Your job contains 1 sequence.
>011039
MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI
EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK
HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN
NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK
LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN
LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW
KTNGIVATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSD
ADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGE
GILSFIPAPEMSLFL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011039
(495 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2010667 - symbol:TAFII59 "TATA BOX ASSOCIATED ... 1547 8.6e-159 1
DICTYBASE|DDB_G0288471 - symbol:taf6 "TATA-binding protei... 474 2.9e-71 3
ZFIN|ZDB-GENE-040912-23 - symbol:taf6 "TAF6 RNA polymeras... 369 1.1e-59 2
UNIPROTKB|Q91857 - symbol:taf6 "Transcription initiation ... 367 1.4e-57 2
CGD|CAL0005584 - symbol:TAF60 species:5476 "Candida albic... 359 8.8e-57 2
UNIPROTKB|Q5A2V7 - symbol:TAF6 "Putative uncharacterized ... 359 8.8e-57 2
ASPGD|ASPL0000017134 - symbol:AN8232 species:162425 "Emer... 580 2.5e-56 1
FB|FBgn0010417 - symbol:Taf6 "TBP-associated factor 6" sp... 379 2.5e-54 2
SGD|S000003080 - symbol:TAF6 "Subunit (60 kDa) of TFIID a... 364 3.7e-54 2
POMBASE|SPCC16C4.18c - symbol:taf6 "histone H4-like TAF T... 451 1.2e-42 1
UNIPROTKB|J9NS44 - symbol:TAF6 "Uncharacterized protein" ... 387 5.1e-38 2
UNIPROTKB|E2RFB9 - symbol:TAF6 "Uncharacterized protein" ... 387 6.5e-38 2
UNIPROTKB|Q58DG7 - symbol:TAF6 "TBP-associated factor 6 i... 387 1.7e-37 2
UNIPROTKB|G8JLM6 - symbol:TAF6 "Transcription initiation ... 378 2.4e-37 2
RGD|1311608 - symbol:Taf6 "TAF6 RNA polymerase II, TATA b... 377 1.4e-36 2
UNIPROTKB|P49848 - symbol:TAF6 "Transcription initiation ... 375 1.8e-36 2
UNIPROTKB|J3KR72 - symbol:TAF6 "Transcription initiation ... 375 3.2e-36 2
MGI|MGI:109129 - symbol:Taf6 "TAF6 RNA polymerase II, TAT... 377 5.9e-36 2
ZFIN|ZDB-GENE-030131-6789 - symbol:taf6l "TAF6-like RNA p... 232 7.7e-25 3
UNIPROTKB|F1MDZ8 - symbol:TAF6L "Uncharacterized protein"... 242 7.4e-24 2
MGI|MGI:2444957 - symbol:Taf6l "TAF6-like RNA polymerase ... 234 1.1e-23 2
UNIPROTKB|I3LPI1 - symbol:TAF6L "Uncharacterized protein"... 233 1.5e-23 2
UNIPROTKB|E2QUN8 - symbol:TAF6L "Uncharacterized protein"... 234 3.9e-23 2
UNIPROTKB|Q9Y6J9 - symbol:TAF6L "TAF6-like RNA polymerase... 224 4.3e-22 2
UNIPROTKB|C9JTY6 - symbol:TAF6 "Transcription initiation ... 254 3.5e-21 1
UNIPROTKB|E5RHA1 - symbol:TAF6 "Transcription initiation ... 254 3.5e-21 1
FB|FBgn0014342 - symbol:mia "meiosis I arrest" species:72... 255 6.7e-19 1
RGD|1310123 - symbol:Taf6l "TAF6-like RNA polymerase II, ... 166 1.6e-15 2
UNIPROTKB|C9JIS2 - symbol:TAF6 "Transcription initiation ... 184 1.6e-13 1
UNIPROTKB|C9JFL8 - symbol:TAF6 "Transcription initiation ... 183 2.0e-13 1
UNIPROTKB|C9J088 - symbol:TAF6 "Transcription initiation ... 178 7.0e-13 1
WB|WBGene00021363 - symbol:taf-6.2 species:6239 "Caenorha... 201 1.5e-12 2
UNIPROTKB|E5RKA5 - symbol:TAF6 "Transcription initiation ... 160 6.3e-11 1
WB|WBGene00006387 - symbol:taf-6.1 species:6239 "Caenorha... 165 4.5e-09 1
UNIPROTKB|C9J7C4 - symbol:TAF6 "Transcription initiation ... 124 4.9e-07 1
UNIPROTKB|F8WEJ7 - symbol:TAF6 "Transcription initiation ... 119 1.7e-06 1
UNIPROTKB|E9PP94 - symbol:TAF6L "TAF6-like RNA polymerase... 103 0.00045 1
>TAIR|locus:2010667 [details] [associations]
symbol:TAFII59 "TATA BOX ASSOCIATED FACTOR II 59"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA;ISS] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0009860
"pollen tube growth" evidence=IMP] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 InterPro:IPR016024
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 EMBL:CP002684 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006352
GO:GO:0009860 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0003743
EMBL:AC004809 GO:GO:0051090 KO:K03131 HSSP:P49847 OMA:LEMIYSL
UniGene:At.46000 EMBL:AY050962 EMBL:AY091292 EMBL:AY463621
IPI:IPI00521178 PIR:A86183 RefSeq:NP_001030969.1 RefSeq:NP_171987.1
RefSeq:NP_849592.1 UniGene:At.47479 ProteinModelPortal:Q9MAU3
SMR:Q9MAU3 IntAct:Q9MAU3 STRING:Q9MAU3 PRIDE:Q9MAU3
EnsemblPlants:AT1G04950.1 EnsemblPlants:AT1G04950.2
EnsemblPlants:AT1G04950.3 GeneID:839370 KEGG:ath:AT1G04950
TAIR:At1g04950 InParanoid:Q9MAU3 PhylomeDB:Q9MAU3
ProtClustDB:CLSN2681958 ArrayExpress:Q9MAU3 Genevestigator:Q9MAU3
Uniprot:Q9MAU3
Length = 549
Score = 1547 (549.6 bits), Expect = 8.6e-159, P = 8.6e-159
Identities = 315/505 (62%), Positives = 381/505 (75%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RTTLT DVD AL LRNVEP+YGFASGGP RFR+AIG+RDLFY DD++V+FKDVI
Sbjct: 48 MRHSKRTTLTASDVDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVI 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
EAPLP+APLDT IVCHWLAIEGVQP IPENAP++ I AP+ +EQKDG ++++LPVK
Sbjct: 108 EAPLPKAPLDTEIVCHWLAIEGVQPAIPENAPLEVIRAPAETKIHEQKDGPLIDVRLPVK 167
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
H+LSRELQLYF KI ELA+S+S+ L+K+ALVSLA+DSGLHPLVPYFT F+ADEVS GLN
Sbjct: 168 HVLSRELQLYFQKIAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGLN 227
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
++ LLF LM +V +LLQNPHI IEPYLHQLMPSVVTCLV+++LGNR ADNHWELRDF A
Sbjct: 228 DFRLLFNLMHIVRSLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFAAN 287
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAXXXXXXXXXXXXX 300
LV+ ICKRYG VY TLQ+RLT+TL+NALLDPK+ALTQHYGA+QGLAA
Sbjct: 288 LVSLICKRYGTVYITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSN 347
Query: 301 XXXXXXXXEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 360
EPE+ EKQKN++K +EAWRVYGALL+AAG CI+ RLKIFPPL S +
Sbjct: 348 LEPYLSLLEPELNAEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPSFLH 407
Query: 361 KTNG---IVATLSNKRKTSMDLEE-QPPLKKIAT-DGPVDAVSTS--SMPTPMEEDATAA 413
K G I++T +KRK S+D E Q P K++ T DGP D V + S PM+ D
Sbjct: 408 KGKGKGKIISTDPHKRKLSVDSSENQSPQKRLITMDGP-DGVHSQDQSGSAPMQVDNPVE 466
Query: 414 TPLDNSDADHPSPSSVQIPPDSG-SESRSKRDK--GDSQAQKLSAILPQVWKDDLNSGKL 470
DN + PSS + D+ SESR+ + K G S+A + AIL Q+WKDDL+SG+L
Sbjct: 467 N--DNPPQNSVQPSSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRL 524
Query: 471 LVSLFELFGEGILSFIPAPEMSLFL 495
LV L EL+G+ IL FIP+ EMS+FL
Sbjct: 525 LVKLHELYGDRILPFIPSTEMSVFL 549
>DICTYBASE|DDB_G0288471 [details] [associations]
symbol:taf6 "TATA-binding protein-associated-factor"
species:44689 "Dictyostelium discoideum" [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0005669 "transcription factor TFIID complex" evidence=ISS]
[GO:0000124 "SAGA complex" evidence=ISS] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571
SMART:SM00803 dictyBase:DDB_G0288471 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016568 GenomeReviews:CM000154_GR
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AAFI02000111 GO:GO:0000124
GO:GO:0006367 GO:GO:0051090 GO:GO:0005669 eggNOG:COG5095 KO:K03131
OMA:EPLYGYD RefSeq:XP_636709.1 ProteinModelPortal:Q54IW7
STRING:Q54IW7 EnsemblProtists:DDB0231094 GeneID:8626641
KEGG:ddi:DDB_G0288471 InParanoid:Q54IW7 ProtClustDB:CLSZ2730274
Uniprot:Q54IW7
Length = 542
Score = 474 (171.9 bits), Expect = 2.9e-71, Sum P(3) = 2.9e-71
Identities = 96/225 (42%), Positives = 143/225 (63%)
Query: 115 IKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADE 174
+K VKH+LS+E+Q++++KIT +V + LF AL SL +DS LH L+PYF F++ +
Sbjct: 243 VKPTVKHVLSKEIQMFYEKITN-SVKSDNQKLFDAALHSLKSDSSLHQLLPYFINFISVQ 301
Query: 175 VSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWEL 234
V++ L N LL LM++ +L++ H++ E YLHQLMPS++TCLV K+L N ++NHWEL
Sbjct: 302 VTQNLTNLELLNRLMKMAQAILESKHLKPELYLHQLMPSILTCLVGKKLCNSPSENHWEL 361
Query: 235 RDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAXXXXXXX 294
RDF A+LV+ +C+++G VY++LQ R+TKTL+ L D + LT HYGA+ GL+
Sbjct: 362 RDFAARLVSFVCRKFGDVYSSLQGRITKTLVQTLHDTTKPLTTHYGAIVGLSGLGRNVIQ 421
Query: 295 XXXXXXXXXXXXXXEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQ 339
EPE L N +K EA RV +++ A G+
Sbjct: 422 FLLLPYVPKYYKLLEPE-LNNNLSNPIKSMEANRVLNSIIDATGK 465
Score = 226 (84.6 bits), Expect = 2.9e-71, Sum P(3) = 2.9e-71
Identities = 43/131 (32%), Positives = 80/131 (61%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGP----LRFRRAIGYRD-LFYLDDKDVE 55
M+HS+R L+TDD++ AL LRN+E +YG++ L+F++ +++L+DK++
Sbjct: 48 MKHSKRDHLSTDDINNALGLRNIEQLYGYSCSANDHSLLKFQKTTTTTQAIYFLNDKEMT 107
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEI 115
F+++ PLP+ P D S+ HWLA+EGVQP+IP+N I + + K +++
Sbjct: 108 FQEIASQPLPKVPRDPSLSAHWLALEGVQPLIPQNPSPYEIEEHHKNLHKKFKSEKALQL 167
Query: 116 KLPVKHILSRE 126
+ + +L+++
Sbjct: 168 EQQAQALLTQQ 178
Score = 52 (23.4 bits), Expect = 2.9e-71, Sum P(3) = 2.9e-71
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 443 RDKGDSQAQKLSA-ILPQVWKDD-LNSGKLLV-SLFELFGEGILSFI 486
+D S+ Q +S I+ + +++ L + K+ SLF+LFGE +L++I
Sbjct: 483 KDDTTSKKQPISLPIITEFSRENILKTLKIQYQSLFDLFGEKLLAYI 529
>ZFIN|ZDB-GENE-040912-23 [details] [associations]
symbol:taf6 "TAF6 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
ZFIN:ZDB-GENE-040912-23 GO:GO:0005634 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 KO:K03131 GeneTree:ENSGT00640000091486 CTD:6878
HOGENOM:HOG000253001 HOVERGEN:HBG012489 EMBL:BX927335
EMBL:CABZ01016379 EMBL:CR847545 EMBL:BC081612 IPI:IPI00491415
RefSeq:NP_001004557.1 UniGene:Dr.36557 STRING:Q66HZ5
Ensembl:ENSDART00000042901 GeneID:447818 KEGG:dre:447818
InParanoid:Q66HZ5 NextBio:20832342 Uniprot:Q66HZ5
Length = 636
Score = 369 (135.0 bits), Expect = 1.1e-59, Sum P(2) = 1.1e-59
Identities = 85/210 (40%), Positives = 126/210 (60%)
Query: 80 IEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAV 139
++ V+P + +QA + + E K + +K H LS E QLY+ +ITE V
Sbjct: 165 LKAVKPGQEDEGFIQAKG--QSAVSAEVKGKEKMRMKPRSTHELSVEQQLYYKEITEACV 222
Query: 140 SRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQ 197
++ +AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+
Sbjct: 223 GSCEAKR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMD 281
Query: 198 NPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTL 256
NP + +E YLH+L+P+VVTC+V+K+L R DNHW LRDF A+L+A CK + N +
Sbjct: 282 NPTLYLEKYLHELIPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNI 341
Query: 257 QTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
Q+R+TKT ALLD K T YG + GLA
Sbjct: 342 QSRITKTFTKALLDEKTQWTTRYGCIAGLA 371
Score = 272 (100.8 bits), Expect = 1.1e-59, Sum P(2) = 1.1e-59
Identities = 51/93 (54%), Positives = 66/93 (70%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H +R LTT D+D ALKL+NVEP+YGF S + FR A G R+L + ++K+V+ D+
Sbjct: 58 MHHGKRCKLTTGDIDHALKLKNVEPLYGFQSEEFIPFRFASGGGRELHFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 92
I PLPR PLD S+ HWL+I+GVQP IPEN P
Sbjct: 118 INTPLPRVPLDVSLKAHWLSIDGVQPAIPENPP 150
>UNIPROTKB|Q91857 [details] [associations]
symbol:taf6 "Transcription initiation factor TFIID subunit
6" species:8355 "Xenopus laevis" [GO:0071339 "MLL1 complex"
evidence=ISS] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0071339
GO:GO:0051090 KO:K03131 CTD:6878 HOVERGEN:HBG012489 EMBL:D50054
EMBL:BC068776 PIR:JC4366 RefSeq:NP_001081232.1 UniGene:Xl.3836
ProteinModelPortal:Q91857 GeneID:397724 KEGG:xla:397724
Xenbase:XB-GENE-5774722 Uniprot:Q91857
Length = 618
Score = 367 (134.2 bits), Expect = 1.4e-57, Sum P(2) = 1.4e-57
Identities = 79/192 (41%), Positives = 121/192 (63%)
Query: 102 GTNNEQK----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATD 157
G E+K +G P+++K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 184 GKGKEKKTAILEGAPLKLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATD 242
Query: 158 SGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVV 215
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E YLH+L+P+V+
Sbjct: 243 PGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVM 302
Query: 216 TCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA 274
TC+V+++L R DNHW LRDF A+L+A ICK + N +Q+R+TKT +D +
Sbjct: 303 TCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKTFTKTWVDDRTP 362
Query: 275 LTQHYGAVQGLA 286
T YG++ GLA
Sbjct: 363 WTTRYGSIAGLA 374
Score = 253 (94.1 bits), Expect = 1.4e-57, Sum P(2) = 1.4e-57
Identities = 49/93 (52%), Positives = 62/93 (66%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LT D+D ALKL+NVEP+YGF L FR A G R+L + ++K+ + D+
Sbjct: 56 MHVGKRQKLTPSDIDAALKLKNVEPIYGFHPKEFLPFRYASGGGRELHFYEEKETDLSDI 115
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 92
I PLPR PLD S+ HWL+IEGVQP IPEN P
Sbjct: 116 ISTPLPRVPLDVSLKAHWLSIEGVQPAIPENPP 148
>CGD|CAL0005584 [details] [associations]
symbol:TAF60 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0000124 "SAGA
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0016573
"histone acetylation" evidence=IEA] [GO:0051123 "RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
InterPro:IPR016024 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
CGD:CAL0005584 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0035690 EMBL:AACQ01000074 GO:GO:0051090 eggNOG:COG5095
KO:K03131 HOGENOM:HOG000159894 RefSeq:XP_716115.1
ProteinModelPortal:Q5A2V7 STRING:Q5A2V7 GeneID:3642252
KEGG:cal:CaO19.7454 Uniprot:Q5A2V7
Length = 519
Score = 359 (131.4 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 79/201 (39%), Positives = 123/201 (61%)
Query: 100 SNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSV--LFKQALVSLATD 157
+N +N++ +EIK +KH+LS+EL+LYFDK+ ++ +S L AL SL +D
Sbjct: 206 NNSNSNKKSTEKDMEIKPLIKHVLSKELKLYFDKVVDVLISTDPEKEHLKNAALTSLKSD 265
Query: 158 SGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTC 217
GLH LVPYF F+A++++ L N +L ++ V+ L+ N I ++PY+H LMP ++T
Sbjct: 266 PGLHQLVPYFIQFIAEQITNQLRNIEILSTMLEVISALVDNKTIFLDPYVHALMPCILTL 325
Query: 218 LVAKRLGN--RLADNH---WE--------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTL 264
L+AKR+G +L + W+ +R+F A L+ I K YG Y+TL+ R+T+TL
Sbjct: 326 LLAKRIGPVIKLTQENKEEWQDALKSQLAIREFAAILLQHIIKVYGSSYSTLRPRITRTL 385
Query: 265 LNALLDPKRALTQHYGAVQGL 285
L ALLD + + YGA+ GL
Sbjct: 386 LRALLDSTKPVGTQYGALLGL 406
Score = 243 (90.6 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 44/104 (42%), Positives = 69/104 (66%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R LTT DV ALK+ N+EP+YG+ + PL ++ + G + L+Y+D+ ++EF+
Sbjct: 56 MRHSKRRQLTTSDVSNALKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHEIEFE 115
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENA-PVQAIAAPS 100
+I LP+ P + HWLAIEGVQP++P+N P + + P+
Sbjct: 116 KLINQQLPKVPRQVNFTAHWLAIEGVQPMVPQNPLPSEIKSLPA 159
Score = 45 (20.9 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 370 SNKRKTSMDLEEQPPLKKI 388
SNK+ T D+E +P +K +
Sbjct: 210 SNKKSTEKDMEIKPLIKHV 228
>UNIPROTKB|Q5A2V7 [details] [associations]
symbol:TAF6 "Putative uncharacterized protein TAF6"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 InterPro:IPR016024
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 CGD:CAL0005584
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0035690
EMBL:AACQ01000074 GO:GO:0051090 eggNOG:COG5095 KO:K03131
HOGENOM:HOG000159894 RefSeq:XP_716115.1 ProteinModelPortal:Q5A2V7
STRING:Q5A2V7 GeneID:3642252 KEGG:cal:CaO19.7454 Uniprot:Q5A2V7
Length = 519
Score = 359 (131.4 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 79/201 (39%), Positives = 123/201 (61%)
Query: 100 SNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSV--LFKQALVSLATD 157
+N +N++ +EIK +KH+LS+EL+LYFDK+ ++ +S L AL SL +D
Sbjct: 206 NNSNSNKKSTEKDMEIKPLIKHVLSKELKLYFDKVVDVLISTDPEKEHLKNAALTSLKSD 265
Query: 158 SGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTC 217
GLH LVPYF F+A++++ L N +L ++ V+ L+ N I ++PY+H LMP ++T
Sbjct: 266 PGLHQLVPYFIQFIAEQITNQLRNIEILSTMLEVISALVDNKTIFLDPYVHALMPCILTL 325
Query: 218 LVAKRLGN--RLADNH---WE--------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTL 264
L+AKR+G +L + W+ +R+F A L+ I K YG Y+TL+ R+T+TL
Sbjct: 326 LLAKRIGPVIKLTQENKEEWQDALKSQLAIREFAAILLQHIIKVYGSSYSTLRPRITRTL 385
Query: 265 LNALLDPKRALTQHYGAVQGL 285
L ALLD + + YGA+ GL
Sbjct: 386 LRALLDSTKPVGTQYGALLGL 406
Score = 243 (90.6 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 44/104 (42%), Positives = 69/104 (66%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R LTT DV ALK+ N+EP+YG+ + PL ++ + G + L+Y+D+ ++EF+
Sbjct: 56 MRHSKRRQLTTSDVSNALKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHEIEFE 115
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENA-PVQAIAAPS 100
+I LP+ P + HWLAIEGVQP++P+N P + + P+
Sbjct: 116 KLINQQLPKVPRQVNFTAHWLAIEGVQPMVPQNPLPSEIKSLPA 159
Score = 45 (20.9 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 370 SNKRKTSMDLEEQPPLKKI 388
SNK+ T D+E +P +K +
Sbjct: 210 SNKKSTEKDMEIKPLIKHV 228
>ASPGD|ASPL0000017134 [details] [associations]
symbol:AN8232 species:162425 "Emericella nidulans"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 EMBL:BN001302 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0003743 GO:GO:0051090 EMBL:AACD01000144
eggNOG:COG5095 KO:K03131 HOGENOM:HOG000159894 OMA:EPLYGYD
OrthoDB:EOG45XC4M RefSeq:XP_681501.1 ProteinModelPortal:Q5ATZ8
STRING:Q5ATZ8 EnsemblFungi:CADANIAT00004284 GeneID:2869223
KEGG:ani:AN8232.2 Uniprot:Q5ATZ8
Length = 445
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 124/299 (41%), Positives = 182/299 (60%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IGY-RDLFYLDDKDVEFKD 58
MRHSRRT LTT D+ AL++ +VEP+YG+ + PL+F A +G + LFY++D++V+F+
Sbjct: 48 MRHSRRTLLTTQDIALALRVLDVEPLYGYETTRPLKFGEASLGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP-- 112
+I APLPR P + S HWLA+EGVQP IP+N A + + S G N N +
Sbjct: 108 LINAPLPRVPREISFTAHWLAVEGVQPSIPQNPTAADSRNLELMSKGPNANATLAAMSGN 167
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKH+LS+ELQLYF+K+ + S SL D GLH LVPYF F
Sbjct: 168 GNVAVKPLVKHVLSKELQLYFEKVCNAFLDESSEKYRTSGYASLREDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD- 229
++++V+ GL + +L +M + L+QN + ++PY+ L+P ++TCL+ ++LG AD
Sbjct: 228 ISEKVTHGLKDIFVLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGT-ADL 286
Query: 230 -NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 287
+ LRD A L+ I +Y H +TL+ RL ++ L LLDP + HYGA+ GL A
Sbjct: 287 SEQFALRDLAAALLGLIATKYSHSSHTLKPRLARSCLKTLLDPSKPFGAHYGAIIGLHA 345
>FB|FBgn0010417 [details] [associations]
symbol:Taf6 "TBP-associated factor 6" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000124 "SAGA complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
EMBL:AE014296 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0022008
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 GO:GO:0005669
GO:GO:0051123 eggNOG:COG5095 KO:K03131 GeneTree:ENSGT00640000091486
EMBL:AY051702 EMBL:U06459 EMBL:L25443 RefSeq:NP_524161.2
UniGene:Dm.2802 PDB:1TAF PDBsum:1TAF ProteinModelPortal:P49847
SMR:P49847 DIP:DIP-772N DIP:DIP-778N IntAct:P49847 MINT:MINT-755268
STRING:P49847 PaxDb:P49847 EnsemblMetazoa:FBtr0074941 GeneID:40134
KEGG:dme:Dmel_CG32211 CTD:6878 FlyBase:FBgn0010417
InParanoid:P49847 OMA:KQLATHE OrthoDB:EOG434TN9 PhylomeDB:P49847
EvolutionaryTrace:P49847 GenomeRNAi:40134 NextBio:817166
Bgee:P49847 GermOnline:CG32211 Uniprot:P49847
Length = 606
Score = 379 (138.5 bits), Expect = 2.5e-54, Sum P(2) = 2.5e-54
Identities = 88/212 (41%), Positives = 129/212 (60%)
Query: 80 IEGVQPVIPENAPVQAIAA--PSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITEL 137
++ V PVI + + AA P+ G ++ K+ + +K H LS E QLY+ +ITE
Sbjct: 166 LDSVNPVIKMDQGLNKDAAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEA 225
Query: 138 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNL 195
V SD +AL SL +D GLH ++P F+A+ V + NN +LL LMR+V L
Sbjct: 226 CVG-SDEPRRGEALQSLGSDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRAL 284
Query: 196 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA-DNHWELRDFTAKLVAAICKRYGHVYN 254
L NP + +E YLH+L+PSV+TC+V+K+L R DNHW LRDF ++L+A ICK + + N
Sbjct: 285 LDNPSLFLEKYLHELIPSVMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTN 344
Query: 255 TLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
LQTR+T+ AL + K L+ YG++ GL+
Sbjct: 345 NLQTRVTRIFSKALQNDKTHLSSLYGSIAGLS 376
Score = 208 (78.3 bits), Expect = 2.5e-54, Sum P(2) = 2.5e-54
Identities = 38/93 (40%), Positives = 59/93 (63%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H++R L+ D+D +LK+RNVEP YGF + + FR A G R+L + +DK+++ ++
Sbjct: 65 MNHAKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEI 124
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 92
+ PLD ++ HW +EGVQP +PEN P
Sbjct: 125 TSTNSVKIPLDLTLRSHWFVVEGVQPTVPENPP 157
>SGD|S000003080 [details] [associations]
symbol:TAF6 "Subunit (60 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0046695
"SLIK (SAGA-like) complex" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0001075 "RNA polymerase II core
promoter sequence-specific DNA binding transcription factor
activity involved in preinitiation complex assembly" evidence=IC]
[GO:0000124 "SAGA complex" evidence=IDA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0016568
"chromatin modification" evidence=IDA] [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IDA;IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0032947 "protein complex scaffold" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
SGD:S000003080 EMBL:BK006941 GO:GO:0016573 GO:GO:0003682
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0046695
GO:GO:0032947 GO:GO:0051090 GO:GO:0001102 EMBL:X97644 GO:GO:0005669
GO:GO:0051123 EMBL:Z72634 eggNOG:COG5095 KO:K03131
GeneTree:ENSGT00640000091486 HOGENOM:HOG000159894 OrthoDB:EOG45XC4M
EMBL:L40145 EMBL:AY723809 PIR:S64120 RefSeq:NP_011403.1
ProteinModelPortal:P53040 SMR:P53040 DIP:DIP-981N IntAct:P53040
MINT:MINT-405577 STRING:P53040 PaxDb:P53040 PeptideAtlas:P53040
EnsemblFungi:YGL112C GeneID:852766 KEGG:sce:YGL112C CYGD:YGL112c
OMA:LEMIYSL NextBio:972224 Genevestigator:P53040 GermOnline:YGL112C
Uniprot:P53040
Length = 516
Score = 364 (133.2 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 79/195 (40%), Positives = 123/195 (63%)
Query: 108 KDGLPVEIKLPVKHILSRELQLYFDKI--TELAVSRSDSVL--FKQA-LVSLATDSGLHP 162
K G E+K VKH+LS+ELQ+YF+K+ T A S++D KQA L SL TDSGLH
Sbjct: 204 KPGQNTEVKPLVKHVLSKELQIYFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQ 263
Query: 163 LVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKR 222
LVPYF F+A+++++ L++ LL ++ ++++LL N I ++PY+H LMPS++T L+AK+
Sbjct: 264 LVPYFIQFIAEQITQNLSDLQLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKK 323
Query: 223 LGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP 271
LG D+ + LRDF A L+ + K++ Y +L+ R+T+TLL LD
Sbjct: 324 LGGSPKDDSPQEIHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDI 383
Query: 272 KRALTQHYGAVQGLA 286
R +YG ++G++
Sbjct: 384 NRVFGTYYGCLKGVS 398
Score = 213 (80.0 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 42/95 (44%), Positives = 62/95 (65%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLR----FRRA--IGYRDLFYLDDKDVE 55
RHS+R LTTDDV +AL++ NVEP+YG+ G + F + G + ++YLD+++V+
Sbjct: 57 RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVD 116
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN 90
F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 117 FDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQN 151
>POMBASE|SPCC16C4.18c [details] [associations]
symbol:taf6 "histone H4-like TAF Taf6, SAGA complex
subunit" species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA
complex" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005669 "transcription factor TFIID complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IC] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISO]
[GO:0016573 "histone acetylation" evidence=IC] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 InterPro:IPR016024 Pfam:PF02969 Pfam:PF07571
SMART:SM00803 PomBase:SPCC16C4.18c GO:GO:0005829 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0016573 GO:GO:0006338 GO:GO:0000790
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0006367
GO:GO:0051090 GO:GO:0005669 eggNOG:COG5095 KO:K03131 PIR:T41108
RefSeq:NP_587928.1 HSSP:P49847 ProteinModelPortal:O74462
STRING:O74462 EnsemblFungi:SPCC16C4.18c.1 GeneID:2539133
KEGG:spo:SPCC16C4.18c HOGENOM:HOG000159894 OMA:EPLYGYD
OrthoDB:EOG45XC4M NextBio:20800305 Uniprot:O74462
Length = 452
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 99/228 (43%), Positives = 142/228 (62%)
Query: 60 IEAPLPRAPLDTS-IVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLP 118
++ +P+ P + V W A +G V+P A A A NG + VEIK
Sbjct: 135 VQPAIPQNPTPSDHTVGEW-ASKGTSGVMP-GASTAAKEA-RNGVTSMDN----VEIKPL 187
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
V+H+LS+ELQLYF++IT + ++ L AL SL D GLH L+PYF F++D V+R
Sbjct: 188 VRHVLSKELQLYFERITSALLDETNVELRDAALSSLRDDPGLHQLLPYFIMFLSDSVTRN 247
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN-HWELRDF 237
L N +L LM + W LL NP++ +EPY+ QLMPS++TCLVAKRLG+ ++ H+ LRD
Sbjct: 248 LGNLVVLTTLMHMAWALLDNPNLFVEPYVQQLMPSILTCLVAKRLGSDPNNHEHYALRDL 307
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGL 285
A L+ +C R+G+VY TL+ R+T+T L A LD + + HYGA++GL
Sbjct: 308 AAFLLGIVCDRFGNVYYTLKPRVTRTALKAFLDNTKPYSTHYGAIKGL 355
Score = 260 (96.6 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 49/93 (52%), Positives = 64/93 (68%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
M HS+RT LT+ D+ AL+ NVEP+YGF + PL F A G L+YLDD++V+F+
Sbjct: 50 MVHSKRTVLTSADISSALRTLNVEPLYGFNNSRPLEFHEAAVGAGQNSLYYLDDEEVDFE 109
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN 90
+I APLP+ P + S HWLAIEGVQP IP+N
Sbjct: 110 KIINAPLPKVPRNISYSAHWLAIEGVQPAIPQN 142
>UNIPROTKB|J9NS44 [details] [associations]
symbol:TAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0005634 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006352
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 KO:K03131
GeneTree:ENSGT00640000091486 CTD:6878 EMBL:AAEX03004275
RefSeq:XP_546964.2 Ensembl:ENSCAFT00000049298 GeneID:489846
KEGG:cfa:489846 Uniprot:J9NS44
Length = 678
Score = 387 (141.3 bits), Expect = 5.1e-38, Sum P(2) = 5.1e-38
Identities = 91/237 (38%), Positives = 141/237 (59%)
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIA---APSNGTNNEQK-----DGLP 112
E P P AP + ++ +P E+ P++ A AP++G E+K +G P
Sbjct: 147 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKAQGAAPADGKGKEKKAPPLLEGAP 205
Query: 113 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 172
+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+ F++
Sbjct: 206 LRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFIS 264
Query: 173 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-AD 229
+ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R D
Sbjct: 265 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 324
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
NHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 325 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 381
Score = 254 (94.5 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 48/93 (51%), Positives = 64/93 (68%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 92
I PLPR PLD + HWL+IEG QP IPEN P
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPP 150
Score = 49 (22.3 bits), Expect = 5.1e-38, Sum P(2) = 5.1e-38
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 390 TDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQI----PPDSGS 437
T P A SS P+P+ A + D+ P+P + + PP S S
Sbjct: 622 TSHPSPAPPPSSAPSPLGGSALCGGKQEAGDSPPPAPGTPKANGSQPPGSSS 673
Score = 44 (20.5 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 18/66 (27%), Positives = 25/66 (37%)
Query: 383 PPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSESRSK 442
PP + G V S+P P E T + + P PSS P + K
Sbjct: 592 PPSTAPSGPGSVQKYIVVSLP-PTGEGKGGPT---SHPSPAPPPSSAPSPLGGSALCGGK 647
Query: 443 RDKGDS 448
++ GDS
Sbjct: 648 QEAGDS 653
Score = 39 (18.8 bits), Expect = 5.7e-37, Sum P(2) = 5.7e-37
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 366 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 425
V TL + R + PP K I +S+SS + ++ + +T S + S
Sbjct: 517 VQTLVSARAAAPPQPSPPPTKFIV-------MSSSSSASSTQQVLSLSTSAPGSGSTTTS 569
Query: 426 PSSVQIP 432
P + +P
Sbjct: 570 PVTTTVP 576
>UNIPROTKB|E2RFB9 [details] [associations]
symbol:TAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0045786 "negative regulation of cell cycle" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0051090 "regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0005737 GO:GO:0008285
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367 GO:GO:0071339
GO:GO:0045786 GO:GO:0051090 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00640000091486 OMA:QEETCQL EMBL:AAEX03004275
Ensembl:ENSCAFT00000023284 NextBio:20862962 Uniprot:E2RFB9
Length = 698
Score = 387 (141.3 bits), Expect = 6.5e-38, Sum P(2) = 6.5e-38
Identities = 91/237 (38%), Positives = 141/237 (59%)
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIA---APSNGTNNEQK-----DGLP 112
E P P AP + ++ +P E+ P++ A AP++G E+K +G P
Sbjct: 167 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKAQGAAPADGKGKEKKAPPLLEGAP 225
Query: 113 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 172
+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+ F++
Sbjct: 226 LRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFIS 284
Query: 173 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-AD 229
+ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R D
Sbjct: 285 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 344
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
NHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 345 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 401
Score = 254 (94.5 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 48/93 (51%), Positives = 64/93 (68%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 78 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 137
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 92
I PLPR PLD + HWL+IEG QP IPEN P
Sbjct: 138 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPP 170
Score = 49 (22.3 bits), Expect = 6.5e-38, Sum P(2) = 6.5e-38
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 390 TDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQI----PPDSGS 437
T P A SS P+P+ A + D+ P+P + + PP S S
Sbjct: 642 TSHPSPAPPPSSAPSPLGGSALCGGKQEAGDSPPPAPGTPKANGSQPPGSSS 693
Score = 44 (20.5 bits), Expect = 2.2e-37, Sum P(2) = 2.2e-37
Identities = 18/66 (27%), Positives = 25/66 (37%)
Query: 383 PPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSESRSK 442
PP + G V S+P P E T + + P PSS P + K
Sbjct: 612 PPSTAPSGPGSVQKYIVVSLP-PTGEGKGGPT---SHPSPAPPPSSAPSPLGGSALCGGK 667
Query: 443 RDKGDS 448
++ GDS
Sbjct: 668 QEAGDS 673
Score = 39 (18.8 bits), Expect = 7.3e-37, Sum P(2) = 7.3e-37
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 366 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 425
V TL + R + PP K I +S+SS + ++ + +T S + S
Sbjct: 537 VQTLVSARAAAPPQPSPPPTKFIV-------MSSSSSASSTQQVLSLSTSAPGSGSTTTS 589
Query: 426 PSSVQIP 432
P + +P
Sbjct: 590 PVTTTVP 596
>UNIPROTKB|Q58DG7 [details] [associations]
symbol:TAF6 "TBP-associated factor 6 isoform alpha"
species:9913 "Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0045786 "negative regulation of cell cycle" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0051090 "regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0005737 GO:GO:0008285
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0003700
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367 GO:GO:0071339
GO:GO:0045786 GO:GO:0051090 GO:GO:0005669 GO:GO:0033276 KO:K03131
GeneTree:ENSGT00640000091486 CTD:6878 HOGENOM:HOG000253001
HOVERGEN:HBG012489 OMA:QEETCQL EMBL:DAAA02058286 EMBL:BT021630
IPI:IPI00717822 RefSeq:NP_001015525.1 UniGene:Bt.13917
STRING:Q58DG7 Ensembl:ENSBTAT00000054282 GeneID:505638
KEGG:bta:505638 InParanoid:Q58DG7 NextBio:20867237 Uniprot:Q58DG7
Length = 678
Score = 387 (141.3 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 91/237 (38%), Positives = 141/237 (59%)
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK-----DGLP 112
E P P AP + ++ +P E+ P++ AAP++G E+K +G P
Sbjct: 147 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAPADGKGKEKKAPPLLEGAP 205
Query: 113 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 172
+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+ F++
Sbjct: 206 LRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFIS 264
Query: 173 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-AD 229
+ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R D
Sbjct: 265 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 324
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
NHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 325 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 381
Score = 254 (94.5 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 48/93 (51%), Positives = 64/93 (68%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 92
I PLPR PLD + HWL+IEG QP IPEN P
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPP 150
Score = 44 (20.5 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 400 SSMPTPMEEDATAATPLDNSDADHPSPSSVQIPP 433
+S P+P+ +A +PL S P + + PP
Sbjct: 622 ASHPSPVPTPTSAPSPLGGSALCGGKPEAGESPP 655
Score = 39 (18.8 bits), Expect = 5.7e-37, Sum P(2) = 5.7e-37
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 366 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 425
V TL + R + PP K I +S+SS + ++ + +T S + S
Sbjct: 517 VQTLVSTRAAAPPQPSPPPTKFIV-------MSSSSSASSTQQVLSLSTSAPGSGSTTTS 569
Query: 426 PSSVQIP 432
P + +P
Sbjct: 570 PVTTTVP 576
>UNIPROTKB|G8JLM6 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR011442 Pfam:PF07571
GO:GO:0005634 GO:GO:0005737 GO:GO:0051090 EMBL:AC073842
HGNC:HGNC:11540 ProteinModelPortal:G8JLM6 SMR:G8JLM6
Ensembl:ENST00000418432 Bgee:G8JLM6 Uniprot:G8JLM6
Length = 601
Score = 378 (138.1 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 96/274 (35%), Positives = 154/274 (56%)
Query: 27 YGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLP---RAPLDTSIVCHWLAIEGV 83
+ FASGG R + + + +D D+ + PL +AP + ++
Sbjct: 37 FRFASGGG----RELYFYEEKEVDLSDIINTPLPRVPLDVCLKAPKEQQKAEATEPLKSA 92
Query: 84 QPVIPENAPVQAI---AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKIT 135
+P E+ P++ A ++G E+K +G P+ +K H LS E QLY+ +IT
Sbjct: 93 KPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEIT 152
Query: 136 ELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVW 193
E V ++ +AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V
Sbjct: 153 EACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVK 211
Query: 194 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHV 252
L+ NP + +E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK +
Sbjct: 212 ALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTT 271
Query: 253 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 272 TNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 305
Score = 211 (79.3 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 65/191 (34%), Positives = 100/191 (52%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 60 IEAPLPRAPLDTSIVC--HWLAIEGVQPVI---P---ENAPVQAI---AAPSNGTNNEQK 108
I PLPR PLD + E +P+ P E+ P++ A ++G E+K
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKK 120
Query: 109 DGLPVE-IKLPVKHILSREL---QLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLV 164
+E L +K EL Q + K A S +AL S+ATD GL+ ++
Sbjct: 121 APPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGLYQML 180
Query: 165 PYFTYFVADEV 175
P F+ F+++ V
Sbjct: 181 PRFSTFISEGV 191
Score = 47 (21.6 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 390 TDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSESRS 441
T P +S P+P+ A + D+ P+P + P +GS+ S
Sbjct: 546 TSHPSPVPPPASSPSPLSGSALCGGKQEAGDSPPPAPGT---PKANGSQPNS 594
Score = 42 (19.8 bits), Expect = 8.1e-37, Sum P(2) = 8.1e-37
Identities = 12/58 (20%), Positives = 23/58 (39%)
Query: 382 QPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSES 439
QP +K ++T + S P +++ + P P+ +PP + S S
Sbjct: 503 QPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPS 560
Score = 39 (18.8 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 366 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 425
V TL + R + PP K I S+SS P+ ++ + +T S + S
Sbjct: 441 VQTLVSARAAAPPQPSPPPTKFIVMS------SSSSAPST-QQVLSLSTSAPGSGSTTTS 493
Query: 426 PSSVQIP 432
P + +P
Sbjct: 494 PVTTTVP 500
>RGD|1311608 [details] [associations]
symbol:Taf6 "TAF6 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008285 "negative regulation
of cell proliferation" evidence=IEA;ISO] [GO:0033276 "transcription
factor TFTC complex" evidence=IEA;ISO] [GO:0045786 "negative
regulation of cell cycle" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 RGD:1311608 GO:GO:0005737
GO:GO:0008285 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677
GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367
GO:GO:0071339 GO:GO:0045786 GO:GO:0051090 GO:GO:0005669
GO:GO:0033276 eggNOG:COG5095 GeneTree:ENSGT00640000091486
HOGENOM:HOG000253001 HOVERGEN:HBG012489 OrthoDB:EOG4MKNG0
OMA:QEETCQL EMBL:D49446 IPI:IPI00212680 UniGene:Rn.102447
ProteinModelPortal:Q63801 STRING:Q63801 PhosphoSite:Q63801
PRIDE:Q63801 Ensembl:ENSRNOT00000001829 UCSC:RGD:1311608
InParanoid:Q63801 Genevestigator:Q63801
GermOnline:ENSRNOG00000001355 Uniprot:Q63801
Length = 678
Score = 377 (137.8 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 90/237 (37%), Positives = 139/237 (58%)
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK-----DGLP 112
E P P AP + ++ +P E+ P++ AA ++G E+K +G P
Sbjct: 147 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADGKGKEKKAPPLLEGAP 205
Query: 113 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 172
+K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+ F++
Sbjct: 206 FRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFIS 264
Query: 173 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-AD 229
+ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R D
Sbjct: 265 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 324
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
NHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 325 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 381
Score = 254 (94.5 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 48/93 (51%), Positives = 64/93 (68%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 92
I PLPR PLD + HWL+IEG QP IPEN P
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPP 150
Score = 46 (21.3 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 393 PVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSE 438
P +SS P+P+ A + D+ P+P + P +GS+
Sbjct: 625 PSPVPPSSSSPSPLGGSALCGGKQETGDSPPPAPGT---PKANGSQ 667
Score = 41 (19.5 bits), Expect = 4.6e-36, Sum P(2) = 4.6e-36
Identities = 12/58 (20%), Positives = 22/58 (37%)
Query: 382 QPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSES 439
QP +K ++T + + P +++ + P P +PP S S S
Sbjct: 579 QPIVKLVSTATTAPPSTAPAGPGSVQKYIVVSLPPTGEGKGGPPSHPSPVPPSSSSPS 636
Score = 39 (18.8 bits), Expect = 7.5e-36, Sum P(2) = 7.5e-36
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 366 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 425
V TL + R + PP K I +S+SS + ++ + +T S + S
Sbjct: 517 VQTLVSARAAAPPQPSPPPTKFIV-------MSSSSSASSTQQVLSLSTSAPGSGSTTTS 569
Query: 426 PSSVQIP 432
P + +P
Sbjct: 570 PVTTTVP 576
>UNIPROTKB|P49848 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0045786 "negative regulation of cell cycle"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=NAS;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IDA;TAS] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] Reactome:REACT_71
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0005737
Reactome:REACT_116125 GO:GO:0008285 GO:GO:0016032 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:CH236956 EMBL:CH471091 GO:GO:0006368
GO:GO:0006367 GO:GO:0071339 GO:GO:0045786 GO:GO:0051090
Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276 eggNOG:COG5095
KO:K03131 CTD:6878 EMBL:L25444 EMBL:U31659 EMBL:AK300005
EMBL:CR627390 EMBL:AY149894 EMBL:BC018115 IPI:IPI00028579
IPI:IPI00376952 IPI:IPI00924712 RefSeq:NP_001177344.1
RefSeq:NP_005632.1 RefSeq:NP_647476.1 UniGene:Hs.489309
ProteinModelPortal:P49848 SMR:P49848 DIP:DIP-29288N DIP:DIP-773N
IntAct:P49848 MINT:MINT-1211769 STRING:P49848 PhosphoSite:P49848
DMDM:1729810 PaxDb:P49848 PRIDE:P49848 DNASU:6878
Ensembl:ENST00000344095 Ensembl:ENST00000437822
Ensembl:ENST00000452041 Ensembl:ENST00000453269 GeneID:6878
KEGG:hsa:6878 UCSC:uc003uti.3 GeneCards:GC07M099704 HGNC:HGNC:11540
HPA:HPA006566 MIM:602955 neXtProt:NX_P49848 PharmGKB:PA36315
HOGENOM:HOG000253001 HOVERGEN:HBG012489 InParanoid:P49848
OrthoDB:EOG4MKNG0 PhylomeDB:P49848 GenomeRNAi:6878 NextBio:26859
ArrayExpress:P49848 Bgee:P49848 CleanEx:HS_TAF6
Genevestigator:P49848 GermOnline:ENSG00000106290 Uniprot:P49848
Length = 677
Score = 375 (137.1 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 89/237 (37%), Positives = 139/237 (58%)
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK-----DGLP 112
E P P AP + ++ +P E+ P++ A ++G E+K +G P
Sbjct: 147 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAP 205
Query: 113 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 172
+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+ F++
Sbjct: 206 LRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFIS 264
Query: 173 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-AD 229
+ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R D
Sbjct: 265 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 324
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
NHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 325 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 381
Score = 254 (94.5 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 48/93 (51%), Positives = 64/93 (68%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 92
I PLPR PLD + HWL+IEG QP IPEN P
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPP 150
Score = 47 (21.6 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 390 TDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSESRS 441
T P +S P+P+ A + D+ P+P + P +GS+ S
Sbjct: 622 TSHPSPVPPPASSPSPLSGSALCGGKQEAGDSPPPAPGT---PKANGSQPNS 670
Score = 42 (19.8 bits), Expect = 6.0e-36, Sum P(2) = 6.0e-36
Identities = 12/58 (20%), Positives = 23/58 (39%)
Query: 382 QPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSES 439
QP +K ++T + S P +++ + P P+ +PP + S S
Sbjct: 579 QPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPS 636
Score = 39 (18.8 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 366 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 425
V TL + R + PP K I S+SS P+ ++ + +T S + S
Sbjct: 517 VQTLVSARAAAPPQPSPPPTKFIVMS------SSSSAPST-QQVLSLSTSAPGSGSTTTS 569
Query: 426 PSSVQIP 432
P + +P
Sbjct: 570 PVTTTVP 576
>UNIPROTKB|J3KR72 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0051090 "regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR004823
InterPro:IPR009072 InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571
SMART:SM00803 GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0051090 EMBL:AC073842 HGNC:HGNC:11540
OMA:QEETCQL ProteinModelPortal:J3KR72 Ensembl:ENST00000472509
Uniprot:J3KR72
Length = 734
Score = 375 (137.1 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 89/237 (37%), Positives = 139/237 (58%)
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK-----DGLP 112
E P P AP + ++ +P E+ P++ A ++G E+K +G P
Sbjct: 204 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAP 262
Query: 113 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 172
+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+ F++
Sbjct: 263 LRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFIS 321
Query: 173 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-AD 229
+ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R D
Sbjct: 322 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 381
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
NHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 382 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 438
Score = 254 (94.5 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 48/93 (51%), Positives = 64/93 (68%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 115 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 174
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 92
I PLPR PLD + HWL+IEG QP IPEN P
Sbjct: 175 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPP 207
Score = 47 (21.6 bits), Expect = 3.2e-36, Sum P(2) = 3.2e-36
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 390 TDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSESRS 441
T P +S P+P+ A + D+ P+P + P +GS+ S
Sbjct: 679 TSHPSPVPPPASSPSPLSGSALCGGKQEAGDSPPPAPGT---PKANGSQPNS 727
Score = 42 (19.8 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 12/58 (20%), Positives = 23/58 (39%)
Query: 382 QPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSES 439
QP +K ++T + S P +++ + P P+ +PP + S S
Sbjct: 636 QPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPS 693
Score = 39 (18.8 bits), Expect = 2.2e-35, Sum P(2) = 2.2e-35
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 366 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 425
V TL + R + PP K I S+SS P+ ++ + +T S + S
Sbjct: 574 VQTLVSARAAAPPQPSPPPTKFIVMS------SSSSAPST-QQVLSLSTSAPGSGSTTTS 626
Query: 426 PSSVQIP 432
P + +P
Sbjct: 627 PVTTTVP 633
>MGI|MGI:109129 [details] [associations]
symbol:Taf6 "TAF6 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10090 "Mus musculus" [GO:0003677
"DNA binding" evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005669 "transcription factor TFIID complex" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 MGI:MGI:109129
GO:GO:0005737 GO:GO:0008285 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0006367 GO:GO:0071339 GO:GO:0045786 GO:GO:0051090
GO:GO:0005669 GO:GO:0033276 eggNOG:COG5095 KO:K03131
GeneTree:ENSGT00640000091486 CTD:6878 HOGENOM:HOG000253001
HOVERGEN:HBG012489 OrthoDB:EOG4MKNG0 EMBL:D49439 EMBL:BC058583
IPI:IPI00124566 PIR:JC4245 RefSeq:NP_033341.1 UniGene:Mm.248517
ProteinModelPortal:Q62311 SMR:Q62311 DIP:DIP-493N IntAct:Q62311
MINT:MINT-269059 STRING:Q62311 PhosphoSite:Q62311 PaxDb:Q62311
PRIDE:Q62311 Ensembl:ENSMUST00000048698 Ensembl:ENSMUST00000110936
GeneID:21343 KEGG:mmu:21343 UCSC:uc009aew.1 InParanoid:Q62311
OMA:QEETCQL NextBio:300524 Bgee:Q62311 Genevestigator:Q62311
GermOnline:ENSMUSG00000036980 Uniprot:Q62311
Length = 678
Score = 377 (137.8 bits), Expect = 5.9e-36, Sum P(2) = 5.9e-36
Identities = 90/237 (37%), Positives = 139/237 (58%)
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK-----DGLP 112
E P P AP + ++ +P E+ P++ AA ++G E+K +G P
Sbjct: 147 ENP-PPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADGKGKEKKAPPLLEGAP 205
Query: 113 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 172
+K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+ F++
Sbjct: 206 FRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQMLPRFSTFIS 264
Query: 173 DEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-AD 229
+ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R D
Sbjct: 265 EGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVD 324
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
NHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA
Sbjct: 325 NHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLA 381
Score = 254 (94.5 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 48/93 (51%), Positives = 64/93 (68%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 92
I PLPR PLD + HWL+IEG QP IPEN P
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPP 150
Score = 40 (19.1 bits), Expect = 5.9e-36, Sum P(2) = 5.9e-36
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 393 PVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSE 438
P +SS P+P+ + D+ P+P + P +GS+
Sbjct: 625 PSPVPPSSSSPSPLGGSTLCGGKQEAGDSPPPAPGT---PKANGSQ 667
Score = 39 (18.8 bits), Expect = 7.5e-36, Sum P(2) = 7.5e-36
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 366 VATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPS 425
V TL + R + PP K I +S+SS + ++ + +T S + S
Sbjct: 517 VQTLVSARAAAPPQPSPPPTKFIV-------MSSSSSASSTQQVLSLSTSAPGSGSTTTS 569
Query: 426 PSSVQIP 432
P + +P
Sbjct: 570 PVTTTVP 576
>ZFIN|ZDB-GENE-030131-6789 [details] [associations]
symbol:taf6l "TAF6-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
ZFIN:ZDB-GENE-030131-6789 GO:GO:0005634 GO:GO:0006352
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 CTD:10629 KO:K03131
OMA:MPQLTAN GeneTree:ENSGT00640000091486 EMBL:AL954709
IPI:IPI00901427 RefSeq:NP_001186651.1 UniGene:Dr.75265
Ensembl:ENSDART00000113120 GeneID:557363 KEGG:dre:557363
NextBio:20881960 Bgee:E7FEV1 Uniprot:E7FEV1
Length = 641
Score = 232 (86.7 bits), Expect = 7.7e-25, Sum P(3) = 7.7e-25
Identities = 81/296 (27%), Positives = 131/296 (44%)
Query: 123 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 182
LS +L Y+ +IT A+ D L K AL+ L ++S + L+PYF Y ++ V ++
Sbjct: 153 LSEDLLKYYQQITR-AILGEDPHLMKVALLDLQSNSKIAALLPYFVYVISG-VKSVSHDL 210
Query: 183 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAK 240
L L+ +V +L+QNP++ + Y+ L+ SV+ C++ N L D HW LRD+ A
Sbjct: 211 DQLNRLLHMVKSLVQNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTLRDYAAL 269
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAXXXXXXXXXXXXX 300
L++ I +G + + L ++ +L L DP R L HYGAV GL A
Sbjct: 270 LLSHIFWTHGDLVSGLYHQILLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVERVLYPH 329
Query: 301 XXXXXXXXEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 360
+ + N + + +VYGA+L A + + ++K + S
Sbjct: 330 LPAYWANLQAVLDDYSVSNAQVKADGHKVYGAILVAVERLL--KMKALSLTLAAEGGSA- 386
Query: 361 KTNGIVATLSNKRKTSMDLEEQP-PLKKIATDGPVDAVSTSSMPTPMEEDATAATP 415
+G V R+ S L P PL + G + P EE + P
Sbjct: 387 ALSGSVTGAVGFRENSPGLSPPPEPLSEPPL-GIASHLQAGGAGCPWEEWTPVSLP 441
Score = 114 (45.2 bits), Expect = 7.7e-25, Sum P(3) = 7.7e-25
Identities = 27/101 (26%), Positives = 54/101 (53%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH++R L+ +D + AL+ N E V G+ + L FR + +LFY++D+++ ++
Sbjct: 55 MRHAKRRKLSVEDFNRALRWSNTETVCGYGAQDALPFR-PLKEGELFYVEDREINLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPS 100
A +P+ +T + H ++G + P+ A+ + S
Sbjct: 114 LATNIPKGCAETMVRVHVSYLDGKGNLEPQGTVPTAVQSLS 154
Score = 51 (23.0 bits), Expect = 7.7e-25, Sum P(3) = 7.7e-25
Identities = 19/75 (25%), Positives = 34/75 (45%)
Query: 387 KIATDGPVDAVSTSSMPTPME---EDATAATPLDNSDADHPSPSSVQIPPDSGSESRSKR 443
+ +TD P+ + + P+E E ATAA L+++ +S+ I P R+
Sbjct: 458 RFSTDPPLAGAAPAGPSQPLEGRKETATAAPNLESTRKMPQLTASMNISPRQDGSPRT-- 515
Query: 444 DKGDSQAQKLSAILP 458
+ Q L+A +P
Sbjct: 516 ---EPQPPSLAATVP 527
>UNIPROTKB|F1MDZ8 [details] [associations]
symbol:TAF6L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 OMA:MPQLTAN
GeneTree:ENSGT00640000091486 EMBL:DAAA02063486 IPI:IPI00706361
Ensembl:ENSBTAT00000012482 ArrayExpress:F1MDZ8 Uniprot:F1MDZ8
Length = 665
Score = 242 (90.2 bits), Expect = 7.4e-24, Sum P(2) = 7.4e-24
Identities = 70/216 (32%), Positives = 105/216 (48%)
Query: 123 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 182
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V ++
Sbjct: 199 LTDDLLKYYQQVTR-AVLGDDPQLMKIALHDLQTNSKIAALLPYFVYVVSG-VKSVSHDL 256
Query: 183 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAK 240
L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A
Sbjct: 257 EQLHRLLQVARSLVRNPHLCLVPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAAL 315
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAXXXXXXXXXXXXX 300
L++ I YG + N L ++ +L L DP R L HYGAV GL A
Sbjct: 316 LLSHIFWTYGDLVNGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPH 375
Query: 301 XXXXXXXXEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
+ + N + + +VYGA+L A
Sbjct: 376 LSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 411
Score = 106 (42.4 bits), Expect = 7.4e-24, Sum P(2) = 7.4e-24
Identities = 26/99 (26%), Positives = 55/99 (55%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 101 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPA-REGELYFPEDREVNLVELA 159
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA 98
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 160 LATNIPKGCAETALRVHVSYLDGKGNLAPQGSVPSAVSS 198
>MGI|MGI:2444957 [details] [associations]
symbol:Taf6l "TAF6-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
MGI:MGI:2444957 GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0051090 CTD:10629 eggNOG:COG5095
HOGENOM:HOG000059613 HOVERGEN:HBG061566 KO:K03131 OrthoDB:EOG498V0F
EMBL:AK077149 EMBL:BC028647 IPI:IPI00153596 IPI:IPI00405376
RefSeq:NP_001171269.1 RefSeq:NP_666204.2 UniGene:Mm.220886
ProteinModelPortal:Q8R2K4 SMR:Q8R2K4 IntAct:Q8R2K4 STRING:Q8R2K4
PhosphoSite:Q8R2K4 PRIDE:Q8R2K4 Ensembl:ENSMUST00000177056
GeneID:225895 KEGG:mmu:225895 UCSC:uc008gmx.2 UCSC:uc008gmy.2
GeneTree:ENSGT00640000091486 InParanoid:Q8R2K4 NextBio:377857
Bgee:Q8R2K4 Genevestigator:Q8R2K4 GermOnline:ENSMUSG00000003680
Uniprot:Q8R2K4
Length = 616
Score = 234 (87.4 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 61/167 (36%), Positives = 92/167 (55%)
Query: 123 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 182
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V ++
Sbjct: 153 LTDDLLKYYQQVTR-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDL 210
Query: 183 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAK 240
L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A
Sbjct: 211 EQLHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAAL 269
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 287
L++ I +G + + L ++ +L L DP R L HYGAV GL A
Sbjct: 270 LLSHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHA 316
Score = 112 (44.5 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 27/99 (27%), Positives = 55/99 (55%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A DL++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPA-REGDLYFPEDREVSLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA 98
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS 152
>UNIPROTKB|I3LPI1 [details] [associations]
symbol:TAF6L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 OMA:MPQLTAN
GeneTree:ENSGT00640000091486 EMBL:FP312617
Ensembl:ENSSSCT00000022269 Uniprot:I3LPI1
Length = 624
Score = 233 (87.1 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 68/216 (31%), Positives = 105/216 (48%)
Query: 123 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 182
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V ++
Sbjct: 160 LTDDLLKYYQQVTR-AVLGDDPQLMKIALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDL 217
Query: 183 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAK 240
L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A
Sbjct: 218 EQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAAL 276
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAXXXXXXXXXXXXX 300
L++ I +G + + L ++ +L L DP R L HYGAV GL A
Sbjct: 277 LLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPH 336
Query: 301 XXXXXXXXEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
+ + N + + +VYGA+L A
Sbjct: 337 LSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 372
Score = 112 (44.5 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 27/99 (27%), Positives = 55/99 (55%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V D+
Sbjct: 62 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPA-REGELYFPEDREVNLVDLA 120
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA 98
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 121 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS 159
>UNIPROTKB|E2QUN8 [details] [associations]
symbol:TAF6L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0051090
"regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0006352 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0051090 GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 CTD:10629
KO:K03131 OMA:MPQLTAN GeneTree:ENSGT00640000091486
EMBL:AAEX03011662 RefSeq:XP_533259.2 Ensembl:ENSCAFT00000024787
GeneID:476051 KEGG:cfa:476051 Uniprot:E2QUN8
Length = 625
Score = 234 (87.4 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 70/236 (29%), Positives = 112/236 (47%)
Query: 123 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 182
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V ++
Sbjct: 160 LTDDLLKYYQQVTR-AVLGDDPQLMKIALQDLQTNSKIAALLPYFVYVVSG-VKSVSHDL 217
Query: 183 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAK 240
L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A
Sbjct: 218 EQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAAL 276
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAXXXXXXXXXXXXX 300
L++ I +G + + L ++ +L L DP R L HYGAV GL A
Sbjct: 277 LLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPH 336
Query: 301 XXXXXXXXEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPA 356
+ + N + + +VYGA+L A + + + + P P+
Sbjct: 337 LSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVAVERLLKMKAQAAEPNKGGPS 392
Score = 107 (42.7 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 26/99 (26%), Positives = 55/99 (55%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 62 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPA-REGELYFPEDREVNLVELA 120
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA 98
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 121 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS 159
>UNIPROTKB|Q9Y6J9 [details] [associations]
symbol:TAF6L "TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 6L"
species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051090 "regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA] [GO:0043966
"histone H3 acetylation" evidence=IDA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 GO:GO:0003677 EMBL:CH471076
GO:GO:0006352 GO:GO:0006357 GO:GO:0006338 GO:GO:0003713
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090 GO:GO:0043966
GO:GO:0000118 GO:GO:0030914 EMBL:AF069735 EMBL:AK314330
IPI:IPI00007957 RefSeq:NP_006464.1 UniGene:Hs.714400
ProteinModelPortal:Q9Y6J9 SMR:Q9Y6J9 IntAct:Q9Y6J9
MINT:MINT-1456123 STRING:Q9Y6J9 PhosphoSite:Q9Y6J9 DMDM:46577572
PaxDb:Q9Y6J9 PeptideAtlas:Q9Y6J9 PRIDE:Q9Y6J9
Ensembl:ENST00000294168 GeneID:10629 KEGG:hsa:10629 UCSC:uc001nvc.3
CTD:10629 GeneCards:GC11P062538 HGNC:HGNC:17305 MIM:602946
neXtProt:NX_Q9Y6J9 PharmGKB:PA38224 eggNOG:COG5095
HOGENOM:HOG000059613 HOVERGEN:HBG061566 InParanoid:Q9Y6J9 KO:K03131
OMA:MPQLTAN OrthoDB:EOG498V0F PhylomeDB:Q9Y6J9 ChiTaRS:TAF6L
GenomeRNAi:10629 NextBio:40385 ArrayExpress:Q9Y6J9 Bgee:Q9Y6J9
CleanEx:HS_TAF6L Genevestigator:Q9Y6J9 GermOnline:ENSG00000162227
Uniprot:Q9Y6J9
Length = 622
Score = 224 (83.9 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 68/216 (31%), Positives = 103/216 (47%)
Query: 123 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 182
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V ++
Sbjct: 153 LTDDLLKYYHQVTR-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVSHDL 210
Query: 183 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAK 240
L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD A
Sbjct: 211 EQLHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGAAL 269
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAXXXXXXXXXXXXX 300
L++ I +G + + L + +L L DP R L HYGAV GL A
Sbjct: 270 LLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPH 329
Query: 301 XXXXXXXXEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
+ + N + + +VYGA+L A
Sbjct: 330 LSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
Score = 108 (43.1 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 26/99 (26%), Positives = 55/99 (55%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPA-REGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA 98
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS 152
>UNIPROTKB|C9JTY6 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR004823
InterPro:IPR009072 Pfam:PF02969 SMART:SM00803 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 HOGENOM:HOG000253001
IPI:IPI01011696 ProteinModelPortal:C9JTY6 SMR:C9JTY6 STRING:C9JTY6
Ensembl:ENST00000493322 ArrayExpress:C9JTY6 Bgee:C9JTY6
Uniprot:C9JTY6
Length = 255
Score = 254 (94.5 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 48/93 (51%), Positives = 64/93 (68%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 92
I PLPR PLD + HWL+IEG QP IPEN P
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPP 150
>UNIPROTKB|E5RHA1 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00975576
ProteinModelPortal:E5RHA1 SMR:E5RHA1 Ensembl:ENST00000523306
ArrayExpress:E5RHA1 Bgee:E5RHA1 Uniprot:E5RHA1
Length = 141
Score = 254 (94.5 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 48/93 (51%), Positives = 64/93 (68%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 48 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 107
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 92
I PLPR PLD + HWL+IEG QP IPEN P
Sbjct: 108 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPP 140
>FB|FBgn0014342 [details] [associations]
symbol:mia "meiosis I arrest" species:7227 "Drosophila
melanogaster" [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007141 "male meiosis I" evidence=IMP] [GO:0048515 "spermatid
differentiation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0007286 "spermatid development"
evidence=TAS] [GO:0007126 "meiosis" evidence=TAS] [GO:0005669
"transcription factor TFIID complex" evidence=ISS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=ISS] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] InterPro:IPR011442 Pfam:PF07571 GO:GO:0005730
GO:GO:0007286 GO:GO:0001673 GO:GO:0006367 GO:GO:0010468
GO:GO:0051090 GO:GO:0007141 GO:GO:0005669 EMBL:AY752878
ProteinModelPortal:Q5UEC4 SMR:Q5UEC4 STRING:Q5UEC4 PRIDE:Q5UEC4
FlyBase:FBgn0014342 InParanoid:Q5UEC4 OrthoDB:EOG41G1KF
ArrayExpress:Q5UEC4 Bgee:Q5UEC4 Uniprot:Q5UEC4
Length = 593
Score = 255 (94.8 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 72/210 (34%), Positives = 116/210 (55%)
Query: 81 EGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVS 140
E VQ +PE P ++ P T + + V +K ++ LS E Q +F+ +TE V
Sbjct: 146 ESVQESVPEPVPETSLEPPPMHTGWLKVE--QVLLKPSKRYPLSMEQQNFFELVTEACVG 203
Query: 141 RSDS--VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLL 196
+S VL AL +++TD L L+P T F+AD V+ + N LL LMR+V LL
Sbjct: 204 DLESRRVL---ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLYLMRMVRALL 260
Query: 197 QNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAICKRYGHVYNT 255
N + YLH L+P+V++CL+AK++ + +++HW LR+++ ++A I +++ N
Sbjct: 261 GNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALREYSGNIMAHIVRQFDAADNG 320
Query: 256 LQTRLTKTLLNALLDPKRALTQHYGAVQGL 285
+ R+ ALL K+ LT +GAV GL
Sbjct: 321 ILPRVIGVYNKALL--KKPLTTVFGAVIGL 348
>RGD|1310123 [details] [associations]
symbol:Taf6l "TAF6-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0030914 "STAGA
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=ISO]
InterPro:IPR004823 InterPro:IPR009072 InterPro:IPR011442
Pfam:PF02969 Pfam:PF07571 SMART:SM00803 RGD:1310123 GO:GO:0005634
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0051090
IPI:IPI00390765 Ensembl:ENSRNOT00000037327 UCSC:RGD:1310123
ArrayExpress:D4ABK5 Uniprot:D4ABK5
Length = 591
Score = 166 (63.5 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 40/105 (38%), Positives = 60/105 (57%)
Query: 185 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLV 242
L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L+
Sbjct: 188 LHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLL 246
Query: 243 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 287
+ I +G + + L ++ +L L DP R L HYGAV GL A
Sbjct: 247 SHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHA 291
Score = 107 (42.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 26/99 (26%), Positives = 55/99 (55%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPA-REGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA 98
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS 152
>UNIPROTKB|C9JIS2 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0003677 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00946556
ProteinModelPortal:C9JIS2 SMR:C9JIS2 STRING:C9JIS2
Ensembl:ENST00000449571 ArrayExpress:C9JIS2 Bgee:C9JIS2
Uniprot:C9JIS2
Length = 134
Score = 184 (69.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 36/77 (46%), Positives = 51/77 (66%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCH 76
I PLPR PLD + H
Sbjct: 118 INTPLPRVPLDVCLKAH 134
>UNIPROTKB|C9JFL8 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0005737 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 HOGENOM:HOG000159894
IPI:IPI00926118 ProteinModelPortal:C9JFL8 SMR:C9JFL8 STRING:C9JFL8
Ensembl:ENST00000440225 ArrayExpress:C9JFL8 Bgee:C9JFL8
Uniprot:C9JFL8
Length = 233
Score = 183 (69.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 61/176 (34%), Positives = 89/176 (50%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVC--HWLAIEGVQPVI---P---ENAPVQAI---AAPSNGTNNEQK 108
I PLPR PLD + E +P+ P E+ P++ A ++G E+K
Sbjct: 118 INTPLPRVPLDVCLKAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKK 177
Query: 109 DGLPVE-IKLPVKHILSREL---QLYFDKITELAVSRSDSVLFKQALVSLATDSGL 160
+E L +K EL Q + K A S +AL S+ATD GL
Sbjct: 178 APPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGL 233
>UNIPROTKB|C9J088 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00926538
ProteinModelPortal:C9J088 SMR:C9J088 STRING:C9J088
Ensembl:ENST00000452438 ArrayExpress:C9J088 Bgee:C9J088
Uniprot:C9J088
Length = 156
Score = 178 (67.7 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 35/74 (47%), Positives = 50/74 (67%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSI 73
I PLPR PLD +
Sbjct: 118 INTPLPRVPLDVCL 131
>WB|WBGene00021363 [details] [associations]
symbol:taf-6.2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR011442 Pfam:PF07571 GO:GO:0005634 GO:GO:0009792
GO:GO:0000003 GO:GO:0051090 eggNOG:COG5095
GeneTree:ENSGT00640000091486 EMBL:FO080976 RefSeq:NP_500397.1
ProteinModelPortal:Q965Y0 SMR:Q965Y0 STRING:Q965Y0 PaxDb:Q965Y0
EnsemblMetazoa:Y37E11AL.8 GeneID:177129 KEGG:cel:CELE_Y37E11AL.8
UCSC:Y37E11AL.8 CTD:177129 WormBase:Y37E11AL.8 HOGENOM:HOG000018550
InParanoid:Q965Y0 OMA:EMSRGRF NextBio:895468 Uniprot:Q965Y0
Length = 814
Score = 201 (75.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 50/161 (31%), Positives = 91/161 (56%)
Query: 76 HWLAIEGVQPVIPENA-PVQA---IAAPSNGTNNEQKDGLPVEIK---LPVKHI----LS 124
HWL ++G+QP +PEN P + + T G+P IK +P K + S
Sbjct: 212 HWLVVDGIQPCLPENVIPSEVKRRFQEQQHETQRAHGFGVP-GIKREPMPEKRMSTQTFS 270
Query: 125 RELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNY 182
E Q+ + +IT++ S S S+ ++ L ++ TD+G+ L F +A+ + G N
Sbjct: 271 MEHQVLYSEITKILTSGS-SLQRQKVLETIETDTGIQFLAGRFVILIAEGTRLHIGTRNI 329
Query: 183 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 223
L L+++ W+L++NP+I++E YL+ L+PS+++C+V+K +
Sbjct: 330 RGLANLLKLTWSLMKNPNIRLEKYLYVLVPSLISCVVSKNM 370
Score = 45 (20.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 232 WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
++LR+ + KL+A + +Y ++ L R+ +TL L
Sbjct: 414 FKLREASGKLLAELSSQYQNL--NLNVRIIQTLRGVL 448
>UNIPROTKB|E5RKA5 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00983929
ProteinModelPortal:E5RKA5 SMR:E5RKA5 Ensembl:ENST00000520135
ArrayExpress:E5RKA5 Bgee:E5RKA5 Uniprot:E5RKA5
Length = 114
Score = 160 (61.4 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 48 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 107
Query: 60 IEAPLPR 66
I PLPR
Sbjct: 108 INTPLPR 114
>WB|WBGene00006387 [details] [associations]
symbol:taf-6.1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR004823 InterPro:IPR009072
InterPro:IPR011442 Pfam:PF02969 Pfam:PF07571 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 GO:GO:0051090
eggNOG:COG5095 KO:K03131 GeneTree:ENSGT00640000091486 EMBL:FO081732
RefSeq:NP_493919.1 ProteinModelPortal:Q9GZI6 SMR:Q9GZI6
IntAct:Q9GZI6 STRING:Q9GZI6 PaxDb:Q9GZI6 EnsemblMetazoa:W09B6.2
GeneID:173498 KEGG:cel:CELE_W09B6.2 UCSC:W09B6.2 CTD:173498
WormBase:W09B6.2 InParanoid:Q9GZI6 OMA:IIYAGRV NextBio:879913
Uniprot:Q9GZI6
Length = 470
Score = 165 (63.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 47/173 (27%), Positives = 86/173 (49%)
Query: 83 VQPVIPE-NAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK----HILSRELQLYFDKITEL 137
V +IPE N P + + + K ++ K+ +K IL+ E Q++ I +
Sbjct: 182 VMTMIPEKNTPSSSTTSSLQMFRDAVKTA-KIDQKVGLKPSTIEILTVEQQIFMKDIITV 240
Query: 138 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN--YSLLFALMRVVWNL 195
+ + D +AL +L TD+GL +P+ T + +S ++ SL+ RV+ +L
Sbjct: 241 CMGQDDKKRH-EALYTLETDAGLQVFLPHLTERICKSISANISQRCLSLIIYAGRVLRSL 299
Query: 196 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICK 247
N + LH ++P++++C V + + R DNHW LRDF+AK + + +
Sbjct: 300 SHNKACDMTVTLHHVLPALLSCCVGRNMCLRPETDNHWALRDFSAKTLVGLVR 352
>UNIPROTKB|C9J7C4 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0003677 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00970799
ProteinModelPortal:C9J7C4 SMR:C9J7C4 STRING:C9J7C4
Ensembl:ENST00000451699 ArrayExpress:C9J7C4 Bgee:C9J7C4
Uniprot:C9J7C4
Length = 114
Score = 124 (48.7 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVE 55
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVD 113
>UNIPROTKB|F8WEJ7 [details] [associations]
symbol:TAF6 "Transcription initiation factor TFIID subunit
6" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
EMBL:AC073842 HGNC:HGNC:11540 IPI:IPI00925005
ProteinModelPortal:F8WEJ7 SMR:F8WEJ7 Ensembl:ENST00000421980
ArrayExpress:F8WEJ7 Bgee:F8WEJ7 Uniprot:F8WEJ7
Length = 114
Score = 119 (46.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDV 54
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K++
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEL 112
>UNIPROTKB|E9PP94 [details] [associations]
symbol:TAF6L "TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 6L"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR004823 InterPro:IPR009072 Pfam:PF02969 SMART:SM00803
GO:GO:0005634 EMBL:AP001160 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 HGNC:HGNC:17305 ChiTaRS:TAF6L IPI:IPI00983560
ProteinModelPortal:E9PP94 SMR:E9PP94 Ensembl:ENST00000529509
UCSC:uc009yof.3 ArrayExpress:E9PP94 Bgee:E9PP94 Uniprot:E9PP94
Length = 145
Score = 103 (41.3 bits), Expect = 0.00045, P = 0.00045
Identities = 25/92 (27%), Positives = 51/92 (55%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPA-REGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENA 91
A +P+ +T++ H ++G + P+ +
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGS 145
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 495 474 0.0010 118 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 616 (65 KB)
Total size of DFA: 279 KB (2146 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.40u 0.14s 45.54t Elapsed: 00:00:03
Total cpu time: 45.41u 0.14s 45.55t Elapsed: 00:00:03
Start: Tue May 21 11:23:35 2013 End: Tue May 21 11:23:38 2013