BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>011038
MGAIKLELRCPQKVDGIAIDPEPDWSFDALLSELNSLETRLNASSKPVPFTKTKSREIST
GKSVESNARAFVIRVSDDELENDNERKGEEVHNGSLVAVKRFTCDALYLSESDDSDDDVA
LGGESYLMDEVGLADGALVELTHQHQLGVKEEIRNLISTLETQLISENEQSNSALAQVEK
DRDMRREMDRKNDTVYQRKIAEALDNHLTAVQRDHELKSQIEERKIRSDAAYEEAKRKER
ALQEEKIRQEKVKAEAEMQAKLRAEEAKRAALEAEKRAAKEAAEREAAENSKRITAGVSQ
DGACGRQPDDSSVIAGAQSRGSRSDGTKKLQSAVRATESALNIEQKRLQKLKELDEENQS
LKLSSNEDFSGYEKDISRLIRQIRGLKDNVRTKASELVKILNNPLCPQSISLATFSKKVV
SRCETPDDNVAMSCGYVIVLVASQVPQVMDILLGEFHRACIYTVPKHIVFSEFRLHLNQK
RLTTKLLDTVRKMER

High Scoring Gene Products

Symbol, full name Information P value
GLE1 protein from Arabidopsis thaliana 1.8e-71
AT4G05523 protein from Arabidopsis thaliana 7.4e-13

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  011038
        (495 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2031835 - symbol:GLE1 species:3702 "Arabidopsi...   723  1.8e-71   1
TAIR|locus:504955347 - symbol:AT4G05523 "AT4G05523" speci...   177  7.4e-13   1


>TAIR|locus:2031835 [details] [associations]
            symbol:GLE1 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0005643 "nuclear pore"
            evidence=IEA] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005635 "nuclear envelope" evidence=IDA] [GO:0006312 "mitotic
            recombination" evidence=RCA] [GO:0009560 "embryo sac egg cell
            differentiation" evidence=RCA] [GO:0048316 "seed development"
            evidence=IMP] InterPro:IPR012476 Pfam:PF07817 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005635 GO:GO:0005643 GO:GO:0048316
            GO:GO:0016973 PANTHER:PTHR12960 EMBL:AK228913 IPI:IPI00526811
            RefSeq:NP_172771.1 UniGene:At.27690 ProteinModelPortal:Q0WPZ7
            STRING:Q0WPZ7 PaxDb:Q0WPZ7 PRIDE:Q0WPZ7 EnsemblPlants:AT1G13120.1
            GeneID:837869 KEGG:ath:AT1G13120 TAIR:At1g13120 eggNOG:NOG300781
            InParanoid:Q0WPZ7 OMA:ACDELYL PhylomeDB:Q0WPZ7
            ProtClustDB:CLSN2914234 Genevestigator:Q0WPZ7 Uniprot:Q0WPZ7
        Length = 611

 Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
 Identities = 175/433 (40%), Positives = 248/433 (57%)

Query:     1 MGAIKLELRCPQKVDGIAIDPEPDWSFDALLSELNSLETRLNASSK-PVPFTKTKSREIS 59
             MG + LE  CP+ VDGI+IDPEP+W+F++L++E+ S+E +LN  S  P P T T  R   
Sbjct:     1 MGIV-LEPPCPKSVDGISIDPEPNWNFESLVAEIASVEKKLNGFSMYPQPITNTTLR--- 56

Query:    60 TGKSVESNARAFVIRVSDDELEND-----NERKGEEVHNGSLVAVKRFTCDALYLSEXXX 114
              G+        FV+ VS+DE+E+D     ++ + EE H+    A KRF CD LYLS+   
Sbjct:    57 MGR----RGGGFVMHVSEDEMESDEGEESDDEEEEEDHSQICTAGKRFACDELYLSDESD 112

Query:   115 XXXXVALGGESYLMDEVGLADGALVELTHQHQLGVKEEIRNLISTLETQLISENEQSNSA 174
                        Y+M+++GLA+ AL E+ + HQ  +K++IRN +S +ET++++E E S SA
Sbjct:   113 EEFDHE---PEYMMNKLGLAESALYEVINDHQTEIKDDIRNQVSVVETEIMNEIETSLSA 169

Query:   175 LAQVXXXXXXXXXXXXXXXTVYQRKIAEALDNHLTAVQRDHELKSQIEERKIRSDXXXXX 234
             +A+V                 YQRK+AEALD HLTAVQR+H++KSQIEERKIRS+     
Sbjct:   170 IARVEKYSETRKEVERKLDLQYQRKVAEALDTHLTAVQREHKIKSQIEERKIRSEEAQEE 229

Query:   235 XXXXXXXLQEEKIRQEKVKAEAEMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSKRI 294
                     QEEKIRQEK +AEA+M                               + K  
Sbjct:   230 ARRKERAHQEEKIRQEKARAEAQM----LAKIRAEEEKKEVERKAAREVAEKEVADRKAA 285

Query:   295 TAGVSQDGACGRQPDDSSVIAGAQSRGSRSDGTKKLQSAVRATESALNIEQKRLQKLKEL 354
                +++  A       SS  + AQ+ G+          ++RA ESAL +E  RL+KL+EL
Sbjct:   286 EQKLAEQKAVIESVTGSSATSNAQAGGN----------SIRAAESALILENHRLKKLEEL 335

Query:   355 DEENQSLKLSSNEDFSGYEKDISRLIRQIRGLKDNVRTKASELVKILNNPLCPQSISLAT 414
             +  NQSLK  SNE+FS +EK I R+IRQI G KD+V  K +++VKI  +P CP SIS+A 
Sbjct:   336 ETTNQSLKSRSNENFSSFEKHIGRVIRQISGTKDSVSGKINDIVKIFKDPRCPVSISIAA 395

Query:   415 FSKKVVSRCETPD 427
             F+KK+V+  E P+
Sbjct:   396 FAKKMVTTKEKPN 408

 Score = 422 (153.6 bits), Expect = 1.6e-39, P = 1.6e-39
 Identities = 129/414 (31%), Positives = 195/414 (47%)

Query:    71 FVIRVSDDELENDNERKGEEVHNGSLVAVKRFTCDALYLSEXXXXXXXVALGGESYLMDE 130
             FV+ VS+DE+E+D   +GEE  +                 E       +   G+ +  DE
Sbjct:    64 FVMHVSEDEMESD---EGEESDD----------------EEEEEDHSQICTAGKRFACDE 104

Query:   131 VGLADGALVELTHQ-----HQLGVKEE-IRNLISTLETQLISENEQSNSALAQVXXXXXX 184
             + L+D +  E  H+     ++LG+ E  +  +I+  +T++  +     S +         
Sbjct:   105 LYLSDESDEEFDHEPEYMMNKLGLAESALYEVINDHQTEIKDDIRNQVSVVETEIMNEIE 164

Query:   185 XXXXXXXXXTVY---QRKIAEALD---NHLTAVQRDHELKSQIEERKIRSDXXXXXXXXX 238
                        Y   ++++   LD       A   D  L +   E KI+S          
Sbjct:   165 TSLSAIARVEKYSETRKEVERKLDLQYQRKVAEALDTHLTAVQREHKIKSQIEERKIRSE 224

Query:   239 XXXLQEEKIRQEKVKAEAEMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSKRITAGV 298
                 QEE  R+E+   E +++                               +++  A  
Sbjct:   225 EA--QEEARRKERAHQEEKIRQEKARAEAQMLAKIRAEEEKKEVERKAAREVAEKEVA-- 280

Query:   299 SQDGACGRQPDDSSVIAGAQSRGSRSDGTKKLQSAVRATESALNIEQKRLQKLKELDEEN 358
              +  A  +  +  +VI       + S+      S +RA ESAL +E  RL+KL+EL+  N
Sbjct:   281 DRKAAEQKLAEQKAVIESVTGSSATSNAQAGGNS-IRAAESALILENHRLKKLEELETTN 339

Query:   359 QSLKLSSNEDFSGYEKDISRLIRQIRGLKDNVRTKASELVKILNNPLCPQSISLATFSKK 418
             QSLK  SNE+FS +EK I R+IRQI G KD+V  K +++VKI  +P CP SIS+A F+KK
Sbjct:   340 QSLKSRSNENFSSFEKHIGRVIRQISGTKDSVSGKINDIVKIFKDPRCPVSISIAAFAKK 399

Query:   419 VVSRCETPDDNVAMSCGYVIVLVASQVPQVMDILLGEFHRACIYTVPKHIVFSE 472
             +V+  E P+     +C YVIV + SQ PQVMDILL EFH+ACIYTVPKHIV S+
Sbjct:   400 MVTTKEKPNP---FACSYVIVYINSQFPQVMDILLAEFHKACIYTVPKHIVNSQ 450


>TAIR|locus:504955347 [details] [associations]
            symbol:AT4G05523 "AT4G05523" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR012476 EMBL:CP002687 GO:GO:0005643
            GO:GO:0016973 PANTHER:PTHR12960 IPI:IPI00538758 RefSeq:NP_680605.1
            UniGene:At.54169 PRIDE:F4JGH3 EnsemblPlants:AT4G05523.1
            GeneID:825903 KEGG:ath:AT4G05523 PhylomeDB:F4JGH3 Uniprot:F4JGH3
        Length = 221

 Score = 177 (67.4 bits), Expect = 7.4e-13, P = 7.4e-13
 Identities = 60/171 (35%), Positives = 91/171 (53%)

Query:    10 CPQKVDGIAIDPEPDWSFDALLSELNSLETRLNASSK-PVPFTKTKSREISTGKSVESNA 68
             CP+ V+G + DPEP+ SFD L+SE  S E +LNA +K   PFTKT SR       +    
Sbjct:     9 CPKSVEGFSYDPEPNRSFDRLVSETESFEKKLNAFTKFHQPFTKTTSRT-----DI---- 59

Query:    69 RAFVIRVSDDELENDNERKGEEVHNGSLVAVKRFTCDALYLSEXXXXXXXVALGGESYLM 128
              AFV+RVS+D++++D + +  +  +     +   TCD LYLS+       +    E  +M
Sbjct:    60 -AFVMRVSEDDMDSDEDVENNDQQDKEESQI--CTCDDLYLSDDDEFDHEL----EYTIM 112

Query:   129 DEVG--LADGA-LVELTH--QHQLGVKE-EIRNLIS-TLETQLISENEQSN 172
             +++G  LA+     + T   Q+Q+ V E EIRN I   L    + E  + N
Sbjct:   113 NKMGPALAENDHQTKSTEDIQNQVSVVEKEIRNEIERALSAIALVEKYREN 163

 Score = 164 (62.8 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 48/168 (28%), Positives = 88/168 (52%)

Query:    53 TKSREISTGKSVESNARAFVIRVSDDELENDNERKGEEVHNGSLVAVKRFTCDALYLSEX 112
             TK  +  T K+      AFV+RVS+D++++D + +  +  +     +   TCD LYLS+ 
Sbjct:    44 TKFHQPFT-KTTSRTDIAFVMRVSEDDMDSDEDVENNDQQDKEESQI--CTCDDLYLSDD 100

Query:   113 XXXXXXVALGGESYLMDEVGLADGALVELTHQHQLGVKEEIRNLISTLETQLISENEQSN 172
                   +    E  +M+++G    AL E  + HQ    E+I+N +S +E ++ +E E++ 
Sbjct:   101 DEFDHEL----EYTIMNKMG---PALAE--NDHQTKSTEDIQNQVSVVEKEIRNEIERAL 151

Query:   173 SALAQVXXXXXXXXXXXXXXXTVYQRKIAEALDNHLTAVQRDHELKSQ 220
             SA+A V                 Y+R+++EAL+ H+  V+R+H + S+
Sbjct:   152 SAIALVEKYRENRREVERSLDLQYKREVSEALETHMNVVKREHAIISK 199


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.129   0.346    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      495       431   0.00086  118 3  11 23  0.45    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  219 KB (2122 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  41.01u 0.14s 41.15t   Elapsed:  00:00:02
  Total cpu time:  41.01u 0.14s 41.15t   Elapsed:  00:00:02
  Start:  Tue May 21 11:22:33 2013   End:  Tue May 21 11:22:35 2013

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