BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011039
(495 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224129098|ref|XP_002320500.1| predicted protein [Populus trichocarpa]
gi|222861273|gb|EEE98815.1| predicted protein [Populus trichocarpa]
Length = 532
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/496 (75%), Positives = 421/496 (84%), Gaps = 12/496 (2%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RT LTTDDVD AL L NVEP+YGFASGG L+F+RAIG+RDLFY+DDKD++FKDVI
Sbjct: 48 MRHSKRTRLTTDDVDGALNLTNVEPIYGFASGGALQFKRAIGHRDLFYVDDKDIDFKDVI 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
EAPLP+APLDT++VCHWLAIEGVQP IPENAP++ IA PS+G +EQ D PV+IKLPVK
Sbjct: 108 EAPLPKAPLDTAVVCHWLAIEGVQPAIPENAPLEVIAPPSDGKISEQNDEFPVDIKLPVK 167
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
H+LSRELQLYFDKIT+L V RSDSVLFK+ALVSLATDSGLHPL+PYFTYF+ADEV+RGLN
Sbjct: 168 HVLSRELQLYFDKITDLTVRRSDSVLFKEALVSLATDSGLHPLIPYFTYFIADEVARGLN 227
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
+YSLLFALMRVVW+LLQNPHI IEPYLHQLMPSVVTCLVA++LGNR ADNHWELRDFTA
Sbjct: 228 DYSLLFALMRVVWSLLQNPHIHIEPYLHQLMPSVVTCLVARKLGNRFADNHWELRDFTAN 287
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
LVA+ICKR+GHVYN+LQTRLTKTLLNALLDPKR+LTQHYGA+QGLAALGPNVVRLLLLPN
Sbjct: 288 LVASICKRFGHVYNSLQTRLTKTLLNALLDPKRSLTQHYGAIQGLAALGPNVVRLLLLPN 347
Query: 301 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 360
L PYL LLEPEMLLEKQKNE+KRHEAW VYGALL AAGQ IYDRLK+FP L S PA +V
Sbjct: 348 LKPYLQLLEPEMLLEKQKNEMKRHEAWHVYGALLCAAGQSIYDRLKMFPALMSHPACAVL 407
Query: 361 KTN-GIVATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNS 419
+TN +V +KRK SM+ EQPP KKIATDGPVD P P+ + T
Sbjct: 408 RTNEKVVTKRPDKRKASMEHMEQPPPKKIATDGPVDMQVEPIAPVPLGDSKTGL------ 461
Query: 420 DADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFG 479
S SS P S + SR+++DKGDSQA K SAIL QVWKDDLNSG LLVSLFELFG
Sbjct: 462 -----STSSEHTPNYSEAGSRNQKDKGDSQAIKTSAILSQVWKDDLNSGHLLVSLFELFG 516
Query: 480 EGILSFIPAPEMSLFL 495
E ILSFIP+PEMSLFL
Sbjct: 517 ESILSFIPSPEMSLFL 532
>gi|225446952|ref|XP_002264290.1| PREDICTED: transcription initiation factor TFIID subunit 6 [Vitis
vinifera]
gi|297739126|emb|CBI28777.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/499 (74%), Positives = 435/499 (87%), Gaps = 7/499 (1%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RT LTTDDVD AL LRNVEP+YGF SGGPLRF+RA+G+++LFY+DDKD++FKDVI
Sbjct: 48 MRHSKRTVLTTDDVDIALNLRNVEPIYGFTSGGPLRFKRAVGHKNLFYIDDKDLDFKDVI 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD-GLPVEIKLPV 119
EAPLP+APLD ++VCHWLAIEGVQP IPENAPV+ IAAPS+G EQKD GLPV+IKLP+
Sbjct: 108 EAPLPKAPLDAAVVCHWLAIEGVQPAIPENAPVEVIAAPSDGKKFEQKDDGLPVDIKLPI 167
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
KH+LSRELQLYFDKI +L V+RSDS LFK+ALVSLATDSGLHPLVPYFTYF++DEVSRGL
Sbjct: 168 KHVLSRELQLYFDKIIDLTVNRSDSALFKEALVSLATDSGLHPLVPYFTYFISDEVSRGL 227
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
N+++LLFALMRVVW+LLQNPHI IEPYLHQLMPSVVTCLVAKR+GNRLADNHWELRDFTA
Sbjct: 228 NDFNLLFALMRVVWSLLQNPHIHIEPYLHQLMPSVVTCLVAKRIGNRLADNHWELRDFTA 287
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
LVA+ICKR+GHVYN LQTRLTKTLL+A LDPKR++TQHYGA+QGLAALGPN+VRLL++P
Sbjct: 288 NLVASICKRFGHVYNNLQTRLTKTLLHAFLDPKRSMTQHYGAIQGLAALGPNMVRLLIVP 347
Query: 300 NLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSV 359
NL PYL LLEPEMLLEKQKNE+KRHEAW VYGALL+A GQ IYDRLK+FP L S PAR V
Sbjct: 348 NLEPYLRLLEPEMLLEKQKNELKRHEAWCVYGALLRATGQSIYDRLKMFPALPSPPAR-V 406
Query: 360 WKTNG-IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLD 417
++TNG +V + NKRK + + LE+QP LKKIATDGP+D V T ++ + M+ T P+
Sbjct: 407 FRTNGRVVTSPPNKRKANNEHLEQQPSLKKIATDGPMDVVPT-NLSSNMQPPETKG-PVP 464
Query: 418 NSDADH-PSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFE 476
++D D PS SS QIP + S+SR ++ KGDS+A K+SA+L Q W+DDL SG LLVSLFE
Sbjct: 465 STDPDMGPSSSSRQIPHGNISDSRDRKGKGDSRALKMSAVLTQTWRDDLKSGHLLVSLFE 524
Query: 477 LFGEGILSFIPAPEMSLFL 495
LFGE IL FIPAPEMSLFL
Sbjct: 525 LFGESILPFIPAPEMSLFL 543
>gi|255576099|ref|XP_002528944.1| transcription initiation factor tfiid, putative [Ricinus communis]
gi|223531590|gb|EEF33418.1| transcription initiation factor tfiid, putative [Ricinus communis]
Length = 542
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/496 (74%), Positives = 422/496 (85%), Gaps = 2/496 (0%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RTTLT DVD AL LRN+EPVYG ASGG L+F+RAIG+RDLFY+DDKD++FKDVI
Sbjct: 48 MRHSKRTTLTCYDVDGALNLRNIEPVYGVASGGALQFKRAIGHRDLFYIDDKDIDFKDVI 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
EAPLP+APLDTSIVCHWLAIEGVQP IPENAP++ IA P +G NNE KDGLPV+IKLPV+
Sbjct: 108 EAPLPKAPLDTSIVCHWLAIEGVQPAIPENAPLEVIAPPPDGKNNELKDGLPVDIKLPVR 167
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
H+LSRELQLYFDKITEL + RSD LFK+ALVSLATD GLHPLVPYFT F+ADEVSR L+
Sbjct: 168 HVLSRELQLYFDKITELTMRRSDLPLFKEALVSLATDPGLHPLVPYFTCFIADEVSRSLS 227
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
++ LLFALMRVV +LLQNPHI IEPYLHQLMPSVVTCLVAKRLGNR ADNHWELRDFTA
Sbjct: 228 DFQLLFALMRVVRSLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNRFADNHWELRDFTAN 287
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
LVA+ICKR+GHVY++LQTRLTKTLLNAL DPKR+LTQHYGA+QGLAALGPNVVR L+LPN
Sbjct: 288 LVASICKRFGHVYSSLQTRLTKTLLNALFDPKRSLTQHYGAIQGLAALGPNVVRFLVLPN 347
Query: 301 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 360
L PYL +LEPEMLLEKQKNE+KRHEAW VYGALL AAGQC+YDRLK+FP S PA +VW
Sbjct: 348 LKPYLQVLEPEMLLEKQKNEMKRHEAWLVYGALLNAAGQCLYDRLKLFPLFPSPPAHAVW 407
Query: 361 KTNG-IVATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNS 419
+TNG I+ NKRK SM EQP K+IATD PV+A+ST S P+ M+ +AT P ++
Sbjct: 408 RTNGKIITAQLNKRKASMQPAEQPLPKRIATDDPVNALSTDSSPSRMQWEATTPVPSSDT 467
Query: 420 DADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFG 479
+A S SS Q+P + S+ +++R KGD K SAIL QVWKDDL SG+LL SLFELFG
Sbjct: 468 NAS-ASTSSEQMPTNHESDCKTERVKGDGGVMKTSAILNQVWKDDLKSGQLLASLFELFG 526
Query: 480 EGILSFIPAPEMSLFL 495
EGILSFIP+PEMSLFL
Sbjct: 527 EGILSFIPSPEMSLFL 542
>gi|449444699|ref|XP_004140111.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cucumis sativus]
Length = 543
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/499 (71%), Positives = 415/499 (83%), Gaps = 7/499 (1%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RTTLT +DVD AL LRNVEP+YGFASGGPLRF+RAIG+RDLFYL+DKD+EFKD+I
Sbjct: 48 MRHSKRTTLTANDVDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDII 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
+APLP+AP DT++ CHWLAIEGVQP IPENAPV+ I PS+ +NEQ GLPV+IKLPVK
Sbjct: 108 DAPLPKAPFDTAVFCHWLAIEGVQPAIPENAPVEVILPPSDAKSNEQMGGLPVDIKLPVK 167
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
HILS+ELQLYFDKITEL VSRS S+LFK+ALVSLATDSGLHPLVPYFT F+ADEV+RGL
Sbjct: 168 HILSKELQLYFDKITELVVSRSSSILFKKALVSLATDSGLHPLVPYFTCFIADEVARGLG 227
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
+YSLLFALMRVVW+LLQNPHI IEPYLHQ+MPSVVTCLVAKRLGNR +DNHWELRDFTAK
Sbjct: 228 DYSLLFALMRVVWSLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRFSDNHWELRDFTAK 287
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
+VA ICKR+GHVYNTLQT+LTKTLLNA LDPKR+LTQHYGA+QGLAALG NVV LL+LPN
Sbjct: 288 VVALICKRFGHVYNTLQTKLTKTLLNAFLDPKRSLTQHYGAIQGLAALGMNVVHLLILPN 347
Query: 301 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 360
L PYL LLEPEMLL QKNE+KRHEAWRVYGALL+A GQCIYD +KIFPPL S+PA S+
Sbjct: 348 LEPYLGLLEPEMLLANQKNEMKRHEAWRVYGALLRAVGQCIYDHVKIFPPLPSMPAGSIL 407
Query: 361 KTNG--IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLD 417
+TN I T NKRK + D LE QPPLKK+ D P+ + T+S + ME A P
Sbjct: 408 RTNARVITTTFLNKRKENADHLEGQPPLKKMVMDSPMGVMPTNSSASHME---GAVNPAS 464
Query: 418 NSDADHPSPSSVQ-IPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFE 476
+S++ P+S Q + ++ S S++ K D Q K SA+L QVWK+DL SGKLL S+ +
Sbjct: 465 SSNSSLILPTSSQPLQNETIPGSNSRKGKYDDQILKRSAVLSQVWKEDLKSGKLLTSMLD 524
Query: 477 LFGEGILSFIPAPEMSLFL 495
LFGE +L FIPAPE+S+FL
Sbjct: 525 LFGESMLCFIPAPELSMFL 543
>gi|449453563|ref|XP_004144526.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cucumis sativus]
Length = 544
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/498 (71%), Positives = 412/498 (82%), Gaps = 4/498 (0%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RTTLT DDVD AL LRNVEP+YGFASGGPLRF+RA+G+RDLFYL+DKD+EFKDVI
Sbjct: 48 MRHSKRTTLTADDVDGALNLRNVEPMYGFASGGPLRFKRAMGHRDLFYLEDKDLEFKDVI 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
+APLP+APLD ++ CHWLAIEGVQP IPENAPV+ I PS+ ++EQKD +PV+IKLPVK
Sbjct: 108 DAPLPKAPLDAAVFCHWLAIEGVQPAIPENAPVEVILPPSDTKSSEQKDEVPVDIKLPVK 167
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
HILS+ELQLYFDKITEL VSRS + LFK+ALVSLATDSGLHPLVPYFT ++ADEV+RGL
Sbjct: 168 HILSKELQLYFDKITELVVSRSSTDLFKKALVSLATDSGLHPLVPYFTCYIADEVARGLG 227
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
+YSLLFALMRVVW+LLQNPHI IEPYLHQ+MPSVVTCLVAKRLG+R +DNHWELRDFTAK
Sbjct: 228 DYSLLFALMRVVWSLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGSRFSDNHWELRDFTAK 287
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
+VA ICKR+GHVYNTLQT+LTKTLLNA LDPKR+LTQHYGA++GLAALG NVV LL+LPN
Sbjct: 288 VVALICKRFGHVYNTLQTKLTKTLLNAFLDPKRSLTQHYGAIRGLAALGMNVVHLLILPN 347
Query: 301 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 360
L PYL LLEPEMLL QKNE+KRHEAW VYGALL+A GQCIY+R+KIFPPL S PA SV
Sbjct: 348 LEPYLGLLEPEMLLANQKNEMKRHEAWHVYGALLRAVGQCIYERIKIFPPLLSTPAGSVL 407
Query: 361 KTNG--IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLD 417
+TN I T NKRK + D LE QPPLK+++ DGP+ + T+S + ME A
Sbjct: 408 RTNARTITTTFPNKRKANADYLEGQPPLKRMSIDGPMGVMLTNSSASHMEGTVVPAAS-G 466
Query: 418 NSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFEL 477
NS+ P+ S S S S++ K D Q K SA+L QVWK+DLNSGKLL S+ +L
Sbjct: 467 NSNLVSPTSSGQMQNEAISSGSTSRKGKHDDQILKKSAVLSQVWKEDLNSGKLLTSMLDL 526
Query: 478 FGEGILSFIPAPEMSLFL 495
FGE +L FIPAPE+SLFL
Sbjct: 527 FGESMLCFIPAPELSLFL 544
>gi|356499648|ref|XP_003518649.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Glycine max]
Length = 544
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/499 (73%), Positives = 417/499 (83%), Gaps = 6/499 (1%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RTTLT DDVD AL L+NVEP+YGFASGGPLRF+RA+G+RDLFY+DDKDV+ KDVI
Sbjct: 48 MRHSKRTTLTADDVDAALNLKNVEPIYGFASGGPLRFKRAVGHRDLFYIDDKDVDLKDVI 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD-GLPVEIKLPV 119
EA LP+APLDT++ CHWLAIEGVQP IPENAPV+ I+APS+ +EQKD LPV+IKLPV
Sbjct: 108 EASLPKAPLDTAVTCHWLAIEGVQPAIPENAPVEVISAPSDVKKHEQKDDNLPVDIKLPV 167
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
KH+LSRELQLYFDK+ EL +S SDSVLFK+ALVSLATDSGLHPLVPYFT F+ADEVSRGL
Sbjct: 168 KHVLSRELQLYFDKVAELTLSESDSVLFKEALVSLATDSGLHPLVPYFTCFIADEVSRGL 227
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
NN+ LLFALMRVV +LLQNPHIQIEPYLHQLMPSVVTCLVAKRLG RLADNHWELRDFTA
Sbjct: 228 NNFPLLFALMRVVSSLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGTRLADNHWELRDFTA 287
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
LVA+ICKR+GHVY+ LQ+RLTKTLLNA LDPK+ALTQHYGA+QGL ALGPNVVRLLLLP
Sbjct: 288 HLVASICKRFGHVYSNLQSRLTKTLLNAFLDPKKALTQHYGAIQGLGALGPNVVRLLLLP 347
Query: 300 NLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSV 359
NL Y+ LLEPEMLLEKQKNE+KRHEAWRVYGALL+AAGQCIYDRLKIFP S P +V
Sbjct: 348 NLETYMQLLEPEMLLEKQKNELKRHEAWRVYGALLRAAGQCIYDRLKIFPTFPSPPLHAV 407
Query: 360 WKTNGIVATLSN-KRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDA-TAATPL 416
WKTN V T S KRK S D LE+QPPLKK ATDG V + P +E+A T A+
Sbjct: 408 WKTNSKVLTSSTYKRKASPDQLEQQPPLKKAATDGEVGVDLMNFSPVHKQEEAGTQASSA 467
Query: 417 DNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFE 476
D+ S SS Q+ ++ + + +GD+QA K SA L QVWKD+LNSG+ LVSLFE
Sbjct: 468 DSIIGT--SSSSAQMKNETTLDGELRGKRGDTQALKTSAALTQVWKDELNSGRTLVSLFE 525
Query: 477 LFGEGILSFIPAPEMSLFL 495
LFGEGILSFI APEM +FL
Sbjct: 526 LFGEGILSFIKAPEMYMFL 544
>gi|357503231|ref|XP_003621904.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
gi|355496919|gb|AES78122.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
Length = 562
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/515 (66%), Positives = 408/515 (79%), Gaps = 20/515 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RTTLT DDVD AL L+NVEP+YGFASGGPLRF+RA+G+RDLFY+DDKD++ KDVI
Sbjct: 48 MRHSKRTTLTADDVDAALNLKNVEPIYGFASGGPLRFKRAVGHRDLFYIDDKDLDLKDVI 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD-GLPVEIKLPV 119
EA LP+APLDT++ CHWLAIEGVQP IPENAPV I+APS+ +EQKD LPV+IKLPV
Sbjct: 108 EAALPKAPLDTALTCHWLAIEGVQPAIPENAPVDVISAPSDIKKHEQKDDNLPVDIKLPV 167
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
KH+LSRELQLYFDK+TELA++ DSVLFK+ALVSLATDSGLHPLVPYFT FVADEVSRGL
Sbjct: 168 KHVLSRELQLYFDKVTELALNEPDSVLFKEALVSLATDSGLHPLVPYFTCFVADEVSRGL 227
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
+N+ LLFALMRVV +LLQNPHI IEPYLHQLMPS+VTCLVAKRLG+RL DNHWELRDFTA
Sbjct: 228 SNFPLLFALMRVVNSLLQNPHIHIEPYLHQLMPSIVTCLVAKRLGSRLTDNHWELRDFTA 287
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
LVA+ICKR+GHVY+ LQ+RL+KTLLNA DPK+A+TQHYGA+QGL ALGPNVVRLLLLP
Sbjct: 288 NLVASICKRFGHVYSNLQSRLSKTLLNAFSDPKKAMTQHYGAIQGLGALGPNVVRLLLLP 347
Query: 300 NLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSV 359
NL Y+ LLEPEMLLE QKNE+KRHEAWRVYGALL+AAGQC+Y LK+FP S +V
Sbjct: 348 NLEAYIRLLEPEMLLETQKNEMKRHEAWRVYGALLRAAGQCVYVSLKLFPAFPSPLPHTV 407
Query: 360 WKTNGIVATL-SNKRKTS-MDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDAT---AAT 414
WKT+ V T NKRK S M+LE+QPPLKK+ TDG V V +S + EE+ ++
Sbjct: 408 WKTSASVLTSPPNKRKASPMELEQQPPLKKVDTDGEVSVVQENSSASHKEEETVTQASSA 467
Query: 415 PLDNSDADHPSPSSVQIPPD-----SGSESRSKR---------DKGDSQAQKLSAILPQV 460
L A + +I D SG +++ + GD+Q K+S++L +
Sbjct: 468 ELKIGAASSSGETKNKITTDGVVRSSGGDTQDNKITTDGVVRSSGGDTQDLKISSVLAHI 527
Query: 461 WKDDLNSGKLLVSLFELFGEGILSFIPAPEMSLFL 495
WKD+LNSG++L SL ELFGE ILSFI EM +FL
Sbjct: 528 WKDELNSGRVLTSLVELFGENILSFIQNREMCMFL 562
>gi|225460839|ref|XP_002276969.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Vitis vinifera]
Length = 543
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/501 (64%), Positives = 399/501 (79%), Gaps = 11/501 (2%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RT LT +DVD ALKLRNVEP+YGF SGGP +F+RA G++DLFY+DDKDVEFKD+I
Sbjct: 48 MRHSKRTILTVNDVDSALKLRNVEPLYGFTSGGPRQFKRAAGHKDLFYVDDKDVEFKDLI 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQK-DGLPVEIKLPV 119
EAPLP+ PLDT ++ HWLAIEGVQP I ENAP++A+A PS+ +E K DGLPV+ KLPV
Sbjct: 108 EAPLPKTPLDTGVITHWLAIEGVQPAISENAPIEALAVPSDNKKSEYKEDGLPVDTKLPV 167
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
KH+LSRELQLYFDKI EL +SRSDS+LFK+ALVSLATDSG+HPLVPYFTYF+ADEV+R L
Sbjct: 168 KHVLSRELQLYFDKIKELTLSRSDSILFKEALVSLATDSGIHPLVPYFTYFIADEVTRNL 227
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
N++S+LFALMRV +LLQN I IEPYLHQLMPS++TCLVAKRLG+R +DNHWELR FTA
Sbjct: 228 NDFSILFALMRVARSLLQNQQIHIEPYLHQLMPSIITCLVAKRLGSRFSDNHWELRSFTA 287
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
LVA++CKRYGHVY+ LQ R+T+TLL+A LDP +AL QHYGA+QGLAA GP+VVRLL+LP
Sbjct: 288 NLVASVCKRYGHVYHNLQPRVTRTLLHAFLDPTKALPQHYGAIQGLAAFGPSVVRLLILP 347
Query: 300 NLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSV 359
NL PYL LLEPEM LEKQKN +KRHEAWRVYGALL AAG C+YDRLK FP L S P R++
Sbjct: 348 NLEPYLRLLEPEMQLEKQKNGMKRHEAWRVYGALLCAAGTCMYDRLKTFPNLLSPPTRAI 407
Query: 360 WKTN-GIVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTP---MEEDATAAT 414
K+N I+ T +KRK S D L +QPPLKK+ATDG + + +S+ + + +T
Sbjct: 408 LKSNKKILPTKPSKRKASTDNLMQQPPLKKLATDGSMGVMPINSLAVDKQGLTGGFSTST 467
Query: 415 PLDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSL 474
+ +SD S S Q+ ++ S R R+ G ++A K SA+L Q WK D+N+G+L SL
Sbjct: 468 AVGSSDVGLSSMSQ-QLASENISGGR--REVG-TRALKASAVLAQAWK-DVNAGQLSASL 522
Query: 475 FELFGEGILSFIPAPEMSLFL 495
FE FGE + F P+PE+SLFL
Sbjct: 523 FEYFGESMFCFTPSPELSLFL 543
>gi|297737507|emb|CBI26708.3| unnamed protein product [Vitis vinifera]
Length = 547
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/505 (63%), Positives = 396/505 (78%), Gaps = 15/505 (2%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RT LT +DVD ALKLRNVEP+YGF SGGP +F+RA G++DLFY+DDKDVEFKD+I
Sbjct: 48 MRHSKRTILTVNDVDSALKLRNVEPLYGFTSGGPRQFKRAAGHKDLFYVDDKDVEFKDLI 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQK-DGLPVEIKLPV 119
EAPLP+ PLDT ++ HWLAIEGVQP I ENAP++A+A PS+ +E K DGLPV+ KLPV
Sbjct: 108 EAPLPKTPLDTGVITHWLAIEGVQPAISENAPIEALAVPSDNKKSEYKEDGLPVDTKLPV 167
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
KH+LSRELQLYFDKI EL +SRSDS+LFK+ALVSLATDSG+HPLVPYFTYF+ADEV+R L
Sbjct: 168 KHVLSRELQLYFDKIKELTLSRSDSILFKEALVSLATDSGIHPLVPYFTYFIADEVTRNL 227
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
N++S+LFALMRV +LLQN I IEPYLHQLMPS++TCLVAKRLG+R +DNHWELR FTA
Sbjct: 228 NDFSILFALMRVARSLLQNQQIHIEPYLHQLMPSIITCLVAKRLGSRFSDNHWELRSFTA 287
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
LVA++CKRYGHVY+ LQ R+T+TLL+A LDP +AL QHYGA+QGLAA GP+VVRLL+LP
Sbjct: 288 NLVASVCKRYGHVYHNLQPRVTRTLLHAFLDPTKALPQHYGAIQGLAAFGPSVVRLLILP 347
Query: 300 NLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSV 359
NL PYL LLEPEM LEKQKN +KRHEAWRVYGALL AAG C+YDRLK FP L S P R++
Sbjct: 348 NLEPYLRLLEPEMQLEKQKNGMKRHEAWRVYGALLCAAGTCMYDRLKTFPNLLSPPTRAI 407
Query: 360 WKTNGIVATLS-----NKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTP---MEEDA 410
K+N + KRK S D L +QPPLKK+ATDG + + +S+ +
Sbjct: 408 LKSNKKILPTKPKINPGKRKASTDNLMQQPPLKKLATDGSMGVMPINSLAVDKQGLTGGF 467
Query: 411 TAATPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKL 470
+ +T + +SD S S Q+ ++ S R R+ G ++A K SA+L Q WK D+N+G+L
Sbjct: 468 STSTAVGSSDVGLSSMSQ-QLASENISGGR--REVG-TRALKASAVLAQAWK-DVNAGQL 522
Query: 471 LVSLFELFGEGILSFIPAPEMSLFL 495
SLFE FGE + F P+PE+SLFL
Sbjct: 523 SASLFEYFGESMFCFTPSPELSLFL 547
>gi|326488229|dbj|BAJ93783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 547
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/506 (62%), Positives = 397/506 (78%), Gaps = 17/506 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH++RT LT DDVD AL LRNVEPVYGFASG LRF+RA+G++DLFY+DD++V+FK++I
Sbjct: 48 MRHAKRTVLTADDVDSALSLRNVEPVYGFASGDHLRFKRAVGHKDLFYIDDREVDFKEII 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQ--KDGLPVEIKLP 118
EAPLP+APLDT++V HWLAIEGVQP IPEN P+ AI+AP+ EQ DGLPV+IKLP
Sbjct: 108 EAPLPKAPLDTAVVAHWLAIEGVQPAIPENPPIDAISAPTENKRTEQVKDDGLPVDIKLP 167
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
VKHILSRELQ+YFDKI EL +SRS + +F++ALVSL+ DSGLHPLVPYF+YF+ADEV+R
Sbjct: 168 VKHILSRELQMYFDKIAELTMSRSSTPIFREALVSLSKDSGLHPLVPYFSYFIADEVTRS 227
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 238
L + +LFALMRVV +LL+NPHI IEPYLHQLMPS++TC+VAKRLG+RL+DNHWELRDF+
Sbjct: 228 LADLPVLFALMRVVQSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWELRDFS 287
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
A LVA++C+RYGHVY+ LQ RLTKTL++A LDP +ALTQHYGAVQG++ALGP+ +RLLLL
Sbjct: 288 ANLVASVCRRYGHVYHNLQIRLTKTLVHAFLDPHKALTQHYGAVQGISALGPSAIRLLLL 347
Query: 299 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARS 358
PNL Y+ LL+PE+ LEKQ NE+KR EAWRVYGALL AAG+C+Y+RLK+FP L R
Sbjct: 348 PNLQTYMQLLDPELQLEKQSNEMKRKEAWRVYGALLCAAGKCLYERLKLFPNLLCPSTRP 407
Query: 359 VWKTNGIVATLS-NKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL 416
+ ++N VAT + NKRK+S DL QPPLKK+A+D VS S M + A +
Sbjct: 408 LLRSNSRVATNNPNKRKSSTDLSASQPPLKKMASD-----VSMSPMGSAAPVAGNMAGSM 462
Query: 417 DNSDADHPSPSSVQIPPDSGSESRS-------KRDKGDSQAQKLSAILPQVWKDDLNSGK 469
D A P+P +Q SG + S +RD+G + AQ++SA+L Q WK+D ++G
Sbjct: 463 DGFSAQLPNPGMMQA-SSSGQKVESMTAAGAIRRDQGSNHAQRVSAVLRQAWKEDQDAGH 521
Query: 470 LLVSLFELFGEGILSFIPAPEMSLFL 495
LL SL E+FGE I SFI PE+S+FL
Sbjct: 522 LLGSLHEVFGEAIFSFIQPPELSIFL 547
>gi|357157836|ref|XP_003577929.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Brachypodium distachyon]
Length = 545
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/505 (61%), Positives = 401/505 (79%), Gaps = 17/505 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH++RT LT DDVD AL LRNVEPVYGFASG PLRF+RA+G++DLFY+DD++V+FK++I
Sbjct: 48 MRHAKRTVLTADDVDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYIDDREVDFKEII 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE--QKDGLPVEIKLP 118
EAPLP+APLDT++V HWLAIEGVQP IPEN P+ I AP+ E + DGLPV+IKLP
Sbjct: 108 EAPLPKAPLDTAVVAHWLAIEGVQPAIPENPPIDVILAPTESKRTEHVKDDGLPVDIKLP 167
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
VKHILSRELQ+YFDKI EL +SRS++ +F++ALVSL+ DSGLHPLVPYF+YF+ADEV+R
Sbjct: 168 VKHILSRELQMYFDKIAELTMSRSNTSVFREALVSLSKDSGLHPLVPYFSYFIADEVTRS 227
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 238
L + +LFALMRVV +LL+NPH+ IEPYLHQLMP ++TC+VAKRLG+RL+DNHWELRDF+
Sbjct: 228 LADLPVLFALMRVVQSLLRNPHVHIEPYLHQLMPPMITCIVAKRLGHRLSDNHWELRDFS 287
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
A LVA++C+RYGHVY+ LQ RLTKTL++A LDP +ALTQHYGAVQG++ALGP+ +RLLLL
Sbjct: 288 ANLVASVCRRYGHVYHNLQIRLTKTLIHAFLDPHKALTQHYGAVQGISALGPSAIRLLLL 347
Query: 299 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARS 358
PNL Y+ LLEPE+ LEKQKNE+KR EAWRVYGALL AAG+C+Y+RLK+FP L S R
Sbjct: 348 PNLETYMQLLEPELQLEKQKNEMKRKEAWRVYGALLCAAGKCLYERLKLFPGLLSPSTRP 407
Query: 359 VWKTNGIVAT-LSNKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL 416
+ ++N VAT SNKRK+S D QPPLKK+ATD +++++++ + T +
Sbjct: 408 LLRSNKRVATNNSNKRKSSTDHSASQPPLKKMATDVSMNSMASAPIV------GTMVGTM 461
Query: 417 DNSDADHPSPSSVQIPPDSGSESRS------KRDKGDSQAQKLSAILPQVWKDDLNSGKL 470
D A P+P +Q SG S +RD+G++ AQ++SA+L Q WK+D ++G L
Sbjct: 462 DGFSAQLPNPGMMQ-ALSSGQMVESITQVPIRRDQGNNHAQRVSAVLRQAWKEDQDAGHL 520
Query: 471 LVSLFELFGEGILSFIPAPEMSLFL 495
L SL+E+FGE I SFI PE+S+F+
Sbjct: 521 LESLYEVFGEAIFSFIQPPEISIFV 545
>gi|115436920|ref|NP_001043168.1| Os01g0510800 [Oryza sativa Japonica Group]
gi|20804496|dbj|BAB92191.1| putative TAF6 [Oryza sativa Japonica Group]
gi|113532699|dbj|BAF05082.1| Os01g0510800 [Oryza sativa Japonica Group]
gi|215768003|dbj|BAH00232.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618539|gb|EEE54671.1| hypothetical protein OsJ_01969 [Oryza sativa Japonica Group]
Length = 541
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/499 (60%), Positives = 396/499 (79%), Gaps = 9/499 (1%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH++RT LT DDVD AL LRNVEPVYGFASG PLRF+RA+G++DLFY+DD++V+FK++I
Sbjct: 48 MRHAKRTVLTADDVDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYIDDREVDFKEII 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE--QKDGLPVEIKLP 118
EAPLP+APLDT++V HWLAIEGVQP IPEN PV AI AP+ E + DGLPV+IKLP
Sbjct: 108 EAPLPKAPLDTAVVAHWLAIEGVQPAIPENPPVDAIVAPTENKRTEHGKDDGLPVDIKLP 167
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
VKH+LSRELQ+YFDKI EL +SRS++ +F++ALVSL+ DSGLHPLVPYF+YF+ADEV+R
Sbjct: 168 VKHVLSRELQMYFDKIAELTMSRSETSVFREALVSLSRDSGLHPLVPYFSYFIADEVTRS 227
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 238
L + +LFALMRVV +LL NPHI IEPYLHQLMPS++TC+VAKRLG+RL+DNHWELRDF+
Sbjct: 228 LGDLPVLFALMRVVQSLLHNPHIHIEPYLHQLMPSIITCMVAKRLGHRLSDNHWELRDFS 287
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
A LV ++C+R+GH Y+ +QTR+T+TL+ LDP+++LTQHYGA+QG++ALGP+ +RLLLL
Sbjct: 288 ANLVGSVCRRFGHAYHNIQTRVTRTLVQGFLDPQKSLTQHYGAIQGISALGPSAIRLLLL 347
Query: 299 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARS 358
PNL Y+ LLEPE+ L+KQKNE+KR EAWRVYGALL AAG+C+YDRLK+FP L S R
Sbjct: 348 PNLETYMQLLEPELQLDKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPNLLSPSTRP 407
Query: 359 VWKTNGIVATLS-NKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL 416
+ ++N V T + NKRK+S DL QPPLKK+ TDG +++++++ MP M+ +T L
Sbjct: 408 LLRSNKRVVTNNPNKRKSSTDLSTSQPPLKKMTTDGAMNSMTSAPMPGTMD---GFSTQL 464
Query: 417 DNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFE 476
N S S + +S + +RD+G + Q++S +L WK+D N+G LL SL+E
Sbjct: 465 PNPSMTQTSSSGQLV--ESTASGVIRRDQGSNHTQRVSTVLRLAWKEDQNAGHLLSSLYE 522
Query: 477 LFGEGILSFIPAPEMSLFL 495
+FGE I SF+ PE+S FL
Sbjct: 523 VFGEAIFSFVQPPEISFFL 541
>gi|218188315|gb|EEC70742.1| hypothetical protein OsI_02149 [Oryza sativa Indica Group]
Length = 501
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/499 (60%), Positives = 396/499 (79%), Gaps = 9/499 (1%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH++RT LT DDVD AL LRNVEPVYGFASG PLRF+RA+G++DLFY+DD++V+FK++I
Sbjct: 8 MRHAKRTVLTADDVDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYIDDREVDFKEII 67
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE--QKDGLPVEIKLP 118
EAPLP+APLDT++V HWLAIEGVQP IPEN PV AI AP+ E + DGLPV+IKLP
Sbjct: 68 EAPLPKAPLDTAVVAHWLAIEGVQPAIPENPPVDAIVAPTENKRTEHGKDDGLPVDIKLP 127
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
VKH+LSRELQ+YFDKI EL +SRS++ +F++ALVSL+ DSGLHPLVPYF+YF+ADEV+R
Sbjct: 128 VKHVLSRELQMYFDKIAELTMSRSETSVFREALVSLSRDSGLHPLVPYFSYFIADEVTRS 187
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 238
L + +LFALMRVV +LL NPHI IEPYLHQLMPS++TC+VAKRLG+RL+DNHWELRDF+
Sbjct: 188 LGDLPVLFALMRVVQSLLHNPHIHIEPYLHQLMPSIITCMVAKRLGHRLSDNHWELRDFS 247
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
A LV ++C+R+GH Y+ +QTR+T+TL+ LDP+++LTQHYGA+QG++ALGP+ +RLLLL
Sbjct: 248 ANLVGSVCRRFGHAYHNIQTRVTRTLVQGFLDPQKSLTQHYGAIQGISALGPSAIRLLLL 307
Query: 299 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARS 358
PNL Y+ LLEPE+ L+KQKNE+KR EAWRVYGALL AAG+C+YDRLK+FP L S R
Sbjct: 308 PNLETYMQLLEPELQLDKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPNLLSPSTRP 367
Query: 359 VWKTNGIVATLS-NKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL 416
+ ++N V T + NKRK+S DL QPPLKK+ TDG +++++++ MP M+ +T L
Sbjct: 368 LLRSNKRVVTNNPNKRKSSTDLSTSQPPLKKMTTDGAMNSMTSAPMPGTMD---GFSTQL 424
Query: 417 DNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFE 476
N S S + +S + +RD+G + Q++S +L WK+D N+G LL SL+E
Sbjct: 425 PNPSMTQTSSSGQLV--ESTASGVIRRDQGSNHTQRVSTVLRLAWKEDQNAGHLLSSLYE 482
Query: 477 LFGEGILSFIPAPEMSLFL 495
+FGE I SF+ PE+S FL
Sbjct: 483 VFGEAIFSFVQPPEISFFL 501
>gi|219887973|gb|ACL54361.1| unknown [Zea mays]
gi|413956299|gb|AFW88948.1| putative TATA binding protein family protein [Zea mays]
Length = 545
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 309/499 (61%), Positives = 394/499 (78%), Gaps = 5/499 (1%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH++RT LT DDVD AL LRNVEPVYGFASG PLRF+RA+G++DLFYLDD++V+FK++I
Sbjct: 48 MRHAKRTVLTADDVDSALGLRNVEPVYGFASGDPLRFKRAVGHKDLFYLDDREVDFKEII 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE--QKDGLPVEIKLP 118
+ PLP+APLDTS+V HWLAIEGVQP IPEN + AI P+ +E + DGLP ++KLP
Sbjct: 108 DCPLPKAPLDTSVVAHWLAIEGVQPAIPENPAIDAIVPPTENKRSEHGKDDGLPADVKLP 167
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
VKH+LSRELQ+YFDKI EL +SRSD+ LFK+ALVSLA DSGLHPLVPYF+YF+ADEV+R
Sbjct: 168 VKHVLSRELQMYFDKIAELTMSRSDTSLFKEALVSLAKDSGLHPLVPYFSYFIADEVTRS 227
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 238
L + +L ALMRVV +LL+NPHI IEPYLHQLMPS++TC+VAKRLG+RL+DNHWELRDF+
Sbjct: 228 LGDLPVLLALMRVVQSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWELRDFS 287
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
A LVA +C+R+GHVY+ LQ RLTKTL++A LDP ++LTQHYGAVQG++ALGP+ +RLLLL
Sbjct: 288 ANLVALVCQRFGHVYHNLQNRLTKTLIHAFLDPAKSLTQHYGAVQGISALGPSAIRLLLL 347
Query: 299 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARS 358
PNL Y+ LLEPE+ LEKQKNE+KR EAWRVYGALL AAG+C+YDRLK+FP L S R
Sbjct: 348 PNLVTYMQLLEPELQLEKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPGLLSPSMRP 407
Query: 359 VWKTNGIVATLS-NKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL 416
+ ++N V T + NKRK+S DL QPPLKK+ATD ++++++SM M + A P
Sbjct: 408 LLQSNKRVLTNNPNKRKSSTDLSATQPPLKKMATDATANSMASASMGGNM-QGAMDGFPN 466
Query: 417 DNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFE 476
+ SS +S + +RD+G AQ++SA+L Q WK+D ++G LL SL+E
Sbjct: 467 QLGNPGMMQASSSGQTVESIPSAAVRRDQGSDLAQRVSAVLRQAWKEDQDTGHLLGSLYE 526
Query: 477 LFGEGILSFIPAPEMSLFL 495
+FGE I SF+ PE+SLF+
Sbjct: 527 VFGEAIFSFVQPPEISLFV 545
>gi|222424297|dbj|BAH20105.1| AT1G04950 [Arabidopsis thaliana]
Length = 549
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 331/505 (65%), Positives = 398/505 (78%), Gaps = 13/505 (2%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RTTLT DVD AL LRNVEP+YGFASGGP RFR+AIG+RDLFY DD++V+FKDVI
Sbjct: 48 MRHSKRTTLTASDVDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVI 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
EAPLP+APLDT IVCHWLAIEGVQP IPENAP++ I AP+ +EQKDG ++++LPVK
Sbjct: 108 EAPLPKAPLDTEIVCHWLAIEGVQPAIPENAPLEVIRAPAETKIHEQKDGPLIDVRLPVK 167
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
H+LSRELQLYF KI ELA+S+S+ L+K+ALVSLA+DSGLHPLVPYFT F+ADEVS GLN
Sbjct: 168 HVLSRELQLYFQKIAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGLN 227
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
++ LLF LM +V +LLQNPHI IEPYLHQLMPSVVTCLV+++LGNR ADNHWELRDF A
Sbjct: 228 DFRLLFNLMHIVVSLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFAAN 287
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
LV+ ICKRYG VY TLQ+RLT+TL+NALLDPK+ALTQHYGA+QGLAALG VVRLL+L N
Sbjct: 288 LVSLICKRYGTVYITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSN 347
Query: 301 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 360
L PYLSLLEPE+ EKQKN++K +EAWRVYGALL+AAG CI+ RLKIFPPL S +
Sbjct: 348 LEPYLSLLEPELNAEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPSFLH 407
Query: 361 KTNG---IVATLSNKRKTSMD-LEEQPPLKKIAT-DGPVDAVST--SSMPTPMEEDATAA 413
K G I++T +KRK S+D E Q P K++ T DGP D V + S PM+ D
Sbjct: 408 KGKGKGKIISTDPHKRKLSVDSSENQSPQKRLITMDGP-DGVHSQDQSGSAPMQVDNPVE 466
Query: 414 TPLDNSDADHPSPSSVQIPPDSG-SESRSKRDK--GDSQAQKLSAILPQVWKDDLNSGKL 470
DN + PSS + D+ SESR+ + K G S+A + AIL Q+WKDDL+SG+L
Sbjct: 467 N--DNPPQNSVQPSSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRL 524
Query: 471 LVSLFELFGEGILSFIPAPEMSLFL 495
LV L EL+G+ IL FIP+ EMS+FL
Sbjct: 525 LVKLHELYGDRILPFIPSTEMSVFL 549
>gi|15220358|ref|NP_171987.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
gi|30679057|ref|NP_849592.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
gi|79316742|ref|NP_001030969.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
gi|7211972|gb|AAF40443.1|AC004809_1 Strong similarity to the TATA binding protein-associated factor
from A. thaliana gb|Y13673. ESTs gb|N38153 and gb|W43450
come from this gene [Arabidopsis thaliana]
gi|15293057|gb|AAK93639.1| putative TATA binding protein-associated factor [Arabidopsis
thaliana]
gi|20259031|gb|AAM14231.1| putative TATA binding protein-associated factor [Arabidopsis
thaliana]
gi|39545920|gb|AAR28023.1| TAF6 [Arabidopsis thaliana]
gi|332189645|gb|AEE27766.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
gi|332189646|gb|AEE27767.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
gi|332189647|gb|AEE27768.1| transcription initiation factor TFIID subunit D5 [Arabidopsis
thaliana]
Length = 549
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 331/505 (65%), Positives = 398/505 (78%), Gaps = 13/505 (2%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RTTLT DVD AL LRNVEP+YGFASGGP RFR+AIG+RDLFY DD++V+FKDVI
Sbjct: 48 MRHSKRTTLTASDVDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVI 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
EAPLP+APLDT IVCHWLAIEGVQP IPENAP++ I AP+ +EQKDG ++++LPVK
Sbjct: 108 EAPLPKAPLDTEIVCHWLAIEGVQPAIPENAPLEVIRAPAETKIHEQKDGPLIDVRLPVK 167
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
H+LSRELQLYF KI ELA+S+S+ L+K+ALVSLA+DSGLHPLVPYFT F+ADEVS GLN
Sbjct: 168 HVLSRELQLYFQKIAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGLN 227
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
++ LLF LM +V +LLQNPHI IEPYLHQLMPSVVTCLV+++LGNR ADNHWELRDF A
Sbjct: 228 DFRLLFNLMHIVRSLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFAAN 287
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
LV+ ICKRYG VY TLQ+RLT+TL+NALLDPK+ALTQHYGA+QGLAALG VVRLL+L N
Sbjct: 288 LVSLICKRYGTVYITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSN 347
Query: 301 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 360
L PYLSLLEPE+ EKQKN++K +EAWRVYGALL+AAG CI+ RLKIFPPL S +
Sbjct: 348 LEPYLSLLEPELNAEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPSFLH 407
Query: 361 KTNG---IVATLSNKRKTSMD-LEEQPPLKKIAT-DGPVDAVST--SSMPTPMEEDATAA 413
K G I++T +KRK S+D E Q P K++ T DGP D V + S PM+ D
Sbjct: 408 KGKGKGKIISTDPHKRKLSVDSSENQSPQKRLITMDGP-DGVHSQDQSGSAPMQVDNPVE 466
Query: 414 TPLDNSDADHPSPSSVQIPPDSG-SESRSKRDK--GDSQAQKLSAILPQVWKDDLNSGKL 470
DN + PSS + D+ SESR+ + K G S+A + AIL Q+WKDDL+SG+L
Sbjct: 467 N--DNPPQNSVQPSSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRL 524
Query: 471 LVSLFELFGEGILSFIPAPEMSLFL 495
LV L EL+G+ IL FIP+ EMS+FL
Sbjct: 525 LVKLHELYGDRILPFIPSTEMSVFL 549
>gi|222423929|dbj|BAH19928.1| AT1G04950 [Arabidopsis thaliana]
Length = 549
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 330/505 (65%), Positives = 397/505 (78%), Gaps = 13/505 (2%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RTTLT DVD AL LRNVEP+YGFASGGP RFR+AIG+RDLFY DD++V+FKDVI
Sbjct: 48 MRHSKRTTLTASDVDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVI 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
EAPLP+APLDT IVCHWLAIEGVQP IPENAP++ I AP+ +EQKDG ++++LPVK
Sbjct: 108 EAPLPKAPLDTEIVCHWLAIEGVQPAIPENAPLEVIRAPAETKIHEQKDGPLIDVRLPVK 167
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
H+LSRELQLYF KI ELA+S+S+ L+K+ALVSLA+DSGLHPLVPYFT F+ADEVS GLN
Sbjct: 168 HVLSRELQLYFQKIAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNGLN 227
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
++ LLF LM +V +LLQNPHI IEPYLHQLMPSVVTCLV+++LGNR ADNHWELRDF A
Sbjct: 228 DFRLLFNLMHIVRSLLQNPHIHIEPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDFAAN 287
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
LV+ ICKRYG VY TLQ+RLT+TL+NALLDPK+ALTQHYGA+QGLAALG VVRLL+L N
Sbjct: 288 LVSLICKRYGTVYITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLILSN 347
Query: 301 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 360
L PYLSLLEPE+ EKQKN++K +EAWRVYGALL+ AG CI+ RLKIFPPL S +
Sbjct: 348 LEPYLSLLEPELNAEKQKNQMKIYEAWRVYGALLRVAGLCIHGRLKIFPPLPSPSPSFLH 407
Query: 361 KTNG---IVATLSNKRKTSMD-LEEQPPLKKIAT-DGPVDAVST--SSMPTPMEEDATAA 413
K G I++T +KRK S+D E Q P K++ T DGP D V + S PM+ D
Sbjct: 408 KGKGKGKIISTDPHKRKLSVDSSENQSPQKRLITMDGP-DGVHSQDQSGSAPMQVDNPVE 466
Query: 414 TPLDNSDADHPSPSSVQIPPDSG-SESRSKRDK--GDSQAQKLSAILPQVWKDDLNSGKL 470
DN + PSS + D+ SESR+ + K G S+A + AIL Q+WKDDL+SG+L
Sbjct: 467 N--DNPPQNSVQPSSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSGRL 524
Query: 471 LVSLFELFGEGILSFIPAPEMSLFL 495
LV L EL+G+ IL FIP+ EMS+FL
Sbjct: 525 LVKLHELYGDRILPFIPSTEMSVFL 549
>gi|297848746|ref|XP_002892254.1| TAFII59 [Arabidopsis lyrata subsp. lyrata]
gi|297338096|gb|EFH68513.1| TAFII59 [Arabidopsis lyrata subsp. lyrata]
Length = 554
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 330/510 (64%), Positives = 398/510 (78%), Gaps = 18/510 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RTTLT DVD AL LRNVEP+YGFASGGP RFR+AIG+RDLFY DD++V+FKDVI
Sbjct: 48 MRHSKRTTLTASDVDGALNLRNVEPIYGFASGGPFRFRKAIGHRDLFYTDDREVDFKDVI 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
EAPLP+APLDT IVCHWLAIEGVQP IPENAP++ I AP+ +EQKDG P++++LPVK
Sbjct: 108 EAPLPKAPLDTEIVCHWLAIEGVQPAIPENAPLEVIRAPAENKIHEQKDGPPIDVRLPVK 167
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADE------ 174
H+LSRELQLYF KI ELA+S+S+ LFK+ALVSLA+DSGLHPLVPYFT F+ADE
Sbjct: 168 HVLSRELQLYFQKIAELAMSKSNPALFKEALVSLASDSGLHPLVPYFTNFIADEVTLCTT 227
Query: 175 -VSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE 233
VS GL ++ LLF LM +V +LLQNPHI IEPYL+QLMPSVVTCLV+++LGNR ADNHWE
Sbjct: 228 KVSNGLKDFRLLFNLMHIVRSLLQNPHINIEPYLYQLMPSVVTCLVSRKLGNRFADNHWE 287
Query: 234 LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVV 293
LRDF + LVA ICKRYG VY TLQ+RLT+TL+NALLDPK+ALTQHYGA++GLAALG NVV
Sbjct: 288 LRDFASNLVALICKRYGPVYITLQSRLTRTLVNALLDPKKALTQHYGAIRGLAALGHNVV 347
Query: 294 RLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSS 353
RLL+L NL PYLSLLEPE+ EKQKN++K +EAW VYGALL+AAG CI+DRLKIFPPL S
Sbjct: 348 RLLILSNLEPYLSLLEPELDAEKQKNQMKNYEAWCVYGALLRAAGLCIHDRLKIFPPLPS 407
Query: 354 LPARSVWKTNG-IVATLSNKRKTSMD-LEEQPPLKKIAT-DGPVDAVST--SSMPTPMEE 408
+ K G I+ T +KRK S+D E Q P K++ T DGP D V + S PM+
Sbjct: 408 PSPSFLRKGKGKIINTDPHKRKLSIDSSENQSPQKRLITMDGP-DGVQSQDQSGSAPMQV 466
Query: 409 DATAATPLDNSDADHPSPSSVQIPPDSG-SESRSKRDK--GDSQAQKLSAILPQVWKDDL 465
D DN + PSS + D+ SESR+ + K G S+A + AIL Q+WKDDL
Sbjct: 467 DNPVEN--DNPPQNSIQPSSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDL 524
Query: 466 NSGKLLVSLFELFGEGILSFIPAPEMSLFL 495
+SG+LLV L EL+G+ +L FIP+ EMS+FL
Sbjct: 525 DSGRLLVKLHELYGDRVLPFIPSTEMSVFL 554
>gi|449523135|ref|XP_004168580.1| PREDICTED: transcription initiation factor TFIID subunit 6-like,
partial [Cucumis sativus]
Length = 439
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 305/440 (69%), Positives = 356/440 (80%), Gaps = 4/440 (0%)
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLP 118
VI+APLP+APLD ++ CHWLAIEGVQP IPENAPV+ I PS+ ++EQKD +PV+IKLP
Sbjct: 1 VIDAPLPKAPLDAAVFCHWLAIEGVQPAIPENAPVEVILPPSDTKSSEQKDEVPVDIKLP 60
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
VKHILS+ELQLYFDKITEL VSRS + LFK+ALVSLATDSGLHPLVPYFT ++ADEV+RG
Sbjct: 61 VKHILSKELQLYFDKITELVVSRSSTDLFKKALVSLATDSGLHPLVPYFTCYIADEVARG 120
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 238
L +YSLLFALMRVVW+LLQNPHI IEPYLHQ+MPSVVTCLVAKRLG+R +DNHWELRDFT
Sbjct: 121 LGDYSLLFALMRVVWSLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGSRFSDNHWELRDFT 180
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
AK+VA ICKR+GHVYNTLQT+LTKTLLNA LDPKR+LTQHYGA++GLAALG NVV LL+L
Sbjct: 181 AKVVALICKRFGHVYNTLQTKLTKTLLNAFLDPKRSLTQHYGAIRGLAALGMNVVHLLIL 240
Query: 299 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARS 358
PNL PYL LLEPEMLL QKNE+KRHEAW VYGALL+A GQCIY+R+KIFPPL S PA S
Sbjct: 241 PNLEPYLGLLEPEMLLANQKNEMKRHEAWHVYGALLRAVGQCIYERIKIFPPLLSTPAGS 300
Query: 359 VWKTNG--IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATP 415
V +TN I T NKRK + D LE QPPLK+++ DGP+ + T+S + ME A
Sbjct: 301 VLRTNARTITTTFPNKRKANADYLEGQPPLKRMSIDGPMGVMLTNSSASHMEGTVVPAAS 360
Query: 416 LDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLF 475
NS+ P+ S S S S++ K D Q K SA+L QVWK+DLNSGKLL S+
Sbjct: 361 -GNSNLVSPTSSGQMQNEAISSGSTSRKGKHDDQILKKSAVLSQVWKEDLNSGKLLTSML 419
Query: 476 ELFGEGILSFIPAPEMSLFL 495
+LFGE + FIPAPE+SLFL
Sbjct: 420 DLFGESMFCFIPAPELSLFL 439
>gi|224056415|ref|XP_002298845.1| predicted protein [Populus trichocarpa]
gi|222846103|gb|EEE83650.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 312/503 (62%), Positives = 382/503 (75%), Gaps = 31/503 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGG---PLRFRRAI--GYRDLFYLDDKDVE 55
MRHSRRT LT DVD AL LRNVEP+YGF SGG PLRF+RA G++DL+Y+DDKDV
Sbjct: 50 MRHSRRTALTAHDVDTALILRNVEPIYGFGSGGDKVPLRFKRAAAAGHKDLYYIDDKDVN 109
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD-GLPVE 114
FK VIEAP P+ PLDTS+ HWLAIEGVQP IPEN P++ I S+G ++ KD GL ++
Sbjct: 110 FKHVIEAPPPKPPLDTSLTSHWLAIEGVQPAIPENVPIEVI---SDGKKSDYKDDGLSID 166
Query: 115 IKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADE 174
+KLPVK ILSRELQLYF+K+TEL RS+S +FKQALVSLATDSGLHPLVPYF F+ADE
Sbjct: 167 VKLPVKDILSRELQLYFEKVTELTARRSESAIFKQALVSLATDSGLHPLVPYFIQFIADE 226
Query: 175 VSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWEL 234
VSR LNN+SLL A+MR+ +LLQNP+I IEPYLHQLMPS++TCLVAKRLGNR +DNHWEL
Sbjct: 227 VSRNLNNFSLLLAVMRIARSLLQNPYIHIEPYLHQLMPSIITCLVAKRLGNRFSDNHWEL 286
Query: 235 RDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVR 294
R+FTA LVA+ICKR+GH Y+ LQ R+ +TL++A LDP ++L QHYG++QGLAALGP+VVR
Sbjct: 287 RNFTANLVASICKRFGHAYHNLQPRIIRTLVHAFLDPTKSLPQHYGSIQGLAALGPSVVR 346
Query: 295 LLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSL 354
LL+LPNL PYL LLE EMLLEKQKNE+KRHEAW+VYGAL +AAG C+YDRLK+ P L
Sbjct: 347 LLILPNLEPYLLLLEQEMLLEKQKNEIKRHEAWQVYGALTRAAGLCMYDRLKMLPGLFIP 406
Query: 355 PARSVWKTNGIVAT-LSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATA 412
P+R++WK+NG V T + NKRK S D L +QP LKKIATD + A+ +SMP M+ AT
Sbjct: 407 PSRAIWKSNGRVMTAMPNKRKASTDNLMQQPLLKKIATDSAIGAMPMNSMPVEMQGAATI 466
Query: 413 ATPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLV 472
+ L N + +P R + + K S +L Q WK+D+++G LL
Sbjct: 467 SRQLSNEN----------VP----------RREISGRGLKTSTVLAQAWKEDMDAGHLLA 506
Query: 473 SLFELFGEGILSFIPAPEMSLFL 495
SLFELF E + SF P PE+S FL
Sbjct: 507 SLFELFSESMFSFTPKPELSFFL 529
>gi|255580776|ref|XP_002531209.1| transcription initiation factor tfiid, putative [Ricinus communis]
gi|223529211|gb|EEF31186.1| transcription initiation factor tfiid, putative [Ricinus communis]
Length = 468
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 303/476 (63%), Positives = 372/476 (78%), Gaps = 11/476 (2%)
Query: 23 VEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEG 82
++PVYG ASG PLRF+RA GY+DL+Y+DDKDVEFKDV+EAPLP+APLDTSI HWLAIEG
Sbjct: 1 MQPVYGLASGDPLRFKRAAGYKDLYYIDDKDVEFKDVVEAPLPKAPLDTSISVHWLAIEG 60
Query: 83 VQPVIPENAPVQAIAAPSNGTNNEQK-DGLPVEIKLPVKHILSRELQLYFDKITELAVSR 141
VQP IPENAPV+A S+G +E K DGLPV++KLPVKH+LSRELQLYFDKITEL + +
Sbjct: 61 VQPAIPENAPVEA---SSDGKKSEYKEDGLPVDVKLPVKHVLSRELQLYFDKITELTMRK 117
Query: 142 SDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHI 201
SDS+LFKQAL SLATDSGLHPLVPYF Y +ADEV+R LNN+S+LFALMRV +LLQNPHI
Sbjct: 118 SDSILFKQALSSLATDSGLHPLVPYFIYLIADEVARNLNNFSVLFALMRVARSLLQNPHI 177
Query: 202 QIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+EPYLHQLMPS++TCLVAKR GNR DNH ELRDFTA LVA+ICKR+GHVY+ LQ R+T
Sbjct: 178 HVEPYLHQLMPSIITCLVAKRSGNRFCDNHLELRDFTANLVASICKRFGHVYHNLQPRVT 237
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEV 321
+TLL+ LDP ++L QHYGA+QGLAALGPNVVRLL+LPNL PYL LLEPEMLLEKQKNE+
Sbjct: 238 RTLLHTFLDPLKSLPQHYGAIQGLAALGPNVVRLLILPNLEPYLLLLEPEMLLEKQKNEM 297
Query: 322 KRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSNKRKTSMD-L 379
+RHEAW VYGAL++AAG C++DR+K P + P R+VWK++G ++ T+ NKRK S D L
Sbjct: 298 RRHEAWSVYGALMRAAGLCMHDRMKRLPGVLMPPTRAVWKSSGRLMTTVPNKRKASSDNL 357
Query: 380 EEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSES 439
+QPPLKK+ATDGP+ + +SM M+ + S S Q+P +E+
Sbjct: 358 IQQPPLKKLATDGPMGVIPMNSMHVDMQGATGGYHTASGASGMSISSMSRQLP----NEN 413
Query: 440 RSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMSLFL 495
RD + K+ +L + WK+D+++G LL SL ELFGE + F P PE+S FL
Sbjct: 414 MPGRDI-SGRVSKVLPVLARAWKEDMDAGHLLASLNELFGESMSCFAPKPELSFFL 468
>gi|356567236|ref|XP_003551827.1| PREDICTED: uncharacterized protein LOC100803416 [Glycine max]
Length = 440
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 281/403 (69%), Positives = 323/403 (80%), Gaps = 8/403 (1%)
Query: 96 IAAPSNGTNNEQKD-GLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSL 154
I+APS+ +EQKD LPV+IKLPVKH+LSRELQLYFDK+ EL +S S+SVLFK+ALVSL
Sbjct: 43 ISAPSDVKKHEQKDDNLPVDIKLPVKHVLSRELQLYFDKVAELTLSESESVLFKEALVSL 102
Query: 155 ATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
ATDSGLHPLVPYFT F+ADEVSRGLNNY LLFALMRVV +LLQNPHI IEPYLHQLMPSV
Sbjct: 103 ATDSGLHPLVPYFTCFIADEVSRGLNNYPLLFALMRVVSSLLQNPHIHIEPYLHQLMPSV 162
Query: 215 VTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA 274
VTCLVAKRLG+RLADNHWELRD TA LVA+ICKR+GHVY+ LQ+RLTKTLLNA LDPK+A
Sbjct: 163 VTCLVAKRLGSRLADNHWELRDSTANLVASICKRFGHVYSNLQSRLTKTLLNAFLDPKKA 222
Query: 275 LTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 334
LTQHYGA+QGL ALGPNVVRLLLLPNL Y+ LLEPEMLLE QKNE+KRHEAW VYGALL
Sbjct: 223 LTQHYGAIQGLGALGPNVVRLLLLPNLETYMRLLEPEMLLEMQKNEMKRHEAWLVYGALL 282
Query: 335 QAAGQCIYDRLKIFPPLSSLPARSVWKTNG--IVATLSNKRKTSMDLEEQPPLKKIATDG 392
+AAGQCIYDRLKIFP S P +VWKTN + +TL ++ + LE+QPPLKK ATDG
Sbjct: 283 RAAGQCIYDRLKIFPTFPSPPLHAVWKTNAKVLTSTLDKRKASPEQLEQQPPLKKAATDG 342
Query: 393 PVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQK 452
+ M EE T A+ D+ S S+ Q+ ++ + + + GD+QA K
Sbjct: 343 ---EIGVDLMNHEQEEAGTQASSADSIIGS--SSSNTQMKNETTLDGEVRSNGGDTQALK 397
Query: 453 LSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMSLFL 495
SA L QVWKD+LNSG+ LVSLFELFGEGILSFI APEM +FL
Sbjct: 398 TSAALTQVWKDELNSGRTLVSLFELFGEGILSFIQAPEMYMFL 440
>gi|413956298|gb|AFW88947.1| putative TATA binding protein family protein [Zea mays]
Length = 423
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 256/370 (69%), Positives = 315/370 (85%), Gaps = 2/370 (0%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH++RT LT DDVD AL LRNVEPVYGFASG PLRF+RA+G++DLFYLDD++V+FK++I
Sbjct: 48 MRHAKRTVLTADDVDSALGLRNVEPVYGFASGDPLRFKRAVGHKDLFYLDDREVDFKEII 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE--QKDGLPVEIKLP 118
+ PLP+APLDTS+V HWLAIEGVQP IPEN + AI P+ +E + DGLP ++KLP
Sbjct: 108 DCPLPKAPLDTSVVAHWLAIEGVQPAIPENPAIDAIVPPTENKRSEHGKDDGLPADVKLP 167
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
VKH+LSRELQ+YFDKI EL +SRSD+ LFK+ALVSLA DSGLHPLVPYF+YF+ADEV+R
Sbjct: 168 VKHVLSRELQMYFDKIAELTMSRSDTSLFKEALVSLAKDSGLHPLVPYFSYFIADEVTRS 227
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 238
L + +L ALMRVV +LL+NPHI IEPYLHQLMPS++TC+VAKRLG+RL+DNHWELRDF+
Sbjct: 228 LGDLPVLLALMRVVQSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWELRDFS 287
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
A LVA +C+R+GHVY+ LQ RLTKTL++A LDP ++LTQHYGAVQG++ALGP+ +RLLLL
Sbjct: 288 ANLVALVCQRFGHVYHNLQNRLTKTLIHAFLDPAKSLTQHYGAVQGISALGPSAIRLLLL 347
Query: 299 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARS 358
PNL Y+ LLEPE+ LEKQKNE+KR EAWRVYGALL AAG+C+YDRLK+FP L S R
Sbjct: 348 PNLVTYMQLLEPELQLEKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPGLLSPSMRP 407
Query: 359 VWKTNGIVAT 368
+ ++N V T
Sbjct: 408 LLQSNKRVLT 417
>gi|2196466|emb|CAA74021.1| TATA binding protein-associated factor [Arabidopsis thaliana]
Length = 527
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 300/480 (62%), Positives = 361/480 (75%), Gaps = 15/480 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLR-NVEPVYGFA-SGGPLRFRRAIGYRDLFYLDDKDVEFKD 58
M HS+RTTLT DVD A +L+ NVEP+YGF FR+AIG+RDLFY DD++V+FKD
Sbjct: 48 MLHSKRTTLTASDVDGASQLKGNVEPIYGFGLRRAIFGFRKAIGHRDLFYTDDREVDFKD 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLP 118
VIEAPLP+APLDT IVCHWLAIEGVQP IPENAP++ I AP N K ++++LP
Sbjct: 108 VIEAPLPKAPLDTEIVCHWLAIEGVQPAIPENAPLEVIRAPGRNQNPVTKRRPLIDVRLP 167
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
VKH+LSRELQLYF KI ELA+S+S+ L+K+ALVSLA+DSGLHPLVPYFT F+ADEVS G
Sbjct: 168 VKHVLSRELQLYFQKIAELAMSKSNPPLYKEALVSLASDSGLHPLVPYFTNFIADEVSNG 227
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 238
LN++ LLF LM +V +LLQNPHI EPYLHQLMPSVVTCLV+++LGNR ADNHWELRD
Sbjct: 228 LNDFRLLFNLMHIVRSLLQNPHIHREPYLHQLMPSVVTCLVSRKLGNRFADNHWELRDLA 287
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
A LV+ ICKRYG VY TLQ+RLT+TL+NALLDPK+ALTQHYGA+QGLAALG VVRLL+L
Sbjct: 288 ANLVSLICKRYGTVYITLQSRLTRTLVNALLDPKKALTQHYGAIQGLAALGHTVVRLLIL 347
Query: 299 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARS 358
NL PYLSLLEPE EKQKN++K +EAWRVYGALL+AAG CI+ RLKIFPPL S
Sbjct: 348 SNLEPYLSLLEPEFNAEKQKNQMKIYEAWRVYGALLRAAGLCIHGRLKIFPPLPSPSPSF 407
Query: 359 VWKTNG---IVATLSNKRKTSMD-LEEQPPLKKIAT-DGPVDAVST--SSMPTPMEEDAT 411
+ K G I++T +KRK S+D E Q P K++ T DGP D V + S PM+ D
Sbjct: 408 LHKGKGKGKIISTDPHKRKLSVDSSENQSPQKRLITMDGP-DGVHSQDQSGSAPMQVDNP 466
Query: 412 AATPLDNSDADHPSPSSVQIPPDSG-SESRSKRDK--GDSQAQKLSAILPQVWKDDLNSG 468
DN + PSS + D+ SESR+ + K G S+A + AIL Q+WKDDL+SG
Sbjct: 467 VEN--DNPPQNSVQPSSSEQASDANESESRNGKVKESGRSRAITMKAILDQIWKDDLDSG 524
>gi|356567052|ref|XP_003551737.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Glycine max]
Length = 543
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 283/504 (56%), Positives = 375/504 (74%), Gaps = 17/504 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RT LTT+DVD AL LRN+EP+YGF S P RF+RA G++DLFY+DDKDV+ KD++
Sbjct: 48 MRHSKRTFLTTEDVDTALALRNLEPIYGFTSNDPPRFKRAAGHKDLFYIDDKDVDIKDIV 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---AAPSNGTNNE-QKDGLPVEIK 116
EAPLP+APLDTSI HWLAIEGVQP IPENAPV+ I PS +E ++DGLPV++K
Sbjct: 108 EAPLPKAPLDTSITSHWLAIEGVQPAIPENAPVEGIFPDLTPSEIRKSEFKEDGLPVDVK 167
Query: 117 LPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVS 176
LPVKH+++RELQLY++KIT+L + + S+ F++ALVSL+ DSGLHPLVPYFT+FVADEV+
Sbjct: 168 LPVKHLITRELQLYYEKITDLTLKKPGSIPFRRALVSLSADSGLHPLVPYFTFFVADEVA 227
Query: 177 RGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRD 236
R LNN ++LFALMR+V +LLQN I IE YLHQLMP ++TC+VAKR+GNRL+D HWELR+
Sbjct: 228 RNLNNLAVLFALMRLVRSLLQNSQIHIELYLHQLMPPIITCIVAKRIGNRLSDEHWELRN 287
Query: 237 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 296
F+A LV +IC+R+GH+Y+ LQ R+ KT L++ LDP +AL QHYGA++G+ ALG ++RLL
Sbjct: 288 FSANLVTSICQRFGHIYHNLQPRVMKTFLHSFLDPTKALPQHYGAIKGIEALGSRLIRLL 347
Query: 297 LLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPA 356
+LPNL PYL LLEPEM EKQ+NE+KRHEAW+VYGALL AAGQC+++++K F L S P
Sbjct: 348 ILPNLEPYLHLLEPEMQPEKQENEMKRHEAWQVYGALLGAAGQCVHEKVKTFGNLFSPPT 407
Query: 357 RSVWKTNG-IVATLSNKRKTS----MDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDAT 411
+ + +G V + KRK S M ++ PP+KK+ TDG AV +SM M+
Sbjct: 408 QVTSRGSGKSVIAMPGKRKASTVNLMQQQQLPPMKKLVTDGTGGAVPMNSMSVDMQGSTG 467
Query: 412 AATPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLL 471
+ + + + QI D + RD GD Q +K+S+ L Q WKDD+++G L+
Sbjct: 468 GYSSMMGVSS---MSMARQISND----NVPGRDIGDQQ-RKVSSTLAQAWKDDIDAGNLV 519
Query: 472 VSLFELFGEGILSFIPAPEMSLFL 495
S+ ELFGE +L F+P PE +FL
Sbjct: 520 SSVVELFGESVLPFVPNPEAYMFL 543
>gi|168019548|ref|XP_001762306.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686384|gb|EDQ72773.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 525
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 272/497 (54%), Positives = 357/497 (71%), Gaps = 21/497 (4%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+R+ LTTDDV+ AL LRNVEP+YGFASG PLRFRRA+G+ DLFY++D+D+EFK+V+
Sbjct: 48 MRHSKRSILTTDDVNSALSLRNVEPLYGFASGDPLRFRRALGHSDLFYVEDRDLEFKEVV 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNN--EQKDGLPVEIKLP 118
EAPLP+APLD S+V HWLA+EGVQP IPENAP++ +A P+ + D +++K P
Sbjct: 108 EAPLPKAPLDASVVAHWLAVEGVQPAIPENAPIEVLAPPTETKKEGPRKDDESAIDVKPP 167
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
VKH+LS+ELQLYF+K+TEL V+ +D+ L + ALVSLATDSGLHPLVPYFT FVADEV+R
Sbjct: 168 VKHVLSKELQLYFEKMTELVVTGADTQLLRDALVSLATDSGLHPLVPYFTQFVADEVTRS 227
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 238
L+++ LLF+LMR+V +LL NPHI IEPYLHQ+MPSV+TCLVAKRLG + NHWELRDFT
Sbjct: 228 LDDFPLLFSLMRLVQSLLLNPHIHIEPYLHQMMPSVITCLVAKRLGGKGIVNHWELRDFT 287
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
A LVA ICKR+GHVY+ LQ R+T+TLL+A LDPK+ALTQHYGA++GLAALG VVRL++L
Sbjct: 288 ASLVAFICKRFGHVYHNLQGRVTRTLLHAFLDPKKALTQHYGAIRGLAALGSRVVRLVVL 347
Query: 299 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARS 358
PNL YL LL PE+ E Q+NE+KR+EAWRVYGAL A+G C+Y++LK L +R
Sbjct: 348 PNLELYLRLLAPELSPETQQNEMKRYEAWRVYGALQTASGACMYEKLKAQSFLLPSSSRV 407
Query: 359 VWKTNGIVATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDN 418
K+ VAT + K ++S+ P +KK+ G + ++ + + L
Sbjct: 408 ALKSTARVATTNGKLRSSI-----PKMKKVYYGGHLKTEASGNCDGYFTKKKDRCGGLGA 462
Query: 419 SDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELF 478
+ ++ S Q + G + R R+ WK+D + G LL SL +LF
Sbjct: 463 ASSEKTSLRHRQFDSNRGKKFRWSREHS--------------WKEDGDVGPLLASLVDLF 508
Query: 479 GEGILSFIPAPEMSLFL 495
GEG+L FIP+ E+S F+
Sbjct: 509 GEGMLPFIPSKELSSFI 525
>gi|242044226|ref|XP_002459984.1| hypothetical protein SORBIDRAFT_02g020250 [Sorghum bicolor]
gi|241923361|gb|EER96505.1| hypothetical protein SORBIDRAFT_02g020250 [Sorghum bicolor]
Length = 446
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/446 (60%), Positives = 348/446 (78%), Gaps = 5/446 (1%)
Query: 54 VEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE--QKDGL 111
V +IEAPLP+APLDTS+V HWLAIEGVQP IPEN + AI P+ +E + DGL
Sbjct: 2 VGVMQIIEAPLPKAPLDTSVVAHWLAIEGVQPAIPENPAIDAIVPPTENKRSEHGKDDGL 61
Query: 112 PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFV 171
PV+IKLPVKH+LSRELQ+YFDKI EL +SRSD+ LFK+ALVSLA DSGLHPLVPYF+YF+
Sbjct: 62 PVDIKLPVKHVLSRELQMYFDKIAELTMSRSDTSLFKEALVSLAKDSGLHPLVPYFSYFI 121
Query: 172 ADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNH 231
ADEV+R L + +LFALMRVV +LL+NPHI IEPYLHQLMPS++TC+VAKRLG+RL+DNH
Sbjct: 122 ADEVTRSLGDLPVLFALMRVVQSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNH 181
Query: 232 WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPN 291
WELRDF+A LVA++C+R+GHVY+ LQ RLTKTL++A LDP ++LTQHYGAVQG++ALGP+
Sbjct: 182 WELRDFSANLVASVCRRFGHVYHNLQNRLTKTLIHAFLDPAKSLTQHYGAVQGISALGPS 241
Query: 292 VVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPL 351
+RLLLLPNL Y+ LLEPE+ LEKQKNE+KR EAWRVYGALL AAG+C+YDRLK+FP L
Sbjct: 242 AIRLLLLPNLVTYMQLLEPELQLEKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPGL 301
Query: 352 SSLPARSVWKTNGIVATLS-NKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEED 409
S R + ++N V+T + NKRK+S +L QPPLKK+ATD ++++++SM M +
Sbjct: 302 LSPSMRPLLRSNKRVSTNNPNKRKSSTNLSATQPPLKKMATDATANSMASASMGGNM-QG 360
Query: 410 ATAATPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGK 469
A P ++ SS +S + +RD+G AQ++SA+L Q WK+D ++G
Sbjct: 361 AMDGFPNQLANPGMMQASSSGQIVESIPSAVIRRDQGSDLAQRVSAVLRQAWKEDQDTGH 420
Query: 470 LLVSLFELFGEGILSFIPAPEMSLFL 495
LL SL+++FGE I SF+ PE+SLF+
Sbjct: 421 LLGSLYDVFGEAIFSFVQPPEISLFV 446
>gi|356527101|ref|XP_003532152.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
isoform 1 [Glycine max]
Length = 539
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 289/503 (57%), Positives = 379/503 (75%), Gaps = 19/503 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS RT LTT+DVD AL LRN+EP+YG S P +F+RA G++DLFY+DDKDV+ KD+I
Sbjct: 48 MRHSMRTFLTTEDVDTALALRNLEPIYGSTSNDPPQFKRAAGHKDLFYIDDKDVDIKDII 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQK-DGLPVEIKLPV 119
EAPLP+APLDTSI HWLAIEGVQP IPENAPV+A PS +E K DGLPV++KLPV
Sbjct: 108 EAPLPKAPLDTSITSHWLAIEGVQPAIPENAPVEA---PSEIRKSEYKEDGLPVDVKLPV 164
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
KH+++RELQLY++KIT+L +++ S+ F++ALVSLATDSGLHPLVPYFT+FVADEV++ L
Sbjct: 165 KHLITRELQLYYEKITDLTLNKPGSIPFRRALVSLATDSGLHPLVPYFTFFVADEVAQNL 224
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
NN ++LFALMR+V +LLQN I IE YLHQLMP ++TC+VAKR+GNRL+D+HWELR+F+A
Sbjct: 225 NNLAVLFALMRLVRSLLQNSQIHIELYLHQLMPPIITCIVAKRIGNRLSDDHWELRNFSA 284
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
LVA+IC+R+GH+Y+ LQ R+TKT L++ LDP +AL QHYGA++G+ ALG ++RLL+LP
Sbjct: 285 NLVASICQRFGHIYHNLQPRVTKTFLHSFLDPTKALPQHYGAIKGIEALGSRLIRLLILP 344
Query: 300 NLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSV 359
NL PYL LLEPEM EKQKNE+KRHEAW+VYGALL AAGQC+++++K+F L S P R
Sbjct: 345 NLEPYLHLLEPEMQPEKQKNEMKRHEAWQVYGALLGAAGQCVHEKVKMFSNLFSPPTRVT 404
Query: 360 WKTNG-IVATLSNKRKTSMD-----LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAA 413
+ +G V +S KRK S D ++ PP+KK+ATDGP V+ +SM M + +T
Sbjct: 405 SRGSGKAVIAMSGKRKASTDNLMQQQQQLPPMKKLATDGPGGVVAMNSMLVDM-QGSTGG 463
Query: 414 TPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVS 473
+ + I G R+ GD Q +KLS+ L Q WKDD+++G L+ S
Sbjct: 464 YSSMMGVSSMSMARQISIDNVPG------REVGDQQ-RKLSSTLAQAWKDDIDTGNLVSS 516
Query: 474 LFELFGEGILSFIPA-PEMSLFL 495
+ ELFGE +L F+ + PE +FL
Sbjct: 517 VVELFGESVLPFVVSNPEACMFL 539
>gi|356527103|ref|XP_003532153.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
isoform 2 [Glycine max]
Length = 545
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 289/506 (57%), Positives = 379/506 (74%), Gaps = 19/506 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS RT LTT+DVD AL LRN+EP+YG S P +F+RA G++DLFY+DDKDV+ KD+I
Sbjct: 48 MRHSMRTFLTTEDVDTALALRNLEPIYGSTSNDPPQFKRAAGHKDLFYIDDKDVDIKDII 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK-DGLPVEIK 116
EAPLP+APLDTSI HWLAIEGVQP IPENAPV+ I PS +E K DGLPV++K
Sbjct: 108 EAPLPKAPLDTSITSHWLAIEGVQPAIPENAPVEGIFTDLTPSEIRKSEYKEDGLPVDVK 167
Query: 117 LPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVS 176
LPVKH+++RELQLY++KIT+L +++ S+ F++ALVSLATDSGLHPLVPYFT+FVADEV+
Sbjct: 168 LPVKHLITRELQLYYEKITDLTLNKPGSIPFRRALVSLATDSGLHPLVPYFTFFVADEVA 227
Query: 177 RGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRD 236
+ LNN ++LFALMR+V +LLQN I IE YLHQLMP ++TC+VAKR+GNRL+D+HWELR+
Sbjct: 228 QNLNNLAVLFALMRLVRSLLQNSQIHIELYLHQLMPPIITCIVAKRIGNRLSDDHWELRN 287
Query: 237 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 296
F+A LVA+IC+R+GH+Y+ LQ R+TKT L++ LDP +AL QHYGA++G+ ALG ++RLL
Sbjct: 288 FSANLVASICQRFGHIYHNLQPRVTKTFLHSFLDPTKALPQHYGAIKGIEALGSRLIRLL 347
Query: 297 LLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPA 356
+LPNL PYL LLEPEM EKQKNE+KRHEAW+VYGALL AAGQC+++++K+F L S P
Sbjct: 348 ILPNLEPYLHLLEPEMQPEKQKNEMKRHEAWQVYGALLGAAGQCVHEKVKMFSNLFSPPT 407
Query: 357 RSVWKTNG-IVATLSNKRKTSMD-----LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDA 410
R + +G V +S KRK S D ++ PP+KK+ATDGP V+ +SM M + +
Sbjct: 408 RVTSRGSGKAVIAMSGKRKASTDNLMQQQQQLPPMKKLATDGPGGVVAMNSMLVDM-QGS 466
Query: 411 TAATPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKL 470
T + + I G R+ GD Q +KLS+ L Q WKDD+++G L
Sbjct: 467 TGGYSSMMGVSSMSMARQISIDNVPG------REVGDQQ-RKLSSTLAQAWKDDIDTGNL 519
Query: 471 LVSLFELFGEGILSFIPA-PEMSLFL 495
+ S+ ELFGE +L F+ + PE +FL
Sbjct: 520 VSSVVELFGESVLPFVVSNPEACMFL 545
>gi|449463755|ref|XP_004149597.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cucumis sativus]
gi|449503215|ref|XP_004161891.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cucumis sativus]
Length = 535
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 269/505 (53%), Positives = 357/505 (70%), Gaps = 27/505 (5%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RT L++ DVD ALKLRN+EP+YGFA+ LRF+RA G++DLFY+DDKDVE +VI
Sbjct: 48 MRHSKRTVLSSSDVDNALKLRNLEPIYGFAACDSLRFKRAAGHKDLFYIDDKDVELNNVI 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDG-LPVEIKLPV 119
E+PL +A +DTS+ HWLA+EGVQP +PE+ + P +G ++ K+ LP + K P
Sbjct: 108 ESPLAKATVDTSVATHWLAVEGVQPAVPESLLTEE---PHDGKKSDLKEEELPYDSKAPT 164
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
KH++SR+LQLYF+KIT L +++S S+L ++AL LA DSG+ PL+PYFT F+ADEVS+ L
Sbjct: 165 KHVISRDLQLYFEKITGLILNKSGSILIREALRCLAVDSGIQPLLPYFTCFIADEVSKNL 224
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
N LL ALMR+VW LL+NP I + PYLHQLMPS++TCLVAK+LG RL+DNHWELRD A
Sbjct: 225 CNCQLLIALMRMVWCLLRNPQIHMAPYLHQLMPSIITCLVAKQLGKRLSDNHWELRDLAA 284
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
LV+ ICKR+GHVY+ +Q R+TKTLL+ LDP + L QHYGAV+GLA LGP+VVR +LP
Sbjct: 285 SLVSLICKRFGHVYHNIQPRVTKTLLHVFLDPSKLLPQHYGAVRGLADLGPDVVRQFILP 344
Query: 300 NLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSL--PAR 357
NL PY+ LE +EKQKNE++RHEAW+V+ LL AAG+C++ LK+FP SL P R
Sbjct: 345 NLEPYMQYLE----MEKQKNEMRRHEAWQVHRTLLDAAGKCMHGWLKVFPLSLSLSPPMR 400
Query: 358 SVWKTNG-----IVATLSNKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEEDAT 411
S K N +V T+SNKRK +D +QP LKK+ATD + A+ +SM M+ T
Sbjct: 401 STSKINANINGKVVKTISNKRKAILDDSVQQPALKKMATDSTLGAIPMNSMMVDMQGATT 460
Query: 412 AA-TPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKL 470
TPL S+ + + + +E+R R+ K S L WK+DL++G L
Sbjct: 461 GLPTPLGGSN--------ISVARNFPNETRPGRE--GELGFKGSTALAIAWKEDLDAGPL 510
Query: 471 LVSLFELFGEGILSFIPAPEMSLFL 495
+ SLF+LFGE + SFIP PE+S FL
Sbjct: 511 ITSLFQLFGEDLFSFIPKPELSFFL 535
>gi|357459811|ref|XP_003600186.1| TATA binding protein-associated factor-like protein [Medicago
truncatula]
gi|355489234|gb|AES70437.1| TATA binding protein-associated factor-like protein [Medicago
truncatula]
Length = 510
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 276/495 (55%), Positives = 357/495 (72%), Gaps = 32/495 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS RT LTTDD D AL LRN+EP+YGFAS P RF++A G+ DLFY+DDKDV+ KD++
Sbjct: 48 MRHSMRTFLTTDDFDTALALRNLEPIYGFASNDPPRFKKAAGHNDLFYIDDKDVDIKDLV 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
EA LP+APLDTSI HWLAIEGVQP IPENAP +A N E D LPV+IKLPVK
Sbjct: 108 EADLPKAPLDTSITSHWLAIEGVQPAIPENAPPEASTEIKNSEYKE--DRLPVDIKLPVK 165
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
H+++ ELQLY++KI EL +++S S+LF++ALV+LATDSGLHPLVPYFT FVADEV+R LN
Sbjct: 166 HVITTELQLYYEKIIELILNKSGSILFRRALVTLATDSGLHPLVPYFTRFVADEVARNLN 225
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
N ++LFALMR+V +LLQNPHI IE YLHQLMP ++TC+VAKR+GNRL+DNHWELRDF+A
Sbjct: 226 NLNILFALMRLVRSLLQNPHIHIELYLHQLMPPIITCIVAKRIGNRLSDNHWELRDFSAN 285
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
LVA ICKR+GH+Y+ LQ R+TKT L+ LDP +AL QHYGA++G+AALG +VRLL+LPN
Sbjct: 286 LVALICKRFGHMYHNLQPRVTKTFLHTFLDPTKALPQHYGAIKGIAALGSRLVRLLILPN 345
Query: 301 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 360
L PYL LLEPE LEKQKNE+KR EAW+VYGALL A GQ +++++K F L S +R+
Sbjct: 346 LEPYLHLLEPEKQLEKQKNEIKRQEAWQVYGALLCAVGQNMHEKVKRFSSLLSPQSRATS 405
Query: 361 KTNGIVATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSD 420
NG K +M P + + P++++S +M + +T+ P
Sbjct: 406 SGNG-------KAMIAM-----PGVSGVV--APMNSMSVDNM-----QGSTSGFPTMMGV 446
Query: 421 ADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGE 480
++ S + +E+ + S+IL Q WKDD+++G+LL +FELFGE
Sbjct: 447 SNSSVGMSSSMGRQLSNENNTS-----------SSILAQAWKDDIDAGQLLPPVFELFGE 495
Query: 481 GILSFIPAPEMSLFL 495
+LSFIP P+ +FL
Sbjct: 496 SLLSFIPKPQAFIFL 510
>gi|302806890|ref|XP_002985176.1| hypothetical protein SELMODRAFT_234732 [Selaginella moellendorffii]
gi|300147004|gb|EFJ13670.1| hypothetical protein SELMODRAFT_234732 [Selaginella moellendorffii]
Length = 484
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 269/496 (54%), Positives = 334/496 (67%), Gaps = 67/496 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+R+ LTTDDV+ AL LRNVEP+YGFASG PLRFRRA+G+ DLF++DD++++ K++
Sbjct: 48 MRHSKRSVLTTDDVNTALSLRNVEPLYGFASGDPLRFRRAVGHSDLFFIDDRELDCKEIT 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE----QKDGLPVEIK 116
EAPL +APLDT+++ HWLAIEG+QP IPEN P+ ++AP ++ + D + V++K
Sbjct: 108 EAPLTKAPLDTAVMAHWLAIEGIQPAIPENVPIDPLSAPPEVKKSDIPGLKPDQMTVDLK 167
Query: 117 LPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVS 176
LPVKH+LSRELQLYF+KITEL V+ +D VL K SLATDSGLHPLVPYFT F+ADEV+
Sbjct: 168 LPVKHVLSRELQLYFEKITELIVTGADDVLLKDVFASLATDSGLHPLVPYFTQFIADEVT 227
Query: 177 RGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRD 236
RGLN+ LLF+LMRV +LL NPHI IEPYLHQLMPSVVTCLVAKRLG + NHWELRD
Sbjct: 228 RGLNDLPLLFSLMRVARSLLLNPHIHIEPYLHQLMPSVVTCLVAKRLGGKNFVNHWELRD 287
Query: 237 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 296
FTA L+A ICKR+GH Y LQTR+TKTLL+A LDPKRA+TQHYGAV+G+AALG +VRLL
Sbjct: 288 FTATLIAFICKRFGHAYYNLQTRVTKTLLHAFLDPKRAMTQHYGAVKGIAALGSKLVRLL 347
Query: 297 LLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPA 356
+LPNL Y++LL PEM + Q NE+KR+EA RVYGAL AAG CIY+ L+ PP PA
Sbjct: 348 ILPNLEVYINLLLPEMSSQDQANELKRYEAIRVYGALQAAAGNCIYEMLQSAPPSKKKPA 407
Query: 357 RSVWKTNGIVATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL 416
+ + S RK D +SM EED
Sbjct: 408 NN--------KSQSTTRK--------------------DVDGDASM---HEEDGA----- 431
Query: 417 DNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFE 476
D E +R + S+A WK+D+ G L+ SL +
Sbjct: 432 -----------------DDKDEGVKRRRRALSEA----------WKEDVEVGDLINSLVD 464
Query: 477 LFGEGILSFIPAPEMS 492
LFGEG+L FIP EMS
Sbjct: 465 LFGEGMLPFIPMREMS 480
>gi|302772845|ref|XP_002969840.1| hypothetical protein SELMODRAFT_146848 [Selaginella moellendorffii]
gi|300162351|gb|EFJ28964.1| hypothetical protein SELMODRAFT_146848 [Selaginella moellendorffii]
Length = 484
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 268/496 (54%), Positives = 333/496 (67%), Gaps = 67/496 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+R+ LTTDDV+ AL LRNVEP+YGFASG PLRFRRA+G+ DLF++DD++++ K++
Sbjct: 48 MRHSKRSVLTTDDVNTALSLRNVEPLYGFASGDPLRFRRAVGHSDLFFIDDRELDCKEIT 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE----QKDGLPVEIK 116
EAPL +APLDT+++ HWLAIEG+QP IPEN P+ ++AP ++ + D + V++K
Sbjct: 108 EAPLTKAPLDTAVMAHWLAIEGIQPAIPENVPIDPLSAPPEVKKSDIPGLKPDQMTVDLK 167
Query: 117 LPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVS 176
LPVKH+LSRELQLYF+KITEL V+ +D VL K SLATDSGLHPLVPYFT F+ADEV+
Sbjct: 168 LPVKHVLSRELQLYFEKITELIVTGADDVLLKDVFASLATDSGLHPLVPYFTQFIADEVT 227
Query: 177 RGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRD 236
RGLN+ LLF+LMRV +LL NPHI IEPYLHQLMPSVVTCLVAKRLG + NHWELRD
Sbjct: 228 RGLNDLPLLFSLMRVARSLLLNPHIHIEPYLHQLMPSVVTCLVAKRLGGKNFVNHWELRD 287
Query: 237 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 296
FTA L+A ICKR+GH Y LQTR+TKTLL+A LDPKRA+TQHYGAV+G+AALG +VRLL
Sbjct: 288 FTATLIAFICKRFGHAYYNLQTRVTKTLLHAFLDPKRAMTQHYGAVKGIAALGSKLVRLL 347
Query: 297 LLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPA 356
+LPNL Y++LL PEM + Q NE+KR+EA RVYGAL AAG CIY+ L+ PP PA
Sbjct: 348 ILPNLEVYINLLLPEMSSQDQANELKRYEAIRVYGALQAAAGNCIYEMLQSAPPSRKKPA 407
Query: 357 RSVWKTNGIVATLSNKRKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL 416
+ + S RK D +SM EED
Sbjct: 408 NN--------KSQSTTRK--------------------DVDGDASM---HEEDGA----- 431
Query: 417 DNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFE 476
D E +R + S+A WK+D+ G L+ SL +
Sbjct: 432 -----------------DDKDEGVKRRRRALSEA----------WKEDVEVGDLINSLVD 464
Query: 477 LFGEGILSFIPAPEMS 492
LFGE +L FIP EMS
Sbjct: 465 LFGEEMLPFIPMREMS 480
>gi|42495554|gb|AAS17938.1| TATA binding protein associated factor 6b isoform 1 [Arabidopsis
thaliana]
Length = 504
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 262/501 (52%), Positives = 334/501 (66%), Gaps = 48/501 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH+RRTTL DVD AL RN+EP G S +RF+RA RDL++ DDKDVE K+VI
Sbjct: 46 MRHARRTTLMAHDVDSALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVI 102
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
EAPLP AP D S+ HWLAI+G+QP IP+N+P+QAI S+ +E KD L +
Sbjct: 103 EAPLPNAPPDASVFSHWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDD-----GLAAR 154
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
+LS++LQ+YFDK+TE A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + ++
Sbjct: 155 QVLSKDLQIYFDKVTEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMD 214
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
NY +L ALMR+ +LL NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA
Sbjct: 215 NYPILLALMRLARSLLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTAS 274
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
VA+ CKR+GHVY+ L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LPN
Sbjct: 275 TVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPN 334
Query: 301 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 360
LGPYL LL PEM LEKQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SVW
Sbjct: 335 LGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVW 394
Query: 361 KTNG-IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL-D 417
KTNG + + +KRK S D L QPPLKKIA G + ST M+ T P
Sbjct: 395 KTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQS 449
Query: 418 NSDAD---HPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSL 474
++DAD H SPS+ I P + + + + D L L
Sbjct: 450 HTDADARHHNSPST--IAPKTSAAAGTDVDN------------------------YLFPL 483
Query: 475 FELFGEGILSFIPAPEMSLFL 495
FE FGE +L F P E+S FL
Sbjct: 484 FEYFGESMLMFTPTHELSFFL 504
>gi|17064762|gb|AAL32535.1| Very similar to TATA binding protein-associated factor [Arabidopsis
thaliana]
gi|28059031|gb|AAO29980.1| Very similar to TATA binding protein-associated factor [Arabidopsis
thaliana]
Length = 466
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 262/501 (52%), Positives = 334/501 (66%), Gaps = 48/501 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH+RRTTL DVD AL RN+EP G S +RF+RA RDL++ DDKDVE K+VI
Sbjct: 8 MRHARRTTLMAHDVDSALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVI 64
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
EAPLP AP D S+ HWLAI+G+QP IP+N+P+QAI S+ +E KD L +
Sbjct: 65 EAPLPNAPPDASVFSHWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDD-----GLAAR 116
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
+LS++LQ+YFDK+TE A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + ++
Sbjct: 117 QVLSKDLQIYFDKVTEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMD 176
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
NY +L ALMR+ +LL NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA
Sbjct: 177 NYPILLALMRLARSLLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTAS 236
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
VA+ CKR+GHVY+ L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LPN
Sbjct: 237 TVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPN 296
Query: 301 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 360
LGPYL LL PEM LEKQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SVW
Sbjct: 297 LGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVW 356
Query: 361 KTNG-IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLD- 417
KTNG + + +KRK S D L QPPLKKIA G + ST M+ T P
Sbjct: 357 KTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQS 411
Query: 418 NSDAD---HPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSL 474
++DAD H SPS+ I P + + + + D L L
Sbjct: 412 HTDADARHHNSPST--IAPKTSAAAGTDVDN------------------------YLFPL 445
Query: 475 FELFGEGILSFIPAPEMSLFL 495
FE FGE +L F P E+S FL
Sbjct: 446 FEYFGESMLMFTPTHELSFFL 466
>gi|334183298|ref|NP_974024.2| TBP-associated factor 6B [Arabidopsis thaliana]
gi|332194964|gb|AEE33085.1| TBP-associated factor 6B [Arabidopsis thaliana]
Length = 527
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 262/501 (52%), Positives = 334/501 (66%), Gaps = 48/501 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH+RRTTL DVD AL RN+EP G S +RF+RA RDL++ DDKDVE K+VI
Sbjct: 69 MRHARRTTLMAHDVDSALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVI 125
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
EAPLP AP D S+ HWLAI+G+QP IP+N+P+QAI S+ +E KD L +
Sbjct: 126 EAPLPNAPPDASVFLHWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDD-----GLAAR 177
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
+LS++LQ+YFDK+TE A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + ++
Sbjct: 178 QVLSKDLQIYFDKVTEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMD 237
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
NY +L ALMR+ +LL NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA
Sbjct: 238 NYPILLALMRLARSLLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTAS 297
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
VA+ CKR+GHVY+ L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LPN
Sbjct: 298 TVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPN 357
Query: 301 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 360
LGPYL LL PEM LEKQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SVW
Sbjct: 358 LGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVW 417
Query: 361 KTNG-IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLD- 417
KTNG + + +KRK S D L QPPLKKIA G + ST M+ T P
Sbjct: 418 KTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQS 472
Query: 418 NSDAD---HPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSL 474
++DAD H SPS+ I P + + + + D L L
Sbjct: 473 HTDADARHHNSPST--IAPKTSAAAGTDVDN------------------------YLFPL 506
Query: 475 FELFGEGILSFIPAPEMSLFL 495
FE FGE +L F P E+S FL
Sbjct: 507 FEYFGESMLMFTPTHELSFFL 527
>gi|334183297|ref|NP_175838.3| TBP-associated factor 6B [Arabidopsis thaliana]
gi|332194963|gb|AEE33084.1| TBP-associated factor 6B [Arabidopsis thaliana]
Length = 504
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 262/501 (52%), Positives = 334/501 (66%), Gaps = 48/501 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH+RRTTL DVD AL RN+EP G S +RF+RA RDL++ DDKDVE K+VI
Sbjct: 46 MRHARRTTLMAHDVDSALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVI 102
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
EAPLP AP D S+ HWLAI+G+QP IP+N+P+QAI S+ +E KD L +
Sbjct: 103 EAPLPNAPPDASVFLHWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDD-----GLAAR 154
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
+LS++LQ+YFDK+TE A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + ++
Sbjct: 155 QVLSKDLQIYFDKVTEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMD 214
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
NY +L ALMR+ +LL NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA
Sbjct: 215 NYPILLALMRLARSLLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTAS 274
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
VA+ CKR+GHVY+ L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LPN
Sbjct: 275 TVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPN 334
Query: 301 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 360
LGPYL LL PEM LEKQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SVW
Sbjct: 335 LGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVW 394
Query: 361 KTNG-IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLD- 417
KTNG + + +KRK S D L QPPLKKIA G + ST M+ T P
Sbjct: 395 KTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQS 449
Query: 418 NSDAD---HPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSL 474
++DAD H SPS+ I P + + + + D L L
Sbjct: 450 HTDADARHHNSPST--IAPKTSAAAGTDVDN------------------------YLFPL 483
Query: 475 FELFGEGILSFIPAPEMSLFL 495
FE FGE +L F P E+S FL
Sbjct: 484 FEYFGESMLMFTPTHELSFFL 504
>gi|42495556|gb|AAS17939.1| TATA binding protein associated factor 6b isoform 2 [Arabidopsis
thaliana]
Length = 497
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 260/502 (51%), Positives = 328/502 (65%), Gaps = 57/502 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH+RRTTL DVD AL RN+EP G S +RF+RA RDL++ DDKDVE K+VI
Sbjct: 46 MRHARRTTLMAHDVDSALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVI 102
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD-GLPVEIKLPV 119
EAPLP AP D S+ HWLAI+G+QP IP+N+P+QAI S+ +E KD GL
Sbjct: 103 EAPLPNAPPDASVFSHWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDDGLAAR----- 154
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
Q+YFDK+TE A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + +
Sbjct: 155 --------QIYFDKVTEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNM 206
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
+NY +L ALMR+ +LL NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA
Sbjct: 207 DNYPILLALMRLARSLLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTA 266
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
VA+ CKR+GHVY+ L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LP
Sbjct: 267 STVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLP 326
Query: 300 NLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSV 359
NLGPYL LL PEM LEKQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SV
Sbjct: 327 NLGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSV 386
Query: 360 WKTNG-IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL- 416
WKTNG + + +KRK S D L QPPLKKIA G + ST M+ T P
Sbjct: 387 WKTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQ 441
Query: 417 DNSDAD---HPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVS 473
++DAD H SPS+ I P + + + + D L
Sbjct: 442 SHTDADARHHNSPST--IAPKTSAAAGTDVDN------------------------YLFP 475
Query: 474 LFELFGEGILSFIPAPEMSLFL 495
LFE FGE +L F P E+S FL
Sbjct: 476 LFEYFGESMLMFTPTHELSFFL 497
>gi|334183299|ref|NP_001031187.2| TBP-associated factor 6B [Arabidopsis thaliana]
gi|332194965|gb|AEE33086.1| TBP-associated factor 6B [Arabidopsis thaliana]
Length = 497
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 260/502 (51%), Positives = 328/502 (65%), Gaps = 57/502 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH+RRTTL DVD AL RN+EP G S +RF+RA RDL++ DDKDVE K+VI
Sbjct: 46 MRHARRTTLMAHDVDSALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVI 102
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD-GLPVEIKLPV 119
EAPLP AP D S+ HWLAI+G+QP IP+N+P+QAI S+ +E KD GL
Sbjct: 103 EAPLPNAPPDASVFLHWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDDGLAAR----- 154
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
Q+YFDK+TE A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + +
Sbjct: 155 --------QIYFDKVTEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNM 206
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
+NY +L ALMR+ +LL NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA
Sbjct: 207 DNYPILLALMRLARSLLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTA 266
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
VA+ CKR+GHVY+ L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LP
Sbjct: 267 STVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLP 326
Query: 300 NLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSV 359
NLGPYL LL PEM LEKQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SV
Sbjct: 327 NLGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSV 386
Query: 360 WKTNG-IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL- 416
WKTNG + + +KRK S D L QPPLKKIA G + ST M+ T P
Sbjct: 387 WKTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQ 441
Query: 417 DNSDAD---HPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVS 473
++DAD H SPS+ I P + + + + D L
Sbjct: 442 SHTDADARHHNSPST--IAPKTSAAAGTDVDN------------------------YLFP 475
Query: 474 LFELFGEGILSFIPAPEMSLFL 495
LFE FGE +L F P E+S FL
Sbjct: 476 LFEYFGESMLMFTPTHELSFFL 497
>gi|42495558|gb|AAS17940.1| TATA binding protein associated factor 6b isoform 3 [Arabidopsis
thaliana]
Length = 476
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/489 (51%), Positives = 325/489 (66%), Gaps = 48/489 (9%)
Query: 13 DVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTS 72
DVD AL RN+EP G S +RF+RA RDL++ DDKDVE K+VIEAPLP AP D S
Sbjct: 30 DVDSALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDAS 86
Query: 73 IVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFD 132
+ HWLAI+G+QP IP+N+P+QAI S+ +E KD L + +LS++LQ+YFD
Sbjct: 87 VFSHWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDD-----GLAARQVLSKDLQIYFD 138
Query: 133 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 192
K+TE A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + ++NY +L ALMR+
Sbjct: 139 KVTEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMDNYPILLALMRLA 198
Query: 193 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHV 252
+LL NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA VA+ CKR+GHV
Sbjct: 199 RSLLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTASTVASTCKRFGHV 258
Query: 253 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEM 312
Y+ L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LPNLGPYL LL PEM
Sbjct: 259 YHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLPEM 318
Query: 313 LLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSN 371
LEKQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SVWKTNG + + +
Sbjct: 319 GLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVWKTNGKLTSPRQS 378
Query: 372 KRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL-DNSDAD---HPSP 426
KRK S D L QPPLKKIA G + ST M+ T P ++DAD H SP
Sbjct: 379 KRKASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQSHTDADARHHNSP 433
Query: 427 SSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFI 486
S+ I P + + + + D L LFE FGE +L F
Sbjct: 434 ST--IAPKTSAAAGTDVDN------------------------YLFPLFEYFGESMLMFT 467
Query: 487 PAPEMSLFL 495
P E+S FL
Sbjct: 468 PTHELSFFL 476
>gi|334183302|ref|NP_001185221.1| TBP-associated factor 6B [Arabidopsis thaliana]
gi|332194967|gb|AEE33088.1| TBP-associated factor 6B [Arabidopsis thaliana]
Length = 476
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 253/489 (51%), Positives = 325/489 (66%), Gaps = 48/489 (9%)
Query: 13 DVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTS 72
DV+ AL RN+EP G S +RF+RA RDL++ DDKDVE K+VIEAPLP AP D S
Sbjct: 30 DVESALHFRNLEPTSGSKS---MRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDAS 86
Query: 73 IVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFD 132
+ HWLAI+G+QP IP+N+P+QAI S+ +E KD L + +LS++LQ+YFD
Sbjct: 87 VFLHWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDD-----GLAARQVLSKDLQIYFD 138
Query: 133 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 192
K+TE A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + ++NY +L ALMR+
Sbjct: 139 KVTEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMDNYPILLALMRLA 198
Query: 193 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHV 252
+LL NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA VA+ CKR+GHV
Sbjct: 199 RSLLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTASTVASTCKRFGHV 258
Query: 253 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEM 312
Y+ L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LPNLGPYL LL PEM
Sbjct: 259 YHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLPEM 318
Query: 313 LLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSN 371
LEKQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SVWKTNG + + +
Sbjct: 319 GLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVWKTNGKLTSPRQS 378
Query: 372 KRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPL-DNSDAD---HPSP 426
KRK S D L QPPLKKIA G + ST M+ T P ++DAD H SP
Sbjct: 379 KRKASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQSHTDADARHHNSP 433
Query: 427 SSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFI 486
S+ I P + + + + D L LFE FGE +L F
Sbjct: 434 ST--IAPKTSAAAGTDVDN------------------------YLFPLFEYFGESMLMFT 467
Query: 487 PAPEMSLFL 495
P E+S FL
Sbjct: 468 PTHELSFFL 476
>gi|334183300|ref|NP_001031188.2| TBP-associated factor 6B [Arabidopsis thaliana]
gi|332194966|gb|AEE33087.1| TBP-associated factor 6B [Arabidopsis thaliana]
Length = 428
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/467 (52%), Positives = 313/467 (67%), Gaps = 45/467 (9%)
Query: 35 LRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQ 94
+RF+RA RDL++ DDKDVE K+VIEAPLP AP D S+ HWLAI+G+QP IP+N+P+Q
Sbjct: 1 MRFKRAPENRDLYFFDDKDVELKNVIEAPLPNAPPDASVFLHWLAIDGIQPSIPQNSPLQ 60
Query: 95 AIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSL 154
AI S+ +E KD L + +LS++LQ+YFDK+TE A+++S S LF+QAL SL
Sbjct: 61 AI---SDLKRSEYKDD-----GLAARQVLSKDLQIYFDKVTEWALTQSGSTLFRQALASL 112
Query: 155 ATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLHPLVP+FT F+A+E+ + ++NY +L ALMR+ +LL NPH+ IEPYLHQLMPS+
Sbjct: 113 EIDPGLHPLVPFFTSFIAEEIVKNMDNYPILLALMRLARSLLHNPHVHIEPYLHQLMPSI 172
Query: 215 VTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA 274
+TCL+AKRLG R +DNHW+LR+FTA VA+ CKR+GHVY+ L R+T++LL+ LDP +A
Sbjct: 173 ITCLIAKRLGRRSSDNHWDLRNFTASTVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKA 232
Query: 275 LTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 334
L QHYGA+QG+ ALG N+VR L+LPNLGPYL LL PEM LEKQK E KRH AW VYGAL+
Sbjct: 233 LPQHYGAIQGMVALGLNMVRFLVLPNLGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALM 292
Query: 335 QAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSNKRKTSMD-LEEQPPLKKIATDG 392
AAG+C+Y+RLK L S P SVWKTNG + + +KRK S D L QPPLKKIA G
Sbjct: 293 VAAGRCLYERLKTSETLLSPPTSSVWKTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGG 352
Query: 393 PVDAVSTSSMPTPMEEDATAATPL-DNSDAD---HPSPSSVQIPPDSGSESRSKRDKGDS 448
+ ST M+ T P ++DAD H SPS+ I P + + + + D
Sbjct: 353 IIQMSSTQ-----MQMRGTTTVPQQSHTDADARHHNSPST--IAPKTSAAAGTDVDN--- 402
Query: 449 QAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMSLFL 495
L LFE FGE +L F P E+S FL
Sbjct: 403 ---------------------YLFPLFEYFGESMLMFTPTHELSFFL 428
>gi|297848008|ref|XP_002891885.1| TATA binding protein associated factor 6b [Arabidopsis lyrata
subsp. lyrata]
gi|297337727|gb|EFH68144.1| TATA binding protein associated factor 6b [Arabidopsis lyrata
subsp. lyrata]
Length = 503
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 255/502 (50%), Positives = 322/502 (64%), Gaps = 51/502 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASG-----GPLRFRRAIGYRDLFYLDDKDVE 55
MRH+RRTTL DVD AL RN+E +RF+RA RDL++LDDKDVE
Sbjct: 46 MRHARRTTLMAHDVDSALHFRNLEVSSSSLLLPTSGSKSMRFKRAPENRDLYFLDDKDVE 105
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEI 115
K+VIEAPLP AP D SI HWLAI+G+QP IP+N+ +QAI S+ +E KD
Sbjct: 106 LKNVIEAPLPNAPPDASIFSHWLAIDGIQPSIPQNSHLQAI---SDLKRSEYKDD----- 157
Query: 116 KLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEV 175
L + +LS++LQ+YFDK+TE A+++S S LF+QAL SL TD GLHPLVP+FT F+A+E+
Sbjct: 158 GLAARQVLSKDLQIYFDKVTEWALTQSGSTLFRQALSSLETDPGLHPLVPFFTSFIAEEI 217
Query: 176 SRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELR 235
R ++NY +L ALMR+ +LL NPH+ IEPYLHQ MPS++TCL+AK LG + +DNHW LR
Sbjct: 218 VRNMDNYPILLALMRLARSLLHNPHVHIEPYLHQFMPSIITCLIAKSLGRKSSDNHWHLR 277
Query: 236 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 295
+FTA VA+ CKRYGHVY+ L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR
Sbjct: 278 NFTASTVASTCKRYGHVYHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRF 337
Query: 296 LLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLP 355
L+LPNLGPYL LL PEM EKQK+E KRH AW VYGAL+ AAG+C+Y+RLK L S P
Sbjct: 338 LVLPNLGPYLLLLLPEMEPEKQKDEAKRHGAWLVYGALMVAAGRCLYERLKSSETLLSPP 397
Query: 356 ARSVWKTNG-IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAA 413
SVWKTNG + + +KRK S D L QPPLKKIA G + S M+ T
Sbjct: 398 NSSVWKTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSAQ-----MQMHGTTT 452
Query: 414 TPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVS 473
P +S RD A++ SA L + L
Sbjct: 453 VP---------------------QQSLVGRDI----ARRTSAAL------GTDVDNYLFP 481
Query: 474 LFELFGEGILSFIPAPEMSLFL 495
LFE FGE +L F P E+S FL
Sbjct: 482 LFEYFGESMLMFTPKHELSFFL 503
>gi|449529832|ref|XP_004171902.1| PREDICTED: transcription initiation factor TFIID subunit 6-like,
partial [Cucumis sativus]
Length = 294
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 201/247 (81%), Positives = 227/247 (91%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+RTTLT +DVD AL LRNVEP+YGFASGGPLRF+RAIG+RDLFYL+DKD+EFKD+I
Sbjct: 48 MRHSKRTTLTANDVDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDII 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
+APLP+AP DT++ CHWLAIEGVQP IPENAPV+ I PS+ +NEQ GLPV+IKLPVK
Sbjct: 108 DAPLPKAPFDTAVFCHWLAIEGVQPAIPENAPVEVILPPSDAKSNEQMGGLPVDIKLPVK 167
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
HILS+ELQLYFDKITEL VSRS S+LFK+ALVSLATDSGLHPLVPYFT F+ADEV+RGL
Sbjct: 168 HILSKELQLYFDKITELVVSRSSSILFKKALVSLATDSGLHPLVPYFTCFIADEVARGLG 227
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
+YSLLFALMRVVW+LLQNPHI IEPYLHQ+MPSVVTCLVAKRLGNR +DNHWELRDFTAK
Sbjct: 228 DYSLLFALMRVVWSLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRFSDNHWELRDFTAK 287
Query: 241 LVAAICK 247
+VA ICK
Sbjct: 288 VVALICK 294
>gi|4585980|gb|AAD25616.1|AC005287_18 TATA binding protein-associated factor-like protein [Arabidopsis
thaliana]
Length = 491
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 236/501 (47%), Positives = 311/501 (62%), Gaps = 61/501 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH+RRTTL DVD AL RN+E + +++ + ++
Sbjct: 46 MRHARRTTLMAHDVDSALHFRNLE----------------LLRTEIYTSSMTKMSSSRML 89
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
L + L + HWLAI+G+QP IP+N+P+QAI S+ +E KD L +
Sbjct: 90 SKLLYQMHLLMHLFSHWLAIDGIQPSIPQNSPLQAI---SDLKRSEYKDD-----GLAAR 141
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
+LS++LQ+YFDK+TE A+++S S LF+QAL SL D GLHPLVP+FT F+A+E+ + ++
Sbjct: 142 QVLSKDLQIYFDKVTEWALTQSGSTLFRQALASLEIDPGLHPLVPFFTSFIAEEIVKNMD 201
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
NY +L ALMR+ +LL NPH+ IEPYLHQLMPS++TCL+AKRLG R +DNHW+LR+FTA
Sbjct: 202 NYPILLALMRLARSLLHNPHVHIEPYLHQLMPSIITCLIAKRLGRRSSDNHWDLRNFTAS 261
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
VA+ CKR+GHVY+ L R+T++LL+ LDP +AL QHYGA+QG+ ALG N+VR L+LPN
Sbjct: 262 TVASTCKRFGHVYHNLLPRVTRSLLHTFLDPTKALPQHYGAIQGMVALGLNMVRFLVLPN 321
Query: 301 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVW 360
LGPYL LL PEM LEKQK E KRH AW VYGAL+ AAG+C+Y+RLK L S P SVW
Sbjct: 322 LGPYLLLLLPEMGLEKQKEEAKRHGAWLVYGALMVAAGRCLYERLKTSETLLSPPTSSVW 381
Query: 361 KTNG-IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLD- 417
KTNG + + +KRK S D L QPPLKKIA G + ST M+ T P
Sbjct: 382 KTNGKLTSPRQSKRKASSDNLTHQPPLKKIAVGGIIQMSSTQ-----MQMRGTTTVPQQS 436
Query: 418 NSDAD---HPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSL 474
++DAD H SPS+ I P + + + + D L L
Sbjct: 437 HTDADARHHNSPST--IAPKTSAAAGTDVDN------------------------YLFPL 470
Query: 475 FELFGEGILSFIPAPEMSLFL 495
FE FGE +L F P E+S FL
Sbjct: 471 FEYFGESMLMFTPTHELSFFL 491
>gi|217074866|gb|ACJ85793.1| unknown [Medicago truncatula]
gi|388501788|gb|AFK38960.1| unknown [Medicago truncatula]
Length = 326
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/326 (59%), Positives = 236/326 (72%), Gaps = 19/326 (5%)
Query: 189 MRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKR 248
MRVV +LLQNPHI IEPYLHQLMPS+VTCLVAKRLG+RL DNHWELRDFTA LVA+I KR
Sbjct: 1 MRVVNSLLQNPHIHIEPYLHQLMPSIVTCLVAKRLGSRLTDNHWELRDFTANLVASIYKR 60
Query: 249 YGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLL 308
+GHVY+ LQ+RL+KTLLNA DPK+A+TQHYGA+QGL ALGPNVVRLLLLPNL Y+ LL
Sbjct: 61 FGHVYSNLQSRLSKTLLNAFSDPKKAMTQHYGAIQGLGALGPNVVRLLLLPNLEAYIRLL 120
Query: 309 EPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVAT 368
EPEMLLE QKNE+KRHEAWRVYGALL+AAGQC+Y LK+FP S +VWKT+ V T
Sbjct: 121 EPEMLLETQKNEMKRHEAWRVYGALLRAAGQCVYVSLKLFPAFPSPLPHTVWKTSASVLT 180
Query: 369 L-SNKRKTS-MDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDAT---AATPLDNSDADH 423
NKRK S M+LE+QPPLKK+ TDG V V +S + EE+ ++ L A
Sbjct: 181 SPPNKRKASPMELEQQPPLKKVDTDGEVSVVQENSSASHKEEETVTQASSAELKIGAASS 240
Query: 424 PSPSSVQIPPD-----SGSESRSKR---------DKGDSQAQKLSAILPQVWKDDLNSGK 469
+ +I D SG +++ + GD+Q K+S++L +WKD+LNSG+
Sbjct: 241 SGETKNKITTDGVVRSSGGDTQDNKITTDGVVRSSGGDTQDLKISSVLAHIWKDELNSGR 300
Query: 470 LLVSLFELFGEGILSFIPAPEMSLFL 495
+L SL ELFGE ILSFI EM +FL
Sbjct: 301 VLTSLVELFGENILSFIQNREMCMFL 326
>gi|413956297|gb|AFW88946.1| putative TATA binding protein family protein [Zea mays]
Length = 334
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 174 EVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE 233
+V+R L + +L ALMRVV +LL+NPHI IEPYLHQLMPS++TC+VAKRLG+RL+DNHWE
Sbjct: 12 QVTRSLGDLPVLLALMRVVQSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWE 71
Query: 234 LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVV 293
LRDF+A LVA +C+R+GHVY+ LQ RLTKTL++A LDP ++LTQHYGAVQG++ALGP+ +
Sbjct: 72 LRDFSANLVALVCQRFGHVYHNLQNRLTKTLIHAFLDPAKSLTQHYGAVQGISALGPSAI 131
Query: 294 RLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSS 353
RLLLLPNL Y+ LLEPE+ LEKQKNE+KR EAWRVYGALL AAG+C+YDRLK+FP L S
Sbjct: 132 RLLLLPNLVTYMQLLEPELQLEKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPGLLS 191
Query: 354 LPARSVWKTNGIVATLS-NKRKTSMDLE-EQPPLKKIATDGPVDAVSTSSMPTPMEEDAT 411
R + ++N V T + NKRK+S DL QPPLKK+ATD ++++++SM M + A
Sbjct: 192 PSMRPLLQSNKRVLTNNPNKRKSSTDLSATQPPLKKMATDATANSMASASMGGNM-QGAM 250
Query: 412 AATPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLL 471
P + SS +S + +RD+G AQ++SA+L Q WK+D ++G LL
Sbjct: 251 DGFPNQLGNPGMMQASSSGQTVESIPSAAVRRDQGSDLAQRVSAVLRQAWKEDQDTGHLL 310
Query: 472 VSLFELFGEGILSFIPAPEMSLFL 495
SL+E+FGE I SF+ PE+SLF+
Sbjct: 311 GSLYEVFGEAIFSFVQPPEISLFV 334
>gi|440797528|gb|ELR18614.1| Hypothetical protein ACA1_155710 [Acanthamoeba castellanii str.
Neff]
Length = 462
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 169/340 (49%), Positives = 239/340 (70%), Gaps = 5/340 (1%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+R ++T+DV+ AL+LRNVE +YGF+ PL+F +A+G +DLF++DD++++F ++I
Sbjct: 1 MRHSKREKMSTEDVNNALRLRNVETLYGFSGNEPLKFVKAVGTKDLFFIDDREIDFTEII 60
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQ-AIAAPSNGTNNEQKDGLPVEIKLPV 119
+PLP P ++S+ HWLA+EGVQP IP+N +Q + ++++ V
Sbjct: 61 ASPLPEVPRESSLSAHWLAVEGVQPAIPQNPTLQIETGDAALKRKRAAAAESDLQVRPIV 120
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
KH LS+ELQLY++KIT+ AV + + AL SLATD G+ L+PYFT F++DEV+ L
Sbjct: 121 KHTLSKELQLYYEKITK-AVKGTSEKVATAALNSLATDPGIQQLLPYFTQFISDEVTHNL 179
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
+N + L LMR+V LLQ+ ++ IEPYLHQLMP ++TCLV +RL ++HWELRD+ A
Sbjct: 180 HNLAYLKNLMRMVRALLQSNNLHIEPYLHQLMPPILTCLVGRRLCENPNEDHWELRDYAA 239
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
LVA IC R+G Y LQ R+TKTL+NA LD R LT HYGA+ GL++LG V +LL+LP
Sbjct: 240 SLVALICLRFGKAYTNLQPRITKTLINAFLDLSRPLTTHYGAIVGLSSLGHYVTQLLILP 299
Query: 300 NLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQ 339
NL YL+LLEPE+ N ++R EA + YGALL+AAG+
Sbjct: 300 NLKSYLTLLEPEL---NGTNAIRRLEAKKCYGALLKAAGR 336
>gi|255079732|ref|XP_002503446.1| predicted protein [Micromonas sp. RCC299]
gi|226518713|gb|ACO64704.1| predicted protein [Micromonas sp. RCC299]
Length = 401
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/357 (46%), Positives = 232/357 (64%), Gaps = 12/357 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASG-GPLRFRRAIGYRDLFYLDDKDVEFKDV 59
MRHS+RT L+TDD++ +L +R EP+YGF +G GP+ F G+ +L+ ++K ++ KD+
Sbjct: 45 MRHSKRTELSTDDINSSLVMRRCEPLYGFPAGAGPIPFHEVPGHPELYIPENKILDLKDI 104
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-AP---VQAIAAPSNGTNNEQK--DGLPV 113
+ A LPR P+ ++V HWLA+EGVQP+IPEN AP + P G K +G
Sbjct: 105 LAAKLPRPPIAVNVVPHWLAVEGVQPLIPENPAPRPELDRTPGPPPGATGAVKPEEGTGA 164
Query: 114 EIKLPVKHILSRELQLYFDKITELAVSRSDSV-----LFKQALVSLATDSGLHPLVPYFT 168
++ V H LS+ELQLYFD+IT + + + AL SLATDSGLH L+PYFT
Sbjct: 165 VVQPVVAHELSKELQLYFDRITAVVRGGGGERGAEAPVLRAALESLATDSGLHQLLPYFT 224
Query: 169 YFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA 228
FV DEV+ L N L AL+ + L NP I +E YLHQLMP+++TC+VAKRL
Sbjct: 225 QFVQDEVATSLRNMPRLKALVGTIEALCSNPEIHVELYLHQLMPTLITCMVAKRLSADPT 284
Query: 229 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
D+HW LR ++A++++ IC R+G Y T+Q R+T+TLL A+LDP++ + H+GA+ GLAAL
Sbjct: 285 DDHWTLRRYSAEVMSGICARFGKDYPTIQPRITRTLLRAMLDPRKPFSTHFGAIAGLAAL 344
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRL 345
GP V RLL++PNL YL +LEP + E K V EA RV+ AL +A G C++ L
Sbjct: 345 GPRVTRLLIVPNLKAYLEVLEPHLTREHAKRRVTSSEARRVHDALKEAIGACLHAAL 401
>gi|290999389|ref|XP_002682262.1| predicted protein [Naegleria gruberi]
gi|284095889|gb|EFC49518.1| predicted protein [Naegleria gruberi]
Length = 399
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 227/355 (63%), Gaps = 20/355 (5%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFA--SGGPLRFRRAIGYRDLFYLDDKDVEFKD 58
M+H++R LTTDD+ AL ++N+EP+YGF S P RFRR +DL++L+D +++ KD
Sbjct: 48 MKHAKRGVLTTDDISNALAMKNIEPLYGFKGQSSQPNRFRRVKQTKDLYFLEDVELDLKD 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPV----- 113
+E PLP+ P+ SI HWLAI+G+QP IP+N ++ + + ++ V
Sbjct: 108 CLEKPLPKIPIGPSIFTHWLAIQGIQPKIPQNPTIEETESERKKESKDKDQSKKVSSSHD 167
Query: 114 ---EIKLPVKHILSRELQLYFDKITELA--VSRSDSVLFKQALVSLATDSGLHPLVPYFT 168
E K VKHILS ELQ+YF+K+TE + L K + SLATDSG++ LVPYFT
Sbjct: 168 PNVEFKPLVKHILSEELQMYFEKVTEAIKDTTNQKKELRKAVIESLATDSGINQLVPYFT 227
Query: 169 YFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA 228
F+A EV+ + N +LL+ LM + LL NP+I IE YLHQ+MPS++TC+V K L
Sbjct: 228 QFIASEVTNNMRNLTLLYRLMEMTKALLVNPNIHIELYLHQIMPSILTCIVGKTLCENPY 287
Query: 229 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
+NHW LRDF+A +A IC+++G Y+TLQ R+TKTLL+A LDPKR+ HYGA+ G+ AL
Sbjct: 288 ENHWGLRDFSANTIAYICRKFGSSYHTLQPRITKTLLHAFLDPKRSRATHYGAIVGITAL 347
Query: 289 GPNVVRLLLL-----PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAG 338
G +V +LLLL NL + +LL PE++ +H+A+ Y ALL A G
Sbjct: 348 GSHVTQLLLLEPPKNSNLKIFCNLLLPELVSSDMNT---KHQAFMCYKALLTAPG 399
>gi|449518903|ref|XP_004166475.1| PREDICTED: transcription initiation factor TFIID subunit 6-like,
partial [Cucumis sativus]
Length = 256
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/258 (60%), Positives = 191/258 (74%), Gaps = 8/258 (3%)
Query: 242 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
++ C R+GHVYNTLQT+LTKTLLNA LDPKRALTQHYGA+QGLAALG NVV LL+LPNL
Sbjct: 3 LSMFC-RFGHVYNTLQTKLTKTLLNAFLDPKRALTQHYGAIQGLAALGMNVVHLLILPNL 61
Query: 302 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWK 361
PYL LLEPEMLL QKNE+KRHEAWRVYGALL+A GQCIYD +KIFPPL S+PA S+ +
Sbjct: 62 EPYLGLLEPEMLLANQKNEMKRHEAWRVYGALLRAVGQCIYDHVKIFPPLPSMPAGSILR 121
Query: 362 TNG--IVATLSNKRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDN 418
TN I T NKRK + D LE QPPLKK+ D P+ + T+S + ME A P +
Sbjct: 122 TNARVITTTFLNKRKENADHLEGQPPLKKMVMDSPMGVMPTNSSASHME---GAVNPASS 178
Query: 419 SDADHPSPSSVQ-IPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFEL 477
S++ P+S Q + ++ S S++ K D Q K SA+L QVWK+DL SGKLL S+ +L
Sbjct: 179 SNSSLILPTSSQPLQNETIPGSNSRKGKYDDQILKRSAVLSQVWKEDLKSGKLLTSMLDL 238
Query: 478 FGEGILSFIPAPEMSLFL 495
FGE +L FIPAPE+S+FL
Sbjct: 239 FGESMLCFIPAPELSMFL 256
>gi|430814588|emb|CCJ28196.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 420
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 224/354 (63%), Gaps = 24/354 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRH++RT LT D+ AL++ NVEP+YG+ + P+RF ++ G L+YL+D DVEF
Sbjct: 4 MRHAKRTILTVSDISHALRVLNVEPLYGYHAFRPVRFGESLLEQGQPPLYYLEDDDVEFD 63
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNG-----TNNEQKDGLP 112
VI APLP+ P D S HWLAIEGVQP IP+N V + S NN P
Sbjct: 64 KVIHAPLPKVPRDISYSVHWLAIEGVQPAIPQNPSVSDTSVSSKKGFQVINNNSWTLSGP 123
Query: 113 ---VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTY 169
VE+K VKH++S+EL+LYF++I + ++ L AL SL DSGLH L+PYF
Sbjct: 124 STGVEVKHLVKHVISKELRLYFERINSAILDENNERLRLAALASLRLDSGLHQLLPYFVS 183
Query: 170 FVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPY--LHQLMPSVVTCLVAKRLG-NR 226
VA++++ L N +L +M+V W L NP++ IEPY LHQ++PS++TCLVAKRLG N
Sbjct: 184 LVAEKITHNLKNLFILNMMMQVTWALFDNPNLFIEPYVSLHQIIPSILTCLVAKRLGENA 243
Query: 227 LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
+ +H+ LRD +A L+ IC+R+G VY+TL+ R+T+TLL A LD K+ T HYGA+ GLA
Sbjct: 244 ASQDHYALRDLSASLLGLICQRFGDVYHTLKPRITRTLLKAFLDNKKPFTTHYGAIIGLA 303
Query: 287 ALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEV----KRHEAWRVYGALLQA 336
+G V+R+L++PN+ Y E+L++ N K+ EA + ALL +
Sbjct: 304 TMGKEVIRVLIMPNIKIY------ELLIKDDINSAELTFKKMEATKCLEALLNS 351
>gi|213409241|ref|XP_002175391.1| transcription initiation factor TFIID subunit 6
[Schizosaccharomyces japonicus yFS275]
gi|212003438|gb|EEB09098.1| transcription initiation factor TFIID subunit 6
[Schizosaccharomyces japonicus yFS275]
Length = 458
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 160/358 (44%), Positives = 221/358 (61%), Gaps = 26/358 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R LT D+ AL+ NVEP+YGF S P+ F A G L+YLDD++++F+
Sbjct: 50 MRHSKRRVLTNSDISAALRTLNVEPLYGFNSNEPVVFNEAPLGPGQSSLYYLDDEEIDFE 109
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN--------------APVQAIAAPSNGT 103
VI APLP+ P D + HWLAIEGVQP IP+N A A S G
Sbjct: 110 KVINAPLPKIPRDITYTAHWLAIEGVQPTIPQNPTTADHSGAGGDWSAKAGAAGVKSAG- 168
Query: 104 NNEQKDGLP----VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSG 159
D P VE+K V+H+LS+ELQLYF++I +S S++ L AL SL TD G
Sbjct: 169 GKSTSDVFPSADNVEVKPLVRHVLSKELQLYFERIANALLSDSNAELRNAALSSLRTDPG 228
Query: 160 LHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLV 219
LH L+PYF F++D V++ L+N+++L LM++ W+LL NP++ +EPY+HQL+P ++TC+V
Sbjct: 229 LHQLLPYFIIFLSDSVTQNLSNHNVLKTLMQMAWSLLDNPNLFVEPYIHQLIPPILTCMV 288
Query: 220 AKRLG-NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQH 278
AK LG L H+ELRDF A L+ IC R+G VY TL+ R+T+TLL A LD + T H
Sbjct: 289 AKYLGPGGLDTEHYELRDFAAYLLGIICDRFGDVYYTLKPRVTRTLLKAFLDNTKPFTTH 348
Query: 279 YGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
YGA+ GL +G +R+L++PN+ Y L+ LEK + ++ EA R AL A
Sbjct: 349 YGAIIGLKTMGKEAIRVLIVPNIKVYELLVIKA--LEKGTPQ-EKQEANRCINALNDA 403
>gi|302851795|ref|XP_002957420.1| hypothetical protein VOLCADRAFT_68197 [Volvox carteri f.
nagariensis]
gi|300257224|gb|EFJ41475.1| hypothetical protein VOLCADRAFT_68197 [Volvox carteri f.
nagariensis]
Length = 463
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 226/353 (64%), Gaps = 11/353 (3%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGF-ASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
RH +RT LT D++ A++LRN+EP+YGF + P +F RA G+ D++++ D V + +
Sbjct: 49 RHCKRTKLTIQDINNAMRLRNLEPMYGFLGNNDPAKFVRATGHSDVYFVHDAMVPLEQIT 108
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTN------NEQKDGLPVE 114
APLP+AP T+++ HWL IEGVQP ENA V+ P+ +
Sbjct: 109 YAPLPKAPNHTTVMPHWLFIEGVQPHTEENAAVERPPPPAKRPRLAAAGGPGTAGSVSER 168
Query: 115 IKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQAL-VSLATD-SGLHPLVPYFTYFVA 172
++LPV+HILS E+Q +++ + + + +F++++ S + D + + L+PY T FV
Sbjct: 169 VQLPVQHILSDEMQRLLEQVRAVCRGNAIAFVFRRSIPGSCSGDRACMQQLLPYLTKFVC 228
Query: 173 DEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHW 232
DEV+ GL + L ++RV+ LL NP +Q+EPYLH LMP ++TC +AK LG +HW
Sbjct: 229 DEVAGGLRHLPRLQMVLRVMQALLLNPSVQLEPYLHNLMPPLLTCCLAKALGPGPRCDHW 288
Query: 233 ELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNV 292
LRD LVAA+C R+G + +L+ +++K LL ALLD + L HYGAV GLAALGP
Sbjct: 289 RLRDSAGSLVAAVCGRFGEPFYSLKVKVSKQLLRALLDGSKPLPSHYGAVMGLAALGPAT 348
Query: 293 VRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRL 345
VRLLLLP+L PYL+ L+P LE ++ ++++EA RVYGALL AAG +YDRL
Sbjct: 349 VRLLLLPHLEPYLAKLQPA--LEARQEGMRQYEATRVYGALLTAAGTAMYDRL 399
>gi|330846367|ref|XP_003295007.1| TATA-binding protein-associated-factor [Dictyostelium purpureum]
gi|325074402|gb|EGC28467.1| TATA-binding protein-associated-factor [Dictyostelium purpureum]
Length = 518
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 238/395 (60%), Gaps = 59/395 (14%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFAS----GGPLRFRRAI-GYRDLFYLDDKDVE 55
M+HS+R L+ DD++ AL L+NVE +YG+ S L+F++ + ++YL+DK++
Sbjct: 48 MKHSKRDHLSCDDINNALGLKNVEVLYGYNSCVSDNSLLKFQKTTTSTQAIYYLNDKELT 107
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-APVQ------------------AI 96
F++V+ PLP+ P + ++ HWLA+EGVQP+IP+N +P + +
Sbjct: 108 FQEVMNQPLPKVPREPTLSAHWLALEGVQPLIPQNPSPYEIEEHFKNLNKKFKSEKANQL 167
Query: 97 AAPS----NGTN------------------NEQKDGLPVEIKLP----------VKHILS 124
AA S NGTN +Q+ +P LP VKHILS
Sbjct: 168 AASSSNTANGTNVPPSTNNILSKPNIATQQQKQEPSIPGIHTLPSVTTTVVKPTVKHILS 227
Query: 125 RELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL 184
+E+Q++++KIT ++ + LF A+ SL DS LH L+PYF F++ +V++ L N +L
Sbjct: 228 KEIQMFYEKITN-SIKGDNQKLFNAAIHSLKNDSSLHQLLPYFINFISVQVTQNLTNLNL 286
Query: 185 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAA 244
L LM++ +L++ H++ E YLHQLMP ++TCLV K+L DNHWELRDF+A+LV
Sbjct: 287 LMKLMKMSQAILESKHLKPELYLHQLMPPILTCLVGKKLCTSPMDNHWELRDFSAQLVTF 346
Query: 245 ICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPY 304
IC+++G Y++LQ+R+TKTL+ L D + LT HYGAV GL+ LG NV++ LLLP + Y
Sbjct: 347 ICRKFGDSYSSLQSRITKTLVQTLHDTTKPLTTHYGAVVGLSGLGKNVIQFLLLPYISTY 406
Query: 305 LSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQ 339
LLEPE L N +K EA +V A+++A G+
Sbjct: 407 YKLLEPE--LNNNSNPLKSMEANKVLNAIIEATGK 439
>gi|19075428|ref|NP_587928.1| histone H4-like TAF Taf6, SAGA complex subunit [Schizosaccharomyces
pombe 972h-]
gi|74626857|sp|O74462.1|TAF6_SCHPO RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=TBP-associated factor 50 kDa;
Short=TAFII-50; Short=TAFII50; AltName:
Full=TBP-associated factor 6
gi|3560272|emb|CAA20756.1| histone H4-like TAF Taf6, SAGA complex subunit [Schizosaccharomyces
pombe]
Length = 452
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 152/347 (43%), Positives = 218/347 (62%), Gaps = 24/347 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
M HS+RT LT+ D+ AL+ NVEP+YGF + PL F A G L+YLDD++V+F+
Sbjct: 50 MVHSKRTVLTSADISSALRTLNVEPLYGFNNSRPLEFHEAAVGAGQNSLYYLDDEEVDFE 109
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-APVQAIAA--PSNGTNN--------- 105
+I APLP+ P + S HWLAIEGVQP IP+N P S GT+
Sbjct: 110 KIINAPLPKVPRNISYSAHWLAIEGVQPAIPQNPTPSDHTVGEWASKGTSGVMPGASTAA 169
Query: 106 -EQKDGLP----VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGL 160
E ++G+ VEIK V+H+LS+ELQLYF++IT + ++ L AL SL D GL
Sbjct: 170 KEARNGVTSMDNVEIKPLVRHVLSKELQLYFERITSALLDETNVELRDAALSSLRDDPGL 229
Query: 161 HPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVA 220
H L+PYF F++D V+R L N +L LM + W LL NP++ +EPY+ QLMPS++TCLVA
Sbjct: 230 HQLLPYFIMFLSDSVTRNLGNLVVLTTLMHMAWALLDNPNLFVEPYVQQLMPSILTCLVA 289
Query: 221 KRLGNRLADN-HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHY 279
KRLG+ ++ H+ LRD A L+ +C R+G+VY TL+ R+T+T L A LD + + HY
Sbjct: 290 KRLGSDPNNHEHYALRDLAAFLLGIVCDRFGNVYYTLKPRVTRTALKAFLDNTKPYSTHY 349
Query: 280 GAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEA 326
GA++GL +G +R+L++PN+ Y L+ + ++ NE + +EA
Sbjct: 350 GAIKGLKTMGKEAIRVLVVPNIKVYEVLVRKTL---EKGNEEEIYEA 393
>gi|428178631|gb|EKX47505.1| transcription initiation factor TFIID, subunit TAF6 [Guillardia
theta CCMP2712]
Length = 390
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 149/342 (43%), Positives = 212/342 (61%), Gaps = 7/342 (2%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRF--RRAIGYRDLFYLDDKDVEFKDV 59
RHSRR LT D++ AL++RNVEP+YGF P+ + ++ G +++K++EF ++
Sbjct: 49 RHSRRRKLTPADINNALRVRNVEPLYGFTFPEPIVYTTKQGEGGGSQIIIEEKELEFDEL 108
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
+ APLP+AP++ ++ HWLAI+GVQP+IPEN + + + G + KD E V
Sbjct: 109 LSAPLPKAPVEVTLRAHWLAIDGVQPLIPENPIPENLDVAAAGKKRKVKDSETSEKDPMV 168
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
+ +LS+ELQLY++ +T + S +L AL SL D GL L+PYF F+ DEV R L
Sbjct: 169 QDVLSQELQLYYENVTSAVIQGSPHIL-SAALSSLRKDPGLQALLPYFAQFITDEVKRSL 227
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
+ +L AL+ + +L N + +EP LH+LMP+V+TC+V K+L D HW LRD A
Sbjct: 228 KDLPILNALLSMTLAILSNAQLHVEPRLHELMPAVMTCMVGKQLCKSSLDPHWNLRDRAA 287
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
KL+ I RY Y+TLQ R+T TLL+A L+P + LT HYGA+ GLAALGP + L++P
Sbjct: 288 KLLNFIVDRYAAPYSTLQQRITNTLLHAFLEPTKPLTTHYGAIAGLAALGPQTMNQLIVP 347
Query: 300 NLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCI 341
N Y SLL+ N +KR EA RV GALL A G+
Sbjct: 348 NAPAYASLLQKYTF----DNHIKRFEAIRVRGALLDAVGKSF 385
>gi|145353498|ref|XP_001421048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581284|gb|ABO99341.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 383
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/337 (44%), Positives = 215/337 (63%), Gaps = 33/337 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASG-GPLRFRRAIGYRDLFYLDDKDVEFKDV 59
MR S+RTTL+ +DV+ AL+LRN EP+YGF +G +++ D+FY++D++++ +++
Sbjct: 51 MRASKRTTLSAEDVNAALRLRNCEPLYGFGAGTSDYEYKQTREDPDVFYVEDREIDMREL 110
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV-------------------QAIAAPS 100
+ LPR P++ ++V HWLA+EGVQP+IPEN V +A+ A
Sbjct: 111 LTRKLPRPPIEVNLVPHWLAVEGVQPMIPENPMVPAAEPVAIEPPRGMKRPRPRAMGAKE 170
Query: 101 NGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITEL--AVSRSDSV-----LFKQALVS 153
NG + + LPV V H LSRELQ YFDK+T L R+D+ L AL S
Sbjct: 171 NGGDPDAGGLLPV-----VSHTLSRELQFYFDKVTALIRQAGRADASDREVELLSTALRS 225
Query: 154 LATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPS 213
L+ D GLH L+PYFT F+ +E ++ L + L L++++ L+ NP I +E YLHQLMPS
Sbjct: 226 LSADVGLHNLMPYFTQFITEETTQNLRDLPRLRVLIQMIRALISNPDINVELYLHQLMPS 285
Query: 214 VVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
VVTC+VAKRL L ++HW LRD A +A IC ++G Y +++ R+T+TLL ALLD K
Sbjct: 286 VVTCVVAKRLCQNLDEDHWSLRDDAAYTMAFICGKFGDAYPSIRPRITRTLLRALLDTK- 344
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEP 310
+T HYGA++GL ALGP VVR ++PNL YL+ LEP
Sbjct: 345 PMTTHYGAIRGLHALGPKVVRETVMPNLRSYLNTLEP 381
>gi|308810433|ref|XP_003082525.1| putative TAF6 (ISS) [Ostreococcus tauri]
gi|116060994|emb|CAL56382.1| putative TAF6 (ISS), partial [Ostreococcus tauri]
Length = 563
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 166/405 (40%), Positives = 225/405 (55%), Gaps = 76/405 (18%)
Query: 1 MRHSRRTTLTTD---------------DVDEALKLRNVEPVYGFASGGPLRFRRAIGYRD 45
MRH +R TL + + ALKLRN EP+YGF +G
Sbjct: 68 MRHCKRETLRAEVRERWRDAVRAVNDGRCNAALKLRNCEPLYGFGTG----------TSS 117
Query: 46 LFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN--------APVQ--- 94
+FYLD+++++ +++I LPR P+D ++V HWLA+EGVQP+IPEN P+Q
Sbjct: 118 VFYLDEREIDVRELITKRLPRPPVDVNLVPHWLAVEGVQPMIPENPMPLAPEPKPLQPPL 177
Query: 95 ---AIAAPSNGTNNEQKDGL-PVEIKLPVKHILSRELQLYFDKITELA-------VSRSD 143
A + G + GL PV V H+L++ELQ YFDK+T L S D
Sbjct: 178 GSKRPRARAEGGGDPDAGGLQPV-----VSHVLTKELQYYFDKVTALVRGAGRAEASDRD 232
Query: 144 SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQI 203
L +AL SL D GLH L+PYFT F+ +E + L + L L++++ L+ NP I +
Sbjct: 233 VDLLARALRSLGEDVGLHNLMPYFTQFITEETTASLRDLPRLRVLIQMIRALISNPDINV 292
Query: 204 EPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKT 263
E YLHQLMPSVVTC+VAKRL L ++HW LRD A VA +C ++G Y ++Q R+T+T
Sbjct: 293 ELYLHQLMPSVVTCVVAKRLCQNLDEDHWSLRDDAANTVAFVCAKFGAAYPSIQPRITRT 352
Query: 264 LLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS-LLEP------------ 310
LL ALLD K LT HYGAV+GL ALGP VVR ++PNL Y++ LEP
Sbjct: 353 LLRALLDTK-PLTTHYGAVRGLQALGPKVVRETIMPNLRAYMTNTLEPALEAPKPLDDSE 411
Query: 311 ---------EMLLEKQKNEVKRH-EAWRVYGALLQAAGQCIYDRL 345
+ + K K V RH +A RV GAL +A G C+ D +
Sbjct: 412 LKNASEEDRNIAVAKAKLAVLRHTDAQRVMGALQEAVGACLRDEI 456
>gi|406608131|emb|CCH40565.1| Transcription initiation factor TFIID subunit 6 [Wickerhamomyces
ciferrii]
Length = 481
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 140/333 (42%), Positives = 210/333 (63%), Gaps = 32/333 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI--GYRDLFYLDDKDVEFKD 58
MRHS+R TLTT+DV+++LK+ NVEP+YG+ PL F+ A+ + L+Y+DD++V+F+
Sbjct: 66 MRHSKRKTLTTNDVEKSLKVLNVEPLYGYDVSRPLNFKEALVGNGQTLYYVDDEEVDFEK 125
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---------APVQ--AIAAPSNGTN--- 104
+I PLP+ P ++ HWL+IEGVQP IP+N PV AI NG +
Sbjct: 126 LINQPLPKVPRSSTFTAHWLSIEGVQPAIPQNPLESEIRSQLPVSRGAITNVLNGNDAVT 185
Query: 105 ---------NEQKDGLP---VEIKLPVKHILSRELQLYFDKITELAVSRSDSV----LFK 148
N G+ EIK VKH+LS+ELQLYFDK+ + ++ D+ L +
Sbjct: 186 SNNTTGSNTNAGSTGVSAKDTEIKPLVKHVLSKELQLYFDKVIQALTNQEDNEEVLHLKQ 245
Query: 149 QALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLH 208
AL SL +D GLH LVPYF F++++++ NN +LL ++ V+++LL N +I ++PY+H
Sbjct: 246 AALTSLRSDPGLHQLVPYFVQFISEQITHNSNNIALLSTMLEVIYSLLSNSNIFLDPYIH 305
Query: 209 QLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
LMP ++T L+AKR+G++ D H+ +RDF + L+ +CK YG Y TL+ R+T+TLL
Sbjct: 306 ALMPCILTLLLAKRIGSQNDDEHFAVRDFASSLLEHVCKHYGKAYTTLKPRVTRTLLKTF 365
Query: 269 LDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
LD + + YGA+ GL LG VVR+++L NL
Sbjct: 366 LDSNKPVGTLYGAIIGLQKLGEEVVRIIILGNL 398
>gi|303272643|ref|XP_003055683.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463657|gb|EEH60935.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 548
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 150/366 (40%), Positives = 223/366 (60%), Gaps = 31/366 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGP-LRFRRAIGYRDLFYLDDKDVEFKDV 59
MRHS+R L+T+DV+ +LK++ VE +YGF + P + F+ G+ D F K++E KD+
Sbjct: 57 MRHSKRVQLSTEDVNSSLKMKKVEALYGFPANAPAIAFKEVPGHPDFFTQASKEIELKDI 116
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE--IKL 117
+ LPR P+ ++V HWLA++GVQP+IPEN P+ P + + + V+ +
Sbjct: 117 LAMKLPRPPIAVNVVPHWLAVDGVQPLIPENPPL----GPGENLRPDLEADIDVDERARA 172
Query: 118 PVKHILSRELQLYFDKITELAVSRS-----DSVLFKQALVSLATDSGLHPLVPYFTYFVA 172
+ LS+ELQLYFD++T AV R ++ + + AL SLATD+GLH L+PY FV
Sbjct: 173 MFRAPLSKELQLYFDRVT--AVIRGGGAGEEAPMLRAALASLATDAGLHQLMPYLVQFVQ 230
Query: 173 DEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHW 232
EV++ L L AL ++ NP++ +E YLHQ MPS+VTC+VAKRL +NHW
Sbjct: 231 TEVAKSLRRLPKLRALTAATLAIVANPNVHVELYLHQFMPSIVTCMVAKRLCASPDENHW 290
Query: 233 ELRDFTAKLVAAICKRYGHVYNTLQTR----LTKTLLNALLDPKRALTQHYGAVQGLAAL 288
LR+ A+ + +C+++G Y T+Q R +T+TL ALLD + L+ HYGA+ GL AL
Sbjct: 291 ALREQAAETMNFVCEKFGREYPTIQARSIHWITRTLSKALLDETKPLSTHYGAIVGLHAL 350
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEM---------LLEKQKNE----VKRHEAWRVYGALLQ 335
GP VVR+LL+PN+ Y+S LEP + E++K +K +EA +V AL +
Sbjct: 351 GPRVVRMLLVPNIRRYMSRLEPFLEPPTGSGGGADEEKKTHASKTLKYNEAVKVKDALRR 410
Query: 336 AAGQCI 341
A G C+
Sbjct: 411 AVGLCL 416
>gi|320168746|gb|EFW45645.1| transcription initiation factor TFIID complex 60 kDa subunit
[Capsaspora owczarzaki ATCC 30864]
Length = 541
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 162/416 (38%), Positives = 226/416 (54%), Gaps = 60/416 (14%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGF-ASGGPLRFRRAIGYRDLFYLDDKDVEFKDV 59
M HSRR LTTDDV+ AL+ ++EP+YG+ AS PL R+ F +D++V+ +
Sbjct: 44 MYHSRRHVLTTDDVNSALRAMDMEPLYGYGASAPPLVKRKNAPNSGQF--EDEEVDLAAL 101
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV-------------------------- 93
+ APLP+ S HWLAIEGVQP IP+N P+
Sbjct: 102 VAAPLPKVAPPVSYAAHWLAIEGVQPAIPQNPPMFGENRPMLNRTDKNLTVVNAQGKPTT 161
Query: 94 QAIAA-----PSNGTNNEQKDGLPV-----EIKLPVKHILSRELQLYFDKITELAVSRSD 143
A+ A P + T P EIK V+H LS+ELQ+Y++++ + +D
Sbjct: 162 AAVGAGSGVAPPSSTTPLVAGTFPAVRSLHEIKHLVEHTLSKELQIYYERLVDAITGVND 221
Query: 144 SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQI 203
+ + AL+SLA D GLH LVPY + F+AD++ + LNN +L +M + L+ NP + +
Sbjct: 222 NA-RQAALISLAADPGLHQLVPYLSQFIADKILQNLNNLPMLMNIMLMTKALVSNPELHL 280
Query: 204 EPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKT 263
EPY+HQLMP+V+TC++ KRL R +NHW LR A++V+ IC+RY +N LQ R KT
Sbjct: 281 EPYIHQLMPAVLTCVLGKRLCQRHTENHWALRVLAAQVVSIICRRYSSSHNQLQPRTAKT 340
Query: 264 LLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE-------PEMLLEK 316
LL LDP + LT H+GAV GL LG + L+LPN Y++LL PE +L
Sbjct: 341 LLKVFLDPHKPLTSHFGAVVGLEHLGAETISALILPNFASYVALLALKRDPSIPENVL-- 398
Query: 317 QKNEVKRHEAWRVYGALLQAAGQCIYDR------LKIFPPLSSLPARSVWKTNGIV 366
R EA RV+GALL A G + R +F PL+ L A V K +V
Sbjct: 399 ----TVREEAERVHGALLSAVGNLLKHRGVSSTPSGLFDPLTEL-APDVEKYYAVV 449
>gi|410915422|ref|XP_003971186.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Takifugu rubripes]
Length = 636
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 141/332 (42%), Positives = 199/332 (59%), Gaps = 32/332 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MRH +R LTT D+D ALKL+NVEP+YGF S + FR A G R+L + ++K+V+ D+
Sbjct: 58 MRHGKRRKLTTSDIDNALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------------------------- 92
I PLPR PLD S+ HWL+IEG+QP IPEN P
Sbjct: 118 INTPLPRVPLDVSLKAHWLSIEGMQPAIPENPPPVPKEQQKVESTEPLKVVKPGQEEEGT 177
Query: 93 VQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALV 152
+Q + + + KD + +K H LS E QLY+ +ITE V ++ +AL
Sbjct: 178 IQGKTQGATAADGKGKDKGLIRLKPRSTHELSVEQQLYYKEITEACVGSCEAKR-AEALQ 236
Query: 153 SLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQL 210
S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E YLH+L
Sbjct: 237 SIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHEL 296
Query: 211 MPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 269
+P+VVTC+V+K+L R DNHW LRDF A+L+A CK + N +Q+R+TKT +LL
Sbjct: 297 IPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSLL 356
Query: 270 DPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
D K T YG + GLA LGP+V++ L+LP L
Sbjct: 357 DDKTQWTTRYGCIAGLAELGPDVIKTLILPRL 388
>gi|47222523|emb|CAG02888.1| unnamed protein product [Tetraodon nigroviridis]
Length = 599
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/333 (42%), Positives = 200/333 (60%), Gaps = 33/333 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MRH +R LTT D+D ALKL+NVEP+YGF S + FR A G R+L + ++K+V+ D+
Sbjct: 58 MRHGKRRKLTTSDIDNALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------------------------- 92
I PLPR PLD S+ HWL+IEG+QP IPEN P
Sbjct: 118 INTPLPRVPLDVSLKAHWLSIEGMQPAIPENPPPVPKEQQKVESTEPLKVVKPGQEEDGT 177
Query: 93 VQAIAAPSNGTNNE-QKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQAL 151
+Q A + + + QK P ++ H LS E QLY+ +ITE V ++ +AL
Sbjct: 178 IQGKAQGATAADGKGQKGEGPDTVEAAQTHELSVEQQLYYKEITEACVGSCEA-KRAEAL 236
Query: 152 VSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 209
S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E YLH+
Sbjct: 237 QSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHE 296
Query: 210 LMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
L+P+VVTC+V+K+L R DNHW LRDF A+L+A CK + N +Q+R+TKT +L
Sbjct: 297 LIPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSL 356
Query: 269 LDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
LD K T YG + GLA LGP+V++ L+LP L
Sbjct: 357 LDDKTQWTTRYGCIAGLAELGPDVIKTLILPRL 389
>gi|452840986|gb|EME42923.1| hypothetical protein DOTSEDRAFT_72382 [Dothistroma septosporum
NZE10]
Length = 447
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/348 (43%), Positives = 215/348 (61%), Gaps = 18/348 (5%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH++RTTLTT D+ +AL++ +VEP+YG+ S PLRF A IG + LFY++D++V+F+
Sbjct: 48 MRHAKRTTLTTQDISQALRVLDVEPLYGYESTRPLRFGEASIGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQA------IAAPSNGTNN--EQKDG 110
+I APLP+ P + S HWLA+EGVQP IP+N P QA + A G N
Sbjct: 108 LINAPLPKVPREISFTAHWLAVEGVQPSIPQN-PTQADQRNQELQAKGQGANTLAAMSGN 166
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V++K VKH+LS+ELQLYF++I + + A SL TD GLH LVPYF F
Sbjct: 167 DNVQVKNLVKHVLSKELQLYFERICAAILDEGNEEYRAAAFSSLQTDPGLHQLVPYFIQF 226
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLAD 229
VAD+V+ L + +L M++V LL+NP + I PY+ L+PSV+TCLV K LG + D
Sbjct: 227 VADKVTHNLKSLFILTQSMQLVAALLENPSLYIAPYVPSLVPSVLTCLVGKHLGPSNAGD 286
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL- 288
H+ LRD+ + L+++I ++YG +TL+ R+ ++ L LD + L HYGAV GL +
Sbjct: 287 IHFSLRDYASSLLSSIARKYGPSSSTLKPRIARSCLKHFLDSHKPLGTHYGAVLGLTMIA 346
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
G VR L+LPNL Y L E K++ KR +A +V A+++
Sbjct: 347 GGAGVRSLILPNLKAY-----DVHLSECIKDDAKRADAEKVVEAIMRG 389
>gi|432898459|ref|XP_004076512.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Oryzias latipes]
Length = 638
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 198/332 (59%), Gaps = 32/332 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H +R LTT D+D ALKL+NVEP+YGF S + FR A G R+L + ++K+V+ D+
Sbjct: 58 MHHGKRRKLTTSDIDNALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------------------------- 92
I PLPR PLD S+ HWL+IEGVQP IPEN P
Sbjct: 118 INTPLPRVPLDVSLKAHWLSIEGVQPSIPENPPPATKEQQKTESTEPLKVVKPGQEEEGA 177
Query: 93 VQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALV 152
+Q + + + K+ + +K H LS E QLY+ +ITE V ++ +AL
Sbjct: 178 IQGKGQGATAPDGKGKEKGSIRLKPRSTHELSVEQQLYYKEITEACVGSCEAK-RAEALQ 236
Query: 153 SLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQL 210
S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E YLH+L
Sbjct: 237 SIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHEL 296
Query: 211 MPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 269
+P+VVTC+V+K+L R DNHW LRDF A+L+A CK + N +Q+R+TKTL + L
Sbjct: 297 IPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQCCKTFSTTTNNIQSRITKTLTKSWL 356
Query: 270 DPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
D K T YG + GLA LGP+V++ L+LP L
Sbjct: 357 DEKTQWTARYGCIAGLAELGPDVIKTLILPRL 388
>gi|384249979|gb|EIE23459.1| DUF1546-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 569
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 212/373 (56%), Gaps = 40/373 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+R TL+T+D++ AL L EP+YG+ S P F A G RD F++ D + ++V+
Sbjct: 48 MRHSKRHTLSTEDINSALILNLKEPIYGYGSKVPASFSTAQGLRDTFFVQDPLCDIQEVL 107
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQ-------------------------- 94
PLPR P++ + HWLAIEG QP ENA ++
Sbjct: 108 AQPLPRCPVEVGTLPHWLAIEGKQPATAENAVIERRKPTAKRTRTAAQLDSTPGMQPCKN 167
Query: 95 -------AIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSV-- 145
+ A S+ +K+ + PV+H+LS+EL LY D++ L + D +
Sbjct: 168 SSFKMFSTVPAASSSGRGSEKEERAAPVNGPVEHVLSQELLLYLDRVKGLL--QGDGIGG 225
Query: 146 --LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQI 203
L L SLA D GL PL+PY V++E+ + L + L L++VV LLQN H+ +
Sbjct: 226 QHLEVGLLTSLALDPGLSPLLPYLAQLVSEEIQKSLKSLRRLRLLLKVVRALLQNAHMAL 285
Query: 204 EPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKT 263
E +LHQL+P +TCLVAK LG A++HW LRD A V A+ RYG Y +QTR+++
Sbjct: 286 EGHLHQLIPVTLTCLVAKNLGGSPAEDHWSLRDAAAATVGAVIARYGADYPDVQTRISRQ 345
Query: 264 LLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKR 323
LL A LD R L HYGAV+GLAA+GP VVRLLL+P++ Y +LL+ + L + + V+R
Sbjct: 346 LLTAFLDSARPLATHYGAVRGLAAMGPRVVRLLLVPHMPAYSALLD-KALTGGRPSSVRR 404
Query: 324 HEAWRVYGALLQA 336
EA RV ALL A
Sbjct: 405 LEAERVRSALLSA 417
>gi|398393594|ref|XP_003850256.1| hypothetical protein MYCGRDRAFT_75105 [Zymoseptoria tritici IPO323]
gi|339470134|gb|EGP85232.1| hypothetical protein MYCGRDRAFT_75105 [Zymoseptoria tritici IPO323]
Length = 449
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 213/350 (60%), Gaps = 20/350 (5%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH++RTTLTT D+ +AL+L VEP+YG+ S PLRF A IG + LFY++D++V+F+
Sbjct: 48 MRHAKRTTLTTQDISQALRLLEVEPLYGYESTRPLRFGEASIGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQA------IAAPSNGTNN--EQKDG 110
+I APLP+ P + S HWLA+EGVQP IP+N P QA +AA G N
Sbjct: 108 LINAPLPKVPREISFTAHWLAVEGVQPSIPQN-PTQADQRNQELAAKGQGANTLAAVSGN 166
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKH+LS+ELQLYF++I + + AL SL TD G+H LVPYF F
Sbjct: 167 DNVAVKPLVKHVLSKELQLYFERICSAILDELNEEYRTAALASLQTDPGIHQLVPYFIQF 226
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN 230
VAD+++ L + +L ++++ LL+N + I PY+ ++PSV+TC+V K LG+ AD
Sbjct: 227 VADKITHNLKSLFILTQSLQLINALLENRSLFIAPYVPSIIPSVLTCVVGKHLGSVSADG 286
Query: 231 ---HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 287
H+ LRD+ + +++ I ++YG +TL+ R+ ++ L LD + HYGAV GL
Sbjct: 287 TTVHFSLRDYASSILSGIARKYGSSSSTLKPRIARSCLKHFLDSHKPFGTHYGAVLGLTM 346
Query: 288 L-GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
+ G VR L+LPNL Y E L K+E K +A V GA++QA
Sbjct: 347 IAGAAGVRSLILPNLKSY-----DEHLRGGLKDESKSEQAEYVVGAIMQA 391
>gi|449298254|gb|EMC94271.1| hypothetical protein BAUCODRAFT_227564 [Baudoinia compniacensis
UAMH 10762]
Length = 452
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 145/349 (41%), Positives = 211/349 (60%), Gaps = 18/349 (5%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH++RTTLTT DV +AL+L +VEP+YG+ S PLRF A IG + LFY++D++V+F+
Sbjct: 48 MRHAKRTTLTTQDVSQALRLLDVEPLYGYESTRPLRFGEASIGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-------APVQAIAAPSNGTNNEQKDGL 111
+I APLPR P + S HWLA+EGVQP IP+N A + A + +N T
Sbjct: 108 LINAPLPRVPREMSFTAHWLAVEGVQPSIPQNPLTDPRSAELAAKGSGANSTLAAISGND 167
Query: 112 PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFV 171
V +K VKH+LS+ELQLYF++I + + A VSL TD+GLH LVPYF F
Sbjct: 168 NVSVKPLVKHVLSKELQLYFERICSAVLDEGNDEYRSAAFVSLRTDTGLHQLVPYFVQFA 227
Query: 172 ADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN- 230
AD+V+ L + +L M+++ LL N + + PY+ ++PSV+TCL+ K LG+ D
Sbjct: 228 ADKVTHNLKSIFVLSQTMQLLDALLDNKSLYLAPYVPGIIPSVLTCLIGKHLGSPAQDGA 287
Query: 231 --HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
H+ LRD+ A L++ I ++Y +TL+ R+ ++ L + LD + HYGA+ GL +
Sbjct: 288 TTHFALRDYAASLLSKIARQYASSSSTLKPRIARSCLKSFLDSHKPYGTHYGAILGLTMI 347
Query: 289 -GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
G VR L+LPNL Y LLE ++ K+ +A V AL++A
Sbjct: 348 AGAEGVRALILPNLKAY-----DMHLLEGMNDDSKKEQAEYVVQALMRA 391
>gi|452982675|gb|EME82434.1| hypothetical protein MYCFIDRAFT_154945 [Pseudocercospora fijiensis
CIRAD86]
Length = 449
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 148/351 (42%), Positives = 215/351 (61%), Gaps = 21/351 (5%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IGY-RDLFYLDDKDVEFKD 58
MRH++RTTLTT D+ +AL++ +VEP+YG+ S PLRF A IG + LFY++D++V+F+
Sbjct: 48 MRHAKRTTLTTQDISQALRVLDVEPLYGYDSTRPLRFGEASIGQGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQA------IAAPSNGTN---NEQKD 109
+I APLP+ P + S HWLA+EGVQP IP+N P QA +AA G N
Sbjct: 108 LINAPLPKVPREISFTAHWLAVEGVQPSIPQN-PTQADQRNQELAAKGQGANPTLAAMSG 166
Query: 110 GLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTY 169
V +K VKH+LS+ELQLYFD+I + ++ A SL TD GLH LVPYF
Sbjct: 167 NDNVSVKPLVKHVLSKELQLYFDRICTAIMDENNEDNRLAAFASLRTDPGLHQLVPYFIQ 226
Query: 170 FVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD 229
FVAD+V+ + + +L M+++ +LL NP + I PY+ ++P V+TCLV K LG+ +D
Sbjct: 227 FVADKVTHHMKSLFILTQSMQLLASLLDNPSLYIAPYVPSVIPCVLTCLVGKHLGSANSD 286
Query: 230 N---HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
H+ LRD++A L++ I +++G +TL+ R+ ++ L LD + HYGAV GL
Sbjct: 287 GATTHFSLRDYSASLLSTIARKFGPSSSTLKPRIARSCLKHFLDSHKPFGTHYGAVLGLT 346
Query: 287 AL-GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
+ G + VR L+LPNL Y L E K+E K+ +A V A++ A
Sbjct: 347 FIAGADGVRSLILPNLKAY-----DMHLSEGIKDEAKKEQAEYVVLAIMTA 392
>gi|52218960|ref|NP_001004557.1| transcription initiation factor TFIID subunit 6 [Danio rerio]
gi|51858501|gb|AAH81612.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Danio rerio]
Length = 636
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 200/330 (60%), Gaps = 30/330 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H +R LTT D+D ALKL+NVEP+YGF S + FR A G R+L + ++K+V+ D+
Sbjct: 58 MHHGKRCKLTTGDIDHALKLKNVEPLYGFQSEEFIPFRFASGGGRELHFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------VQAIAAPSNGTNNE-- 106
I PLPR PLD S+ HWL+I+GVQP IPEN P + + A G +E
Sbjct: 118 INTPLPRVPLDVSLKAHWLSIDGVQPAIPENPPSASKEQQKAESTEPLKAVKPGQEDEGF 177
Query: 107 -QKDG---LPVEIKLPVK--------HILSRELQLYFDKITELAVSRSDSVLFKQALVSL 154
Q G + E+K K H LS E QLY+ +ITE V ++ +AL S+
Sbjct: 178 IQAKGQSAVSAEVKGKEKMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKR-AEALQSI 236
Query: 155 ATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMP 212
ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E YLH+L+P
Sbjct: 237 ATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIP 296
Query: 213 SVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP 271
+VVTC+V+K+L R DNHW LRDF A+L+A CK + N +Q+R+TKT ALLD
Sbjct: 297 AVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKALLDE 356
Query: 272 KRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
K T YG + GLA LG +V++ L++P L
Sbjct: 357 KTQWTTRYGCIAGLAELGHDVIKTLIIPRL 386
>gi|326469026|gb|EGD93035.1| transcription initiation factor TFIID subunit 6 [Trichophyton
tonsurans CBS 112818]
Length = 447
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 219/377 (58%), Gaps = 30/377 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RT LTT DV AL++ +VEP+YG+ S PLRF A IG + LFY++D +V+F+
Sbjct: 48 MRHGKRTLLTTQDVSNALRVLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNE-----QKDG 110
+I APLP+ P + S HWLA+EGVQP IP+N A + + S G N
Sbjct: 108 LINAPLPKVPREISFTAHWLAVEGVQPTIPQNPTAADTRHLELVSKGPNANANLAAMSGN 167
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V IK VKHILS ELQLYF+++ + S+ A SL D GLH LVPYF F
Sbjct: 168 ENVNIKPLVKHILSNELQLYFERVCNAFLDESNEEFRNSAFSSLKEDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLAD 229
++++V+ + + +L +M ++ L++NP + I+PY+ L+P V+TCL+ ++LG + A
Sbjct: 228 ISEKVTHNIKDIFVLTQVMHMIEALIRNPTLYIDPYVAPLIPPVLTCLIGRQLGSSNDAV 287
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL- 288
H+ LRD ++ LV I K+Y +TL+ RL +T L LDP + HYGA+ GL ++
Sbjct: 288 EHFALRDLSSSLVGMIAKKYSQSSHTLKPRLARTFLKTFLDPGQTFGAHYGAIIGLQSIG 347
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIF 348
GPNV+R L++PNL Y +L+ + E +++ EA +V G ++
Sbjct: 348 GPNVIRELIIPNLPVYEVVLKDAVTDEG----LRKAEAEKVTGVIIAV------------ 391
Query: 349 PPLSSLPARSVWKTNGI 365
LS++ S+ TNG
Sbjct: 392 --LSTIQDESLAHTNGF 406
>gi|301623978|ref|XP_002941284.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Xenopus (Silurana) tropicalis]
Length = 622
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 204/339 (60%), Gaps = 38/339 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LT +D+D ALKL+NVEP+YGF + L FR A G R+L + ++K+V+ D+
Sbjct: 56 MHVGKRQKLTPNDIDAALKLKNVEPIYGFHAKEFLPFRYASGGGRELHFYEEKEVDLSDI 115
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN--------------APVQAI--------- 96
I PLPR PLD SI HWL+IEGVQP IPEN P++A+
Sbjct: 116 ISTPLPRVPLDVSIKAHWLSIEGVQPAIPENPPPVTKEQQKSEATEPLKAVKPGQEEGGL 175
Query: 97 ------AAPSNGTNNEQK----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVL 146
A + G E+K +G P+++K H LS E QLY+ +ITE V ++
Sbjct: 176 KGKGQGAGAAEGKGKEKKTPILEGAPLKLKPRSIHELSVEQQLYYKEITEACVGSCEAK- 234
Query: 147 FKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIE 204
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E
Sbjct: 235 RAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLE 294
Query: 205 PYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKT 263
YLH+L+P+V+TC+V+++L R DNHW LRDF A+L+A ICK + N +Q+R+TKT
Sbjct: 295 KYLHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKT 354
Query: 264 LLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG 302
+D + T YG++ GLA LGP+VV+ L++P L
Sbjct: 355 FTKTWVDDRTPWTTRYGSIAGLAELGPDVVKTLIVPRLA 393
>gi|121718305|ref|XP_001276165.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus clavatus NRRL 1]
gi|119404363|gb|EAW14739.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus clavatus NRRL 1]
Length = 448
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/346 (41%), Positives = 209/346 (60%), Gaps = 16/346 (4%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRHSRRT LTT DV +AL++ +VEP+YG+ + PLRF A +G + LFY++D++V+F+
Sbjct: 48 MRHSRRTLLTTQDVAQALRVLDVEPLYGYETTRPLRFGEASLGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP-- 112
+I APLP+ P + S HWLA+EGVQP IP+N A + + S G N N +
Sbjct: 108 LINAPLPKVPREISFTAHWLAVEGVQPSIPQNPTAADSRNLELTSKGPNANSTLAAMSGT 167
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKH+LS+ELQLYF+K+ + S SL D GLH LVPYF F
Sbjct: 168 GNVAVKPLVKHVLSKELQLYFEKVCNAFLDESSEEYRTSGYASLREDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLAD 229
++++V+ GL + +L +M + L+QN + ++PY+ L+P ++TCL+ ++L GN
Sbjct: 228 ISEKVTHGLKDIFVLTQVMHMAEALVQNKSLYVDPYVASLVPPILTCLIGRQLGGNTDLS 287
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALG 289
+ LRD A L+ I K+Y H +TL RL ++ L LDP + HYGAV GL A+G
Sbjct: 288 GQFALRDLAASLLGLISKKYSHSSHTLTPRLARSCLKTFLDPSKPFGAHYGAVIGLNAVG 347
Query: 290 P-NVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 334
VR+L+LPNL Y SLL+ M ++ +R EA +V G LL
Sbjct: 348 GVEAVRVLILPNLSTYASLLKDGM----AEDNPRRPEAEKVLGVLL 389
>gi|326480649|gb|EGE04659.1| transcription initiation factor TFIID subunit 6 [Trichophyton
equinum CBS 127.97]
Length = 447
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 219/377 (58%), Gaps = 30/377 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RT LTT DV AL++ +VEP+YG+ S PLRF A IG + LFY++D +V+F+
Sbjct: 48 MRHGKRTLLTTQDVSNALRVLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP------VQAIAAPSNGTNN--EQKDG 110
+I APLP+ P + S HWLA+EGVQP IP+N ++ ++ N N
Sbjct: 108 LINAPLPKVPREISFTAHWLAVEGVQPTIPQNPTATDTRHLELVSKGPNANANLAAMSGN 167
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V IK VKHILS ELQLYF+++ + S+ A SL D GLH LVPYF F
Sbjct: 168 ENVNIKPLVKHILSNELQLYFERVCNAFLDESNEEFRNSAFSSLKEDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLAD 229
++++V+ + + +L +M ++ L++NP + I+PY+ L+P V+TCL+ ++LG + A
Sbjct: 228 ISEKVTHNIKDIFVLTQVMHMIEALIRNPTLYIDPYVAPLIPPVLTCLIGRQLGSSNDAV 287
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL- 288
H+ LRD ++ LV I K+Y +TL+ RL +T L LDP + HYGA+ GL ++
Sbjct: 288 EHFALRDLSSSLVGMIAKKYSQSSHTLKPRLARTFLKTFLDPGQTFGAHYGAIIGLQSIG 347
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIF 348
GPNV+R L++PNL Y +L+ + E +++ EA +V G ++
Sbjct: 348 GPNVIRELIIPNLPVYEVVLKDAVTDEG----LRKAEAEKVTGVIIAV------------ 391
Query: 349 PPLSSLPARSVWKTNGI 365
LS++ S+ TNG
Sbjct: 392 --LSTIQDESLAHTNGF 406
>gi|212535258|ref|XP_002147785.1| transcription initiation factor TFIID complex 60 kDa subunit
[Talaromyces marneffei ATCC 18224]
gi|210070184|gb|EEA24274.1| transcription initiation factor TFIID complex 60 kDa subunit
[Talaromyces marneffei ATCC 18224]
Length = 447
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/321 (42%), Positives = 195/321 (60%), Gaps = 13/321 (4%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH RRT LTT D+ AL++ NVEP+YG+ S PLRF A +G + LFY++D++V+F+
Sbjct: 48 MRHGRRTVLTTQDISHALRVLNVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP------VQAIAAPSNGTNN--EQKDG 110
+I APLP+ P + + HWLA+EGVQP+IP+N ++ +A N N
Sbjct: 108 LINAPLPKVPREVTFTAHWLAVEGVQPLIPQNPTSNESRNLELVAKGPNANPNLAAMSGN 167
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
+K VKHILS+ELQLYF+K+ + S A SL D GLH LVPYF F
Sbjct: 168 QNTAVKPLVKHILSKELQLYFEKVCNAFLDPSSEEYRTSAYSSLREDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLA 228
+A++V+ LNN +L +MR+ L+QN + I+PY+ L+P V+TCLV ++ G N
Sbjct: 228 IAEKVTHSLNNIFVLTQVMRMAEALIQNQFLYIDPYISALVPPVLTCLVGRQFGGSNNEL 287
Query: 229 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
+ LR+ A L+ I K+Y H +TL+ R+ ++ L LDP + HYGA+ GL +L
Sbjct: 288 SEQFALRELAASLLGMISKKYSHASHTLKPRIARSCLKNFLDPAKPFGTHYGAIMGLHSL 347
Query: 289 -GPNVVRLLLLPNLGPYLSLL 308
G +VVR L+LPNL PY LL
Sbjct: 348 GGADVVRELILPNLKPYDKLL 368
>gi|119498819|ref|XP_001266167.1| transcription initiation factor TFIID complex 60 kDa subunit
[Neosartorya fischeri NRRL 181]
gi|119414331|gb|EAW24270.1| transcription initiation factor TFIID complex 60 kDa subunit
[Neosartorya fischeri NRRL 181]
Length = 445
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 206/346 (59%), Gaps = 16/346 (4%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRHSRRT LTT DV +AL++ +VEP+YG+ + PLRF A +G + LFY++D++V+F+
Sbjct: 48 MRHSRRTLLTTQDVAQALRVLDVEPLYGYETTRPLRFGEASLGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN--------APVQAIAAPSNGTNNEQKDG 110
+I APLP+ P + S HWLA+EGVQP IP+N + A +N T
Sbjct: 108 LINAPLPKVPREISFTAHWLAVEGVQPSIPQNPTAADSRNLELTAKGPNANSTLAAMSGT 167
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKH+LS+ELQLYF+K+ + S SL D GLH LVPYF F
Sbjct: 168 GNVAVKPLVKHVLSKELQLYFEKVCNAFLDESSEEYRTSGYASLREDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLAD 229
++++V+ GL + +L +M + L+QN + ++PY+ L+P ++TCL+ ++L GN
Sbjct: 228 ISEKVTHGLKDIFVLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGNADLS 287
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL- 288
+ LRD A L+ I K+Y H +TL RL ++ L LDP + HYGAV GL A+
Sbjct: 288 EQFALRDLAASLLGLISKKYSHSSHTLTPRLARSCLKTFLDPSKPFGAHYGAVIGLNAVG 347
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 334
G VR+L+LPNL Y +LL M ++ +R EA +V GALL
Sbjct: 348 GTEAVRVLILPNLSTYATLLADGM----AEDNPRRPEAEKVLGALL 389
>gi|315049401|ref|XP_003174075.1| transcription initiation factor TFIID subunit 6 [Arthroderma
gypseum CBS 118893]
gi|311342042|gb|EFR01245.1| transcription initiation factor TFIID subunit 6 [Arthroderma
gypseum CBS 118893]
Length = 448
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/376 (38%), Positives = 219/376 (58%), Gaps = 30/376 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RT LTT DV AL++ +VEP+YG+ S PLRF A IG + LFY++D +V+F+
Sbjct: 48 MRHGKRTLLTTQDVSNALRVLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNE-----QKDG 110
+I APLP+ P + S HWLA+EGVQP IP+N A + + S G N
Sbjct: 108 LINAPLPKVPREISFTAHWLAVEGVQPTIPQNPTSADTRHLELVSKGPNANANLAAMSGN 167
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKHILS ELQLYF+++ + S+ A SL D GLH LVPYF F
Sbjct: 168 ENVNVKPLVKHILSNELQLYFERVCNAFLDESNEEFRNSAFSSLKEDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLAD 229
++++V+ + + +L +M ++ L++NP + ++PY+ L+P V+TCL+ ++LG + A
Sbjct: 228 ISEKVTHNIKDIFVLTQVMHMIEALIRNPTLYVDPYVAPLIPPVLTCLIGRQLGSSNDAV 287
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL- 288
H+ LRD ++ LV I K+Y +TL+ RL +T L LDP + HYGA+ GL ++
Sbjct: 288 EHFALRDLSSSLVGMIAKKYSQSSHTLKPRLARTFLKTFLDPGQTFGAHYGAIIGLQSIG 347
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIF 348
GPNV+R L++PNL Y +L+ + E +++ EA +V G ++
Sbjct: 348 GPNVIRELIIPNLPVYEVVLKDAVTDEG----LRKAEAEKVTGVIIAV------------ 391
Query: 349 PPLSSLPARSVWKTNG 364
LS++ S+ TNG
Sbjct: 392 --LSTIQDESLAHTNG 405
>gi|452821588|gb|EME28617.1| transcription initiation factor TFIID subunit D5 [Galdieria
sulphuraria]
Length = 459
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 211/341 (61%), Gaps = 7/341 (2%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MR+S+RT L D++ AL+L N+EP++G+++ +FR L+ LDD V+ K +
Sbjct: 51 MRNSKRTKLLPKDINSALRLENMEPIFGYSAPRRKQFRVVKSCPGLYVLDDDLVDLKRAL 110
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
+ PLP+AP + ++ HWLA+EGVQP I +N P++ + T+ + +PVE P+K
Sbjct: 111 DEPLPKAPFEPALEAHWLAVEGVQPAIWQN-PLRDQLKDAKTTS----ESVPVEALKPLK 165
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
H LS+E QL +D + + + D K L LA G+ LVPYFT ++ +EV N
Sbjct: 166 HALSKEFQLLYDHVISI-LRDEDGEKKKACLRELARQPGIQQLVPYFTLYIHEEVRLYHN 224
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
LF++M++ L+ NP+I IEPYLHQ+MPSV+TC++ K+L + D HW LRD+++
Sbjct: 225 FTERLFSVMQLTRALITNPNIHIEPYLHQVMPSVLTCILGKKLCSSWMDPHWHLRDYSSS 284
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
++ I K +G Y TLQTR+TKTL++ALLD KR L+ YGA+ GL +LG V++ L+P+
Sbjct: 285 VLGFIYKHFGPNYATLQTRVTKTLISALLDEKRPLSTRYGAIVGLVSLGVCEVQICLMPH 344
Query: 301 LGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCI 341
L PYLS L + ++ ++YGAL+ AA C+
Sbjct: 345 L-PYLSQQTEAELHRSDLEDERKLSLAKIYGALILAAHVCL 384
>gi|296412081|ref|XP_002835756.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629546|emb|CAZ79913.1| unnamed protein product [Tuber melanosporum]
Length = 472
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 213/363 (58%), Gaps = 28/363 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH+RRTTL T D+ AL++ +VEP+YG+ S PLRF A +G + +FY++D +V+F+
Sbjct: 48 MRHARRTTLGTQDISNALRVLDVEPLYGYESTRPLRFGEASLGQLQPIFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-APVQAI--------AAPSNGTNNEQKD 109
+I APLP+ P D + HWLAIEGVQP IP+N P +A A SN T +
Sbjct: 108 LINAPLPKVPRDVTFTGHWLAIEGVQPAIPQNPTPSEAARLSETTPKGASSNTTLSAAST 167
Query: 110 GLP-----VEIKLPVKHILSRELQLYFDKI-TELAVSRSDSVLFKQALVSLATDSGLHPL 163
P V IK VKH+LS+ELQLYF++I T + + + AL SL D GLH L
Sbjct: 168 LNPTTNETVTIKPLVKHVLSKELQLYFERISTSITDESTTDTIRNAALASLRKDPGLHQL 227
Query: 164 VPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 223
+PYF F++++ + GL + L +M + LL+N IEPY+ L+P ++TCL+ K L
Sbjct: 228 LPYFVQFISEKTTHGLRSLFTLTQMMSLTHALLENDSFFIEPYVSSLIPPILTCLIGKHL 287
Query: 224 GNRLAD------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQ 277
G+ +D H+ LRD +A L+ +CKR+G +TL+ RLT+T L LDP + L
Sbjct: 288 GSSSSDPHSQTPAHYALRDLSASLLKLVCKRFGDSSHTLKPRLTRTCLKHFLDPAKPLPT 347
Query: 278 HYGAVQGLAALGP-NVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
HYG++ GLAA+G VR+L+LPN Y E + LE + ++ EA AL+
Sbjct: 348 HYGSIIGLAAIGGREAVRVLILPNTKLY----EKVIRLEIEDEGPRKSEAEMCLSALVGV 403
Query: 337 AGQ 339
Q
Sbjct: 404 IKQ 406
>gi|348665951|gb|EGZ05779.1| hypothetical protein PHYSODRAFT_341977 [Phytophthora sojae]
Length = 436
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 140/337 (41%), Positives = 208/337 (61%), Gaps = 3/337 (0%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIE 61
RHSRR L V++AL+ RN+E +YGF++ G +++++ LF+ +++++E +++
Sbjct: 49 RHSRRPQLDPTHVNQALQARNLESLYGFSAPGTVKYKQCEDNDALFFAEEEELELGELLN 108
Query: 62 APLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKH 121
APL + PL + HWLA++GVQP+IPEN V+ + +E V+ K VKH
Sbjct: 109 APLGQIPLHPVLNVHWLAVDGVQPLIPENESVEDDSTCHTSIKDEAFVN-NVDRKPRVKH 167
Query: 122 ILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN 181
+L+ E+QLY+ K+TE AV D L + A SLA D G+H L+PYF+ F+ +EV ++
Sbjct: 168 VLTEEMQLYYTKVTE-AVKSDDFELQRAAFTSLAQDPGIHQLLPYFSRFIYEEVKHSNHD 226
Query: 182 YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKL 241
SLLF+LMR LL N ++ +E YLHQL+P+++TC++ +L AD+HW LR + AKL
Sbjct: 227 LSLLFSLMRACRCLLVNQNLHVELYLHQLIPAILTCVLGTQLCENPADDHWALRKYAAKL 286
Query: 242 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
VA IC+RYG Y +Q R++KT A+ DP + YGA+ G+ LGP V+ LL PNL
Sbjct: 287 VAQICERYGEKYANIQARVSKTYHKAITDPVCPFSTQYGALHGMLFLGPLVMESLLFPNL 346
Query: 302 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAG 338
Y LEP L N V+R EA G L+ A+G
Sbjct: 347 ERYYRRLEP-ALSSSNPNLVERLEAQNCLGILVHASG 382
>gi|70984940|ref|XP_747976.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus fumigatus Af293]
gi|66845604|gb|EAL85938.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus fumigatus Af293]
gi|159126099|gb|EDP51215.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus fumigatus A1163]
Length = 445
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/346 (40%), Positives = 205/346 (59%), Gaps = 16/346 (4%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRHSRRT LTT DV +AL++ +VEP+YG+ + PLRF A +G + LFY++D++V+F+
Sbjct: 48 MRHSRRTLLTTQDVAQALRVLDVEPLYGYETTRPLRFGEASLGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN--------APVQAIAAPSNGTNNEQKDG 110
+I APLP+ P + S HWLA+EGVQP IP+N + A +N T
Sbjct: 108 LINAPLPKVPREISFTAHWLAVEGVQPSIPQNPTAADSRNLELTAKGPNANSTLAAMSGT 167
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKH+LS+ELQLYF+K+ + S SL D GLH LVPYF F
Sbjct: 168 GDVAVKPLVKHVLSKELQLYFEKVCNAFLDESSEEYRTSGYASLREDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLAD 229
++++V+ GL + +L +M + L+QN + ++PY+ L+P ++TCL+ ++L GN
Sbjct: 228 ISEKVTHGLKDIFVLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGNADLS 287
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL- 288
+ LRD L+ I K+Y H +TL RL ++ L LDP + HYGA+ GL A+
Sbjct: 288 EQFALRDLAGSLLGLISKKYSHSSHTLTPRLARSCLKTFLDPSKPFGAHYGAIIGLHAVG 347
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 334
G VR+L+LPNL Y +LL M ++ +R EA +V GALL
Sbjct: 348 GTEAVRVLILPNLSTYATLLADGM----AEDNPRRPEAEKVLGALL 389
>gi|226287176|gb|EEH42689.1| transcription initiation factor TFIID subunit 6 [Paracoccidioides
brasiliensis Pb18]
Length = 471
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/397 (39%), Positives = 228/397 (57%), Gaps = 31/397 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH++RT LTT DV AL++ ++EP+YG+ S PLRF A +G + LFY++D +V+F+
Sbjct: 48 MRHAKRTVLTTQDVSNALRVLDIEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP-- 112
+I APLPR P + + HWLA+EGVQP IP+N A + + S G N N +
Sbjct: 108 LINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTSADSRNLELVSKGPNANANLAAMSGN 167
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKHILS+ELQLYF+K+ + + A SL D GLH LVPYF F
Sbjct: 168 DNVSVKPLVKHILSKELQLYFEKVCNAFLDELNEEYRLSAFSSLKEDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD- 229
++++V+ L + +L +M + L+QN + ++PY+ L+P V+TCL+ ++LG+ AD
Sbjct: 228 ISEKVTHSLKDLFVLTQIMHMTEALIQNKSLYVDPYVPSLIPPVLTCLIGRQLGSSTADP 287
Query: 230 -NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
H+ LRD +A L+ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL ++
Sbjct: 288 LEHFALRDLSASLINMIARKYSHSSHTLRPRLARTFLKNFLDPGKPLGTHYGAIIGLQSI 347
Query: 289 GP-NVVRLLLLPNLGPYLSLLEPEMLLE-----KQKNEVKRHEAWRVYGALLQAAGQCIY 342
G +VVR L+LPNL Y +L+ M E V+R EA +V G +L G +
Sbjct: 348 GGVDVVRELVLPNLRTYEVVLKDVMGDEGGVGGGVGGGVRRMEAEKVLGVILAVLGTLVE 407
Query: 343 D-----RLKIFPPLSSLPARSVWKTNGIVATLSNKRK 374
+ RL I + W NG+ S +RK
Sbjct: 408 EEEQRRRLGI----EGAEVGAGWLANGV----SEERK 436
>gi|301118558|ref|XP_002907007.1| transcription initiation factor TFIID subunit 6, putative
[Phytophthora infestans T30-4]
gi|262108356|gb|EEY66408.1| transcription initiation factor TFIID subunit 6, putative
[Phytophthora infestans T30-4]
Length = 436
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/337 (41%), Positives = 208/337 (61%), Gaps = 3/337 (0%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIE 61
RHSRR L V++AL+ RN+E +YGF++ G ++++ L++ +++++E +++
Sbjct: 49 RHSRRPQLDPTHVNQALQARNLESLYGFSAPGNVKYKPCEDNETLYFAEEEELELNELLN 108
Query: 62 APLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKH 121
APL + PL + HWLA++GVQP+IPENA V+ + +E V+ K VKH
Sbjct: 109 APLGQIPLQPVLNVHWLAVDGVQPLIPENASVEDDSTCHTSIKDEAFVS-NVDRKPRVKH 167
Query: 122 ILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN 181
+L+ E+QLY+ K+TE AV D L + AL SLA D G+H L+PYF+ F+ +EV ++
Sbjct: 168 VLTEEMQLYYTKVTE-AVKSDDFELQRAALTSLAQDPGIHQLLPYFSRFIYEEVKHSNHD 226
Query: 182 YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKL 241
SLLF+LMR LL N + +E YLHQL+P+++TC++ +L AD+HW LR + AKL
Sbjct: 227 LSLLFSLMRACRCLLVNQSLHVELYLHQLIPAILTCVLGTQLCENPADDHWALRKYAAKL 286
Query: 242 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
VA IC+RYG Y +Q R++KT A+ DP + YGA+ G+ LGP V+ LL P+L
Sbjct: 287 VAQICERYGEKYANIQARVSKTYHKAITDPTCPFSTQYGALHGMLFLGPLVMESLLFPHL 346
Query: 302 GPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAG 338
Y LEP L N V+R EA G L+ A+G
Sbjct: 347 EKYYRRLEP-ALSSSNPNLVQRLEAQNCLGILVHASG 382
>gi|443732927|gb|ELU17490.1| hypothetical protein CAPTEDRAFT_183030 [Capitella teleta]
Length = 602
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/330 (41%), Positives = 199/330 (60%), Gaps = 28/330 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H +R L D+D AL+L+N+EP+YGF + FR A G R++F+ ++K++E D+
Sbjct: 59 MMHGKRRKLIPTDIDNALRLKNIEPLYGFHASEYTPFRHASGGGREVFFQEEKELELADI 118
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA----------------PSNGT 103
I APLP+ PLD +I HWL+IEG QP +PEN P ++ A P
Sbjct: 119 INAPLPKIPLDITIKAHWLSIEGQQPAVPENPPAVSLDAQKLEALDPNVKASILKPKAKA 178
Query: 104 N-NEQKDGLPVEIKLPVK------HILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
N N K V+I+ VK H +S E QLY+ +ITE V SD +AL SLAT
Sbjct: 179 NLNPVKTKHKVKIQEKVKIKEVTTHEMSVEQQLYYKEITESCVG-SDENRRSEALQSLAT 237
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+ F+A+ V + NN +LL LMR+V +LL NP + +E YLH+L+P++
Sbjct: 238 DPGLHQMLPRFSTFIAEGVKVNVVQNNLALLIYLMRMVKSLLDNPTLYLEKYLHELVPAI 297
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
TC+++K+L R DNHW LRDF ++ +A +CK++ N++Q+R+TK +L D K
Sbjct: 298 ATCIISKQLCLRPEVDNHWALRDFASRQMAQVCKQFSSSTNSMQSRVTKIFTTSLQDEKA 357
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGP 303
AL HYGA+ GL LG V++ +LP + P
Sbjct: 358 ALASHYGALTGLGELGTEVIKAFILPYVKP 387
>gi|296817097|ref|XP_002848885.1| transcription initiation factor TFIID subunit 6 [Arthroderma otae
CBS 113480]
gi|238839338|gb|EEQ29000.1| transcription initiation factor TFIID subunit 6 [Arthroderma otae
CBS 113480]
Length = 446
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/376 (38%), Positives = 219/376 (58%), Gaps = 30/376 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RT LTT DV AL++ +VEP+YG+ S PLRF A IG + LFY++D +V+F+
Sbjct: 48 MRHGKRTLLTTQDVSNALRVLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNE-----QKDG 110
+I APLP+ P + S HWLA+EGVQP IP+N A + + S G N
Sbjct: 108 LINAPLPKVPREISFTAHWLAVEGVQPSIPQNPTAADTRHLELVSKGPNANANLAAMSGN 167
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V IK VKHILS ELQLYF+++ + S+ A SL D GLH LVPYF F
Sbjct: 168 ENVNIKPLVKHILSNELQLYFERVCNAFLDDSNEEFRNSAFSSLKEDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLAD 229
++++V+ + + +L +M ++ L++NP + ++PY+ L+P V+TCL+ ++LG + A
Sbjct: 228 ISEKVTHNMKDIFVLTQVMHMIEALIRNPTLYVDPYVAPLIPPVLTCLIGRQLGSSNDAV 287
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL- 288
H+ LRD ++ LV I K+Y +TL+ RL +T L LDP + HYGA+ GL ++
Sbjct: 288 EHFALRDLSSSLVGMIAKKYSPSSHTLKPRLARTFLKTFLDPGQTFGAHYGAIIGLQSIG 347
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIF 348
GPNV+R L++PNL Y +L+ + E +++ EA +V G ++
Sbjct: 348 GPNVIRELIIPNLPVYEVVLKDAVTDEG----LRKAEAEKVAGVIIAV------------ 391
Query: 349 PPLSSLPARSVWKTNG 364
LS++ S+ TNG
Sbjct: 392 --LSTIQDESLVHTNG 405
>gi|344307803|ref|XP_003422568.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Loxodonta africana]
Length = 725
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 203/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 105 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 164
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 165 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 224
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AAP++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 225 LKGKGQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 284
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 285 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 343
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 344 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 403
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 404 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 443
>gi|301790893|ref|XP_002930450.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
isoform 1 [Ailuropoda melanoleuca]
gi|281347883|gb|EFB23467.1| hypothetical protein PANDA_020897 [Ailuropoda melanoleuca]
Length = 678
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 203/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AAP++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|73957898|ref|XP_546964.2| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Canis lupus familiaris]
Length = 678
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 203/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AAP++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKAQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|301790895|ref|XP_002930451.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
isoform 2 [Ailuropoda melanoleuca]
Length = 668
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 203/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 48 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 107
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 108 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 167
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AAP++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 168 LKGKGQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 227
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 228 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 286
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 287 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 346
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 347 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 386
>gi|317031631|ref|XP_001393919.2| transcription initiation factor TFIID complex subunit [Aspergillus
niger CBS 513.88]
gi|350640200|gb|EHA28553.1| hypothetical protein ASPNIDRAFT_56887 [Aspergillus niger ATCC 1015]
Length = 447
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/346 (41%), Positives = 206/346 (59%), Gaps = 16/346 (4%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRHSRRT LTT DV +AL++ +VEP+YG+ S PLRF A +G + LFY++D++V+F+
Sbjct: 48 MRHSRRTLLTTQDVAQALRVLDVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNEQ-----KDG 110
+I APLPR P + S HWLA+EGVQP IP+N A + + S G N G
Sbjct: 108 LINAPLPRVPREISFTAHWLAVEGVQPSIPQNPTAADSRNMELMSKGPNASSTLAAMSGG 167
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKH+LS+ELQLYF+K+ + S SL D GLH LVPYF F
Sbjct: 168 GNVSVKPLVKHVLSKELQLYFEKVCNAFLDESSEEYRTSGYASLREDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA-D 229
++++V+ GL + +L +M + L+QN + ++PY+ L+P ++TCL+ ++LG
Sbjct: 228 ISEKVTHGLKDVFVLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGSAELT 287
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL- 288
+ LRD A L+ I K+Y + +TL+ RL ++ L LDP + HYGAV GL A+
Sbjct: 288 EQFALRDLAASLLGLIAKKYSNSSHTLKPRLARSCLKTFLDPSKPFGAHYGAVIGLHAVG 347
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 334
G VR+L++PNL Y +LL+ M E +R EA RV LL
Sbjct: 348 GAEAVRVLIMPNLPTYGNLLKDGMAEESP----RRPEAERVLSVLL 389
>gi|134078474|emb|CAL00337.1| unnamed protein product [Aspergillus niger]
Length = 449
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/346 (41%), Positives = 206/346 (59%), Gaps = 16/346 (4%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRHSRRT LTT DV +AL++ +VEP+YG+ S PLRF A +G + LFY++D++V+F+
Sbjct: 48 MRHSRRTLLTTQDVAQALRVLDVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNEQ-----KDG 110
+I APLPR P + S HWLA+EGVQP IP+N A + + S G N G
Sbjct: 108 LINAPLPRVPREISFTAHWLAVEGVQPSIPQNPTAADSRNMELMSKGPNASSTLAAMSGG 167
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKH+LS+ELQLYF+K+ + S SL D GLH LVPYF F
Sbjct: 168 GNVSVKPLVKHVLSKELQLYFEKVCNAFLDESSEEYRTSGYASLREDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA-D 229
++++V+ GL + +L +M + L+QN + ++PY+ L+P ++TCL+ ++LG
Sbjct: 228 ISEKVTHGLKDVFVLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGSAELT 287
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL- 288
+ LRD A L+ I K+Y + +TL+ RL ++ L LDP + HYGAV GL A+
Sbjct: 288 EQFALRDLAASLLGLIAKKYSNSSHTLKPRLARSCLKTFLDPSKPFGAHYGAVIGLHAVG 347
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 334
G VR+L++PNL Y +LL+ M E +R EA RV LL
Sbjct: 348 GAEAVRVLIMPNLPTYGNLLKDGMAEESP----RRPEAERVLSVLL 389
>gi|358371612|dbj|GAA88219.1| transcription initiation factor TFIID complex 60 kDa subunit
[Aspergillus kawachii IFO 4308]
Length = 447
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/346 (41%), Positives = 206/346 (59%), Gaps = 16/346 (4%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRHSRRT LTT DV +AL++ +VEP+YG+ S PLRF A +G + LFY++D++V+F+
Sbjct: 48 MRHSRRTLLTTQDVAQALRVLDVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNEQ-----KDG 110
+I APLPR P + S HWLA+EGVQP IP+N A + + S G N G
Sbjct: 108 LINAPLPRVPREISFTAHWLAVEGVQPSIPQNPTAADSRNMELMSKGPNASSTLAAMSGG 167
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKH+LS+ELQLYF+K+ + S SL D GLH LVPYF F
Sbjct: 168 GNVSVKPLVKHVLSKELQLYFEKVCNAFLDESSEEYRTSGYASLREDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA-D 229
++++V+ GL + +L +M + L+QN + ++PY+ L+P ++TCL+ ++LG
Sbjct: 228 ISEKVTHGLKDVFVLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGSAELT 287
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL- 288
+ LRD A L+ I K+Y + +TL+ RL ++ L LDP + HYGAV GL A+
Sbjct: 288 EQFALRDLAASLLGLIAKKYSNSSHTLKPRLARSCLKTFLDPSKPFGAHYGAVIGLHAVG 347
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 334
G VR+L++PNL Y +LL+ M E +R EA RV LL
Sbjct: 348 GAEAVRVLIMPNLPTYGNLLKDGMAEESP----RRPEAERVLSVLL 389
>gi|62752037|ref|NP_001015525.1| transcription initiation factor TFIID subunit 6 [Bos taurus]
gi|61553904|gb|AAX46477.1| TBP-associated factor 6 isoform alpha [Bos taurus]
gi|296472919|tpg|DAA15034.1| TPA: TBP-associated factor 6 [Bos taurus]
Length = 678
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 203/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AAP++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|241651046|ref|XP_002411265.1| transcription initiation factor tfii-D, putative [Ixodes
scapularis]
gi|215503895|gb|EEC13389.1| transcription initiation factor tfii-D, putative [Ixodes
scapularis]
Length = 630
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 155/371 (41%), Positives = 216/371 (58%), Gaps = 37/371 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H++R L+T D D ALK++NVEP+YGF + FR A G R+LF++++K++E DV
Sbjct: 56 MGHAKRRRLSTADFDNALKMKNVEPLYGFHCPDYVPFRYASGGGRELFFVEEKELELNDV 115
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTN------N 105
I + LP+ PLD SI HWL+IEG+QP +PEN P V++I P N +
Sbjct: 116 ISSQLPKLPLDVSIKAHWLSIEGIQPTVPENPPPVSKDLQRVESID-PVTKLNKAVLPGS 174
Query: 106 EQKDGLP-----------VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSL 154
+ GLP V++K H LS E QLY+ +ITE V DS +AL SL
Sbjct: 175 TKVPGLPTKQERTKHVETVKVKQLATHELSVEQQLYYKEITEACVGSDDS-RRAEALQSL 233
Query: 155 ATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMP 212
A+D GLH ++P F+++ V + NN + L L+R+V LL N + +E YLH+L+P
Sbjct: 234 ASDPGLHQMLPRLCTFISEGVKVNVVQNNLAFLIYLIRMVKALLDNQTLYLEKYLHELIP 293
Query: 213 SVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP 271
SV TC+V+++L R DNHW LRDF ++L+A ICK + N +QTR+T+ AL +
Sbjct: 294 SVATCIVSRQLCTRPDVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSRALQND 353
Query: 272 KRALTQHYGAVQGLAALGPNVVRLLLLP---NLGPYL--SLLEPEML-LEKQKNEVKRHE 325
K L HYGAV GLA LGP VVR +LP LG L L EP ++K+ E +
Sbjct: 354 KMPLASHYGAVSGLAELGPEVVRSFVLPRIRQLGEKLRQGLEEPSTSPVDKKAAEHIKQL 413
Query: 326 AWRVYGALLQA 336
A RV +L+A
Sbjct: 414 ALRVVAPVLKA 424
>gi|295666910|ref|XP_002794005.1| transcription initiation factor TFIID subunit 6 [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226277658|gb|EEH33224.1| transcription initiation factor TFIID subunit 6 [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 467
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 213/355 (60%), Gaps = 14/355 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH++RT LTT DV AL++ ++EP+YG+ S PLRF A +G + LFY++D +V+F+
Sbjct: 48 MRHAKRTVLTTQDVSNALRVLDIEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP-- 112
+I APLPR P + + HWLA+EGVQP IP+N A + + S G N N +
Sbjct: 108 LINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTSADSRNLELVSKGPNANANLAAMSGN 167
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKHILS+ELQLYF+K+ + + A SL D GLH LVPYF F
Sbjct: 168 DNVSVKPLVKHILSKELQLYFEKVCNAFLDELNEEYRLSAFSSLKEDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD- 229
++++V+ L + +L +M + L+QN + ++PY+ L+P V+TCL+ ++LG+ AD
Sbjct: 228 ISEKVTHSLKDLFVLTQIMHMTEALIQNKSLYVDPYVPSLIPPVLTCLIGRQLGSSTADP 287
Query: 230 -NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
H+ LRD +A L+ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL ++
Sbjct: 288 LEHFALRDLSASLINMIARKYSHSSHTLRPRLARTFLKNFLDPGKPLGTHYGAIIGLQSI 347
Query: 289 GP-NVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRH-EAWRVYGALLQAAGQCI 341
G +VVR L+LPNL Y +L+ M E R EA +V G +L G +
Sbjct: 348 GGVDVVRELVLPNLRTYEVVLKDAMGDEGGVGGGVRRMEAEKVLGVILAVLGTLV 402
>gi|154757685|gb|AAI51670.1| TAF6 protein [Bos taurus]
Length = 439
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 203/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AAP++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|190345333|gb|EDK37202.2| hypothetical protein PGUG_01300 [Meyerozyma guilliermondii ATCC
6260]
Length = 489
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/347 (39%), Positives = 198/347 (57%), Gaps = 46/347 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R TLTT+D+ ALK+ N+EP+YG+ + PL F+ + + L+Y+DD ++EF+
Sbjct: 58 MRHSKRKTLTTEDISHALKVFNIEPLYGYDNSQPLNFKETMVGASGQTLYYIDDNEIEFE 117
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI--------------------- 96
+I LP+ P + HWLAIEGVQP+IP+N I
Sbjct: 118 KLINQELPKVPRQATFTAHWLAIEGVQPMIPQNPLPSEIKNLPPVLRGATTSILGNDILS 177
Query: 97 ---------AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSR--SDSV 145
A +NG+ QK EIK VKH+LS+EL+LYFDK++E+ VS
Sbjct: 178 YANGDGAKDAEAANGSTKAQKTEKNTEIKPLVKHVLSKELKLYFDKVSEVLVSSDPEKQE 237
Query: 146 LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEP 205
L AL SL +D GLH LVPYF FVA++++ L N +LF ++ V+ L +N I +EP
Sbjct: 238 LKDAALTSLKSDPGLHQLVPYFIQFVAEQITNQLRNIDILFTMLEVISALAENSTIFLEP 297
Query: 206 YLHQLMPSVVTCLVAKRLGNRLAD-----------NHWELRDFTAKLVAAICKRYGHVYN 254
Y+H LMP ++T L+AK++ + + N +R+F A L+ I K YG Y+
Sbjct: 298 YVHALMPCILTLLLAKKISSAPKEQTEEEEKAALKNQLAVREFAAILLEHIVKVYGSSYS 357
Query: 255 TLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
TL+ R+T+TLL ALLDP + YGA+ GL +G V++ +L+ NL
Sbjct: 358 TLRPRVTRTLLRALLDPSKPTGTQYGALLGLKNMGSEVIKFVLVGNL 404
>gi|146419333|ref|XP_001485629.1| hypothetical protein PGUG_01300 [Meyerozyma guilliermondii ATCC
6260]
Length = 489
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 203/355 (57%), Gaps = 48/355 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRR----AIGYRDLFYLDDKDVEF 56
MRHS+R TLTT+D+ ALK+ N+EP+YG+ + PL F+ A+G + L+Y+DD ++EF
Sbjct: 58 MRHSKRKTLTTEDISHALKVFNIEPLYGYDNSQPLNFKETMVGALG-QTLYYIDDNEIEF 116
Query: 57 KDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI-------------------- 96
+ +I LP+ P + HWLAIEGVQP+IP+N I
Sbjct: 117 EKLINQELPKVPRQATFTAHWLAIEGVQPMIPQNPLPSEIKNLPPVLRGATTSILGNDIL 176
Query: 97 ----------AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSR--SDS 144
A +NG+ QK EIK VKH+LS+EL+LYFDK+ E+ VS
Sbjct: 177 LYANGDGAKDAEAANGSTKAQKTEKNTEIKPLVKHVLSKELKLYFDKVLEVLVSSDPEKQ 236
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIE 204
L AL SL +D GLH LVPYF FVA++++ L N +LF ++ V+ L +N I +E
Sbjct: 237 ELKDAALTSLKSDPGLHQLVPYFIQFVAEQITNQLRNIDILFTMLEVISALAENSTIFLE 296
Query: 205 PYLHQLMPSVVTCLVAKRLGNRLAD-----------NHWELRDFTAKLVAAICKRYGHVY 253
PY+H LMP ++T L+AK++ + + N +R+F A L+ I K YG Y
Sbjct: 297 PYVHALMPCILTLLLAKKISSAPKEQTEEEEKAALKNQLAVREFAAILLEHIVKVYGSSY 356
Query: 254 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLL 308
+TL+ R+T+TLL ALLDP + YGA+ GL +G V++ +L+ NL + +L+
Sbjct: 357 STLRPRVTRTLLRALLDPSKPTGTQYGALLGLKNMGSEVIKFVLVGNLKVWYNLV 411
>gi|225683556|gb|EEH21840.1| TATA-binding protein-associated-factor [Paracoccidioides
brasiliensis Pb03]
Length = 467
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 226/393 (57%), Gaps = 27/393 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH++RT LTT DV AL++ ++EP+YG+ S PLRF A +G + LFY++D +V+F+
Sbjct: 48 MRHAKRTVLTTQDVSNALRVLDIEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP-- 112
+I APLPR P + + HWLA+EGVQP IP+N A + + S G N N +
Sbjct: 108 LINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTSADSRNLELVSKGPNANANLAAMSGN 167
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKHILS+ELQLYF+K+ + + A SL D GLH LVPYF F
Sbjct: 168 DNVSVKPLVKHILSKELQLYFEKVCNAFLDELNEEYRLSAFSSLKEDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD- 229
++++V+ L + +L +M + L+QN + ++PY+ L+P V+TCL+ ++LG+ AD
Sbjct: 228 ISEKVTHSLKDLFVLTQIMHMTEALIQNKSLYVDPYVPSLIPPVLTCLIGRQLGSSTADP 287
Query: 230 -NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
H+ LRD +A L+ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL ++
Sbjct: 288 LEHFALRDLSASLINMIARKYSHSSHTLRPRLARTFLKNFLDPGKPLGTHYGAIIGLQSI 347
Query: 289 GP-NVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRH-EAWRVYGALLQAAGQCIYD--- 343
G +VVR L+LPNL Y +L+ M E R EA +V G +L G + +
Sbjct: 348 GGVDVVRELVLPNLRTYEVVLKDVMGDEGGVGGGVRRMEAEKVLGVILAVLGTLVEEEEQ 407
Query: 344 --RLKIFPPLSSLPARSVWKTNGIVATLSNKRK 374
RL I + W NG+ S +RK
Sbjct: 408 RRRLGI----EGAEVVAGWLANGV----SEERK 432
>gi|50548001|ref|XP_501470.1| YALI0C05346p [Yarrowia lipolytica]
gi|49647337|emb|CAG81771.1| YALI0C05346p [Yarrowia lipolytica CLIB122]
Length = 482
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 146/381 (38%), Positives = 226/381 (59%), Gaps = 39/381 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGF---ASGGPLRFRRAIGY--RDLFYLDDKDVE 55
MRHS+RTTL T DV EAL+ NVEP+YG+ A+ + +R AI + L+Y+DD +V+
Sbjct: 55 MRHSKRTTLGTSDVGEALRALNVEPLYGYEGVANEKSVSYREAITGPGQTLYYVDDDEVD 114
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNG---TNNEQ-- 107
F+ +I PLP+ P TS+ HW+AI+GVQP IP+N + ++A++ G TNN
Sbjct: 115 FERLINQPLPKVPRATSLTAHWVAIDGVQPAIPQNPLASDIRAMSVDLRGAQTTNNSIAT 174
Query: 108 -KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVL----------FKQ---ALVS 153
V++K VKH+LS+ELQLYFD++ + S+ V+ KQ AL S
Sbjct: 175 INGSSDVKVKPLVKHVLSKELQLYFDRVVGALMDGSEVVVTATGDEKEAAVKQHAAALSS 234
Query: 154 LATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPS 213
L D G H LVPYF FVA++V+ L N +L+ +++V+ LL NP + ++PY+H LMPS
Sbjct: 235 LRNDPGFHQLVPYFVQFVAEKVTHNLKNLPVLYTMLQVIDALLTNPTLFMDPYIHSLMPS 294
Query: 214 VVTCLVAKRLG-----------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTK 262
V+T ++AK++G +++ + + +RDF A L+A IC +Y +Y +L+ R +
Sbjct: 295 VLTLILAKKIGPKPGHEDIVEDSQVTISQYSIRDFAASLLARICDKYNEIYASLKPRAIR 354
Query: 263 TLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVK 322
TLL A +DP + + YGA+QG+ ALG VR++++ NL + L +L + ++
Sbjct: 355 TLLKAFMDPTKPIPTLYGALQGIQALGNEAVRVVIVGNLKLWSDTLYNRLLKSSSDSTLE 414
Query: 323 RHEAWR-VYGALLQAAGQCIY 342
+ + + AL Q GQ IY
Sbjct: 415 LEQLNKCLISALRQIKGQAIY 435
>gi|395852787|ref|XP_003798913.1| PREDICTED: transcription initiation factor TFIID subunit 6
[Otolemur garnettii]
Length = 677
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 202/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A P++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGATPTDGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|453083775|gb|EMF11820.1| transcription initiation factor TFIID complex 60 kDa subunit
[Mycosphaerella populorum SO2202]
Length = 452
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 210/352 (59%), Gaps = 24/352 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH++RTTLTT D+ +AL++ +VEP+YG+ S PLRF A IG + LFY++D++V+F+
Sbjct: 49 MRHAKRTTLTTQDISQALRVLDVEPLYGYESTRPLRFGEASIGPGQPLFYVEDEEVDFEK 108
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQA------IAAPSNGTNN----EQK 108
+I APLP+ P + S HWLA+EGVQP IP+N P QA +A G N
Sbjct: 109 LINAPLPKVPREISFTGHWLAVEGVQPSIPQN-PTQADQRGQELAGKGQGANTLAALSGN 167
Query: 109 DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFT 168
D V +K VKH+LS+ELQLYF++I + + A SL +D GLH LVPYF
Sbjct: 168 DN--VAVKPLVKHVLSKELQLYFERICAAILDEDNMEYQTAAFASLRSDPGLHQLVPYFI 225
Query: 169 YFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA 228
F+AD+V+ GL + +L MR+V +LL N + I PY+ L+P+++TC+V K LG
Sbjct: 226 QFIADKVTHGLKSLFILAQSMRMVESLLANASLYIAPYVSALIPAILTCVVGKHLGAASK 285
Query: 229 D---NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGL 285
D H+ LR F++ L+ I ++YG +TL+ R+ + L LD + HYGAV GL
Sbjct: 286 DQGEGHYALRAFSSSLLLRIAQKYGDSSSTLKPRIARACLKHFLDSHKPYGTHYGAVLGL 345
Query: 286 AAL-GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
+ G VR L+LPNL Y L+ E K++ KR A +V A++ A
Sbjct: 346 TVIAGSAGVRSLILPNLQAYDLHLQ-----EGLKDDAKRPHALKVVEAVVSA 392
>gi|149757698|ref|XP_001505099.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Equus caballus]
Length = 678
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 202/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSTKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A P++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGATPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|328873717|gb|EGG22084.1| TATA-binding protein-associated-factor [Dictyostelium fasciculatum]
Length = 462
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/378 (34%), Positives = 210/378 (55%), Gaps = 61/378 (16%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIG-YRDLFYLDDKDVEFKDV 59
M+HS+R L+TDD+++ALKLRN+E +YG+++ P +F + + ++Y+ D+++ F+D+
Sbjct: 48 MKHSKREYLSTDDINDALKLRNIEVLYGYSNCEPHKFSKVQSPTQAIYYIHDRELNFQDI 107
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN----------------------------- 90
I PLP+ P + SI HWLAIEGVQP+IP+N
Sbjct: 108 ISQPLPKCPREPSIAAHWLAIEGVQPLIPQNPSAAVIAAAHKASSSSSSSSSSTNNSNDQ 167
Query: 91 ---------APVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSR 141
P+N + G +K VKH+L++E+Q++++K+
Sbjct: 168 STKKMKLDDQSQPQSQQPTNTAESTTFTGDTAIVKPQVKHVLAKEMQMFYEKVVSSVNDL 227
Query: 142 SDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHI 201
+ LF+ + SL TDS L+ L+PYFT F++ +V++ L N LL LMR+ +L++ H+
Sbjct: 228 PNHTLFEGVVESLRTDSSLNQLLPYFTNFISLQVTQNLTNLELLMRLMRMCRAILESTHL 287
Query: 202 QIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
E YLHQ+MPS++TCL+ ++L +NHW+LRD+ A ++ +CK+YG Y +LQ R+T
Sbjct: 288 HAELYLHQMMPSMMTCLLGRKLCQSANENHWKLRDYVADILVLVCKKYGDSYGSLQGRIT 347
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEV 321
+TLL AL D ++L HYGA+ L+A LEPE L N+
Sbjct: 348 RTLLQALHDTSKSLPTHYGAIVALSA--------------------LEPE--LNNPSNQT 385
Query: 322 KRHEAWRVYGALLQAAGQ 339
K E RV AL+++ G+
Sbjct: 386 KSLEVDRVVNALIKSIGK 403
>gi|325179833|emb|CCA14236.1| transcription initiation factor TFIID subunit 6 puta [Albugo
laibachii Nc14]
Length = 449
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 201/340 (59%), Gaps = 5/340 (1%)
Query: 3 HSRRTTLTTDDVDEALKLRNVEPVYGFASG----GPLRFRRAIGYRDLFYLDDKDVEFKD 58
H++R L+T D+++AL+ R++EP+YGF S G + + + L++ +D++ ++
Sbjct: 50 HAKRRKLSTRDINQALQARHLEPLYGFQSCSLDHGIIPLQACKEHATLYFYNDQEWNLQE 109
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLP 118
++EA P P++ + HWLAI GVQP IPEN + + ++ K
Sbjct: 110 LLEAVFPPIPIEPCVRMHWLAIGGVQPQIPENECTHNSKESDFASMQHEDSTQQIDRKPL 169
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
VKH+L+ E+Q+Y+ K+TE ++D L + A S++ D G+ L+PY + FV +EV
Sbjct: 170 VKHVLTEEMQVYYSKLTEAIKQQTDLELQRAAFHSISQDPGMRQLLPYVSRFVYEEVKNS 229
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 238
+ S+L +LMRV LL NPH++IE YLHQL+P++++C++ +L A+NHW LRD
Sbjct: 230 NRDLSILVSLMRVCRCLLVNPHLRIELYLHQLLPALLSCVLGHQLCENAAENHWALRDHA 289
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
A+L+A ICK+YG Y LQ R++KT A+ DP + YGA+ GL LGP V+ LL
Sbjct: 290 AQLIATICKKYGETYEKLQARVSKTYHLAISDPHCPFSTQYGAINGLMYLGPLVMEKLLF 349
Query: 299 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAG 338
PNL Y LEP L + ++R EA G L+ A+G
Sbjct: 350 PNLPMYYKRLEP-ALSSSNPDLIQRLEAQNCLGTLVHASG 388
>gi|148233408|ref|NP_001081232.1| transcription initiation factor TFIID subunit 6 [Xenopus laevis]
gi|229463009|sp|Q91857.3|TAF6_XENLA RecName: Full=Transcription initiation factor TFIID subunit 6;
Short=xTAF6; AltName: Full=Transcription initiation
factor TFIID 60 kDa subunit; Short=TAF(II)60;
Short=TAFII-60; Short=TAFII60; AltName:
Full=Transcription initiation factor TFIID 70 kDa
subunit; Short=TAF(II)70; Short=TAFII-70; Short=TAFII70
gi|46250328|gb|AAH68776.1| LOC397724 protein [Xenopus laevis]
Length = 618
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 200/335 (59%), Gaps = 35/335 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LT D+D ALKL+NVEP+YGF L FR A G R+L + ++K+ + D+
Sbjct: 56 MHVGKRQKLTPSDIDAALKLKNVEPIYGFHPKEFLPFRYASGGGRELHFYEEKETDLSDI 115
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQA-----IAAPSN----- 101
I PLPR PLD S+ HWL+IEGVQP IPEN P +A +A P
Sbjct: 116 ISTPLPRVPLDVSLKAHWLSIEGVQPAIPENPPPVPKEQQKTEATEPLKVAKPGQEEGLP 175
Query: 102 --------GTNNEQK----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ 149
G E+K +G P+++K H LS E QLY+ +ITE V ++ +
Sbjct: 176 GKGQGSGEGKGKEKKTAILEGAPLKLKPRSIHELSVEQQLYYKEITEACVGSCEAK-RAE 234
Query: 150 ALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYL 207
AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E YL
Sbjct: 235 ALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYL 294
Query: 208 HQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLN 266
H+L+P+V+TC+V+++L R DNHW LRDF A+L+A ICK + N +Q+R+TKT
Sbjct: 295 HELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKTFTK 354
Query: 267 ALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
+D + T YG++ GLA LGP+VV+ L++P L
Sbjct: 355 TWVDDRTPWTTRYGSIAGLAELGPDVVKTLIVPRL 389
>gi|417412310|gb|JAA52545.1| Putative transcription initiation factor tfiid subunit taf6 also
component of histone acetyltransfer, partial [Desmodus
rotundus]
Length = 686
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 202/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 66 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 125
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 126 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 185
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A P++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 186 LKGKGQGATPADGKGKEKKAPPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 245
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 246 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 304
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 305 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 364
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 365 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 404
>gi|410984414|ref|XP_003998523.1| PREDICTED: transcription initiation factor TFIID subunit 6 [Felis
catus]
Length = 678
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 202/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AAP++ E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGAAPADSKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|444724247|gb|ELW64857.1| Transcription initiation factor TFIID subunit 6 [Tupaia chinensis]
Length = 678
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 202/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AAP++ E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGAAPADSKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|334323236|ref|XP_001372137.2| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Monodelphis domestica]
Length = 767
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 202/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 146 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 205
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 206 INTPLPRVPLDVCLKAHWLSIEGFQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 265
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AA ++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 266 LKGKGQGAATADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 325
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 326 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 384
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 385 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 444
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 445 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 484
>gi|112984254|ref|NP_001037690.1| transcription initiation factor TFIID subunit 6 [Rattus norvegicus]
gi|71679743|gb|AAI00109.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Rattus norvegicus]
Length = 647
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AA ++G E+K +G P +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|148687262|gb|EDL19209.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_b [Mus musculus]
Length = 681
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 61 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 120
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 121 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 180
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AA ++G E+K +G P +K H LS E QLY+ +ITE V ++
Sbjct: 181 LKGKGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEA 240
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 241 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 299
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 300 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 359
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 360 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 399
>gi|6678215|ref|NP_033341.1| transcription initiation factor TFIID subunit 6 [Mus musculus]
gi|3024691|sp|Q62311.1|TAF6_MOUSE RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=Transcription initiation factor TFIID 70
kDa subunit; Short=TAF(II)70; Short=TAFII-70;
Short=TAFII70; AltName: Full=Transcription initiation
factor TFIID 80 kDa subunit; Short=TAF(II)80;
Short=TAFII-80; Short=TAFII80; AltName: Full=p80
gi|1372971|dbj|BAA08417.1| TFIID subunit p80 [Mus musculus]
gi|35193204|gb|AAH58583.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Mus musculus]
gi|148687260|gb|EDL19207.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Mus musculus]
gi|148687261|gb|EDL19208.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Mus musculus]
Length = 678
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AA ++G E+K +G P +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|378727733|gb|EHY54192.1| transcription initiation factor TFIID subunit D5 [Exophiala
dermatitidis NIH/UT8656]
Length = 451
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/361 (38%), Positives = 211/361 (58%), Gaps = 18/361 (4%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
M+HS+RT L T D+ AL+L +VEP+YG+ + PL++ A +G + LFY++D++++F+
Sbjct: 48 MKHSKRTILWTQDIAHALRLLDVEPLYGYETTRPLKYGEASLGPGQPLFYVEDEEMDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIA-----APSNGTNNEQKDGL-- 111
+I APLP+ P + S HWLA+EGVQP IP+N P A P N +
Sbjct: 108 LINAPLPKVPREVSFTAHWLAVEGVQPSIPQN-PTSNEARNLELVPKGPNANPALAAMTG 166
Query: 112 --PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTY 169
K VKHILS+ELQLYF+K+ + + L SL D GLH LVPYF
Sbjct: 167 ADSTTTKPQVKHILSKELQLYFEKVCSSVLDETQPEYRTAGLASLRDDPGLHQLVPYFVQ 226
Query: 170 FVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD 229
FVA++V+ L + +L +M ++ L +N + + PY+ L+P V+TCL + LG+ +
Sbjct: 227 FVAEKVTHNLKDLFVLTQMMLLIDALTRNDKLNLTPYVASLVPPVLTCLTGRSLGSGIGS 286
Query: 230 -NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
+H++LRD A L+ +C++Y + L+ RL ++LL LDPK+ HYGA+ GL A+
Sbjct: 287 LDHYDLRDLAASLLGHLCRKYSKYSHNLKPRLARSLLKTFLDPKKPAGSHYGAILGLKAI 346
Query: 289 -GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKI 347
GP VVR L++PNL + LLE ++ Q VK+ EA +V A+ A G + D + +
Sbjct: 347 GGPEVVRQLIVPNLKAFTELLEDDL----QDQGVKKAEAEKVVSAIFNALGTLVDDEIPL 402
Query: 348 F 348
Sbjct: 403 L 403
>gi|3024673|sp|Q63801.1|TAF6_RAT RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=Transcription initiation factor TFIID 70
kDa subunit; Short=TAF(II)70; Short=TAFII70; AltName:
Full=Transcription initiation factor TFIID 80 kDa
subunit; Short=TAF(II)80; Short=TAFII-80; Short=TAFII80;
AltName: Full=p80
gi|1109650|dbj|BAA08435.1| TFIID subunit p80 [Rattus sp.]
gi|149028526|gb|EDL83898.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Rattus norvegicus]
gi|149028527|gb|EDL83899.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Rattus norvegicus]
gi|149028528|gb|EDL83900.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, isoform CRA_a [Rattus norvegicus]
Length = 678
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AA ++G E+K +G P +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|395533667|ref|XP_003768876.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Sarcophilus harrisii]
Length = 668
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 202/341 (59%), Gaps = 42/341 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 48 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 107
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------------------------- 92
I PLPR PLD + HWL+IEG QP IPEN P
Sbjct: 108 INTPLPRVPLDVCLKAHWLSIEGFQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 167
Query: 93 ----VQAIAAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSD 143
Q +A+ ++G E+K +G P+ +K H LS E QLY+ +ITE V +
Sbjct: 168 LKGKGQGVAS-TDGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCE 226
Query: 144 SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHI 201
+ +AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 227 AKR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTL 285
Query: 202 QIEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRL 260
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+
Sbjct: 286 YLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRI 345
Query: 261 TKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
TKT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 346 TKTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 386
>gi|395533665|ref|XP_003768875.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Sarcophilus harrisii]
Length = 678
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 202/341 (59%), Gaps = 42/341 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------------------------- 92
I PLPR PLD + HWL+IEG QP IPEN P
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGFQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 93 ----VQAIAAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSD 143
Q +A+ ++G E+K +G P+ +K H LS E QLY+ +ITE V +
Sbjct: 178 LKGKGQGVAS-TDGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCE 236
Query: 144 SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHI 201
+ +AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 237 AKR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTL 295
Query: 202 QIEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRL 260
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+
Sbjct: 296 YLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRI 355
Query: 261 TKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
TKT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 356 TKTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|402862990|ref|XP_003895820.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Papio anubis]
gi|402862992|ref|XP_003895821.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Papio anubis]
gi|402862998|ref|XP_003895824.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
5 [Papio anubis]
gi|355560492|gb|EHH17178.1| hypothetical protein EGK_13513 [Macaca mulatta]
gi|355747541|gb|EHH52038.1| hypothetical protein EGM_12403 [Macaca fascicularis]
Length = 678
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A ++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGATAADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|332866939|ref|XP_003318659.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Pan troglodytes]
gi|397489548|ref|XP_003815787.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
3 [Pan paniscus]
Length = 714
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 95 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 154
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 155 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 214
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A ++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 215 LKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 274
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 275 K-RAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 333
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 334 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 393
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 394 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 433
>gi|51094600|gb|EAL23852.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [Homo sapiens]
Length = 667
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A ++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|332866935|ref|XP_003339456.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
5 [Pan troglodytes]
gi|332866937|ref|XP_001139475.2| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Pan troglodytes]
gi|332866941|ref|XP_003318660.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
3 [Pan troglodytes]
gi|397489544|ref|XP_003815785.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Pan paniscus]
gi|397489546|ref|XP_003815786.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Pan paniscus]
gi|397489550|ref|XP_003815788.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
4 [Pan paniscus]
Length = 677
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A ++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|298676520|ref|NP_001177344.1| transcription initiation factor TFIID subunit 6 isoform epsilon
[Homo sapiens]
gi|194390122|dbj|BAG61823.1| unnamed protein product [Homo sapiens]
Length = 714
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 95 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 154
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 155 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 214
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A ++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 215 LKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 274
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 275 K-RAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 333
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 334 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 393
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 394 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 433
>gi|348568860|ref|XP_003470216.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cavia porcellus]
Length = 707
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 87 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 146
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 147 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 206
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A P++G E+K +G + +K H LS E QLY+ +ITE V ++
Sbjct: 207 LKGKGQGATPADGKGKEKKAPPLLEGASLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 266
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 267 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 325
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 326 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 385
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 386 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 425
>gi|193695219|ref|XP_001947762.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Acyrthosiphon pisum]
Length = 526
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/328 (41%), Positives = 193/328 (58%), Gaps = 28/328 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M HS R L D+D ALK+ +EP+YGF + + FR A G R+L ++DDKD++ +
Sbjct: 56 MMHSNRCKLLPSDIDNALKVFGIEPIYGFHAKDHIPFRYASGGGRELHFIDDKDIDLIEF 115
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----VQAIAA---------------- 98
+ APL + PL+ SI CHWLAI+GVQP +PEN P VQ +
Sbjct: 116 VNAPLAKLPLEISIRCHWLAIDGVQPTVPENPPSVSKDVQKLECVDPLNKLKKPIDKEVS 175
Query: 99 --PSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
PS G + ++ V +K H LS E QLY+ +ITE V SD +AL SLA+
Sbjct: 176 GRPSTGKAQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDESRRAEALQSLAS 234
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+++PSV
Sbjct: 235 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVKALLDNPALYLEKYLHEIIPSV 294
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
VTC+V+K+L R DNHW LRDF ++L+A ICK + N +QTR+T+ NA K
Sbjct: 295 VTCVVSKQLCMRPEIDNHWALRDFASRLMAQICKMFNTPTNNVQTRITRVFTNATNSDKT 354
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNL 301
AL YGA++GLA LG +++ ++P +
Sbjct: 355 ALPSVYGALEGLAELGTETIKVFVIPRV 382
>gi|51094601|gb|EAL23853.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [Homo sapiens]
Length = 667
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 48 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 107
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 108 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 167
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A ++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 168 LKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 227
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 228 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 286
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 287 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 346
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 347 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 386
>gi|402862994|ref|XP_003895822.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
3 [Papio anubis]
Length = 775
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 155 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 214
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 215 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 274
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A ++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 275 LKGKGQGATAADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 334
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 335 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 393
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 394 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 453
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 454 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 493
>gi|5032147|ref|NP_005632.1| transcription initiation factor TFIID subunit 6 isoform alpha [Homo
sapiens]
gi|21536359|ref|NP_647476.1| transcription initiation factor TFIID subunit 6 isoform alpha [Homo
sapiens]
gi|1729810|sp|P49848.1|TAF6_HUMAN RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=RNA polymerase II TBP-associated factor
subunit E; AltName: Full=Transcription initiation factor
TFIID 70 kDa subunit; Short=TAF(II)70; Short=TAFII-70;
Short=TAFII70; AltName: Full=Transcription initiation
factor TFIID 80 kDa subunit; Short=TAF(II)80;
Short=TAFII-80; Short=TAFII80
gi|437385|gb|AAA63643.1| TAFII70 [Homo sapiens]
gi|1136306|gb|AAA84390.1| TAFII80 [Homo sapiens]
gi|17390254|gb|AAH18115.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [Homo sapiens]
gi|23266704|gb|AAN10295.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [Homo sapiens]
gi|51094599|gb|EAL23851.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [Homo sapiens]
gi|119596995|gb|EAW76589.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa, isoform CRA_b [Homo sapiens]
gi|119596997|gb|EAW76591.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa, isoform CRA_b [Homo sapiens]
gi|119596998|gb|EAW76592.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa, isoform CRA_b [Homo sapiens]
gi|123981418|gb|ABM82538.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [synthetic construct]
gi|123996257|gb|ABM85730.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa [synthetic construct]
gi|261860128|dbj|BAI46586.1| Transcription initiation factor TFIID subunit 6 [synthetic
construct]
Length = 677
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A ++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|402862996|ref|XP_003895823.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
4 [Papio anubis]
Length = 734
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 114 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 173
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 174 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 233
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A ++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 234 LKGKGQGATAADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 293
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 294 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 352
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 353 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 412
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 413 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 452
>gi|258571087|ref|XP_002544347.1| hypothetical protein UREG_03864 [Uncinocarpus reesii 1704]
gi|237904617|gb|EEP79018.1| hypothetical protein UREG_03864 [Uncinocarpus reesii 1704]
Length = 446
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 209/351 (59%), Gaps = 22/351 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RT LTT DV AL++ +VEP+YG+ S PLRF A IG + LFY++D +V+F+
Sbjct: 48 MRHGKRTLLTTQDVSNALRVLDVEPLYGYESTRPLRFGEATIGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIA--------APSNGTNNEQKDG 110
+I APLP+ P + + HWLA+EGVQP IP+N P A + P+ N G
Sbjct: 108 LINAPLPKVPREITFTAHWLAVEGVQPTIPQN-PTSADSRNLELISKGPNANANLAAMSG 166
Query: 111 LP-VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTY 169
V +K VKHILS+ELQLYF+++ + S+ A SL D GLH LVPYF
Sbjct: 167 NENVTVKPLVKHILSKELQLYFERVCSAFLDESNEEYRLSAFASLKEDPGLHQLVPYFVQ 226
Query: 170 FVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLA 228
F++++V+ L + +L +M + L+QN + ++PY+ L+P V+TCL+ ++L G
Sbjct: 227 FISEKVTHSLKDLFVLTQMMHMTEALIQNKSLYVDPYVASLIPPVLTCLIGRQLEGGSDP 286
Query: 229 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
H+ LRD L+ I K+Y H +TL+ RL +T L +DP + HYGA+ GL ++
Sbjct: 287 LEHFTLRDLAGSLIGMISKKYSHSSHTLKPRLARTFLKNFMDPSKPFGTHYGAIIGLHSI 346
Query: 289 -GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNE--VKRHEAWRVYGALLQA 336
GP+V+R L++PNL Y E++L+ + +++ EA +V G ++ A
Sbjct: 347 GGPDVIRELIVPNLAMY------EVVLKDAAGDEGLRKLEAEKVIGVIVAA 391
>gi|119596994|gb|EAW76588.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa, isoform CRA_a [Homo sapiens]
Length = 667
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A ++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|426357184|ref|XP_004045927.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Gorilla gorilla gorilla]
Length = 734
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 115 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 174
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 175 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 234
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A ++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 235 LKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 294
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 295 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 353
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 354 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 413
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 414 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 453
>gi|115433052|ref|XP_001216663.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189515|gb|EAU31215.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 445
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/389 (37%), Positives = 221/389 (56%), Gaps = 30/389 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRHSRRT LTT D+ +AL++ +VEP+YG+ + PLRF A +G + LFY++D++V+F+
Sbjct: 48 MRHSRRTLLTTQDISQALRVLDVEPLYGYETTRPLRFGEASLGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNEQ-----KDG 110
+I APLP+ P + S HWLA+EGVQP IP+N A + + S G N
Sbjct: 108 LINAPLPKVPREISFTAHWLAVEGVQPSIPQNPTAADSRNLELLSKGPNANSTLAAMSGS 167
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKH+LS+ELQLYF+K+ + S A SL D GLH LVPYF F
Sbjct: 168 ANVAVKPLVKHVLSKELQLYFEKVCNAFLDESSEEYRTSAYSSLREDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLAD 229
++++V+ G+ + +L +MR+ L+QN + ++PY+ L+P ++TCL+ ++L GN
Sbjct: 228 ISEKVTHGMKDIFVLTQVMRMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGNADLS 287
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL- 288
+ LRD A L+ I K+Y H +TL+ RL ++ L LDP + YGA+ GL A+
Sbjct: 288 EQFALRDLAASLLGLIAKKYSHSSHTLKPRLARSCLKTFLDPLKPFGAQYGAIIGLHAVG 347
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIF 348
G VR+L++PNL Y +LL+ M + + +R EA RV L F
Sbjct: 348 GAEAVRVLIVPNLPTYGNLLKDGM----GEEDPRRPEAERVLKVL--------------F 389
Query: 349 PPLSSLPARSVWKTNGIVATLSNKRKTSM 377
L+SL NG T+++ +T +
Sbjct: 390 AVLASLREGRAPLANGDAGTVTDDLRTRL 418
>gi|392865593|gb|EAS31391.2| transcription initiation factor TFIID complex 60 kDa subunit
[Coccidioides immitis RS]
Length = 446
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 210/351 (59%), Gaps = 22/351 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RT LTT DV AL++ +VEP+YG+ S PL+F A IG + LFY++D +V+F+
Sbjct: 48 MRHGKRTLLTTQDVSNALRVLDVEPLYGYESTRPLKFGEATIGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIA--------APSNGTNNEQKDG 110
+I APLPR P + + HWLA+EGVQP IP+N P A + P+ N G
Sbjct: 108 LINAPLPRVPREITFTAHWLAVEGVQPTIPQN-PTSADSRNLELISKGPNANANLAAMSG 166
Query: 111 LP-VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTY 169
V +K VKHILS+ELQLYF+++ + S+ A SL D GLH LVPYF
Sbjct: 167 NENVTVKPLVKHILSKELQLYFERVCSAFLDESNEEYRLSAFASLKEDPGLHQLVPYFVQ 226
Query: 170 FVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLA 228
F++++V+ L + +L +M + L+QN + ++PY+ L+P V+TC++ ++L G
Sbjct: 227 FISEKVTHSLKDLFVLTQVMHMTEALIQNKTLYVDPYVASLIPPVLTCVIGRQLEGGSDP 286
Query: 229 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
+H+ LRD L+ I K+Y H +TL+ RL +T L +DP + HYGA+ GL ++
Sbjct: 287 LDHFTLRDLAGSLIGMISKKYSHSSHTLKPRLARTFLKNFMDPSKPFGTHYGAIIGLHSI 346
Query: 289 -GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNE--VKRHEAWRVYGALLQA 336
GP+V+R L++PNL Y E++L+ + +++ EA +V G +L A
Sbjct: 347 GGPDVIRELIIPNLPTY------EVVLKDVAGDEGLRKSEAEKVIGVILAA 391
>gi|427789039|gb|JAA59971.1| Putative transcription initiation factor tfiid subunit taf6 also
component of histone acetyltransfer [Rhipicephalus
pulchellus]
Length = 636
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/328 (42%), Positives = 196/328 (59%), Gaps = 28/328 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H++R L+T D D ALK++NVEP+YGF + FR A G R+LF++++K++E +V
Sbjct: 56 MGHAKRRKLSTFDFDNALKMKNVEPLYGFHCPDYVPFRYASGGGRELFFVEEKELELNEV 115
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTN----NEQ 107
I + LP+ PLD SI HWL+IEG+QP +PEN P V++I + + +
Sbjct: 116 INSQLPKLPLDVSIKAHWLSIEGIQPTVPENPPPVSKDLQRVESIDPVTKLSKVVVPGSK 175
Query: 108 KDGLP-----------VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
GLP V +K H LS E QLY+ +ITE V DS +AL SLA+
Sbjct: 176 VPGLPSKQERTKHVETVRVKQLATHELSVEQQLYYKEITEACVGSDDS-RRAEALQSLAS 234
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+++ V + NN + L L+R+V LL N + +E YLH+L+PSV
Sbjct: 235 DPGLHQMLPRLCTFISEGVKVNVVQNNLAFLIYLIRMVKALLDNQTLYLEKYLHELIPSV 294
Query: 215 VTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
TC+V+++L R DNHW LRDF ++L+A ICK + N +QTR+T+ AL + K
Sbjct: 295 ATCIVSRQLCTRPDVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSRALQNDKM 354
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNL 301
L HYGAV GLA LGP VVR +LP +
Sbjct: 355 PLASHYGAVSGLAELGPEVVRSFVLPRV 382
>gi|169776525|ref|XP_001822729.1| transcription initiation factor TFIID complex subunit [Aspergillus
oryzae RIB40]
gi|83771464|dbj|BAE61596.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391873896|gb|EIT82896.1| transcription initiation factor TFIID, subunit TAF6 [Aspergillus
oryzae 3.042]
Length = 445
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/350 (40%), Positives = 207/350 (59%), Gaps = 16/350 (4%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRHSRRT LTT D+ +AL++ +VEP+YG+ S PLRF A +G + LFY++D++V+F+
Sbjct: 48 MRHSRRTLLTTQDIAQALRVLDVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNEQ-----KDG 110
+I APLP+ P + S HWLA+EGVQP IP+N A + + S G N
Sbjct: 108 LINAPLPKVPREISFTAHWLAVEGVQPSIPQNPTSADSRNLELMSKGPNANSTLAAMSGS 167
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKH+LS+ELQLYF+K+ + S A SL D GLH LVPYF F
Sbjct: 168 GNVAVKPLVKHVLSKELQLYFEKVCNAFLDESSEEYRTSAYSSLREDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLAD 229
++++V+ GL + +L +MR+ L+QN + ++PY+ L+P ++T L+ ++L GN
Sbjct: 228 ISEKVTHGLKDIFVLTQVMRMAEALVQNKSLYVDPYVASLVPPILTSLIGRQLGGNADLS 287
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL- 288
+ LR+ A L+ I K+Y H +TL+ RL ++ L LDP + HYGA+ GL A+
Sbjct: 288 EQFALRELAASLLGLIAKKYSHSSHTLKPRLARSCLKTFLDPSKPFGAHYGAIIGLQAVG 347
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAG 338
G VR+L+LPNL Y +LL+ M E +R EA +V L G
Sbjct: 348 GAEAVRVLILPNLPTYGALLKDGMAEENP----RRPEAEKVLTVLFGVLG 393
>gi|347971557|ref|XP_313173.5| AGAP004254-PA [Anopheles gambiae str. PEST]
gi|333468721|gb|EAA08678.5| AGAP004254-PA [Anopheles gambiae str. PEST]
Length = 685
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/336 (41%), Positives = 201/336 (59%), Gaps = 27/336 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M HS+R L+ DVD +LK+RN+EP YGF + + FR A G R+L ++++K+V+ ++
Sbjct: 57 MHHSKRMKLSIADVDHSLKVRNIEPQYGFVARDFIPFRFASGGGRELHFIEEKEVDLTEM 116
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----VQAI-----AAPSNGTNNEQKD 109
++ P+ PL+ S+ HWLA+EGVQP +PEN P VQA+ A + TN +
Sbjct: 117 VQGQTPKIPLEPSLRAHWLAVEGVQPTVPENPPPLSKDVQALDSVNPAHKLDKTNQKDTT 176
Query: 110 GLP------------VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATD 157
G P V++K +H LS E QLY+ +ITE V SD +AL SL++D
Sbjct: 177 GKPTINKHKLKNSETVQVKQLAQHELSVEQQLYYKEITEACVG-SDEARRAEALTSLSSD 235
Query: 158 SGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVV 215
GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+P V
Sbjct: 236 PGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPALYLEKYLHELIPCVS 295
Query: 216 TCLVAKRLGNRLA-DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA 274
TC+V+++L R DNHW LRDF A+L+A ICK + N LQTR+T+ AL + K
Sbjct: 296 TCIVSRQLCMRPELDNHWALRDFAARLMAQICKTFNTSTNNLQTRVTRLFSAALQNDKTP 355
Query: 275 LTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEP 310
L+ YGA+QGL+ LG V ++ ++P L +EP
Sbjct: 356 LSSMYGALQGLSELGTEVTKVFIIPRLKFISERVEP 391
>gi|50949874|emb|CAH10485.1| hypothetical protein [Homo sapiens]
Length = 677
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A ++G E++ +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGATTADGKGKEKEAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|119183250|ref|XP_001242685.1| hypothetical protein CIMG_06581 [Coccidioides immitis RS]
Length = 1029
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 210/351 (59%), Gaps = 22/351 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RT LTT DV AL++ +VEP+YG+ S PL+F A IG + LFY++D +V+F+
Sbjct: 48 MRHGKRTLLTTQDVSNALRVLDVEPLYGYESTRPLKFGEATIGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIA--------APSNGTNNEQKDG 110
+I APLPR P + + HWLA+EGVQP IP+N P A + P+ N G
Sbjct: 108 LINAPLPRVPREITFTAHWLAVEGVQPTIPQN-PTSADSRNLELISKGPNANANLAAMSG 166
Query: 111 LP-VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTY 169
V +K VKHILS+ELQLYF+++ + S+ A SL D GLH LVPYF
Sbjct: 167 NENVTVKPLVKHILSKELQLYFERVCSAFLDESNEEYRLSAFASLKEDPGLHQLVPYFVQ 226
Query: 170 FVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLA 228
F++++V+ L + +L +M + L+QN + ++PY+ L+P V+TC++ ++L G
Sbjct: 227 FISEKVTHSLKDLFVLTQVMHMTEALIQNKTLYVDPYVASLIPPVLTCVIGRQLEGGSDP 286
Query: 229 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
+H+ LRD L+ I K+Y H +TL+ RL +T L +DP + HYGA+ GL ++
Sbjct: 287 LDHFTLRDLAGSLIGMISKKYSHSSHTLKPRLARTFLKNFMDPSKPFGTHYGAIIGLHSI 346
Query: 289 -GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNE--VKRHEAWRVYGALLQA 336
GP+V+R L++PNL Y E++L+ + +++ EA +V G +L A
Sbjct: 347 GGPDVIRELIIPNLPTY------EVVLKDVAGDEGLRKSEAEKVIGVILAA 391
>gi|1912080|dbj|BAA18922.1| TFIID subunit [Xenopus laevis]
Length = 618
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/335 (41%), Positives = 198/335 (59%), Gaps = 35/335 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LT D+D ALKL+NVEP+YGF L FR A G R+L + ++K+ + D+
Sbjct: 56 MHVGKRQKLTPSDIDAALKLKNVEPIYGFHPKEFLPFRYASGGGRELHFYEEKETDLSDI 115
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQA-----IAAPSN----- 101
I PLPR PLD S+ HWL+IEGVQP IPEN P +A +A P
Sbjct: 116 ISTPLPRVPLDVSLKAHWLSIEGVQPAIPENPPPVPKEQQKTEATEPLKVAKPGQEEGLP 175
Query: 102 --------GTNNEQK----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ 149
G E+K G P+++K H LS E QLY+ +ITE V ++ +
Sbjct: 176 GKGQGSGEGKGKEKKTAILKGAPLKLKPRSIHELSVEQQLYYKEITEACVGSCEAK-RAE 234
Query: 150 ALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYL 207
AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E YL
Sbjct: 235 ALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYL 294
Query: 208 HQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLN 266
H+L+P+V+TC+V+++L R DNHW LRDF A+L+A ICK + N +Q+R+TKT
Sbjct: 295 HELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKTFTK 354
Query: 267 ALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
+D + T YG++ GLA LG +VV+ L++P L
Sbjct: 355 TWVDDRTPWTTRYGSIAGLAELGADVVKTLIVPRL 389
>gi|390459096|ref|XP_002744053.2| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 6 [Callithrix jacchus]
Length = 731
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 111 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 170
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 171 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 230
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AA ++ E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 231 LKGKGQGAAAADSKGKEKKAPPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 290
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 291 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 349
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 350 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 409
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 410 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 449
>gi|403285894|ref|XP_003934245.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
1 [Saimiri boliviensis boliviensis]
gi|403285896|ref|XP_003934246.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Saimiri boliviensis boliviensis]
gi|403285898|ref|XP_003934247.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
3 [Saimiri boliviensis boliviensis]
Length = 678
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AA ++ E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGAATADSKGKEKKAPPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|11991529|emb|CAC19673.1| TAFII70 protein [Pleurodeles waltl]
Length = 649
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 201/339 (59%), Gaps = 39/339 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D AL+L+NVEP+YGF + + FR A G R+L++ D+K+V+ D+
Sbjct: 58 MSVGKRQKLTTCDIDSALRLKNVEPLYGFTANEFIPFRYASGGGRELYFYDEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIA---APSNGTNNEQKDGLPV 113
I PLPR PLD + HWL+IEGVQP IPEN AP Q A P Q +G P+
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGVQPAIPENPPPAPKQQKAEATEPLKAVKPGQDEGSPL 177
Query: 114 ---------------EIKLPV------------KHILSRELQLYFDKITELAVSRSDSVL 146
E K PV H LS E QLY+ +ITE V ++
Sbjct: 178 KGKGQSAITPDGKGKEKKPPVLKEGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAK- 236
Query: 147 FKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIE 204
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E
Sbjct: 237 RAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLE 296
Query: 205 PYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRY-GHVYNTLQTRLTK 262
YLH+L+P+V+TC+V+++L R DNHW LRDF A+L+A ICK + N +Q+R+TK
Sbjct: 297 KYLHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFNATTTNNIQSRITK 356
Query: 263 TLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
T + +D K A T YG++ GLA LG +VV+ L++P L
Sbjct: 357 TFTKSWVDDKTAWTTRYGSIAGLAELGHDVVKALIVPRL 395
>gi|344301463|gb|EGW31775.1| hypothetical protein SPAPADRAFT_62369 [Spathaspora passalidarum
NRRL Y-27907]
Length = 496
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 204/355 (57%), Gaps = 54/355 (15%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R L T D++ ALK+ NVEP+YG+ + PL F+ + G + L+Y+DD+++EF+
Sbjct: 56 MRHSKRKLLMTTDINHALKILNVEPLYGYDNSQPLSFKETLVGTGGQTLYYIDDQEIEFE 115
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-APVQAIAAP----------------- 99
+I LP+ P T+ HWLAIEGVQP++P+N P + + P
Sbjct: 116 KLINQELPKVPRQTTFTAHWLAIEGVQPMVPQNPLPSEIKSLPPIIRGATSSILGNDILS 175
Query: 100 -SNGTNNEQKDGLP-------------------VEIKLPVKHILSRELQLYFDKITELAV 139
+ G + KD P +E+K VKH+LS+EL+LYFDK+ E+ +
Sbjct: 176 FAGGAGVDGKDAQPGKDKKDSASAAAAAATERELEVKPLVKHVLSKELKLYFDKVVEVLI 235
Query: 140 SR--SDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQ 197
S L + AL SL +D GLH LVPYFT FV+ +++ L N +L ++ V+ L++
Sbjct: 236 SSDPEKEPLRQAALSSLRSDPGLHQLVPYFTQFVSAQITDQLRNIDILITMLEVISALVE 295
Query: 198 NPHIQIEPYLHQLMPSVVTCLVAKRLG-----------NRLADNHWELRDFTAKLVAAIC 246
N I + PY+H LMPS++T L+AKR+G L ++R F + L+ I
Sbjct: 296 NKTIFLNPYVHALMPSILTLLLAKRIGPVIKETTTKESQELLMRQLQVRTFASILLKHII 355
Query: 247 KRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
+ YG Y+TL+ R+T+TLL ALLD + + HYGA+ GL +GP V++L+L+ NL
Sbjct: 356 EVYGSSYSTLRPRVTRTLLRALLDYSKPMETHYGALLGLKNMGPEVIKLVLIGNL 410
>gi|50423941|ref|XP_460555.1| DEHA2F04356p [Debaryomyces hansenii CBS767]
gi|49656224|emb|CAG88873.1| DEHA2F04356p [Debaryomyces hansenii CBS767]
Length = 494
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 139/358 (38%), Positives = 204/358 (56%), Gaps = 47/358 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R L T D++ ALK+ N+EP+YG+ + PL F+ A+ G + L+Y+D+ ++EF+
Sbjct: 58 MRHSKRKLLMTSDINHALKILNIEPLYGYDNSQPLSFKEALVGAGGQTLYYIDNHEIEFE 117
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-APVQAIAAP----------------- 99
+I LP P T+ HWLAIEGVQP+IP+N P + + P
Sbjct: 118 KLINQELPSVPRQTTFTAHWLAIEGVQPMIPQNPLPSEIKSLPPIIRGATSSILGNDILN 177
Query: 100 ---SN-------------GTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSR-- 141
SN G N++ VE+K VKH+LS+EL+LYFDK+ E+ +S
Sbjct: 178 SGFSNENSVKDAPNGADAGAKNKKLTEKEVEVKPLVKHVLSKELKLYFDKVVEVLISTDP 237
Query: 142 SDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHI 201
L A+ SL D GLH LVPYF FVA++++ L N +L ++ V+ L N I
Sbjct: 238 EKESLKYAAINSLKNDPGLHQLVPYFIQFVAEQITNQLRNIDILSTMLEVISALADNKTI 297
Query: 202 QIEPYLHQLMPSVVTCLVAKRLG--------NRLADNHWELRDFTAKLVAAICKRYGHVY 253
++PY+H LMP ++T L+AKR+G N + N +R+F A L+ I K YG Y
Sbjct: 298 FLDPYVHALMPCILTLLLAKRIGPIIKDNSSNEVLKNQLAVREFAAILLEHIIKVYGSSY 357
Query: 254 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPE 311
+TL+ R+T+TLL ALLD + + HYGA+ GL +G VV+L+L+ NL + L+ E
Sbjct: 358 STLKPRVTRTLLRALLDSSKPIGTHYGALLGLKNMGNEVVKLVLIGNLKMWCKLVVDE 415
>gi|303319711|ref|XP_003069855.1| TATA box binding protein associated factor containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240109541|gb|EER27710.1| TATA box binding protein associated factor containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|320034141|gb|EFW16086.1| TAF6 RNA polymerase 2 [Coccidioides posadasii str. Silveira]
Length = 446
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 137/351 (39%), Positives = 209/351 (59%), Gaps = 22/351 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RT LTT DV AL++ +VEP+YG+ S PL+F A IG + LFY++D +V+F+
Sbjct: 48 MRHGKRTLLTTQDVSNALRVLDVEPLYGYESTRPLKFGEATIGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIA--------APSNGTNNEQKDG 110
+I APLPR P + + HWLA+EGVQP IP+N P A + P+ N G
Sbjct: 108 LINAPLPRVPREITFTAHWLAVEGVQPTIPQN-PTSADSRNLELISKGPNANANLAAMSG 166
Query: 111 LP-VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTY 169
V +K VKHILS+ELQLYF+++ + S+ A SL D GLH LVPYF
Sbjct: 167 NENVTVKPLVKHILSKELQLYFERVCSAFLDESNEEYRLSAFASLKEDPGLHQLVPYFVQ 226
Query: 170 FVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLA 228
F++++V+ L + +L +M + L+QN + ++PY+ L+P V+TC++ ++L G
Sbjct: 227 FISEKVTHSLKDLFVLTQVMHMTEALIQNKTLYVDPYVASLIPPVLTCVIGRQLEGGSDP 286
Query: 229 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
+H+ LRD L+ I K+Y H + L+ RL +T L +DP + HYGA+ GL ++
Sbjct: 287 LDHFTLRDLAGSLIGMISKKYSHSSHRLKPRLARTFLKNFMDPSKPFGTHYGAIIGLHSI 346
Query: 289 -GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNE--VKRHEAWRVYGALLQA 336
GP+V+R L++PNL Y E++L+ + +++ EA +V G +L A
Sbjct: 347 GGPDVIRELIIPNLPTY------EVVLKDVAGDEGLRKSEAEKVIGVILAA 391
>gi|260947084|ref|XP_002617839.1| hypothetical protein CLUG_01298 [Clavispora lusitaniae ATCC 42720]
gi|238847711|gb|EEQ37175.1| hypothetical protein CLUG_01298 [Clavispora lusitaniae ATCC 42720]
Length = 497
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/350 (39%), Positives = 199/350 (56%), Gaps = 49/350 (14%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R LTT D++ ALK+ N+EP+YG+ PL F+ A+ + L+Y+DD +VEF+
Sbjct: 58 MRHSKRKMLTTGDINHALKVLNIEPLYGYDQSQPLVFKEALFGASGQTLYYIDDNEVEFE 117
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN--------APVQAIAAPSNGTNNE--- 106
+I LP+ P T+ HWLAIEGVQP+IP+N P A S+ NN+
Sbjct: 118 KLINQELPKVPRQTTFTAHWLAIEGVQPMIPQNPLASEIKNLPAIVRGATSSVLNNDLLN 177
Query: 107 -----------------QKDGLP----VEIKLPVKHILSRELQLYFDKITELAVSR--SD 143
QK VE+K VKH+LS+EL+LYFDK+ E+ +S
Sbjct: 178 NSSTTSTVAGEDSKEQGQKKKAAGDKDVEVKPLVKHVLSKELKLYFDKVVEVLISTDAEK 237
Query: 144 SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQI 203
L + AL SL TD GLH LVPYF FVA++++ L N +L ++ V+ L N I +
Sbjct: 238 ESLREAALSSLRTDPGLHQLVPYFIQFVAEQITNQLRNIDVLITMLDVISALYDNKTIFL 297
Query: 204 EPYLHQLMPSVVTCLVAKRLGNRLADN------------HWELRDFTAKLVAAICKRYGH 251
PY+H LMP ++T L+AKR+G + +N + +R+F + L+ + YG
Sbjct: 298 APYVHALMPCILTLLLAKRIGPPIKENSDDAAITNLLKGQFAVREFASLLLEHVINSYGS 357
Query: 252 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
Y+TL R+T+TLL ALLD + + HYGA+ GL LG V++L+L+ NL
Sbjct: 358 SYSTLTPRVTRTLLRALLDSSKPIGTHYGALLGLEKLGSEVIKLVLVGNL 407
>gi|156395880|ref|XP_001637338.1| predicted protein [Nematostella vectensis]
gi|156224449|gb|EDO45275.1| predicted protein [Nematostella vectensis]
Length = 662
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 197/344 (57%), Gaps = 44/344 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M+ S+R L T D+D AL+L+NVEP+YGF + + FR A G R++F+ DD +++ DV
Sbjct: 60 MQKSKRKKLMTKDIDNALRLQNVEPLYGFVAQDFIPFRFASGGGREVFFYDDPEIDLNDV 119
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP---------------VQAIAAPSNGTN 104
I LPR P+D S+ HWL+IEG+QP IPEN P AAP
Sbjct: 120 INTQLPRIPVDVSLKAHWLSIEGLQPAIPENPPPALADQLKREEQKPVFTTKAAPDKTKP 179
Query: 105 NEQKDGLPVEIK--------------LP----------VKHILSRELQLYFDKITELAVS 140
+++ V+ K +P V H LS E QLY+ +ITE V
Sbjct: 180 GQKRPKAEVDSKSNKKPAITKHTISSIPSNKADKTKGLVTHELSVEQQLYYKEITEACVG 239
Query: 141 RSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVWNLLQN 198
+S +AL SLATD GL+ ++P F F+++ V+ NN LL LMR+V LL N
Sbjct: 240 SCES-RRTEALQSLATDPGLYQMLPRFCTFISEGVRVNVAQNNLVLLIYLMRMVKALLDN 298
Query: 199 PHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQ 257
+ +E YLH+++P+VVTC+V+K+L + DNHW LRDF A+LVA IC+ + N++Q
Sbjct: 299 STLFLEKYLHEMIPAVVTCVVSKQLCPKPEVDNHWALRDFGARLVAQICRSFNSTTNSVQ 358
Query: 258 TRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
TR+TKT AL K L HYGA+ GLA LG V+++L+LP L
Sbjct: 359 TRVTKTYCKALHQEKAPLATHYGAITGLAELGQEVIKVLVLPRL 402
>gi|170032690|ref|XP_001844213.1| transcription initiation factor TFIID subunit 6 [Culex
quinquefasciatus]
gi|167873043|gb|EDS36426.1| transcription initiation factor TFIID subunit 6 [Culex
quinquefasciatus]
Length = 614
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/328 (40%), Positives = 196/328 (59%), Gaps = 28/328 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M HS+R ++ D+D +LK+RN+EP YGF S + FR A G R+L ++++K+++ +V
Sbjct: 57 MHHSKRMKMSIADIDHSLKVRNIEPQYGFVSPDFIPFRFASGGGRELHFIEEKEIDLAEV 116
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----VQAI------------------ 96
I+ P+ PLD ++ HWL ++GVQP IPEN P VQA+
Sbjct: 117 IQTAPPKIPLDITLRAHWLCVDGVQPTIPENPPPLSKDVQALDSVNPVNKLDKAHIKDTT 176
Query: 97 AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
P+ G ++ K+ V +K H LS E QLY+ +ITE V SD +AL SLA
Sbjct: 177 GKPAIGKAHKLKNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEALTSLAC 235
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV
Sbjct: 236 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPALYLEKYLHELIPSV 295
Query: 215 VTCLVAKRLGNRLA-DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
TC+V+++L R DNHW LRDF A+L+A ICK + N LQTR+T+ AL + K
Sbjct: 296 STCIVSRQLCMRPELDNHWALRDFAARLMAQICKNFNTSTNNLQTRVTRLFSAALQNDKT 355
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNL 301
L+ YGA++GL+ LG V+++ ++P L
Sbjct: 356 PLSSLYGALEGLSELGTEVIKVFIIPRL 383
>gi|240277671|gb|EER41179.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces capsulatus H143]
Length = 470
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 213/364 (58%), Gaps = 26/364 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH++RT LTT DV AL++ +VEP+YG+ S PLRF A +G + LFY++D +V+F+
Sbjct: 48 MRHAKRTLLTTQDVSHALRVLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP-- 112
+I APLPR P + + HWLA+EGVQP IP+N A + + S G N N +
Sbjct: 108 LINAPLPRVPREITFTAHWLAVEGVQPTIPQNPAGADSRNLELVSKGPNANANLAAMSGN 167
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKHILS+ELQLYF+K+ + + A SL D GLH LVPYF F
Sbjct: 168 DNVTVKPLVKHILSKELQLYFEKVCTAFLDELNDEYRLSAFSSLKDDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL--A 228
++++V+ L + +L +M + L+QN + ++PY+ L+P V+TCL+ ++LG A
Sbjct: 228 ISEKVTHSLKDLFVLTQVMHMTEALIQNKTLYVDPYVPSLIPPVLTCLLGRQLGTSTGAA 287
Query: 229 DN--HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
D+ H+ LRD A L++ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL
Sbjct: 288 DHLEHFALRDLAASLISMIARKYSHSSHTLRPRLARTFLRDFLDPGKPLGTHYGAIIGLQ 347
Query: 287 ALGP-NVVRLLLLPNLGPYLSLLEPEMLLEKQ-----------KNEVKRHEAWRVYGALL 334
++G +VVR L++PNL Y +L+ + V+R EA +V G +L
Sbjct: 348 SIGGVDVVRELIVPNLKTYEIVLKDATATTTGAGAGASAGSGVEETVRRLEAEKVIGVIL 407
Query: 335 QAAG 338
G
Sbjct: 408 AVLG 411
>gi|351695509|gb|EHA98427.1| Transcription initiation factor TFIID subunit 6 [Heterocephalus
glaber]
Length = 677
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 198/339 (58%), Gaps = 39/339 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQKDG- 110
I PLPR PLD + HWL+IEG QP IPEN P +A + +++DG
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 111 --------LPVEIKLPVK-----------------HILSRELQLYFDKITELAVSRSDSV 145
P + K K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGATPADSKGKFKAPPLLEGASLRLKPRSIHELSVEQQLYYKEITEACVGSCEAK 237
Query: 146 LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQI 203
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +
Sbjct: 238 R-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYL 296
Query: 204 EPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTK 262
E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TK
Sbjct: 297 EKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITK 356
Query: 263 TLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
T + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 TFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 395
>gi|242792547|ref|XP_002481976.1| transcription initiation factor TFIID complex 60 kDa subunit
[Talaromyces stipitatus ATCC 10500]
gi|218718564|gb|EED17984.1| transcription initiation factor TFIID complex 60 kDa subunit
[Talaromyces stipitatus ATCC 10500]
Length = 447
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/321 (42%), Positives = 198/321 (61%), Gaps = 13/321 (4%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH RRT LTT D+ AL++ NVEP+YG+ S PLRF A +G + LFY++D++V+F+
Sbjct: 48 MRHGRRTVLTTQDISHALRVLNVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP------VQAIA-APSNGTNNEQKDG- 110
+I APLP+ P + + HWLA+EGVQP+IP+N ++ +A P+ N G
Sbjct: 108 LINAPLPKVPREVTFTAHWLAVEGVQPLIPQNPTSNDSRNLELVAKGPNTNPNLAALSGN 167
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
+K VKHILS+ELQLYF+K+ + ++ A SL D GLH LVPYF F
Sbjct: 168 QNTAVKPLVKHILSKELQLYFEKVCNAFLDQASEEYRTSAYSSLREDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLA 228
+A++V+ LNN +L +MR+ ++QN + I+PY+ L+P V+TCLV ++ G N
Sbjct: 228 IAEKVTHSLNNIFVLTQVMRMAEAMIQNQSLYIDPYISALVPPVLTCLVGRQFGGSNNEL 287
Query: 229 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
+ LRD A L+ I K+Y H +TL+ R+ ++ L LDP + HYGA+ GL A+
Sbjct: 288 SEQFALRDLAAALLGMIAKKYSHASHTLKPRIARSCLKNFLDPAKPFGTHYGAIMGLHAI 347
Query: 289 -GPNVVRLLLLPNLGPYLSLL 308
G +VVR L+LPNL PY LL
Sbjct: 348 GGADVVRELILPNLKPYEKLL 368
>gi|354496707|ref|XP_003510467.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Cricetulus griseus]
gi|344248936|gb|EGW05040.1| Transcription initiation factor TFIID subunit 6 [Cricetulus
griseus]
Length = 678
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 197/340 (57%), Gaps = 40/340 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQKDG- 110
I PLPR PLD + HWL+IEG QP IPEN P +A + +++DG
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 111 --------------------------LPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
P +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGAAAADAKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQ 202
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 238 KR-AEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLY 296
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+T
Sbjct: 297 LEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRIT 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
KT + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 357 KTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 396
>gi|407926143|gb|EKG19113.1| TATA box binding protein associated factor (TAF) [Macrophomina
phaseolina MS6]
Length = 448
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/345 (40%), Positives = 209/345 (60%), Gaps = 32/345 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRHS+RTTL+T D+ +AL++ +VEP+YG+ S PLRF A +G + LFY++D++V+F+
Sbjct: 48 MRHSKRTTLSTQDISQALRVLDVEPLYGYESTRPLRFGEASMGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIA----------------APSNG 102
+I APLP+ P + S HWLA+EGVQP I +N P A + A NG
Sbjct: 108 LINAPLPKVPREISFTAHWLALEGVQPAIAQN-PTSADSRHQDLLPKGPGANPYLAAVNG 166
Query: 103 TNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFK-QALVSLATDSGLH 161
+N V +K VKH++S+ELQLYFD+I A+ +D+ ++ QAL SL TD GLH
Sbjct: 167 YDN-------VAVKPLVKHVISKELQLYFDRIVS-ALGDADNEEWRAQALGSLRTDPGLH 218
Query: 162 PLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 221
LVPYF ++A++V+ + + +L +M + LL NP + ++ Y+ L+ V+TCL+ K
Sbjct: 219 QLVPYFVQYIAEKVTHNMKDLFILTQMMHMTSALLTNPSLYMDAYITGLVAPVLTCLMGK 278
Query: 222 RLGNRLADN---HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQH 278
RLG+ N H++LRD ++ I KRYG+ TL+ RL TL LD K+ H
Sbjct: 279 RLGSGSEGNPLAHFDLRDLAGTIIIEIAKRYGNSSQTLKKRLAATLCKNFLDDKKPCGTH 338
Query: 279 YGAVQGLAA-LGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVK 322
YGA+ GL +G + V+ L+LPNL + ++L+ + E K E +
Sbjct: 339 YGAILGLQGIMGSDGVKFLILPNLKLFDAVLKERLADEATKAEAE 383
>gi|154285430|ref|XP_001543510.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407151|gb|EDN02692.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 472
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/366 (39%), Positives = 213/366 (58%), Gaps = 28/366 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH++RT LTT DV AL++ +VEP+YG+ S PLRF A +G + LFY++D +V+F+
Sbjct: 48 MRHAKRTLLTTQDVSHALRVLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP-- 112
+I APLPR P + + HWLA+EGVQP IP+N A + + S G N N +
Sbjct: 108 LINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTGADSRNLELVSKGPNANANLAAMSGH 167
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKHILS+ELQLYF+K+ + + A SL D GLH LVPYF F
Sbjct: 168 DNVTVKPLVKHILSKELQLYFEKVCTAFLDELNDEYRLSAFSSLKDDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL--A 228
++++V+ L + +L +M + L+QN + ++PY+ L+P V+TCL+ ++LG A
Sbjct: 228 ISEKVTHSLKDLFVLTQVMHMTEALIQNKTLYVDPYVPSLIPPVLTCLLGRQLGTSTGAA 287
Query: 229 DN--HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
D+ H+ LRD A L++ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL
Sbjct: 288 DHLEHFALRDLAASLISMIARKYSHSSHTLRPRLARTFLRDFLDPGKPLGTHYGAIIGLQ 347
Query: 287 ALGP-NVVRLLLLPNLGPYLSLLEPEMLLEKQ-------------KNEVKRHEAWRVYGA 332
++G +VVR L++PNL Y +L+ + V+R EA +V G
Sbjct: 348 SIGGVDVVRELIVPNLKTYEIVLKDATATTTGAGAGAGAGAGSGVEETVRRLEAEKVIGV 407
Query: 333 LLQAAG 338
+L G
Sbjct: 408 ILAVLG 413
>gi|325093755|gb|EGC47065.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces capsulatus H88]
Length = 629
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 213/364 (58%), Gaps = 26/364 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH++RT LTT DV AL++ +VEP+YG+ S PLRF A +G + LFY++D +V+F+
Sbjct: 48 MRHAKRTLLTTQDVSHALRVLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP-- 112
+I APLPR P + + HWLA+EGVQP IP+N A + + S G N N +
Sbjct: 108 LINAPLPRVPREITFTAHWLAVEGVQPTIPQNPAGADSRNLELVSKGPNANANLAAMSGN 167
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKHILS+ELQLYF+K+ + + A SL D GLH LVPYF F
Sbjct: 168 DNVTVKPLVKHILSKELQLYFEKVCTAFLDELNDEYRLSAFSSLKDDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL--A 228
++++V+ L + +L +M + L+QN + ++PY+ L+P V+TCL+ ++LG A
Sbjct: 228 ISEKVTHSLKDLFVLTQVMHMTEALIQNKTLYVDPYVPSLIPPVLTCLLGRQLGTSTGAA 287
Query: 229 DN--HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
D+ H+ LRD A L++ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL
Sbjct: 288 DHLEHFALRDLAASLISMIARKYSHSSHTLRPRLARTFLRDFLDPGKPLGTHYGAIIGLQ 347
Query: 287 ALGP-NVVRLLLLPNLGPYLSLLEPEMLLEKQ-----------KNEVKRHEAWRVYGALL 334
++G +VVR L++PNL Y +L+ + V+R EA +V G +L
Sbjct: 348 SIGGVDVVRELIVPNLKTYEIVLKDATATTTGAGAGASAGSGVEETVRRLEAEKVIGVIL 407
Query: 335 QAAG 338
G
Sbjct: 408 AVLG 411
>gi|302506222|ref|XP_003015068.1| hypothetical protein ARB_06828 [Arthroderma benhamiae CBS 112371]
gi|291178639|gb|EFE34428.1| hypothetical protein ARB_06828 [Arthroderma benhamiae CBS 112371]
Length = 443
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 217/377 (57%), Gaps = 34/377 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RT LTT DV AL++ +VEP+YG+ S PLRF A IG + LFY++D +V+F+
Sbjct: 48 MRHGKRTLLTTQDVSNALRVLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNE-----QKDG 110
+I APLP+ P + S + A+EGVQP IP+N A + + S G N
Sbjct: 108 LINAPLPKVPREIS----FTAVEGVQPTIPQNPTAADTRHLELVSKGPNANANLAAMSGN 163
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKHILS ELQLYF+++ + S+ A SL D GLH LVPYF F
Sbjct: 164 ENVNVKPLVKHILSNELQLYFERVCNAFLDESNEEFRNSAFSSLKEDPGLHQLVPYFVQF 223
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLAD 229
++++V+ + + +L +M ++ L++NP + I+PY+ L+P V+TCL+ ++LG + A
Sbjct: 224 ISEKVTHNIKDIFVLTQVMHMIEALIRNPTLYIDPYVAPLIPPVLTCLIGRQLGSSNDAV 283
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL- 288
H+ LRD ++ LV I K+Y +TL+ RL +T L LDP + HYGA+ GL ++
Sbjct: 284 EHFALRDLSSSLVGMIAKKYSQSSHTLKPRLARTFLKTFLDPGQTFGAHYGAIIGLQSIG 343
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIF 348
GPNV+R L++PNL Y +L+ + E +++ EA +V G ++
Sbjct: 344 GPNVIRELIIPNLPVYEVVLKDAVTDEG----LRKAEAEKVTGVIIAV------------ 387
Query: 349 PPLSSLPARSVWKTNGI 365
LS++ S+ TNG
Sbjct: 388 --LSTIQDESLAHTNGF 402
>gi|302657451|ref|XP_003020447.1| hypothetical protein TRV_05467 [Trichophyton verrucosum HKI 0517]
gi|291184282|gb|EFE39829.1| hypothetical protein TRV_05467 [Trichophyton verrucosum HKI 0517]
Length = 443
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 217/377 (57%), Gaps = 34/377 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RT LTT DV AL++ +VEP+YG+ S PLRF A IG + LFY++D +V+F+
Sbjct: 48 MRHGKRTLLTTQDVSNALRVLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNE-----QKDG 110
+I APLP+ P + S + A+EGVQP IP+N A + + S G N
Sbjct: 108 LINAPLPKVPREIS----FTAVEGVQPTIPQNPTAADTRHLELVSKGPNANANLAAMSGN 163
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKHILS ELQLYF+++ + S+ A SL D GLH LVPYF F
Sbjct: 164 ENVNVKPLVKHILSNELQLYFERVCNAFLDESNEEFRNSAFSSLKEDPGLHQLVPYFVQF 223
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLAD 229
++++V+ + + +L +M ++ L++NP + I+PY+ L+P V+TCL+ ++LG + A
Sbjct: 224 ISEKVTHNIKDVFVLTQVMHMIEALIRNPTLYIDPYVAPLIPPVLTCLIGRQLGSSNDAV 283
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL- 288
H+ LRD ++ LV I K+Y +TL+ RL +T L LDP + HYGA+ GL ++
Sbjct: 284 EHFALRDLSSSLVGMIAKKYSQSSHTLKPRLARTFLKTFLDPGQTFGAHYGAIIGLQSIG 343
Query: 289 GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIF 348
GPNV+R L++PNL Y +L+ + E +++ EA +V G ++
Sbjct: 344 GPNVIRELIIPNLPVYEVVLKDAVTDEG----LRKAEAEKVTGVIIAV------------ 387
Query: 349 PPLSSLPARSVWKTNGI 365
LS++ S+ TNG
Sbjct: 388 --LSTIQDESLAHTNGF 402
>gi|157114938|ref|XP_001652495.1| transcription initiation factor TFIID subunit 6 [Aedes aegypti]
gi|108877125|gb|EAT41350.1| AAEL006988-PA [Aedes aegypti]
Length = 619
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 198/327 (60%), Gaps = 27/327 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M HS+R ++ D+D +LK+RN+EP YGF S + FR A G R+L ++++K+++ DV
Sbjct: 57 MHHSKRMKMSIADIDHSLKVRNIEPQYGFVSPDFIPFRFASGGGRELHFIEEKEIDLADV 116
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----VQAIAA--PSNGTNNEQ-KD-- 109
I+ P+ PLD ++ HWL ++GVQP IPEN P +QA+ + P N + KD
Sbjct: 117 IQTAPPKIPLDITLRAHWLCVDGVQPTIPENPPPLSKDLQALDSVNPVNKLDRAHLKDTT 176
Query: 110 GLP------------VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATD 157
G P V +K H LS E QLY+ +ITE V SD +AL SLA D
Sbjct: 177 GKPAIKAQKLKNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEALQSLACD 235
Query: 158 SGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVV 215
GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV
Sbjct: 236 PGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPALYLEKYLHELIPSVS 295
Query: 216 TCLVAKRLGNRLA-DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA 274
TC+V+++L R DNHW LRDF A+L+A ICK + N LQTR+T+ +AL + K
Sbjct: 296 TCIVSRQLCMRPELDNHWALRDFAARLMAQICKNFNTSTNNLQTRVTRLFSSALQNDKTP 355
Query: 275 LTQHYGAVQGLAALGPNVVRLLLLPNL 301
L+ YGA++GL+ LG V+++ ++P L
Sbjct: 356 LSSLYGALEGLSELGTEVIKVFIIPRL 382
>gi|225557125|gb|EEH05412.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces capsulatus G186AR]
Length = 491
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 213/370 (57%), Gaps = 32/370 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH++RT LTT DV AL++ +VEP+YG+ S PLRF A +G + LFY++D +V+F+
Sbjct: 48 MRHAKRTLLTTQDVSHALRVLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP-- 112
+I APLPR P + + HWLA+EGVQP IP+N A + + S G N N +
Sbjct: 108 LINAPLPRVPREITFTAHWLAVEGVQPTIPQNPAGADSRNLELVSKGPNANANLAAMSGN 167
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKHILS+ELQLYF+K+ + + A SL D GLH LVPYF F
Sbjct: 168 DNVTVKPLVKHILSKELQLYFEKVCTAFLDELNDEYRLSAFSSLKDDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL--A 228
++++V+ L + +L +M + L+QN + ++PY+ L+P V+TCL+ ++LG A
Sbjct: 228 ISEKVTHSLKDLFVLTQVMHMTEALIQNKTLYVDPYVPSLIPPVLTCLLGRQLGTSTGAA 287
Query: 229 DN--HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
D+ H+ LRD A L++ I ++Y H +TL+ RL +T L LDP + L HYGA+ GL
Sbjct: 288 DHLEHFALRDLAASLISMIARKYSHSSHTLRPRLARTFLRDFLDPGKPLGTHYGAIIGLQ 347
Query: 287 ALGP-NVVRLLLLPNLGPYLSLLEPEMLLEKQ-----------------KNEVKRHEAWR 328
++G +VVR L++PNL Y +L+ + V+R EA +
Sbjct: 348 SIGGVDVVRELIVPNLKTYEIVLKDATATTTGAGAGAGAGAGASAGSGVEETVRRLEAEK 407
Query: 329 VYGALLQAAG 338
V G +L G
Sbjct: 408 VIGVILAVLG 417
>gi|344234314|gb|EGV66184.1| DUF1546-domain-containing protein [Candida tenuis ATCC 10573]
gi|344234315|gb|EGV66185.1| hypothetical protein CANTEDRAFT_112664 [Candida tenuis ATCC 10573]
Length = 490
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 203/345 (58%), Gaps = 44/345 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MR S+R LTT D++ +LK+ N+EP+YG+ + PL+F+ A+ G + L+Y+DD+++E +
Sbjct: 58 MRRSKRKLLTTGDINHSLKVLNIEPLYGYDNSQPLQFKEALVAAGGQTLYYIDDQEIELE 117
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-APVQAIAAP----------------- 99
+I LP+ P T+ HWLAIEGVQP+IP+N +P + + P
Sbjct: 118 KLINQELPKVPRQTTFTAHWLAIEGVQPIIPQNPSPAEIKSLPPAIRGATSSILGNDILN 177
Query: 100 ----------SNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSR--SDSVLF 147
S G+ N++ E+K VKH+LS+EL+LYFDK+ ++ +S+ L
Sbjct: 178 AAGNTEKNIMSTGSKNKKVTDKDTEVKPLVKHVLSKELKLYFDKVVDVLLSKDPEKEGLQ 237
Query: 148 KQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYL 207
AL SL D GLH LVPYF FVA++++ L + +L +++V+ L N I ++PY+
Sbjct: 238 NSALNSLKNDPGLHQLVPYFIQFVAEQITNQLRDIDILTTMLQVISALADNRSIFLDPYV 297
Query: 208 HQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYNTL 256
H LMP ++T L+AK +G + D + E +R+F A L+ I YG Y+TL
Sbjct: 298 HALMPCILTLLLAKNIGPNVKDFNDENGKSALKRNLAVREFAAILLKHIIVVYGSSYSTL 357
Query: 257 QTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
+ R+T+TLL ALLD + + HYGA+ GL +G V++L+L+ NL
Sbjct: 358 KARVTRTLLRALLDSSKPIGTHYGALLGLKNMGNEVIKLVLIGNL 402
>gi|242015350|ref|XP_002428322.1| transcription initiation factor TFIID subunit, putative [Pediculus
humanus corporis]
gi|212512918|gb|EEB15584.1| transcription initiation factor TFIID subunit, putative [Pediculus
humanus corporis]
Length = 542
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 190/329 (57%), Gaps = 31/329 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H +R L T DVD ALK++N+EPVYGF + FR A G R+L ++++K+V+ ++
Sbjct: 56 MHHGKREKLCTGDVDNALKMKNIEPVYGFFVPDHIPFRFASGGGRELHFIEEKEVDLNEI 115
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------VQAIAAPSNGTNNEQK 108
APLP+ PL+ S+ HWL IEGVQP IPEN P V I S+ N +
Sbjct: 116 TSAPLPKLPLEISLRAHWLVIEGVQPTIPENPPPISKEMQRLESVDPICKLSHNQNGKDI 175
Query: 109 DGLP-------------VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLA 155
G P V +K H LS E QLY+ +ITE + SD +AL SLA
Sbjct: 176 PGKPTTGKLQKLKNVETVHVKQLATHELSVEQQLYYKEITE---AWSDEGRRAEALQSLA 232
Query: 156 TDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPS 213
D GLH ++P F+ + V + NN +LL LMR+V LL N + +E YLH+L+PS
Sbjct: 233 CDPGLHEMLPRMCTFITEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELIPS 292
Query: 214 VVTCLVAKRLGNRLA-DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPK 272
V TC+V+K+L R DNHW LRDF ++L+A IC + N +Q+R+T+ AL K
Sbjct: 293 VATCIVSKQLCMRPELDNHWALRDFASRLLAQICNNFNTSTNNVQSRITRLFSRALQGEK 352
Query: 273 RALTQHYGAVQGLAALGPNVVRLLLLPNL 301
L+ YGA+QGL+ LG VV++L+LP +
Sbjct: 353 APLSSLYGAIQGLSELGTEVVKVLILPKI 381
>gi|427778557|gb|JAA54730.1| Putative transcription initiation factor tfiid subunit taf6 also
component of histone acetyltransfer [Rhipicephalus
pulchellus]
Length = 657
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/350 (40%), Positives = 198/350 (56%), Gaps = 51/350 (14%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGF----------ASGG-------------PLRF 37
M H++R L+T D D ALK++NVEP+YGF ASG P R+
Sbjct: 56 MGHAKRRKLSTFDFDNALKMKNVEPLYGFHCPDYVPFRYASGXXXPLYGFHCPDYVPFRY 115
Query: 38 RRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP----- 92
G R+LF++++K++E +VI + LP+ PLD SI HWL+IEG+QP +PEN P
Sbjct: 116 ASG-GGRELFFVEEKELELNEVINSQLPKLPLDVSIKAHWLSIEGIQPTVPENPPPVSKD 174
Query: 93 ---VQAIAAPSNGTN----NEQKDGLP-----------VEIKLPVKHILSRELQLYFDKI 134
V++I + + + GLP V +K H LS E QLY+ +I
Sbjct: 175 LQRVESIDPVTKLSKVVVPGSKVPGLPSKQERTKHVETVRVKQLATHELSVEQQLYYKEI 234
Query: 135 TELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVV 192
TE V DS +AL SLA+D GLH ++P F+++ V + NN + L L+R+V
Sbjct: 235 TEACVGSDDS-RRAEALQSLASDPGLHQMLPRLCTFISEGVKVNVVQNNLAFLIYLIRMV 293
Query: 193 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGH 251
LL N + +E YLH+L+PSV TC+V+++L R DNHW LRDF ++L+A ICK +
Sbjct: 294 KALLDNQTLYLEKYLHELIPSVATCIVSRQLCTRPDVDNHWALRDFASRLMAQICKNFNT 353
Query: 252 VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
N +QTR+T+ AL + K L HYGAV GLA LGP VVR +LP +
Sbjct: 354 STNNVQTRVTRMFSRALQNDKMPLASHYGAVSGLAELGPEVVRSFVLPRV 403
>gi|194751481|ref|XP_001958055.1| GF23708 [Drosophila ananassae]
gi|190625337|gb|EDV40861.1| GF23708 [Drosophila ananassae]
Length = 619
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 195/340 (57%), Gaps = 28/340 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M HS+R L+ D+D +LK+RNVEP YGF + + FR A G R+L + +DK+++ ++
Sbjct: 65 MHHSKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLSEI 124
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAI 96
+ + PLD ++ HW +EGVQP +PEN P A
Sbjct: 125 TSSNTVKIPLDITLRSHWFVVEGVQPTVPENPPPLSKDSQFLDSVNPVIKLDQGLNKDAA 184
Query: 97 AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL +
Sbjct: 185 GKPTTGKMHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGS 243
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV
Sbjct: 244 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSV 303
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
+TC+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K
Sbjct: 304 MTCIVSKQLCMRPELDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDKT 363
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 313
L+ YG++ GLA LG V+++ ++P L +EP +L
Sbjct: 364 HLSSLYGSIAGLAELGGEVIKVFIIPRLKFISERIEPHLL 403
>gi|328768213|gb|EGF78260.1| hypothetical protein BATDEDRAFT_13395 [Batrachochytrium
dendrobatidis JAM81]
Length = 461
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 196/324 (60%), Gaps = 23/324 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFR-RAIGYRDLFYLDDKDVEFKDV 59
MRHSRR LT+ D++ AL +RNVEP+YG+ +G P F+ ++G + L+YL+D++ + D+
Sbjct: 47 MRHSRRQKLTSADINSALSVRNVEPLYGYINGAPSNFKMTSMGSQVLYYLEDQEYDLDDL 106
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---------------AAPSNGTN 104
I PLP PL+ + HWLA++G QP I +N I + G
Sbjct: 107 INRPLPPVPLEATYTAHWLAVDGAQPRIVQNPTPSGIYDYGQTTTETLQATTSTIRRGEK 166
Query: 105 NEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLV 164
+ + L VK +L++ELQ+Y++KITE+ S D + A+ S++ D G+ ++
Sbjct: 167 SLTSTSDTTQHPLLVKEVLTKELQMYYEKITEMLTSE-DLEIRSLAIESISKDPGVQGIM 225
Query: 165 PYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL- 223
PYF F++D V+R L + LL+ +MR +L N + EPYLHQL+PS++TC+VAKR+
Sbjct: 226 PYFVQFISDTVTRSLKDLELLWTIMRFTRGILSNVDLDPEPYLHQLIPSILTCIVAKRMT 285
Query: 224 ----GNRLAD-NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQH 278
G D +HW LR ++AKL A IC ++G Y TLQ R+TKTLL A+LDP + L
Sbjct: 286 RNSSGETAGDEDHWALRLYSAKLAAHICVQFGGAYPTLQPRVTKTLLRAMLDPLKPLATV 345
Query: 279 YGAVQGLAALGPNVVRLLLLPNLG 302
YGA+ LAALG VV L+LPN+
Sbjct: 346 YGALAALAALGKQVVCALVLPNVA 369
>gi|320580678|gb|EFW94900.1| transcription initiation factor TFIID subunit 6 [Ogataea
parapolymorpha DL-1]
Length = 499
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 201/347 (57%), Gaps = 38/347 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +R LT DVD A+K+ N+EP+YG+ PL F+ A +G + L+Y+DD DVEF+
Sbjct: 65 MRHGKRKILTVSDVDRAMKVLNLEPLYGYDVSRPLVFKEAMVGPGQTLYYVDDDDVEFEK 124
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAI------------------- 96
+I LP+ P TS HWLAIEGVQP IP+N A ++ +
Sbjct: 125 LINQSLPKVPRFTSFTAHWLAIEGVQPTIPQNPNPAEIKQLPPNQRGSVDNILSLNNDDV 184
Query: 97 ---AAPSNG----TNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ 149
PSNG N Q +++K VKH+LS+ELQLYFDK + ++ L
Sbjct: 185 SLSTNPSNGLTTVEQNSQGRKKDLDVKPLVKHMLSKELQLYFDKSVAALLDETNESLRAA 244
Query: 150 ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 209
AL SL D GLH LVPYF FVA+ ++ L N ++L ++ V+++LL N I ++PY+H
Sbjct: 245 ALESLEADPGLHQLVPYFIQFVAETITHNLKNPTILTTMLMVIYSLLSNKSIFLDPYIHA 304
Query: 210 LMPSVVTCLVAKRLGNRLAD----NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLL 265
+MP ++T L+AK++G R + +R+ A L+ I + YG Y TL+ R+T+TLL
Sbjct: 305 IMPCILTLLLAKKIGARSESEDDREQFRIRELAASLLQRIMREYGSSYTTLKPRITRTLL 364
Query: 266 NALLDP--KRALTQHYGAVQGLAALGPNVVRLLLLPNLGPY-LSLLE 309
A L K ++ +GA++G+ +LG V+R++++ NL + S+LE
Sbjct: 365 RAFLSSATKSSIGTQFGAMKGMKSLGKEVIRIIMVGNLKSWSTSILE 411
>gi|312381469|gb|EFR27213.1| hypothetical protein AND_06215 [Anopheles darlingi]
Length = 862
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/328 (39%), Positives = 197/328 (60%), Gaps = 28/328 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H++R+ L+ D+D +LK+RN+EP YGF + + FR A G R+L ++++K+++ D+
Sbjct: 250 MYHAKRSKLSIADIDHSLKVRNIEPQYGFVNPDFIPFRFASGGGRELHFVEEKEIDLSDL 309
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----VQAI------------------ 96
++ P+ PL+T++ HWLA++GVQP +PEN P VQA+
Sbjct: 310 VQGGPPKIPLETTLRAHWLAVDGVQPTVPENPPPLSKDVQALDSVNPAHKLDKTHLKDTT 369
Query: 97 AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
P+ ++ K+ V++K H LS E QLY+ +ITE V SD +AL SL+
Sbjct: 370 GKPAISKTHKLKNVETVQVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEALTSLSC 428
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+P V
Sbjct: 429 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPALYLEKYLHELIPCV 488
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
TC+V+++L R DNHW LRDF A+L+A ICK + N LQTR+T+ AL K
Sbjct: 489 STCIVSRQLCMRPEIDNHWALRDFAARLMAQICKNFNTSTNNLQTRVTRLFSAALTSDKT 548
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNL 301
L+ YGA++GL+ LG V+++ ++P L
Sbjct: 549 PLSSMYGALEGLSELGTEVIKVFIIPRL 576
>gi|425774639|gb|EKV12941.1| Transcription initiation factor TFIID complex 60 kDa subunit
[Penicillium digitatum Pd1]
gi|425776498|gb|EKV14715.1| Transcription initiation factor TFIID complex 60 kDa subunit
[Penicillium digitatum PHI26]
Length = 442
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 205/347 (59%), Gaps = 19/347 (5%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RT LTT D+ AL+ +VEP+YG+ S PL+F A +G + LFY++D++V+F+
Sbjct: 48 MRHCKRTVLTTQDIALALRNLDVEPLYGYDSTRPLKFGEASLGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP-- 112
+I APLP+ P + S HWLA+EGVQP IP+N A + + S G N N +
Sbjct: 108 LINAPLPKVPREVSFTAHWLAVEGVQPSIPQNPTAADSRNLELVSKGPNANSTLAAISGT 167
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKH+LSRELQLYF+K+ + + SL D GLH LVPYF F
Sbjct: 168 GDVAVKPLVKHVLSRELQLYFEKVCSAFLHETSEDYRTSGYSSLREDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD- 229
+A++V+ L N +L +M + L+QN + ++PY+ L+PS++TCL+ ++LG AD
Sbjct: 228 IAEKVTHSLKNVFVLTQVMHMAEALVQNQSLYVDPYIASLVPSILTCLIGRQLGGT-ADL 286
Query: 230 -NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
+ LRD A L++ I K+Y H + L+ RL ++ L LDP + HYGA+ GL ++
Sbjct: 287 VESFALRDMAASLLSLIAKKYSHSSHMLKPRLVRSCLKTFLDPSKPFGAHYGAIIGLQSV 346
Query: 289 -GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 334
G V+R+L++PNL Y LL + + +R A RV AL+
Sbjct: 347 GGSEVIRVLVIPNLHEYTKLLSDGL-----DDSARRPAAERVLNALV 388
>gi|255952885|ref|XP_002567195.1| Pc21g01240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588906|emb|CAP95021.1| Pc21g01240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 442
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 139/347 (40%), Positives = 205/347 (59%), Gaps = 19/347 (5%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RT LTT D+ AL+ +VEP+YG+ S PL+F A +G + LFY++D++V+F+
Sbjct: 48 MRHCKRTVLTTQDIALALRNLDVEPLYGYDSTRPLKFGEASLGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP-- 112
+I APLP+ P + S HWLA+EGVQP IP+N A + + S G N N +
Sbjct: 108 LINAPLPKVPREVSFTAHWLAVEGVQPSIPQNPTAADSRNLELVSKGPNANSTLAAISGT 167
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKH+LSRELQLYF+K+ + + SL D GLH LVPYF F
Sbjct: 168 GDVAVKPLVKHVLSRELQLYFEKVCSAFLHETSEDYRTSGYSSLREDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD- 229
+A++V+ L N +L +M + L+QN + ++PY+ L+PS++TCL+ ++LG AD
Sbjct: 228 IAEKVTHSLKNVFVLTQVMHMAEALVQNQSLYVDPYIASLVPSILTCLIGRQLGGT-ADL 286
Query: 230 -NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
+ LRD A L++ I K+Y H + L+ RL ++ L LDP + HYGAV GL ++
Sbjct: 287 VESFALRDMAASLLSLIAKKYSHSSHMLKPRLVRSCLKTFLDPSKPFGAHYGAVIGLQSV 346
Query: 289 -GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 334
G V+R+L++PNL Y LL + + +R A RV AL+
Sbjct: 347 GGSEVIRVLVIPNLPEYTKLLSDGL-----DDAARRPAAERVLNALV 388
>gi|149242252|ref|XP_001526435.1| hypothetical protein LELG_02993 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450558|gb|EDK44814.1| hypothetical protein LELG_02993 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 529
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 199/359 (55%), Gaps = 61/359 (16%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R TL T D+D ALK+ NVEP+YG+ + PL F+ + G + L+Y+DD +VEF+
Sbjct: 56 MRHSKRKTLMTTDIDYALKVLNVEPLYGYDNSQPLTFKETMVGAGGQTLYYIDDHEVEFE 115
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN--------APVQAIAAPSNGTNNE--- 106
+I LP+ P T+ HWLAIEGVQP++P+N P A S N+
Sbjct: 116 KLINQELPKIPRKTTFTAHWLAIEGVQPMVPQNPLPSEIKNLPPAVRGATSTFLGNDVLA 175
Query: 107 --------------------------------QKDGLPVEIKLPVKHILSRELQLYFDKI 134
++D E K VKH+LS+EL+LYFDK+
Sbjct: 176 LGVSNDGKDGGGSGGVGVSKKKAGTATSTSTTERD---FETKPLVKHVLSKELKLYFDKV 232
Query: 135 TELAVSR--SDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 192
E+ VS L AL SL +D GLH LVPYF FVA++++ L N +L ++ V+
Sbjct: 233 VEVLVSSDPEKESLKNAALTSLKSDPGLHQLVPYFIQFVAEQITNQLRNIEILSTMLEVI 292
Query: 193 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE----------LRDFTAKLV 242
L N I ++PY+H LMP ++T L+AKR+G + DN E +R+F A L+
Sbjct: 293 SALADNRTIFLDPYVHALMPCILTLLLAKRIGPVVKDNSPECEDTLRSQLAIREFAAILL 352
Query: 243 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
+ K YG Y+TL+ R+T+TLL ALLD + + HYGA+ GL LG V++L+L+ NL
Sbjct: 353 EHVIKTYGSSYSTLRPRVTRTLLRALLDSTKPVGTHYGALLGLKNLGSEVLKLVLVGNL 411
>gi|255732956|ref|XP_002551401.1| hypothetical protein CTRG_05699 [Candida tropicalis MYA-3404]
gi|240131142|gb|EER30703.1| hypothetical protein CTRG_05699 [Candida tropicalis MYA-3404]
Length = 507
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 207/384 (53%), Gaps = 66/384 (17%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R LTT D+ ALK+ N+EP+YG+ + PL ++ + G + L+Y+DD ++EF+
Sbjct: 56 MRHSKRRQLTTTDISYALKILNIEPLYGYDNSQPLNYKETMVGAGGQTLYYIDDNEIEFE 115
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN--------APVQAIAAPSN-------- 101
+I LP+ P + HWLA+EGVQP++P+N P A S
Sbjct: 116 KLINQELPKVPRQVNFTAHWLAVEGVQPMVPQNPLPSEIKNLPAVVRGATSTMLGNDILS 175
Query: 102 -GTNNEQKDG----------------------------LPVEIKLPVKHILSRELQLYFD 132
G NN+ D +EIK +KH+LS+EL+LYFD
Sbjct: 176 LGNNNKNDDSDSTSNGNKKSGSGNGSSTTGNTTTTTTEKDLEIKPLIKHVLSKELKLYFD 235
Query: 133 KITELAVSR--SDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMR 190
K+ E+ +S L AL SL D GLH LVPYF FVA++++ L N +L ++
Sbjct: 236 KVVEVLISTDPEKEHLKNAALTSLKNDPGLHQLVPYFIQFVAEQITNQLRNIEILSTMLE 295
Query: 191 VVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-----------NRLADNHWELRDFTA 239
V+ L N I ++PY+H LMP ++T L+AKR+G + + +R+F A
Sbjct: 296 VISALADNKTIFLDPYVHALMPCILTLLLAKRIGPIIKNPQSEESKEILKSQLAVREFAA 355
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
L+ I K YG Y+TL+ R+T+TLL ALLD + + HYGA+ GL +G V++L+L+
Sbjct: 356 ILLEHIIKVYGSSYSTLRPRVTRTLLRALLDSTKPIGTHYGALLGLKNMGSEVLKLVLIG 415
Query: 300 NLGPYLSLLEPEMLLEKQKNEVKR 323
NL + S ++E+ KNE ++
Sbjct: 416 NLKVWYS-----SVIEENKNEFEK 434
>gi|239612258|gb|EEQ89245.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces dermatitidis ER-3]
Length = 495
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 135/335 (40%), Positives = 199/335 (59%), Gaps = 26/335 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH++RT LTT DV AL++ +VEP+YG+ S PLRF A +G + LFY++D +V+F+
Sbjct: 48 MRHAKRTLLTTQDVSHALRVLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP-- 112
+I APLPR P + + HWLA+EGVQP IP+N A + I S G N N +
Sbjct: 108 LINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTGADSRNIELVSKGPNANANLAAMSGN 167
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKHILS+ELQLYF+K+ + + A SL D GLH LVPYF F
Sbjct: 168 DNVSVKPLVKHILSKELQLYFEKVCTAFLDELNEEYRLSAFSSLKEDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN 230
++++V+ L + +L +M + L+QN + ++PY+ L+P V+TCL+ ++LG+
Sbjct: 228 ISEKVTHSLKDLFVLTQVMHMTEALIQNTTLYVDPYVPSLIPPVLTCLIGRQLGSTTLST 287
Query: 231 ---------------HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 275
H+ LRD A L++ I ++Y H +TL+ RL +T L LDP + L
Sbjct: 288 GAGPTPTPTPTDPLEHFVLRDLAASLISMIARKYSHSSHTLRPRLARTFLKNFLDPGKPL 347
Query: 276 TQHYGAVQGLAALGP-NVVRLLLLPNLGPYLSLLE 309
HYGA+ GL ++G +VVR L++PNL Y +L+
Sbjct: 348 GTHYGAIIGLQSIGGVDVVRELIVPNLRTYEVVLK 382
>gi|327353210|gb|EGE82067.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces dermatitidis ATCC 18188]
Length = 495
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 135/335 (40%), Positives = 199/335 (59%), Gaps = 26/335 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH++RT LTT DV AL++ +VEP+YG+ S PLRF A +G + LFY++D +V+F+
Sbjct: 48 MRHAKRTLLTTQDVSHALRVLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP-- 112
+I APLPR P + + HWLA+EGVQP IP+N A + I S G N N +
Sbjct: 108 LINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTGADSRNIELVSKGPNANANLAAMSGN 167
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKHILS+ELQLYF+K+ + + A SL D GLH LVPYF F
Sbjct: 168 DNVSVKPLVKHILSKELQLYFEKVCTAFLDELNEEYRLSAFSSLKEDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN 230
++++V+ L + +L +M + L+QN + ++PY+ L+P V+TCL+ ++LG+
Sbjct: 228 ISEKVTHSLKDLFVLTQVMHMTEALIQNTTLYVDPYVPSLIPPVLTCLIGRQLGSTTLST 287
Query: 231 ---------------HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 275
H+ LRD A L++ I ++Y H +TL+ RL +T L LDP + L
Sbjct: 288 GAGPTPTPTPTDPLEHFVLRDLAASLISMIARKYSHSSHTLRPRLARTFLKNFLDPGKPL 347
Query: 276 TQHYGAVQGLAALGP-NVVRLLLLPNLGPYLSLLE 309
HYGA+ GL ++G +VVR L++PNL Y +L+
Sbjct: 348 GTHYGAIIGLQSIGGVDVVRELIVPNLRTYEVVLK 382
>gi|189237918|ref|XP_001811805.1| PREDICTED: similar to transcription initiation factor TFIID subunit
6 [Tribolium castaneum]
gi|270006675|gb|EFA03123.1| hypothetical protein TcasGA2_TC013033 [Tribolium castaneum]
Length = 599
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 194/326 (59%), Gaps = 27/326 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGF--ASGGPLRFRRAIGYRDLFYLDDKDVEFKD 58
+ H++RT L D+D ALK +N+EP YGF A G P RF G R+L ++++K+V D
Sbjct: 58 VHHAKRTKLMQSDIDAALKAKNLEPQYGFQSAEGLPFRFASG-GGRELHFIEEKEVVLND 116
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----VQAIAA--PSNGTNNEQKDGL 111
+++ +APL+ S+ HWL I+GVQP IPEN P +Q + + P N N++ G
Sbjct: 117 LLQNLNAKAPLEVSLRSHWLCIDGVQPTIPENPPPVAKNIQKLESVDPINKKPNKETSGK 176
Query: 112 P------------VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSG 159
P V+IK H LS E QLY+ +ITE V SD +AL SLA+D G
Sbjct: 177 PTTGKQKLRNVETVQIKQLATHELSVEQQLYYKEITEACVG-SDEARRAEALQSLASDPG 235
Query: 160 LHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTC 217
LH ++P F+ + V + NN +LL LMR+V LL N + +E YLH+L+PSV TC
Sbjct: 236 LHEMLPRMCTFIIEGVRVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELIPSVTTC 295
Query: 218 LVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA-L 275
+V+K+L R DNHW LRDF ++L++ ICK + N +QTR+T+ NAL + L
Sbjct: 296 IVSKQLCMRPELDNHWALRDFASRLMSQICKNFNTSTNNIQTRITRMFTNALQQGDKVPL 355
Query: 276 TQHYGAVQGLAALGPNVVRLLLLPNL 301
+ YGA++GL+ LG V+R+ +LP L
Sbjct: 356 SSLYGALEGLSELGAEVIRIFILPRL 381
>gi|354545571|emb|CCE42299.1| hypothetical protein CPAR2_808480 [Candida parapsilosis]
Length = 499
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 132/349 (37%), Positives = 198/349 (56%), Gaps = 48/349 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R L T D+D ALK+ NVEP+YG+ + P+ F+ + G + L+YLDD+++EF+
Sbjct: 56 MRHSKRKLLMTSDIDYALKILNVEPLYGYDNSQPINFKETMVGAGGQTLYYLDDQEIEFE 115
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN--------------------------- 90
+I LP+ P + HWLAIEGVQP++P+N
Sbjct: 116 KLINQELPKVPRRCNFTAHWLAIEGVQPMVPQNPLPSDIKNLPPAIRGATSSYLGNDILT 175
Query: 91 ------APVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSR--S 142
+ V +G+ N+ + K VKH+LS+EL+LYFDK+ E+ +S
Sbjct: 176 LGSNSASGVDGQDGTEDGSKNKNPTDKEFDTKPLVKHVLSKELKLYFDKVVEVLISTDPE 235
Query: 143 DSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQ 202
L AL SL +D GLH LVPYF FVA++++ L N +L ++ V+ L N I
Sbjct: 236 KESLKNAALTSLKSDPGLHQLVPYFIQFVAEQITNELRNIEILSTMLEVISALADNKTIF 295
Query: 203 IEPYLHQLMPSVVTCLVAKRLG---NRLADNHWE-------LRDFTAKLVAAICKRYGHV 252
++PY+H LMP ++T L+AKR+G N+ A+N+ E +R+F A L+ I K +G
Sbjct: 296 LDPYVHALMPCILTLLLAKRIGPIINKSAENYQEALRDQLTIREFAAILLEHIIKVHGSS 355
Query: 253 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
Y+TL+ R+T+TLL ALLD + + YGA+ GL G V++L+L+ NL
Sbjct: 356 YSTLRPRVTRTLLRALLDSTKPVGTQYGALLGLRNFGNEVLKLVLVGNL 404
>gi|150864390|ref|XP_001383179.2| hypothetical protein PICST_87852 [Scheffersomyces stipitis CBS
6054]
gi|149385646|gb|ABN65150.2| TATA-binding protein-associated factor [Scheffersomyces stipitis
CBS 6054]
Length = 494
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 196/348 (56%), Gaps = 47/348 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R L T D+ ALK+ N+EP+YG+ + PL F+ A+ G + L+Y+DD ++E +
Sbjct: 58 MRHSKRKLLMTSDISNALKVLNIEPLYGYDNSQPLVFKEALVGAGGQTLYYIDDNEIELE 117
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-APVQAIAAP----------------S 100
+I LP+ P T+ HWLAIEGVQP++ +N P + + P S
Sbjct: 118 KLINQELPKVPRQTTFTAHWLAIEGVQPMVAQNPLPAEIKSLPPIIRGATSSILGNDILS 177
Query: 101 NGTNNEQKDGLP--------------VEIKLPVKHILSRELQLYFDKITELAVSR--SDS 144
G N E KD E+K VKH+LS+EL+LYFDK+ E+ +S
Sbjct: 178 LGQNGENKDSAQGSAATKDKKATEKQSEVKPLVKHVLSKELKLYFDKVVEVLISTDPEKE 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIE 204
L AL SL D GLH LVPYF FVA++++ L N +L ++ V+ L N I ++
Sbjct: 238 NLKVAALNSLKNDPGLHQLVPYFIQFVAEQITNQLRNIDILSTMLEVISALADNKTIFLD 297
Query: 205 PYLHQLMPSVVTCLVAKRLGNRLAD-----------NHWELRDFTAKLVAAICKRYGHVY 253
PY+H LMP ++T L+AKR+G + + +R+F A L+ I K YG Y
Sbjct: 298 PYVHALMPCILTLLLAKRIGPVIRETSSKESQDTLKTQLAVREFAAFLLEHIIKVYGSSY 357
Query: 254 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
+TL+ R+T+TLL ALLD + + HYGA+ GL +G VV+L+L+ NL
Sbjct: 358 STLRPRVTRTLLRALLDSTKPVGTHYGALLGLKNMGTEVVKLVLIGNL 405
>gi|195591563|ref|XP_002085509.1| GD14815 [Drosophila simulans]
gi|194197518|gb|EDX11094.1| GD14815 [Drosophila simulans]
Length = 611
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 195/340 (57%), Gaps = 28/340 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H++R L+ D+D ALK+RNVEP YGF + + FR A G R+L + +DK+++ ++
Sbjct: 65 MNHAKRQKLSVRDIDMALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEI 124
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAI 96
+ + PLD ++ HW +EGVQP +PEN P A
Sbjct: 125 TSSNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAA 184
Query: 97 AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL +
Sbjct: 185 GKPTTGKVHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGS 243
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV
Sbjct: 244 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSV 303
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
+TC+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K
Sbjct: 304 MTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKT 363
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 313
L+ YG++ GL+ LG V+++ ++P L +EP +L
Sbjct: 364 HLSSLYGSIAGLSELGGEVIKVFIIPRLKFISERIEPHLL 403
>gi|195354204|ref|XP_002043589.1| GM19603 [Drosophila sechellia]
gi|194127757|gb|EDW49800.1| GM19603 [Drosophila sechellia]
Length = 611
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 195/340 (57%), Gaps = 28/340 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H++R L+ D+D ALK+RNVEP YGF + + FR A G R+L + +DK+++ ++
Sbjct: 65 MNHAKRQKLSVRDIDMALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEI 124
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAI 96
+ + PLD ++ HW +EGVQP +PEN P A
Sbjct: 125 TSSNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAA 184
Query: 97 AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL +
Sbjct: 185 GKPTTGKVHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGS 243
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV
Sbjct: 244 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSV 303
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
+TC+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K
Sbjct: 304 MTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKT 363
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 313
L+ YG++ GL+ LG V+++ ++P L +EP +L
Sbjct: 364 HLSSLYGSIAGLSELGGEVIKVFIIPRLKFISERIEPHLL 403
>gi|195496206|ref|XP_002095595.1| GE19612 [Drosophila yakuba]
gi|194181696|gb|EDW95307.1| GE19612 [Drosophila yakuba]
Length = 611
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 195/340 (57%), Gaps = 28/340 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H++R L+ D+D ALK+RNVEP YGF + + FR A G R+L + +DK+++ ++
Sbjct: 65 MHHAKRQKLSVRDIDMALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEI 124
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAI 96
+ + PLD ++ HW +EGVQP +PEN P A
Sbjct: 125 TSSNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQFLDSVNPVIKLDQGLNKDAA 184
Query: 97 AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL +
Sbjct: 185 GKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGS 243
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV
Sbjct: 244 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSV 303
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
+TC+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K
Sbjct: 304 MTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKT 363
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 313
L+ YG++ GL+ LG V+++ ++P L +EP +L
Sbjct: 364 HLSSLYGSIAGLSELGGEVIKVFIIPRLKFISERIEPHLL 403
>gi|261202442|ref|XP_002628435.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces dermatitidis SLH14081]
gi|239590532|gb|EEQ73113.1| transcription initiation factor TFIID complex 60 kDa subunit
[Ajellomyces dermatitidis SLH14081]
Length = 499
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 199/339 (58%), Gaps = 30/339 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH++RT LTT DV AL++ +VEP+YG+ S PLRF A +G + LFY++D +V+F+
Sbjct: 48 MRHAKRTLLTTQDVSHALRVLDVEPLYGYESTRPLRFGEATLGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN-NEQKDGLP-- 112
+I APLPR P + + HWLA+EGVQP IP+N A + I S G N N +
Sbjct: 108 LINAPLPRVPREITFTAHWLAVEGVQPTIPQNPTGADSRNIELVSKGPNANANLAAMSGN 167
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKHILS+ELQLYF+K+ + + A SL D GLH LVPYF F
Sbjct: 168 DNVSVKPLVKHILSKELQLYFEKVCTAFLDELNEEYRLSAFSSLKEDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN 230
++++V+ L + +L +M + L+QN + ++PY+ L+P V+TCL+ ++LG+
Sbjct: 228 ISEKVTHSLKDLFVLTQVMHMTEALIQNTTLYVDPYVPSLIPPVLTCLIGRQLGSTTLST 287
Query: 231 -------------------HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP 271
H+ LRD A L++ I ++Y H +TL+ RL +T L LDP
Sbjct: 288 GAGPTPTPTPTPTPTDPLEHFVLRDLAASLISMIARKYSHSSHTLRPRLARTFLKNFLDP 347
Query: 272 KRALTQHYGAVQGLAALGP-NVVRLLLLPNLGPYLSLLE 309
+ L HYGA+ GL ++G +VVR L++PNL Y +L+
Sbjct: 348 GKPLGTHYGAIIGLQSIGGVDVVRELIVPNLRTYEVVLK 386
>gi|194874194|ref|XP_001973357.1| GG16046 [Drosophila erecta]
gi|190655140|gb|EDV52383.1| GG16046 [Drosophila erecta]
Length = 611
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 195/340 (57%), Gaps = 28/340 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H++R L+ D+D ALK+RNVEP YGF + + FR A G R+L + +DK+++ ++
Sbjct: 65 MHHAKRQKLSVRDIDMALKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEI 124
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAI 96
+ + PLD ++ HW +EGVQP +PEN P A
Sbjct: 125 TSSNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQFLDSVNPVIKLDQGLNKDAA 184
Query: 97 AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL +
Sbjct: 185 GKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGS 243
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV
Sbjct: 244 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSV 303
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
+TC+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K
Sbjct: 304 MTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKT 363
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 313
L+ YG++ GL+ LG V+++ ++P L +EP +L
Sbjct: 364 HLSSLYGSIAGLSELGGEVIKVFIIPRLKFISERIEPHLL 403
>gi|195020556|ref|XP_001985217.1| GH16937 [Drosophila grimshawi]
gi|193898699|gb|EDV97565.1| GH16937 [Drosophila grimshawi]
Length = 613
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/349 (37%), Positives = 196/349 (56%), Gaps = 28/349 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H+RR L+ D+D +LK+RN+EP YGF + + FR A G R+L + +DK+++ ++
Sbjct: 65 MHHARRQKLSVRDIDMSLKVRNIEPQYGFVTKDFIPFRFASGGGRELHFTEDKEIDLSEI 124
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAI 96
+ PLD ++ HW +EG+QP +PEN P A
Sbjct: 125 TANSSAKIPLDLTLRSHWFVVEGIQPTVPENPPPLSKDSQFLDSVNPVIKMDQGLNKDAA 184
Query: 97 AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL +
Sbjct: 185 GKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRAEALQSLGS 243
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV
Sbjct: 244 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSV 303
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
+TC+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K
Sbjct: 304 MTCIVSKQLCMRPELDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDKT 363
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVK 322
L+ YG+V GL+ LG V+++ ++P L +EP +L N K
Sbjct: 364 HLSSLYGSVAGLSELGGEVIKVFIIPRLKFISERIEPHLLGTSMSNTDK 412
>gi|437333|gb|AAA16536.1| TAFII60 [Drosophila melanogaster]
Length = 592
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/341 (38%), Positives = 194/341 (56%), Gaps = 30/341 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGG--PLRFRRAIGYRDLFYLDDKDVEFKD 58
M H++R L+ D+D +LK+RNVEP YGF + PLRF G R+L + +DK+++ +
Sbjct: 51 MNHAKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIPLRFASG-GGRELHFTEDKEIDLGE 109
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQA 95
+ + PLD ++ HW +EGVQP +PEN P A
Sbjct: 110 ITSTNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDA 169
Query: 96 IAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLA 155
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL
Sbjct: 170 AGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLG 228
Query: 156 TDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPS 213
+D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PS
Sbjct: 229 SDPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPS 288
Query: 214 VVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPK 272
V+TC+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K
Sbjct: 289 VMTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDK 348
Query: 273 RALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 313
L+ YG++ GL+ LG V+++ ++P L +EP +L
Sbjct: 349 THLSSLYGSIAGLSELGGEVIKVFIIPRLKFISERIEPHLL 389
>gi|195173306|ref|XP_002027433.1| GL20945 [Drosophila persimilis]
gi|194113285|gb|EDW35328.1| GL20945 [Drosophila persimilis]
Length = 555
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 193/338 (57%), Gaps = 28/338 (8%)
Query: 3 HSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIE 61
H++R + D+D +LK+RNVEP YGF S + FR A G R+L + +DK+++ ++
Sbjct: 67 HAKRQKILISDIDMSLKVRNVEPQYGFVSKDNIPFRFATGGGRELHFTEDKEIDLSEITA 126
Query: 62 APLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAIAA 98
+ PLDT++ HW +EG+QP +PEN P A
Sbjct: 127 NNAVKIPLDTTLRSHWFVVEGIQPTVPENPPPLSKDSQFVDSVNPVIKLDQGLNKDAAGK 186
Query: 99 PSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 158
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL +D
Sbjct: 187 PTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDP 245
Query: 159 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 216
GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+T
Sbjct: 246 GLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMT 305
Query: 217 CLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 275
C+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L
Sbjct: 306 CIVSKQLCMRPELDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDKTHL 365
Query: 276 TQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 313
+ YG++ GL+ LG V+++ ++P L +EP +L
Sbjct: 366 SSLYGSIAGLSELGGEVIKVFIIPRLAFISERIEPHLL 403
>gi|198463837|ref|XP_001352957.2| GA16761 [Drosophila pseudoobscura pseudoobscura]
gi|198151433|gb|EAL30458.2| GA16761 [Drosophila pseudoobscura pseudoobscura]
Length = 620
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 193/338 (57%), Gaps = 28/338 (8%)
Query: 3 HSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIE 61
H++R + D+D +LK+RNVEP YGF S + FR A G R+L + +DK+++ ++
Sbjct: 67 HAKRQKILISDIDMSLKVRNVEPQYGFVSKDNIPFRFATGGGRELHFTEDKEIDLSEITA 126
Query: 62 APLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAIAA 98
+ PLDT++ HW +EG+QP +PEN P A
Sbjct: 127 NNAVKIPLDTTLRSHWFVVEGIQPTVPENPPPLSKDSQFVDSVNPVIKLDQGLNKDAAGK 186
Query: 99 PSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 158
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL +D
Sbjct: 187 PTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGSDP 245
Query: 159 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 216
GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV+T
Sbjct: 246 GLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSVMT 305
Query: 217 CLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 275
C+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K L
Sbjct: 306 CIVSKQLCMRPELDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDKTHL 365
Query: 276 TQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 313
+ YG++ GL+ LG V+++ ++P L +EP +L
Sbjct: 366 SSLYGSIAGLSELGGEVIKVFIIPRLAFISERIEPHLL 403
>gi|405971664|gb|EKC36489.1| Transcription initiation factor TFIID subunit 6 [Crassostrea gigas]
Length = 637
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 194/337 (57%), Gaps = 44/337 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H +R L+T D+D AL+ +N+EP+YGF +G + FR A G R+L ++++K+ + +++
Sbjct: 59 MHHGKRHRLSTADIDHALRAQNIEPLYGFQTGDSIPFRFASGGGRELHFVEEKEFDLQEI 118
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
+ + LP+ P+D ++ HWL IEGVQP IPEN P P++ + +QK+ L +K +
Sbjct: 119 VNSTLPKIPIDIALKAHWLCIEGVQPSIPENPP------PAS-KDQQQKEILDTTVKTVI 171
Query: 120 K--------------------------------HILSRELQLYFDKITELAVSRSDSVLF 147
+ H LS E QLY+ +ITE V D
Sbjct: 172 EKQPKVAPIPEPHKIKHKHKGITDLAKVKDLSNHELSVEQQLYYKEITEACVG-PDEARR 230
Query: 148 KQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEP 205
+AL SLA+D GLH ++P F+ F+++ V + NN +LL LMR+V +++ N + +E
Sbjct: 231 SEALQSLASDPGLHQMLPRFSTFISEGVKINVVQNNLALLIYLMRMVKSIMDNQTLYLEK 290
Query: 206 YLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTL 264
YLH+ +P+V TC+V+K+L R DNHW LRDF A+L+ +CK + N +Q R+TKT
Sbjct: 291 YLHEFIPAVCTCIVSKQLCMRPEVDNHWALRDFAARLMGQMCKNFSTSTNNIQARITKTF 350
Query: 265 LNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
A+ K AL YGA+ GL +G V++ LLP++
Sbjct: 351 TQAIQSEKAALATQYGAIAGLGEMGSEVIKSFLLPHV 387
>gi|440632593|gb|ELR02512.1| hypothetical protein GMDG_01038 [Geomyces destructans 20631-21]
Length = 453
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 192/327 (58%), Gaps = 20/327 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
M+ +RT L T D+ +ALK+ +VEP+YG+ S PLRF A +G + LFY++D++V+F+
Sbjct: 52 MQQGKRTVLGTQDISQALKVLDVEPLYGYESTRPLRFGEASLGPGQPLFYIEDEEVDFEK 111
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIA-----APSNGTNNEQKDGLP- 112
+I APLP+ P D S HWLA+EGVQP IP+N P A A P N L
Sbjct: 112 LINAPLPKVPRDISFTAHWLAVEGVQPSIPQN-PTTAEARTQELVPKGANANPTLTALTG 170
Query: 113 ---VEIKLPVKHILSRELQLYFDKITE--LAVSRSDSV--LFKQALVSLATDSGLHPLVP 165
V K VKHILS+EL LYF+KI L D V L AL S+ D L LVP
Sbjct: 171 NDNVGFKPQVKHILSKELMLYFEKIRTAILDTDPDDDVVRLRVAALASVENDESLQQLVP 230
Query: 166 YFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN 225
YF F+A++V+ N +L +M + L +N + I+PY L SV+TCLV + L N
Sbjct: 231 YFVQFIAEKVTHNTKNIFVLQTMMELASALTRNERLFIDPYTTTLCSSVLTCLVGRGLTN 290
Query: 226 RL---ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAV 282
+H++LR+F+A L+ I K+Y L+ RL +T+L L+PK+ L QHYGA+
Sbjct: 291 ATPVEVKDHYKLREFSASLLGHIAKKYAKSSQQLKPRLARTVLKYFLNPKKPLDQHYGAI 350
Query: 283 QGLAAL-GPNVVRLLLLPNLGPYLSLL 308
GL A+ GP VR+L++PNL Y S+L
Sbjct: 351 SGLVAVGGPESVRMLIIPNLKAYNSVL 377
>gi|154308898|ref|XP_001553784.1| hypothetical protein BC1G_07977 [Botryotinia fuckeliana B05.10]
gi|347838599|emb|CCD53171.1| similar to transcription initiation factor TFIID complex subunit
[Botryotinia fuckeliana]
Length = 472
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 133/323 (41%), Positives = 195/323 (60%), Gaps = 20/323 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
M +RT L T D+ +ALK+ +VEP+YG+ S PLRF A +G + LFY++D++V+F+
Sbjct: 52 MHQGKRTVLGTQDISQALKVLDVEPLYGYESTRPLRFGEASLGPGQPLFYIEDEEVDFEK 111
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIA-----APSNGTNNEQKDGLP- 112
+I APLP+ P D S HWLA+EGVQP IP+N P A A P N L
Sbjct: 112 LINAPLPKVPRDMSFTAHWLAVEGVQPSIPQN-PTTAEARANDLVPKGPGANPNLGALAG 170
Query: 113 ---VEIKLPVKHILSRELQLYFDKITELAVSRSDS----VLFKQALVSLATDSGLHPLVP 165
V +K VKHI+S+EL L+FDKI E + D L + AL S+ TD+GL LVP
Sbjct: 171 NDNVTVKPLVKHIVSKELILFFDKIREAILDDDDDPEVVTLREAALKSVETDTGLQQLVP 230
Query: 166 YFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN 225
YF +F+A++V+ L+N +L ++++ L+ N + +EPY+ L P ++TCLV ++LG
Sbjct: 231 YFVHFIAEKVTHSLSNLFVLQTMLKLAHVLVSNKKLFVEPYISSLCPPILTCLVGRKLGT 290
Query: 226 RLAD---NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAV 282
+ ++LRD A L+ I K+Y L+ RL ++ L LDP R+ ++YGA+
Sbjct: 291 GAPEELKEKYQLRDTAASLIGIISKKYTESNAQLRARLARSCLKFFLDPTRSPGEYYGAI 350
Query: 283 QGLAAL-GPNVVRLLLLPNLGPY 304
GL A+ GP+ VR L+LPNLG +
Sbjct: 351 SGLLAIGGPDGVRALILPNLGAF 373
>gi|115910612|ref|XP_781123.2| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Strongylocentrotus purpuratus]
Length = 657
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 130/352 (36%), Positives = 208/352 (59%), Gaps = 39/352 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M+H++R L+T D D L+++N+E +YGF++ + FR A G R+L ++++K+++ D+
Sbjct: 56 MKHAKRVKLSTADFDHTLRVQNIESLYGFSTEEHIPFRFASGGGRELHFVEEKELDLSDI 115
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------VQAIAAPSNGTNNEQK 108
I + +P+ PLD S+ HWL+IEG QP IPEN P A+ E+K
Sbjct: 116 INSSMPKIPLDVSLKAHWLSIEGTQPAIPENPPPVDTHTQKVESQDALRTKKPTAKAEKK 175
Query: 109 DGL--------------------PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFK 148
G PV++K + H LS E QLY+ +ITE V S++
Sbjct: 176 SGKGDMGKTAATLLAKAKGLTSDPVKLKGVLVHELSVEQQLYYKEITEACVGSSETKR-A 234
Query: 149 QALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPY 206
+AL SLA+D GL+ +VP F+ F+A+ V + NN ++L LMR+V L+ N + +E Y
Sbjct: 235 EALHSLASDPGLYQVVPRFSMFIAEGVKVNVVQNNLAILIYLMRMVKALMDNVTLYLEKY 294
Query: 207 LHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLL 265
LH+L+P+V+TC+V+++L R ADNHW LRDF A+L+A++C+++ N +Q R++KT
Sbjct: 295 LHELIPAVMTCVVSRQLSLRPDADNHWALRDFAARLMASMCRKFSTTTNNMQARISKTFD 354
Query: 266 NALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN---LGPYLSLLEPEMLL 314
+L K L YGA+ GLA LGP V++ L++P LG L ++ +++
Sbjct: 355 ESLSKDKAPLATIYGALVGLAELGPEVMKTLVIPKVRMLGERLRIMTESLII 406
>gi|24666846|ref|NP_524161.2| TBP-associated factor 6, isoform A [Drosophila melanogaster]
gi|27923999|sp|P49847.2|TAF6_DROME RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=TAFII-60; AltName: Full=TAFII-62; AltName:
Full=Transcription initiation factor TFIID 62 kDa
subunit; Short=p62
gi|15291715|gb|AAK93126.1| LD24529p [Drosophila melanogaster]
gi|23093125|gb|AAF49139.2| TBP-associated factor 6, isoform A [Drosophila melanogaster]
gi|220943388|gb|ACL84237.1| Taf6-PA [synthetic construct]
Length = 606
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 194/340 (57%), Gaps = 28/340 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H++R L+ D+D +LK+RNVEP YGF + + FR A G R+L + +DK+++ ++
Sbjct: 65 MNHAKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEI 124
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAI 96
+ PLD ++ HW +EGVQP +PEN P A
Sbjct: 125 TSTNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAA 184
Query: 97 AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL +
Sbjct: 185 GKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGS 243
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV
Sbjct: 244 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSV 303
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
+TC+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K
Sbjct: 304 MTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKT 363
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 313
L+ YG++ GL+ LG V+++ ++P L +EP +L
Sbjct: 364 HLSSLYGSIAGLSELGGEVIKVFIIPRLKFISERIEPHLL 403
>gi|630879|pir||S42220 transcription initiation factor IID chain p62 - fruit fly
(Drosophila melanogaster)
gi|458682|gb|AAC46480.1| transcription initiation factor TFIID 62 kDa subunit [Drosophila
melanogaster]
Length = 592
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 194/340 (57%), Gaps = 28/340 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H++R L+ D+D +LK+RNVEP YGF + + FR A G R+L + +DK+++ ++
Sbjct: 51 MNHAKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEI 110
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAI 96
+ PLD ++ HW +EGVQP +PEN P A
Sbjct: 111 TSTNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAA 170
Query: 97 AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL +
Sbjct: 171 GKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGS 229
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV
Sbjct: 230 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSV 289
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
+TC+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K
Sbjct: 290 MTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKT 349
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 313
L+ YG++ GL+ LG V+++ ++P L +EP +L
Sbjct: 350 HLSSLYGSIAGLSELGGEVIKVFIIPRLKFISERIEPHLL 389
>gi|195377535|ref|XP_002047544.1| GJ13501 [Drosophila virilis]
gi|194154702|gb|EDW69886.1| GJ13501 [Drosophila virilis]
Length = 616
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 208/379 (54%), Gaps = 30/379 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H++R L+ D+D +LK+RN+EP YGF + + FR A G R+L + +DK+++ ++
Sbjct: 65 MHHAKRQKLSVKDIDMSLKVRNIEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLSEI 124
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAI 96
+ PLD ++ HW +EG+QP +PEN P A
Sbjct: 125 TANSSVKIPLDLTLRSHWFVVEGIQPTVPENPPPLSKDSQFLDSVNPVIKLDQGLNKDAA 184
Query: 97 AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL +
Sbjct: 185 GKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRAEALQSLGS 243
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV
Sbjct: 244 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSV 303
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
+TC+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K
Sbjct: 304 MTCIVSKQLCMRPELDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDKT 363
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGAL 333
L+ YG++ GL+ LG V+++ ++P L +EP +L N K A A+
Sbjct: 364 HLSSLYGSIAGLSELGGEVIKVFIIPRLKFISERIEPHLLGTSMSNTDK--TAAGHIRAM 421
Query: 334 LQAAGQCIYDRLKIFPPLS 352
LQ I +++ P ++
Sbjct: 422 LQKCCPPILKQMRAAPDIA 440
>gi|442633400|ref|NP_001262056.1| TBP-associated factor 6, isoform B [Drosophila melanogaster]
gi|440216014|gb|AGB94749.1| TBP-associated factor 6, isoform B [Drosophila melanogaster]
Length = 605
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 194/340 (57%), Gaps = 28/340 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H++R L+ D+D +LK+RNVEP YGF + + FR A G R+L + +DK+++ ++
Sbjct: 65 MNHAKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEI 124
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAI 96
+ PLD ++ HW +EGVQP +PEN P A
Sbjct: 125 TSTNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAA 184
Query: 97 AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL +
Sbjct: 185 GKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGS 243
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV
Sbjct: 244 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSV 303
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
+TC+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K
Sbjct: 304 MTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKT 363
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 313
L+ YG++ GL+ LG V+++ ++P L +EP +L
Sbjct: 364 HLSSLYGSIAGLSELGGEVIKVFIIPRLKFISERIEPHLL 403
>gi|391340118|ref|XP_003744392.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Metaseiulus occidentalis]
Length = 482
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 191/316 (60%), Gaps = 18/316 (5%)
Query: 3 HSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIE 61
H +R L D+D AL+++NVEP+YGF+ + FR A G R++++ +DK+++ ++
Sbjct: 57 HGKRRKLLASDLDSALRMKNVEPLYGFSDPHFIPFRFASGGGREVYFREDKEIDLCQLMS 116
Query: 62 APLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGT-------NNEQKDGLP-- 112
APLP+ PLD SI HWLAIEG+QP +PEN P++ G+ ++ G P
Sbjct: 117 APLPKLPLDISIKAHWLAIEGIQPTVPENPPLEPRNQQKQGSLDPFSIMQEARQSGKPPR 176
Query: 113 ----VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFT 168
V +K H LS E QLY+ +I+E V DS +ALVSL++D+GLH ++P
Sbjct: 177 HFETVCVKQLATHELSVEQQLYYKEISEACVGSDDS-RRAEALVSLSSDTGLHQMLPRLC 235
Query: 169 YFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 226
F+++ V + NN + L L+R++ LL N ++ +E YLH+L+P+V TC+V+K+L R
Sbjct: 236 TFISEGVKLNVVQNNLAFLIYLIRMIKALLDNQNLYLEKYLHELIPAVATCIVSKQLCMR 295
Query: 227 -LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGL 285
DNHW LRDF ++L++ IC+ Y N +QTR+T+ L L + LT YGAV +
Sbjct: 296 PEVDNHWALRDFASRLMSQICRNYNTSTNGIQTRITRILSKVLSNDHMPLTAMYGAVSAV 355
Query: 286 AALGPNVVRLLLLPNL 301
LG VVR LL+P +
Sbjct: 356 GELGSEVVRSLLIPRV 371
>gi|50311083|ref|XP_455565.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644701|emb|CAG98273.1| KLLA0F10659p [Kluyveromyces lactis]
Length = 516
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 203/358 (56%), Gaps = 62/358 (17%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGG----PLRFRRAIGY--RDLFYLDDKDVE 55
RHS+R+TLTT DV +AL++ NVEP+YGF G P++F + G + L+YLDD++++
Sbjct: 60 RHSKRSTLTTSDVAKALRVLNVEPLYGFEEGSAKNEPVKFNKLEGANGQTLYYLDDEEID 119
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN----------APVQ--AIAAPSNGT 103
F+ +I PLP P + HWLA+EG+QP IP+N P+Q AI +P N T
Sbjct: 120 FEKLINTPLPEVPRLPTFTAHWLAVEGIQPAIPQNPNINELRLSQVPLQRGAIVSPLNET 179
Query: 104 N---------NEQKD-------------GLPVEIKLPVKHILSRELQLYFDKITELAVSR 141
+ NE++ G E K VKH+LS+ELQ+YF+K+ S+
Sbjct: 180 SVQTSLQTNVNEERQATANGPISTQVKPGAASEAKPLVKHVLSKELQIYFEKVASALTSK 239
Query: 142 SDSV----LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQ 197
+ + + AL SL +D+GLH LVPYF F+A++++ L + LL ++ ++++LL
Sbjct: 240 EEDINSQRMRAAALTSLKSDTGLHQLVPYFIQFIAEQITHHLEDLELLTTMLEMIYSLLS 299
Query: 198 NPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE------------------LRDFTA 239
N + ++PY+H LMPS++T L+AKRLG + N + +RDF +
Sbjct: 300 NQSVFLDPYIHSLMPSILTLLLAKRLGGNGSKNSSDDKIVDQQNKKEFLEKTNAVRDFAS 359
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
L+ + K++ V+ +L+ R+T+TLL LD R+ +YG V+G++ LG +R L
Sbjct: 360 SLLDHVLKKFPKVHKSLKPRVTRTLLKTFLDINRSFGTYYGCVRGVSVLGNETIRFFL 417
>gi|291411249|ref|XP_002721901.1| PREDICTED: TBP-associated factor 6 isoform 2 [Oryctolagus
cuniculus]
Length = 668
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 129/323 (39%), Positives = 192/323 (59%), Gaps = 40/323 (12%)
Query: 18 LKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCH 76
+ L+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD + H
Sbjct: 75 MSLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAH 134
Query: 77 WLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGTNNE 106
WL+IEG QP IPEN P +A AAP++G E
Sbjct: 135 WLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSTKPGQEEDGPLKSKGQGAAPADGKGKE 194
Query: 107 QK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLH 161
+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+
Sbjct: 195 KKAPPLLEGTPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLY 253
Query: 162 PLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLV 219
++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V
Sbjct: 254 QMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIV 313
Query: 220 AKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQH 278
+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T
Sbjct: 314 SRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTR 373
Query: 279 YGAVQGLAALGPNVVRLLLLPNL 301
YG++ GLA LG +V++ L+LP L
Sbjct: 374 YGSIAGLAELGHDVIKTLILPRL 396
>gi|68479895|ref|XP_716115.1| hypothetical protein CaO19.7454 [Candida albicans SC5314]
gi|46437770|gb|EAK97111.1| hypothetical protein CaO19.7454 [Candida albicans SC5314]
gi|238881059|gb|EEQ44697.1| hypothetical protein CAWG_02975 [Candida albicans WO-1]
Length = 519
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 211/390 (54%), Gaps = 71/390 (18%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R LTT DV ALK+ N+EP+YG+ + PL ++ + G + L+Y+D+ ++EF+
Sbjct: 56 MRHSKRRQLTTSDVSNALKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHEIEFE 115
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGT----------- 103
+I LP+ P + HWLAIEGVQP++P+N + ++++ A G
Sbjct: 116 KLINQQLPKVPRQVNFTAHWLAIEGVQPMVPQNPLPSEIKSLPAAVRGATTSMLGNDILS 175
Query: 104 ------NNEQKDGLP----------------------------VEIKLPVKHILSRELQL 129
N E D +EIK +KH+LS+EL+L
Sbjct: 176 LGSKNENGESNDSTKHESELLSNGGSSSHTNNSNSNKKSTEKDMEIKPLIKHVLSKELKL 235
Query: 130 YFDKITELAVSR--SDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFA 187
YFDK+ ++ +S L AL SL +D GLH LVPYF F+A++++ L N +L
Sbjct: 236 YFDKVVDVLISTDPEKEHLKNAALTSLKSDPGLHQLVPYFIQFIAEQITNQLRNIEILST 295
Query: 188 LMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-----NRLADNHWE--------L 234
++ V+ L+ N I ++PY+H LMP ++T L+AKR+G + W+ +
Sbjct: 296 MLEVISALVDNKTIFLDPYVHALMPCILTLLLAKRIGPVIKLTQENKEEWQDALKSQLAI 355
Query: 235 RDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVR 294
R+F A L+ I K YG Y+TL+ R+T+TLL ALLD + + YGA+ GL +G V++
Sbjct: 356 REFAAILLQHIIKVYGSSYSTLRPRITRTLLRALLDSTKPVGTQYGALLGLKNMGNEVLK 415
Query: 295 LLLLPNLGPYLSLLEPEMLLEKQKNEVKRH 324
L+LL NL + S ++EK +N+ +R
Sbjct: 416 LVLLGNLKVWYS-----AIIEKNENDYERQ 440
>gi|291411247|ref|XP_002721900.1| PREDICTED: TBP-associated factor 6 isoform 1 [Oryctolagus
cuniculus]
Length = 678
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/323 (39%), Positives = 192/323 (59%), Gaps = 40/323 (12%)
Query: 18 LKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCH 76
+ L+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD + H
Sbjct: 75 MSLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAH 134
Query: 77 WLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGTNNE 106
WL+IEG QP IPEN P +A AAP++G E
Sbjct: 135 WLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSTKPGQEEDGPLKSKGQGAAPADGKGKE 194
Query: 107 QK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLH 161
+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+
Sbjct: 195 KKAPPLLEGTPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLY 253
Query: 162 PLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLV 219
++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V
Sbjct: 254 QMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIV 313
Query: 220 AKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQH 278
+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T
Sbjct: 314 SRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTR 373
Query: 279 YGAVQGLAALGPNVVRLLLLPNL 301
YG++ GLA LG +V++ L+LP L
Sbjct: 374 YGSIAGLAELGHDVIKTLILPRL 396
>gi|441649872|ref|XP_004093341.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 6, partial [Nomascus leucogenys]
Length = 607
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 193/326 (59%), Gaps = 40/326 (12%)
Query: 15 DEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 73
D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD +
Sbjct: 1 DYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCL 60
Query: 74 VCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGT 103
HWL+IEG QP IPEN P +A A ++G
Sbjct: 61 KAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGTLKGKGQGATTADGK 120
Query: 104 NNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 158
E+K +G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD
Sbjct: 121 GKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDP 179
Query: 159 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 216
GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+T
Sbjct: 180 GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT 239
Query: 217 CLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 275
C+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K
Sbjct: 240 CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW 299
Query: 276 TQHYGAVQGLAALGPNVVRLLLLPNL 301
T YG++ GLA LG +V++ L+LP L
Sbjct: 300 TTRYGSIAGLAELGHDVIKTLILPRL 325
>gi|740569|prf||2005369A transcription factor TFIID
Length = 592
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 194/340 (57%), Gaps = 28/340 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H++R L+ D+D +LK+RNVEP YGF + + FR A G R+L + +DK+++ ++
Sbjct: 51 MNHAKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEI 110
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAI 96
+ PLD ++ HW +EGVQP +PEN P A
Sbjct: 111 TSTNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAA 170
Query: 97 AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL +
Sbjct: 171 GKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGS 229
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV
Sbjct: 230 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSV 289
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
+TC+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K
Sbjct: 290 MTCIVSKQLCMRPELDNHWALRDFASRLMAQICKNFNTLTNNLQTRVTRIFSKALQNDKT 349
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 313
L+ YG++ GL+ LG V+++ ++P + +EP +L
Sbjct: 350 HLSSLYGSIAGLSELGGEVIKVFIIPRIKFISERIEPHLL 389
>gi|357605897|gb|EHJ64821.1| transcription initiation factor TFIID subunit 6 [Danaus plexippus]
Length = 579
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/347 (38%), Positives = 191/347 (55%), Gaps = 47/347 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M HS+R L+ D+D ALK++N E YGF L FR A G R+L ++++K+++ ++
Sbjct: 1 MHHSKRQKLSITDIDNALKIKNTEAQYGFVQPDSLPFRFASGGGRELHFIEEKEIDLSEI 60
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENA--------------PVQAIAAPSN---- 101
+ AP P+ PLD S+ HWL+++GVQP +PEN PV ++ P+N
Sbjct: 61 LSAPPPKIPLDVSLRAHWLSVDGVQPTVPENPPPLSKEAQKLESVDPVSKLSKPANKDSA 120
Query: 102 -----GTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
G K V +K H LS E QLY+ +ITE V SD +AL SLA
Sbjct: 121 GKPVSGKAARLKASESVHVKQLATHELSVEQQLYYKEITEAGVG-SDEGRRAEALQSLAC 179
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+++ V + NN +LL LMR+V +L N + +E YLH+L+PSV
Sbjct: 180 DPGLHEMLPRMCTFISEGVKVNVVQNNLALLIYLMRMVKAMLDNQSLYLEKYLHELIPSV 239
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP-- 271
TC+V+++L R DNHW LRDF A+L+A +CK + N LQTR+T+ AL P
Sbjct: 240 STCIVSRQLCTRPEVDNHWALRDFAARLMAQLCKTFNTSTNNLQTRVTRLFAKALQCPSQ 299
Query: 272 -----------------KRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
K L YGAVQGLA LGP VV++ +LP +
Sbjct: 300 TNNESGPSMVASMKESEKTPLASLYGAVQGLAELGPEVVKVFILPRV 346
>gi|448104070|ref|XP_004200193.1| Piso0_002770 [Millerozyma farinosa CBS 7064]
gi|359381615|emb|CCE82074.1| Piso0_002770 [Millerozyma farinosa CBS 7064]
Length = 495
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/349 (37%), Positives = 199/349 (57%), Gaps = 48/349 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R L T D++ AL++ N+EP+YG+ + L F+ + G + L+Y+DDK+++ +
Sbjct: 58 MRHSKRRLLMTSDINHALEMLNIEPLYGYDNTQQLNFKETLVGAGGQTLYYIDDKEMDLE 117
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAI------AAPSNGTNNEQK 108
+I PLP P T+ HWLA+EGVQP+IP+N + +++I A S N+
Sbjct: 118 KLINQPLPTVPRQTTFTAHWLAVEGVQPMIPQNPLPSEIKSIPPFARGATSSTLGNDITS 177
Query: 109 DGL-----------------------PVEIKLPVKHILSRELQLYFDKITELAVSR--SD 143
GL E+K VKH+LS+EL+LYFDK+ E+ ++
Sbjct: 178 SGLSSDVTMKDRDDQSRNKNTGLSQNASEVKPLVKHVLSKELKLYFDKVVEVLITTDPEK 237
Query: 144 SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQI 203
L AL SL D GLH LVPYF FVA++++ L N +L ++ V+ L N + +
Sbjct: 238 ENLKYAALTSLKNDPGLHQLVPYFIQFVAEQITNQLRNIEILTTMLEVISALADNKTLFL 297
Query: 204 EPYLHQLMPSVVTCLVAKRLGNRLADNH-----------WELRDFTAKLVAAICKRYGHV 252
+PY+H LMP ++T L+AKR+G DN+ +R+F A L+ I K YG
Sbjct: 298 DPYVHTLMPCILTLLLAKRIGPASKDNNSSEAEDSLKKQLAVREFAAILLDHIIKVYGSS 357
Query: 253 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
Y+TL+ R+T+TLL ALLD + + HYG + GL +GP V++L+++ NL
Sbjct: 358 YSTLKARVTRTLLRALLDYSKPVGTHYGTLLGLKNMGPEVIKLVVIGNL 406
>gi|321468811|gb|EFX79794.1| hypothetical protein DAPPUDRAFT_244529 [Daphnia pulex]
Length = 476
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/326 (39%), Positives = 190/326 (58%), Gaps = 26/326 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H +R L+T DVD ALK++N+EP+YGF++ + FR A G R+L +L+DK+++ D+
Sbjct: 56 MHHGKRKKLSTMDVDHALKIKNIEPLYGFSNPDHIPFRFASGGGRELHFLEDKELDIADI 115
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN--------------APVQAIAAPSNGTNN 105
I LP+ PLD S+ HWL+I+G+QP +PEN PV +A + T
Sbjct: 116 IGGSLPKLPLDVSLRAHWLSIDGIQPAVPENPPSLSKDQQRLESSDPVSKLAKIGDKTKK 175
Query: 106 -------EQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDS 158
+ V++K H LS E QLY+ +ITE V SD +A SLA+D
Sbjct: 176 ASTLTAINKPKTETVQVKQLTAHELSVEQQLYYKEITEACVG-SDEARRAEAFQSLASDP 234
Query: 159 GLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 216
GLH ++P F+A+ V + NN + L LMR+V LL N + +E YLH+L+P+V +
Sbjct: 235 GLHQMLPRLCTFIAEGVRVNVVQNNLAPLIYLMRMVKALLSNQTLYLEKYLHELVPAVTS 294
Query: 217 CLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 275
C+V+K+L R DNHW LRDF+++L+A ICK Y N QTR+T+ AL + K L
Sbjct: 295 CMVSKQLCLRPEVDNHWALRDFSSRLIAQICKNYHTTTNNCQTRVTRLFCRALANDKMPL 354
Query: 276 TQHYGAVQGLAALGPNVVRLLLLPNL 301
YGA+ GL+ LG V++ ++P +
Sbjct: 355 ASFYGALVGLSELGTEVIKAFIIPKI 380
>gi|327301659|ref|XP_003235522.1| transcription initiation factor TFIID complex subunit [Trichophyton
rubrum CBS 118892]
gi|326462874|gb|EGD88327.1| transcription initiation factor TFIID complex 60 kDa subunit
[Trichophyton rubrum CBS 118892]
Length = 431
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 206/376 (54%), Gaps = 44/376 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RT LTT DV AL++ +VEP+YG+ S PLRF A IG + LFY++D +V+F+
Sbjct: 48 MRHGKRTLLTTQDVSNALRVLDVEPLYGYESARPLRFGEATIGPGQPLFYVEDDEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTNNE-----QKDG 110
+I APLP+ P + S HWLA+EGVQP IP+N A + + S G N
Sbjct: 108 LINAPLPKVPREISFTAHWLAVEGVQPTIPQNPTAADTRHLELVSKGPNANANLAAMSGN 167
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKHILS ELQLYF+++ + S+ A SL D GLH LVPYF F
Sbjct: 168 ENVNVKPLVKHILSNELQLYFERVCNAFLDESNEEFRNSAFSSLKEDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN 230
++++V+ + + +L +M ++ L++NP + I+PYL +V
Sbjct: 228 ISEKVTHNIKDIFVLTQVMHMIEALIRNPTLYIDPYLGSSNDAV---------------E 272
Query: 231 HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-G 289
H+ LRD ++ LV I K+Y +TL+ RL +T L LDP + HYGA+ GL ++ G
Sbjct: 273 HFALRDLSSSLVGMIAKKYSQSSHTLKPRLARTFLKTFLDPGQTFGAHYGAIIGLQSIGG 332
Query: 290 PNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFP 349
PNV+R L++PNL Y +L+ + E +++ EA +V G ++
Sbjct: 333 PNVIRELIIPNLPVYEVVLKDAVTDEG----LRKAEAEKVTGVIIAV------------- 375
Query: 350 PLSSLPARSVWKTNGI 365
LS++ S+ TNG
Sbjct: 376 -LSTIQDESLAHTNGF 390
>gi|195128033|ref|XP_002008471.1| GI11798 [Drosophila mojavensis]
gi|193920080|gb|EDW18947.1| GI11798 [Drosophila mojavensis]
Length = 637
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 196/349 (56%), Gaps = 28/349 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H++R L+ D+D +LK+RN+EP YGF + + FR A G R+L + +DK+++ ++
Sbjct: 65 MHHAKRQKLSVKDIDMSLKVRNIEPQYGFMTKDFIPFRFASGGGRELHFTEDKEIDLNEI 124
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAI 96
+ PLD ++ HW +EG+QP +PEN P A
Sbjct: 125 TANSSFKIPLDLTLRSHWFVVEGIQPTVPENPPPLSKDSQLVDSVNPVIKLDQGLNKDAA 184
Query: 97 AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL +
Sbjct: 185 GKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRAEALQSLGS 243
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV
Sbjct: 244 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSV 303
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
+TC+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K
Sbjct: 304 MTCIVSKQLCMRPELDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDKT 363
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVK 322
L+ YG++ GL+ LG V+++ ++P L +EP +L N K
Sbjct: 364 HLSSLYGSIAGLSELGGEVIKVFIVPRLKFISERIEPHLLGTSMSNTDK 412
>gi|448520733|ref|XP_003868350.1| Taf60 TFIID and SAGA complex subunit [Candida orthopsilosis Co
90-125]
gi|380352690|emb|CCG25446.1| Taf60 TFIID and SAGA complex subunit [Candida orthopsilosis]
Length = 496
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/349 (37%), Positives = 192/349 (55%), Gaps = 48/349 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R L T D+D ALK+ NVEP+YG+ + PL F+ + G + L+Y+DD+++EF+
Sbjct: 56 MRHSKRKMLMTSDIDYALKILNVEPLYGYDNSQPLNFKETMVGAGGQTLYYVDDQEIEFE 115
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN--------------------------- 90
+I LP+ P + HWLAIEGVQP++P+N
Sbjct: 116 KLINQELPQVPRRCNFTAHWLAIEGVQPMVPQNPLPSDIKNLPPAIRGATSSYLGNDILT 175
Query: 91 ------APVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSR--S 142
V +G N+ + K VKH+LS+EL+LYFDK+ E+ +S
Sbjct: 176 WGSNSATGVDGQDGAEDGAKNKNPTDKEFDTKPLVKHVLSKELKLYFDKVVEVLISTDPE 235
Query: 143 DSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQ 202
L AL SL +D GLH LVPYF FVA++++ L N +L ++ V+ L N I
Sbjct: 236 KESLKNAALTSLKSDPGLHQLVPYFIQFVAEQITNELRNIEILSTMLEVISALADNKTIF 295
Query: 203 IEPYLHQLMPSVVTCLVAKRLGNRLAD----------NHWELRDFTAKLVAAICKRYGHV 252
++PY+H LMP V+T L+AKR+G + D N +R+F A L+ I K +G
Sbjct: 296 LDPYVHALMPCVLTLLLAKRIGPIVKDSTENYQETLRNQLAVREFAAILLEHIIKVHGSS 355
Query: 253 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
Y+TL+ R+T+TLL ALLD + + YGA+ GL G V++L+L+ NL
Sbjct: 356 YSTLRPRVTRTLLRALLDSTKPVGTQYGALLGLKNFGNEVLKLVLVGNL 404
>gi|195435680|ref|XP_002065807.1| GK19071 [Drosophila willistoni]
gi|194161892|gb|EDW76793.1| GK19071 [Drosophila willistoni]
Length = 631
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 194/340 (57%), Gaps = 28/340 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H++R L+ D+D ALK+RNVEP YGF + + FR A G R+L + +DK+++ ++
Sbjct: 67 MMHAKRHKLSVRDIDMALKVRNVEPQYGFVAKDFVPFRFASGGGRELHFTEDKEIDLSEL 126
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAI 96
+ PLD ++ HW +EG+QP +PEN P A
Sbjct: 127 TSNSSLKIPLDLTLRSHWFVVEGIQPTVPENPPPLSKDSQFMDSVNPVIKLDQGLNKDAA 186
Query: 97 AAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
P+ G ++ K+ + +K H LS E QLY+ +ITE V SD +AL SL +
Sbjct: 187 GKPTTGKMHKLKNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEPRRGEALQSLGS 245
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++P F+A+ V + NN +LL LMR+V LL NP + +E YLH+L+PSV
Sbjct: 246 DPGLHEMLPRMCTFIAEGVKVNVVQNNLALLIYLMRMVRALLDNPSLFLEKYLHELIPSV 305
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
+TC+V+K+L R DNHW LRDF ++L+A ICK + + N LQTR+T+ AL + K
Sbjct: 306 MTCIVSKQLCMRPELDNHWALRDFASRLMAQICKTFNTLTNNLQTRVTRIFSKALQNDKT 365
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEML 313
L+ YG++ GL+ LG V+++ ++P L +EP +L
Sbjct: 366 HLSSLYGSIAGLSELGGEVIKVFIIPRLKFISERIEPHLL 405
>gi|241953681|ref|XP_002419562.1| subunit of TFIID and SAGA complexes, putative; transcription
initiation factor TFIID subunit, putative [Candida
dubliniensis CD36]
gi|223642902|emb|CAX43157.1| subunit of TFIID and SAGA complexes, putative [Candida dubliniensis
CD36]
Length = 519
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 211/390 (54%), Gaps = 71/390 (18%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R LTT DV ALK+ N+EP+YG+ + PL ++ + G + L+Y+D+ ++EF+
Sbjct: 56 MRHSKRRQLTTSDVSNALKILNIEPLYGYDNTQPLNYKETMVGAGGQTLYYIDEHEIEFE 115
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGT----------- 103
+I LP+ P + HWLAIEGVQP++P+N + ++++ A G
Sbjct: 116 KLINQQLPKVPRQVNFTAHWLAIEGVQPMVPQNPLPSEIKSLPAVVRGATTSMLGNDILS 175
Query: 104 ------NNEQKDGLP----------------------------VEIKLPVKHILSRELQL 129
N E D +EIK +KH+LS+EL+L
Sbjct: 176 LGSKNENGESGDTTKHESELLSNGGSANHTNNNNSNKKSTEKDMEIKPLIKHVLSKELKL 235
Query: 130 YFDKITELAVSR--SDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFA 187
YFDK+ ++ +S L AL SL +D GLH LVPYF F+A++++ L N +L
Sbjct: 236 YFDKVVDVLISTDPEKEHLKNAALTSLKSDPGLHQLVPYFIQFIAEQITNQLRNIEILST 295
Query: 188 LMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG---NRLADNHWE----------L 234
++ V+ L+ N I ++PY+H LMP ++T L+AKR+G DN E +
Sbjct: 296 MLEVISALVDNKTIFLDPYVHALMPCILTLLLAKRIGPVIKLTQDNKQEWQDALKSQLAI 355
Query: 235 RDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVR 294
R+F A L+ I K YG Y+TL+ R+T+TLL ALLD + + YGA+ GL +G V++
Sbjct: 356 REFAAILLQHIIKVYGSSYSTLRPRITRTLLRALLDSTKPVGTQYGALLGLRNMGTEVLK 415
Query: 295 LLLLPNLGPYLSLLEPEMLLEKQKNEVKRH 324
L+LL NL + S ++EK +N+ +R
Sbjct: 416 LVLLGNLKVWYS-----AIIEKNENDYERQ 440
>gi|391340028|ref|XP_003744348.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Metaseiulus occidentalis]
Length = 582
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 127/321 (39%), Positives = 185/321 (57%), Gaps = 26/321 (8%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVI 60
RH +R L T D+D AL+++NVEP+YGF + FR A G R+L++ ++K+++ +++
Sbjct: 63 RHGKRKKLLTSDLDSALRVKNVEPLYGFTDPHFIPFRFASGGGRELYFHEEKEIDLNELV 122
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLP-------- 112
PLP+ PLD SI HWL+IEG QP +PEN P P + E D L
Sbjct: 123 TLPLPKLPLDVSIKAHWLSIEGTQPTVPENPP----PVPKDQQKQESLDPLSKMCKPQQA 178
Query: 113 ---------VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPL 163
V +K H LS E QLY+ +ITE V DS +AL SL++D GLH +
Sbjct: 179 ERTAKHVETVRVKQLATHELSVEQQLYYKEITEACVGSDDS-RRAEALQSLSSDPGLHQM 237
Query: 164 VPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 221
+P F+++ V + NN + L L+R+V LL N + +E YLH+L+PSV TC+V++
Sbjct: 238 LPRLCTFISEGVKVNVVQNNLAFLIYLIRMVKALLDNQSLYLEKYLHELIPSVATCIVSR 297
Query: 222 RLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 280
+L R DNHW LRDF ++L++ ICK + N +QTR+T+ N L + + L YG
Sbjct: 298 QLCTRPEVDNHWALRDFASRLMSQICKNFNTSTNGIQTRVTRIFSNTLSNDRMPLASTYG 357
Query: 281 AVQGLAALGPNVVRLLLLPNL 301
AV + LG VVR LL+P +
Sbjct: 358 AVSAIGELGTEVVRSLLIPRI 378
>gi|449676272|ref|XP_002168543.2| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Hydra magnipapillata]
Length = 496
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 143/385 (37%), Positives = 218/385 (56%), Gaps = 53/385 (13%)
Query: 4 SRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEA 62
S+R LT+ D+D +LK++NVEPVYGF+S + FR A G R++++ ++ +V+ +D+I
Sbjct: 66 SKRLKLTSRDIDHSLKVQNVEPVYGFSSSDFVPFRNASGGGREVYFKEETEVDLEDIISQ 125
Query: 63 PLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------VQAIAAPS----NGTNNEQ 107
LP+ PL+ +I HWLAI+G+QP IPEN P A A P+ N T+ Q
Sbjct: 126 NLPKIPLEVTIKSHWLAIDGIQPAIPENPPPISKDMQMQEVASAFANPAVCEVNITDFSQ 185
Query: 108 KDGLPV-------------------------EIKL---PVKHILSRELQLYFDKITELAV 139
+ + EIK V H LS E QL++ +ITE V
Sbjct: 186 DNKSQLKDIKTKDSKDKKKVEDTKKLDFGKQEIKRFKPLVTHELSVEQQLFYKEITEACV 245
Query: 140 SRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVWNLLQ 197
S+ V +AL SL+ D GL+ L+P FT F+A+ +V+ G +N +LL L+R++ L++
Sbjct: 246 G-SNEVKRTEALNSLSNDPGLYQLLPRFTTFIAEGVKVNVGQHNLALLIYLLRMIKALME 304
Query: 198 NPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTL 256
N + IE YLH+L+P+V+TC+V+K+L R DNHW LRDF A+L+A ICK + N +
Sbjct: 305 NSTLYIEKYLHELIPAVITCVVSKQLCPRPDFDNHWALRDFAARLLAQICKHFTTPTNNI 364
Query: 257 QTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEK 316
Q+R+TK L L K HYGAV GLA +G ++++L+P L E +++LE
Sbjct: 365 QSRVTKALCKTLFLDKAPAASHYGAVAGLAEIGLEAIKVILIPRLKN-----ESDLILEA 419
Query: 317 QKNEVKRHEAWRVYGALLQAAGQCI 341
+N ++ A + L++ A I
Sbjct: 420 MENPSEKDAAEHLQALLVKHASIAI 444
>gi|448100373|ref|XP_004199334.1| Piso0_002770 [Millerozyma farinosa CBS 7064]
gi|359380756|emb|CCE82997.1| Piso0_002770 [Millerozyma farinosa CBS 7064]
Length = 495
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 197/349 (56%), Gaps = 48/349 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRHS+R L T D++ AL++ N+EP+YG+ + L F+ + G + L+Y+DDK+++ +
Sbjct: 58 MRHSKRRLLMTSDINHALEMLNIEPLYGYDNTQQLNFKETLVGAGGQTLYYIDDKEMDLE 117
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAI------AAPSNGTNNEQK 108
+I PLP P T+ HWLA+EGVQP+IP+N + +++I A S N+
Sbjct: 118 KLINQPLPTVPRQTTFTAHWLAVEGVQPMIPQNPLPSEIKSIPPFARGATSSTLGNDITN 177
Query: 109 DGLP-----------------------VEIKLPVKHILSRELQLYFDKITELAVSR--SD 143
GL E+K VKH+LS+EL+LYFDK+ E+ +S
Sbjct: 178 SGLSSDVTIKDRDDQSRNKNSSLSQNASEVKPLVKHVLSKELKLYFDKVVEVLISTDPEK 237
Query: 144 SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQI 203
L AL SL D GLH LVPYF FVA++++ L N +L ++ V+ L N + +
Sbjct: 238 ENLKYAALTSLKNDPGLHQLVPYFIQFVAEQITNQLRNIEILTTMLEVISALADNKTLFL 297
Query: 204 EPYLHQLMPSVVTCLVAKRLGNRLADN-----------HWELRDFTAKLVAAICKRYGHV 252
+PY+H LMP ++T +AKR+G D+ +R+F A L+ I K YG
Sbjct: 298 DPYVHTLMPCILTLQLAKRIGPTSKDDESSEAEDSLKKQLAVREFAAILLDHIIKVYGSS 357
Query: 253 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
Y+TL+ R+T+TLL ALLD + + HYG + GL +GP V++L+++ NL
Sbjct: 358 YSTLKARVTRTLLRALLDYSKPVGTHYGTLLGLKNMGPEVIKLVVIGNL 406
>gi|345485287|ref|XP_001599379.2| PREDICTED: transcription initiation factor TFIID subunit 6 [Nasonia
vitripennis]
Length = 663
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/329 (39%), Positives = 189/329 (57%), Gaps = 29/329 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MR RR LTT D+D ALK +N+EP YGF + + FR A G R+L + ++K+++ ++
Sbjct: 56 MRQGRRQKLTTHDIDHALKAKNIEPTYGFFAKEHIPFRFASGGGRELHFTEEKEIDLNEI 115
Query: 60 IEAP----LPRAPLDTSIVCHWLAIEGVQPVIPENAP-----VQAIAA--PSNGTNNEQK 108
I P+ PL+T++ HWL I+G+QP IPEN P VQ + + P + N+
Sbjct: 116 ISMAGGPNWPKLPLETNLRSHWLCIDGIQPTIPENPPPVSKEVQKLESVDPISNRNSNSN 175
Query: 109 DGLP------------VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
G P V +K H LS E QLY+ +ITE V SD +A SL+
Sbjct: 176 LGKPGHKSHKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEAKRVEAFQSLSA 234
Query: 157 DSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSV 214
D GLH ++ F+A+ V + NN ++L LMR+V LL NP + +E YLH+L+PSV
Sbjct: 235 DPGLHEMLARMCTFIAEGVRINVVQNNLAILIYLMRMVKALLDNPSLYLEKYLHELIPSV 294
Query: 215 VTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
+TC+V+K+L R DNHW LRDF A+L+ ICK + N +QTR+T+ AL + +
Sbjct: 295 ITCIVSKQLCARPEMDNHWALRDFAARLIGQICKNFNTTTNNIQTRITRIFSQALANNNQ 354
Query: 274 A-LTQHYGAVQGLAALGPNVVRLLLLPNL 301
L YGA+ GL LGP V++ L++P +
Sbjct: 355 TPLASLYGAIYGLCDLGPEVIKALVIPKI 383
>gi|380018610|ref|XP_003693220.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Apis florea]
Length = 630
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 193/334 (57%), Gaps = 34/334 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MRH +R +TT D+D ALK++N+EP YGF + + FR A G R+L ++++K+++ +V
Sbjct: 57 MRHGKRQRMTTHDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEV 116
Query: 60 IE----APLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQ 107
I P+ PL+ ++ HWL I+GVQP IPEN P ++++ S TN Q
Sbjct: 117 ISMSGGQTWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESVDPTSKLTNKSQ 176
Query: 108 ----------------KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQAL 151
++ V +K H LS E QLY+ +ITE V SD +AL
Sbjct: 177 NIGVGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEAL 235
Query: 152 VSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 209
SL+ D GLH ++ F+A+ V + NN +LL LMR+V LL NP + +E YLH+
Sbjct: 236 QSLSADPGLHEMLARMCTFIAEGVRVNVVQNNLALLIYLMRMVKALLDNPSLYLEKYLHE 295
Query: 210 LMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
L+PS+ TC+V+++L R DNHW LRDF ++L+A ICK + N +QTR+T+ AL
Sbjct: 296 LIPSIATCIVSRQLCMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQAL 355
Query: 269 L-DPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
+ + L YGA++GL LGP V++ L++P +
Sbjct: 356 AKNSQTPLASLYGAIEGLCELGPEVIKALVIPKI 389
>gi|66544429|ref|XP_393233.2| PREDICTED: transcription initiation factor TFIID subunit 6 [Apis
mellifera]
Length = 629
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 193/334 (57%), Gaps = 34/334 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MRH +R +TT D+D ALK++N+EP YGF + + FR A G R+L ++++K+++ +V
Sbjct: 56 MRHGKRQRMTTHDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEV 115
Query: 60 IE----APLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQ 107
I P+ PL+ ++ HWL I+GVQP IPEN P ++++ S TN Q
Sbjct: 116 ISMSGGQTWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESVDPTSKLTNKSQ 175
Query: 108 ----------------KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQAL 151
++ V +K H LS E QLY+ +ITE V SD +AL
Sbjct: 176 NIGVGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEAL 234
Query: 152 VSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 209
SL+ D GLH ++ F+A+ V + NN +LL LMR+V LL NP + +E YLH+
Sbjct: 235 QSLSADPGLHEMLARMCTFIAEGVRVNVVQNNLALLIYLMRMVKALLDNPSLYLEKYLHE 294
Query: 210 LMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
L+PS+ TC+V+++L R DNHW LRDF ++L+A ICK + N +QTR+T+ AL
Sbjct: 295 LIPSIATCIVSRQLCMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQAL 354
Query: 269 L-DPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
+ + L YGA++GL LGP V++ L++P +
Sbjct: 355 AKNSQTPLASLYGAIEGLCELGPEVIKALVIPKI 388
>gi|67902490|ref|XP_681501.1| hypothetical protein AN8232.2 [Aspergillus nidulans FGSC A4]
gi|40739698|gb|EAA58888.1| hypothetical protein AN8232.2 [Aspergillus nidulans FGSC A4]
gi|259481015|tpe|CBF74165.1| TPA: transcription initiation factor TFIID complex 60 kDa subunit
(AFU_orthologue; AFUA_5G03680) [Aspergillus nidulans
FGSC A4]
Length = 445
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 207/347 (59%), Gaps = 18/347 (5%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRHSRRT LTT D+ AL++ +VEP+YG+ + PL+F A +G + LFY++D++V+F+
Sbjct: 48 MRHSRRTLLTTQDIALALRVLDVEPLYGYETTRPLKFGEASLGPGQPLFYVEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN--------APVQAIAAPSNGTNNEQKDG 110
+I APLPR P + S HWLA+EGVQP IP+N + + +N T
Sbjct: 108 LINAPLPRVPREISFTAHWLAVEGVQPSIPQNPTAADSRNLELMSKGPNANATLAAMSGN 167
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
V +K VKH+LS+ELQLYF+K+ + S SL D GLH LVPYF F
Sbjct: 168 GNVAVKPLVKHVLSKELQLYFEKVCNAFLDESSEKYRTSGYASLREDPGLHQLVPYFVQF 227
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD- 229
++++V+ GL + +L +M + L+QN + ++PY+ L+P ++TCL+ ++LG AD
Sbjct: 228 ISEKVTHGLKDIFVLTQVMHMAEALVQNKSLYVDPYIASLVPPILTCLIGRQLGGT-ADL 286
Query: 230 -NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
+ LRD A L+ I +Y H +TL+ RL ++ L LLDP + HYGA+ GL A+
Sbjct: 287 SEQFALRDLAAALLGLIATKYSHSSHTLKPRLARSCLKTLLDPSKPFGAHYGAIIGLHAV 346
Query: 289 GPN-VVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 334
G + VR+L++PNL Y +LL+ + + +R EA +V G LL
Sbjct: 347 GGSEAVRVLIIPNLPIYGNLLKDGL----ADDSARRPEAEKVLGLLL 389
>gi|255719722|ref|XP_002556141.1| KLTH0H06006p [Lachancea thermotolerans]
gi|238942107|emb|CAR30279.1| KLTH0H06006p [Lachancea thermotolerans CBS 6340]
Length = 511
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 206/379 (54%), Gaps = 61/379 (16%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGP----LRFRR--AIGYRDLFYLDDKDVE 55
RH++R LTT+D+ AL++ NVEP+YG+ G F + A G + L+YL+D++V+
Sbjct: 57 RHAKREVLTTEDIARALRVLNVEPLYGYQDGSARAKDASFSKVNAPGGQTLYYLNDEEVD 116
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQ------------AIAAPSNGT 103
F +I PLP+ P + HWLAIEGVQP IP+N + AI N T
Sbjct: 117 FDKLINEPLPKVPRLPTFTTHWLAIEGVQPTIPQNPSLNDIRMSQPPIVRGAIVTTINDT 176
Query: 104 NNEQ--------------KDGLPVEIKLPVKHILSRELQLYFDKITELAVS--RSDSV-- 145
+ + K G E+K VKH+LS+ELQ+YFDK+ +S R D
Sbjct: 177 SFQTSASDEKETQHISLIKPGQANEVKPLVKHVLSKELQIYFDKVVGALISKDRDDKAHH 236
Query: 146 LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEP 205
L AL SL +D+GLH LVPYF F+A++++ L++ LL ++ ++++LL N H+ ++P
Sbjct: 237 LRAAALTSLRSDTGLHQLVPYFIQFIAEQITHNLSDLDLLTTMLEMIYSLLSNTHVFLDP 296
Query: 206 YLHQLMPSVVTCLVAKRLGN-----------------------RLADNHWELRDFTAKLV 242
Y+H LMPS++T L+AK+LG+ + LRDF A L+
Sbjct: 297 YIHSLMPSILTLLLAKKLGDNPPPNSSKEQREASEKVSKDTGTEFLEKTNALRDFAASLL 356
Query: 243 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG 302
+ +++ VY +L+ R+ +TLL LD R+ +YG ++G+A LGP VR L NL
Sbjct: 357 DHVLRKFPQVYKSLKPRVMRTLLKTFLDTNRSFGTYYGCIKGVAVLGPESVR-FFLGNLQ 415
Query: 303 PYLSLL-EPEMLLEKQKNE 320
+ +L+ E E K+E
Sbjct: 416 SWANLVFEEHTTKENDKDE 434
>gi|383847259|ref|XP_003699272.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Megachile rotundata]
Length = 630
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 193/334 (57%), Gaps = 34/334 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MRH +R +TT D+D ALK++N+EP YGF + + FR A G R+L ++++K+++ +V
Sbjct: 56 MRHGKRQRMTTYDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEV 115
Query: 60 IEAP----LPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQ 107
I P+ PL+ ++ HWL I+GVQP IPEN P ++++ S +N Q
Sbjct: 116 ISMSSGQTWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESVDPTSKLSNKSQ 175
Query: 108 ----------------KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQAL 151
++ V +K H LS E QLY+ +ITE V SD +AL
Sbjct: 176 NIGVGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEAL 234
Query: 152 VSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 209
SL+ D GLH ++ F+A+ V + NN +LL LMR+V LL NP + +E YLH+
Sbjct: 235 QSLSADPGLHEMLARMCTFIAEGVRVNVVQNNLALLIYLMRMVKALLDNPSLYLEKYLHE 294
Query: 210 LMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
L+PS+ TC+V+++L R DNHW LRDF ++L+A ICK + N +QTR+T+ AL
Sbjct: 295 LIPSIATCIVSRQLCMRPDVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQAL 354
Query: 269 L-DPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
+ + L YGA++GL LGP V++ L++P +
Sbjct: 355 AKNSQTPLASLYGAIEGLCELGPEVIKALVIPKI 388
>gi|350407905|ref|XP_003488237.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Bombus impatiens]
Length = 640
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 193/334 (57%), Gaps = 34/334 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MRH +R +TT D+D ALK++N+EP YGF + + FR A G R+L ++++K+++ +V
Sbjct: 66 MRHGKRQRMTTHDIDHALKIKNIEPTYGFFAKDHVPFRFASGGGRELHFVEEKEIDLNEV 125
Query: 60 IE----APLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQ 107
I P+ PL+ ++ HWL I+GVQP IPEN P ++++ S TN Q
Sbjct: 126 ISMSGGQTWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKDIQKLESVDPTSKLTNKSQ 185
Query: 108 ----------------KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQAL 151
++ V +K H LS E QLY+ +ITE V SD +AL
Sbjct: 186 NIGVGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEAL 244
Query: 152 VSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 209
SL+ D GLH ++ F+A+ V + N+ +LL LMR+V LL NP + +E YLH+
Sbjct: 245 QSLSADPGLHEMLARMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEKYLHE 304
Query: 210 LMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
L+PS+ TC+V+++L R DNHW LRDF ++L+A ICK + N +QTR+T+ AL
Sbjct: 305 LIPSIATCIVSRQLCMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQAL 364
Query: 269 L-DPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
+ + L YGA++GL LGP V++ L++P +
Sbjct: 365 AKNSQTPLASLYGAIEGLCELGPEVIKALVIPKI 398
>gi|340721969|ref|XP_003399385.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Bombus terrestris]
Length = 640
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/334 (37%), Positives = 193/334 (57%), Gaps = 34/334 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MRH +R +TT D+D ALK++N+EP YGF + + FR A G R+L ++++K+++ +V
Sbjct: 66 MRHGKRQRMTTHDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEV 125
Query: 60 IE----APLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAIAAPSNGTNNEQ 107
+ P+ PL+ ++ HWL I+GVQP IPEN P ++++ S TN Q
Sbjct: 126 VSISGGQTWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKDVQKLESVDPTSKLTNKSQ 185
Query: 108 ----------------KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQAL 151
++ V +K H LS E QLY+ +ITE V SD +AL
Sbjct: 186 NIGVGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEAL 244
Query: 152 VSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 209
SL+ D GLH ++ F+A+ V + N+ +LL LMR+V LL NP + +E YLH+
Sbjct: 245 QSLSADPGLHEMLARMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEKYLHE 304
Query: 210 LMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
L+PS+ TC+V+++L R DNHW LRDF ++L+A ICK + N +QTR+T+ AL
Sbjct: 305 LIPSIATCIVSRQLCMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQAL 364
Query: 269 L-DPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
+ + L YGA++GL LGP V++ L++P +
Sbjct: 365 AKNSQTPLASLYGAIEGLCELGPEVIKALVIPKI 398
>gi|366993030|ref|XP_003676280.1| hypothetical protein NCAS_0D03380 [Naumovozyma castellii CBS 4309]
gi|342302146|emb|CCC69919.1| hypothetical protein NCAS_0D03380 [Naumovozyma castellii CBS 4309]
Length = 516
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 196/353 (55%), Gaps = 57/353 (16%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGG----PLRFRR--AIGYRDLFYLDDKDVE 55
RHS+R LTTDDV +AL++ NVEP+YG+ G + F + G + ++YL++++++
Sbjct: 57 RHSKREILTTDDVAKALRILNVEPLYGYHDGSAENKSVSFAKVNTSGGQSVYYLNEEEID 116
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN----------------APVQAIAAP 99
F +I PLP+ P + HWLA+EG+QP I EN A V A+
Sbjct: 117 FDKLINEPLPQVPRIPTFTAHWLAVEGIQPAIVENPNLNDVRISQPPIIRGAIVTALNDA 176
Query: 100 SNGT----------------NNEQ----KDGLPVEIKLPVKHILSRELQLYFDKITELAV 139
S T N EQ K G E+K VKH+LS+ELQ+YF+K+ +
Sbjct: 177 SIQTSSSAAISSRISLNEAKNGEQFSMVKPGQNTEVKPLVKHVLSKELQIYFNKVIAALI 236
Query: 140 SRSDSV----LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 195
++ D+ + AL SL TDSGLH LVPYF F+A++++ L+N LL ++ ++++L
Sbjct: 237 TKEDTEDAQRMKTAALTSLKTDSGLHQLVPYFIQFIAEQITHNLSNLELLTTILEMIYSL 296
Query: 196 LQNPHIQIEPYLHQLMPSVVTCLVAKRLG-----------NRLADNHWELRDFTAKLVAA 244
L NP I ++PY+H LMPS++T L+AK+LG + + LRDF A L+
Sbjct: 297 LSNPSIFLDPYIHSLMPSILTLLLAKKLGGAPTQDTPEEMHEFLEKTNALRDFAASLLEY 356
Query: 245 ICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+ K++ +Y +L+ R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 357 VLKKFPQIYKSLKPRITRTLLKTFLDTNRVFGTYYGCLKGISVLESESIRFFL 409
>gi|449017070|dbj|BAM80472.1| TATA-box binding protein-associated factor 6 [Cyanidioschyzon
merolae strain 10D]
Length = 459
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 142/380 (37%), Positives = 205/380 (53%), Gaps = 46/380 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI--------GYRDLFYLDDK 52
MRHS+R L T D+ AL+LRN+EP+YGF+S F G ++++ D+
Sbjct: 63 MRHSKRRRLKTSDIAAALRLRNLEPLYGFSSNESAPFVGVTLPGESSLGGSNTVYFVGDE 122
Query: 53 DVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-APVQAIAAPS----------- 100
+V+ +D+++ LPR PL+T++ HWLAIEG+QP IP+N A V + A S
Sbjct: 123 EVDLRDILDGELPRVPLETTLALHWLAIEGIQPRIPQNPADVSSTARQSLTYILRDTVHD 182
Query: 101 ----NGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRS----DSVLFKQALV 152
N ++ D V + V+H++SRELQLY++ E A++RS D L L
Sbjct: 183 EPGRNASDTPDTDTGMVSFRPKVRHVVSRELQLYYELAIE-ALTRSAQETDETLRNACLA 241
Query: 153 SLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMP 212
S+A D GL LVPYF F+ VS + L M++ LL+N ++ +EPYLHQLMP
Sbjct: 242 SIARDPGLQQLVPYFVAFLFHHVSNHCRDLPQLQVSMKLARALLENRYVGLEPYLHQLMP 301
Query: 213 SVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPK 272
S++TC+V + L ++HW LR+ A L+A + K YG Y L R+ +TL AL+
Sbjct: 302 SIITCIVGRYLCRTADEDHWTLRENAASLLADVHKMYGGTYENLLPRIAETLRLALVGED 361
Query: 273 RALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEP-EMLLEKQKNEV---------- 321
+ALT YGA+ LGP +V ++P L P +LLE E +E + E
Sbjct: 362 KALTTQYGAIVAFQELGPALVEAHIVP-LAP--NLLERWERKIEHELGEAPIKSAELELA 418
Query: 322 ---KRHEAWRVYGALLQAAG 338
K E RVY AL +A G
Sbjct: 419 TSPKWSELRRVYAALAKALG 438
>gi|156044847|ref|XP_001588979.1| hypothetical protein SS1G_09612 [Sclerotinia sclerotiorum 1980]
gi|154694007|gb|EDN93745.1| hypothetical protein SS1G_09612 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 469
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 129/323 (39%), Positives = 191/323 (59%), Gaps = 20/323 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
M +RT L T D+ +ALK+ +VEP+YG+ S PLRF A +G + LFY++D++V+F+
Sbjct: 52 MHQGKRTVLGTQDISQALKVLDVEPLYGYESTRPLRFGEASLGPGQPLFYIEDEEVDFEK 111
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIA-----APSNGTNNEQKDGLP- 112
+I APLP+ P D S HWLA+EGVQP IP+N P A A P N L
Sbjct: 112 LINAPLPKVPRDMSFTAHWLAVEGVQPSIPQN-PTTAEARANDLVPKGPGANPALGALAG 170
Query: 113 ---VEIKLPVKHILSRELQLYFDKITELAVSRSDS----VLFKQALVSLATDSGLHPLVP 165
V +K VKHI+S+EL L+FDKI + + L + AL S+ +D GLH LVP
Sbjct: 171 NDNVSVKPLVKHIVSKELILFFDKIRAAILDDDNDPEVVTLRESALESVRSDPGLHQLVP 230
Query: 166 YFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN 225
YF +F+A++V+ L N +L ++++ L+ N + + PY+ L P ++TCLV + LG
Sbjct: 231 YFVHFIAEKVTHSLGNLFVLQQMLKLSDALISNKTLFVNPYISSLCPPILTCLVGRTLGT 290
Query: 226 RLAD---NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAV 282
+D ++LRD A L+ I K+Y L+ RL ++ L LDP R+ ++YGA+
Sbjct: 291 GASDELKEKYQLRDTAASLIGVISKKYTESNAQLRARLARSCLKFFLDPTRSPGEYYGAI 350
Query: 283 QGLAAL-GPNVVRLLLLPNLGPY 304
GL A+ GP+ V+ L+LPNL +
Sbjct: 351 SGLLAIGGPDGVKALILPNLNAF 373
>gi|402863000|ref|XP_003895825.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
6 [Papio anubis]
Length = 602
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 194/321 (60%), Gaps = 21/321 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 60 IEAPLPRAPLDTSIVC--------HWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK 108
I PLPR PLD + ++ +P E+ P++ A ++G E+K
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATAADGKGKEKK 120
Query: 109 -----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPL 163
+G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ +
Sbjct: 121 APPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQM 179
Query: 164 VPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 221
+P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V++
Sbjct: 180 LPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSR 239
Query: 222 RLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 280
+L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG
Sbjct: 240 QLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYG 299
Query: 281 AVQGLAALGPNVVRLLLLPNL 301
++ GLA LG +V++ L+LP L
Sbjct: 300 SIAGLAELGHDVIKTLILPRL 320
>gi|426255396|ref|XP_004021334.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 6, partial [Ovis aries]
Length = 719
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 189/339 (55%), Gaps = 40/339 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 104 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 163
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 164 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 223
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AAP++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 224 LKGKGQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 283
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNP-HIQI 203
+AL S+ATD GL+ ++P F+ F+++ V RG R P I
Sbjct: 284 KR-AEALQSIATDPGLYQMLPRFSTFISEGV-RGHGRLEWGSGGGRAGEEAHGGPPCCPI 341
Query: 204 EPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTK 262
+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TK
Sbjct: 342 PAXVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITK 401
Query: 263 TLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
T + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 402 TFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 440
>gi|332866943|ref|XP_003318661.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
4 [Pan troglodytes]
gi|397489552|ref|XP_003815789.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
5 [Pan paniscus]
Length = 601
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 194/321 (60%), Gaps = 21/321 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 60 IEAPLPRAPLDTSIVC--------HWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK 108
I PLPR PLD + ++ +P E+ P++ A ++G E+K
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKK 120
Query: 109 -----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPL 163
+G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ +
Sbjct: 121 APPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQM 179
Query: 164 VPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 221
+P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V++
Sbjct: 180 LPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSR 239
Query: 222 RLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 280
+L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG
Sbjct: 240 QLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYG 299
Query: 281 AVQGLAALGPNVVRLLLLPNL 301
++ GLA LG +V++ L+LP L
Sbjct: 300 SIAGLAELGHDVIKTLILPRL 320
>gi|193783615|dbj|BAG53526.1| unnamed protein product [Homo sapiens]
Length = 601
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 194/321 (60%), Gaps = 21/321 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 60 IEAPLPRAPLDTSIVC--------HWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK 108
I PLPR PLD + ++ +P E+ P++ A ++G E+K
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKK 120
Query: 109 -----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPL 163
+G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ +
Sbjct: 121 APPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQM 179
Query: 164 VPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 221
+P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V++
Sbjct: 180 LPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSR 239
Query: 222 RLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 280
+L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG
Sbjct: 240 QLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYG 299
Query: 281 AVQGLAALGPNVVRLLLLPNL 301
++ GLA LG +V++ L+LP L
Sbjct: 300 SIAGLAELGHDVIKTLILPRL 320
>gi|198427195|ref|XP_002127739.1| PREDICTED: similar to Transcription initiation factor TFIID subunit
6 (Transcription initiation factor TFIID 70 kDa subunit)
(TAF(II)70) (TAFII-70) (TAFII-80) (TAFII80) (p80) [Ciona
intestinalis]
Length = 557
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 210/376 (55%), Gaps = 41/376 (10%)
Query: 3 HSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIE 61
H + LT D+D LK +N EP+YGF S + FR A G R+L ++++K+++ D+I
Sbjct: 67 HRKSNKLTCQDIDNTLKSKNQEPLYGFISDEFIPFRFASGGGRELHFIEEKELDLNDIIN 126
Query: 62 APLPRAPLDTSIVCHWLAIEGVQPVIPEN---------------------APVQAIAAPS 100
LP+ P D ++ HWLAIEGVQP +PEN V A+ + +
Sbjct: 127 GVLPKIPHDVAMKAHWLAIEGVQPSVPENPVPETHFSIDVLKKPEVKNVRTGVDALKSCT 186
Query: 101 NGTNN------EQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSL 154
NN + + V +K H LS E QLY+ +ITE AV S++ +AL SL
Sbjct: 187 VPNNNPLTSAKKPESSSLVPLKARFTHELSVEQQLYYKEITEAAVGSSEARR-AEALQSL 245
Query: 155 ATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMP 212
ATD GL ++P F+ FV++ V + NN +LL LMR+V L+ N + +E YLH+++P
Sbjct: 246 ATDPGLSQMLPRFSTFVSEGVRVNVVQNNLALLIYLMRMVKALMDNSTLNLEKYLHEMIP 305
Query: 213 SVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP 271
+V+TC+V+++L R DNHW LRD+ A+L+A +C+ + N +Q+R+T T L D
Sbjct: 306 AVMTCIVSRQLCTRPDVDNHWALRDYAARLMAQVCRSFSTSTNLIQSRITGTFCKCLHDD 365
Query: 272 KRALTQHYGAVQGLAALGPNVVRLLLLPNL---GPYL-SLLEPEMLLEKQKNEVKRHEAW 327
K +L YG+V GLA LG +VV+ L LP L G + ++LE +L N + R A
Sbjct: 366 KSSLAARYGSVAGLAELGTDVVQSLALPRLQVEGERIKNILESPLL-----NPIDRTAAE 420
Query: 328 RVYGALLQAAGQCIYD 343
+ G L++ G I +
Sbjct: 421 HLRGLLVKHCGPVIKN 436
>gi|426357186|ref|XP_004045928.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
2 [Gorilla gorilla gorilla]
Length = 601
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 194/321 (60%), Gaps = 21/321 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 60 IEAPLPRAPLDTSIVC--------HWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK 108
I PLPR PLD + ++ +P E+ P++ A ++G E+K
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKK 120
Query: 109 -----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPL 163
+G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ +
Sbjct: 121 APPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQM 179
Query: 164 VPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 221
+P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V++
Sbjct: 180 LPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSR 239
Query: 222 RLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 280
+L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG
Sbjct: 240 QLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYG 299
Query: 281 AVQGLAALGPNVVRLLLLPNL 301
++ GLA LG +V++ L+LP L
Sbjct: 300 SIAGLAELGHDVIKTLILPRL 320
>gi|367005434|ref|XP_003687449.1| hypothetical protein TPHA_0J01940 [Tetrapisispora phaffii CBS 4417]
gi|357525753|emb|CCE65015.1| hypothetical protein TPHA_0J01940 [Tetrapisispora phaffii CBS 4417]
Length = 507
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 193/351 (54%), Gaps = 55/351 (15%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGG----PLRFRR--AIGYRDLFYLDDKDVE 55
RHS+R LTTDD+ +AL++ NVEP+YG+ G + F R A G + L+Y+DD++V+
Sbjct: 57 RHSKRDLLTTDDIAKALRILNVEPLYGYHDGSARNRSITFNRVSAQGGQSLYYVDDEEVD 116
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN------------------------A 91
F +I PLP+ P + HWLA+EG+QP I +N
Sbjct: 117 FDKLINEPLPQVPRLPTFTTHWLAVEGIQPAIAQNPNLNDIRVSQPPMVRGAIVTALNDN 176
Query: 92 PVQAIAAPSNGTNNEQKD---------GLPVEIKLPVKHILSRELQLYFDKITELAV--- 139
+Q+ ++ + + +E KD G EIK VKH+LS+ELQ+YF+K+
Sbjct: 177 SIQSSSSTAPISLSEDKDSYQASTVKPGQNTEIKPLVKHVLSKELQIYFNKVVSALTNPN 236
Query: 140 --SRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQ 197
S + AL SL TDSGLH LVPYF F+A++++ L++ LL ++ +++ LL
Sbjct: 237 IESEEAQYMKAAALSSLKTDSGLHQLVPYFIQFIAEQITHHLSDLDLLSTILEMIYALLS 296
Query: 198 NPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAIC 246
N I ++PY+H LMPS++T L+AK++G + E LRDF A L+ +
Sbjct: 297 NESIFLDPYIHSLMPSILTLLLAKKIGGSQNEESAESTSEFLEKTNALRDFAASLLDYLL 356
Query: 247 KRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
K+Y +Y +L+ R+T+TLL LD RA +YG ++G++ L +R L
Sbjct: 357 KKYPQIYKSLKPRVTRTLLKTFLDTNRAFGTYYGCLRGISVLEAESIRFFL 407
>gi|307198511|gb|EFN79416.1| Transcription initiation factor TFIID subunit 6 [Harpegnathos
saltator]
Length = 640
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/334 (37%), Positives = 194/334 (58%), Gaps = 34/334 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MRH +R +T D+D ALK+RN+EP YGF S + FR A G R+L ++++K+++ +V
Sbjct: 56 MRHGKRKRMTAYDIDHALKVRNIEPTYGFYSKDHIPFRFASGGGRELHFVEEKEIDLNEV 115
Query: 60 IEAP----LPRAPLDTSIVCHWLAIEGVQPVIPENAP-----VQAIAA--PSNGTNNEQK 108
+ P+ PL+ ++ HWL+I+GVQP IPEN P VQ + + P+ +N+ +
Sbjct: 116 VSTTGGQTWPKLPLEITLRSHWLSIDGVQPTIPENPPPVSKDVQKLESVDPTIKLSNKNQ 175
Query: 109 DGL-----------------PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQAL 151
+ V +K H LS E QLY+ +ITE V SD +AL
Sbjct: 176 NIGIGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEAL 234
Query: 152 VSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 209
SL+ D GLH ++ F+A+ V + N+ +LL LMR+V LL+NP + +E YLH+
Sbjct: 235 QSLSADPGLHEMLARMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLENPSLYLEKYLHE 294
Query: 210 LMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
L+PSV TC+V+++L + DNHW LRDF ++L++ ICK + N +QTR+T+ AL
Sbjct: 295 LIPSVATCIVSRQLCMKPEVDNHWALRDFASRLMSQICKNFNTSTNNVQTRVTRMFSQAL 354
Query: 269 LDPKRA-LTQHYGAVQGLAALGPNVVRLLLLPNL 301
+ L YGA++GL LGP V++ L++P +
Sbjct: 355 AKNNQIPLASLYGAIEGLCELGPEVIKSLVIPKI 388
>gi|374108757|gb|AEY97663.1| FAFL020Wp [Ashbya gossypii FDAG1]
Length = 504
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 193/343 (56%), Gaps = 48/343 (13%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGP----LRFRRAIGY--RDLFYLDDKDVE 55
RHS+R LTTDD+ AL++ NVEP+YG+ + + + G + ++Y++D++V+
Sbjct: 62 RHSKRDVLTTDDIARALRVLNVEPLYGYEDNSTRDKEVSYSKVTGQGGQTMYYVNDEEVD 121
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQ------------AIAAPSNGT 103
F +I PLP P + HWLA+EGVQP IP+N + AI N T
Sbjct: 122 FDKLINEPLPHVPRLPTFTTHWLAVEGVQPAIPQNPNLNELRMTQLPLTRGAIVTALNDT 181
Query: 104 N-------------NEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ- 149
+ ++ K G E+K VKH+LS+ELQ+YFDK+ A++ D L Q
Sbjct: 182 SIQTSVSEEKAEHVSQVKPGQTNEVKPLVKHVLSKELQIYFDKVVG-ALTSKDQTLNAQH 240
Query: 150 ----ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEP 205
AL SL +D+GLH LVPYF F+A++++ L++ LL ++ ++++LL N + ++P
Sbjct: 241 MKVAALTSLKSDTGLHQLVPYFIQFIAEQITHNLSDLDLLTTMLEMIYSLLSNQSVFLDP 300
Query: 206 YLHQLMPSVVTCLVAKRLGNR-----------LADNHWELRDFTAKLVAAICKRYGHVYN 254
Y+H LMPS++T L+AK+LG + LRDF++ L+ + +++ VY
Sbjct: 301 YIHSLMPSILTLLLAKKLGGSPSSTSPEDEQDFLEKTIALRDFSSTLLDHVLQKFPQVYK 360
Query: 255 TLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+L+ R+T+TLL LD R+ +YG ++G+ LG +R L
Sbjct: 361 SLKPRVTRTLLKTFLDSNRSFGTYYGCIRGVCILGNETIRFFL 403
>gi|431898257|gb|ELK06952.1| Transcription initiation factor TFIID subunit 6 [Pteropus alecto]
Length = 652
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/338 (38%), Positives = 186/338 (55%), Gaps = 62/338 (18%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI--------------- 96
I PLPR PLD + HWL+IEG QP IPEN P +A
Sbjct: 118 INTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGP 177
Query: 97 -------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
AAP+ G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 178 LKGKGQGAAPAEGKGKEKKAPPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEA 237
Query: 145 VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIE 204
K+A+ V+ NN +LL LMR+V L+ NP + +E
Sbjct: 238 ---KRAV----------------------RVNVVQNNLALLIYLMRMVKALMDNPTLYLE 272
Query: 205 PYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKT 263
Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TKT
Sbjct: 273 KYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKT 332
Query: 264 LLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
+ +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 333 FTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 370
>gi|336264219|ref|XP_003346888.1| hypothetical protein SMAC_05148 [Sordaria macrospora k-hell]
gi|380090359|emb|CCC11935.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 516
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 209/370 (56%), Gaps = 48/370 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR + RTTLT DV +AL++ +VEP+YG+ S PLR+ A IG + LFY++D++V+F+
Sbjct: 53 MRAANRTTLTVQDVSQALRVLDVEPLYGYDSTRPLRYGEASIGPGQPLFYIEDEEVDFEK 112
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLP------ 112
VI APLP+ P D S HWLAI+GVQP IP+N P+ G + KD LP
Sbjct: 113 VINAPLPKVPRDMSFTAHWLAIDGVQPSIPQN--------PTTGETS-SKDLLPKGPGAN 163
Query: 113 -----------VEIKLPVKHILSRELQLYFDKITELAVSRSD-----SVLFKQALVSLAT 156
V + VKH++S+EL LYFDK+ + A+ D + L AL S+ +
Sbjct: 164 PAVAALAGNDNVAFRPAVKHVISKELILYFDKV-QAAILDDDPDEEKTRLRSAALDSVRS 222
Query: 157 DSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 216
D GLH LVPYF F+ ++V+ L++ +L +M + +L+NP I ++PY L V+T
Sbjct: 223 DPGLHQLVPYFVSFINNQVTHRLDDLFVLRQMMELTGAILENPSIFLDPYASSLAAPVLT 282
Query: 217 CLVAKRLGNRLAD--------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
CL+A++LG + + + LR+ A L+ I ++Y L+ +LT+T L
Sbjct: 283 CLMARKLGGSESSLEGTDALKDQYRLREVAASLLGTIARKYSKTNALLRPKLTRTCLKFF 342
Query: 269 LDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNLGPY-LSLLEPEMLLEKQKNEVKRHEA 326
LDP ++ YGA+ GLAA GP VR+L+LPNL + +L P ++K E E
Sbjct: 343 LDPSKSPAVLYGAISGLAAAGGPEAVRILVLPNLRMFDEGILTP----LREKGEASHFEY 398
Query: 327 WRVYGALLQA 336
+ G +++A
Sbjct: 399 EALVGGIMKA 408
>gi|403285900|ref|XP_003934248.1| PREDICTED: transcription initiation factor TFIID subunit 6 isoform
4 [Saimiri boliviensis boliviensis]
Length = 602
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 194/321 (60%), Gaps = 21/321 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 1 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 60
Query: 60 IEAPLPRAPLDTSIVC--------HWLAIEGVQPVIPENAPVQAI---AAPSNGTNNEQK 108
I PLPR PLD + ++ +P E+ P++ AA ++ E+K
Sbjct: 61 INTPLPRVPLDVCLKAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAATADSKGKEKK 120
Query: 109 -----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPL 163
+G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ +
Sbjct: 121 APPLLEGGPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR-AEALQSIATDPGLYQM 179
Query: 164 VPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 221
+P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V++
Sbjct: 180 LPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSR 239
Query: 222 RLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 280
+L R DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG
Sbjct: 240 QLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYG 299
Query: 281 AVQGLAALGPNVVRLLLLPNL 301
++ GLA LG +V++ L+LP L
Sbjct: 300 SIAGLAELGHDVIKTLILPRL 320
>gi|45198499|ref|NP_985528.1| AFL020Wp [Ashbya gossypii ATCC 10895]
gi|44984450|gb|AAS53352.1| AFL020Wp [Ashbya gossypii ATCC 10895]
Length = 504
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 193/343 (56%), Gaps = 48/343 (13%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGP----LRFRRAIGY--RDLFYLDDKDVE 55
RHS+R LTTDD+ AL++ NVEP+YG+ + + + G + ++Y++D++V+
Sbjct: 62 RHSKRDVLTTDDIARALRVLNVEPLYGYEDNSTRDKEVSYSKVTGQGGQTMYYVNDEEVD 121
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQ------------AIAAPSNGT 103
F +I PLP P + HWLA+EGVQP IP+N + AI N T
Sbjct: 122 FDKLINEPLPHVPRLPTFTTHWLAVEGVQPAIPQNPNLNELRMTQLPLTRGAIVTALNDT 181
Query: 104 N-------------NEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ- 149
+ ++ K G E+K VKH+LS+ELQ+YFDK+ A++ D L Q
Sbjct: 182 SIQTSVSEEKAEHVSQVKPGQTNEVKPLVKHVLSKELQIYFDKVVG-ALTSKDQTLNAQH 240
Query: 150 ----ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEP 205
AL SL +D+GLH LVPYF F+A++++ L++ LL ++ ++++LL N + ++P
Sbjct: 241 MKVAALTSLKSDTGLHQLVPYFIQFIAEQITHNLSDLDLLTTMLEMIYSLLSNQSVFLDP 300
Query: 206 YLHQLMPSVVTCLVAKRLGNR-----------LADNHWELRDFTAKLVAAICKRYGHVYN 254
Y+H LMPS++T L+AK+LG + LRDF++ L+ + +++ VY
Sbjct: 301 YIHSLMPSILTLLLAKKLGGSPSSTLPEDEQDFLEKTIALRDFSSTLLDHVLQKFPQVYK 360
Query: 255 TLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+L+ R+T+TLL LD R+ +YG ++G+ LG +R L
Sbjct: 361 SLKPRVTRTLLKTFLDSNRSFGTYYGCIRGVCILGNETIRFFL 403
>gi|365990257|ref|XP_003671958.1| hypothetical protein NDAI_0I01460 [Naumovozyma dairenensis CBS 421]
gi|343770732|emb|CCD26715.1| hypothetical protein NDAI_0I01460 [Naumovozyma dairenensis CBS 421]
Length = 517
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 193/352 (54%), Gaps = 56/352 (15%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGP----LRFRR-AIGYRDLFYLDDKDVEF 56
RHS+R LTTDDV +AL+ NVEP+YG+ G + F + G + ++YL+D++V+
Sbjct: 57 RHSKRDMLTTDDVAKALRALNVEPLYGYHDGSAENKNVSFGKVTTGGQSIYYLNDEEVDL 116
Query: 57 KDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAP----------------- 99
+I PLP+ P + HWLA+EGVQP I EN + I A
Sbjct: 117 DKLINEPLPQVPRVPTFTAHWLAVEGVQPAIIENPNLNDIRASQPPFVRGAIVTALNDTS 176
Query: 100 --SNGTNNEQ----------------KDGLPVEIKLPVKHILSRELQLYFDKITELAVSR 141
++ T+NE K G E+K VKH+LS+ELQ+YF+K+ ++
Sbjct: 177 LQTSTTSNESAMIVSENKESDHFSIVKPGQNTEVKPLVKHVLSKELQIYFNKVIAALITT 236
Query: 142 S----DSVLFKQA-LVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLL 196
D+ K A L SL TDSGLH LVPYF F+A++++ L+N LL ++ ++++LL
Sbjct: 237 DTENPDAQYMKTAALTSLRTDSGLHQLVPYFIQFIAEQITHNLSNLELLTTILEMIYSLL 296
Query: 197 QNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAI 245
N I ++PY+H LMPS++T L+AK+LG L + E LRDF A L+ +
Sbjct: 297 SNTSIFLDPYIHSLMPSILTLLLAKKLGGTLTHDTPEELHESLERTNALRDFAASLLDYV 356
Query: 246 CKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
K++ +Y +L+ R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 357 LKKFPQIYKSLKPRITRTLLKTFLDTNRVFGTYYGCLRGISVLESESIRFFL 408
>gi|367008420|ref|XP_003678710.1| hypothetical protein TDEL_0A01670 [Torulaspora delbrueckii]
gi|359746367|emb|CCE89499.1| hypothetical protein TDEL_0A01670 [Torulaspora delbrueckii]
Length = 506
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 195/350 (55%), Gaps = 54/350 (15%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPL----RFRR--AIGYRDLFYLDDKDVE 55
RHS+R LTTDD+ +AL++ NVEP+YG+ G + F R A G + ++YLDD++V+
Sbjct: 57 RHSKRDALTTDDISKALRVLNVEPLYGYHDGSAIDKDVTFSRVNAAGGQTVYYLDDEEVD 116
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN------------------------A 91
F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 117 FDKLINEPLPQVPRLPTFSTHWLAVEGVQPAIIQNPNLNDIRISQPPIVRGAIVTALNDN 176
Query: 92 PVQAIAAPSNGTNNEQ--------KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSD 143
+Q +A + + E+ K G +E+K VKH+LS+ELQ+YF+K+ S++
Sbjct: 177 SLQTSSAAAISLSEEKHAQHLSTVKPGQNIEVKPLVKHVLSKELQVYFNKVISALTSKNG 236
Query: 144 SVLFKQ-----ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQN 198
+ Q AL SL TDSGLH LVPYF F+A++++ L++ LL ++ ++++LL N
Sbjct: 237 NDENGQHMKAAALTSLKTDSGLHQLVPYFIQFIAEQITHNLSDLELLTTILEMIYSLLSN 296
Query: 199 PHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAICK 247
I ++PY+H LMPS++T L+AK+LG + + E LRDF A L+ + K
Sbjct: 297 ESIFLDPYIHSLMPSILTLLLAKKLGGSPSSDSPEDVSAFLERTNALRDFAASLLDYVLK 356
Query: 248 RYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
++ VY +L+ R+T+TLL LD R +YG ++G++ +R L
Sbjct: 357 KFPQVYKSLKPRVTRTLLKTFLDTNRVFGTYYGCLRGVSMFESEFIRFFL 406
>gi|307185548|gb|EFN71510.1| Transcription initiation factor TFIID subunit 6 [Camponotus
floridanus]
Length = 636
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 193/334 (57%), Gaps = 34/334 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MRH +R +TT D+D ALK++N+EP YGF + + FR A G R+L ++++K+++ ++
Sbjct: 56 MRHGKRQRMTTHDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEI 115
Query: 60 IE----APLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----VQAIAA--PSNGTNNEQK 108
+ P+ PL+ ++ HWL I+GVQP +PEN P VQ + + P+ +++ +
Sbjct: 116 VSMAGGQTWPKLPLEITLRAHWLCIDGVQPTVPENPPPVSKDVQKLESVDPTTKLSSKNQ 175
Query: 109 DGL-----------------PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQAL 151
+ + +K H LS E QLY+ +ITE V SD +AL
Sbjct: 176 NIGIGKPGGGGKSQKLRNVETIHVKQLATHELSVEQQLYYKEITEACVG-SDEGRRAEAL 234
Query: 152 VSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 209
SL+ D GLH ++ F+A+ V + N+ +LL LMR+V LL NP + +E YLH+
Sbjct: 235 QSLSADPGLHEMLARMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEKYLHE 294
Query: 210 LMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
L+PSV TC+V+++L R DNHW LRDF ++L+A ICK + N +QTR+T+ AL
Sbjct: 295 LIPSVATCIVSRQLCMRPDVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQAL 354
Query: 269 LDPKRA-LTQHYGAVQGLAALGPNVVRLLLLPNL 301
+ L YGA++GL LGP V++ L++P +
Sbjct: 355 AKNNQTPLASLYGAIEGLCELGPEVIKALVIPKI 388
>gi|363749243|ref|XP_003644839.1| hypothetical protein Ecym_2276 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888472|gb|AET38022.1| Hypothetical protein Ecym_2276 [Eremothecium cymbalariae
DBVPG#7215]
Length = 504
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 191/343 (55%), Gaps = 48/343 (13%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGP----LRFRRAIGY--RDLFYLDDKDVE 55
RHS+R LTTDD+ AL++ NVEP+YG+ + F + G + ++YLDD++++
Sbjct: 62 RHSKRDVLTTDDIARALRVLNVEPLYGYEDNSTRDKEVSFSKVTGQGGQTMYYLDDEEID 121
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQ------------AIAAPSNGT 103
F +I PLP P + HWLA+EGVQP IP+N + AI N T
Sbjct: 122 FDKLINEPLPHVPRLPTFTTHWLAVEGVQPAIPQNPNLNDLRMTQLPLTRGAIVTALNDT 181
Query: 104 N-------------NEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ- 149
+ ++ K G E K VKH+LS+ELQ+YF+K+ A++ D L Q
Sbjct: 182 SIQTSVSEEKSEHVSQVKPGQTNETKPLVKHVLSKELQIYFNKVVS-ALTSKDQNLNAQH 240
Query: 150 ----ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEP 205
AL SL +D+GLH L+PYF F+A++++ L++ LL ++ ++++LL + ++P
Sbjct: 241 MKAAALTSLKSDTGLHQLIPYFIQFIAEQITHNLSDLDLLTTMLEMIYSLLSKQSVFLDP 300
Query: 206 YLHQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAICKRYGHVYN 254
Y+H LMPS++T L+AK+LG + E LRDF + L+ + +++ VY
Sbjct: 301 YIHSLMPSILTLLLAKKLGGAPSSTSSEDEQDFLEKTNALRDFASTLLDHVLQKFPQVYK 360
Query: 255 TLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+L+ R+T+TLL LD R+ +YG ++G+ LG +R L
Sbjct: 361 SLKPRVTRTLLKTFLDSNRSFGTYYGCIRGVCVLGNETIRFFL 403
>gi|367024929|ref|XP_003661749.1| TAF6-like protein [Myceliophthora thermophila ATCC 42464]
gi|347009017|gb|AEO56504.1| TAF6-like protein [Myceliophthora thermophila ATCC 42464]
Length = 468
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/361 (37%), Positives = 210/361 (58%), Gaps = 30/361 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR + RTTLT DV ALK+ +VEP+YG+ S PLR+ A +G + LFY+DD++V+F+
Sbjct: 54 MRAANRTTLTVQDVSLALKVLDVEPLYGYESTRPLRYGEASLGPGQPLFYIDDEEVDFEK 113
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA----PSNGTNNEQKDGLP-- 112
VI APLP+ P D S HWLAIEGVQP IP+N ++ P N L
Sbjct: 114 VINAPLPKVPRDMSFTAHWLAIEGVQPSIPQNPTTAETSSKELLPKGPGANPALAALAGN 173
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSD-----SVLFKQALVSLATDSGLHPLVP 165
V + VKH++S+EL LYFDKI + A+ D + L + AL S+ +DSGLH L+P
Sbjct: 174 DNVSFRPSVKHVISKELILYFDKI-QAAILDDDPDEEKTRLREAALESVRSDSGLHQLLP 232
Query: 166 YFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN 225
YF F+ ++V+ L++ +L +M + ++QNP++ ++PY L ++TCL+++RLG
Sbjct: 233 YFVNFITNQVTHHLDDLFILRQMMELAEAVIQNPNLFLDPYASALSAPILTCLMSRRLGG 292
Query: 226 RLADN--------HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQ 277
+ + + LR+ A L+ + ++YG L+ +LT+T L LDP R
Sbjct: 293 AASADEGSDTLREQYSLRELAASLLEMVARKYGATNALLRPKLTRTCLKHFLDPTRPPAV 352
Query: 278 HYGAVQGLAAL-GPNVVRLLLLPNLGPY-LSLLEPEMLLEKQKNEVKRHEAWRVYGALLQ 335
+GA++G+AA GP VR+L+LP+L + ++L+P +K E E + G +++
Sbjct: 353 LFGAIRGVAASGGPEAVRVLVLPSLKSFDGAVLQP----LSEKGEAHAMELEMLVGGIMK 408
Query: 336 A 336
A
Sbjct: 409 A 409
>gi|85090715|ref|XP_958550.1| hypothetical protein NCU07757 [Neurospora crassa OR74A]
gi|28919921|gb|EAA29314.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 465
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/361 (37%), Positives = 205/361 (56%), Gaps = 30/361 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR + RTTLT DV +AL++ +VEP+YG+ S PLR+ A IG + LFY++D++V+F+
Sbjct: 53 MRAANRTTLTVQDVSQALRVLDVEPLYGYDSTRPLRYGEASIGPGQPLFYIEDEEVDFEK 112
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA----PSNGTNNEQKDGLP-- 112
VI APLP+ P D S HWLAI+GVQP IP+N ++ P N L
Sbjct: 113 VINAPLPKVPRDMSFTAHWLAIDGVQPSIPQNPTTAETSSKDLLPKGPGANPAVAALAGN 172
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSD-----SVLFKQALVSLATDSGLHPLVP 165
V + VKH++S+EL LYFDK+ + A+ D + L AL S+ +D GLH LVP
Sbjct: 173 DNVAFRPAVKHVISKELILYFDKV-QAAIMDDDPDEEKTRLRSAALDSVRSDPGLHQLVP 231
Query: 166 YFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN 225
YF F+ ++V+ L++ +L +M + +L NP I ++PY L V+TCL+A++LG
Sbjct: 232 YFVSFINNQVTHRLDDLFVLRQMMELTGAILDNPSIFLDPYASSLAAPVLTCLMARKLGG 291
Query: 226 RLAD--------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQ 277
+ + + LR+ A L+ I ++Y L+ +LT+T L LDP ++
Sbjct: 292 SESSLEGTDALKDQYRLREVAASLLGTIARKYSKTNALLRPKLTRTCLKFFLDPSKSPAV 351
Query: 278 HYGAVQGLAAL-GPNVVRLLLLPNLGPY-LSLLEPEMLLEKQKNEVKRHEAWRVYGALLQ 335
YGA+ GLAA GP VR+L+LPNL + +L P ++K E E + G +++
Sbjct: 352 LYGAISGLAAAGGPEAVRILVLPNLKMFDEGILTP----LREKGEASHFEYEALVGGIMK 407
Query: 336 A 336
A
Sbjct: 408 A 408
>gi|323355096|gb|EGA86926.1| Taf6p [Saccharomyces cerevisiae VL3]
Length = 516
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 198/353 (56%), Gaps = 57/353 (16%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVE 55
RHS+R LTTDDV +AL++ NVEP+YG+ G + F + G + ++YLD+++V+
Sbjct: 57 RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVD 116
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN------------------------- 90
F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 117 FDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDN 176
Query: 91 ---APVQAIAAPSNGTN-------NEQKDGLPVEIKLPVKHILSRELQLYFDKI--TELA 138
PV + A ++ T+ + K G E+K VKH+LS+ELQ+YF+K+ T A
Sbjct: 177 SLQTPVTSTTASASVTDTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTA 236
Query: 139 VSRSDSV---LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 195
S++D + + AL SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++L
Sbjct: 237 KSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSL 296
Query: 196 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAA 244
L N I ++PY+H LMPS++T L+AK+LG D+ + LRDF A L+
Sbjct: 297 LSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDY 356
Query: 245 ICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+ K++ Y +L+ R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 357 VLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|332018695|gb|EGI59267.1| Transcription initiation factor TFIID subunit 6 [Acromyrmex
echinatior]
Length = 642
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 187/334 (55%), Gaps = 34/334 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MRH +R +T D+D ALK++N+EP YGF + + FR A G R+L ++++K+++ ++
Sbjct: 56 MRHGKRQRMTAHDIDHALKIKNIEPTYGFFAKDHIPFRFASGGGRELHFVEEKEIDLNEI 115
Query: 60 IEA----PLPRAPLDTSIVCHWLAIEGVQPVIPENAP----------------------- 92
+ P+ PL+ ++ HWL I+GVQP IPEN P
Sbjct: 116 VATAGGQSWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKDAQKLESVDPTIKLSSKNQ 175
Query: 93 -VQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQAL 151
+ G + + ++ V +K H LS E QLY+ +ITE V SD +AL
Sbjct: 176 NIGVGKPGGGGKSQKLRNIETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEAL 234
Query: 152 VSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 209
SL+ D GLH ++ F+A+ V + N+ +LL LMR+V LL NP + +E YLH+
Sbjct: 235 QSLSADPGLHEMLARMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEKYLHE 294
Query: 210 LMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
L+PSV TC+V+++L R DNHW LRDF ++L+A ICK + N +QTR+T+ AL
Sbjct: 295 LIPSVATCIVSRQLCMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQAL 354
Query: 269 LDPKRA-LTQHYGAVQGLAALGPNVVRLLLLPNL 301
+ L YGA++GL LGP V++ L++P +
Sbjct: 355 AKNNQTPLASLYGAIEGLCELGPEVIKALVIPKI 388
>gi|6321326|ref|NP_011403.1| Taf6p [Saccharomyces cerevisiae S288c]
gi|1729811|sp|P53040.1|TAF6_YEAST RecName: Full=Transcription initiation factor TFIID subunit 6;
AltName: Full=TBP-associated factor 6; AltName:
Full=TBP-associated factor 60 kDa; Short=TAFII-60;
Short=TAFII60
gi|840662|gb|AAA83389.1| TAF60 [Saccharomyces cerevisiae]
gi|1310712|emb|CAA66240.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1322661|emb|CAA96819.1| TAF60 [Saccharomyces cerevisiae]
gi|51830327|gb|AAU09726.1| YGL112C [Saccharomyces cerevisiae]
gi|285812096|tpg|DAA07996.1| TPA: Taf6p [Saccharomyces cerevisiae S288c]
gi|323305004|gb|EGA58758.1| Taf6p [Saccharomyces cerevisiae FostersB]
gi|392299151|gb|EIW10245.1| Taf6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 516
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 198/353 (56%), Gaps = 57/353 (16%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVE 55
RHS+R LTTDDV +AL++ NVEP+YG+ G + F + G + ++YLD+++V+
Sbjct: 57 RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVD 116
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN------------------------- 90
F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 117 FDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDN 176
Query: 91 ---APVQAIAAPSNGTN-------NEQKDGLPVEIKLPVKHILSRELQLYFDKI--TELA 138
PV + A ++ T+ + K G E+K VKH+LS+ELQ+YF+K+ T A
Sbjct: 177 SLQTPVTSTTASASVTDTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTA 236
Query: 139 VSRSDSV---LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 195
S++D + + AL SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++L
Sbjct: 237 KSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSL 296
Query: 196 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAA 244
L N I ++PY+H LMPS++T L+AK+LG D+ + LRDF A L+
Sbjct: 297 LSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDY 356
Query: 245 ICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+ K++ Y +L+ R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 357 VLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|151943698|gb|EDN62008.1| TATA-binding protein-associated-factor [Saccharomyces cerevisiae
YJM789]
gi|190407066|gb|EDV10333.1| transcription initiation factor TFIID subunit 6 [Saccharomyces
cerevisiae RM11-1a]
gi|259146397|emb|CAY79654.1| Taf6p [Saccharomyces cerevisiae EC1118]
gi|365765821|gb|EHN07327.1| Taf6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 516
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 198/353 (56%), Gaps = 57/353 (16%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVE 55
RHS+R LTTDDV +AL++ NVEP+YG+ G + F + G + ++YLD+++V+
Sbjct: 57 RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVD 116
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN------------------------- 90
F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 117 FDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDN 176
Query: 91 ---APVQAIAAPSNGTN-------NEQKDGLPVEIKLPVKHILSRELQLYFDKI--TELA 138
PV + A ++ T+ + K G E+K VKH+LS+ELQ+YF+K+ T A
Sbjct: 177 SLQTPVTSTTASASVTDTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTA 236
Query: 139 VSRSDSV---LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 195
S++D + + AL SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++L
Sbjct: 237 KSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSL 296
Query: 196 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAA 244
L N I ++PY+H LMPS++T L+AK+LG D+ + LRDF A L+
Sbjct: 297 LSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDY 356
Query: 245 ICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+ K++ Y +L+ R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 357 VLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|322778974|gb|EFZ09385.1| hypothetical protein SINV_14157 [Solenopsis invicta]
Length = 606
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 193/334 (57%), Gaps = 34/334 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MRH +R +T D+D +LK++N+EP YGF + + FR A G R+L ++++K+++ +V
Sbjct: 12 MRHGKRQRMTAHDIDHSLKIKNIEPTYGFFAKDYIPFRFASGGGRELHFVEEKEIDLNEV 71
Query: 60 IEAP----LPRAPLDTSIVCHWLAIEGVQPVIPENAP-----VQAIAA--PSNGTNNEQK 108
+ P+ PL+ ++ HWL I+GVQP IPEN P VQ + + P+ +++ +
Sbjct: 72 VATAGGQSWPKLPLEITLRAHWLCIDGVQPTIPENPPPVSKEVQKLESVDPTTKLSSKNQ 131
Query: 109 DGL-----------------PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQAL 151
+ V +K H LS E QLY+ +ITE V SD +AL
Sbjct: 132 NIGVGKPGGGGKSQKLRNVETVHVKQLATHELSVEQQLYYKEITEACVG-SDEARRAEAL 190
Query: 152 VSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 209
SL+ D GLH ++ F+A+ V + N+ +LL LMR+V LL NP + +E YLH+
Sbjct: 191 QSLSADPGLHEMLARMCTFIAEGVRVNVVQNHLALLIYLMRMVKALLDNPSLYLEKYLHE 250
Query: 210 LMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
L+PSV TC+V+++L R DNHW LRDF ++L+A ICK + N +QTR+T+ AL
Sbjct: 251 LIPSVATCIVSRQLCMRPEVDNHWALRDFASRLMAQICKNFNTSTNNVQTRVTRMFSQAL 310
Query: 269 L-DPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
+ + L YGA++GL LGP V++ L++P +
Sbjct: 311 AKNSQTPLASLYGAIEGLCELGPEVIKALVIPKI 344
>gi|323348637|gb|EGA82880.1| Taf6p [Saccharomyces cerevisiae Lalvin QA23]
Length = 498
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 198/353 (56%), Gaps = 57/353 (16%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVE 55
RHS+R LTTDDV +AL++ NVEP+YG+ G + F + G + ++YLD+++V+
Sbjct: 39 RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVD 98
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN------------------------- 90
F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 99 FDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDN 158
Query: 91 ---APVQAIAAPSNGTN-------NEQKDGLPVEIKLPVKHILSRELQLYFDKI--TELA 138
PV + A ++ T+ + K G E+K VKH+LS+ELQ+YF+K+ T A
Sbjct: 159 SLQTPVTSTTASASVTDTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTA 218
Query: 139 VSRSDSV---LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 195
S++D + + AL SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++L
Sbjct: 219 KSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSL 278
Query: 196 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAA 244
L N I ++PY+H LMPS++T L+AK+LG D+ + LRDF A L+
Sbjct: 279 LSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDY 338
Query: 245 ICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+ K++ Y +L+ R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 339 VLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 391
>gi|326426737|gb|EGD72307.1| hypothetical protein PTSG_00325 [Salpingoeca sp. ATCC 50818]
Length = 583
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/312 (40%), Positives = 187/312 (59%), Gaps = 19/312 (6%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASG---GPLR--FRRAIGYRDLFYLDDKDVEF 56
RH RR +TTDD++ A+++RN+EPVYG+ SG G + F+RA D+FY+ D
Sbjct: 49 RHGRRRRMTTDDINAAMRVRNMEPVYGYPSGSHTGTVESLFKRA-KESDVFYIPDTVKRV 107
Query: 57 KDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI--AAPSNGTNNEQK-----D 109
++I APLP P + + HWLAIEG QP IP+N PV A P G K +
Sbjct: 108 HEIIGAPLPSMPAEMTFTSHWLAIEGEQPTIPQNPPVHTTHTAEPEEGQEPAAKAPKLKE 167
Query: 110 GLP---VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPY 166
G P VEIK KH LSRE QL F+ I + + +D + AL +L+TD GLH LVP+
Sbjct: 168 GKPREEVEIKQLEKHTLSREQQLLFNYIIKDLLG-ADKTAKQAALKTLSTDHGLHQLVPF 226
Query: 167 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 226
F F+ + + ++ + + +++ +V L+QN ++ +EPYLH ++P V TC V+K+L +
Sbjct: 227 FMEFIRSQTTEHASDPNAIASVVGMVDALVQNNNVYLEPYLHHVIPVVATCAVSKKLAS- 285
Query: 227 LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLA 286
A +H LR A++ +IC +YG Y+ LQ R+ K + +L +R+L +YGA++GLA
Sbjct: 286 YAPDHLALRVRAAQVAVSICVKYGTKYHDLQPRILKVFQD-VLKRRRSLLSYYGAIKGLA 344
Query: 287 ALGPNVVRLLLL 298
A GP VV L L+
Sbjct: 345 AFGPRVVDLYLV 356
>gi|256273204|gb|EEU08151.1| Taf6p [Saccharomyces cerevisiae JAY291]
Length = 516
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 198/353 (56%), Gaps = 57/353 (16%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVE 55
RHS+R LTTDDV +AL++ NVEP+YG+ G + F + G + ++YLD+++V+
Sbjct: 57 RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVD 116
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN------------------------- 90
F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 117 FDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDN 176
Query: 91 ---APVQAIAAPSNGTN-------NEQKDGLPVEIKLPVKHILSRELQLYFDKI--TELA 138
PV + A ++ T+ + K G E+K VKH+LS+ELQ+YF+K+ T A
Sbjct: 177 SLQTPVTSTTASASLTDTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTA 236
Query: 139 VSRSDSV---LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 195
S++D + + AL SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++L
Sbjct: 237 KSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSL 296
Query: 196 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAA 244
L N I ++PY+H LMPS++T L+AK+LG D+ + LRDF A L+
Sbjct: 297 LSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDY 356
Query: 245 ICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+ K++ Y +L+ R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 357 VLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|323337577|gb|EGA78822.1| Taf6p [Saccharomyces cerevisiae Vin13]
Length = 523
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 198/353 (56%), Gaps = 57/353 (16%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVE 55
RHS+R LTTDDV +AL++ NVEP+YG+ G + F + G + ++YLD+++V+
Sbjct: 57 RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVD 116
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN------------------------- 90
F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 117 FDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDN 176
Query: 91 ---APVQAIAAPSNGTN-------NEQKDGLPVEIKLPVKHILSRELQLYFDKI--TELA 138
PV + A ++ T+ + K G E+K VKH+LS+ELQ+YF+K+ T A
Sbjct: 177 SLQTPVTSTTASASVTDTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTA 236
Query: 139 VSRSDSV---LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 195
S++D + + AL SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++L
Sbjct: 237 KSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSL 296
Query: 196 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAA 244
L N I ++PY+H LMPS++T L+AK+LG D+ + LRDF A L+
Sbjct: 297 LSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDY 356
Query: 245 ICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+ K++ Y +L+ R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 357 VLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|349578116|dbj|GAA23282.1| K7_Taf6p, partial [Saccharomyces cerevisiae Kyokai no. 7]
Length = 478
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 198/353 (56%), Gaps = 57/353 (16%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVE 55
RHS+R LTTDDV +AL++ NVEP+YG+ G + F + G + ++YLD+++V+
Sbjct: 19 RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVD 78
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN------------------------- 90
F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 79 FDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDN 138
Query: 91 ---APVQAIAAPSNGTN-------NEQKDGLPVEIKLPVKHILSRELQLYFDKI--TELA 138
PV + A ++ T+ + K G E+K VKH+LS+ELQ+YF+K+ T A
Sbjct: 139 SLQTPVTSTTASASVTDTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTA 198
Query: 139 VSRSDSV---LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 195
S++D + + AL SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++L
Sbjct: 199 KSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSL 258
Query: 196 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAA 244
L N I ++PY+H LMPS++T L+AK+LG D+ + LRDF A L+
Sbjct: 259 LSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDY 318
Query: 245 ICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+ K++ Y +L+ R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 319 VLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 371
>gi|336473445|gb|EGO61605.1| hypothetical protein NEUTE1DRAFT_128140 [Neurospora tetrasperma
FGSC 2508]
gi|350293266|gb|EGZ74351.1| DUF1546-domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 536
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/361 (37%), Positives = 205/361 (56%), Gaps = 30/361 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR + RTTLT DV +AL++ +VEP+YG+ S PLR+ A IG + LFY++D++V+F+
Sbjct: 124 MRAANRTTLTVQDVSQALRVLDVEPLYGYDSTRPLRYGEASIGPGQPLFYIEDEEVDFEK 183
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA----PSNGTNNEQKDGLP-- 112
VI APLP+ P D S HWLAI+GVQP IP+N ++ P N L
Sbjct: 184 VINAPLPKVPRDMSFTAHWLAIDGVQPSIPQNPTTAETSSKDLLPKGPGANPAVAALAGN 243
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSD-----SVLFKQALVSLATDSGLHPLVP 165
V + VKH++S+EL LYFDK+ + A+ D + L AL S+ +D GLH LVP
Sbjct: 244 DNVAFRPAVKHVISKELILYFDKV-QAAIMDDDPDEEKTRLRSAALDSVRSDPGLHQLVP 302
Query: 166 YFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN 225
YF F+ ++V+ L++ +L +M + +L NP I ++PY L V+TCL+A++LG
Sbjct: 303 YFVSFINNQVTHRLDDLFVLRQMMELTGAILDNPSIFLDPYASSLAAPVLTCLMARKLGG 362
Query: 226 RLAD--------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQ 277
+ + + LR+ A L+ I ++Y L+ +LT+T L LDP ++
Sbjct: 363 SESSLEGTDALKDQYRLREVAASLLGTIARKYSKTNALLRPKLTRTCLKFFLDPSKSPAV 422
Query: 278 HYGAVQGLAAL-GPNVVRLLLLPNLGPY-LSLLEPEMLLEKQKNEVKRHEAWRVYGALLQ 335
YGA+ GLAA GP VR+L+LPNL + +L P ++K E E + G +++
Sbjct: 423 LYGAISGLAAAGGPEAVRILVLPNLKMFDEGILTP----LREKGEASHFEYEALVGGIMK 478
Query: 336 A 336
A
Sbjct: 479 A 479
>gi|167391320|ref|XP_001739722.1| transcription initiation factor tfiid [Entamoeba dispar SAW760]
gi|165896481|gb|EDR23886.1| transcription initiation factor tfiid, putative [Entamoeba dispar
SAW760]
Length = 433
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 172/300 (57%), Gaps = 10/300 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+R LT D++ ALKL+ +EP YG+ S PL ++R ++F ++ + ++I
Sbjct: 50 MRHSKRKMLTIQDINSALKLKKLEPYYGYNSSIPLYYQRLPSNHEMFVRQEQSIGLNEII 109
Query: 61 EAPL-PRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
P P D ++ CHWL +EGVQP+IP+N PS +QK +E K +
Sbjct: 110 HCQFFPDIPRDINVGCHWLTVEGVQPLIPQN--------PSVVVQEKQKQEETIETKPII 161
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
+H LS+ELQ+Y+D + E+ ++ ++ + L S+ TDSGL L PYF ++++ L
Sbjct: 162 QHSLSKELQMYYDMVVEI-LNTNNKEKIDECLDSVRTDSGLQQLTPYFIRYISNHTLANL 220
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
+ +L ++ +V + +N +I +EPYLHQL P ++T +V K++G DNHW +R A
Sbjct: 221 GSLEILANMLSLVNAMRENQNINLEPYLHQLFPIILTLVVTKQIGTNSYDNHWNIRVQAA 280
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
+V + RY Y L RL +T L A+ D + LT YG + G+ A+GP V LL+P
Sbjct: 281 AIVKKLRDRYSEKYGRLHARLLQTYLQAITDATKPLTTQYGGIVGITAMGPRAVYHLLVP 340
>gi|66805975|ref|XP_636709.1| TATA-binding protein-associated-factor [Dictyostelium discoideum
AX4]
gi|60465107|gb|EAL63207.1| TATA-binding protein-associated-factor [Dictyostelium discoideum
AX4]
Length = 542
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 158/227 (69%), Gaps = 2/227 (0%)
Query: 115 IKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADE 174
+K VKH+LS+E+Q++++KIT +V + LF AL SL +DS LH L+PYF F++ +
Sbjct: 243 VKPTVKHVLSKEIQMFYEKITN-SVKSDNQKLFDAALHSLKSDSSLHQLLPYFINFISVQ 301
Query: 175 VSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWEL 234
V++ L N LL LM++ +L++ H++ E YLHQLMPS++TCLV K+L N ++NHWEL
Sbjct: 302 VTQNLTNLELLNRLMKMAQAILESKHLKPELYLHQLMPSILTCLVGKKLCNSPSENHWEL 361
Query: 235 RDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVR 294
RDF A+LV+ +C+++G VY++LQ R+TKTL+ L D + LT HYGA+ GL+ LG NV++
Sbjct: 362 RDFAARLVSFVCRKFGDVYSSLQGRITKTLVQTLHDTTKPLTTHYGAIVGLSGLGRNVIQ 421
Query: 295 LLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCI 341
LLLP + Y LLEPE L N +K EA RV +++ A G+ +
Sbjct: 422 FLLLPYVPKYYKLLEPE-LNNNLSNPIKSMEANRVLNSIIDATGKFL 467
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 67/95 (70%), Gaps = 5/95 (5%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGP----LRFRRAIGY-RDLFYLDDKDVE 55
M+HS+R L+TDD++ AL LRN+E +YG++ L+F++ + +++L+DK++
Sbjct: 48 MKHSKRDHLSTDDINNALGLRNIEQLYGYSCSANDHSLLKFQKTTTTTQAIYFLNDKEMT 107
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN 90
F+++ PLP+ P D S+ HWLA+EGVQP+IP+N
Sbjct: 108 FQEIASQPLPKVPRDPSLSAHWLALEGVQPLIPQN 142
>gi|406866430|gb|EKD19470.1| transcription initiation factor TFIID complex 60 kDa subunit
[Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 459
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 194/343 (56%), Gaps = 32/343 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
M +RT L T D+ +ALK+ +VEP+YG+ S PLRF A +G + L+Y++D++V+F+
Sbjct: 52 MHQGKRTVLGTQDISQALKVLDVEPLYGYESTRPLRFGEASLGPGQPLYYIEDEEVDFEK 111
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-----APVQAIAAPSNGTN--------N 105
+I APLP+ P D S HWLA+EGVQP+IP+N A A A G N N
Sbjct: 112 LINAPLPKVPRDVSFTAHWLAVEGVQPLIPQNPSTAEARADASVAKGPGANPTLAALAGN 171
Query: 106 EQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLH 161
+ G P+ VKHI+S+E+ L+FDKI + S + VL + A S+ +D GL
Sbjct: 172 DNVPGKPL-----VKHIVSKEMILFFDKIKAAILDESLDPEVVLLRNTAFQSVRSDPGLA 226
Query: 162 PLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 221
LVPYF FVA++V+ L N +L ++ + +++N +PY L +VTC++ +
Sbjct: 227 QLVPYFLQFVAEKVTHSLGNLFVLRQMIELTQAVIENKSHYADPYALSLTAPIVTCIIGR 286
Query: 222 RLGNRLA--DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHY 279
LG A + +E+RD L+ + ++Y L+ +LT+T L LDP + L HY
Sbjct: 287 NLGGEAAHLKDQYEVRDLAVSLLGQVVRKYSTSSTMLKAKLTRTFLKNFLDPAKPLDVHY 346
Query: 280 GAVQGLAAL-GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEV 321
GA+ GLA + GPN + L+LP L Y E +L + +NE+
Sbjct: 347 GAMCGLATVGGPNAISALILPTLKKY-----DEEILSRAQNEL 384
>gi|401625786|gb|EJS43778.1| taf6p [Saccharomyces arboricola H-6]
Length = 516
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 199/355 (56%), Gaps = 61/355 (17%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI--------GYRDLFYLDDKD 53
RHS+R LTTDDV +AL++ NVEP+YG+ G + RA+ G + ++YLD+++
Sbjct: 57 RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVN--RAVSFSKVNTSGGQSVYYLDEEE 114
Query: 54 VEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN----------------------- 90
V+F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 115 VDFDKLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRISQPPFVRGAIVTALN 174
Query: 91 -----APVQAIAAPSNGTN-------NEQKDGLPVEIKLPVKHILSRELQLYFDKI--TE 136
P + AA ++ T+ + K G E+K VKH+LS+ELQ+YF+K+ T
Sbjct: 175 DNSLQTPATSSAANASVTDTSVSQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTL 234
Query: 137 LAVSRSDSVL--FKQA-LVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 193
A +++D + KQA L SL TDSGLH LVPYF F+A+++++ L++ LL ++ +++
Sbjct: 235 TAKNQNDESVQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIY 294
Query: 194 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-----------NRLADNHWELRDFTAKLV 242
+LL N I ++PY+H LMPS++T L+AK+LG + + LRDF A L+
Sbjct: 295 SLLSNSSIFLDPYIHSLMPSILTLLLAKKLGGSPKYDSPQEIHEFLERTNALRDFAASLL 354
Query: 243 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+ K++ Y +L+ R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 355 DYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|254565253|ref|XP_002489737.1| Subunit (60 kDa) of TFIID and SAGA complexes [Komagataella pastoris
GS115]
gi|238029533|emb|CAY67456.1| Subunit (60 kDa) of TFIID and SAGA complexes [Komagataella pastoris
GS115]
gi|328350154|emb|CCA36554.1| Transcription initiation factor TFIID subunit 6 [Komagataella
pastoris CBS 7435]
Length = 485
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 209/363 (57%), Gaps = 50/363 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI--GYRDLFYLDDKDVEFKD 58
MRH +R TL T D+D ALK+ N+EP+YG+ PL F+ A+ ++L+Y+DD +V+F+
Sbjct: 62 MRHGKRRTLHTSDIDRALKVLNLEPLYGYDVSRPLVFKEALVGAGQNLYYVDDDEVDFEK 121
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---------------------- 96
+I PLP+ P ++ HWLAIEGVQP IP+N I
Sbjct: 122 LINEPLPKVPRFSTFTAHWLAIEGVQPAIPQNPSPNDIKNILPINRGSMENMFSLINDEV 181
Query: 97 ----------AAPSNGTN-NEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS- 144
PS +N + QK GL E+K VKH+LSRELQLYFDKI E+ +++ ++
Sbjct: 182 KEDTNEEFTSTGPSVSSNISNQKQGL--EVKPLVKHVLSRELQLYFDKIVEVLLNQEETK 239
Query: 145 ---VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHI 201
+L AL S+ D GLH LVPYF F+++ +++ L N SLL ++ ++++LL N +
Sbjct: 240 EAELLRNSALQSVRADPGLHQLVPYFIQFISETITKNLKNISLLSTMLELIYSLLMNESL 299
Query: 202 QIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE------LRDFTAKLVAAICKRYGHVYNT 255
+EPY+H ++P ++T L+AK++GN D+ + LR+ +A L+ + + +G Y+T
Sbjct: 300 FLEPYVHAIIPCILTLLLAKKIGN--VDDELQKQQQLALRELSASLLERVIEDFGSSYST 357
Query: 256 LQTRLTKTLLNALLDPKRAL-TQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLL 314
L+ R+T+TLL A + YGA+ GL LG V+R+++L N+ + S ++
Sbjct: 358 LKPRITRTLLRAFVSVNNTTPGTQYGALLGLRGLGSEVIRIVVLGNVINWSSTFLEKLQQ 417
Query: 315 EKQ 317
E Q
Sbjct: 418 EDQ 420
>gi|365760774|gb|EHN02468.1| Taf6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 516
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 196/355 (55%), Gaps = 61/355 (17%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI--------GYRDLFYLDDKD 53
RHS+R LTTDDV +AL++ NVEP+YG+ G + RA+ G + ++YLD+++
Sbjct: 57 RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVN--RAVSFSKVNTSGGQSVYYLDEEE 114
Query: 54 VEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN----------------APVQAIA 97
V+F +I PLP+ P + HWLA+EGVQP I +N A V A+
Sbjct: 115 VDFDKLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALN 174
Query: 98 APS--------------NGTNNEQ-----KDGLPVEIKLPVKHILSRELQLYFDKITELA 138
S TN Q K G E+K VKH+LS+ELQ+YF+K+
Sbjct: 175 DNSFQTPASSSAANASVADTNASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVVSTL 234
Query: 139 VSRSDS-----VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 193
+++ + + + AL SL TDSGLH LVPYF F+A+++++ L++ LL ++ +++
Sbjct: 235 TAKNQTDENAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIY 294
Query: 194 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLV 242
+LL N I ++PY+H LMPS++T L+AK+LG D+ + LRDF A L+
Sbjct: 295 SLLSNSSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQETHEFLERTNALRDFAASLL 354
Query: 243 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+ K++ Y +L+ R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 355 DYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|367037809|ref|XP_003649285.1| TAF6-like protein [Thielavia terrestris NRRL 8126]
gi|346996546|gb|AEO62949.1| TAF6-like protein [Thielavia terrestris NRRL 8126]
Length = 468
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 196/334 (58%), Gaps = 25/334 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR + RTTLT DV AL++ VEP+YG+ S PLR+ A +G + LFY+DD++++F+
Sbjct: 54 MRAANRTTLTVQDVSLALRVLKVEPLYGYESTRPLRYGEASLGPGQPLFYIDDEEIDFEK 113
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA----PSNGTNNEQKDGLP-- 112
VI APLP+ P D S HWLA+EGVQP IP+N ++ P N L
Sbjct: 114 VINAPLPKVPRDMSFTAHWLAVEGVQPSIPQNPTTAETSSKDLLPKGPGANPALAALAGN 173
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSD-----SVLFKQALVSLATDSGLHPLVP 165
V + VKH++S+EL LYFDKI + A+ D + L + AL S+ +D GLH L+P
Sbjct: 174 DNVSFRPSVKHVISKELILYFDKI-QAAILDDDPDEEKTRLREAALESVRSDPGLHQLLP 232
Query: 166 YFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN 225
YF F+ ++V+ L++ +L +M + ++QNP + ++PY L V+TCL+A++LG
Sbjct: 233 YFVNFITNQVTHHLDDLFVLRQMMELAEAVIQNPSLFLDPYASALSAPVLTCLMARKLGG 292
Query: 226 RLAD-------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQH 278
D + LR+ A L+ I ++YG L+ +LT+T L LDP R
Sbjct: 293 AAPDEGGDALREQYRLRELAASLLEMIARKYGASNALLRPKLTRTCLKHFLDPTRPPAVL 352
Query: 279 YGAVQGLAAL-GPNVVRLLLLPNLGPY-LSLLEP 310
+GA++G+AA GP VR+L+LPNL + ++L+P
Sbjct: 353 FGAIRGVAASGGPEAVRILVLPNLKSFDAAVLQP 386
>gi|451854028|gb|EMD67321.1| hypothetical protein COCSADRAFT_34148 [Cochliobolus sativus ND90Pr]
Length = 476
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 202/364 (55%), Gaps = 49/364 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RTTL+T D+ ALK+ NVEP+YG+ S PLRF A +G + L+Y++D++V+F+
Sbjct: 49 MRHGKRTTLSTQDISNALKVLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEK 108
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENA--------PVQAIAAP----SNGTNNE 106
+I APLP+ P + + HWLA+EGVQP IP+N P A P +NG +N
Sbjct: 109 LINAPLPKVPREITFTAHWLAVEGVQPSIPQNPNTNTGDLLPKGPNANPHLAAANGLDN- 167
Query: 107 QKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPY 166
V +K VKH+LS+E Q F+K++ V ++ AL +++T+ G+H L Y
Sbjct: 168 ------VNVKPLVKHVLSKESQELFNKLSGALVDETNIEWQNAALAAISTEPGIHQLTTY 221
Query: 167 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-- 224
F+A++V+ + N +L +MR LL N I ++PY+ ++P ++TC + +LG
Sbjct: 222 LLSFIAEKVTHNMKNLFILSQMMRASEALLNNQAIYLDPYIAYMVPPILTCCIGGKLGPA 281
Query: 225 --------------------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTL 264
+R A + + LR A L+ IC++Y L++R+ +T
Sbjct: 282 NQPAPSNASSETLGGAVPDYSRAASDAFYLRTLAAHLLRNICRKYSSSNQGLKSRIARTC 341
Query: 265 LNALLDPKRALTQHYGAVQG-LAALGP-NVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVK 322
L +DP + + H+GA+Q L LGP + +R L+LPN+ Y + L +K +EV
Sbjct: 342 LKQFMDPDKTVGAHFGALQALLLVLGPSDALRGLILPNIKMY----SEDFLAKKLADEVT 397
Query: 323 RHEA 326
RH+A
Sbjct: 398 RHDA 401
>gi|340959744|gb|EGS20925.1| transcription initiation factor TFIID-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 480
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 211/378 (55%), Gaps = 38/378 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR + RTTLT DV AL++ +VEP+YG+ S PLR+ A +G + LFY+DD++V+F+
Sbjct: 54 MRAANRTTLTVQDVSLALRVLDVEPLYGYESTRPLRYGEASLGPGQPLFYIDDEEVDFEK 113
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA----PSNGTNNEQKDGLP-- 112
VI APLP+ P D + HWLA+EGVQP IP+N ++ P N L
Sbjct: 114 VINAPLPKVPRDMTFTAHWLAVEGVQPSIPQNPTTAETSSKDLLPKGPGANPALAALAGN 173
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAVSRSD-----SVLFKQALVSLATDSGLHPLVP 165
V + VKH++S+EL LYFDKI + A+ D L + AL S+ +D GLH L+P
Sbjct: 174 DNVSFRPSVKHVISKELILYFDKI-QAAILDDDPDEEKMRLRQAALESVRSDPGLHQLLP 232
Query: 166 YFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN 225
YF F+ ++V+ L++ +L +M + ++QNP + I+PY L V+TCL++++LG
Sbjct: 233 YFVNFITNQVTHHLDDLFILRQMMELAEAVVQNPTLFIDPYASALAAPVLTCLMSRKLGK 292
Query: 226 RLADN-----------------HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
+ N + LR+ A L++ I ++YG L+ +LT+T L
Sbjct: 293 NPSSNDEGALGAGNSIDSTLREQYSLRELAASLLSMIARKYGASNALLRPKLTRTCLKHF 352
Query: 269 LDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNLGPYLS-LLEPEMLLEKQKNEVKRHEA 326
LDP R +GA+ G+AA GP VR+L+LPNL + S +L+P L ++ V E
Sbjct: 353 LDPTRPPAVLFGAISGVAASGGPEAVRVLVLPNLKTFDSAVLQP---LREKAGPVAELEY 409
Query: 327 WRVYGALLQAAGQCIYDR 344
+ G +++A + D+
Sbjct: 410 EMLVGGIVKAVQSIVGDQ 427
>gi|330916461|ref|XP_003297422.1| hypothetical protein PTT_07833 [Pyrenophora teres f. teres 0-1]
gi|311329873|gb|EFQ94469.1| hypothetical protein PTT_07833 [Pyrenophora teres f. teres 0-1]
Length = 476
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/432 (32%), Positives = 228/432 (52%), Gaps = 53/432 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RTTL+T D+ ALK+ NVEP+YG+ S PLRF A +G + L+Y++D++V+F+
Sbjct: 49 MRHGKRTTLSTQDISNALKVLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEK 108
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE----QKDGLP-V 113
+I APLP+ P + + HWLA+EGVQP IP+N G N +GL V
Sbjct: 109 LINAPLPKVPREITFTAHWLAVEGVQPSIPQNPNTNTADLLPKGPNANPHLAAANGLDNV 168
Query: 114 EIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD 173
+K VKH+LS+E Q F+K++ + ++ AL +++T+ G+H L Y F+A+
Sbjct: 169 NVKPLVKHVLSKESQELFNKLSGALIDETNIEWQNAALAAISTEPGIHQLTTYLLSFIAE 228
Query: 174 EVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--------- 224
+V+ + N +L +MR LL+N I ++PY+ ++P ++TC + +LG
Sbjct: 229 KVTHNMKNLFILSQMMRAAEALLRNQAIYLDPYVAYMVPPILTCCIGGKLGPTSHQVPSN 288
Query: 225 -------------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP 271
+R A + + LR A L+ IC+++ L+TR+ +T L +DP
Sbjct: 289 ASSETLNGTAPDYSRAAQDAFYLRTLAAHLLKDICRKHSTSNQGLKTRIARTCLKQFMDP 348
Query: 272 KRALTQHYGAVQG-LAALGP-NVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRV 329
++++ H+GA+Q L LGP + +R L+LPN+ Y + L +K ++ RH+A +
Sbjct: 349 EKSVGTHFGALQALLLVLGPGDALRGLILPNIKLY----NDDFLAKKLADDGTRHDAEIL 404
Query: 330 YGALL------------QAAGQCIYDRLKIFPPLSSLPARSVWKTNGIVA--TLSNKRKT 375
L+ + A + + P L L R V K IVA +SNK
Sbjct: 405 LQVLVGSFPALVPKSVRERADKAKSEGTYAAPNLEELRERLVDKVGDIVAGRIISNK--- 461
Query: 376 SMDLEEQPPLKK 387
M LE Q L+K
Sbjct: 462 -MHLEAQEILRK 472
>gi|328860727|gb|EGG09832.1| hypothetical protein MELLADRAFT_47407 [Melampsora larici-populina
98AG31]
Length = 562
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/376 (35%), Positives = 208/376 (55%), Gaps = 28/376 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYR-DLFYLDDKDVEFKDV 59
MRH++RT L +DVD AL+ +N+EP++GFAS L FRR +L+++DD++++ +
Sbjct: 55 MRHAKRTKLMVEDVDYALRAKNIEPLWGFASTDTLSFRRTTSTAGNLYFVDDEEIDLTKI 114
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQ---------AIAAPSNGTNNEQKDG 110
+ A LP P +TS HWLA+EGVQP IP+N A + S + E+ +
Sbjct: 115 VNAQLPPIPRETSYTAHWLAVEGVQPAIPQNPSAAELKNHPAFPAYLSASRSDSKEEDE- 173
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
K+ + LSREL+LYFD++T A S D AL SL+ D GLH LVPY F
Sbjct: 174 ---HKKMNINQHLSRELRLYFDRVTS-AASSEDQRAKNAALASLSGDPGLHQLVPYLVQF 229
Query: 171 VADEVSRGLNN-----YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN 225
VA++V+ L + S L + ++ ++L N H+ +EPYLHQ++PS++TCL++ +
Sbjct: 230 VAEKVTHTLTSTSSPQLSSLRDSIHILESILSNSHLYLEPYLHQILPSMLTCLLSSSFSS 289
Query: 226 RLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGL 285
E+R A L++ R+ Y TL++R+ KTL +L+ PK GAV G+
Sbjct: 290 SPPTLEIEVRKLAASLLSTQVSRFQPFYPTLRSRILKTLAKSLISPKATDGNRLGAVIGI 349
Query: 286 AALGPNVVRLLLLPNLGPYLSLLEPEM----LLEKQKNEVKRHEAWRVYGALLQAAGQCI 341
ALG R++L NL + LE ++ L+E++ ++ + + G + I
Sbjct: 350 RALGMEATRVILAQNLKAFGECLEADIAEGKLVEERVQDLVKETLSTMAGFF---SSSEI 406
Query: 342 YDRLKIFPPLSSLPAR 357
+RLK P L ++PA+
Sbjct: 407 TERLKK-PKLITIPAQ 421
>gi|410074875|ref|XP_003955020.1| hypothetical protein KAFR_0A04500 [Kazachstania africana CBS 2517]
gi|372461602|emb|CCF55885.1| hypothetical protein KAFR_0A04500 [Kazachstania africana CBS 2517]
Length = 551
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 188/355 (52%), Gaps = 61/355 (17%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY--------RDLFYLDDKD 53
RHS+ LTT DV +ALK+ NVEP+YG+ L F + + Y + ++YL++++
Sbjct: 57 RHSKTEVLTTGDVAKALKVLNVEPLYGYHDN--LSFDKNVSYTKVHTSGGQSVYYLNEEE 114
Query: 54 VEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN----------------------- 90
V+F +I PLP+ P + HWLAIEGVQP I EN
Sbjct: 115 VDFDKLINEPLPQVPRLPNFSTHWLAIEGVQPAIVENPNLLEIRSSIPPTTRGAIVTALN 174
Query: 91 -APVQAIAAPSNGTNNEQKD-----------GLPVEIKLPVKHILSRELQLYFDKITELA 138
+Q + S+ Q+D G E+K VKH+LS+ELQ+YF+K+
Sbjct: 175 DNSLQTASGSSSSALTLQEDKISQPLSSVKPGQNTEVKPLVKHVLSKELQIYFNKVISAL 234
Query: 139 VSRSDSVLFKQ-----ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 193
S+ + Q AL SL TD+GLH LVPYF F+A++++ L++ LL ++ +++
Sbjct: 235 TSKDQEDVNAQHMRTAALTSLRTDNGLHQLVPYFIQFIAEQITHNLSDLELLTTILEMIY 294
Query: 194 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-----------NRLADNHWELRDFTAKLV 242
+LL NP I ++PY+H LMPS++T L+AK+LG + LRDF A L+
Sbjct: 295 SLLSNPSIFLDPYIHSLMPSILTLLLAKKLGGAPNTDSKDDLTEFLEKTNALRDFAASLL 354
Query: 243 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+ K++ VY +L+ R+T+TLL LD R +YG ++G+ L VR L
Sbjct: 355 DYVLKKFPQVYKSLKPRVTRTLLKTFLDTNRVFGTYYGCLKGITVLESEAVRFFL 409
>gi|401841666|gb|EJT44019.1| TAF6-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 516
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 194/355 (54%), Gaps = 61/355 (17%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI--------GYRDLFYLDDKD 53
RHS+R LTTDDV +AL++ NVEP+YG+ G + RA+ G + ++YLD+++
Sbjct: 57 RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVN--RAVSFSKVNTSGGQSVYYLDEEE 114
Query: 54 VEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQ------------AIAAPSN 101
V+F +I PLP+ P + HWLA+EGVQP I +N + AI N
Sbjct: 115 VDFDKLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALN 174
Query: 102 GTNNEQ-----------------------KDGLPVEIKLPVKHILSRELQLYFDKITELA 138
+ + K G E+K VKH+LS+ELQ+YF+K+
Sbjct: 175 DNSFQTPASSSAANASVADTSASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVVSTL 234
Query: 139 VSRSDS-----VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVW 193
+++ + + + AL SL TDSGLH LVPYF F+A+++++ L++ LL ++ +++
Sbjct: 235 TAKNQTDENAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIY 294
Query: 194 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLV 242
+LL N I ++PY+H LMPS++T L+AK+LG D+ + LRDF A L+
Sbjct: 295 SLLSNSSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQETHEFLERTNALRDFAASLL 354
Query: 243 AAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+ K++ Y +L+ R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 355 DYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKGVSVLEGESIRFFL 409
>gi|451999943|gb|EMD92405.1| hypothetical protein COCHEDRAFT_1174311 [Cochliobolus
heterostrophus C5]
Length = 476
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/357 (34%), Positives = 198/357 (55%), Gaps = 35/357 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RTTL+T D+ ALK+ NVEP+YG+ S PLRF A +G + L+Y++D++V+F+
Sbjct: 49 MRHGKRTTLSTQDISNALKVLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEK 108
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE----QKDGLP-V 113
+I APLP+ P + + HWLA+EGVQP IP+N G N +GL V
Sbjct: 109 LINAPLPKVPREITFTAHWLAVEGVQPSIPQNPNTNTADLLPKGPNANPHLAAANGLDNV 168
Query: 114 EIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD 173
+K VKH+LS+E Q F+K++ V ++ AL +++T+ G+H L Y F+A+
Sbjct: 169 NVKPLVKHVLSKESQELFNKLSGALVDETNIEWQNAALAAISTEPGIHQLTTYLLSFIAE 228
Query: 174 EVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--------- 224
+V+ + N +L +MR LL N I ++PY+ ++P ++TC + +LG
Sbjct: 229 KVTHNMKNLFILSQMMRASEALLNNQAIYLDPYIAYMVPPILTCCIGGKLGPANQTAPSN 288
Query: 225 -------------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP 271
+R A + + LR A L+ IC++Y L++R+ +T L +DP
Sbjct: 289 ASSETLGGAVPDYSRAASDAFYLRTLAAHLLRNICRKYSSSNQGLKSRIARTCLKQFMDP 348
Query: 272 KRALTQHYGAVQG-LAALGP-NVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEA 326
+ + H+GA+Q L LGP + +R L+LPN+ Y + L +K +E RH+A
Sbjct: 349 DKTVGAHFGALQALLLVLGPSDALRGLILPNIKMY----SEDFLAKKLADEGTRHDA 401
>gi|50287705|ref|XP_446282.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525589|emb|CAG59206.1| unnamed protein product [Candida glabrata]
Length = 536
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 127/362 (35%), Positives = 195/362 (53%), Gaps = 66/362 (18%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGG----PLRFRR--AIGYRDLFYLDDKDVE 55
RHS+R TLTTDDV +AL++ NVEP+YG+ G L F + G + ++YLD+ +V+
Sbjct: 73 RHSKRDTLTTDDVAKALRVLNVEPLYGYHDGSHSNRELSFAKVNTAGGQSVYYLDEGEVD 132
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN----------------APVQAI--- 96
F +I PLP+ P + HWLA+EGVQP I +N A V A+
Sbjct: 133 FDKLINEPLPQVPRVPTFTTHWLAVEGVQPAIVQNPNLNDIRQSQPPIVRGAIVTALNES 192
Query: 97 -------AAPSNGTNNEQ-----------------KDGLPVEIKLPVKHILSRELQLYFD 132
+ +NGT + G V++K VKH+LS+ELQ+YF+
Sbjct: 193 SSQLGGSSGSNNGTGKGSVGGESVGGSGSNLASVVQPGQNVDVKPLVKHVLSKELQIYFN 252
Query: 133 KITELAVSRSDSV------LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLF 186
+I +S + AL+SL TD+GLH LVPYF F+A++++ L++ LL
Sbjct: 253 QIISTLTKHVESGDEEGQHMKGAALMSLKTDTGLHQLVPYFIQFIAEQITHNLSDLELLG 312
Query: 187 ALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN-----------RLADNHWELR 235
++ ++++LL N I ++PY+H LMPSV+T L+AKRLG + +R
Sbjct: 313 TILEMMYSLLSNTSIFLDPYIHSLMPSVLTLLLAKRLGGTPEKDDEASAVEFLEKTNAVR 372
Query: 236 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 295
DF A L+ I +++ VY +L+ R+T+TLL LD R+ +YG ++G++ L P +R
Sbjct: 373 DFAASLLDHILRKFPQVYKSLKPRVTRTLLKTFLDTNRSFGTYYGCLRGVSVLEPESIRF 432
Query: 296 LL 297
L
Sbjct: 433 FL 434
>gi|260796579|ref|XP_002593282.1| hypothetical protein BRAFLDRAFT_83827 [Branchiostoma floridae]
gi|229278506|gb|EEN49293.1| hypothetical protein BRAFLDRAFT_83827 [Branchiostoma floridae]
Length = 653
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 129/329 (39%), Positives = 181/329 (55%), Gaps = 53/329 (16%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M H +R L+T D D ALKL+NVEP+YGF + + FR A G R+L + ++K+VE D+
Sbjct: 53 MHHGKRRKLSTADFDNALKLKNVEPLYGFHAEEHIPFRFASGGGRELHFYEEKEVELGDI 112
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP---------------VQAIAAPSNGTN 104
I APLPR PLD ++ HWLAIEGVQP IPEN P V A +GT
Sbjct: 113 INAPLPRIPLDVNLKAHWLAIEGVQPSIPENPPPVPKEDQHAADRPPGVTAKPPGKDGTK 172
Query: 105 NEQK------DGLPVEI-----KLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVS 153
K GLP E+ K + H LS E QLY+ +ITE V +S ++A+
Sbjct: 173 PAGKPGKAEVKGLPSEVAGVKLKPVLTHELSVEQQLYYREITEACVGSCES---RRAV-- 227
Query: 154 LATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPS 213
V+ +N +LL LMR+V L+ N + +E YLH+++P+
Sbjct: 228 --------------------RVNVVQSNLALLIYLMRMVKALMDNTTLHLEKYLHEVIPA 267
Query: 214 VVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPK 272
V TC+++K+L R DNHW LRDF A+L+ +C+ + N +Q+R+TKT L D +
Sbjct: 268 VATCILSKQLCQRPDVDNHWALRDFAARLMGNMCRNFSSNINNIQSRMTKTYTKILHDEQ 327
Query: 273 RALTQHYGAVQGLAALGPNVVRLLLLPNL 301
L YGA+ GLA +G +VV+ LL+P L
Sbjct: 328 SHLATRYGALAGLAEMGHDVVKSLLIPKL 356
>gi|67468804|ref|XP_650399.1| TFIID subunit [Entamoeba histolytica HM-1:IMSS]
gi|56467020|gb|EAL45013.1| TFIID subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|407044367|gb|EKE42549.1| TFIID subunit, putative [Entamoeba nuttalli P19]
gi|449702106|gb|EMD42805.1| transcription initiation factor tfiid, putative [Entamoeba
histolytica KU27]
Length = 433
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 170/300 (56%), Gaps = 10/300 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+R LT D++ ALKL+ +EP YG+ PL ++R ++F ++ + + +
Sbjct: 50 MRHSKRKILTIQDINSALKLKKLEPYYGYNPSIPLYYQRLPSNHEMFVRQEQSIGLNEAV 109
Query: 61 EAPL-PRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
P P D ++ CHWL +EGVQP+IP+N PS +QK +E K +
Sbjct: 110 HCQFFPDIPRDINVGCHWLTVEGVQPLIPQN--------PSVVVQEKQKQEETIETKPII 161
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
+H LS+ELQ+Y+D + E+ ++ ++ + L S+ TDSGL L PYF ++++ L
Sbjct: 162 QHSLSKELQMYYDMVVEI-LNTNNKEKIDECLDSVRTDSGLQQLTPYFIRYISNHTLANL 220
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
+ +L ++ +V + +N +I +EPYLHQL P ++T +V K++G DNHW +R A
Sbjct: 221 GSLEILANMLSLVNAMRENQNINLEPYLHQLFPVILTLVVTKQIGTNSYDNHWNIRVQAA 280
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
+V + RY Y L RL +T L A+ D + LT YG + G+ A+GP V LL+P
Sbjct: 281 AIVKKLRDRYSEKYGRLHARLLQTYLQAITDATKPLTTQYGGIVGITAMGPRAVYHLLVP 340
>gi|254580585|ref|XP_002496278.1| ZYRO0C14718p [Zygosaccharomyces rouxii]
gi|238939169|emb|CAR27345.1| ZYRO0C14718p [Zygosaccharomyces rouxii]
Length = 508
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 192/352 (54%), Gaps = 56/352 (15%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVE 55
RHS+R LTTDD+ +AL++ NVEP+YG+ G F + A+G + ++YL+D++V+
Sbjct: 57 RHSKRDVLTTDDISKALRVLNVEPLYGYHDGSAFEQDVSFTKVQAVGGQSVYYLNDEEVD 116
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---------AAPSNGTNN- 105
F +I PLP+ P + HWLA+EGVQP I +N ++ I A N+
Sbjct: 117 FDKLINEPLPQVPRVPTFTTHWLAVEGVQPAIIQNPNLKDIRLSQPPIVRGAIVTALNDN 176
Query: 106 ---------------EQKDGL---------PVEIKLPVKHILSRELQLYFDKITELAVSR 141
E+KD +E+K VKH+LS ELQ+YF+K+ S+
Sbjct: 177 SLQSSTSSAASISLGEEKDAQHMSSVKPNQNIEVKPLVKHVLSMELQIYFNKVIAALTSK 236
Query: 142 S----DSVLFKQA-LVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLL 196
++ K A L SL TDSGLH LVPYF F+A++++ L++ LL ++ ++++LL
Sbjct: 237 DQDDPNAQHMKAAGLTSLKTDSGLHQLVPYFIQFIAEQITHNLSDLDLLTTILEIIYSLL 296
Query: 197 QNPHIQIEPYLHQLMPSVVTCLVAKRLGN-----------RLADNHWELRDFTAKLVAAI 245
N I ++PY+H LMPS++T L+AK+LG + LRDF A L+ +
Sbjct: 297 SNKSIFLDPYIHSLMPSILTLLLAKKLGGSPDSDRPEDVREFLEKTNALRDFAASLLDYV 356
Query: 246 CKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
K++ VY +L+ R+ +TLL LD R +YG ++G++ L +R L
Sbjct: 357 LKKFPQVYKSLKPRVIRTLLKTFLDTNRVFGTYYGCLRGVSVLESESIRFFL 408
>gi|358056098|dbj|GAA97952.1| hypothetical protein E5Q_04632 [Mixia osmundae IAM 14324]
Length = 511
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 186/338 (55%), Gaps = 41/338 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDV 59
MRH++RT L DD+D ALK RNVEP+YGF + PL FR+ ++Y++D++++ +
Sbjct: 56 MRHAKRTKLRVDDIDYALKARNVEPLYGFRTNTPLAFRKTTTATGTVYYVEDEEIDLNRI 115
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAIAAPSNGTN--NEQKDGL--- 111
+ A LP AP D S HWLAIEGVQP IP+N A ++A+ P N + G
Sbjct: 116 LHAQLPPAPRDVSYTAHWLAIEGVQPAIPQNPSPAEIRALQTPHLHANAFGSRAGGFASQ 175
Query: 112 --------PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPL 163
P +++ VKH+LSRELQLYF+++ A S SD + + AL SL D+G+ PL
Sbjct: 176 APKVPTANPDDVRPLVKHVLSRELQLYFERLVAAATSESDETMREAALASLRGDTGIGPL 235
Query: 164 VPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 223
VPY + ++++ L + LL + V+ L+ NP++ IEPYLHQ+ P+V+T L+ L
Sbjct: 236 VPYLVQWSVEKIAHNLRDLVLLDQTLSVIHALIDNPNLFIEPYLHQIFPAVLTPLLTTVL 295
Query: 224 GNRLAD-------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLD----PK 272
G+ A + +LR L+ I RY H Y L+ R+ + L+ AL + P
Sbjct: 296 GDGSAVAFGAAQLHSTDLRQHAGSLLRLIMDRYAHAYPALKPRILRALVRALTELPMLPS 355
Query: 273 RA-------------LTQHYGAVQGLAALGPNVVRLLL 297
A + YGAV G+ A+G VV+ +L
Sbjct: 356 TAEGELSERVSVAASIGTRYGAVLGIQAMGTQVVQSIL 393
>gi|50287717|ref|XP_446288.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525595|emb|CAG59212.1| unnamed protein product [Candida glabrata]
Length = 534
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/362 (34%), Positives = 194/362 (53%), Gaps = 66/362 (18%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGG----PLRFRR--AIGYRDLFYLDDKDVE 55
RHS+R TLTTDDV +AL++ NVEP+YG+ G L F + G + ++YLD+ +V+
Sbjct: 72 RHSKRDTLTTDDVAKALRVLNVEPLYGYHDGSHSNRELSFAKVNTAGGQSVYYLDEGEVD 131
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN----------------APVQAI--- 96
F +I PLP+ P + HWLA+EGVQP I +N A V A+
Sbjct: 132 FDKLINEPLPQVPRVPTFTTHWLAVEGVQPAIVQNPNLNDIRQSQPPIVRGAIVTALNES 191
Query: 97 -------AAPSNGTNNEQ-----------------KDGLPVEIKLPVKHILSRELQLYFD 132
+ +NGT + G V++K VKH+LS+ELQ+YF+
Sbjct: 192 SSQLGGSSGSNNGTGKGSVGGESVGGSGSNLASVVQPGQNVDVKPLVKHVLSKELQIYFN 251
Query: 133 KITELAVSRSDSV------LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLF 186
+I +S + AL+SL TD+GLH LVPYF F+A++++ L++ LL
Sbjct: 252 QIISTLTKHVESGDEEGQHMKGAALMSLKTDTGLHQLVPYFIQFIAEQITHNLSDLELLG 311
Query: 187 ALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN-----------RLADNHWELR 235
++ ++++LL N I ++PY+H LMPSV+T L+ KRLG + +R
Sbjct: 312 TILEMMYSLLSNTSIFLDPYIHSLMPSVLTLLLTKRLGGTPEKDDEASAVEFLEKTNAVR 371
Query: 236 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 295
DF A L+ I +++ VY +L+ R+T+TLL LD R+ +YG ++G++ L P +R
Sbjct: 372 DFAASLLDHILRKFPQVYKSLKPRVTRTLLKTFLDTNRSFGTYYGCLRGVSVLEPESIRF 431
Query: 296 LL 297
L
Sbjct: 432 FL 433
>gi|189209772|ref|XP_001941218.1| TATA-binding protein-associated-factor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187977311|gb|EDU43937.1| TATA-binding protein-associated-factor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 476
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 141/432 (32%), Positives = 227/432 (52%), Gaps = 53/432 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RTTL+T D+ ALK+ NVEP+YG+ S PLRF A +G + L+Y++D++V+F+
Sbjct: 49 MRHGKRTTLSTQDISNALKVLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEK 108
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE----QKDGLP-V 113
+I APLP+ P + + HWLA+EGVQP IP+N G N +GL V
Sbjct: 109 LINAPLPKVPREITFTAHWLAVEGVQPSIPQNPNTNTADLLPKGPNANPHLAAANGLDNV 168
Query: 114 EIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD 173
+K VKH+LS+E Q F+K++ + ++ AL +++T+ G+H L Y F+A+
Sbjct: 169 NVKPLVKHVLSKESQELFNKLSGALIDETNIEWQNAALAAISTEPGIHQLTTYLLSFIAE 228
Query: 174 EVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--------- 224
+V+ + N +L +MR LL+N I ++PY+ ++P ++TC + +LG
Sbjct: 229 KVTHNMKNLFILSQMMRAAEALLKNQAIYLDPYVAYMVPPILTCCIGGKLGPTSHQVPSN 288
Query: 225 -------------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP 271
+R A + + LR A L+ IC+++ L++R+ +T L +DP
Sbjct: 289 ASSETLNGTAPDYSRAAQDAFYLRTLAAHLLKDICRKHSTSNQGLKSRIARTCLKQFMDP 348
Query: 272 KRALTQHYGAVQG-LAALGP-NVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEA--- 326
++++ H+GA+Q L LGP + +R L+LPN+ Y + L +K ++ RH+A
Sbjct: 349 EKSVGTHFGALQALLLVLGPGDALRGLILPNIKLY----NDDFLAKKLADDGTRHDADIL 404
Query: 327 -WRVYGALLQAAGQCIYDRLK--------IFPPLSSLPARSVWKTNGIVA--TLSNKRKT 375
+ G+ + I +R P L L R K IVA +SNK
Sbjct: 405 LQVLVGSFPALVPKSIRERADKAKSEGNYAAPNLEDLRERLSDKVGDIVAGRIISNK--- 461
Query: 376 SMDLEEQPPLKK 387
M LE Q L+K
Sbjct: 462 -MQLEAQEILRK 472
>gi|429861438|gb|ELA36127.1| transcription initiation factor tfiid complex 60 kda subunit
[Colletotrichum gloeosporioides Nara gc5]
Length = 461
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/323 (37%), Positives = 189/323 (58%), Gaps = 19/323 (5%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR +RRTTLT +D+ ALK+ N+EP+YG+ S PLRF A +G + LFY++D++V+F+
Sbjct: 55 MRAARRTTLTVNDISTALKVLNIEPLYGYDSTRPLRFGEASLGPGQPLFYIEDEEVDFEK 114
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV-----QAIAAPSNGTN---NEQKDG 110
+I APLP+ P D S HWLAIEGVQP IP+N Q + G N
Sbjct: 115 LINAPLPKVPRDMSFTAHWLAIEGVQPSIPQNPTTAESRSQELVPKGPGANPALAALAGN 174
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSD----SVLFKQALVSLATDSGLHPLVPY 166
+ + VKH++S+EL LYF+K+ + + L + AL S+ D GLH L+PY
Sbjct: 175 DSISFRPAVKHVVSKELILYFEKVQNAILDDNPDEEVGRLRQAALASVRDDPGLHQLIPY 234
Query: 167 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL--- 223
F FVA++V+ L++ +L M + L+QN + ++PY + + V+TC++++++
Sbjct: 235 FINFVANQVTHRLDDVFILRQSMELTLALIQNKKLFLDPYANSIAAPVLTCILSRKIGAE 294
Query: 224 -GNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAV 282
G+ ++LR+F+A L+ I ++Y N L+ +L +T L +DP + H+GA+
Sbjct: 295 DGSDAVKEQYKLREFSASLLGEIARKYSASNNLLRPKLVRTCLKFFMDPDKPPAAHFGAI 354
Query: 283 QGLA-ALGPNVVRLLLLPNLGPY 304
G+A A GP VR+L+L L Y
Sbjct: 355 SGVASAGGPEAVRVLVLKCLRAY 377
>gi|310800694|gb|EFQ35587.1| TATA box binding protein associated factor [Glomerella graminicola
M1.001]
Length = 461
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 215/396 (54%), Gaps = 24/396 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR SRRTTLT +D+ ALK N+EP+YG+ S PLR+ A +G + LFY++D++V+F+
Sbjct: 55 MRASRRTTLTVNDISTALKALNIEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEK 114
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-----APVQAIAAPSNGTN---NEQKDG 110
+I APLP+ P D S HWLAIEGVQP IP+N + Q + G N
Sbjct: 115 LINAPLPKVPRDMSFTAHWLAIEGVQPSIPQNPTTAESRSQELVPKGPGANPALAALAGN 174
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPY 166
V + VKH++S+EL LYF+K+ + + + V +Q AL S+ D GLH L+PY
Sbjct: 175 DSVSFRPAVKHVVSKELILYFEKVQNALLDDNPDEEVVRLRQAALESVRDDPGLHQLIPY 234
Query: 167 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 226
F FVA++V+ L++ L M + L+ N + ++PY + + V+TC++ +++G
Sbjct: 235 FINFVANQVTHRLDDVFTLRQAMELTAALIANTKLYLDPYANAIAAPVLTCILGRKIGGD 294
Query: 227 LADN----HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAV 282
A + ++LR+F+A L+ I ++Y N L+ +L +T L +DP + H+GA+
Sbjct: 295 DAADAMREQYQLREFSASLLGQIARKYAASNNLLRPKLVRTCLKFFMDPDKPPATHFGAI 354
Query: 283 QGLAAL-GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCI 341
G+AA GP VR+L+L L Y + +L+ K++ + E + G +L+A
Sbjct: 355 TGVAAAGGPEAVRVLVLKCLRAY-----HDNILQPLKDKGEGVEFEMLVGGILKAIATMT 409
Query: 342 YDRLKIFPPLSSLPARSVWKTNGIVATLSNKRKTSM 377
D ++ + N + + +R SM
Sbjct: 410 EDDRATVNGINGTGGNYAAELNEFIGPILGERLNSM 445
>gi|340375218|ref|XP_003386133.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Amphimedon queenslandica]
Length = 593
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 187/331 (56%), Gaps = 32/331 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGG--PLRFRRAIGYRDLFYLDDKDVEFKD 58
MRHS+R L+ D+D AL+ +N+EP+YGF PLR G ++++Y DD++V+
Sbjct: 59 MRHSKRNRLSCGDIDNALRSKNIEPLYGFECSEYIPLRHSSG-GGKEIYYPDDQEVDLVS 117
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV-----QAIAAPSNGTNNEQKDGLPV 113
++ +PLP+ P D S+ HWLA++GVQP++PEN P Q A + N++ +P
Sbjct: 118 IVSSPLPKLPCDVSLHSHWLAVDGVQPLVPENVPSLSLEEQRKQAVALSLNSQDASLVPK 177
Query: 114 EIKLPVK-------------------HILSRELQLYFDKITELAVSRSDSVLFKQALVSL 154
+++L K H+L+ E QLY+ ++T+ V SDS ++ L SL
Sbjct: 178 DVRLERKRKKEEEGVVEVVKLKSLQPHLLTMEQQLYYKELTDACVGLSDSK-RQEGLTSL 236
Query: 155 ATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMP 212
+TD ++ L+P F+ + +V+ G + L L+++V LL N I IE YLH L+P
Sbjct: 237 STDPSVYQLLPQLITFMTEGIKVNIGQRKLASLRNLLKMVKALLDNTSISIERYLHDLIP 296
Query: 213 SVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLD- 270
SV TCL+ + L R +++HW LR+ +AK+++ ICKRY + N +QTRLT+ L L
Sbjct: 297 SVSTCLLNRHLCTRPESEDHWSLRELSAKILSMICKRYSNSVNNIQTRLTRILSQTLQGL 356
Query: 271 PKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
+ L HYGAV LG + ++P L
Sbjct: 357 TLQELASHYGAVACFGELGQEAISACVIPRL 387
>gi|156848850|ref|XP_001647306.1| hypothetical protein Kpol_1002p96 [Vanderwaltozyma polyspora DSM
70294]
gi|156117991|gb|EDO19448.1| hypothetical protein Kpol_1002p96 [Vanderwaltozyma polyspora DSM
70294]
Length = 509
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 187/352 (53%), Gaps = 56/352 (15%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVE 55
RHS+R LTTDD+ +AL+ NVEP+YG+ G + F + A G + ++YL+D++V+
Sbjct: 57 RHSKRDILTTDDISKALRALNVEPLYGYHDGSAINKNISFNKVNASGGQSIYYLNDEEVD 116
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI---------AAPSNGTNNE 106
F +I LP+ P + HWLA+EGVQP I +N + I A N+
Sbjct: 117 FDKLINNTLPQVPRLPTFTTHWLAVEGVQPAIAQNPNLNDIRISQPPIVRGAIVTALNDN 176
Query: 107 Q-------------------------KDGLPVEIKLPVKHILSRELQLYFDKITELAVSR 141
K G E+K +KH+LS+ELQ+YF+K+ S
Sbjct: 177 SLQASSSSAESISLSEDKNSSRSSAVKPGHNTEVKPLLKHVLSKELQIYFNKVVAALTST 236
Query: 142 SDS-----VLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLL 196
S + AL SL TDSGLH LVPYF F+A++++ L++ LL ++ ++++LL
Sbjct: 237 DTSDPNAQYMKAAALSSLKTDSGLHQLVPYFIQFIAEQITHHLSDLDLLTTILEMIYSLL 296
Query: 197 QNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAAI 245
N I ++PY+H LMPS++T L+AK+LG A + E LRDF A L+ +
Sbjct: 297 SNESIFLDPYIHSLMPSILTLLLAKKLGGSPASDSKEDIQELLEKANALRDFAASLLDYV 356
Query: 246 CKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
K++ Y +L+ R+T+TLL LD R +YG ++G++ L +R L
Sbjct: 357 LKKFPQFYKSLKPRVTRTLLKTFLDTNRVFGTYYGCLRGISVLESESIRFFL 408
>gi|396492072|ref|XP_003843707.1| hypothetical protein LEMA_P013580.1 [Leptosphaeria maculans JN3]
gi|312220287|emb|CBY00228.1| hypothetical protein LEMA_P013580.1 [Leptosphaeria maculans JN3]
Length = 649
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 127/375 (33%), Positives = 202/375 (53%), Gaps = 53/375 (14%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RTTL T D+ ALK+ NVEP+YG+ S PLRF A +G + L+Y++D++V+F+
Sbjct: 49 MRHGKRTTLNTLDISNALKVLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEK 108
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAI------------AAPSNGTNNE 106
+I APLP+ P + + HWLA+EGVQP IP+N + A +NG +N
Sbjct: 109 LINAPLPKVPREITFTAHWLAVEGVQPSIPQNPTTNSADLLPKGPNANPHLAAANGLDN- 167
Query: 107 QKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPY 166
V +K VKH+LS+E Q F+K++ ++ AL +++T+ G+H L Y
Sbjct: 168 ------VNVKPLVKHVLSKESQELFNKLSGALTDETNIEWQNAALAAISTEPGIHQLTTY 221
Query: 167 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 226
F+A++V+ L + +L +MR LL N I ++PY+ ++P V+TC LG R
Sbjct: 222 LLSFIAEKVTHNLKDLFVLHQMMRATEALLNNQAIYLDPYVAYMVPPVLTCCTGNNLGPR 281
Query: 227 ------------------------LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTK 262
L D+H ELRD A ++ IC++Y L+ R+ +
Sbjct: 282 PRQQPTSAFTENVNGAAANGHVTGLKDHH-ELRDKAASILKHICRKYSSSNQGLKARIAR 340
Query: 263 TLLNALLDPKRALTQHYGAVQGLA-ALGPN-VVRLLLLPNLGPYLSLLEPEMLLEKQKNE 320
T L +DPK++ HYGA+ L LG + +++L+LPN+ Y LL+ + +++
Sbjct: 341 TCLKQFMDPKKSFGAHYGALHALVLILGIDEAMKMLILPNVQIYNDLLKAGL-----EDD 395
Query: 321 VKRHEAWRVYGALLQ 335
+R EA R+ G +
Sbjct: 396 GRRSEAERMVGLFMN 410
>gi|171693115|ref|XP_001911482.1| hypothetical protein [Podospora anserina S mat+]
gi|170946506|emb|CAP73307.1| unnamed protein product [Podospora anserina S mat+]
Length = 466
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/357 (35%), Positives = 200/357 (56%), Gaps = 25/357 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR S RTTLT DV A+++ VEP+YG+ S PLR+ A +G + LFY++D++V+F+
Sbjct: 55 MRASNRTTLTVQDVSNAMRVLQVEPLYGYESTRPLRYGEASLGPGQPLFYIEDEEVDFEK 114
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA----PSNGTNNEQKDGLP-- 112
+I APLP+ P DTS HWLA+EGVQP IP+N ++ P N L
Sbjct: 115 LINAPLPKVPRDTSFTSHWLALEGVQPSIPQNPTTAETSSKDLLPKGPGANPALAALAGN 174
Query: 113 --VEIKLPVKHILSRELQLYFDKITELAV----SRSDSVLFKQALVSLATDSGLHPLVPY 166
V + VKH++S+EL LYFDKI + + L AL S+ +D GLH L+PY
Sbjct: 175 DNVSFRPAVKHVISKELILYFDKIQSAILDDDPDEEKTRLRMAALESVRSDPGLHQLLPY 234
Query: 167 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN- 225
F F+A++V+ L++ +L +M + ++QNP+ ++PY L ++TCL++ +LG
Sbjct: 235 FVNFIANQVTLRLDDLFVLRQMMELTEAIIQNPNFFLDPYASSLAAPILTCLMSNKLGGI 294
Query: 226 ----RLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGA 281
+ + LR+ A L+ + +Y L+ +LT+T L ++P R +GA
Sbjct: 295 EDGTDTVKDQYSLRELAASLLGVLATKYNKSNRQLRPKLTRTCLKYFMEPNRPPAVLFGA 354
Query: 282 VQGLAAL-GPNVVRLLLLPNLGPY-LSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
+ G+AA GP VR+L+LPN+ + ++L+P K E + E + G +++A
Sbjct: 355 ISGVAAAGGPEAVRILMLPNVKSFDQAVLQP----LHDKGEAHKLEYEMLVGGIMKA 407
>gi|400594744|gb|EJP62577.1| TATA box binding protein associated factor [Beauveria bassiana
ARSEF 2860]
Length = 462
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 141/362 (38%), Positives = 199/362 (54%), Gaps = 31/362 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR +RRTTLT +DV AL++ + EP+YG+ S PLRF A +G + LFY+DD++VEF+
Sbjct: 54 MRAARRTTLTVNDVSLALRVLDAEPLYGYDSTRPLRFGEASLGPGQPLFYIDDEEVEFEK 113
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA-----PSNGTNNEQKDGLPV 113
+I APLP+ P D + HWLAIEGVQP IP+N P A + P N L
Sbjct: 114 LINAPLPKVPRDMNFTAHWLAIEGVQPSIPQN-PTTAESRSQDLLPKGTGANPALSALAG 172
Query: 114 EIKLP----VKHILSRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVP 165
P VKHI+S+EL LYFDKI + + + V +Q AL S+ D GLH L P
Sbjct: 173 NDSSPSNPSVKHIVSKELILYFDKIQAAILDETPDEEVVRLRQAALGSVRDDPGLHQLAP 232
Query: 166 YFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN 225
YF F+ D V+ L++ L +M + L++N + ++PY L V+TCL+A++LG+
Sbjct: 233 YFINFIMDRVTHQLDDTFTLKQMMELTNALIENKTLFLDPYASSLSAPVLTCLMARKLGS 292
Query: 226 ----RLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGA 281
+ELR A L+ + +Y L+ +LT+T L LDP + YGA
Sbjct: 293 DDGVDAMKEQYELRQLAASLIGRMAHKYSASNALLRPKLTRTCLRYFLDPTKPPAVLYGA 352
Query: 282 VQG-LAALGPNVVRLLLLPNLGPYLS-LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQ 339
V G L A GP VRLL+L NL + S +L+P L EK + ++ Y L+Q Q
Sbjct: 353 VNGILEAGGPEAVRLLILRNLKSFDSGILQP--LKEKSEGSIE-------YEMLVQGLVQ 403
Query: 340 CI 341
+
Sbjct: 404 AV 405
>gi|403160505|ref|XP_003320996.2| hypothetical protein PGTG_02038 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170276|gb|EFP76577.2| hypothetical protein PGTG_02038 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 562
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 187/325 (57%), Gaps = 30/325 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRR---AIGYRDLFYLDDKDVEFK 57
MRHS+RT L +DVD AL+ +N+EP++GFAS L FRR A+G +L+++D+++++
Sbjct: 55 MRHSKRTNLLVEDVDYALRAKNIEPLWGFASTDTLSFRRTTSAVG--NLYFIDEEEIDLT 112
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN------------APVQAIAAPSNGTNN 105
V+ A LP P + S HWLA+EGVQP IP+N + +Q+ A PS+
Sbjct: 113 KVLTAELPPIPQEASYTAHWLAVEGVQPAIPQNPTPAELKSHPAFSGLQSSAIPSSSKQ- 171
Query: 106 EQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVP 165
P L K LSREL+LYFD++T A+S +D AL SL+ D GLH LVP
Sbjct: 172 -----APETKNLTTKEHLSRELRLYFDRVTAAALS-NDQSSRNAALASLSGDPGLHQLVP 225
Query: 166 YFTYFVADEVSRGLNNY----SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 221
Y F A++++ L++ L +++++ ++L NPH +EPYLHQ++PS++TCL++
Sbjct: 226 YLIQFAAEKITTTLSHTEPSLEHLRDVLQILESILSNPHSYLEPYLHQILPSILTCLLSS 285
Query: 222 RLGNRLADNHW--ELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHY 279
+ + E+R L+ + RY H Y TL+TR+ KTL +L+DP+
Sbjct: 286 SFPSSPVTDELEREIRCTAGSLLKSQLNRYQHSYPTLRTRILKTLTKSLIDPQSTDRNQL 345
Query: 280 GAVQGLAALGPNVVRLLLLPNLGPY 304
GA+ G+ LG + +L N+ +
Sbjct: 346 GAIIGVKYLGLEPTKTVLSQNIKAF 370
>gi|440301765|gb|ELP94151.1| transcription initiation factor tfiid, putative [Entamoeba invadens
IP1]
Length = 435
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 173/302 (57%), Gaps = 10/302 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHSRR L+ +D++ ALK++ +EP YG+ PL ++R ++F ++ ++ + +
Sbjct: 55 MRHSRRKVLSINDINSALKVKKMEPYYGYNPAVPLYYQRLHSNHEMFVRQEQTIDLSESV 114
Query: 61 EAPL-PRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
+ P P D +I CHWL ++GVQP IP+N PS + K +E K +
Sbjct: 115 HSQFFPDIPRDINIGCHWLTVDGVQPQIPQN--------PSVFVAEKVKKEETIETKPII 166
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
+H LS+ELQ+Y+D + E+ ++ + L S+ +DSGL L PYF ++++ V L
Sbjct: 167 RHSLSKELQMYYDMVVEV-LNTTQKEKISSCLDSVKSDSGLQQLTPYFIRYISNHVLTNL 225
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
N +L ++ +V L +N ++ +EPYLHQL P ++T +V K++G ++HWE+R A
Sbjct: 226 NTLDILSNMLGLVNALSENQNVNLEPYLHQLFPVILTLVVTKQIGTGAMEDHWEIRTRAA 285
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
K+V + +RY Y L RL +T L A+ + + LT YG + G+ A+G V LL+P
Sbjct: 286 KIVKKLSERYSDKYGRLNARLLQTYLKAITEATKPLTTQYGGIVGITAMGERAVFHLLVP 345
Query: 300 NL 301
+
Sbjct: 346 AM 347
>gi|169615571|ref|XP_001801201.1| hypothetical protein SNOG_10944 [Phaeosphaeria nodorum SN15]
gi|160702992|gb|EAT81443.2| hypothetical protein SNOG_10944 [Phaeosphaeria nodorum SN15]
Length = 471
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 204/378 (53%), Gaps = 54/378 (14%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MRH +RTTL+T D+ ALK+ NVEP+YG+ S PLRF A +G + L+Y++D++V+F+
Sbjct: 49 MRHGKRTTLSTHDISHALKVLNVEPLYGYESTRPLRFGEASLGPGQPLYYVEDEEVDFEK 108
Query: 59 VIEAPLPRAPLD---TSIVCHWLAIEGVQPVIPENAPVQAIA-------------APSNG 102
+I APLP+ P + T I HWLA+EGVQP IP+N P A A +NG
Sbjct: 109 LINAPLPKVPREITFTGIPAHWLAVEGVQPSIPQN-PTTNTADLLPKGPNANPHLAAANG 167
Query: 103 TNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHP 162
+N V +K VKH+LS+E Q F K++ ++ AL ++ T+ G+H
Sbjct: 168 LDN-------VNVKPLVKHVLSKESQELFAKLSSALTDETNIEWQNAALAAIRTEPGIHQ 220
Query: 163 LVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKR 222
L Y F+A++V+ + N +L +M+ LL N I ++PY+ ++P ++TC +
Sbjct: 221 LTTYLLSFIAEKVTHNMKNLFVLHQMMQATQALLDNQAIYLDPYMAYMVPPILTCCTGRH 280
Query: 223 LG---------------NRLADN--------HWELRDFTAKLVAAICKRYGHVYNTLQTR 259
LG NR N H+ELR + A L++ IC++ L++R
Sbjct: 281 LGPTTPQASSNASSETLNRNGANGPVSSQFDHFELRTYAASLLSRICQKGSASNQGLKSR 340
Query: 260 LTKTLLNALLDPKRALTQHYGAVQGLAALG-PNVVRLLLLPNLGPYLSLLEPEMLLEKQK 318
+ +T L +DP ++ HYGA++ L ++ V++L+LPNL Y ++L K
Sbjct: 341 IARTCLKQFMDPDKSPGTHYGALRALMSITHQEGVQMLILPNLKAY----NDDVLKIKLA 396
Query: 319 NEVKRHEAWRVYGALLQA 336
E R++ RV G L++A
Sbjct: 397 EENSRNDTERVIGMLVRA 414
>gi|46132948|ref|XP_389187.1| hypothetical protein FG09011.1 [Gibberella zeae PH-1]
Length = 463
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 144/396 (36%), Positives = 211/396 (53%), Gaps = 39/396 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR SRRTTLT +D+ AL+ +VEP+YG+ S PLR+ A +G + LFY++D++V+F+
Sbjct: 54 MRASRRTTLTVNDISLALRALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEK 113
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV-----QAIAAPSNGTN---NEQKDG 110
+I APLP+ P D HWLAIEGVQP IP+N Q + G N +
Sbjct: 114 LINAPLPKVPRDMGFTAHWLAIEGVQPSIPQNPTTSESRSQELLPKGPGANPALSALAGN 173
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPY 166
V +K VKHI+S+EL LYFDKI + + + V +Q AL S+ D GLH L+PY
Sbjct: 174 DNVSMKPSVKHIVSKELILYFDKIQAAVLDDNPDEEVVRLRQAALGSVRDDPGLHQLIPY 233
Query: 167 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 226
F F+ D V+ L++ L +M + L++N + ++PY L +TCL+A++LG
Sbjct: 234 FITFIMDRVTHHLDDTFTLKQMMELTNALIENKSLFLDPYASPLSAPALTCLMARKLGTE 293
Query: 227 LADN----HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAV 282
+ +ELR A LV I ++Y L+ +LT+T L LDP + YGA+
Sbjct: 294 DGTDALKEQYELRQLAASLVGQIARKYSASNTLLRPKLTRTCLKYFLDPTKPPAVLYGAI 353
Query: 283 QG-LAALGPNVVRLLLLPNLGPYLS-LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQC 340
G L A GP +R+L+L NL + S +L+P L EK + + Y L+Q Q
Sbjct: 354 HGLLEAGGPEAIRVLVLRNLKTFDSGILQP--LREKMEGSMD-------YEMLVQGIVQA 404
Query: 341 IYDRLKIFPPLSSLPARSVWKTNGIVATLSNKRKTS 376
+ +SL TNGI + S + + S
Sbjct: 405 V----------ASLADHISSDTNGINGSTSVEGEAS 430
>gi|358388344|gb|EHK25937.1| hypothetical protein TRIVIDRAFT_63275 [Trichoderma virens Gv29-8]
Length = 468
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 204/367 (55%), Gaps = 41/367 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR +RRTT+T +DV ALK+ + EP+YG+ S PLR+ A +G + LFY++D++V+F+
Sbjct: 54 MRAARRTTMTVNDVSMALKVLDAEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEK 113
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSN------GTN-------- 104
+I APLPR P D + HWLAIEGVQP IP+N P A P + G N
Sbjct: 114 LINAPLPRVPRDMNFTAHWLAIEGVQPSIPQN-PTSAELRPQDLLPKGPGANPALSALAG 172
Query: 105 NEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGL 160
N+ G P VKHI+S+EL LYFDKI + + + + +Q AL S+ D GL
Sbjct: 173 NDAASGQP-----SVKHIVSKELILYFDKIQAAILDDNPDEEVIRLRQAALGSVRDDPGL 227
Query: 161 HPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVA 220
H LVPYF F+ D V+ L++ L +M + L++N + ++PY L V+TCL+A
Sbjct: 228 HQLVPYFINFIMDRVTHQLDDTFTLKQMMELTNALIENKSLFLDPYASSLSAPVLTCLMA 287
Query: 221 KRLGNRLADN----HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALT 276
++LG + ++LR A L+ I ++Y + L+ +LT+T L LDP +
Sbjct: 288 RKLGTEDGQDSLKEQYDLRQLAASLLGRIARKYSASNSLLRPKLTRTCLKYFLDPTKPPA 347
Query: 277 QHYGAVQG-LAALGPNVVRLLLLPNLGPYLS-LLEPEMLLEKQKNEVKRHEAWRVYGALL 334
YGA+ G L A G +R+L+L NL + S +L+P L EK + ++ Y L+
Sbjct: 348 VLYGAIHGLLEAGGMEAIRVLVLRNLKSFDSGILQP--LKEKSEGSIE-------YEMLV 398
Query: 335 QAAGQCI 341
Q Q +
Sbjct: 399 QGLVQAV 405
>gi|408393425|gb|EKJ72689.1| hypothetical protein FPSE_07089 [Fusarium pseudograminearum CS3096]
Length = 463
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 211/396 (53%), Gaps = 39/396 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR SRRTTLT +D+ AL+ +VEP+YG+ S PLR+ A +G + LFY++D++V+F+
Sbjct: 54 MRASRRTTLTVNDISLALRALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEK 113
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV-----QAIAAPSNGTN---NEQKDG 110
+I APLP+ P D HWLAIEGVQP IP+N Q + G N +
Sbjct: 114 LINAPLPKVPRDMGFTAHWLAIEGVQPSIPQNPTTSESRSQELLPKGPGANPALSALAGN 173
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPY 166
V +K VKHI+S+EL LYFDKI + + + V +Q AL S+ D GLH L+PY
Sbjct: 174 DNVSMKPSVKHIVSKELILYFDKIQAAVLDDNPDEEVVRLRQAALGSVRDDPGLHQLIPY 233
Query: 167 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 226
F F+ D V+ L++ L +M + L++N + ++PY L +TCL+A++LG
Sbjct: 234 FITFIMDRVTHHLDDTFTLKQMMELTNALIENKSLFLDPYASPLSAPALTCLMARKLGTE 293
Query: 227 LADN----HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAV 282
+ ++LR A LV I ++Y L+ +LT+T L LDP + YGA+
Sbjct: 294 DGTDALKEQYDLRQLAASLVGQIARKYSASNTLLRPKLTRTCLKYFLDPTKPPAVLYGAI 353
Query: 283 QG-LAALGPNVVRLLLLPNLGPYLS-LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQC 340
G L A GP +R+L+L NL + S +L+P L EK + + Y L+Q Q
Sbjct: 354 HGLLEAGGPEAIRVLVLRNLKTFDSGILQP--LREKMEGSMD-------YEMLVQGIVQA 404
Query: 341 IYDRLKIFPPLSSLPARSVWKTNGIVATLSNKRKTS 376
+ +SL TNGI + S + + S
Sbjct: 405 V----------ASLADHISSDTNGINGSTSVEGEAS 430
>gi|380476480|emb|CCF44690.1| TATA box binding protein associated factor [Colletotrichum
higginsianum]
Length = 461
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/362 (35%), Positives = 202/362 (55%), Gaps = 24/362 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR SRRTTLT +D+ ALK N+EP+YG+ S PLR+ A +G + LFY++D++V+F+
Sbjct: 55 MRASRRTTLTVNDISTALKALNIEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEK 114
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV-----QAIAAPSNGTN---NEQKDG 110
+I APLP+ P D S HWLAIEGVQP IP+N Q + G N
Sbjct: 115 LINAPLPKVPRDMSFTAHWLAIEGVQPSIPQNPTTAESRSQELVPKGPGANPALAALAGN 174
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRS--DSV--LFKQALVSLATDSGLHPLVPY 166
+ + VKH++S+EL LYF+K+ + + + V L AL S+ D GLH L+PY
Sbjct: 175 DSISFRPAVKHVVSKELILYFEKVQNAILDDNPDEEVVRLRHAALESVRDDPGLHQLIPY 234
Query: 167 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 226
F FVA++V+ L++ L M + L+ N + ++PY + + V+TC++ +++G
Sbjct: 235 FINFVANQVTHRLDDVFTLRQAMELTAALIANTKLYLDPYANAIAAPVLTCILGRKIGAE 294
Query: 227 LADN----HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAV 282
+ ++LR+F+A L+ I ++Y N L+ +L +T L +DP + H+GA+
Sbjct: 295 DGADAMREQYQLREFSASLLGQIARKYAASNNLLRPKLVRTCLKFFMDPDKPPATHFGAI 354
Query: 283 QGLA-ALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCI 341
G+A A GP VR+L+L L Y + +L+ ++ + E + G +L+A I
Sbjct: 355 TGVASAGGPEAVRVLVLKCLRAY-----NDNILQPLRDRGEGVEFEMLVGGILKAIATMI 409
Query: 342 YD 343
D
Sbjct: 410 ED 411
>gi|302896134|ref|XP_003046947.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727875|gb|EEU41234.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 462
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/391 (36%), Positives = 210/391 (53%), Gaps = 45/391 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR +RRTTLT +D+ AL+ +VEP+YG+ S PLR+ A +G + LFY++D++V+F+
Sbjct: 53 MRAARRTTLTVNDISLALRALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEK 112
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-----APVQAIAAPSNGTN---NEQKDG 110
+I APLP+ P D HWLAIEGVQP IP+N + Q + G N +
Sbjct: 113 LINAPLPKVPRDMGFTAHWLAIEGVQPSIPQNPTTSESRSQELLPKGPGANPALSALAGN 172
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPY 166
V +K VKHI+S+EL LYFDKI + + + V +Q AL S+ D GLH L+PY
Sbjct: 173 DNVAMKPSVKHIVSKELILYFDKIQAAILDDNPDEEVVRLRQAALGSVRDDPGLHQLIPY 232
Query: 167 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 226
F F+ D V+ L++ L +M + L++N + ++PY L +TCL+A++LG
Sbjct: 233 FINFIMDRVTHHLDDTFTLKQMMELTNALIENKSLFLDPYASPLSAPALTCLMARKLG-- 290
Query: 227 LAD-------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHY 279
AD ++LR A LV I ++Y L+T+LT+T L LDP + Y
Sbjct: 291 -ADEGVDAIKEQYDLRQLAASLVGQIARKYSASNTLLRTKLTRTCLKYFLDPTKPPAVLY 349
Query: 280 GAVQG-LAALGPNVVRLLLLPNLGPY-LSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAA 337
GA+ G L A GP +R+L+L NL + ++L+P L EK + + Y L+Q
Sbjct: 350 GAIHGLLEAGGPEAIRVLVLRNLKTFDTAILQP--LKEKAEGTMD-------YEMLVQGI 400
Query: 338 GQCIYDRLKIFPPLSSLPARSVWKTNGIVAT 368
Q + +SL R NG+ T
Sbjct: 401 VQAV----------ASLSERGESSVNGVNGT 421
>gi|340519130|gb|EGR49369.1| predicted protein [Trichoderma reesei QM6a]
Length = 468
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 204/367 (55%), Gaps = 41/367 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR +RRTT+T +DV ALK+ + EP+YG+ S PLR+ A +G + LFY++D++V+F+
Sbjct: 54 MRAARRTTMTVNDVSLALKVLDAEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEK 113
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSN------GTN-------- 104
+I APLP+ P D + HWLAIEGVQP IP+N P A P + G N
Sbjct: 114 LINAPLPKVPRDMNFTAHWLAIEGVQPSIPQN-PTSAELRPQDLLPKGPGANPALSALAG 172
Query: 105 NEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGL 160
N+ G P VKHI+S+EL LYFDKI + + + V +Q AL S+ D GL
Sbjct: 173 NDTGAGQPA-----VKHIVSKELILYFDKIQAAILDDNPDEEVVRLRQAALGSVRDDPGL 227
Query: 161 HPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVA 220
H LVPYF F+ D V+ L++ L +M + L++N + ++PY L V+TCL+A
Sbjct: 228 HQLVPYFINFIMDRVTHQLDDTFTLKQMMELTNALIENKSLFLDPYASSLSAPVLTCLMA 287
Query: 221 KRLGNRLADN----HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALT 276
++LG + ++LR A L+ I ++Y + L+ +LT+T L LDP +
Sbjct: 288 RKLGTDEGQDALKEQYDLRQLAASLLGRIARKYSASNSLLRPKLTRTCLKYFLDPTKPPA 347
Query: 277 QHYGAVQG-LAALGPNVVRLLLLPNLGPYLS-LLEPEMLLEKQKNEVKRHEAWRVYGALL 334
YGA+ G L A G +R+L+L NL + S +L+P L EK + ++ Y L+
Sbjct: 348 VLYGAIHGLLEAGGMEAIRVLVLRNLKSFDSGILQP--LKEKSQGSIE-------YEMLV 398
Query: 335 QAAGQCI 341
Q Q +
Sbjct: 399 QGIVQAV 405
>gi|322703194|gb|EFY94807.1| transcription initiation factor TFIID complex 60 kDa subunit
[Metarhizium anisopliae ARSEF 23]
Length = 465
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 191/338 (56%), Gaps = 36/338 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR +RRTTLT +DV ALK+ +VEP+YG+ S PLR+ A +G + LFY++D++V+F+
Sbjct: 56 MRAARRTTLTVNDVSLALKVLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEK 115
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQ----------------AIAAPSNG 102
+I APLP+ P D + HWLAIEGVQP IP+N A+AA +
Sbjct: 116 LINAPLPKVPRDMNFTAHWLAIEGVQPSIPQNPTTAESRSQELLPKGPGANPALAALAGN 175
Query: 103 TNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDS 158
N V +K VKHI+S+EL LYFDKI + + + V +Q AL S+ D
Sbjct: 176 DN--------VAVKPSVKHIVSKELILYFDKIQAAILDDNPDEEVVRLRQAALGSVRDDP 227
Query: 159 GLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCL 218
GLH LVPYF F+ D V+ L++ L +M + L++N + ++PY L +TCL
Sbjct: 228 GLHQLVPYFINFIMDRVTHHLDDTFTLRHMMELTNALIENKSLFLDPYASSLSAPALTCL 287
Query: 219 VAKRLGN----RLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRA 274
+A++LG + ++LR A LV I ++Y L+ +LT+T L LDP +
Sbjct: 288 MARKLGTDDGVDAMKDQYDLRQLAASLVGRIARKYSASNTLLRPKLTRTCLKYFLDPTKP 347
Query: 275 LTQHYGAVQG-LAALGPNVVRLLLLPNLGPY-LSLLEP 310
YGA+ G L A GP +R+L+L N+ + ++L+P
Sbjct: 348 PAVLYGAIYGLLEAGGPEAIRVLVLRNMKTFDAAILQP 385
>gi|358392554|gb|EHK41958.1| hypothetical protein TRIATDRAFT_229290 [Trichoderma atroviride IMI
206040]
Length = 468
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 135/367 (36%), Positives = 204/367 (55%), Gaps = 41/367 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR +RRTT+T +D+ AL++ + EP+YG+ S PLR+ A +G + LFY++D++V+F+
Sbjct: 54 MRAARRTTMTVNDISLALRVLDAEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEK 113
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSN------GTN-------- 104
+I APLPR P D + HWLAIEGVQP IP+N P A P + G N
Sbjct: 114 LINAPLPRVPRDMNFTAHWLAIEGVQPSIPQN-PTSAELRPQDLLPKGPGANPALSALAG 172
Query: 105 NEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGL 160
N+ G P VKHI+S+EL LYFDKI + + + + +Q AL S+ D GL
Sbjct: 173 NDTSAGQP-----SVKHIVSKELILYFDKIQAAILDDNPDEEVIRLRQAALGSVRDDPGL 227
Query: 161 HPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVA 220
H LVPYF F+ D V+ L++ L +M + L++N + ++PY L V+TCL+A
Sbjct: 228 HQLVPYFINFIMDRVTHQLDDTFTLKQMMELTNALIENKSLFLDPYASSLSAPVLTCLMA 287
Query: 221 KRLGNRLADN----HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALT 276
++LG + ++LR A L+ I ++Y + L+ +LT+T L LDP +
Sbjct: 288 RKLGTDEGQDSLKEQYDLRQLAASLLGRIARKYSASNSLLRPKLTRTCLKYFLDPTKPPA 347
Query: 277 QHYGAVQG-LAALGPNVVRLLLLPNLGPYLS-LLEPEMLLEKQKNEVKRHEAWRVYGALL 334
YGA+ G L A G +R+L+L NL + S +L+P L EK + ++ Y L+
Sbjct: 348 VLYGAIHGLLEAGGTEAIRVLVLRNLKSFDSGILQP--LKEKSEGSIE-------YEMLV 398
Query: 335 QAAGQCI 341
Q Q +
Sbjct: 399 QGLVQAV 405
>gi|342872127|gb|EGU74524.1| hypothetical protein FOXB_14969 [Fusarium oxysporum Fo5176]
Length = 463
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 128/330 (38%), Positives = 188/330 (56%), Gaps = 20/330 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR +RRTTLT +D+ ALK +VEP+YG+ S PLR+ A +G + LFY++D++V+F+
Sbjct: 54 MRAARRTTLTVNDISLALKALDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEK 113
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV-----QAIAAPSNGTN---NEQKDG 110
+I APLP+ P D HWLAIEGVQP IP+N Q + G N +
Sbjct: 114 LINAPLPKVPRDMGFTAHWLAIEGVQPSIPQNPTTSESRSQELLPKGPGANPALSALAGN 173
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRS---DSVLFKQ-ALVSLATDSGLHPLVPY 166
V +K VKHI+S+EL LYFDKI + + + V +Q AL S+ D GLH L+PY
Sbjct: 174 DNVSMKPSVKHIVSKELILYFDKIQAAVLDDNPDEEVVRLRQAALGSVRDDPGLHQLIPY 233
Query: 167 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 226
F F+ D V+ L++ L +M + L++N + ++PY L +TCL+A++LG
Sbjct: 234 FITFIMDRVTHHLDDTFTLKQMMELTNALIENKSLFLDPYASPLSAPALTCLMARKLGTD 293
Query: 227 LADN----HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAV 282
+ ++LR A LV I ++Y L+ +LT+T L LDP + YGA+
Sbjct: 294 EGTDALKEQYDLRQLAASLVGRIARKYSASNTLLRPKLTRTCLKYFLDPTKPPAVLYGAI 353
Query: 283 QG-LAALGPNVVRLLLLPNLGPYLS-LLEP 310
G L A GP +R+L+L NL + S +L+P
Sbjct: 354 HGLLEAGGPEAIRVLVLRNLQTFDSGILQP 383
>gi|346318510|gb|EGX88113.1| transcription initiation factor [Cordyceps militaris CM01]
Length = 470
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 201/371 (54%), Gaps = 41/371 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR +RRTTLT +DV AL++ + EP+YG+ S PLRF A +G + LFY+DD++VEF+
Sbjct: 54 MRAARRTTLTVNDVSLALRVLDAEPLYGYDSTRPLRFGEASMGPGQPLFYIDDEEVEFEK 113
Query: 59 VIEAPLPRAPLDTSIVC--------HWLAIEGVQPVIPEN-----APVQAIAAPSNGTNN 105
+I APLP+ P D + HWLAIEGVQP IP+N + +Q + G N
Sbjct: 114 LINAPLPKVPRDMNFTARLTAEGTAHWLAIEGVQPSIPQNPTTAESRLQDLLPKGTGANP 173
Query: 106 E-----QKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRS---DSVLFKQA-LVSLAT 156
D P VKHI+S+EL LYFDKI + + + V +QA L S+
Sbjct: 174 ALSALAGNDNAPTNPS--VKHIVSKELILYFDKIQAAILDENPDQEVVRLRQAALGSVRD 231
Query: 157 DSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 216
D GLH L PYF F+ D V+ L++ L +M + L++N + ++PY L V+T
Sbjct: 232 DPGLHQLAPYFINFIMDRVTHQLDDTFTLKQMMELTNALIENKTLFLDPYASSLSAPVLT 291
Query: 217 CLVAKRLGN----RLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPK 272
CL+A++LG + +ELR A L+ + +Y + L+ +LT+T L LDP
Sbjct: 292 CLMARKLGTDDGVDAMKDQYELRQLAASLIGRMAHKYAASNSLLRPKLTRTCLRYFLDPT 351
Query: 273 RALTQHYGAVQG-LAALGPNVVRLLLLPNLGPYLS-LLEPEMLLEKQKNEVKRHEAWRVY 330
+ YGAV G L A GP VRLL+L NL + S +L+P L EK + ++ Y
Sbjct: 352 KPPAVLYGAVNGILQAGGPEAVRLLVLRNLKSFDSGILQP--LKEKSEGSIE-------Y 402
Query: 331 GALLQAAGQCI 341
L+Q Q +
Sbjct: 403 EMLVQGLVQAV 413
>gi|313246848|emb|CBY35707.1| unnamed protein product [Oikopleura dioica]
Length = 452
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 190/326 (58%), Gaps = 27/326 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MR+++R L+ DVD AL+ R +EP+YGF S L +R A G R+L + +D++++ +
Sbjct: 52 MRNAKRARLSPRDVDSALRARRIEPLYGFTSTDYLPWRFASGGGRELHFNEDREIDLQKF 111
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGL-------- 111
+E + P I HWL I+GVQP IPEN P A P + + + + L
Sbjct: 112 LENTASKLPPPIKIRAHWLVIDGVQPNIPEN-PAPARKPPHDLSAKKLPEDLGKEDKGKD 170
Query: 112 --------------PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATD 157
+E K ++H LS E Y+ +IT+ AV R++ + K+AL SLA D
Sbjct: 171 KKNEKKPGDKGQTQALEQKPLMRHELSIEQMKYYQEITQAAVGRNEEIR-KEALNSLAED 229
Query: 158 SGLHPLVPYFTYFVADEVSRGLN--NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVV 215
+G+H ++P FT F+++ + +N N +L+ LMR+V LL NP + ++ YLH+++P V+
Sbjct: 230 TGIHAMLPRFTNFISEGIKCNINENNLALIIYLMRMVKALLDNPTLSLDMYLHEIIPVVI 289
Query: 216 TCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 275
+C+V+++L R+ +NHW LR + A+++A I K + + LQTR+ ++L L AL
Sbjct: 290 SCVVSRQLCQRIGENHWALRQYAARVLAQISKNFTTTTSMLQTRIVQSLQKPLDRRDAAL 349
Query: 276 TQHYGAVQGLAALGPNVVRLLLLPNL 301
Q YG++ GL+ LG +V + +++P L
Sbjct: 350 AQIYGSIVGLSELGSDVTKKIIIPRL 375
>gi|116199019|ref|XP_001225321.1| hypothetical protein CHGG_07665 [Chaetomium globosum CBS 148.51]
gi|88178944|gb|EAQ86412.1| hypothetical protein CHGG_07665 [Chaetomium globosum CBS 148.51]
Length = 451
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 185/325 (56%), Gaps = 36/325 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR + RTTLT DV +ALK+ +VEP+YG+ S PLR+ A +G + LFY+DD++V+F+
Sbjct: 54 MRAANRTTLTVQDVSQALKVLDVEPLYGYESTRPLRYGEASLGPGQPLFYIDDEEVDFEK 113
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENA-----------PVQAIAAPSNGTNNEQ 107
VI APLP+ P D S HWLA+EGVQP IP+N P A P+ G+ Q
Sbjct: 114 VINAPLPKVPRDMSFTAHWLAVEGVQPSIPQNPTTAETSSKDLLPKGPGANPALGSPRGQ 173
Query: 108 KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYF 167
+ L + Q + T+ +R L + AL S+ +D GLH L+PYF
Sbjct: 174 RQRLVPAVG-----------QTRHQQRTDTEKTR----LREAALESVRSDPGLHQLLPYF 218
Query: 168 TYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL 227
F+ ++V+ L++ +L +M + ++QNP++ ++PY L V+TCL++++LG
Sbjct: 219 VNFITNQVTHHLDDLFVLRQMMELAEAVIQNPNLFLDPYASALSAPVLTCLMSRKLGGAA 278
Query: 228 AD-------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 280
AD + LR+ A L+ + ++YG L+ +LT+T L LDP R L +G
Sbjct: 279 ADEGSDTLREQYGLRELAAGLLEMVARKYGATNALLRPKLTRTCLKHFLDPTRPLAVLFG 338
Query: 281 AVQGLAAL-GPNVVRLLLLPNLGPY 304
A++G+AA GP VR+L+LPNL +
Sbjct: 339 AIRGVAASGGPEAVRVLVLPNLKSF 363
>gi|313234616|emb|CBY10571.1| unnamed protein product [Oikopleura dioica]
Length = 452
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 190/326 (58%), Gaps = 27/326 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MR+++R L+ DVD AL+ R +EP+YGF S L +R A G R+L + +D++++ +
Sbjct: 52 MRNAKRARLSPRDVDSALRARRIEPLYGFTSTDYLPWRFASGGGRELHFNEDREIDLQKF 111
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGL-------- 111
+E + P I HWL I+GVQP IPEN P A P + + + + L
Sbjct: 112 LENTAIKLPPPVKIRAHWLVIDGVQPNIPEN-PAPARKPPHDLSAKKLPEDLGKEDKGKD 170
Query: 112 --------------PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATD 157
+E K ++H LS E Y+ +IT+ AV R++ + K+AL SLA D
Sbjct: 171 KKNEKKPGDKGQTQALEQKPLMRHELSIEQMKYYQEITQAAVGRNEEIR-KEALNSLAED 229
Query: 158 SGLHPLVPYFTYFVADEVSRGLN--NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVV 215
+G+H ++P FT F+++ + +N N +L+ LMR+V LL NP + ++ YLH+++P V+
Sbjct: 230 TGIHAMLPRFTNFISEGIKCNINENNLALIIYLMRMVKALLDNPTLSLDMYLHEIIPVVI 289
Query: 216 TCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRAL 275
+C+V+++L R+ +NHW LR + A+++A I K + + LQTR+ ++L L AL
Sbjct: 290 SCVVSRQLCQRIGENHWALRQYAARVLAQISKNFTTTTSMLQTRIVQSLQKPLDRRDAAL 349
Query: 276 TQHYGAVQGLAALGPNVVRLLLLPNL 301
Q YG++ GL+ LG +V + +++P L
Sbjct: 350 AQIYGSIVGLSELGSDVTKKIIIPRL 375
>gi|412986365|emb|CCO14791.1| predicted protein [Bathycoccus prasinos]
Length = 647
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 127/360 (35%), Positives = 179/360 (49%), Gaps = 65/360 (18%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLR-FRRAIGYRDLFYLDDKDVEFKDVI 60
+ SRR LTT+D++ AL++R EP+YGF S P + F + G D+FY D++++ ++
Sbjct: 56 KRSRRNVLTTEDINAALRIRMCEPLYGFPSNMPSQEFVKVKGTNDVFYTYDEELDVNKLL 115
Query: 61 EAPLP------------------------RAPLDTSIVCHWLAIEGVQPVIPENAPVQAI 96
PLP LD+ I A E + + A +
Sbjct: 116 SEPLPPPSIAINVVPHWLAIDGVQPLIPENPSLDSQIYYQERAKEREETLAKAKAKKPTV 175
Query: 97 AAP------------SNGTNNEQKDG-----------------LPVEIKLPVKHILSREL 127
P E+K+G PV V+H+LSREL
Sbjct: 176 TGPPPLPSATEGGEKGGDEAGEKKEGDAQQHLQQQQQKEQGKFAPV-----VQHVLSREL 230
Query: 128 QLYFDKITEL-----AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY 182
Q+YFD+IT L + + L A+ +L TD+GL L+PYF F++ EV L N
Sbjct: 231 QVYFDRITALLRGGGGANDEERGLLNAAIGTLQTDAGLANLIPYFAKFISTEVQTNLRNL 290
Query: 183 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLADNHWELRDFTAKL 241
L A+MR + L+QNP +E YLHQLMPSV+TC+VAKRL N DNHW+LR +K
Sbjct: 291 RKLLAMMRAIEALVQNPTANLELYLHQLMPSVLTCIVAKRLSENPEKDNHWQLRVLASKT 350
Query: 242 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
VA IC+ YG Y TLQ R+T TL L + L +GA+ GL++LGP V+ ++ P L
Sbjct: 351 VAEICECYGEEYATLQPRVTATLQKGLKATQSPLPTIFGALVGLSSLGPRVIETVVCPEL 410
>gi|312071628|ref|XP_003138696.1| hypothetical protein LOAG_03111 [Loa loa]
gi|307766142|gb|EFO25376.1| hypothetical protein LOAG_03111 [Loa loa]
Length = 616
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 185/319 (57%), Gaps = 26/319 (8%)
Query: 3 HSRRTTLTTDDVDEALKLRNVEPVYGFA--SGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
H RR +T +D+D AL + P++GF G P RF ++G RDLF DD+DVE V+
Sbjct: 85 HGRRKRVTAEDIDSALAMDGYPPLFGFTVKEGLPFRFAGSMG-RDLFVTDDRDVEITPVV 143
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-AP--------VQAIAAPSNGTN----NEQ 107
AP + PL+T+I HWL I+GVQP +PEN AP V AI + T ++
Sbjct: 144 NAPAAKLPLETNIKSHWLVIDGVQPAVPENPAPVVQKETPVVVAIEKATVDTGLSILSKA 203
Query: 108 KDGL----PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPL 163
GL V+IK H LS E Q++F +ITE A+ SD +AL SL TD+GL L
Sbjct: 204 HRGLQQTEQVQIKTTSTHALSVEQQVFFKEITE-AIMGSDDTRRTEALYSLQTDAGLQQL 262
Query: 164 VPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 221
+P F+ + + V + +N ++L LMR++ +L NP + +E LH+L+PSV++C++++
Sbjct: 263 LPRFSVAIVEGVRCNIVQHNLAILIYLMRMIQSLANNPALSLERCLHELLPSVLSCILSR 322
Query: 222 RLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 280
+L R DNHW LR+F+++L+A IC+ Y + L++R+T+ L D L YG
Sbjct: 323 QLCARPETDNHWALREFSSRLLANICRSYK--ISHLRSRVTQVLAQVWRDENCTLAALYG 380
Query: 281 AVQGLAALGPNVVRLLLLP 299
++ L LG + V +++P
Sbjct: 381 SLYALNELGVDTVHSVVIP 399
>gi|403216405|emb|CCK70902.1| hypothetical protein KNAG_0F02370 [Kazachstania naganishii CBS
8797]
Length = 555
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 195/396 (49%), Gaps = 101/396 (25%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYG---------------------FASGGPLRFRR- 39
RHS+ LTTDD+ +AL++ NVEP+YG F G P FR+
Sbjct: 56 RHSKTEILTTDDIAKALRVLNVEPLYGYHDSVTAKNGTHNTAHGTAQSFQEGQP-SFRKV 114
Query: 40 -AIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-------- 90
G + ++YLD+++V+F ++ PLP P + HWLAIEGVQP I +N
Sbjct: 115 NTSGGQQVYYLDEEEVDFDKLVNKPLPPLPRLPTFTTHWLAIEGVQPAILQNPNLNDIRT 174
Query: 91 --------APVQAI------------AAPSNGTN-----------------NEQKDGLPV 113
A V A+ +A +NG + K G +
Sbjct: 175 SLPPTTRGAIVTALNESNSLQTQPNASATTNGNGAAGTLQQQQREQHQLLASSVKPGQNI 234
Query: 114 EIKLPVKHILSRELQLYFDKIT------ELAVSRSDSVLFK-QALVSLATDSGLHPLVPY 166
E+K VKH+LS+ELQ+YF+KI + A D+ K AL SL TD+GLH LVPY
Sbjct: 235 EVKPLVKHVLSKELQIYFNKIISALTVKDEATDDGDAQHMKLAALTSLKTDNGLHQLVPY 294
Query: 167 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-- 224
F F+A++++ L+N LL ++ ++++LL NP I +EPY+H LMPS++T L+AK LG
Sbjct: 295 FIQFIAEQITHNLSNLELLTTILEMIYSLLSNPSIFLEPYIHSLMPSILTLLLAKNLGGS 354
Query: 225 -----------------------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
N D LRDF A L+ + K++ VY +L+ R+T
Sbjct: 355 SNGKGSPPATAGSTTAPPSIEEYNEQLDKANALRDFAASLLDYVLKKFPQVYKSLKPRVT 414
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+TLL LD R +YG+++G+ L +R L
Sbjct: 415 RTLLKTFLDTNRVFGTYYGSLKGVTVLESESIRFFL 450
>gi|320589938|gb|EFX02394.1| transcription initiation factor tfiid complex subunit [Grosmannia
clavigera kw1407]
Length = 535
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 191/368 (51%), Gaps = 68/368 (18%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR RTTLT D+ AL++ +VEP+YG+ S PLR+ A +G + LFY++D++VEF+
Sbjct: 59 MRAGGRTTLTVQDMSLALRVLDVEPLYGYESTRPLRYGEASLGPGQPLFYVEDEEVEFER 118
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIA-----APSNGTNNEQKDGLP- 112
++ APLPR P D S+ HWLAIEGVQP IP+N P A A P N L
Sbjct: 119 LVNAPLPRVPRDASLTAHWLAIEGVQPAIPQN-PTTAEARSQELVPKGPGANPALAALAG 177
Query: 113 ---VEIKLPVKHILSRELQLYFDKITELAVSRS-DSVLFK---QALVSLATDSGLHPLVP 165
V K +KHI+S EL LYFDKI + + D + + AL S+ +D GLH LVP
Sbjct: 178 NDNVGFKPAIKHIISNELVLYFDKIQAAVLDDNPDEEVLRLRDAALDSVRSDPGLHQLVP 237
Query: 166 YFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKR--- 222
YF F+A++++ +++ L M + L+ NPH+ ++PY L V+TCLVA+R
Sbjct: 238 YFVNFIANQITHRMDDVFALRRTMELTSALVANPHLFLDPYASPLCAPVLTCLVARRLGG 297
Query: 223 -----------------LG-----------------NRLADNH--------------WEL 234
LG N + +H + L
Sbjct: 298 LGAGSGAGGSGPGGVGDLGSDSGHNDSHSINGIHATNGINGSHTVHGLLPDSIVRETYLL 357
Query: 235 RDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVV 293
R+ A L+ + +++ H L+ +LT+T L LL+P R YGAV GLAA GP V
Sbjct: 358 RELAASLLGQLARKFAHSNALLRPKLTRTCLKVLLEPSRPAPVLYGAVCGLAAAGGPEAV 417
Query: 294 RLLLLPNL 301
R+L+LPNL
Sbjct: 418 RVLVLPNL 425
>gi|389629410|ref|XP_003712358.1| transcription initiation factor TFIID subunit 6 [Magnaporthe oryzae
70-15]
gi|351644690|gb|EHA52551.1| transcription initiation factor TFIID subunit 6 [Magnaporthe oryzae
70-15]
Length = 512
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 189/347 (54%), Gaps = 37/347 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR + RTTLT D +A K+ +VEP+YG+ S PLR+ A +G + LFY+DD++V+F+
Sbjct: 78 MRAANRTTLTVQDTSQAFKVLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIDDEEVDFEK 137
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-----APVQAIAAPSNGTN---NEQKDG 110
+I APLP+ P D S HWLA+EGVQP IP+N + Q + G N N
Sbjct: 138 LINAPLPKVPRDMSFTAHWLAVEGVQPSIPQNPTTAESRAQELIPKGPGANPALNALAGN 197
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRS--DSV--LFKQALVSLATDSGLHPLVPY 166
+ VK I+S+EL LYFDKI + + + V L AL S+ D GLH LVPY
Sbjct: 198 DNLAFHPAVKQIISKELVLYFDKIQAAVLDDTPDEEVVRLRNAALASVRNDPGLHQLVPY 257
Query: 167 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 226
F F+A++V+ L++ + +M + L+ N ++ ++PY L V+T L+++++G
Sbjct: 258 FANFIANQVTHRLDDTFTVRQMMELTAALVDNSNLFLDPYAGPLSAPVLTALMSRKIGAS 317
Query: 227 LADNHWE---------------------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLL 265
+ + E LR+F A L+ I +Y L+++LT+T L
Sbjct: 318 TSTSKQEEGSGSGNSSSVNREALREQFLLREFAASLLGKIAIKYTRANRHLRSKLTRTCL 377
Query: 266 NALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNLGPY-LSLLEP 310
LLDP + +GA+ GLAA GP R+L+LPNL + +L+P
Sbjct: 378 KYLLDPTKPAPVLFGALNGLAAAGGPEAFRILVLPNLREFDTGMLQP 424
>gi|402080997|gb|EJT76142.1| transcription initiation factor TFIID subunit 6 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 527
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 191/362 (52%), Gaps = 52/362 (14%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR + RTTLT D +A K+ +VEP+YG+ S PLR+ A +G + LFY+DD++V+F+
Sbjct: 70 MRAANRTTLTVQDTSQAFKVLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIDDEEVDFEK 129
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA----PSNGTNNEQKDGLPVE 114
+I APLP+ P D S HWLA+EGVQP IP+N A P N L
Sbjct: 130 LINAPLPKVPRDMSFTAHWLAVEGVQPSIPQNPTTAESRAQELIPKGPGANPALSALAGN 189
Query: 115 IKL----PVKHILSRELQLYFDKITELAVSRS----DSVLFKQALVSLATDSGLHPLVPY 166
L VK I+S+EL LYFDKI + S + L + AL S+ TD GLH LVPY
Sbjct: 190 DNLAFHPAVKQIISKELVLYFDKIQAAVLDDSPDEETARLREAALESVRTDPGLHQLVPY 249
Query: 167 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL--- 223
F F+A++V+ L++ L +M + L+ NPH+ ++PY L V+T L+++++
Sbjct: 250 FANFIANQVTHRLDDTFTLRMMMELTAALVDNPHLFLDPYAGPLSAPVLTALMSRKIGGG 309
Query: 224 -----------------GNRL----------------ADNHWELRDFTAKLVAAICKRYG 250
G+ + + + LR+F A L+ I +Y
Sbjct: 310 GASAPTAAAAPAPTASNGSGMDVDGAVAAPAAPPADPIHDQFLLREFAASLLGRIATKYT 369
Query: 251 HVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNLGPY-LSLL 308
L+++LT+T L LLDP + YGA+ GLAA GP R+L+LPNL + ++L
Sbjct: 370 RANKHLRSKLTRTCLKYLLDPTKPPAVLYGALNGLAAAGGPEAFRVLVLPNLKSFDAAVL 429
Query: 309 EP 310
+P
Sbjct: 430 QP 431
>gi|440465447|gb|ELQ34767.1| transcription initiation factor TFIID subunit 6 [Magnaporthe oryzae
Y34]
gi|440487666|gb|ELQ67441.1| transcription initiation factor TFIID subunit 6 [Magnaporthe oryzae
P131]
Length = 511
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 189/347 (54%), Gaps = 37/347 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR + RTTLT D +A K+ +VEP+YG+ S PLR+ A +G + LFY+DD++V+F+
Sbjct: 77 MRAANRTTLTVQDTSQAFKVLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIDDEEVDFEK 136
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-----APVQAIAAPSNGTN---NEQKDG 110
+I APLP+ P D S HWLA+EGVQP IP+N + Q + G N N
Sbjct: 137 LINAPLPKVPRDMSFTAHWLAVEGVQPSIPQNPTTAESRAQELIPKGPGANPALNALAGN 196
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRS--DSV--LFKQALVSLATDSGLHPLVPY 166
+ VK I+S+EL LYFDKI + + + V L AL S+ D GLH LVPY
Sbjct: 197 DNLAFHPAVKQIISKELVLYFDKIQAAVLDDTPDEEVVRLRNAALASVRNDPGLHQLVPY 256
Query: 167 FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 226
F F+A++V+ L++ + +M + L+ N ++ ++PY L V+T L+++++G
Sbjct: 257 FANFIANQVTHRLDDTFTVRQMMELTAALVDNSNLFLDPYAGPLSAPVLTALMSRKIGAS 316
Query: 227 LADNHWE---------------------LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLL 265
+ + E LR+F A L+ I +Y L+++LT+T L
Sbjct: 317 TSTSKQEEGSGSGNSSSVNREALREQFLLREFAASLLGKIAIKYTRANRHLRSKLTRTCL 376
Query: 266 NALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNLGPY-LSLLEP 310
LLDP + +GA+ GLAA GP R+L+LPNL + +L+P
Sbjct: 377 KYLLDPTKPAPVLFGALNGLAAAGGPEAFRILVLPNLREFDTGMLQP 423
>gi|324508063|gb|ADY43409.1| Transcription initiation factor TFIID subunit 6 [Ascaris suum]
Length = 628
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 181/320 (56%), Gaps = 27/320 (8%)
Query: 3 HSRRTTLTTDDVDEALKLRNVEPVYGFAS--GGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
H RR L DD+D+AL R P +GF++ G P R + G RDLF DD+D++ ++
Sbjct: 93 HGRRKRLVADDIDDALASRGRPPQFGFSAKEGLPFRLIGSTG-RDLFVTDDRDIDLAAIV 151
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPEN--------APVQAIAAPSNGTN-------- 104
AP + PLD +I HWL I+G QP +PEN V +IA + +
Sbjct: 152 NAPPAKVPLDATIKAHWLVIDGEQPAVPENPTPILEEDPTVTSIAEGAEAIDFGPTILSQ 211
Query: 105 --NEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHP 162
+ V+IK H LS E Q++F +ITE A+ SD +AL SL TD+G+
Sbjct: 212 AGRTVRKTEQVQIKTMTTHALSVEQQIFFKEITE-AIMGSDDARRTEALHSLQTDAGIQV 270
Query: 163 LVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVA 220
L+P F+ +A+ V + +N ++L LMR++ +L NP + ++ LH+L+PS+++C+++
Sbjct: 271 LLPRFSLAIAEGVRCNIVHHNLAILIYLMRMIQSLASNPALNLDRCLHELLPSILSCILS 330
Query: 221 KRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHY 279
K+L R DNHW LR+F+++L++ IC+ Y N L++R+T+ L + L+ Y
Sbjct: 331 KQLCARPDTDNHWALREFSSRLLSTICRSYN--VNGLRSRVTQVLTRVWRNEHCTLSTLY 388
Query: 280 GAVQGLAALGPNVVRLLLLP 299
G++ L LG + +R +++P
Sbjct: 389 GSLYALNELGVDTIRAVVIP 408
>gi|432101286|gb|ELK29512.1| Transcription initiation factor TFIID subunit 6 [Myotis davidii]
Length = 611
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 174/305 (57%), Gaps = 37/305 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
I PLPR PLD VC + AP +QK E P+
Sbjct: 118 INTPLPRVPLD---VC--------------------LKAP----KEQQK----AEATEPL 146
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
K + + K + +D +AL S+ATD GL+ ++P F+ F+++ V +
Sbjct: 147 KSAKPGQEEDGPLKSKGQGAAPADGK--GEALQSIATDPGLYQMLPRFSTFISEGVRVNV 204
Query: 180 --NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRD 236
NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R DNHW LRD
Sbjct: 205 VQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRD 264
Query: 237 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 296
F A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA LG +V++ L
Sbjct: 265 FAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTL 324
Query: 297 LLPNL 301
+LP L
Sbjct: 325 ILPRL 329
>gi|322694809|gb|EFY86629.1| transcription initiation factor TFIID complex 60 kDa subunit
[Metarhizium acridum CQMa 102]
Length = 487
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 202/390 (51%), Gaps = 65/390 (16%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR +RRTTLT +DV ALK+ +VEP+YG+ S PLR+ A +G + LFY++D++V+F+
Sbjct: 56 MRAARRTTLTVNDVSLALKVLDVEPLYGYDSTRPLRYGEASLGPGQPLFYIEDEEVDFEK 115
Query: 59 VIEAPLPRAPLD-----------------TSIV-----CHWLAIEGVQPVIPENAPVQ-- 94
+I APLP+ P D TS + HWLAIEGVQP IP+N
Sbjct: 116 LINAPLPKVPRDMNFTGTLPVITITWMSLTSFILYKKTAHWLAIEGVQPSIPQNPTTAES 175
Query: 95 --------------AIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVS 140
A+AA + N V +K VKHI+S+EL LYFDKI +
Sbjct: 176 RSQELLPKGPGANPALAALAGNDN--------VAVKPSVKHIVSKELILYFDKIQAAILD 227
Query: 141 RS---DSVLFKQA-LVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLL 196
+ + V +QA L S+ D GLH LVPYF F+ D V+ L++ L +M + L+
Sbjct: 228 DNPDEEVVRLRQAALGSVRDDPGLHQLVPYFINFIMDRVTHHLDDTFTLRQMMELTNALI 287
Query: 197 QNPHIQIEPYLHQLMPSVVTCLVAKRLGN----RLADNHWELRDFTAKLVAAICKRYGHV 252
+N + ++PY L +TCL+A++LG + ++LR A LV I ++Y
Sbjct: 288 ENKSLFLDPYASSLSAPALTCLMARKLGTDDGVDAMKDQYDLRQLAASLVGRIARKYSAS 347
Query: 253 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQG-LAALGPNVVRLLLLPNLGPYLSLLEPE 311
L+ +LT+T L LDP + YGA+ G L A GP +R+L+L N+ + S
Sbjct: 348 NTLLRPKLTRTCLKYFLDPTKPPAVLYGAIYGLLEAGGPEAIRVLVLRNMKTFDS----- 402
Query: 312 MLLEKQKNEVKRHEAWRVYGALLQAAGQCI 341
+L+ K +R E Y L+Q Q +
Sbjct: 403 AILQPMK---ERSEGSIEYEMLVQGLVQAV 429
>gi|440494317|gb|ELQ76716.1| Transcription initiation factor TFIID, subunit TAF6, partial
[Trachipleistophora hominis]
Length = 389
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 171/307 (55%), Gaps = 12/307 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M S+RT L+ DDV+ AL RNV+P++G+ L F+ I +FY+ D++V+ +D +
Sbjct: 70 MLFSKRTKLSIDDVNNALVTRNVDPIFGYDPKDNLIFKNDIVKSAIFYVPDEEVDLEDFL 129
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
PLP+ PL I HWLAIEGVQP IP+N + + PS + E+K K
Sbjct: 130 NQPLPKMPLKPKITSHWLAIEGVQPQIPQNPII--MEKPSLKQDPLVTYTEESELKQTTK 187
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
H++S+ELQLY++KI L A+ L T+SG+ L+PY + +++ + +
Sbjct: 188 HVISKELQLYYEKILSFLEDNEKITL---AIECLKTESGIQQLIPYLIQNINEKILKNME 244
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
+ LL + +LLQN HI I+PYLHQ++PS++TC++ KR+ N ++R A+
Sbjct: 245 S-DLLSNFILFYHSLLQNEHIFIDPYLHQIIPSLLTCIIGKRVKN------VDIRKLAAE 297
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
+ + +Y Y+TL R+ KTL LD ++ HY A+ L+ L NVV ++L
Sbjct: 298 TIKYVYDKYAITYDTLGPRIIKTLTKVWLDKDKSEDAHYSALFTLSILSRNVVSSVILKE 357
Query: 301 LGPYLSL 307
Y+ +
Sbjct: 358 KDGYVEM 364
>gi|297287994|ref|XP_002803267.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Macaca mulatta]
Length = 636
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 172/339 (50%), Gaps = 80/339 (23%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M +R LTT D+D ALKL+NVE ++G
Sbjct: 58 MHMGKRQKLTTSDIDYALKLKNVEVIWG-------------------------------- 85
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI---------------- 96
D HWL+IEG QP IPEN P +A
Sbjct: 86 ---------DRQGAAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPL 136
Query: 97 ------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSV 145
A ++G E+K +G P+ +K H LS E QLY+ +ITE V ++
Sbjct: 137 KGKGQGATAADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAK 196
Query: 146 LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQI 203
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +
Sbjct: 197 -RAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYL 255
Query: 204 EPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTK 262
E Y+H+L+P+V+TC+V+++L R DNHW LRDF A+LVA ICK + N +Q+R+TK
Sbjct: 256 EKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITK 315
Query: 263 TLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
T + +D K T YG++ GLA LG +V++ L+LP L
Sbjct: 316 TFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRL 354
>gi|323333660|gb|EGA75053.1| Taf6p [Saccharomyces cerevisiae AWRI796]
Length = 335
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 171/304 (56%), Gaps = 57/304 (18%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVE 55
RHS+R LTTDDV +AL++ NVEP+YG+ G + F + G + ++YLD+++V+
Sbjct: 19 RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVD 78
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN------------------------- 90
F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 79 FDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDN 138
Query: 91 ---APVQAIAAPSNGTN-------NEQKDGLPVEIKLPVKHILSRELQLYFDKI--TELA 138
PV + A ++ T+ + K G E+K VKH+LS+ELQ+YF+K+ T A
Sbjct: 139 SLQTPVTSTTASASVTDTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTLTA 198
Query: 139 VSRSDSV---LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNL 195
S++D + + AL SL TDSGLH LVPYF F+A+++++ L++ LL ++ ++++L
Sbjct: 199 KSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSL 258
Query: 196 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-----------LRDFTAKLVAA 244
L N I ++PY+H LMPS++T L+AK+LG D+ + LRDF A L+
Sbjct: 259 LSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDY 318
Query: 245 ICKR 248
+ K+
Sbjct: 319 VLKK 322
>gi|207345395|gb|EDZ72230.1| YGL112Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 432
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 170/307 (55%), Gaps = 51/307 (16%)
Query: 42 GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN----------- 90
G + ++YLD+++V+F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 19 GGQSVYYLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQP 78
Query: 91 -----------------APVQAIAAPSNGTN-------NEQKDGLPVEIKLPVKHILSRE 126
PV + A ++ T+ + K G E+K VKH+LS+E
Sbjct: 79 PFIRGAIVTALNDNSLQTPVTSTTASASVTDTGASQHLSNVKPGQNTEVKPLVKHVLSKE 138
Query: 127 LQLYFDKI--TELAVSRSDSV---LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN 181
LQ+YF+K+ T A S++D + + AL SL TDSGLH LVPYF F+A+++++ L++
Sbjct: 139 LQIYFNKVISTLTAKSQADEAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNLSD 198
Query: 182 YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-------- 233
LL ++ ++++LL N I ++PY+H LMPS++T L+AK+LG D+ +
Sbjct: 199 LQLLTTILEMIYSLLSNTSIFLDPYIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLER 258
Query: 234 ---LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP 290
LRDF A L+ + K++ Y +L+ R+T+TLL LD R +YG ++G++ L
Sbjct: 259 TNALRDFAASLLDYVLKKFPQAYKSLKPRVTRTLLKTFLDINRVFGTYYGCLKGVSVLEG 318
Query: 291 NVVRLLL 297
+R L
Sbjct: 319 ESIRFFL 325
>gi|395330883|gb|EJF63265.1| TAF-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 481
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 173/341 (50%), Gaps = 42/341 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDL------FYLDDKDV 54
MRH++RTTLTT D+D+AL++ N+EP+YG P FRRA+ + + ++++D+++
Sbjct: 63 MRHAKRTTLTTADIDQALRVLNIEPLYGHFPHNPPAFRRALPFPQMQTAGSVYFVEDEEI 122
Query: 55 EFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQA------IAAPSNGTNNE-- 106
EF VI P S HWLA+EGVQP+IPEN P AA GT N
Sbjct: 123 EFDRVIREEKISMPKGVSWTAHWLAVEGVQPLIPENPPAAPREIDPDSAAAKTGTANGVS 182
Query: 107 -----------------QKDGLPVEIKLPVKHILSRELQLYFDKIT-ELAVSRSDSVLFK 148
Q + + VK LSRELQLY+ ++T L SD
Sbjct: 183 GSVFPLTPPSSDRPSPIQSSKQTQQQNILVKQTLSRELQLYYTRLTSSLLPPTSDPAKRT 242
Query: 149 QALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS-------LLFALMRVVWNLLQNPHI 201
AL SL D+GL PL+ Y ++V + V L S LL + V+ LL N +
Sbjct: 243 AALASLRHDAGLSPLLSYLVHWVGEGVVNTLRGGSQTETDGKLLEVYLDVIAALLDNQTL 302
Query: 202 QIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+EPYLHQ++PSV + L+ L N LR A+++A + Y Y L T++
Sbjct: 303 GVEPYLHQILPSVFSILLYSSLP---PSNAIHLRTTAAQILAHLLTHYSMTYPGLPTKIV 359
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG 302
KTL+ L+D K++ H GA++GL A+G +R L+ G
Sbjct: 360 KTLIVGLIDNKKSRATHEGAIRGLMAIGKEALRQGLVNRSG 400
>gi|393242954|gb|EJD50470.1| TAF-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 504
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 176/330 (53%), Gaps = 23/330 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI----GYRDLFYLDDKDVEF 56
MRHSRRTTLTT D+D+AL++ N+EP+YG + FRRA G +++++D +++F
Sbjct: 62 MRHSRRTTLTTGDIDQALRVLNIEPLYGHNTHTHPPFRRAHVMVPGQAPVYFVEDTEIDF 121
Query: 57 KDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP------VQAIA-APSNGTNNEQKD 109
V+ P + HWLA+EGVQP+IPEN P IA P+ T +
Sbjct: 122 DKVLHEEKVFLPKPVTWTAHWLAVEGVQPMIPENPPQAKTDAASGIAKVPAAPTAARKTG 181
Query: 110 GLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTY 169
K +H+LSRELQLY++++T + SDS AL SL D+GL L+PY
Sbjct: 182 TGAAAKKAAARHVLSRELQLYYNRLTTSLLPPSDSSKRTAALASLRMDAGLQALLPYLVR 241
Query: 170 FVADEVSRGL--------NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK 221
+V + V L +N L ++ V+ LL N + +EPYLHQ++P V++ L+
Sbjct: 242 WVGERVVHCLKSPGSTEADNGRTLEVMLDVLHALLDNAALFVEPYLHQMLPPVLSALLTS 301
Query: 222 RLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGA 281
L R A++VA + + Y +L RLTKTLL ALL ++ GA
Sbjct: 302 SLPAN--SRSSATRAHAAQIVARLLTTHSTTYPSLAPRLTKTLLVALLARGKSAGTREGA 359
Query: 282 VQGLAALGPNVVRLLLLPNLGPYLSLLEPE 311
V+GLA +G VR+ L+ G L+LL E
Sbjct: 360 VRGLAGIGKEAVRMGLVDAGG--LTLLAQE 387
>gi|297739130|emb|CBI28781.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 181 bits (459), Expect = 8e-43, Method: Composition-based stats.
Identities = 82/102 (80%), Positives = 95/102 (93%)
Query: 248 RYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSL 307
R+GHVYN QT+LT+TLL+A LDPKR++TQHYGA+QGLAALGPN+VRLL++PNL PYL L
Sbjct: 20 RFGHVYNNQQTQLTETLLHAFLDPKRSMTQHYGAIQGLAALGPNMVRLLVVPNLEPYLRL 79
Query: 308 LEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFP 349
LEPEMLLEKQKNE+KRHEAWRVYGALL+A GQ IYDRLK+FP
Sbjct: 80 LEPEMLLEKQKNEIKRHEAWRVYGALLRAIGQSIYDRLKMFP 121
>gi|449329892|gb|AGE96160.1| transcription initiation factor TFIId70kDa subunit [Encephalitozoon
cuniculi]
Length = 356
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 175/309 (56%), Gaps = 24/309 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M S+RT L+ DD++ AL RNV+P++G+ L FR +++Y+ D++++ ++ +
Sbjct: 47 MVGSKRTKLSIDDINYALTSRNVDPLFGYDPQESLVFRGLPS--NVYYVPDEEIDLEEYL 104
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV---QAIAAPSN-GTNNEQKDGLPVEIK 116
+ PLP+ PL SI HWLAIEGVQP IP N P+ + +A GT E+ E+K
Sbjct: 105 DRPLPKVPLRVSIQSHWLAIEGVQPQIPYN-PILLEKPVAKKDTLGTYQEE-----AELK 158
Query: 117 LPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVS 176
KH+L++EL +YFDK+ + S + A+ L +SG+ LVPYF + +++
Sbjct: 159 SQNKHMLTKELSMYFDKVIQAMESDEQT-----AMECLHNESGIQQLVPYFVHHFNEQIV 213
Query: 177 RGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRD 236
+ + N L ++ V +LL+N +I ++PYLHQ++PS++TC++ K + + ++R
Sbjct: 214 KNIKNKEKLMTVVMVYSSLLKNKYIFVDPYLHQILPSLITCVIGKNVDD-------DVRK 266
Query: 237 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 296
A +V + + Y TL R+ TL A LD ++ + YGA+ L+ L +VV +
Sbjct: 267 VAADVVKYVFSNFSSSYKTLAPRIINTLSKAWLDREKTESTQYGALLCLSILSKHVVETV 326
Query: 297 LLPNLGPYL 305
+ P Y+
Sbjct: 327 IKPKADYYV 335
>gi|303391124|ref|XP_003073792.1| transcription initiation factor TFIID subunit TAF6 [Encephalitozoon
intestinalis ATCC 50506]
gi|303302940|gb|ADM12432.1| transcription initiation factor TFIID subunit TAF6 [Encephalitozoon
intestinalis ATCC 50506]
Length = 356
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 177/309 (57%), Gaps = 24/309 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M S+RT L+ DD++ AL RNV+P++G+ L FR +++Y+ D++++ ++ +
Sbjct: 47 MVGSKRTKLSIDDINYALISRNVDPLFGYDPQESLVFRGLPS--NVYYVPDEEIDLEEYL 104
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV---QAIAAPSN-GTNNEQKDGLPVEIK 116
+ PLP+ PL SI HWLAIEGVQP IP N P+ + +A GT E+ E+K
Sbjct: 105 DRPLPKIPLRPSIQSHWLAIEGVQPQIPYN-PILLEKPVAKKDTLGTYQEE-----AELK 158
Query: 117 LPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVS 176
+H+L++EL +YFDK+ + A+ + + A+ L +SG+ LVPYF + +++
Sbjct: 159 SQNRHMLTKELSMYFDKVIQ-AMETDEEI----AMECLHNESGIQQLVPYFIHHFNEQIV 213
Query: 177 RGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRD 236
+ + N L +M V +LL+N +I I+PYLHQ++PS++TC++ K + + E+R
Sbjct: 214 KNIKNKEKLMTVMMVYNSLLRNKYIFIDPYLHQILPSLITCVIGKSVDD-------EVRR 266
Query: 237 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 296
A +V + + Y TL R+ TL A LD ++ + YGA+ L+ L +VV +
Sbjct: 267 VAADVVKYVFSNFSSSYKTLAPRIINTLSKAWLDKEKTESTQYGALLCLSLLSKHVVETV 326
Query: 297 LLPNLGPYL 305
+ P Y+
Sbjct: 327 VKPKADYYV 335
>gi|19074721|ref|NP_586227.1| TRANSCRIPTION INITIATION FACTOR TFIID 70kDa SUBUNIT
[Encephalitozoon cuniculi GB-M1]
gi|19069363|emb|CAD25831.1| TRANSCRIPTION INITIATION FACTOR TFIID 70kDa SUBUNIT
[Encephalitozoon cuniculi GB-M1]
Length = 356
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 175/309 (56%), Gaps = 24/309 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M S+RT L+ DD++ AL RNV+P++G+ L FR +++Y+ D++++ ++ +
Sbjct: 47 MVGSKRTKLSIDDINYALTSRNVDPLFGYDPQESLVFRGLPS--NVYYVPDEEIDLEEYL 104
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV---QAIAAPSN-GTNNEQKDGLPVEIK 116
+ PLP+ PL SI HWLAIEGVQP IP N P+ + +A GT E+ E+K
Sbjct: 105 DRPLPKVPLRVSIQSHWLAIEGVQPQIPYN-PILLEKPVAKKDTLGTYQEE-----AELK 158
Query: 117 LPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVS 176
KH+L++EL +YFDK+ + S + A+ L +SG+ LVPYF + +++
Sbjct: 159 SQNKHMLTKELGMYFDKVIQAMESDEQT-----AMECLHNESGIQQLVPYFVHHFNEQIV 213
Query: 177 RGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRD 236
+ + N L ++ V +LL+N +I ++PYLHQ++PS++TC++ K + + ++R
Sbjct: 214 KNIKNKEKLMTVVMVYSSLLKNKYIFVDPYLHQILPSLITCVIGKNVDD-------DVRK 266
Query: 237 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 296
A +V + + Y TL R+ TL A LD ++ + YGA+ L+ L +VV +
Sbjct: 267 VAADVVKYVFSNFSSSYKTLAPRIINTLSKAWLDREKTESTQYGALFCLSILSKHVVETV 326
Query: 297 LLPNLGPYL 305
+ P Y+
Sbjct: 327 IKPKADYYV 335
>gi|170595735|ref|XP_001902499.1| Transcription initiation factor TFIID subunit 6 [Brugia malayi]
gi|158589796|gb|EDP28652.1| Transcription initiation factor TFIID subunit 6, putative [Brugia
malayi]
Length = 284
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 158/275 (57%), Gaps = 33/275 (12%)
Query: 3 HSRRTTLTTDDVDEALKLRNVEPVYGFA--SGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
H RR +T +D+D A L P++GF G P RF ++G RDLF DD+D+E V+
Sbjct: 12 HGRRKRVTAEDIDSAFALGGYPPLFGFTVKEGLPFRFAGSMG-RDLFVTDDRDIEITPVV 70
Query: 61 EAPLPRAPLDTSIVC---------HWLAIEGVQPVIPEN-APV-QAIAAPSNGTNNEQKD 109
AP + PL+T+I C HWL I+GVQP +PEN APV Q AA T D
Sbjct: 71 NAPAAKLPLETNIKCKCKNNFVSAHWLVIDGVQPAVPENPAPVVQKEAAVVVATEKAAVD 130
Query: 110 -GLP--------------VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSL 154
GL V+IK H LS E Q++F +ITE A+ SD +AL SL
Sbjct: 131 TGLSILSKACRGLRQTEQVQIKTTSTHALSVEQQVFFKEITE-AIMGSDDTRRTEALYSL 189
Query: 155 ATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMP 212
TD+GL L+P F+ + + V + +N ++L LMR++ +L NP + +E LH+L+P
Sbjct: 190 QTDAGLQQLLPRFSVVIVEGVRCNIVQHNLAILIYLMRMIQSLANNPALSLERCLHELLP 249
Query: 213 SVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAIC 246
S+++C+++++L R DNHW LR+F+++L+A IC
Sbjct: 250 SILSCILSRQLCARPETDNHWALREFSSRLLANIC 284
>gi|396082306|gb|AFN83916.1| transcription initiation factor TFIID subunit TAF6 [Encephalitozoon
romaleae SJ-2008]
Length = 356
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 178/309 (57%), Gaps = 24/309 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M S+RT L+ DD++ AL RNV+P++G+ L FR +++Y+ D++++ ++ +
Sbjct: 47 MVGSKRTKLSIDDINYALISRNVDPLFGYDPQESLVFRGLPS--NVYYVPDEEIDLEEYL 104
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV---QAIAAPSN-GTNNEQKDGLPVEIK 116
+ PLP+ PL SI HWLAIEGVQP IP N P+ + +A GT E+ E+K
Sbjct: 105 DRPLPKIPLRPSIQSHWLAIEGVQPQIPYN-PILLEKPVAKKDTLGTYQEE-----AELK 158
Query: 117 LPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVS 176
+H+L++EL +YFDK+ + A+ + + A+ L +SG+ LVPYF + +++
Sbjct: 159 SQNRHMLTKELGMYFDKVIQ-AMETDEQI----AMECLHNESGIQQLVPYFVHHFNEQIM 213
Query: 177 RGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRD 236
+ + N L ++ V +LL+N +I I+PYLHQ++PS++TC++ K + + E+R
Sbjct: 214 KNIKNKERLMTVIMVYNSLLRNKYIFIDPYLHQVLPSLITCVIGKSVDD-------EVRR 266
Query: 237 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 296
A +V + + Y TL R+ TL A LD ++ + YGA+ L++L +VV +
Sbjct: 267 VAADVVKYVFSNFSGSYKTLAPRIINTLSKAWLDKEKTESTQYGALLCLSSLSKHVVETV 326
Query: 297 LLPNLGPYL 305
+ P Y+
Sbjct: 327 IKPKTDYYV 335
>gi|345568553|gb|EGX51446.1| hypothetical protein AOL_s00054g145 [Arthrobotrys oligospora ATCC
24927]
Length = 450
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 185/352 (52%), Gaps = 24/352 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI--GYRDLFYLDDKDVEFKD 58
M+ S RTTL T D++ A KL +++P G+ S LR+ A + LFY++D++V+F+
Sbjct: 48 MKESGRTTLYTKDLEMAAKLLDIDPPLGYQSNLGLRWGEATLGAGQPLFYIEDEEVDFEK 107
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-----------APVQAIAAPSNGTNNEQ 107
VI A LP+ P + ++ HW AIEGVQP +P N P A A + G
Sbjct: 108 VINASLPKVPREVTMTAHWTAIEGVQPQVPMNPSPAEARMNELVPRGATTAHALGAAGNS 167
Query: 108 KDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYF 167
+ +K KHILS ELQ++FDK+ + L AL +L T+ +H L+PYF
Sbjct: 168 DNA---TVKPAAKHILSVELQMFFDKVISSVIDYEKDDLRSAALSALRTEPAIHQLLPYF 224
Query: 168 TYFVADEVSRGLN-NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 226
+V + V+ + L+ ++M + ++ N + ++ Y+ +L P ++TC V K LG
Sbjct: 225 VSYVTERVTHDQKVDIKLMESMMDICDAMIDNESLFMDLYVEKLCPPILTCAVGKYLGPN 284
Query: 227 LADN--HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG 284
D + LR ++ + YG +TL++RL ++ L LD K++ HYG++ G
Sbjct: 285 TQDQIPTFPLRRKAVSILRKLAINYGESSHTLRSRLGRSFLKRFLDNKQSYGSHYGSILG 344
Query: 285 LAAL-GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQ 335
LA + G + +R+LLLPN+ + + E+ Q + ++ EA L++
Sbjct: 345 LANMGGTDSIRVLLLPNVKLFEEFIRDEI----QGDGPRKAEALECLKVLVE 392
>gi|429964403|gb|ELA46401.1| hypothetical protein VCUG_02123 [Vavraia culicis 'floridensis']
Length = 360
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 173/309 (55%), Gaps = 12/309 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M S+RT L+ DDV+ AL RNV+P++G+ L F+ I +FY+ D++++ +D++
Sbjct: 46 MLFSKRTKLSIDDVNNALTTRNVDPIFGYDPKDNLVFKNDIVKSAIFYVPDEEIDLEDLL 105
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
P P+ PL I HWLAIEGVQP IP+N + + PS + E+K K
Sbjct: 106 NQPPPKMPLKPKITSHWLAIEGVQPQIPQNPII--MEKPSLKQDPLVTYTEESELKQTTK 163
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
H++S+ELQLY++KI DS A+ L T+SG+ L+PY + +++ + +
Sbjct: 164 HVISKELQLYYEKILSFL---EDSEKITLAIECLKTESGIQQLIPYLIQNINEKILKNME 220
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
+ +L + +LLQN HI I+PYLHQ++PS++TC++ KR+ N ++R A+
Sbjct: 221 S-EVLSNFILFYHSLLQNEHIFIDPYLHQIIPSLLTCIIGKRIKN------MDIRKLAAE 273
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
+ + +Y Y+TL R+ KTL LD ++ HY A+ L+ L NV+ ++
Sbjct: 274 TIKYVYDKYSITYDTLGPRIIKTLSKVWLDKDKSEDAHYAALFTLSILSTNVISSVIQKE 333
Query: 301 LGPYLSLLE 309
Y+ +++
Sbjct: 334 KDRYVEMVK 342
>gi|401827789|ref|XP_003888187.1| transcription initiation factor TFIID subunit TAF6 [Encephalitozoon
hellem ATCC 50504]
gi|392999387|gb|AFM99206.1| transcription initiation factor TFIID subunit TAF6 [Encephalitozoon
hellem ATCC 50504]
Length = 356
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 177/308 (57%), Gaps = 24/308 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M S+RT L+ DD++ AL RNV+P++G+ L FR +++Y+ D++++ ++ +
Sbjct: 47 MVGSKRTKLSIDDINYALISRNVDPLFGYDPQESLVFRGLPS--NVYYVPDEEIDLEEYL 104
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV---QAIAAPSN-GTNNEQKDGLPVEIK 116
+ PLP+ PL SI HWLAIEGVQP IP N P+ + +A GT E+ E+K
Sbjct: 105 DRPLPKIPLRPSIQSHWLAIEGVQPQIPYN-PILLEKPVAKKDTLGTYQEE-----AELK 158
Query: 117 LPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVS 176
+H+L++EL +YFDK+ + A+ + + A+ L +SG+ LVPYF + +++
Sbjct: 159 SQNRHMLTKELSMYFDKVIQ-AMETDEQI----AMECLHNESGIQQLVPYFVHHFNEQIM 213
Query: 177 RGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRD 236
+ + N L ++ V +LL+N +I I+PYLHQ++PS++TC++ K + + E+R
Sbjct: 214 KNIKNKEKLMTVIMVYNSLLRNKYIFIDPYLHQVLPSLITCVIGKSVDD-------EVRR 266
Query: 237 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 296
+ +V + + Y TL R+ TL A LD ++ + YGA+ L++L +VV +
Sbjct: 267 VASDVVKYVFSNFSGSYKTLAPRIINTLSKAWLDKEKTESTQYGALLCLSSLSKHVVETV 326
Query: 297 LLPNLGPY 304
+ P Y
Sbjct: 327 IKPKADYY 334
>gi|196004760|ref|XP_002112247.1| hypothetical protein TRIADDRAFT_56085 [Trichoplax adhaerens]
gi|190586146|gb|EDV26214.1| hypothetical protein TRIADDRAFT_56085 [Trichoplax adhaerens]
Length = 1444
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 181/338 (53%), Gaps = 46/338 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MRHS+R LT +D+D ALK +++EPVYGF S + FR A G R +F+ +DK+ D+
Sbjct: 53 MRHSKRDKLTRNDIDLALKFKSIEPVYGFTSRDFVPFRYASGGGRSIFFQEDKEFNLTDL 112
Query: 60 IEA-PLPRAPLDTSIVCHWLAIEGVQPVIPEN-----------------------APVQA 95
I + + PLD HWL+I+G QP+IPEN V A
Sbjct: 113 IASQEASKVPLDNHTRAHWLSIDGTQPLIPENPDPDTLHKFKRLSSDDSLDDFIPKKVPA 172
Query: 96 IAAPSNGTNN---EQKDGLPVEIKLPVK-------------HILSRELQLYFDKITELAV 139
+ + S N E+K G V+ K V+ H LS E QL+F +ITE V
Sbjct: 173 LFSLSFQDNKLIVEKKAGKEVKSKEKVEDTSKASFLKPLSGHELSLEQQLFFREITEACV 232
Query: 140 SRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY--SLLFALMRVVWNLLQ 197
S S+ K+AL L D GL+ L+P F+ F+++ V ++ ++L L+R++ +LLQ
Sbjct: 233 SNSEEKR-KKALECLQYDPGLYQLLPRFSRFISEGVRANIHETEDAVLIYLLRMMDSLLQ 291
Query: 198 NPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAIC--KRYGHVYNT 255
N + +E YLH+L+P+ ++C+V K++ + +N ++ + A L+ IC K Y N
Sbjct: 292 NETLNLEKYLHELIPTALSCVVNKQIASEDPNNRLVIQHYAASLIYKICSNKIYNSPVNN 351
Query: 256 LQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVV 293
+Q+R+T+T+ NAL + L +YGA+ + L N V
Sbjct: 352 VQSRITQTMANALQEESLPLHTYYGAIYLMIKLCSNDV 389
>gi|361130087|gb|EHL01941.1| putative Transcription initiation factor TFIID subunit 6 [Glarea
lozoyensis 74030]
Length = 338
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 148/273 (54%), Gaps = 38/273 (13%)
Query: 72 SIVCHWLAIEGVQPVIPEN-----------APVQAIAAPS----NGTNNEQKDGLPVEIK 116
S HWLA+EGVQP IP+N P A PS G +N V K
Sbjct: 2 SFTAHWLAVEGVQPSIPQNPTTGEARAGELVPKGPGANPSLAALAGNDN-------VAFK 54
Query: 117 LPVKHILSRELQLYFDKITELAVSRSDS-----VLFKQALVSLATDSGLHPLVPYFTYFV 171
VKH+LS+EL L+FDKI A+ D L A S+ D GLH LVPYF F+
Sbjct: 55 PLVKHVLSKELILFFDKI-RAAILDDDPDPEVVSLRASAFASVRADPGLHQLVPYFVQFI 113
Query: 172 ADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN- 230
+++V+ LNN +L +M + ++ NP + I PY+ L+P V+TCLV + LG A+N
Sbjct: 114 SEKVTHSLNNTFVLRQMMELATAMINNPSLFINPYVTALVPPVLTCLVGRNLGPEPANNL 173
Query: 231 --HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
++LRD A L+ I K+Y L+ RLT+T L LDP R L +HYGA+ GL+ +
Sbjct: 174 QEQYQLRDHAASLIGQISKKYAESSMQLRPRLTRTCLKYFLDPSRTLGEHYGAINGLSTI 233
Query: 289 -GPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNE 320
GP V+R +LLPN+ P+ E +L K NE
Sbjct: 234 GGPEVIRSILLPNVKPF------EYVLTKAINE 260
>gi|392566107|gb|EIW59283.1| transcription initiation factor TFIID complex subunit [Trametes
versicolor FP-101664 SS1]
Length = 487
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 181/342 (52%), Gaps = 44/342 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDL------FYLDDKDV 54
MRH++RTTLTT DVD+AL++ N+EP+YG P FRRA+ + + ++++D+++
Sbjct: 63 MRHAKRTTLTTADVDQALRVLNIEPLYGHFPYNPPTFRRALPFPQMPSAGPVYFIEDEEI 122
Query: 55 EFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV-------------QAIAAPSN 101
EF + P + HWLA+EGVQP+IPEN P Q ++ ++
Sbjct: 123 EFDRALREEKVTLPKGVTWTAHWLAVEGVQPLIPENPPAVPRDIDPESAAAKQGLSTSAS 182
Query: 102 GT-------NNEQKDGLPVEIKLP-----VKHILSRELQLYFDKIT-ELAVSRSDSVLFK 148
G+ ++++ + + P VK +LSRELQLY+ ++T L SD
Sbjct: 183 GSIFPPTPPSSDRPSPIQASKQQPQQHIAVKQVLSRELQLYYTRLTSSLLPPSSDFAKRA 242
Query: 149 QALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS-------LLFALMRVVWNLLQNPHI 201
AL SL D+GL PL+PY +V V L + S +L L+ V+ LL N +
Sbjct: 243 AALASLRHDAGLSPLLPYLVRWVGQGVVDALRSGSQNETDGKVLDVLLDVIGALLDNQTL 302
Query: 202 QIEPYLHQLMPSVVTCLVAKRLGNRLADNH-WELRDFTAKLVAAICKRYGHVYNTLQTRL 260
+EPYLHQL+PS+ + L L + L +H LR+ A++++ + Y Y L +R+
Sbjct: 303 GVEPYLHQLLPSIFSIL----LHSALPPSHAAHLRNTAAQILSHLLTHYSTTYPGLSSRI 358
Query: 261 TKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG 302
KTL+ L+ ++ + GA++GL +G VR L+ + G
Sbjct: 359 VKTLIVGLIGEGKSRSTREGAIRGLMGIGKEAVRQGLVKHHG 400
>gi|336378238|gb|EGO19397.1| hypothetical protein SERLADRAFT_364083 [Serpula lacrymans var.
lacrymans S7.9]
Length = 473
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 178/335 (53%), Gaps = 36/335 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDL------FYLDDKDV 54
MRH RRTT+TT D+D+AL++ N+EP+YG S P FRRA+ + L ++++D+++
Sbjct: 61 MRHGRRTTMTTSDIDQALRVLNIEPLYGHNSFNPPAFRRALPFPQLPTVGPVYFVEDEEI 120
Query: 55 EFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV-------QAIAA--------- 98
+F V+ P + HWLA+EGVQP+IPEN P Q +
Sbjct: 121 DFDRVLREEKITVPKGVNWTAHWLAVEGVQPLIPENPPAIPRDTDQQEVTKSPPISNTGF 180
Query: 99 ----PSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSL 154
PS+ + N+++ + + VK +LSRELQLY+ ++T + SD AL SL
Sbjct: 181 PPTPPSDRSTNKKQQQQQQQQQQLVKQVLSRELQLYYTRLTTSLLPPSDFAKRTAALASL 240
Query: 155 ATDSGLHPLVPYFTYFVADEVSRGL-------NNYSLLFALMRVVWNLLQNPHIQIEPYL 207
D+GL L+PY +V + V L N+ +L ++ VV +L+N + IEPYL
Sbjct: 241 RHDAGLQALLPYLIRWVGESVVNALKDSSDSDNDGKVLEVMLHVVSAILENSALFIEPYL 300
Query: 208 HQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNA 267
HQ++P +++ L+ L A LR ++ ++ + ++ Y +L R+ KTLL A
Sbjct: 301 HQILPPILSTLLHSFLPPSYAT---LLRTMASQTLSRLLTQHSTTYPSLSPRIMKTLLLA 357
Query: 268 LLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG 302
L+ P ++ GA++GL +G VR L+ G
Sbjct: 358 LISPDKSKNTREGAIRGLIGIGKEAVRKGLVEGGG 392
>gi|393213433|gb|EJC98929.1| TAF-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 484
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 172/341 (50%), Gaps = 44/341 (12%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRD------LFYLDDKDVE 55
RH+RRTT+TT D+D+AL++ N+EP+YG A P FRRA+ + +++++D++++
Sbjct: 61 RHARRTTMTTSDIDQALRVLNIEPLYGHAPHNPPTFRRALPFPSAPTAGPVYFVEDEEID 120
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQA-------IAA------PSNG 102
F V+ P S HWLA+EGVQP +PEN P IA+ P NG
Sbjct: 121 FDRVLREEKITLPKPASYTAHWLAVEGVQPNVPENPPAAERRDAEPDIASAKLSTPPRNG 180
Query: 103 TNNEQKDGLPVE---------IKLPVKHILSRELQLYFDKITELAVSRS-----DSVLFK 148
T P +L VK +LSRELQLY+ ++T + + D
Sbjct: 181 TQFPPTPPSPSRNASFNSTKPNQLLVKQVLSRELQLYYTRLTSTLMPPTLMPPADDTRKA 240
Query: 149 QALVSLATDSGLHPLVPYFTYFVADEV-------SRGLNNYSLLFALMRVVWNLLQNPHI 201
AL SL D+GL L+PY +V D V + N+ L + V+ LL N +
Sbjct: 241 AALSSLRNDAGLQTLLPYLVKWVGDGVIAILRDTNHSENDGRALEVYLEVIGALLDNSTL 300
Query: 202 QIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLT 261
+EPYLHQ++P +++ L L L N LR ++ ++ + ++ Y +L R+
Sbjct: 301 FVEPYLHQMLPPLLSIL----LHTSLPSNSTHLRIMASQTLSHLLTQHSTTYPSLSPRIM 356
Query: 262 KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG 302
KTLL ALL P ++ GAV+GL +G VR L+ G
Sbjct: 357 KTLLLALLSPGKSKGTREGAVRGLIGVGKEAVRKGLVEGGG 397
>gi|387594002|gb|EIJ89026.1| transcription initiation factor TFIID 70kda subunit [Nematocida
parisii ERTm3]
gi|387595796|gb|EIJ93419.1| transcription initiation factor TFIID 70kda subunit [Nematocida
parisii ERTm1]
Length = 381
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 176/321 (54%), Gaps = 22/321 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M ++R+ L+ +DV+ AL + ++P+ G+ + L F+ G +L+Y+ D++++ + ++
Sbjct: 47 MMAAKRSKLSIEDVNYALLSKEIDPLLGYNTSNSLVFKTIPG-SNLYYVPDEELDLESIL 105
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-APVQAI-AAPSNGTNNEQKDGLPVEIKLP 118
+PLP+ P I HWLAIEGVQP IP+N P++ + T K+ +EI+
Sbjct: 106 NSPLPKIPHKPVISKHWLAIEGVQPQIPQNPLPMERMPEIKKEDTLAAMKED--IEIRNH 163
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
+KH+LS+ELQLY++KI + + L + L +SG+ L+PYF +F +E+ +
Sbjct: 164 MKHLLSKELQLYYEKIVQFIKDKETVALASECL---KNESGIQQLIPYFVHFFNEEILKN 220
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR---------LAD 229
L N L ++ V +L+ N I IEPY+HQ++PS++TC+V K +G + D
Sbjct: 221 LRNGDYLVDIISVYESLIMNKMIFIEPYMHQMLPSLLTCVVGKSIGIMHKHPSEEVLVND 280
Query: 230 NHWELRDFTAKLVAAICKRYGH-----VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQG 284
+ + +A+ A+I +Y + Y TL R+ TLL D ++ HYGA+
Sbjct: 281 SDEDTPGLSARRRASITIKYIYDTYSLSYTTLAPRVLNTLLKTWADSTKSPESHYGAIYC 340
Query: 285 LAALGPNVVRLLLLPNLGPYL 305
L LG V+ +++ YL
Sbjct: 341 LCNLGEKVINGVVIQFKKEYL 361
>gi|299743831|ref|XP_001836008.2| transcription initiation factor TFIID complex 60 kDa subunit
[Coprinopsis cinerea okayama7#130]
gi|298405837|gb|EAU85784.2| transcription initiation factor TFIID complex 60 kDa subunit
[Coprinopsis cinerea okayama7#130]
Length = 485
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 177/346 (51%), Gaps = 47/346 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRD------LFYLDDKDV 54
MRH RRTT+TT D+D AL++ N+EP+YG FRRA+ Y +++++D+++
Sbjct: 62 MRHGRRTTMTTSDIDNALRVLNIEPLYGHTPYNTATFRRALPYPQTQNAGPVYFVEDEEI 121
Query: 55 EFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-VQAIAAPSNGTNNEQKDGLPV 113
+F V+ P + HWLA+EGVQP+IPEN P + AP G GLP
Sbjct: 122 DFDRVLREEKITLPKGVTWTAHWLAVEGVQPLIPENPPAIPREVAPEAGAAAPDGVGLPT 181
Query: 114 -----EIKLPVKHIL------------------------SRELQLYFDKITE-LAVSRSD 143
E ++ +L SRELQLY+ ++T L SD
Sbjct: 182 LAAKKEPQINGGGLLGNTPAAANSKLTQQQQQQLVKQVLSRELQLYYARLTTALLPPTSD 241
Query: 144 SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL-------NNYSLLFALMRVVWNLL 196
AL SL +D+GL L+PY +VA+ V L N+ +L LM VV +L
Sbjct: 242 FAKRTAALASLRSDAGLQALLPYLVRWVAEGVVGALKDGTQTENDGKVLEVLMDVVSAIL 301
Query: 197 QNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTL 256
+N + +EPYLHQL+P +++ L+ L + + +LR A+ ++ + ++ Y +L
Sbjct: 302 ENKTLFVEPYLHQLLPPILSTLLHSSLPH---SHSTQLRTSAAQTLSRLLTQHSTTYPSL 358
Query: 257 QTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG 302
R+ KTLL AL+ P ++ GAV+GL A+G VR L+ + G
Sbjct: 359 SPRIMKTLLLALISPGKSKGTREGAVRGLVAVGKEAVRKGLVESGG 404
>gi|429963235|gb|ELA42779.1| hypothetical protein VICG_00094 [Vittaforma corneae ATCC 50505]
Length = 353
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFY-LDDKDVEFKDV 59
M S RT L DV+ AL RNVEP++G+ S L FR G FY + D++++ ++
Sbjct: 47 MVVSHRTKLNIGDVNNALISRNVEPLFGYDSNDTLVFR---GLPSGFYCVPDEEIDLEEY 103
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-APVQAIAAPSNGTNNEQKDGLPVEIKLP 118
+E PLP+ PL + HWLAIEGVQP I +N ++ AA + + Q+D +E+K
Sbjct: 104 LEKPLPKIPLKPYVQSHWLAIEGVQPPIQQNPILIEKPAAKQDSLSMYQED---LELKQQ 160
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
KH+L++EL +YF+KI + + ++ A+ L ++G+ LVPYF + + +
Sbjct: 161 NKHLLTKELSMYFEKILQTMETDPET-----AISCLLNETGIQQLVPYFLHHFKLVIRKN 215
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 238
N LL ++++ +LL+N +I I+PYLH+++P +++C+V K + E R
Sbjct: 216 FENDELLAVIVKMYGSLLKNKYIFIDPYLHEILPPLLSCVVGKSISE-------EARRLA 268
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
L+ I + Y +L +R+ LL LD + + YGA+ L+ L NV++ ++
Sbjct: 269 TDLIKYIFDVFSPKYKSLPSRIVSFLLKGWLDDSKPESVQYGALFCLSILSDNVIKECVV 328
Query: 299 PNLGPYLS 306
PN+ Y S
Sbjct: 329 PNIEKYTS 336
>gi|378756081|gb|EHY66106.1| transcription initiation factor TFIID 70kda subunit [Nematocida sp.
1 ERTm2]
Length = 384
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 169/323 (52%), Gaps = 24/323 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M S+R+ L+ +DV+ AL + ++P+ G+ + L F+ G +L+Y+ D++++ + ++
Sbjct: 47 MIASKRSKLSIEDVNYALLSKEIDPLLGYNTSNSLMFKSIPG-SNLYYVPDEELDLESIL 105
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-APVQAI-AAPSNGTNNEQKDGLPVEIKLP 118
+PLP+ P I HWLAIEGVQP IP+N P++ + T K+ +EI+
Sbjct: 106 TSPLPKIPQKPVISKHWLAIEGVQPQIPQNPLPMERMPEIKKEDTLAAMKED--IEIRNH 163
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
+KH+LS+ELQLY++KI + + + + L +SG+ L+PYF +F +E+ +
Sbjct: 164 MKHLLSKELQLYYEKIVQFIKEKETVSIASECL---KNESGIQQLIPYFVHFFNEEILKN 220
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK------RLGNRLADNH- 231
L N L ++ V +L+ N I IEPY+HQ++PS++TC+V K R G R D
Sbjct: 221 LRNGEYLVDIITVYESLIMNKMIFIEPYMHQMLPSLLTCVVGKSIGLDSRDGARAEDGAG 280
Query: 232 ---------WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAV 282
R + + I Y Y TL R+ TLL D + HYGA+
Sbjct: 281 STANEDAPGLSARRRASATIKHIYDTYSLSYTTLAPRVLNTLLKTWADGAKTPESHYGAI 340
Query: 283 QGLAALGPNVVRLLLLPNLGPYL 305
L LG VV +++ YL
Sbjct: 341 YCLCNLGEKVVNGVVVQFKDEYL 363
>gi|384485548|gb|EIE77728.1| hypothetical protein RO3G_02432 [Rhizopus delemar RA 99-880]
Length = 220
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 136/219 (62%), Gaps = 18/219 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IGYRDLFYLDDKDVEFKDV 59
MRHS+RT LT +D++ AL+++NVEP+YG+ G +FR+ + D+++ DD++++F V
Sbjct: 1 MRHSKRTKLTVEDINAALRVKNVEPLYGYMQGDSPKFRKTTVNSTDVYFDDDEEIDFDTV 60
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-APVQAIA----------APSNGTNNEQK 108
+ PLP+ PLD + HWLAIEGVQP IP+N P A A A SNG +Q
Sbjct: 61 LNKPLPKIPLDVTFTAHWLAIEGVQPAIPQNPTPNDAKAELLSKRNKTHASSNGITTDQ- 119
Query: 109 DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFT 168
V +K VKH+LS+ELQ+YF++ITE A+ + L QA SL D GLH L+PYF
Sbjct: 120 ----VNVKPLVKHVLSKELQMYFERITE-AILNDNERLQSQAFESLRLDPGLHQLLPYFV 174
Query: 169 YFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYL 207
+ +V++ N +L A++ + LL N H+ IEPY+
Sbjct: 175 QHIHKKVAQNHKNLDILEAMLSMAHALLNNKHLFIEPYV 213
>gi|402468109|gb|EJW03308.1| hypothetical protein EDEG_00217 [Edhazardia aedis USNM 41457]
Length = 356
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 166/309 (53%), Gaps = 19/309 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M S RT L+ DDV+ AL RN++P++G+ PL F+ + FY+ D + + +D +
Sbjct: 47 MHASHRTKLSIDDVNYALIARNIDPLFGYDPSEPLNFKNI---NNFFYIPDDECDIEDYL 103
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-APVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
PLP+ P + S+ HWLAIEGVQP IP+N P + + ++ ++ VEIK
Sbjct: 104 NRPLPKLPPNPSVHAHWLAIEGVQPQIPQNPLPAENKYKAQDVLHSYMEE---VEIKANP 160
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTY-FVADEVSRG 178
+ ILS+ELQ+YFDKI + S AL L D G+ L+PYF F VS+
Sbjct: 161 RLILSKELQMYFDKINKYIEGSSKETTL--ALDCLENDCGIQQLIPYFIQSFSETLVSKN 218
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 238
+ + ++ +++ LL+N I I+PYLHQ++P+++T ++ + R+ +
Sbjct: 219 STDKREI--IIAMLFALLKNKFIFIDPYLHQIVPALLTGILGSNFSH-------STREIS 269
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
+ + + +R+ + YN+L R+ TL LD + Y AV+ L+ LG V+ ++
Sbjct: 270 STALVYLYERFSNTYNSLAPRIINTLKKYWLDQSKCEDTQYHAVKTLSLLGKTVIDDIIT 329
Query: 299 PNLGPYLSL 307
N Y+SL
Sbjct: 330 KNANFYVSL 338
>gi|388578780|gb|EIM19117.1| TAF-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 464
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 170/322 (52%), Gaps = 25/322 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGF--ASGGPLRFRRAIGYRDLFYLDDKDVEFKD 58
M+HS+RT L D++ ALK+ N+EP+Y A+ P R A +F L+DK+++F+
Sbjct: 58 MKHSKRTALLPCDIENALKVLNIEPLYSPHPATSIPTYRRVATPAGPVFALEDKEIDFEK 117
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN------------APVQAIAAPSNGTNNE 106
+ PLPR S HWLAIEGVQP+IP+N AP QA +N
Sbjct: 118 ALREPLPRLSKGPSYTSHWLAIEGVQPLIPQNPAPTDNGPMHQLAPAQAALNNNNNNGAG 177
Query: 107 QKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSV--LFKQALVSLATDSGLHPLV 164
I PVKH+LS ELQLY+ ++T +S + +V + AL SL D GL LV
Sbjct: 178 VGGTASTTIHPPVKHLLSHELQLYYIRLTSALLSPATNVPEAREAALASLRGDPGLGGLV 237
Query: 165 PYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG 224
PY F ++VS L+N ++ A++ VV +L+ N + IEPYLHQ++P ++T L+
Sbjct: 238 PYLVRFAGEKVSTNLSNLDIIDAMVGVVHSLIDNQTLFIEPYLHQILPLLLTTLLTSSYP 297
Query: 225 NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQ------- 277
LR +A L+A + Y + Y TL R+ KTL AL + L +
Sbjct: 298 APPDQKALWLRQKSASLIARLLNDYSNSYPTLSGRVAKTLFKALSGDDQVLGESASTDIG 357
Query: 278 -HYGAVQGLAALGPNV-VRLLL 297
+G+V GL A+G N VR L+
Sbjct: 358 TRFGSVLGLKAIGKNTAVRALI 379
>gi|355723132|gb|AES07793.1| TAF6 RNA polymerase II, TATA box binding protein -associated
factor, 80kDa [Mustela putorius furo]
Length = 484
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 128/196 (65%), Gaps = 4/196 (2%)
Query: 109 DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFT 168
+G P+ +K H LS E QLY+ +ITE V ++ +AL S+ATD GL+ ++P F+
Sbjct: 8 EGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAK-RAEALQSIATDPGLYQMLPRFS 66
Query: 169 YFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR 226
F+++ V + NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R
Sbjct: 67 TFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLR 126
Query: 227 L-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGL 285
DNHW LRDF A+LVA ICK + N +Q+R+TKT + +D K T YG++ GL
Sbjct: 127 PDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGL 186
Query: 286 AALGPNVVRLLLLPNL 301
A LG +V++ L+LP L
Sbjct: 187 AELGHDVIKTLILPRL 202
>gi|291231878|ref|XP_002735891.1| PREDICTED: TAF6-like RNA polymerase II-like [Saccoglossus
kowalevskii]
Length = 459
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 170/343 (49%), Gaps = 39/343 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+HS+R +T++D + ALK +VEP+YG+ S P+ FR +L++++DK++
Sbjct: 56 MKHSKRRKMTSEDFNRALKWMDVEPIYGYGSQDPMLFRTTKD-AELYFMEDKEIN----- 109
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
LP +D I P A + S G N +
Sbjct: 110 ---LPEISMDGKI--------------PVCAGKTTVRGKSFGFKNH------------LS 140
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
+ LS +L Y + +T+ A+ +D + K AL L T+S + L+PY FV+ V + +
Sbjct: 141 YTLSEDLVKYHENVTK-AILGNDEDIMKVALDDLRTNSKVSSLLPYLIQFVSVGVKKVNH 199
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFT 238
+ L LM +V +L+ NP + + PYL +L+ SV+ C++ N L D HW LRD+
Sbjct: 200 DLGQLTKLMHIVMSLIYNPFVYLGPYLKRLVSSVMYCIMEPLAASINPLND-HWTLRDYA 258
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
A+L+A ICK Y N L+ +L LLD R L HYGA+ GL ALGP + +LL
Sbjct: 259 ARLLAHICKTYNSSVNHLKNQLYAAFQEVLLDHARPLCSHYGAIVGLMALGPKAIEDVLL 318
Query: 299 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCI 341
P L Y L + N + + +VYGA+L AA + +
Sbjct: 319 PQLSGYWPTLMVVLEDTSLSNIQVKTDGHKVYGAILLAANKML 361
>gi|409079193|gb|EKM79555.1| hypothetical protein AGABI1DRAFT_74664, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 490
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 176/346 (50%), Gaps = 55/346 (15%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDL-------------- 46
MRH RRTTLT+ D+D AL+ N+EP+YG +R+A+ + +
Sbjct: 60 MRHGRRTTLTSSDIDLALRTLNIEPLYGHLPFSQPSYRKALPFPQMNQPGSSQPSAAGPV 119
Query: 47 FYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPS------ 100
++++D++++F+ V+ P S HWLA+EGVQP+IPEN P P+
Sbjct: 120 YFVEDEEIDFERVMREEKVMLPKGVSWTAHWLAVEGVQPLIPENPPAVPREEPTAAGETK 179
Query: 101 -NGT---------------NNEQKDG-LP----VEIKLPVKHILSRELQLYFDKITELAV 139
NGT QK G LP + VK +LSRELQLY+ ++T +
Sbjct: 180 VNGTLTSVPAATGAAGLLPGGGQKHGALPNASSAQSANLVKQVLSRELQLYYTRLTSSLL 239
Query: 140 SRSDSVLFKQ----ALVSLATDSGLHPLVPYFTYFVADEVSRGL-------NNYSLLFAL 188
S+++ + AL SL D+GL L+PY +V + V+ L + +L L
Sbjct: 240 PPSNTLDYTTKKAAALASLRHDAGLQALLPYLVRWVGEGVAGVLKTGKQDDGDGKVLEVL 299
Query: 189 MRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKR 248
M VV LL+N + +EPYLHQL+P +++ L+ L L+ +LR ++ ++ + +
Sbjct: 300 MDVVSALLENKTLFVEPYLHQLLPPILSTLLHSSLPAALST---QLRVCASQTLSRVLTQ 356
Query: 249 YGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVR 294
+ Y +L R+ KTLL AL+ P ++ GAV+GL +G VR
Sbjct: 357 HSTTYPSLSPRIMKTLLLALISPGKSRGTREGAVRGLMGVGKEAVR 402
>gi|403413034|emb|CCL99734.1| predicted protein [Fibroporia radiculosa]
Length = 565
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 181/339 (53%), Gaps = 41/339 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRD------LFYLDDKDV 54
MRH+RRTT+TT D+D+AL++ N+EP+YG + P FRRA+ + +++++D+++
Sbjct: 151 MRHARRTTMTTSDIDQALRVLNIEPLYGHSPHNPPTFRRALPHSQAPSAGPVYFVEDEEI 210
Query: 55 EFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV--------QA--IAAPSNGT- 103
+F ++ P HWLA+EGVQP+IPEN P QA +A+P+ GT
Sbjct: 211 DFDRILREEKLTIPKGPRWTAHWLAVEGVQPLIPENPPAIPKDTDLDQAGRLASPTRGTV 270
Query: 104 -----------NNEQKDGLPVEIKLPVKHILSRELQLYFDKITE--LAVSRSDSVLFKQA 150
+ Q + +L VK +LSRELQLY+ ++T L + SD A
Sbjct: 271 FPLTPPSSDRPSPAQATRKQSQQQL-VKQVLSRELQLYYTRLTSALLPPTTSDYAKRTAA 329
Query: 151 LVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS-------LLFALMRVVWNLLQNPHIQI 203
L SL D+GL L+PY +V + V L + +L L+ V+ LL N + +
Sbjct: 330 LASLRNDAGLQALLPYLVRWVGEGVVGALKGAAQSEGDGRVLEVLLDVIGALLDNTTLFV 389
Query: 204 EPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKT 263
EPYLHQL+P +++ L+ L A + LR +++++ + +Y Y +L R+ KT
Sbjct: 390 EPYLHQLLPPILSILLHSALPPTHAAH---LRTTASQILSHLLTQYSTTYPSLPPRIMKT 446
Query: 264 LLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG 302
LL AL+ ++ + GA++GL +G VR L+ G
Sbjct: 447 LLLALISSGKSRSTREGAIRGLIGIGKEAVRKGLVEGGG 485
>gi|336365599|gb|EGN93949.1| hypothetical protein SERLA73DRAFT_115423 [Serpula lacrymans var.
lacrymans S7.3]
Length = 461
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 175/345 (50%), Gaps = 54/345 (15%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDL------FYLDDKDV 54
MRH RRTT+TT D+D+AL++ N+EP+YG S P FRRA+ + L ++++D+++
Sbjct: 61 MRHGRRTTMTTSDIDQALRVLNIEPLYGHNSFNPPAFRRALPFPQLPTVGPVYFVEDEEI 120
Query: 55 EFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV-------QAIAA--------- 98
+F V+ P + HWLA+EGVQP+IPEN P Q +
Sbjct: 121 DFDRVLREEKITVPKGVNWTAHWLAVEGVQPLIPENPPAIPRDTDQQEVTKSPPISNTGF 180
Query: 99 ----PSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSL 154
PS+ + N+++ + + VK +LSRELQLY+ ++T + SD AL SL
Sbjct: 181 PPTPPSDRSTNKKQQQQQQQQQQLVKQVLSRELQLYYTRLTTSLLPPSDFAKRTAALASL 240
Query: 155 ATDSGLHPLVPYFTYFVADEVSRGL-------NNYSLLFALMRVVWNLLQNPHIQIEPY- 206
D+GL L+PY +V + V L N+ +L ++ VV +L+N + IEPY
Sbjct: 241 RHDAGLQALLPYLIRWVGESVVNALKDSSDSDNDGKVLEVMLHVVSAILENSALFIEPYV 300
Query: 207 -----------------LHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRY 249
LHQ++P +++ L+ L A LR ++ ++ + ++
Sbjct: 301 SLQFFTIQYLLNHLVLQLHQILPPILSTLLHSFLPPSYAT---LLRTMASQTLSRLLTQH 357
Query: 250 GHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVR 294
Y +L R+ KTLL AL+ P ++ GA++GL +G VR
Sbjct: 358 STTYPSLSPRIMKTLLLALISPDKSKNTREGAIRGLIGIGKEAVR 402
>gi|297739129|emb|CBI28780.3| unnamed protein product [Vitis vinifera]
Length = 149
Score = 158 bits (400), Expect = 5e-36, Method: Composition-based stats.
Identities = 72/88 (81%), Positives = 83/88 (94%)
Query: 247 KRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 306
+R+GHVYN QT+LTKTLL+A+LDPKRA+TQHYGA+QGLAALGPN+VRLL++PNL PYL
Sbjct: 52 RRFGHVYNNQQTQLTKTLLHAVLDPKRAMTQHYGAIQGLAALGPNMVRLLVVPNLEPYLR 111
Query: 307 LLEPEMLLEKQKNEVKRHEAWRVYGALL 334
LLE EMLLEKQKNE+KRHEAWRVYGALL
Sbjct: 112 LLESEMLLEKQKNEIKRHEAWRVYGALL 139
>gi|426196098|gb|EKV46027.1| hypothetical protein AGABI2DRAFT_152253 [Agaricus bisporus var.
bisporus H97]
Length = 507
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 175/346 (50%), Gaps = 55/346 (15%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDL-------------- 46
MRH RRTTLT+ D+D AL+ N+EP+YG +R+A+ + +
Sbjct: 60 MRHGRRTTLTSSDIDLALRTLNIEPLYGHLPFSQPSYRKALPFPQMNQPGSNQPSAAGPV 119
Query: 47 FYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV----QAIAAPSNG 102
++++D++++F+ V+ P S HWLA+EGVQP+IPEN P + AA
Sbjct: 120 YFVEDEEIDFERVMREEKVMLPKGVSWTAHWLAVEGVQPLIPENPPAVPREEPTAAGETK 179
Query: 103 TNN------------------EQKDG-LP----VEIKLPVKHILSRELQLYFDKITELAV 139
N QK G LP + VK +LSRELQLY+ ++T +
Sbjct: 180 VNGALTSVPAATGAAGLLPGGGQKHGALPNASSAQSANLVKQVLSRELQLYYTRLTSSLL 239
Query: 140 SRSDSVLFKQ----ALVSLATDSGLHPLVPYFTYFVADEVSRGL-------NNYSLLFAL 188
S+++ + AL SL D+GL L+PY +V + V+ L + +L L
Sbjct: 240 PPSNTLDYTTKKAAALASLRHDAGLQALLPYLVRWVGEGVAGVLKTGKQDDGDGKVLEVL 299
Query: 189 MRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKR 248
M VV LL+N + +EPYLHQL+P +++ L+ L L+ +LR ++ ++ + +
Sbjct: 300 MDVVSALLENKTLFVEPYLHQLLPPILSTLLHSSLPAALST---QLRVCASQTLSHVLTQ 356
Query: 249 YGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVR 294
+ Y +L R+ KTLL AL+ P ++ GAV+GL +G VR
Sbjct: 357 HSTTYPSLSPRIMKTLLLALISPGKSRGTREGAVRGLMGVGKEAVR 402
>gi|444313621|ref|XP_004177468.1| hypothetical protein TBLA_0A01500 [Tetrapisispora blattae CBS 6284]
gi|387510507|emb|CCH57949.1| hypothetical protein TBLA_0A01500 [Tetrapisispora blattae CBS 6284]
Length = 589
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 194/446 (43%), Gaps = 150/446 (33%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRF---RRAIGY----------RDLFY 48
RH++R L+T+D+ ++L + NVEP+YG+ + L + +IG+ R +++
Sbjct: 57 RHAKRNVLSTNDIAKSLTVLNVEPLYGYHNHQVLNGHSNQSSIGFTRCQVPGAPDRPVYF 116
Query: 49 LD-DKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGV----------------QPVIPENA 91
+ D++ + + +++ PLP P + HWLA+EGV QP A
Sbjct: 117 ISGDEEADLEKLLQQPLPPIPRLPTFSAHWLAVEGVQPAIPQNPRLQEIRMAQPPAIRGA 176
Query: 92 PVQAI------AAPSNGTN---------------------NEQKDGLP------------ 112
V A+ A NGT N +GL
Sbjct: 177 IVTALNDNSIHAEGDNGTGSGTGSTNNVLDGPDSSTIAGANNSINGLSNPNIQSSRPRVT 236
Query: 113 ----------VEIKLPVKHILSRELQLYFDKITELAVSRSDSV----LFKQALVSLATDS 158
++K V+H+LSRELQLYFDK+ E S S S L AL SL TDS
Sbjct: 237 SRVKPGSHSNTQLKPLVRHVLSRELQLYFDKVVEALTSSSSSPDSSHLRSAALTSLRTDS 296
Query: 159 GLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCL 218
GLH LVPYF F+A++++ LN+ LL +++ ++++LL N I ++PY+H LMPS++T L
Sbjct: 297 GLHQLVPYFIQFIAEQITHHLNDLDLLTSILEMIYSLLSNESIFLDPYIHSLMPSILTLL 356
Query: 219 VAKRLG------------------------------------------NRLADNHWELRD 236
+AK+LG N+ DN E++D
Sbjct: 357 LAKKLGTPPNNLPKLTSNNNNNNNINNNINNNNNTDKSDVSSSSTKNENKDKDNDIEMKD 416
Query: 237 -------------------------FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP 271
F A ++ + K++ +Y +L+ R+ +TLL LD
Sbjct: 417 TDTTTTNPQEDDLKGYLEKTNALRDFAASMLDYVLKKFPQIYKSLKPRVARTLLKTFLDL 476
Query: 272 KRALTQHYGAVQGLAALGPNVVRLLL 297
+YG ++G+A LG +R L
Sbjct: 477 NHVFGTYYGCLRGIAVLGNETIRFFL 502
>gi|300701912|ref|XP_002995057.1| hypothetical protein NCER_102196 [Nosema ceranae BRL01]
gi|239603739|gb|EEQ81386.1| hypothetical protein NCER_102196 [Nosema ceranae BRL01]
Length = 353
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 161/300 (53%), Gaps = 18/300 (6%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M S+RT L+ +D++ L RNV+P++G+ L F+ +FY+ D++++ ++ +
Sbjct: 47 MLASKRTKLSIEDINYGLISRNVDPLFGYDPQDNLVFKGLPS--GIFYVPDEELDIEEYL 104
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPEN-APVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
E PLP+ PL+TSI HWLAIEGVQP +N +Q + Q++ E+K
Sbjct: 105 ERPLPKIPLNTSIQSHWLAIEGVQPQTAQNPILIQKTEQKKDTLITYQEE---TELKSQN 161
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
KHIL++EL +YF+KI + + D A+ L +SG+ LVPYF + ++ + L
Sbjct: 162 KHILTKELNMYFEKIIQTMETDEDI-----AIECLKNESGIQQLVPYFIHHFNQQIIKNL 216
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
L ++ + +LL N +I I+PYLHQ++PS++TC+V K + + +R ++
Sbjct: 217 KVTEKLKTVIMMYNSLLNNQYIFIDPYLHQILPSLLTCVVGKSVDDS-------VRYLSS 269
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
++ + + Y TL R+ TL LD + GA++ L L V+ ++ P
Sbjct: 270 DVIKFVYDNFASKYKTLGPRIISTLSKTWLDKDKNENVQLGALRCLGILSQEVINNVIKP 329
>gi|291244770|ref|XP_002742270.1| PREDICTED: TBP-associated factor 6-like [Saccoglossus kowalevskii]
Length = 442
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 135/221 (61%), Gaps = 11/221 (4%)
Query: 91 APVQAIAAPSNGT-NNEQKDGLP------VEIKLPVKHILSRELQLYFDKITELAVSRSD 143
AP + P +G N+ K G+ +++K V H LS E QL++ +ITE V +
Sbjct: 2 APPSLLGVPGSGLLKNKSKTGIASDVVAQLKLKPLVMHELSVEQQLFYKEITEACVGACE 61
Query: 144 SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHI 201
S +AL SL++D GL+ ++P F+ F+A+ V + NN +LL LMR+V L+ N I
Sbjct: 62 S-RRSEALQSLSSDPGLYQMMPRFSTFIAEGVKVNVVQNNLALLIYLMRMVKALMDNTTI 120
Query: 202 QIEPYLHQLMPSVVTCLVAKRLGNRL-ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRL 260
+E YLH+L+P+V TC+V+K+L R DNHW LRDF A+L+A++CK++ N +Q R+
Sbjct: 121 FLEKYLHELIPAVSTCIVSKQLCLRPDVDNHWALRDFAARLMASLCKKFSTTINNIQARM 180
Query: 261 TKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
TK AL + K L HYG++ GL+ L P V++ +LP +
Sbjct: 181 TKMFDKALQNDKAPLAIHYGSIAGLSELAPEVIKSQVLPRI 221
>gi|390363871|ref|XP_783285.2| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like
[Strongylocentrotus purpuratus]
Length = 647
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 183/344 (53%), Gaps = 20/344 (5%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV- 59
M+HS+R +T+DDV++AL+ +VEP++G+ S P FR+ I +L++++D+++ ++
Sbjct: 68 MKHSKRKRMTSDDVNKALRWSDVEPIHGYGSNEPAVFRQ-IKDTNLYFVEDRELSLSEIA 126
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGV-QPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLP 118
++ +P + +TS+ +WLA+EGV + V+ + P QA A Q G+ +++
Sbjct: 127 MDTKIPNSAGNTSLKANWLALEGVHKTVVQSSDPGQAAAEGIQKILGVQGQGMTHSMEM- 185
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
LS + Y+ I + A+ +D K L+ L T+S + L+PY FV S G
Sbjct: 186 ----LSSDQVTYYQHIIK-AILGTDEEAKKVVLIDLQTNSKIAGLLPYLVNFV----SAG 236
Query: 179 LNNYSL----LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK-RLGNRLADNHWE 233
+ SL L L+ ++ LL+N I + PY+ QL+ +V+ C++ + ++HW
Sbjct: 237 VKVVSLELYQLTGLLYIIDALLRNQFIYLGPYMIQLVSTVMYCILEPLAVSINPLNDHWG 296
Query: 234 LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVV 293
LRD+ A+L+ I + + ++ + DP R L +YGAV GL ALGP V
Sbjct: 297 LRDYAARLLLPILRCSKESKSKFYHQMLTAFQEVMKDPARPLCTYYGAVMGLIALGPQAV 356
Query: 294 RLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAA 337
+L P L Y L + +LE + + +V+GALL AA
Sbjct: 357 EDVLCPRLSSYWPTL--QQVLEDTSITRVKEDGHKVHGALLTAA 398
>gi|170092004|ref|XP_001877224.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648717|gb|EDR12960.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 475
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 194/390 (49%), Gaps = 57/390 (14%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRD------LFYLDDKDV 54
MRH RRTT++T D+D+A ++ N+EP+YG P FRRA+ + +++++D+++
Sbjct: 58 MRHGRRTTMSTSDIDQAFRVLNIEPLYGHTPHNPHTFRRALPFPQVPAAGPVYFVEDEEI 117
Query: 55 EFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-VQAIAAPSNGTNNE---QKDG 110
+F V++ P S HWLA+EGVQP+IPEN P + ++GT E + +G
Sbjct: 118 DFDRVLKEEKIALPKGVSWTAHWLAVEGVQPLIPENPPAIPRETVDADGTKGESLTKLNG 177
Query: 111 ---LPVEIKLPVK--------------HILSRELQLYFDKITELAVSRS-DSVLFKQALV 152
LP P + +LSRELQLY+ ++T + S D AL
Sbjct: 178 TGLLPTPTTAPQQGAKAAPGQQQQLVKQVLSRELQLYYARLTSSLLPPSLDLTKRTAALA 237
Query: 153 SLATDSGLHPLVPYFTYFVADEVSRGLNNYS-------LLFALMRVVWNLLQNPHIQIEP 205
SL D+GL L+PY +V + V L S +L L+ V L++N + IEP
Sbjct: 238 SLRHDAGLQALLPYLVRWVGEGVVGTLKEGSQSETDGRVLEVLLDVTSALIENNTLFIEP 297
Query: 206 YLHQLMPSVVTCLVAKRLGNRLADNHWE-LRDFTAKLVAAICKRYGHVYNTLQTRLTKTL 264
YLHQ+ P ++ L L + L +H LR ++ ++ + ++ Y +L R+ KTL
Sbjct: 298 YLHQIFPPTLSIL----LHSSLPLSHATLLRTSASQTLSRLLTQHSTTYPSLSPRIMKTL 353
Query: 265 LNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRH 324
L AL+ P ++ GA++GL +G VR L+ G + + E Q N +
Sbjct: 354 LLALISPGKSKGTREGAIRGLLGVGKEAVRKGLVEGGGAKV------VGAECQGNNSES- 406
Query: 325 EAWRVYGALLQAAGQCIYDRLKIFPPLSSL 354
GAL+ + + D L++ PLS +
Sbjct: 407 ------GALVGS----VMDALRVLQPLSDM 426
>gi|260803104|ref|XP_002596431.1| hypothetical protein BRAFLDRAFT_194325 [Branchiostoma floridae]
gi|229281687|gb|EEN52443.1| hypothetical protein BRAFLDRAFT_194325 [Branchiostoma floridae]
Length = 444
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 162/334 (48%), Gaps = 40/334 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKD-V 59
MRH++R LT +D + AL+ NVEP+YG S P+ FR +L++ +D+++ +
Sbjct: 51 MRHAKRKRLTAEDFNRALRWSNVEPMYGHNSPDPMVFRPTKD-AELYFYEDREINLTEFA 109
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
+E LPR P +T++ + G + L
Sbjct: 110 METILPRNPGETTV---------------------------------KGKGFHFKELLSY 136
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
LS EL Y+D++T A+ + L K AL L T+S + L+PYF Y V EV
Sbjct: 137 SPALSEELVQYYDQVTR-AILGGNEQLIKTALADLRTNSRISALLPYFVYLVG-EVKSIS 194
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++ L+QNPH+ + PYL QL+ SV+ C++ N L D HW LRD+
Sbjct: 195 HDLEALTRLLQTAQALIQNPHLYLGPYLKQLVASVMYCILEPLAASINPLND-HWALRDY 253
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A+L+A IC+ LQ +L L L+DP R L HYGAV GL ALG V +L
Sbjct: 254 AARLLAQICRSGCMSVEGLQKQLLLALQKVLVDPARPLCSHYGAVVGLTALGSKAVEDVL 313
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYG 331
P LG Y L+ M N + +A RV G
Sbjct: 314 YPQLGTYWPFLQSWMEDRTISNAQAKADAHRVQG 347
>gi|147812199|emb|CAN72685.1| hypothetical protein VITISV_036815 [Vitis vinifera]
Length = 213
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/88 (80%), Positives = 81/88 (92%)
Query: 247 KRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 306
+R+GHVYN QT+LTK LL+A LDPKRA+TQHYGA+QGLAA GPN+VRLL++PNL PYL
Sbjct: 19 RRFGHVYNNQQTQLTKXLLHAFLDPKRAMTQHYGAIQGLAAPGPNMVRLLVVPNLEPYLR 78
Query: 307 LLEPEMLLEKQKNEVKRHEAWRVYGALL 334
LLEPEMLLEKQKNE+KRHEAWRVYGALL
Sbjct: 79 LLEPEMLLEKQKNEIKRHEAWRVYGALL 106
>gi|409042582|gb|EKM52066.1| hypothetical protein PHACADRAFT_262519 [Phanerochaete carnosa
HHB-10118-sp]
Length = 418
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 172/352 (48%), Gaps = 46/352 (13%)
Query: 9 LTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY------RDLFYLDDKDVEFKDVIEA 62
+TT D+D+AL++ N+EP+YG P FRRA Y +++++D++++F +I+
Sbjct: 1 MTTSDIDQALRVLNIEPLYGHYPHNPPTFRRAGPYPPNQAAGAVYFVEDEEIDFDRIIKE 60
Query: 63 PLPRAPLDTSIVCHWLAIEGVQPVIPENAPV-----QAIAAPSNGTNNEQKDG------- 110
P T HWLA+EGVQP+IPEN P + A NG G
Sbjct: 61 EKISVPKGTRWTAHWLAVEGVQPLIPENPPAIPKEHEPEAHGVNGVVKAASAGGSIFPPT 120
Query: 111 -------LPVE-IKLPVKHIL----------SRELQLYFDKITELAVSRSDSVLFKQALV 152
P++ +K P++ SRELQLY+ ++T V D AL
Sbjct: 121 PPSSDRPSPIQAVKRPLQQTTQQQQLVKQVLSRELQLYYTRLTTALVPPVDQTKRTAALA 180
Query: 153 SLATDSGLHPLVPYFTYFVADEVSRGL-------NNYSLLFALMRVVWNLLQNPHIQIEP 205
SL D+GL L+PY +VA+ V L N+ L L+ V+ LL NP + +EP
Sbjct: 181 SLRHDAGLQALLPYLVRWVAEGVVASLRTGAQSDNDGKTLAVLLEVIGALLDNPTLFVEP 240
Query: 206 YLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLL 265
YLHQL+P +++ L+ L A + LR ++ ++ + ++ Y +L R+ KTLL
Sbjct: 241 YLHQLLPPILSTLLHSSLPPEHATH---LRTLASQTLSHLLTQHSTTYPSLSPRIVKTLL 297
Query: 266 NALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQ 317
AL+ +++ GA+ GL +G +R ++ G + E + +E Q
Sbjct: 298 LALIGKDKSMGTREGAIWGLMGIGKEAIRKGVVEGGGAKVVGAECALAMEDQ 349
>gi|392591785|gb|EIW81112.1| TAF-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 480
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 172/342 (50%), Gaps = 47/342 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGG-PLRFRRAI--------GYRDLFYLDD 51
MRH+RRTTLTT D+D AL+ N+EP+YGF P FRRA G+ +++++D
Sbjct: 60 MRHARRTTLTTADMDNALRTLNIEPLYGFGGATVPPPFRRAAPFPHMQGQGHGPIYFIED 119
Query: 52 KDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDG- 110
+V+F V+ P S HWLA+EGVQP+IPEN P A P + Q+DG
Sbjct: 120 DEVDFDRVLREEKITVPRGVSWAAHWLAVEGVQPLIPENPP----AVPRDSDQPPQQDGA 175
Query: 111 --------------LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT 156
+ + VK +LSRELQLY+ ++T + +D+ AL SL +
Sbjct: 176 ANTAALAAQKKPQQQQQQQQQLVKQVLSRELQLYYARLTASLLPPTDNAKRTAALASLRS 235
Query: 157 DSGLHPLVPYFTYFVADEVSRGLNNYS-------LLFALMRVVWNLLQNPHIQIEPYLHQ 209
D+GL L+PY ++ + V L S L L+ V +L+N + +EPYLHQ
Sbjct: 236 DAGLQALLPYLVKWIGEGVVNVLREGSGSESDGRTLEVLLDAVSAILENNTLFVEPYLHQ 295
Query: 210 LMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 269
++P +++ L+ L A + LR + +A + + Y +L R+TKTLL ALL
Sbjct: 296 ILPPLLSTLLHTSLPPTHASH---LRATASSTLARVLTTHSTTYPSLTPRITKTLLLALL 352
Query: 270 DPKRALTQHY---------GAVQGLAALGPNVVRLLLLPNLG 302
+ + GA++GL A+G VR L+ G
Sbjct: 353 GTSTNFSNGHQGASFGTRIGAIRGLGAIGKEAVRKGLVEGGG 394
>gi|449549185|gb|EMD40151.1| hypothetical protein CERSUDRAFT_112363 [Ceriporiopsis subvermispora
B]
Length = 476
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 172/342 (50%), Gaps = 48/342 (14%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDL------FYLDDKDV 54
MRH+RRTT+TT D+D AL++ N+EP+YG P FRRA+ + +L ++++D+++
Sbjct: 62 MRHARRTTMTTADIDNALRVLNIEPLYGHTPHNPPTFRRALPFPNLQSAGSVYFVEDEEI 121
Query: 55 EFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE 114
+F VI P S HWLA+EGVQP+IPEN P A P + + + K G P
Sbjct: 122 DFDRVIREEKLTLPKGVSWTAHWLAVEGVQPLIPENPP----AIPRD-PDQDLKPGSPAR 176
Query: 115 ------------------------IKLPVKHILSRELQLYFDKITELAVSRS---DSVLF 147
+ VK +LSRELQLY+ ++T + S D
Sbjct: 177 PGTIFPPTPPSDGPHQAAKKAAQQQQQLVKQVLSRELQLYYTRLTSALLPTSGTADPAKR 236
Query: 148 KQALVSLATDSGLHPLVPYFTYFVADEVSRGLN-------NYSLLFALMRVVWNLLQNPH 200
AL SL D+GL L+PY +V + V L + +L + V+ LL NP
Sbjct: 237 TAALASLRHDAGLQALLPYIVRWVGEGVVAALRGGVQTEADARVLEVFLDVIGALLDNPT 296
Query: 201 IQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRL 260
+ +EPYLHQL+P +++ L+ L + + LR A+ +A + Y Y +L R+
Sbjct: 297 LFVEPYLHQLLPPLLSVLLHSALPPAQSTH---LRTAAAQTLAHLLTTYATTYPSLPPRV 353
Query: 261 TKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG 302
KTLL ALL R+ GAV+GL +G VR LL G
Sbjct: 354 MKTLLLALLAQGRSAGTREGAVRGLVGVGREAVRKGLLEGGG 395
>gi|269859744|ref|XP_002649596.1| transcription initiation factor TFIID subunit [Enterocytozoon
bieneusi H348]
gi|220066959|gb|EED44428.1| transcription initiation factor TFIID subunit [Enterocytozoon
bieneusi H348]
Length = 354
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 163/302 (53%), Gaps = 18/302 (5%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M S R L T DV+ AL RNVEP++G+ S L F+ + +++ D++++ ++ +
Sbjct: 47 MHASHRKKLNTSDVNNALISRNVEPLFGYESQEILIFKGLPS--NSYFVPDEEIDLEEYL 104
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNG-TNNEQKDGLPVEIKLPV 119
+ PLP+ PL I HWLAIEGVQP I +N + P N +N Q++ + IK +
Sbjct: 105 DKPLPKIPLRPYIQSHWLAIEGVQPPIQQNPIILERQQPKNDPISNFQEEMI---IKKQI 161
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
KH L++EL +YF+KI L V +D + ++ L ++G+ LVPYF + ++ +
Sbjct: 162 KHRLTKELNMYFEKI--LQVMETDPSI---SMECLENETGIQQLVPYFIHQFNTDIRNNI 216
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
N + + ++LL+N + I+PYLH+++PS+++C+V K + + ++RD
Sbjct: 217 GNTLKAKTICLMYFSLLKNKFLFIDPYLHEILPSLLSCVVGKSVSH-------DVRDVAI 269
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
++ + + Y TL R+ TL +A L+ ++ A++ L+ L +V L
Sbjct: 270 DVIKYVYDNFSCNYLTLAPRIVNTLKSAWLNEEKIPESRLAAIKCLSVLSSKIVENFLTS 329
Query: 300 NL 301
L
Sbjct: 330 EL 331
>gi|348546063|ref|XP_003460498.1| PREDICTED: transcription initiation factor TFIID subunit 6-like,
partial [Oreochromis niloticus]
Length = 246
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 105/157 (66%), Gaps = 3/157 (1%)
Query: 149 QALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHIQIEPY 206
+AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP + +E Y
Sbjct: 1 EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY 60
Query: 207 LHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLL 265
LH+L+P+VVTC+V+K+L R DNHW LRDF A+L+A CK + N +Q+R+TKT
Sbjct: 61 LHELIPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFT 120
Query: 266 NALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG 302
+ LD K T YG + GLA LG +V++ L++P L
Sbjct: 121 KSWLDDKTQWTTRYGCIAGLAELGSDVIKTLIIPRLA 157
>gi|256082306|ref|XP_002577399.1| transcription initiation factor tfiid [Schistosoma mansoni]
gi|350645501|emb|CCD59853.1| transcription initiation factor tfiid, putative [Schistosoma
mansoni]
Length = 536
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 152/319 (47%), Gaps = 57/319 (17%)
Query: 30 ASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPE 89
AS GP G + F DK+++ K ++ D S+V HWL++ G QP P+
Sbjct: 153 ASSGP-------GGKVFFIRPDKEIDVKALLLREPAGVIYDVSLVAHWLSVNGKQPTSPQ 205
Query: 90 NAP-----VQAIAAPSNGTNNEQK---------DGLPVEIKLPVK--------------- 120
N P A+ S G+NN+Q D + ++ K
Sbjct: 206 NPPPDFLAKMALLNNSFGSNNKQNKRPISHQKNDDINSSVEKHSKIGIHNSNRDKLDLLS 265
Query: 121 ----------------HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLV 164
H +S+E+ +YF ++TE V ++ +AL + D GL P++
Sbjct: 266 GSHPRKVLAVSVERRPHEISQEVMIYFRELTEACVG-ANETRRHEALDNATLDPGLQPIL 324
Query: 165 PYFTYFVADEVSRGLNNYSL--LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKR 222
P+ F+ + V + N++L L LMR+V L+ NPHI +EPYLH L+P+V+TC++ ++
Sbjct: 325 PHLMTFITEGVRINVTNHNLAILIYLMRLVKALIDNPHISLEPYLHLLVPTVITCVLNRQ 384
Query: 223 LGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPK-RALTQHYG 280
L + + DNHW LRDF AK + +C R+ N L R+T+ L AL ++ YG
Sbjct: 385 LCAKPITDNHWALRDFAAKQLVTLCNRHNTSSNELYGRVTRELSRALCSSAIHSMNTLYG 444
Query: 281 AVQGLAALGPNVVRLLLLP 299
+ LA G +R+ + P
Sbjct: 445 IIVALAEFGAQCLRMTVFP 463
>gi|390602989|gb|EIN12381.1| hypothetical protein PUNSTDRAFT_97062 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 440
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 175/339 (51%), Gaps = 54/339 (15%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-------------------- 40
MRH RRTTLTT D+D AL++ N+EP+YG + PL FRRA
Sbjct: 21 MRHGRRTTLTTADIDNALRVLNIEPLYGHSPHAPLAFRRAPPVYLPSQPGAANHHHAPSQ 80
Query: 41 IGYRDLFYLDDKDVEFKDV--------IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 92
+++++D++++F ++ I+ P P S HWLA+EGVQP IPEN P
Sbjct: 81 AQSTSVYFVEDEEIDFDNLGRGLREEKIQLPKP-----VSWTAHWLAVEGVQPAIPENPP 135
Query: 93 VQAI---AAPSNGTNNEQKDGLPVEIKLP---VKHILSRELQLYFDKITELAV----SRS 142
I AA N T+ +Q GLP + VK +LSRELQLY+ ++T + +
Sbjct: 136 PVPIPRDAATENATDTKQP-GLPSAVGPQPQLVKQVLSRELQLYYTRLTSALLPPLQGEA 194
Query: 143 DSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS-------LLFALMRVVWNL 195
++ AL SL D+GL L+PY +V + V L + + +L L+ V+ L
Sbjct: 195 EAAKRAAALASLRHDAGLQALLPYLVRWVGEGVVAALKDGAQNVLDGRVLEVLLDVIGAL 254
Query: 196 LQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNT 255
L N + +EPYLHQL+P +++ L+ L LA + LR A ++ + ++ Y +
Sbjct: 255 LDNQTLFVEPYLHQLLPPILSILLHSSLPPALAKH---LRTSAASTLSHLLTQHSTTYPS 311
Query: 256 LQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVR 294
L R+ KTLL AL+ P + GA++GL +G VR
Sbjct: 312 LSPRIMKTLLLALVSPDKGAGTREGAIRGLVGVGKEAVR 350
>gi|389740215|gb|EIM81406.1| TAF-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 502
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 170/347 (48%), Gaps = 45/347 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDL------FYLDDKDV 54
MRH+RRT+LTT+D+D+AL++ N+EP+YG P FRRA+ + L ++L+D+++
Sbjct: 62 MRHARRTSLTTNDIDQALRVLNIEPLYGHTPHNPPSFRRALPFPTLPAAGSVYFLEDEEI 121
Query: 55 EFKDVI-EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGL-- 111
+F V+ E L HWLA+EGVQP+IPEN P P GT +GL
Sbjct: 122 DFDRVLKEERLSTGNNGVRWTAHWLAVEGVQPLIPENPPAIPKDEPGAGTQKNGVNGLVA 181
Query: 112 ---------PVEIKLPV------------KHILSRELQLYFDK----ITELAVSRSDSVL 146
P +L K +LSRELQLY + + + + +D
Sbjct: 182 GMGQSTPTSPGARRLAASQHSQQQQQQLVKQVLSRELQLYHARLTSSLLSPSSTTADQTK 241
Query: 147 FKQALVSLATDSGLHPLVPYFTYFVADEV----------SRGLNNYSLLFALMRVVWNLL 196
AL SL D+GL PL+PY +VA+ V G +L ++V+ LL
Sbjct: 242 RTAALASLRHDAGLQPLLPYLVRWVAEGVIAILKEGPDSGEGDETGRVLEVYLQVIAALL 301
Query: 197 QNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWE-LRDFTAKLVAAICKRYGHVYNT 255
N + +EPYLHQL+P +++ L+ L N +R ++ ++ + ++ Y
Sbjct: 302 DNQTLFVEPYLHQLLPPILSSLLYSSLPLPTPLNKPNPIRTHASQTLSHLLTQHSLSYPD 361
Query: 256 LQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLG 302
L R+ KTLL L+ +A GAV GL A+G VR LL G
Sbjct: 362 LSPRIMKTLLVGLVGVNKAKGTREGAVMGLIAVGKEAVRQGLLGKNG 408
>gi|270006902|gb|EFA03350.1| hypothetical protein TcasGA2_TC013335 [Tribolium castaneum]
Length = 316
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 139/241 (57%), Gaps = 16/241 (6%)
Query: 112 PVEIKL-PVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
P+ +KL P H LS E Q++F K+TE A ++ V + L +LA D + L PY + F
Sbjct: 34 PILLKLHPDPHPLSAEEQVFFVKLTEGAFGFNEHVR-NETLQTLARDFHVKFLAPYLSQF 92
Query: 171 VADEVSRGLN--NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA 228
+ D + + + SLL +RVV +L+ NPH+ I+ +LH L+P+V++C+V++++
Sbjct: 93 INDAICVNIAFPDLSLLIYSVRVVKSLMANPHVNIKEHLHLLLPAVISCVVSRKISKYSY 152
Query: 229 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
DNHW LRDF+A++VA IC + + N ++TR+ K L A+ DP++ LT YG ++GL+
Sbjct: 153 DNHWTLRDFSAQVVATICCTHSNSINQMKTRVIKVYLRAVQDPRKPLTTVYGGLKGLSCF 212
Query: 289 GPNVVRLLLLPNLGPYLS-----LLEPEMLLEKQKNEVKRHEAWRVYGALLQAAG----Q 339
G VR L+P L P LS +LE + L +E K + R+ +L G Q
Sbjct: 213 GEETVRTCLVP-LIPVLSRRVCMVLEKTVYLGDPSHETK--QIKRITDLVLAVVGPVLLQ 269
Query: 340 C 340
C
Sbjct: 270 C 270
>gi|327290084|ref|XP_003229754.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like [Anolis
carolinensis]
Length = 617
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 174/354 (49%), Gaps = 35/354 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ NVE V G+ S PL FR + +L++ +D+++ ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSNVEAVCGYGSQDPLPFR-TLKEGELYFQEDREINLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A++A
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLEPQGSVPSAVSA--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA--DEVSR 177
L+ +L Y+ +T AV D L K AL L T+ + L+PYF Y V+ VS
Sbjct: 153 ---LTDDLLKYYQHVTR-AVLGDDPQLMKVALQDLQTNPKIAALLPYFVYVVSGVKSVSH 208
Query: 178 GLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELR 235
L S L + R +L+QNP++ + Y+ L+ SV+ C++ N L D HW LR
Sbjct: 209 DLEQLSRLLHVAR---SLIQNPYLYLGSYVKSLIASVMYCVLEPLAASINPLND-HWTLR 264
Query: 236 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 295
D+ A L+ I + +G + L ++ +L L DP R L HYGAV GL ALG V
Sbjct: 265 DYAAMLLGHIFRTHGDLVGGLFPQILLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVER 324
Query: 296 LLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFP 349
+L P+L Y S L+ + N + + +VYGA+L A + + + + P
Sbjct: 325 VLYPHLSTYWSNLQAVLDDYSVSNAQVKADGHKVYGAILVAVERLLKMKAQSLP 378
>gi|189237599|ref|XP_001808215.1| PREDICTED: similar to TFIID subunit [Tribolium castaneum]
Length = 372
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 125/206 (60%), Gaps = 5/206 (2%)
Query: 113 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 172
+ ++ H LS E Q++F K+TE A ++ V + L +LA D + L PY + F+
Sbjct: 12 IHLRRRATHPLSAEEQVFFVKLTEGAFGFNEHVR-NETLQTLARDFHVKFLAPYLSQFIN 70
Query: 173 DEVSRGLN--NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN 230
D + + + SLL +RVV +L+ NPH+ I+ +LH L+P+V++C+V++++ DN
Sbjct: 71 DAICVNIAFPDLSLLIYSVRVVKSLMANPHVNIKEHLHLLLPAVISCVVSRKISKYSYDN 130
Query: 231 HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP 290
HW LRDF+A++VA IC + + N ++TR+ K L A+ DP++ LT YG ++GL+ G
Sbjct: 131 HWTLRDFSAQVVATICCTHSNSINQMKTRVIKVYLRAVQDPRKPLTTVYGGLKGLSCFGE 190
Query: 291 NVVRLLLLPNLGPYLSLLEPEMLLEK 316
VR L+P L P LS M+LEK
Sbjct: 191 ETVRTCLVP-LIPVLS-RRVCMVLEK 214
>gi|126333621|ref|XP_001362631.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like isoform
1 [Monodelphis domestica]
Length = 615
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 171/339 (50%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ NVE V G+ S L R A DL++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSNVEAVCGYGSQETLPLRPAR-EGDLYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G V P+ + A+++
Sbjct: 114 LATNIPKGCPETAVRVHVSYLDGKGNVEPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYQQVTR-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +LL+NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLLRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + N L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTHGDLVNGLSQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWANLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|348541933|ref|XP_003458441.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like
[Oreochromis niloticus]
Length = 639
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 173/341 (50%), Gaps = 35/341 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH++R LT +D + AL+ NVE + G+ + L FR ++ +LF+++D+DV ++
Sbjct: 55 MRHAKRRKLTVEDFNRALRWSNVEAICGYGAQDALPFR-SVKEGELFFVEDRDVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T + + ++G N E + +P ++
Sbjct: 114 LATNIPKGCAETMVRVNVSYLDG-------------------KGNLEPQGTVPTAVQ--- 151
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSR 177
LS +L Y+ +IT A+ D L K AL+ L ++S + L+PYF Y ++ VS
Sbjct: 152 --SLSDDLLKYYQQITR-AILGEDPHLMKVALLDLQSNSKIAALLPYFVYVISGVKSVSH 208
Query: 178 GLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELR 235
L L LM +V +L+QNP++ + Y+ L+ SV+ C++ N L D HW LR
Sbjct: 209 DLEQ---LNRLMHMVKSLVQNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTLR 264
Query: 236 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 295
D+ A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V
Sbjct: 265 DYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVER 324
Query: 296 LLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
+L P+L Y + L+ + N + + +VYGA+L A
Sbjct: 325 VLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|291190468|ref|NP_001167272.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Salmo salar]
gi|223648978|gb|ACN11247.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Salmo salar]
Length = 637
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 172/339 (50%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH++R LT +D + AL+ NVE + G+ + L FR I +LF++DD+D+ ++
Sbjct: 52 MRHAKRRKLTVEDFNRALRWSNVEAIAGYGAQDALPFR-PIKEGELFFVDDRDINLVELA 110
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T + + ++G N E + +P ++
Sbjct: 111 LATNIPKGCAETMVRVNVSYLDG-------------------KGNLEPQGTVPSAVQ--- 148
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
LS +L Y+ +IT A+ D L K AL+ L ++S + L+PYF Y ++ V
Sbjct: 149 --TLSEDLLKYYQQITR-AILGEDPHLMKVALLDLQSNSKIAALLPYFVYVISG-VKSVS 204
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L+ +V +L+QNP++ + Y+ L+ SV+ C++ N L D HW LRD+
Sbjct: 205 HDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTLRDY 263
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 264 AALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVERVL 323
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 324 YPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYGAILVA 362
>gi|440898153|gb|ELR49708.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Bos grunniens mutus]
Length = 619
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 171/339 (50%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A DL++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPAR-EGDLYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETALRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYQQVTR-AVLGDDPQLMKIALHDLQTNSKIAALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLVRNPHLCLVPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I YG + N L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTYGDLVNGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|302689849|ref|XP_003034604.1| hypothetical protein SCHCODRAFT_52257 [Schizophyllum commune H4-8]
gi|300108299|gb|EFI99701.1| hypothetical protein SCHCODRAFT_52257, partial [Schizophyllum
commune H4-8]
Length = 455
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 177/338 (52%), Gaps = 39/338 (11%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRD-----LFYLDDKDVE 55
MRH RRTTLT D+++A K+ N+EP+YG + P FRRA+ Y + +++++D++++
Sbjct: 38 MRHGRRTTLTVSDMEQAFKVLNIEPLYGHSQHNPPVFRRALPYPNSNAGPVYFVEDEEID 97
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEI 115
F V+ P + HWLA+EGVQP IPEN PV N + +G+ V
Sbjct: 98 FDRVLREEKLALPKGVTYHAHWLAVEGVQPQIPENPPVIVKEGDVPAPLNAKTNGVVVTP 157
Query: 116 KLPVKH-----------------ILSRELQLYFDKITELAVSRSDSV---LFKQ--ALVS 153
VK +LSRELQLY+ ++T + S S L K+ A+ S
Sbjct: 158 AGGVKKLQQTPIQGQQQQQLVKQVLSRELQLYYTRLTTSLSTSSYSAPDELKKRAAAIGS 217
Query: 154 LATDSGLHPLVPYFTYFVADEV-------SRGLNNYSLLFALMRVVWNLLQNPHIQIEPY 206
L+ D+GL L+PY +V++ V + + L ++ V+ L++N + IEPY
Sbjct: 218 LSQDAGLQALLPYLIRWVSESVVAVLKEGGQSEQDGHTLETMLDVIGALMRNTTLFIEPY 277
Query: 207 LHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLN 266
LHQL+P +++ L+ + LR +A+ +A + +++ Y +L R+ KTLL
Sbjct: 278 LHQLLPPLLSLLLHS---TLPPSHAVVLRTKSAQTLAELLRKHSTTYPSLAPRIMKTLLL 334
Query: 267 ALLDPKRA--LTQHYGAVQGLAALGPNVVRLLLLPNLG 302
AL+ P+++ + GAV+GL +G VR L+ G
Sbjct: 335 ALISPEKSTHIGTREGAVRGLVGVGKEAVRKGLVEGGG 372
>gi|354504564|ref|XP_003514344.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Cricetulus
griseus]
Length = 673
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 171/341 (50%), Gaps = 35/341 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 62 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAR-EGELYFPEDREVNLVELA 120
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 121 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 159
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSR 177
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ VS
Sbjct: 160 ---LTDDLLKYYQQVTR-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSH 215
Query: 178 GLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELR 235
L L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LR
Sbjct: 216 DLEQ---LHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLR 271
Query: 236 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 295
D A L++ I +G + N L ++ +L L DP R L HYGAV GL ALG V
Sbjct: 272 DGAALLLSHIFWTHGDLVNGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVER 331
Query: 296 LLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
+L P+L Y + L+ + N + + +VYGA+L A
Sbjct: 332 VLYPHLPTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 372
>gi|156405270|ref|XP_001640655.1| predicted protein [Nematostella vectensis]
gi|156227790|gb|EDO48592.1| predicted protein [Nematostella vectensis]
Length = 375
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 166/347 (47%), Gaps = 37/347 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRR-AIGYRDLFYLDDKDVEFKDV 59
M+H +R +TT+D++ A++L NVEPVYG+ SG + FR + D+F++D+K++ +++
Sbjct: 58 MKHGKRRRMTTEDLNRAMQLTNVEPVYGYGSGEDMPFRSTSTKEGDVFFVDEKEIGIREL 117
Query: 60 -IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLP 118
+ +P P S+ + V + + AI+ GL
Sbjct: 118 ALSTAVPTDPGKVSVRGKYEMYFTVHATVLGCSSKAAISTA----------GLE------ 161
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
Y+++IT+ + SD V + A L ++ + + PYF F+A V
Sbjct: 162 -----------YYEQITKAVLGESD-VCRRMAFSDLQSNPKISCIFPYFVSFIASGVKSC 209
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRL--ADNHWELRD 236
++ L L+ +V L N + ++PY+ QL+ +V+ CL+ + L L ++HW LR
Sbjct: 210 SHDLKQLSRLLGMVSALTDNSSLFLDPYVIQLVTAVMYCLL-ETLTVSLNPVNDHWRLRR 268
Query: 237 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 296
A ++A + ++ + N L +L TL L D R H+GAV GL LG +
Sbjct: 269 DAACILAFLSRKCSNPVNYLHQQLLMTLREVLTDESRPYCSHFGAVVGLMELGSEALEQF 328
Query: 297 LLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYD 343
LLP+L Y L+ + + N V R EA VY ALL CI D
Sbjct: 329 LLPHLSTYWHQLQQVLEDDSSSNGVLRGEALHVYAALL----VCIKD 371
>gi|426252422|ref|XP_004019911.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Ovis aries]
Length = 562
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 171/339 (50%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 62 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAR-EGELYFPEDREVNLVELA 120
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 121 LATNIPKGCAETALRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 159
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 160 ---LTDDLLKYYQQVTR-AVLGDDPQLMKIALHDLQTNSKIAALLPYFVYVVSG-VKSVS 214
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 215 HDLEQLHRLLQVARSLVRNPHLCLVPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 273
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I YG + N L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 274 AALLLSHIFWTYGDLVNGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVL 333
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 334 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 372
>gi|358337993|dbj|GAA56324.1| transcription initiation factor TFIID subunit 6 [Clonorchis
sinensis]
Length = 684
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 153/325 (47%), Gaps = 58/325 (17%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGG--PLRF--RRAI---GYRDLFYLDDKD 53
M SRR DVD A L +E +G P+R R A G + F DK+
Sbjct: 125 MEQSRRGVPQASDVDLASVLIGLEAPFGSTPANFLPIRTGGRTATSGPGGKVFFIRPDKE 184
Query: 54 VEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP----------VQAIAAPSNGT 103
++ K ++ D S+V HWLA+ G QPV P+N P +I +G
Sbjct: 185 IDVKALLLREPAGVLYDVSVVAHWLAVNGKQPVSPQNPPPDFLARMRQFSGSIGKRESGQ 244
Query: 104 NNEQKD-------------------------------GLP-----VEIKLPVK-HILSRE 126
+ ++ D G+P I + + H +S+E
Sbjct: 245 SVDRNDAASEDSTHGKRPNPPLSASKVRTTADGDVVSGVPHPRTISSISVERRPHEVSQE 304
Query: 127 LQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL-- 184
+ +YF ++TE V + +AL + D GL P++PY F+ + V + N++L
Sbjct: 305 VMIYFRELTEACVGACEK-RRHEALDNATLDPGLQPILPYLVTFITEGVRVNVTNHNLAI 363
Query: 185 LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVA 243
L LMR+V L+ N HI +EPYLH L+P+V+TC++ ++L + + DNHW LRDF AK +
Sbjct: 364 LIYLMRLVKALVDNSHISLEPYLHLLVPTVITCVLNRQLCAKPITDNHWALRDFAAKQLV 423
Query: 244 AICKRYGHVYNTLQTRLTKTLLNAL 268
+C R+ N L R+T+ L ++L
Sbjct: 424 TLCNRHNTSTNELYNRVTRELSSSL 448
>gi|330688406|ref|NP_001193462.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Bos taurus]
gi|296471685|tpg|DAA13800.1| TPA: TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Bos taurus]
Length = 626
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 171/339 (50%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 62 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPAR-EGELYFPEDREVNLVELA 120
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 121 LATNIPKGCAETALRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 159
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 160 ---LTDDLLKYYQQVTR-AVLGDDPQLMKIALHDLQTNSKIAALLPYFVYVVSG-VKSVS 214
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 215 HDLEQLHRLLQVARSLVRNPHLCLVPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 273
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I YG + N L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 274 AALLLSHIFWTYGDLVNGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVL 333
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 334 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 372
>gi|432921343|ref|XP_004080111.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like [Oryzias
latipes]
Length = 637
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 196/422 (46%), Gaps = 44/422 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ NVE V G+ + L FR +LF++DD+++ ++
Sbjct: 55 MKHAKRKKLTVEDFNRALRWSNVEAVCGYGAQDALPFRSG-KEGELFFVDDREINLIELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T + + ++G K G+ ++ +P
Sbjct: 114 LATNIPKGCAETMVRVNVAYLDG-------------------------KGGVELQGAVPT 148
Query: 120 K-HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVS 176
LS +L Y+ +IT A+ D L K AL+ L ++S + L+PYF Y ++ VS
Sbjct: 149 AVQSLSDDLLKYYQQITR-AILGDDPHLMKVALLDLQSNSKIAALLPYFVYVISGVKSVS 207
Query: 177 RGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWEL 234
L + L ++R +L+QNP++ + Y+ L+ SV+ C++ N L D HW L
Sbjct: 208 HDLEQLNRLLHMVR---SLVQNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTL 263
Query: 235 RDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVR 294
RD+ A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V
Sbjct: 264 RDYAALLLSNIFWTHGDLVSGLYHQILLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVE 323
Query: 295 LLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSL 354
+L P+L Y + L+ + N + + +VYGA+L A +RL L SL
Sbjct: 324 KVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYGAILVAV-----ERLLKMKAL-SL 377
Query: 355 PARSVWKTNGIVATLSNK-RKTSMDLEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAA 413
W N +L+ +S L P A G + S P EE A +
Sbjct: 378 SHPGEWCFNAQTGSLAAAVGYSSPGLSPPPESLSEAAFGIASHLQAGSGGCPWEEWAPVS 437
Query: 414 TP 415
P
Sbjct: 438 LP 439
>gi|315013539|ref|NP_001186651.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Danio rerio]
Length = 641
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 172/341 (50%), Gaps = 35/341 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH++R L+ +D + AL+ N E V G+ + L FR + +LFY++D+++ ++
Sbjct: 55 MRHAKRRKLSVEDFNRALRWSNTETVCGYGAQDALPFR-PLKEGELFYVEDREINLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T + H ++G N E + +P ++
Sbjct: 114 LATNIPKGCAETMVRVHVSYLDG-------------------KGNLEPQGTVPTAVQ--- 151
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA--DEVSR 177
LS +L Y+ +IT A+ D L K AL+ L ++S + L+PYF Y ++ VS
Sbjct: 152 --SLSEDLLKYYQQITR-AILGEDPHLMKVALLDLQSNSKIAALLPYFVYVISGVKSVSH 208
Query: 178 GLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELR 235
L+ L L+ +V +L+QNP++ + Y+ L+ SV+ C++ N L D HW LR
Sbjct: 209 DLDQ---LNRLLHMVKSLVQNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTLR 264
Query: 236 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 295
D+ A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V
Sbjct: 265 DYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVER 324
Query: 296 LLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
+L P+L Y + L+ + N + + +VYGA+L A
Sbjct: 325 VLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|47209819|emb|CAF92633.1| unnamed protein product [Tetraodon nigroviridis]
Length = 628
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 171/344 (49%), Gaps = 35/344 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH++R LT +D + AL+ NVE V+G + FR ++ +LF ++D+DV ++
Sbjct: 45 MRHAKRRKLTVEDFNRALRWSNVEAVFGCGAQDATSFR-SLKEGELFLIEDRDVNLVELA 103
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T + + ++G N E + +P ++
Sbjct: 104 LATNIPKGCAETVVRVNVSYLDG-------------------KGNLENQGTVPTAVQ--- 141
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSR 177
LS EL Y+ ++T A+ D L K AL+ L ++S + L+PYF Y ++ VS
Sbjct: 142 --SLSDELLKYYQQVTR-AILGDDPHLMKVALLDLQSNSKIAALLPYFVYVISGVKSVSH 198
Query: 178 GLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELR 235
L L L+ +V +L++NP++ + Y+ L+ SV+ C++ N L D HW LR
Sbjct: 199 DLEQ---LNRLLHMVKSLVRNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTLR 254
Query: 236 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 295
D+ A L++ I +G + L ++ +L L DP R L HYGAV GL ALG V
Sbjct: 255 DYAALLLSHIFWIHGDLVGGLYHQVLLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVER 314
Query: 296 LLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQ 339
+L P+L Y + L+ + N + + +VYGA+L A Q
Sbjct: 315 VLFPHLPAYWANLQAVLDDNSVSNAQVKADGHKVYGAILVAVEQ 358
>gi|335281666|ref|XP_003353862.1| PREDICTED: LOW QUALITY PROTEIN: TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa
subunit 6L-like [Sus scrofa]
Length = 626
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 171/339 (50%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V D+
Sbjct: 62 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAR-EGELYFPEDREVNLVDLA 120
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 121 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 159
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 160 ---LTDDLLKYYQQVTR-AVLGDDPQLMKIALQDLQTNSKIAALLPYFVYVVSG-VKSVS 214
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 215 HDLEQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 273
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 274 AALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVL 333
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 334 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 372
>gi|46577508|sp|Q8R2K4.1|TAF6L_MOUSE RecName: Full=TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L; AltName:
Full=PCAF-associated factor 65-alpha; Short=PAF65-alpha
gi|20307033|gb|AAH28647.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor [Mus musculus]
gi|148701422|gb|EDL33369.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, isoform CRA_a [Mus musculus]
Length = 616
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 171/339 (50%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A DL++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAR-EGDLYFPEDREVSLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYQQVTR-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLPTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|346975529|gb|EGY18981.1| transcription initiation factor TFIID subunit 6 [Verticillium
dahliae VdLs.17]
Length = 394
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 171/346 (49%), Gaps = 62/346 (17%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR +RRTTLT D+ +AL++ +VEP+YG+ S PLR+ A +G + L+YL+D++V+F+
Sbjct: 57 MRAARRTTLTVGDIAQALRVLDVEPLYGYESTRPLRYGEASLGPGQPLYYLEDEEVDFEK 116
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLP 118
+I APLP+ P D S HWLAIEGVQP IP+N P+ + Q
Sbjct: 117 LINAPLPKVPRDMSFTAHWLAIEGVQPSIPQN--------PTTAESRSQD---------- 158
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
+HI+S+EL L RS ++ + S + PL P + ++V+
Sbjct: 159 -QHIISKEL-------GSLLWRRSKTLSSTTTQTTRWAGSAM-PLSPPSSR---NQVTHR 206
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 238
L++ L + + L++N ++ ++P R+F+
Sbjct: 207 LDDVFTLRRVKELTEALIENTNLLLDP------------------------TSTSSREFS 242
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLL 297
A L+ I RY + L+ +L +T L +DP + HYGA+ GLAA GP VR+L+
Sbjct: 243 ASLLGKIALRYAASNHLLRPKLVRTCLKFFMDPDKLPAAHYGAITGLAAAGGPEAVRVLV 302
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYD 343
L L Y + +L++ K++ + + + G +++A + D
Sbjct: 303 LKYLRAY-----SDEVLQRLKDKGEGLDFELLVGGIVRAIATLVAD 343
>gi|295317363|ref|NP_666204.2| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L isoform 1 [Mus musculus]
Length = 623
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 171/339 (50%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A DL++ +D++V ++
Sbjct: 62 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAR-EGDLYFPEDREVSLVELA 120
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 121 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 159
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 160 ---LTDDLLKYYQQVTR-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVS 214
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 215 HDLEQLHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 273
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 274 AALLLSHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVL 333
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 334 YPHLPTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 372
>gi|339234154|ref|XP_003382194.1| conserved hypothetical protein [Trichinella spiralis]
gi|316978834|gb|EFV61753.1| conserved hypothetical protein [Trichinella spiralis]
Length = 484
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 160/319 (50%), Gaps = 33/319 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLD-DKDVEFKDV 59
+R RR LTT D+ L+ R +P+ F +G L R I +D Y+D D+++E
Sbjct: 51 LRCGRR--LTTSDITRILRNRGAQPINFFGNGAYLPAR--IAGKDGLYVDVDEELELSTF 106
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLP------V 113
++ R PL++ + +WL E + E A V + A +Q++ L +
Sbjct: 107 LKDCNLRPPLESRLFAYWLLNENEET---EKARVDLMLAEKKVEIEQQQNALEERKQQRL 163
Query: 114 EIKLPV---KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
E P+ + +S+E+Q YF +TE V D K AL LA D+ L L+P+F F
Sbjct: 164 ECVYPMLCRPNSISKEMQSYFFTVTEACVCH-DEERRKLALAGLANDTSLKCLLPHFVSF 222
Query: 171 VADEVSRGL------NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG 224
+ RG+ +++ + LMR++ +L+NP + YLH+L+PS++ C + RL
Sbjct: 223 I----HRGILVNALGSSFVVCIYLMRMIDAILKNPSFNCDLYLHRLLPSMLNCALYTRLS 278
Query: 225 NR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQ 283
+ A+ HW LRDF+AK +A + + H L+TR+ K L + DP + YGAV
Sbjct: 279 AKPEANEHWRLRDFSAKNIAKVVSKNKH----LRTRVEKLLGRVINDPHSSFHNIYGAVA 334
Query: 284 GLAALGPNVVRLLLLPNLG 302
L LG + LLP+L
Sbjct: 335 TLVELGVEEIERTLLPSLN 353
>gi|395852462|ref|XP_003798757.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Otolemur
garnettii]
Length = 620
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 172/339 (50%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRSAR-EGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYQQVTR-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L ++ +L L+DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTHGDLVSGLYQQILLSLQKVLVDPVRPLCSHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|355723136|gb|AES07794.1| TAF6-like RNA polymerase II, p300/CBP-associated factor -associated
factor, 65kDa [Mustela putorius furo]
Length = 432
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 171/341 (50%), Gaps = 35/341 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 14 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAR-EGELYFPEDREVNLVELA 72
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 73 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 111
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSR 177
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ VS
Sbjct: 112 ---LTDDLLKYYQQVTR-AVLGDDPQLMKIALQDLQTNSKIAALLPYFVYVVSGVKSVSH 167
Query: 178 GLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELR 235
L L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LR
Sbjct: 168 DLEQ---LHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLR 223
Query: 236 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 295
D A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V
Sbjct: 224 DGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVER 283
Query: 296 LLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
+L P+L Y + L+ + N + + +VYGA+L A
Sbjct: 284 VLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 324
>gi|410974436|ref|XP_003993653.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Felis catus]
Length = 528
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 171/339 (50%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPA-REGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYQQVTR-AVLGDDPQLMKIALQDLQTNSKIAALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|427794891|gb|JAA62897.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 618
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 180/362 (49%), Gaps = 39/362 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRH++R LT +D++ AL+ + +P YG + PL FR I D+F DD V+ D +
Sbjct: 72 MRHAKRRKLTCNDMERALRWSDSQPSYGCSGDEPLPFRH-IREADVFCTDDSIVDLADEL 130
Query: 61 EAPLP-RAPLDTSIVCHWLAIEGV---------QPVIPENAPVQAIAAPSNGTNNEQKDG 110
++PL P + S+ WL +EGV P + E +AI N T+ +
Sbjct: 131 DSPLQLDLPPEPSVHGRWLVVEGVALEPDLDKPMPAVQETDGSKAIHTDVNATHMQ---- 186
Query: 111 LPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYF 170
Y+++IT+ A+ SD L AL LA++ L PL+PY +F
Sbjct: 187 -------------------YYEEITK-ALLGSDKQLVDVALEDLASNPCLSPLLPYLVHF 226
Query: 171 VADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIE--PYLHQLMPSVVTCLVAKRLGN-RL 227
V+ V + ++ + L L+ + L QN + ++ PY ++ +++ CL+
Sbjct: 227 VSLGVRKLSHDLASLDRLLHAIGALAQNTSLNLDTLPYPTMVVQALLFCLLEPLAAAINP 286
Query: 228 ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPK-RALTQHYGAVQGLA 286
A++HW LRD A+L+AA+ + + L+ ++ L + DP R L YGAV GL
Sbjct: 287 ANDHWALRDNAAQLLAALLRFWADRVAGLENQVLDALGECVRDPSLRPLCAQYGAVSGLT 346
Query: 287 ALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLK 346
ALG ++ +L P+LG Y LE + + N + +A RV+GALL AA + + ++ +
Sbjct: 347 ALGVEALQQVLGPHLGAYWRHLELVLADCRPANAQAQADATRVHGALLLAAEKLVKEQRR 406
Query: 347 IF 348
+
Sbjct: 407 VM 408
>gi|291409520|ref|XP_002721088.1| PREDICTED: TAF6-like RNA polymerase II [Oryctolagus cuniculus]
Length = 712
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 171/339 (50%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 146 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAR-EGELYFPEDREVNLVELA 204
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 205 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 243
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 244 ---LTDDLLKYYQQVTR-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVS 298
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 299 HDLEQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 357
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 358 AALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVL 417
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 418 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 456
>gi|301779984|ref|XP_002925422.1| PREDICTED: LOW QUALITY PROTEIN: TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa
subunit 6L-like [Ailuropoda melanoleuca]
Length = 529
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 170/339 (50%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAR-EGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYQQVTR-AVLGDDPQLMKIALQDLQTNSKIAALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L+ I +G + + L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLXXIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|73983375|ref|XP_533259.2| PREDICTED: TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa isoform 1 [Canis lupus
familiaris]
Length = 625
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 171/339 (50%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 62 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPAR-EGELYFPEDREVNLVELA 120
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 121 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 159
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 160 ---LTDDLLKYYQQVTR-AVLGDDPQLMKIALQDLQTNSKIAALLPYFVYVVSG-VKSVS 214
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 215 HDLEQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 273
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 274 AALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVL 333
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 334 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 372
>gi|157820939|ref|NP_001101045.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Rattus norvegicus]
gi|149062298|gb|EDM12721.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor (predicted) [Rattus norvegicus]
gi|197246841|gb|AAI68911.1| Taf6l protein [Rattus norvegicus]
Length = 623
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 171/339 (50%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 62 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPAR-EGELYFPEDREVNLVELA 120
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 121 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 159
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 160 ---LTDDLLKYYQQVTR-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVS 214
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 215 HDLEQLHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 273
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 274 AALLLSHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVL 333
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 334 YPHLPTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 372
>gi|348564202|ref|XP_003467894.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like [Cavia
porcellus]
Length = 745
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 172/341 (50%), Gaps = 35/341 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFAS--GGPLRFRRAIGYRDLFYLDDKDVEFKD 58
M+H++R LT +D + AL+ +VE V G+ S PLR R +L++ +D++V +
Sbjct: 202 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPTRE---GELYFPEDREVNLVE 258
Query: 59 VIEAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKL 117
+ A +P+ +T++ H ++G + P+ + A+++
Sbjct: 259 LALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS------------------- 299
Query: 118 PVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSR 177
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 300 -----LTDDLLKYYQQVTR-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKS 352
Query: 178 GLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELR 235
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LR
Sbjct: 353 VSHDLEQLHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLR 411
Query: 236 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 295
D A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V
Sbjct: 412 DGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVER 471
Query: 296 LLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
+L P+L Y + L+ + N + + +VYGA+L A
Sbjct: 472 VLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 512
>gi|431910358|gb|ELK13431.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Pteropus alecto]
Length = 621
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 170/339 (50%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L + +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAR-EGELCFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYQQVTR-AVLGDDPQLMKIALQDLQTNSKIAALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|351699183|gb|EHB02102.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L, partial [Heterocephalus
glaber]
Length = 365
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 170/339 (50%), Gaps = 35/339 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPA-REGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A LP+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNLPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA--DEVSR 177
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ VS
Sbjct: 153 ---LTDDLLKYYQQVTR-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSH 208
Query: 178 GLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELR 235
L L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LR
Sbjct: 209 DLEQ---LHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLR 264
Query: 236 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 295
D A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V
Sbjct: 265 DGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVER 324
Query: 296 LLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALL 334
+L P+L Y + L+ + N + + +VYGA+L
Sbjct: 325 VLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAIL 363
>gi|410906721|ref|XP_003966840.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like
[Takifugu rubripes]
Length = 639
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 171/344 (49%), Gaps = 35/344 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ NVE ++G + FR ++ +LF ++D+DV ++
Sbjct: 55 MKHAKRRKLTVEDFNRALRWSNVEAIFGCGAQDATPFR-SLKDGELFLVEDRDVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T + + ++G N E + +P ++
Sbjct: 114 LATNIPKGCAETVVRVNVSYLDG-------------------KGNLESQGTVPTAVQ--- 151
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSR 177
LS EL Y+ ++T A+ D L K AL+ L ++S + L+PYF Y ++ VS
Sbjct: 152 --SLSDELMKYYQQVTR-AILGDDPHLMKVALLDLQSNSKIAALLPYFVYVISGVKSVSH 208
Query: 178 GLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELR 235
L L L+ +V +L++NP++ + Y+ L+ SV+ C++ N L D HW LR
Sbjct: 209 DLEQ---LNRLLHMVKSLVRNPYLYLGSYVRSLVSSVMYCILEPLAASINPLND-HWTLR 264
Query: 236 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 295
D+ A L++ I +G + L ++ +L L DP R L HYGAV GL ALG V
Sbjct: 265 DYAALLLSHIFWIHGDLVGGLYHQVLLSLQKVLSDPVRPLCSHYGAVVGLHALGWKAVER 324
Query: 296 LLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQ 339
+L P+L Y + L+ + N + + +VYGA+L A Q
Sbjct: 325 VLFPHLPAYWANLQAVLDDNSVSNAQVKADGHKVYGAILVAVEQ 368
>gi|397517251|ref|XP_003828830.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Pan
paniscus]
Length = 573
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 169/339 (49%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPA-REGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYHQVTR-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L + +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|355566389|gb|EHH22768.1| PCAF-associated factor 65-alpha [Macaca mulatta]
Length = 622
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 169/339 (49%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYHQVTR-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L + +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|380787061|gb|AFE65406.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Macaca mulatta]
gi|383413521|gb|AFH29974.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Macaca mulatta]
gi|384943890|gb|AFI35550.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Macaca mulatta]
Length = 622
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 169/339 (49%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYHQVTR-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L + +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|158260021|dbj|BAF82188.1| unnamed protein product [Homo sapiens]
Length = 622
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 169/339 (49%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYHQVTR-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLGQLHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L + +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|426368911|ref|XP_004051444.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Gorilla
gorilla gorilla]
Length = 694
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 169/339 (49%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYHQVTR-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L + +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|332836744|ref|XP_001142675.2| PREDICTED: TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Pan troglodytes]
gi|410217404|gb|JAA05921.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Pan troglodytes]
gi|410259762|gb|JAA17847.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Pan troglodytes]
gi|410293910|gb|JAA25555.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Pan troglodytes]
gi|410352299|gb|JAA42753.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Pan troglodytes]
Length = 622
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 169/339 (49%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYHQVTR-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L + +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|5453844|ref|NP_006464.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Homo sapiens]
gi|46577572|sp|Q9Y6J9.1|TAF6L_HUMAN RecName: Full=TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L; AltName:
Full=PCAF-associated factor 65-alpha; Short=PAF65-alpha
gi|3335559|gb|AAC39905.1| PCAF associated factor 65 alpha [Homo sapiens]
gi|119594499|gb|EAW74093.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa, isoform CRA_a [Homo
sapiens]
gi|119594500|gb|EAW74094.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa, isoform CRA_a [Homo
sapiens]
gi|189067267|dbj|BAG36977.1| unnamed protein product [Homo sapiens]
Length = 622
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 169/339 (49%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYHQVTR-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L + +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|403255124|ref|XP_003920297.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L isoform 2
[Saimiri boliviensis boliviensis]
Length = 634
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 67 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELA 125
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 126 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 164
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 165 ---LTDDLLKYYQQVT-WAVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVS 219
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 220 HDLGQLHRLLQVARSLFRNPHLCLAPYVRCLVGSVLYCVLEPLAASINPLND-HWILRDA 278
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + L + +L L DP R L HYGAV GL ALG V +L
Sbjct: 279 AALLLSHIFWTHGDHVSGLYQHILLSLQKILADPVRPLCSHYGAVVGLHALGWKAVERVL 338
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 339 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 377
>gi|403255122|ref|XP_003920296.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L isoform 1
[Saimiri boliviensis boliviensis]
Length = 622
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYQQVT-WAVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLGQLHRLLQVARSLFRNPHLCLAPYVRCLVGSVLYCVLEPLAASINPLND-HWILRDA 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + L + +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTHGDHVSGLYQHILLSLQKILADPVRPLCSHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|402893067|ref|XP_003909725.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Papio
anubis]
Length = 622
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 169/339 (49%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +V+ V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVDAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYHQVTR-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L + +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|296218538|ref|XP_002755482.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L [Callithrix
jacchus]
Length = 622
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 31/339 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYQQVT-WAVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLGQLHRLLQVARSLFRNPHLCLAPYVRCLVGSVLYCVLEPLAASINPLND-HWILRDA 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + L + +L L DP R L HYGAV GL ALG V +L
Sbjct: 267 AALLLSHIFWTHGDHVSGLYQHILLSLQKILADPVRPLCSHYGAVVGLHALGWKAVERVL 326
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 327 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 365
>gi|148235636|ref|NP_001085716.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa [Xenopus laevis]
gi|49115232|gb|AAH73241.1| MGC80584 protein [Xenopus laevis]
Length = 574
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 166/341 (48%), Gaps = 36/341 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
+RHSRR LT +D + AL+ NVE V G S + +R +I D Y +D+++ ++
Sbjct: 55 LRHSRRRRLTVEDFNRALRWSNVEAVCGHGSSDAVTYR-SIKDGDCHYTEDREINLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G N E + +P + L
Sbjct: 114 LATNIPKGTPETAVRVHVSYLDG-------------------KGNLEHQGTVPAAVSL-- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA--DEVSR 177
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ VS
Sbjct: 153 ---LTDDLLKYYQRVTR-AVLGDDPHLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSH 208
Query: 178 GLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA--DNHWELR 235
L S L L+R +LL NP + + Y LM SV+ C V + L + ++HW LR
Sbjct: 209 DLEQLSRLLQLVR---SLLWNPFLYLGHYGCSLMQSVLYC-VTEPLAASINPLNDHWTLR 264
Query: 236 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 295
D+ A L++ I + + ++ ++ ++L L DP R L HYGAV GL ALG V
Sbjct: 265 DYGAGLLSLIWT-HQDLAGSMYPQILQSLQKVLGDPVRPLCSHYGAVVGLHALGWKSVEQ 323
Query: 296 LLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
+L P L Y + L+ + N + + +VYGA+L A
Sbjct: 324 ILYPLLPTYWAGLQTVLDDHSMSNAQVKADGHKVYGAILVA 364
>gi|301607335|ref|XP_002933254.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like isoform
1 [Xenopus (Silurana) tropicalis]
gi|301607337|ref|XP_002933255.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like isoform
2 [Xenopus (Silurana) tropicalis]
Length = 574
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 166/341 (48%), Gaps = 36/341 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
+RHSRR LT +D + AL+ NVE V G S + +R +I D Y +D+++ ++
Sbjct: 55 LRHSRRRRLTVEDFNRALRWSNVEAVCGHGSPDSVTYR-SIKDGDCHYTEDREINLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G N E + +P + L
Sbjct: 114 LATNIPKGTPETAVRVHVSYLDG-------------------KGNLEHQGTVPAAVSL-- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA--DEVSR 177
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ VS
Sbjct: 153 ---LTDDLLKYYQRVTR-AVLGDDPHLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSH 208
Query: 178 GLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA--DNHWELR 235
L S L L+R +LL NP + + Y LM SV+ C V + L + ++HW LR
Sbjct: 209 DLEQLSRLLQLVR---SLLWNPFLYLGYYGCSLMQSVLYC-VTEPLAASINPLNDHWTLR 264
Query: 236 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 295
D+ A L++ I + + +L ++ ++L L DP R L HYGAV GL ALG V
Sbjct: 265 DYGAGLLSLIWT-HQDLAGSLYPQILQSLQKVLGDPVRPLCSHYGAVVGLHALGWKAVEQ 323
Query: 296 LLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
+L P L Y + L+ + N + + +VYGA+L A
Sbjct: 324 ILYPLLPTYWAGLQTVLDDHSMSNAQVKADGHKVYGAILVA 364
>gi|299115204|emb|CBN74035.1| transcription initiation factor TFIID subunit 6 [Ectocarpus
siliculosus]
Length = 578
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 168/377 (44%), Gaps = 54/377 (14%)
Query: 4 SRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP 63
+R+ LT DDV +L+LR E SGG + + + D D V+ + V A
Sbjct: 50 GKRSRLTVDDVTASLELRGAEGSL-VCSGGGSKSKDS----DDSATADGKVDLRKVANAT 104
Query: 64 LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQK------------DGL 111
LP P++ HWLA++G QP++P+N P+ PS+G + G
Sbjct: 105 LPVCPIEPGFHMHWLAVDGQQPLLPQN-PL-----PSSGRGKGKSGKRGRGKQGGGGAGG 158
Query: 112 PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFV 171
V+ LS EL Y + + +SR D +AL SL D GL L+P+ F+
Sbjct: 159 SGGGSSAVRARLSEELTTYLRRCCDAILSR-DEPKRSRALASLREDPGLQQLLPHLCTFI 217
Query: 172 ADEVSRGLNNYS---LLFALMRVVWNLLQNPHIQ-IEPYLHQLMPSVVTCLVA---KRLG 224
+V L L AL++++ LL N + +E YL +L+P +++CL+ +R G
Sbjct: 218 QTKVPEYLKRQKEPDQLAALLQMLQCLLNNKNFAFLEIYLDRLLPPLMSCLLHIDFERAG 277
Query: 225 ----------------------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTK 262
R HW++RD+ A+L+ AIC ++G+ Y TLQ R
Sbjct: 278 LDTGGSANSDSSSFGGMGVHSAARPKWTHWDVRDYAAELLRAICDKHGNTYPTLQARAND 337
Query: 263 TLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVK 322
+ PK LT YGA+ G+A LG V L P + + L + + K
Sbjct: 338 MFDTHVARPKTRLTTLYGAITGVACLGRMPVEQTLGPRVDSLADKISQSCLAATLRRDTK 397
Query: 323 R-HEAWRVYGALLQAAG 338
EA + ALL+A G
Sbjct: 398 SVTEANQCRIALLRAIG 414
>gi|351696059|gb|EHA98977.1| Transcription initiation factor TFIID subunit 6 [Heterocephalus
glaber]
Length = 381
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 124/262 (47%), Gaps = 75/262 (28%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGG--PLRFRRAIGYRDLFYLDDKDVEFKD 58
M +R LTT D+D ALKL NVEP+YGF + P RF A
Sbjct: 85 MHMGKRQKLTTSDIDYALKLENVEPLYGFHAQEFIPFRFASA------------------ 126
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI-------------- 96
HWL++EG QP IPEN P V+A
Sbjct: 127 -----------------HWLSMEGCQPAIPENPPPAPKEQQKVEATEPLKSAKPGQEKDG 169
Query: 97 --------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSD 143
A P++ E+K +G + +K H LS E QLY+ +ITE V
Sbjct: 170 PLKGKGQGATPADSKRKEKKAPRLLEGASLHLKPHSIHELSVEQQLYYKEITEAYVGSCK 229
Query: 144 SVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNLLQNPHI 201
+ +AL S+ATD GL+ ++P F+ F+++ V + NN +LL LMR+V L+ NP +
Sbjct: 230 AERV-EALQSIATDPGLYQMLPRFSTFISERVCVNVAQNNLALLIYLMRMVKALMDNPTL 288
Query: 202 QIEPYLHQLMPSVVTCLVAKRL 223
+E Y+H+L+P+V+TC+V K +
Sbjct: 289 YLEKYVHELIPAVMTCIVQKYI 310
>gi|443917577|gb|ELU38272.1| transcription initiation factor TFIID complex 60 kDa subunit
[Rhizoctonia solani AG-1 IA]
Length = 610
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 159/355 (44%), Gaps = 76/355 (21%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDL----FYLDDKDVEFK 57
RH+RR+T++ D+D+ P+YG +S FRRA+ L ++L+D++++F
Sbjct: 128 RHARRSTMSPADIDQ--------PLYGHSSAHTPTFRRAVPQHTLSQSVYFLEDEEIDFD 179
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNN-----EQKDGLP 112
++ + P HWLAIEG+QP++PEN A + T +K G+
Sbjct: 180 KALKEEVITVPPPVRYTAHWLAIEGIQPLVPENPTTSAETKTATTTQGPPSPRARKQGIA 239
Query: 113 VEIKLP------------VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGL 160
VKH+L RELQLY D+++ +S ++ AL SL D+GL
Sbjct: 240 APTTTNSTTAASTSAATLVKHVLPRELQLYHDRLSSALISGNERK-RTAALSSLRADAGL 298
Query: 161 HPLVPYFTYFVADEVSRGLN-----------------------NYSLLFALMRVVWNLLQ 197
L+PY ++ + V R L + + L ++ + LL
Sbjct: 299 QALLPYLIRWIGETVVRVLKGEGATHTGDDGSDDDAMFGSDELDRAKLDIMLDALKALLD 358
Query: 198 NPHIQIEPY----------------LHQLMPSVVTCLVAKRLGNRLADNHW-------EL 234
N + +EPY LHQ+MP +++ L+ LG+ + + + +
Sbjct: 359 NKTLFVEPYVSVGKIASPLSNTFLQLHQIMPPILSILLTASLGSSSSFSSFDSNPPPRHV 418
Query: 235 RDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALG 289
R A L++ + +G Y +L R+ KTL+ P R GA++GLAALG
Sbjct: 419 RMHAASLLSHVLNLHGPTYPSLGARVLKTLIIGATAPGRQRGTREGALRGLAALG 473
>gi|345308690|ref|XP_001520250.2| PREDICTED: transcription initiation factor TFIID subunit 6-like
[Ornithorhynchus anatinus]
Length = 408
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 119/210 (56%), Gaps = 16/210 (7%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFR-RAIGYRDLFYLDDKDVEFKDV 59
M+ LTT+DVD AL+L+NVEP+YGF + + FR + G R+L + V D+
Sbjct: 58 MQMGLHQKLTTNDVDFALQLKNVEPLYGFHTMDFIPFRLTSGGGRELGSFQKEIVSLNDI 117
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
I +PLP+ LD + HWL+IEG+QPVIPEN P GT +
Sbjct: 118 INSPLPQTSLDVVLKAHWLSIEGIQPVIPEN--------PIPGTERPPPYPPQPTAIIRC 169
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSR 177
+ ++YF++IT + D + K+AL SL T+SGL ++P+F+ F+++ V+
Sbjct: 170 SPL----EKMYFEEITRACLGACD-LKRKEALDSLTTNSGLSQMLPWFSNFISEGVRVNV 224
Query: 178 GLNNYSLLFALMRVVWNLLQNPHIQIEPYL 207
GL + ++L +LM++V L+ NP + +E Y+
Sbjct: 225 GLRDLTVLTSLMQMVKALMANPTLNLERYV 254
>gi|134026098|gb|AAI35738.1| Unknown (protein for MGC:121670) [Xenopus (Silurana) tropicalis]
Length = 237
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 97/178 (54%), Gaps = 34/178 (19%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LT +D+D ALKL+NVEP+YGF + L FR A G R+L + ++K+V+ D+
Sbjct: 56 MHVGKRQKLTPNDIDAALKLKNVEPIYGFHAKEFLPFRYASGGGRELHFYEEKEVDLSDI 115
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN--------------APVQAI--------- 96
I PLPR PLD SI HWL+IEGVQP IPEN P++A+
Sbjct: 116 ISTPLPRVPLDVSIKAHWLSIEGVQPAIPENPPPVTKEQQKSEATEPLKAVKPGQEEGGL 175
Query: 97 ------AAPSNGTNNEQK----DGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDS 144
A + G E+K +G P+++K H LS E QLY+ +ITE V ++
Sbjct: 176 KGKGQGAGAAEGKGKEKKTPILEGAPLKLKPRSIHELSVEQQLYYKEITEACVGSCEA 233
>gi|324511760|gb|ADY44890.1| Transcription initiation factor TFIID subunit 6 [Ascaris suum]
Length = 452
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 174/386 (45%), Gaps = 58/386 (15%)
Query: 3 HSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYR-----------DLFYLDD 51
H RR LTTDD++ A ++ E + G + R+++ Y+ ++F +D
Sbjct: 63 HCRRAHLTTDDIESAFRIFGQEAILGHDNS-----RKSVVYKSVADSAEMLDHEVFIAED 117
Query: 52 KDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAI----------AA 98
+V+ + + P+ PL I HWL +G Q +P+N P + + A
Sbjct: 118 AEVDMAAIANSKPPKPPLCPMIRAHWLVYDGEQIYVPQNPIIVPKRIVRLEEHEERFNAI 177
Query: 99 PSNGTN---NEQKDGLPVEIKLPVK---------------HILSRELQLYFDKITELAVS 140
P++ + G + +L ++ H LS E Q +F + E V
Sbjct: 178 PTSSRRESLTQMSSGASIAYRLAMRSTRKAERIYVKPSSSHQLSLEQQRFFRDVLEACVG 237
Query: 141 RSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL--LFALMRVVWNLLQN 198
D +AL SL D+GL L+P + ++A V + SL L ++ LL N
Sbjct: 238 LDDKRRV-EALESLQMDTGLQSLLPNISRWLAQGVYANIIQRSLAMLIYIVHAHAALLHN 296
Query: 199 PHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQ 257
+ I P LH+++PS+++C+++++L +R DNHW LRDF +K + + + +G V +T Q
Sbjct: 297 RSLDIHPVLHEMVPSLLSCMISRQLCSRPDIDNHWTLRDFASKCLVQLVREHG-VCDT-Q 354
Query: 258 TRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQ 317
R+ + L ++ + YGA L L + R P+ L ++P +
Sbjct: 355 KRVQQALRYCFMNSSSSANMRYGAFHALFDLSASAERAAFYPHFIEVLHSVDPNVTASMP 414
Query: 318 KNEVKRHEAWRVYGALL---QAAGQC 340
+R ++ ++Y L+ QA +C
Sbjct: 415 NQ--RRIDSEKLYALLVRYEQAMSKC 438
>gi|353239066|emb|CCA70991.1| related to TAF6-Subunit (60 kDa) of TFIID and SAGA complexes
[Piriformospora indica DSM 11827]
Length = 525
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 161/325 (49%), Gaps = 64/325 (19%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA----IGYRD-----LFYLDDK 52
RH +RTT+ T D+D AL+ N+EP+YG S P FRRA G +++++D+
Sbjct: 63 RHGKRTTMNTQDIDLALQSLNIEPLYGHLSHMPTVFRRANPNPAGTNSKVAAPVYFVEDE 122
Query: 53 DVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN--------------APVQAIAA 98
+V+F V+ P + HWLA+EG+QP+ +N +P +++ A
Sbjct: 123 EVDFDKVLRDEKVTLPKMVNWHAHWLAVEGIQPLTADNPPRPPLSEQKGRKQSPPRSVLA 182
Query: 99 P------SNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFK---- 148
P G N + K PVKH+LSRELQ+Y+ ++T + + S+ +
Sbjct: 183 PVAPAMQGAGANRKYK---------PVKHVLSRELQIYYSRLTAALLPPASSITDEAQQN 233
Query: 149 ----QALVSLATDSGLHPLVPYFTYFVADEVSRGLNNY--------------SLLFALMR 190
AL SL D+GL L+PY +V V + N L L++
Sbjct: 234 ARRTAALASLQYDAGLQNLLPYLVRWVGQSVVTAIRNMDERERASKAADATGETLEILLK 293
Query: 191 VVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYG 250
V+ L+QN + IEPYLHQ++P +++ L+ L N LR ++++A I ++G
Sbjct: 294 VIHALIQNERLFIEPYLHQILPPLLSILLTS----SLPANPPTLRRDASEILAFISLQHG 349
Query: 251 HVYNTLQTRLTKTLLNALLDPKRAL 275
Y +L RLTKTLL ALL P + L
Sbjct: 350 TTYPSLSERLTKTLLLALLAPSKHL 374
>gi|119596996|gb|EAW76590.1| TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 80kDa, isoform CRA_c [Homo sapiens]
Length = 165
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFT 238
NN +LL LMR+V L+ NP + +E Y+H+L+P+V+TC+V+++L R DNHW LRDF
Sbjct: 36 NNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFA 95
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNV 292
A+LVA ICK + N +Q+R+TKT + +D K T YG++ GLA LG +V
Sbjct: 96 ARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELGHDV 149
>gi|392311681|pdb|4ATG|A Chain A, Taf6 C-Terminal Domain From Antonospora Locustae
Length = 196
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 106/184 (57%), Gaps = 10/184 (5%)
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
H+L +ELQLYFDKI L++ +SD + A+ L +SGL LVPYF +++ + +
Sbjct: 3 HMLPKELQLYFDKI--LSMIKSD--MKDIAIECLEKESGLQQLVPYFIQHISELILKSFK 58
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAK 240
+L + + ++L++N H+ I+PYLHQ++PS++TC++ G + D+ ++R +A
Sbjct: 59 EAEVLKTCIALYFSLIKNKHVFIDPYLHQILPSLLTCVI----GKSIVDD--DVRKMSAD 112
Query: 241 LVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPN 300
+V I Y Y TL R+ KTL +DP R+ YGA+ L+ L NVV ++ +
Sbjct: 113 IVKYIYDTYSRSYKTLAPRVLKTLKGVWMDPNRSEDSQYGALYCLSILSKNVVNTVIREH 172
Query: 301 LGPY 304
Y
Sbjct: 173 AEEY 176
>gi|164655815|ref|XP_001729036.1| hypothetical protein MGL_3824 [Malassezia globosa CBS 7966]
gi|159102925|gb|EDP41822.1| hypothetical protein MGL_3824 [Malassezia globosa CBS 7966]
Length = 350
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 128/266 (48%), Gaps = 60/266 (22%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGF---ASGGPLR---FRR--AIGYRDLFYLDDK 52
M+H++RT +TT D+D AL+ +N+EP+YGF +GG + FR L+ L+D+
Sbjct: 79 MKHAKRTRMTTSDIDHALRQKNIEPLYGFYPPYTGGKKQGPWFRTVPTTSGAPLYVLEDE 138
Query: 53 DVEFKDVIEAPLPRAPLDTSIV--CHWLAIEGVQPVIPEN-APVQAIAAPSNGTNNEQKD 109
++ F+ ++E PR + + HWLAIEGVQP IPEN P+ A ++ T+
Sbjct: 139 EINFEHILEHG-PRVGVGRGVGWHAHWLAIEGVQPPIPENPVPLTRKMAGTDDTSLADAG 197
Query: 110 GLPVE-----IKLPVKHILSRELQLYFDKITELAVS------------------------ 140
E +K VKH+LSRELQLY++++T +S
Sbjct: 198 EAAAELGNTAVKPLVKHVLSRELQLYYERLTSSILSPPTDAETETGTALPQEGMPLSNYS 257
Query: 141 --RSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL-----------------NN 181
S +++ AL SL D+G+H LVPY +V V+ L +
Sbjct: 258 DISSGNLVRDAALSSLRGDAGIHQLVPYLIQWVGSNVTHSLRLPPTAQDPEKKLEEQKHT 317
Query: 182 YSLLFALMRVVWNLLQNPHIQIEPYL 207
LL ++ + LL N I IEPY+
Sbjct: 318 IQLLHTMLSTLHALLVNTSIFIEPYV 343
>gi|334332576|ref|XP_003341613.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like isoform
2 [Monodelphis domestica]
Length = 590
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 157/339 (46%), Gaps = 56/339 (16%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ NVE V G+ S L R A DL++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSNVEAVCGYGSQETLPLRPAR-EGDLYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G V P+ + A+++
Sbjct: 114 LATNIPKGCPETAVRVHVSYLDGKGNVEPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K VS
Sbjct: 153 ---LTDDLLKYYQQVTR-AVLGDDPQLMKVKSVS-------------------------- 182
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +LL+NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 183 HDLEQLHRLLQVARSLLRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 241
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + N L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 242 AALLLSHIFWTHGDLVNGLSQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVL 301
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 302 YPHLSTYWANLQAVLDDYSVSNAQVKADGHKVYGAILVA 340
>gi|281200383|gb|EFA74603.1| TATA-binding protein-associated-factor [Polysphondylium pallidum
PN500]
Length = 382
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIG-YRDLFYLDDKDVEFKDV 59
M+H++R LTTDD++ ALKLRN+E +YG+ + P +F + + + ++++ DK++ F+D+
Sbjct: 48 MKHAKREYLTTDDINNALKLRNIEVLYGYGASEPYKFSKVLSPSQAIYFVHDKELLFQDI 107
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNG 102
I PLP+ P + S+ HWLA+EGVQP+IP+N P Q++ P N
Sbjct: 108 IAQPLPKCPREPSLAAHWLALEGVQPLIPQNPPPQSMLDPFNN 150
>gi|402582574|gb|EJW76519.1| hypothetical protein WUBG_12569 [Wuchereria bancrofti]
Length = 195
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 101/189 (53%), Gaps = 29/189 (15%)
Query: 44 RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVC---------HWLAIEGVQPVIPEN-AP- 92
RDLF DD+D+E V+ AP + PL+T+I C HWL I+GVQP +PEN AP
Sbjct: 3 RDLFVTDDRDIEITPVVNAPAAKLPLETNIKCKYKNNLVLAHWLVIDGVQPAVPENPAPV 62
Query: 93 VQAIAAPSNGTNNEQKD-GLP--------------VEIKLPVKHILSRELQLYFDKITEL 137
VQ AA T D GL V+IK H LS E Q++F +ITE
Sbjct: 63 VQKEAAVVVATEKAAVDTGLSILSKAHRGLRQTEQVQIKTTSTHALSVEQQVFFKEITE- 121
Query: 138 AVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVWNL 195
A+ SD +AL SL TD+GL L+P F+ + + V + +N ++L LMR++ +L
Sbjct: 122 AIMGSDDTRRTEALYSLQTDAGLQQLLPRFSVVIVEGVRCNIVQHNLAILIYLMRMIQSL 181
Query: 196 LQNPHIQIE 204
NP + +E
Sbjct: 182 ANNPALSLE 190
>gi|195391944|ref|XP_002054619.1| GJ24553 [Drosophila virilis]
gi|194152705|gb|EDW68139.1| GJ24553 [Drosophila virilis]
Length = 397
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 123/219 (56%), Gaps = 6/219 (2%)
Query: 123 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--N 180
LS+E Q +F ITE + S+ + AL L++DS L P++P + F+ + V +
Sbjct: 124 LSKEQQEFFVLITETCMGISEPTR-RDALQRLSSDSSLQPMLPKLSLFIGEAVKVNVVQQ 182
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA-DNHWELRDFTA 239
N++LL LMR+V +LL NP+++++ YLH +P+V++C V++++ A NHW LR++ A
Sbjct: 183 NFALLLYLMRMVHSLLVNPNLKLQNYLHLFIPAVLSCTVSRQVCAFPAVQNHWALREYAA 242
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
++A + K + N++ R+ L +LT YG++ GL+ +G VR ++P
Sbjct: 243 NIMAELVKTFDSDDNSIMPRVINIYKAGL--QSSSLTTIYGSLIGLSKMGKYAVRGCVIP 300
Query: 300 NLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAG 338
+ +++E + E+ N++ + A + LL+ +
Sbjct: 301 QIRAISAIIEMHLTKEESDNDLNKQAAIYIRHRLLKMSA 339
>gi|392579185|gb|EIW72312.1| hypothetical protein TREMEDRAFT_70674 [Tremella mesenterica DSM
1558]
Length = 486
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 162/343 (47%), Gaps = 55/343 (16%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVY---------GFASGGPLRFRRAIG--YRDLFYL 49
M H++RTTLT+DDV+ A+++ N+EP+ FA ++ G ++Y
Sbjct: 53 MVHAKRTTLTSDDVEYAMEVLNLEPILVPPRPLPQPTFAQ---VQIPTVSGNSTHTIYYA 109
Query: 50 DDKDVEFKDVIEAPLPRAPLDTSIV---CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNE 106
D +++F ++ PLP ++ V HWLA+EGVQP IPEN APS ++
Sbjct: 110 PDDEIDFATYLKQPLPPGLASSAGVKWKAHWLAVEGVQPAIPEN------PAPSARVDST 163
Query: 107 QKDGLP----VEIKLPVKHILSRELQLYFDKITELAVSR---------SDSVLFKQ---A 150
LP ++ + L +ELQLYF ++T V + S + +Q A
Sbjct: 164 SPLTLPSTGSAALRPSARSHLPQELQLYFGRLTAAIVPSTSPPPSPDGTISDVERQRLAA 223
Query: 151 LVSLATDSGLHPLVPYFTYFVADEVSRGLNN-YSLLFALMRVVWNLLQNPHIQIEPYLHQ 209
L SL D + ++ Y ++A+ V + L + +L L+ + LL N + +EPYLHQ
Sbjct: 224 LASLRGDQAVGGILVYLVKWIAESVQKCLMSPVQVLGYLLDAMEALLDNEAVFVEPYLHQ 283
Query: 210 LMPSVVTCLVAKRLG------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKT 263
L+ +++ L+ LG ++ +E R + ++ I Y Y L RL T
Sbjct: 284 LLAPLMSILLTVPLGPHPPTSSQQITAAYETRLRASDVLRKIVDDYSSSYPNLTPRLLST 343
Query: 264 LLNALL-DP--------KRALTQHYGAVQGLAALGPNVVRLLL 297
L AL DP ++ GA+ G++ALG + VR L
Sbjct: 344 LSQALQSDPFPSPLGANHPPAGRYEGALLGISALGSHAVRTCL 386
>gi|430814304|emb|CCJ28448.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 180
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI---GYRDLFYLDDKDVEFK 57
MRH++RT LT D+ AL++ NVEP+YG+ + P+RF ++ G L+YL+D DVEF
Sbjct: 50 MRHAKRTILTVSDISHALRVLNVEPLYGYHAFRPVRFGESLLEQGQPPLYYLEDDDVEFD 109
Query: 58 DVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPV 93
VI APLP+ P D S HWLAIEGVQP IP+N V
Sbjct: 110 KVIHAPLPKVPRDISYSVHWLAIEGVQPAIPQNPSV 145
>gi|444711067|gb|ELW52021.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L [Tupaia chinensis]
Length = 820
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 157/339 (46%), Gaps = 56/339 (16%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V D+
Sbjct: 297 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAR-EGELYFPEDREVNLVDLA 355
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 356 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 394
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K VS
Sbjct: 395 ---LTDDLLKYYQQVTR-AVLGDDPQLMKVKSVS-------------------------- 424
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 425 HDLEQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 483
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 484 AALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVL 543
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 544 YPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 582
>gi|295317365|ref|NP_001171269.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L isoform 2 [Mus musculus]
Length = 598
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 157/339 (46%), Gaps = 56/339 (16%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A DL++ +D++V ++
Sbjct: 62 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAR-EGDLYFPEDREVSLVELA 120
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 121 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 159
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K VS
Sbjct: 160 ---LTDDLLKYYQQVTR-AVLGDDPQLMKVKSVS-------------------------- 189
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 190 HDLEQLHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 248
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 249 AALLLSHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVL 308
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 309 YPHLPTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 347
>gi|148701423|gb|EDL33370.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, isoform CRA_b [Mus musculus]
Length = 604
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 157/339 (46%), Gaps = 56/339 (16%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A DL++ +D++V ++
Sbjct: 68 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAR-EGDLYFPEDREVSLVELA 126
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 127 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 165
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K VS
Sbjct: 166 ---LTDDLLKYYQQVTR-AVLGDDPQLMKVKSVS-------------------------- 195
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 196 HDLEQLHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 254
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 255 AALLLSHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVL 314
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 315 YPHLPTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 353
>gi|26345988|dbj|BAC36645.1| unnamed protein product [Mus musculus]
Length = 591
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 157/339 (46%), Gaps = 56/339 (16%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A DL++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAR-EGDLYFPEDREVSLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K VS
Sbjct: 153 ---LTDDLLKYYQQVTR-AVLGDDPQLMKVKSVS-------------------------- 182
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L++NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 183 HDLEQLHRLLQVARSLIRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 241
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
A L++ I +G + + L ++ +L L DP R L HYGAV GL ALG V +L
Sbjct: 242 AALLLSHIFWTHGDLVSGLYQQILLSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVL 301
Query: 298 LPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 302 YPHLPTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 340
>gi|194746737|ref|XP_001955833.1| GF16042 [Drosophila ananassae]
gi|190628870|gb|EDV44394.1| GF16042 [Drosophila ananassae]
Length = 539
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 122/227 (53%), Gaps = 15/227 (6%)
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
++ L+RE Q +++ ITE +V S+S + AL +++ D + L+P + F+AD + +
Sbjct: 160 RYPLTREQQCFYEMITENSVGLSESRRHR-ALHTMSLDPSVEVLLPRLSRFIADSTAVNI 218
Query: 180 --NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDF 237
N +L MR+V LL N I + YLH ++P+V++CL+AK L +R ++ HW LR++
Sbjct: 219 VQRNMPMLLYTMRMVRALLGNSRISLYKYLHLILPAVLSCLLAKEL-SRGSEEHWALREY 277
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+ ++A I + + +++ +R+ AL + LT +GAV G +G VR +
Sbjct: 278 SGNIMAEIVRHFKSTDSSILSRVVSIYKQALT--MKPLTTVFGAVIGFGKMGNYAVRACI 335
Query: 298 LPNLGPYLSLLEPEML---------LEKQKNEVKRHEAWRVYGALLQ 335
+P + +EP + L+KQ ++ RH +V +L+
Sbjct: 336 VPQIAYLAERIEPHLATSADNASSKLDKQASKYIRHRLVKVCTPVLK 382
>gi|297688428|ref|XP_002821688.1| PREDICTED: LOW QUALITY PROTEIN: TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa
subunit 6L [Pongo abelii]
Length = 623
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 168/342 (49%), Gaps = 36/342 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELA 113
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 114 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ S
Sbjct: 153 ---LTDDLLKYYHQVTR-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSGXKSVS- 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALT--QHYGAVQ-GLAALGPNVVR 294
A L++ I +G + + L + + L +LD A +HYG+ + G LG V R
Sbjct: 267 AALLLSHIFWTHGDLVSGLYQHILLS-LQKILDRSCAACSARHYGSREWGCMLLGVAVER 325
Query: 295 LLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
+L P+L Y + L+ + N + + +VYGA+L A
Sbjct: 326 -VLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 366
>gi|349803133|gb|AEQ17039.1| putative transcription initiation factor tfiid subunit 6 [Pipa
carvalhoi]
Length = 126
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
M +R LT D+D ALKL+NVEP+YGF + L FR A G R+L + ++K+V+ D+
Sbjct: 10 MHVGKRQKLTPSDIDSALKLKNVEPIYGFHAKEFLPFRYASGGGRELPFYEEKEVDLSDI 69
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP 92
I PLPR P+D S+ HWL+IEGVQP IPEN P
Sbjct: 70 ISTPLPRVPMDVSLKAHWLSIEGVQPAIPENPP 102
>gi|302408599|ref|XP_003002134.1| transcription initiation factor TFIID complex 60 kDa subunit
[Verticillium albo-atrum VaMs.102]
gi|261359055|gb|EEY21483.1| transcription initiation factor TFIID complex 60 kDa subunit
[Verticillium albo-atrum VaMs.102]
Length = 398
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 73/105 (69%), Gaps = 2/105 (1%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKDVEFKD 58
MR +RRTTLT D+ +AL++ +VEP+YG+ S PLR+ A +G + L+YL+D++V+F+
Sbjct: 131 MRAARRTTLTVGDIAQALRVLDVEPLYGYESTRPLRYGEASLGPGQPLYYLEDEEVDFEK 190
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGT 103
+I APLP+ P D S HWLAIEGVQP IP+N + + P T
Sbjct: 191 LINAPLPKVPRDMSFTAHWLAIEGVQPSIPQNPTHRRVPKPGVAT 235
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Query: 195 LLQNPHIQIEPYLHQLMPSVVTCLVAKRLG-NRLADNHWELRDFTAKLVAAICKRYGHVY 253
L++N ++ ++PY + + V+TCL+ ++LG + + +ELR+F+A L+ I RY
Sbjct: 239 LIENTNLFLDPYANAIAAPVLTCLLGRKLGADDATKDQYELREFSASLLGKIALRYAASN 298
Query: 254 NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL-GPNVVRLLLLPNL 301
+ L+ +L +T L +DP + HYGA+ GLAA GP VR+L+L L
Sbjct: 299 HLLRPKLVRTCLKFFMDPDKLPAAHYGAITGLAAAGGPEAVRVLVLKYL 347
>gi|332250027|ref|XP_003274155.1| PREDICTED: LOW QUALITY PROTEIN: TAF6-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa
subunit 6L [Nomascus leucogenys]
Length = 629
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 161/349 (46%), Gaps = 42/349 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++
Sbjct: 53 MKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPA-KEGELYFPEDREVNLVELA 111
Query: 61 EAP-LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
A +P+ +T++ H ++G + P+ + A+++
Sbjct: 112 LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS--------------------- 150
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYF-----------T 168
L+ +L Y+ ++T AV D L K VS G F +
Sbjct: 151 ---LTDDLLKYYHQVTR-AVLGDDPQLMK---VSEWAQVGAQSXTCKFYELFFFFFLRQS 203
Query: 169 YFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN-RL 227
+ + +V ++ S L++V +L NPH+ + PY+ L+ SV+ C++ +
Sbjct: 204 FALVSQVGVQWHDLSSPHRLLQVARSLFXNPHLCLGPYVRCLVGSVLYCVLEPLAASINP 263
Query: 228 ADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAA 287
++HW LRD A L++ I +G + + L + +L L DP R L HYGAV GL A
Sbjct: 264 XNDHWTLRDGAALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHA 323
Query: 288 LGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
LG V +L P+L Y + L+ + N + + +VYGA+L A
Sbjct: 324 LGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 372
>gi|297267614|ref|XP_002799526.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L-like [Macaca
mulatta]
Length = 593
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 152/326 (46%), Gaps = 32/326 (9%)
Query: 15 DEALKLRN-VEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP-LPRAPLDTS 72
D +LR + V G+ S L R A +L++ +D++V ++ A +P+ +T+
Sbjct: 39 DVCYRLREATQAVCGYGSQEALPMRPAR-EGELYFPEDREVNLVELALATNIPKGCAETA 97
Query: 73 IVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFD 132
+ H ++G + P+ + A+++ L+ +L Y+
Sbjct: 98 VRVHVSYLDGKGNLAPQGSVPSAVSS------------------------LTDDLLKYYH 133
Query: 133 KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 192
++T AV D L K AL L T+S + L+PYF Y V+ V ++ L L++V
Sbjct: 134 QVTR-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSG-VKSVSHDLEQLHRLLQVA 191
Query: 193 WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYG 250
+L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD A L++ I +G
Sbjct: 192 RSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTHG 250
Query: 251 HVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEP 310
+ + L + +L L DP R L HYGAV GL ALG V +L P+L
Sbjct: 251 DLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLXXXXXXXXX 310
Query: 311 EMLLEKQKNEVKRHEAWRVYGALLQA 336
N + + +VYGA+L A
Sbjct: 311 XXXXXXXXNAQVKADGHKVYGAILVA 336
>gi|119594502|gb|EAW74096.1| TAF6-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65kDa, isoform CRA_c [Homo
sapiens]
Length = 509
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 114/218 (52%), Gaps = 9/218 (4%)
Query: 123 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLN 180
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ VS L
Sbjct: 40 LTDDLLKYYHQVTR-AVLGDDPQLMKVALQDLQTNSKIGALLPYFVYVVSGVKSVSHDLE 98
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFT 238
L L++V +L +NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 99 Q---LHRLLQVARSLFRNPHLCLGPYVRCLVGSVLYCVLEPLAASINPLND-HWTLRDGA 154
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
A L++ I +G + + L + +L L DP R L HYGAV GL ALG V +L
Sbjct: 155 ALLLSHIFWTHGDLVSGLYQHILLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLY 214
Query: 299 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQA 336
P+L Y + L+ + N + + +VYGA+L A
Sbjct: 215 PHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVA 252
>gi|195044977|ref|XP_001991913.1| GH17238 [Drosophila grimshawi]
gi|193901671|gb|EDW00538.1| GH17238 [Drosophila grimshawi]
Length = 735
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 5/202 (2%)
Query: 113 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 172
V K + H L +E +F ITE +D+ + AL L D+ + ++P F+A
Sbjct: 439 VRFKSVMGHHLKKEQHQFFIHITESCTGPNDTAR-RNALKVLREDASICRILPELCRFIA 497
Query: 173 DEVSRG--LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADN 230
D V+ L N +LL LM++V L N +++I+P+LH L+P+VVTC VA +L
Sbjct: 498 DAVNLNVVLKNLTLLSYLMQMVAILHCNANLRIQPFLHLLIPAVVTCQVANKLSTAKDKY 557
Query: 231 HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGP 290
HW+LR++ +++ + ++ + N + RL + L K +LT YG++ GL ALG
Sbjct: 558 HWQLREYACEIMGQLINKFANSTNRMVPRLMNVYKSGL--EKSSLTTIYGSLIGLQALGD 615
Query: 291 NVVRLLLLPNLGPYLSLLEPEM 312
+ ++P + L+EP +
Sbjct: 616 TAIYGCVIPKIRDISKLIEPHL 637
>gi|324506090|gb|ADY42608.1| Transcription initiation factor TFIID subunit 6 [Ascaris suum]
Length = 346
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 151/333 (45%), Gaps = 42/333 (12%)
Query: 45 DLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN---APVQAI----- 96
++F +D +V+ + + P+ PL I HWL +G Q +P+N P + +
Sbjct: 5 EVFIAEDAEVDMAAIANSKPPKPPLCPMIRAHWLVYDGEQIYVPQNPIIVPKRIVRLEEH 64
Query: 97 -----AAPSNGTN---NEQKDGLPVEIKLPVK---------------HILSRELQLYFDK 133
A P++ + G + +L ++ H LS E Q +F
Sbjct: 65 EERFNAIPTSSRRESLTQMSSGASIAYRLAMRSTRKAERIYVKPSSSHQLSLEQQRFFRD 124
Query: 134 ITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSL--LFALMRV 191
+ E V D +AL SL D+GL L+P + ++A V + SL L ++
Sbjct: 125 VLEACVGLDDKRRV-EALESLQMDTGLQSLLPNISRWLAQGVYANIIQRSLAMLIYIVHA 183
Query: 192 VWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYG 250
LL N + I P LH+++PS+++C+++++L +R DNHW LRDF +K + + + +G
Sbjct: 184 HAALLHNRSLDIHPVLHEMVPSLLSCMISRQLCSRPDIDNHWTLRDFASKCLVQLVREHG 243
Query: 251 HVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEP 310
V +T Q R+ + L ++ + YGA L L + R P+ L ++P
Sbjct: 244 -VCDT-QKRVQQALRYCFMNSSSSANMRYGAFHALFDLSASAERAAFYPHFIEVLHSVDP 301
Query: 311 EMLLEKQKNEVKRHEAWRVYGALL---QAAGQC 340
+ +R ++ ++Y L+ QA +C
Sbjct: 302 NVTASMPNQ--RRIDSEKLYALLVRYEQAMSKC 332
>gi|195568452|ref|XP_002102230.1| GD19609 [Drosophila simulans]
gi|194198157|gb|EDX11733.1| GD19609 [Drosophila simulans]
Length = 570
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 111/187 (59%), Gaps = 7/187 (3%)
Query: 123 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--N 180
LS E Q +F+ +TE V +S + AL +L+TD L L+P T F+AD V+ +
Sbjct: 164 LSMEQQNFFELVTEACVGDLESRRVR-ALKALSTDPSLEDLLPRLTKFIADAVAINMAQQ 222
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTA 239
N SLL LMR+V LL+N + YLH L+P+V++CL+AK++ + ++HW LR+++
Sbjct: 223 NLSLLLYLMRMVQALLKNQRFSLLQYLHLLLPAVLSCLLAKQVCASPDLEDHWALREYSG 282
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
+++ I +++ N + RL AL K++LT +GAV GL +G +VVR +LP
Sbjct: 283 NIISQIVRQFDAAGNGILPRLIGVYKKAL--SKKSLTTVFGAVLGLGKMGSHVVRACILP 340
Query: 300 NLGPYLS 306
L YLS
Sbjct: 341 QLK-YLS 346
>gi|119936348|gb|ABM06111.1| TAF6-like RNA polymerase II [Bos taurus]
Length = 291
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 103/194 (53%), Gaps = 8/194 (4%)
Query: 147 FKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVWNLLQNPHIQIE 204
K AL L T+S + L+PYF Y V+ VS L L L++V +L++NPH+ +
Sbjct: 1 MKIALHDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQ---LHRLLQVARSLVRNPHLCLV 57
Query: 205 PYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTK 262
PY+ L+ SV+ C++ N L D HW LRD A L++ I YG + N L ++
Sbjct: 58 PYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIFWTYGDLVNGLYQQILL 116
Query: 263 TLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVK 322
+L L DP R L HYGAV GL ALG V +L P+L Y + L+ + N
Sbjct: 117 SLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQV 176
Query: 323 RHEAWRVYGALLQA 336
+ + +VYGA+L A
Sbjct: 177 KADGHKVYGAILVA 190
>gi|195343681|ref|XP_002038424.1| GM10624 [Drosophila sechellia]
gi|194133445|gb|EDW54961.1| GM10624 [Drosophila sechellia]
Length = 588
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 112/189 (59%), Gaps = 11/189 (5%)
Query: 123 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN-- 180
LS E Q +F+ +TE V +S + AL +L+TD L L+P T F+AD V G+N
Sbjct: 182 LSMEQQNFFELVTEACVGDLESRRVR-ALQALSTDPSLEDLLPRLTKFIADAV--GINMA 238
Query: 181 --NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDF 237
N SLL LMR+V LL+N + YLH L+P+V++CL+AK++ + ++HW LR++
Sbjct: 239 QQNLSLLLYLMRMVQALLKNQRFSLLQYLHLLLPAVLSCLLAKQVCASPDLEDHWALREY 298
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+ +++ + +++ N + RL AL K++LT +GAV GL +G +VVR +
Sbjct: 299 SGNIISQVVRQFDAAGNGILPRLIGVYKKAL--SKKSLTTVFGAVLGLGKMGSHVVRACI 356
Query: 298 LPNLGPYLS 306
LP L YLS
Sbjct: 357 LPQL-KYLS 364
>gi|343424876|emb|CBQ68414.1| related to TAF6-Subunit (60 kDa) of TFIID and SAGA complexes
[Sporisorium reilianum SRZ2]
Length = 725
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 90/178 (50%), Gaps = 40/178 (22%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGF--------ASGGPLRFRRAIGYRD------- 45
MRHS+R L T D+D AL+ RN+EP+YGF + P R+ +R
Sbjct: 97 MRHSKRDQLKTTDIDAALRARNIEPIYGFLPSSSGRSGASNPSRYTAGPTFRRVQTASGV 156
Query: 46 -LFYLDDKDVEFKDVIEAPLPRAPLDTSI--VCHWLAIEGVQPVIPENAPVQAIAAPSNG 102
L Y++D++++F ++EA P+ + + HWLAIEGVQP +P+N AIA G
Sbjct: 157 PLHYVEDEEIDFDKILEAG-PKIGIGRGVGWGAHWLAIEGVQPAVPQNPSPIAIAEAKGG 215
Query: 103 TN--------------------NEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVS 140
+ DG + L VKHILSRELQLY++++T+ VS
Sbjct: 216 SGFMGPTSTQPAAAAPAAKAVTVAGGDGQAIAKPL-VKHILSRELQLYYERLTKSIVS 272
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 47/167 (28%)
Query: 150 ALVSLATDSGLHPLVPYFTYFVADEV---------------------------SRGLN-- 180
AL SL D GLH LVPY FV +V SR ++
Sbjct: 349 ALASLRGDPGLHQLVPYLIQFVGSKVIEILRSPSTDDSAADADGASTATAVRESRQISAA 408
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN--------------- 225
+ +L L+ + +L NPHI IEPYLHQ+MPS+++ L+ L
Sbjct: 409 DNHMLSVLLSTIHAILVNPHIFIEPYLHQMMPSILSILLTSSLAEPELLRQLQGSDDVHT 468
Query: 226 ---RLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 269
+ + LR + L+ + +G Y TL+ R+ TLL AL+
Sbjct: 469 PLVTAGPSSYALRAHASALLTHVVDTFGSSYPTLKPRVVATLLKALM 515
>gi|154416709|ref|XP_001581376.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915603|gb|EAY20390.1| hypothetical protein TVAG_110020 [Trichomonas vaginalis G3]
Length = 434
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 179/387 (46%), Gaps = 44/387 (11%)
Query: 3 HSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDD--------KDV 54
S L+ +DV EA R P G+ R R+AI Y + + D K +
Sbjct: 53 QSNHKKLSVEDVSEAFNARGFNPFLGY------RNRKAIKYETVGQVGDTVISIPVDKQL 106
Query: 55 EFKDVIEAPLPRAPLDTSIVCHWLA-IEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPV 113
+ +++ PL P + HWLA I G QP+IPEN + P + NN P
Sbjct: 107 DLSEIVNTPLKETPTEKFFSFHWLAVIRGQQPLIPEN--LNDTTVPGSTHNNIY--APPP 162
Query: 114 EIKLPVKHI--------LSRELQLYFDKITELAVS-RSDSVLFKQALVSLATDSGLHPLV 164
++KL + + +S+EL ++ + V+ R L K+ L +D+ + PL+
Sbjct: 163 QMKLSDQSVQITSTRNEVSQELYTHYYHLIAPNVNPRKKIPLLKE----LQSDAAIIPLL 218
Query: 165 PYFTYFVADEVSRGLNNYSLLFA-LMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 223
PYF ++++ S +N + F + + L+ N +++++ YL Q++ +T L+
Sbjct: 219 PYFFHYLSSHYSSNNSNITAAFDDRINLARALILNDNLKLDMYLIQIINLSITSLLMS-- 276
Query: 224 GNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQ-HYGAV 282
N + LR+ +A+L++ + +Y +Y TL+TR+T L+ +D K Q GA
Sbjct: 277 FNDPVVESFSLRENSAELLSLVINKYSQIYPTLRTRITDHLVKTFIDRKNGNFQVKLGAA 336
Query: 283 QGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCI- 341
GL+ +G +VVR +++P ++ L+ + L + K + ++ LL+ G
Sbjct: 337 IGLSVIGSHVVRKVIIPQFPRIMNSLDEQKLPAETKIQF-----FKFKSILLKICGDSFH 391
Query: 342 YDRLKIFPPLSS--LPARSVWKTNGIV 366
YD + S LPA + N ++
Sbjct: 392 YDTEEAIKQTGSPNLPAETAQMYNNLI 418
>gi|195109658|ref|XP_001999400.1| GI24488 [Drosophila mojavensis]
gi|193915994|gb|EDW14861.1| GI24488 [Drosophila mojavensis]
Length = 440
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 6/194 (3%)
Query: 123 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--N 180
LS+E Q +F ITE + S+ ++AL SL TDS L P++ + F+ + V +
Sbjct: 170 LSKEQQEFFLVITEACMGNSEFAR-REALHSLRTDSSLQPMLYRLSLFIGEAVKVNVAQK 228
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTA 239
N++LL LMR+V N+L NPH+Q+ YLH L+PSV++C V++++ NH R++
Sbjct: 229 NFALLIYLMRMVQNVLFNPHLQLHNYLHLLVPSVLSCAVSRQICAFPTVQNHCAAREYAT 288
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
++A + YG+ N + R+ N L L YG++ GL+ +G +R ++P
Sbjct: 289 NIMADFIRAYGYPGNDILPRVISVYKNGL--KSSILMTIYGSLVGLSKMGRYAIRDCVIP 346
Query: 300 NLGPYLSLLEPEML 313
+ ++P ++
Sbjct: 347 EIRSLSEGIQPYLI 360
>gi|62083798|gb|AAX62619.1| putative TBP-associated protein [Trichomonas vaginalis]
Length = 438
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 152/347 (43%), Gaps = 12/347 (3%)
Query: 4 SRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP 63
+R LT +D++ AL+ ++P++G++S G L DD V+
Sbjct: 52 CKRNRLTVNDINIALESLRIQPLFGYSSQIEPELVDVNGDNKLLAYDDSFVQIDQYGRRE 111
Query: 64 LPRAPLDTSIVCHWLAIEGV----QPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
LP PL TS W+A+ GV Q V +N A Q +
Sbjct: 112 LPAYPLATSYDIDWIALNGVGHKNQEVTEDNNENNENAQLKQANQYRQFIQDSDAFVVSN 171
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALV--SLATDSGLHPLVPYFTYFVADEVSR 177
KH S Q +F + + +S + K+ L+ L+ + LVPY+ F +
Sbjct: 172 KHQFSFTHQKFFRESRDALLSTNQ---LKKELMFYKLSRLDCIQMLVPYYVRFTLVQFRN 228
Query: 178 GLNNYSLLFALMRVVWNLLQNPHIQ-IEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRD 236
N ++ L++ + L+QNP ++ IE YL + ++ L+ + +R+
Sbjct: 229 HSNEWNTLYSSLCTARALVQNPELKNIERYLQSFITIALSFLLNSDILRTNVVGLIRIRE 288
Query: 237 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 296
A+ + IC + + Y +Q +T L++ L+DP R++++ YGA GL A G +
Sbjct: 289 LAAEYLVVICDKISNGYPMVQPHITSQLISVLVDPARSVSEKYGAFCGLNAFGSETIARF 348
Query: 297 LLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYD 343
+LP++ + L + + +N R A Y AL+ A G C+Y+
Sbjct: 349 VLPHIDVIVKDLVKGPMRDGDRN--IRIVAATYYDALVNAVGLCLYN 393
>gi|405120527|gb|AFR95297.1| transcription initiation factor TFIID complex 60 kDa subunit
[Cryptococcus neoformans var. grubii H99]
Length = 520
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 150/335 (44%), Gaps = 41/335 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVY------GFASGGPLRFRRAIGY---RDLFYLDD 51
M H++R+TL +DV+ AL+ NVEP+ S PL + ++ D
Sbjct: 54 MVHAKRSTLMPEDVEHALEALNVEPILIPPRPLAIPSFHPLNLPPPAANMPPQTIYTTPD 113
Query: 52 KDVEFKDVIEAPLPRAPLDTSIV---CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQK 108
+++F ++ PLP ++ V HWLA+EGVQP +PEN +I A G ++
Sbjct: 114 DEIDFASYLKEPLPAGIASSAGVKWKAHWLAVEGVQPAVPENPAPSSIHA-GAGAGGQRV 172
Query: 109 DGLP----VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ-------ALVSLATD 157
G P +K + L +ELQLYF ++T V + ++ + AL SL D
Sbjct: 173 KGAPAPASTTLKPSARAHLPQELQLYFTRLTTALVPPTATLPESEPERHRLAALASLRND 232
Query: 158 SGLHPLVPYFTYFVADEVSRGLNNYSLLFA-LMRVVWNLLQNPHIQIEPYLHQLMPSVVT 216
+ ++ Y ++ + + + L + L+ V LL N + IEPY+HQL+P +++
Sbjct: 233 VAVAGMLVYVVKWLCESIQKCLMAPTASIGHLVDAVGALLANEGLFIEPYMHQLLPPLLS 292
Query: 217 CLVAKRLGNRLADNH-------WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 269
++ LG + E+R + +++ I + Y L RL T AL
Sbjct: 293 IILTVPLGPHPPQSAASSQPSPTEIRSRASDVLSKIASTFSPSYPGLIPRLVSTFTKALH 352
Query: 270 DP---------KRALTQHYGAVQGLAALGPNVVRL 295
P ++ GA+ L LGP V++
Sbjct: 353 SPPFPSPLGAANPPTGRYEGAILALGGLGPQAVKV 387
>gi|123479321|ref|XP_001322819.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121905672|gb|EAY10596.1| hypothetical protein TVAG_281960 [Trichomonas vaginalis G3]
Length = 438
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 151/345 (43%), Gaps = 8/345 (2%)
Query: 4 SRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP 63
+R LT +D++ AL+ ++P++G++S G L DD V+
Sbjct: 52 CKRNRLTVNDINIALESLRIQPLFGYSSQIEPELVDVNGDNKLLAYDDSFVQIDQYGRRE 111
Query: 64 LPRAPLDTSIVCHWLAIEGV----QPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
LP PL TS W+A+ GV Q V +N A Q +
Sbjct: 112 LPAYPLATSYDIDWIALNGVGHKNQEVTEDNNENNENAQLKQANQYRQFIQDSDAFVVSN 171
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
KH S Q +F + + +S ++ + + L+ + LVPY+ F +
Sbjct: 172 KHQFSFTHQKFFRESRDALLS-TNQLKKELMFYKLSRLDCIQMLVPYYVRFTLVQFRDHS 230
Query: 180 NNYSLLFALMRVVWNLLQNPHIQ-IEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFT 238
N ++ L++ + L+QNP ++ IE YL + ++ L+ + +R+
Sbjct: 231 NEWNTLYSSLCTARALVQNPELKNIERYLQSFITIALSFLLNPDILRTNVVGLIRIRELA 290
Query: 239 AKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
A+ + IC + + Y +Q +T L++ L+DP R++++ YGA GL A G + +L
Sbjct: 291 AEYLVVICDKISNGYPMVQPHITSQLISVLVDPARSVSEKYGAFCGLNAFGSETIARFVL 350
Query: 299 PNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIYD 343
P++ + L + + +N R A Y AL+ A G C+Y+
Sbjct: 351 PHIDVIVKDLVKGPMRDGDRN--IRIVAATYYDALVNAVGLCLYN 393
>gi|443686648|gb|ELT89843.1| hypothetical protein CAPTEDRAFT_177124 [Capitella teleta]
Length = 387
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 159/341 (46%), Gaps = 34/341 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKD-V 59
M H +R L+ D++ AL ++ P+ G S + + + ++ +D DV +
Sbjct: 62 MEHGKRRKLSVADLNRALLQKDCAPICGHGSPDSVHWVH-VKEAEVTAAEDNDVLLGNFA 120
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIP-ENAPVQAIAAPSNGTNNEQKDGLPVEIKLP 118
+ LP + S+ W+A+EG Q P N PV + A P N
Sbjct: 121 CNSELPTRNGNVSLQAQWIAVEGFQKTNPASNTPVTS-AKPRN----------------- 162
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
L ELQ +++ +T+ A+ DS+L AL L T++ + PL+ F+ + + +
Sbjct: 163 ----LLEELQHHYELLTK-AILSCDSLLTHSALEDLKTNTRIVPLLRNLVNFITNGIRKL 217
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIE--PYLHQLMPSVVTCLV---AKRLGNRLADNHWE 233
++ L L+ V +LL+N I +E PY+ L+ V C V ++ +R + W
Sbjct: 218 NHDPCRLLCLLYAVNSLLRNKIIYLESQPYMAVLVDCVRHCAVEPLSQSSKSRF--DQWI 275
Query: 234 LRDFTAKLVAAICKRYGHV-YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNV 292
+RD+ A+L+A + + V L+ ++T+ L L DP + HYGAV L A+G
Sbjct: 276 MRDYAARLLAFMIQSVLKVPVIKLKHQVTQGLNKILADPTKPFCSHYGAVSILTAIGAQS 335
Query: 293 VRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGAL 333
+LP++ S L+ + + N ++ +A RV GA+
Sbjct: 336 FEKCVLPHVVTLWSHLQTAIEDCSKSNVRQKMDAIRVCGAI 376
>gi|406697734|gb|EKD00987.1| hypothetical protein A1Q2_04674 [Trichosporon asahii var. asahii
CBS 8904]
Length = 783
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 163/352 (46%), Gaps = 47/352 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI----GYR----DLFYLDDK 52
M H +RTTL +DV+ A++ +VEPV P A+ G + L++ D
Sbjct: 355 MVHGKRTTLLPEDVEHAMEALSVEPVIVPPRPLPQAPFHAVPVPGGSQGPAGQLYHEIDD 414
Query: 53 DVEFKDVIEAPLPRAPLDTSIV---CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD 109
+++F ++ PLP A +++ V HWLA+EGVQP IPEN A + P+ Q
Sbjct: 415 EIDFATYLKEPLPPALANSAGVKWKAHWLAVEGVQPAIPENPAPTARSGPT----RPQPT 470
Query: 110 GLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSV--------------LFKQ------ 149
++ K L+ ELQLYF ++T V + ++ F +
Sbjct: 471 TGSAALRQNAKTHLTTELQLYFSRLTAALVPSTAALAQLPGNPAPGSTAHAFPEAERHRL 530
Query: 150 -ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS-LLFALMRVVWNLLQNPHIQIEPY- 206
AL S+ +D+ + ++ Y +V++ +++ L + + L+ VV +L N + +EPY
Sbjct: 531 AALASVRSDAAVAGVLAYLIRWVSESITKCLMGATGTIGCLIDVVEAILDNDVLFVEPYF 590
Query: 207 LHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLN 266
L L+ ++T + + ++LR + ++A + +Y Y L RL TL
Sbjct: 591 LGPLLSILLTVPLGPHPVTGPGPSPFDLRSRASDVLAKLVSQYAATYPGLIPRLLSTLTK 650
Query: 267 ALLDP---------KRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE 309
AL P ++ GAV G++ALGP VR L G L++++
Sbjct: 651 ALQAPPFPSPLGADHPPAGRYEGAVLGISALGPQSVRSTLWGKRGEGLAVID 702
>gi|25013131|gb|AAN71679.1| SD16013p, partial [Drosophila melanogaster]
Length = 566
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 127/234 (54%), Gaps = 19/234 (8%)
Query: 81 EGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE---IKLPVKHILSRELQLYFDKITEL 137
E VQ +PE P ++ P T L VE +K ++ LS E Q +F+ +TE
Sbjct: 146 ESVQESVPEPVPETSLEPPPMHTG-----WLKVEQVLLKPSKRYPLSMEQQNFFEFVTEA 200
Query: 138 AVS--RSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVW 193
V S VL AL +++TD L L+P T F+AD V+ + N LL LMR+V
Sbjct: 201 CVGDLESRRVL---ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLYLMRMVR 257
Query: 194 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAICKRYGHV 252
LL N + YLH L+P+V++CL+AK++ + +++HW LR+++ ++A I +++
Sbjct: 258 ALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALREYSGNIMAHIVRQFDAA 317
Query: 253 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 306
N + R+ ALL K+ LT +GAV GL +G + VR +LP L YLS
Sbjct: 318 DNGILPRVIGVYNKALL--KKPLTTVFGAVIGLGKMGNHAVRACILPQLK-YLS 368
>gi|45550693|ref|NP_649547.3| meiosis I arrest, isoform A [Drosophila melanogaster]
gi|221377901|ref|NP_001138010.1| meiosis I arrest, isoform B [Drosophila melanogaster]
gi|45446367|gb|AAF52013.3| meiosis I arrest, isoform A [Drosophila melanogaster]
gi|220903002|gb|ACL83469.1| meiosis I arrest, isoform B [Drosophila melanogaster]
Length = 589
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 127/234 (54%), Gaps = 19/234 (8%)
Query: 81 EGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE---IKLPVKHILSRELQLYFDKITEL 137
E VQ +PE P ++ P T L VE +K ++ LS E Q +F+ +TE
Sbjct: 142 ESVQESVPEPVPETSLEPPPMHTG-----WLKVEQVLLKPSKRYPLSMEQQNFFELVTEA 196
Query: 138 AVS--RSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVW 193
V S VL AL +++TD L L+P T F+AD V+ + N LL LMR+V
Sbjct: 197 CVGDLESRRVL---ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLYLMRMVR 253
Query: 194 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAICKRYGHV 252
LL N + YLH L+P+V++CL+AK++ + +++HW LR+++ ++A I +++
Sbjct: 254 ALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALREYSGNIMAHIVRQFDAA 313
Query: 253 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 306
N + R+ ALL K+ LT +GAV GL +G + VR +LP L YLS
Sbjct: 314 DNGILPRVIGVYNKALL--KKPLTTVFGAVIGLGKMGNHAVRACILPQLK-YLS 364
>gi|363987306|gb|AEW43895.1| FI17401p1 [Drosophila melanogaster]
Length = 594
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 127/234 (54%), Gaps = 19/234 (8%)
Query: 81 EGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE---IKLPVKHILSRELQLYFDKITEL 137
E VQ +PE P ++ P T L VE +K ++ LS E Q +F+ +TE
Sbjct: 147 ESVQESVPEPVPETSLEPPPMHTG-----WLKVEQVLLKPSKRYPLSMEQQNFFELVTEA 201
Query: 138 AVS--RSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVW 193
V S VL AL +++TD L L+P T F+AD V+ + N LL LMR+V
Sbjct: 202 CVGDLESRRVL---ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLYLMRMVR 258
Query: 194 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAICKRYGHV 252
LL N + YLH L+P+V++CL+AK++ + +++HW LR+++ ++A I +++
Sbjct: 259 ALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALREYSGNIMAHIVRQFDAA 318
Query: 253 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 306
N + R+ ALL K+ LT +GAV GL +G + VR +LP L YLS
Sbjct: 319 DNGILPRVIGVYNKALL--KKPLTTVFGAVIGLGKMGNHAVRACILPQLK-YLS 369
>gi|211938737|gb|ABK30921.2| RT01020p [Drosophila melanogaster]
Length = 594
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 126/234 (53%), Gaps = 19/234 (8%)
Query: 81 EGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE---IKLPVKHILSRELQLYFDKITEL 137
E VQ +PE P + P T L VE +K ++ LS E Q +F+ +TE
Sbjct: 147 ESVQESVPEPVPETPLEPPPMHTG-----WLKVEQVLLKPSKRYPLSMEQQNFFELVTEA 201
Query: 138 AVS--RSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVW 193
V S VL AL +++TD L L+P T F+AD V+ + N LL LMR+V
Sbjct: 202 CVGDLESRRVL---ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLYLMRMVR 258
Query: 194 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAICKRYGHV 252
LL N + YLH L+P+V++CL+AK++ + +++HW LR+++ ++A I +++
Sbjct: 259 ALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALREYSGNIMAHIVRQFDAA 318
Query: 253 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 306
N + R+ ALL K+ LT +GAV GL +G + VR +LP L YLS
Sbjct: 319 DNGILPRVIGVYNKALL--KKPLTTVFGAVIGLGKMGNHAVRACILPQLK-YLS 369
>gi|388855779|emb|CCF50563.1| related to TAF6-Subunit (60 kDa) of TFIID and SAGA complexes
[Ustilago hordei]
Length = 700
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 90/178 (50%), Gaps = 40/178 (22%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGF---ASG------------GPLRFRRAIGYRD 45
MRHS+R L T D+D AL+ RN+EP+YGF +SG GP FRR
Sbjct: 94 MRHSKRDQLKTTDIDAALRARNIEPIYGFLPSSSGRSSTNIASKYTAGPT-FRRVQTSSG 152
Query: 46 --LFYLDDKDVEFKDVIEAPLPRAPLDTSIV--CHWLAIEGVQPVIPENAPVQAIAAPSN 101
L Y++D++++F ++EA P+ + + HWLAIEGVQP +P+N AIA
Sbjct: 153 VPLHYVEDEEIDFDKILEAG-PKIGIGRGVGWGAHWLAIEGVQPAVPQNPSPIAIAEAKG 211
Query: 102 GTN------------------NEQKDGLPVEIKLP-VKHILSRELQLYFDKITELAVS 140
T G I P VKHILSRELQLY++++T+ VS
Sbjct: 212 ATGFMGSTTTQPGAAAPAAKAVTVAGGEGQAIAKPLVKHILSRELQLYYERLTKSIVS 269
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 85/213 (39%), Gaps = 65/213 (30%)
Query: 150 ALVSLATDSGLHPLVPYFTYFVADEV------------------------SRGLN--NYS 183
AL SL D GLH LVPY FV +V SR ++ +
Sbjct: 337 ALASLRGDPGLHQLVPYLIQFVGSKVIEILRSPSEENEADGESVSTAVRESRQISTADNH 396
Query: 184 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN------------------ 225
+L L+ + +L NPHI IEPYLHQ+MPS+++ L+ L
Sbjct: 397 MLGVLLSTIHAILVNPHIFIEPYLHQMMPSILSVLLTSSLAEPELHRQLHSSDDIQMPLV 456
Query: 226 RLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL---------------- 269
+ + LR + L+ + +G Y TL+ R+ TLL AL+
Sbjct: 457 TAGPSSYSLRAHASALLTHVVDTFGSSYPTLKPRVVATLLKALMTGVIPGNNNQDSASRR 516
Query: 270 -----DPKRALTQHYGAVQGLAALGPNVVRLLL 297
+P+ + GA+ L LG R+LL
Sbjct: 517 EAAVREPRASPGTKLGALMALRRLGKASFRMLL 549
>gi|401886199|gb|EJT50256.1| hypothetical protein A1Q1_00483 [Trichosporon asahii var. asahii
CBS 2479]
Length = 783
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 163/352 (46%), Gaps = 47/352 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI----GYR----DLFYLDDK 52
M H +RTTL +DV+ A++ +VEPV P A+ G + L++ D
Sbjct: 355 MVHGKRTTLLPEDVEHAMEALSVEPVIVPPRPLPQAPFHAVPVPGGSQGPAGQLYHEIDD 414
Query: 53 DVEFKDVIEAPLPRAPLDTSIV---CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD 109
+++F ++ PLP A +++ V HWLA+EGVQP IPEN A + P+ Q
Sbjct: 415 EIDFATYLKEPLPPALANSAGVKWKAHWLAVEGVQPAIPENPAPTARSGPT----RPQPT 470
Query: 110 GLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSV--------------LFKQ------ 149
++ K L+ ELQLYF ++T V + ++ F +
Sbjct: 471 TGSAALRQNAKTHLTTELQLYFSRLTAALVPSTAALAQLPGNPAPGSTAHAFPEAEWHRL 530
Query: 150 -ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS-LLFALMRVVWNLLQNPHIQIEPY- 206
AL S+ +D+ + ++ Y +V++ +++ L + + L+ VV +L N + +EPY
Sbjct: 531 AALASVRSDAAVAGVLAYPIRWVSESITKCLMGATGTIGCLIDVVEAILDNDVLFVEPYF 590
Query: 207 LHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLN 266
L L+ ++T + + ++LR + ++A + +Y Y L RL TL
Sbjct: 591 LGPLLSILLTVPLGPHPVTGPGPSPFDLRSRASDVLAKLVSQYAATYPGLIPRLLSTLTK 650
Query: 267 ALLDP---------KRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE 309
AL P ++ GAV G++ALGP VR L G L++++
Sbjct: 651 ALQAPPFPSPLGADHPPAGRYEGAVLGISALGPQSVRSTLWGKRGEGLAVID 702
>gi|443896812|dbj|GAC74155.1| hypothetical protein PANT_10d00039 [Pseudozyma antarctica T-34]
Length = 753
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 95/180 (52%), Gaps = 44/180 (24%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGF---ASG------------GPLRFRRAIGYRD 45
MRHS+R L T D+D AL+ RN+EP+YGF +SG GP+ FRR
Sbjct: 159 MRHSKRDQLKTADIDAALRARNIEPIYGFLPSSSGRTGGGNPSGYTAGPI-FRRVQTSSG 217
Query: 46 --LFYLDDKDVEFKDVIEAPLPRAPLDTSI--VCHWLAIEGVQPVIPENAPVQAIAAPSN 101
L Y++D++++F ++EA P+ + + HWLAIEGVQP +P+N AIA +
Sbjct: 218 VPLHYIEDEEIDFDKILEAG-PKIGIGRGVGWGAHWLAIEGVQPAVPQNPSPIAIAE-AK 275
Query: 102 GTNN---------------------EQKDGLPVEIKLPVKHILSRELQLYFDKITELAVS 140
GT+ DG V L VKHILSRELQLY++++T+ +S
Sbjct: 276 GTSGFMGPTSTLPSASVPAAKAVTVAGGDGQAVAKPL-VKHILSRELQLYYERLTKSIIS 334
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 47/167 (28%)
Query: 150 ALVSLATDSGLHPLVPYFTYFVADEV--------------------------SRGLN--N 181
AL SL D GLH LVPY FV +V +R ++ +
Sbjct: 404 ALASLRGDPGLHQLVPYLIRFVGSKVIDILRAPADEAEGGADADGAPAAVRETRQISTAD 463
Query: 182 YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN-------RLAD----- 229
+L L+ + +L NPHI IEPYLHQ+MPS+++ L+ L R AD
Sbjct: 464 NHMLSVLLSTIHAILVNPHIFIEPYLHQMMPSILSILLTSSLAEPELLAQMRNADADVQT 523
Query: 230 -------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 269
+ + LR + L+ + +G Y TL+ R+ TLL AL+
Sbjct: 524 PLITAGPSSYSLRAHASALLTHVVDTFGASYPTLKPRVVATLLKALM 570
>gi|71019437|ref|XP_759949.1| hypothetical protein UM03802.1 [Ustilago maydis 521]
gi|46099495|gb|EAK84728.1| hypothetical protein UM03802.1 [Ustilago maydis 521]
Length = 701
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 93/178 (52%), Gaps = 40/178 (22%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGF--------ASGGPLRFRRAIGYRD------- 45
MRHS+R L T D+D AL+ RN+EP+YGF ++ P R+ +R
Sbjct: 97 MRHSKRDQLKTIDIDAALRARNIEPIYGFLPSSSGRSSASDPSRYTAGPTFRRVQTASGV 156
Query: 46 -LFYLDDKDVEFKDVIEAPLPRAPLDTSI--VCHWLAIEGVQPVIPENAPVQAIAAPSN- 101
L Y++D++++F ++EA PR + + HWLAIEGVQP +P+N AIA
Sbjct: 157 PLHYVEDEEIDFDKILEAG-PRIGIGRGVGWGAHWLAIEGVQPAVPQNPSPIAIAEAKGV 215
Query: 102 ----GTNNEQK---------------DGLPVEIKLPVKHILSRELQLYFDKITELAVS 140
G ++ Q DG + L VKHILSRELQLY++++T+ VS
Sbjct: 216 SGFMGPSSTQPTTAAPAAKAVTVAGGDGQAIAKPL-VKHILSRELQLYYERLTKSIVS 272
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 73/167 (43%), Gaps = 47/167 (28%)
Query: 150 ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS-------------------------- 183
AL SL D GLH LVPY FV +V L + S
Sbjct: 342 ALASLRGDPGLHQLVPYLIQFVGSKVIETLRSPSQDDTAAASDGSSAAMAVRESQQISTA 401
Query: 184 ---LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK--------RLGNRLADNH- 231
+L L+ V +L NPHI +EPYLHQ+MPS+++ L+ RL + D H
Sbjct: 402 DNHMLGVLLSTVHAILVNPHIFVEPYLHQMMPSILSILLTSSLAEPELLRLSQGMNDGHR 461
Query: 232 ---------WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 269
+ LR + L+ + + +G Y TL+ R+ TLL AL+
Sbjct: 462 PLVTAGPSSYSLRAHASALLTHVVETFGSSYPTLKPRVVATLLKALM 508
>gi|58267138|ref|XP_570725.1| hypothetical protein CNE00290 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134111533|ref|XP_775302.1| hypothetical protein CNBE0210 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257961|gb|EAL20655.1| hypothetical protein CNBE0210 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226959|gb|AAW43418.1| hypothetical protein CNE00290 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 520
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 140/302 (46%), Gaps = 32/302 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVY------GFASGGPLRFRRAIGY---RDLFYLDD 51
M H++R+TL +DV+ AL+ NVEP+ S PL + ++ D
Sbjct: 54 MVHAKRSTLMPEDVEHALEALNVEPILIPPRPLALPSFHPLNLPPPAANMPPQTIYTTTD 113
Query: 52 KDVEFKDVIEAPLPRAPLDTSIV---CHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQK 108
+++F ++ PLP ++ V HWLA+EGVQP +PEN +I A + G K
Sbjct: 114 DEIDFASYLKEPLPAGIASSAGVKWKAHWLAVEGVQPAVPENPAPSSIHAGAGGGAQRVK 173
Query: 109 DGLP----VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ-------ALVSLATD 157
G P +K + L +ELQLYF ++T V + ++ + AL SL D
Sbjct: 174 -GAPAPASTTLKPSARAHLPQELQLYFTRLTTALVPPTATLPESEPERHRLAALASLRND 232
Query: 158 SGLHPLVPYFTYFVADEVSRGLNNYSLLFA-LMRVVWNLLQNPHIQIEPYLHQLMPSVVT 216
+ ++ Y ++ + + + L + L+ V LL N + IEPY+HQL+P +++
Sbjct: 233 VAVAGMLVYVVKWLCESIQKCLMAPTASIGHLVDAVGALLANEGLFIEPYMHQLLPPLLS 292
Query: 217 CLVAKRLG-------NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 269
++ LG + + E+R + +++ I Y Y L RL TL AL
Sbjct: 293 IILTVPLGPHPPQPASSSQPSPTEIRSRASDVLSKIASTYSPSYPGLIPRLVSTLTKALH 352
Query: 270 DP 271
P
Sbjct: 353 SP 354
>gi|195451123|ref|XP_002072777.1| GK13782 [Drosophila willistoni]
gi|194168862|gb|EDW83763.1| GK13782 [Drosophila willistoni]
Length = 469
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 6/197 (3%)
Query: 118 PVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSR 177
P K ILSRE + IT ++ +S++ ++AL +L D L+ L+P F+++ V+
Sbjct: 55 PRKRILSREQLGLYKLITAASLGKSENKR-RRALQTLTNDPALNDLLPALCLFISNAVNV 113
Query: 178 GLN--NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELR 235
+ N S L LMR+V L+ N + ++ LHQL+P+V+TCL+ R + +HW LR
Sbjct: 114 NVVKLNMSKLLYLMRMVRALVANSSLCLQRCLHQLIPAVLTCLLT-RQDDPFPADHWALR 172
Query: 236 DFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRL 295
+++ ++A I + + N + R+ AL K LT YGAV GL LG VVR
Sbjct: 173 EYSGNIIAEIVWHFDNPSNGILPRVIGIYNQAL--QKLPLTTVYGAVIGLGKLGNYVVRA 230
Query: 296 LLLPNLGPYLSLLEPEM 312
L+P + S +EP +
Sbjct: 231 YLVPQIAFISSRIEPHL 247
>gi|321258761|ref|XP_003194101.1| hypothetical protein CGB_E0240C [Cryptococcus gattii WM276]
gi|317460572|gb|ADV22314.1| Hypothetical protein CGB_E0240C [Cryptococcus gattii WM276]
Length = 522
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 141/303 (46%), Gaps = 32/303 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVY------GFASGGPLRF---RRAIGYRDLFYLDD 51
M H++R+TL +DV+ AL+ NVEP+ S PL + + ++ D
Sbjct: 54 MVHAKRSTLMPEDVEHALEALNVEPILIPPRPLALPSFHPLNLPPPAANMPSQTIYTTPD 113
Query: 52 KDVEFKDVIEAPLPRAPLDTSIV---CHWLAIEGVQPVIPEN-APVQAIAAPSNGTNNEQ 107
+++F ++ PLP ++ V HWLA+EGVQP +PEN AP G++ ++
Sbjct: 114 DEIDFVSYLKEPLPAGIASSAGVKWKAHWLAVEGVQPAVPENPAPSSIHPGAGAGSSGQR 173
Query: 108 KDGLP----VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ-------ALVSLAT 156
G P +K + L +ELQLYF ++T V + ++ + AL SL
Sbjct: 174 VKGAPAPASTTLKPSARAHLPQELQLYFTRLTTALVPPATTLPESEPERHRLAALASLRN 233
Query: 157 DSGLHPLVPYFTYFVADEVSRGLNNYSLLFA-LMRVVWNLLQNPHIQIEPYLHQLMPSVV 215
D + ++ Y ++ + + + L + L+ V LL N + IEPY+HQL+P ++
Sbjct: 234 DVAVAGMLVYVVKWLCESIQKCLMAPTASIGHLVDAVGALLANEGLFIEPYMHQLLPPLL 293
Query: 216 TCLVAKRLGNRLAD-------NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
+ ++ LG + E+R + +++ I Y Y L RL TL AL
Sbjct: 294 SIILTVPLGPHPPQPASLSQPSPTEIRSRASDVLSKIASTYSPSYPGLIPRLVMTLTRAL 353
Query: 269 LDP 271
P
Sbjct: 354 HSP 356
>gi|54306296|gb|AAV33343.1| TAF6-like protein [Drosophila melanogaster]
Length = 593
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 126/234 (53%), Gaps = 19/234 (8%)
Query: 81 EGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE---IKLPVKHILSRELQLYFDKITEL 137
E VQ +PE P ++ P T L VE +K ++ LS E Q +F+ +TE
Sbjct: 146 ESVQESVPEPVPETSLEPPPMHTG-----WLKVEQVLLKPSKRYPLSMEQQNFFELVTEA 200
Query: 138 AVS--RSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVW 193
V S VL AL +++TD L L+P T F+AD V+ + N LL LMR+V
Sbjct: 201 CVGDLESRRVL---ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLYLMRMVR 257
Query: 194 NLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTAKLVAAICKRYGHV 252
LL N + YLH L+P+V++CL+AK++ + +++HW LR+++ ++A I +++
Sbjct: 258 ALLGNQRFSLLQYLHLLLPAVLSCLLAKQVCASPNSEDHWALREYSGNIMAHIVRQFDAA 317
Query: 253 YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLS 306
N + R+ ALL K+ LT +GAV GL +G + V +LP L YLS
Sbjct: 318 DNGILPRVIGVYNKALL--KKPLTTVFGAVIGLGKMGNHAVLACILPQLK-YLS 368
>gi|195501972|ref|XP_002098025.1| GE24166 [Drosophila yakuba]
gi|194184126|gb|EDW97737.1| GE24166 [Drosophila yakuba]
Length = 557
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 113/190 (59%), Gaps = 7/190 (3%)
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
++ L++E Q +F+ +TE V SDS ++AL +L TD + L+P T F+AD V+ +
Sbjct: 153 RYPLTKEQQSFFELVTEACVGTSDS-RRQRALQTLTTDPSIEVLLPTLTMFIADAVAINV 211
Query: 180 --NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRD 236
+ ++LF LMR++ +LL N + YLH L+P+V++C++AK++ + +D+HW LR+
Sbjct: 212 KQQDMAMLFYLMRMIRSLLGNHRFSLLQYLHLLLPAVLSCVLAKQVCASPDSDDHWALRE 271
Query: 237 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 296
++ ++ I +++ ++ R+ ALL + LT +GAV GL LG VR
Sbjct: 272 YSGNIMGHIGRQFDAADTSILPRVIGVYKKALL--MKPLTTVFGAVIGLGKLGNRAVRAC 329
Query: 297 LLPNLGPYLS 306
++P L YLS
Sbjct: 330 IVPQL-KYLS 338
>gi|341877986|gb|EGT33921.1| hypothetical protein CAEBREN_26402 [Caenorhabditis brenneri]
Length = 829
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 140/312 (44%), Gaps = 59/312 (18%)
Query: 45 DLFYLDDKDVEFKDVIEAP----LPRAPLDTSIVC--HWLAIEGVQPVIPENAPVQAIAA 98
D Y K V+ K++I+A + SI+ HWL +EG+QP +PEN +
Sbjct: 181 DRMYWGRKSVKRKNIIDATSQDIVSNERFCDSIMIKDHWLVVEGIQPCVPENVIPSEVKQ 240
Query: 99 PSNGTNNEQKD----GLPVEIKLPV------KHILSRELQLYFDKITELAVSRSDSVLFK 148
E + G+P +LP+ + S E Q+ + ++T S S L +
Sbjct: 241 KFQEQQEETQRVYGYGVPGLQRLPMPDKRTSTQMYSVEHQVLYAEVTRTLTS--GSALER 298
Query: 149 QALVS-LATDSGLHPLVPYFTYFVADEVSR--GLNNYSLLFALMRVVWNLLQNPHIQIEP 205
Q ++ L +D+G+ L F +A+ V G N L L+++ W+L++NPHI++E
Sbjct: 299 QKVLEVLESDTGIQFLAGRFVILIAEGVRLHIGTRNTRGLANLLKLTWSLMKNPHIRLEK 358
Query: 206 YLHQLMPSVVTCLVAKRL-----GNRLA-------------------------------D 229
YL+ L+PS+++C+V+K L +R+A +
Sbjct: 359 YLYVLVPSLISCVVSKSLVPLVDSSRIASKSTSTTKSTAPVVGTPELTEEDRERIIRDME 418
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALG 289
+++R+ + KL+A + ++Y + L R+ +TL L R YG + A G
Sbjct: 419 FEFKIRESSGKLLAELSQQYEN--QNLSVRIIQTLRKVLTGSSRDPAAVYGVLCTFFAFG 476
Query: 290 PNVVRLLLLPNL 301
+ ++LP L
Sbjct: 477 NLTITTVVLPKL 488
>gi|341880452|gb|EGT36387.1| hypothetical protein CAEBREN_01937 [Caenorhabditis brenneri]
Length = 829
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 140/312 (44%), Gaps = 59/312 (18%)
Query: 45 DLFYLDDKDVEFKDVIEAP----LPRAPLDTSIVC--HWLAIEGVQPVIPENAPVQAIAA 98
D Y K V+ K++I+A + SI+ HWL +EG+QP +PEN +
Sbjct: 181 DRMYWGRKSVKRKNIIDATSQDIVSNERFCDSIMIKDHWLVVEGIQPCVPENVIPSEVKQ 240
Query: 99 PSNGTNNEQKD----GLPVEIKLPV------KHILSRELQLYFDKITELAVSRSDSVLFK 148
E + G+P +LP+ + S E Q+ + ++T S S L +
Sbjct: 241 KFQEQQEETQRVYGYGVPGLQRLPMPDKRTSTQMYSVEHQVLYAEVTRTLTS--GSALER 298
Query: 149 QALVS-LATDSGLHPLVPYFTYFVADEVSR--GLNNYSLLFALMRVVWNLLQNPHIQIEP 205
Q ++ L +D+G+ L F +A+ V G N L L+++ W+L++NPHI++E
Sbjct: 299 QKVLEVLESDTGIQFLAGRFVILIAEGVRLHIGTRNIRGLANLLKLTWSLMKNPHIRLEK 358
Query: 206 YLHQLMPSVVTCLVAKRL-----GNRLA-------------------------------D 229
YL+ L+PS+++C+V+K L +R+A +
Sbjct: 359 YLYVLVPSLISCVVSKSLVPLVDSSRIASKSTSTTKSTAPVVGTPELTEEDRERIIRDME 418
Query: 230 NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALG 289
+++R+ + KL+A + ++Y + L R+ +TL L R YG + A G
Sbjct: 419 FEFKVRESSGKLLAELSQQYEN--QNLSVRIIQTLRKVLTGSSRDPAAVYGVLCTFFAFG 476
Query: 290 PNVVRLLLLPNL 301
+ ++LP L
Sbjct: 477 NLTITTVVLPKL 488
>gi|395544394|ref|XP_003774095.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L isoform 1
[Sarcophilus harrisii]
Length = 276
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 125/248 (50%), Gaps = 31/248 (12%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV- 59
M+H++R LT +D + AL+ NVE V G+ S L R A DL++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSNVEAVCGYGSQETLPLRPA-REGDLYFPEDREVNLVELA 113
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
+ +P+ +T++ H ++G V P+ + A+++
Sbjct: 114 LATNIPKGCPETAVRVHVSYLDGKGNVEPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K AL L T+S + L+PYF Y V+ V
Sbjct: 153 ---LTDDLLKYYQQVTR-AVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSG-VKSVS 207
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +LL+NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 208 HDLEQLHRLLQVARSLLRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 266
Query: 238 TAKLVAAI 245
A L++ I
Sbjct: 267 AALLLSHI 274
>gi|123432184|ref|XP_001308370.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890047|gb|EAX95440.1| hypothetical protein TVAG_243280 [Trichomonas vaginalis G3]
Length = 438
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 148/349 (42%), Gaps = 18/349 (5%)
Query: 4 SRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAP 63
+RT LT D++ AL+ +EP++G++S G L DD + +
Sbjct: 52 CKRTKLTVADINVALESLRLEPLFGYSSQQEPNVVDVNGDNKLLVYDDSFAQLEQYARRE 111
Query: 64 LPRAPLDTSIVCHWLAIEGVQPVIPENAPV--QAIAAPSNGTNNEQKDGLPVEIKLPVKH 121
LP PL T W+A+ G+ E + + + N +N+Q+ V +
Sbjct: 112 LPAYPLATHFDVVWIALNGIGHENLETMELSNEKLENTLNKQHNQQRQKTQDSDYFVVSN 171
Query: 122 ILSRELQLYFDKITELAVSRSDSVLFKQALV-------SLATDSGLHPLVPYFTYFVADE 174
I F + + S S L +V L+ + LVPY+ F +
Sbjct: 172 IHQ------FSYVNQKFFGASGSFLMSSKIVDRELMFSKLSVLDCIQTLVPYYIRFSLVQ 225
Query: 175 VSRGLNNYSLLFALMRVVWNLLQNPHIQ-IEPYLHQLMPSVVTCLVAKRLGNRLADNHWE 233
N++ L++ + V L+QNP ++ I Y+ + ++ L+ + A
Sbjct: 226 FKDHPNDWDTLYSSLCTVRALVQNPKLEYINCYIQSFITIALSFLLNPEILRTNAIALVR 285
Query: 234 LRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVV 293
+R+ A+ + IC + + Y +Q +T L++ L++ ++++ +GA GL A GP +
Sbjct: 286 MRELAAEFLLVICDKLSNTYPMVQPHITAQLISVLIEHDYSVSEKFGAFCGLNAFGPQTI 345
Query: 294 RLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHEAWRVYGALLQAAGQCIY 342
+LP++ + L + + +N R A Y L+ A G C+Y
Sbjct: 346 AKFVLPHIEMIIKDLVSGPMKDGDRN--VRMIAASFYDTLVNAVGLCLY 392
>gi|355752016|gb|EHH56136.1| PCAF-associated factor 65-alpha [Macaca fascicularis]
Length = 412
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 100/191 (52%), Gaps = 10/191 (5%)
Query: 150 ALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYL 207
AL L T+S + L+PYF Y V+ VS L L L++V +L +NPH+ + PY+
Sbjct: 51 ALQDLQTNSKIGALLPYFVYVVSGVKSVSHDLEQ---LHRLLQVARSLFRNPHLCLGPYV 107
Query: 208 HQLMPSVVTCLVAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLL 265
L+ SV+ C++ N L D HW LRD A L++ I +G + + L + +L
Sbjct: 108 RCLVGSVLYCVLEPLAASINPLND-HWTLRDGAALLLSHIT--HGDLVSGLYQHILLSLQ 164
Query: 266 NALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHE 325
L DP R L HYGAV GL ALG V +L P+L Y + L+ + N + +
Sbjct: 165 KILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKAD 224
Query: 326 AWRVYGALLQA 336
+VYGA+L A
Sbjct: 225 GHKVYGAILVA 235
>gi|194898771|ref|XP_001978941.1| GG10968 [Drosophila erecta]
gi|190650644|gb|EDV47899.1| GG10968 [Drosophila erecta]
Length = 570
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 126/234 (53%), Gaps = 20/234 (8%)
Query: 123 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--N 180
L++E Q +F+ +TE + S+S ++AL +L+TD L L+P F+AD V+ +
Sbjct: 156 LTKEQQSFFELVTEACMGISES-RRQRALQTLSTDPSLEVLLPRLITFIADAVAINVTQQ 214
Query: 181 NYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL-GNRLADNHWELRDFTA 239
N SLL LMR+V +L N + YLH L+P+V++CL+AK++ + ++HW LR+++
Sbjct: 215 NLSLLLYLMRMVRAVLGNHRFSLLQYLHLLLPAVLSCLLAKQVCASPDVEDHWALREYSG 274
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLL-----NALLDPKRALTQHYGAVQGLAALGPNVVR 294
++A I +++ N++ R+ +L ALL + LT +GAV GL +G VR
Sbjct: 275 NIMAHIGRQFNAADNSILPRVIGQVLILVYKKALL--MKPLTTVFGAVIGLGKMGNYAVR 332
Query: 295 LLLLPNLGPYLSLLEPEM---------LLEKQKNEVKRHEAWRVYGALLQAAGQ 339
++P L ++P M L+KQ + RH ++ +L + Q
Sbjct: 333 ACIVPQLKYLSEHIQPHMTASNGSSSSSLDKQAAKYIRHRVVKMCTPVLMSLHQ 386
>gi|402223220|gb|EJU03285.1| TAF-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 487
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 163/314 (51%), Gaps = 26/314 (8%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRR-----AIGYRDLFYLDDKDVE 55
M+H++RT LTT D+D AL+ N+EP+YG + PL FRR + ++ ++D++V+
Sbjct: 74 MKHAKRTVLTTADIDLALRNLNIEPLYGHSPSVPLSFRRFQPNHSEAKSFVYAVEDEEVD 133
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD--GLPV 113
+ V+ + P + + HWLA+EGVQP+ P T++ Q D P
Sbjct: 134 LERVVRERRVKVPREVGVKPHWLAVEGVQPL-------IPENPPPPPTSHTQTDRPSSPS 186
Query: 114 EIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD 173
+ L LQLY ++ +S D AL SLA D+GL LVP +V +
Sbjct: 187 SPPSSLPSSLPLPLQLYHTRLLSALLS-PDDARRAAALASLAADAGLQLLVPNLVNWVGE 245
Query: 174 EVSRGL-----NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLA 228
V+R L + ++L + ++ ++ +N +I +EPYLHQ++P +++ L+
Sbjct: 246 RVTRELARAEEGDPAVLQVALGMIGSMAKNENIFLEPYLHQILPPLLSLLLVH------P 299
Query: 229 DNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAAL 288
LR A + + Y Y TL +RL KTLL ALL+P+RAL GAV+GLAAL
Sbjct: 300 HPAPSLRPVAASTLHQLITLYSPKYTTLASRLLKTLLRALLEPERALPTRAGAVRGLAAL 359
Query: 289 GPNVVRLLLLPNLG 302
G VR L+ + G
Sbjct: 360 GVEGVRRGLVESRG 373
>gi|196006796|ref|XP_002113264.1| hypothetical protein TRIADDRAFT_57235 [Trichoplax adhaerens]
gi|190583668|gb|EDV23738.1| hypothetical protein TRIADDRAFT_57235 [Trichoplax adhaerens]
Length = 450
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 138/292 (47%), Gaps = 42/292 (14%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRD--LFYLDDKDVEFKD 58
M HS+RT + TDDV++A KL +E +YG +F + + ++D ++YLDDK+V +
Sbjct: 75 MIHSKRTRMMTDDVNKAAKLCRLESIYGINGTEADQF-KCVTFKDSKIYYLDDKEVNLHN 133
Query: 59 VI-EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKL 117
+I +P P TS+ HWL I G + +N+ +N T +K
Sbjct: 134 LIMNDEIPNDPGRTSVRAHWLPISG---SLKQNSINWQQLNTANNT----------YLKA 180
Query: 118 PVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSR 177
++ + S+E QL + +L T+S + ++PY Y++ +
Sbjct: 181 VLQGLKSQEPQLVLTIMN-----------------NLRTNSHVTVILPYVLYYLISSIK- 222
Query: 178 GLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDF 237
+++ + ++ + ++++N + + PYL QL+ ++TC + +R+A N W LR+
Sbjct: 223 ---SHTHVARCLQSIQSIIENKSLTLLPYLVQLVSVLMTCTLD---DHRMA-NSWHLRNK 275
Query: 238 TAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALG 289
+A L+A + + Y + +T L L + HYGA+ L G
Sbjct: 276 SAMLLALLAREYKKSSPNVCNNITNKLREVLASNDKPRFSHYGAIVTLTYFG 327
>gi|238598036|ref|XP_002394498.1| hypothetical protein MPER_05606 [Moniliophthora perniciosa FA553]
gi|215463610|gb|EEB95428.1| hypothetical protein MPER_05606 [Moniliophthora perniciosa FA553]
Length = 233
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 69/118 (58%), Gaps = 12/118 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY--------RDLFYLDDK 52
MRH RTTLTT D+D+AL++ N+EP+YG + P FRRA+ + +++++D+
Sbjct: 37 MRHGCRTTLTTADIDQALRVLNIEPLYGHSPYAPPTFRRALPFVSGGLAPAGSVYFVEDE 96
Query: 53 DVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDG 110
+++F V+ P S HWLA+EGVQP+IPEN P A P G E + G
Sbjct: 97 EIDFDRVLREEKITLPKGVSWTAHWLAVEGVQPLIPENPP----AIPREGDVPETEFG 150
>gi|196004762|ref|XP_002112248.1| hypothetical protein TRIADDRAFT_23396 [Trichoplax adhaerens]
gi|190586147|gb|EDV26215.1| hypothetical protein TRIADDRAFT_23396 [Trichoplax adhaerens]
Length = 154
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDV 59
MRHSRR+ LT DD+D ALKLRN EP+YGF S + FR A G R L + D+++ +
Sbjct: 52 MRHSRRSKLTPDDIDLALKLRNREPLYGFTSRDFVPFRYASGQGRRLHFQPDEELNLTEF 111
Query: 60 IEA-PLPRAPLDTSIVCHWLAIEGVQPVIPEN 90
+E+ +P+ P+D+ + HWL++EG QP+I EN
Sbjct: 112 LESLQVPQVPIDSYVRSHWLSVEGTQPLIQEN 143
>gi|323309179|gb|EGA62406.1| Taf6p [Saccharomyces cerevisiae FostersO]
Length = 209
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 6/95 (6%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLR----FRR--AIGYRDLFYLDDKDVE 55
RHS+R LTTDDV +AL++ NVEP+YG+ G + F + G + ++YLD+++V+
Sbjct: 57 RHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVD 116
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN 90
F +I PLP+ P + HWLA+EGVQP I +N
Sbjct: 117 FDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQN 151
>gi|46310076|gb|AAS87319.1| CG9348-like protein [Drosophila miranda]
Length = 163
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 3 HSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIE 61
H++R + D+D +LKLRNVEP YGF S + FR A G R+L + +DK+++ ++
Sbjct: 53 HAKRQKILISDIDMSLKLRNVEPQYGFVSKDNIPFRFATGGGRELHFTEDKEIDLSEITA 112
Query: 62 APLPRAPLDTSIVCHWLAIEGVQPVIPENAP 92
+ PLDT++ HW +EG+QP +PEN P
Sbjct: 113 NNAVKIPLDTTLRSHWFVVEGIQPTVPENPP 143
>gi|223996869|ref|XP_002288108.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977224|gb|EED95551.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 505
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 118/284 (41%), Gaps = 29/284 (10%)
Query: 64 LPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLP----------- 112
LP P + + HWLA++GV P++ N +D P
Sbjct: 140 LPPPPTELGMTLHWLAVDGVMPLLRMNDVWNGFGVEGGRKELYSRDVAPLVQLDENDNNN 199
Query: 113 ------VEIKLPVKHILSRELQLYFDKITE-LAVSRSDSVLFKQALVSLATDSGLHPLVP 165
+ I+ +LS ELQLYF KIT L+ S + L + TD G+ LVP
Sbjct: 200 NNPDSSIRIRELQHRLLSEELQLYFSKITTVLSNPNSPPMEVSSILNGIRTDGGIQELVP 259
Query: 166 YFTYFVADEVSRGLNNYSLLFALMRVVWNL----LQNPHIQIEPYLHQLMPSVVTCLVAK 221
+ + FVA + + R + L L N + ++ +LHQL + TC+VAK
Sbjct: 260 FLSRFVASGLMEKKKGGGGGIGMARRLVGLFDAMLDNASLHLDLHLHQLFTPIGTCIVAK 319
Query: 222 RLGN----RLAD-NHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALT 276
+L + + D H+ LR A + C Y Y T++ R+ K L L R L
Sbjct: 320 KLSSTSTIQYYDPTHYSLRYEAAASLVKACTIYSSQYTTMKPRIIKLLTQQALRIDRPLV 379
Query: 277 QHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNE 320
YG + GL+ G V +LP Y E E LE+ NE
Sbjct: 380 TQYGGIVGLSLFGARAVDAFVLPVARGYWEWWEAE--LERCVNE 421
>gi|147812197|emb|CAN72683.1| hypothetical protein VITISV_036813 [Vitis vinifera]
Length = 102
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
Query: 394 VDAVSTSSMPTPMEEDATAATPLDNSDAD-HPSPSSVQIPPDSGSESRSKRDKGDSQAQK 452
+D V T+ + + M+ T P+ ++D D PS SS QIP + SE R ++ GD++A K
Sbjct: 1 MDPVPTNFLSSNMQPPETKG-PVPSTDPDMGPSSSSRQIPHGNISEIRDRKGXGDNRAMK 59
Query: 453 LSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMSLFL 495
+SA+L Q W+DDL SG L VSL ELFGE IL F+PA EMSL L
Sbjct: 60 MSAVLTQTWRDDLKSGHLPVSLSELFGESILPFVPASEMSLLL 102
>gi|17543084|ref|NP_500397.1| Protein TAF-6.2 [Caenorhabditis elegans]
gi|351060543|emb|CCD68234.1| Protein TAF-6.2 [Caenorhabditis elegans]
Length = 814
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 130/273 (47%), Gaps = 51/273 (18%)
Query: 76 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD----GLPVEIKLPV------KHILSR 125
HWL ++G+QP +PEN + +E + G+P + P+ S
Sbjct: 212 HWLVVDGIQPCLPENVIPSEVKRRFQEQQHETQRAHGFGVPGIKREPMPEKRMSTQTFSM 271
Query: 126 ELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD--EVSRGLNNYS 183
E Q+ + +IT++ S S S+ ++ L ++ TD+G+ L F +A+ + G N
Sbjct: 272 EHQVLYSEITKILTSGS-SLQRQKVLETIETDTGIQFLAGRFVILIAEGTRLHIGTRNIR 330
Query: 184 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK---------RLGNR-------- 226
L L+++ W+L++NP+I++E YL+ L+PS+++C+V+K R+G +
Sbjct: 331 GLANLLKLTWSLMKNPNIRLEKYLYVLVPSLISCVVSKNMVPILDVSRVGLKAKPTTVTP 390
Query: 227 --------LADN----------HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
AD+ ++LR+ + KL+A + +Y ++ L R+ +T L +
Sbjct: 391 LGATPPELTADDRERIIRDLEFEFKLREASGKLLAELSSQYQNL--NLNVRIIQT-LRGV 447
Query: 269 LDPKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
L + YG + L A G + ++LP +
Sbjct: 448 LSGNQDPAAIYGVLCTLFAFGNLTINSVVLPKM 480
>gi|123435741|ref|XP_001309034.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890742|gb|EAX96104.1| hypothetical protein TVAG_014960 [Trichomonas vaginalis G3]
Length = 393
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 154/362 (42%), Gaps = 56/362 (15%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY--------RDLFYLDDKD 53
R S LT ++V++AL N P+ G+ R R+ I Y ++++ +DK
Sbjct: 23 RQSHSKKLTVENVNDALVAYNYNPILGY------RNRKGIKYVSVGLVDGQEVYIPEDKQ 76
Query: 54 VEFKDVIEAPLPRAPLDTSIVCHWLA-IEGVQPVIPENAPVQ---AIAAPSNGTNNEQKD 109
++ I PLP P++ HW A ++GVQP IPEN Q + +AP ++
Sbjct: 77 IDLNTFINKPLPPTPIEKFFSFHWQACLKGVQPQIPENIAEQTRDSYSAPITVGQLQKAK 136
Query: 110 GLPVEIKLPVKHILSRE-------LQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHP 162
+ HI+S Y + + S VL K ++ DS + P
Sbjct: 137 MTDQSV-----HIISSRNDVDTDLYNTYMNIFNKSPSSPEVDVLCK----NMEKDSAISP 187
Query: 163 LVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKR 222
++PY + E+S + L +++ L+QN I IE YL L+ +T +
Sbjct: 188 ILPY----IMHELSSDYTQHQDLILRIKIAEALIQNNFIPIENYLISLINLAITGI---- 239
Query: 223 LGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDP-KRALTQHYGA 281
N + ++D AK + + ++ + TL+ RL LD + + + G+
Sbjct: 240 --NETSCEFIPIKDLAAKFLDNLIIKFTPQFPTLRQRLADHFSTIFLDKIQLNIGRKVGS 297
Query: 282 VQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHE---AWRVYGALLQAAG 338
L+ +G +V+ ++LP + PE+L + +E ++ LL+ +G
Sbjct: 298 AIALSYIGQEIVKDVILPKI--------PELLARIYQRRTVANELADISKLKSILLKLSG 349
Query: 339 QC 340
+C
Sbjct: 350 EC 351
>gi|118377997|ref|XP_001022175.1| TATA box binding protein associated factor [Tetrahymena
thermophila]
gi|89303942|gb|EAS01930.1| TATA box binding protein associated factor [Tetrahymena thermophila
SB210]
Length = 522
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 148/329 (44%), Gaps = 32/329 (9%)
Query: 1 MRHSRRTTLTTDDVDEALKLRN-VEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV 59
M+H +R LTT DV+ ALK RN + ++G+ + F++ Y + D++ + +
Sbjct: 49 MKHFKRDKLTTSDVEYALKDRNYYDKIFGYDVSEKVSFKKHANY---WIKQDEERDLQSY 105
Query: 60 IEA---PLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQ---AIAAPSNGTNNEQKDGLPV 113
+EA L R + ++ W++I+G P I EN ++ AI E +
Sbjct: 106 LEAQVKSLKRQVMQPTVTAWWMSIDGKIPPINENKFIKNKAAILKYDELKKEEYSKNFNI 165
Query: 114 EIKLPVKHILSRELQLYFDKITELAVSRSDSV----------------LFKQALVSLATD 157
IK + +LS E+ +F +IT++ + + K L +L T+
Sbjct: 166 -IKDKPRSLLSEEINKFFVEITKVIAETEEQIDNPKLNLPGAPFRETPKLKIILNNLKTN 224
Query: 158 SGLHPLVPY-FTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVT 216
SGL L+P+ Y D N S + ++++ +++ N I IE +LH ++ ++
Sbjct: 225 SGLTSLLPFLLNYLYQDYDLENKNGVSKKYITLKILHSIILNTGINIEFHLHIIIKILIH 284
Query: 217 CLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALT 276
+ A L + + R+ +A+ ++ + R+ Y TL+ + TLL L +
Sbjct: 285 FITASVLSTNKCVDEIQFREQSAQNLSYLINRFTFKYITLKQNICDTLLGILKETLNQKI 344
Query: 277 QHY----GAVQGLAALGPNVVRLLLLPNL 301
+Y G V + N++R L+LP +
Sbjct: 345 LNYQVLLGIVMTFSHFESNIIRQLILPTI 373
>gi|198433140|ref|XP_002128118.1| PREDICTED: similar to MGC80584 protein [Ciona intestinalis]
Length = 515
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 155/348 (44%), Gaps = 35/348 (10%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
+RH+RR L +DV+ AL + ++G S L F++ D+ D + +D I
Sbjct: 60 LRHARRKRLLANDVNRALYWSDTPAIHG--SSNTLDFKQVA---DVHVPIDPTINLRDEI 114
Query: 61 EAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPVK 120
+ P +S + V + P+Q + + ++EQ+ E++L
Sbjct: 115 -FDIELRPASSS------TLSSVDVSCDKEEPMQL--SEQSELDSEQE----TEVRLQPN 161
Query: 121 HILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFV--ADEVSRG 178
+ + Y+ + E ++ + V F + L L ++ + P VPYF F+ A VS
Sbjct: 162 ---TDQFTKYYSTLVESLLTDNKPV-FCEMLTDLRSNPRVAPCVPYFVTFLTKASLVSHD 217
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRD 236
L+ S + M+ +L NP++ + YL+ L+ S + C++ N L D HW LRD
Sbjct: 218 LDKLSWMLYTMKA---MLMNPNLSLVDYLNPLLSSAMYCVLEPLAASINPLND-HWLLRD 273
Query: 237 FTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLL 296
+ A+++ I +Y + + N L DP + L YGA+ + LG VR +
Sbjct: 274 YGARIITQIVHQYPQKTEEMLGSVKVATRNVLSDPTKPLCSQYGALAVIYYLGEEPVRTV 333
Query: 297 LLPNLGPYLSLLEPEMLLEKQKNEVKRH---EAWRVYGALLQAAGQCI 341
LLP L +++ M + ++ H +A +V GA+ +C
Sbjct: 334 LLPMLTKL--VVDHIMPITNDRSLTSAHMKEDAQKVLGAVCHCLRRCF 379
>gi|402590123|gb|EJW84054.1| hypothetical protein WUBG_05035, partial [Wuchereria bancrofti]
Length = 290
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 191 VVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRY 249
++ +L NP + +E LH+L+PSV++C+++++L R DNHW LR+F+++L+A IC+ Y
Sbjct: 1 MIQSLANNPALSLERCLHELLPSVLSCILSRQLCARPETDNHWALREFSSRLLANICRSY 60
Query: 250 GHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
N L++R+T+ L D L YG++ L LG + V +++P
Sbjct: 61 N--INHLRSRVTQVLAQVWRDESCTLAALYGSLYALNELGVDTVHSVVIP 108
>gi|268553091|ref|XP_002634528.1| C. briggsae CBR-TAF-6.2 protein [Caenorhabditis briggsae]
Length = 812
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 15/161 (9%)
Query: 76 HWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQ-----------KDGLPVEIKLPVKHILS 124
HWL ++GVQP +PEN + E K P E ++ S
Sbjct: 215 HWLVVDGVQPCVPENVIPSEVKRKFQEQQQETQRLYGYSVPGIKRDPPPEKRMST-QTFS 273
Query: 125 RELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSR--GLNNY 182
E Q+ + ++T++ ++ ++ ++ L ++ TD+GL L F +A+ V G N
Sbjct: 274 MEHQVLYIEVTKI-LTNGSALERQKVLETIETDTGLQFLAGRFVILIAEGVRLHIGTRNT 332
Query: 183 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 223
L LM++ W+L++NP+I++E YL+ L+PS+++C+V+K +
Sbjct: 333 RGLANLMKLTWSLMKNPNIRLEKYLYVLVPSLISCVVSKNM 373
>gi|268534188|ref|XP_002632224.1| C. briggsae CBR-TAF-6.1 protein [Caenorhabditis briggsae]
Length = 423
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 120/290 (41%), Gaps = 46/290 (15%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPL--------RFRRAIGYRDLFYLDDKD 53
RH R +T DV+ LK + A+ L + + G ++ D
Sbjct: 22 RHCSRHKMTVQDVENVLKYQQNMGSLKIATVDTLNMGINQMTQVQGTSGTSGIWTFQKMD 81
Query: 54 VEF-KDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPE--------------------NAP 92
V+ KD IE + P + ++ W G QPV E AP
Sbjct: 82 VDVEKDDIET-FVQIPRELRVI--WFMAPGRQPVQSEFTPNVDDEDGNYYEKNGPAVMAP 138
Query: 93 VQAIAAPSNGTNNE----------QKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRS 142
+Q P T++ K V +K P IL+ E Q++ I + + +
Sbjct: 139 IQEKVLPPTSTSSCLSMFRETVKCAKSDQKVGLKHPTLEILTVEQQIFMKDIITVCMGQD 198
Query: 143 DSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN--YSLLFALMRVVWNLLQNPH 200
D +AL +L TD+GL +P+ T + +S ++ SL+ RV+ +L N
Sbjct: 199 DKKR-HEALYTLETDAGLQVFLPHLTERICKSISCNISQRCLSLIIYAGRVLRSLSHNKA 257
Query: 201 IQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRY 249
+ LH ++PS+++C V + + R DNHW LRDF+AK + + + +
Sbjct: 258 CDMSVTLHHVLPSLLSCCVCRNMCLRPETDNHWALRDFSAKTLVGLVRDH 307
>gi|160331582|ref|XP_001712498.1| taf [Hemiselmis andersenii]
gi|159765946|gb|ABW98173.1| taf [Hemiselmis andersenii]
Length = 419
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 76/132 (57%), Gaps = 9/132 (6%)
Query: 189 MRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKR 248
+++++ L+ + +++P++HQ+ P ++ C++ KR D + L+ F+ K+V+ I R
Sbjct: 231 IKIIYALIWKNYHKMQPFIHQIFPILINCIIGKRFSGIKEDEQY-LKYFSVKIVSLIFFR 289
Query: 249 YGHVYNTLQTRLT----KTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPY 304
+G Y+ L++++T K LLN+L + K + G + GL + G V L ++P L
Sbjct: 290 FGSSYSGLKSKITFLFSKQLLNSLKNIKYLI----GPLMGLTSFGTKTVELYVMPFLSII 345
Query: 305 LSLLEPEMLLEK 316
L +E E+ ++K
Sbjct: 346 LEQIEKEIFIKK 357
>gi|355723129|gb|AES07792.1| TAF6 RNA polymerase II, TATA box binding protein -associated
factor, 80kDa [Mustela putorius furo]
Length = 93
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 24 EPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEG 82
EP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD + HWL+IEG
Sbjct: 1 EPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEG 60
Query: 83 VQPVIPENAP 92
QP IPEN P
Sbjct: 61 CQPAIPENPP 70
>gi|219116616|ref|XP_002179103.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409870|gb|EEC49801.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 498
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 175/399 (43%), Gaps = 47/399 (11%)
Query: 6 RTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKD---------VEF 56
R L D++ AL++R E +Y A P + D+ D V
Sbjct: 73 RRRLHAADINLALQMRQSEKLYATALVPPDTVHPS-SMSTTTTTDNPDHSLPASHRPVNL 131
Query: 57 KDVI-EAPLP-RAPLDTSIVCHWLAIEGVQPVIPENAPVQA-----------IAAP--SN 101
D + A LP + P + ++ WLA++G+ P + V A +A P +N
Sbjct: 132 ADFLRHAQLPFQQPAEVALHVSWLAVDGIAPEPHPHGVVGAWTDRHTPSPHPLAMPHENN 191
Query: 102 GTNNEQKDGLPVE--IKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQA------LVS 153
+N + P ++ +LS ELQLYF ++T + +++ A L
Sbjct: 192 NHHNPYQSTAPQAWLVQQLQAAMLSEELQLYFTRVTYALDNTTNTHSPTSARAQDRLLDR 251
Query: 154 LATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPS 213
LA D+ L LVP+F +V + ++ + A +R+V +L NP + +E YLH+L+P+
Sbjct: 252 LAVDAHLQELVPFFARYVTQTLY--ASHVTHQRAAVRLVQAMLHNPTLHLELYLHELVPA 309
Query: 214 VVTCLVA---KRLGNR-----LADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLL 265
++T +VA R R A HW LR + + +C+++G Y TLQ R+ +TL
Sbjct: 310 LLTAIVADHRDRTNQRTSVAVTATPHWRLRVEASVALRTVCRQFGPEYPTLQARVLRTLC 369
Query: 266 NALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEMLLEKQKNEVKRHE 325
A L P R+ +G + + GP ++ +LP L + E E + E + E
Sbjct: 370 QA-LGPDRSRPAVFGGLTAVTLFGPLAIQAFVLPMLPHAWNAWEEEA--QSSATEEVQWE 426
Query: 326 AWRVYGALLQAAGQCIYDRLKIFP-PLSSLPARSVWKTN 363
+ A L A G + P L++ PA V T+
Sbjct: 427 TRQCQQAALGALGTWLRSYAPTAPQTLTAGPAEQVAATD 465
>gi|308453105|ref|XP_003089302.1| hypothetical protein CRE_11592 [Caenorhabditis remanei]
gi|308241224|gb|EFO85176.1| hypothetical protein CRE_11592 [Caenorhabditis remanei]
Length = 959
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 49/271 (18%)
Query: 76 HWLAIEGVQPVIPENA-PVQAIAAPSNGTNNEQK------DGLPVEI--KLPVKH--ILS 124
HWL ++GVQP +PEN P + Q+ G+ +I K P ++
Sbjct: 218 HWLVVDGVQPCVPENVIPTEVKQKYQEQQQETQRVFGYGVSGVRKQIPEKRPTTQTVLML 277
Query: 125 RELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSR--GLNNY 182
+E Q+ + ++T++ ++ ++ ++ L ++ TD+G L F +A+ V G N
Sbjct: 278 QEHQVLYAEMTKI-LTNGSALERQKVLETIETDTGFQFLAGRFVILIAEGVRLHIGTKNI 336
Query: 183 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAK---------RLGNRLADN--- 230
L L+++ W+L++NPHI +E YL+ L+PS+++C+V+K R G + +
Sbjct: 337 RGLANLLKLAWSLMKNPHIWLEKYLYVLVPSLISCVVSKSMVPIVDPARAGLKTKTSTVN 396
Query: 231 --------------------HWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLD 270
++LR+ T KL+A + Y L+ R+ + L L
Sbjct: 397 VGTPELTAEDRERIIRDLEFEFKLRESTGKLLAELASIYKD--QNLRVRIIQMLRKVLTG 454
Query: 271 PKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
K + YG + A G + ++LP +
Sbjct: 455 NKDPVA-IYGVLCTFFAFGSLTINTVVLPRM 484
>gi|308492802|ref|XP_003108591.1| hypothetical protein CRE_10940 [Caenorhabditis remanei]
gi|308248331|gb|EFO92283.1| hypothetical protein CRE_10940 [Caenorhabditis remanei]
Length = 839
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 76 HWLAIEGVQPVIPENA-PVQAIAAPSNGTNNEQK------DGLPVEI--KLPVKH--ILS 124
HWL ++GVQP +PEN P + Q+ G+ +I K P ++
Sbjct: 218 HWLVVDGVQPCVPENVIPTEVKQKYQEQQQETQRVFGYGVSGVRKQIPEKRPTTQTVLML 277
Query: 125 RELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSR--GLNNY 182
+E Q+ + ++T++ ++ ++ ++ L ++ TD+G L F +A+ V G N
Sbjct: 278 QEHQVLYAEMTKI-LTNGSALERQKVLETIETDTGFQFLAGRFVILIAEGVRLHIGTKNI 336
Query: 183 SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 223
L L+++ W+L++NPHI +E YL+ L+PS+++C+V+K +
Sbjct: 337 RGLANLLKLAWSLMKNPHIWLEKYLYVLVPSLISCVVSKSM 377
>gi|123975778|ref|XP_001330401.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121896557|gb|EAY01705.1| hypothetical protein TVAG_316930 [Trichomonas vaginalis G3]
Length = 407
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 127/298 (42%), Gaps = 17/298 (5%)
Query: 9 LTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDL-FY-LDDKDVEFKDVIEAPLPR 66
LTTD ++ L+++ + P++GF + L +D FY DK VE +
Sbjct: 58 LTTDHINHILRVQAIPPIFGFTNKSELELTPPQSTQDTTFYAYIDKKVELSQICNETTQT 117
Query: 67 APLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTN------NEQKDGLPVEIKLPVK 120
I + I G I N A+ NG N+ + K +
Sbjct: 118 QNRPREIKTSYKLINGQ---IINNMRTSNPASNDNGIKSIFDQFNKSGNTFDPMSKDKEQ 174
Query: 121 HILSRELQLYFDKI-TELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
+ L+ +L+ ++ I +EL+ + ++++ L+ G+ PL+PYF +F +++ L
Sbjct: 175 NELTEDLKSFYTSIVSELSNPVENETVYEE----LSQTGGIQPLIPYFLHFFYFQIASFL 230
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTA 239
+ + A+ + V LL N +QI+ Y H M + CL K + + A +RD A
Sbjct: 231 DKIEAMKAVGKAVVALLINRSVQIDIYAHSFMK-IGICLATKEVITKCAREDCYIRDIGA 289
Query: 240 KLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+V+ I R + + + + ++ YGA+ G+ +LG + + +L
Sbjct: 290 NIVSLITSRCLNSFPNADIECFNYFNDIIFSENNSIHVLYGALSGIFSLGNDYIERIL 347
>gi|302142820|emb|CBI20115.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 248 RYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
RY HVY+ +Q +T+TLL+A LDP +AL QHYGA+QGLAA GP+VV +LL
Sbjct: 38 RYEHVYHNIQPHVTRTLLHAFLDPIKALPQHYGAIQGLAAFGPSVVSFVLL 88
>gi|341896828|gb|EGT52763.1| CBN-TAF-6.1 protein [Caenorhabditis brenneri]
Length = 471
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 12/212 (5%)
Query: 93 VQAIAAPSNGTNNEQKDGL-PVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQAL 151
+Q T E+K GL P+ I++ L+ E Q++ I + + + D +AL
Sbjct: 201 LQMFREAVKSTKLEEKVGLKPMAIEM-----LTVEQQIFMKDIITVCMGQDDKKR-HEAL 254
Query: 152 VSLATDSGLHPLVPYFTYFVADEVSRGLNN--YSLLFALMRVVWNLLQNPHIQIEPYLHQ 209
+L D+GL ++P+ T + +S ++ SL+ RV+ +L N + LH
Sbjct: 255 YTLENDAGLQVVLPHLTERICKSISANISQRCLSLIIYAGRVLRSLSHNKACDMTVTLHH 314
Query: 210 LMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQT--RLTKTLLN 266
++P++++C V + + R ADNHW LRDF+AK + I + ++ T RL
Sbjct: 315 VLPALLSCCVGRNMCTRPEADNHWALRDFSAKTLVGIVREQVDKRDSGFTARRLFDFSYR 374
Query: 267 ALLDPKRALTQHYGAVQGLAALGPNVVRLLLL 298
DP + YG + L P+ + + L
Sbjct: 375 IFKDPSSSFPMIYGTILILQEFVPDAKKAMWL 406
>gi|219363049|ref|NP_001137111.1| uncharacterized protein LOC100217288 [Zea mays]
gi|194698392|gb|ACF83280.1| unknown [Zea mays]
Length = 107
Score = 71.6 bits (174), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 388 IATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQIPPDSGSESRSKRDKGD 447
+ATD ++++++SM M+ A P + SS +S + +RD+G
Sbjct: 1 MATDATANSMASASMGGNMQ-GAMDGFPNQLGNPGMMQASSSGQTVESIPSAAVRRDQGS 59
Query: 448 SQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMSLFL 495
AQ++SA+L Q WK+D ++G LL SL+E+FGE I SF+ PE+SLF+
Sbjct: 60 DLAQRVSAVLRQAWKEDQDTGHLLGSLYEVFGEAIFSFVQPPEISLFV 107
>gi|198467420|ref|XP_002134530.1| GA22349 [Drosophila pseudoobscura pseudoobscura]
gi|198149236|gb|EDY73157.1| GA22349 [Drosophila pseudoobscura pseudoobscura]
Length = 580
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 18/199 (9%)
Query: 113 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 172
VE+K P + L++E Q ++ I A D AL SL D L ++P T +
Sbjct: 85 VELKPPKRFPLTKEQQAFYQTIIH-ACWGDDKDALADALKSLQIDPSLEYILPQLTTHIV 143
Query: 173 DEVSRGL---NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL------ 223
D + GL + Y + L+ + L++N I + H ++PSV++CL+ +
Sbjct: 144 DGIDEGLYGKDVYQCIVPLL-MAQALVKNSRITFNKHFHLILPSVLSCLLIEEAFEKENA 202
Query: 224 -GNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAV 282
GN HW LR+ ++++ I R YN L R+ + L+ L T YGAV
Sbjct: 203 EGNEF---HWYLRELASRIMGDIV-RVTKNYNLL-GRIIRVLIRGLRRHGNLFTI-YGAV 256
Query: 283 QGLAALGPNVVRLLLLPNL 301
G LG VV LLP L
Sbjct: 257 VGFGQLGSLVVEDYLLPEL 275
>gi|224068877|ref|XP_002302847.1| predicted protein [Populus trichocarpa]
gi|224150375|ref|XP_002336947.1| predicted protein [Populus trichocarpa]
gi|222837204|gb|EEE75583.1| predicted protein [Populus trichocarpa]
gi|222844573|gb|EEE82120.1| predicted protein [Populus trichocarpa]
Length = 58
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 36/42 (85%)
Query: 454 SAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPEMSLFL 495
S L Q+W DDLN+G LLVSLFELFGE ILSFIP+PEMSLFL
Sbjct: 17 SGHLKQLWNDDLNTGHLLVSLFELFGESILSFIPSPEMSLFL 58
>gi|7509154|pir||T32410 hypothetical protein W09B6.2 - Caenorhabditis elegans
Length = 707
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 106 EQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVP 165
+QK GL K IL+ E Q++ I + + + D +AL +L TD+GL +P
Sbjct: 450 DQKVGL----KPSTIEILTVEQQIFMKDIITVCMGQDDKKR-HEALYTLETDAGLQVFLP 504
Query: 166 YFTYFVADEVSRGLNN--YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 223
+ T + +S ++ SL+ RV+ +L N + LH ++P++++C V + +
Sbjct: 505 HLTERICKSISANISQRCLSLIIYAGRVLRSLSHNKACDMTVTLHHVLPALLSCCVGRNM 564
Query: 224 GNR-LADNHWELRDFTAKLVAAICKRYGHVYNTLQT--RLTKTLLNALLDPKRALTQHYG 280
R DNHW LRDF+AK + + + ++ +T RL D + + YG
Sbjct: 565 CLRPETDNHWALRDFSAKTLVGLVRDQVDKHDAGRTARRLFDFSHRIFRDTGSSFSMIYG 624
Query: 281 AVQGLAAL--GPNVVRLLL 297
V L GP LL
Sbjct: 625 TVHILQEFVAGPKKAAWLL 643
>gi|17536589|ref|NP_493919.1| Protein TAF-6.1 [Caenorhabditis elegans]
gi|351059362|emb|CCD73650.1| Protein TAF-6.1 [Caenorhabditis elegans]
Length = 470
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 8/145 (5%)
Query: 106 EQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVP 165
+QK GL K IL+ E Q++ I + + + D +AL +L TD+GL +P
Sbjct: 213 DQKVGL----KPSTIEILTVEQQIFMKDIITVCMGQDDKKRH-EALYTLETDAGLQVFLP 267
Query: 166 YFTYFVADEVSRGLNN--YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL 223
+ T + +S ++ SL+ RV+ +L N + LH ++P++++C V + +
Sbjct: 268 HLTERICKSISANISQRCLSLIIYAGRVLRSLSHNKACDMTVTLHHVLPALLSCCVGRNM 327
Query: 224 GNR-LADNHWELRDFTAKLVAAICK 247
R DNHW LRDF+AK + + +
Sbjct: 328 CLRPETDNHWALRDFSAKTLVGLVR 352
>gi|300120019|emb|CBK19573.2| Transcription initiation factor TFIID (subunit D5) [Blastocystis
hominis]
Length = 349
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 30/220 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKD-----VE 55
M H RRT LT D+++ L + N + + G+ + RR+ R L L DK V
Sbjct: 100 MEHCRRTKLTAGDIEKMLYIYNFDKILGYKN------RRSEMQRSLMVLADKSNTSNIVS 153
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQ-PVIPENAPVQAIAAPSNGTNNEQKDGLPVE 114
+IE+ +P PL+TS +W +EG Q + E S + V
Sbjct: 154 VNHIIESEVPELPLETSFKVNWFVVEGNQIQYLKEMGEDDDSPDDSPDVQLLSQSTRSV- 212
Query: 115 IKLPVKHILSRELQLYFDKITELAVS--RSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 172
H LS E +LY KI S ++ +F Q L TD GL+ + PY +V
Sbjct: 213 ------HSLSFECELYLKKIKSRLYSSEEENTEVFHQ----LQTDEGLNQICPYLVDWVQ 262
Query: 173 DEVSRGLNN-----YSLLFALMRVVWNLLQNPHIQIEPYL 207
+ + + L +++++ +LL N H+ I Y+
Sbjct: 263 STTQKIMQKKPVRMVAYLRYIIQLIHSLLLNRHLHIVSYV 302
>gi|170595895|ref|XP_001902561.1| Transcription initiation factor TFIID subunit 6 [Brugia malayi]
gi|158589697|gb|EDP28589.1| Transcription initiation factor TFIID subunit 6, putative [Brugia
malayi]
Length = 158
Score = 67.8 bits (164), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 3 HSRRTTLTTDDVDEALKLRNVEPVYGFA--SGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
H RR +T +D+D A L P++GF G P RF ++G RDLF DD+D+E V+
Sbjct: 85 HGRRKRVTAEDIDSAFALGGYPPLFGFTVKEGLPFRFAGSMG-RDLFVTDDRDIEITPVV 143
Query: 61 EAPLPRAPLDTSIVC 75
AP + PL+T+I C
Sbjct: 144 NAPAAKLPLETNIKC 158
>gi|402583132|gb|EJW77076.1| hypothetical protein WUBG_12014 [Wuchereria bancrofti]
Length = 197
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 3 HSRRTTLTTDDVDEALKLRNVEPVYGFA--SGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
H RR +T +D+D A + P++GF G P RF ++G RDLF DD+D+E V+
Sbjct: 122 HGRRKRVTAEDIDSAFTMGGYPPLFGFTVKEGLPFRFAGSMG-RDLFVTDDRDIEITPVV 180
Query: 61 EAPLPRAPLDTSIVCHW 77
AP + PL+T+I C +
Sbjct: 181 NAPAAKLPLETNIKCKF 197
>gi|300176085|emb|CBK23396.2| unnamed protein product [Blastocystis hominis]
Length = 284
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 31/224 (13%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKD-----VE 55
M H RRT LT D+++ L + N + + G+ + RR+ R L DK V
Sbjct: 38 MEHCRRTKLTAGDIEKMLYIYNFDKILGYKN------RRSEMQRSFMLLSDKSNDSKIVS 91
Query: 56 FKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEI 115
+IE+ +P P++TS +W +EG Q +Q +++ D V++
Sbjct: 92 VNHIIESEVPELPMETSFKVNWFVVEGNQ--------IQ-YRKEMGEDDDDSDDSPDVQL 142
Query: 116 KLPVKHILSRELQLYFDKITELAVS--RSDSVLFKQALVSLATDSGLHPLVPYFTYFVAD 173
H LS E +LY KI S ++ +F Q L TD GL+ + PY +V
Sbjct: 143 LSQSIHSLSFECELYLKKIKSRLYSSEEENTEVFHQ----LQTDEGLNQICPYLVDWVQS 198
Query: 174 EVSRGLNN-----YSLLFALMRVVWNLLQNPHIQIEPYLHQLMP 212
+ + + L +++++ +LL N H+ I Y+ + P
Sbjct: 199 TTQKIIQQKPVRMVAYLRYIIQLIHSLLLNRHLHIVSYVSLVSP 242
>gi|339246267|ref|XP_003374767.1| transcription initiation factor TFIID subunit 6 [Trichinella
spiralis]
gi|316971978|gb|EFV55686.1| transcription initiation factor TFIID subunit 6 [Trichinella
spiralis]
Length = 420
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 113/261 (43%), Gaps = 27/261 (10%)
Query: 71 TSIVCHWLAIEGVQPVIPENAPV--QAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQ 128
T + HWL IEG QP++PEN + A +N E ++ L ++ +REL
Sbjct: 98 TCLNAHWLGIEGKQPLLPENRSQGRSYVVAEEGMSNIETEELLHQDMNFDQLTEETRELV 157
Query: 129 L-----------------YFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFV 171
L +F ++ F++AL + T GL P + +F F
Sbjct: 158 LELLDGCVSKDETKRFVYFFSSYFYFNNCNNEFCPFQEALRMIQTHVGLQPALSFFVIFY 217
Query: 172 ADEVSRGLNNYSL--LFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLAD 229
+ ++ L L + +++++ LL NP I++ Y +L+PS+++C V + D
Sbjct: 218 LEGINCNLLCKDLRHITCMLQMLNALLLNPAIRLWKYTPKLLPSLLSCAVNMIFDVKCGD 277
Query: 230 NH-WELRDFTAKLVAAICKRYGHV-----YNTLQTRLTKTLLNALLDPKRALTQHYGAVQ 283
+ W +R+ A ++ + + + + L+ + + L D + + YG +
Sbjct: 278 DRAWLVRERAADILGDLLNYFERMAVDDGEDELKIKFIRHLTTIWNDEQTTIPSAYGVLC 337
Query: 284 GLAALGPNVVRLLLLPNLGPY 304
L LG V+ ++PNL +
Sbjct: 338 ILRKLGNLVITSTVIPNLRKF 358
>gi|291244772|ref|XP_002742271.1| PREDICTED: TBP-associated factor 6-like [Saccoglossus kowalevskii]
Length = 154
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDV 59
MRH +R L+T D D ALK+RNVEP+YGF + + FR A G R+L + ++K+ + D+
Sbjct: 65 MRHGKRRRLSTTDFDHALKVRNVEPLYGFQASEFIPFRFASGGGRELHFNEEKETDLNDI 124
Query: 60 IEAPLPRAPLDTSI 73
I P+ P+D S+
Sbjct: 125 INTARPKIPVDVSL 138
>gi|395544396|ref|XP_003774096.1| PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated
factor-associated factor 65 kDa subunit 6L isoform 2
[Sarcophilus harrisii]
Length = 251
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 56/248 (22%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV- 59
M+H++R LT +D + AL+ NVE V G+ S L R A DL++ +D++V ++
Sbjct: 55 MKHTKRRKLTVEDFNRALRWSNVEAVCGYGSQETLPLRPA-REGDLYFPEDREVNLVELA 113
Query: 60 IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLPV 119
+ +P+ +T++ H ++G V P+ + A+++
Sbjct: 114 LATNIPKGCPETAVRVHVSYLDGKGNVEPQGSVPSAVSS--------------------- 152
Query: 120 KHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL 179
L+ +L Y+ ++T AV D L K VS
Sbjct: 153 ---LTDDLLKYYQQVTR-AVLGDDPQLMKVKSVS-------------------------- 182
Query: 180 NNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG--NRLADNHWELRDF 237
++ L L++V +LL+NPH+ + PY+ L+ SV+ C++ N L D HW LRD
Sbjct: 183 HDLEQLHRLLQVARSLLRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLND-HWTLRDG 241
Query: 238 TAKLVAAI 245
A L++ I
Sbjct: 242 AALLLSHI 249
>gi|123492842|ref|XP_001326159.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909069|gb|EAY13936.1| hypothetical protein TVAG_028890 [Trichomonas vaginalis G3]
Length = 398
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 75/156 (48%), Gaps = 1/156 (0%)
Query: 154 LATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPS 213
L D ++ L PY +F+ +++ +N + LM++ + N ++ + Y H +
Sbjct: 190 LEDDELINVLTPYLLHFITGKMAVQYHNVEKIVMLMKMATAIASNNNVDLISYFHPFLRI 249
Query: 214 VVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKR 273
++ L+ +G+ D+ +R ++L+ + + + Y + + +L++ L +
Sbjct: 250 CMSGLIGTDVGSNETDDDSNVRRCASQLLNVLHSKCKNAYPAMTKAIYNSLISVLFNETT 309
Query: 274 ALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLE 309
++ H GAV GL LG ++P+L YL+ L+
Sbjct: 310 SIAAHIGAVYGLEVLGIESCE-RVIPHLAGYLAALQ 344
>gi|238503231|ref|XP_002382849.1| TATA binding protein associated factor, putative [Aspergillus
flavus NRRL3357]
gi|220691659|gb|EED48007.1| TATA binding protein associated factor, putative [Aspergillus
flavus NRRL3357]
Length = 132
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 42/55 (76%), Gaps = 2/55 (3%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA-IG-YRDLFYLDDKD 53
MRHSRRT LTT D+ +AL++ +VEP+YG+ S PLRF A +G + LFY++D++
Sbjct: 48 MRHSRRTLLTTQDIAQALRVLDVEPLYGYESTRPLRFGEASLGPGQPLFYVEDEE 102
>gi|195164473|ref|XP_002023072.1| GL16368 [Drosophila persimilis]
gi|194105134|gb|EDW27177.1| GL16368 [Drosophila persimilis]
Length = 501
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 113 VEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVA 172
VE+K P + L++E Q ++ I A D AL SL D L ++P T +
Sbjct: 85 VELKPPKRFPLTKEQQAFYQTIIH-ACWGDDEDALAHALKSLQIDPSLEYILPQLTTHIV 143
Query: 173 DEVSRGLNN---YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRL------ 223
D + GL + Y + L+ + L++N I + H ++PSV++CL+ +
Sbjct: 144 DGIDEGLYDKDVYQCIVPLL-MAQALVKNRRITFNKHFHLILPSVLSCLLIQEAFEKEDV 202
Query: 224 -GNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYG 280
GN HW LR+ ++++ I R YN L R+ +T N +D A H+G
Sbjct: 203 EGNEF---HWYLRELASRIMGDIV-RVIKSYNLL-GRIIRTPPNE-MDKYVAQYGHFG 254
>gi|123489292|ref|XP_001325361.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121908259|gb|EAY13138.1| hypothetical protein TVAG_444210 [Trichomonas vaginalis G3]
Length = 403
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 4/176 (2%)
Query: 123 LSRELQLYFDKITELAVSRS-DSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNN 181
L +L YF+ T++ S + D++ F L TD G PL+P+F + E++ L+N
Sbjct: 179 LPEDLIDYFNDATDILSSENFDTLEF--VYPKLQTDIGTAPLLPFFLKYFYAEIAEYLDN 236
Query: 182 YSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKL 241
S + + R L+ N ++ I Y+H + T + N L ++ +R +
Sbjct: 237 SSRMIPVARATLALVSNTYLPISLYVHSFLKIAFTLSQTVVVTNNLINDEC-IRQTAGDI 295
Query: 242 VAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLL 297
+ A+ KR Y ++T + L+ +P+ YGA+ L L + R ++
Sbjct: 296 IIALIKRASSEYPGIRTEIFNQLVGVSFNPETNYPALYGALYTLLNLDDDAFRTVI 351
>gi|123438902|ref|XP_001310228.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121891989|gb|EAX97298.1| hypothetical protein TVAG_123480 [Trichomonas vaginalis G3]
Length = 375
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
Query: 124 SRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYS 183
SR L Y I +L ++S L + L + + L PL+PY F+ +E++ N
Sbjct: 179 SRHLAEYVRIINQLRDDTTNSRL--KILDHIRKEPTLQPLIPYLLQFIINELATHYNEPV 236
Query: 184 LLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVA 243
+ ++ V LL N + I + H L+ ++ LV + +A+ ++R +A L+
Sbjct: 237 FVDIVISVACALLDNEFLSISLFAHALIRIALSILVTPDSSSMIAEEDAKIRSESAYLLK 296
Query: 244 AICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAV 282
+ +R Y ++ + L+ L + L HYGA+
Sbjct: 297 RVIERCESGYTEMRVAVFNYLVKILFNANSTLAAHYGAL 335
>gi|321461258|gb|EFX72292.1| hypothetical protein DAPPUDRAFT_326386 [Daphnia pulex]
Length = 1378
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 44/236 (18%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDV--EFKD 58
+RHS+R+ LT DDV+ AL+ +V V+G + P F YL + D+
Sbjct: 67 LRHSKRSKLTKDDVNLALRWSDVPQVHG-PNSTPENF---------LYLSEFDIYSSLDR 116
Query: 59 VIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVEIKLP 118
V+E P++T V+ P +Q +A S +D L EI
Sbjct: 117 VVELT-QEYPIETD----------VEVYSPMKLTIQYLALDS-------EDKLQPEIYFQ 158
Query: 119 VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRG 178
YF+KI++ +S S+ V+ K AL +L + L PL+P + F+ + V
Sbjct: 159 -----------YFEKISQSLLSTSEYVV-KVALANLRENPKLQPLMPTLSGFLRNLVGFT 206
Query: 179 LNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWEL 234
N ++ + R+ LL NPH+ I + ++ L+ G +L D+ ++L
Sbjct: 207 SENSHVVRRIPRIFNALLNNPHLHIGS--EECFLQLIQDLILNHGGEKLDDSIFQL 260
>gi|308486980|ref|XP_003105686.1| CRE-TAF-6.1 protein [Caenorhabditis remanei]
gi|308255142|gb|EFO99094.1| CRE-TAF-6.1 protein [Caenorhabditis remanei]
Length = 314
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 145 VLFKQALVSLATDS---GLHPLVPYFTYFVADEVSRGLNN--YSLLFALMRVVWNLLQNP 199
+L L+S+ D+ L +PY T + +S ++ SL+ RV+ +L N
Sbjct: 83 ILVTIMLLSMENDTISTRLSVFLPYLTERICKSISANISQRCLSLIIYAGRVLRSLSLNK 142
Query: 200 HIQIEPYLHQLMPSVVTCLVAKRLGNR-LADNHWELRDFTAKLVAAICK 247
+ LH ++PS+++C V + + R DNHW LRDF+AK + + +
Sbjct: 143 ACDMTVSLHHVIPSLLSCCVGRNMCLRPETDNHWALRDFSAKTLVMLVR 191
>gi|399949864|gb|AFP65521.1| transcriotion associated factor [Chroomonas mesostigmatica
CCMP1168]
Length = 436
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 150 ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQ 209
L SL D L +VPY ++ + + + S ++++ L N ++EP++HQ
Sbjct: 197 CLESLTKDQSLFAVVPYVIVYLNQFLLKEIKFSSKFEFGIKIIRALFLNNSFKLEPFIHQ 256
Query: 210 LMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALL 269
++P ++ L+ G + +LR ++A ++ I R+G Y LQ+RL+
Sbjct: 257 ILPILIKILIGD-FGKNSSSKVLDLRLYSANIIGFIVNRFGQRYIGLQSRLSFYFSKRFF 315
Query: 270 DPKRALTQHYGAVQGLAALGPNVVRLLLLP 299
+ +GA+ GL LG + L LP
Sbjct: 316 HINENFSVIHGALIGLVVLGNKTLELSGLP 345
>gi|449269236|gb|EMC80031.1| TAF6-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 6L, partial [Columba livia]
Length = 202
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 77/185 (41%), Gaps = 28/185 (15%)
Query: 123 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFV-------ADEV 175
LS L Y+ +T AV D+ L K AL ++ + +P F Y +DEV
Sbjct: 20 LSDNLLRYYHHVT-CAVLGDDAQLMKVALQDQQNNAKITAFLPCFVYAAKQGECGASDEV 78
Query: 176 ----SRGLNNY-------------SLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCL 218
LN++ L ++ V LL NP + + PY+ L SV+ C+
Sbjct: 79 QPNSCVSLNSWVPPSQVKSISHDLPQLHLVLHVAHGLLHNPFLFLGPYVRSLSSSVLYCV 138
Query: 219 VAKRLG--NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALT 276
+ N L D HW LR ++A L+ I +G + L + L AL DP L
Sbjct: 139 LEPLAASINPLND-HWPLRSYSAMLLGRIFWTHGEAVSGLCQYILLALHKALADPVCPLC 197
Query: 277 QHYGA 281
H GA
Sbjct: 198 SHCGA 202
>gi|156087741|ref|XP_001611277.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798531|gb|EDO07709.1| conserved hypothetical protein [Babesia bovis]
Length = 633
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 104 NNEQKDGLPVEIKLP-VKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLAT------ 156
N + K+G I +P V+HIL++E Q +F K + V ++ + + Q V L
Sbjct: 248 NTDDKNGKQTAITIPKVEHILTKE-QRFFLKEIKNTVKKASTTMDHQVHVQLGKVLSILR 306
Query: 157 -DSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVV 215
L L+P F E+ + + A+++ + N IQI ++HQL+ ++
Sbjct: 307 KSPALDQLLPELAAFFVAELEQPTGDVE---AILKFAEAITSNTKIQIHYHIHQLVAPLL 363
Query: 216 TCLVAK--RLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQ---TRLTKTLLNALLD 270
++ + + + + + R AK V + + L+ L K +LD
Sbjct: 364 KLMLKQDDKEDIQAINRNLSFRKLAAKTVGNLARALRESNTGLEGIDQYLMKLYKKTILD 423
Query: 271 PKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLL 308
PK ++T YGA+ G+ L R+L P + L++L
Sbjct: 424 PKCSITMLYGAMCGIEQLPLTAKRILYFPMVPLLLNIL 461
>gi|401396226|ref|XP_003879782.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325114189|emb|CBZ49747.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 956
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 38/227 (16%)
Query: 101 NGTNNEQKDGLPVEIKLPVK---------HILSRELQLYFDKITEL---AVSRSDSV--- 145
+ + ++KD LP L ++ H L +E Q + + E A+ V
Sbjct: 448 DSEDRDEKDRLPSAWPLSLERILVAPRLCHALGKEHQQFLQAVRETLQAAMEEKHGVDYE 507
Query: 146 -LFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIE 204
F++ L +++ GL L+P F A E+ L+ L+R+ +L NPH+ +
Sbjct: 508 RNFRKMLKIVSSIPGLEQLLPCLARFFAVELGGCLHLPHRATLLLRLAEAILANPHLPLH 567
Query: 205 PYLHQLMPSVVTCLV----------------AKRLGNRL---ADNHWELRDFTAKLVAA- 244
++HQ + ++ CL+ A+ + + L ELR A L+ A
Sbjct: 568 SHVHQFLLPLMECLLRPLPLAASSSSPARVPAEPVASALLPFTPQQLELRRQAAHLLGAF 627
Query: 245 ICKRYGH--VYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALG 289
+C+ H +++T + L LL P+ +L GAV G+ ALG
Sbjct: 628 LCRARAHREQMESVETAVLLQLKRHLLHPQSSLETVLGAVWGILALG 674
>gi|399218371|emb|CCF75258.1| unnamed protein product [Babesia microti strain RI]
Length = 945
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 24/231 (10%)
Query: 94 QAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRS------DSVLF 147
+IA +N T NE +P V+H+L +E + + + A++R+ + +
Sbjct: 561 NSIARATN-TANEPTTYIP-----RVEHVLEKEHHFFLNCVKN-AITRAIDLGVIHTSQY 613
Query: 148 KQ---ALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFA---LMRVVWNLLQNPHI 201
KQ L L+T L L+P +YF A ++ + N SL A ++ + L+ NPH
Sbjct: 614 KQLDKVLHILSTSLALDQLMPELSYFFATQMDIHMKN-SLPHAVSIMLSFAYALISNPHA 672
Query: 202 QIEPYLHQLMPSVVTCLVAK-RLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQ--- 257
I ++HQL+ ++ + K L LR A LV I N L+
Sbjct: 673 HIHFHIHQLLIPIIQVAIGKCEFPIVLIYQILRLRKKAANLVGKIAFVLRSSRNGLEFID 732
Query: 258 TRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLL 308
++L L AL + ++ YG++ L+ + P LLL PN LS L
Sbjct: 733 SQLILLLKQALSADEISIFTLYGSIACLSNMSPISRSLLLYPNFNSILSTL 783
>gi|16648300|gb|AAL25415.1| LD25013p [Drosophila melanogaster]
Length = 260
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Query: 81 EGVQPVIPENAPVQAIAAPSNGTNNEQKDGLPVE---IKLPVKHILSRELQLYFDKITEL 137
E VQ +PE P ++ P T L VE +K ++ LS E Q +F+ +TE
Sbjct: 131 ESVQESVPEPVPETSLEPPPMHTG-----WLKVEQVLLKPSKRYPLSMEQQNFFELVTEA 185
Query: 138 AVS--RSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGL--NNYSLLFALMRVVW 193
V S VL AL +++TD L L+P T F+AD V+ + N LL LMR+V
Sbjct: 186 CVGDLESRRVL---ALKAISTDPSLEELLPRLTKFIADAVAINVAQQNLPLLLYLMRMVR 242
Query: 194 NLLQNPHIQIEPYL 207
LL N + Y+
Sbjct: 243 ALLGNQRFSLLQYV 256
>gi|403372730|gb|EJY86271.1| hypothetical protein OXYTRI_15737 [Oxytricha trifallax]
Length = 492
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 1 MRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVI 60
MRHS+R L TDDV +++ ++ ++G+ S P + R ++L+++ +++ K++
Sbjct: 49 MRHSKRDYLKTDDVKLSMEKLSIPNMFGYPSTVPYTYERVPDQQNLWFVKSQNINLKELA 108
Query: 61 EAPLPRAPLD-TSIVCHWLAIEGVQPVIPENAPVQAIAA 98
PLD T+ + A++G QP I E + I A
Sbjct: 109 IDHKLHTPLDSTTYKIYIQALDGNQPKIAETIEEREIPA 147
>gi|167521926|ref|XP_001745301.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776259|gb|EDQ89879.1| predicted protein [Monosiga brevicollis MX1]
Length = 141
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 16/130 (12%)
Query: 60 IEAPLPRAPLDTSIVCHWLAIEG-VQPVIPENAP-----VQAIAAPSNGTNNEQKDGLPV 113
+EAP P D + I+G + +P P V+A A +N N +Q+D
Sbjct: 10 LEAPNPSQNEDLQVELDI--IQGNTESAVPTYLPLGDEAVKAAQAMTN-ANQQQQDQEGA 66
Query: 114 EIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQ-------ALVSLATDSGLHPLVPY 166
+ +H+LS+E QL + I + A+ R KQ AL SL D GL L+P+
Sbjct: 67 TVVGLSRHLLSKEQQLLYKHIIQGAMMRVGEHNTKQGNQFRENALRSLREDPGLQQLLPF 126
Query: 167 FTYFVADEVS 176
F FVA+E S
Sbjct: 127 FIEFVANEAS 136
>gi|321457768|gb|EFX68848.1| hypothetical protein DAPPUDRAFT_259553 [Daphnia pulex]
Length = 117
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 123 LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLN 180
LS E QLY+ KITE V SD +A SLA+D GLH ++P F+A+ V L+
Sbjct: 60 LSVEQQLYYKKITEKCVC-SDQARRAEAFQSLASDPGLHEMLPRLCTFIAEGVRVNLH 116
>gi|145506184|ref|XP_001439058.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406231|emb|CAK71661.1| unnamed protein product [Paramecium tetraurelia]
Length = 459
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 138/334 (41%), Gaps = 31/334 (9%)
Query: 2 RHSRRTTLTTDDVDEALKLRNV--EPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV 59
RH R+ L + D++ A+K +N+ +YGF + + + D + L+D+ ++ +D+
Sbjct: 47 RHFRKKQLNSQDIELAIKDQNLLKSEIYGFQYMDSINLSKRM---DEYVLNDQSLDLRDL 103
Query: 60 IEAPL--PRAPLD------TSIVCHWLAI--EGVQPVIPENAPVQAIA---APSNGTNNE 106
I + + PL +++ + I + Q ++ +Q + S T N
Sbjct: 104 ISHQMRTVKIPLGFPSLSIFNVMKEYQMINSQETQSIMQYKDIMQTESFQNVESKKTFNI 163
Query: 107 QKDGLPVEIKLPVKHILSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPY 166
KD + + + + I+ L+ ++ L + S F Q L L + + +VP+
Sbjct: 164 IKDNVMSILTVHQQSIVKNFKDLFEKEVISLKFNFSQE--FVQLLSDLESYKDVAQIVPF 221
Query: 167 FT-YFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGN 225
Y + + L Y ++ + L+ N I +E LHQ++ +V L AK +
Sbjct: 222 IVQYLYSQQDQVQLFYYKHRCVIIECLNRLIINNQINLEFQLHQILKILVKFLTAKIIEI 281
Query: 226 RLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPK---------RALT 276
+ + EL+ TA+ + + ++ Y L+ + + +L K ++L
Sbjct: 282 NIK-SQIELQIKTARCLNYLLDKFNLKYQALRQNIDRVILEKFERVKSKIEQKCSHKSLL 340
Query: 277 QHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEP 310
+ Y VQ +V L + + + +E
Sbjct: 341 KAYSIVQYFIEQNVSVQHLKFIEQMSELIRKMEQ 374
>gi|145515611|ref|XP_001443705.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411094|emb|CAK76308.1| unnamed protein product [Paramecium tetraurelia]
Length = 667
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 120/284 (42%), Gaps = 24/284 (8%)
Query: 2 RHSRRTTLTTDDVDEALKLRNVEP--VYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV 59
RH R+ L + D++ A+K +N++ ++GF + + + D + L+D+ ++ +D+
Sbjct: 263 RHFRKKQLNSQDIELAIKDQNMQKSEIFGFQYMDSINLCKRM---DEYVLNDQSLDLRDL 319
Query: 60 IEAPL--PRAPLDTSIVCHWLAIEGVQPVIPENA----PVQAIAAPSNGTNNEQKDGLPV 113
I + + PL + + ++ Q + + + I + + E K +
Sbjct: 320 ISHQMRTVKIPLGFPSLSIFNVMKDYQMINSQETQSIMQYKDIIQTESFQSMENKKSFNI 379
Query: 114 EIKLPVKHILSRELQLYFDKITELAVSRSDSVLFK--QALVSLATD-------SGLHPLV 164
IK V IL+ Q +L S+ F Q V L +D + + P +
Sbjct: 380 -IKDNVISILTVHQQSIVKNFKDLFEKEVISLKFNFSQEFVQLLSDLESYKDVAQIVPFI 438
Query: 165 PYFTYFVADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLG 224
+ Y D+V L Y ++ + L+ N I +E LHQ++ +V L AK +
Sbjct: 439 VQYLYSQQDQVQ--LFYYKHRCVIIECLSRLIMNNQINLEFQLHQIIKILVKFLTAKIIE 496
Query: 225 NRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNAL 268
L EL+ TAK + + ++ Y L+ + +LN L
Sbjct: 497 INLKF-QIELQVKTAKCLNYLLDKFNLKYQALRQNVDLVILNKL 539
>gi|449662645|ref|XP_004205586.1| PREDICTED: uncharacterized protein LOC101237825 [Hydra
magnipapillata]
Length = 281
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 154 LATDSGLHPLVPYFTYFVADEV--SRGLNNYSLLFALMRVVWN-LLQNPHIQIEPYLHQL 210
L +++ L ++P+ F+ ++ + ++S + + + N L++N + + PY+ +L
Sbjct: 3 LRSNNKLQVVLPHLITFLCSKIKLTTAKKSFSSVLGFVLLAINALIENDSVLLVPYIFEL 62
Query: 211 MPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLD 270
M SV+ +V + +L W + A ++ IC +Y ++ L +L K +LN L
Sbjct: 63 MKSVL--IVVSDV--KLCVEEWNIHHTAAFVLVKICSKYSVIHPNLLYQLLK-MLNEKLT 117
Query: 271 PKRALTQHYGAVQGLAALGPNVVRLLLLPNL 301
+ +G + + +G + LLP+L
Sbjct: 118 SALPIESLFGVISSIKFMGYKAINEALLPHL 148
>gi|123493108|ref|XP_001326216.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909127|gb|EAY13993.1| hypothetical protein TVAG_491320 [Trichomonas vaginalis G3]
Length = 398
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 58/310 (18%), Positives = 128/310 (41%), Gaps = 33/310 (10%)
Query: 3 HSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEA 62
SRR L D++++L+ +YG+++ + I D+ ++K D++ +
Sbjct: 48 QSRRKKLKISDINDSLEFLAELKLYGYSNTSIPSYI-PIPQSDVLLSEEKMTSIDDILRS 106
Query: 63 PLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKDG--LPVEI----- 115
P + + HW I+G PV PE +Q E+K+ +P EI
Sbjct: 107 NSVSVPEEENFTFHWQLIKGETPVSPE---IQL----------EEKNDQIMPQEIDWKIG 153
Query: 116 --KLPVKHI--LSRELQLYFDKITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFV 171
K+ +H +S + + F +I E + ++ ++++ S + L P++ F+
Sbjct: 154 NYKIKGRHSEPISNQCKEKFTRIIEQFLENNNENIYEEIEKS----ADARVLAPFYIKFI 209
Query: 172 ADEVSRGLNNYSLLFALMRVVWNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNH 231
D ++ L + ++ L N E Y + +T ++ N +
Sbjct: 210 TDFITVNLFDSLQTERILVFTEALFHNEFFAKEVYSNSFFSIALTLAISPEHFN--GAHC 267
Query: 232 WELRDFTAKLVAAICKRYGHVYNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPN 291
+++RD + + I + + ++ + K LN +L Q YG ++ + A+ N
Sbjct: 268 FDIRDEASIFLEEIIQYFSKFNPFIKENILKR-LNMMLSTNN-YQQRYGLLRCIFAISQN 325
Query: 292 VVRLLLLPNL 301
+ +++P +
Sbjct: 326 TFKSIIIPKI 335
>gi|307103584|gb|EFN51843.1| hypothetical protein CHLNCDRAFT_139708 [Chlorella variabilis]
Length = 151
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 153 SLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMR 190
SLATD GL P++PY +ADEV R L + L ++R
Sbjct: 114 SLATDPGLQPVLPYLVPLLADEVGRNLKDVQQLRVVLR 151
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,039,570,129
Number of Sequences: 23463169
Number of extensions: 347462895
Number of successful extensions: 1015102
Number of sequences better than 100.0: 575
Number of HSP's better than 100.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 1012618
Number of HSP's gapped (non-prelim): 820
length of query: 495
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 348
effective length of database: 8,910,109,524
effective search space: 3100718114352
effective search space used: 3100718114352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)