Query 011036
Match_columns 495
No_of_seqs 371 out of 2138
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 19:28:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011036.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011036hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fzv_A Putative methyltransfer 100.0 1.7E-44 6E-49 373.4 18.8 170 230-495 115-297 (359)
2 3m4x_A NOL1/NOP2/SUN family pr 100.0 1.3E-40 4.3E-45 354.3 18.7 162 239-495 83-247 (456)
3 2frx_A Hypothetical protein YE 100.0 1.4E-40 4.7E-45 356.1 17.1 161 239-494 93-258 (479)
4 3m6w_A RRNA methylase; rRNA me 100.0 3.6E-40 1.2E-44 351.4 18.5 161 239-495 79-242 (464)
5 1ixk_A Methyltransferase; open 100.0 2.3E-39 7.8E-44 328.3 22.0 160 239-494 96-258 (315)
6 2b9e_A NOL1/NOP2/SUN domain fa 100.0 3.8E-39 1.3E-43 327.2 20.0 164 238-494 79-246 (309)
7 2yxl_A PH0851 protein, 450AA l 100.0 6.8E-38 2.3E-42 332.0 21.8 162 239-494 237-401 (450)
8 1sqg_A SUN protein, FMU protei 100.0 3E-37 1E-41 324.9 22.1 160 239-494 224-386 (429)
9 3ajd_A Putative methyltransfer 100.0 2.3E-35 7.7E-40 292.5 16.7 163 239-494 61-223 (274)
10 4dmg_A Putative uncharacterize 99.8 2.5E-18 8.6E-23 179.7 13.8 163 218-491 173-335 (393)
11 1wxx_A TT1595, hypothetical pr 99.7 1.6E-17 5.5E-22 171.9 10.5 162 220-490 172-333 (382)
12 3id6_C Fibrillarin-like rRNA/T 99.7 4.6E-17 1.6E-21 158.9 12.0 65 257-323 72-136 (232)
13 2as0_A Hypothetical protein PH 99.7 5.6E-17 1.9E-21 168.4 12.6 163 221-490 180-343 (396)
14 3v97_A Ribosomal RNA large sub 99.7 6.9E-17 2.4E-21 180.1 12.4 166 218-491 499-666 (703)
15 3c0k_A UPF0064 protein YCCW; P 99.7 6.1E-17 2.1E-21 168.3 9.4 163 220-489 182-346 (396)
16 2b78_A Hypothetical protein SM 99.6 5.1E-16 1.7E-20 161.3 11.4 163 221-489 174-338 (385)
17 2igt_A SAM dependent methyltra 99.6 1.3E-15 4.6E-20 155.4 12.7 166 219-488 110-279 (332)
18 3axs_A Probable N(2),N(2)-dime 99.6 3E-15 1E-19 156.5 10.3 80 245-324 31-117 (392)
19 1i1n_A Protein-L-isoaspartate 99.5 2.9E-14 9.8E-19 135.0 12.0 64 259-322 75-143 (226)
20 2dul_A N(2),N(2)-dimethylguano 99.5 1.8E-14 6.2E-19 149.8 10.7 79 245-324 31-124 (378)
21 3tma_A Methyltransferase; thum 99.5 2.1E-13 7.1E-18 139.2 15.4 125 254-485 196-320 (354)
22 3lpm_A Putative methyltransfer 99.5 2.6E-13 9E-18 132.1 14.2 72 250-323 37-110 (259)
23 2b3t_A Protein methyltransfera 99.5 1.7E-13 5.8E-18 134.7 10.4 126 260-487 108-243 (276)
24 2frn_A Hypothetical protein PH 99.4 1.7E-13 5.9E-18 135.7 10.2 63 259-323 123-186 (278)
25 1yb2_A Hypothetical protein TA 99.4 2.2E-13 7.5E-18 134.0 10.8 82 240-321 89-171 (275)
26 1o54_A SAM-dependent O-methylt 99.4 1E-12 3.4E-17 129.1 14.9 72 252-323 103-175 (277)
27 3mti_A RRNA methylase; SAM-dep 99.4 4.8E-13 1.7E-17 122.5 11.8 61 258-321 19-79 (185)
28 3u81_A Catechol O-methyltransf 99.4 7.9E-13 2.7E-17 125.5 13.5 79 246-324 43-122 (221)
29 3eey_A Putative rRNA methylase 99.4 1E-12 3.5E-17 121.5 12.7 67 257-323 18-85 (197)
30 3tfw_A Putative O-methyltransf 99.4 9.7E-13 3.3E-17 127.8 13.1 78 248-325 50-128 (248)
31 4df3_A Fibrillarin-like rRNA/T 99.4 4.8E-13 1.6E-17 130.7 9.9 64 257-322 73-136 (233)
32 3p9n_A Possible methyltransfer 99.4 1E-11 3.4E-16 114.7 16.8 63 260-324 43-105 (189)
33 3evz_A Methyltransferase; NYSG 99.4 8.1E-13 2.8E-17 125.1 9.4 61 258-321 52-113 (230)
34 3e05_A Precorrin-6Y C5,15-meth 99.4 8.7E-12 3E-16 116.3 15.6 81 241-323 21-101 (204)
35 1i9g_A Hypothetical protein RV 99.4 3E-12 1E-16 125.0 12.7 73 251-323 89-164 (280)
36 3duw_A OMT, O-methyltransferas 99.4 3E-12 1E-16 120.9 12.2 76 249-324 46-122 (223)
37 3njr_A Precorrin-6Y methylase; 99.4 9.5E-12 3.2E-16 117.5 14.9 70 251-323 45-115 (204)
38 3bt7_A TRNA (uracil-5-)-methyl 99.4 2.4E-12 8.2E-17 132.6 11.6 66 256-325 209-274 (369)
39 2gpy_A O-methyltransferase; st 99.3 6.4E-13 2.2E-17 126.7 6.5 82 241-323 34-116 (233)
40 3mb5_A SAM-dependent methyltra 99.3 4.8E-12 1.6E-16 121.9 12.5 72 251-322 83-155 (255)
41 3k6r_A Putative transferase PH 99.3 1.5E-12 5.2E-17 130.2 9.2 63 259-323 123-186 (278)
42 3a27_A TYW2, uncharacterized p 99.3 2.3E-12 7.8E-17 127.3 9.6 80 243-323 101-180 (272)
43 3dou_A Ribosomal RNA large sub 99.3 3.7E-12 1.3E-16 119.6 10.0 51 259-323 23-73 (191)
44 3dr5_A Putative O-methyltransf 99.3 3.5E-12 1.2E-16 122.4 9.7 70 255-324 50-121 (221)
45 3tr6_A O-methyltransferase; ce 99.3 3.7E-12 1.3E-16 120.2 9.4 76 250-325 53-129 (225)
46 2ift_A Putative methylase HI07 99.3 1.3E-11 4.6E-16 115.9 12.9 62 261-324 53-116 (201)
47 3c3y_A Pfomt, O-methyltransfer 99.3 7.3E-12 2.5E-16 120.9 11.0 74 252-325 61-135 (237)
48 3hm2_A Precorrin-6Y C5,15-meth 99.3 1.7E-11 5.7E-16 110.7 12.3 69 252-322 16-85 (178)
49 2fpo_A Methylase YHHF; structu 99.3 1.8E-11 6.1E-16 115.1 12.7 62 261-324 54-115 (202)
50 2b25_A Hypothetical protein; s 99.3 1.6E-11 5.5E-16 124.1 13.1 72 251-322 95-177 (336)
51 3lbf_A Protein-L-isoaspartate 99.3 1.4E-11 4.9E-16 114.9 11.4 81 240-323 56-136 (210)
52 4dzr_A Protein-(glutamine-N5) 99.3 7.5E-13 2.6E-17 122.5 2.4 62 260-323 29-90 (215)
53 1nt2_A Fibrillarin-like PRE-rR 99.3 1.5E-11 5E-16 117.1 11.3 62 257-321 53-114 (210)
54 2qm3_A Predicted methyltransfe 99.3 1.9E-11 6.5E-16 126.0 13.0 80 242-323 152-232 (373)
55 1nv8_A HEMK protein; class I a 99.3 6.8E-12 2.3E-16 125.0 8.9 63 259-323 121-184 (284)
56 2pwy_A TRNA (adenine-N(1)-)-me 99.3 2.6E-11 8.7E-16 116.4 12.6 72 252-323 87-159 (258)
57 3r3h_A O-methyltransferase, SA 99.3 2.6E-12 8.8E-17 124.9 5.6 81 245-325 44-125 (242)
58 2yx1_A Hypothetical protein MJ 99.3 9E-12 3.1E-16 126.9 9.8 60 260-323 194-254 (336)
59 1dus_A MJ0882; hypothetical pr 99.3 4.8E-11 1.6E-15 108.3 13.4 70 250-322 41-112 (194)
60 2yvl_A TRMI protein, hypotheti 99.2 6.2E-11 2.1E-15 113.0 14.0 67 252-321 82-149 (248)
61 2ozv_A Hypothetical protein AT 99.2 1.8E-11 6.2E-16 119.9 10.0 75 248-323 23-101 (260)
62 3ntv_A MW1564 protein; rossman 99.2 1.3E-11 4.4E-16 118.4 8.5 77 246-323 56-133 (232)
63 2esr_A Methyltransferase; stru 99.2 6.1E-11 2.1E-15 107.7 12.0 64 259-324 29-93 (177)
64 1dl5_A Protein-L-isoaspartate 99.2 4.8E-11 1.6E-15 120.0 12.1 72 252-323 66-137 (317)
65 3gdh_A Trimethylguanosine synt 99.2 6.2E-11 2.1E-15 113.1 12.2 73 249-324 66-139 (241)
66 3c3p_A Methyltransferase; NP_9 99.2 1.6E-11 5.6E-16 115.1 8.0 74 251-324 46-120 (210)
67 2plw_A Ribosomal RNA methyltra 99.2 4.6E-11 1.6E-15 110.5 9.9 54 259-323 20-74 (201)
68 2fhp_A Methylase, putative; al 99.2 1.8E-10 6.3E-15 104.7 13.7 64 259-324 42-106 (187)
69 3dh0_A SAM dependent methyltra 99.2 5.8E-11 2E-15 111.1 10.6 71 252-322 28-98 (219)
70 2fca_A TRNA (guanine-N(7)-)-me 99.2 6E-11 2E-15 112.6 10.7 63 260-323 37-99 (213)
71 1sui_A Caffeoyl-COA O-methyltr 99.2 7.4E-11 2.5E-15 114.9 11.5 76 250-325 68-144 (247)
72 1yzh_A TRNA (guanine-N(7)-)-me 99.2 2E-10 6.8E-15 108.1 13.8 63 260-323 40-102 (214)
73 1inl_A Spermidine synthase; be 99.2 2.7E-11 9.1E-16 121.4 8.1 63 261-324 90-156 (296)
74 2ipx_A RRNA 2'-O-methyltransfe 99.2 5.7E-11 1.9E-15 113.3 10.0 66 256-323 72-137 (233)
75 1r18_A Protein-L-isoaspartate( 99.2 5.1E-11 1.7E-15 113.2 9.6 71 252-322 73-155 (227)
76 3tm4_A TRNA (guanine N2-)-meth 99.2 7.8E-11 2.7E-15 121.6 11.7 64 259-323 215-279 (373)
77 3vc1_A Geranyl diphosphate 2-C 99.2 3.9E-11 1.3E-15 119.7 9.0 68 253-322 108-177 (312)
78 3dxy_A TRNA (guanine-N(7)-)-me 99.2 1.2E-10 4.2E-15 111.4 11.8 64 260-324 33-96 (218)
79 2pbf_A Protein-L-isoaspartate 99.2 7.5E-11 2.6E-15 111.5 10.1 66 258-323 77-151 (227)
80 4dcm_A Ribosomal RNA large sub 99.2 1.7E-10 5.8E-15 119.5 13.5 73 249-322 210-285 (375)
81 2yxe_A Protein-L-isoaspartate 99.2 2.4E-10 8.1E-15 107.0 13.3 70 252-321 68-137 (215)
82 1xdz_A Methyltransferase GIDB; 99.2 7.2E-11 2.5E-15 113.4 10.0 65 258-323 67-131 (240)
83 3fpf_A Mtnas, putative unchara 99.2 1.7E-10 5.8E-15 116.4 13.0 68 255-323 116-183 (298)
84 3grz_A L11 mtase, ribosomal pr 99.2 1.1E-10 3.7E-15 108.7 10.8 62 259-322 58-119 (205)
85 1g8a_A Fibrillarin-like PRE-rR 99.2 9.2E-11 3.2E-15 111.1 10.4 64 258-323 70-133 (227)
86 1o9g_A RRNA methyltransferase; 99.2 6.8E-11 2.3E-15 114.1 9.6 52 258-309 48-100 (250)
87 3kkz_A Uncharacterized protein 99.2 1.6E-10 5.6E-15 112.0 12.3 61 259-321 44-105 (267)
88 1l3i_A Precorrin-6Y methyltran 99.2 1.9E-10 6.5E-15 104.2 11.9 70 251-323 23-93 (192)
89 3f4k_A Putative methyltransfer 99.2 2.2E-10 7.6E-15 109.7 12.8 62 258-321 43-105 (257)
90 3hem_A Cyclopropane-fatty-acyl 99.2 2.3E-10 7.9E-15 113.2 13.1 67 253-321 64-131 (302)
91 2yxd_A Probable cobalt-precorr 99.1 4.3E-10 1.5E-14 101.3 13.7 69 252-323 26-94 (183)
92 1vl5_A Unknown conserved prote 99.1 9.1E-11 3.1E-15 113.2 9.8 80 239-321 15-94 (260)
93 1xxl_A YCGJ protein; structura 99.1 7.5E-11 2.6E-15 112.9 9.0 74 245-321 5-78 (239)
94 3g89_A Ribosomal RNA small sub 99.1 1.3E-10 4.5E-15 113.5 10.8 64 259-323 78-141 (249)
95 2avd_A Catechol-O-methyltransf 99.1 1.6E-10 5.3E-15 109.3 10.1 71 254-324 62-133 (229)
96 1ws6_A Methyltransferase; stru 99.1 2.5E-10 8.4E-15 102.1 10.8 60 261-324 41-100 (171)
97 4gek_A TRNA (CMO5U34)-methyltr 99.1 1.7E-10 5.8E-15 113.6 10.5 75 246-322 57-133 (261)
98 3cbg_A O-methyltransferase; cy 99.1 2.3E-10 7.7E-15 109.8 11.0 70 255-324 66-136 (232)
99 1ej0_A FTSJ; methyltransferase 99.1 1.4E-10 4.9E-15 102.9 8.9 120 259-485 20-139 (180)
100 1jg1_A PIMT;, protein-L-isoasp 99.1 2.5E-10 8.6E-15 109.1 11.0 80 240-321 70-149 (235)
101 2h1r_A Dimethyladenosine trans 99.1 3.3E-11 1.1E-15 120.9 4.5 74 246-322 27-100 (299)
102 2f8l_A Hypothetical protein LM 99.1 9.8E-11 3.4E-15 119.0 7.8 64 258-322 127-194 (344)
103 1nkv_A Hypothetical protein YJ 99.1 1.7E-10 5.8E-15 110.5 9.0 67 254-322 29-96 (256)
104 2hnk_A SAM-dependent O-methylt 99.1 4.6E-10 1.6E-14 107.6 11.9 73 252-324 51-124 (239)
105 2nyu_A Putative ribosomal RNA 99.1 2E-10 6.9E-15 105.6 8.9 52 259-321 20-80 (196)
106 1uwv_A 23S rRNA (uracil-5-)-me 99.1 6.3E-10 2.2E-14 117.1 13.8 67 254-323 279-345 (433)
107 2jjq_A Uncharacterized RNA met 99.1 1.1E-09 3.9E-14 115.3 14.9 64 256-323 285-348 (425)
108 1zx0_A Guanidinoacetate N-meth 99.1 3.3E-10 1.1E-14 108.2 9.8 62 259-323 58-119 (236)
109 2vdv_E TRNA (guanine-N(7)-)-me 99.1 2.4E-10 8.2E-15 110.3 8.6 64 259-323 47-118 (246)
110 1fbn_A MJ fibrillarin homologu 99.1 3.4E-10 1.2E-14 108.0 9.5 63 257-322 70-132 (230)
111 2xvm_A Tellurite resistance pr 99.1 1.4E-09 4.6E-14 99.7 12.9 70 251-323 22-91 (199)
112 3dmg_A Probable ribosomal RNA 99.1 9E-10 3.1E-14 114.4 13.1 61 259-323 231-291 (381)
113 1wy7_A Hypothetical protein PH 99.1 1.1E-09 3.7E-14 101.8 12.3 63 258-323 46-108 (207)
114 1vbf_A 231AA long hypothetical 99.0 7.7E-10 2.6E-14 104.6 11.1 67 252-323 61-127 (231)
115 3orh_A Guanidinoacetate N-meth 99.0 3.4E-10 1.2E-14 109.1 8.7 62 259-323 58-119 (236)
116 2p41_A Type II methyltransfera 99.0 1E-10 3.5E-15 118.0 5.1 32 259-294 80-111 (305)
117 3bus_A REBM, methyltransferase 99.0 5.7E-10 1.9E-14 108.0 9.2 67 253-321 53-120 (273)
118 3mgg_A Methyltransferase; NYSG 99.0 9.5E-10 3.2E-14 106.8 10.5 68 255-323 31-98 (276)
119 3dlc_A Putative S-adenosyl-L-m 99.0 4.7E-10 1.6E-14 103.9 7.9 66 254-322 37-103 (219)
120 3jwh_A HEN1; methyltransferase 99.0 1.1E-09 3.8E-14 102.7 10.0 68 253-321 21-93 (217)
121 2o57_A Putative sarcosine dime 99.0 9.1E-10 3.1E-14 108.2 9.3 63 258-322 79-142 (297)
122 1ri5_A MRNA capping enzyme; me 99.0 1.1E-09 3.7E-14 106.8 9.7 62 259-322 62-124 (298)
123 3ckk_A TRNA (guanine-N(7)-)-me 99.0 8E-10 2.8E-14 107.0 8.6 63 260-323 45-113 (235)
124 3gu3_A Methyltransferase; alph 99.0 5.1E-10 1.8E-14 110.1 7.2 76 246-322 7-82 (284)
125 2fk8_A Methoxy mycolic acid sy 99.0 2.4E-09 8.2E-14 106.5 12.1 67 253-321 82-149 (318)
126 3ocj_A Putative exported prote 99.0 9.7E-10 3.3E-14 109.2 9.1 67 257-323 114-181 (305)
127 2pjd_A Ribosomal RNA small sub 99.0 1.2E-09 4.2E-14 111.0 9.9 70 250-321 185-254 (343)
128 2ih2_A Modification methylase 99.0 1E-09 3.6E-14 113.2 9.5 74 241-323 19-92 (421)
129 3ujc_A Phosphoethanolamine N-m 99.0 5E-10 1.7E-14 107.2 6.5 65 254-322 48-112 (266)
130 1jsx_A Glucose-inhibited divis 99.0 1.7E-09 5.9E-14 100.3 9.8 61 261-322 65-125 (207)
131 2pxx_A Uncharacterized protein 99.0 2.3E-09 8E-14 99.1 10.5 58 260-321 41-98 (215)
132 2okc_A Type I restriction enzy 99.0 5.7E-10 2E-14 117.6 6.8 83 240-322 150-246 (445)
133 2nxc_A L11 mtase, ribosomal pr 98.9 2.5E-09 8.6E-14 104.3 10.8 61 259-323 118-178 (254)
134 3kr9_A SAM-dependent methyltra 98.9 8.2E-09 2.8E-13 100.2 14.3 64 259-323 13-77 (225)
135 3dtn_A Putative methyltransfer 98.9 1.7E-09 5.8E-14 102.3 9.2 61 259-322 42-102 (234)
136 1kpg_A CFA synthase;, cyclopro 98.9 3.4E-09 1.2E-13 103.6 11.6 66 254-321 57-123 (287)
137 3mq2_A 16S rRNA methyltransfer 98.9 1.4E-09 4.6E-14 102.2 8.3 69 254-323 20-92 (218)
138 3jwg_A HEN1, methyltransferase 98.9 2E-09 7E-14 100.9 9.4 67 254-321 22-93 (219)
139 1ve3_A Hypothetical protein PH 98.9 4.2E-09 1.4E-13 98.6 11.3 58 260-321 37-94 (227)
140 3m70_A Tellurite resistance pr 98.9 4.2E-09 1.4E-13 103.1 11.0 65 255-323 114-178 (286)
141 2kw5_A SLR1183 protein; struct 98.9 6.6E-09 2.3E-13 96.0 11.7 58 259-321 28-85 (202)
142 3g5t_A Trans-aconitate 3-methy 98.9 1.7E-09 5.9E-14 106.8 8.2 65 259-323 34-100 (299)
143 4fsd_A Arsenic methyltransfera 98.9 1.5E-09 5.2E-14 111.9 8.1 65 259-323 81-153 (383)
144 3ou2_A SAM-dependent methyltra 98.9 3.7E-09 1.3E-13 98.2 9.9 61 254-321 39-99 (218)
145 1m6y_A S-adenosyl-methyltransf 98.9 2.6E-09 9E-14 107.8 9.5 69 253-323 18-86 (301)
146 3sm3_A SAM-dependent methyltra 98.9 4E-09 1.4E-13 98.8 9.9 59 260-321 29-92 (235)
147 1zq9_A Probable dimethyladenos 98.9 2E-09 6.7E-14 107.2 8.2 69 252-323 19-88 (285)
148 3ofk_A Nodulation protein S; N 98.9 5.6E-09 1.9E-13 97.5 10.7 67 251-322 41-107 (216)
149 1pjz_A Thiopurine S-methyltran 98.9 9.4E-10 3.2E-14 103.4 5.3 48 257-307 18-65 (203)
150 3bkx_A SAM-dependent methyltra 98.9 5.9E-09 2E-13 100.9 10.8 69 252-320 34-109 (275)
151 1xtp_A LMAJ004091AAA; SGPP, st 98.9 3.3E-09 1.1E-13 101.2 8.7 64 255-322 87-150 (254)
152 2p8j_A S-adenosylmethionine-de 98.9 2.1E-09 7.1E-14 99.6 6.9 61 258-321 20-80 (209)
153 2h00_A Methyltransferase 10 do 98.9 1.5E-08 5.3E-13 97.5 13.2 61 261-322 65-126 (254)
154 2fyt_A Protein arginine N-meth 98.9 3.8E-09 1.3E-13 107.7 9.3 65 255-322 58-123 (340)
155 3g07_A 7SK snRNA methylphospha 98.9 6.1E-09 2.1E-13 103.3 10.5 50 261-311 46-95 (292)
156 3q7e_A Protein arginine N-meth 98.9 3.9E-09 1.3E-13 107.9 9.2 62 259-323 64-126 (349)
157 3gnl_A Uncharacterized protein 98.9 1.9E-08 6.6E-13 98.8 13.8 65 258-323 18-83 (244)
158 2bm8_A Cephalosporin hydroxyla 98.9 7.9E-10 2.7E-14 106.9 3.8 64 254-322 74-140 (236)
159 3lec_A NADB-rossmann superfami 98.9 2.3E-08 7.7E-13 97.5 14.0 65 258-323 18-83 (230)
160 2xyq_A Putative 2'-O-methyl tr 98.9 2.1E-09 7.1E-14 108.1 6.8 51 257-322 59-116 (290)
161 4htf_A S-adenosylmethionine-de 98.9 3.6E-09 1.2E-13 103.5 8.3 60 261-323 68-128 (285)
162 2ex4_A Adrenal gland protein A 98.9 2.7E-09 9.1E-14 101.9 7.1 61 260-322 78-138 (241)
163 2vdw_A Vaccinia virus capping 98.9 7.5E-09 2.6E-13 103.9 10.5 51 260-312 47-97 (302)
164 1mjf_A Spermidine synthase; sp 98.8 8.3E-09 2.8E-13 102.3 10.4 62 260-324 74-146 (281)
165 3g5l_A Putative S-adenosylmeth 98.8 4.6E-09 1.6E-13 100.6 8.3 64 254-322 37-100 (253)
166 2ar0_A M.ecoki, type I restric 98.8 2.4E-09 8.1E-14 116.1 6.8 83 240-322 148-252 (541)
167 3thr_A Glycine N-methyltransfe 98.8 2.1E-09 7.3E-14 105.2 5.2 68 253-323 49-120 (293)
168 3g2m_A PCZA361.24; SAM-depende 98.8 7.7E-09 2.6E-13 102.1 9.0 64 255-322 77-143 (299)
169 2p35_A Trans-aconitate 2-methy 98.8 6.7E-09 2.3E-13 99.3 8.2 70 246-321 18-87 (259)
170 3r0q_C Probable protein argini 98.8 9.9E-09 3.4E-13 105.9 10.0 65 256-323 58-123 (376)
171 3hnr_A Probable methyltransfer 98.8 6.1E-09 2.1E-13 97.3 7.3 59 256-321 40-98 (220)
172 1g6q_1 HnRNP arginine N-methyl 98.8 7E-09 2.4E-13 105.0 8.1 63 257-322 34-97 (328)
173 3d2l_A SAM-dependent methyltra 98.8 2.3E-08 8E-13 94.4 11.2 58 260-322 32-89 (243)
174 3bkw_A MLL3908 protein, S-aden 98.8 7.5E-09 2.6E-13 97.8 7.8 66 252-322 34-99 (243)
175 2yqz_A Hypothetical protein TT 98.8 7E-09 2.4E-13 99.2 7.6 61 257-321 35-95 (263)
176 2y1w_A Histone-arginine methyl 98.8 1.3E-08 4.3E-13 103.9 9.7 65 255-322 44-109 (348)
177 3adn_A Spermidine synthase; am 98.8 7.8E-09 2.7E-13 103.7 7.4 62 261-323 83-149 (294)
178 1ne2_A Hypothetical protein TA 98.8 1.6E-08 5.6E-13 93.6 9.0 58 258-322 48-105 (200)
179 1wzn_A SAM-dependent methyltra 98.8 8E-08 2.7E-12 91.7 14.0 63 257-323 37-99 (252)
180 3q87_B N6 adenine specific DNA 98.8 6.3E-09 2.1E-13 95.0 6.0 54 255-321 15-70 (170)
181 1xj5_A Spermidine synthase 1; 98.8 4.4E-08 1.5E-12 100.0 12.7 65 259-324 118-186 (334)
182 3uwp_A Histone-lysine N-methyl 98.8 3E-08 1E-12 104.3 11.4 69 254-323 166-243 (438)
183 2oxt_A Nucleoside-2'-O-methylt 98.8 3.3E-09 1.1E-13 104.9 3.9 35 258-296 71-105 (265)
184 2gb4_A Thiopurine S-methyltran 98.7 1E-08 3.6E-13 100.3 7.4 47 257-306 64-110 (252)
185 3cgg_A SAM-dependent methyltra 98.7 4.8E-08 1.6E-12 88.4 11.0 55 259-321 44-98 (195)
186 1y8c_A S-adenosylmethionine-de 98.7 2.2E-08 7.6E-13 94.3 9.0 58 261-322 37-94 (246)
187 2wa2_A Non-structural protein 98.7 5.3E-09 1.8E-13 104.1 4.8 35 258-296 79-113 (276)
188 3p2e_A 16S rRNA methylase; met 98.7 8.3E-09 2.8E-13 99.1 6.0 63 259-322 22-88 (225)
189 3e23_A Uncharacterized protein 98.7 3E-08 1E-12 92.3 9.5 46 258-306 40-85 (211)
190 2r6z_A UPF0341 protein in RSP 98.7 2.5E-08 8.4E-13 98.3 9.3 70 252-324 74-151 (258)
191 1iy9_A Spermidine synthase; ro 98.7 3.8E-08 1.3E-12 97.4 10.6 64 261-325 75-142 (275)
192 3bgv_A MRNA CAP guanine-N7 met 98.7 3.5E-08 1.2E-12 98.1 10.3 62 260-323 33-101 (313)
193 3dli_A Methyltransferase; PSI- 98.7 2.2E-08 7.6E-13 95.4 8.3 54 259-323 39-92 (240)
194 2o07_A Spermidine synthase; st 98.7 3.6E-08 1.2E-12 99.2 10.2 64 260-324 94-161 (304)
195 3ccf_A Cyclopropane-fatty-acyl 98.7 1.3E-08 4.3E-13 99.4 6.6 60 254-321 50-109 (279)
196 3i9f_A Putative type 11 methyl 98.7 3.1E-08 1E-12 89.0 8.6 57 256-320 12-68 (170)
197 2a14_A Indolethylamine N-methy 98.7 1.1E-08 3.9E-13 99.6 6.0 50 258-309 52-101 (263)
198 3m33_A Uncharacterized protein 98.7 1.3E-08 4.3E-13 96.7 5.9 55 259-321 46-100 (226)
199 3ldu_A Putative methylase; str 98.7 2.8E-07 9.6E-12 95.7 16.6 69 255-323 189-295 (385)
200 3l8d_A Methyltransferase; stru 98.7 1.6E-08 5.4E-13 95.7 6.5 56 260-321 52-107 (242)
201 3bwc_A Spermidine synthase; SA 98.7 6.9E-08 2.4E-12 96.8 11.5 64 260-324 94-161 (304)
202 2i7c_A Spermidine synthase; tr 98.7 7.3E-08 2.5E-12 95.7 11.4 64 260-324 77-144 (283)
203 3iv6_A Putative Zn-dependent a 98.7 7.2E-08 2.5E-12 95.4 11.1 54 252-308 36-89 (261)
204 2pt6_A Spermidine synthase; tr 98.7 4.1E-08 1.4E-12 99.5 9.5 64 260-324 115-182 (321)
205 2p7i_A Hypothetical protein; p 98.7 1.7E-08 5.7E-13 95.1 6.2 56 260-322 41-96 (250)
206 1q7h_A Conserved hypothetical 98.7 1.1E-08 3.8E-13 93.3 4.6 73 122-226 69-141 (153)
207 3k0b_A Predicted N6-adenine-sp 98.7 3.7E-07 1.3E-11 95.2 16.7 69 255-323 195-301 (393)
208 2i62_A Nicotinamide N-methyltr 98.7 1.6E-08 5.5E-13 96.8 5.7 50 258-309 53-102 (265)
209 1u2z_A Histone-lysine N-methyl 98.7 1.1E-07 3.7E-12 100.6 12.2 75 246-321 225-310 (433)
210 3h2b_A SAM-dependent methyltra 98.7 6.1E-08 2.1E-12 89.5 9.1 54 262-323 42-95 (203)
211 3r90_A Malignant T cell-amplif 98.7 9.7E-09 3.3E-13 97.2 3.6 74 122-226 91-167 (188)
212 3lkd_A Type I restriction-modi 98.6 6.5E-08 2.2E-12 105.0 10.4 84 240-323 196-287 (542)
213 3ege_A Putative methyltransfer 98.6 1.8E-08 6.2E-13 97.6 5.3 60 253-321 26-85 (261)
214 1uir_A Polyamine aminopropyltr 98.6 8.5E-08 2.9E-12 96.7 10.2 63 261-324 77-144 (314)
215 3htx_A HEN1; HEN1, small RNA m 98.6 8.6E-08 2.9E-12 107.9 10.9 70 254-323 714-789 (950)
216 3d79_A PUA domain, putative un 98.6 3.4E-08 1.2E-12 92.6 6.5 72 124-226 95-166 (179)
217 3b3j_A Histone-arginine methyl 98.6 7.4E-08 2.5E-12 103.0 9.8 64 256-322 153-217 (480)
218 3ldg_A Putative uncharacterize 98.6 3.9E-07 1.3E-11 94.8 15.0 69 255-323 188-294 (384)
219 2aot_A HMT, histamine N-methyl 98.6 4.2E-08 1.4E-12 96.8 6.8 58 259-316 50-113 (292)
220 3bzb_A Uncharacterized protein 98.6 1.8E-07 6E-12 92.4 11.2 61 258-320 76-147 (281)
221 3lcc_A Putative methyl chlorid 98.6 1.2E-07 4.2E-12 89.7 9.7 58 262-322 67-125 (235)
222 3ll7_A Putative methyltransfer 98.6 5.8E-08 2E-12 102.0 8.0 61 261-324 93-155 (410)
223 2b2c_A Spermidine synthase; be 98.6 5.8E-08 2E-12 98.3 7.5 63 261-324 108-174 (314)
224 3zv0_C H/ACA ribonucleoprotein 98.6 4.5E-08 1.5E-12 92.7 5.9 74 122-227 74-147 (195)
225 3fzg_A 16S rRNA methylase; met 98.6 1E-07 3.5E-12 90.8 8.2 56 260-316 48-104 (200)
226 2qfm_A Spermine synthase; sper 98.6 1.8E-07 6.1E-12 96.8 10.7 63 261-325 188-258 (364)
227 2gs9_A Hypothetical protein TT 98.6 9.8E-08 3.3E-12 88.7 8.0 51 261-321 36-86 (211)
228 3bxo_A N,N-dimethyltransferase 98.6 9.5E-08 3.3E-12 90.0 7.8 54 260-321 39-92 (239)
229 3gjy_A Spermidine synthase; AP 98.5 2.1E-07 7.2E-12 94.6 10.3 62 263-325 91-152 (317)
230 3khk_A Type I restriction-modi 98.5 7.3E-08 2.5E-12 104.6 6.8 73 239-312 223-309 (544)
231 2g72_A Phenylethanolamine N-me 98.5 5.7E-08 1.9E-12 95.4 5.5 47 260-308 70-116 (289)
232 2avn_A Ubiquinone/menaquinone 98.5 1.8E-07 6.2E-12 90.4 9.0 43 261-306 54-96 (260)
233 3e8s_A Putative SAM dependent 98.5 2.6E-07 9E-12 85.7 9.5 60 255-323 46-105 (227)
234 4hg2_A Methyltransferase type 98.5 4.4E-08 1.5E-12 96.3 4.4 52 261-321 39-90 (257)
235 3pfg_A N-methyltransferase; N, 98.5 2.4E-07 8.1E-12 89.3 9.5 55 260-322 49-103 (263)
236 1p91_A Ribosomal RNA large sub 98.5 1.1E-07 3.9E-12 91.8 7.0 56 260-321 84-139 (269)
237 3ggd_A SAM-dependent methyltra 98.5 3.2E-07 1.1E-11 87.3 9.7 60 258-323 53-112 (245)
238 2r3s_A Uncharacterized protein 98.5 1E-06 3.6E-11 87.8 13.7 67 255-323 157-226 (335)
239 1yub_A Ermam, rRNA methyltrans 98.5 1.9E-09 6.5E-14 104.3 -6.1 75 243-322 11-85 (245)
240 1qzz_A RDMB, aclacinomycin-10- 98.5 8.5E-07 2.9E-11 90.0 12.7 68 253-322 174-242 (374)
241 1tw3_A COMT, carminomycin 4-O- 98.4 1.8E-06 6.3E-11 87.2 13.8 67 254-322 176-243 (360)
242 1x19_A CRTF-related protein; m 98.4 1.8E-06 6.2E-11 87.6 13.5 69 253-323 182-251 (359)
243 3cc8_A Putative methyltransfer 98.4 2.4E-07 8.3E-12 86.1 6.4 45 256-304 28-72 (230)
244 2oyr_A UPF0341 protein YHIQ; a 98.4 6.4E-07 2.2E-11 88.5 9.3 70 252-324 77-157 (258)
245 4hc4_A Protein arginine N-meth 98.4 6E-07 2.1E-11 93.2 9.3 60 260-322 82-142 (376)
246 3i53_A O-methyltransferase; CO 98.4 3.2E-06 1.1E-10 84.7 14.2 64 257-322 165-229 (332)
247 3gwz_A MMCR; methyltransferase 98.4 6.3E-06 2.2E-10 84.3 16.6 67 254-322 195-262 (369)
248 3v97_A Ribosomal RNA large sub 98.4 3.1E-06 1.1E-10 94.4 14.9 69 255-323 184-294 (703)
249 3gru_A Dimethyladenosine trans 98.4 1.1E-06 3.7E-11 88.5 9.7 66 253-323 42-107 (295)
250 2ip2_A Probable phenazine-spec 98.3 3.9E-06 1.3E-10 83.9 13.6 63 256-321 163-226 (334)
251 2px2_A Genome polyprotein [con 98.3 3.7E-07 1.3E-11 90.1 5.9 36 259-294 71-109 (269)
252 3mcz_A O-methyltransferase; ad 98.3 1.7E-06 5.8E-11 87.2 10.5 67 255-323 172-240 (352)
253 2cx0_A Hypothetical protein AP 98.3 2.4E-07 8.2E-12 87.5 3.9 73 123-226 92-168 (187)
254 3sso_A Methyltransferase; macr 98.3 4.7E-07 1.6E-11 95.0 6.2 54 261-323 216-275 (419)
255 1qam_A ERMC' methyltransferase 98.3 3.3E-07 1.1E-11 88.9 4.7 67 252-323 21-87 (244)
256 3s1s_A Restriction endonucleas 98.3 1.4E-06 4.6E-11 98.1 9.9 43 260-302 320-364 (878)
257 3ufb_A Type I restriction-modi 98.3 8.3E-07 2.8E-11 96.0 7.8 83 239-321 195-289 (530)
258 3dp7_A SAM-dependent methyltra 98.3 6.9E-06 2.4E-10 83.8 13.8 61 260-322 178-239 (363)
259 3hp7_A Hemolysin, putative; st 98.3 1.9E-06 6.6E-11 86.6 8.9 39 261-301 85-123 (291)
260 1iq8_A Archaeosine tRNA-guanin 98.3 7.8E-07 2.7E-11 97.2 6.5 74 122-227 506-579 (582)
261 2cmg_A Spermidine synthase; tr 98.3 1.1E-06 3.7E-11 86.6 6.8 43 261-306 72-114 (262)
262 2qe6_A Uncharacterized protein 98.2 5.1E-06 1.7E-10 82.0 11.2 61 260-323 76-139 (274)
263 1vlm_A SAM-dependent methyltra 98.2 9.2E-07 3.2E-11 83.1 4.8 46 262-321 48-93 (219)
264 3opn_A Putative hemolysin; str 98.2 1.5E-06 5.1E-11 84.0 5.5 41 261-303 37-77 (232)
265 3frh_A 16S rRNA methylase; met 98.1 1.4E-05 4.7E-10 78.6 11.8 57 260-321 104-160 (253)
266 1af7_A Chemotaxis receptor met 98.1 2.8E-06 9.4E-11 84.5 6.5 45 261-305 105-156 (274)
267 2zfu_A Nucleomethylin, cerebra 98.1 1.1E-06 3.8E-11 81.9 3.3 40 252-297 58-97 (215)
268 4e2x_A TCAB9; kijanose, tetron 98.1 9.7E-07 3.3E-11 91.2 3.1 47 255-304 101-147 (416)
269 1wg8_A Predicted S-adenosylmet 98.1 6.6E-06 2.3E-10 82.3 8.5 65 253-324 14-78 (285)
270 3tqs_A Ribosomal RNA small sub 98.1 8.6E-06 2.9E-10 80.0 8.8 66 253-323 21-86 (255)
271 3tka_A Ribosomal RNA small sub 98.1 1E-05 3.5E-10 82.8 9.3 67 253-323 49-115 (347)
272 3cvo_A Methyltransferase-like 98.1 2E-05 7E-10 75.1 10.9 60 260-323 29-91 (202)
273 3eld_A Methyltransferase; flav 98.0 3.5E-06 1.2E-10 84.7 5.5 36 260-296 80-115 (300)
274 3lst_A CALO1 methyltransferase 98.0 5.7E-06 2E-10 83.7 7.0 43 253-296 176-218 (348)
275 3evf_A RNA-directed RNA polyme 98.0 4.1E-05 1.4E-09 76.3 11.7 37 259-296 72-108 (277)
276 3giw_A Protein of unknown func 98.0 1.8E-05 6.1E-10 79.0 8.8 62 262-323 79-142 (277)
277 3lcv_B Sisomicin-gentamicin re 98.0 1.8E-05 6.3E-10 78.6 8.8 58 262-321 133-190 (281)
278 2qy6_A UPF0209 protein YFCK; s 97.9 2.3E-05 7.7E-10 77.2 8.4 38 259-296 58-106 (257)
279 3gcz_A Polyprotein; flavivirus 97.9 5E-06 1.7E-10 83.0 3.4 38 259-297 88-125 (282)
280 3fut_A Dimethyladenosine trans 97.8 3E-05 1E-09 76.9 7.5 65 252-323 38-102 (271)
281 3uzu_A Ribosomal RNA small sub 97.8 3.9E-05 1.3E-09 76.3 8.4 68 253-324 34-102 (279)
282 2q07_A Uncharacterized protein 97.7 1.4E-05 4.7E-10 80.9 3.7 67 123-228 230-296 (306)
283 2ld4_A Anamorsin; methyltransf 97.7 4.4E-06 1.5E-10 75.6 -0.3 46 257-323 8-53 (176)
284 4a6d_A Hydroxyindole O-methylt 97.7 0.00035 1.2E-08 71.0 13.2 68 254-323 172-239 (353)
285 3reo_A (ISO)eugenol O-methyltr 97.7 0.00023 8E-09 72.7 11.8 55 259-321 201-255 (368)
286 4azs_A Methyltransferase WBDD; 97.6 0.00014 4.8E-09 78.9 10.3 61 261-324 66-126 (569)
287 3p9c_A Caffeic acid O-methyltr 97.6 0.00026 9E-09 72.3 11.8 58 256-321 195-253 (364)
288 2wk1_A NOVP; transferase, O-me 97.6 0.0002 6.8E-09 71.6 10.5 62 263-324 108-201 (282)
289 4auk_A Ribosomal RNA large sub 97.6 7.5E-05 2.6E-09 77.4 7.3 55 259-323 209-263 (375)
290 1fp1_D Isoliquiritigenin 2'-O- 97.6 6.6E-05 2.3E-09 76.6 6.4 55 259-321 207-261 (372)
291 1fp2_A Isoflavone O-methyltran 97.5 0.00015 5.1E-09 73.3 7.2 56 258-321 185-240 (352)
292 1qyr_A KSGA, high level kasuga 97.4 0.00011 3.8E-09 71.9 5.5 67 253-324 13-79 (252)
293 3ftd_A Dimethyladenosine trans 97.4 8.8E-05 3E-09 72.4 4.7 66 253-324 23-88 (249)
294 3p8z_A Mtase, non-structural p 97.4 0.00014 4.9E-09 71.0 5.8 39 258-297 75-113 (267)
295 2p38_A Protein involved in rib 97.2 0.00051 1.7E-08 63.6 6.6 54 123-210 95-148 (166)
296 2oo3_A Protein involved in cat 97.1 0.00017 5.9E-09 72.1 2.7 60 262-326 92-151 (283)
297 1zg3_A Isoflavanone 4'-O-methy 97.1 0.00077 2.6E-08 68.2 7.2 55 259-321 191-245 (358)
298 3r24_A NSP16, 2'-O-methyl tran 97.0 0.0011 3.7E-08 66.8 7.6 37 257-296 105-148 (344)
299 3lkz_A Non-structural protein 97.0 0.0018 6.3E-08 65.0 8.6 39 258-297 91-129 (321)
300 3u28_A H/ACA ribonucleoprotein 97.0 0.00069 2.3E-08 70.6 5.7 74 122-227 265-338 (400)
301 3o4f_A Spermidine synthase; am 96.9 0.0029 1E-07 63.5 9.9 69 254-324 77-150 (294)
302 3c6k_A Spermine synthase; sper 96.9 0.0026 8.9E-08 66.1 9.3 63 261-325 205-275 (381)
303 3ua3_A Protein arginine N-meth 96.7 0.0017 5.8E-08 72.2 6.8 62 262-324 410-484 (745)
304 4gqb_A Protein arginine N-meth 96.6 0.0016 5.5E-08 71.8 5.7 60 263-323 359-422 (637)
305 3g7u_A Cytosine-specific methy 96.3 0.013 4.6E-07 60.4 10.0 54 263-323 3-56 (376)
306 2j5v_A Glutamate 5-kinase; pro 96.2 0.0041 1.4E-07 64.2 5.7 63 122-216 274-337 (367)
307 1g55_A DNA cytosine methyltran 96.1 0.012 4.2E-07 59.8 8.3 45 263-307 3-47 (343)
308 1pl8_A Human sorbitol dehydrog 96.0 0.048 1.7E-06 54.9 11.9 54 255-313 165-219 (356)
309 2zig_A TTHA0409, putative modi 95.7 0.026 9E-07 55.8 8.4 60 248-310 220-281 (297)
310 2zig_A TTHA0409, putative modi 95.7 0.017 6E-07 57.1 7.1 62 422-483 37-98 (297)
311 2c7p_A Modification methylase 95.6 0.025 8.6E-07 57.2 7.9 44 262-307 11-54 (327)
312 3s2e_A Zinc-containing alcohol 95.5 0.044 1.5E-06 54.7 9.4 53 255-313 160-213 (340)
313 2py6_A Methyltransferase FKBM; 95.4 0.038 1.3E-06 57.4 8.8 64 257-320 222-290 (409)
314 3jv7_A ADH-A; dehydrogenase, n 95.4 0.044 1.5E-06 54.8 9.0 52 258-314 168-220 (345)
315 2dph_A Formaldehyde dismutase; 95.3 0.023 7.9E-07 58.3 6.6 53 255-312 179-232 (398)
316 1sqw_A Saccharomyces cerevisia 95.3 0.024 8.2E-07 53.4 6.0 71 122-224 93-164 (188)
317 4eez_A Alcohol dehydrogenase 1 95.1 0.082 2.8E-06 52.6 9.8 54 255-313 157-211 (348)
318 1e3j_A NADP(H)-dependent ketos 95.0 0.1 3.6E-06 52.3 10.5 52 255-312 162-214 (352)
319 4ej6_A Putative zinc-binding d 95.0 0.045 1.5E-06 55.6 7.8 54 255-313 176-230 (370)
320 3m6i_A L-arabinitol 4-dehydrog 94.9 0.23 8E-06 49.8 12.7 50 255-305 173-223 (363)
321 3fpc_A NADP-dependent alcohol 94.9 0.043 1.5E-06 55.1 7.1 54 255-313 160-214 (352)
322 3b5i_A S-adenosyl-L-methionine 94.8 0.3 1E-05 50.4 13.4 45 262-321 53-99 (374)
323 1kol_A Formaldehyde dehydrogen 94.8 0.056 1.9E-06 55.2 7.9 52 256-312 180-232 (398)
324 4a2c_A Galactitol-1-phosphate 94.7 0.13 4.3E-06 51.2 10.2 55 254-313 153-208 (346)
325 2aus_C Pseudouridine synthase; 94.7 0.037 1.3E-06 56.4 6.2 71 122-224 249-319 (334)
326 1f8f_A Benzyl alcohol dehydrog 94.7 0.13 4.3E-06 52.0 10.0 53 256-313 185-238 (371)
327 1p0f_A NADP-dependent alcohol 94.6 0.16 5.4E-06 51.4 10.7 53 256-313 186-239 (373)
328 1cdo_A Alcohol dehydrogenase; 94.5 0.13 4.5E-06 52.0 9.8 52 256-312 187-239 (374)
329 1e3i_A Alcohol dehydrogenase, 94.5 0.17 5.8E-06 51.2 10.6 52 256-312 190-242 (376)
330 2jhf_A Alcohol dehydrogenase E 94.5 0.18 6E-06 51.0 10.6 52 256-312 186-238 (374)
331 2fzw_A Alcohol dehydrogenase c 94.5 0.19 6.5E-06 50.7 10.8 53 256-313 185-238 (373)
332 2qrv_A DNA (cytosine-5)-methyl 94.4 0.18 6.2E-06 50.3 10.3 58 260-323 14-72 (295)
333 1vj0_A Alcohol dehydrogenase, 94.3 0.11 3.7E-06 53.0 8.7 51 256-313 189-243 (380)
334 2apo_A Probable tRNA pseudouri 94.2 0.054 1.8E-06 55.7 6.1 71 122-224 268-338 (357)
335 3uko_A Alcohol dehydrogenase c 94.2 0.13 4.3E-06 52.2 8.8 54 255-313 187-241 (378)
336 1g60_A Adenine-specific methyl 94.2 0.064 2.2E-06 52.0 6.3 61 248-311 197-259 (260)
337 3uog_A Alcohol dehydrogenase; 94.0 0.12 4E-06 52.2 8.2 52 256-313 184-236 (363)
338 1i4w_A Mitochondrial replicati 94.0 0.08 2.7E-06 54.4 6.8 60 261-324 58-117 (353)
339 3two_A Mannitol dehydrogenase; 93.8 0.21 7.3E-06 49.9 9.4 52 256-313 171-223 (348)
340 1wma_A Carbonyl reductase [NAD 93.5 0.44 1.5E-05 44.8 10.7 61 261-323 3-65 (276)
341 4dvj_A Putative zinc-dependent 93.5 0.24 8.1E-06 50.1 9.4 53 256-313 161-220 (363)
342 4fs3_A Enoyl-[acyl-carrier-pro 93.4 0.61 2.1E-05 44.7 11.6 62 262-323 6-69 (256)
343 4h0n_A DNMT2; SAH binding, tra 93.4 0.27 9.2E-06 49.8 9.5 42 264-306 5-47 (333)
344 3oig_A Enoyl-[acyl-carrier-pro 92.8 0.76 2.6E-05 43.6 11.3 62 262-323 7-70 (266)
345 4eye_A Probable oxidoreductase 92.8 0.3 1E-05 48.8 8.8 53 255-313 153-207 (342)
346 3qv2_A 5-cytosine DNA methyltr 92.5 0.21 7.1E-06 50.6 7.2 44 262-306 10-55 (327)
347 1boo_A Protein (N-4 cytosine-s 92.4 0.15 5E-06 51.2 5.8 57 422-484 30-86 (323)
348 2k4m_A TR8_protein, UPF0146 pr 92.3 0.12 4E-06 47.1 4.4 49 247-300 24-73 (153)
349 1g60_A Adenine-specific methyl 92.2 0.14 4.9E-06 49.4 5.3 56 423-484 21-76 (260)
350 3fbg_A Putative arginate lyase 92.2 0.37 1.3E-05 48.1 8.5 46 261-313 150-198 (346)
351 3ip1_A Alcohol dehydrogenase, 92.0 0.6 2E-05 47.8 10.0 48 258-312 210-260 (404)
352 3jyn_A Quinone oxidoreductase; 91.9 0.38 1.3E-05 47.5 8.1 50 256-312 135-187 (325)
353 3grk_A Enoyl-(acyl-carrier-pro 91.7 2.4 8.3E-05 41.2 13.6 61 261-323 30-92 (293)
354 2d8a_A PH0655, probable L-thre 91.7 0.37 1.3E-05 48.1 7.8 50 256-312 163-214 (348)
355 3qwb_A Probable quinone oxidor 91.2 0.47 1.6E-05 47.0 7.9 49 257-312 144-195 (334)
356 1ja9_A 4HNR, 1,3,6,8-tetrahydr 91.0 1.1 3.9E-05 42.2 10.1 61 261-323 20-82 (274)
357 3gms_A Putative NADPH:quinone 90.4 0.47 1.6E-05 47.2 7.1 52 255-312 138-191 (340)
358 1eg2_A Modification methylase 90.3 0.21 7.3E-06 50.2 4.5 51 423-482 56-106 (319)
359 3pxx_A Carveol dehydrogenase; 90.2 3.3 0.00011 39.4 12.7 60 262-323 10-82 (287)
360 1yb1_A 17-beta-hydroxysteroid 90.0 3.8 0.00013 39.0 13.0 60 262-323 31-91 (272)
361 3i1j_A Oxidoreductase, short c 89.9 2.9 9.7E-05 38.9 11.7 60 261-321 13-73 (247)
362 3k31_A Enoyl-(acyl-carrier-pro 89.8 2.7 9.3E-05 40.8 12.0 61 261-323 29-91 (296)
363 2b5w_A Glucose dehydrogenase; 89.8 0.68 2.3E-05 46.4 7.7 51 256-312 161-224 (357)
364 3gaz_A Alcohol dehydrogenase s 89.3 0.83 2.8E-05 45.5 7.9 50 256-312 145-196 (343)
365 3vyw_A MNMC2; tRNA wobble urid 89.1 1.3 4.3E-05 44.7 9.0 44 424-484 185-228 (308)
366 3o38_A Short chain dehydrogena 89.1 2.8 9.5E-05 39.6 11.1 61 262-323 22-84 (266)
367 3rkr_A Short chain oxidoreduct 88.9 4.5 0.00015 38.3 12.5 61 261-323 28-89 (262)
368 2efj_A 3,7-dimethylxanthine me 88.8 1.8 6.2E-05 44.8 10.2 30 457-486 200-229 (384)
369 4b7c_A Probable oxidoreductase 88.8 0.85 2.9E-05 45.1 7.5 54 255-312 143-197 (336)
370 3krt_A Crotonyl COA reductase; 88.7 0.69 2.4E-05 48.1 7.1 51 257-313 224-276 (456)
371 3ek2_A Enoyl-(acyl-carrier-pro 88.6 2.2 7.5E-05 40.1 10.1 62 260-323 12-75 (271)
372 4a0s_A Octenoyl-COA reductase/ 88.1 1.6 5.5E-05 45.1 9.4 52 257-313 216-268 (447)
373 3ubt_Y Modification methylase 88.0 1.3 4.5E-05 43.6 8.3 41 263-305 1-41 (331)
374 4eso_A Putative oxidoreductase 87.8 2.3 7.9E-05 40.3 9.6 58 261-323 7-65 (255)
375 3tjr_A Short chain dehydrogena 87.7 3.4 0.00012 40.2 11.0 61 261-323 30-91 (301)
376 1m6e_X S-adenosyl-L-methionnin 87.6 0.66 2.2E-05 47.6 5.9 25 461-485 188-212 (359)
377 3lyl_A 3-oxoacyl-(acyl-carrier 87.5 7.5 0.00026 36.1 12.9 60 262-323 5-65 (247)
378 1fmc_A 7 alpha-hydroxysteroid 87.4 6.3 0.00022 36.5 12.3 60 262-323 11-71 (255)
379 1gu7_A Enoyl-[acyl-carrier-pro 87.1 2 6.8E-05 42.9 9.1 55 257-313 162-219 (364)
380 3ucx_A Short chain dehydrogena 86.9 4.9 0.00017 38.1 11.4 61 261-323 10-71 (264)
381 2c0c_A Zinc binding alcohol de 86.8 2.4 8.2E-05 42.5 9.5 51 256-312 158-210 (362)
382 3ioy_A Short-chain dehydrogena 86.3 5.4 0.00019 39.2 11.7 61 262-323 8-70 (319)
383 3lf2_A Short chain oxidoreduct 86.2 7.2 0.00024 37.0 12.2 61 262-323 8-70 (265)
384 3rih_A Short chain dehydrogena 86.2 2.3 8E-05 41.5 8.8 61 262-323 41-102 (293)
385 3ksu_A 3-oxoacyl-acyl carrier 86.2 5.4 0.00019 37.9 11.3 61 262-323 11-74 (262)
386 3tos_A CALS11; methyltransfera 86.0 2.2 7.4E-05 41.8 8.4 32 261-293 70-107 (257)
387 1gee_A Glucose 1-dehydrogenase 85.8 5.6 0.00019 37.1 11.1 60 262-323 7-68 (261)
388 3tqh_A Quinone oxidoreductase; 85.4 2.4 8.1E-05 41.7 8.5 52 255-313 146-199 (321)
389 3me5_A Cytosine-specific methy 85.3 2.4 8.2E-05 45.1 9.0 59 262-324 88-146 (482)
390 3pgx_A Carveol dehydrogenase; 85.2 5.5 0.00019 38.0 10.9 61 261-323 14-88 (280)
391 3awd_A GOX2181, putative polyo 85.1 5.9 0.0002 36.8 10.8 60 262-323 13-73 (260)
392 3pk0_A Short-chain dehydrogena 85.0 7 0.00024 37.0 11.4 61 262-323 10-71 (262)
393 1edo_A Beta-keto acyl carrier 84.9 9 0.00031 35.2 11.9 59 263-323 2-62 (244)
394 1boo_A Protein (N-4 cytosine-s 84.9 0.71 2.4E-05 46.2 4.5 50 259-311 250-299 (323)
395 2ae2_A Protein (tropinone redu 84.6 10 0.00036 35.6 12.4 60 262-323 9-69 (260)
396 1w6u_A 2,4-dienoyl-COA reducta 84.5 6.5 0.00022 37.6 11.1 60 262-323 26-87 (302)
397 3r1i_A Short-chain type dehydr 84.4 4.7 0.00016 38.8 10.0 60 262-323 32-92 (276)
398 1eg2_A Modification methylase 84.3 0.89 3.1E-05 45.6 4.9 60 248-310 227-291 (319)
399 4dry_A 3-oxoacyl-[acyl-carrier 84.3 4.5 0.00015 39.0 9.8 61 262-323 33-94 (281)
400 2a4k_A 3-oxoacyl-[acyl carrier 84.2 5.3 0.00018 38.0 10.2 57 262-323 6-63 (263)
401 2p91_A Enoyl-[acyl-carrier-pro 84.1 11 0.00036 36.1 12.4 61 261-323 20-82 (285)
402 2pd6_A Estradiol 17-beta-dehyd 84.1 3.3 0.00011 38.7 8.6 60 262-322 7-73 (264)
403 2pd4_A Enoyl-[acyl-carrier-pro 83.9 6.1 0.00021 37.6 10.5 60 262-323 6-67 (275)
404 2pnf_A 3-oxoacyl-[acyl-carrier 83.7 8.5 0.00029 35.4 11.1 60 262-323 7-68 (248)
405 3h7a_A Short chain dehydrogena 83.6 7.5 0.00026 36.7 10.9 60 262-323 7-67 (252)
406 3is3_A 17BETA-hydroxysteroid d 83.5 12 0.00042 35.4 12.5 60 262-323 18-79 (270)
407 2jah_A Clavulanic acid dehydro 83.5 5.5 0.00019 37.3 9.8 60 262-323 7-67 (247)
408 1yxm_A Pecra, peroxisomal tran 83.4 8.2 0.00028 37.0 11.2 61 262-323 18-83 (303)
409 2bd0_A Sepiapterin reductase; 83.4 7.2 0.00025 36.0 10.5 59 263-323 3-69 (244)
410 2c07_A 3-oxoacyl-(acyl-carrier 83.4 13 0.00045 35.4 12.7 60 262-323 44-104 (285)
411 3f9i_A 3-oxoacyl-[acyl-carrier 83.3 12 0.0004 34.8 12.0 58 260-322 12-70 (249)
412 3f1l_A Uncharacterized oxidore 83.2 10 0.00036 35.5 11.7 59 262-321 12-71 (252)
413 3oid_A Enoyl-[acyl-carrier-pro 82.9 8.5 0.00029 36.4 11.0 60 262-323 4-65 (258)
414 3svt_A Short-chain type dehydr 82.9 9.6 0.00033 36.3 11.4 61 262-323 11-74 (281)
415 2uvd_A 3-oxoacyl-(acyl-carrier 82.8 10 0.00035 35.3 11.4 60 262-323 4-65 (246)
416 3pi7_A NADH oxidoreductase; gr 82.7 1.1 3.7E-05 44.7 4.7 50 260-313 162-212 (349)
417 4e6p_A Probable sorbitol dehyd 82.6 8.9 0.0003 36.1 11.0 57 262-323 8-65 (259)
418 3s55_A Putative short-chain de 82.3 12 0.0004 35.6 11.8 60 262-323 10-82 (281)
419 3pvc_A TRNA 5-methylaminomethy 82.3 1.9 6.5E-05 47.3 6.9 44 260-303 57-111 (689)
420 1geg_A Acetoin reductase; SDR 82.3 10 0.00034 35.6 11.2 59 263-323 3-62 (256)
421 3ijr_A Oxidoreductase, short c 82.2 15 0.00052 35.3 12.7 60 262-323 47-108 (291)
422 3ftp_A 3-oxoacyl-[acyl-carrier 82.1 11 0.00039 35.9 11.6 60 262-323 28-88 (270)
423 3nyw_A Putative oxidoreductase 82.0 8.6 0.00029 36.2 10.6 61 262-323 7-70 (250)
424 3ai3_A NADPH-sorbose reductase 81.9 10 0.00034 35.7 11.0 60 262-323 7-68 (263)
425 1xhl_A Short-chain dehydrogena 81.7 12 0.0004 36.3 11.7 61 262-323 26-89 (297)
426 2ph3_A 3-oxoacyl-[acyl carrier 81.5 15 0.00052 33.6 11.9 59 264-323 3-63 (245)
427 3rku_A Oxidoreductase YMR226C; 81.4 19 0.00066 34.7 13.1 61 262-323 33-98 (287)
428 3tfo_A Putative 3-oxoacyl-(acy 81.4 10 0.00035 36.2 11.1 60 262-323 4-64 (264)
429 3r3s_A Oxidoreductase; structu 81.2 11 0.00038 36.4 11.3 60 262-323 49-111 (294)
430 1zem_A Xylitol dehydrogenase; 81.2 7.9 0.00027 36.5 10.1 60 262-323 7-67 (262)
431 3gaf_A 7-alpha-hydroxysteroid 81.1 8.1 0.00028 36.4 10.1 60 262-323 12-72 (256)
432 4egf_A L-xylulose reductase; s 81.1 7 0.00024 37.1 9.6 60 262-323 20-81 (266)
433 3sju_A Keto reductase; short-c 80.9 5.9 0.0002 38.0 9.1 60 262-323 24-84 (279)
434 3v2g_A 3-oxoacyl-[acyl-carrier 80.9 16 0.00056 34.8 12.3 60 262-323 31-92 (271)
435 3imf_A Short chain dehydrogena 80.9 11 0.00036 35.6 10.8 60 262-323 6-66 (257)
436 2wyu_A Enoyl-[acyl carrier pro 80.8 5.9 0.0002 37.4 9.0 60 262-323 8-69 (261)
437 1qsg_A Enoyl-[acyl-carrier-pro 80.7 9.6 0.00033 35.9 10.5 61 261-323 8-70 (265)
438 3l77_A Short-chain alcohol deh 80.5 9.3 0.00032 35.1 10.1 60 262-323 2-63 (235)
439 1zsy_A Mitochondrial 2-enoyl t 80.3 6.1 0.00021 39.4 9.3 56 256-313 162-219 (357)
440 1uuf_A YAHK, zinc-type alcohol 80.3 2.5 8.7E-05 42.6 6.5 51 257-313 190-241 (369)
441 4fc7_A Peroxisomal 2,4-dienoyl 80.1 13 0.00045 35.4 11.3 60 262-323 27-88 (277)
442 3afn_B Carbonyl reductase; alp 80.1 7.3 0.00025 36.0 9.2 60 262-323 7-68 (258)
443 1y1p_A ARII, aldehyde reductas 79.8 25 0.00087 33.5 13.4 60 261-321 10-71 (342)
444 1xq1_A Putative tropinone redu 79.8 16 0.00053 34.2 11.5 60 262-323 14-74 (266)
445 2zat_A Dehydrogenase/reductase 79.5 18 0.0006 33.9 11.9 60 262-323 14-74 (260)
446 1xkq_A Short-chain reductase f 79.4 11 0.00039 35.8 10.6 61 262-323 6-69 (280)
447 2wsb_A Galactitol dehydrogenas 78.9 11 0.00039 34.7 10.2 58 262-323 11-69 (254)
448 2b4q_A Rhamnolipids biosynthes 78.9 8.7 0.0003 36.8 9.6 59 262-323 29-88 (276)
449 4imr_A 3-oxoacyl-(acyl-carrier 78.7 11 0.00039 36.0 10.4 60 262-323 33-93 (275)
450 4a27_A Synaptic vesicle membra 78.7 4.7 0.00016 40.1 7.8 51 256-313 137-189 (349)
451 1g0o_A Trihydroxynaphthalene r 78.7 22 0.00075 33.8 12.4 60 262-323 29-90 (283)
452 1uls_A Putative 3-oxoacyl-acyl 78.0 13 0.00044 34.7 10.3 55 262-323 5-60 (245)
453 1cyd_A Carbonyl reductase; sho 78.0 30 0.001 31.6 12.8 56 261-322 6-62 (244)
454 3e9n_A Putative short-chain de 78.0 31 0.0011 31.8 12.9 56 262-324 5-60 (245)
455 2ehd_A Oxidoreductase, oxidore 77.9 11 0.00037 34.5 9.6 56 262-323 5-61 (234)
456 1zk4_A R-specific alcohol dehy 77.4 14 0.00047 34.1 10.3 59 262-323 6-65 (251)
457 2h7i_A Enoyl-[acyl-carrier-pro 77.4 6.9 0.00024 37.1 8.3 60 261-323 6-67 (269)
458 3guy_A Short-chain dehydrogena 77.2 18 0.00063 33.1 11.0 51 268-322 6-57 (230)
459 1xg5_A ARPG836; short chain de 77.1 17 0.00057 34.5 10.9 61 262-323 32-94 (279)
460 4ibo_A Gluconate dehydrogenase 77.0 13 0.00046 35.4 10.3 60 262-323 26-86 (271)
461 2rhc_B Actinorhodin polyketide 77.0 19 0.00067 34.2 11.4 60 262-323 22-82 (277)
462 3cxt_A Dehydrogenase with diff 76.8 20 0.00067 34.7 11.5 60 262-323 34-94 (291)
463 1pqw_A Polyketide synthase; ro 76.7 2.1 7.3E-05 38.6 4.2 52 256-312 33-85 (198)
464 2hq1_A Glucose/ribitol dehydro 76.6 13 0.00044 34.2 9.7 60 262-323 5-66 (247)
465 3sx2_A Putative 3-ketoacyl-(ac 76.4 12 0.00042 35.3 9.8 61 261-323 12-85 (278)
466 3gk3_A Acetoacetyl-COA reducta 76.1 22 0.00077 33.5 11.5 60 262-323 25-86 (269)
467 1x1t_A D(-)-3-hydroxybutyrate 76.0 17 0.00059 34.0 10.6 60 262-323 4-66 (260)
468 3oec_A Carveol dehydrogenase ( 75.9 22 0.00076 34.7 11.8 60 262-323 46-118 (317)
469 1yo6_A Putative carbonyl reduc 75.7 11 0.00038 34.4 9.0 57 262-323 3-62 (250)
470 1vl8_A Gluconate 5-dehydrogena 75.6 26 0.00089 33.1 11.9 61 261-323 20-82 (267)
471 2qhx_A Pteridine reductase 1; 75.5 25 0.00086 34.6 12.1 60 262-323 46-108 (328)
472 4iin_A 3-ketoacyl-acyl carrier 75.4 15 0.00052 34.7 10.1 60 262-323 29-90 (271)
473 3tsc_A Putative oxidoreductase 75.4 18 0.0006 34.4 10.6 60 262-323 11-84 (277)
474 3l6e_A Oxidoreductase, short-c 75.4 17 0.00057 33.8 10.2 56 263-323 4-60 (235)
475 1xu9_A Corticosteroid 11-beta- 75.4 5.5 0.00019 38.1 7.0 61 262-323 28-89 (286)
476 3osu_A 3-oxoacyl-[acyl-carrier 75.0 23 0.00078 32.9 11.2 60 262-323 4-65 (246)
477 3qiv_A Short-chain dehydrogena 74.7 21 0.00073 33.0 10.8 60 262-323 9-69 (253)
478 4g81_D Putative hexonate dehyd 74.7 23 0.0008 34.1 11.3 60 262-323 9-69 (255)
479 3gqv_A Enoyl reductase; medium 74.6 12 0.00039 37.6 9.5 47 260-313 163-211 (371)
480 3v8b_A Putative dehydrogenase, 74.6 17 0.00057 34.9 10.3 61 261-323 27-88 (283)
481 3t7c_A Carveol dehydrogenase; 74.5 26 0.00088 33.7 11.7 60 262-323 28-100 (299)
482 3gvc_A Oxidoreductase, probabl 74.5 24 0.0008 33.8 11.3 57 262-323 29-86 (277)
483 3u5t_A 3-oxoacyl-[acyl-carrier 74.2 14 0.00049 35.1 9.6 60 262-323 27-88 (267)
484 3op4_A 3-oxoacyl-[acyl-carrier 73.8 20 0.00067 33.5 10.4 57 262-323 9-66 (248)
485 2bgk_A Rhizome secoisolaricire 73.7 17 0.00058 34.0 10.0 58 262-323 16-75 (278)
486 3t4x_A Oxidoreductase, short c 73.7 60 0.002 30.4 14.1 60 262-322 10-71 (267)
487 1h5q_A NADP-dependent mannitol 73.2 11 0.00036 35.1 8.3 60 262-323 14-75 (265)
488 1piw_A Hypothetical zinc-type 73.2 3.4 0.00012 41.2 5.1 51 257-313 175-226 (360)
489 3n74_A 3-ketoacyl-(acyl-carrie 73.1 23 0.0008 32.9 10.7 57 262-323 9-66 (261)
490 1ae1_A Tropinone reductase-I; 73.0 26 0.0009 33.1 11.2 60 262-323 21-81 (273)
491 3v2h_A D-beta-hydroxybutyrate 73.0 15 0.00052 35.1 9.5 61 262-323 25-87 (281)
492 3ps9_A TRNA 5-methylaminomethy 72.8 11 0.00039 40.8 9.5 41 260-300 65-119 (676)
493 4dmm_A 3-oxoacyl-[acyl-carrier 72.7 32 0.0011 32.6 11.7 60 262-323 28-89 (269)
494 2cfc_A 2-(R)-hydroxypropyl-COM 72.6 19 0.00066 33.1 9.9 60 262-323 2-63 (250)
495 3uve_A Carveol dehydrogenase ( 72.4 19 0.00065 34.2 10.0 60 262-323 11-87 (286)
496 3e8x_A Putative NAD-dependent 72.2 22 0.00075 32.5 10.1 54 261-322 20-75 (236)
497 1nff_A Putative oxidoreductase 72.1 14 0.0005 34.7 9.0 57 262-323 7-64 (260)
498 1rjw_A ADH-HT, alcohol dehydro 72.1 4 0.00014 40.3 5.3 50 257-312 160-210 (339)
499 4dqx_A Probable oxidoreductase 72.0 28 0.00095 33.2 11.2 57 262-323 27-84 (277)
500 3sc4_A Short chain dehydrogena 71.8 34 0.0012 32.6 11.8 60 262-323 9-76 (285)
No 1
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=1.7e-44 Score=373.42 Aligned_cols=170 Identities=27% Similarity=0.412 Sum_probs=144.2
Q ss_pred cccCCccc--cccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHH
Q 011036 230 FQLPSFYD--VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAA 307 (495)
Q Consensus 230 ~~lp~~~~--~~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~ 307 (495)
..+|+|.. +.-+.|++||.+||+++++|+|+||++||||||||||||+|||++|. .|.|+|+|+|.+|+..++++++
T Consensus 115 ~~~p~~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~ 193 (359)
T 4fzv_A 115 SRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILH 193 (359)
T ss_dssp CCCCCCCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHH
T ss_pred hcCCCcccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHH
Confidence 34455432 23567999999999999999999999999999999999999999774 5899999999999999999999
Q ss_pred HhCCC------ceEEEEcchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCccccccccc
Q 011036 308 EMGLK------CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNE 381 (495)
Q Consensus 308 ~~gl~------~i~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (495)
++|.. ++.+...|+.+.-
T Consensus 194 r~~~~~~~~~~~v~v~~~D~~~~~-------------------------------------------------------- 217 (359)
T 4fzv_A 194 SYVPEEIRDGNQVRVTSWDGRKWG-------------------------------------------------------- 217 (359)
T ss_dssp HHSCTTTTTSSSEEEECCCGGGHH--------------------------------------------------------
T ss_pred HhhhhhhccCCceEEEeCchhhcc--------------------------------------------------------
Confidence 99874 4666666664421
Q ss_pred ccccccccchhhhhhhhhhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCC--CC---cccchhhhhcHHHHHH
Q 011036 382 KGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSAL--GL---RPRLFAAEETIQSLRN 456 (495)
Q Consensus 382 ~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSgl--G~---rp~l~~~~~t~~~l~~ 456 (495)
.+.+++||+||+||||||+ |+ .|++++ .++.+++..
T Consensus 218 --------------------------------------~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~-~~~~~~~~~ 258 (359)
T 4fzv_A 218 --------------------------------------ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFK-RSRKKERQI 258 (359)
T ss_dssp --------------------------------------HHSTTCEEEEEEECCCCCHHHHTTCCTTCTTS-GGGHHHHHT
T ss_pred --------------------------------------hhccccCCEEEECCccCCCCCcccccChhhhh-hCCHHHHHH
Confidence 1124689999999999997 44 255666 778999999
Q ss_pred hHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccccC
Q 011036 457 HGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENEALCA 495 (495)
Q Consensus 457 ~a~~Qrrll~~A~~lLkpGG~LVYSTCTi~p~ENE~vV~ 495 (495)
++.+|++||.+|+++|||||+|||||||++|+|||+||+
T Consensus 259 l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~ 297 (359)
T 4fzv_A 259 LPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQ 297 (359)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHH
Confidence 999999999999999999999999999999999999984
No 2
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=1.3e-40 Score=354.28 Aligned_cols=162 Identities=28% Similarity=0.488 Sum_probs=147.6
Q ss_pred ccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEE
Q 011036 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (495)
Q Consensus 239 ~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~ 318 (495)
.+|.+++|+.+|++++.+|++++|++|||||||||+||++||++|+++|+|+|+|+|+.++..++++++++|+++|.++.
T Consensus 83 ~~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~ 162 (456)
T 3m4x_A 83 QAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTN 162 (456)
T ss_dssp HTTSCEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEEC
T ss_pred hCCcEEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEe
Confidence 58999999999999999999999999999999999999999999998999999999999999999999999999999999
Q ss_pred cchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhh
Q 011036 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNM 398 (495)
Q Consensus 319 ~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 398 (495)
.|+.+...
T Consensus 163 ~Da~~l~~------------------------------------------------------------------------ 170 (456)
T 3m4x_A 163 HAPAELVP------------------------------------------------------------------------ 170 (456)
T ss_dssp CCHHHHHH------------------------------------------------------------------------
T ss_pred CCHHHhhh------------------------------------------------------------------------
Confidence 99866310
Q ss_pred hhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCCCCc---ccchhhhhcHHHHHHhHHHHHHHHHHHHhcCCCC
Q 011036 399 RRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLR---PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPG 475 (495)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~r---p~l~~~~~t~~~l~~~a~~Qrrll~~A~~lLkpG 475 (495)
+.+++||+||+||||||+|+. |+..+ .++.+++..++.+|+++|+.|.++||||
T Consensus 171 ----------------------~~~~~FD~Il~DaPCSg~G~~rr~p~~~~-~~~~~~~~~l~~~Q~~iL~~a~~~LkpG 227 (456)
T 3m4x_A 171 ----------------------HFSGFFDRIVVDAPCSGEGMFRKDPNAIK-EWTEESPLYCQKRQQEILSSAIKMLKNK 227 (456)
T ss_dssp ----------------------HHTTCEEEEEEECCCCCGGGTTTCHHHHH-HCCTTHHHHHHHHHHHHHHHHHHTEEEE
T ss_pred ----------------------hccccCCEEEECCCCCCccccccCHHHhh-hcCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 013579999999999999983 55554 5678899999999999999999999999
Q ss_pred CEEEEEeCCCCCcCcccccC
Q 011036 476 GIIVYSTCTINPGENEALCA 495 (495)
Q Consensus 476 G~LVYSTCTi~p~ENE~vV~ 495 (495)
|+|||||||++++|||++|+
T Consensus 228 G~LvYsTCs~~~eEne~vv~ 247 (456)
T 3m4x_A 228 GQLIYSTCTFAPEENEEIIS 247 (456)
T ss_dssp EEEEEEESCCCGGGTHHHHH
T ss_pred cEEEEEEeecccccCHHHHH
Confidence 99999999999999999873
No 3
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=1.4e-40 Score=356.09 Aligned_cols=161 Identities=35% Similarity=0.581 Sum_probs=146.1
Q ss_pred ccccEEEccccHHHHHhhcCCC--CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEE
Q 011036 239 LEGEIFLQNLPSIVTAHALDPQ--KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316 (495)
Q Consensus 239 ~~G~i~lQ~l~S~v~~~~Ldpq--pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~ 316 (495)
.+|.+++|+.+|++++++|+++ +|++|||||||||+||++||++|+++|.|+|+|+|+.++..++++++++|+++|.+
T Consensus 93 ~~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~ 172 (479)
T 2frx_A 93 LSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVAL 172 (479)
T ss_dssp HTTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEE
T ss_pred hCcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEE
Confidence 5899999999999999999999 99999999999999999999999888999999999999999999999999999999
Q ss_pred EEcchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhh
Q 011036 317 YKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRK 396 (495)
Q Consensus 317 ~~~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 396 (495)
+..|+....
T Consensus 173 ~~~D~~~~~----------------------------------------------------------------------- 181 (479)
T 2frx_A 173 THFDGRVFG----------------------------------------------------------------------- 181 (479)
T ss_dssp ECCCSTTHH-----------------------------------------------------------------------
T ss_pred EeCCHHHhh-----------------------------------------------------------------------
Confidence 988875421
Q ss_pred hhhhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCCCCc---ccchhhhhcHHHHHHhHHHHHHHHHHHHhcCC
Q 011036 397 NMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLR---PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVR 473 (495)
Q Consensus 397 ~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~r---p~l~~~~~t~~~l~~~a~~Qrrll~~A~~lLk 473 (495)
.+.+++||+||+||||||+|+. |+..+ .++.+++..++.+|+++|.+|.++||
T Consensus 182 -----------------------~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~-~~~~~~~~~l~~~q~~iL~~a~~~Lk 237 (479)
T 2frx_A 182 -----------------------AAVPEMFDAILLDAPCSGEGVVRKDPDALK-NWSPESNQEIAATQRELIDSAFHALR 237 (479)
T ss_dssp -----------------------HHSTTCEEEEEEECCCCCGGGGGTCTTSSS-SCCHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred -----------------------hhccccCCEEEECCCcCCcccccCCHHHHh-hcCHhHHHHHHHHHHHHHHHHHHhcC
Confidence 0013579999999999999973 55555 57889999999999999999999999
Q ss_pred CCCEEEEEeCCCCCcCccccc
Q 011036 474 PGGIIVYSTCTINPGENEALC 494 (495)
Q Consensus 474 pGG~LVYSTCTi~p~ENE~vV 494 (495)
|||+|||||||++++|||++|
T Consensus 238 pGG~LvysTcs~~~~Ene~vv 258 (479)
T 2frx_A 238 PGGTLVYSTCTLNQEENEAVC 258 (479)
T ss_dssp EEEEEEEEESCCSSTTTHHHH
T ss_pred CCCEEEEecccCCcccCHHHH
Confidence 999999999999999999987
No 4
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=3.6e-40 Score=351.39 Aligned_cols=161 Identities=32% Similarity=0.513 Sum_probs=147.2
Q ss_pred ccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEE
Q 011036 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (495)
Q Consensus 239 ~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~ 318 (495)
.+|.+++|+.+|++++.+|++++|++|||||||||+||++||++|+++|.|+|+|+|+.++..++++++++|++ |.++.
T Consensus 79 ~~G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~ 157 (464)
T 3m6w_A 79 YAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQ 157 (464)
T ss_dssp HTTSEEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEEC
T ss_pred hCCeEEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEE
Confidence 58999999999999999999999999999999999999999999998899999999999999999999999999 99999
Q ss_pred cchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhh
Q 011036 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNM 398 (495)
Q Consensus 319 ~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 398 (495)
.|+.....
T Consensus 158 ~Da~~l~~------------------------------------------------------------------------ 165 (464)
T 3m6w_A 158 APPRALAE------------------------------------------------------------------------ 165 (464)
T ss_dssp SCHHHHHH------------------------------------------------------------------------
T ss_pred CCHHHhhh------------------------------------------------------------------------
Confidence 99866310
Q ss_pred hhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCCCCc---ccchhhhhcHHHHHHhHHHHHHHHHHHHhcCCCC
Q 011036 399 RRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLR---PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPG 475 (495)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~r---p~l~~~~~t~~~l~~~a~~Qrrll~~A~~lLkpG 475 (495)
+.+++||+||+||||||+|+. |+..+ .++.+++..++..|+++|++|.++||||
T Consensus 166 ----------------------~~~~~FD~Il~D~PcSg~G~~rr~pd~~~-~~~~~~~~~l~~~Q~~iL~~a~~~LkpG 222 (464)
T 3m6w_A 166 ----------------------AFGTYFHRVLLDAPCSGEGMFRKDREAAR-HWGPSAPKRMAEVQKALLAQASRLLGPG 222 (464)
T ss_dssp ----------------------HHCSCEEEEEEECCCCCGGGTTTCTTSGG-GCCTTHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred ----------------------hccccCCEEEECCCcCCccccccChHHhh-hcCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 013579999999999999973 66655 6788899999999999999999999999
Q ss_pred CEEEEEeCCCCCcCcccccC
Q 011036 476 GIIVYSTCTINPGENEALCA 495 (495)
Q Consensus 476 G~LVYSTCTi~p~ENE~vV~ 495 (495)
|+|||||||++++|||++|+
T Consensus 223 G~LvysTCs~~~eEne~vv~ 242 (464)
T 3m6w_A 223 GVLVYSTCTFAPEENEGVVA 242 (464)
T ss_dssp EEEEEEESCCCGGGTHHHHH
T ss_pred cEEEEEeccCchhcCHHHHH
Confidence 99999999999999999873
No 5
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=2.3e-39 Score=328.27 Aligned_cols=160 Identities=34% Similarity=0.633 Sum_probs=142.3
Q ss_pred ccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEE
Q 011036 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (495)
Q Consensus 239 ~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~ 318 (495)
.+|.+++|+..|++++.+|++++|++|||+|||||+||++||.++++.|+|+|+|+|+.++..++++++++|+.+++++.
T Consensus 96 ~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~ 175 (315)
T 1ixk_A 96 LTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFH 175 (315)
T ss_dssp HTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEES
T ss_pred hcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEE
Confidence 47999999999999999999999999999999999999999999988899999999999999999999999998899998
Q ss_pred cchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhh
Q 011036 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNM 398 (495)
Q Consensus 319 ~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 398 (495)
.|+.+..
T Consensus 176 ~D~~~~~------------------------------------------------------------------------- 182 (315)
T 1ixk_A 176 SSSLHIG------------------------------------------------------------------------- 182 (315)
T ss_dssp SCGGGGG-------------------------------------------------------------------------
T ss_pred CChhhcc-------------------------------------------------------------------------
Confidence 8875420
Q ss_pred hhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCCCCc---ccchhhhhcHHHHHHhHHHHHHHHHHHHhcCCCC
Q 011036 399 RRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLR---PRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPG 475 (495)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~r---p~l~~~~~t~~~l~~~a~~Qrrll~~A~~lLkpG 475 (495)
. .+++||+||+||||||+|+. |+..+ .++.+++..++..|+++|+++.++||||
T Consensus 183 ---------------------~-~~~~fD~Il~d~Pcsg~g~~~~~p~~~~-~~~~~~~~~~~~~q~~~L~~~~~~LkpG 239 (315)
T 1ixk_A 183 ---------------------E-LNVEFDKILLDAPCTGSGTIHKNPERKW-NRTMDDIKFCQGLQMRLLEKGLEVLKPG 239 (315)
T ss_dssp ---------------------G-GCCCEEEEEEECCTTSTTTCC---------CCHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred ---------------------c-ccccCCEEEEeCCCCCcccccCChhHhh-cCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 0 13479999999999999973 55555 5788999999999999999999999999
Q ss_pred CEEEEEeCCCCCcCccccc
Q 011036 476 GIIVYSTCTINPGENEALC 494 (495)
Q Consensus 476 G~LVYSTCTi~p~ENE~vV 494 (495)
|+|||||||++++|||++|
T Consensus 240 G~lv~stcs~~~~Ene~~v 258 (315)
T 1ixk_A 240 GILVYSTCSLEPEENEFVI 258 (315)
T ss_dssp EEEEEEESCCCGGGTHHHH
T ss_pred CEEEEEeCCCChHHhHHHH
Confidence 9999999999999999987
No 6
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=3.8e-39 Score=327.15 Aligned_cols=164 Identities=29% Similarity=0.479 Sum_probs=136.0
Q ss_pred cccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEE
Q 011036 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTY 317 (495)
Q Consensus 238 ~~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~ 317 (495)
+++|.+++||.+|++++++|++++|++||||||||||||++||.+|+++|+|+|+|+++.++..++++++++|+++|+++
T Consensus 79 ~~~G~~~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~ 158 (309)
T 2b9e_A 79 YRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELA 158 (309)
T ss_dssp HHTTSEEECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHCCeEEEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 36899999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred EcchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhh
Q 011036 318 KLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKN 397 (495)
Q Consensus 318 ~~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 397 (495)
..|+.+...
T Consensus 159 ~~D~~~~~~----------------------------------------------------------------------- 167 (309)
T 2b9e_A 159 EEDFLAVSP----------------------------------------------------------------------- 167 (309)
T ss_dssp ECCGGGSCT-----------------------------------------------------------------------
T ss_pred eCChHhcCc-----------------------------------------------------------------------
Confidence 999865200
Q ss_pred hhhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCCCCc---ccchhh-hhcHHHHHHhHHHHHHHHHHHHhcCC
Q 011036 398 MRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLR---PRLFAA-EETIQSLRNHGKYQRRMFDQAVQLVR 473 (495)
Q Consensus 398 ~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~r---p~l~~~-~~t~~~l~~~a~~Qrrll~~A~~lLk 473 (495)
.... ..+||+||+||||||+|+. |+..+. .++.+++..++.+|++||++|+++|+
T Consensus 168 -------------------~~~~--~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~ 226 (309)
T 2b9e_A 168 -------------------SDPR--YHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS 226 (309)
T ss_dssp -------------------TCGG--GTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT
T ss_pred -------------------cccc--cCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC
Confidence 0000 1369999999999999983 444331 23566888999999999999999998
Q ss_pred CCCEEEEEeCCCCCcCccccc
Q 011036 474 PGGIIVYSTCTINPGENEALC 494 (495)
Q Consensus 474 pGG~LVYSTCTi~p~ENE~vV 494 (495)
||+|||||||++++|||++|
T Consensus 227 -gG~lvYsTCs~~~~Ene~~v 246 (309)
T 2b9e_A 227 -LQRLVYSTCSLCQEENEDVV 246 (309)
T ss_dssp -CCEEEEEESCCCGGGTHHHH
T ss_pred -CCEEEEECCCCChHHhHHHH
Confidence 99999999999999999987
No 7
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=6.8e-38 Score=332.00 Aligned_cols=162 Identities=36% Similarity=0.611 Sum_probs=145.6
Q ss_pred ccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEE
Q 011036 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (495)
Q Consensus 239 ~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~ 318 (495)
.+|.+++|+..|++++.++++++|++|||+|||||+||++||.+|+++|.|+|+|+|+.++..++++++++|+++++++.
T Consensus 237 ~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~ 316 (450)
T 2yxl_A 237 NEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLV 316 (450)
T ss_dssp HTTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred hCceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEE
Confidence 47999999999999999999999999999999999999999999988899999999999999999999999998898888
Q ss_pred cchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhh
Q 011036 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNM 398 (495)
Q Consensus 319 ~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 398 (495)
.|+.+.
T Consensus 317 ~D~~~~-------------------------------------------------------------------------- 322 (450)
T 2yxl_A 317 KDARKA-------------------------------------------------------------------------- 322 (450)
T ss_dssp SCTTCC--------------------------------------------------------------------------
T ss_pred cChhhc--------------------------------------------------------------------------
Confidence 886431
Q ss_pred hhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCCCC---cccchhhhhcHHHHHHhHHHHHHHHHHHHhcCCCC
Q 011036 399 RRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGL---RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPG 475 (495)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~---rp~l~~~~~t~~~l~~~a~~Qrrll~~A~~lLkpG 475 (495)
...|..++||+||+||||||+|+ .|+..+ .++.+++..++.+|+++|.++.++||||
T Consensus 323 -------------------~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~-~~~~~~~~~l~~~q~~iL~~a~~~LkpG 382 (450)
T 2yxl_A 323 -------------------PEIIGEEVADKVLLDAPCTSSGTIGKNPELRW-RLREDKINEMSQLQRELLESAARLVKPG 382 (450)
T ss_dssp -------------------SSSSCSSCEEEEEEECCCCCGGGTTTSTTHHH-HCCTTSHHHHHHHHHHHHHHHHTTEEEE
T ss_pred -------------------chhhccCCCCEEEEcCCCCCCeeeccChhhhh-hCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 00133367999999999999997 466655 5677889999999999999999999999
Q ss_pred CEEEEEeCCCCCcCccccc
Q 011036 476 GIIVYSTCTINPGENEALC 494 (495)
Q Consensus 476 G~LVYSTCTi~p~ENE~vV 494 (495)
|+|||||||++++|||++|
T Consensus 383 G~lvy~tcs~~~~ene~~v 401 (450)
T 2yxl_A 383 GRLLYTTCSIFKEENEKNI 401 (450)
T ss_dssp EEEEEEESCCCGGGTHHHH
T ss_pred cEEEEEeCCCChhhHHHHH
Confidence 9999999999999999876
No 8
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=3e-37 Score=324.88 Aligned_cols=160 Identities=33% Similarity=0.526 Sum_probs=142.0
Q ss_pred ccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEE
Q 011036 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (495)
Q Consensus 239 ~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~ 318 (495)
..|.+++|+..|++++.+|++++|++|||+|||||+||+++|.++.+ |+|+|+|+|+.++..++++++++|+. +.++.
T Consensus 224 ~~G~~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~-~~~~~ 301 (429)
T 1sqg_A 224 EDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQ 301 (429)
T ss_dssp GGTSEEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCC-CEEEE
T ss_pred hCCCeEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCC-eEEEe
Confidence 48999999999999999999999999999999999999999999875 99999999999999999999999985 67788
Q ss_pred cchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhh
Q 011036 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNM 398 (495)
Q Consensus 319 ~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 398 (495)
.|+.+...
T Consensus 302 ~D~~~~~~------------------------------------------------------------------------ 309 (429)
T 1sqg_A 302 GDGRYPSQ------------------------------------------------------------------------ 309 (429)
T ss_dssp CCTTCTHH------------------------------------------------------------------------
T ss_pred Cchhhchh------------------------------------------------------------------------
Confidence 77644100
Q ss_pred hhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCCCC---cccchhhhhcHHHHHHhHHHHHHHHHHHHhcCCCC
Q 011036 399 RRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGL---RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPG 475 (495)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~---rp~l~~~~~t~~~l~~~a~~Qrrll~~A~~lLkpG 475 (495)
.|.+++||+||+|||||++|+ .|+..+ .++.+++..++..|+++|.++.++||||
T Consensus 310 ---------------------~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~-~~~~~~~~~l~~~q~~~L~~a~~~LkpG 367 (429)
T 1sqg_A 310 ---------------------WCGEQQFDRILLDAPCSATGVIRRHPDIKW-LRRDRDIPELAQLQSEILDAIWPHLKTG 367 (429)
T ss_dssp ---------------------HHTTCCEEEEEEECCCCCGGGTTTCTTHHH-HCCTTHHHHHHHHHHHHHHHHGGGEEEE
T ss_pred ---------------------hcccCCCCEEEEeCCCCcccccCCCcchhh-cCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 122357999999999999997 355555 5678889999999999999999999999
Q ss_pred CEEEEEeCCCCCcCccccc
Q 011036 476 GIIVYSTCTINPGENEALC 494 (495)
Q Consensus 476 G~LVYSTCTi~p~ENE~vV 494 (495)
|+|||||||++++|||++|
T Consensus 368 G~lvystcs~~~~ene~~v 386 (429)
T 1sqg_A 368 GTLVYATCSVLPEENSLQI 386 (429)
T ss_dssp EEEEEEESCCCGGGTHHHH
T ss_pred CEEEEEECCCChhhHHHHH
Confidence 9999999999999999886
No 9
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=2.3e-35 Score=292.49 Aligned_cols=163 Identities=31% Similarity=0.510 Sum_probs=137.5
Q ss_pred ccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEE
Q 011036 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (495)
Q Consensus 239 ~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~ 318 (495)
.+|.+++|+..|++++.+|++++|++|||+|||||+||+++|+++++.++|+|+|+|+.++..++++++++|+++++++.
T Consensus 61 ~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~ 140 (274)
T 3ajd_A 61 LFGYYMPQSISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIIN 140 (274)
T ss_dssp HTTSEEECCSGGGHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred hCCeEEEeCHHHHHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEe
Confidence 58999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred cchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhh
Q 011036 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNM 398 (495)
Q Consensus 319 ~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 398 (495)
.|+.+.... ..
T Consensus 141 ~D~~~~~~~------------------------------------------------------------------~~--- 151 (274)
T 3ajd_A 141 ADMRKYKDY------------------------------------------------------------------LL--- 151 (274)
T ss_dssp SCHHHHHHH------------------------------------------------------------------HH---
T ss_pred CChHhcchh------------------------------------------------------------------hh---
Confidence 998764210 00
Q ss_pred hhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCCCCcccchhhhhcHHHHHHhHHHHHHHHHHHHhcCCCCCEE
Q 011036 399 RRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGII 478 (495)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~a~~Qrrll~~A~~lLkpGG~L 478 (495)
...++||+|++|||||++|+..+.. .++.+++..+...|+++|+.|.++|||||+|
T Consensus 152 ----------------------~~~~~fD~Vl~d~Pcs~~g~~~~~p--~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 207 (274)
T 3ajd_A 152 ----------------------KNEIFFDKILLDAPCSGNIIKDKNR--NVSEEDIKYCSLRQKELIDIGIDLLKKDGEL 207 (274)
T ss_dssp ----------------------HTTCCEEEEEEEECCC--------------HHHHTGGGTCHHHHHHHHHHHEEEEEEE
T ss_pred ----------------------hccccCCEEEEcCCCCCCcccccCC--CCCHHHHHHHHHHHHHHHHHHHHhCCCCCEE
Confidence 0134799999999999999854432 4677888899999999999999999999999
Q ss_pred EEEeCCCCCcCccccc
Q 011036 479 VYSTCTINPGENEALC 494 (495)
Q Consensus 479 VYSTCTi~p~ENE~vV 494 (495)
||||||++++|||++|
T Consensus 208 v~stcs~~~~ene~~v 223 (274)
T 3ajd_A 208 VYSTCSMEVEENEEVI 223 (274)
T ss_dssp EEEESCCCTTSSHHHH
T ss_pred EEEECCCChHHhHHHH
Confidence 9999999999999987
No 10
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.76 E-value=2.5e-18 Score=179.67 Aligned_cols=163 Identities=22% Similarity=0.310 Sum_probs=130.8
Q ss_pred ccceeeecCCcccccCCccccccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChH
Q 011036 218 SEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297 (495)
Q Consensus 218 p~GIaVe~~~~v~~lp~~~~~~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~ 297 (495)
+.-+.+++++..|.++...++++|.|+.|+..+.++...+ ++|++|||+|||+|++|.++|.. + ..|+|+|.|+.
T Consensus 173 ~~~~~v~E~g~~f~vd~~~~~~tG~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~--g-a~V~avDis~~ 247 (393)
T 4dmg_A 173 PEVLEVEEDGLRFPIPLALAQKTGYYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARK--G-AYALAVDKDLE 247 (393)
T ss_dssp CSEEEEEETTEEEEEETTTCCTTSSCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT--T-CEEEEEESCHH
T ss_pred CCcEEEEECCEEEEEechhccccCcCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc--C-CeEEEEECCHH
Confidence 3445566667677777677789999999999988877665 47999999999999999999984 3 34999999999
Q ss_pred HHHHHHHHHHHhCCCceEEEEcchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCccccc
Q 011036 298 KVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEK 377 (495)
Q Consensus 298 kv~~i~~~a~~~gl~~i~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (495)
++..++++++.+|+.. .+...|+++.+.
T Consensus 248 al~~a~~n~~~ng~~~-~~~~~D~~~~l~--------------------------------------------------- 275 (393)
T 4dmg_A 248 ALGVLDQAALRLGLRV-DIRHGEALPTLR--------------------------------------------------- 275 (393)
T ss_dssp HHHHHHHHHHHHTCCC-EEEESCHHHHHH---------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCC-cEEEccHHHHHH---------------------------------------------------
Confidence 9999999999999873 455888876431
Q ss_pred ccccccccccccchhhhhhhhhhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCCCCcccchhhhhcHHHHHHh
Q 011036 378 VSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNH 457 (495)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~ 457 (495)
.+ ++.||.|++||||.+-+ ..++...
T Consensus 276 ------------------------------------------~~-~~~fD~Ii~dpP~f~~~-----------~~~~~~~ 301 (393)
T 4dmg_A 276 ------------------------------------------GL-EGPFHHVLLDPPTLVKR-----------PEELPAM 301 (393)
T ss_dssp ------------------------------------------TC-CCCEEEEEECCCCCCSS-----------GGGHHHH
T ss_pred ------------------------------------------Hh-cCCCCEEEECCCcCCCC-----------HHHHHHH
Confidence 01 22499999999985442 1234455
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcc
Q 011036 458 GKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENE 491 (495)
Q Consensus 458 a~~Qrrll~~A~~lLkpGG~LVYSTCTi~p~ENE 491 (495)
.+.+.+++..|.++|||||+|+|+||+....+++
T Consensus 302 ~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~ 335 (393)
T 4dmg_A 302 KRHLVDLVREALRLLAEEGFLWLSSCSYHLRLED 335 (393)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHH
Confidence 6778899999999999999999999999988776
No 11
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.71 E-value=1.6e-17 Score=171.93 Aligned_cols=162 Identities=25% Similarity=0.307 Sum_probs=128.3
Q ss_pred ceeeecCCcccccCCccccccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHH
Q 011036 220 GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299 (495)
Q Consensus 220 GIaVe~~~~v~~lp~~~~~~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv 299 (495)
.+.+.+.+..|.++....+.+|.|+.|...+...+.+ +|++|||+|||+|+.+.++|.. .++|+++|.|+..+
T Consensus 172 ~~~~~e~g~~f~i~~~~~~~~g~f~~~~~~~~~~~~~----~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~ 244 (382)
T 1wxx_A 172 RVQVQEGRVRYLVDLRAGQKTGAYLDQRENRLYMERF----RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEAL 244 (382)
T ss_dssp EEEEEETTEEEEEECSTTSCCCCCGGGHHHHHHGGGC----CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHH
T ss_pred eEEEEECCEEEEEEchhcccCccccchHHHHHHHHhc----CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHH
Confidence 3445555555666666677899998888766555443 7899999999999999999986 47999999999999
Q ss_pred HHHHHHHHHhCCCceEEEEcchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCccccccc
Q 011036 300 MDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVS 379 (495)
Q Consensus 300 ~~i~~~a~~~gl~~i~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (495)
..++++++.+|+.+++++..|+.+.+..
T Consensus 245 ~~a~~n~~~n~~~~~~~~~~d~~~~~~~---------------------------------------------------- 272 (382)
T 1wxx_A 245 RRAEENARLNGLGNVRVLEANAFDLLRR---------------------------------------------------- 272 (382)
T ss_dssp HHHHHHHHHTTCTTEEEEESCHHHHHHH----------------------------------------------------
T ss_pred HHHHHHHHHcCCCCceEEECCHHHHHHH----------------------------------------------------
Confidence 9999999999998899999999775310
Q ss_pred ccccccccccchhhhhhhhhhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCCCCcccchhhhhcHHHHHHhHH
Q 011036 380 NEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGK 459 (495)
Q Consensus 380 ~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~a~ 459 (495)
..+ ...+||.|++|||+.+.+- ..+.....
T Consensus 273 --------------~~~-------------------------~~~~fD~Ii~dpP~~~~~~-----------~~~~~~~~ 302 (382)
T 1wxx_A 273 --------------LEK-------------------------EGERFDLVVLDPPAFAKGK-----------KDVERAYR 302 (382)
T ss_dssp --------------HHH-------------------------TTCCEEEEEECCCCSCCST-----------TSHHHHHH
T ss_pred --------------HHh-------------------------cCCCeeEEEECCCCCCCCh-----------hHHHHHHH
Confidence 000 1347999999999866531 12334556
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEeCCCCCcCc
Q 011036 460 YQRRMFDQAVQLVRPGGIIVYSTCTINPGEN 490 (495)
Q Consensus 460 ~Qrrll~~A~~lLkpGG~LVYSTCTi~p~EN 490 (495)
.+.+++..+.++|+|||+|+++||+.+..++
T Consensus 303 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 333 (382)
T 1wxx_A 303 AYKEVNLRAIKLLKEGGILATASCSHHMTEP 333 (382)
T ss_dssp HHHHHHHHHHHTEEEEEEEEEEECCTTSCHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECCCCCCHH
Confidence 7889999999999999999999999988775
No 12
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.70 E-value=4.6e-17 Score=158.89 Aligned_cols=65 Identities=22% Similarity=0.233 Sum_probs=57.6
Q ss_pred cCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
+.++||++|||+|||||++|.++|.+++++|.|+|+|.|+.++..+.+.+++. ++|.++..|+..
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~ 136 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARF 136 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTC
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEccccc
Confidence 34899999999999999999999999998999999999999998887777764 679999988743
No 13
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.70 E-value=5.6e-17 Score=168.39 Aligned_cols=163 Identities=20% Similarity=0.259 Sum_probs=127.2
Q ss_pred eeeecCCcccccCCccccccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHH
Q 011036 221 IAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300 (495)
Q Consensus 221 IaVe~~~~v~~lp~~~~~~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~ 300 (495)
+.+.+.+..|.++. .++++|.|+.|.....++..++ ++|++|||+|||+|+.+.++|.. +.++|+++|.|+..+.
T Consensus 180 ~~~~e~g~~~~~~~-~~~~tg~f~~~~~~~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~ 254 (396)
T 2as0_A 180 TIIQEGRAKFIVDM-RGQKTGFFLDQRENRLALEKWV--QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIE 254 (396)
T ss_dssp EEEEETTEEEEEES-SSSSSCCCSTTHHHHHHHGGGC--CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHH
T ss_pred EEEEeCCEEEEEec-cccccCccCCHHHHHHHHHHHh--hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHH
Confidence 44445555566666 6678899988877766666554 57999999999999999999974 4569999999999999
Q ss_pred HHHHHHHHhCCC-ceEEEEcchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCccccccc
Q 011036 301 DIQKLAAEMGLK-CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVS 379 (495)
Q Consensus 301 ~i~~~a~~~gl~-~i~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (495)
.++++++.+|++ +++++..|+.+.+..
T Consensus 255 ~a~~n~~~n~~~~~v~~~~~d~~~~~~~---------------------------------------------------- 282 (396)
T 2as0_A 255 TAKENAKLNGVEDRMKFIVGSAFEEMEK---------------------------------------------------- 282 (396)
T ss_dssp HHHHHHHHTTCGGGEEEEESCHHHHHHH----------------------------------------------------
T ss_pred HHHHHHHHcCCCccceEEECCHHHHHHH----------------------------------------------------
Confidence 999999999998 799999998774310
Q ss_pred ccccccccccchhhhhhhhhhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCCCCcccchhhhhcHHHHHHhHH
Q 011036 380 NEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGK 459 (495)
Q Consensus 380 ~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~a~ 459 (495)
..+ ...+||.|++|||+.+.. ...+.....
T Consensus 283 --------------~~~-------------------------~~~~fD~Vi~dpP~~~~~-----------~~~~~~~~~ 312 (396)
T 2as0_A 283 --------------LQK-------------------------KGEKFDIVVLDPPAFVQH-----------EKDLKAGLR 312 (396)
T ss_dssp --------------HHH-------------------------TTCCEEEEEECCCCSCSS-----------GGGHHHHHH
T ss_pred --------------HHh-------------------------hCCCCCEEEECCCCCCCC-----------HHHHHHHHH
Confidence 000 124799999999976542 122334556
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEeCCCCCcCc
Q 011036 460 YQRRMFDQAVQLVRPGGIIVYSTCTINPGEN 490 (495)
Q Consensus 460 ~Qrrll~~A~~lLkpGG~LVYSTCTi~p~EN 490 (495)
.+.+++..+.++|||||+|+|+||+.+..++
T Consensus 313 ~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~ 343 (396)
T 2as0_A 313 AYFNVNFAGLNLVKDGGILVTCSCSQHVDLQ 343 (396)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEECCTTSCHH
T ss_pred HHHHHHHHHHHhcCCCcEEEEEECCCCCCHH
Confidence 7789999999999999999999999887654
No 14
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.69 E-value=6.9e-17 Score=180.12 Aligned_cols=166 Identities=17% Similarity=0.172 Sum_probs=130.2
Q ss_pred ccceeeecCCcccccCCccccccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChH
Q 011036 218 SEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297 (495)
Q Consensus 218 p~GIaVe~~~~v~~lp~~~~~~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~ 297 (495)
+..+.+.+++..|.++....+++|.|+.|.....+..... +|.+|||+|||+|+.+.++|. ++..+|+++|.|+.
T Consensus 499 ~~~~~v~E~g~~~~v~~~~~~~tG~f~d~r~~r~~l~~~~---~g~~VLDlg~GtG~~sl~aa~--~ga~~V~aVD~s~~ 573 (703)
T 3v97_A 499 GEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMS---KGKDFLNLFSYTGSATVHAGL--GGARSTTTVDMSRT 573 (703)
T ss_dssp SCCEEEEETTEEEEECSSSSSSCSCCGGGHHHHHHHHHHC---TTCEEEEESCTTCHHHHHHHH--TTCSEEEEEESCHH
T ss_pred CceEEEEECCEEEEEeccccccCCCcccHHHHHHHHHHhc---CCCcEEEeeechhHHHHHHHH--CCCCEEEEEeCCHH
Confidence 3445666666677777667789999999999888877654 599999999999999999886 45678999999999
Q ss_pred HHHHHHHHHHHhCCC--ceEEEEcchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCccc
Q 011036 298 KVMDIQKLAAEMGLK--CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCK 375 (495)
Q Consensus 298 kv~~i~~~a~~~gl~--~i~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (495)
++..+++|++.+|++ +++++..|+++.+..
T Consensus 574 al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~------------------------------------------------ 605 (703)
T 3v97_A 574 YLEWAERNLRLNGLTGRAHRLIQADCLAWLRE------------------------------------------------ 605 (703)
T ss_dssp HHHHHHHHHHHTTCCSTTEEEEESCHHHHHHH------------------------------------------------
T ss_pred HHHHHHHHHHHcCCCccceEEEecCHHHHHHh------------------------------------------------
Confidence 999999999999997 799999999875320
Q ss_pred ccccccccccccccchhhhhhhhhhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCCCCcccchhhhhcHHHHH
Q 011036 376 EKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLR 455 (495)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~ 455 (495)
..++||.|++||||.+.+-.. .+..
T Consensus 606 ----------------------------------------------~~~~fD~Ii~DPP~f~~~~~~---------~~~~ 630 (703)
T 3v97_A 606 ----------------------------------------------ANEQFDLIFIDPPTFSNSKRM---------EDAF 630 (703)
T ss_dssp ----------------------------------------------CCCCEEEEEECCCSBC----------------CC
T ss_pred ----------------------------------------------cCCCccEEEECCccccCCccc---------hhHH
Confidence 124799999999997654321 1112
Q ss_pred HhHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcc
Q 011036 456 NHGKYQRRMFDQAVQLVRPGGIIVYSTCTINPGENE 491 (495)
Q Consensus 456 ~~a~~Qrrll~~A~~lLkpGG~LVYSTCTi~p~ENE 491 (495)
...+.+++++..|.++|||||+|++|||+-+...++
T Consensus 631 ~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~ 666 (703)
T 3v97_A 631 DVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDL 666 (703)
T ss_dssp BHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCH
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCH
Confidence 344567899999999999999999999995555544
No 15
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.67 E-value=6.1e-17 Score=168.25 Aligned_cols=163 Identities=18% Similarity=0.174 Sum_probs=128.6
Q ss_pred ceeeecCCcccccCCccccccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHH
Q 011036 220 GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299 (495)
Q Consensus 220 GIaVe~~~~v~~lp~~~~~~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv 299 (495)
.+.+++.+..|.++...++++|.|+.|.....++..+ .+|++|||+|||+|+.+.++|.. +.++|+|+|.|+..+
T Consensus 182 ~~~~~~~g~~f~v~~~~~~~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al 256 (396)
T 3c0k_A 182 LLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEAL 256 (396)
T ss_dssp SEEEEETTEEEEECTTTSSTTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHH
T ss_pred eEEEEECCEEEEEeccccccCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHH
Confidence 4556666666777777788899999998887776666 57899999999999999999984 356999999999999
Q ss_pred HHHHHHHHHhCC-C-ceEEEEcchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCccccc
Q 011036 300 MDIQKLAAEMGL-K-CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEK 377 (495)
Q Consensus 300 ~~i~~~a~~~gl-~-~i~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (495)
..++++++.+|+ + +++++..|+.+.+..
T Consensus 257 ~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~-------------------------------------------------- 286 (396)
T 3c0k_A 257 DIARQNVELNKLDLSKAEFVRDDVFKLLRT-------------------------------------------------- 286 (396)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCHHHHHHH--------------------------------------------------
T ss_pred HHHHHHHHHcCCCccceEEEECCHHHHHHH--------------------------------------------------
Confidence 999999999999 7 799999999775310
Q ss_pred ccccccccccccchhhhhhhhhhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCCCCcccchhhhhcHHHHHHh
Q 011036 378 VSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNH 457 (495)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~ 457 (495)
..+ ...+||.|++|||+.+.+-. . +...
T Consensus 287 ----------------~~~-------------------------~~~~fD~Ii~dpP~~~~~~~-~----------~~~~ 314 (396)
T 3c0k_A 287 ----------------YRD-------------------------RGEKFDVIVMDPPKFVENKS-Q----------LMGA 314 (396)
T ss_dssp ----------------HHH-------------------------TTCCEEEEEECCSSTTTCSS-S----------SSCC
T ss_pred ----------------HHh-------------------------cCCCCCEEEECCCCCCCChh-H----------HHHH
Confidence 000 12479999999998665321 1 1122
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeCCCCCcC
Q 011036 458 GKYQRRMFDQAVQLVRPGGIIVYSTCTINPGE 489 (495)
Q Consensus 458 a~~Qrrll~~A~~lLkpGG~LVYSTCTi~p~E 489 (495)
...+.+++..+.++|+|||+|++|+|+.+...
T Consensus 315 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 346 (396)
T 3c0k_A 315 CRGYKDINMLAIQLLNEGGILLTFSCSGLMTS 346 (396)
T ss_dssp CTHHHHHHHHHHHTEEEEEEEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCH
Confidence 34567889999999999999999999988763
No 16
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.64 E-value=5.1e-16 Score=161.34 Aligned_cols=163 Identities=13% Similarity=0.122 Sum_probs=123.3
Q ss_pred eeeecCCcccccCCccccccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHH
Q 011036 221 IAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300 (495)
Q Consensus 221 IaVe~~~~v~~lp~~~~~~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~ 300 (495)
+.+.+.+..|.++...++++|.|..|.....+...++ .+|++|||+|||+|+.+.++|.. +..+|+++|.|+..+.
T Consensus 174 ~~v~e~g~~f~v~~~~~~~t~ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al~ 249 (385)
T 2b78_A 174 FLILENGISYNVFLNDGLMTGIFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSRA 249 (385)
T ss_dssp EEEEETTEEEEECSSSSSCCSSCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHHH
T ss_pred EEEEECCEEEEEeccccccCCcCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHHH
Confidence 3334455556677667778999988887777776665 57899999999999999999873 4469999999999999
Q ss_pred HHHHHHHHhCCC--ceEEEEcchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCcccccc
Q 011036 301 DIQKLAAEMGLK--CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKV 378 (495)
Q Consensus 301 ~i~~~a~~~gl~--~i~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (495)
.++++++.+|++ +++++..|+.+.+...
T Consensus 250 ~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~-------------------------------------------------- 279 (385)
T 2b78_A 250 LSLAHFEANHLDMANHQLVVMDVFDYFKYA-------------------------------------------------- 279 (385)
T ss_dssp HHHHHHHHTTCCCTTEEEEESCHHHHHHHH--------------------------------------------------
T ss_pred HHHHHHHHcCCCccceEEEECCHHHHHHHH--------------------------------------------------
Confidence 999999999997 8999999998753210
Q ss_pred cccccccccccchhhhhhhhhhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCCCCcccchhhhhcHHHHHHhH
Q 011036 379 SNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHG 458 (495)
Q Consensus 379 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~a 458 (495)
.+ ...+||.|++|||+.+.+.. .+....
T Consensus 280 ----------------~~-------------------------~~~~fD~Ii~DPP~~~~~~~-----------~~~~~~ 307 (385)
T 2b78_A 280 ----------------RR-------------------------HHLTYDIIIIDPPSFARNKK-----------EVFSVS 307 (385)
T ss_dssp ----------------HH-------------------------TTCCEEEEEECCCCC----------------CCCCHH
T ss_pred ----------------HH-------------------------hCCCccEEEECCCCCCCChh-----------hHHHHH
Confidence 00 12479999999998654210 011123
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEeCCCCCcC
Q 011036 459 KYQRRMFDQAVQLVRPGGIIVYSTCTINPGE 489 (495)
Q Consensus 459 ~~Qrrll~~A~~lLkpGG~LVYSTCTi~p~E 489 (495)
+.+++++..|.++|+|||+|++|+|+-+...
T Consensus 308 ~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~ 338 (385)
T 2b78_A 308 KDYHKLIRQGLEILSENGLIIASTNAANMTV 338 (385)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeCCCcCCH
Confidence 4467889999999999999999999987643
No 17
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.62 E-value=1.3e-15 Score=155.45 Aligned_cols=166 Identities=19% Similarity=0.174 Sum_probs=128.5
Q ss_pred cceeeecCCcccccCCccccccccEEEccccHHHHHhhcC-CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChH
Q 011036 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALD-PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297 (495)
Q Consensus 219 ~GIaVe~~~~v~~lp~~~~~~~G~i~lQ~l~S~v~~~~Ld-pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~ 297 (495)
..+.+++++..|.+.....+.+|.+..|......+...+. ..+|.+|||+|||+|+.+.++|.. +. +|+++|.|+.
T Consensus 110 ~~~~i~e~g~~f~v~~~~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~--ga-~V~~VD~s~~ 186 (332)
T 2igt_A 110 ETWPLSLLGVEFLGRFTAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA--GA-EVTHVDASKK 186 (332)
T ss_dssp SEEEEEETTEEEEEECCSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT--TC-EEEEECSCHH
T ss_pred CceEEEECCEEEEEecCccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc--CC-EEEEEECCHH
Confidence 5667777777788887777889999999887766666654 457889999999999999999873 33 9999999999
Q ss_pred HHHHHHHHHHHhCCCc--eEEEEcchhHHHHhhCCCCCCCCccCCCCCccccccccccccccccccchhccCCCCCCccc
Q 011036 298 KVMDIQKLAAEMGLKC--ITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCK 375 (495)
Q Consensus 298 kv~~i~~~a~~~gl~~--i~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (495)
++..++++++.+|+.+ ++++..|+++.+...
T Consensus 187 al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~----------------------------------------------- 219 (332)
T 2igt_A 187 AIGWAKENQVLAGLEQAPIRWICEDAMKFIQRE----------------------------------------------- 219 (332)
T ss_dssp HHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHH-----------------------------------------------
T ss_pred HHHHHHHHHHHcCCCccceEEEECcHHHHHHHH-----------------------------------------------
Confidence 9999999999999975 999999997753100
Q ss_pred ccccccccccccccchhhhhhhhhhccCCCCCCccCCCCccCCCCCCCCCccEEEEcCCCCCCCCcccchhhhhcHHHHH
Q 011036 376 EKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLR 455 (495)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~g~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~ 455 (495)
.+ ..++||.|++||||.+.+-...++.
T Consensus 220 ------------------~~--------------------------~~~~fD~Ii~dPP~~~~~~~~~~~~--------- 246 (332)
T 2igt_A 220 ------------------ER--------------------------RGSTYDIILTDPPKFGRGTHGEVWQ--------- 246 (332)
T ss_dssp ------------------HH--------------------------HTCCBSEEEECCCSEEECTTCCEEE---------
T ss_pred ------------------Hh--------------------------cCCCceEEEECCccccCCchHHHHH---------
Confidence 00 0247999999999988763322221
Q ss_pred HhHHHHHHHHHHHHhcCCCCCE-EEEEeCCCCCc
Q 011036 456 NHGKYQRRMFDQAVQLVRPGGI-IVYSTCTINPG 488 (495)
Q Consensus 456 ~~a~~Qrrll~~A~~lLkpGG~-LVYSTCTi~p~ 488 (495)
+...+.+++..+.++|||||+ ++.++|+....
T Consensus 247 -~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~ 279 (332)
T 2igt_A 247 -LFDHLPLMLDICREILSPKALGLVLTAYSIRAS 279 (332)
T ss_dssp -HHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSC
T ss_pred -HHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCC
Confidence 223456889999999999999 56677876543
No 18
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.58 E-value=3e-15 Score=156.52 Aligned_cols=80 Identities=10% Similarity=-0.069 Sum_probs=67.0
Q ss_pred EccccHHHHHh---hcCC--CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc--eEEE
Q 011036 245 LQNLPSIVTAH---ALDP--QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC--ITTY 317 (495)
Q Consensus 245 lQ~l~S~v~~~---~Ldp--qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~--i~~~ 317 (495)
.|.....+... .+.. ++|++|||||||+|++++++|..+++.++|+|+|+++..+..+++|++.+|+.+ ++++
T Consensus 31 ~~~~nR~l~~~~~~~~~~~~~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~ 110 (392)
T 3axs_A 31 RMRVNRDLAVLGLEYLCKKLGRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIH 110 (392)
T ss_dssp GGHHHHHHHHHHHHHHHHHHCSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CcHHHHHHHHHHHHHHhhccCCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEE
Confidence 56555555422 2222 679999999999999999999987666899999999999999999999999986 9999
Q ss_pred EcchhHH
Q 011036 318 KLDALKA 324 (495)
Q Consensus 318 ~~Da~~~ 324 (495)
..|+.+.
T Consensus 111 ~~Da~~~ 117 (392)
T 3axs_A 111 GMEANFF 117 (392)
T ss_dssp CSCHHHH
T ss_pred eCCHHHH
Confidence 9999775
No 19
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.54 E-value=2.9e-14 Score=135.04 Aligned_cols=64 Identities=19% Similarity=0.192 Sum_probs=57.6
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhC-----CCceEEEEcchh
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG-----LKCITTYKLDAL 322 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~g-----l~~i~~~~~Da~ 322 (495)
+++|.+|||+|||+|.+|.+++.+++..++|+++|+|+.++..++++++++| ..++.+...|+.
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 143 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR 143 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcc
Confidence 7899999999999999999999988777899999999999999999999876 357888887764
No 20
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.53 E-value=1.8e-14 Score=149.78 Aligned_cols=79 Identities=20% Similarity=0.069 Sum_probs=64.1
Q ss_pred EccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh---------------
Q 011036 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--------------- 309 (495)
Q Consensus 245 lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~--------------- 309 (495)
.|.....+...++...+|.+|||+|||+|.++.++|..++. .+|+|+|+++.++..+++|++.+
T Consensus 31 ~~~~nr~l~~~~l~~~~~~~VLDl~aGtG~~~l~~a~~~~~-~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~ 109 (378)
T 2dul_A 31 RMALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETPA-EEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILK 109 (378)
T ss_dssp GGHHHHHHHHHHHHHHCCSEEEESSCTTSHHHHHHHHHSSC-SEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEE
T ss_pred chHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHhccccccccccccccc
Confidence 35555544333332236899999999999999999998753 57999999999999999999999
Q ss_pred CCCceEEEEcchhHH
Q 011036 310 GLKCITTYKLDALKA 324 (495)
Q Consensus 310 gl~~i~~~~~Da~~~ 324 (495)
|+.++++++.|+.+.
T Consensus 110 gl~~i~v~~~Da~~~ 124 (378)
T 2dul_A 110 GEKTIVINHDDANRL 124 (378)
T ss_dssp SSSEEEEEESCHHHH
T ss_pred CCCceEEEcCcHHHH
Confidence 887799999998764
No 21
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.50 E-value=2.1e-13 Score=139.19 Aligned_cols=125 Identities=25% Similarity=0.258 Sum_probs=101.6
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHHHHhhCCCCC
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~~~~~~~~~~ 333 (495)
..+++++++.+|||+|||+|..+..+|...++.+.|+++|+|+..+..++++++..|+.+|++...|+.+..
T Consensus 196 ~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~-------- 267 (354)
T 3tma_A 196 LRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLP-------- 267 (354)
T ss_dssp HHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGG--------
T ss_pred HHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCc--------
Confidence 455678899999999999999999999876456899999999999999999999999989999999986521
Q ss_pred CCCccCCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCCCccCCC
Q 011036 334 EPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGG 413 (495)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~g 413 (495)
T Consensus 268 -------------------------------------------------------------------------------- 267 (354)
T 3tma_A 268 -------------------------------------------------------------------------------- 267 (354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccCCCCCCCCCccEEEEcCCCCCCCCcccchhhhhcHHHHHHhHHHHHHHHHHHHhcCCCCCEEEEEeCCC
Q 011036 414 RAENSKGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTI 485 (495)
Q Consensus 414 ~~~~~~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~a~~Qrrll~~A~~lLkpGG~LVYSTCTi 485 (495)
+...+||.|++|||| |.| ..+.......+++++..+.++|||||.+++.||.-
T Consensus 268 -------~~~~~~D~Ii~npPy---g~r---------~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 268 -------RFFPEVDRILANPPH---GLR---------LGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp -------GTCCCCSEEEECCCS---CC-------------CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred -------cccCCCCEEEECCCC---cCc---------cCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 112358999999997 322 11122345678899999999999999999999853
No 22
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.48 E-value=2.6e-13 Score=132.13 Aligned_cols=72 Identities=17% Similarity=0.201 Sum_probs=64.8
Q ss_pred HHHHHhhcCCC-CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhH
Q 011036 250 SIVTAHALDPQ-KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (495)
Q Consensus 250 S~v~~~~Ldpq-pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~ 323 (495)
+++.+.+++++ ++.+|||+|||+|..+..+|... .++|+|+|+++.++..++++++.+++. +++++..|+.+
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~--~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~ 110 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT--KAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKK 110 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTC--CCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGG
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhc--CCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHH
Confidence 78888899999 99999999999999999999863 349999999999999999999999997 49999988755
No 23
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.45 E-value=1.7e-13 Score=134.70 Aligned_cols=126 Identities=21% Similarity=0.228 Sum_probs=98.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHHHHhhCCCCCCCCccC
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCN 339 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (495)
.++.+|||+|||+|..+..++..+ +..+|+|+|.|+.++..++++++.+|+.+++++..|+...
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~--------------- 171 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA--------------- 171 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG---------------
T ss_pred cCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh---------------
Confidence 678899999999999999999876 4579999999999999999999999998898888886441
Q ss_pred CCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCCCccCCCCccCCC
Q 011036 340 SKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENSK 419 (495)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~g~~~~~~ 419 (495)
T Consensus 172 -------------------------------------------------------------------------------- 171 (276)
T 2b3t_A 172 -------------------------------------------------------------------------------- 171 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccEEEEcCCCCCCCC----------cccchhhhhcHHHHHHhHHHHHHHHHHHHhcCCCCCEEEEEeCCCCC
Q 011036 420 GFSPNSFDRVLLDAPCSALGL----------RPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTINP 487 (495)
Q Consensus 420 ~f~~~sFDrVLlDaPCSglG~----------rp~l~~~~~t~~~l~~~a~~Qrrll~~A~~lLkpGG~LVYSTCTi~p 487 (495)
+.+++||.|+++|||.+.+. .|+... . .-......+++++..+.++|||||.+++..+..+.
T Consensus 172 -~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al-~----~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 243 (276)
T 2b3t_A 172 -LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTAL-V----AADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQG 243 (276)
T ss_dssp -GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTT-B----CHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCH
T ss_pred -cccCCccEEEECCCCCCccccccChhhhhcCcHHHH-c----CCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHH
Confidence 11357999999999998754 122111 0 00112245688999999999999999998765543
No 24
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.45 E-value=1.7e-13 Score=135.70 Aligned_cols=63 Identities=17% Similarity=0.240 Sum_probs=55.5
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~ 323 (495)
.++|++|||+|||+|+.+.++|.... .+|+|+|.|+..+..++++++.+|+.+ ++++..|+.+
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~ 186 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRD 186 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTT
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHH
Confidence 46799999999999999999998632 289999999999999999999999976 8888888744
No 25
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.45 E-value=2.2e-13 Score=134.01 Aligned_cols=82 Identities=15% Similarity=0.238 Sum_probs=59.7
Q ss_pred cccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh-CCCceEEEE
Q 011036 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-GLKCITTYK 318 (495)
Q Consensus 240 ~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~-gl~~i~~~~ 318 (495)
.+...++......+...+++++|++|||+|||+|+.+.+++..+.+.++|+++|.++.++..+++++++. |..+++++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~ 168 (275)
T 1yb2_A 89 RNTQIISEIDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR 168 (275)
T ss_dssp -----------------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC
T ss_pred ccccccChhhHHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEE
Confidence 3444555555566777889999999999999999999999998666789999999999999999999998 887888887
Q ss_pred cch
Q 011036 319 LDA 321 (495)
Q Consensus 319 ~Da 321 (495)
.|+
T Consensus 169 ~d~ 171 (275)
T 1yb2_A 169 SDI 171 (275)
T ss_dssp SCT
T ss_pred Cch
Confidence 775
No 26
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.44 E-value=1e-12 Score=129.08 Aligned_cols=72 Identities=22% Similarity=0.299 Sum_probs=62.9
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchhH
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~~ 323 (495)
.....+++.+|.+|||+|||+|..+..++..+++.++|+++|.|+.++..++++++.+|+ .+++++..|+.+
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 175 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISE 175 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGG
T ss_pred HHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH
Confidence 445667899999999999999999999999877678999999999999999999999998 568887777643
No 27
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.44 E-value=4.8e-13 Score=122.53 Aligned_cols=61 Identities=15% Similarity=0.163 Sum_probs=54.8
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
.+++|.+|||+|||+|..|.++|.. .++|+|+|+|+.++..+++++++.|+.+++++..|+
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~ 79 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGH 79 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCG
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcH
Confidence 3568999999999999999999986 589999999999999999999999998888888544
No 28
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.44 E-value=7.9e-13 Score=125.45 Aligned_cols=79 Identities=13% Similarity=0.131 Sum_probs=67.6
Q ss_pred ccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhHH
Q 011036 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKA 324 (495)
Q Consensus 246 Q~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~~ 324 (495)
+.....+...++...++.+|||+|||+|..|.++|..++..++|+++|+++.++..+++++++.|+. .|+++..|+.+.
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 122 (221)
T 3u81_A 43 GDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDL 122 (221)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHH
Confidence 3334455556666677899999999999999999998876789999999999999999999999997 499999998774
No 29
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.42 E-value=1e-12 Score=121.53 Aligned_cols=67 Identities=21% Similarity=0.346 Sum_probs=60.5
Q ss_pred cCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchhH
Q 011036 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~~ 323 (495)
+.+++|.+|||+|||+|..+..++..+++.++|+|+|+|+.++..+++++++.|+ .+++++..|+..
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 85 (197)
T 3eey_A 18 MFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQN 85 (197)
T ss_dssp HHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGG
T ss_pred hcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHH
Confidence 3567899999999999999999999887778999999999999999999999998 679999988744
No 30
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.42 E-value=9.7e-13 Score=127.80 Aligned_cols=78 Identities=17% Similarity=0.182 Sum_probs=67.1
Q ss_pred ccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhHHH
Q 011036 248 LPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKAV 325 (495)
Q Consensus 248 l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~~~ 325 (495)
....+...++...++.+|||+|||+|..|.++|..+.+.++|+++|+|+.++..+++++++.|+. +|+++..|+.+.+
T Consensus 50 ~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l 128 (248)
T 3tfw_A 50 NQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSL 128 (248)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred HHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 33444555556678899999999999999999998876799999999999999999999999997 6999999987743
No 31
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.41 E-value=4.8e-13 Score=130.66 Aligned_cols=64 Identities=20% Similarity=0.320 Sum_probs=57.6
Q ss_pred cCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
|+++||++|||++||+|..|.++|...+++|.|+|+|.|+.++..+++++++. .+|..+..|+.
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~ 136 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDAR 136 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTT
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEecc
Confidence 67999999999999999999999999999999999999999999998888764 47877777753
No 32
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.38 E-value=1e-11 Score=114.66 Aligned_cols=63 Identities=21% Similarity=0.236 Sum_probs=56.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~ 324 (495)
.+|.+|||+|||+|..+..++. .+..+|+|+|.|+..+..++++++.+|+.+++++..|+.+.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 105 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALS--RGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAV 105 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHH--TTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHH--CCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHH
Confidence 5789999999999999998776 34568999999999999999999999998899999998774
No 33
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.38 E-value=8.1e-13 Score=125.12 Aligned_cols=61 Identities=10% Similarity=0.035 Sum_probs=55.2
Q ss_pred CCCCCCeEEEecCC-CChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 258 DPQKGERILDMCAA-PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 258 dpqpGerVLDmCAa-PGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
..++|.+|||+||| +|..+..++... .++|+|+|+|+..+..++++++.+|+ +++++..|+
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~ 113 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNG 113 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSS
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCc
Confidence 35789999999999 999999999875 57999999999999999999999998 788888875
No 34
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.37 E-value=8.7e-12 Score=116.27 Aligned_cols=81 Identities=17% Similarity=0.136 Sum_probs=67.3
Q ss_pred ccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcc
Q 011036 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320 (495)
Q Consensus 241 G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~D 320 (495)
|.+ .+..........+++++|.+|||+|||+|..+..+|... +.++|+++|+|+.++..++++++..|+.+++++..|
T Consensus 21 g~~-~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d 98 (204)
T 3e05_A 21 KLI-TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAF 98 (204)
T ss_dssp TTS-CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECC
T ss_pred CcC-ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 555 333333455667789999999999999999999999874 468999999999999999999999999889999888
Q ss_pred hhH
Q 011036 321 ALK 323 (495)
Q Consensus 321 a~~ 323 (495)
+..
T Consensus 99 ~~~ 101 (204)
T 3e05_A 99 APE 101 (204)
T ss_dssp TTT
T ss_pred hhh
Confidence 643
No 35
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.37 E-value=3e-12 Score=124.99 Aligned_cols=73 Identities=16% Similarity=0.202 Sum_probs=63.3
Q ss_pred HHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh-C--CCceEEEEcchhH
Q 011036 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-G--LKCITTYKLDALK 323 (495)
Q Consensus 251 ~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~-g--l~~i~~~~~Da~~ 323 (495)
......+++++|.+|||++||+|..+.+++..+++.++|+++|.|+..+..++++++.. | ..++.+...|+.+
T Consensus 89 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 89 AQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred HHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 34556778999999999999999999999998777789999999999999999999988 7 5678888877643
No 36
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.37 E-value=3e-12 Score=120.89 Aligned_cols=76 Identities=18% Similarity=0.115 Sum_probs=65.7
Q ss_pred cHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchhHH
Q 011036 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKA 324 (495)
Q Consensus 249 ~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~~ 324 (495)
...+...++...++.+|||+|||+|..|.++|..+.+.++|+++|+++.++..+++++++.|+.+ |+++..|+.+.
T Consensus 46 ~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 122 (223)
T 3duw_A 46 QGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDS 122 (223)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 34445555556678999999999999999999988767899999999999999999999999975 99999998764
No 37
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.36 E-value=9.5e-12 Score=117.48 Aligned_cols=70 Identities=21% Similarity=0.349 Sum_probs=62.7
Q ss_pred HHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhH
Q 011036 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (495)
Q Consensus 251 ~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~ 323 (495)
..+...+++.+|++|||+|||+|..+..+|.. .++|+|+|+|+.++..++++++++|+. +++++..|+..
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 115 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA 115 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG
T ss_pred HHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh
Confidence 34556778999999999999999999999986 579999999999999999999999998 89999988754
No 38
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.35 E-value=2.4e-12 Score=132.63 Aligned_cols=66 Identities=15% Similarity=0.131 Sum_probs=57.9
Q ss_pred hcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHHH
Q 011036 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~~ 325 (495)
.++++ |++|||+|||+|+.|..+|.. .++|+|+|.|+..+..++++++.+|+++++++.+|+.+.+
T Consensus 209 ~~~~~-~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~ 274 (369)
T 3bt7_A 209 VTKGS-KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFT 274 (369)
T ss_dssp HTTTC-CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHH
T ss_pred HhhcC-CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHH
Confidence 34544 689999999999999988873 3699999999999999999999999999999999997754
No 39
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.35 E-value=6.4e-13 Score=126.71 Aligned_cols=82 Identities=24% Similarity=0.278 Sum_probs=70.1
Q ss_pred ccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEc
Q 011036 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKL 319 (495)
Q Consensus 241 G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~ 319 (495)
|..+.|...+.+...++.+.++.+|||+|||+|..+.++|..+. .++|+++|+++.++..++++++..|+. .|.++..
T Consensus 34 ~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 112 (233)
T 2gpy_A 34 QVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFG 112 (233)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred CCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC
Confidence 44456666677777777888899999999999999999999875 589999999999999999999999985 5888888
Q ss_pred chhH
Q 011036 320 DALK 323 (495)
Q Consensus 320 Da~~ 323 (495)
|+..
T Consensus 113 d~~~ 116 (233)
T 2gpy_A 113 DALQ 116 (233)
T ss_dssp CGGG
T ss_pred CHHH
Confidence 8755
No 40
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.35 E-value=4.8e-12 Score=121.86 Aligned_cols=72 Identities=17% Similarity=0.130 Sum_probs=64.8
Q ss_pred HHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchh
Q 011036 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDAL 322 (495)
Q Consensus 251 ~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~ 322 (495)
......+++++|.+|||+|||+|..+.+++..+++.++|+++|.|+.++..++++++..|+.+ ++++..|+.
T Consensus 83 ~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 155 (255)
T 3mb5_A 83 ALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY 155 (255)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGG
T ss_pred HHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchh
Confidence 355667889999999999999999999999988778999999999999999999999999977 888888764
No 41
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.34 E-value=1.5e-12 Score=130.19 Aligned_cols=63 Identities=17% Similarity=0.256 Sum_probs=56.2
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~ 323 (495)
.++|++|||||||.|+.+.++|.. +..+|+|+|+|+..+..+++|++.+|+.. |+++.+|+.+
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~ 186 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRD 186 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTT
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHH
Confidence 478999999999999999999874 34689999999999999999999999975 8889888744
No 42
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=2.3e-12 Score=127.34 Aligned_cols=80 Identities=16% Similarity=0.086 Sum_probs=65.6
Q ss_pred EEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 243 IFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 243 i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
++.|.........+..+++|++|||+|||+|..+..+|...+ .++|+|+|.|+..+..++++++.+|+.++.++..|+.
T Consensus 101 f~~~~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~ 179 (272)
T 3a27_A 101 MWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNR 179 (272)
T ss_dssp CCCGGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGG
T ss_pred EECCCchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChH
Confidence 444544443333445578899999999999999999998753 5799999999999999999999999999999998875
Q ss_pred H
Q 011036 323 K 323 (495)
Q Consensus 323 ~ 323 (495)
+
T Consensus 180 ~ 180 (272)
T 3a27_A 180 D 180 (272)
T ss_dssp G
T ss_pred H
Confidence 4
No 43
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.32 E-value=3.7e-12 Score=119.59 Aligned_cols=51 Identities=22% Similarity=0.485 Sum_probs=42.7
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
+++|.+|||+|||||++|.++|.. .++|+|+|+++.+ .+.+++++..|+..
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~ 73 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EIAGVRFIRCDIFK 73 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CCTTCEEEECCTTS
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cCCCeEEEEccccC
Confidence 478999999999999999999986 6899999999742 34578888888644
No 44
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.32 E-value=3.5e-12 Score=122.45 Aligned_cols=70 Identities=14% Similarity=0.126 Sum_probs=62.8
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC--ceEEEEcchhHH
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK--CITTYKLDALKA 324 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~--~i~~~~~Da~~~ 324 (495)
....++++.+|||+|||+|..|..+|..+.+.++|+++|+|+.++..+++++++.|+. +|+++..|+.+.
T Consensus 50 ~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~ 121 (221)
T 3dr5_A 50 ATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDV 121 (221)
T ss_dssp HHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH
T ss_pred HhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHH
Confidence 3456667779999999999999999998877799999999999999999999999987 699999998774
No 45
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.31 E-value=3.7e-12 Score=120.19 Aligned_cols=76 Identities=14% Similarity=0.180 Sum_probs=65.4
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchhHHH
Q 011036 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAV 325 (495)
Q Consensus 250 S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~~~ 325 (495)
..+...++...++.+|||+|||+|..|.++|..+.+.++|+++|.++.++..+++++++.|+.+ |+++..|+...+
T Consensus 53 ~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 129 (225)
T 3tr6_A 53 AQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTL 129 (225)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHH
Confidence 3444455555678899999999999999999988767999999999999999999999999975 999999987643
No 46
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.31 E-value=1.3e-11 Score=115.88 Aligned_cols=62 Identities=13% Similarity=0.072 Sum_probs=54.8
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC--CceEEEEcchhHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL--KCITTYKLDALKA 324 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl--~~i~~~~~Da~~~ 324 (495)
+|.+|||+|||+|..+..++.. ..++|+|+|.|+.++..++++++.+|+ .+++++..|+.+.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~ 116 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDF 116 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHH
T ss_pred CCCeEEEcCCccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHH
Confidence 6889999999999999887663 346999999999999999999999998 6899999998663
No 47
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.30 E-value=7.3e-12 Score=120.95 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=63.8
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhHHH
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKAV 325 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~~~ 325 (495)
+...++...++.+|||+|||+|..|.++|..+.+.++|+++|+++..+..+++++++.|+. .|+++..|+.+.+
T Consensus 61 ~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l 135 (237)
T 3c3y_A 61 LMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLAL 135 (237)
T ss_dssp HHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred HHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 3344444456789999999999999999999876799999999999999999999999996 5999999998753
No 48
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.30 E-value=1.7e-11 Score=110.72 Aligned_cols=69 Identities=19% Similarity=0.223 Sum_probs=59.4
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (495)
.....+++++|.+|||+|||+|..+.+++... +.++|+++|.|+.++..++++++++|+. ++ .+..|+.
T Consensus 16 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~ 85 (178)
T 3hm2_A 16 LAISALAPKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAP 85 (178)
T ss_dssp HHHHHHCCCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTT
T ss_pred HHHHHhcccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchH
Confidence 34456688999999999999999999999875 4589999999999999999999999987 77 7777753
No 49
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.29 E-value=1.8e-11 Score=115.11 Aligned_cols=62 Identities=13% Similarity=0.052 Sum_probs=55.1
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~ 324 (495)
+|.+|||+|||+|..+..++.. ...+|+++|.|+.++..++++++..|+.+++++..|+.+.
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~--~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~ 115 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSR--YAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSF 115 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHhc--CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHH
Confidence 6899999999999999887664 3359999999999999999999999998899999998763
No 50
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.29 E-value=1.6e-11 Score=124.05 Aligned_cols=72 Identities=13% Similarity=0.178 Sum_probs=60.9
Q ss_pred HHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhC-----------CCceEEEEc
Q 011036 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG-----------LKCITTYKL 319 (495)
Q Consensus 251 ~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~g-----------l~~i~~~~~ 319 (495)
......+++.+|.+|||+|||+|..+.+++..++..++|+++|+++..+..++++++.+| ..+++++..
T Consensus 95 ~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~ 174 (336)
T 2b25_A 95 NMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK 174 (336)
T ss_dssp HHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence 344566789999999999999999999999987777999999999999999999998754 246777777
Q ss_pred chh
Q 011036 320 DAL 322 (495)
Q Consensus 320 Da~ 322 (495)
|+.
T Consensus 175 d~~ 177 (336)
T 2b25_A 175 DIS 177 (336)
T ss_dssp CTT
T ss_pred ChH
Confidence 753
No 51
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.28 E-value=1.4e-11 Score=114.91 Aligned_cols=81 Identities=19% Similarity=0.249 Sum_probs=69.3
Q ss_pred cccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEc
Q 011036 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319 (495)
Q Consensus 240 ~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~ 319 (495)
.|.++.|..-.......+++++|.+|||+|||+|..+.+++.. .++|+++|+|+.++..++++++.+|+++++++..
T Consensus 56 ~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 132 (210)
T 3lbf_A 56 QGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHG 132 (210)
T ss_dssp TSCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEEC
Confidence 3555555554555667788999999999999999999999987 4799999999999999999999999999999999
Q ss_pred chhH
Q 011036 320 DALK 323 (495)
Q Consensus 320 Da~~ 323 (495)
|+.+
T Consensus 133 d~~~ 136 (210)
T 3lbf_A 133 DGWQ 136 (210)
T ss_dssp CGGG
T ss_pred Cccc
Confidence 8754
No 52
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.28 E-value=7.5e-13 Score=122.52 Aligned_cols=62 Identities=23% Similarity=0.280 Sum_probs=37.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.++.+|||+|||+|..+.+++... ...+|+++|+|+.++..++++++..|+ +++++..|+.+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~ 90 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIE 90 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC--------------------CCHHHHHH
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHh
Confidence 789999999999999999999975 357999999999999999999998887 77777777765
No 53
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.28 E-value=1.5e-11 Score=117.08 Aligned_cols=62 Identities=29% Similarity=0.385 Sum_probs=52.9
Q ss_pred cCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
+.+++|++|||+|||+|..|.++|.+.+ .|+|+|+|.|+.++..+.+.+++. .++.++..|+
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~ 114 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDA 114 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCT
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCC
Confidence 4578999999999999999999999886 789999999999998888888764 4676666665
No 54
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.27 E-value=1.9e-11 Score=125.97 Aligned_cols=80 Identities=15% Similarity=0.090 Sum_probs=62.2
Q ss_pred cEEEccccHHHHHhh-cCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcc
Q 011036 242 EIFLQNLPSIVTAHA-LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320 (495)
Q Consensus 242 ~i~lQ~l~S~v~~~~-LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~D 320 (495)
....|+..+.+.... ....+|.+|||+| |+|..+..++.. +..++|+++|+|+.++..++++++++|+.+|+++..|
T Consensus 152 ~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D 229 (373)
T 2qm3_A 152 YVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFD 229 (373)
T ss_dssp CBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred ecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEECh
Confidence 344455544444332 2345789999999 999999888764 4457999999999999999999999999889999888
Q ss_pred hhH
Q 011036 321 ALK 323 (495)
Q Consensus 321 a~~ 323 (495)
+.+
T Consensus 230 ~~~ 232 (373)
T 2qm3_A 230 LRK 232 (373)
T ss_dssp TTS
T ss_pred hhh
Confidence 743
No 55
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.27 E-value=6.8e-12 Score=125.03 Aligned_cols=63 Identities=21% Similarity=0.177 Sum_probs=56.7
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~ 323 (495)
+.++.+|||+|||+|..+.++|.. +..+|+|+|+|+.++..++++++.+|+.+ ++++..|++.
T Consensus 121 ~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~ 184 (284)
T 1nv8_A 121 KYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE 184 (284)
T ss_dssp HHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG
T ss_pred ccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh
Confidence 346789999999999999999987 56899999999999999999999999986 9999988754
No 56
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.27 E-value=2.6e-11 Score=116.36 Aligned_cols=72 Identities=15% Similarity=0.195 Sum_probs=63.6
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh-CCCceEEEEcchhH
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-GLKCITTYKLDALK 323 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~-gl~~i~~~~~Da~~ 323 (495)
.....+++++|.+|||++||+|..+.+++..+++.++|+++|.|+.++..++++++.. |..++++...|+.+
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~ 159 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE 159 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh
Confidence 4556678899999999999999999999998776789999999999999999999988 87788888888643
No 57
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.27 E-value=2.6e-12 Score=124.89 Aligned_cols=81 Identities=15% Similarity=0.156 Sum_probs=68.5
Q ss_pred EccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhH
Q 011036 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (495)
Q Consensus 245 lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~ 323 (495)
++.....+...++...++.+|||+|||+|..|.++|..+...++|+++|+++.++..+++++++.|+. +|+++..|+..
T Consensus 44 i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 123 (242)
T 3r3h_A 44 VAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALD 123 (242)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 34444555555556667889999999999999999998876799999999999999999999999996 79999999977
Q ss_pred HH
Q 011036 324 AV 325 (495)
Q Consensus 324 ~~ 325 (495)
.+
T Consensus 124 ~l 125 (242)
T 3r3h_A 124 TL 125 (242)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 58
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.27 E-value=9e-12 Score=126.88 Aligned_cols=60 Identities=18% Similarity=0.170 Sum_probs=53.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchhH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~~ 323 (495)
.+|++|||+|||+|+.+.+ |. ..++|+|+|.|+..+..++++++.+|+ .+++++..|+.+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~ 254 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVRE 254 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred CCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHH
Confidence 5799999999999999988 76 367999999999999999999999998 479999988754
No 59
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.26 E-value=4.8e-11 Score=108.32 Aligned_cols=70 Identities=16% Similarity=0.097 Sum_probs=60.5
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc--eEEEEcchh
Q 011036 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC--ITTYKLDAL 322 (495)
Q Consensus 250 S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~--i~~~~~Da~ 322 (495)
+......+.++++.+|||+|||+|..+..++.. ..+|+++|.|+..+..++++++..++.+ ++++..|+.
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~ 112 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLY 112 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTT
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchh
Confidence 445556677789999999999999999988875 5799999999999999999999999887 888888763
No 60
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.25 E-value=6.2e-11 Score=113.01 Aligned_cols=67 Identities=21% Similarity=0.305 Sum_probs=58.4
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcch
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDA 321 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da 321 (495)
.+...+++.+|.+|||++||+|..+..++.. .++|+++|.|+.++..++++++..|+ .++++...|+
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 149 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDF 149 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCT
T ss_pred HHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcCh
Confidence 4556678899999999999999999999987 57999999999999999999999988 5677777665
No 61
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.24 E-value=1.8e-11 Score=119.86 Aligned_cols=75 Identities=20% Similarity=0.242 Sum_probs=65.4
Q ss_pred ccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHH---hCCC-ceEEEEcchhH
Q 011036 248 LPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE---MGLK-CITTYKLDALK 323 (495)
Q Consensus 248 l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~---~gl~-~i~~~~~Da~~ 323 (495)
.-+++.+.++++.++.+|||+|||+|..+..+|.... ..+|+++|+++..+..++++++. +|+. .++++..|+..
T Consensus 23 ~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~ 101 (260)
T 2ozv_A 23 MDAMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTL 101 (260)
T ss_dssp CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTC
T ss_pred cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHH
Confidence 4577778888888999999999999999999998753 47999999999999999999998 8886 48899888754
No 62
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.23 E-value=1.3e-11 Score=118.37 Aligned_cols=77 Identities=17% Similarity=0.203 Sum_probs=64.5
Q ss_pred ccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhH
Q 011036 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (495)
Q Consensus 246 Q~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~ 323 (495)
|.....+...++...++.+|||+|||+|..|..+|... ..++|+++|+|+.++..+++++++.|+. +|+++..|+.+
T Consensus 56 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 56 DRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALE 133 (232)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 43344455556666788999999999999999999843 4689999999999999999999999986 79999999865
No 63
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.22 E-value=6.1e-11 Score=107.72 Aligned_cols=64 Identities=25% Similarity=0.267 Sum_probs=56.7
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhHH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKA 324 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~~ 324 (495)
..++.+|||+|||+|..+..++.. +.++|+++|.|+..+..++++++..|+. +++++..|+.+.
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 93 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA 93 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh
Confidence 567899999999999999998875 4579999999999999999999999985 699999998763
No 64
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.22 E-value=4.8e-11 Score=119.99 Aligned_cols=72 Identities=17% Similarity=0.252 Sum_probs=63.8
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.....+++++|++|||++||+|..+.++|......++|+++|.|+.++..+++++++.|+.++++...|+.+
T Consensus 66 ~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~ 137 (317)
T 1dl5_A 66 LFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY 137 (317)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG
T ss_pred HHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhh
Confidence 345567899999999999999999999999865468999999999999999999999999889998888744
No 65
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.22 E-value=6.2e-11 Score=113.11 Aligned_cols=73 Identities=21% Similarity=0.170 Sum_probs=62.1
Q ss_pred cHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchhHH
Q 011036 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKA 324 (495)
Q Consensus 249 ~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~~~ 324 (495)
...++..+....+|.+|||+|||+|+.+.++|.. .++|+|+|.|+.++..++++++.+|+ .+++++..|+...
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 139 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLL 139 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred HHHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHh
Confidence 3444555555568999999999999999999984 27999999999999999999999999 5799999998663
No 66
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.22 E-value=1.6e-11 Score=115.11 Aligned_cols=74 Identities=14% Similarity=0.076 Sum_probs=61.8
Q ss_pred HHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhHH
Q 011036 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKA 324 (495)
Q Consensus 251 ~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~~ 324 (495)
.+...++...++.+|||+|||+|..|.++|..+.+.++|+++|.|+.++..+++++++.|+. .++++..|+.+.
T Consensus 46 ~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 120 (210)
T 3c3p_A 46 RLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI 120 (210)
T ss_dssp HHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH
T ss_pred HHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH
Confidence 33333344446789999999999999999998765689999999999999999999999986 489999998663
No 67
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.20 E-value=4.6e-11 Score=110.52 Aligned_cols=54 Identities=17% Similarity=0.244 Sum_probs=44.6
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCC-CcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~-~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.++|.+|||+|||||+.|.+++..+++ .++|+|+|.|+.. ....+++...|+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~ 74 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGK 74 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccc
Confidence 578999999999999999999998764 6899999999832 24567888888754
No 68
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.19 E-value=1.8e-10 Score=104.67 Aligned_cols=64 Identities=20% Similarity=0.248 Sum_probs=56.3
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchhHH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKA 324 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~~~ 324 (495)
..++.+|||+|||+|..+..++. .+..+|+++|.|+..+..++++++..++ .+++++..|+.+.
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 106 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVS--RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRA 106 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred hcCCCCEEEeCCccCHHHHHHHH--cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHH
Confidence 35789999999999999998877 3457999999999999999999999998 4799999998764
No 69
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.19 E-value=5.8e-11 Score=111.10 Aligned_cols=71 Identities=18% Similarity=0.268 Sum_probs=62.8
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
.....++++++.+|||+|||+|..+..++...+..++|+++|.|+..+..++++++..++.+++++..|+.
T Consensus 28 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~ 98 (219)
T 3dh0_A 28 KVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEEN 98 (219)
T ss_dssp HHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTT
T ss_pred HHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccc
Confidence 34455678899999999999999999999987667899999999999999999999999988988888863
No 70
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.19 E-value=6e-11 Score=112.58 Aligned_cols=63 Identities=6% Similarity=0.092 Sum_probs=57.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.++.+|||+|||+|..+.++|... +...|+|+|+|..++..+++++++.|++++.++..|+..
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~ 99 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT 99 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH
Confidence 468899999999999999999875 457999999999999999999999999999999999865
No 71
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.19 E-value=7.4e-11 Score=114.92 Aligned_cols=76 Identities=14% Similarity=0.134 Sum_probs=64.5
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhHHH
Q 011036 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKAV 325 (495)
Q Consensus 250 S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~~~ 325 (495)
..+...++...++.+|||+|||+|..|..+|..+.+.++|+++|+|+.++..+++++++.|+. .|+++..|+.+.+
T Consensus 68 ~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l 144 (247)
T 1sui_A 68 GQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVL 144 (247)
T ss_dssp HHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred HHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHH
Confidence 334444445556789999999999999999998876789999999999999999999999984 6999999997753
No 72
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.18 E-value=2e-10 Score=108.14 Aligned_cols=63 Identities=11% Similarity=0.120 Sum_probs=56.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.++.+|||+|||+|..+.++|.... .+.|+|+|+|...+..++++++..|++++.++..|+..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~ 102 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD 102 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH
Confidence 4688999999999999999998753 57999999999999999999999999899999988743
No 73
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.18 E-value=2.7e-11 Score=121.43 Aligned_cols=63 Identities=8% Similarity=0.054 Sum_probs=52.3
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh--C--CCceEEEEcchhHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--G--LKCITTYKLDALKA 324 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~--g--l~~i~~~~~Da~~~ 324 (495)
.+.+|||+|||+|+.+..++... +.++|+++|+|+..+..+++++..+ + ...++++..|+.+.
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~ 156 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEY 156 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH
Confidence 35899999999999999998754 3579999999999999999988652 2 35689999998764
No 74
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.18 E-value=5.7e-11 Score=113.32 Aligned_cols=66 Identities=26% Similarity=0.333 Sum_probs=57.0
Q ss_pred hcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.+++++|++|||++||+|..+.+++...++.++|+|+|.|+..+..+.+++++. .+++++..|+..
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~ 137 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARH 137 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTC
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCC
Confidence 345789999999999999999999998766789999999999999999999876 668888877643
No 75
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.18 E-value=5.1e-11 Score=113.22 Aligned_cols=71 Identities=15% Similarity=0.166 Sum_probs=59.6
Q ss_pred HHHhhc--CCCCCCeEEEecCCCChHHHHHHHhcCC-----CcEEEEEeCChHHHHHHHHHHHHhC-----CCceEEEEc
Q 011036 252 VTAHAL--DPQKGERILDMCAAPGGKTTAIASLLRD-----EGEVVAVDRSHNKVMDIQKLAAEMG-----LKCITTYKL 319 (495)
Q Consensus 252 v~~~~L--dpqpGerVLDmCAaPGgKT~~iA~lm~~-----~G~ViA~D~s~~kv~~i~~~a~~~g-----l~~i~~~~~ 319 (495)
.....| .+++|++|||+|||+|..|.+++.+++. .++|+++|+++..+..+++++++.| ..+++++..
T Consensus 73 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 152 (227)
T 1r18_A 73 FALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG 152 (227)
T ss_dssp HHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred HHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC
Confidence 344555 5789999999999999999999997753 4699999999999999999998877 567888877
Q ss_pred chh
Q 011036 320 DAL 322 (495)
Q Consensus 320 Da~ 322 (495)
|+.
T Consensus 153 d~~ 155 (227)
T 1r18_A 153 DGR 155 (227)
T ss_dssp CGG
T ss_pred Ccc
Confidence 764
No 76
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.18 E-value=7.8e-11 Score=121.59 Aligned_cols=64 Identities=20% Similarity=0.298 Sum_probs=57.4
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~~ 323 (495)
+++|.+|||+|||+|+.+..+|.. ...+.|+|+|+|+..+..++++++..|+ .+|++...|+.+
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~-~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~ 279 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALR-RYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQ 279 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHT-TCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGG
T ss_pred cCCCCEEEEccCcCcHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhh
Confidence 788999999999999999998875 3346899999999999999999999999 579999999865
No 77
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.18 E-value=3.9e-11 Score=119.70 Aligned_cols=68 Identities=15% Similarity=0.144 Sum_probs=59.4
Q ss_pred HHhhcC-CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 011036 253 TAHALD-PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (495)
Q Consensus 253 ~~~~Ld-pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (495)
+...++ +++|.+|||+|||+|..+..++... ..+|+++|.|+.++..++++++..|+. +++++..|+.
T Consensus 108 l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 177 (312)
T 3vc1_A 108 LMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML 177 (312)
T ss_dssp HHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHhccCCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 445566 7899999999999999999999875 368999999999999999999999986 6888888863
No 78
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.17 E-value=1.2e-10 Score=111.37 Aligned_cols=64 Identities=19% Similarity=0.174 Sum_probs=58.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~ 324 (495)
.++.+|||+|||+|..+..+|... +...|+|+|+|..++..+++++++.|++++.++..|+...
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~ 96 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEV 96 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHH
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHH
Confidence 367899999999999999999865 4578999999999999999999999999999999998774
No 79
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.17 E-value=7.5e-11 Score=111.52 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=59.2
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcC----CCcEEEEEeCChHHHHHHHHHHHHhC-----CCceEEEEcchhH
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLR----DEGEVVAVDRSHNKVMDIQKLAAEMG-----LKCITTYKLDALK 323 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~----~~G~ViA~D~s~~kv~~i~~~a~~~g-----l~~i~~~~~Da~~ 323 (495)
.+++|.+|||+|||+|..+.+++.+++ +.++|+++|+++.++..+++++++.| ..+++++..|+.+
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 151 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQ 151 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGG
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHh
Confidence 578999999999999999999999876 56799999999999999999999998 5678888888754
No 80
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.17 E-value=1.7e-10 Score=119.55 Aligned_cols=73 Identities=16% Similarity=0.028 Sum_probs=61.1
Q ss_pred cHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC---ceEEEEcchh
Q 011036 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK---CITTYKLDAL 322 (495)
Q Consensus 249 ~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~---~i~~~~~Da~ 322 (495)
.+.+....+.+.++.+|||+|||+|..+..++... +..+|+++|.|+.++..++++++.+|+. .+.++..|++
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~ 285 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 285 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTT
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhh
Confidence 34456677888888999999999999999999864 3579999999999999999999999975 3666776653
No 81
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.17 E-value=2.4e-10 Score=107.00 Aligned_cols=70 Identities=17% Similarity=0.318 Sum_probs=62.5
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
.....+++++|.+|||++||+|..+..++...+..++|+++|.|+.++..++++++..|+.++++...|+
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~ 137 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDG 137 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCG
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc
Confidence 4455678899999999999999999999998766689999999999999999999999998888888876
No 82
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.16 E-value=7.2e-11 Score=113.42 Aligned_cols=65 Identities=22% Similarity=0.177 Sum_probs=58.2
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
+..++.+|||+|||+|..+..+|... ..++|+|+|.|+.++..++++++++|+++|+++..|+..
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 131 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAET 131 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHH
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHH
Confidence 44678999999999999999999854 457999999999999999999999999889999999865
No 83
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.16 E-value=1.7e-10 Score=116.43 Aligned_cols=68 Identities=16% Similarity=0.081 Sum_probs=58.2
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.++.+++|++|||++||||+.|..++.... .++|+++|+|+.+++.+++++++.|+.+|++...|+..
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~ 183 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV 183 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh
Confidence 357889999999999999998865543322 47999999999999999999999999889999999754
No 84
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.16 E-value=1.1e-10 Score=108.69 Aligned_cols=62 Identities=24% Similarity=0.166 Sum_probs=54.7
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
++++.+|||+|||+|..+..++.. +.++|+++|.|+.++..++++++..++.+++++..|+.
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 119 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLL 119 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTT
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccc
Confidence 568999999999999999998873 45699999999999999999999999887888887763
No 85
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.16 E-value=9.2e-11 Score=111.07 Aligned_cols=64 Identities=19% Similarity=0.287 Sum_probs=56.1
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
++++|++|||++||+|..+.++|...+..++|+++|.|+.++..++++++++ .+++++..|+.+
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~ 133 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATK 133 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTC
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCC
Confidence 3789999999999999999999998776789999999999999999988765 678888888643
No 86
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.16 E-value=6.8e-11 Score=114.11 Aligned_cols=52 Identities=21% Similarity=0.160 Sum_probs=44.2
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhc-CCCcEEEEEeCChHHHHHHHHHHHHh
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEM 309 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm-~~~G~ViA~D~s~~kv~~i~~~a~~~ 309 (495)
...++.+|||+|||+|..+..++..+ ....+|+|+|+|+..+..+++++...
T Consensus 48 ~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~ 100 (250)
T 1o9g_A 48 PGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALL 100 (250)
T ss_dssp SCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTT
T ss_pred ccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHh
Confidence 34567899999999999999999874 23468999999999999999888765
No 87
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.16 E-value=1.6e-10 Score=111.99 Aligned_cols=61 Identities=21% Similarity=0.222 Sum_probs=55.1
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcch
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDA 321 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da 321 (495)
+++|.+|||++||+|..+..++.. ..++|+++|.|+..+..++++++..|+.. ++++..|+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 105 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM 105 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh
Confidence 678999999999999999999986 45699999999999999999999999864 88888876
No 88
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.16 E-value=1.9e-10 Score=104.17 Aligned_cols=70 Identities=23% Similarity=0.301 Sum_probs=60.9
Q ss_pred HHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchhH
Q 011036 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (495)
Q Consensus 251 ~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~~ 323 (495)
......+++.++.+|||++||+|..+..++... ++|+++|.|+..+..++++++.+|+ .++.++..|+..
T Consensus 23 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 23 CLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE 93 (192)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH
Confidence 344555678899999999999999999988854 7999999999999999999999998 678888888755
No 89
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.15 E-value=2.2e-10 Score=109.73 Aligned_cols=62 Identities=15% Similarity=0.225 Sum_probs=56.0
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcch
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDA 321 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da 321 (495)
+..+|.+|||++||+|..+..++.... ++|+++|.|+..+..++++++..|+.. ++++..|+
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 105 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM 105 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh
Confidence 567899999999999999999999763 499999999999999999999999876 88888886
No 90
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.15 E-value=2.3e-10 Score=113.24 Aligned_cols=67 Identities=13% Similarity=0.087 Sum_probs=59.6
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcch
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDA 321 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da 321 (495)
....+++++|.+|||+|||+|..+..++...+ .+|+++|.|+..+..++++++..|+. ++++...|+
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 131 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGW 131 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCG
T ss_pred HHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCH
Confidence 45567889999999999999999999998764 68999999999999999999999987 688888876
No 91
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.15 E-value=4.3e-10 Score=101.26 Aligned_cols=69 Identities=23% Similarity=0.221 Sum_probs=60.8
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.....+++.++.+|||+|||+|..+..++. ...+|+++|.|+..+..++++++.+|+++++++..|+.+
T Consensus 26 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 94 (183)
T 2yxd_A 26 VSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED 94 (183)
T ss_dssp HHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc
Confidence 344556788899999999999999999887 457999999999999999999999999889999998765
No 92
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.15 E-value=9.1e-11 Score=113.19 Aligned_cols=80 Identities=18% Similarity=0.195 Sum_probs=63.3
Q ss_pred ccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEE
Q 011036 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (495)
Q Consensus 239 ~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~ 318 (495)
.+...+.|..........+.++++.+|||++||+|..+..++... ++|+++|.|+.++..++++++..|+.++.+..
T Consensus 15 ~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~ 91 (260)
T 1vl5_A 15 VTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQ 91 (260)
T ss_dssp --------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred ecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEE
Confidence 445556666666667777888899999999999999999888753 49999999999999999999999988888888
Q ss_pred cch
Q 011036 319 LDA 321 (495)
Q Consensus 319 ~Da 321 (495)
.|+
T Consensus 92 ~d~ 94 (260)
T 1vl5_A 92 GDA 94 (260)
T ss_dssp CCC
T ss_pred ecH
Confidence 875
No 93
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.14 E-value=7.5e-11 Score=112.89 Aligned_cols=74 Identities=19% Similarity=0.230 Sum_probs=65.4
Q ss_pred EccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 245 lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
.|+..+.-+...++++++.+|||++||+|..+..++... ++|+++|.|+.++..++++++..|+.++.++..|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~ 78 (239)
T 1xxl_A 5 HHHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA 78 (239)
T ss_dssp -CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT
T ss_pred ccCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc
Confidence 366677788899999999999999999999999888753 58999999999999999999999988888888875
No 94
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.14 E-value=1.3e-10 Score=113.47 Aligned_cols=64 Identities=25% Similarity=0.185 Sum_probs=58.7
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
+.++.+|||+|||+|..+..+|... +.++|+++|.|..++..++++++++|+++|+++..|+..
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~ 141 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEV 141 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHH
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHH
Confidence 4678999999999999999999875 458999999999999999999999999999999999865
No 95
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.13 E-value=1.6e-10 Score=109.29 Aligned_cols=71 Identities=20% Similarity=0.123 Sum_probs=61.8
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchhHH
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKA 324 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~~~ 324 (495)
..++...++.+|||+|||+|..|.++|..+.+.++|+++|.++.++..++++++..|+ ..|+++..|+...
T Consensus 62 ~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 133 (229)
T 2avd_A 62 ANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALET 133 (229)
T ss_dssp HHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred HHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHH
Confidence 3344456788999999999999999999877678999999999999999999999998 4799999998764
No 96
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.12 E-value=2.5e-10 Score=102.13 Aligned_cols=60 Identities=23% Similarity=0.150 Sum_probs=53.5
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~ 324 (495)
++.+|||+|||+|..+..++... . .|+++|.|+..+..++++++..++ +++++..|+.+.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~-~--~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~ 100 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG-W--EAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVF 100 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT-C--EEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC-C--eEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHH
Confidence 78999999999999999998852 2 399999999999999999999998 889999998764
No 97
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.12 E-value=1.7e-10 Score=113.64 Aligned_cols=75 Identities=12% Similarity=0.211 Sum_probs=60.8
Q ss_pred ccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 011036 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (495)
Q Consensus 246 Q~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (495)
+++-..++... ++||.+|||++||+|..|..||......| +|+|+|.|+.+++.++++++..+.. +|+++..|+.
T Consensus 57 ~~~i~~l~~~~--~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~ 133 (261)
T 4gek_A 57 ISMIGMLAERF--VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIR 133 (261)
T ss_dssp HHHHHHHHHHH--CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTT
T ss_pred HHHHHHHHHHh--CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccc
Confidence 34444455554 47899999999999999999999876544 9999999999999999999988865 5888888763
No 98
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.12 E-value=2.3e-10 Score=109.82 Aligned_cols=70 Identities=20% Similarity=0.225 Sum_probs=60.9
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhHH
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKA 324 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~~ 324 (495)
.++...++.+|||++||+|..|..+|..+.+.++|+++|.|+..+..+++++++.|+. .|+++..|+...
T Consensus 66 ~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 136 (232)
T 3cbg_A 66 LLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALAT 136 (232)
T ss_dssp HHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred HHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 3344456789999999999999999998876789999999999999999999999986 599999998764
No 99
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.12 E-value=1.4e-10 Score=102.94 Aligned_cols=120 Identities=15% Similarity=0.174 Sum_probs=85.7
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHHHHhhCCCCCCCCcc
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~~~~~~~~~~~~~~~ 338 (495)
++++.+|||+|||+|..+.+++..++..++|+++|.|+ .+. +.+++++..|+......
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----------~~~~~~~~~d~~~~~~~----------- 77 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----------IVGVDFLQGDFRDELVM----------- 77 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----------CTTEEEEESCTTSHHHH-----------
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----------cCcEEEEEcccccchhh-----------
Confidence 67899999999999999999999876668999999998 531 25677777776432000
Q ss_pred CCCCCccccccccccccccccccchhccCCCCCCcccccccccccccccccchhhhhhhhhhccCCCCCCccCCCCccCC
Q 011036 339 NSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKVSNEKGVERTYVSKADTRKNMRRMRNGPGRNQCLGGRAENS 418 (495)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~g~~~~~ 418 (495)
.++..
T Consensus 78 -----------------------------------------------------~~~~~---------------------- 82 (180)
T 1ej0_A 78 -----------------------------------------------------KALLE---------------------- 82 (180)
T ss_dssp -----------------------------------------------------HHHHH----------------------
T ss_pred -----------------------------------------------------hhhhc----------------------
Confidence 00000
Q ss_pred CCCCCCCccEEEEcCCCCCCCCcccchhhhhcHHHHHHhHHHHHHHHHHHHhcCCCCCEEEEEeCCC
Q 011036 419 KGFSPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCTI 485 (495)
Q Consensus 419 ~~f~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~a~~Qrrll~~A~~lLkpGG~LVYSTCTi 485 (495)
.+.+++||.|++|+|+...|.. . .+-......+.+++..+.++|||||.++.++...
T Consensus 83 -~~~~~~~D~i~~~~~~~~~~~~--------~-~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 83 -RVGDSKVQVVMSDMAPNMSGTP--------A-VDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp -HHTTCCEEEEEECCCCCCCSCH--------H-HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred -cCCCCceeEEEECCCccccCCC--------c-cchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 1234689999999998777642 1 1122234456899999999999999999877543
No 100
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.11 E-value=2.5e-10 Score=109.10 Aligned_cols=80 Identities=15% Similarity=0.206 Sum_probs=66.8
Q ss_pred cccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEc
Q 011036 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319 (495)
Q Consensus 240 ~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~ 319 (495)
.|....|..-.......+++++|.+|||++||+|..+..++...+ ++|+++|+++..+..++++++..|+.++++...
T Consensus 70 ~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 147 (235)
T 1jg1_A 70 AGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILG 147 (235)
T ss_dssp TTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC
Confidence 444444444444455667889999999999999999999999865 789999999999999999999999988888888
Q ss_pred ch
Q 011036 320 DA 321 (495)
Q Consensus 320 Da 321 (495)
|+
T Consensus 148 d~ 149 (235)
T 1jg1_A 148 DG 149 (235)
T ss_dssp CG
T ss_pred Cc
Confidence 86
No 101
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.10 E-value=3.3e-11 Score=120.92 Aligned_cols=74 Identities=16% Similarity=0.212 Sum_probs=58.5
Q ss_pred ccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 246 Q~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
+.......+..+++++|++|||+|||+|..|..++.. .++|+|+|+|+..+..++++++..|+.+++++..|++
T Consensus 27 ~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~ 100 (299)
T 2h1r_A 27 NPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAI 100 (299)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchh
Confidence 3333445566788899999999999999999998874 4699999999999999999999888888888777763
No 102
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.10 E-value=9.8e-11 Score=119.03 Aligned_cols=64 Identities=19% Similarity=0.063 Sum_probs=55.3
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCC----cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDE----GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~----G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
+++++.+|||.|||+|+.+..++..+... ..|+|+|+++..+..++.++...|+ .+.++..|++
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l 194 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGL 194 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTT
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCC
Confidence 67788999999999999999999877543 7999999999999999999998887 5677777753
No 103
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.09 E-value=1.7e-10 Score=110.46 Aligned_cols=67 Identities=22% Similarity=0.207 Sum_probs=58.6
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (495)
...+++.+|.+|||++||+|..+..+|... ..+|+++|.|+..+..++++++..|+. ++.+...|+.
T Consensus 29 ~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~ 96 (256)
T 1nkv_A 29 GRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA 96 (256)
T ss_dssp HHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT
T ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH
Confidence 445678899999999999999999999876 358999999999999999999999985 6888888763
No 104
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.09 E-value=4.6e-10 Score=107.55 Aligned_cols=73 Identities=22% Similarity=0.206 Sum_probs=63.8
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchhHH
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKA 324 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~~ 324 (495)
+...++...++.+|||++||+|..+..+|..+...++|+++|+++..+..+++++++.|+.+ |.++..|+...
T Consensus 51 ~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 124 (239)
T 2hnk_A 51 FLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALET 124 (239)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred HHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHH
Confidence 44445556788999999999999999999988667899999999999999999999999976 99999998764
No 105
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.09 E-value=2e-10 Score=105.55 Aligned_cols=52 Identities=31% Similarity=0.316 Sum_probs=41.7
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCC--------cEEEEEeCChHHHHHHHHHHHHhCCCceEEE-Ecch
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDE--------GEVVAVDRSHNKVMDIQKLAAEMGLKCITTY-KLDA 321 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~--------G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~-~~Da 321 (495)
+++|.+|||+|||||..+.+++..++.. ++|+|+|+|+.+ .+..++++ ..|.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~ 80 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADV 80 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccC
Confidence 5789999999999999999999987654 899999999832 23456666 5554
No 106
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.09 E-value=6.3e-10 Score=117.08 Aligned_cols=67 Identities=28% Similarity=0.283 Sum_probs=60.2
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
...+++.++++|||+|||+|..+..+|.. .++|+|+|.|+..+..++++++.+|+++++++..|+.+
T Consensus 279 ~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~ 345 (433)
T 1uwv_A 279 LEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEE 345 (433)
T ss_dssp HHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTS
T ss_pred HHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHH
Confidence 34567788999999999999999999985 47999999999999999999999999999999998754
No 107
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.07 E-value=1.1e-09 Score=115.30 Aligned_cols=64 Identities=16% Similarity=0.081 Sum_probs=56.2
Q ss_pred hcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
++++.++++|||+|||+|..+..+|.. ..+|+|+|.|+..+..++++++.+|++ ++++..|+.+
T Consensus 285 ~~~~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~ 348 (425)
T 2jjq_A 285 VSELVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDRE 348 (425)
T ss_dssp HHHHCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTT
T ss_pred hhccCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHH
Confidence 333678999999999999999999884 358999999999999999999999998 9999888744
No 108
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.07 E-value=3.3e-10 Score=108.16 Aligned_cols=62 Identities=11% Similarity=0.058 Sum_probs=53.0
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
++++.+|||+|||+|..+..++.. ...+|+++|.|+.++..++++++..+ .++.++..|+..
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~ 119 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWED 119 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTS--CEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHH
T ss_pred CCCCCeEEEEeccCCHHHHHHHhc--CCCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHH
Confidence 578999999999999999988763 23489999999999999999888777 568888888765
No 109
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.06 E-value=2.4e-10 Score=110.32 Aligned_cols=64 Identities=16% Similarity=0.225 Sum_probs=56.6
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh--------CCCceEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--------GLKCITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~--------gl~~i~~~~~Da~~ 323 (495)
++++.+|||+|||+|+.+.++|... ..+.|+|+|+|...+..++++++.+ |+.++.++..|+.+
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~ 118 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMK 118 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHH
Confidence 3568899999999999999999875 3579999999999999999999988 88889999998754
No 110
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.06 E-value=3.4e-10 Score=107.98 Aligned_cols=63 Identities=21% Similarity=0.266 Sum_probs=54.8
Q ss_pred cCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
+++++|.+|||++||+|..+.++|...+ .++|+|+|.|+.++..++++++.. +++.++..|+.
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~ 132 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER--ENIIPILGDAN 132 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTT
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCC
Confidence 4567899999999999999999999876 689999999999999999888765 67888888764
No 111
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.06 E-value=1.4e-09 Score=99.67 Aligned_cols=70 Identities=17% Similarity=0.189 Sum_probs=60.0
Q ss_pred HHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 251 ~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
......++..++.+|||++||+|..+..++.. ..+|+++|.|+..+..++++++..++++++++..|+..
T Consensus 22 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 91 (199)
T 2xvm_A 22 SEVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN 91 (199)
T ss_dssp HHHHHHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG
T ss_pred HHHHHHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh
Confidence 34556677778899999999999999999885 35999999999999999999999998788888888643
No 112
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.05 E-value=9e-10 Score=114.43 Aligned_cols=61 Identities=28% Similarity=0.358 Sum_probs=53.3
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
..+|.+|||+|||+|..+..++.. ..+|+++|.|...+..++++++.+++. ++++..|+.+
T Consensus 231 ~~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~~ 291 (381)
T 3dmg_A 231 GVRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSDVDE 291 (381)
T ss_dssp TTTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTT
T ss_pred CCCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchhh
Confidence 357899999999999999999985 359999999999999999999999876 7788877643
No 113
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.05 E-value=1.1e-09 Score=101.84 Aligned_cols=63 Identities=17% Similarity=0.149 Sum_probs=54.7
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
++.+|.+|||+|||+|..+..++.. +.++|+|+|.|+..+..++++++.+|+ .++++..|+.+
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~ 108 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSE 108 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGG
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHH
Confidence 5678999999999999999999875 345899999999999999999998888 78888887643
No 114
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.05 E-value=7.7e-10 Score=104.63 Aligned_cols=67 Identities=24% Similarity=0.250 Sum_probs=57.6
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.....+++.++.+|||+|||+|..+..++... ++|+++|.|+..+..++++++..+ +++++..|+.+
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~ 127 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTL 127 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGG
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCccc
Confidence 44566788899999999999999999999864 799999999999999999988776 78888887643
No 115
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.04 E-value=3.4e-10 Score=109.10 Aligned_cols=62 Identities=11% Similarity=0.036 Sum_probs=51.6
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
..+|.+|||++||.|.-+.+|+... -.+|+++|.|+..+..++++++..+. .++++..|+..
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~-~~~~~~~~a~~ 119 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWED 119 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHHH
T ss_pred ccCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCC-ceEEEeehHHh
Confidence 4689999999999999999888742 25899999999999999999887764 47778888755
No 116
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.04 E-value=1e-10 Score=118.02 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=29.2
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeC
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDR 294 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~ 294 (495)
.+||.+|||+|||||++|..+|+. ++|+|+|.
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~ 111 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKG 111 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEec
Confidence 468999999999999999999985 68999999
No 117
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.02 E-value=5.7e-10 Score=107.99 Aligned_cols=67 Identities=25% Similarity=0.302 Sum_probs=57.9
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcch
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDA 321 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da 321 (495)
....+++++|.+|||++||+|..+..++... ..+|+++|.|+..+..++++++..|+. .+.+...|+
T Consensus 53 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 120 (273)
T 3bus_A 53 MIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADA 120 (273)
T ss_dssp HHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred HHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcc
Confidence 3455678899999999999999999999865 379999999999999999999999886 588887775
No 118
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.01 E-value=9.5e-10 Score=106.78 Aligned_cols=68 Identities=16% Similarity=0.267 Sum_probs=59.3
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
......+|.+|||++||+|..+..++... +.++|+++|.|+..+..++++++..|+.+++++..|+..
T Consensus 31 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 98 (276)
T 3mgg_A 31 HDTVYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFS 98 (276)
T ss_dssp TTCCCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGG
T ss_pred hcccCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEccccc
Confidence 34456789999999999999999999874 357999999999999999999999999889999888743
No 119
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.01 E-value=4.7e-10 Score=103.87 Aligned_cols=66 Identities=21% Similarity=0.202 Sum_probs=56.4
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (495)
...++++++ +|||+|||+|..+..++.. ...+|+++|.|+..+..++++++..|+. +++++..|+.
T Consensus 37 ~~~~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 103 (219)
T 3dlc_A 37 INRFGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVH 103 (219)
T ss_dssp HHHHCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTT
T ss_pred HHhcCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHH
Confidence 344566777 9999999999999999986 4579999999999999999999999985 6888888763
No 120
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.00 E-value=1.1e-09 Score=102.68 Aligned_cols=68 Identities=15% Similarity=0.106 Sum_probs=56.0
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-----ceEEEEcch
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-----CITTYKLDA 321 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-----~i~~~~~Da 321 (495)
+...+...++.+|||++||+|..+..++... ...+|+++|.|+..+..++++++..++. +++++..|+
T Consensus 21 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (217)
T 3jwh_A 21 VVAALKQSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL 93 (217)
T ss_dssp HHHHHHHTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT
T ss_pred HHHHHHhcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc
Confidence 3445556788999999999999999998843 3469999999999999999999888776 577777775
No 121
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.99 E-value=9.1e-10 Score=108.20 Aligned_cols=63 Identities=17% Similarity=0.123 Sum_probs=55.6
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (495)
+..++.+|||++||+|..+..++...+ .+|+++|.|+..+..++++++..|+. .+++...|+.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 142 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL 142 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc
Confidence 778999999999999999999998752 58999999999999999999999985 5888887753
No 122
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.98 E-value=1.1e-09 Score=106.79 Aligned_cols=62 Identities=21% Similarity=0.253 Sum_probs=52.8
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchh
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~ 322 (495)
+.++.+|||+|||+|..+..++.. +.++|+++|.|+..+..+++++...++ .++.++..|+.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 124 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSY 124 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTT
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcc
Confidence 367899999999999999998875 346999999999999999999998877 45788877764
No 123
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.98 E-value=8e-10 Score=106.99 Aligned_cols=63 Identities=16% Similarity=0.220 Sum_probs=53.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHH------hCCCceEEEEcchhH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE------MGLKCITTYKLDALK 323 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~------~gl~~i~~~~~Da~~ 323 (495)
.++.+|||+|||.|..+.++|... +...|+|+|+|..++..++++++. .++.+|.++..|+.+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~ 113 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMK 113 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTT
T ss_pred CCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHH
Confidence 457799999999999999999864 457999999999999999988875 367789999988754
No 124
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.98 E-value=5.1e-10 Score=110.10 Aligned_cols=76 Identities=14% Similarity=0.123 Sum_probs=62.8
Q ss_pred ccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 246 Q~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
++..+.+...++...++.+|||++||+|..+..++....+..+|+++|.|+..+..++++++..+. +++++..|+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~ 82 (284)
T 3gu3_A 7 DDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDAT 82 (284)
T ss_dssp HHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTT
T ss_pred hHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchh
Confidence 344455555666788899999999999999999998776557999999999999999999887776 6888887763
No 125
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.98 E-value=2.4e-09 Score=106.52 Aligned_cols=67 Identities=15% Similarity=0.163 Sum_probs=57.2
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcch
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDA 321 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da 321 (495)
....+++++|.+|||++||+|..+..++... ..+|+++|.|+..+..++++++..|+. .+++...|+
T Consensus 82 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 149 (318)
T 2fk8_A 82 NLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW 149 (318)
T ss_dssp HHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG
T ss_pred HHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCh
Confidence 3455678899999999999999999999876 259999999999999999999988885 477777775
No 126
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.97 E-value=9.7e-10 Score=109.20 Aligned_cols=67 Identities=19% Similarity=0.102 Sum_probs=57.0
Q ss_pred cCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 011036 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~ 323 (495)
..+++|.+|||+|||+|..+.++|......++|+++|.|+..+..++++++..|+.. ++++..|+.+
T Consensus 114 ~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 181 (305)
T 3ocj_A 114 RHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK 181 (305)
T ss_dssp HHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG
T ss_pred hhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc
Confidence 346789999999999999998886444556799999999999999999999998865 8888888754
No 127
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.97 E-value=1.2e-09 Score=111.02 Aligned_cols=70 Identities=19% Similarity=0.185 Sum_probs=57.1
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 250 S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
+......+++.++.+|||+|||+|..+..++... +..+|+++|.|+.++..++++++.+++. ++++..|.
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~ 254 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNV 254 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECST
T ss_pred HHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEccc
Confidence 4555666777788899999999999999999864 4569999999999999999999988875 44455553
No 128
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.97 E-value=1e-09 Score=113.20 Aligned_cols=74 Identities=15% Similarity=0.043 Sum_probs=51.7
Q ss_pred ccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcc
Q 011036 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320 (495)
Q Consensus 241 G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~D 320 (495)
|.+|--..-....+..+++.++.+|||.|||+|+.+.++++.++....|+|+|+++..+..+ ..+.++..|
T Consensus 19 g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D 89 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILAD 89 (421)
T ss_dssp --CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESC
T ss_pred ceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCC
Confidence 44443333334455566666678999999999999999998775567999999999876433 346677776
Q ss_pred hhH
Q 011036 321 ALK 323 (495)
Q Consensus 321 a~~ 323 (495)
++.
T Consensus 90 ~~~ 92 (421)
T 2ih2_A 90 FLL 92 (421)
T ss_dssp GGG
T ss_pred hhh
Confidence 543
No 129
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.97 E-value=5e-10 Score=107.20 Aligned_cols=65 Identities=17% Similarity=0.160 Sum_probs=52.5
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
...+++++|.+|||++||+|..+.+++... ..+|+++|.|+..+..++++++.. .+++++..|+.
T Consensus 48 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~ 112 (266)
T 3ujc_A 48 LSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDIL 112 (266)
T ss_dssp TTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTT
T ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccc
Confidence 345577899999999999999999999866 369999999999998777765543 56777777753
No 130
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.96 E-value=1.7e-09 Score=100.30 Aligned_cols=61 Identities=20% Similarity=0.307 Sum_probs=54.9
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
++.+|||+|||+|..+..++... +.++|+++|.|+.++..++++++..|+.+++++..|+.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 125 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVE 125 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTT
T ss_pred CCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchh
Confidence 48899999999999999999876 35799999999999999999999999988888888764
No 131
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.96 E-value=2.3e-09 Score=99.07 Aligned_cols=58 Identities=19% Similarity=0.108 Sum_probs=46.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
.++.+|||++||+|..+..++.. + ..+|+++|.|+..+..++++++. ...+.++..|+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~ 98 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLG-G-FPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDV 98 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHT-T-CCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCT
T ss_pred CCCCeEEEECCCCcHHHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcch
Confidence 67899999999999999998875 2 23899999999999888887653 34566766665
No 132
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.95 E-value=5.7e-10 Score=117.63 Aligned_cols=83 Identities=18% Similarity=0.182 Sum_probs=62.7
Q ss_pred cccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcC------------CCcEEEEEeCChHHHHHHHHHHH
Q 011036 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR------------DEGEVVAVDRSHNKVMDIQKLAA 307 (495)
Q Consensus 240 ~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~------------~~G~ViA~D~s~~kv~~i~~~a~ 307 (495)
.|.+|--..-+...+.+++|++|.+|||.|||+|+.+..++..+. ....++|+|+++..+..++.++.
T Consensus 150 ~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 455443333344566778999999999999999999999988653 23579999999999999998888
Q ss_pred HhCCC--ceEEEEcchh
Q 011036 308 EMGLK--CITTYKLDAL 322 (495)
Q Consensus 308 ~~gl~--~i~~~~~Da~ 322 (495)
..|+. .+.+...|++
T Consensus 230 l~g~~~~~~~i~~gD~l 246 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSL 246 (445)
T ss_dssp HTTCCSSCCSEEECCTT
T ss_pred HhCCCcCCCCEeeCCCC
Confidence 88874 4555666653
No 133
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.95 E-value=2.5e-09 Score=104.25 Aligned_cols=61 Identities=16% Similarity=0.175 Sum_probs=53.5
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.++|.+|||++||+|..+..++.+ + . +|+|+|+|+..+..++++++.+|+. ++++..|+.+
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g-~-~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~ 178 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-G-G-KALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEA 178 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T-C-EEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-C-C-eEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhh
Confidence 468999999999999999888774 2 2 9999999999999999999999988 8888888754
No 134
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.95 E-value=8.2e-09 Score=100.18 Aligned_cols=64 Identities=16% Similarity=0.103 Sum_probs=57.3
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~ 323 (495)
+++|++|||+|||+|..+..+|.+ +..++|+|+|+++..+..+++|++++|+.. |++...|.+.
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~ 77 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA 77 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh
Confidence 457999999999999999998874 456799999999999999999999999974 9999998765
No 135
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.95 E-value=1.7e-09 Score=102.29 Aligned_cols=61 Identities=16% Similarity=0.060 Sum_probs=51.6
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
+.++.+|||+|||+|..+..++... +..+|+++|.|+..+..++++++..+ ++.++..|+.
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~ 102 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYS 102 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTT
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchh
Confidence 6788999999999999999999976 35799999999999998888876554 6777777763
No 136
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.94 E-value=3.4e-09 Score=103.56 Aligned_cols=66 Identities=20% Similarity=0.124 Sum_probs=56.0
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcch
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDA 321 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da 321 (495)
...+++++|.+|||++||+|..+.+++...+ .+|+++|.|+..+..+++++++.|+. .+.+...|+
T Consensus 57 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 123 (287)
T 1kpg_A 57 LGKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW 123 (287)
T ss_dssp HTTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG
T ss_pred HHHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECCh
Confidence 4456778999999999999999999996553 49999999999999999999988874 577777765
No 137
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.94 E-value=1.4e-09 Score=102.18 Aligned_cols=69 Identities=23% Similarity=0.219 Sum_probs=54.9
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHH----HhCCCceEEEEcchhH
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAA----EMGLKCITTYKLDALK 323 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~----~~gl~~i~~~~~Da~~ 323 (495)
...+++++|.+|||+|||+|..+..+|... +.++|+++|.|+.++..+.+.++ ..+++++.++..|+..
T Consensus 20 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 92 (218)
T 3mq2_A 20 FEQLRSQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER 92 (218)
T ss_dssp HHHHHTTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT
T ss_pred HHHhhccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh
Confidence 345567899999999999999999999964 45899999999998887655553 3567778888887643
No 138
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.94 E-value=2e-09 Score=100.87 Aligned_cols=67 Identities=12% Similarity=0.128 Sum_probs=54.8
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-----ceEEEEcch
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-----CITTYKLDA 321 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-----~i~~~~~Da 321 (495)
...+...++.+|||++||+|..+..++... ...+|+++|.|+..+..++++++..++. +++++..|+
T Consensus 22 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (219)
T 3jwg_A 22 VAVLKSVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL 93 (219)
T ss_dssp HHHHHHTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS
T ss_pred HHHHhhcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc
Confidence 344555778999999999999999998753 3469999999999999999998877765 577777764
No 139
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.93 E-value=4.2e-09 Score=98.55 Aligned_cols=58 Identities=24% Similarity=0.257 Sum_probs=49.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
.++.+|||+|||+|..+..++... .+|+++|.|+..+..++++++..+ .+++++..|+
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~ 94 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDA 94 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCT
T ss_pred CCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC-CCceEEECch
Confidence 358899999999999999888752 289999999999999999998877 5677777775
No 140
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.92 E-value=4.2e-09 Score=103.06 Aligned_cols=65 Identities=18% Similarity=0.190 Sum_probs=55.8
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
..++..++.+|||+|||+|..+..++.. ..+|+++|.|+..+..++++++..|+ +++++..|+..
T Consensus 114 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~ 178 (286)
T 3m70_A 114 DAAKIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINA 178 (286)
T ss_dssp HHHHHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGG
T ss_pred HHhhccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEecccc
Confidence 3444457999999999999999999885 35999999999999999999999998 78888888644
No 141
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.92 E-value=6.6e-09 Score=95.98 Aligned_cols=58 Identities=34% Similarity=0.407 Sum_probs=49.4
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
..++ +|||++||+|..+..++.. ..+|+++|.|+.++..++++++..+. ++.++..|+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~ 85 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNL 85 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBT
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcCh
Confidence 3567 9999999999999888874 35999999999999999999988877 677777765
No 142
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.91 E-value=1.7e-09 Score=106.81 Aligned_cols=65 Identities=14% Similarity=0.159 Sum_probs=56.3
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh--CCCceEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GLKCITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~--gl~~i~~~~~Da~~ 323 (495)
.+++.+|||++||+|..+..++..+....+|+++|.|+..+..++++++.. +..+++++..|+..
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDD 100 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHh
Confidence 368999999999999999999987656689999999999999999999987 34678888888743
No 143
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.91 E-value=1.5e-09 Score=111.89 Aligned_cols=65 Identities=20% Similarity=0.247 Sum_probs=56.6
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh-----C-C--CceEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-----G-L--KCITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~-----g-l--~~i~~~~~Da~~ 323 (495)
+.+|.+|||+|||+|..+..++...+..++|+++|.|+..+..++++++++ | + .+++++..|+..
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~ 153 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIEN 153 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHH
Confidence 568999999999999999999998877789999999999999999988776 4 3 578888888744
No 144
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.91 E-value=3.7e-09 Score=98.15 Aligned_cols=61 Identities=18% Similarity=0.245 Sum_probs=49.8
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
..+....++.+|||++||+|..+..++.. ..+|+++|.|+..+..+++ .+..++.++..|+
T Consensus 39 ~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~ 99 (218)
T 3ou2_A 39 ERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDL 99 (218)
T ss_dssp HHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCT
T ss_pred HHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCCCCeEEEeccc
Confidence 33334678889999999999999999886 3699999999998876665 6777788888775
No 145
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.91 E-value=2.6e-09 Score=107.77 Aligned_cols=69 Identities=17% Similarity=0.273 Sum_probs=61.8
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
+...|++++|.+|||+|||+|+.|.+|+.... .++|+|+|+|+.++..++++++.+| .++++++.|+..
T Consensus 18 ~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~ 86 (301)
T 1m6y_A 18 VIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYRE 86 (301)
T ss_dssp HHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGG
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHH
Confidence 45677899999999999999999999999875 5899999999999999999999888 789999998754
No 146
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.90 E-value=4e-09 Score=98.84 Aligned_cols=59 Identities=22% Similarity=0.210 Sum_probs=48.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-----ceEEEEcch
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-----CITTYKLDA 321 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-----~i~~~~~Da 321 (495)
+++.+|||++||+|..+..++.. ..+|+++|.|+..+..++++++..++. .+.++..|+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 92 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA 92 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc
Confidence 47899999999999999999885 359999999999999999888877763 355555554
No 147
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.90 E-value=2e-09 Score=107.16 Aligned_cols=69 Identities=16% Similarity=0.169 Sum_probs=59.0
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchhH
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~~ 323 (495)
..+..++++++++|||+|||+|..|..++.. .++|+|+|+|+..+..++++++..++ .+++++..|+++
T Consensus 19 ~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~ 88 (285)
T 1zq9_A 19 SIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLK 88 (285)
T ss_dssp HHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTT
T ss_pred HHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceec
Confidence 4456678899999999999999999999986 35899999999999999998887776 578888888754
No 148
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.90 E-value=5.6e-09 Score=97.49 Aligned_cols=67 Identities=15% Similarity=0.076 Sum_probs=54.6
Q ss_pred HHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 251 ~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
.+....+...++.+|||++||+|..+..++.. ..+|+++|.|+..+..++++++..+ +++++..|+.
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~ 107 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWS--HISWAATDIL 107 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTT
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCC--CeEEEEcchh
Confidence 34555677788999999999999999998875 2589999999999998888876543 6888887763
No 149
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.89 E-value=9.4e-10 Score=103.39 Aligned_cols=48 Identities=17% Similarity=0.104 Sum_probs=41.4
Q ss_pred cCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHH
Q 011036 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAA 307 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~ 307 (495)
+++.+|.+|||++||+|.-+..+|.. ..+|+|+|.|+.++..+++.++
T Consensus 18 l~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~ 65 (203)
T 1pjz_A 18 LNVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERG 65 (203)
T ss_dssp HCCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHC
T ss_pred cccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHcc
Confidence 45678999999999999999999985 2489999999999998877654
No 150
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.89 E-value=5.9e-09 Score=100.93 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=58.7
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChH------HHHHHHHHHHHhCC-CceEEEEcc
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN------KVMDIQKLAAEMGL-KCITTYKLD 320 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~------kv~~i~~~a~~~gl-~~i~~~~~D 320 (495)
.....+++++|.+|||++||+|..+.+++...+..++|+++|.|+. .+..++++++..++ .+|+++..|
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 3445567889999999999999999999997766689999999997 89999999988887 467777776
No 151
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.88 E-value=3.3e-09 Score=101.20 Aligned_cols=64 Identities=16% Similarity=0.066 Sum_probs=51.6
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
..+...++.+|||++||+|..+..++... ..+|+++|.|+..+..++++++.. .++.++..|+.
T Consensus 87 ~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~ 150 (254)
T 1xtp_A 87 ASLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASME 150 (254)
T ss_dssp HTSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGG
T ss_pred HhhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHH
Confidence 34566789999999999999999988864 468999999999998888876644 56777777753
No 152
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.88 E-value=2.1e-09 Score=99.57 Aligned_cols=61 Identities=15% Similarity=0.114 Sum_probs=47.4
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
...++.+|||++||+|..+..++.. ...+|+++|.|+.++..++++++..+. ++.++..|+
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~ 80 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENNF-KLNISKGDI 80 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHTC-CCCEEECCT
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEECch
Confidence 3457899999999999886555433 235999999999999999999887763 466666664
No 153
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.88 E-value=1.5e-08 Score=97.47 Aligned_cols=61 Identities=13% Similarity=0.012 Sum_probs=54.2
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchh
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDAL 322 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~ 322 (495)
++.+|||+|||+|..+..+|.... .++|+|+|+|+.++..++++++.+|+.+ ++++..|+.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 126 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQK 126 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchh
Confidence 578999999999999999988653 3799999999999999999999999875 899988863
No 154
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.87 E-value=3.8e-09 Score=107.67 Aligned_cols=65 Identities=20% Similarity=0.128 Sum_probs=54.9
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchh
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~ 322 (495)
..+...+|.+|||++||+|..+..+|.. +..+|+|+|.|+ .+..++++++.+|+ ..|+++..|+.
T Consensus 58 ~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~ 123 (340)
T 2fyt_A 58 QNPHIFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIE 123 (340)
T ss_dssp HCGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred hhhhhcCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHH
Confidence 3455678999999999999999888875 346999999996 89999999999998 57888888764
No 155
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.87 E-value=6.1e-09 Score=103.28 Aligned_cols=50 Identities=18% Similarity=0.205 Sum_probs=41.2
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl 311 (495)
+|.+|||++||+|..|..||..++. .+|+++|+|+..+..++++++..+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~-~~v~gvDis~~~i~~A~~~~~~~~~ 95 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGP-SRMVGLDIDSRLIHSARQNIRHYLS 95 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCC-SEEEEEESCHHHHHHHHHTC-----
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhhh
Confidence 6889999999999999999998754 5999999999999999988776654
No 156
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.87 E-value=3.9e-09 Score=107.86 Aligned_cols=62 Identities=18% Similarity=0.101 Sum_probs=53.6
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~ 323 (495)
..+|.+|||++||+|..+..+|.. +..+|+|+|.| ..+..++++++..|+.. |+++..|+.+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~ 126 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEE 126 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred cCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHH
Confidence 457899999999999999998885 45699999999 59999999999999876 8888888643
No 157
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.87 E-value=1.9e-08 Score=98.77 Aligned_cols=65 Identities=20% Similarity=0.099 Sum_probs=57.8
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~ 323 (495)
-+.+|++|||+|||+|-.+..+|.. +..++|+|+|+++..+..++++++.+|+.+ |++...|.+.
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~ 83 (244)
T 3gnl_A 18 YITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLA 83 (244)
T ss_dssp TCCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred hCCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhh
Confidence 3467999999999999999998875 446799999999999999999999999975 9999999766
No 158
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.87 E-value=7.9e-10 Score=106.91 Aligned_cols=64 Identities=17% Similarity=0.147 Sum_probs=49.6
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHh---cCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASL---LRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~l---m~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
..+++..++.+|||+|||+|+.|..+|.+ +.+.++|+++|+|+.++..++ .++ .+|+++..|+.
T Consensus 74 ~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~-~~v~~~~gD~~ 140 (236)
T 2bm8_A 74 HDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDM-ENITLHQGDCS 140 (236)
T ss_dssp HHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGC-TTEEEEECCSS
T ss_pred HHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccC-CceEEEECcch
Confidence 34445556789999999999999999998 566799999999998876544 222 46888887764
No 159
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.87 E-value=2.3e-08 Score=97.45 Aligned_cols=65 Identities=18% Similarity=0.132 Sum_probs=57.9
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~ 323 (495)
-+++|++|||+|||+|-.+..+|.. +..++|+|+|+++..+..++++++++|+.. |++...|.+.
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~ 83 (230)
T 3lec_A 18 YVPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLS 83 (230)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG
T ss_pred hCCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhh
Confidence 3467999999999999999998875 456799999999999999999999999975 9999999866
No 160
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.86 E-value=2.1e-09 Score=108.07 Aligned_cols=51 Identities=20% Similarity=0.190 Sum_probs=40.5
Q ss_pred cCCCCCCeEEEecC------CCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEE-EEcchh
Q 011036 257 LDPQKGERILDMCA------APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT-YKLDAL 322 (495)
Q Consensus 257 LdpqpGerVLDmCA------aPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~-~~~Da~ 322 (495)
+.+++|++|||+|| |||+ ..++.+++..++|+|+|+|+. +.++++ ++.|+.
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~ 116 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCA 116 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGG
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccc
Confidence 57889999999999 7788 566777776799999999986 134666 777764
No 161
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.86 E-value=3.6e-09 Score=103.46 Aligned_cols=60 Identities=18% Similarity=0.206 Sum_probs=52.4
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchhH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~~ 323 (495)
++.+|||++||+|..+..++.. ..+|+++|.|+..+..++++++..|+ .+++++..|+..
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 128 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQD 128 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGG
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHH
Confidence 3789999999999999999885 46999999999999999999999998 578999888754
No 162
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.86 E-value=2.7e-09 Score=101.86 Aligned_cols=61 Identities=20% Similarity=0.113 Sum_probs=50.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
.++.+|||++||+|..+..++... ..+|+++|.|+..+..+++++...+..++.++..|+.
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~ 138 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ 138 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChh
Confidence 468999999999999998877753 4599999999999999998887766556777777753
No 163
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.85 E-value=7.5e-09 Score=103.93 Aligned_cols=51 Identities=10% Similarity=0.087 Sum_probs=41.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
.+|.+|||+|||+|+-+..++. .+.++|+|+|.|+.++..+++.++..+..
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~--~~~~~v~GiD~S~~~l~~A~~~~~~~~~~ 97 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFY--GEIALLVATDPDADAIARGNERYNKLNSG 97 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHHCC-
T ss_pred CCCCeEEEEecCCcHhHHHHHh--cCCCeEEEEECCHHHHHHHHHHHHhcccc
Confidence 3589999999999987766554 23468999999999999999999887753
No 164
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.85 E-value=8.3e-09 Score=102.33 Aligned_cols=62 Identities=23% Similarity=0.320 Sum_probs=50.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh--CC---------CceEEEEcchhHH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL---------KCITTYKLDALKA 324 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~--gl---------~~i~~~~~Da~~~ 324 (495)
..+.+|||+|||.|+.+..++.. +.++|+++|+++..+..+++++ ++ ++ ..++++..|+.+.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~ 146 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEF 146 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHH
Confidence 34689999999999999998886 4579999999999999998887 44 33 4588888887664
No 165
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.85 E-value=4.6e-09 Score=100.62 Aligned_cols=64 Identities=13% Similarity=0.107 Sum_probs=50.9
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
...+...++.+|||++||+|..+..++.. +..+|+++|.|+..+..++++++ ..++.++..|+.
T Consensus 37 ~~~~~~~~~~~vLD~GcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~ 100 (253)
T 3g5l_A 37 KKMLPDFNQKTVLDLGCGFGWHCIYAAEH--GAKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIE 100 (253)
T ss_dssp HTTCCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGG
T ss_pred HHhhhccCCCEEEEECCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchh
Confidence 34566678999999999999999999885 22389999999999987776654 456788887763
No 166
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.84 E-value=2.4e-09 Score=116.10 Aligned_cols=83 Identities=13% Similarity=0.074 Sum_probs=61.2
Q ss_pred cccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCC-----------------cEEEEEeCChHHHHHH
Q 011036 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE-----------------GEVVAVDRSHNKVMDI 302 (495)
Q Consensus 240 ~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~-----------------G~ViA~D~s~~kv~~i 302 (495)
.|.+|--..-+.+.+.+++|++|.+|||.|||+|+....++..+... ..++++|++...+..+
T Consensus 148 ~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp --CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 35444333334456678899999999999999999999998876432 3799999999999988
Q ss_pred HHHHHHhCCCc-----eEEEEcchh
Q 011036 303 QKLAAEMGLKC-----ITTYKLDAL 322 (495)
Q Consensus 303 ~~~a~~~gl~~-----i~~~~~Da~ 322 (495)
+.++...|+.. +.++..|++
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL 252 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTL 252 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTT
T ss_pred HHHHHHhCCCccccccCCeEeCCCc
Confidence 88887777654 455555543
No 167
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.82 E-value=2.1e-09 Score=105.17 Aligned_cols=68 Identities=16% Similarity=0.061 Sum_probs=51.4
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC----CceEEEEcchhH
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL----KCITTYKLDALK 323 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl----~~i~~~~~Da~~ 323 (495)
....+...++.+|||+|||+|..+..++.. ..+|+++|.|+..+..+++++...+. .++.+...|+..
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 49 LLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp HHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred HHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 344455568899999999999999999885 24999999999999999888765443 235555555433
No 168
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.82 E-value=7.7e-09 Score=102.13 Aligned_cols=64 Identities=25% Similarity=0.219 Sum_probs=52.8
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC---CceEEEEcchh
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL---KCITTYKLDAL 322 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl---~~i~~~~~Da~ 322 (495)
..+.++++ +|||++||+|..+..++.. ..+|+++|.|+..+..+++++...++ .+++++..|+.
T Consensus 77 ~~~~~~~~-~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 77 TRTGPVSG-PVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHCCCCS-CEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT
T ss_pred HhhCCCCC-cEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh
Confidence 33445555 9999999999999999885 35899999999999999999988775 56888888764
No 169
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.81 E-value=6.7e-09 Score=99.30 Aligned_cols=70 Identities=13% Similarity=0.120 Sum_probs=54.0
Q ss_pred ccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 246 Q~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
|..+..-....+.+.++.+|||++||+|..+..++... +.++|+++|.|+.++..++++ ..++.++..|+
T Consensus 18 ~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~ 87 (259)
T 2p35_A 18 RTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADR-----LPNTNFGKADL 87 (259)
T ss_dssp GGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHH-----STTSEEEECCT
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh-----CCCcEEEECCh
Confidence 33344444556677889999999999999999999876 347899999999998877665 34567777665
No 170
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.81 E-value=9.9e-09 Score=105.94 Aligned_cols=65 Identities=15% Similarity=0.124 Sum_probs=55.9
Q ss_pred hcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 011036 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~ 323 (495)
.+...+|.+|||++||+|..+..+|.. +..+|+|+|.| .++..++++++.+|+.. |+++..|+.+
T Consensus 58 ~~~~~~~~~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 123 (376)
T 3r0q_C 58 NKHHFEGKTVLDVGTGSGILAIWSAQA--GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVED 123 (376)
T ss_dssp TTTTTTTCEEEEESCTTTHHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred ccccCCCCEEEEeccCcCHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhh
Confidence 345678999999999999999998885 34599999999 99999999999999865 8888888744
No 171
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.80 E-value=6.1e-09 Score=97.30 Aligned_cols=59 Identities=14% Similarity=0.084 Sum_probs=45.6
Q ss_pred hcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
.+.++++.+|||++||+|..+..++.. ..+|+++|.|+..+..+++++. .++.++..|+
T Consensus 40 ~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~ 98 (220)
T 3hnr_A 40 DVVNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDF 98 (220)
T ss_dssp HHHHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCS
T ss_pred HhhccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCCh
Confidence 344568999999999999999999885 4699999999999887766544 3455555554
No 172
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.80 E-value=7e-09 Score=104.99 Aligned_cols=63 Identities=22% Similarity=0.158 Sum_probs=52.5
Q ss_pred cCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 011036 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (495)
+...+|.+|||++||+|..+..+|.. +..+|+|+|.| ..+..++++++..|+. .|+++..|+.
T Consensus 34 ~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~ 97 (328)
T 1g6q_1 34 KDLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLE 97 (328)
T ss_dssp HHHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred HhhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchh
Confidence 34457899999999999999888874 44699999999 5899999999999985 4888887763
No 173
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.79 E-value=2.3e-08 Score=94.39 Aligned_cols=58 Identities=28% Similarity=0.290 Sum_probs=49.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
.++.+|||++||+|..+..++.. .+|+++|.|+.++..++++++..+ .+++++..|+.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~ 89 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMR 89 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGG
T ss_pred CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChh
Confidence 45789999999999998887764 789999999999999999998877 45777777753
No 174
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.79 E-value=7.5e-09 Score=97.81 Aligned_cols=66 Identities=18% Similarity=0.102 Sum_probs=50.6
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
.....++..++.+|||+|||+|..+..++.. +.++|+++|.|+..+..+++++.. .++.+...|+.
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~ 99 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD---TGITYERADLD 99 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGG
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChh
Confidence 3456677778999999999999999998885 334899999999998777665432 34667776653
No 175
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.79 E-value=7e-09 Score=99.20 Aligned_cols=61 Identities=10% Similarity=0.042 Sum_probs=50.5
Q ss_pred cCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
..+.++.+|||++||+|..+..++.. .++|+++|.|+..+..+++++ ..+..++.+...|+
T Consensus 35 ~~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~ 95 (263)
T 2yqz_A 35 HPKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADA 95 (263)
T ss_dssp CCSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCT
T ss_pred cCCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEccc
Confidence 35678999999999999999998874 369999999999999888877 33456677777775
No 176
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.79 E-value=1.3e-08 Score=103.89 Aligned_cols=65 Identities=17% Similarity=0.095 Sum_probs=54.4
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchh
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~ 322 (495)
..+...+|.+|||++||+|..+..+|.. +.++|+|+|.|+ .+..++++++..|+ .+|+++..|+.
T Consensus 44 ~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~ 109 (348)
T 2y1w_A 44 QNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVE 109 (348)
T ss_dssp HTGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred hccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchh
Confidence 4455678999999999999999988874 456999999996 78889999999998 57888888763
No 177
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.77 E-value=7.8e-09 Score=103.74 Aligned_cols=62 Identities=8% Similarity=0.066 Sum_probs=49.2
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhC-----CCceEEEEcchhH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG-----LKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~g-----l~~i~~~~~Da~~ 323 (495)
.+.+|||+|||.|+.+..++.. .+..+|+++|+|+..+..+++++..++ -.+++++..|+.+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~-~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~ 149 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVN 149 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTC-TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC
T ss_pred CCCEEEEEeCChhHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHH
Confidence 4579999999999999998875 345799999999999999999887653 2356666666543
No 178
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.77 E-value=1.6e-08 Score=93.64 Aligned_cols=58 Identities=14% Similarity=0.117 Sum_probs=48.3
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
++.+|.+|||+|||+|..+..++.. +..+|+++|.|+..+..++++++ +++++..|+.
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~ 105 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVS 105 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGG
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHH
Confidence 5668999999999999999999875 45689999999999988887765 5677777753
No 179
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.77 E-value=8e-08 Score=91.72 Aligned_cols=63 Identities=25% Similarity=0.238 Sum_probs=53.3
Q ss_pred cCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
+...++.+|||+|||+|..+..++.. ..+|+++|.|+..+..++++++..++ .+.++..|+..
T Consensus 37 ~~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~ 99 (252)
T 1wzn_A 37 DAKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLE 99 (252)
T ss_dssp TCSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGG
T ss_pred hcccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhh
Confidence 34567889999999999999999884 35899999999999999999998876 57788877643
No 180
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.76 E-value=6.3e-09 Score=95.04 Aligned_cols=54 Identities=19% Similarity=0.156 Sum_probs=41.8
Q ss_pred hhcCC--CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 255 HALDP--QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 255 ~~Ldp--qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
..++. .++.+|||+|||+|..+..++... +|+|+|+|+.++.. ..+++++..|+
T Consensus 15 ~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~---------~~~~~~~~~d~ 70 (170)
T 3q87_B 15 DALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES---------HRGGNLVRADL 70 (170)
T ss_dssp HHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT---------CSSSCEEECST
T ss_pred HHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc---------ccCCeEEECCh
Confidence 33554 678899999999999998887742 99999999988764 34566666665
No 181
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.76 E-value=4.4e-08 Score=100.02 Aligned_cols=65 Identities=11% Similarity=0.100 Sum_probs=54.0
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh--CC--CceEEEEcchhHH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL--KCITTYKLDALKA 324 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~--gl--~~i~~~~~Da~~~ 324 (495)
...+.+|||+|||.|+.+..++... +..+|+++|+|+..+..++++++++ |+ ..++++..|+.+.
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~ 186 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAF 186 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHH
Confidence 3456899999999999999988753 3579999999999999999998765 44 4699999998764
No 182
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.75 E-value=3e-08 Score=104.35 Aligned_cols=69 Identities=12% Similarity=0.085 Sum_probs=56.6
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHH-------HHhCC--CceEEEEcchhH
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA-------AEMGL--KCITTYKLDALK 323 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a-------~~~gl--~~i~~~~~Da~~ 323 (495)
...+++++|++|||+|||.|..+..+|... +..+|+|+|+|+..+..+++++ +.+|+ ..|+++++|++.
T Consensus 166 l~~l~l~~gd~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~ 243 (438)
T 3uwp_A 166 IDEIKMTDDDLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS 243 (438)
T ss_dssp HHHHCCCTTCEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTS
T ss_pred HHhcCCCCCCEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccC
Confidence 345688999999999999999999998765 3458999999998887777654 45676 579999999865
No 183
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.75 E-value=3.3e-09 Score=104.89 Aligned_cols=35 Identities=23% Similarity=0.200 Sum_probs=31.5
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCCh
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~ 296 (495)
.+++|.+|||+|||||+.|..+|.. ++|+|+|.++
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~ 105 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT 105 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch
Confidence 3578999999999999999998885 7899999997
No 184
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.75 E-value=1e-08 Score=100.34 Aligned_cols=47 Identities=19% Similarity=0.092 Sum_probs=39.5
Q ss_pred cCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHH
Q 011036 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a 306 (495)
+.+++|.+|||++||+|.-+..||.. ..+|+|+|.|+..+..+++.+
T Consensus 64 ~~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~ 110 (252)
T 2gb4_A 64 LKGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQ 110 (252)
T ss_dssp HTTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHT
T ss_pred ccCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhc
Confidence 34568899999999999999999984 248999999999998776544
No 185
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.74 E-value=4.8e-08 Score=88.42 Aligned_cols=55 Identities=15% Similarity=0.057 Sum_probs=44.3
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
+.++.+|||++||+|..+..++.. ..+|+++|.|+..+..+++++ .++.++..|+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~ 98 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDL 98 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCT
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEccc
Confidence 457899999999999999999885 368999999999988777654 3466666664
No 186
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.74 E-value=2.2e-08 Score=94.35 Aligned_cols=58 Identities=19% Similarity=0.111 Sum_probs=49.8
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
++.+|||++||+|..+..++.. ..+|+++|.|+..+..+++++...++ ++.++..|+.
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~ 94 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDIS 94 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccc
Confidence 7889999999999999988875 35899999999999999999988776 5777777653
No 187
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.73 E-value=5.3e-09 Score=104.09 Aligned_cols=35 Identities=17% Similarity=0.109 Sum_probs=31.5
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCCh
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~ 296 (495)
.+++|.+|||+|||||+.|..+|.. ++|+|+|.|+
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~ 113 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT 113 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch
Confidence 3578999999999999999998885 7899999997
No 188
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.73 E-value=8.3e-09 Score=99.10 Aligned_cols=63 Identities=16% Similarity=0.046 Sum_probs=50.4
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCC-hHHHHHH---HHHHHHhCCCceEEEEcchh
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRS-HNKVMDI---QKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s-~~kv~~i---~~~a~~~gl~~i~~~~~Da~ 322 (495)
.++|++|||++||+|..+..+|.. ...+.|+|+|.| ...+..+ ++++++.|+.++.+...|+.
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~-~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~ 88 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIN-DQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAE 88 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHT-CTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTT
T ss_pred CCCCCEEEEEeccCcHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHH
Confidence 368999999999999999999864 345799999999 5444444 77777888888888887763
No 189
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.73 E-value=3e-08 Score=92.32 Aligned_cols=46 Identities=20% Similarity=0.249 Sum_probs=39.9
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHH
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a 306 (495)
...++.+|||++||+|..+..++.. ..+|+++|.|...+..+++++
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~ 85 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL 85 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc
Confidence 4567899999999999999999885 369999999999998887765
No 190
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.73 E-value=2.5e-08 Score=98.29 Aligned_cols=70 Identities=17% Similarity=0.118 Sum_probs=60.2
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCCh-------HHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH-------NKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~-------~kv~~i~~~a~~~gl~~-i~~~~~Da~~ 323 (495)
+...++.+.+|.+|||+|||.|..|..+|.. .++|+++|+|+ ..+..++++++.+|+.+ |+++..|+..
T Consensus 74 ~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~ 150 (258)
T 2r6z_A 74 LIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAE 150 (258)
T ss_dssp HHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHH
T ss_pred HHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHH
Confidence 3444557778899999999999999999984 36899999999 99999999999888866 9999999876
Q ss_pred H
Q 011036 324 A 324 (495)
Q Consensus 324 ~ 324 (495)
.
T Consensus 151 ~ 151 (258)
T 2r6z_A 151 Q 151 (258)
T ss_dssp H
T ss_pred H
Confidence 4
No 191
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.72 E-value=3.8e-08 Score=97.40 Aligned_cols=64 Identities=16% Similarity=0.152 Sum_probs=51.9
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh--CC--CceEEEEcchhHHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL--KCITTYKLDALKAV 325 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~--gl--~~i~~~~~Da~~~~ 325 (495)
.+.+|||+|||.|+.+..++.. .+..+|+++|+++..+..+++++..+ ++ ..++++..|+.+.+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l 142 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKH-PSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHI 142 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTC-TTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHH
T ss_pred CCCEEEEECCchHHHHHHHHhC-CCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHH
Confidence 3579999999999999888764 24579999999999999999987654 33 46889999987643
No 192
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.72 E-value=3.5e-08 Score=98.12 Aligned_cols=62 Identities=18% Similarity=0.168 Sum_probs=50.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh-------CCCceEEEEcchhH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-------GLKCITTYKLDALK 323 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~-------gl~~i~~~~~Da~~ 323 (495)
.++.+|||+|||+|..+..++.. ...+|+++|.|+..+..+++++... +...+.++..|+..
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 101 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSK 101 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccc
Confidence 36889999999999999998873 3569999999999999999988776 34467788877643
No 193
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.72 E-value=2.2e-08 Score=95.37 Aligned_cols=54 Identities=19% Similarity=0.149 Sum_probs=43.7
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.++|.+|||++||+|..+..++.. ..+|+++|.|+..+..++++ +.++..|+..
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~ 92 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK--------FNVVKSDAIE 92 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT--------SEEECSCHHH
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh--------cceeeccHHH
Confidence 467899999999999999998885 34799999999888766544 6677777655
No 194
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.72 E-value=3.6e-08 Score=99.23 Aligned_cols=64 Identities=16% Similarity=0.186 Sum_probs=52.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh--CC--CceEEEEcchhHH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL--KCITTYKLDALKA 324 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~--gl--~~i~~~~~Da~~~ 324 (495)
..+.+|||++||.|+.+..++.. .+.++|+++|+++..+..+++++..+ ++ ..++++..|+.+.
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~ 161 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKH-PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEF 161 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHH
Confidence 45689999999999999988874 34579999999999999999988763 33 5688999998764
No 195
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.71 E-value=1.3e-08 Score=99.42 Aligned_cols=60 Identities=28% Similarity=0.339 Sum_probs=47.8
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
...+++.++.+|||++||+|..+..++. ..++|+++|.|+.++..+++++ .++.+...|+
T Consensus 50 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~ 109 (279)
T 3ccf_A 50 LQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADA 109 (279)
T ss_dssp HHHHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCT
T ss_pred HHHhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECCh
Confidence 3556778999999999999999999988 3479999999999988776653 4455666554
No 196
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.71 E-value=3.1e-08 Score=88.97 Aligned_cols=57 Identities=11% Similarity=0.094 Sum_probs=45.6
Q ss_pred hcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcc
Q 011036 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~D 320 (495)
.+++.++.+|||++||+|..+..++... .+|+++|.|+..+..++++ ..+++++..|
T Consensus 12 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d 68 (170)
T 3i9f_A 12 NIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-----FDSVITLSDP 68 (170)
T ss_dssp HHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-----CTTSEEESSG
T ss_pred hcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC
Confidence 3467789999999999999999998864 4999999999988877665 3456655554
No 197
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.70 E-value=1.1e-08 Score=99.57 Aligned_cols=50 Identities=12% Similarity=0.157 Sum_probs=40.2
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM 309 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~ 309 (495)
.+.+|.+|||++||+|..+..++.. +..+|+|+|.|+.++..++++++..
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~ 101 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKE 101 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTC
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcC
Confidence 4578999999999999776654442 2347999999999999999887754
No 198
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.70 E-value=1.3e-08 Score=96.69 Aligned_cols=55 Identities=13% Similarity=0.099 Sum_probs=45.9
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
+.+|.+|||+|||+|..+.+++.. ..+|+++|.|+..+..++++ ..+++++..|+
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~ 100 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-----APHADVYEWNG 100 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCS
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-----CCCceEEEcch
Confidence 367899999999999999998886 36999999999999877766 44677777775
No 199
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.70 E-value=2.8e-07 Score=95.73 Aligned_cols=69 Identities=14% Similarity=0.050 Sum_probs=59.1
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCC-------------------------------------CcEEEEEeCChH
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRD-------------------------------------EGEVVAVDRSHN 297 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~-------------------------------------~G~ViA~D~s~~ 297 (495)
.+...++|.+|||.|||+|+.+..+|....+ ...|+++|+++.
T Consensus 189 ~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ 268 (385)
T 3ldu_A 189 YLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEE 268 (385)
T ss_dssp HTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHH
T ss_pred HhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHH
Confidence 4567789999999999999999888876432 257999999999
Q ss_pred HHHHHHHHHHHhCCC-ceEEEEcchhH
Q 011036 298 KVMDIQKLAAEMGLK-CITTYKLDALK 323 (495)
Q Consensus 298 kv~~i~~~a~~~gl~-~i~~~~~Da~~ 323 (495)
.+..++++++..|+. .|++...|+.+
T Consensus 269 ai~~Ar~Na~~~gl~~~i~~~~~D~~~ 295 (385)
T 3ldu_A 269 SIDIARENAEIAGVDEYIEFNVGDATQ 295 (385)
T ss_dssp HHHHHHHHHHHHTCGGGEEEEECCGGG
T ss_pred HHHHHHHHHHHcCCCCceEEEECChhh
Confidence 999999999999996 69999988754
No 200
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.69 E-value=1.6e-08 Score=95.71 Aligned_cols=56 Identities=20% Similarity=0.115 Sum_probs=45.0
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
.++.+|||++||+|..+.+++.. ..+|+++|.|+..+..+++++ ...++.++..|+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~ 107 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDL 107 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcch
Confidence 47889999999999999999885 358999999999987776653 234577777765
No 201
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.69 E-value=6.9e-08 Score=96.82 Aligned_cols=64 Identities=17% Similarity=0.087 Sum_probs=51.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh----CCCceEEEEcchhHH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM----GLKCITTYKLDALKA 324 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~----gl~~i~~~~~Da~~~ 324 (495)
.++.+|||++||.|+.+..++.. .+..+|+++|+|+..+..+++++..+ ....++++..|+.+.
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~ 161 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRH-GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAF 161 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHH
Confidence 45789999999999999998874 34579999999999999998887542 235688888888764
No 202
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.69 E-value=7.3e-08 Score=95.71 Aligned_cols=64 Identities=11% Similarity=0.131 Sum_probs=51.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhC----CCceEEEEcchhHH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG----LKCITTYKLDALKA 324 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~g----l~~i~~~~~Da~~~ 324 (495)
.++.+|||++||.|+.+..++.. .+..+|+++|+++..+..+++++..++ -..++++..|+.+.
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~ 144 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF 144 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH
T ss_pred CCCCeEEEEeCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHH
Confidence 35689999999999999988864 345799999999999999988876543 35688888888764
No 203
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.68 E-value=7.2e-08 Score=95.42 Aligned_cols=54 Identities=13% Similarity=0.016 Sum_probs=46.2
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHH
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE 308 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~ 308 (495)
.....+++++|.+|||++||+|..|..+|.. .++|+|+|.|+.++..++++++.
T Consensus 36 ~il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~ 89 (261)
T 3iv6_A 36 NDIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALAD 89 (261)
T ss_dssp HHHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSS
T ss_pred HHHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHh
Confidence 4456678899999999999999999999884 36899999999999988887654
No 204
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.68 E-value=4.1e-08 Score=99.53 Aligned_cols=64 Identities=13% Similarity=0.159 Sum_probs=51.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh--CC--CceEEEEcchhHH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL--KCITTYKLDALKA 324 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~--gl--~~i~~~~~Da~~~ 324 (495)
..+.+|||+|||+|+.+..++... +..+|+++|+|+..+..++++++.+ ++ ..++++..|+.+.
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~ 182 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF 182 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHH
Confidence 346899999999999999888743 3579999999999999999887763 22 4688888888764
No 205
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.68 E-value=1.7e-08 Score=95.08 Aligned_cols=56 Identities=14% Similarity=0.170 Sum_probs=44.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
.++.+|||++||+|..+..++... .+|+++|.|+..+..+++.+.. ++.++..|+.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~ 96 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD----GITYIHSRFE 96 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS----CEEEEESCGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHH
Confidence 578899999999999998888742 3799999999998877766442 5777777653
No 206
>1q7h_A Conserved hypothetical protein; structural genomics, MCSG, PSI, PR structure initiative; 2.10A {Thermoplasma acidophilum dsm 1728} SCOP: b.122.1.1 d.17.6.2
Probab=98.67 E-value=1.1e-08 Score=93.25 Aligned_cols=73 Identities=23% Similarity=0.489 Sum_probs=66.7
Q ss_pred CCCeEEEccchHHHHHcccccccCceeeccCCccCCCeEEEEEcccCCcCCCCCccccccccccccCCCCCCcccCCCce
Q 011036 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (495)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGIl~~~~~i~~Gd~VaV~~~l~~~~~~~~w~~~~~rg~~l~~~~~~~~~~~r~~l~ 201 (495)
..+.|+||..|++|+++||+|++|||+.++.++++||.|+|+ +.++..
T Consensus 69 ~~~~v~vd~ga~~~l~~Ga~ll~~GV~~~~~~~~~gd~V~V~--------------------------------~~~g~~ 116 (153)
T 1q7h_A 69 SRNIVTVDEGAEPHILNGSDLFAPGIVSMDDSIRKGDMIFVK--------------------------------SSKGYF 116 (153)
T ss_dssp SSSEEEECTTTHHHHTTTCCEEGGGEEEECTTCCTTCEEEEE--------------------------------ETTSCE
T ss_pred cCCEEEECHhHHHHHHcCCCcCccccCcccCceeCCCEEEEE--------------------------------ECCCCE
Confidence 568999999999999999999999999999999999999999 336789
Q ss_pred EeecccccccccccccccceeeecC
Q 011036 202 IGQGTAMMSRAGIFRASEGIAVDMH 226 (495)
Q Consensus 202 Vg~GialmSr~elf~~p~GIaVe~~ 226 (495)
+|.|++.+|.+++....+|.++++.
T Consensus 117 ia~G~~~~ss~e~~~~~~G~~v~v~ 141 (153)
T 1q7h_A 117 IAVGMAEMDAGEVMATKRGKAARII 141 (153)
T ss_dssp EEEEEESSCHHHHHHHCCSEEEEEE
T ss_pred EEEEEEecCHHHHHhcCCCeEEEEE
Confidence 9999999999999888889888764
No 207
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.67 E-value=3.7e-07 Score=95.18 Aligned_cols=69 Identities=16% Similarity=0.082 Sum_probs=58.7
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCC-------------------------------------CcEEEEEeCChH
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRD-------------------------------------EGEVVAVDRSHN 297 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~-------------------------------------~G~ViA~D~s~~ 297 (495)
.+.+.+++.+|||.+||+|+.+..+|.+..+ ...|+++|+|+.
T Consensus 195 ~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ 274 (393)
T 3k0b_A 195 LLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDAR 274 (393)
T ss_dssp HHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHH
T ss_pred HHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHH
Confidence 4567889999999999999998887765443 146999999999
Q ss_pred HHHHHHHHHHHhCCCc-eEEEEcchhH
Q 011036 298 KVMDIQKLAAEMGLKC-ITTYKLDALK 323 (495)
Q Consensus 298 kv~~i~~~a~~~gl~~-i~~~~~Da~~ 323 (495)
.+..+++|++..|+.. |++...|+.+
T Consensus 275 al~~Ar~Na~~~gl~~~I~~~~~D~~~ 301 (393)
T 3k0b_A 275 LIEIAKQNAVEAGLGDLITFRQLQVAD 301 (393)
T ss_dssp HHHHHHHHHHHTTCTTCSEEEECCGGG
T ss_pred HHHHHHHHHHHcCCCCceEEEECChHh
Confidence 9999999999999974 8999988755
No 208
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.66 E-value=1.6e-08 Score=96.76 Aligned_cols=50 Identities=20% Similarity=0.252 Sum_probs=40.6
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM 309 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~ 309 (495)
...+|.+|||++||+|..+..++.. ...+|+++|.|+..+..++++++..
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~ 102 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACE--SFTEIIVSDYTDQNLWELQKWLKKE 102 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHTTC
T ss_pred cccCCCEEEEECCCccHHHHHHhhc--ccCeEEEecCCHHHHHHHHHHHhcC
Confidence 4467899999999999988777653 2258999999999999988887643
No 209
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.66 E-value=1.1e-07 Score=100.63 Aligned_cols=75 Identities=13% Similarity=0.106 Sum_probs=60.4
Q ss_pred ccccHHH--HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHH-------HHHHHHhC--CCce
Q 011036 246 QNLPSIV--TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDI-------QKLAAEMG--LKCI 314 (495)
Q Consensus 246 Q~l~S~v--~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i-------~~~a~~~g--l~~i 314 (495)
|-.+.++ ....+++++|++|||+|||+|..+..+|.+.+ .++|+++|+++..+..+ +++++.+| +.+|
T Consensus 225 et~p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV 303 (433)
T 1u2z_A 225 ELLPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNV 303 (433)
T ss_dssp CBCHHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCE
T ss_pred cccHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCce
Confidence 3345443 23456889999999999999999999998764 46899999999988887 88999999 5688
Q ss_pred EEEEcch
Q 011036 315 TTYKLDA 321 (495)
Q Consensus 315 ~~~~~Da 321 (495)
+++..|.
T Consensus 304 ~~i~gD~ 310 (433)
T 1u2z_A 304 EFSLKKS 310 (433)
T ss_dssp EEEESSC
T ss_pred EEEEcCc
Confidence 8887764
No 210
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.66 E-value=6.1e-08 Score=89.53 Aligned_cols=54 Identities=19% Similarity=0.131 Sum_probs=43.7
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
+.+|||++||+|..+..++.. ..+|+++|.|+..+..++++ ..++.++..|+..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~ 95 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQT-----HPSVTFHHGTITD 95 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGGG
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCcccc
Confidence 889999999999999999885 34899999999998777665 3457777777643
No 211
>3r90_A Malignant T cell-amplified sequence 1; structural genomics consortium, surface entropy reduction, S binding protein; 1.70A {Homo sapiens}
Probab=98.65 E-value=9.7e-09 Score=97.16 Aligned_cols=74 Identities=20% Similarity=0.282 Sum_probs=66.3
Q ss_pred CCCeEEEccchHHHHHcccccccCceeeccC---CccCCCeEEEEEcccCCcCCCCCccccccccccccCCCCCCcccCC
Q 011036 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSS---HVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERS 198 (495)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGIl~~~~---~i~~Gd~VaV~~~l~~~~~~~~w~~~~~rg~~l~~~~~~~~~~~r~ 198 (495)
..+.|+||+.|.++|++||+||+|||+..+. .+++||.|+|+. +.+
T Consensus 91 ~lp~v~Vd~~av~~v~~GA~Lm~PGv~~~~~~~~~i~~Gd~V~V~~-------------------------------~~~ 139 (188)
T 3r90_A 91 ILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAAVDTIVAIMA-------------------------------AGA 139 (188)
T ss_dssp GSCEEEECGGGHHHHTTTCCEETHHHHSTTCBCCCCCTTCEEEEEE-------------------------------TTC
T ss_pred cCCEEEEChhHHHHhhcCCccccCeEEccCCCcccccCCCEEEEEE-------------------------------CCC
Confidence 3579999999999999999999999999986 799999999992 225
Q ss_pred CceEeecccccccccccccccceeeecC
Q 011036 199 GLYIGQGTAMMSRAGIFRASEGIAVDMH 226 (495)
Q Consensus 199 ~l~Vg~GialmSr~elf~~p~GIaVe~~ 226 (495)
+..+++|++.||.+++....+|.+|+..
T Consensus 140 ~~~vAVG~a~mss~e~~~~~kG~aV~v~ 167 (188)
T 3r90_A 140 AHALCVGVMKMSAEDIEKVNKGIGIENI 167 (188)
T ss_dssp SSCSEEEEESSCHHHHHHHCCSEEEEEE
T ss_pred CcEEEEEEEEeCHHHHhhcCCcEEEEEE
Confidence 6789999999999999988999999875
No 212
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.65 E-value=6.5e-08 Score=104.98 Aligned_cols=84 Identities=11% Similarity=0.042 Sum_probs=64.5
Q ss_pred cccEEEccccHHHHHhhcC----CCCCCeEEEecCCCChHHHHHHHhcCC--CcEEEEEeCChHHHHHHHHHHHHhCC--
Q 011036 240 EGEIFLQNLPSIVTAHALD----PQKGERILDMCAAPGGKTTAIASLLRD--EGEVVAVDRSHNKVMDIQKLAAEMGL-- 311 (495)
Q Consensus 240 ~G~i~lQ~l~S~v~~~~Ld----pqpGerVLDmCAaPGgKT~~iA~lm~~--~G~ViA~D~s~~kv~~i~~~a~~~gl-- 311 (495)
.|.||--..-+.+.+.+++ |++|.+|||.|||+|+....++..+.. ...++|+|++...+..++.++...|+
T Consensus 196 ~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~ 275 (542)
T 3lkd_A 196 AGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPI 275 (542)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCG
T ss_pred CCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCc
Confidence 4555433333445555555 788999999999999999999887743 56899999999999999999888888
Q ss_pred CceEEEEcchhH
Q 011036 312 KCITTYKLDALK 323 (495)
Q Consensus 312 ~~i~~~~~Da~~ 323 (495)
..+.+...|.+.
T Consensus 276 ~~~~I~~gDtL~ 287 (542)
T 3lkd_A 276 ENQFLHNADTLD 287 (542)
T ss_dssp GGEEEEESCTTT
T ss_pred CccceEecceec
Confidence 457777777654
No 213
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.64 E-value=1.8e-08 Score=97.64 Aligned_cols=60 Identities=25% Similarity=0.170 Sum_probs=45.3
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
....+.+.++.+|||++||+|..+..++. ...+|+++|.|+..+..++++. ++.++..|+
T Consensus 26 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~ 85 (261)
T 3ege_A 26 IINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYA 85 (261)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT------TEEEECCCT
T ss_pred HHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc------CCEEEECch
Confidence 34556678899999999999999999887 3479999999997765443322 566666554
No 214
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.63 E-value=8.5e-08 Score=96.67 Aligned_cols=63 Identities=17% Similarity=0.067 Sum_probs=52.0
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh--C---CCceEEEEcchhHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--G---LKCITTYKLDALKA 324 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~--g---l~~i~~~~~Da~~~ 324 (495)
.+.+|||++||.|+.+..++... +..+|+++|+++..+..+++++..+ | -..++++..|+.+.
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~ 144 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAY 144 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHH
Confidence 45799999999999999888753 3579999999999999999988762 2 35689999998764
No 215
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.63 E-value=8.6e-08 Score=107.94 Aligned_cols=70 Identities=14% Similarity=0.197 Sum_probs=55.9
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh------CCCceEEEEcchhH
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM------GLKCITTYKLDALK 323 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~------gl~~i~~~~~Da~~ 323 (495)
...+.+.+|.+|||++||+|..+..++...++..+|+|+|+|+.++..++++++.. |+.+|+++..|+..
T Consensus 714 LelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~d 789 (950)
T 3htx_A 714 LKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILE 789 (950)
T ss_dssp HHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTS
T ss_pred HHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHh
Confidence 44455668999999999999999988876434479999999999999998866543 66778888888643
No 216
>3d79_A PUA domain, putative uncharacterized protein PH0734; unknown function; 1.73A {Pyrococcus horikoshii}
Probab=98.63 E-value=3.4e-08 Score=92.59 Aligned_cols=72 Identities=29% Similarity=0.466 Sum_probs=65.7
Q ss_pred CeEEEccchHHHHHcccccccCceeeccCCccCCCeEEEEEcccCCcCCCCCccccccccccccCCCCCCcccCCCceEe
Q 011036 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIG 203 (495)
Q Consensus 124 k~ViVd~~~~eAVLrGA~v~aPGIl~~~~~i~~Gd~VaV~~~l~~~~~~~~w~~~~~rg~~l~~~~~~~~~~~r~~l~Vg 203 (495)
..|+||+.|++|+++||+|++|||++++.++++||.|+|+. +.++..+|
T Consensus 95 ~~v~vd~gA~~~l~~GasL~~~GV~~~~g~f~~Gd~V~v~~-------------------------------~~~g~~ia 143 (179)
T 3d79_A 95 RRVVVDEGAVPHILNGADVMAPGIVDADEGIKEGDFVFVVE-------------------------------EKYGRPLA 143 (179)
T ss_dssp TEEEECGGGHHHHHTTCCEEGGGEEEECTTCCTTCEEEEEE-------------------------------TTTCCEEE
T ss_pred CEEEECccHHHHHhCCCCcCCCcEEEccCCccCCCEEEEEE-------------------------------CCCCeEEE
Confidence 79999999999999999999999999999999999999992 22577999
Q ss_pred ecccccccccccccccceeeecC
Q 011036 204 QGTAMMSRAGIFRASEGIAVDMH 226 (495)
Q Consensus 204 ~GialmSr~elf~~p~GIaVe~~ 226 (495)
.|++.+|.+++....+|.++++.
T Consensus 144 vG~~~~ss~e~~~~~kG~av~~~ 166 (179)
T 3d79_A 144 IGIALMSGKVMKEKNRGKAVKVI 166 (179)
T ss_dssp EEEESSCHHHHHHCSSSEEEEEE
T ss_pred EEEEEcCHHHHHhcCCceEEEEE
Confidence 99999999999888899988864
No 217
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.62 E-value=7.4e-08 Score=102.96 Aligned_cols=64 Identities=17% Similarity=0.090 Sum_probs=54.1
Q ss_pred hcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchh
Q 011036 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~ 322 (495)
.++..++.+|||+|||+|..+..+|.. +..+|+|+|.|+ ++..++++++.+|+ ..|+++..|+.
T Consensus 153 ~l~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~ 217 (480)
T 3b3j_A 153 NHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVE 217 (480)
T ss_dssp TGGGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred hhhhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchh
Confidence 345567899999999999999888873 456999999998 88999999999998 57888888864
No 218
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.62 E-value=3.9e-07 Score=94.81 Aligned_cols=69 Identities=14% Similarity=0.066 Sum_probs=58.7
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCC-------------------------------------CcEEEEEeCChH
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRD-------------------------------------EGEVVAVDRSHN 297 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~-------------------------------------~G~ViA~D~s~~ 297 (495)
.+.+.++++.|||.+||+|+.....|....+ ...|+++|+|+.
T Consensus 188 ~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~ 267 (384)
T 3ldg_A 188 LLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGR 267 (384)
T ss_dssp HHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHH
T ss_pred HHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHH
Confidence 4557789999999999999998887765443 156999999999
Q ss_pred HHHHHHHHHHHhCCCc-eEEEEcchhH
Q 011036 298 KVMDIQKLAAEMGLKC-ITTYKLDALK 323 (495)
Q Consensus 298 kv~~i~~~a~~~gl~~-i~~~~~Da~~ 323 (495)
.+..+++|++..|+.. |++...|+.+
T Consensus 268 al~~Ar~Na~~~gl~~~I~~~~~D~~~ 294 (384)
T 3ldg_A 268 MVEIARKNAREVGLEDVVKLKQMRLQD 294 (384)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEECCGGG
T ss_pred HHHHHHHHHHHcCCCCceEEEECChHH
Confidence 9999999999999975 9999998755
No 219
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.60 E-value=4.2e-08 Score=96.78 Aligned_cols=58 Identities=17% Similarity=0.225 Sum_probs=44.0
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcC---CCcEE--EEEeCChHHHHHHHHHHHHh-CCCceEE
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLR---DEGEV--VAVDRSHNKVMDIQKLAAEM-GLKCITT 316 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~---~~G~V--iA~D~s~~kv~~i~~~a~~~-gl~~i~~ 316 (495)
++++.+|||++||+|..|..++..+. ....| +++|.|..++..+++.++.. ++.++.+
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~ 113 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKF 113 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceE
Confidence 56788999999999988776554331 34544 99999999999998888764 5665544
No 220
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.60 E-value=1.8e-07 Score=92.45 Aligned_cols=61 Identities=11% Similarity=0.091 Sum_probs=44.6
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeC-ChHHHHHHHHHH-----HHhCCC-----ceEEEEcc
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDR-SHNKVMDIQKLA-----AEMGLK-----CITTYKLD 320 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~-s~~kv~~i~~~a-----~~~gl~-----~i~~~~~D 320 (495)
+..+|.+|||+|||+|..+..++.. +.++|+|+|. |+..+..+++++ +..|+. +|++..+|
T Consensus 76 ~~~~~~~vLDlG~G~G~~~~~~a~~--~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~ 147 (281)
T 3bzb_A 76 ELIAGKTVCELGAGAGLVSIVAFLA--GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYR 147 (281)
T ss_dssp GGTTTCEEEETTCTTSHHHHHHHHT--TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECC
T ss_pred hhcCCCeEEEecccccHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEec
Confidence 3457899999999999999888774 3469999999 899999999999 555553 45555443
No 221
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.60 E-value=1.2e-07 Score=89.75 Aligned_cols=58 Identities=22% Similarity=0.142 Sum_probs=47.0
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchh
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~ 322 (495)
+.+|||++||+|..+..++. ...+|+++|.|+..+..++++++..+. .+++++..|+.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 125 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVF 125 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTT
T ss_pred CCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchh
Confidence 34999999999999988765 357899999999999999998876543 45777777753
No 222
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.60 E-value=5.8e-08 Score=101.96 Aligned_cols=61 Identities=13% Similarity=0.165 Sum_probs=55.7
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh--CCCceEEEEcchhHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GLKCITTYKLDALKA 324 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~--gl~~i~~~~~Da~~~ 324 (495)
+|.+|||+|||.|..+.++|.. .++|+++|+|+.++..+++|++.+ |+.+|++++.|+.+.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~ 155 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEY 155 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGS
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHh
Confidence 5999999999999999998874 369999999999999999999999 998899999998763
No 223
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.59 E-value=5.8e-08 Score=98.29 Aligned_cols=63 Identities=14% Similarity=0.167 Sum_probs=51.8
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh--CC--CceEEEEcchhHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL--KCITTYKLDALKA 324 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~--gl--~~i~~~~~Da~~~ 324 (495)
.+.+|||+|||.|+.+..++... +.++|+++|+|+..+..+++++..+ |+ ..++++..|+.+.
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~ 174 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEF 174 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHH
Confidence 45799999999999999988753 4579999999999999999887654 33 4688888888764
No 224
>3zv0_C H/ACA ribonucleoprotein complex subunit 4; cell cycle, RNP assembly, X-linked dyskeratosis congenita; 2.80A {Saccharomyces cerevisiae}
Probab=98.58 E-value=4.5e-08 Score=92.74 Aligned_cols=74 Identities=22% Similarity=0.351 Sum_probs=68.0
Q ss_pred CCCeEEEccchHHHHHcccccccCceeeccCCccCCCeEEEEEcccCCcCCCCCccccccccccccCCCCCCcccCCCce
Q 011036 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (495)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGIl~~~~~i~~Gd~VaV~~~l~~~~~~~~w~~~~~rg~~l~~~~~~~~~~~r~~l~ 201 (495)
+.+.|+||..|++|+++||+|++|||+..+..|++||.|.|+ +.++..
T Consensus 74 ~~g~VvVD~GAv~Al~~GaSLl~pGV~~v~g~F~~GD~V~V~--------------------------------~~~G~~ 121 (195)
T 3zv0_C 74 GYKRIVVKDSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLI--------------------------------TTKGEA 121 (195)
T ss_dssp TSEEEEECHHHHHHHHTTCCEEGGGEEEEETTCCTTCEEEEE--------------------------------CTTCCE
T ss_pred cCCeEEECHHHHHHHhcCCCccCCCcEecCCCcCCCCEEEEE--------------------------------cCCCCE
Confidence 668999999999999999999999999999999999999999 335679
Q ss_pred EeecccccccccccccccceeeecCC
Q 011036 202 IGQGTAMMSRAGIFRASEGIAVDMHN 227 (495)
Q Consensus 202 Vg~GialmSr~elf~~p~GIaVe~~~ 227 (495)
||.|++.+|.+++....+|++++...
T Consensus 122 IAvG~a~~sS~Ei~~~~kG~aVkv~r 147 (195)
T 3zv0_C 122 IAVAIAQMSTVDLASCDHGVVASVKR 147 (195)
T ss_dssp EEEEEESSCHHHHHHCSSSEEEEEEE
T ss_pred EEEEEEcCCHHHHhhcCCcEEEEEEE
Confidence 99999999999999989999998764
No 225
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.57 E-value=1e-07 Score=90.75 Aligned_cols=56 Identities=9% Similarity=-0.073 Sum_probs=48.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEE
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITT 316 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~ 316 (495)
.+.++|||++||.|..+..++.+-.+ .+|+|+|+|..+++.++++++++|+. ++.+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~-a~~~A~Di~~~~leiar~~~~~~g~~~~v~~ 104 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEK-IIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF 104 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCC-CEEEEECSCHHHHHHHHHHHHHSCCSSEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCC-CEEEEEeCCHHHHHHHHHHHHhcCCCccEEE
Confidence 44679999999999998888775444 49999999999999999999999998 4655
No 226
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.57 E-value=1.8e-07 Score=96.77 Aligned_cols=63 Identities=19% Similarity=0.260 Sum_probs=50.5
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhC---CC-----ceEEEEcchhHHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG---LK-----CITTYKLDALKAV 325 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~g---l~-----~i~~~~~Da~~~~ 325 (495)
.+.+|||+++|.|+.+..++..- ..+|+++|+++..+..+++++..++ ++ +++++..|+++.+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L 258 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVL 258 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHH
Confidence 46899999999999988887642 3799999999999999988875432 22 5899999998865
No 227
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.57 E-value=9.8e-08 Score=88.66 Aligned_cols=51 Identities=20% Similarity=0.098 Sum_probs=39.0
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
++.+|||++||+|..+..+ +..+|+++|.|+..+..+++++ ..+.++..|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~ 86 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWG 86 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCT
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEccc
Confidence 7899999999999887665 2238999999999988776654 3455555554
No 228
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.57 E-value=9.5e-08 Score=89.95 Aligned_cols=54 Identities=15% Similarity=0.213 Sum_probs=43.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
.++.+|||++||+|..+..++... .+|+++|.|+..+..++++. .++.++..|+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~ 92 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-----PDATLHQGDM 92 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-----TTCEEEECCT
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCH
Confidence 568899999999999999998863 38999999999988776653 3466666665
No 229
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.55 E-value=2.1e-07 Score=94.62 Aligned_cols=62 Identities=10% Similarity=-0.056 Sum_probs=51.2
Q ss_pred CeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHHH
Q 011036 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (495)
Q Consensus 263 erVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~~ 325 (495)
.+|||++||.|+.+..++.... ..+|+++|+++..+..+++++....-..++++..|+.+.+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l 152 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVA 152 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHH
T ss_pred CEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHH
Confidence 4999999999999999998654 4599999999999988888765444457899999987754
No 230
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.53 E-value=7.3e-08 Score=104.59 Aligned_cols=73 Identities=15% Similarity=0.199 Sum_probs=56.9
Q ss_pred ccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCC--------------CcEEEEEeCChHHHHHHHH
Q 011036 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD--------------EGEVVAVDRSHNKVMDIQK 304 (495)
Q Consensus 239 ~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~--------------~G~ViA~D~s~~kv~~i~~ 304 (495)
..|.||--..-+.+.+.+++|++| +|||.|||+|+....++..+.. ...++++|++...+..++.
T Consensus 223 ~~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~ 301 (544)
T 3khk_A 223 QGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAM 301 (544)
T ss_dssp CSTTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHH
T ss_pred cCCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHH
Confidence 346666555556667788899988 9999999999998888765431 3589999999999988888
Q ss_pred HHHHhCCC
Q 011036 305 LAAEMGLK 312 (495)
Q Consensus 305 ~a~~~gl~ 312 (495)
++...|+.
T Consensus 302 Nl~l~gi~ 309 (544)
T 3khk_A 302 NMVIRGID 309 (544)
T ss_dssp HHHHTTCC
T ss_pred HHHHhCCC
Confidence 88777653
No 231
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.53 E-value=5.7e-08 Score=95.40 Aligned_cols=47 Identities=11% Similarity=0.174 Sum_probs=36.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE 308 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~ 308 (495)
.+|.+|||++||+|. +..++... ...+|+|+|.|+.++..+++++++
T Consensus 70 ~~~~~vLDiGcG~G~-~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~ 116 (289)
T 2g72_A 70 VSGRTLIDIGSGPTV-YQLLSACS-HFEDITMTDFLEVNRQELGRWLQE 116 (289)
T ss_dssp SCCSEEEEETCTTCC-GGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTT
T ss_pred CCCCeEEEECCCcCh-HHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhh
Confidence 478999999999999 44433322 235999999999999988876653
No 232
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.53 E-value=1.8e-07 Score=90.36 Aligned_cols=43 Identities=23% Similarity=0.196 Sum_probs=37.1
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a 306 (495)
++.+|||++||+|..+..++.. ..+|+++|.|+..+..+++++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~ 96 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKG 96 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHT
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhc
Confidence 7889999999999999988874 368999999999988776653
No 233
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.52 E-value=2.6e-07 Score=85.69 Aligned_cols=60 Identities=22% Similarity=0.121 Sum_probs=45.7
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
..+...++.+|||++||+|..+..++.. ..+|+++|.|+..+..++++ ..+.+...|...
T Consensus 46 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~ 105 (227)
T 3e8s_A 46 LAILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQ 105 (227)
T ss_dssp HHHHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHH
T ss_pred HHhhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh------cccccchhhHHh
Confidence 3344566799999999999999988875 35899999999988766655 345566666544
No 234
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.52 E-value=4.4e-08 Score=96.30 Aligned_cols=52 Identities=19% Similarity=0.157 Sum_probs=39.7
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
.+.+|||++||+|..|..++.. ..+|+|+|.|+.++..+++ ..+|.+...|+
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~------~~~v~~~~~~~ 90 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR------HPRVTYAVAPA 90 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC------CTTEEEEECCT
T ss_pred CCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh------cCCceeehhhh
Confidence 3579999999999999998874 2589999999988754322 24566666664
No 235
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.52 E-value=2.4e-07 Score=89.28 Aligned_cols=55 Identities=16% Similarity=0.130 Sum_probs=43.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
.++.+|||++||+|..+..++.. ..+|+++|.|+..+..+++++. .+.++..|+.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~ 103 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP-----DAVLHHGDMR 103 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT-----TSEEEECCTT
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC-----CCEEEECChH
Confidence 35789999999999999888774 3589999999999887776543 5677777753
No 236
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.51 E-value=1.1e-07 Score=91.84 Aligned_cols=56 Identities=23% Similarity=0.179 Sum_probs=44.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
.++.+|||++||+|..+..++..+. .++|+++|.|+.++..++++. ..+.+...|+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~ 139 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY-----PQVTFCVASS 139 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC-----TTSEEEECCT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcch
Confidence 6789999999999999999998763 469999999999987665542 3455555554
No 237
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.50 E-value=3.2e-07 Score=87.29 Aligned_cols=60 Identities=18% Similarity=0.179 Sum_probs=50.0
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.++++.+|||++||+|..+..++.... +|+++|.|+..+..+++++ ...+++++..|+..
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~ 112 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKEN---TAANISYRLLDGLV 112 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTC
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhC---cccCceEEECcccc
Confidence 467899999999999999999998643 7999999999998887765 34478888888754
No 238
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.50 E-value=1e-06 Score=87.75 Aligned_cols=67 Identities=19% Similarity=0.176 Sum_probs=56.5
Q ss_pred hhcCC--CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhH
Q 011036 255 HALDP--QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (495)
Q Consensus 255 ~~Ldp--qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~ 323 (495)
..++. .++.+|||++||+|..+..++... +..+++++|.| ..+..++++++..|+. .|++...|..+
T Consensus 157 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 226 (335)
T 2r3s_A 157 QLVNENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFE 226 (335)
T ss_dssp HHHTC--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTT
T ss_pred HhcccccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEeccccc
Confidence 34566 788999999999999999999876 34699999999 9999999999999986 48888887643
No 239
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.50 E-value=1.9e-09 Score=104.32 Aligned_cols=75 Identities=12% Similarity=0.086 Sum_probs=56.0
Q ss_pred EEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 243 IFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 243 i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
|+.+..-.......+++++|++|||+|||+|..|.+++... ++|+|+|+|+..+..++++++ +..+++++..|+.
T Consensus 11 fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~ 85 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDIL 85 (245)
T ss_dssp BCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCT
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc--cCCceEEEECChh
Confidence 34444445556677888999999999999999999999862 789999999988766655544 2345666666653
No 240
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.48 E-value=8.5e-07 Score=90.03 Aligned_cols=68 Identities=24% Similarity=0.179 Sum_probs=57.8
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (495)
....++..++.+|||++||+|..+..++... +..+++++|+ +..+..++++++..|+. .|++...|++
T Consensus 174 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 242 (374)
T 1qzz_A 174 PADAYDWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFF 242 (374)
T ss_dssp HHHTSCCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHhCCCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCC
Confidence 3445677889999999999999999999875 3579999999 99999999999998886 6888888753
No 241
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.43 E-value=1.8e-06 Score=87.19 Aligned_cols=67 Identities=21% Similarity=0.209 Sum_probs=57.0
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (495)
...++..++.+|||+|||+|..+..++... ...+++++|+ +..+..++++++..|+. .|+++..|++
T Consensus 176 ~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 243 (360)
T 1tw3_A 176 AAAYDWTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFF 243 (360)
T ss_dssp HHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHhCCCccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCC
Confidence 445677889999999999999999999875 3479999999 89999999999998886 6888888753
No 242
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.43 E-value=1.8e-06 Score=87.58 Aligned_cols=69 Identities=14% Similarity=0.161 Sum_probs=58.5
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~ 323 (495)
....++..++.+|||++||+|..+..++... +..+++++|. +..+..+++++++.|+.. |++...|+.+
T Consensus 182 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 251 (359)
T 1x19_A 182 LLEEAKLDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYK 251 (359)
T ss_dssp HHHHCCCTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTT
T ss_pred HHHhcCCCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCcccc
Confidence 3445677889999999999999999999875 3579999999 999999999999988865 8888888643
No 243
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.42 E-value=2.4e-07 Score=86.12 Aligned_cols=45 Identities=13% Similarity=0.223 Sum_probs=37.7
Q ss_pred hcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHH
Q 011036 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~ 304 (495)
.+. .++.+|||++||+|..+..++.. + .+|+++|.|+..+..+++
T Consensus 28 ~~~-~~~~~vLdiG~G~G~~~~~l~~~--~-~~~~~~D~~~~~~~~~~~ 72 (230)
T 3cc8_A 28 HIK-KEWKEVLDIGCSSGALGAAIKEN--G-TRVSGIEAFPEAAEQAKE 72 (230)
T ss_dssp TCC-TTCSEEEEETCTTSHHHHHHHTT--T-CEEEEEESSHHHHHHHHT
T ss_pred Hhc-cCCCcEEEeCCCCCHHHHHHHhc--C-CeEEEEeCCHHHHHHHHH
Confidence 344 67899999999999999999886 3 799999999988765554
No 244
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.41 E-value=6.4e-07 Score=88.50 Aligned_cols=70 Identities=20% Similarity=0.201 Sum_probs=54.9
Q ss_pred HHHhhcCCCCC--CeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHh-------C-C-CceEEEEcc
Q 011036 252 VTAHALDPQKG--ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-------G-L-KCITTYKLD 320 (495)
Q Consensus 252 v~~~~LdpqpG--erVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~-------g-l-~~i~~~~~D 320 (495)
....++.+++| .+|||++||.|.-+..+|.. .++|+++|+++..+..++++.++. + + .+|+++..|
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D 153 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHAS 153 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESC
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECC
Confidence 44556777778 99999999999999999986 357999999998777776665433 2 3 468888888
Q ss_pred hhHH
Q 011036 321 ALKA 324 (495)
Q Consensus 321 a~~~ 324 (495)
+.+.
T Consensus 154 ~~~~ 157 (258)
T 2oyr_A 154 SLTA 157 (258)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 245
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.40 E-value=6e-07 Score=93.24 Aligned_cols=60 Identities=20% Similarity=0.160 Sum_probs=49.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchh
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDAL 322 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~ 322 (495)
-+|.+|||++||+|-.+...|+. +..+|+|+|.|. .+..++++++.+|+.. |+++..|+.
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a--GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~ 142 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA--GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVE 142 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred cCCCEEEEeCCCccHHHHHHHHh--CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeee
Confidence 36899999999999887666653 446899999996 7888999999999965 888887753
No 246
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.39 E-value=3.2e-06 Score=84.70 Aligned_cols=64 Identities=13% Similarity=0.092 Sum_probs=53.8
Q ss_pred cCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchh
Q 011036 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~ 322 (495)
++..++.+|||++||+|..+..++.... ..+++++|. +..+..+++++++.|+ ..|++...|.+
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 229 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF 229 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC
Confidence 3456678999999999999999998764 468999999 9999999999999887 45888887753
No 247
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.39 E-value=6.3e-06 Score=84.28 Aligned_cols=67 Identities=16% Similarity=0.131 Sum_probs=56.3
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (495)
...++..++.+|||++||+|..+..++... +..+++++|. +..+..+++++...|+. .|++...|.+
T Consensus 195 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~ 262 (369)
T 3gwz_A 195 AAAYDFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF 262 (369)
T ss_dssp HHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHhCCCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC
Confidence 344577788999999999999999999874 4568999999 99999999999998874 5888888763
No 248
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.37 E-value=3.1e-06 Score=94.41 Aligned_cols=69 Identities=20% Similarity=0.127 Sum_probs=58.3
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCC-----------------------------------------CcEEEEEe
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRD-----------------------------------------EGEVVAVD 293 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~-----------------------------------------~G~ViA~D 293 (495)
.+..++++++|||.|||+|+....+|....+ ...|+++|
T Consensus 184 ~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~D 263 (703)
T 3v97_A 184 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSD 263 (703)
T ss_dssp HHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_pred HhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEE
Confidence 4456788999999999999998887765321 25799999
Q ss_pred CChHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 011036 294 RSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (495)
Q Consensus 294 ~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~ 323 (495)
+++..+..+++|++..|+.. |++...|+.+
T Consensus 264 id~~av~~A~~N~~~agv~~~i~~~~~D~~~ 294 (703)
T 3v97_A 264 SDARVIQRARTNARLAGIGELITFEVKDVAQ 294 (703)
T ss_dssp SCHHHHHHHHHHHHHTTCGGGEEEEECCGGG
T ss_pred CCHHHHHHHHHHHHHcCCCCceEEEECChhh
Confidence 99999999999999999976 8999998765
No 249
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.36 E-value=1.1e-06 Score=88.46 Aligned_cols=66 Identities=20% Similarity=0.142 Sum_probs=57.8
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.+..+++++|++|||++||+|..|..++.. .++|+|+|+++..+..++++++ +..+++++..|+++
T Consensus 42 Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~ 107 (295)
T 3gru_A 42 AVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALK 107 (295)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTT
T ss_pred HHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhh
Confidence 456678899999999999999999999986 3799999999999999999887 45689999999865
No 250
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.35 E-value=3.9e-06 Score=83.89 Aligned_cols=63 Identities=17% Similarity=0.123 Sum_probs=51.9
Q ss_pred hcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcch
Q 011036 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDA 321 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da 321 (495)
.++..+ .+|||++||+|..+..++.... ..+++++|. +..+..++++++..|+ ..|++...|.
T Consensus 163 ~~~~~~-~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~ 226 (334)
T 2ip2_A 163 LLDFRG-RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDM 226 (334)
T ss_dssp HSCCTT-CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCT
T ss_pred hCCCCC-CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCC
Confidence 345566 8999999999999999998763 469999999 9999999998887776 3577777775
No 251
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.35 E-value=3.7e-07 Score=90.06 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=29.9
Q ss_pred CCCCCeEEEecCCCChHHHHHHHh--cCC-CcEEEEEeC
Q 011036 259 PQKGERILDMCAAPGGKTTAIASL--LRD-EGEVVAVDR 294 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~l--m~~-~G~ViA~D~ 294 (495)
.+||.+|||++|||||++...+.+ ++. .|.|+|+|.
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~ 109 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG 109 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc
Confidence 478999999999999999999987 433 577778774
No 252
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.33 E-value=1.7e-06 Score=87.22 Aligned_cols=67 Identities=10% Similarity=0.050 Sum_probs=55.8
Q ss_pred hhcCCCC-CCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhH
Q 011036 255 HALDPQK-GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (495)
Q Consensus 255 ~~Ldpqp-GerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~ 323 (495)
..++..+ +.+|||++||+|..+..++.... ..+++++|. +..+..++++++..++. .|++...|.++
T Consensus 172 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 240 (352)
T 3mcz_A 172 SELGVFARARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLD 240 (352)
T ss_dssp HTCGGGTTCCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTC
T ss_pred HhCCCcCCCCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCccc
Confidence 3456666 88999999999999999998754 479999999 77999999999998885 48888888644
No 253
>2cx0_A Hypothetical protein APE0525; PUA domain, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix} SCOP: b.122.1.1 d.17.6.4 PDB: 2cx1_A* 1zs7_A
Probab=98.32 E-value=2.4e-07 Score=87.48 Aligned_cols=73 Identities=26% Similarity=0.374 Sum_probs=63.7
Q ss_pred CCeEEEccchHHHHHcccccccCceeeccCCccCCCeEEEEEcccCCcCCCCCccccccccccccCCCCCCcccCCCceE
Q 011036 123 PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYI 202 (495)
Q Consensus 123 ~k~ViVd~~~~eAVLrGA~v~aPGIl~~~~~i~~Gd~VaV~~~l~~~~~~~~w~~~~~rg~~l~~~~~~~~~~~r~~l~V 202 (495)
+..|+||..|.+|+++||+|++|||+.++.++++||.|+|.. +.++..+
T Consensus 92 ~g~v~vd~gA~~al~~GasLl~~GV~~~~g~f~~Gd~V~I~~-------------------------------~~~g~~i 140 (187)
T 2cx0_A 92 KGVVLVDKGAAIALAKGAHLMIPGVVGVEGSFTRGDVVAALY-------------------------------HETRTPV 140 (187)
T ss_dssp SEEEEECHHHHHHHHHTCCEEGGGEEEEEECCCTTCEEEEEE-------------------------------TTTTEEE
T ss_pred CcEEEECccHHHHHhCCCCcCCCccEeCCCCcCCCCEEEEEE-------------------------------CCCCeEE
Confidence 339999999999999999999999999999999999999992 2257899
Q ss_pred eecccccccccc----cccccceeeecC
Q 011036 203 GQGTAMMSRAGI----FRASEGIAVDMH 226 (495)
Q Consensus 203 g~GialmSr~el----f~~p~GIaVe~~ 226 (495)
+.|.+.+|..++ ....+|.+++..
T Consensus 141 A~G~~~~ss~ei~~~~~~~~kG~av~v~ 168 (187)
T 2cx0_A 141 MVGVAEVDSSALEKLYREKARGRAVRRV 168 (187)
T ss_dssp EEEEESSCHHHHHHHHHHTCCSEEEEEE
T ss_pred EEEEEecCHHHHhHHHhccCCceEEEEE
Confidence 999999999998 657788877653
No 254
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.32 E-value=4.7e-07 Score=94.96 Aligned_cols=54 Identities=17% Similarity=0.177 Sum_probs=43.2
Q ss_pred CCCeEEEecCC------CChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCAA------PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAa------PGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
++.+|||++|| +||.++.++....+.++|+++|+|+.+. ....+|+++.+|+..
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~d 275 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQND 275 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTC
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccc
Confidence 46899999999 7888988887654578999999999862 134578999998754
No 255
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.31 E-value=3.3e-07 Score=88.92 Aligned_cols=67 Identities=12% Similarity=0.149 Sum_probs=55.9
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
..+..+++.+|++|||++||+|..|..++... ++|+|+|+|+..+..++++++. ..+++++..|+.+
T Consensus 21 ~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~ 87 (244)
T 1qam_A 21 KIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQ 87 (244)
T ss_dssp HHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGG
T ss_pred HHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHh
Confidence 34556778899999999999999999999863 7899999999999988887753 3578888888765
No 256
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.30 E-value=1.4e-06 Score=98.08 Aligned_cols=43 Identities=16% Similarity=0.090 Sum_probs=36.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcC--CCcEEEEEeCChHHHHHH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLR--DEGEVVAVDRSHNKVMDI 302 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~--~~G~ViA~D~s~~kv~~i 302 (495)
.++.+|||.|||+|+....++..++ +...++|+|+++..+..+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LA 364 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELL 364 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHH
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHH
Confidence 4689999999999999999988764 246799999999987766
No 257
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.30 E-value=8.3e-07 Score=95.98 Aligned_cols=83 Identities=19% Similarity=0.199 Sum_probs=61.4
Q ss_pred ccccEEEccccHHHHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCC------------CcEEEEEeCChHHHHHHHHHH
Q 011036 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD------------EGEVVAVDRSHNKVMDIQKLA 306 (495)
Q Consensus 239 ~~G~i~lQ~l~S~v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~------------~G~ViA~D~s~~kv~~i~~~a 306 (495)
+.|.||==..-+.+.+.+++|++|++|+|-|||+||..+..+..+.. +..+++.|++......++-+.
T Consensus 195 ~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 195 DSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp SCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred cCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 45766654445556788999999999999999999999887765533 246999999999887777777
Q ss_pred HHhCCCceEEEEcch
Q 011036 307 AEMGLKCITTYKLDA 321 (495)
Q Consensus 307 ~~~gl~~i~~~~~Da 321 (495)
-..|...-.+...|.
T Consensus 275 ~lhg~~~~~I~~~dt 289 (530)
T 3ufb_A 275 LLHGLEYPRIDPENS 289 (530)
T ss_dssp HHHTCSCCEEECSCT
T ss_pred HhcCCcccccccccc
Confidence 666765434444444
No 258
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.28 E-value=6.9e-06 Score=83.81 Aligned_cols=61 Identities=23% Similarity=0.209 Sum_probs=51.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchh
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~ 322 (495)
..+.+|||++||+|..+..++... +..+++++|. +..+..+++++++.|+. .|++...|++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 239 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLL 239 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEcccc
Confidence 456799999999999999999875 3469999999 89999999998888874 5888888763
No 259
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.26 E-value=1.9e-06 Score=86.58 Aligned_cols=39 Identities=26% Similarity=0.254 Sum_probs=34.1
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~ 301 (495)
+|.+|||++||+|+.|..+++. +.++|+|+|.|+.++..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~ 123 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVW 123 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCH
T ss_pred cccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHH
Confidence 5889999999999999988885 45799999999988754
No 260
>1iq8_A Archaeosine tRNA-guanine transglycosylase; (alpha/beta)8 barrel, riken structural genomics/proteomics initiative, RSGI; 2.20A {Pyrococcus horikoshii} SCOP: b.122.1.1 c.1.20.1 d.17.6.1 PDB: 1it7_A* 1it8_A* 1j2b_A
Probab=98.25 E-value=7.8e-07 Score=97.23 Aligned_cols=74 Identities=20% Similarity=0.298 Sum_probs=67.6
Q ss_pred CCCeEEEccchHHHHHcccccccCceeeccCCccCCCeEEEEEcccCCcCCCCCccccccccccccCCCCCCcccCCCce
Q 011036 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (495)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGIl~~~~~i~~Gd~VaV~~~l~~~~~~~~w~~~~~rg~~l~~~~~~~~~~~r~~l~ 201 (495)
..+.|+||++|++||++||+|++|||++++.++++||.|+|+ +.++..
T Consensus 506 ~~g~v~VD~gA~~av~~GasLl~~GV~~~~g~f~~Gd~V~V~--------------------------------~~~g~~ 553 (582)
T 1iq8_A 506 PRMRVVVNKEAEPFARKGKDVFAKFVIFADPGIRPYDEVLVV--------------------------------NENDEL 553 (582)
T ss_dssp TTTEEEECTTTHHHHHTTCCEEGGGEEEECTTCCTTCEEEEE--------------------------------CTTCCE
T ss_pred CCCEEEECchHHHHHhcCCCcCCCceEecCCCcCCCCEEEEE--------------------------------eCCCCE
Confidence 347999999999999999999999999999999999999999 346789
Q ss_pred EeecccccccccccccccceeeecCC
Q 011036 202 IGQGTAMMSRAGIFRASEGIAVDMHN 227 (495)
Q Consensus 202 Vg~GialmSr~elf~~p~GIaVe~~~ 227 (495)
||.|++.+|.+++.+..+|++|++..
T Consensus 554 ia~G~a~~ss~ei~~~~kG~aV~v~~ 579 (582)
T 1iq8_A 554 LATGQALLSGREMIVFQYGRAVKVRK 579 (582)
T ss_dssp EEEEEESSCHHHHHHCCSSEEEEEEE
T ss_pred EEEEEEeeCHHHHHhcCCceEEEEEe
Confidence 99999999999999889999998753
No 261
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.25 E-value=1.1e-06 Score=86.62 Aligned_cols=43 Identities=7% Similarity=-0.041 Sum_probs=36.0
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a 306 (495)
.+.+|||++||.|+-+..++.. + ++|+++|+++..+..+++++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~ 114 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFF 114 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTS
T ss_pred CCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHH
Confidence 4579999999999999888775 4 89999999999887666543
No 262
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.23 E-value=5.1e-06 Score=81.97 Aligned_cols=61 Identities=16% Similarity=0.123 Sum_probs=46.6
Q ss_pred CCCCeEEEecCCC---ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 260 QKGERILDMCAAP---GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 260 qpGerVLDmCAaP---GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
++..+|||++||+ |..+..++. ..+.++|+++|.|+.++..+++++.. ...++++..|+..
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~-~~p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~ 139 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQS-VNPDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRD 139 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHH-HCTTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTC
T ss_pred cCCCEEEEECCCCCCCChHHHHHHH-hCCCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCC
Confidence 3458999999999 976544444 34558999999999999988887743 3468888888754
No 263
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.20 E-value=9.2e-07 Score=83.06 Aligned_cols=46 Identities=15% Similarity=0.092 Sum_probs=36.4
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
+.+|||++||+|..+..++.. +++|.|...+..++++ .+.++..|+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-------~~~~~~~d~ 93 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-------GVFVLKGTA 93 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-------TCEEEECBT
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-------CCEEEEccc
Confidence 889999999999998876542 8999999988766654 456666654
No 264
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.16 E-value=1.5e-06 Score=84.01 Aligned_cols=41 Identities=24% Similarity=0.266 Sum_probs=34.6
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~ 303 (495)
+|.+|||++||+|+.|..+++. +..+|+|+|.|+.++...+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~~ml~~a~ 77 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN--GAKLVYALDVGTNQLAWKI 77 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSCCCCCHHH
T ss_pred CCCEEEEEccCCCHHHHHHHhc--CCCEEEEEcCCHHHHHHHH
Confidence 4779999999999999999885 3359999999998876543
No 265
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.13 E-value=1.4e-05 Score=78.62 Aligned_cols=57 Identities=18% Similarity=0.026 Sum_probs=47.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
.+..+|||++||.|-.+..++ ++..++|+|+|+.++..+++++..+| ....+...|.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g-~~~~~~v~D~ 160 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKD-WDFTFALQDV 160 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTT-CEEEEEECCT
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcC-CCceEEEeec
Confidence 457799999999997765544 67899999999999999999999988 4466777665
No 266
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.11 E-value=2.8e-06 Score=84.52 Aligned_cols=45 Identities=18% Similarity=0.121 Sum_probs=34.0
Q ss_pred CCCeEEEecCCCCh----HHHHHHHhcCC---CcEEEEEeCChHHHHHHHHH
Q 011036 261 KGERILDMCAAPGG----KTTAIASLLRD---EGEVVAVDRSHNKVMDIQKL 305 (495)
Q Consensus 261 pGerVLDmCAaPGg----KT~~iA~lm~~---~G~ViA~D~s~~kv~~i~~~ 305 (495)
++.+|||+|||+|- .+..+++.++. ..+|+|+|+|...+..+++.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~ 156 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSG 156 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHT
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhc
Confidence 45799999999998 34445554442 24899999999999877664
No 267
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.11 E-value=1.1e-06 Score=81.87 Aligned_cols=40 Identities=10% Similarity=0.047 Sum_probs=30.6
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChH
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~ 297 (495)
+...+....++.+|||++||+|..+..++ .+|+++|.|..
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~ 97 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL 97 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS
T ss_pred HHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC
Confidence 33334445678999999999998776652 68999999986
No 268
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.11 E-value=9.7e-07 Score=91.25 Aligned_cols=47 Identities=9% Similarity=0.003 Sum_probs=38.8
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHH
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~ 304 (495)
..++++++.+|||++||+|..+..++.. ..+|+++|.|...+..+++
T Consensus 101 ~~~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~ 147 (416)
T 4e2x_A 101 ATELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKARE 147 (416)
T ss_dssp HTTTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHT
T ss_pred HHhCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHH
Confidence 4456788999999999999999998874 3499999999988865543
No 269
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.08 E-value=6.6e-06 Score=82.34 Aligned_cols=65 Identities=15% Similarity=0.161 Sum_probs=54.6
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~ 324 (495)
+...|+++||..+||+++|.||.|..|+.. .|.|+|+|+++..+..+++ ++. ..+++++.|....
T Consensus 14 ~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l 78 (285)
T 1wg8_A 14 ALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHL 78 (285)
T ss_dssp HHHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGH
T ss_pred HHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchH
Confidence 456788999999999999999999999986 5899999999999987766 433 5688888887553
No 270
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.06 E-value=8.6e-06 Score=80.04 Aligned_cols=66 Identities=26% Similarity=0.331 Sum_probs=57.3
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.+..+++++|++|||++||+|..|..|+.. .++|+|+|+++..+..++++++. ..+++++..|+++
T Consensus 21 iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~ 86 (255)
T 3tqs_A 21 IVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQ 86 (255)
T ss_dssp HHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTT
T ss_pred HHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHh
Confidence 456678899999999999999999998874 27999999999999999888765 4679999999876
No 271
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.05 E-value=1e-05 Score=82.82 Aligned_cols=67 Identities=18% Similarity=0.218 Sum_probs=55.6
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
+...|+++||..++|+|+|-||.|..|+..++++|.|+|+|+++..+...+ ++.-..++++..+...
T Consensus 49 vl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~----rL~~~Rv~lv~~nF~~ 115 (347)
T 3tka_A 49 AVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK----TIDDPRFSIIHGPFSA 115 (347)
T ss_dssp HHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT----TCCCTTEEEEESCGGG
T ss_pred HHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH----hhcCCcEEEEeCCHHH
Confidence 567788999999999999999999999999988999999999999887653 3333567777776544
No 272
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.05 E-value=2e-05 Score=75.13 Aligned_cols=60 Identities=20% Similarity=0.158 Sum_probs=50.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC---CceEEEEcchhH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL---KCITTYKLDALK 323 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl---~~i~~~~~Da~~ 323 (495)
++..+||+.++ |.-|..+|.+ . .|+|+++|.++.....++++.++.|+ ++|+.+.+|+.+
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~ 91 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGP 91 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSS
T ss_pred hCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchh
Confidence 35679999997 6777777774 3 59999999999999999999999995 579999998754
No 273
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.04 E-value=3.5e-06 Score=84.67 Aligned_cols=36 Identities=19% Similarity=0.147 Sum_probs=30.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCCh
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~ 296 (495)
++|.+|||+||||||+|..+++.+ +...|+++|+..
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~ 115 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGI 115 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEecc
Confidence 579999999999999999998865 345788999874
No 274
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.03 E-value=5.7e-06 Score=83.74 Aligned_cols=43 Identities=21% Similarity=0.129 Sum_probs=35.5
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCCh
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~ 296 (495)
....++..++.+|||++||+|..+..++.... ..+++++|.++
T Consensus 176 ~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~~~ 218 (348)
T 3lst_A 176 LARAGDFPATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDRAE 218 (348)
T ss_dssp HHHHSCCCSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEECHH
T ss_pred HHHhCCccCCceEEEECCccCHHHHHHHHHCC-CCEEEEecCHH
Confidence 34456778899999999999999999998764 56899999953
No 275
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.97 E-value=4.1e-05 Score=76.29 Aligned_cols=37 Identities=16% Similarity=0.163 Sum_probs=30.3
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCCh
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~ 296 (495)
.+++.+|||+||||||++..++..+ +.+.|+|+|++.
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGv 108 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGR 108 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEec
Confidence 4678899999999999998877654 456888988873
No 276
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.95 E-value=1.8e-05 Score=79.04 Aligned_cols=62 Identities=23% Similarity=0.115 Sum_probs=50.8
Q ss_pred CCeEEEecCCC--ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAP--GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaP--GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
-.+|||++||. ++-+..+|+...+..+|+++|.|+.++...++++...+...+.++..|...
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~ 142 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLD 142 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTC
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccC
Confidence 36899999997 677888888776778999999999999988887765444468888888754
No 277
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.95 E-value=1.8e-05 Score=78.63 Aligned_cols=58 Identities=14% Similarity=0.074 Sum_probs=49.0
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
-.+|||++||.|=.+..++.+ .+..+++|+|+++.+++.++++++.+|+. ..+...|.
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~-~p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~ 190 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGL-PAETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADL 190 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTC-CTTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCT
T ss_pred CceeeeeccCccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeee
Confidence 569999999999888776653 36789999999999999999999999987 56666664
No 278
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.90 E-value=2.3e-05 Score=77.22 Aligned_cols=38 Identities=5% Similarity=0.002 Sum_probs=30.6
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhc------CC-----CcEEEEEeCCh
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLL------RD-----EGEVVAVDRSH 296 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm------~~-----~G~ViA~D~s~ 296 (495)
.+++.+|||+|.|.|--+..+++.. .+ ...++++|+.+
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p 106 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFP 106 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCc
Confidence 4567799999999999888877754 33 35899999887
No 279
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.88 E-value=5e-06 Score=82.96 Aligned_cols=38 Identities=21% Similarity=0.203 Sum_probs=31.7
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~ 297 (495)
.+|+.+|||+||||||++..++..+ +...|+++|++.+
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d 125 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQ 125 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccC
Confidence 4688999999999999998877655 4568999999863
No 280
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.81 E-value=3e-05 Score=76.91 Aligned_cols=65 Identities=18% Similarity=0.149 Sum_probs=55.4
Q ss_pred HHHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 252 v~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
-.+..+++++| +|||++||+|..|..++... ++|+|+|+++..+..+++++. -.+++++..|+++
T Consensus 38 ~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l~ 102 (271)
T 3fut_A 38 RIVEAARPFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDALL 102 (271)
T ss_dssp HHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGGG
T ss_pred HHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcC---CCCEEEEECChhh
Confidence 34566788999 99999999999999999852 689999999999998888765 2579999999876
No 281
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.80 E-value=3.9e-05 Score=76.32 Aligned_cols=68 Identities=19% Similarity=0.264 Sum_probs=58.0
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCC-CcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~-~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~ 324 (495)
.+..+++++|++|||++||+|..|..|+..... .++|+|+|+|+..+..+++++ ..+++++..|+++.
T Consensus 34 iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 34 IVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTF 102 (279)
T ss_dssp HHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGC
T ss_pred HHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcC
Confidence 456678899999999999999999999987543 366999999999999998883 45799999999874
No 282
>2q07_A Uncharacterized protein AF0587; monomer, structural genomics, PSI-2, protein structure initiative; 2.04A {Archaeoglobus fulgidus dsm 4304} SCOP: b.122.1.1 c.18.1.4 d.17.6.5
Probab=97.73 E-value=1.4e-05 Score=80.93 Aligned_cols=67 Identities=22% Similarity=0.412 Sum_probs=57.3
Q ss_pred CCeEEEccchHHHHHcccccccCceeeccCCccCCCeEEEEEcccCCcCCCCCccccccccccccCCCCCCcccCCCceE
Q 011036 123 PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYI 202 (495)
Q Consensus 123 ~k~ViVd~~~~eAVLrGA~v~aPGIl~~~~~i~~Gd~VaV~~~l~~~~~~~~w~~~~~rg~~l~~~~~~~~~~~r~~l~V 202 (495)
.+.|+||+ +|+.| +||+|||+.++.++++||.|+|- ++..+
T Consensus 230 ~~~V~Vd~----~v~~G-~v~~pGv~~~~~~i~~gd~V~V~----------------------------------~g~~v 270 (306)
T 2q07_A 230 IYTVEIGD----FEVKG-TIFAGGVLRADEKIRPNDVVVFH----------------------------------NSRIF 270 (306)
T ss_dssp CSEEEECS----SCCCS-EEEGGGEEEECTTCCTTCEEEEE----------------------------------CSSCE
T ss_pred CCEEEEcc----cccCC-ceeCCeeEeCCCCcCCCCEEEEE----------------------------------CCEEE
Confidence 38999998 78899 99999999999999999999883 24688
Q ss_pred eecccccccccccccccceeeecCCc
Q 011036 203 GQGTAMMSRAGIFRASEGIAVDMHNR 228 (495)
Q Consensus 203 g~GialmSr~elf~~p~GIaVe~~~~ 228 (495)
|+|+++||..+|....+|++++....
T Consensus 271 avG~a~ms~~em~~~~kG~aV~v~~~ 296 (306)
T 2q07_A 271 GVGLAAMSGKEMAGSEKGIAINVKRK 296 (306)
T ss_dssp EEEEESSCHHHHSCC--CEEEEEEEE
T ss_pred EEEEEeeCHHHHhhcCCceEEEEEEE
Confidence 99999999999999999999987543
No 283
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.71 E-value=4.4e-06 Score=75.60 Aligned_cols=46 Identities=11% Similarity=0.031 Sum_probs=34.0
Q ss_pred cCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
+..++|++|||+++|. +++|.|+.++..+++.+.. .+++...|+..
T Consensus 8 ~g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~ 53 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQ 53 (176)
T ss_dssp TTCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGG
T ss_pred cCCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc----CcEEEEechhc
Confidence 4578999999999875 2389999998877766432 37777777643
No 284
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.67 E-value=0.00035 Score=71.05 Aligned_cols=68 Identities=16% Similarity=0.058 Sum_probs=51.2
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
...+|..++.+|||+++|+|..+..|+.... .-+++.+|. +..+..+++.++..+...|++..+|.++
T Consensus 172 ~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~ 239 (353)
T 4a6d_A 172 LTAFDLSVFPLMCDLGGGAGALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFK 239 (353)
T ss_dssp HHSSCGGGCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTT
T ss_pred HHhcCcccCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhcccCceeeecCcccc
Confidence 3445677788999999999999999998754 568889998 5667777766655556678888888644
No 285
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.67 E-value=0.00023 Score=72.71 Aligned_cols=55 Identities=13% Similarity=0.122 Sum_probs=40.5
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
..++.+|||++||+|..+..++... +..+++++|. +..+..+++ ...|++..+|+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~ 255 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPA------FSGVEHLGGDM 255 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCT
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhh------cCCCEEEecCC
Confidence 5678899999999999999999876 4568999999 555433221 24566666664
No 286
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.65 E-value=0.00014 Score=78.91 Aligned_cols=61 Identities=18% Similarity=0.094 Sum_probs=54.0
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~ 324 (495)
.+-+|||++||.|-.+..||.+ ..+|+++|.|+..+..++..|++.|..+|.....|+...
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~ 126 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEV 126 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHH
Confidence 4679999999999999999985 368999999999999999999999877899888887653
No 287
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.64 E-value=0.00026 Score=72.29 Aligned_cols=58 Identities=16% Similarity=0.106 Sum_probs=41.9
Q ss_pred hcC-CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 256 ALD-PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 256 ~Ld-pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
.++ ..++.+|||++||+|..+..|+.... ..+++++|. +..+..+++ ...|++..+|+
T Consensus 195 ~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~ 253 (364)
T 3p9c_A 195 LYHGFEGLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDL-PHVISEAPQ------FPGVTHVGGDM 253 (364)
T ss_dssp HCCTTTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------CTTEEEEECCT
T ss_pred hcccccCCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecC-HHHHHhhhh------cCCeEEEeCCc
Confidence 344 67789999999999999999998763 468999999 554432221 24566666665
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.64 E-value=0.0002 Score=71.59 Aligned_cols=62 Identities=11% Similarity=0.097 Sum_probs=52.1
Q ss_pred CeEEEecCCCChHHHHHHHhcC----CCcEEEEEeCCh--------------------------HHHHHHHHHHHHhCC-
Q 011036 263 ERILDMCAAPGGKTTAIASLLR----DEGEVVAVDRSH--------------------------NKVMDIQKLAAEMGL- 311 (495)
Q Consensus 263 erVLDmCAaPGgKT~~iA~lm~----~~G~ViA~D~s~--------------------------~kv~~i~~~a~~~gl- 311 (495)
..||.++.+-|+-+.++|..+. ..++|+++|... .++..+++++++.|+
T Consensus 108 g~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl~ 187 (282)
T 2wk1_A 108 GDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDLL 187 (282)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTCC
T ss_pred CcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCCC
Confidence 4999999999999999998774 368999999631 146778999999998
Q ss_pred -CceEEEEcchhHH
Q 011036 312 -KCITTYKLDALKA 324 (495)
Q Consensus 312 -~~i~~~~~Da~~~ 324 (495)
+.|+.+++|+.+.
T Consensus 188 ~~~I~li~Gda~et 201 (282)
T 2wk1_A 188 DEQVRFLPGWFKDT 201 (282)
T ss_dssp STTEEEEESCHHHH
T ss_pred cCceEEEEeCHHHH
Confidence 6799999999775
No 289
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.62 E-value=7.5e-05 Score=77.39 Aligned_cols=55 Identities=25% Similarity=0.260 Sum_probs=41.2
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
+++|++|||++|||||+|..++.. .+.|+|+|+.+-. . ..+....|+.+..|+++
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l~-----~--~l~~~~~V~~~~~d~~~ 263 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPMA-----Q--SLMDTGQVTWLREDGFK 263 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCCC-----H--HHHTTTCEEEECSCTTT
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhcC-----h--hhccCCCeEEEeCcccc
Confidence 578999999999999999998874 4799999987421 1 11234567777777654
No 290
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.59 E-value=6.6e-05 Score=76.58 Aligned_cols=55 Identities=15% Similarity=0.049 Sum_probs=40.7
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
..++.+|||++||+|..+..++... +..+++++|. +..+..+++ ...|++...|+
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~ 261 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPP------LSGIEHVGGDM 261 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCT
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCc
Confidence 5678899999999999999999875 3578999999 666543322 23466666654
No 291
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.48 E-value=0.00015 Score=73.31 Aligned_cols=56 Identities=18% Similarity=0.152 Sum_probs=40.7
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
+..++.+|||++||+|..+..++.... ..+++++|. +..+..+++ ...|++...|+
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~ 240 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSG------SNNLTYVGGDM 240 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------BTTEEEEECCT
T ss_pred ccccCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhccc------CCCcEEEeccc
Confidence 345678999999999999999998753 468999999 766543322 23366666554
No 292
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.44 E-value=0.00011 Score=71.88 Aligned_cols=67 Identities=16% Similarity=0.251 Sum_probs=53.4
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~ 324 (495)
.+..+++++|++|||++||+|..|. ++. ..+++|+|+|+++..+..++++++.. .+++++..|+++.
T Consensus 13 iv~~~~~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 13 IVSAINPQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTF 79 (252)
T ss_dssp HHHHHCCCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGC
T ss_pred HHHhcCCCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhC
Confidence 3456688999999999999999999 653 22234999999999998887766532 5799999999873
No 293
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.43 E-value=8.8e-05 Score=72.37 Aligned_cols=66 Identities=15% Similarity=0.263 Sum_probs=55.3
Q ss_pred HHhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 011036 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (495)
Q Consensus 253 ~~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~ 324 (495)
.+..+++++|++|||+|||+|..|..++.. +.++|+|+|+|+..+..++++ +..+++++..|+++.
T Consensus 23 iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 23 IAEELNIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI----GDERLEVINEDASKF 88 (249)
T ss_dssp HHHHTTCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTC
T ss_pred HHHhcCCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhC
Confidence 456678889999999999999999988874 347999999999999887766 345789999999774
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.41 E-value=0.00014 Score=71.02 Aligned_cols=39 Identities=21% Similarity=0.179 Sum_probs=32.0
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChH
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~ 297 (495)
..+||.+|||++|||||++...+.+- +..+|+|+|+-..
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~-g~~~V~avdvG~~ 113 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLK-KVTEVRGYTKGGP 113 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTST-TEEEEEEECCCST
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhc-CCCEEEEEecCCC
Confidence 35789999999999999998777654 4458999999753
No 295
>2p38_A Protein involved in ribosomal biogenesis; two alpha/beta domains, PUA domain, biosynthetic protein; 1.80A {Pyrococcus abyssi}
Probab=97.19 E-value=0.00051 Score=63.59 Aligned_cols=54 Identities=20% Similarity=0.116 Sum_probs=49.7
Q ss_pred CCeEEEccchHHHHHcccccccCceeeccCCccCCCeEEEEEcccCCcCCCCCccccccccccccCCCCCCcccCCCceE
Q 011036 123 PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYI 202 (495)
Q Consensus 123 ~k~ViVd~~~~eAVLrGA~v~aPGIl~~~~~i~~Gd~VaV~~~l~~~~~~~~w~~~~~rg~~l~~~~~~~~~~~r~~l~V 202 (495)
...|+|+.++...+|.|+||+.|||...+ +..||.|.|+ +.++.++
T Consensus 95 k~kV~V~~~ae~~flyG~dV~k~gI~~~~--~~~~~~VvV~--------------------------------~~~~~pL 140 (166)
T 2p38_A 95 KNYVILGPKASFLFTTGKDAPKEAVREIK--WQGSKRVVVL--------------------------------NDLGDII 140 (166)
T ss_dssp SSEEEECHHHHHHHHTTCCBCGGGEEEEE--CSSCSEEEEE--------------------------------CTTSCEE
T ss_pred ccEEEECCcceEeeecCCCcchhcceEEe--ecCCCEEEEE--------------------------------ECCCcEE
Confidence 45899999999999999999999999999 9999999999 4478899
Q ss_pred eecccccc
Q 011036 203 GQGTAMMS 210 (495)
Q Consensus 203 g~GialmS 210 (495)
|.|.+.+|
T Consensus 141 G~G~a~~s 148 (166)
T 2p38_A 141 GIGLINPK 148 (166)
T ss_dssp EEEEECTT
T ss_pred EEEEEEEC
Confidence 99999887
No 296
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.11 E-value=0.00017 Score=72.07 Aligned_cols=60 Identities=8% Similarity=-0.037 Sum_probs=49.4
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHHHH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~~~ 326 (495)
+..+||++||+|..+..+.+ +..+++.+|.++..+..|++|++. ...+++++.|+.+.+.
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~ 151 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR---SQDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLN 151 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC---TTSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHH
T ss_pred CCCceeEeCCcHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHH
Confidence 56799999999988776443 457999999999999999999875 3569999999988653
No 297
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.08 E-value=0.00077 Score=68.20 Aligned_cols=55 Identities=16% Similarity=0.161 Sum_probs=38.9
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
..++.+|||++||+|..+..++.... ..+++++|. +..+..+++ ...|++...|+
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~ 245 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQ-PQVVGNLTG------NENLNFVGGDM 245 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEEC-HHHHSSCCC------CSSEEEEECCT
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEecc-HHHHhhccc------CCCcEEEeCcc
Confidence 34678999999999999999998763 468999999 455432221 23455555554
No 298
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.03 E-value=0.0011 Score=66.76 Aligned_cols=37 Identities=22% Similarity=0.269 Sum_probs=28.5
Q ss_pred cCCCCCCeEEEecC------CCChHHHHHHHhcCCC-cEEEEEeCCh
Q 011036 257 LDPQKGERILDMCA------APGGKTTAIASLLRDE-GEVVAVDRSH 296 (495)
Q Consensus 257 LdpqpGerVLDmCA------aPGgKT~~iA~lm~~~-G~ViA~D~s~ 296 (495)
|.+--|++|||++| |||+ ..+.++ .++ +.|+++|+.+
T Consensus 105 ~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~-~p~g~~VVavDL~~ 148 (344)
T 3r24_A 105 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQW-LPTGTLLVDSDLND 148 (344)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHH-SCTTCEEEEEESSC
T ss_pred EeecCCCEEEeCCCCCCCCCCCcH--HHHHHh-CCCCcEEEEeeCcc
Confidence 34456999999997 9999 345555 555 5999999986
No 299
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.97 E-value=0.0018 Score=65.05 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=31.7
Q ss_pred CCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChH
Q 011036 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~ 297 (495)
..+||.+|||++|||||++...+.+ .+..+|+|+|+-..
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~-~gv~~V~avdvG~~ 129 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQ-KRVQEVRGYTKGGP 129 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTC-TTEEEEEEECCCST
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhh-cCCCEEEEEEcCCC
Confidence 3568899999999999999876664 44458999999864
No 300
>3u28_A H/ACA ribonucleoprotein complex subunit 4; pseudouridine synthase, pseudouridylation, H/ACA RNA; 1.90A {Saccharomyces cerevisiae} PDB: 3uai_A
Probab=96.97 E-value=0.00069 Score=70.64 Aligned_cols=74 Identities=22% Similarity=0.351 Sum_probs=66.9
Q ss_pred CCCeEEEccchHHHHHcccccccCceeeccCCccCCCeEEEEEcccCCcCCCCCccccccccccccCCCCCCcccCCCce
Q 011036 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (495)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGIl~~~~~i~~Gd~VaV~~~l~~~~~~~~w~~~~~rg~~l~~~~~~~~~~~r~~l~ 201 (495)
+.+.|+|+...++++++|+.|++||++..+.+++.||.|.|+ ..++.+
T Consensus 265 ~lp~V~L~deaa~~V~NGq~L~~pgVl~~~~~i~~gd~VvVv--------------------------------t~kGel 312 (400)
T 3u28_A 265 GYKRIVVKDSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLI--------------------------------TTKGEA 312 (400)
T ss_dssp TSCEEEECHHHHHHHHHHSEEEGGGEEEECTTCCTTCEEEEE--------------------------------CTTCCE
T ss_pred hCCccccCHHHHHHHHCcCccccCccccccccCCCCCEEEEE--------------------------------eCCCcE
Confidence 568899999999999999999999999998889999999998 346789
Q ss_pred EeecccccccccccccccceeeecCC
Q 011036 202 IGQGTAMMSRAGIFRASEGIAVDMHN 227 (495)
Q Consensus 202 Vg~GialmSr~elf~~p~GIaVe~~~ 227 (495)
|+.|++.|+.+++....+|++++...
T Consensus 313 LAIG~A~mss~em~~~~~G~vvk~~r 338 (400)
T 3u28_A 313 IAVAIAQMSTVDLASCDHGVVASVKR 338 (400)
T ss_dssp EEEEEESSCHHHHHHCSSSEEEEEEE
T ss_pred EEEEEEEeCHHHHhhcCCcEEEEEEE
Confidence 99999999999999999999887654
No 301
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=96.94 E-value=0.0029 Score=63.52 Aligned_cols=69 Identities=7% Similarity=-0.001 Sum_probs=49.3
Q ss_pred HhhcCCCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhC-----CCceEEEEcchhHH
Q 011036 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG-----LKCITTYKLDALKA 324 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~g-----l~~i~~~~~Da~~~ 324 (495)
+..+.|.| .+||=++.|-|+-.-.++..- +-.+|+.+|+++.-++..++....+. -..++++..|+.+.
T Consensus 77 ~l~~~p~p-k~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~ 150 (294)
T 3o4f_A 77 PLLAHGHA-KHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF 150 (294)
T ss_dssp HHHHSSCC-CEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTT
T ss_pred HHhhCCCC-CeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHH
Confidence 33445554 689999999999888777642 34589999999999888887765432 13467777776553
No 302
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.89 E-value=0.0026 Score=66.05 Aligned_cols=63 Identities=19% Similarity=0.274 Sum_probs=44.5
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhC---C-----CceEEEEcchhHHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG---L-----KCITTYKLDALKAV 325 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~g---l-----~~i~~~~~Da~~~~ 325 (495)
+..+||=++.|-|+-...+... +..+|+.+|+++.-++..++....+. + ..++++..|+.+.+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh--~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl 275 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL--KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVL 275 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT--CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhc--CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHH
Confidence 4589999999999988877663 34689999999988877666532211 1 23667777776654
No 303
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=96.73 E-value=0.0017 Score=72.24 Aligned_cols=62 Identities=15% Similarity=0.089 Sum_probs=45.6
Q ss_pred CCeEEEecCCCChHHHHHHHhc---C---------CCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchhHH
Q 011036 262 GERILDMCAAPGGKTTAIASLL---R---------DEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKA 324 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm---~---------~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~~ 324 (495)
+..|||++||.|-.....+... + .+.+|+|+|.|.+.+..++...+ +|+.. |++++.|+.+.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev 484 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSL 484 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhc
Confidence 3479999999999875432222 1 23499999999988876666655 78765 99999998653
No 304
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=96.63 E-value=0.0016 Score=71.83 Aligned_cols=60 Identities=13% Similarity=0.037 Sum_probs=44.3
Q ss_pred CeEEEecCCCChH---HHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc-eEEEEcchhH
Q 011036 263 ERILDMCAAPGGK---TTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (495)
Q Consensus 263 erVLDmCAaPGgK---T~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~-i~~~~~Da~~ 323 (495)
..|||++||.|-- +...++..+.+-+|+|+|.|+.. ...+++.+.+|+.. |++++.|+.+
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A-~~a~~~v~~N~~~dkVtVI~gd~ee 422 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNA-VVTLENWQFEEWGSQVTVVSSDMRE 422 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHH-HHHHHHHHHHTTGGGEEEEESCTTT
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHH-HHHHHHHHhccCCCeEEEEeCccee
Confidence 4699999999977 44444443333489999999864 45677788889865 8899888643
No 305
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.31 E-value=0.013 Score=60.43 Aligned_cols=54 Identities=13% Similarity=0.051 Sum_probs=39.7
Q ss_pred CeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 263 erVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.+|||+|||.||.+..+... +--.|+|+|+++..+...+.|. ....++..|..+
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~ 56 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSL 56 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGG
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhh
Confidence 48999999999999887663 2235779999999988777663 234455666543
No 306
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=96.24 E-value=0.0041 Score=64.19 Aligned_cols=63 Identities=22% Similarity=0.476 Sum_probs=55.7
Q ss_pred CCCeEEEccchHHHHH-cccccccCceeeccCCccCCCeEEEEEcccCCcCCCCCccccccccccccCCCCCCcccCCCc
Q 011036 122 PPKEVIVSRKCAEAVL-RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGL 200 (495)
Q Consensus 122 ~~k~ViVd~~~~eAVL-rGA~v~aPGIl~~~~~i~~Gd~VaV~~~l~~~~~~~~w~~~~~rg~~l~~~~~~~~~~~r~~l 200 (495)
....|+||..|++|+. +|+.+..|||++.+..|+.||.|.|. +..+.
T Consensus 274 ~~G~v~vD~gA~~al~~~g~sLl~~Gi~~v~g~F~~gd~V~i~--------------------------------~~~g~ 321 (367)
T 2j5v_A 274 PAGEITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRIC--------------------------------NLEGR 321 (367)
T ss_dssp CSCEEEECHHHHHHHHHHCCCBCGGGEEEEESCCCTTCEEEEE--------------------------------ETTCC
T ss_pred CCCEEEECcCHHHHHHhCCCccCCcccEEEECcccCCCEEEEE--------------------------------CCCCC
Confidence 4568999999999998 79999999999999999999999999 33567
Q ss_pred eEeecccccccccccc
Q 011036 201 YIGQGTAMMSRAGIFR 216 (495)
Q Consensus 201 ~Vg~GialmSr~elf~ 216 (495)
.|+.|.+..+..++-+
T Consensus 322 ~ia~G~~~y~s~e~~~ 337 (367)
T 2j5v_A 322 DIAHGVSRYNSDALRR 337 (367)
T ss_dssp EEEEEECSSCHHHHHH
T ss_pred EEEEEEecCCHHHHHH
Confidence 8999999999888753
No 307
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.10 E-value=0.012 Score=59.75 Aligned_cols=45 Identities=18% Similarity=0.124 Sum_probs=35.4
Q ss_pred CeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHH
Q 011036 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAA 307 (495)
Q Consensus 263 erVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~ 307 (495)
.+|||++||.||.+..+...-.+-..|+|+|.++..+...+.|..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~ 47 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP 47 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc
Confidence 479999999999998887641011379999999999988887753
No 308
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.95 E-value=0.048 Score=54.89 Aligned_cols=54 Identities=26% Similarity=0.297 Sum_probs=38.1
Q ss_pred hhcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
+..++++|++||-.+||+ |--+.++|..++ ..+|+++|++..|++ +++++|.+.
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~----~a~~lGa~~ 219 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLS----KAKEIGADL 219 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHH----HHHHTTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHH----HHHHhCCCE
Confidence 345789999999988643 334455555543 348999999998875 456678763
No 309
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.69 E-value=0.026 Score=55.82 Aligned_cols=60 Identities=17% Similarity=0.117 Sum_probs=44.7
Q ss_pred ccHHHHHhhcC--CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhC
Q 011036 248 LPSIVTAHALD--PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG 310 (495)
Q Consensus 248 l~S~v~~~~Ld--pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~g 310 (495)
.|-.++..++. -.+|+.|||.+||+|..+..++. ++ ..++++|+++..+..+++++++..
T Consensus 220 ~p~~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~-~g--~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 220 FPLELAERLVRMFSFVGDVVLDPFAGTGTTLIAAAR-WG--RRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp SCHHHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHH-TT--CEEEEEESCHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHH-cC--CeEEEEeCCHHHHHHHHHHHHHhc
Confidence 34444444332 26899999999999976665544 32 589999999999999999988763
No 310
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.67 E-value=0.017 Score=57.10 Aligned_cols=62 Identities=18% Similarity=0.185 Sum_probs=36.3
Q ss_pred CCCCccEEEEcCCCCCCCCcccchhhhhcHHHHHHhHHHHHHHHHHHHhcCCCCCEEEEEeC
Q 011036 422 SPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTC 483 (495)
Q Consensus 422 ~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~a~~Qrrll~~A~~lLkpGG~LVYSTC 483 (495)
++++||.|+.|||.-...-............+-..+....++++.+|.++|||||.|+....
T Consensus 37 ~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 37 PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 35689999999998543210000000001111222223356789999999999999987654
No 311
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.57 E-value=0.025 Score=57.24 Aligned_cols=44 Identities=20% Similarity=0.155 Sum_probs=35.9
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAA 307 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~ 307 (495)
+-+|||+|||.||.+..+... +--.|+|+|+++..+...+.|..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~ 54 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFG 54 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHS
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcC
Confidence 568999999999999887653 33468899999999888877753
No 312
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.51 E-value=0.044 Score=54.70 Aligned_cols=53 Identities=23% Similarity=0.255 Sum_probs=40.0
Q ss_pred hhcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
....+++|++||-.+||+ |..+.++|..++ .+|+++|++..|.+ .++++|.+.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~----~~~~lGa~~ 213 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLN----LARRLGAEV 213 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHH----HHHHTTCSE
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHH----HHHHcCCCE
Confidence 345789999999988765 566667777664 38999999999875 456678753
No 313
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.40 E-value=0.038 Score=57.43 Aligned_cols=64 Identities=14% Similarity=0.137 Sum_probs=53.8
Q ss_pred cCCCCCCeEEEecCCCChHHHHHH-HhcCCCcEEEEEeCChHHHHHHHHHHHH---hCC-CceEEEEcc
Q 011036 257 LDPQKGERILDMCAAPGGKTTAIA-SLLRDEGEVVAVDRSHNKVMDIQKLAAE---MGL-KCITTYKLD 320 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~~iA-~lm~~~G~ViA~D~s~~kv~~i~~~a~~---~gl-~~i~~~~~D 320 (495)
+.+++|+.|+|++|.-|..|..+| .+.++.++|+|+|.++.-...++++++. .++ ++++++..-
T Consensus 222 ~~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~a 290 (409)
T 2py6_A 222 LRFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCG 290 (409)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSE
T ss_pred cccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeE
Confidence 346899999999999999999888 4555558999999999999999999998 356 778777654
No 314
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.39 E-value=0.044 Score=54.79 Aligned_cols=52 Identities=21% Similarity=0.259 Sum_probs=38.0
Q ss_pred CCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCce
Q 011036 258 DPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314 (495)
Q Consensus 258 dpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i 314 (495)
.+++|++||=.+||+ |.-+.++|..++ ..+|+++|.+..|++ +++++|.+.+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~----~~~~lGa~~~ 220 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLA----LAREVGADAA 220 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHH----HHHHTTCSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHH----HHHHcCCCEE
Confidence 678999999997644 444555666553 359999999999975 5566887643
No 315
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.27 E-value=0.023 Score=58.26 Aligned_cols=53 Identities=23% Similarity=0.311 Sum_probs=39.3
Q ss_pred hhcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
+..++++|++||-.+||+ |..+.++|..++ ..+|+++|++..|++ .++++|.+
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~----~a~~lGa~ 232 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLK----LLSDAGFE 232 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHH----HHHTTTCE
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHH----HHHHcCCc
Confidence 445789999999998755 555666776654 348999999999875 45567763
No 316
>1sqw_A Saccharomyces cerevisiae NIP7P homolog; PUA, unknown function; 1.90A {Homo sapiens} SCOP: b.122.1.1 d.17.6.3 PDB: 1t5y_A
Probab=95.27 E-value=0.024 Score=53.36 Aligned_cols=71 Identities=18% Similarity=0.181 Sum_probs=62.3
Q ss_pred CCCeEEEccchHHHHHcccccccCceeeccCCccCCCeEEEEEcccCCcCCCCCccccccccccccCCCCCCcccCCCce
Q 011036 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (495)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGIl~~~~~i~~Gd~VaV~~~l~~~~~~~~w~~~~~rg~~l~~~~~~~~~~~r~~l~ 201 (495)
....|+|...+...++-|=|||.-+|..+++++..||.|.|+ +.++.+
T Consensus 93 ~~~kV~Vk~~~E~~flyG~nVfk~~V~~i~e~i~~~~~VvV~--------------------------------n~~d~p 140 (188)
T 1sqw_A 93 AKYKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVY--------------------------------SMADIP 140 (188)
T ss_dssp CSCEEEECHHHHHHHTTTCCEEGGGEEEECTTCCTTCEEEEE--------------------------------ETTCCE
T ss_pred cCcEEEECCCceeeEEeccchhHHhhhhcCCCCCCCCEEEEE--------------------------------eCCCCE
Confidence 447899999999999999999999999999999999999999 567899
Q ss_pred Eeecccccccccccc-cccceeee
Q 011036 202 IGQGTAMMSRAGIFR-ASEGIAVD 224 (495)
Q Consensus 202 Vg~GialmSr~elf~-~p~GIaVe 224 (495)
+|.|.+..|..++.. .|.++.+.
T Consensus 141 LG~G~a~~s~~e~~~~~~~~~vv~ 164 (188)
T 1sqw_A 141 LGFGVAAKSTQDCRKVDPMAIVVF 164 (188)
T ss_dssp EEEEEESSCHHHHHHSCTTSEEEE
T ss_pred EEEEEeecCHHHHHhcCCCcEEEE
Confidence 999999999888776 45566543
No 317
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.08 E-value=0.082 Score=52.64 Aligned_cols=54 Identities=22% Similarity=0.255 Sum_probs=39.1
Q ss_pred hhcCCCCCCeEEEecCCCCh-HHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 255 HALDPQKGERILDMCAAPGG-KTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGg-KT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
+...++||++||=.+||++| .+.++|..++ ..+|+++|.+++|+ ++++++|.+.
T Consensus 157 ~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~----~~~~~~Ga~~ 211 (348)
T 4eez_A 157 KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKL----NLAKKIGADV 211 (348)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHH----HHHHHTTCSE
T ss_pred cccCCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHh----hhhhhcCCeE
Confidence 34578999999999887754 3444444443 46999999999986 4667788764
No 318
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.05 E-value=0.1 Score=52.26 Aligned_cols=52 Identities=25% Similarity=0.267 Sum_probs=36.2
Q ss_pred hhcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
+..++++|++||-.+||+ |-.+.++|..++ .+|+++|++..|++ .++++|.+
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~----~~~~lGa~ 214 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLE----VAKNCGAD 214 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHH----HHHHTTCS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHH----HHHHhCCC
Confidence 445789999999988643 333445555543 35999999999875 44567876
No 319
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.02 E-value=0.045 Score=55.64 Aligned_cols=54 Identities=22% Similarity=0.214 Sum_probs=38.0
Q ss_pred hhcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
....+++|++||=.+||+ |..+.++|.+++ ..+|+++|.+..|.. +++++|.+.
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~----~a~~lGa~~ 230 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRR----LAEEVGATA 230 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHH----HHHHHTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHH----HHHHcCCCE
Confidence 456789999999987643 334445555443 348999999998864 556678763
No 320
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.90 E-value=0.23 Score=49.82 Aligned_cols=50 Identities=18% Similarity=0.162 Sum_probs=33.8
Q ss_pred hhcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHH
Q 011036 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKL 305 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~ 305 (495)
+...+++|++||=.+||+ |..+.++|.+++ ...|+++|.+..|++.++++
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAG-ACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESCHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHh
Confidence 345789999999987633 334445555442 23599999999998665543
No 321
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.88 E-value=0.043 Score=55.11 Aligned_cols=54 Identities=22% Similarity=0.240 Sum_probs=37.3
Q ss_pred hhcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
+...+++|++||=.+||+ |.-+.++|.+++ ..+|+++|.+..|++ +++++|.+.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~----~~~~lGa~~ 214 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCD----IALEYGATD 214 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHH----HHHHHTCCE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHH----HHHHhCCce
Confidence 456789999999997643 333445555442 237999999998874 556678753
No 322
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=94.81 E-value=0.3 Score=50.37 Aligned_cols=45 Identities=22% Similarity=0.249 Sum_probs=33.1
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC--CceEEEEcch
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL--KCITTYKLDA 321 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl--~~i~~~~~Da 321 (495)
..+|+|++|++|.-|..++.. -+..+++..+..|. ..++++..|.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~---------------ii~~i~~~~~~~~~~~pe~~v~~nDL 99 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDF---------------IVKHISKRFDAAGIDPPEFTAFFSDL 99 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHH---------------HHHHHHHHHHHTTCCCCCEEEEEEEC
T ss_pred ceEEEecCCCCChhHHHHHHH---------------HHHHHHHHHhhcCCCCCceeEEecCC
Confidence 589999999999999988764 34556666666554 3577777664
No 323
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.79 E-value=0.056 Score=55.18 Aligned_cols=52 Identities=23% Similarity=0.259 Sum_probs=37.5
Q ss_pred hcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
..++++|++||-.+||+ |..+.++|..++ ...|+++|++..|++ .++++|.+
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~----~a~~lGa~ 232 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLA----HAKAQGFE 232 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHH----HHHHTTCE
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHH----HHHHcCCc
Confidence 45789999999988644 444556666553 347999999999875 45667874
No 324
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.75 E-value=0.13 Score=51.19 Aligned_cols=55 Identities=24% Similarity=0.218 Sum_probs=39.1
Q ss_pred HhhcCCCCCCeEEEecCCCChH-HHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 254 AHALDPQKGERILDMCAAPGGK-TTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 254 ~~~LdpqpGerVLDmCAaPGgK-T~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
.+...+++|++||=.+||+.|- +.++|.+++ ...|+++|.+++|++ +++++|.+.
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~----~a~~lGa~~ 208 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLA----LAKSFGAMQ 208 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHH----HHHHTTCSE
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHH----HHHHcCCeE
Confidence 4456789999999998765443 444555543 457899999999864 667788763
No 325
>2aus_C Pseudouridine synthase; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_A 3lwo_A* 3lwq_A* 3lwp_A 3lwv_A 3hax_A* 2hvy_A* 3hay_A* 2ey4_A 2rfk_A 3mqk_A 3hjw_A* 3hjy_A
Probab=94.71 E-value=0.037 Score=56.44 Aligned_cols=71 Identities=32% Similarity=0.515 Sum_probs=60.0
Q ss_pred CCCeEEEccchHHHHHcccccccCceeeccCCccCCCeEEEEEcccCCcCCCCCccccccccccccCCCCCCcccCCCce
Q 011036 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (495)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGIl~~~~~i~~Gd~VaV~~~l~~~~~~~~w~~~~~rg~~l~~~~~~~~~~~r~~l~ 201 (495)
+.+.|.|+...+.++++|+.+++||+...+.++..|+.|.|+ ..++.+
T Consensus 249 ~~p~V~L~de~a~~V~nGq~L~~~gv~~~~~~i~~gd~V~V~--------------------------------~~~G~f 296 (334)
T 2aus_C 249 HLPKIWIKDSAVAAVAHGANLTVPGIVKLNAGIKKGDLVAIM--------------------------------TLKDEL 296 (334)
T ss_dssp TSCEEEECHHHHHHHHTTCCEEGGGEEEEETTCCTTCEEEEE--------------------------------ETTCCE
T ss_pred cccEEEECHHHHHHHHCCCccccCcccccccccCCCCEEEEE--------------------------------ecCCeE
Confidence 568999999999999999999999988777778889999888 235679
Q ss_pred Eeecccccccccccccccceeee
Q 011036 202 IGQGTAMMSRAGIFRASEGIAVD 224 (495)
Q Consensus 202 Vg~GialmSr~elf~~p~GIaVe 224 (495)
+|.|+..++..++....+|..++
T Consensus 297 LAIGe~~~s~~e~~~~~~G~~vK 319 (334)
T 2aus_C 297 VALGKAMMSTQEMIERSKGIAVD 319 (334)
T ss_dssp EEEEEESSCHHHHHHCSSSEEEE
T ss_pred EEEEEeccCchhccccCCCeEEE
Confidence 99999999988888777776554
No 326
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.66 E-value=0.13 Score=52.04 Aligned_cols=53 Identities=21% Similarity=0.246 Sum_probs=37.8
Q ss_pred hcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
..++++|++||-.+||+ |--+.++|..++ ..+|+++|++..|++ +++++|.+.
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~----~a~~lGa~~ 238 (371)
T 1f8f_A 185 ALKVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLE----LAKQLGATH 238 (371)
T ss_dssp TTCCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHH----HHHHHTCSE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHH----HHHHcCCCE
Confidence 45789999999998654 444556666553 237999999999875 455677653
No 327
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.64 E-value=0.16 Score=51.38 Aligned_cols=53 Identities=13% Similarity=0.085 Sum_probs=36.7
Q ss_pred hcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
..++++|++||=.+||+ |--+.++|..++ ..+|+++|++..|++ +++++|.+.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~----~a~~lGa~~ 239 (373)
T 1p0f_A 186 TAKVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFP----KAIELGATE 239 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHH----HHHHTTCSE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHH----HHHHcCCcE
Confidence 45789999999997543 333445555543 238999999999975 456688753
No 328
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.55 E-value=0.13 Score=51.98 Aligned_cols=52 Identities=15% Similarity=0.100 Sum_probs=36.1
Q ss_pred hcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
..++++|++||-.+||+ |.-+.++|..++ ..+|+++|++..|++ .++++|.+
T Consensus 187 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~----~~~~lGa~ 239 (374)
T 1cdo_A 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFE----KAKVFGAT 239 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHH----HHHHTTCC
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHH----HHHHhCCc
Confidence 45789999999997533 333445555443 237999999999975 45567875
No 329
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.54 E-value=0.17 Score=51.19 Aligned_cols=52 Identities=13% Similarity=0.112 Sum_probs=36.2
Q ss_pred hcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
..++++|++||=.+||+ |..+.++|..++ ..+|+++|++..|++ .++++|.+
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~----~a~~lGa~ 242 (376)
T 1e3i_A 190 TAKVTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFP----KAKALGAT 242 (376)
T ss_dssp TSCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHH----HHHHTTCS
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHH----HHHHhCCc
Confidence 45789999999997543 333444555443 348999999999975 45667875
No 330
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.47 E-value=0.18 Score=51.03 Aligned_cols=52 Identities=15% Similarity=0.141 Sum_probs=36.3
Q ss_pred hcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
..++++|++||-.+||+ |.-+.++|..++ ..+|+++|++..|++ .++++|.+
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~----~~~~lGa~ 238 (374)
T 2jhf_A 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFA----KAKEVGAT 238 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHH----HHHHTTCS
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHH----HHHHhCCc
Confidence 45789999999998543 333445555543 238999999999975 45567875
No 331
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.47 E-value=0.19 Score=50.67 Aligned_cols=53 Identities=15% Similarity=0.132 Sum_probs=36.3
Q ss_pred hcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
..++++|++||-.+||+ |..+.++|..++ ..+|+++|++..|++. ++++|.+.
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~----~~~lGa~~ 238 (373)
T 2fzw_A 185 TAKLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFAR----AKEFGATE 238 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHH----HHHHTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHH----HHHcCCce
Confidence 45789999999997533 333444555443 2379999999999754 45678753
No 332
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.42 E-value=0.18 Score=50.33 Aligned_cols=58 Identities=12% Similarity=0.040 Sum_probs=40.0
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCCcE-EEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDEGE-VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~G~-ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
..+-+|||+|||.||.+..+... +-+-+ |+|+|+++..+...+.|.. ....+..|..+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~-----~~~~~~~DI~~ 72 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQ-----GKIMYVGDVRS 72 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTT-----TCEEEECCGGG
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCC-----CCceeCCChHH
Confidence 45668999999999999877653 22222 6899999998877766532 23455566543
No 333
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.34 E-value=0.11 Score=52.96 Aligned_cols=51 Identities=24% Similarity=0.249 Sum_probs=35.6
Q ss_pred hcC-CCCCCeEEEecCCCChHHH---HHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 256 ALD-PQKGERILDMCAAPGGKTT---AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 256 ~Ld-pqpGerVLDmCAaPGgKT~---~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
.++ +++|++||-.+| |+-.. ++|..++ ..+|+++|++..|++. ++++|.+.
T Consensus 189 ~~~~~~~g~~VlV~Ga--G~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~----~~~lGa~~ 243 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGA--GPLGLFGVVIARSLG-AENVIVIAGSPNRLKL----AEEIGADL 243 (380)
T ss_dssp TCSSCCBTCEEEEECC--SHHHHHHHHHHHHTT-BSEEEEEESCHHHHHH----HHHTTCSE
T ss_pred hcCCCCCCCEEEEECc--CHHHHHHHHHHHHcC-CceEEEEcCCHHHHHH----HHHcCCcE
Confidence 456 899999999984 55444 4444432 2389999999988754 45678753
No 334
>2apo_A Probable tRNA pseudouridine synthase B; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: b.122.1.1 d.265.1.2
Probab=94.24 E-value=0.054 Score=55.75 Aligned_cols=71 Identities=35% Similarity=0.558 Sum_probs=59.1
Q ss_pred CCCeEEEccchHHHHHcccccccCceeeccCCccCCCeEEEEEcccCCcCCCCCccccccccccccCCCCCCcccCCCce
Q 011036 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (495)
Q Consensus 122 ~~k~ViVd~~~~eAVLrGA~v~aPGIl~~~~~i~~Gd~VaV~~~l~~~~~~~~w~~~~~rg~~l~~~~~~~~~~~r~~l~ 201 (495)
..+.|.|+..++.++++|+.++.||+...+..+..|+.|.|+ ...+.+
T Consensus 268 ~lP~v~l~~~~~~~i~nG~~L~~pgi~~~~~~i~~gd~V~v~--------------------------------~~~G~f 315 (357)
T 2apo_A 268 HLKKVVVKDSAVDAICHGADVYVRGIAKLSKGIGKGETVLVE--------------------------------TLKGEA 315 (357)
T ss_dssp TSEEEEECHHHHHHHHTTCCEEGGGEEEEETTCCTTCEEEEE--------------------------------CTTSCE
T ss_pred cCcEEEECHHHHHHHhCcCccCCCcccccccccCCCCeEEEE--------------------------------cCCCEE
Confidence 568999999999999999999999987777778889988888 335679
Q ss_pred Eeecccccccccccccccceeee
Q 011036 202 IGQGTAMMSRAGIFRASEGIAVD 224 (495)
Q Consensus 202 Vg~GialmSr~elf~~p~GIaVe 224 (495)
||.|++.|+..+++...+|..++
T Consensus 316 lAIGea~~~~~ei~~~~kG~vvK 338 (357)
T 2apo_A 316 VAVGKALMNTKEILNADKGVAVD 338 (357)
T ss_dssp EEEEEESSCHHHHHHCSSSEEEE
T ss_pred EEEEEeccccccccccCCCeEEE
Confidence 99999998888888777775443
No 335
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.21 E-value=0.13 Score=52.25 Aligned_cols=54 Identities=13% Similarity=0.158 Sum_probs=37.6
Q ss_pred hhcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
+..++++|++||=.+||+ |--+.++|..++ ..+|+++|++..|++ +++++|.+.
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~----~a~~lGa~~ 241 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYE----TAKKFGVNE 241 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHH----HHHTTTCCE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHH----HHHHcCCcE
Confidence 345789999999997643 334445555443 347999999999975 566788753
No 336
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.20 E-value=0.064 Score=51.98 Aligned_cols=61 Identities=11% Similarity=0.195 Sum_probs=42.0
Q ss_pred ccHHHHHhhcC--CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC
Q 011036 248 LPSIVTAHALD--PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311 (495)
Q Consensus 248 l~S~v~~~~Ld--pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl 311 (495)
.|-.++.+++. -.+|+.|||.+||+|..+...+. ++ -.++++|+++..+..++++++.+++
T Consensus 197 ~p~~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~-~g--r~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 197 KPRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKK-LG--RNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CCHHHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHH-TT--CEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHH-cC--CeEEEEeCCHHHHHHHHHHHHhccC
Confidence 34444433332 36899999999999965444333 32 5899999999999999998886654
No 337
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.04 E-value=0.12 Score=52.24 Aligned_cols=52 Identities=19% Similarity=0.156 Sum_probs=37.6
Q ss_pred hcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
..++++|++||=.+||+ |--+.++|..++ .+|+++|++..|++. ++++|.+.
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~----~~~lGa~~ 236 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDR----AFALGADH 236 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHH----HHHHTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHH----HHHcCCCE
Confidence 45689999999998654 444555566553 389999999988754 56678764
No 338
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=93.96 E-value=0.08 Score=54.35 Aligned_cols=60 Identities=8% Similarity=0.029 Sum_probs=49.5
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~ 324 (495)
+++.||+++.|+|..|..|+...+ ..+|+|+|+++.-+..++++. ...+++.+..|+++.
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~---~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF---EGSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT---TTSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc---cCCCEEEEECCccch
Confidence 469999999999999999998533 257999999999887777765 246799999999764
No 339
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.76 E-value=0.21 Score=49.87 Aligned_cols=52 Identities=23% Similarity=0.192 Sum_probs=37.5
Q ss_pred hcCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
...+++|++||-.+||+ |-.+.++|.+++ .+|+++|++..|.+ .++++|.+.
T Consensus 171 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~----~~~~lGa~~ 223 (348)
T 3two_A 171 FSKVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQ----DALSMGVKH 223 (348)
T ss_dssp HTTCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHH----HHHHTTCSE
T ss_pred hcCCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHH----HHHhcCCCe
Confidence 34789999999987643 444555565553 38999999999975 456678764
No 340
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=93.54 E-value=0.44 Score=44.76 Aligned_cols=61 Identities=20% Similarity=0.090 Sum_probs=44.2
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCC--CcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRD--EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~--~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.|.+|| +.-|.||...+++..+.. ...|+.++++..+...+.+.++..+ ..+.++.+|...
T Consensus 3 ~~k~vl-ITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~ 65 (276)
T 1wma_A 3 GIHVAL-VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDD 65 (276)
T ss_dssp CCCEEE-ESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTC
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCC
Confidence 355666 566789999999886533 4589999999988887776666555 346777888643
No 341
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=93.52 E-value=0.24 Score=50.11 Aligned_cols=53 Identities=21% Similarity=0.149 Sum_probs=35.0
Q ss_pred hcCCC-----CCCeEEEecCC--CChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 256 ALDPQ-----KGERILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 256 ~Ldpq-----pGerVLDmCAa--PGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
..+++ +|++||=.+|+ -|--+.++|..++ ..+|+++|++..|++. ++++|.+.
T Consensus 161 ~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~----~~~lGad~ 220 (363)
T 4dvj_A 161 RLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEW----VKSLGAHH 220 (363)
T ss_dssp TSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHH----HHHTTCSE
T ss_pred hhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHH----HHHcCCCE
Confidence 34566 89999977532 2344455555443 3599999999988754 45678764
No 342
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.40 E-value=0.61 Score=44.68 Aligned_cols=62 Identities=16% Similarity=0.200 Sum_probs=48.0
Q ss_pred CCeEEEecCCCC-hHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPG-GKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPG-gKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.++|=-+|+.+ |...++|..+..+ ..|+.+|++..+++.+.+.+++.+-..+.++..|..+
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 69 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQS 69 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTC
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCC
Confidence 777887777654 6777777765333 4899999999999999998888876667788888654
No 343
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=93.40 E-value=0.27 Score=49.83 Aligned_cols=42 Identities=24% Similarity=0.199 Sum_probs=32.5
Q ss_pred eEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHHHHHHHHHH
Q 011036 264 RILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLA 306 (495)
Q Consensus 264 rVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~kv~~i~~~a 306 (495)
+|+|+|||.||.+..+... +-.. .|.|+|+++..+...+.|.
T Consensus 5 ~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~ 47 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNF 47 (333)
T ss_dssp EEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHC
T ss_pred EEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhC
Confidence 7999999999999887653 2122 4779999999987776664
No 344
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=92.83 E-value=0.76 Score=43.61 Aligned_cols=62 Identities=16% Similarity=0.140 Sum_probs=44.4
Q ss_pred CCeEEEecCCCC-hHHHHHHHhcCC-CcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPG-GKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPG-gKT~~iA~lm~~-~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||=-+|+.| |...++|..+.. ..+|+.++++......+.++.++.+-..+.++..|...
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 70 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTN 70 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCC
Confidence 667776666543 577778775533 34899999998877778787777765567888888643
No 345
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.81 E-value=0.3 Score=48.79 Aligned_cols=53 Identities=23% Similarity=0.199 Sum_probs=35.6
Q ss_pred hhcCCCCCCeEEEecCC--CChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 255 HALDPQKGERILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAa--PGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
+...+++|++||=.+|+ -|.-+.++|..++ .+|+++|++..+... ++++|.+.
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~----~~~~ga~~ 207 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMG--AKVIAVVNRTAATEF----VKSVGADI 207 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSGGGHHH----HHHHTCSE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHH----HHhcCCcE
Confidence 34568999999977652 2334444555443 389999999998754 45567654
No 346
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=92.54 E-value=0.21 Score=50.58 Aligned_cols=44 Identities=9% Similarity=0.029 Sum_probs=33.4
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCcE-E-EEEeCChHHHHHHHHHH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEGE-V-VAVDRSHNKVMDIQKLA 306 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G~-V-iA~D~s~~kv~~i~~~a 306 (495)
.-+|+|+|||.||.+..+... +-..+ | .|+|+++..+...+.|.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~ 55 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNF 55 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHH
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHC
Confidence 348999999999999887653 21124 5 69999999988777764
No 347
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.40 E-value=0.15 Score=51.23 Aligned_cols=57 Identities=11% Similarity=0.113 Sum_probs=37.9
Q ss_pred CCCCccEEEEcCCCCCCCCcccchhhhhcHHHHHHhHHHHHHHHHHHHhcCCCCCEEEEEeCC
Q 011036 422 SPNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCT 484 (495)
Q Consensus 422 ~~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~a~~Qrrll~~A~~lLkpGG~LVYSTCT 484 (495)
+.++||.|++|||.....-. .+. .. ....+.......|..+.++|||||.|+.....
T Consensus 30 ~~~svDlI~tDPPY~~~~~~--~y~-~~---~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 30 PEESISLVMTSPPFALQRKK--EYG-NL---EQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp CSSCEEEEEECCCCSSSCSC--SSC-SC---HHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCCCeeEEEECCCCCCCccc--ccC-Cc---CHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 35689999999998543110 111 11 22334455677889999999999999887653
No 348
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=92.29 E-value=0.12 Score=47.08 Aligned_cols=49 Identities=14% Similarity=0.096 Sum_probs=34.0
Q ss_pred cccHHHHHhhcCCCCCCeEEEecCCCC-hHHHHHHHhcCCCcEEEEEeCChHHHH
Q 011036 247 NLPSIVTAHALDPQKGERILDMCAAPG-GKTTAIASLLRDEGEVVAVDRSHNKVM 300 (495)
Q Consensus 247 ~l~S~v~~~~LdpqpGerVLDmCAaPG-gKT~~iA~lm~~~G~ViA~D~s~~kv~ 300 (495)
++...+...+ .++.+|||++||+| .-+.+||... .-.|+|+|+++..+.
T Consensus 24 ~LaeYI~~~~---~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 24 DLAVYIIRCS---GPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG 73 (153)
T ss_dssp HHHHHHHHHS---CSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT
T ss_pred HHHHHHHhcC---CCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc
Confidence 3444444444 34689999999999 4777777532 236999999987653
No 349
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.22 E-value=0.14 Score=49.43 Aligned_cols=56 Identities=13% Similarity=0.164 Sum_probs=37.0
Q ss_pred CCCccEEEEcCCCCCCCCcccchhhhhcHHHHHHhHHHHHHHHHHHHhcCCCCCEEEEEeCC
Q 011036 423 PNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCT 484 (495)
Q Consensus 423 ~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~a~~Qrrll~~A~~lLkpGG~LVYSTCT 484 (495)
.++||.|++|||... |.. -+. .. .+...+...-...|..+.++|++||.|+...|.
T Consensus 21 ~~~vdlI~~DPPY~~-~~~--~~d-~~--~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d 76 (260)
T 1g60_A 21 NKSVQLAVIDPPYNL-SKA--DWD-SF--DSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP 76 (260)
T ss_dssp TTCEEEEEECCCCSS-CSS--GGG-CC--SSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH
T ss_pred ccccCEEEECCCCCC-Ccc--ccc-cc--CCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc
Confidence 358999999999742 311 011 11 022334445667888899999999999887654
No 350
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.19 E-value=0.37 Score=48.12 Aligned_cols=46 Identities=22% Similarity=0.301 Sum_probs=30.8
Q ss_pred CCCeEEEecCCCChHH---HHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 261 KGERILDMCAAPGGKT---TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 261 pGerVLDmCAaPGgKT---~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
+|++||=.+ |.|+-. .++|.+++ .+|+++|++..|++. ++++|.+.
T Consensus 150 ~g~~VlV~g-g~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~----~~~lGa~~ 198 (346)
T 3fbg_A 150 EGKTLLIIN-GAGGVGSIATQIAKAYG--LRVITTASRNETIEW----TKKMGADI 198 (346)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTT--CEEEEECCSHHHHHH----HHHHTCSE
T ss_pred CCCEEEEEc-CCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHH----HHhcCCcE
Confidence 899999663 344444 44454443 389999999988754 44577654
No 351
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.04 E-value=0.6 Score=47.77 Aligned_cols=48 Identities=21% Similarity=0.266 Sum_probs=34.6
Q ss_pred CCCCCCeEEEecCCCChHHH---HHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 258 DPQKGERILDMCAAPGGKTT---AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 258 dpqpGerVLDmCAaPGgKT~---~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
.+++|++||=.+| |+-.. ++|.++ +..+|+++|.+..|++ +++++|.+
T Consensus 210 ~~~~g~~VlV~Ga--G~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~----~~~~lGa~ 260 (404)
T 3ip1_A 210 GIRPGDNVVILGG--GPIGLAAVAILKHA-GASKVILSEPSEVRRN----LAKELGAD 260 (404)
T ss_dssp CCCTTCEEEEECC--SHHHHHHHHHHHHT-TCSEEEEECSCHHHHH----HHHHHTCS
T ss_pred CCCCCCEEEEECC--CHHHHHHHHHHHHc-CCCEEEEECCCHHHHH----HHHHcCCC
Confidence 6899999999876 55544 444444 3348999999999875 45667865
No 352
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.87 E-value=0.38 Score=47.55 Aligned_cols=50 Identities=24% Similarity=0.265 Sum_probs=34.0
Q ss_pred hcCCCCCCeEEEecCCCChHHHH---HHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 256 ALDPQKGERILDMCAAPGGKTTA---IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaPGgKT~~---iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
..++++|++||=.+| .|+-... +|..++ .+|+++|++..|++.+ +++|.+
T Consensus 135 ~~~~~~g~~VlV~Ga-~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~----~~~Ga~ 187 (325)
T 3jyn_A 135 TYQVKPGEIILFHAA-AGGVGSLACQWAKALG--AKLIGTVSSPEKAAHA----KALGAW 187 (325)
T ss_dssp TSCCCTTCEEEESST-TSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHH----HHHTCS
T ss_pred hcCCCCCCEEEEEcC-CcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHH----HHcCCC
Confidence 357899999997663 3444444 444443 3899999999987644 456764
No 353
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=91.71 E-value=2.4 Score=41.18 Aligned_cols=61 Identities=21% Similarity=0.228 Sum_probs=43.9
Q ss_pred CCCeEEEecCCCC-hHHHHHHHhcCC-CcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCAAPG-GKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaPG-gKT~~iA~lm~~-~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.|.+||=-+|+.| |...++|..+.. ...|+.+|++......+.++.++.+ .+.++.+|..+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d 92 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVAD 92 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTC
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCC
Confidence 4778887777654 577778775533 3489999999877777777777765 46778888654
No 354
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.69 E-value=0.37 Score=48.10 Aligned_cols=50 Identities=18% Similarity=0.081 Sum_probs=33.8
Q ss_pred hcCCCCCCeEEEecCCCChHHHHHHHhcC--CCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 256 ALDPQKGERILDMCAAPGGKTTAIASLLR--DEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaPGgKT~~iA~lm~--~~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
..++ +|++||-.+| |+-...++++.+ +..+|+++|++..|+.. ++++|.+
T Consensus 163 ~~~~-~g~~VlV~Ga--G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~----~~~~Ga~ 214 (348)
T 2d8a_A 163 AGPI-SGKSVLITGA--GPLGLLGIAVAKASGAYPVIVSEPSDFRREL----AKKVGAD 214 (348)
T ss_dssp TSCC-TTCCEEEECC--SHHHHHHHHHHHHTTCCSEEEECSCHHHHHH----HHHHTCS
T ss_pred hcCC-CCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH----HHHhCCC
Confidence 3467 9999999987 555444444332 22379999999988754 4567764
No 355
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=91.15 E-value=0.47 Score=47.01 Aligned_cols=49 Identities=24% Similarity=0.406 Sum_probs=33.8
Q ss_pred cCCCCCCeEEEecCCCChHHH---HHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 257 LDPQKGERILDMCAAPGGKTT---AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~---~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
..+++|++||=.+| .|+-.. ++|..++ .+|+++|++..|+. .++++|.+
T Consensus 144 ~~~~~g~~vlV~Ga-~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~----~~~~~ga~ 195 (334)
T 3qwb_A 144 YHVKKGDYVLLFAA-AGGVGLILNQLLKMKG--AHTIAVASTDEKLK----IAKEYGAE 195 (334)
T ss_dssp SCCCTTCEEEESST-TBHHHHHHHHHHHHTT--CEEEEEESSHHHHH----HHHHTTCS
T ss_pred ccCCCCCEEEEECC-CCHHHHHHHHHHHHCC--CEEEEEeCCHHHHH----HHHHcCCc
Confidence 47899999998874 344444 4444432 48999999998875 44567765
No 356
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=90.96 E-value=1.1 Score=42.19 Aligned_cols=61 Identities=21% Similarity=0.143 Sum_probs=43.3
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeC-ChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~-s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.|.+|| +.-|.||...+++..+..+ .+|+++++ +..+...+.+..+..|. .+.++..|..+
T Consensus 20 ~~k~vl-ItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~ 82 (274)
T 1ja9_A 20 AGKVAL-TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISK 82 (274)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTS
T ss_pred CCCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCC
Confidence 356777 5566799999998866444 48999999 88887776666665553 36677787643
No 357
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=90.44 E-value=0.47 Score=47.20 Aligned_cols=52 Identities=17% Similarity=0.316 Sum_probs=38.1
Q ss_pred hhcCCCCCCeEEEecCC--CChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 255 HALDPQKGERILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAa--PGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
+..++++|++||-.+|| -|.-+.++|..++ .+|+++|++..++..+ +++|.+
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~----~~lga~ 191 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNKHTEEL----LRLGAA 191 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHH----HHHTCS
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHH----HhCCCc
Confidence 45688999999998876 3555566666553 4899999999987654 456765
No 358
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=90.35 E-value=0.21 Score=50.19 Aligned_cols=51 Identities=16% Similarity=0.260 Sum_probs=33.1
Q ss_pred CCCccEEEEcCCCCCCCCcccchhhhhcHHHHHHhHHHHHHHHHHHHhcCCCCCEEEEEe
Q 011036 423 PNSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYST 482 (495)
Q Consensus 423 ~~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~a~~Qrrll~~A~~lLkpGG~LVYST 482 (495)
.++||.|++|||.... ...|. +...+...-...|..+.++|+|||.|+...
T Consensus 56 ~~svDlI~tDPPY~~~---~d~~~------~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 56 DDSVQLIICDPPYNIM---LADWD------DHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp TTCEEEEEECCCSBCC---GGGGG------TCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCcCEEEECCCCCCC---CCCcc------CHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 4589999999997432 01111 011223344567788899999999987764
No 359
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.18 E-value=3.3 Score=39.39 Aligned_cols=60 Identities=15% Similarity=0.200 Sum_probs=42.3
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCC------------hHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRS------------HNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s------------~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+.+|++ ..++..+...++..|. .+.++..|..+
T Consensus 10 gk~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 82 (287)
T 3pxx_A 10 DKVVL-VTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVDVRD 82 (287)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECCTTC
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEccCCC
Confidence 55666 4555688899998866444 489999998 7777777666666653 46778888644
No 360
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=89.99 E-value=3.8 Score=39.00 Aligned_cols=60 Identities=18% Similarity=0.225 Sum_probs=43.8
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...+++..+... .+|+++|++..++..+.+.++..|. .+.++..|...
T Consensus 31 ~k~vl-ITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~ 91 (272)
T 1yb1_A 31 GEIVL-ITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSN 91 (272)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCC
Confidence 55666 4556789999998865333 4899999999988877776666553 47778888644
No 361
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=89.87 E-value=2.9 Score=38.92 Aligned_cols=60 Identities=22% Similarity=0.257 Sum_probs=44.8
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
.|.+|| +.-|.||...++|..+..+ ..|+.+|++..++..+.+.++..+...+.++..|.
T Consensus 13 ~~k~vl-ITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~ 73 (247)
T 3i1j_A 13 KGRVIL-VTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNL 73 (247)
T ss_dssp TTCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCT
T ss_pred CCCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEecc
Confidence 356666 4556788999998866433 48999999999999888888877755566666654
No 362
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=89.80 E-value=2.7 Score=40.83 Aligned_cols=61 Identities=20% Similarity=0.140 Sum_probs=44.3
Q ss_pred CCCeEEEecCCC-ChHHHHHHHhcC-CCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCAAP-GGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaP-GgKT~~iA~lm~-~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.|.+||=-+++. .|...++|..+. ....|+.+|++......+.+.++..+- +.++..|..+
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~Dv~d 91 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGV--KLTVPCDVSD 91 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTC--CEEEECCTTC
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCC--eEEEEcCCCC
Confidence 366788777654 588888887653 334899999998887778887777663 5677888644
No 363
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=89.77 E-value=0.68 Score=46.39 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=35.9
Q ss_pred hcCCCCC------CeEEEecCCCChHHHHH-HHhc-CCCc--EEEEEeCChH---HHHHHHHHHHHhCCC
Q 011036 256 ALDPQKG------ERILDMCAAPGGKTTAI-ASLL-RDEG--EVVAVDRSHN---KVMDIQKLAAEMGLK 312 (495)
Q Consensus 256 ~LdpqpG------erVLDmCAaPGgKT~~i-A~lm-~~~G--~ViA~D~s~~---kv~~i~~~a~~~gl~ 312 (495)
.+.+++| ++||=.+| |+-.... +++. +-.| +|+++|++.. |.+ +++++|.+
T Consensus 161 ~~~~~~g~~~~~~~~VlV~Ga--G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~----~~~~lGa~ 224 (357)
T 2b5w_A 161 HAYASRSAFDWDPSSAFVLGN--GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTID----IIEELDAT 224 (357)
T ss_dssp HHHHTTTTSCCCCCEEEEECC--SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHH----HHHHTTCE
T ss_pred hcCCCCCcccCCCCEEEEECC--CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHH----HHHHcCCc
Confidence 3457899 99999997 6666555 5544 4333 4999999988 864 45567864
No 364
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=89.27 E-value=0.83 Score=45.54 Aligned_cols=50 Identities=18% Similarity=0.186 Sum_probs=32.9
Q ss_pred hcCCCCCCeEEEecCC--CChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 256 ALDPQKGERILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 256 ~LdpqpGerVLDmCAa--PGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
..++++|++||=.+|+ -|--+.++|..++ .+|+++ .+..|++ .++++|.+
T Consensus 145 ~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~G--a~Vi~~-~~~~~~~----~~~~lGa~ 196 (343)
T 3gaz_A 145 RAQVQDGQTVLIQGGGGGVGHVAIQIALARG--ARVFAT-ARGSDLE----YVRDLGAT 196 (343)
T ss_dssp TTCCCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEE-ECHHHHH----HHHHHTSE
T ss_pred hcCCCCCCEEEEecCCCHHHHHHHHHHHHCC--CEEEEE-eCHHHHH----HHHHcCCC
Confidence 4578999999987743 2333444454443 389999 8888754 45667765
No 365
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=89.13 E-value=1.3 Score=44.66 Aligned_cols=44 Identities=18% Similarity=0.160 Sum_probs=31.1
Q ss_pred CCccEEEEcCCCCCCCCcccchhhhhcHHHHHHhHHHHHHHHHHHHhcCCCCCEEEEEeCC
Q 011036 424 NSFDRVLLDAPCSALGLRPRLFAAEETIQSLRNHGKYQRRMFDQAVQLVRPGGIIVYSTCT 484 (495)
Q Consensus 424 ~sFDrVLlDaPCSglG~rp~l~~~~~t~~~l~~~a~~Qrrll~~A~~lLkpGG~LVYSTCT 484 (495)
..||.|.+|+ -+=-..|.+|. ..+|.+..++++|||+|+--||+
T Consensus 185 ~~~Da~flDg--FsP~kNPeLWs---------------~e~f~~l~~~~~pgg~laTYtaa 228 (308)
T 3vyw_A 185 FKADAVFHDA--FSPYKNPELWT---------------LDFLSLIKERIDEKGYWVSYSSS 228 (308)
T ss_dssp CCEEEEEECC--SCTTTSGGGGS---------------HHHHHHHHTTEEEEEEEEESCCC
T ss_pred cceeEEEeCC--CCcccCcccCC---------------HHHHHHHHHHhCCCcEEEEEeCc
Confidence 3699999996 11134566654 24688888999999999855553
No 366
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.08 E-value=2.8 Score=39.62 Aligned_cols=61 Identities=21% Similarity=0.300 Sum_probs=44.4
Q ss_pred CCeEEEecCCCC-hHHHHHHHhcC-CCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPG-GKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPG-gKT~~iA~lm~-~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||=-++ .| |...++|..+. ....|+.+|++..++..+.+..++.+-..+.++..|..+
T Consensus 22 ~k~vlITGa-sg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~ 84 (266)
T 3o38_A 22 GKVVLVTAA-AGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS 84 (266)
T ss_dssp TCEEEESSC-SSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC
T ss_pred CCEEEEECC-CCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC
Confidence 566775554 34 67777877553 334899999999998888777766665678889988754
No 367
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=88.95 E-value=4.5 Score=38.26 Aligned_cols=61 Identities=21% Similarity=0.176 Sum_probs=45.1
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.|.+||= .-|.||...++|..+..+ .+|+++|++..++..+.+..+..|- .+.++.+|...
T Consensus 28 ~~k~vlI-TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 89 (262)
T 3rkr_A 28 SGQVAVV-TGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSH 89 (262)
T ss_dssp TTCEEEE-SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTC
T ss_pred CCCEEEE-ECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCC
Confidence 3666764 456788999998866433 4899999999999888777776653 47778888644
No 368
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=88.79 E-value=1.8 Score=44.76 Aligned_cols=30 Identities=7% Similarity=-0.014 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHHHhcCCCCCEEEEEeCCCC
Q 011036 457 HGKYQRRMFDQAVQLVRPGGIIVYSTCTIN 486 (495)
Q Consensus 457 ~a~~Qrrll~~A~~lLkpGG~LVYSTCTi~ 486 (495)
+.+--..+|..-.+-|+|||++|.++..-.
T Consensus 200 f~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~ 229 (384)
T 2efj_A 200 FTKDFTTFLRIHSEELISRGRMLLTFICKE 229 (384)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHhccCCeEEEEEecCC
Confidence 334445678888899999999999987553
No 369
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=88.77 E-value=0.85 Score=45.08 Aligned_cols=54 Identities=20% Similarity=0.310 Sum_probs=35.1
Q ss_pred hhcCCCCCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 255 ~~LdpqpGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
+...+++|++||-.+| .|+....++++.+.. .+|+++|++..++..+ ++++|.+
T Consensus 143 ~~~~~~~g~~vlI~Ga-~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~---~~~~g~~ 197 (336)
T 4b7c_A 143 DVGQPKNGETVVISGA-AGAVGSVAGQIARLKGCRVVGIAGGAEKCRFL---VEELGFD 197 (336)
T ss_dssp HTTCCCTTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---HHTTCCS
T ss_pred HhcCCCCCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHcCCC
Confidence 3457899999997766 344444444433222 3899999999887543 2556764
No 370
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=88.69 E-value=0.69 Score=48.15 Aligned_cols=51 Identities=22% Similarity=0.176 Sum_probs=35.1
Q ss_pred cCCCCCCeEEEecC-C-CChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 257 LDPQKGERILDMCA-A-PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 257 LdpqpGerVLDmCA-a-PGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
.++++|++||=.+| | -|.-+.++|..++ .+|++++.+..|++. ++++|.+.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~G--a~vi~~~~~~~~~~~----~~~lGa~~ 276 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGG--ANPICVVSSPQKAEI----CRAMGAEA 276 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHH----HHHHTCCE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CeEEEEECCHHHHHH----HHhhCCcE
Confidence 57899999997765 2 2334455555543 489999999988754 45678753
No 371
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=88.65 E-value=2.2 Score=40.14 Aligned_cols=62 Identities=21% Similarity=0.164 Sum_probs=45.0
Q ss_pred CCCCeEEEecCC-CChHHHHHHHhcCC-CcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 260 QKGERILDMCAA-PGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 260 qpGerVLDmCAa-PGgKT~~iA~lm~~-~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
..+.+||=-+++ .||...++|..+.. ..+|+.+|++......+++++++.+ .+.++.+|...
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~ 75 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVAD 75 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCC
Confidence 457788877764 48888888876633 3489999999777777777777765 36677888644
No 372
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=88.13 E-value=1.6 Score=45.05 Aligned_cols=52 Identities=23% Similarity=0.278 Sum_probs=35.3
Q ss_pred cCCCCCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 257 LDPQKGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 257 LdpqpGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
.++++|++||=.+| .|+-...++++.+.. .+|++++++..|+.. ++++|.+.
T Consensus 216 ~~~~~g~~VlV~Ga-sG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~----~~~lGa~~ 268 (447)
T 4a0s_A 216 AQMKQGDIVLIWGA-SGGLGSYAIQFVKNGGGIPVAVVSSAQKEAA----VRALGCDL 268 (447)
T ss_dssp TCCCTTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHTTCCC
T ss_pred cCCCCCCEEEEECC-CCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHhcCCCE
Confidence 57899999997665 455554444433222 489999999998764 45678764
No 373
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=88.03 E-value=1.3 Score=43.63 Aligned_cols=41 Identities=7% Similarity=0.075 Sum_probs=32.0
Q ss_pred CeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHH
Q 011036 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKL 305 (495)
Q Consensus 263 erVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~ 305 (495)
.+|||++||.||.+..+-.. +=--|.|+|+++..+...+.|
T Consensus 1 mkvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N 41 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESN 41 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHH
T ss_pred CeEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHH
Confidence 47999999999999876542 222567999999998877666
No 374
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=87.76 E-value=2.3 Score=40.33 Aligned_cols=58 Identities=17% Similarity=0.291 Sum_probs=40.0
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.|.+||= .-|.||...++|..+..+ .+|+.+|++..++..+.+. ++ ..+.++..|..+
T Consensus 7 ~gk~~lV-TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~Dv~~ 65 (255)
T 4eso_A 7 QGKKAIV-IGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREE---FG-PRVHALRSDIAD 65 (255)
T ss_dssp TTCEEEE-ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---HG-GGEEEEECCTTC
T ss_pred CCCEEEE-ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hC-CcceEEEccCCC
Confidence 3666664 445688888988866433 4899999999887655443 33 346778888644
No 375
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=87.68 E-value=3.4 Score=40.24 Aligned_cols=61 Identities=13% Similarity=0.073 Sum_probs=44.7
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.|.+||=- -|.||...++|..+... ..|+.+|++..++..+.+.++..|. .+.++..|..+
T Consensus 30 ~gk~vlVT-Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 91 (301)
T 3tjr_A 30 DGRAAVVT-GGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRH 91 (301)
T ss_dssp TTCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCCEEEEe-CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCC
Confidence 46677754 45588888888866433 4899999999999888777766654 46777888654
No 376
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=87.60 E-value=0.66 Score=47.63 Aligned_cols=25 Identities=24% Similarity=0.272 Sum_probs=20.3
Q ss_pred HHHHHHHHHhcCCCCCEEEEEeCCC
Q 011036 461 QRRMFDQAVQLVRPGGIIVYSTCTI 485 (495)
Q Consensus 461 Qrrll~~A~~lLkpGG~LVYSTCTi 485 (495)
-..+|..-.+-|+|||++|.++..-
T Consensus 188 ~~~FL~~Ra~EL~pGG~mvl~~~gr 212 (359)
T 1m6e_X 188 HALFLRCRAQEVVPGGRMVLTILGR 212 (359)
T ss_dssp HHHHHHHHHHHBCTTCEEEEEEEEC
T ss_pred HHHHHHHHHHHhcCCceEEEEEecC
Confidence 3466888889999999999998644
No 377
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=87.54 E-value=7.5 Score=36.05 Aligned_cols=60 Identities=18% Similarity=0.184 Sum_probs=44.7
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+... .+|++++++..+...+.+..+..+. .+.++..|...
T Consensus 5 ~k~vl-ITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 65 (247)
T 3lyl_A 5 EKVAL-VTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISD 65 (247)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCC
Confidence 45565 4556788888988866444 4899999999999888888777664 46778888644
No 378
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=87.35 E-value=6.3 Score=36.46 Aligned_cols=60 Identities=17% Similarity=0.181 Sum_probs=43.0
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...+++..+..+ .+|+++|++..+...+.+.++..+- .+.++..|...
T Consensus 11 ~~~vl-VtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 71 (255)
T 1fmc_A 11 GKCAI-ITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITS 71 (255)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCC
Confidence 56666 4556799999998865444 4899999999888777666665553 46677777643
No 379
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=87.11 E-value=2 Score=42.86 Aligned_cols=55 Identities=16% Similarity=0.231 Sum_probs=37.0
Q ss_pred cCCCCC-CeEEEecCC--CChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 257 LDPQKG-ERILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 257 LdpqpG-erVLDmCAa--PGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
.++++| ++||=.+|+ -|..+.++|..++ .+|+++..+.+++...++.++++|.+.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~~~~~~~~~~~lGa~~ 219 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLN--FNSISVIRDRPNLDEVVASLKELGATQ 219 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHT--CEEEEEECCCTTHHHHHHHHHHHTCSE
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCC--CEEEEEecCccccHHHHHHHHhcCCeE
Confidence 478899 999977652 2334455555553 478898887776555556677889764
No 380
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.86 E-value=4.9 Score=38.08 Aligned_cols=61 Identities=13% Similarity=0.173 Sum_probs=44.3
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.|.+||= .-|.||...++|..+..+ .+|+.+|++..++..+.+..+..|. .+.++..|..+
T Consensus 10 ~~k~vlV-TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 71 (264)
T 3ucx_A 10 TDKVVVI-SGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITD 71 (264)
T ss_dssp TTCEEEE-ESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCcEEEE-ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 3566664 455677888888766433 4899999999999888877776653 46778888654
No 381
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=86.76 E-value=2.4 Score=42.54 Aligned_cols=51 Identities=16% Similarity=0.173 Sum_probs=35.3
Q ss_pred hcCCCCCCeEEEecC-C-CChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 256 ALDPQKGERILDMCA-A-PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 256 ~LdpqpGerVLDmCA-a-PGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
..++++|++||-.+| | -|.-+.++|..++ .+|+++|++..|+.. ++++|.+
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~----~~~~Ga~ 210 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKAK--CHVIGTCSSDEKSAF----LKSLGCD 210 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHHHTT--CEEEEEESSHHHHHH----HHHTTCS
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHhCC--CEEEEEECCHHHHHH----HHHcCCc
Confidence 457899999999874 2 3344455555543 389999999988754 4457765
No 382
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=86.27 E-value=5.4 Score=39.22 Aligned_cols=61 Identities=13% Similarity=0.152 Sum_probs=45.4
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~ 323 (495)
|.+||=- -|.||.+.++|..+..+ ..|++++++..++..+.+..+..+.. .+.++.+|...
T Consensus 8 ~k~vlVT-Gas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~ 70 (319)
T 3ioy_A 8 GRTAFVT-GGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS 70 (319)
T ss_dssp TCEEEEE-TTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC
T ss_pred CCEEEEc-CCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC
Confidence 5567644 45688899998866433 48999999999998888777766642 57888888654
No 383
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=86.24 E-value=7.2 Score=36.95 Aligned_cols=61 Identities=13% Similarity=0.114 Sum_probs=43.7
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHH-hCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAE-MGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~-~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+.+|++..++..+.+..+. .+-..+.++..|..+
T Consensus 8 ~k~~l-VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~ 70 (265)
T 3lf2_A 8 EAVAV-VTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD 70 (265)
T ss_dssp TCEEE-EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC
Confidence 45555 4556688888888866433 4899999999998887776665 444457888888654
No 384
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=86.17 E-value=2.3 Score=41.50 Aligned_cols=61 Identities=20% Similarity=0.334 Sum_probs=44.9
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+| .|+.+|++..++..+.+..+..+-..+.++..|..+
T Consensus 41 ~k~vl-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d 102 (293)
T 3rih_A 41 ARSVL-VTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD 102 (293)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCC
Confidence 55565 55667889999988664344 899999999998877766665554567888888754
No 385
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=86.17 E-value=5.4 Score=37.86 Aligned_cols=61 Identities=15% Similarity=0.068 Sum_probs=38.6
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHHHHHHHHHHHHhCC--CceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGL--KCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~kv~~i~~~a~~~gl--~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+| .|+.++++......+.+.++++.- ..+.++..|..+
T Consensus 11 ~k~vlV-TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d 74 (262)
T 3ksu_A 11 NKVIVI-AGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSN 74 (262)
T ss_dssp TCEEEE-ETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCS
T ss_pred CCEEEE-ECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCC
Confidence 566664 5556889999988775555 888888765544444444444321 246777887643
No 386
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=86.03 E-value=2.2 Score=41.82 Aligned_cols=32 Identities=22% Similarity=0.288 Sum_probs=26.1
Q ss_pred CCCeEEEecCCCChHHHHHHHhc------CCCcEEEEEe
Q 011036 261 KGERILDMCAAPGGKTTAIASLL------RDEGEVVAVD 293 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm------~~~G~ViA~D 293 (495)
|| .|++.+..-|+-+..+|.+. +...+|+++|
T Consensus 70 pG-~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fD 107 (257)
T 3tos_A 70 PG-VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFD 107 (257)
T ss_dssp CS-EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEE
T ss_pred CC-eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEE
Confidence 55 79999999999998887652 2357999999
No 387
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=85.78 E-value=5.6 Score=37.11 Aligned_cols=60 Identities=15% Similarity=0.193 Sum_probs=41.5
Q ss_pred CCeEEEecCCCChHHHHHHHhcC-CCcEEEEEeC-ChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~-~~G~ViA~D~-s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...+++..+. ...+|+++++ +..+...+.+..+..+- .+.++..|..+
T Consensus 7 ~k~vl-ITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~ 68 (261)
T 1gee_A 7 GKVVV-ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTV 68 (261)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTS
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECCCCC
Confidence 55666 45567899999987653 3348999999 88777766666555442 46777787643
No 388
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=85.37 E-value=2.4 Score=41.66 Aligned_cols=52 Identities=13% Similarity=0.216 Sum_probs=33.2
Q ss_pred hhcCCCCCCeEEEec-CC-CChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 255 HALDPQKGERILDMC-AA-PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 255 ~~LdpqpGerVLDmC-Aa-PGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
+...+++|++||=.+ +| -|--+.++|..++ .+|++++. ..+ ++.++++|.+.
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G--a~vi~~~~-~~~----~~~~~~lGa~~ 199 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKG--TTVITTAS-KRN----HAFLKALGAEQ 199 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEEC-HHH----HHHHHHHTCSE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC--CEEEEEec-cch----HHHHHHcCCCE
Confidence 456789999999764 22 2334455555553 38999984 444 35667788763
No 389
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=85.32 E-value=2.4 Score=45.11 Aligned_cols=59 Identities=15% Similarity=0.134 Sum_probs=40.3
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~ 324 (495)
.-+++|+|||.||.+..+-.. +--.|+|+|.++..+...+.|... ......+..|..+.
T Consensus 88 ~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~--~p~~~~~~~DI~~i 146 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYC--DPATHHFNEDIRDI 146 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCC--CTTTCEEESCTHHH
T ss_pred cceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhccc--CCCcceeccchhhh
Confidence 458999999999999877642 222488999999888777665311 11234556776553
No 390
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.20 E-value=5.5 Score=38.01 Aligned_cols=61 Identities=23% Similarity=0.267 Sum_probs=42.5
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeC-------------ChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDR-------------SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~-------------s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.|.+||= .-|.||...++|..+..+ .+|+++|+ +..++..+.+..+..|. .+.++..|...
T Consensus 14 ~gk~~lV-TGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 88 (280)
T 3pgx_A 14 QGRVAFI-TGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLDVRD 88 (280)
T ss_dssp TTCEEEE-ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred CCCEEEE-ECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcCCCC
Confidence 3666664 455688888888866434 48999998 67777777776666553 46677777644
No 391
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=85.05 E-value=5.9 Score=36.85 Aligned_cols=60 Identities=10% Similarity=0.087 Sum_probs=43.1
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...+++..+..+ .+|+++|++..+...+.+.++..+. .+.++..|..+
T Consensus 13 ~k~vl-ItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~ 73 (260)
T 3awd_A 13 NRVAI-VTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTN 73 (260)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCC
Confidence 55666 4556799999998866333 4899999999888777666655543 47778888644
No 392
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=84.98 E-value=7 Score=37.03 Aligned_cols=61 Identities=16% Similarity=0.250 Sum_probs=45.3
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+| +|+.+|++..++..+.+..+..+-..+.++..|..+
T Consensus 10 ~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~ 71 (262)
T 3pk0_A 10 GRSVV-VTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD 71 (262)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTS
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCC
Confidence 55666 45567888999988664444 899999999998887777766664567888888754
No 393
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=84.94 E-value=9 Score=35.19 Aligned_cols=59 Identities=25% Similarity=0.266 Sum_probs=41.3
Q ss_pred CeEEEecCCCChHHHHHHHhcCCCc-EEEE-EeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 263 ERILDMCAAPGGKTTAIASLLRDEG-EVVA-VDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 263 erVLDmCAaPGgKT~~iA~lm~~~G-~ViA-~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.+|| +.-|.||...+++..+..+| +|++ .+++..+...+.+..+..+- .+.++..|..+
T Consensus 2 k~vl-VTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 62 (244)
T 1edo_A 2 PVVV-VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSK 62 (244)
T ss_dssp CEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTS
T ss_pred CEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEeCCCCC
Confidence 3455 55678999999988664344 7888 58999888877766665553 46777787643
No 394
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=84.93 E-value=0.71 Score=46.16 Aligned_cols=50 Identities=8% Similarity=0.071 Sum_probs=37.5
Q ss_pred CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCC
Q 011036 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311 (495)
Q Consensus 259 pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl 311 (495)
-.+|+.|||-+||+|. |.+.|..++ -..+++|+++.-+..++++.++.+.
T Consensus 250 ~~~~~~VlDpF~GsGt-t~~aa~~~g--r~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNT-TGLVAERES--RKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp CCTTCEEEETTCTTCH-HHHHHHHTT--CEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred CCCCCEEEECCCCCCH-HHHHHHHcC--CCEEEEeCCHHHHHHHHHHHHhccc
Confidence 3689999999999995 333344443 5799999999988887777665554
No 395
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=84.57 E-value=10 Score=35.56 Aligned_cols=60 Identities=17% Similarity=0.147 Sum_probs=42.5
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ .+|+++|++..++..+.+..+..|. .+.++..|..+
T Consensus 9 ~k~vl-VTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 69 (260)
T 2ae2_A 9 GCTAL-VTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSS 69 (260)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 56677 5556788999998765433 4899999999888776665555443 46777787643
No 396
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=84.53 E-value=6.5 Score=37.60 Aligned_cols=60 Identities=13% Similarity=0.187 Sum_probs=41.9
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHh-CCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEM-GLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~-gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+ .+|+++|++..++..+.+..+.. + ..+.++.+|..+
T Consensus 26 ~k~vlI-TGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~ 87 (302)
T 1w6u_A 26 GKVAFI-TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQCDVRD 87 (302)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTC
T ss_pred CCEEEE-ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEeCCCC
Confidence 556664 556789999998866433 48999999998887665555443 4 347788888644
No 397
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=84.38 E-value=4.7 Score=38.76 Aligned_cols=60 Identities=18% Similarity=0.205 Sum_probs=44.2
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+ ..|+.+|++..++..+.+..+..|- .+.++..|...
T Consensus 32 gk~~lV-TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d 92 (276)
T 3r1i_A 32 GKRALI-TGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQ 92 (276)
T ss_dssp TCEEEE-ESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTC
T ss_pred CCEEEE-eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCC
Confidence 566664 555688999998866433 4899999999998888777776654 46677888644
No 398
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=84.34 E-value=0.89 Score=45.61 Aligned_cols=60 Identities=17% Similarity=0.237 Sum_probs=38.3
Q ss_pred ccHHHHHhhcC--CCCCCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCCh---HHHHHHHHHHHHhC
Q 011036 248 LPSIVTAHALD--PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH---NKVMDIQKLAAEMG 310 (495)
Q Consensus 248 l~S~v~~~~Ld--pqpGerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~---~kv~~i~~~a~~~g 310 (495)
.|-.++..++. -.+|+.|||-+||+|.-.. .|..++ -..+++|+++ .-+..++++.++.|
T Consensus 227 kp~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~-aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 227 KPAAVIERLVRALSHPGSTVLDFFAGSGVTAR-VAIQEG--RNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CCHHHHHHHHHHHSCTTCEEEETTCTTCHHHH-HHHHHT--CEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCHHHHHHHHHHhCCCCCEEEecCCCCCHHHH-HHHHcC--CcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 34444444332 3689999999999995333 333333 4789999999 88877777766554
No 399
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=84.33 E-value=4.5 Score=39.01 Aligned_cols=61 Identities=18% Similarity=0.085 Sum_probs=44.5
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ .+|+.+|++..++..+.+.....+-..+.++..|..+
T Consensus 33 gk~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d 94 (281)
T 4dry_A 33 GRIAL-VTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD 94 (281)
T ss_dssp -CEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC
Confidence 56666 4556788999998866433 4899999999998887776666555556888888754
No 400
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=84.22 E-value=5.3 Score=38.02 Aligned_cols=57 Identities=26% Similarity=0.326 Sum_probs=38.6
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ .+|+++|++..++..+ +++++ ..+.++..|..+
T Consensus 6 ~k~vl-ITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~-~~~~~~~~D~~~ 63 (263)
T 2a4k_A 6 GKTIL-VTGAASGIGRAALDLFAREGASLVAVDREERLLAEA---VAALE-AEAIAVVADVSD 63 (263)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHTCC-SSEEEEECCTTS
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHhc-CceEEEEcCCCC
Confidence 45566 4556788999998866434 4899999998776544 34443 346777888643
No 401
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=84.12 E-value=11 Score=36.08 Aligned_cols=61 Identities=18% Similarity=0.150 Sum_probs=39.5
Q ss_pred CCCeEEEecCCC-ChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCAAP-GGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaP-GgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.|.+||=-+|+. ||...++|..+..+ .+|+++|++...-..+.++.++.+ .+.++..|..+
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~Dl~~ 82 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG--SDLVVKCDVSL 82 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEcCCCC
Confidence 367888777753 88999998866333 489999999853233444444444 25667777643
No 402
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=84.11 E-value=3.3 Score=38.70 Aligned_cols=60 Identities=20% Similarity=0.215 Sum_probs=37.6
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCC------CceEEEEcchh
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGL------KCITTYKLDAL 322 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl------~~i~~~~~Da~ 322 (495)
|.+|| +.-|.||...+++..+..+ .+|+++|++..+...+.+.++..|. ..+.++..|..
T Consensus 7 ~k~vl-ITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 73 (264)
T 2pd6_A 7 SALAL-VTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVS 73 (264)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTT
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCC
Confidence 55666 5566788999998765333 4899999999887665544333331 23566667654
No 403
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=83.91 E-value=6.1 Score=37.60 Aligned_cols=60 Identities=18% Similarity=0.165 Sum_probs=39.2
Q ss_pred CCeEEEecCC-CChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAA-PGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAa-PGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||=-+|+ .||...++|..+..+ .+|+.+|++...-..+.++.++.+ .+.++..|..+
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~ 67 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN--SPYVYELDVSK 67 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTC
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEcCCCC
Confidence 6678777765 489999998866444 489999999752223344444444 25667777643
No 404
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=83.67 E-value=8.5 Score=35.40 Aligned_cols=60 Identities=20% Similarity=0.266 Sum_probs=41.7
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHH-hCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAE-MGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~-~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...+++..+..+ .+|++++++..++..+.+..+. .+. .+.++..|...
T Consensus 7 ~~~vl-VtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 68 (248)
T 2pnf_A 7 GKVSL-VTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV-KAHGVEMNLLS 68 (248)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCC-CEEEEECCTTC
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCC-ceEEEEccCCC
Confidence 55666 4556799999998865333 4899999999888776655543 343 46777777643
No 405
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=83.58 E-value=7.5 Score=36.66 Aligned_cols=60 Identities=22% Similarity=0.121 Sum_probs=44.8
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+.+|++..++..+.+.++..|- .+.++.+|...
T Consensus 7 ~k~vl-VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 67 (252)
T 3h7a_A 7 NATVA-VIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARN 67 (252)
T ss_dssp SCEEE-EECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTC
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCC
Confidence 55565 4556688888888866434 4899999999999888887777653 57788888654
No 406
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=83.50 E-value=12 Score=35.37 Aligned_cols=60 Identities=22% Similarity=0.168 Sum_probs=40.7
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeC-ChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~-s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+| .|+.+|+ +..+...+.+.++..|. .+.++.+|...
T Consensus 18 ~k~~lV-TGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 79 (270)
T 3is3_A 18 GKVALV-TGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQ 79 (270)
T ss_dssp TCEEEE-SCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTS
T ss_pred CCEEEE-ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 556664 5566888888888664444 7888775 56667777777766663 46778888654
No 407
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=83.47 E-value=5.5 Score=37.35 Aligned_cols=60 Identities=25% Similarity=0.277 Sum_probs=42.4
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+| .|+++|++..++..+.+.++..|. .+.++..|..+
T Consensus 7 ~k~~lV-TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~ 67 (247)
T 2jah_A 7 GKVALI-TGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLELDVAD 67 (247)
T ss_dssp TCEEEE-ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEEE-ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 555664 4456889999988664444 899999999888777666655553 46777888644
No 408
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=83.41 E-value=8.2 Score=37.00 Aligned_cols=61 Identities=13% Similarity=0.107 Sum_probs=41.9
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHh----CCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEM----GLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~----gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+ .+|+++|++..++..+.+..+.. .-..+.++..|...
T Consensus 18 ~k~vlV-TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T 1yxm_A 18 GQVAIV-TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN 83 (303)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC
T ss_pred CCEEEE-ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCC
Confidence 566774 456799999998866333 48999999998887766555441 11347778888643
No 409
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=83.37 E-value=7.2 Score=35.96 Aligned_cols=59 Identities=20% Similarity=0.157 Sum_probs=40.8
Q ss_pred CeEEEecCCCChHHHHHHHhcCCCc--------EEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 263 ERILDMCAAPGGKTTAIASLLRDEG--------EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 263 erVLDmCAaPGgKT~~iA~lm~~~G--------~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.+|| +.-|.||...+++..+..+| .|++++++..++..+.+..+..+ ..+.++..|...
T Consensus 3 k~vl-ITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~ 69 (244)
T 2bd0_A 3 HILL-ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDTITADISD 69 (244)
T ss_dssp EEEE-EETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-CEEEEEECCTTS
T ss_pred CEEE-EECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC-CeeeEEEecCCC
Confidence 3455 55578999999987664444 79999999988877665554433 246778888643
No 410
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=83.36 E-value=13 Score=35.39 Aligned_cols=60 Identities=20% Similarity=0.253 Sum_probs=42.3
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||.+.+++..+..+| +|++++++..++..+.+.++..+. .+.++..|..+
T Consensus 44 ~k~vl-ITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d 104 (285)
T 2c07_A 44 NKVAL-VTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSK 104 (285)
T ss_dssp SCEEE-EESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCC
Confidence 55666 45567999999988765444 899999999888776665554443 36777777643
No 411
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=83.33 E-value=12 Score=34.78 Aligned_cols=58 Identities=21% Similarity=0.250 Sum_probs=39.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
.++.+|| +.-|.||...++|..+..+ .+|+.+|++..++..+.+. ++ ..+.++..|..
T Consensus 12 ~~~k~vl-VTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~D~~ 70 (249)
T 3f9i_A 12 LTGKTSL-ITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNA---LK-DNYTIEVCNLA 70 (249)
T ss_dssp CTTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---HC-SSEEEEECCTT
T ss_pred CCCCEEE-EECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH---hc-cCccEEEcCCC
Confidence 3567777 5556788899998866433 4899999999887655443 32 34666677653
No 412
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=83.16 E-value=10 Score=35.51 Aligned_cols=59 Identities=19% Similarity=0.174 Sum_probs=42.6
Q ss_pred CCeEEEecCCCChHHHHHHHhcCC-CcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcch
Q 011036 262 GERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~-~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da 321 (495)
|.+|| +.-|.||...++|..+.. ...|+.+|++..++..+.+.....+-..+.++..|.
T Consensus 12 ~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~ 71 (252)
T 3f1l_A 12 DRIIL-VTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDL 71 (252)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCT
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 55666 455668888888876533 348999999999988877766665544567777776
No 413
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=82.93 E-value=8.5 Score=36.38 Aligned_cols=60 Identities=18% Similarity=0.270 Sum_probs=42.8
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEE-eCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAV-DRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~-D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+| .|+.+ +++..++..+.+..+..|. .+.++..|..+
T Consensus 4 ~k~vl-VTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 65 (258)
T 3oid_A 4 NKCAL-VTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQ 65 (258)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred CCEEE-EecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 55566 45567889999988664444 77775 9999988887777766553 46778888654
No 414
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=82.86 E-value=9.6 Score=36.32 Aligned_cols=61 Identities=18% Similarity=0.181 Sum_probs=44.7
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCC--ceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLK--CITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~--~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+ .+|+.+|++..++..+.+..+..+.. .+.++..|..+
T Consensus 11 ~k~vlV-TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~ 74 (281)
T 3svt_A 11 DRTYLV-TGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN 74 (281)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS
T ss_pred CCEEEE-eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC
Confidence 556664 456788899998865333 48999999999988887777766643 57778888644
No 415
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=82.78 E-value=10 Score=35.30 Aligned_cols=60 Identities=23% Similarity=0.258 Sum_probs=42.4
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeC-ChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~-s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+| +|+++++ +..++..+.+..+..+. .+.++..|..+
T Consensus 4 ~k~vl-VTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 65 (246)
T 2uvd_A 4 GKVAL-VTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADVAN 65 (246)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 55566 55677999999988664444 8999999 88887776666655553 46677787643
No 416
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=82.71 E-value=1.1 Score=44.67 Aligned_cols=50 Identities=20% Similarity=0.294 Sum_probs=33.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
++|++++=+.+|.|+-...++++.+.. .+|+++|++..|++.+ +++|.+.
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~~Ga~~ 212 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALL----KDIGAAH 212 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHH----HHHTCSE
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcCCCE
Confidence 667544447777787776665544322 3899999999997544 4677653
No 417
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=82.61 E-value=8.9 Score=36.09 Aligned_cols=57 Identities=23% Similarity=0.305 Sum_probs=39.2
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ .+|+.+|++..++..+ +++++- .+.++..|...
T Consensus 8 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~-~~~~~~~D~~~ 65 (259)
T 4e6p_A 8 GKSAL-ITGSARGIGRAFAEAYVREGATVAIADIDIERARQA---AAEIGP-AAYAVQMDVTR 65 (259)
T ss_dssp TCEEE-EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHHCT-TEEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHhCC-CceEEEeeCCC
Confidence 56666 4556789999998866434 4899999998876554 444442 46777777644
No 418
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=82.31 E-value=12 Score=35.65 Aligned_cols=60 Identities=18% Similarity=0.262 Sum_probs=41.8
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCC------------hHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRS------------HNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s------------~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+ ..|+.+|++ ..++..+.+..+..|. .+.++..|...
T Consensus 10 ~k~~lV-TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 82 (281)
T 3s55_A 10 GKTALI-TGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR-RCISAKVDVKD 82 (281)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEEE-eCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCC-eEEEEeCCCCC
Confidence 566664 455688899998866433 489999997 6666666666666653 46778888644
No 419
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=82.28 E-value=1.9 Score=47.29 Aligned_cols=44 Identities=9% Similarity=0.027 Sum_probs=30.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcC-----------CCcEEEEEeCChHHHHHHH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLR-----------DEGEVVAVDRSHNKVMDIQ 303 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~-----------~~G~ViA~D~s~~kv~~i~ 303 (495)
++.-+|||.|-|.|--...+.+... ..-+++++|+.+-...+++
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~ 111 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLA 111 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHH
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHH
Confidence 4456899999999998877766431 1257999999554444443
No 420
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=82.28 E-value=10 Score=35.59 Aligned_cols=59 Identities=20% Similarity=0.143 Sum_probs=41.1
Q ss_pred CeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 263 ERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 263 erVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.+|| +.-|.||...++|..+..+ .+|+++|++..++..+.+..+..|. .+.++..|..+
T Consensus 3 k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 62 (256)
T 1geg_A 3 KVAL-VTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSD 62 (256)
T ss_dssp CEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTS
T ss_pred CEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCC
Confidence 3444 4456788999998866434 4899999999888777666655553 46777777643
No 421
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=82.19 E-value=15 Score=35.32 Aligned_cols=60 Identities=13% Similarity=0.179 Sum_probs=39.9
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHH-HHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNK-VMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~k-v~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||=- -|.||...++|..+..+| .|+.+|++..+ ...+.+..+..|. .+.++..|..+
T Consensus 47 gk~vlVT-Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d 108 (291)
T 3ijr_A 47 GKNVLIT-GGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGDLSD 108 (291)
T ss_dssp TCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEESCTTS
T ss_pred CCEEEEe-CCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 5666654 456888889888664444 89999998764 4445555555553 46777888644
No 422
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=82.12 E-value=11 Score=35.89 Aligned_cols=60 Identities=18% Similarity=0.135 Sum_probs=44.4
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+++|++..++..+.+.++..|.. +..+..|...
T Consensus 28 ~k~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d 88 (270)
T 3ftp_A 28 KQVAI-VTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE-GRGAVLNVND 88 (270)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCC-CEEEECCTTC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEEeCCC
Confidence 55666 5667788999998766333 48999999999998888877777643 5667777643
No 423
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=82.03 E-value=8.6 Score=36.19 Aligned_cols=61 Identities=18% Similarity=0.173 Sum_probs=44.0
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHh--CCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEM--GLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~--gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+.+|++..++..+.+.+... +...+.++..|...
T Consensus 7 ~k~~l-VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 70 (250)
T 3nyw_A 7 KGLAI-ITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD 70 (250)
T ss_dssp CCEEE-EESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC
Confidence 45555 4556688888888866433 48999999999998887777665 33457788888654
No 424
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=81.86 E-value=10 Score=35.67 Aligned_cols=60 Identities=22% Similarity=0.345 Sum_probs=41.5
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHHHHHHHHHHHHh-CCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEM-GLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~kv~~i~~~a~~~-gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+| +|+++|++..++..+.+..+.. |. .+.++..|..+
T Consensus 7 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~ 68 (263)
T 3ai3_A 7 GKVAV-ITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVDVAT 68 (263)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTS
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCC
Confidence 55666 55567889999988664344 8999999998877665554433 43 46777787644
No 425
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=81.69 E-value=12 Score=36.29 Aligned_cols=61 Identities=15% Similarity=0.327 Sum_probs=43.6
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCC--ceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLK--CITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~--~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+++|++..++..+.+.+...|.. .+.++..|..+
T Consensus 26 ~k~vl-VTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d 89 (297)
T 1xhl_A 26 GKSVI-ITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE 89 (297)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC
Confidence 55666 5556788999998866433 48999999999888776666655531 47778888644
No 426
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=81.49 E-value=15 Score=33.57 Aligned_cols=59 Identities=20% Similarity=0.296 Sum_probs=40.1
Q ss_pred eEEEecCCCChHHHHHHHhcCCCc-EEEEE-eCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 264 RILDMCAAPGGKTTAIASLLRDEG-EVVAV-DRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 264 rVLDmCAaPGgKT~~iA~lm~~~G-~ViA~-D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
+|| +.-|.||...+++..+..+| +|+++ +++..+...+.+..+..+......+..|...
T Consensus 3 ~vl-ITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 63 (245)
T 2ph3_A 3 KAL-ITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63 (245)
T ss_dssp EEE-ETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTS
T ss_pred EEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCC
Confidence 455 45567999999988664445 88888 8999888777666665554333327777643
No 427
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=81.44 E-value=19 Score=34.66 Aligned_cols=61 Identities=16% Similarity=0.153 Sum_probs=43.5
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc----EEEEEeCChHHHHHHHHHHHHhC-CCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG----EVVAVDRSHNKVMDIQKLAAEMG-LKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G----~ViA~D~s~~kv~~i~~~a~~~g-l~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+| .|+.++++..++..+.+..+... -..+.++.+|..+
T Consensus 33 ~k~~lV-TGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d 98 (287)
T 3rku_A 33 KKTVLI-TGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ 98 (287)
T ss_dssp TCEEEE-ESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTC
T ss_pred CCEEEE-ecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCC
Confidence 566774 4556888889887664334 89999999999888777666542 2347778888643
No 428
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=81.43 E-value=10 Score=36.20 Aligned_cols=60 Identities=22% Similarity=0.245 Sum_probs=43.3
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+.+|++..++..+.+.++..|- .+.++..|...
T Consensus 4 ~k~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 64 (264)
T 3tfo_A 4 DKVIL-ITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTD 64 (264)
T ss_dssp TCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTC
T ss_pred CCEEE-EeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 44555 4555688888998866333 4899999999999888777776653 46677777644
No 429
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=81.23 E-value=11 Score=36.40 Aligned_cols=60 Identities=18% Similarity=0.136 Sum_probs=40.8
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCC--hHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRS--HNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s--~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+| .|+.+|++ ..+...+.+..+..|. .+.++..|...
T Consensus 49 ~k~vlV-TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d 111 (294)
T 3r3s_A 49 DRKALV-TGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPGDLSD 111 (294)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTC-CEEECCCCTTS
T ss_pred CCEEEE-eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCC-cEEEEEecCCC
Confidence 556664 4457889999988664444 89999987 4556667777776663 46667777643
No 430
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=81.21 E-value=7.9 Score=36.51 Aligned_cols=60 Identities=23% Similarity=0.297 Sum_probs=42.4
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+| .|+.+|++..++..+.+..+..|. .+.++..|..+
T Consensus 7 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 67 (262)
T 1zem_A 7 GKVCL-VTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV-EARSYVCDVTS 67 (262)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCC
Confidence 55666 55567889999988664444 899999999888776665554443 46777787643
No 431
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=81.14 E-value=8.1 Score=36.43 Aligned_cols=60 Identities=17% Similarity=0.172 Sum_probs=44.5
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+| +|+.+|++..+...+.+..+..|- .+.++..|..+
T Consensus 12 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d 72 (256)
T 3gaf_A 12 DAVAI-VTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTD 72 (256)
T ss_dssp TCEEE-ECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 55666 45567889999988664444 899999999999888877777663 46778888654
No 432
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=81.06 E-value=7 Score=37.13 Aligned_cols=60 Identities=22% Similarity=0.321 Sum_probs=43.0
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHH-hCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAE-MGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~-~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+.+|++..++..+.+..++ .+ ..+.++..|..+
T Consensus 20 ~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~ 81 (266)
T 4egf_A 20 GKRAL-ITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG-TDVHTVAIDLAE 81 (266)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTS
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCC
Confidence 55666 4556788898998866433 4899999999998877666655 44 347788888643
No 433
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=80.94 E-value=5.9 Score=38.00 Aligned_cols=60 Identities=15% Similarity=0.068 Sum_probs=42.8
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+ ..|+++|++..++..+.+.++..|. .+.++..|...
T Consensus 24 ~k~~lV-TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 84 (279)
T 3sju_A 24 PQTAFV-TGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTS 84 (279)
T ss_dssp -CEEEE-ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred CCEEEE-eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 556664 456688888888766433 4899999999998887776666553 47778888644
No 434
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=80.93 E-value=16 Score=34.76 Aligned_cols=60 Identities=18% Similarity=0.160 Sum_probs=40.2
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCC-hHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRS-HNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s-~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||=- -|.||...++|..+..+| .|+.+|++ ..+...+.+..+..|- .+.++..|..+
T Consensus 31 gk~~lVT-Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 92 (271)
T 3v2g_A 31 GKTAFVT-GGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRD 92 (271)
T ss_dssp TCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEEEe-CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 6666654 456888888888664444 78887654 5677777666666654 46677888644
No 435
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=80.93 E-value=11 Score=35.57 Aligned_cols=60 Identities=17% Similarity=0.268 Sum_probs=42.4
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ .+|+.+|++..++..+.+..+..+ ..+.++..|..+
T Consensus 6 ~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~ 66 (257)
T 3imf_A 6 EKVVI-ITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP-GQILTVQMDVRN 66 (257)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST-TCEEEEECCTTC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCC
Confidence 55666 4556788999998866434 489999999998877766555444 247778888654
No 436
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=80.85 E-value=5.9 Score=37.39 Aligned_cols=60 Identities=23% Similarity=0.296 Sum_probs=39.4
Q ss_pred CCeEEEecCC-CChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAA-PGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAa-PGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||=-+|+ .||...++|..+..+ .+|+++|++...-..+.++.++.+ .+.++..|..+
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~ 69 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG--GALLFRADVTQ 69 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT--CCEEEECCTTC
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEECCCCC
Confidence 5677777765 389999998866433 489999999853333444444444 25677777644
No 437
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=80.72 E-value=9.6 Score=35.91 Aligned_cols=61 Identities=21% Similarity=0.233 Sum_probs=37.4
Q ss_pred CCCeEEEecCCC-ChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCAAP-GGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaP-GgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.|.+||=-+|+. ||...++|..+..+ .+|+.+|++......+.++.+..+- ..++..|..+
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~--~~~~~~D~~~ 70 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGS--DIVLQCDVAE 70 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEECCTTC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCC--cEEEEccCCC
Confidence 366788666653 89999998866433 4899999987222233333333332 3566677543
No 438
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=80.52 E-value=9.3 Score=35.11 Aligned_cols=60 Identities=23% Similarity=0.181 Sum_probs=42.1
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHH-HhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAA-EMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~-~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+.++++..++..+.+... ..| ..+.++..|..+
T Consensus 2 ~k~vl-ITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~ 63 (235)
T 3l77_A 2 MKVAV-ITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVSK 63 (235)
T ss_dssp CCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CeEEEEEeccCC
Confidence 34455 4556788899998866434 489999999999887766554 444 347778888654
No 439
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=80.28 E-value=6.1 Score=39.36 Aligned_cols=56 Identities=16% Similarity=0.227 Sum_probs=33.1
Q ss_pred hcCCCCCCeEEEecCC--CChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 256 ALDPQKGERILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 256 ~LdpqpGerVLDmCAa--PGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
..++++|++||=.+|+ -|--+.++|..++ .+++++..+..+....++.++++|.+.
T Consensus 162 ~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~~~~~~~~~~~lGa~~ 219 (357)
T 1zsy_A 162 FEQLQPGDSVIQNASNSGVGQAVIQIAAALG--LRTINVVRDRPDIQKLSDRLKSLGAEH 219 (357)
T ss_dssp SSCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEECCCSCHHHHHHHHHHTTCSE
T ss_pred HhccCCCCEEEEeCCcCHHHHHHHHHHHHcC--CEEEEEecCccchHHHHHHHHhcCCcE
Confidence 3578999999988762 3444555666553 345555433322222345677888764
No 440
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=80.27 E-value=2.5 Score=42.60 Aligned_cols=51 Identities=20% Similarity=0.192 Sum_probs=36.8
Q ss_pred cCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 257 LDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 257 LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
+.+++|++||-.+||+ |-.+.++|..++ .+|+++|++..|++. ++++|.+.
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~~~~~~~----a~~lGa~~ 241 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTSEAKREA----AKALGADE 241 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSGGGHHH----HHHHTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHH----HHHcCCcE
Confidence 4789999999998754 344555565553 369999999999754 45578764
No 441
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=80.11 E-value=13 Score=35.38 Aligned_cols=60 Identities=18% Similarity=0.218 Sum_probs=42.0
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHHHHHHHHHHHH-hCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAE-MGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~kv~~i~~~a~~-~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+| .|+.+|++..++..+.+.... .| ..+.++..|..+
T Consensus 27 ~k~~lV-TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~ 88 (277)
T 4fc7_A 27 DKVAFI-TGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-RRCLPLSMDVRA 88 (277)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTC
T ss_pred CCEEEE-eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEcCCCC
Confidence 566664 5556889999988664444 899999999888766555433 34 346778888654
No 442
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=80.11 E-value=7.3 Score=36.04 Aligned_cols=60 Identities=20% Similarity=0.236 Sum_probs=42.9
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCC-hHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRS-HNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s-~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...+++..+..+| +|+++|++ ..++..+.+..+..+ ..+.++..|..+
T Consensus 7 ~k~vl-VTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~ 68 (258)
T 3afn_B 7 GKRVL-ITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG-GDAAFFAADLAT 68 (258)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT-CEEEEEECCTTS
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC-CceEEEECCCCC
Confidence 56777 55667999999988664344 89999999 777776666555544 347778888644
No 443
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=79.79 E-value=25 Score=33.53 Aligned_cols=60 Identities=22% Similarity=0.134 Sum_probs=40.2
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEE-Ecch
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTY-KLDA 321 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~-~~Da 321 (495)
.|.+||= .-|.|+.+.+++..+..+ -+|++++++..+...+.+..+...-..++++ ..|.
T Consensus 10 ~~~~vlV-TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 71 (342)
T 1y1p_A 10 EGSLVLV-TGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM 71 (342)
T ss_dssp TTCEEEE-ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCT
T ss_pred CCCEEEE-ECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCC
Confidence 4677874 556799999998755333 4899999999887666554433211346666 5665
No 444
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=79.76 E-value=16 Score=34.19 Aligned_cols=60 Identities=15% Similarity=0.125 Sum_probs=42.8
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...+++..+..+ ..|++++++..++..+.+..+..+. .+..+..|...
T Consensus 14 ~k~vl-ITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 74 (266)
T 1xq1_A 14 AKTVL-VTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASL 74 (266)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTS
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eeEEEECCCCC
Confidence 55666 5566889999998865333 4899999999888777666655553 36777777643
No 445
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=79.51 E-value=18 Score=33.86 Aligned_cols=60 Identities=27% Similarity=0.256 Sum_probs=42.2
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+| +|+++|++..++..+.+.++..|. .+..+..|..+
T Consensus 14 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~ 74 (260)
T 2zat_A 14 NKVAL-VTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL-SVTGTVCHVGK 74 (260)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCC
Confidence 55666 45667899999988664444 899999999888776665555553 36677777543
No 446
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=79.44 E-value=11 Score=35.79 Aligned_cols=61 Identities=15% Similarity=0.308 Sum_probs=42.5
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCC--ceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLK--CITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~--~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ .+|+++|++..++..+.+..+..+.. .+.++..|..+
T Consensus 6 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 69 (280)
T 1xkq_A 6 NKTVI-ITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT 69 (280)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC
Confidence 45555 4556788898988866434 48999999998887766655544431 47778888654
No 447
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=78.94 E-value=11 Score=34.71 Aligned_cols=58 Identities=16% Similarity=0.210 Sum_probs=38.8
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...+++..+..+ .+|+++|++..++..+. ++++-..+..+..|...
T Consensus 11 ~k~vl-ITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~D~~~ 69 (254)
T 2wsb_A 11 GACAA-VTGAGSGIGLEICRAFAASGARLILIDREAAALDRAA---QELGAAVAARIVADVTD 69 (254)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHGGGEEEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHhcccceeEEEEecCC
Confidence 55676 4556789999998866444 48999999988766543 33342222777777643
No 448
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=78.92 E-value=8.7 Score=36.77 Aligned_cols=59 Identities=19% Similarity=0.169 Sum_probs=39.7
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ .+|+++|++..++..+.+.++..| .+.++..|..+
T Consensus 29 ~k~vl-VTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d 88 (276)
T 2b4q_A 29 GRIAL-VTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLSS 88 (276)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTS
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCC
Confidence 55666 4556788999998866433 489999999988766554443333 46666677543
No 449
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=78.68 E-value=11 Score=35.96 Aligned_cols=60 Identities=18% Similarity=0.145 Sum_probs=43.6
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+.+|++..+...+.+..+..|- .+.++..|...
T Consensus 33 gk~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 93 (275)
T 4imr_A 33 GRTAL-VTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGG-TAQELAGDLSE 93 (275)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTC-CEEEEECCTTS
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-eEEEEEecCCC
Confidence 66666 4556788888888866333 4899999999988887777766553 46777877643
No 450
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=78.67 E-value=4.7 Score=40.07 Aligned_cols=51 Identities=22% Similarity=0.181 Sum_probs=31.7
Q ss_pred hcCCCCCCeEEEecCCCChHHHHHHHhcCC--CcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 256 ALDPQKGERILDMCAAPGGKTTAIASLLRD--EGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaPGgKT~~iA~lm~~--~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
..++++|++||=.+|+ |+-....+++.+. ..+|++.+ +..|.. .++ +|.+.
T Consensus 137 ~~~~~~g~~VlV~Ga~-G~vG~~a~qla~~~g~~~V~~~~-~~~~~~----~~~-~ga~~ 189 (349)
T 4a27_A 137 VANLREGMSVLVHSAG-GGVGQAVAQLCSTVPNVTVFGTA-STFKHE----AIK-DSVTH 189 (349)
T ss_dssp TSCCCTTCEEEESSTT-SHHHHHHHHHHTTSTTCEEEEEE-CGGGHH----HHG-GGSSE
T ss_pred hcCCCCCCEEEEEcCC-cHHHHHHHHHHHHcCCcEEEEeC-CHHHHH----HHH-cCCcE
Confidence 4578999999987764 5555444444332 34899998 555543 233 66653
No 451
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=78.66 E-value=22 Score=33.81 Aligned_cols=60 Identities=17% Similarity=0.140 Sum_probs=39.3
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHH-HHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNK-VMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~k-v~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+| +|++++++..+ ...+.+.++..|. .+.++..|...
T Consensus 29 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 90 (283)
T 1g0o_A 29 GKVAL-VTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGV 90 (283)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCCC
Confidence 55666 45567889999988664444 89999998754 4444454555453 36677777643
No 452
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=78.03 E-value=13 Score=34.73 Aligned_cols=55 Identities=22% Similarity=0.317 Sum_probs=37.4
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...+++..+..+ .+|+++|++..++..+ +++.| +.++..|...
T Consensus 5 ~k~vl-VTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~---~~~~~~D~~~ 60 (245)
T 1uls_A 5 DKAVL-ITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA---AEAVG---AHPVVMDVAD 60 (245)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHTTT---CEEEECCTTC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHcC---CEEEEecCCC
Confidence 55666 4556788999998866433 4899999998776544 33444 5667777643
No 453
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=78.01 E-value=30 Score=31.57 Aligned_cols=56 Identities=27% Similarity=0.316 Sum_probs=37.0
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
.|.+|| +.-|.||...+++..+..+ .+|+++|++..++..+.+ +. ..++++..|..
T Consensus 6 ~~~~vl-VTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~---~~--~~~~~~~~D~~ 62 (244)
T 1cyd_A 6 SGLRAL-VTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK---EC--PGIEPVCVDLG 62 (244)
T ss_dssp TTCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HS--TTCEEEECCTT
T ss_pred CCCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hc--cCCCcEEecCC
Confidence 356676 4556799999998866333 489999999887654433 22 23555666654
No 454
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=77.95 E-value=31 Score=31.81 Aligned_cols=56 Identities=18% Similarity=0.268 Sum_probs=40.5
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhHH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~~ 324 (495)
|.+|| +.-|.||...++|..+...+.|++++++..++..+.+ +..+..+..|..+.
T Consensus 5 ~k~vl-ITGas~gIG~~~a~~l~~g~~v~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~ 60 (245)
T 3e9n_A 5 KKIAV-VTGATGGMGIEIVKDLSRDHIVYALGRNPEHLAALAE------IEGVEPIESDIVKE 60 (245)
T ss_dssp -CEEE-EESTTSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHT------STTEEEEECCHHHH
T ss_pred CCEEE-EEcCCCHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHh------hcCCcceecccchH
Confidence 44555 4556788999998877667899999999988765433 34578888887664
No 455
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=77.86 E-value=11 Score=34.53 Aligned_cols=56 Identities=23% Similarity=0.287 Sum_probs=38.3
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
+.+|| +.-|.||...+++..+..+| +|++++++..++..+. ++++ .+..+..|..+
T Consensus 5 ~k~vl-VtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~~--~~~~~~~D~~~ 61 (234)
T 2ehd_A 5 KGAVL-ITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALA---AELE--GALPLPGDVRE 61 (234)
T ss_dssp CCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHST--TCEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHhh--hceEEEecCCC
Confidence 44566 56678999999988664444 8999999988765543 3332 46677777643
No 456
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=77.45 E-value=14 Score=34.09 Aligned_cols=59 Identities=19% Similarity=0.206 Sum_probs=39.3
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...+++..+..+ .+|+++|++..+...+.+.... ...+.++..|..+
T Consensus 6 ~k~vl-VtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~ 65 (251)
T 1zk4_A 6 GKVAI-ITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDSSD 65 (251)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTC
T ss_pred CcEEE-EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc--cCceEEEECCCCC
Confidence 55566 5566889999998765333 4899999998876654433221 1357778888643
No 457
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=77.36 E-value=6.9 Score=37.10 Aligned_cols=60 Identities=18% Similarity=0.256 Sum_probs=38.9
Q ss_pred CCCeEEEecC-CCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCA-APGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCA-aPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.|.+||=-+| |.||...++|..+... ..|+.+|++..+. +.+.+++++- .+.++..|..+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~-~~~~~~~Dv~~ 67 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL--IQRITDRLPA-KAPLLELDVQN 67 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH--HHHHHTTSSS-CCCEEECCTTC
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH--HHHHHHhcCC-CceEEEccCCC
Confidence 3667887777 4899999998866433 4899999997652 1233333332 35566777543
No 458
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=77.15 E-value=18 Score=33.05 Aligned_cols=51 Identities=18% Similarity=0.201 Sum_probs=33.9
Q ss_pred ecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchh
Q 011036 268 MCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (495)
Q Consensus 268 mCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~ 322 (495)
+.-|.||...++|..+..+ ..|+.+|++..++..+. ++++ ..+.++..|..
T Consensus 6 VTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~~-~~~~~~~~D~~ 57 (230)
T 3guy_A 6 ITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVT---NCLS-NNVGYRARDLA 57 (230)
T ss_dssp EESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH---HTCS-SCCCEEECCTT
T ss_pred EecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHh-hccCeEeecCC
Confidence 3456788999998866333 48999999998876543 3332 23556666654
No 459
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=77.07 E-value=17 Score=34.46 Aligned_cols=61 Identities=21% Similarity=0.322 Sum_probs=44.7
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...+++..+..+ .+|++++++..++..+.+.++..|.. .+.++.+|...
T Consensus 32 ~k~vl-VTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 94 (279)
T 1xg5_A 32 DRLAL-VTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94 (279)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC
Confidence 55666 4556789999998765433 48999999999988887777776653 47778888643
No 460
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=77.03 E-value=13 Score=35.40 Aligned_cols=60 Identities=15% Similarity=0.167 Sum_probs=43.5
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+.+|++..++..+.+.++..|- .+.++..|..+
T Consensus 26 gk~~l-VTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 86 (271)
T 4ibo_A 26 GRTAL-VTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTS 86 (271)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCC
Confidence 55666 4556788999998866433 4899999999998888777766653 46677777643
No 461
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=76.96 E-value=19 Score=34.16 Aligned_cols=60 Identities=25% Similarity=0.204 Sum_probs=42.6
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+| +|+++|++..++..+.+.++..|. .+.++..|..+
T Consensus 22 ~k~vlV-TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~ 82 (277)
T 2rhc_B 22 SEVALV-TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRS 82 (277)
T ss_dssp SCEEEE-ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEEE-ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCC
Confidence 556664 4457889999988664444 899999999888777666655553 46777787643
No 462
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=76.76 E-value=20 Score=34.65 Aligned_cols=60 Identities=23% Similarity=0.164 Sum_probs=42.3
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ .+|+++|++..++..+.+.++..|. .+.++..|..+
T Consensus 34 ~k~vl-VTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 94 (291)
T 3cxt_A 34 GKIAL-VTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGI-NAHGYVCDVTD 94 (291)
T ss_dssp TCEEE-EETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEecCCC
Confidence 55666 4556788999998765433 4899999999888777666655553 36677777643
No 463
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=76.66 E-value=2.1 Score=38.58 Aligned_cols=52 Identities=23% Similarity=0.282 Sum_probs=35.2
Q ss_pred hcCCCCCCeEEEecCCCChHHHHHHHhcCC-CcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 256 ALDPQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 256 ~LdpqpGerVLDmCAaPGgKT~~iA~lm~~-~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
..++++|++||..+| .||....++++... ..+|+++|++..+...+ +++|..
T Consensus 33 ~~~~~~g~~vlV~Ga-~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~ 85 (198)
T 1pqw_A 33 VGRLSPGERVLIHSA-TGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVE 85 (198)
T ss_dssp TSCCCTTCEEEETTT-TSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCS
T ss_pred HhCCCCCCEEEEeeC-CChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCC
Confidence 347899999998875 35555555554432 24899999999887544 445654
No 464
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=76.59 E-value=13 Score=34.22 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=41.1
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEE-eCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAV-DRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~-D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...+++..+..+| +|+++ +++..++..+.+..+..+. .+.++..|..+
T Consensus 5 ~~~vl-ItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 66 (247)
T 2hq1_A 5 GKTAI-VTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGI-NVVVAKGDVKN 66 (247)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTC-CEEEEESCTTS
T ss_pred CcEEE-EECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 55666 45567999999988664444 89988 6777777766666555543 46777888643
No 465
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=76.42 E-value=12 Score=35.34 Aligned_cols=61 Identities=23% Similarity=0.305 Sum_probs=43.5
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCC------------hHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRS------------HNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s------------~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.|.+||= .-|.||...++|..+..+ ..|+++|++ ..++..+.+..+..+- .+.++..|..+
T Consensus 12 ~gk~vlV-TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 85 (278)
T 3sx2_A 12 TGKVAFI-TGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRD 85 (278)
T ss_dssp TTCEEEE-ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTC
T ss_pred CCCEEEE-ECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCC
Confidence 3566664 556788888888866433 489999987 7777777776666663 47788888754
No 466
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=76.11 E-value=22 Score=33.45 Aligned_cols=60 Identities=20% Similarity=0.306 Sum_probs=39.5
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEe-CChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVD-RSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D-~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
+.+|| +.-|.||...++|..+...| .|+.+| ++..+.....+..+..+ ..+.++..|..+
T Consensus 25 ~k~vl-ITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~ 86 (269)
T 3gk3_A 25 KRVAF-VTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAG-RDFKAYAVDVAD 86 (269)
T ss_dssp CCEEE-ETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTT-CCCEEEECCTTC
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC-CceEEEEecCCC
Confidence 55566 56667899999988664444 888888 66666555544444433 347778888644
No 467
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=76.03 E-value=17 Score=34.02 Aligned_cols=60 Identities=18% Similarity=0.225 Sum_probs=40.2
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHH-HHHHHHHHHHh-CCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNK-VMDIQKLAAEM-GLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~k-v~~i~~~a~~~-gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+| +|+++|++..+ +..+.+..... |. .+.++..|..+
T Consensus 4 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 66 (260)
T 1x1t_A 4 GKVAV-VTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYDGADLSK 66 (260)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS-CEEEECCCTTS
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCC-cEEEEECCCCC
Confidence 45565 45567889999988664344 89999999887 76665554443 43 36677777643
No 468
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=75.93 E-value=22 Score=34.65 Aligned_cols=60 Identities=22% Similarity=0.333 Sum_probs=41.7
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCC------------hHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRS------------HNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s------------~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+++|++ ..++..+.+.++..|. .+.++..|...
T Consensus 46 gk~~l-VTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d 118 (317)
T 3oec_A 46 GKVAF-ITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR-RIIARQADVRD 118 (317)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCC
Confidence 55566 4556788898988866433 489999987 6677766666666653 46778888644
No 469
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=75.65 E-value=11 Score=34.40 Aligned_cols=57 Identities=12% Similarity=0.195 Sum_probs=39.0
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc---EEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG---EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G---~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
+.+|| +.-|.||...+++..+..+| .|+++|++..++..+.+. .-..+.++..|...
T Consensus 3 ~k~vl-ItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~----~~~~~~~~~~D~~~ 62 (250)
T 1yo6_A 3 PGSVV-VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI----KDSRVHVLPLTVTC 62 (250)
T ss_dssp CSEEE-ESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC----CCTTEEEEECCTTC
T ss_pred CCEEE-EecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc----cCCceEEEEeecCC
Confidence 44566 45567899999988664444 899999999887655332 22357778888643
No 470
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=75.58 E-value=26 Score=33.13 Aligned_cols=61 Identities=18% Similarity=0.265 Sum_probs=41.6
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHH-HHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLA-AEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a-~~~gl~~i~~~~~Da~~ 323 (495)
.|.+|| +.-|.||...++|..+..+ .+|++++++..++..+.+.. +..|. .+.++..|..+
T Consensus 20 ~~k~~l-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~ 82 (267)
T 1vl8_A 20 RGRVAL-VTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSN 82 (267)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTC
T ss_pred CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCC
Confidence 355666 4556789999998866434 48999999998877665544 34453 36677777643
No 471
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=75.55 E-value=25 Score=34.55 Aligned_cols=60 Identities=18% Similarity=0.034 Sum_probs=42.5
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEe-CChHHHHHHHHHHH-HhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVD-RSHNKVMDIQKLAA-EMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D-~s~~kv~~i~~~a~-~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+.+| ++..++..+.+.++ ..| ..+.++.+|...
T Consensus 46 ~k~~l-VTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~d 108 (328)
T 2qhx_A 46 VPVAL-VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSN 108 (328)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSS
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC-CeEEEEEeeCCC
Confidence 55666 5666789999998866333 4899999 99988877766554 444 347778888643
No 472
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=75.43 E-value=15 Score=34.69 Aligned_cols=60 Identities=23% Similarity=0.227 Sum_probs=41.9
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeC-ChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~-s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ .+|+.+++ +..+...+.+..+..|. .+.++..|...
T Consensus 29 ~k~vl-ITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 90 (271)
T 4iin_A 29 GKNVL-ITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGY-KAAVIKFDAAS 90 (271)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCCCC
Confidence 56666 4556788888888766433 48999999 56666667777766653 46778888644
No 473
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=75.40 E-value=18 Score=34.36 Aligned_cols=60 Identities=22% Similarity=0.294 Sum_probs=41.6
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeC-------------ChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDR-------------SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~-------------s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+++|+ +..++..+.+..+..+. .+.++..|...
T Consensus 11 ~k~~l-VTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 84 (277)
T 3tsc_A 11 GRVAF-ITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVDTRD 84 (277)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCC
Confidence 55666 4556688888888766433 48999999 67777777666666553 46777787644
No 474
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=75.39 E-value=17 Score=33.82 Aligned_cols=56 Identities=18% Similarity=0.202 Sum_probs=38.7
Q ss_pred CeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 263 ERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 263 erVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.+|| +.-|.||...++|..+..+ ..|+++|++..++..+.+.. +- .+.++..|..+
T Consensus 4 k~vl-VTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~ 60 (235)
T 3l6e_A 4 GHII-VTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GN-AVIGIVADLAH 60 (235)
T ss_dssp CEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GG-GEEEEECCTTS
T ss_pred CEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cC-CceEEECCCCC
Confidence 3455 4456788999998766433 48999999998877655443 32 47788888654
No 475
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=75.35 E-value=5.5 Score=38.12 Aligned_cols=61 Identities=18% Similarity=0.233 Sum_probs=46.7
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||.+.+++..+..+ .+|+++|++..++..+.+.+++.|-..+.++..|...
T Consensus 28 ~k~vl-ITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 89 (286)
T 1xu9_A 28 GKKVI-VTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED 89 (286)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 66777 5556788999998765333 4899999999999888777777776568888888754
No 476
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=75.05 E-value=23 Score=32.90 Aligned_cols=60 Identities=20% Similarity=0.190 Sum_probs=41.2
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeC-ChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~-s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
+.+|| +.-|.||...++|..+..+| +|+.+|+ +..+...+.+..+..|. .+.++..|...
T Consensus 4 ~k~~l-VTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d 65 (246)
T 3osu_A 4 TKSAL-VTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANVAD 65 (246)
T ss_dssp SCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTS-CEEEEECCTTC
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEccCCC
Confidence 44455 45667899999988664444 7888887 56777777777766654 36677777644
No 477
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=74.70 E-value=21 Score=33.01 Aligned_cols=60 Identities=20% Similarity=0.161 Sum_probs=44.1
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+ .+|+++|++..++..+.+..+..+- .+.++.+|...
T Consensus 9 ~k~vlI-TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 69 (253)
T 3qiv_A 9 NKVGIV-TGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVSD 69 (253)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTS
T ss_pred CCEEEE-ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEccCCC
Confidence 556664 556788888998866433 4899999999999888777776653 46777888654
No 478
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=74.66 E-value=23 Score=34.06 Aligned_cols=60 Identities=17% Similarity=0.134 Sum_probs=44.2
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.++|= .-|.+|....+|..+..+ ..|+.+|++..++....+.+++.|.+ +.++..|..+
T Consensus 9 gKvalV-TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~-~~~~~~Dv~~ 69 (255)
T 4g81_D 9 GKTALV-TGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD-AHGVAFDVTD 69 (255)
T ss_dssp TCEEEE-TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCC-EEECCCCTTC
T ss_pred CCEEEE-eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEeeCCC
Confidence 555554 556678888888876444 48999999999998888877777754 5667777644
No 479
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=74.63 E-value=12 Score=37.61 Aligned_cols=47 Identities=19% Similarity=0.040 Sum_probs=33.1
Q ss_pred CCCCeEEEecCC--CChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 260 QKGERILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 260 qpGerVLDmCAa--PGgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
++|++||=.+|+ -|.-+.++|.+++ .+|+++. +..|++ +++++|.+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G--a~Vi~~~-~~~~~~----~~~~lGa~~ 211 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG--YIPIATC-SPHNFD----LAKSRGAEE 211 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEE-CGGGHH----HHHHTTCSE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC--CEEEEEe-CHHHHH----HHHHcCCcE
Confidence 899999988763 4555666666654 3788885 777754 567788753
No 480
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=74.58 E-value=17 Score=34.92 Aligned_cols=61 Identities=20% Similarity=0.122 Sum_probs=42.4
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
.|.+||= .-|.||...++|..+... ..|+.+|++..++..+.+.....|- .+.++..|..+
T Consensus 27 ~~k~~lV-TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 88 (283)
T 3v8b_A 27 PSPVALI-TGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG-QAIALEADVSD 88 (283)
T ss_dssp CCCEEEE-ESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTC-CEEEEECCTTC
T ss_pred CCCEEEE-ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCC
Confidence 3556664 556788888888766433 4899999999888776665554442 46777888644
No 481
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=74.55 E-value=26 Score=33.74 Aligned_cols=60 Identities=18% Similarity=0.292 Sum_probs=42.1
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCC------------hHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRS------------HNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s------------~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+ ..|+++|++ ..++..+.+.++..|- .+.++..|..+
T Consensus 28 gk~~lV-TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 100 (299)
T 3t7c_A 28 GKVAFI-TGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-RIIASQVDVRD 100 (299)
T ss_dssp TCEEEE-ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEEE-ECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCC-ceEEEECCCCC
Confidence 556664 555678888888766433 489999987 6777777666666653 47788888754
No 482
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=74.45 E-value=24 Score=33.80 Aligned_cols=57 Identities=21% Similarity=0.257 Sum_probs=38.5
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+ .+|+.+|++..++..+. ++++. .+.++..|..+
T Consensus 29 gk~vlV-TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~~~~-~~~~~~~Dv~d 86 (277)
T 3gvc_A 29 GKVAIV-TGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAA---TKIGC-GAAACRVDVSD 86 (277)
T ss_dssp TCEEEE-TTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HHHCS-SCEEEECCTTC
T ss_pred CCEEEE-ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHcCC-cceEEEecCCC
Confidence 556664 556688888888765333 48999999988776543 44443 36677777644
No 483
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=74.19 E-value=14 Score=35.11 Aligned_cols=60 Identities=20% Similarity=0.174 Sum_probs=41.2
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEE-eCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAV-DRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~-D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+| .|+.+ +++..+...+.+..+..|- .+.++..|...
T Consensus 27 ~k~~l-VTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~ 88 (267)
T 3u5t_A 27 NKVAI-VTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADVSD 88 (267)
T ss_dssp CCEEE-EESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCC
Confidence 55666 55567888888887664444 67766 6677777777777776663 46777788644
No 484
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=73.79 E-value=20 Score=33.54 Aligned_cols=57 Identities=23% Similarity=0.251 Sum_probs=38.4
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+ .+|+++|++..+...+.+... ..+..+..|..+
T Consensus 9 gk~~lV-TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d 66 (248)
T 3op4_A 9 GKVALV-TGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----DNGKGMALNVTN 66 (248)
T ss_dssp TCEEEE-SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----GGEEEEECCTTC
T ss_pred CCEEEE-eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----ccceEEEEeCCC
Confidence 556664 555688888888866433 489999999988766544432 235667777643
No 485
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=73.75 E-value=17 Score=34.01 Aligned_cols=58 Identities=19% Similarity=0.284 Sum_probs=39.4
Q ss_pred CCeEEEecCCCChHHHHHHHhcCC-CcEEEEEeCChHHHHHHHHHHHHhCCC-ceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~-~G~ViA~D~s~~kv~~i~~~a~~~gl~-~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...+++..+.. ..+|+++|++..+...+ +++++-. .+.++..|..+
T Consensus 16 ~k~vl-ITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~ 75 (278)
T 2bgk_A 16 DKVAI-ITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKV---CNNIGSPDVISFVHCDVTK 75 (278)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHHCCTTTEEEEECCTTC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHH---HHHhCCCCceEEEECCCCC
Confidence 56777 455679999999876533 34899999998776544 3333322 57788888644
No 486
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=73.73 E-value=60 Score=30.44 Aligned_cols=60 Identities=22% Similarity=0.174 Sum_probs=42.2
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCC-CceEEEEcchh
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl-~~i~~~~~Da~ 322 (495)
|.+|| +.-|.||...++|..+..+ .+|+.+|++..++..+.+.....+. ..+..+..|..
T Consensus 10 ~k~~l-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~ 71 (267)
T 3t4x_A 10 GKTAL-VTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG 71 (267)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTT
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCC
Confidence 55666 4556788999998866433 4899999999998877766665542 34666777753
No 487
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=73.25 E-value=11 Score=35.14 Aligned_cols=60 Identities=18% Similarity=0.282 Sum_probs=38.2
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHH-HHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMD-IQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~-i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...+++..+..+ .+|++++++..+... +.++.++.+ ..+.++..|..+
T Consensus 14 ~k~vlI-TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~ 75 (265)
T 1h5q_A 14 NKTIIV-TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG-VKTKAYQCDVSN 75 (265)
T ss_dssp TEEEEE-ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT-CCEEEEECCTTC
T ss_pred CCEEEE-ECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcC-CeeEEEEeeCCC
Confidence 455664 456789999998865433 489999997655443 333334444 346778888643
No 488
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=73.17 E-value=3.4 Score=41.23 Aligned_cols=51 Identities=24% Similarity=0.238 Sum_probs=36.1
Q ss_pred cCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCCc
Q 011036 257 LDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (495)
Q Consensus 257 LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~~ 313 (495)
+++++|++||-.+||+ |..+.++|..++ .+|+++|++..|++. ++++|.+.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~----~~~lGa~~ 226 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKRED----AMKMGADH 226 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHH----HHHHTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHH----HHHcCCCE
Confidence 5789999999999833 333445555543 379999999998754 45578764
No 489
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=73.10 E-value=23 Score=32.89 Aligned_cols=57 Identities=25% Similarity=0.251 Sum_probs=38.8
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+ .+|+++|++..++..+.+ +++- .+.++..|...
T Consensus 9 ~k~vlI-TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~-~~~~~~~D~~~ 66 (261)
T 3n74_A 9 GKVALI-TGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG---EIGD-AALAVAADISK 66 (261)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHCT-TEEEEECCTTS
T ss_pred CCEEEE-ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH---HhCC-ceEEEEecCCC
Confidence 556664 455688888888765433 489999999988765544 4443 46777888644
No 490
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=73.03 E-value=26 Score=33.10 Aligned_cols=60 Identities=22% Similarity=0.217 Sum_probs=42.5
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+ .+|+++|++..++..+.+..+..|. .+.++..|..+
T Consensus 21 ~k~vlV-TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 81 (273)
T 1ae1_A 21 GTTALV-TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLS 81 (273)
T ss_dssp TCEEEE-ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCEEEE-ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCC
Confidence 556664 445788999998866434 4899999999888777666555553 36777787644
No 491
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=72.97 E-value=15 Score=35.14 Aligned_cols=61 Identities=15% Similarity=0.131 Sum_probs=41.1
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeC-ChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~-s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+||= .-|.||...++|..+..+ ..|+.+|+ +..++..+.+..+...-..+.++..|...
T Consensus 25 ~k~~lV-TGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d 87 (281)
T 3v2h_A 25 TKTAVI-TGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTK 87 (281)
T ss_dssp TCEEEE-ETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTC
T ss_pred CCEEEE-eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCC
Confidence 556664 456788899998866434 48999999 66777666665554433457777777644
No 492
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=72.80 E-value=11 Score=40.84 Aligned_cols=41 Identities=2% Similarity=0.005 Sum_probs=28.0
Q ss_pred CCCCeEEEecCCCChHHHHHHHhcC-----------CCcEEEEEeC---ChHHHH
Q 011036 260 QKGERILDMCAAPGGKTTAIASLLR-----------DEGEVVAVDR---SHNKVM 300 (495)
Q Consensus 260 qpGerVLDmCAaPGgKT~~iA~lm~-----------~~G~ViA~D~---s~~kv~ 300 (495)
++.-+|||+|-|.|--.....+... ..-+++++|. +..-+.
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~ 119 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLA 119 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHH
T ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHH
Confidence 3445899999999987666554431 1236899999 665554
No 493
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=72.67 E-value=32 Score=32.62 Aligned_cols=60 Identities=23% Similarity=0.139 Sum_probs=42.3
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeC-ChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDEG-EVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~-s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+| .|+.+|+ +..+...+.+..+..|- .+.++..|..+
T Consensus 28 ~k~vl-VTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d 89 (269)
T 4dmm_A 28 DRIAL-VTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG-EAFAVKADVSQ 89 (269)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTS
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 55666 45566889999988664444 8888898 77777777777766654 46777888654
No 494
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=72.56 E-value=19 Score=33.06 Aligned_cols=60 Identities=17% Similarity=0.209 Sum_probs=39.0
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHH-HHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLA-AEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a-~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...+++..+..+ .+|+++|++..++..+.+.. +..+ ..+.++..|..+
T Consensus 2 ~k~vl-ItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~ 63 (250)
T 2cfc_A 2 SRVAI-VTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVAD 63 (250)
T ss_dssp CCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG-GGEEEEECCTTC
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCC
Confidence 34555 3456788999998866433 48999999998876654433 2222 247777887644
No 495
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=72.35 E-value=19 Score=34.23 Aligned_cols=60 Identities=22% Similarity=0.293 Sum_probs=40.3
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCC----------------hHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRS----------------HNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s----------------~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+... ..|+++|++ ..++..+.+..+..+. .+.++..|..+
T Consensus 11 ~k~~l-VTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 87 (286)
T 3uve_A 11 GKVAF-VTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR-RIVTAEVDVRD 87 (286)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC-ceEEEEcCCCC
Confidence 55666 4555688888888866433 489999998 6666666555554443 47778888644
No 496
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=72.24 E-value=22 Score=32.47 Aligned_cols=54 Identities=22% Similarity=0.295 Sum_probs=38.2
Q ss_pred CCCeEEEecCCCChHHHHHHHhcCCCc-EEEEEeCChHHHHHHHHHHHHhCCCce-EEEEcchh
Q 011036 261 KGERILDMCAAPGGKTTAIASLLRDEG-EVVAVDRSHNKVMDIQKLAAEMGLKCI-TTYKLDAL 322 (495)
Q Consensus 261 pGerVLDmCAaPGgKT~~iA~lm~~~G-~ViA~D~s~~kv~~i~~~a~~~gl~~i-~~~~~Da~ 322 (495)
.|.+|| +.-|.|+...+++..+..+| +|++++|+..++..+.. . .+ +++..|..
T Consensus 20 ~~~~il-VtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~---~~~~~~~~Dl~ 75 (236)
T 3e8x_A 20 QGMRVL-VVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R---GASDIVVANLE 75 (236)
T ss_dssp -CCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T---TCSEEEECCTT
T ss_pred CCCeEE-EECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C---CCceEEEcccH
Confidence 367887 45568999999988664444 89999999988765432 1 35 67777764
No 497
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=72.10 E-value=14 Score=34.73 Aligned_cols=57 Identities=18% Similarity=0.197 Sum_probs=37.8
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ .+|+++|++..+...+.+ +++ ..+.++..|..+
T Consensus 7 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~-~~~~~~~~D~~~ 64 (260)
T 1nff_A 7 GKVAL-VSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAA---ELA-DAARYVHLDVTQ 64 (260)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HTG-GGEEEEECCTTC
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---Hhh-cCceEEEecCCC
Confidence 55666 4556788898988766433 489999999887765433 322 236677777643
No 498
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=72.09 E-value=4 Score=40.35 Aligned_cols=50 Identities=26% Similarity=0.237 Sum_probs=35.6
Q ss_pred cCCCCCCeEEEecCCC-ChHHHHHHHhcCCCcEEEEEeCChHHHHHHHHHHHHhCCC
Q 011036 257 LDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (495)
Q Consensus 257 LdpqpGerVLDmCAaP-GgKT~~iA~lm~~~G~ViA~D~s~~kv~~i~~~a~~~gl~ 312 (495)
..+++|++||-.+||+ |--+.++|..++ .+|+++|++..|+.. ++++|.+
T Consensus 160 ~~~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~----~~~lGa~ 210 (339)
T 1rjw_A 160 TGAKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKLEL----AKELGAD 210 (339)
T ss_dssp HTCCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHH----HHHTTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHH----HHHCCCC
Confidence 4789999999998843 333444555443 489999999998764 4567875
No 499
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=72.02 E-value=28 Score=33.22 Aligned_cols=57 Identities=18% Similarity=0.229 Sum_probs=38.8
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChHHHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+.+|++..++..+. ++++- .+.++..|...
T Consensus 27 ~k~vl-VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~-~~~~~~~Dv~d 84 (277)
T 4dqx_A 27 QRVCI-VTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVA---NEIGS-KAFGVRVDVSS 84 (277)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HHHCT-TEEEEECCTTC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHhCC-ceEEEEecCCC
Confidence 55666 4556788999998866433 48999999988766543 34443 46677787644
No 500
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=71.79 E-value=34 Score=32.62 Aligned_cols=60 Identities=20% Similarity=0.207 Sum_probs=40.9
Q ss_pred CCeEEEecCCCChHHHHHHHhcCCC-cEEEEEeCChH-------HHHHHHHHHHHhCCCceEEEEcchhH
Q 011036 262 GERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHN-------KVMDIQKLAAEMGLKCITTYKLDALK 323 (495)
Q Consensus 262 GerVLDmCAaPGgKT~~iA~lm~~~-G~ViA~D~s~~-------kv~~i~~~a~~~gl~~i~~~~~Da~~ 323 (495)
|.+|| +.-|.||...++|..+..+ ..|+.+|++.. ++..+.+..+..|. .+.++..|..+
T Consensus 9 ~k~vl-VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 76 (285)
T 3sc4_A 9 GKTMF-ISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGDIRD 76 (285)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECCTTS
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 55666 4556688888888866444 48999999987 45555555555553 47778888654
Done!