYA EMBL:AAEX03017177
RefSeq:XP_535800.2 Ensembl:ENSCAFT00000016429 GeneID:478625
KEGG:cfa:478625 Uniprot:F1PRL0
Length = 780
Score = 125 (49.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 32/73 (43%), Positives = 45/73 (61%)
Query: 426 FDRVLLDAPCSALG-LRPRLFAAEE--TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
+DR+L D PCS G +R + ++ T+ SL+ HG R A QLV GG +VYST
Sbjct: 264 YDRILCDVPCSGDGTMRKNIDVWKKWTTLNSLQLHGLQLRIATRGAEQLVE-GGRMVYST 322
Query: 483 CTINPGENEALCA 495
C++NP E+EA+ A
Sbjct: 323 CSLNPIEDEAVIA 335
Score = 98 (39.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 35/114 (30%), Positives = 49/114 (42%)
Query: 231 QLPSFYDVL-----EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR- 284
QL F+ L G I Q S++ L+ +ILDMCAAPG KTT + +L
Sbjct: 143 QLEKFHQFLVSETESGNISRQEAVSMIPPLLLNAHPHHKILDMCAAPGSKTTQLIEMLHA 202
Query: 285 D------EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332
D EG V+A D + + + A + CI DA R + + N
Sbjct: 203 DMNVPFPEGFVIANDVDNKRCYLLVHQAKRLSSPCIMVVNHDASSIPRLQIDVN 256
>UNIPROTKB|Q96P11 [details] [associations]
symbol:NSUN5 "Putative methyltransferase NSUN5"
species:9606 "Homo sapiens" [GO:0008168 "methyltransferase
activity" evidence=IEA] PROSITE:PS01153 Pfam:PF01189 GO:GO:0008168
EMBL:CH471200 EMBL:AC073841 KO:K15264 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 EMBL:AF420249
EMBL:AF412028 EMBL:AK001129 EMBL:AK125667 EMBL:AK126375
EMBL:AK298221 EMBL:BC008084 IPI:IPI00101659 IPI:IPI00164154
IPI:IPI00807684 IPI:IPI00902543 IPI:IPI00910694
RefSeq:NP_001161819.1 RefSeq:NP_060514.1 RefSeq:NP_683759.1
UniGene:Hs.647060 PDB:2B9E PDBsum:2B9E ProteinModelPortal:Q96P11
SMR:Q96P11 STRING:Q96P11 DMDM:118573085 PaxDb:Q96P11 PRIDE:Q96P11
DNASU:55695 Ensembl:ENST00000252594 Ensembl:ENST00000310326
Ensembl:ENST00000428206 Ensembl:ENST00000438747
Ensembl:ENST00000570494 Ensembl:ENST00000573847
Ensembl:ENST00000577167 GeneID:55695 KEGG:hsa:55695 UCSC:uc003txv.3
UCSC:uc003txw.3 CTD:55695 GeneCards:GC07M072716 HGNC:HGNC:16385
HPA:HPA020536 neXtProt:NX_Q96P11 PharmGKB:PA134993779
HOGENOM:HOG000203203 HOVERGEN:HBG062278 OMA:TLKTCSD
EvolutionaryTrace:Q96P11 GenomeRNAi:55695 NextBio:60515
ArrayExpress:Q96P11 Bgee:Q96P11 CleanEx:HS_NSUN5
Genevestigator:Q96P11 GermOnline:ENSG00000130305 Uniprot:Q96P11
Length = 429
Score = 153 (58.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 44/138 (31%), Positives = 70/138 (50%)
Query: 194 YFERSGLYIGQGTAMMSRAGIFRASEG--IAVD-MHNRIFQLPSFYDVLE------GEIF 244
YF+R G + QG A S RA +G +D + + P+ D+ E G +
Sbjct: 153 YFKRQG-FSYQGRA--SSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLI 209
Query: 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
LQ+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 210 LQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMAT 269
Query: 305 LAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 270 LLARAGVSCCELAEEDFL 287
Score = 59 (25.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 23/68 (33%), Positives = 31/68 (45%)
Query: 429 VLLDAPCSALGLRPRLFA--AEETIQSLRNHGK--YQRRMFDQAVQLVRPG-GIIVYSTC 483
+LLD CS G+ R T +R H +Q+R A L P +VYSTC
Sbjct: 302 ILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHA--LTFPSLQRLVYSTC 359
Query: 484 TINPGENE 491
++ ENE
Sbjct: 360 SLCQEENE 367
>MGI|MGI:107252 [details] [associations]
symbol:Nsun2 "NOL1/NOP2/Sun domain family member 2"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0016428
"tRNA (cytosine-5-)-methyltransferase activity" evidence=ISO]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0030488 "tRNA
methylation" evidence=ISO] [GO:0032259 "methylation" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR023270
PRINTS:PR02011 PROSITE:PS01153 Pfam:PF01189 MGI:MGI:107252
GO:GO:0005737 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
GO:GO:0005819 GO:GO:0000049 eggNOG:COG0144
GeneTree:ENSGT00660000095589 HOGENOM:HOG000205147 GO:GO:0016428
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 CTD:54888
HOVERGEN:HBG106711 KO:K15335 OrthoDB:EOG4K9BBQ OMA:PIEKFYA
ChiTaRS:NSUN2 EMBL:DQ490066 EMBL:AK030124 EMBL:AK075999
EMBL:AK150631 EMBL:AK151917 EMBL:BC013625 EMBL:BC025549
IPI:IPI00850580 IPI:IPI00894870 RefSeq:NP_663329.3
UniGene:Mm.260009 ProteinModelPortal:Q1HFZ0 SMR:Q1HFZ0
STRING:Q1HFZ0 PhosphoSite:Q1HFZ0 PaxDb:Q1HFZ0 PRIDE:Q1HFZ0
Ensembl:ENSMUST00000022087 Ensembl:ENSMUST00000109699 GeneID:28114
KEGG:mmu:28114 UCSC:uc007rcm.2 UCSC:uc007rcn.2 InParanoid:Q1HFZ0
NextBio:306674 Bgee:Q1HFZ0 CleanEx:MM_NSUN2 Genevestigator:Q1HFZ0
Uniprot:Q1HFZ0
Length = 757
Score = 126 (49.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 426 FDRVLLDAPCSALG-LRPRLFAAEE--TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
+DR+L D PCS G +R + ++ T+ SL+ HG Q R+ + + + GG +VYST
Sbjct: 262 YDRILCDVPCSGDGTMRKNIDVWKKWTTLNSLQLHG-LQLRIATRGAEQLAEGGRMVYST 320
Query: 483 CTINPGENEALCA 495
C++NP E+EA+ A
Sbjct: 321 CSLNPVEDEAVIA 333
Score = 95 (38.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 29/88 (32%), Positives = 41/88 (46%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR-D------EGEVVAVD 293
G I Q S++ L+ + +ILDMCAAPG KTT + +L D EG V+A D
Sbjct: 156 GNISRQEAVSMIPPLLLNVEPHHKILDMCAAPGSKTTQLIEMLHADMSVPFPEGFVIAND 215
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ + + A + CI DA
Sbjct: 216 VDNKRCYLLVHQAKRLSSPCIMVVNHDA 243
>UNIPROTKB|D4A3S8 [details] [associations]
symbol:Nsun2 "NOL1/NOP2/Sun domain family, member 2
(Predicted)" species:10116 "Rattus norvegicus" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016428 "tRNA (cytosine-5-)-methyltransferase activity"
evidence=IEA] InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS51606
Pfam:PF01189 RGD:1311954 GO:GO:0005737 GO:GO:0005730 EMBL:CH474002
GeneTree:ENSGT00660000095589 GO:GO:0016428 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 CTD:54888 KO:K15335
OrthoDB:EOG4K9BBQ IPI:IPI00364693 RefSeq:NP_001101873.1
UniGene:Rn.27691 Ensembl:ENSRNOT00000023641 GeneID:361191
KEGG:rno:361191 NextBio:675488 Uniprot:D4A3S8
Length = 782
Score = 126 (49.4 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 426 FDRVLLDAPCSALG-LRPRLFAAEE--TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
+DR+L D PCS G +R + ++ T+ SL+ HG Q R+ + + + GG +VYST
Sbjct: 287 YDRILCDVPCSGDGTMRKNIDVWKKWTTLNSLQLHG-LQLRIATRGAEQLAEGGRMVYST 345
Query: 483 CTINPGENEALCA 495
C++NP E+EA+ A
Sbjct: 346 CSLNPVEDEAVIA 358
Score = 95 (38.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 29/88 (32%), Positives = 41/88 (46%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR-D------EGEVVAVD 293
G I Q S++ L+ + +ILDMCAAPG KTT + +L D EG V+A D
Sbjct: 181 GNISRQEAVSMIPPLLLNVEPHHKILDMCAAPGSKTTQLIEMLHADMSVPFPEGFVIAND 240
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ + + A + CI DA
Sbjct: 241 VDNKRCYLLVHQAKRLSSPCIMVVNHDA 268
>UNIPROTKB|F1MK61 [details] [associations]
symbol:NSUN2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0016428 "tRNA
(cytosine-5-)-methyltransferase activity" evidence=IEA]
InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS51606 Pfam:PF01189
GO:GO:0005737 GO:GO:0005730 GeneTree:ENSGT00660000095589
GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
CTD:54888 KO:K15335 OMA:PIEKFYA EMBL:DAAA02051302 IPI:IPI00694126
RefSeq:XP_002696495.1 UniGene:Bt.16304 Ensembl:ENSBTAT00000020559
GeneID:516044 KEGG:bta:516044 NextBio:20872109 Uniprot:F1MK61
Length = 777
Score = 119 (46.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 426 FDRVLLDAPCSALG-LRPRLFAAEE--TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
+DR+L D PCS G +R + ++ + SL+ HG R A QLV GG +VYST
Sbjct: 261 YDRILCDVPCSGDGTMRKNVDVWKKWSALNSLQLHGLQLRIATRGAEQLVE-GGRMVYST 319
Query: 483 CTINPGENEALCA 495
C++NP E+EA+ A
Sbjct: 320 CSLNPIEDEAVIA 332
Score = 102 (41.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 34/103 (33%), Positives = 46/103 (44%)
Query: 231 QLPSFYDVL-----EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR- 284
QL F+ L G I Q S++ L+ +ILDMCAAPG KTT + +L
Sbjct: 140 QLEKFHQFLVSETESGNISRQEAVSMIPPLLLNAHPHHKILDMCAAPGSKTTQLIEMLHA 199
Query: 285 D------EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
D EG V+A D + + + A +G CI DA
Sbjct: 200 DMNVPFPEGFVIANDVDNRRCYLLVHQAKRLGSPCIMVVNHDA 242
>UNIPROTKB|Q08J23 [details] [associations]
symbol:NSUN2 "tRNA (cytosine(34)-C(5))-methyltransferase"
species:9606 "Homo sapiens" [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0030488 "tRNA methylation" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016428 "tRNA (cytosine-5-)-methyltransferase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS01153 Pfam:PF01189
GO:GO:0005737 GO:GO:0005730 Pathway_Interaction_DB:aurora_b_pathway
GO:GO:0051301 GO:GO:0007067 GO:GO:0005819 GO:GO:0000049
EMBL:CH471102 Orphanet:88616 eggNOG:COG0144 HOGENOM:HOG000205147
GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
CTD:54888 HOVERGEN:HBG106711 KO:K15335 OrthoDB:EOG4K9BBQ
OMA:PIEKFYA EMBL:AB255451 EMBL:AK000310 EMBL:AK023994 EMBL:AK298980
EMBL:AC010366 EMBL:AC027334 EMBL:BC001041 EMBL:BC137083
IPI:IPI00306369 IPI:IPI00966877 RefSeq:NP_001180384.1
RefSeq:NP_060225.4 UniGene:Hs.481526 ProteinModelPortal:Q08J23
SMR:Q08J23 IntAct:Q08J23 STRING:Q08J23 PhosphoSite:Q08J23
DMDM:148887180 PaxDb:Q08J23 PeptideAtlas:Q08J23 PRIDE:Q08J23
Ensembl:ENST00000264670 Ensembl:ENST00000506139 GeneID:54888
KEGG:hsa:54888 UCSC:uc003jdt.3 GeneCards:GC05M006654
H-InvDB:HIX0004733 HGNC:HGNC:25994 HPA:HPA037896 MIM:610916
MIM:611091 neXtProt:NX_Q08J23 Orphanet:235 PharmGKB:PA134953940
InParanoid:Q08J23 PhylomeDB:Q08J23 BioCyc:MetaCyc:HS12087-MONOMER
ChiTaRS:NSUN2 GenomeRNAi:54888 NextBio:57879 ArrayExpress:Q08J23
Bgee:Q08J23 CleanEx:HS_NSUN2 Genevestigator:Q08J23 Uniprot:Q08J23
Length = 767
Score = 125 (49.1 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 426 FDRVLLDAPCSALG-LRPRLFAAEE--TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
+DR+L D PCS G +R + ++ T+ SL+ HG Q R+ + + + GG +VYST
Sbjct: 262 YDRILCDVPCSGDGTMRKNIDVWKKWTTLNSLQLHG-LQLRIATRGAEQLAEGGRMVYST 320
Query: 483 CTINPGENEALCA 495
C++NP E+EA+ A
Sbjct: 321 CSLNPIEDEAVIA 333
Score = 94 (38.1 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 29/88 (32%), Positives = 41/88 (46%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR-D------EGEVVAVD 293
G I Q S++ L+ + +ILDMCAAPG KTT + +L D EG V+A D
Sbjct: 156 GNISRQEAVSMIPPLLLNVRPHHKILDMCAAPGSKTTQLIEMLHADMNVPFPEGFVIAND 215
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ + + A + CI DA
Sbjct: 216 VDNKRCYLLVHQAKRLSSPCIMVVNHDA 243
>UNIPROTKB|P71675 [details] [associations]
symbol:MT1451 "Putative methyltransferase Rv1407/MT1451"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] InterPro:IPR006027 InterPro:IPR018314 Pfam:PF01029
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005618 GO:GO:0006355
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842576 GO:GO:0003723 GO:GO:0008168 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 KO:K03500 PIR:D70901
RefSeq:NP_215923.1 RefSeq:NP_335902.1 RefSeq:YP_006514787.1
ProteinModelPortal:P71675 SMR:P71675 PRIDE:P71675
EnsemblBacteria:EBMYCT00000002571 EnsemblBacteria:EBMYCT00000069025
GeneID:13319996 GeneID:886720 GeneID:924521 KEGG:mtc:MT1451
KEGG:mtu:Rv1407 KEGG:mtv:RVBD_1407 PATRIC:18124960
TubercuList:Rv1407 HOGENOM:HOG000037302 OMA:TSHPEWL
ProtClustDB:CLSK871930 Uniprot:P71675
Length = 457
Score = 123 (48.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 426 FDRVLLDAPCSALG-LRPRLFAA-EETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTC 483
FDRVL+DAPC+ LG LR R A + K QR + A+ L RPGG+++Y+TC
Sbjct: 335 FDRVLVDAPCTGLGALRRRPEARWRRQPADVAALAKLQRELLSAAIALTRPGGVVLYATC 394
Query: 484 T 484
+
Sbjct: 395 S 395
Score = 90 (36.7 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 238 VLEGEIFLQNLPSIVTAHALD--PQKGE--RILDMCAAPGGKTTAIASL-LRDEGEVVAV 292
V +G+ +Q+ S + A AL P G+ R LD+CA PGGKT +A L L+ V AV
Sbjct: 241 VRDGQALVQDEGSQLVARALTLAPVDGDTGRWLDLCAGPGGKTALLAGLGLQCAARVTAV 300
Query: 293 DRSHNK 298
+ S ++
Sbjct: 301 EPSPHR 306
>TIGR_CMR|CPS_0018 [details] [associations]
symbol:CPS_0018 "sun protein" species:167879 "Colwellia
psychrerythraea 34H" [GO:0000154 "rRNA modification" evidence=ISS]
[GO:0008649 "rRNA methyltransferase activity" evidence=ISS]
InterPro:IPR004573 InterPro:IPR006027 InterPro:IPR018314
Pfam:PF01029 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
GO:GO:0006355 GO:GO:0003723 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0031167 GO:GO:0008649 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 Gene3D:1.10.940.10
SUPFAM:SSF48013 HOGENOM:HOG000037300 KO:K03500 OMA:KPPMWLR
TIGRFAMs:TIGR00563 RefSeq:YP_266800.1 ProteinModelPortal:Q48AT0
STRING:Q48AT0 GeneID:3518998 KEGG:cps:CPS_0018 PATRIC:21463471
BioCyc:CPSY167879:GI48-135-MONOMER Uniprot:Q48AT0
Length = 440
Score = 116 (45.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 415 AENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKY---QRRMFDQAVQL 471
A +S FDR+LLDAPCS G+ R + ++ + K Q+++ D L
Sbjct: 309 AATQNWWSGEQFDRILLDAPCSGTGVIRR-HPDIKWLRKADDIDKLVVLQQQILDNIWSL 367
Query: 472 VRPGGIIVYSTCTINPGEN 490
++PGG ++Y+TC++ P EN
Sbjct: 368 LKPGGTLLYATCSVLPEEN 386
Score = 96 (38.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
+ +LP F D G + +Q+ + A LD Q + +LD CAAPGGKT I D
Sbjct: 221 VAKLPGFDD---GWVSIQDGAAQQAARLLDCQPNDIVLDCCAAPGGKTCHIIEQTPDIAS 277
Query: 289 VVAVDRSHNKVMDIQK 304
+ A+D ++ + +
Sbjct: 278 MTAIDIEEGRLTRVHE 293
>DICTYBASE|DDB_G0295715 [details] [associations]
symbol:DDB_G0295715 "NOL1/NOP2/Sun family protein"
species:44689 "Dictyostelium discoideum" [GO:0016428 "tRNA
(cytosine-5-)-methyltransferase activity" evidence=IEA]
InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS51606
dictyBase:DDB_G0295715 Pfam:PF01189 EMBL:AAFI02000044 GO:GO:0016428
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 KO:K15335
RefSeq:XP_002649150.1 EnsemblProtists:DDB0252886 GeneID:8623378
KEGG:ddi:DDB_G0295715 OMA:YRVFGIE ProtClustDB:CLSZ2736084
Uniprot:C7G023
Length = 789
Score = 128 (50.1 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 415 AENSKGF-SPNSFDRVLLDAPCSALGL---RPRLFAAEETIQSLRNHGKYQRRMFDQAVQ 470
++NS G SP DR+L D PCS G P ++ S+ H + Q ++ + Q
Sbjct: 312 SKNSDGSESPIYMDRILCDVPCSGDGTTRKNPEVWKKWTHAGSIGLH-QLQIKIATRGCQ 370
Query: 471 LVRPGGIIVYSTCTINPGENEALCA 495
L++ GG +VYSTC++NP ENEA+ A
Sbjct: 371 LLKVGGRMVYSTCSMNPVENEAVIA 395
Score = 87 (35.7 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 20/40 (50%), Positives = 23/40 (57%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
+G I Q S++ LD Q ILDMCAAPG KTT I
Sbjct: 190 QGNITRQEAVSMIPPLFLDVQSHYNILDMCAAPGSKTTQI 229
>FB|FBgn0026079 [details] [associations]
symbol:Nsun2 "NOP2-Sun domain family, member 2 ortholog"
species:7227 "Drosophila melanogaster" [GO:0005575
"cellular_component" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0016428 "tRNA (cytosine-5-)-methyltransferase
activity" evidence=ISS] [GO:0001510 "RNA methylation" evidence=ISS]
[GO:0007614 "short-term memory" evidence=IMP] InterPro:IPR018314
InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS01153 Pfam:PF01189
GO:GO:0005737 GO:GO:0005730 EMBL:AE014298 GO:GO:0007614
GO:GO:0000049 EMBL:AL033125 eggNOG:COG0144
GeneTree:ENSGT00660000095589 GO:GO:0016428 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HSSP:Q96P11 KO:K15335
EMBL:AY061496 RefSeq:NP_652007.1 UniGene:Dm.3580
ProteinModelPortal:Q9W4M9 SMR:Q9W4M9 MINT:MINT-1331472
STRING:Q9W4M9 PaxDb:Q9W4M9 PRIDE:Q9W4M9 EnsemblMetazoa:FBtr0070669
GeneID:45064 KEGG:dme:Dmel_CG6133 UCSC:CG6133-RA
FlyBase:FBgn0026079 InParanoid:Q9W4M9 OMA:PIEKFYA OrthoDB:EOG44TMPV
PhylomeDB:Q9W4M9 GenomeRNAi:45064 NextBio:837913 Bgee:Q9W4M9
Uniprot:Q9W4M9
Length = 746
Score = 127 (49.8 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 426 FDRVLLDAPCSALG-LR--PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
FD++L D PCS G LR P ++ Q+ HG Q R+ + +++ GG +VYST
Sbjct: 264 FDKILCDVPCSGDGTLRKNPDIWLKWNLAQAYNLHG-IQYRIVRRGAEMLEVGGRLVYST 322
Query: 483 CTINPGENEAL 493
C++NP ENEA+
Sbjct: 323 CSLNPIENEAV 333
Score = 87 (35.7 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 28/103 (27%), Positives = 48/103 (46%)
Query: 229 IFQLPSFY--DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR-- 284
+++L +F + G I Q S++ LD + +++LDMCAAPG KT + L
Sbjct: 142 LYRLHNFLIVETTAGGISRQEAVSMIPPIVLDVRPTDKVLDMCAAPGSKTAQLIEALHAA 201
Query: 285 -DE-----GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+E G V+A D +N+ + A + C+ D+
Sbjct: 202 PEEHKIPPGFVLANDVDNNRCYMLVHQAKRLNSPCLLVTNHDS 244
Score = 44 (20.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/60 (21%), Positives = 26/60 (43%)
Query: 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297
++E ++F + + ++ H P+ ER L + P G + +D + R HN
Sbjct: 88 IIETQLFTEYVRAVAELHQKAPEDVERPLCLPWYPNGLAYQLHLTRKDIRRSEPLYRLHN 147
>UNIPROTKB|F1NJM1 [details] [associations]
symbol:NSUN2 "tRNA (cytosine(34)-C(5))-methyltransferase"
species:9031 "Gallus gallus" [GO:0016428 "tRNA
(cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
EMBL:AADN02008005 EMBL:AADN02008006 IPI:IPI00594887
Ensembl:ENSGALT00000021325 GeneTree:ENSGT00660000095589 OMA:PIEKFYA
GO:GO:0005737 GO:GO:0005730 GO:GO:0016428 InterPro:IPR001678
InterPro:IPR023267 InterPro:IPR023270 Pfam:PF01189 PRINTS:PR02008
PRINTS:PR02011 PROSITE:PS51606 Uniprot:F1NJM1
Length = 793
Score = 129 (50.5 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 426 FDRVLLDAPCSALG-LRPRLFAAEE--TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
+DR+L D PCS G +R + ++ T SL+ HG Q R+ + V+ + GG +VYST
Sbjct: 261 YDRILCDVPCSGDGTMRKNIDVWKKWTTQNSLQLHG-LQLRIATRGVEQLAEGGRMVYST 319
Query: 483 CTINPGENEALCA 495
C++NP ENEA+ A
Sbjct: 320 CSLNPIENEAVIA 332
Score = 85 (35.0 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 26/88 (29%), Positives = 38/88 (43%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE-------GEVVAVD 293
G I Q S++ L+ +ILDMCAAPG KT + +L + G V+A D
Sbjct: 155 GNISRQEAVSMIPPLLLNVNPDHKILDMCAAPGSKTAQLIEMLHADMNVPFPKGFVIAND 214
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ + + A + CI DA
Sbjct: 215 VDNKRCYLLVHQAKRLNSPCIMVVNHDA 242
>UNIPROTKB|Q5ZLV4 [details] [associations]
symbol:NSUN2 "tRNA (cytosine(34)-C(5))-methyltransferase"
species:9031 "Gallus gallus" [GO:0016428 "tRNA
(cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR023270
PRINTS:PR02011 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
GO:GO:0005730 GO:GO:0000049 eggNOG:COG0144 HOGENOM:HOG000205147
GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HSSP:Q96P11 EMBL:AJ719630 IPI:IPI00594887 RefSeq:NP_001026175.1
UniGene:Gga.20332 ProteinModelPortal:Q5ZLV4 STRING:Q5ZLV4
GeneID:420938 KEGG:gga:420938 CTD:54888 HOVERGEN:HBG106711
InParanoid:Q5ZLV4 KO:K15335 OrthoDB:EOG4K9BBQ NextBio:20823781
Uniprot:Q5ZLV4
Length = 796
Score = 129 (50.5 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 426 FDRVLLDAPCSALG-LRPRLFAAEE--TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
+DR+L D PCS G +R + ++ T SL+ HG Q R+ + V+ + GG +VYST
Sbjct: 262 YDRILCDVPCSGDGTMRKNIDVWKKWTTQNSLQLHG-LQLRIATRGVEQLAEGGRMVYST 320
Query: 483 CTINPGENEALCA 495
C++NP ENEA+ A
Sbjct: 321 CSLNPIENEAVIA 333
Score = 85 (35.0 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 26/88 (29%), Positives = 38/88 (43%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE-------GEVVAVD 293
G I Q S++ L+ +ILDMCAAPG KT + +L + G V+A D
Sbjct: 156 GNISRQEAVSMIPPLLLNVNPDHKILDMCAAPGSKTAQLIEMLHADMNVPFPKGFVIAND 215
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ + + A + CI DA
Sbjct: 216 VDNKRCYLLVHQAKRLNSPCIMVVNHDA 243
>ZFIN|ZDB-GENE-030131-4017 [details] [associations]
symbol:nsun2 "NOL1/NOP2/Sun domain family, member
2" species:7955 "Danio rerio" [GO:0016428 "tRNA
(cytosine-5-)-methyltransferase activity" evidence=IEA]
InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS51606 Pfam:PF01189
ZFIN:ZDB-GENE-030131-4017 eggNOG:COG0144
GeneTree:ENSGT00660000095589 HOGENOM:HOG000205147 GO:GO:0016428
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOVERGEN:HBG106711 OrthoDB:EOG4K9BBQ EMBL:BX511155 IPI:IPI00933090
UniGene:Dr.119317 Ensembl:ENSDART00000140336 Uniprot:A5PMI3
Length = 766
Score = 121 (47.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 426 FDRVLLDAPCSALG-LRPRLFAAEE--TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
+DR+L D PCS G +R + ++ T SL HG Q R+ + V+ + GG +VYST
Sbjct: 256 YDRILCDVPCSGDGTMRKNIDVWKKWTTSNSLHLHG-LQLRIAVRGVEQLAVGGRMVYST 314
Query: 483 CTINPGENEALCA 495
C++NP E+EA+ A
Sbjct: 315 CSLNPIEDEAVIA 327
Score = 92 (37.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 29/104 (27%), Positives = 45/104 (43%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD-------EGEVVAVD 293
G I Q S++ L + +ILDMCAAPG KT + +L EG V+A D
Sbjct: 150 GNISRQEAVSMIPPLLLKIEPQHKILDMCAAPGSKTAQLIEMLHSDMDVPFPEGFVIAND 209
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNM 337
+ + + A + CI DA R ++N + ++
Sbjct: 210 VDNKRCYLLVHQAKRLNSPCIMVVNHDASSIPRLHFDNNGKKDI 253
>ZFIN|ZDB-GENE-041212-77 [details] [associations]
symbol:nsun4 "NOL1/NOP2/Sun domain family, member 4"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF01189
ZFIN:ZDB-GENE-041212-77 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 HOVERGEN:HBG106892 CTD:387338 EMBL:BC086725
IPI:IPI00495141 RefSeq:NP_001008649.1 UniGene:Dr.5991
ProteinModelPortal:Q5PRB6 GeneID:494106 KEGG:dre:494106
InParanoid:Q5PRB6 NextBio:20865614 ArrayExpress:Q5PRB6
Uniprot:Q5PRB6
Length = 327
Score = 108 (43.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 410 CLGGRAENSKGFSPNSFDRVLLDAPC-----SALGLRPRLFAAEETIQSLRNHGKYQRRM 464
C+ GR + SFDRVL+D PC SA+ +F T + + Q ++
Sbjct: 178 CIDGRELGMR--EEKSFDRVLVDVPCTTDRHSAVVEENNIFKRSRT-KERQKLPLLQIQL 234
Query: 465 FDQAVQLVRPGGIIVYSTCTINPGENEAL 493
+Q R GG+IVYSTC+++ +NE +
Sbjct: 235 LVAGIQAARQGGLIVYSTCSLSQLQNECV 263
Score = 93 (37.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
+L + S++ ALD + G+ +LD+CAAPGGKT A+
Sbjct: 99 YLLDAASVLPVLALDVRPGQTVLDLCAAPGGKTLAL 134
>POMBASE|SPAC23C4.17 [details] [associations]
symbol:trm402 "tRNA (cytosine-5-)-methyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000049
"tRNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0016428 "tRNA (cytosine-5-)-methyltransferase
activity" evidence=ISO] [GO:0030488 "tRNA methylation"
evidence=ISO] InterPro:IPR018314 InterPro:IPR023270 PRINTS:PR02011
PROSITE:PS01153 PomBase:SPAC23C4.17 Pfam:PF01189 GO:GO:0005634
EMBL:CU329670 GO:GO:0000049 eggNOG:COG0144 HOGENOM:HOG000205147
OrthoDB:EOG4RFQ1S GO:GO:0016428 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HSSP:Q96P11 PIR:T38272
RefSeq:NP_593189.2 STRING:O13935 EnsemblFungi:SPAC23C4.17.1
GeneID:2541917 NextBio:20803004 Uniprot:O13935
Length = 685
Score = 129 (50.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 426 FDRVLLDAPCSALG-LRPRLFAAEE-TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTC 483
FDR+L D PCS G R L E + S + Q R+ + +QL++ GG +VYSTC
Sbjct: 264 FDRILADVPCSGDGTFRKNLSLWREWSANSAFSLHPLQLRILIRGLQLLKVGGCLVYSTC 323
Query: 484 TINPGENEAL 493
+INP ENEA+
Sbjct: 324 SINPIENEAV 333
Score = 79 (32.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 36/143 (25%), Positives = 61/143 (42%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G I Q S++ LD + ILDMCAAPG KT + + + + D +H
Sbjct: 139 GNINRQEAVSMLPPLFLDVEPHHVILDMCAAPGSKTAQLIEAVYKKANIK--DAAH---- 192
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESN--DEPNM------CNSKDNNYIT-SQTS 351
D + L + GL + D +A ++ N + PN+ ++ N Y+ S S
Sbjct: 193 DSKNLKSVEGL--VIANDADPKRAQMLVHQINRLNSPNILVVNHDASTMPNIYVKGSSPS 250
Query: 352 DSMKLHKEVPSIAAEGLNGDKSC 374
D + + +E + + + D C
Sbjct: 251 DGLNVIEEKKILKFDRILADVPC 273
>CGD|CAL0000089 [details] [associations]
symbol:orf19.518 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0016428 "tRNA
(cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0030488
"tRNA methylation" evidence=IEA] InterPro:IPR018314
InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS01153 PROSITE:PS51606
CGD:CAL0000089 Pfam:PF01189 GO:GO:0003723 GO:GO:0032259
EMBL:AACQ01000055 eggNOG:COG0144 HOGENOM:HOG000205147 KO:K15334
GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
RefSeq:XP_717381.1 ProteinModelPortal:Q5A6N6 STRING:Q5A6N6
GeneID:3640995 KEGG:cal:CaO19.518 Uniprot:Q5A6N6
Length = 713
Score = 117 (46.2 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 426 FDRVLLDAPCSA-LGLRPRLFAAEE--TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
FDR+L D PCS +R L ++ +L H Q + ++ +QL++ GG +VYST
Sbjct: 257 FDRILCDVPCSGDATMRKNLNVWKDFRVGNALGLHN-VQELILNRGLQLLKKGGRLVYST 315
Query: 483 CTINPGENEALCA 495
C+++P ENEA+ A
Sbjct: 316 CSLSPIENEAIVA 328
Score = 90 (36.7 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 32/104 (30%), Positives = 45/104 (43%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE-------VVAVD 293
G I Q S++ LD + +LDMCAAPG KT + L E E V+A D
Sbjct: 153 GNISRQEAVSMIPPLLLDVKPHHYVLDMCAAPGSKTAQLIEALHAEDEKKLPTGFVLAND 212
Query: 294 ----RSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
RSH V +++L + L + + +R N S D
Sbjct: 213 SDYKRSHMLVHQVKRLNSPNFL--VVNHDATLFPRIRLNNSSQD 254
>ASPGD|ASPL0000055599 [details] [associations]
symbol:AN0757 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0016428 "tRNA
(cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0030488
"tRNA methylation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR018314 InterPro:IPR023270 PRINTS:PR02011
PROSITE:PS01153 PROSITE:PS51606 Pfam:PF01189 EMBL:BN001308
GO:GO:0003723 OMA:HYIPEIT GO:GO:0016428 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 EnsemblFungi:CADANIAT00001908
Uniprot:C8VQX6
Length = 990
Score = 128 (50.1 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 31/86 (36%), Positives = 50/86 (58%)
Query: 415 AENSKGFSPN---SFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKY--QRRMFDQAV 469
+E+ K +PN FDR+L D PC+ G + + +G + Q R+ +A+
Sbjct: 297 SEDGKP-TPNRYLKFDRILADVPCTGDGTARKNYGVWRDWTPQNGNGLHMTQVRILVRAL 355
Query: 470 QLVRPGGIIVYSTCTINPGENEALCA 495
Q+++ GG +VYSTC++NP ENEA+ A
Sbjct: 356 QMLKVGGRVVYSTCSMNPIENEAVVA 381
Score = 80 (33.2 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAV 292
G I Q + S++ +D + G +LDMCAAPG K+ + ++ GE A+
Sbjct: 170 GNISRQEVVSMIPPLLMDLRPGMTVLDMCAAPGSKSAQLMEMIH-AGEEEAM 220
>TIGR_CMR|SO_1575 [details] [associations]
symbol:SO_1575 "NOL1/NOP2/sun family putative RNA
methylase" species:211586 "Shewanella oneidensis MR-1" [GO:0001510
"RNA methylation" evidence=ISS] [GO:0008173 "RNA methyltransferase
activity" evidence=ISS] Pfam:PF01189 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008168 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 KO:K03500 HSSP:O50082
RefSeq:NP_717188.2 ProteinModelPortal:Q8EGM5 GeneID:1169378
KEGG:son:SO_1575 PATRIC:23522792 HOGENOM:HOG000294607 OMA:DAPCSCT
ProtClustDB:CLSK906327 Uniprot:Q8EGM5
Length = 458
Score = 117 (46.2 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 424 NSFDRVLLDAPCSALGLRPRLFAAE--ETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYS 481
N FD VL+DAPCS G R +T+ ++ + Q + ++ Q V+ GG ++Y+
Sbjct: 338 NYFDGVLVDAPCSCTGTWRRNPDMRWLDTLDAVMDKATLQLDILSRSSQAVKAGGTLIYA 397
Query: 482 TCTINPGENE 491
TC+++P ENE
Sbjct: 398 TCSLSPVENE 407
Score = 82 (33.9 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 222 AVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAS 281
A+++ ++ L EG I +Q+L S V P+ + D C+ GGKT + S
Sbjct: 222 AINLGSKSMNLNEITLYKEGNIEIQDLASQVIGQICAPEPWQHWWDACSGAGGKTLQLRS 281
Query: 282 LLRD---------EGEVVAVDRSHNKVMDIQKLA--AEMGLKCITTYKLDAL 322
L++ +G +V+ D N + ++ K A A+ I ++ DAL
Sbjct: 282 LMQTAATKQHTPLQGSIVSSDIRANALEELSKRAQRAQFDGISIARWRSDAL 333
>TAIR|locus:2179749 [details] [associations]
symbol:AT5G26180 "AT5G26180" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF01189 EMBL:CP002688 GenomeReviews:BA000015_GR
KO:K15264 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 HOGENOM:HOG000203203 OMA:TLKTCSD EMBL:BT008590
EMBL:AK117681 IPI:IPI00521639 RefSeq:NP_197990.2 RefSeq:NP_851079.1
UniGene:At.30863 ProteinModelPortal:Q8GYE8 SMR:Q8GYE8 PaxDb:Q8GYE8
PRIDE:Q8GYE8 EnsemblPlants:AT5G26180.1 EnsemblPlants:AT5G26180.2
GeneID:832687 KEGG:ath:AT5G26180 TAIR:At5g26180 InParanoid:Q8GYE8
PhylomeDB:Q8GYE8 ProtClustDB:CLSN2680267 ArrayExpress:Q8GYE8
Genevestigator:Q8GYE8 Uniprot:Q8GYE8
Length = 567
Score = 136 (52.9 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297
V G IFLQ S + A AL PQ G +LD C+APG KT +A+L+ +G+++A + +
Sbjct: 281 VANGRIFLQGKASSMVAAALQPQAGWEVLDACSAPGNKTIHLAALMEGQGKIIACELNEE 340
Query: 298 KVMDIQ 303
+V ++
Sbjct: 341 RVKRLE 346
Score = 53 (23.7 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 429 VLLDAPCSALG-LRPRL-----FAAEET---IQSLRNH--GKYQRRMFDQAVQLVRPGGI 477
+LLD CS G + RL +E+ S+R H +Q++ A+ + +
Sbjct: 380 ILLDPSCSGSGTITDRLDHLLPSHSEDNNMNYDSMRLHKLAVFQKKALAHALSFPKVERV 439
Query: 478 IVYSTCTINPGENE 491
VYSTC+I ENE
Sbjct: 440 -VYSTCSIYQIENE 452
Score = 49 (22.3 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 48 IRVNTLKTTTDDVIQKL 64
+RVNTLK D +Q+L
Sbjct: 235 VRVNTLKMDVDSAVQEL 251
Score = 41 (19.5 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 339 NSKDNNYITSQTSDSMKLHK 358
+S+DNN DSM+LHK
Sbjct: 403 HSEDNN----MNYDSMRLHK 418
>SGD|S000000120 [details] [associations]
symbol:NCL1 "S-adenosyl-L-methionine-dependent tRNA:
m5C-methyltransferase, methyl" species:4932 "Saccharomyces
cerevisiae" [GO:0016428 "tRNA (cytosine-5-)-methyltransferase
activity" evidence=IEA;IDA] [GO:0030488 "tRNA methylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0000049 "tRNA
binding" evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR018314
InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS01153 SGD:S000000120
Pfam:PF01189 GO:GO:0005634 GO:GO:0005730 EMBL:BK006936 EMBL:X77291
GO:GO:0000049 EMBL:Z35785 PIR:S45758 RefSeq:NP_009529.1
ProteinModelPortal:P38205 SMR:P38205 DIP:DIP-3932N IntAct:P38205
MINT:MINT-503175 STRING:P38205 PaxDb:P38205 PeptideAtlas:P38205
EnsemblFungi:YBL024W GeneID:852257 KEGG:sce:YBL024W CYGD:YBL024w
eggNOG:COG0144 GeneTree:ENSGT00660000095589 HOGENOM:HOG000205147
KO:K15334 OMA:HYIPEIT OrthoDB:EOG4RFQ1S
BioCyc:MetaCyc:MONOMER-16016 NextBio:970841 Genevestigator:P38205
GermOnline:YBL024W GO:GO:0016428 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 Uniprot:P38205
Length = 684
Score = 115 (45.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 426 FDRVLLDAPCSALG-LRPRLFAAEE--TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
FDR+L D PCS G +R + ++ T L H Q + ++ + L++ G +VYST
Sbjct: 251 FDRILCDVPCSGDGTMRKNVNVWKDWNTQAGLGLHA-VQLNILNRGLHLLKNNGRLVYST 309
Query: 483 CTINPGENEALCA 495
C++NP ENEA+ A
Sbjct: 310 CSLNPIENEAVVA 322
Score = 87 (35.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 28/74 (37%), Positives = 37/74 (50%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR---DE--GEVVAVD-- 293
G I Q S++ L+ + +LDMCAAPG KT + L DE G VVA D
Sbjct: 145 GNISRQEAVSMIPPIVLEVKPHHTVLDMCAAPGSKTAQLIEALHKDTDEPSGFVVANDAD 204
Query: 294 --RSHNKVMDIQKL 305
RSH V +++L
Sbjct: 205 ARRSHMLVHQLKRL 218
>TIGR_CMR|SPO_2037 [details] [associations]
symbol:SPO_2037 "NOL1/NOP2/sun family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF01189 EMBL:CP000031 GenomeReviews:CP000031_GR
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000037301 RefSeq:YP_167268.1 ProteinModelPortal:Q5LRT7
GeneID:3193597 KEGG:sil:SPO2037 PATRIC:23377411 OMA:GTRNVQV
ProtClustDB:CLSK933726 Uniprot:Q5LRT7
Length = 391
Score = 99 (39.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHN 297
L+G + LQ+ S AL G R+LD CA GGKT A+A++ G EV A D +
Sbjct: 197 LDGLVELQDAASQAIVAALPLAPGMRVLDYCAGGGGKTLALAAV---PGIEVFAHDAAPQ 253
Query: 298 KVMDIQKLAAEMGLKCITTYKLDALKAVR 326
++ D+ AA G + LD +A R
Sbjct: 254 RMRDLPARAARAGAQ---VRLLDTAEAAR 279
Score = 96 (38.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 426 FDRVLLDAPCSALGLRPRLFAAEETIQSLRNHG--KYQRRMFDQAVQLVRPGGIIVYSTC 483
FD VL DAPCS G R A + + + QR + A L PGG++ Y+TC
Sbjct: 283 FDLVLADAPCSGSGSWRRAPAGKWELSEEKFAALLAVQREILHCAAALTAPGGVLAYATC 342
Query: 484 TINPGENE 491
++ EN+
Sbjct: 343 SMLSEEND 350
>POMBASE|SPAC17D4.04 [details] [associations]
symbol:trm401 "tRNA (cytosine-5-)-methyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000049
"tRNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0016428
"tRNA (cytosine-5-)-methyltransferase activity" evidence=ISO]
[GO:0030488 "tRNA methylation" evidence=ISO] InterPro:IPR018314
InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS01153 Pfam:PF01189
PomBase:SPAC17D4.04 GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0000049 eggNOG:COG0144
HOGENOM:HOG000205147 GO:GO:0016428 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 RefSeq:NP_594695.3 STRING:Q9HGQ2
EnsemblFungi:SPAC17D4.04.1 GeneID:2542264 OrthoDB:EOG4MPMZP
NextBio:20803328 Uniprot:Q9HGQ2
Length = 688
Score = 118 (46.6 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 426 FDRVLLDAPCSALGLRPRLFAA--EETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTC 483
FDR+L D PCS G + A E ++++ Q ++ + +QL+ GG +VYSTC
Sbjct: 250 FDRILADVPCSGDGTFRKNIALWNEWSLKTALGLHATQIKILMRGLQLLEKGGRLVYSTC 309
Query: 484 TINPGENEAL 493
++NP ENEA+
Sbjct: 310 SLNPIENEAV 319
Score = 77 (32.2 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLL 283
G+I Q S+V L+ + ++LDMCAAPG KT + L
Sbjct: 139 GDINRQESVSMVPPLLLNVESHHKVLDMCAAPGSKTAQLLEAL 181
>TAIR|locus:2041213 [details] [associations]
symbol:AT2G22400 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008168 "methyltransferase activity"
evidence=IEA] InterPro:IPR018314 InterPro:IPR023270 PRINTS:PR02011
PROSITE:PS01153 PROSITE:PS51606 Pfam:PF01189 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003723 eggNOG:COG0144
HOGENOM:HOG000205147 KO:K15334 GO:GO:0016428 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HSSP:O50082 EMBL:AY099759
IPI:IPI00536759 RefSeq:NP_850024.1 UniGene:At.39441
ProteinModelPortal:Q8L601 SMR:Q8L601 STRING:Q8L601 PaxDb:Q8L601
PRIDE:Q8L601 EnsemblPlants:AT2G22400.1 GeneID:816771
KEGG:ath:AT2G22400 TAIR:At2g22400 InParanoid:Q8L601 OMA:QTKRMCT
PhylomeDB:Q8L601 ProtClustDB:CLSN2918060 Genevestigator:Q8L601
Uniprot:Q8L601
Length = 808
Score = 106 (42.4 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 32/88 (36%), Positives = 48/88 (54%)
Query: 417 NSKGFSPN------SFDRVLLDAPCSALG-LR--PRLFAAEETIQSLRNHGKYQRRMFDQ 467
+ KG S N +FDRVL D PCS G LR P ++ + H Q + +
Sbjct: 267 SEKGISENMPINQLAFDRVLCDVPCSGDGTLRKAPDIWRKWNSGMGNGLHS-LQIILAMR 325
Query: 468 AVQLVRPGGIIVYSTCTINPGENEALCA 495
+ L++ GG ++YSTC++NP E+EA+ A
Sbjct: 326 GLSLLKVGGKMIYSTCSMNPVEDEAVVA 353
Score = 79 (32.9 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
G I Q S+V LD +LDMCAAPG KT + ++ + E
Sbjct: 165 GNITRQEAVSMVPPLFLDVHPDHFVLDMCAAPGSKTFQLLEIIHEASE 212
Score = 54 (24.1 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 8 SYSPLLRWNPQVEEYFIRA--YGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLL 65
++ P++ NP EEY+ + A+ + + L +P + RVN+ D++I L
Sbjct: 46 TWEPIVTVNPNFEEYYKKQGIVKAEEWDLFMEILRKP-LPAAFRVNSNGQFCDEIISILE 104
Query: 66 AIIQNSGSSEA 76
S +EA
Sbjct: 105 NDFMKSLQAEA 115
>UNIPROTKB|Q0C183 [details] [associations]
symbol:HNE_1806 "NOL1/NOP2/sun domain protein"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01189 EMBL:CP000158 GenomeReviews:CP000158_GR eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 KO:K03500
HOGENOM:HOG000037301 RefSeq:YP_760510.1 ProteinModelPortal:Q0C183
STRING:Q0C183 GeneID:4287178 KEGG:hne:HNE_1806 PATRIC:32216439
OMA:RRLAPIH ProtClustDB:CLSK2531756
BioCyc:HNEP228405:GI69-1834-MONOMER Uniprot:Q0C183
Length = 435
Score = 102 (41.0 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
+P+F +G + +Q+ S + A A + + GE++LD CA GGKT A+A+ + +G++ A
Sbjct: 204 IPAFS---KGWVEVQDAGSQIAAAAANAKPGEQVLDFCAGGGGKTLALAAPMGGKGQIFA 260
Query: 292 VD 293
D
Sbjct: 261 YD 262
Score = 81 (33.6 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 427 DRVLLDAPCSALGLRPRLFAAEETIQ--SLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCT 484
D V +DAPC+ G R ++ ++ L + QR + A + V+PGG ++Y+TC+
Sbjct: 302 DLVFVDAPCTGTGTWRRRPDSKWRVRPNQLGKRIEDQRGILIDAARFVKPGGRLLYATCS 361
Query: 485 INPGENE 491
E+E
Sbjct: 362 FLIEEDE 368
Score = 43 (20.2 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 25 RAYGADHFSRISKALTRPSCYSCIRVNTLKTTTD 58
RA+G D + R +RVN LKT T+
Sbjct: 135 RAFGEDTVAEAQAMAVRADVD--LRVNALKTDTE 166
>GENEDB_PFALCIPARUM|PFL1475w [details] [associations]
symbol:PFL1475w "sun-family protein, putative"
species:5833 "Plasmodium falciparum" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0008168 "methyltransferase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF01189 EMBL:AE014188 GO:GO:0008168 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 RefSeq:XP_001350701.1
ProteinModelPortal:Q8I5B4 EnsemblProtists:PFL1475w:mRNA
GeneID:811347 KEGG:pfa:PFL1475w EuPathDB:PlasmoDB:PF3D7_1230600
HOGENOM:HOG000037301 OMA:AILRHRR ProtClustDB:CLSZ2432952
Uniprot:Q8I5B4
Length = 376
Score = 98 (39.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 427 DRVLLDAPCSALG-LR--PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTC 483
D V++DAPC+ G LR P + + T L ++ K QR +F+ A+ ++ G IVY TC
Sbjct: 270 DVVIVDAPCTGTGALRRNPEM-KYKFTNNKLYDYVKTQREIFENALLYLKKNGKIVYITC 328
Query: 484 TINPGEN 490
+I EN
Sbjct: 329 SILDAEN 335
Score = 88 (36.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L + ++ +G +Q+ S + + + G+++LD CA GGKT A + L+ + G++
Sbjct: 170 LKNIHEYKKGYFEIQDEASQIVSSKIPVHPGDKVLDYCAGSGGKTLAFSMLMENTGKIYL 229
Query: 292 VD 293
D
Sbjct: 230 HD 231
>UNIPROTKB|Q8I5B4 [details] [associations]
symbol:PFL1475w "Sun-family protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008152 "metabolic process"
evidence=ISS] [GO:0008168 "methyltransferase activity"
evidence=ISS] [GO:0032259 "methylation" evidence=ISS] Pfam:PF01189
EMBL:AE014188 GO:GO:0008168 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 RefSeq:XP_001350701.1 ProteinModelPortal:Q8I5B4
EnsemblProtists:PFL1475w:mRNA GeneID:811347 KEGG:pfa:PFL1475w
EuPathDB:PlasmoDB:PF3D7_1230600 HOGENOM:HOG000037301 OMA:AILRHRR
ProtClustDB:CLSZ2432952 Uniprot:Q8I5B4
Length = 376
Score = 98 (39.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 427 DRVLLDAPCSALG-LR--PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTC 483
D V++DAPC+ G LR P + + T L ++ K QR +F+ A+ ++ G IVY TC
Sbjct: 270 DVVIVDAPCTGTGALRRNPEM-KYKFTNNKLYDYVKTQREIFENALLYLKKNGKIVYITC 328
Query: 484 TINPGEN 490
+I EN
Sbjct: 329 SILDAEN 335
Score = 88 (36.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L + ++ +G +Q+ S + + + G+++LD CA GGKT A + L+ + G++
Sbjct: 170 LKNIHEYKKGYFEIQDEASQIVSSKIPVHPGDKVLDYCAGSGGKTLAFSMLMENTGKIYL 229
Query: 292 VD 293
D
Sbjct: 230 HD 231
>UNIPROTKB|Q9KRY1 [details] [associations]
symbol:rsmF "Ribosomal RNA small subunit methyltransferase
F" species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_01579
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023545
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0031167 GO:GO:0008649
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 KO:K11392 OMA:VANEYSA ProtClustDB:PRK11933
PIR:A82193 RefSeq:NP_231143.1 ProteinModelPortal:Q9KRY1 SMR:Q9KRY1
DNASU:2614008 GeneID:2614008 KEGG:vch:VC1502 PATRIC:20082060
Uniprot:Q9KRY1
Length = 473
Score = 144 (55.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 37/119 (31%), Positives = 60/119 (50%)
Query: 378 VSNEKGVERTYVSKADTXXXXXXXXXXXXXXQCLGGRAENSKGFSPNSFDRVLLDAPCSA 437
V+NE R V A+ C+ G G+ P FD VL+DAPCS
Sbjct: 144 VANEFSASRVKVLHANIERCGIRNTALSNFDGCVFG------GWLPERFDAVLIDAPCSG 197
Query: 438 LG-LRPRLFAAEE-TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALC 494
G +R A + +++S+++ Q+ + + A Q ++ GG +VYSTCT++ EN+ +C
Sbjct: 198 EGTIRKDPDAMKNWSLESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQQVC 256
Score = 40 (19.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 38 ALTRPSCYSCIRVNTLKTTTDDVIQK 63
A RP S IRVNTLK + + Q+
Sbjct: 31 ACQRPLRKS-IRVNTLKISVAEFCQR 55
>TIGR_CMR|VC_1502 [details] [associations]
symbol:VC_1502 "NOL1/NOP2/sun family protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01579 InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023545 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0031167
GO:GO:0008649 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 TIGRFAMs:TIGR00446 KO:K11392 OMA:VANEYSA
ProtClustDB:PRK11933 PIR:A82193 RefSeq:NP_231143.1
ProteinModelPortal:Q9KRY1 SMR:Q9KRY1 DNASU:2614008 GeneID:2614008
KEGG:vch:VC1502 PATRIC:20082060 Uniprot:Q9KRY1
Length = 473
Score = 144 (55.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 37/119 (31%), Positives = 60/119 (50%)
Query: 378 VSNEKGVERTYVSKADTXXXXXXXXXXXXXXQCLGGRAENSKGFSPNSFDRVLLDAPCSA 437
V+NE R V A+ C+ G G+ P FD VL+DAPCS
Sbjct: 144 VANEFSASRVKVLHANIERCGIRNTALSNFDGCVFG------GWLPERFDAVLIDAPCSG 197
Query: 438 LG-LRPRLFAAEE-TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALC 494
G +R A + +++S+++ Q+ + + A Q ++ GG +VYSTCT++ EN+ +C
Sbjct: 198 EGTIRKDPDAMKNWSLESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQQVC 256
Score = 40 (19.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 38 ALTRPSCYSCIRVNTLKTTTDDVIQK 63
A RP S IRVNTLK + + Q+
Sbjct: 31 ACQRPLRKS-IRVNTLKISVAEFCQR 55
>UNIPROTKB|Q96CB9 [details] [associations]
symbol:NSUN4 "5-methylcytosine rRNA methyltransferase
NSUN4" species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IDA] PROSITE:PS01153 Pfam:PF01189 GO:GO:0005739
EMBL:CH471059 GO:GO:0005762 GO:GO:0008168 EMBL:AL122001 PDB:4FP9
PDB:4FZV PDBsum:4FP9 PDBsum:4FZV eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HOGENOM:HOG000017426
HOVERGEN:HBG106892 CTD:387338 OMA:EPKFPAT OrthoDB:EOG42V8GP
EMBL:AK021577 EMBL:AK057420 EMBL:AK291741 EMBL:AK295003
EMBL:BC014441 EMBL:BC016907 IPI:IPI00303944 IPI:IPI00847475
IPI:IPI00847563 IPI:IPI01012870 RefSeq:NP_001243056.1
RefSeq:NP_001243057.1 RefSeq:NP_950245.2 UniGene:Hs.163424
ProteinModelPortal:Q96CB9 SMR:Q96CB9 DIP:DIP-58104N IntAct:Q96CB9
MINT:MINT-1474456 STRING:Q96CB9 PhosphoSite:Q96CB9 DMDM:152125805
PaxDb:Q96CB9 PRIDE:Q96CB9 Ensembl:ENST00000474844
Ensembl:ENST00000536062 GeneID:387338 KEGG:hsa:387338
UCSC:uc001cpr.1 GeneCards:GC01P046805 HGNC:HGNC:31802 HPA:HPA027958
HPA:HPA028489 neXtProt:NX_Q96CB9 PharmGKB:PA134953046
InParanoid:Q96CB9 PhylomeDB:Q96CB9 GenomeRNAi:387338 NextBio:101304
ArrayExpress:Q96CB9 Bgee:Q96CB9 CleanEx:HS_NSUN4
Genevestigator:Q96CB9 Uniprot:Q96CB9
Length = 384
Score = 97 (39.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI--ASLLRDEGEVVAVDRSHNKV 299
E +L + S++ AL Q G+ +LD+CAAPGGKT A+ R+ + A D S +++
Sbjct: 154 EYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRN---LAANDLSPSRI 210
Query: 300 MDIQKL 305
+QK+
Sbjct: 211 ARLQKI 216
Score = 86 (35.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 424 NSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQA-VQLV-------RPG 475
+++DRVL+D PC+ R L E I + K +R++ VQL+ +PG
Sbjct: 247 DTYDRVLVDVPCTTD--RHSLHEEENNI--FKRSRKKERQILPVLQVQLLAAGLLATKPG 302
Query: 476 GIIVYSTCTINPGENE 491
G +VYSTC+++ +NE
Sbjct: 303 GHVVYSTCSLSHLQNE 318
>WB|WBGene00021686 [details] [associations]
symbol:Y48G8AL.5 species:6239 "Caenorhabditis elegans"
[GO:0016428 "tRNA (cytosine-5-)-methyltransferase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS51606 Pfam:PF01189
GO:GO:0000003 eggNOG:COG0144 GeneTree:ENSGT00660000095589
HOGENOM:HOG000205147 GO:GO:0016428 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 KO:K15335 EMBL:FO081800
HSSP:O50082 ProteinModelPortal:Q9BL15 SMR:Q9BL15 STRING:Q9BL15
PaxDb:Q9BL15 EnsemblMetazoa:Y48G8AL.5 KEGG:cel:CELE_Y48G8AL.5
UCSC:Y48G8AL.5 CTD:171697 WormBase:Y48G8AL.5 InParanoid:Q9BL15
OMA:VHQSKRL NextBio:872345 Uniprot:Q9BL15
Length = 684
Score = 102 (41.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 426 FDRVLLDAPCSALG-LR--PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
FDRVL D CS G LR P ++ L H + Q + + Q ++ GG +VYST
Sbjct: 251 FDRVLADVICSGDGTLRKNPEIWKKWTPQDGLGLH-RMQIAIARKGAQQLKVGGRMVYST 309
Query: 483 CTINPGENEALCA 495
C++NP E+EA+ A
Sbjct: 310 CSMNPIEDEAVVA 322
Score = 87 (35.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 222 AVDMHNRIFQLPSFYDVLE---GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
AV H + QL +F V E G + Q S++ L P +LD+CAAPG KTT
Sbjct: 128 AVRSHPILAQLHNFL-VTEAELGNLSRQEAVSMIPPLLLAPTSEHFVLDLCAAPGSKTTQ 186
Query: 279 IASLLRDEGE 288
+ ++ + E
Sbjct: 187 LLEMIHENEE 196
>MGI|MGI:1919431 [details] [associations]
symbol:Nsun4 "NOL1/NOP2/Sun domain family, member 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] PROSITE:PS01153 Pfam:PF01189 MGI:MGI:1919431
GO:GO:0005762 GO:GO:0008168 EMBL:AL627105 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
GeneTree:ENSGT00660000095341 HOGENOM:HOG000017426
HOVERGEN:HBG106892 CTD:387338 OMA:EPKFPAT OrthoDB:EOG42V8GP
EMBL:AK009285 EMBL:AK012994 EMBL:BC024628 IPI:IPI00110238
IPI:IPI00112095 RefSeq:NP_082418.1 UniGene:Mm.282560
ProteinModelPortal:Q9CZ57 SMR:Q9CZ57 PhosphoSite:Q9CZ57
PRIDE:Q9CZ57 Ensembl:ENSMUST00000030474 Ensembl:ENSMUST00000030475
GeneID:72181 KEGG:mmu:72181 UCSC:uc008ufu.2 UCSC:uc012djh.1
InParanoid:Q9CZ57 NextBio:335641 Bgee:Q9CZ57 CleanEx:MM_NSUN4
Genevestigator:Q9CZ57 Uniprot:Q9CZ57
Length = 381
Score = 91 (37.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
+ +L + S++ AL Q G+ +LD+CAAPGGKT A+
Sbjct: 151 DYYLMDAASLLPVLALGLQHGDTVLDLCAAPGGKTLAL 188
Score = 91 (37.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 424 NSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQA-VQLV-------RPG 475
+++DRVL+D PC+ R L E I + K +R+M VQL+ +PG
Sbjct: 244 DTYDRVLVDVPCTTD--RHSLHEEENNI--FQRSRKKERQMLPMLQVQLLAAGLLATKPG 299
Query: 476 GIIVYSTCTINPGENE 491
G +VYSTC+++ +NE
Sbjct: 300 GHVVYSTCSLSHLQNE 315
>UNIPROTKB|Q0V8R7 [details] [associations]
symbol:NSUN4 "5-methylcytosine rRNA methyltransferase
NSUN4" species:9913 "Bos taurus" [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005762 GO:GO:0008168
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
GeneTree:ENSGT00660000095341 HOGENOM:HOG000017426
HOVERGEN:HBG106892 EMBL:BT026151 EMBL:DY454541 IPI:IPI00706084
RefSeq:NP_001178310.1 UniGene:Bt.36843 ProteinModelPortal:Q0V8R7
PRIDE:Q0V8R7 Ensembl:ENSBTAT00000021120 GeneID:618779
KEGG:bta:618779 CTD:387338 InParanoid:Q0V8R7 OMA:EPKFPAT
OrthoDB:EOG42V8GP NextBio:20901346 Uniprot:Q0V8R7
Length = 384
Score = 91 (37.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
+ +L + S++ AL Q G+ +LD+CAAPGGKT A+
Sbjct: 154 DYYLMDAASLLPVLALGLQPGDTVLDLCAAPGGKTLAL 191
Score = 91 (37.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 424 NSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQA-VQLV-------RPG 475
+++DRVL+D PC+ R L E +I + K +R+M VQL+ +PG
Sbjct: 247 DTYDRVLVDVPCTTD--RHSLHEEENSI--FQRSRKKERQMLPVLQVQLLAAGLLATKPG 302
Query: 476 GIIVYSTCTINPGENE 491
G IVYSTC+++ +NE
Sbjct: 303 GHIVYSTCSLSHLQNE 318
>TAIR|locus:2140094 [details] [associations]
symbol:AT4G40000 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA] InterPro:IPR018314 InterPro:IPR023270
PRINTS:PR02011 PROSITE:PS01153 PROSITE:PS51606 Pfam:PF01189
EMBL:CP002687 GO:GO:0003723 GO:GO:0016428 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 UniGene:At.1649 UniGene:At.48966
IPI:IPI00542189 RefSeq:NP_195710.3 ProteinModelPortal:F4JJ52
SMR:F4JJ52 PRIDE:F4JJ52 EnsemblPlants:AT4G40000.1 GeneID:830161
KEGG:ath:AT4G40000 OMA:ECEANCC Uniprot:F4JJ52
Length = 783
Score = 103 (41.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 29/73 (39%), Positives = 42/73 (57%)
Query: 426 FDRVLLDAPCSALG-LR--PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
FDRVL D PCS G LR P ++ + H Q + + + L++ GG +VYST
Sbjct: 274 FDRVLCDVPCSGDGTLRKAPDIWRRWNSGSGNGLHS-LQVVLAMRGLSLLKVGGRMVYST 332
Query: 483 CTINPGENEALCA 495
C++NP E+EA+ A
Sbjct: 333 CSMNPIEDEAVVA 345
Score = 86 (35.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 27/111 (24%), Positives = 47/111 (42%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + Q S+V LD +LDMCAAPG KT + ++ + E ++
Sbjct: 158 GNMTRQESVSMVPPLFLDVHPDHFVLDMCAAPGSKTFQLLEIIHESSEPGSLPNGMVVAN 217
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTS 351
D+ + + + T + + NE P+ CN+K + S+T+
Sbjct: 218 DVDYKRSNLLIH--QTKRTCTTNLMVTNNEGQHFPS-CNTKRTLSVASETN 265
>UNIPROTKB|F1S3W1 [details] [associations]
symbol:NSUN4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IEA] Pfam:PF01189 GO:GO:0005762 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 GeneTree:ENSGT00660000095341
OMA:EPKFPAT EMBL:CU694667 RefSeq:XP_003128070.1 UniGene:Ssc.37517
Ensembl:ENSSSCT00000004317 GeneID:100524686 KEGG:ssc:100524686
Uniprot:F1S3W1
Length = 383
Score = 90 (36.7 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
+ +L + S++ AL Q G+ +LD+CAAPGGKT A+
Sbjct: 153 DYYLMDAASLLPVLALGLQPGDTVLDLCAAPGGKTLAM 190
Score = 89 (36.4 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 424 NSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQA-VQLV-------RPG 475
+++DRVL+D PC+ R L E I + K +R+M VQL+ +PG
Sbjct: 246 DTYDRVLVDVPCTTD--RHSLHEEENNI--FQRSRKRERQMLPVLQVQLLAAGLLATKPG 301
Query: 476 GIIVYSTCTINPGENE 491
G +VYSTC+++ +NE
Sbjct: 302 GHVVYSTCSLSHLQNE 317
>POMBASE|SPAC2C4.06c [details] [associations]
symbol:SPAC2C4.06c "tRNA (cytosine-5-)-methyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008168
"methyltransferase activity" evidence=IEA] PROSITE:PS01153
PomBase:SPAC2C4.06c Pfam:PF01189 EMBL:CU329670 GO:GO:0005730
GO:GO:0008168 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 HSSP:Q96P11 HOGENOM:HOG000203203 PIR:T38517
RefSeq:NP_594509.3 STRING:O14039 EnsemblFungi:SPAC2C4.06c.1
GeneID:2542630 OrthoDB:EOG469V3J NextBio:20803679 Uniprot:O14039
Length = 460
Score = 95 (38.5 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 221 IAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGE--RILDMCAAPGGKTTA 278
IA+D I + S Y EG++ +Q+ S A L G I+D CAAPG KTT
Sbjct: 176 IAIDPSFPIVE-NSLYK--EGKVIIQDKASCFPAAVLAGLTGHVGDIIDGCAAPGNKTTH 232
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCIT 315
+A+ + + A +R +V ++K+ G +T
Sbjct: 233 LAACF-PKSHIFAFERDAKRVQTLRKMVGISGANNVT 268
Score = 65 (27.9 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 429 VLLDAPCSALGLRPR---LFAAEETI----QSLRNHGKYQRRMFDQAVQLVRPGGIIVYS 481
+LLD CS G+ R L E+ + + L N +Q + A+Q + YS
Sbjct: 290 ILLDPSCSGSGIVSRQDYLLGNEQDVTEDTERLENLCSFQSTILKHALQFPNCRHV-TYS 348
Query: 482 TCTINPGENE-ALC 494
TC+++ ENE +C
Sbjct: 349 TCSVHRLENEQVVC 362
Score = 56 (24.8 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 38 ALTRP-SCYSCIRVNTLKTTTDDVIQKL 64
AL P S +R+NT+K+T D+V+Q L
Sbjct: 123 ALKNPVSLPRWLRINTIKSTKDEVLQGL 150
>TAIR|locus:2133832 [details] [associations]
symbol:AT4G26600 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=RCA] InterPro:IPR011023
InterPro:IPR018314 InterPro:IPR023273 PRINTS:PR02012
PROSITE:PS01153 Pfam:PF01189 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005730 GO:GO:0003723 GO:GO:0006364
GO:GO:0008757 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 HOGENOM:HOG000224258 KO:K14835 TIGRFAMs:TIGR00446
HSSP:O50082 OMA:SANLHRM EMBL:AY070425 EMBL:AY133836 IPI:IPI00533545
RefSeq:NP_194390.2 UniGene:At.28358 ProteinModelPortal:Q8VYM6
SMR:Q8VYM6 STRING:Q8VYM6 PaxDb:Q8VYM6 PRIDE:Q8VYM6
EnsemblPlants:AT4G26600.1 GeneID:828767 KEGG:ath:AT4G26600
TAIR:At4g26600 InParanoid:Q8VYM6 PhylomeDB:Q8VYM6
ProtClustDB:CLSN2690331 Genevestigator:Q8VYM6 Uniprot:Q8VYM6
Length = 671
Score = 131 (51.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 38/130 (29%), Positives = 66/130 (50%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ+ S + AL P++ ER++DM AAPGGKTT +A+L+++ G + A +
Sbjct: 318 EYLAGFYMLQSASSFLPVMALAPREKERVVDMAAAPGGKTTYVAALMKNTGIIYANEMKV 377
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESN------DEPNMCN-----SKDNNY 345
++ + MG+ D + + +S+ D P C+ SKD +
Sbjct: 378 PRLKSLSANLHRMGVTNTIVCNYDGRELTKVLGQSSVDRVLLDAP--CSGTGVISKDESV 435
Query: 346 ITSQTSDSMK 355
TS+++D +K
Sbjct: 436 KTSKSADDIK 445
Score = 124 (48.7 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 32/87 (36%), Positives = 48/87 (55%)
Query: 413 GRAENSKGFSPNSFDRVLLDAPCSALGL--RPRLFAAEETIQSLRNHGKYQRRMFDQAVQ 470
GR E +K +S DRVLLDAPCS G+ + ++ ++ Q+++ A+
Sbjct: 402 GR-ELTKVLGQSSVDRVLLDAPCSGTGVISKDESVKTSKSADDIKKFAHLQKQLILGAID 460
Query: 471 LV----RPGGIIVYSTCTINPGENEAL 493
LV + GG IVYSTC++ ENEA+
Sbjct: 461 LVDANSKTGGYIVYSTCSVMIPENEAV 487
Score = 41 (19.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 48 IRVNTLKTTTDDVIQKLL 65
IR NTLKT D+ LL
Sbjct: 270 IRTNTLKTRRRDLADILL 287
>UNIPROTKB|G3V1R4 [details] [associations]
symbol:NSUN2 "NOL1/NOP2/Sun domain family, member 2,
isoform CRA_b" species:9606 "Homo sapiens" [GO:0016428 "tRNA
(cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR023270 PRINTS:PR02011
Pfam:PF01189 GO:GO:0005634 EMBL:CH471102 GO:GO:0016428
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 EMBL:AC010366
EMBL:AC027334 UniGene:Hs.481526 HGNC:HGNC:25994 ChiTaRS:NSUN2
ProteinModelPortal:G3V1R4 SMR:G3V1R4 PRIDE:G3V1R4
Ensembl:ENST00000539938 ArrayExpress:G3V1R4 Bgee:G3V1R4
Uniprot:G3V1R4
Length = 531
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 426 FDRVLLDAPCSALG-LRPRLFAAEE--TIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482
+DR+L D PCS G +R + ++ T+ SL+ HG Q R+ + + + GG +VYST
Sbjct: 26 YDRILCDVPCSGDGTMRKNIDVWKKWTTLNSLQLHG-LQLRIATRGAEQLAEGGRMVYST 84
Query: 483 CTINPGENEALCA 495
C++NP E+EA+ A
Sbjct: 85 CSLNPIEDEAVIA 97
>SGD|S000004967 [details] [associations]
symbol:YNL022C "Putative cytosine 5-methyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IDA] [GO:0016428 "tRNA (cytosine-5-)-methyltransferase
activity" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] SGD:S000004967 Pfam:PF01189 GO:GO:0005634
EMBL:BK006947 KO:K03235 RefSeq:NP_014384.3 GeneID:855718
KEGG:sce:YNL014W RefSeq:NP_014376.3 GeneID:855709 KEGG:sce:YNL022C
KO:K15264 eggNOG:COG0144 GO:GO:0016428 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HOGENOM:HOG000203203
GeneTree:ENSGT00550000074709 OrthoDB:EOG469V3J EMBL:Z71298
PIR:S62934 ProteinModelPortal:P53972 SMR:P53972 IntAct:P53972
MINT:MINT-2491929 STRING:P53972 PaxDb:P53972 PeptideAtlas:P53972
EnsemblFungi:YNL022C CYGD:YNL022c OMA:IQDRASC NextBio:980055
Genevestigator:P53972 GermOnline:YNL022C Uniprot:P53972
Length = 490
Score = 96 (38.9 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE 286
G+I +Q+ S AH L+P + ++D C+APG KTT AS + E
Sbjct: 222 GKIIIQDRASCFPAHILNPGPSDIVIDSCSAPGNKTTHTASYIYPE 267
Score = 70 (29.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 29/87 (33%), Positives = 41/87 (47%)
Query: 410 CLGGRAENSKGFSPNSFDRVLLDAPCSALGLRP---RLFAAEETIQS-LRNHGKYQRRMF 465
C G K F +SF+R +D G+ P F A+E +Q+ L +Q +M
Sbjct: 330 CSGSGIFGRKFF--DSFNRRKIDDKDDDGGIVPDEQEEFIAKEELQTRLAKLSSFQFQMV 387
Query: 466 DQAVQLVRPGGI-IVYSTCTINPGENE 491
A+ P IVYSTC+I+ ENE
Sbjct: 388 KHAMSF--PAAKKIVYSTCSIHAEENE 412
>TAIR|locus:2156902 [details] [associations]
symbol:AT5G66180 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] Pfam:PF01189 EMBL:CP002688 GO:GO:0008168
UniGene:At.47570 UniGene:At.49233 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 IPI:IPI00541665
RefSeq:NP_201419.2 ProteinModelPortal:F4JZ42 SMR:F4JZ42
PRIDE:F4JZ42 EnsemblPlants:AT5G66180.1 GeneID:836750
KEGG:ath:AT5G66180 OMA:DAECTHD InterPro:IPR023269 PRINTS:PR02010
Uniprot:F4JZ42
Length = 395
Score = 89 (36.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311
V+A + P G+ +LD+CAAPG K + LL +G VD + +++ + + + GL
Sbjct: 98 VSALGISP--GDHVLDLCAAPGAKLCMMLDLLGQKGTATGVDVARHRLAACRTMLLKYGL 155
Score = 73 (30.8 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 24/93 (25%), Positives = 43/93 (46%)
Query: 414 RAENSKGFSPNSFDRVLLDAPCSALG---------------LRPRLFAAEETIQSLRNHG 458
R+ + ++ +D+VL+DA C+ G L R+ AE T +L+
Sbjct: 241 RSLDQNDYASYGYDKVLVDAECTHDGSIKHIQKFEQWGWKTLERRVLDAERTDTNLK--- 297
Query: 459 KYQRRMFDQAVQLVRPGGIIVYSTCTINPGENE 491
Q + +L++ G +VYSTC++ +NE
Sbjct: 298 ALQLNLLRNGFRLLKEAGTLVYSTCSLTHAQNE 330
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 495 481 0.00080 119 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 98
No. of states in DFA: 608 (65 KB)
Total size of DFA: 268 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.99u 0.11s 43.10t Elapsed: 00:00:02
Total cpu time: 43.00u 0.11s 43.11t Elapsed: 00:00:02
Start: Tue May 21 11:07:13 2013 End: Tue May 21 11:07:15 2013