Query 011041
Match_columns 495
No_of_seqs 492 out of 3401
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 07:27:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011041.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011041hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0600 Cdc2-related protein k 100.0 2.4E-86 5.2E-91 657.6 27.3 393 81-476 80-472 (560)
2 KOG0663 Protein kinase PITSLRE 100.0 1.2E-64 2.5E-69 480.0 20.2 308 115-424 73-384 (419)
3 KOG0659 Cdk activating kinase 100.0 2.3E-63 5.1E-68 458.5 21.3 295 118-419 2-299 (318)
4 KOG0593 Predicted protein kina 100.0 9.6E-62 2.1E-66 454.7 18.4 287 117-406 1-289 (396)
5 KOG0661 MAPK related serine/th 100.0 2.9E-62 6.3E-67 482.6 14.2 288 116-407 8-297 (538)
6 KOG0615 Serine/threonine prote 100.0 2.1E-61 4.5E-66 469.3 14.7 264 116-408 170-444 (475)
7 KOG0575 Polo-like serine/threo 100.0 4.1E-58 8.8E-63 466.9 23.7 257 118-407 18-275 (592)
8 KOG0598 Ribosomal protein S6 k 100.0 1.7E-57 3.7E-62 439.0 19.5 262 116-409 23-289 (357)
9 KOG0660 Mitogen-activated prot 100.0 2.9E-57 6.3E-62 435.8 19.8 290 118-408 22-317 (359)
10 KOG0594 Protein kinase PCTAIRE 100.0 8.4E-57 1.8E-61 434.0 22.2 292 117-409 10-310 (323)
11 KOG0592 3-phosphoinositide-dep 100.0 8E-56 1.7E-60 443.2 24.0 263 115-409 70-346 (604)
12 KOG0033 Ca2+/calmodulin-depend 100.0 3.2E-58 7E-63 419.4 5.3 286 116-437 9-297 (355)
13 KOG0605 NDR and related serine 100.0 2E-55 4.3E-60 440.8 22.1 275 116-419 139-463 (550)
14 KOG0616 cAMP-dependent protein 100.0 1.6E-55 3.5E-60 412.1 17.9 260 115-410 41-306 (355)
15 KOG0581 Mitogen-activated prot 100.0 2.1E-55 4.6E-60 424.6 18.6 260 117-407 78-341 (364)
16 KOG0658 Glycogen synthase kina 100.0 3.4E-55 7.4E-60 422.2 16.0 281 118-407 24-312 (364)
17 KOG0595 Serine/threonine-prote 100.0 4.2E-54 9.2E-59 418.9 22.7 265 113-408 5-275 (429)
18 KOG0588 Serine/threonine prote 100.0 6.7E-54 1.5E-58 437.4 19.3 262 117-411 11-273 (786)
19 KOG0583 Serine/threonine prote 100.0 1.6E-52 3.5E-57 425.6 25.3 259 116-406 15-280 (370)
20 KOG0662 Cyclin-dependent kinas 100.0 2.5E-53 5.3E-58 371.2 16.6 286 118-407 2-289 (292)
21 KOG0591 NIMA (never in mitosis 100.0 3.2E-54 7E-59 400.4 9.0 250 117-395 18-275 (375)
22 KOG0585 Ca2+/calmodulin-depend 100.0 7.9E-53 1.7E-57 415.3 18.1 265 116-407 95-378 (576)
23 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.9E-51 6.2E-56 406.0 27.2 283 117-404 4-288 (288)
24 KOG0667 Dual-specificity tyros 100.0 8.4E-52 1.8E-56 425.0 24.0 281 118-409 186-510 (586)
25 KOG0610 Putative serine/threon 100.0 2E-51 4.4E-56 400.1 25.4 275 115-419 74-410 (459)
26 KOG0694 Serine/threonine prote 100.0 1.5E-51 3.2E-56 423.4 25.3 262 114-409 364-632 (694)
27 KOG0032 Ca2+/calmodulin-depend 100.0 7.9E-51 1.7E-55 413.2 25.5 264 116-410 33-302 (382)
28 KOG0597 Serine-threonine prote 100.0 3.8E-52 8.3E-57 416.9 14.8 257 118-408 2-258 (808)
29 cd07848 STKc_CDKL5 Catalytic d 100.0 2.5E-50 5.4E-55 398.3 27.0 284 118-404 1-287 (287)
30 KOG0666 Cyclin C-dependent kin 100.0 5.4E-52 1.2E-56 390.1 13.4 293 117-410 23-346 (438)
31 KOG0599 Phosphorylase kinase g 100.0 5.6E-52 1.2E-56 383.7 12.1 260 118-406 17-288 (411)
32 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.9E-50 1.1E-54 400.0 27.0 286 117-408 4-295 (303)
33 KOG0669 Cyclin T-dependent kin 100.0 2.1E-52 4.5E-57 382.8 6.0 294 117-410 16-324 (376)
34 PTZ00036 glycogen synthase kin 100.0 1.7E-49 3.7E-54 416.1 26.4 284 117-408 65-358 (440)
35 cd07845 STKc_CDK10 Catalytic d 100.0 4.4E-49 9.6E-54 394.1 28.0 304 116-420 5-309 (309)
36 KOG0198 MEKK and related serin 100.0 1.7E-50 3.7E-55 396.3 17.0 261 118-407 17-282 (313)
37 KOG0578 p21-activated serine/t 100.0 1.8E-50 3.9E-55 408.0 16.7 257 117-406 272-528 (550)
38 KOG0580 Serine/threonine prote 100.0 9.8E-51 2.1E-55 369.8 12.8 255 117-406 21-278 (281)
39 cd07872 STKc_PCTAIRE2 Catalyti 100.0 7.6E-49 1.6E-53 392.5 27.2 289 116-408 4-293 (309)
40 cd07859 STKc_TDY_MAPK_plant Ca 100.0 6.8E-49 1.5E-53 397.2 27.1 290 119-409 1-298 (338)
41 KOG0611 Predicted serine/threo 100.0 2.3E-50 5E-55 390.1 15.2 255 117-405 52-307 (668)
42 cd07862 STKc_CDK6 Catalytic do 100.0 8.7E-49 1.9E-53 387.9 26.4 282 118-404 1-290 (290)
43 cd07853 STKc_NLK Catalytic dom 100.0 6.9E-49 1.5E-53 403.3 24.0 289 119-408 1-295 (372)
44 KOG0582 Ste20-like serine/thre 100.0 9E-49 2E-53 384.4 23.0 271 115-407 23-299 (516)
45 cd07876 STKc_JNK2 Catalytic do 100.0 3.7E-48 8.1E-53 395.9 27.1 285 117-407 20-321 (359)
46 PTZ00284 protein kinase; Provi 100.0 1.5E-47 3.2E-52 404.9 31.9 281 117-407 128-444 (467)
47 cd05612 STKc_PRKX_like Catalyt 100.0 1.1E-48 2.3E-53 388.3 21.6 256 118-409 1-262 (291)
48 cd07875 STKc_JNK1 Catalytic do 100.0 5.5E-48 1.2E-52 395.4 27.4 285 117-407 23-324 (364)
49 PHA03212 serine/threonine kina 100.0 1.9E-48 4E-53 402.2 24.0 282 117-410 91-385 (391)
50 cd07863 STKc_CDK4 Catalytic do 100.0 5.4E-48 1.2E-52 381.6 26.3 281 119-404 1-288 (288)
51 KOG4717 Serine/threonine prote 100.0 2.7E-49 6E-54 392.2 16.4 258 117-407 17-276 (864)
52 cd07873 STKc_PCTAIRE1 Catalyti 100.0 8.6E-48 1.9E-52 383.3 27.3 287 116-406 4-291 (301)
53 PTZ00263 protein kinase A cata 100.0 1.3E-48 2.8E-53 394.7 21.2 259 116-410 16-280 (329)
54 cd05628 STKc_NDR1 Catalytic do 100.0 3.4E-48 7.4E-53 396.9 23.5 264 118-410 1-302 (363)
55 cd05571 STKc_PKB Catalytic dom 100.0 1.9E-48 4E-53 392.5 20.4 253 124-409 1-259 (323)
56 cd07868 STKc_CDK8 Catalytic do 100.0 1.6E-47 3.5E-52 384.0 26.9 278 123-404 6-317 (317)
57 cd07839 STKc_CDK5 Catalytic do 100.0 1E-47 2.3E-52 378.8 25.1 282 119-404 1-284 (284)
58 cd07874 STKc_JNK3 Catalytic do 100.0 1.7E-47 3.8E-52 390.3 26.5 285 117-407 16-317 (355)
59 cd05599 STKc_NDR_like Catalyti 100.0 2.8E-48 6.1E-53 397.4 20.4 264 118-410 1-305 (364)
60 cd07861 STKc_CDK1_euk Catalyti 100.0 2.3E-47 5E-52 376.3 25.8 283 119-404 1-285 (285)
61 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.7E-47 3.6E-52 388.5 25.1 285 117-407 14-304 (343)
62 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6.4E-48 1.4E-52 390.0 21.8 265 118-410 1-266 (333)
63 cd05626 STKc_LATS2 Catalytic d 100.0 8.2E-48 1.8E-52 396.6 22.9 263 119-409 2-313 (381)
64 cd05631 STKc_GRK4 Catalytic do 100.0 1.2E-47 2.7E-52 379.4 22.8 261 119-409 1-269 (285)
65 PTZ00426 cAMP-dependent protei 100.0 6.9E-48 1.5E-52 391.0 20.9 259 116-410 28-293 (340)
66 cd05625 STKc_LATS1 Catalytic d 100.0 1.2E-47 2.6E-52 395.4 21.2 262 119-409 2-313 (382)
67 cd05629 STKc_NDR_like_fungal C 100.0 9.7E-48 2.1E-52 395.5 20.5 263 118-409 1-313 (377)
68 cd05596 STKc_ROCK Catalytic do 100.0 1.4E-47 3E-52 393.3 21.2 267 116-410 41-313 (370)
69 cd05598 STKc_LATS Catalytic do 100.0 8.1E-48 1.8E-52 395.9 19.0 263 118-409 1-309 (376)
70 cd05593 STKc_PKB_gamma Catalyt 100.0 2.6E-47 5.7E-52 385.0 21.6 253 124-409 1-259 (328)
71 cd07832 STKc_CCRK Catalytic do 100.0 2.1E-46 4.6E-51 369.4 27.4 284 119-405 1-286 (286)
72 cd05595 STKc_PKB_beta Catalyti 100.0 3.3E-47 7.2E-52 383.4 22.0 253 124-409 1-259 (323)
73 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.5E-47 3.2E-52 389.6 19.3 264 118-410 1-294 (350)
74 cd05585 STKc_YPK1_like Catalyt 100.0 3.3E-47 7.2E-52 381.4 21.3 251 126-409 1-255 (312)
75 cd05614 STKc_MSK2_N N-terminal 100.0 2.8E-47 6.1E-52 385.1 20.3 260 119-409 1-275 (332)
76 KOG0201 Serine/threonine prote 100.0 4.9E-49 1.1E-53 386.1 7.1 256 118-406 13-268 (467)
77 KOG0604 MAP kinase-activated p 100.0 1.1E-47 2.4E-52 359.6 15.5 258 117-409 60-330 (400)
78 PLN00034 mitogen-activated pro 100.0 6.8E-46 1.5E-50 378.4 30.2 261 116-409 72-336 (353)
79 cd05601 STKc_CRIK Catalytic do 100.0 1.6E-47 3.5E-52 386.6 18.0 265 118-410 1-272 (330)
80 cd05621 STKc_ROCK2 Catalytic d 100.0 5.4E-47 1.2E-51 388.8 21.5 267 116-410 41-313 (370)
81 cd05627 STKc_NDR2 Catalytic do 100.0 3.4E-47 7.4E-52 389.0 19.4 264 118-410 1-302 (360)
82 cd07867 STKc_CDC2L6 Catalytic 100.0 5.1E-46 1.1E-50 372.8 27.3 278 123-404 6-317 (317)
83 cd05597 STKc_DMPK_like Catalyt 100.0 1.3E-46 2.9E-51 380.3 23.2 268 118-411 1-276 (331)
84 KOG0690 Serine/threonine prote 100.0 1.2E-47 2.7E-52 362.4 14.2 262 116-410 166-433 (516)
85 cd05587 STKc_cPKC Catalytic do 100.0 1.8E-46 4E-51 378.0 23.2 258 119-409 1-265 (324)
86 cd07841 STKc_CDK7 Catalytic do 100.0 1.2E-45 2.5E-50 366.9 28.1 288 119-411 1-292 (298)
87 cd05589 STKc_PKN Catalytic dom 100.0 2.5E-46 5.4E-51 377.1 23.4 256 120-409 1-265 (324)
88 KOG0589 Serine/threonine prote 100.0 2.4E-47 5.2E-52 383.2 15.8 258 117-405 3-262 (426)
89 cd07843 STKc_CDC2L1 Catalytic 100.0 6.1E-46 1.3E-50 368.3 25.7 287 117-404 4-293 (293)
90 cd05590 STKc_nPKC_eta Catalyti 100.0 1.2E-46 2.6E-51 378.9 20.8 253 124-409 1-261 (320)
91 cd05594 STKc_PKB_alpha Catalyt 100.0 7.3E-47 1.6E-51 381.1 19.2 253 124-409 1-260 (325)
92 KOG0612 Rho-associated, coiled 100.0 5E-48 1.1E-52 413.4 11.2 265 117-411 74-348 (1317)
93 cd06649 PKc_MEK2 Catalytic dom 100.0 8.6E-46 1.9E-50 374.3 26.4 283 117-406 4-306 (331)
94 cd07864 STKc_CDK12 Catalytic d 100.0 1.1E-45 2.4E-50 367.6 26.5 289 116-404 5-302 (302)
95 cd07866 STKc_BUR1 Catalytic do 100.0 1.3E-45 2.7E-50 368.3 26.8 288 117-404 7-311 (311)
96 cd07860 STKc_CDK2_3 Catalytic 100.0 6.7E-46 1.4E-50 365.9 24.2 282 119-404 1-284 (284)
97 cd05591 STKc_nPKC_epsilon Cata 100.0 2.1E-46 4.5E-51 377.2 20.5 253 124-409 1-262 (321)
98 cd05616 STKc_cPKC_beta Catalyt 100.0 4.4E-46 9.6E-51 375.1 22.8 258 119-409 1-265 (323)
99 cd05622 STKc_ROCK1 Catalytic d 100.0 3.1E-46 6.7E-51 383.4 22.0 266 117-410 42-313 (371)
100 cd07831 STKc_MOK Catalytic dom 100.0 2.3E-45 5.1E-50 361.2 26.8 281 120-404 1-282 (282)
101 cd07847 STKc_CDKL1_4 Catalytic 100.0 4E-45 8.6E-50 360.3 28.5 283 118-404 1-286 (286)
102 cd07844 STKc_PCTAIRE_like Cata 100.0 2.9E-45 6.2E-50 362.9 27.5 284 117-404 4-291 (291)
103 cd05584 STKc_p70S6K Catalytic 100.0 4.5E-46 9.8E-51 375.1 21.3 254 123-409 1-264 (323)
104 cd05592 STKc_nPKC_theta_delta 100.0 5.8E-46 1.3E-50 373.2 21.7 253 124-409 1-256 (316)
105 cd07840 STKc_CDK9_like Catalyt 100.0 3E-45 6.5E-50 360.9 26.0 285 120-404 1-287 (287)
106 KOG0607 MAP kinase-interacting 100.0 7E-47 1.5E-51 356.7 13.6 261 118-407 77-367 (463)
107 cd05623 STKc_MRCK_alpha Cataly 100.0 6.6E-46 1.4E-50 375.3 21.5 266 118-409 1-274 (332)
108 cd05608 STKc_GRK1 Catalytic do 100.0 1E-45 2.2E-50 364.8 22.1 256 126-410 1-266 (280)
109 cd07836 STKc_Pho85 Catalytic d 100.0 4.7E-45 1E-49 359.6 26.8 282 119-404 1-284 (284)
110 cd05605 STKc_GRK4_like Catalyt 100.0 1.4E-45 3.1E-50 364.7 22.8 262 119-410 1-270 (285)
111 cd05620 STKc_nPKC_delta Cataly 100.0 8.9E-46 1.9E-50 371.9 21.5 253 124-409 1-256 (316)
112 cd05575 STKc_SGK Catalytic dom 100.0 5.7E-46 1.2E-50 374.3 20.1 253 124-409 1-259 (323)
113 cd07865 STKc_CDK9 Catalytic do 100.0 5.6E-45 1.2E-49 363.4 27.0 288 117-404 11-310 (310)
114 cd05588 STKc_aPKC Catalytic do 100.0 1.1E-45 2.4E-50 373.3 21.8 253 124-409 1-270 (329)
115 cd07850 STKc_JNK Catalytic dom 100.0 5.1E-45 1.1E-49 371.9 26.7 285 117-407 15-317 (353)
116 cd05624 STKc_MRCK_beta Catalyt 100.0 9.9E-46 2.2E-50 373.9 21.0 267 118-410 1-275 (331)
117 PLN00009 cyclin-dependent kina 100.0 7.3E-45 1.6E-49 360.7 26.8 286 118-407 2-290 (294)
118 KOG0192 Tyrosine kinase specif 100.0 2.5E-45 5.3E-50 370.0 23.7 253 117-400 40-298 (362)
119 cd05570 STKc_PKC Catalytic dom 100.0 1.4E-45 2.9E-50 370.8 21.6 253 124-409 1-260 (318)
120 PHA03207 serine/threonine kina 100.0 1.4E-44 3E-49 374.0 29.4 281 117-410 91-384 (392)
121 cd07833 STKc_CDKL Catalytic do 100.0 1.1E-44 2.3E-49 357.6 27.0 285 118-404 1-288 (288)
122 cd05582 STKc_RSK_N N-terminal 100.0 4E-46 8.8E-51 374.5 16.9 253 124-409 2-262 (318)
123 cd05615 STKc_cPKC_alpha Cataly 100.0 3.3E-45 7.1E-50 368.9 23.4 258 119-409 1-265 (323)
124 PHA03211 serine/threonine kina 100.0 6.4E-45 1.4E-49 381.5 26.3 277 117-406 168-460 (461)
125 cd07837 STKc_CdkB_plant Cataly 100.0 8.5E-45 1.8E-49 360.0 25.6 286 118-405 1-295 (295)
126 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.1E-44 4.6E-49 356.8 28.2 284 117-404 4-291 (291)
127 cd07846 STKc_CDKL2_3 Catalytic 100.0 7.5E-45 1.6E-49 358.6 24.7 284 118-404 1-286 (286)
128 cd05618 STKc_aPKC_iota Catalyt 100.0 2E-45 4.4E-50 371.4 21.1 253 124-409 1-270 (329)
129 cd07835 STKc_CDK1_like Catalyt 100.0 1.2E-44 2.5E-49 356.9 25.5 281 120-404 1-283 (283)
130 cd05586 STKc_Sck1_like Catalyt 100.0 6.5E-46 1.4E-50 374.9 16.9 253 126-409 1-261 (330)
131 cd05602 STKc_SGK1 Catalytic do 100.0 1.9E-45 4.1E-50 370.8 20.2 253 124-409 1-259 (325)
132 PHA03209 serine/threonine kina 100.0 5.9E-45 1.3E-49 372.1 23.8 276 118-406 66-356 (357)
133 cd05619 STKc_nPKC_theta Cataly 100.0 3.7E-45 7.9E-50 367.4 21.9 253 124-409 1-256 (316)
134 cd05604 STKc_SGK3 Catalytic do 100.0 1.6E-45 3.4E-50 371.4 18.4 253 124-409 1-259 (325)
135 PTZ00024 cyclin-dependent prot 100.0 2.1E-44 4.6E-49 364.5 26.6 296 117-417 7-329 (335)
136 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.4E-44 5.3E-49 364.6 26.7 291 117-410 4-300 (337)
137 cd07849 STKc_ERK1_2_like Catal 100.0 4.2E-44 9.1E-49 362.6 28.4 288 117-407 4-298 (336)
138 PTZ00283 serine/threonine prot 100.0 1.4E-44 3E-49 383.9 25.2 261 117-406 31-302 (496)
139 cd05603 STKc_SGK2 Catalytic do 100.0 3.3E-45 7.1E-50 368.4 19.4 253 124-409 1-259 (321)
140 cd06650 PKc_MEK1 Catalytic dom 100.0 1.5E-44 3.1E-49 365.7 24.1 282 117-406 4-304 (333)
141 KOG0586 Serine/threonine prote 100.0 2.1E-45 4.5E-50 374.4 17.1 261 114-407 52-312 (596)
142 cd07855 STKc_ERK5 Catalytic do 100.0 1.1E-44 2.5E-49 366.5 22.3 290 118-410 5-303 (334)
143 PF00069 Pkinase: Protein kina 100.0 5.7E-45 1.2E-49 353.6 19.0 260 120-404 1-260 (260)
144 KOG0579 Ste20-like serine/thre 100.0 4.2E-46 9E-51 376.6 11.1 259 118-407 32-295 (1187)
145 cd07842 STKc_CDK8_like Catalyt 100.0 4.1E-44 8.9E-49 358.4 25.4 286 119-404 1-316 (316)
146 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.4E-44 3E-49 364.9 22.1 254 124-409 1-268 (327)
147 cd06625 STKc_MEKK3_like Cataly 100.0 5.7E-44 1.2E-48 347.8 25.1 257 118-404 2-263 (263)
148 KOG0986 G protein-coupled rece 100.0 1.7E-45 3.7E-50 361.2 14.1 267 114-410 181-455 (591)
149 cd05630 STKc_GRK6 Catalytic do 100.0 2.9E-44 6.3E-49 355.4 22.7 261 119-409 1-269 (285)
150 PTZ00267 NIMA-related protein 100.0 7.4E-44 1.6E-48 377.5 26.8 257 117-406 66-328 (478)
151 cd07834 STKc_MAPK Catalytic do 100.0 6.7E-44 1.5E-48 359.8 25.1 288 119-407 1-295 (330)
152 PTZ00266 NIMA-related protein 100.0 4.6E-44 1E-48 393.4 25.6 263 115-407 10-301 (1021)
153 KOG0596 Dual specificity; seri 100.0 3.1E-44 6.6E-49 360.0 22.0 259 116-406 359-632 (677)
154 cd05607 STKc_GRK7 Catalytic do 100.0 4.2E-44 9.1E-49 352.7 22.8 255 126-409 1-262 (277)
155 KOG0671 LAMMER dual specificit 100.0 3.7E-45 8.1E-50 353.3 14.8 282 114-406 85-411 (415)
156 cd05632 STKc_GRK5 Catalytic do 100.0 6.6E-44 1.4E-48 352.8 23.8 261 119-409 1-269 (285)
157 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.3E-43 5E-48 358.4 28.0 285 117-407 14-304 (343)
158 cd08223 STKc_Nek4 Catalytic do 100.0 2E-43 4.3E-48 342.8 26.3 255 119-404 1-257 (257)
159 cd07852 STKc_MAPK15 Catalytic 100.0 7.7E-44 1.7E-48 360.7 24.2 289 117-407 6-301 (337)
160 cd05574 STKc_phototropin_like 100.0 1.6E-43 3.5E-48 354.8 26.2 267 118-414 1-302 (316)
161 cd07879 STKc_p38delta_MAPK13 C 100.0 2.1E-43 4.5E-48 358.5 26.8 285 117-408 14-304 (342)
162 cd07829 STKc_CDK_like Catalyti 100.0 1.1E-43 2.4E-48 349.0 24.1 282 120-404 1-282 (282)
163 KOG0577 Serine/threonine prote 100.0 3.8E-45 8.1E-50 367.8 13.5 255 118-406 26-283 (948)
164 cd05118 STKc_CMGC Catalytic do 100.0 9.9E-44 2.1E-48 349.6 23.5 281 120-404 1-283 (283)
165 KOG0668 Casein kinase II, alph 100.0 5.4E-45 1.2E-49 329.8 12.5 281 116-406 36-327 (338)
166 PHA03210 serine/threonine kina 100.0 2.6E-43 5.6E-48 375.0 27.0 284 117-407 147-460 (501)
167 cd08227 PK_STRAD_alpha Pseudok 100.0 1.5E-43 3.4E-48 357.1 23.9 281 122-406 2-312 (327)
168 cd07851 STKc_p38 Catalytic dom 100.0 2.1E-43 4.6E-48 358.6 24.8 285 117-407 14-304 (343)
169 KOG4236 Serine/threonine prote 100.0 2.4E-45 5.1E-50 365.0 9.8 257 119-407 563-825 (888)
170 cd05580 STKc_PKA Catalytic dom 100.0 2.5E-43 5.4E-48 349.3 24.1 257 118-410 1-263 (290)
171 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.4E-43 7.4E-48 357.0 25.3 286 117-407 4-306 (342)
172 cd07877 STKc_p38alpha_MAPK14 C 100.0 8.2E-43 1.8E-47 354.6 27.9 285 117-407 16-306 (345)
173 cd06619 PKc_MKK5 Catalytic dom 100.0 3.2E-43 6.8E-48 346.6 24.0 256 118-407 1-259 (279)
174 cd08529 STKc_FA2-like Catalyti 100.0 6.5E-43 1.4E-47 338.7 25.0 254 119-404 1-256 (256)
175 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.1E-43 4.5E-48 357.6 22.4 254 117-400 6-329 (338)
176 cd06615 PKc_MEK Catalytic doma 100.0 5.3E-43 1.1E-47 350.3 24.3 279 118-406 1-292 (308)
177 cd06645 STKc_MAP4K3 Catalytic 100.0 3.5E-43 7.6E-48 343.4 22.1 257 118-403 9-267 (267)
178 cd06651 STKc_MEKK3 Catalytic d 100.0 8.5E-43 1.8E-47 340.8 24.7 259 118-405 2-265 (266)
179 cd06610 STKc_OSR1_SPAK Catalyt 100.0 6.8E-43 1.5E-47 340.4 23.9 261 118-404 1-267 (267)
180 cd06628 STKc_MAPKKK_Byr2_like 100.0 7.9E-43 1.7E-47 340.7 24.2 255 119-404 1-267 (267)
181 KOG0983 Mitogen-activated prot 100.0 2.5E-43 5.4E-48 326.5 19.1 261 116-407 90-355 (391)
182 cd06646 STKc_MAP4K5 Catalytic 100.0 4.6E-43 1E-47 342.5 22.1 258 117-403 8-267 (267)
183 cd06644 STKc_STK10_LOK Catalyt 100.0 1.2E-42 2.5E-47 344.7 25.2 259 118-407 12-275 (292)
184 cd07838 STKc_CDK4_6_like Catal 100.0 1.7E-42 3.7E-47 341.5 25.8 280 120-404 1-287 (287)
185 cd05609 STKc_MAST Catalytic do 100.0 1.1E-42 2.5E-47 347.2 24.8 265 118-411 1-283 (305)
186 KOG0574 STE20-like serine/thre 100.0 5.2E-46 1.1E-50 348.0 0.6 257 118-408 33-290 (502)
187 cd07857 STKc_MPK1 Catalytic do 100.0 2.2E-42 4.7E-47 349.5 27.0 286 119-406 1-297 (332)
188 cd06643 STKc_SLK Catalytic dom 100.0 1.1E-42 2.5E-47 342.9 24.1 258 119-407 6-268 (282)
189 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 6.2E-43 1.3E-47 345.3 22.2 259 118-407 1-268 (286)
190 cd06611 STKc_SLK_like Catalyti 100.0 7E-43 1.5E-47 343.8 21.8 259 117-406 4-267 (280)
191 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.5E-42 3.3E-47 341.6 23.8 258 118-407 1-267 (283)
192 cd06609 STKc_MST3_like Catalyt 100.0 1.6E-42 3.4E-47 340.2 23.8 257 118-407 1-257 (274)
193 cd07830 STKc_MAK_like Catalyti 100.0 2.3E-42 4.9E-47 340.3 25.0 280 120-404 1-283 (283)
194 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.9E-42 8.5E-47 347.3 27.3 285 116-407 8-294 (328)
195 cd08217 STKc_Nek2 Catalytic do 100.0 2.4E-42 5.2E-47 335.7 24.8 256 119-404 1-265 (265)
196 cd06652 STKc_MEKK2 Catalytic d 100.0 3.1E-42 6.8E-47 336.5 25.1 259 118-405 2-265 (265)
197 cd08221 STKc_Nek9 Catalytic do 100.0 4.3E-42 9.2E-47 333.4 25.9 254 119-404 1-256 (256)
198 cd06637 STKc_TNIK Catalytic do 100.0 1.5E-42 3.3E-47 339.6 22.5 256 118-404 6-272 (272)
199 cd06654 STKc_PAK1 Catalytic do 100.0 2.5E-42 5.4E-47 343.5 24.2 257 117-406 19-275 (296)
200 cd06631 STKc_YSK4 Catalytic do 100.0 3.7E-42 8E-47 335.8 24.7 256 119-404 1-265 (265)
201 cd06613 STKc_MAP4K3_like Catal 100.0 4E-42 8.6E-47 334.3 24.5 257 118-403 3-262 (262)
202 cd06655 STKc_PAK2 Catalytic do 100.0 4E-42 8.7E-47 342.1 24.8 257 118-407 19-275 (296)
203 cd08218 STKc_Nek1 Catalytic do 100.0 3.4E-42 7.4E-47 334.1 23.7 254 119-404 1-256 (256)
204 cd06629 STKc_MAPKKK_Bck1_like 100.0 4.1E-42 8.9E-47 336.7 24.3 261 119-404 2-272 (272)
205 cd06630 STKc_MEKK1 Catalytic d 100.0 2.6E-42 5.6E-47 337.0 22.6 260 119-405 1-268 (268)
206 cd08220 STKc_Nek8 Catalytic do 100.0 6.3E-42 1.4E-46 331.8 25.1 253 119-404 1-256 (256)
207 cd06656 STKc_PAK3 Catalytic do 100.0 2.4E-42 5.2E-47 343.7 22.4 258 117-407 18-275 (297)
208 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.8E-42 1E-46 338.2 23.2 256 118-404 16-282 (282)
209 PHA02988 hypothetical protein; 100.0 5.9E-42 1.3E-46 338.8 23.9 244 124-400 26-274 (283)
210 cd06607 STKc_TAO Catalytic dom 100.0 7.9E-42 1.7E-46 341.4 24.6 255 118-406 15-272 (307)
211 cd05572 STKc_cGK_PKG Catalytic 100.0 7.6E-42 1.6E-46 333.0 23.8 252 126-409 1-260 (262)
212 cd05633 STKc_GRK3 Catalytic do 100.0 5.5E-42 1.2E-46 338.1 23.0 252 125-409 1-263 (279)
213 cd06658 STKc_PAK5 Catalytic do 100.0 3.3E-42 7.1E-47 342.0 21.4 258 118-408 22-279 (292)
214 cd06626 STKc_MEKK4 Catalytic d 100.0 1.6E-41 3.4E-46 330.5 25.7 258 119-404 1-264 (264)
215 KOG0696 Serine/threonine prote 100.0 1.8E-43 4E-48 342.9 11.6 262 116-410 347-615 (683)
216 cd06632 STKc_MEKK1_plant Catal 100.0 1.1E-41 2.4E-46 330.2 24.2 255 119-404 1-258 (258)
217 cd05578 STKc_Yank1 Catalytic d 100.0 3.6E-42 7.9E-47 334.5 20.7 253 119-404 1-258 (258)
218 cd05064 PTKc_EphR_A10 Catalyti 100.0 8.5E-42 1.8E-46 334.0 23.3 252 117-400 4-260 (266)
219 cd06639 STKc_myosinIIIB Cataly 100.0 2E-41 4.3E-46 335.6 25.8 259 117-405 21-291 (291)
220 cd06608 STKc_myosinIII_like Ca 100.0 7.9E-42 1.7E-46 334.1 22.7 258 117-404 5-275 (275)
221 cd06616 PKc_MKK4 Catalytic dom 100.0 4.7E-42 1E-46 339.3 21.0 261 118-406 4-272 (288)
222 cd05577 STKc_GRK Catalytic dom 100.0 5.9E-42 1.3E-46 337.1 21.2 255 126-410 1-263 (277)
223 cd05606 STKc_beta_ARK Catalyti 100.0 1.2E-41 2.6E-46 335.3 23.4 252 125-410 1-264 (278)
224 KOG0665 Jun-N-terminal kinase 100.0 4.7E-43 1E-47 331.6 12.0 282 117-405 16-314 (369)
225 cd06638 STKc_myosinIIIA Cataly 100.0 2.8E-41 6.1E-46 333.3 25.0 261 114-404 14-286 (286)
226 cd06633 STKc_TAO3 Catalytic do 100.0 4.5E-41 9.7E-46 337.2 26.7 256 118-407 21-279 (313)
227 KOG4279 Serine/threonine prote 100.0 8.3E-43 1.8E-47 355.9 14.1 253 125-408 582-839 (1226)
228 cd06612 STKc_MST1_2 Catalytic 100.0 1.3E-41 2.7E-46 329.7 21.7 253 118-404 3-256 (256)
229 cd08225 STKc_Nek5 Catalytic do 100.0 1.9E-41 4.1E-46 328.6 23.0 254 119-404 1-257 (257)
230 cd05048 PTKc_Ror Catalytic Dom 100.0 1.2E-41 2.7E-46 335.3 22.0 253 117-401 4-279 (283)
231 cd06640 STKc_MST4 Catalytic do 100.0 1.7E-41 3.8E-46 333.7 22.9 256 118-407 4-259 (277)
232 cd05581 STKc_PDK1 Catalytic do 100.0 1.3E-41 2.9E-46 333.6 21.9 255 118-404 1-280 (280)
233 cd06605 PKc_MAPKK Catalytic do 100.0 6.2E-42 1.3E-46 333.8 19.4 254 118-406 1-262 (265)
234 cd06917 STKc_NAK1_like Catalyt 100.0 1.4E-41 3.1E-46 333.8 22.0 257 119-407 2-261 (277)
235 KOG0603 Ribosomal protein S6 k 100.0 1.7E-42 3.8E-47 354.8 16.0 250 115-409 319-571 (612)
236 cd05096 PTKc_DDR1 Catalytic do 100.0 3.3E-41 7.2E-46 336.3 24.7 259 117-400 4-300 (304)
237 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.3E-41 2.8E-46 335.8 21.5 260 117-407 4-272 (284)
238 cd05611 STKc_Rim15_like Cataly 100.0 2E-41 4.3E-46 329.7 22.3 253 124-409 2-259 (260)
239 cd06653 STKc_MEKK3_like_1 Cata 100.0 5.4E-41 1.2E-45 327.7 25.4 258 118-404 2-264 (264)
240 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 5.4E-41 1.2E-45 332.0 25.4 262 118-406 1-271 (287)
241 cd06659 STKc_PAK6 Catalytic do 100.0 1.7E-41 3.7E-46 337.7 21.8 259 118-409 21-279 (297)
242 KOG0197 Tyrosine kinases [Sign 100.0 5E-42 1.1E-46 346.0 17.9 247 118-399 206-455 (468)
243 KOG0664 Nemo-like MAPK-related 100.0 2.1E-43 4.6E-48 326.8 7.1 289 117-406 52-348 (449)
244 cd05610 STKc_MASTL Catalytic d 100.0 4.2E-41 9.2E-46 368.9 26.5 149 117-267 3-152 (669)
245 cd06623 PKc_MAPKK_plant_like C 100.0 4.9E-41 1.1E-45 326.8 23.9 256 118-406 1-261 (264)
246 KOG0608 Warts/lats-like serine 100.0 1.2E-42 2.6E-47 351.9 12.9 263 118-409 629-936 (1034)
247 cd06635 STKc_TAO1 Catalytic do 100.0 7E-41 1.5E-45 336.3 25.5 255 118-406 25-282 (317)
248 cd06642 STKc_STK25-YSK1 Cataly 100.0 9.4E-42 2E-46 335.5 18.8 255 118-406 4-258 (277)
249 cd05052 PTKc_Abl Catalytic dom 100.0 5.2E-41 1.1E-45 327.7 23.8 249 118-400 6-257 (263)
250 cd05106 PTKc_CSF-1R Catalytic 100.0 1.5E-41 3.3E-46 349.0 20.8 253 117-400 37-367 (374)
251 cd08219 STKc_Nek3 Catalytic do 100.0 5.9E-41 1.3E-45 325.4 23.8 250 119-401 1-252 (255)
252 KOG0614 cGMP-dependent protein 100.0 5E-43 1.1E-47 347.5 9.0 266 113-410 415-686 (732)
253 KOG1035 eIF-2alpha kinase GCN2 100.0 2.6E-42 5.5E-47 372.4 15.2 263 115-405 476-875 (1351)
254 cd06627 STKc_Cdc7_like Catalyt 100.0 1.2E-40 2.5E-45 322.0 25.3 254 119-404 1-254 (254)
255 cd08215 STKc_Nek Catalytic dom 100.0 8.4E-41 1.8E-45 323.2 24.1 254 119-404 1-258 (258)
256 cd06648 STKc_PAK_II Catalytic 100.0 9.4E-41 2E-45 330.2 24.7 257 118-407 19-275 (285)
257 cd05579 STKc_MAST_like Catalyt 100.0 4E-41 8.6E-46 327.1 21.4 254 126-409 1-265 (265)
258 cd08226 PK_STRAD_beta Pseudoki 100.0 2.3E-41 5E-46 341.4 20.4 278 124-406 4-313 (328)
259 KOG0584 Serine/threonine prote 100.0 4E-42 8.6E-47 350.7 14.5 254 121-407 43-302 (632)
260 KOG0193 Serine/threonine prote 100.0 1.2E-41 2.7E-46 345.1 17.9 254 117-400 391-648 (678)
261 cd06641 STKc_MST3 Catalytic do 100.0 9.9E-41 2.2E-45 328.3 23.6 255 118-406 4-258 (277)
262 PHA03390 pk1 serine/threonine- 100.0 6.9E-41 1.5E-45 328.1 22.1 248 118-406 14-267 (267)
263 cd05061 PTKc_InsR Catalytic do 100.0 1.6E-40 3.4E-45 328.9 24.9 261 117-409 5-288 (288)
264 KOG1989 ARK protein kinase fam 100.0 1.1E-41 2.3E-46 360.7 17.5 252 118-402 37-308 (738)
265 cd05613 STKc_MSK1_N N-terminal 100.0 6.6E-41 1.4E-45 331.6 22.0 264 119-409 1-276 (290)
266 cd06606 STKc_MAPKKK Catalytic 100.0 3E-40 6.6E-45 319.0 26.1 258 119-404 1-260 (260)
267 cd06624 STKc_ASK Catalytic dom 100.0 2.2E-40 4.7E-45 324.0 25.3 254 119-404 9-268 (268)
268 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.6E-40 3.4E-45 322.8 24.1 248 118-400 4-253 (256)
269 cd05054 PTKc_VEGFR Catalytic d 100.0 4E-41 8.8E-46 341.1 20.7 254 118-401 7-329 (337)
270 KOG4645 MAPKKK (MAP kinase kin 100.0 2.6E-43 5.7E-48 381.6 4.9 259 118-406 1235-1499(1509)
271 cd05035 PTKc_Axl_like Catalyti 100.0 1.4E-40 3.1E-45 325.4 23.8 253 120-401 1-268 (273)
272 cd06634 STKc_TAO2 Catalytic do 100.0 1E-40 2.2E-45 333.7 23.1 256 117-406 14-272 (308)
273 cd05104 PTKc_Kit Catalytic dom 100.0 5.9E-41 1.3E-45 344.8 21.9 254 117-401 34-370 (375)
274 cd05049 PTKc_Trk Catalytic dom 100.0 7.8E-41 1.7E-45 328.9 21.7 252 117-400 4-276 (280)
275 cd08216 PK_STRAD Pseudokinase 100.0 7.4E-41 1.6E-45 335.1 21.8 272 130-406 12-300 (314)
276 cd08228 STKc_Nek6 Catalytic do 100.0 2E-40 4.3E-45 323.7 24.2 252 118-400 2-260 (267)
277 KOG1290 Serine/threonine prote 100.0 4.8E-40 1E-44 325.6 26.7 284 117-410 77-559 (590)
278 cd05075 PTKc_Axl Catalytic dom 100.0 2.2E-40 4.7E-45 324.3 24.0 253 120-401 1-267 (272)
279 cd05072 PTKc_Lyn Catalytic dom 100.0 1.9E-40 4E-45 323.0 23.0 249 117-400 5-256 (261)
280 cd08530 STKc_CNK2-like Catalyt 100.0 2E-40 4.4E-45 320.9 23.1 252 119-404 1-256 (256)
281 cd06647 STKc_PAK_I Catalytic d 100.0 9E-41 2E-45 331.8 21.1 258 117-407 18-275 (293)
282 cd05090 PTKc_Ror1 Catalytic do 100.0 2.2E-40 4.8E-45 326.7 23.6 253 117-401 4-279 (283)
283 cd05084 PTKc_Fes Catalytic dom 100.0 2.2E-40 4.7E-45 320.8 23.1 245 124-400 1-248 (252)
284 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.5E-40 5.3E-45 321.9 23.0 250 117-401 3-254 (256)
285 cd05122 PKc_STE Catalytic doma 100.0 5.3E-40 1.1E-44 316.1 25.0 252 119-403 1-253 (253)
286 cd05093 PTKc_TrkB Catalytic do 100.0 2.9E-40 6.2E-45 327.0 23.6 251 117-400 4-274 (288)
287 PRK13184 pknD serine/threonine 100.0 2.6E-40 5.6E-45 362.5 25.3 255 118-401 2-285 (932)
288 cd05062 PTKc_IGF-1R Catalytic 100.0 3E-40 6.6E-45 324.7 23.2 253 117-401 5-274 (277)
289 cd05108 PTKc_EGFR Catalytic do 100.0 2.6E-40 5.7E-45 331.9 23.1 252 117-401 6-264 (316)
290 cd06657 STKc_PAK4 Catalytic do 100.0 3.2E-40 6.9E-45 327.8 22.9 256 120-408 22-277 (292)
291 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.8E-40 8.2E-45 324.2 23.2 253 117-401 5-274 (277)
292 cd05116 PTKc_Syk Catalytic dom 100.0 3.9E-40 8.6E-45 320.3 22.9 244 125-400 2-250 (257)
293 cd05068 PTKc_Frk_like Catalyti 100.0 7.3E-40 1.6E-44 319.0 24.8 249 117-400 5-256 (261)
294 cd06618 PKc_MKK7 Catalytic dom 100.0 4.3E-40 9.4E-45 327.0 23.6 260 116-406 13-278 (296)
295 cd05071 PTKc_Src Catalytic dom 100.0 4.7E-40 1E-44 321.0 23.5 248 117-400 5-255 (262)
296 cd05033 PTKc_EphR Catalytic do 100.0 6.4E-40 1.4E-44 320.3 24.3 253 117-401 3-261 (266)
297 cd05091 PTKc_Ror2 Catalytic do 100.0 1.9E-40 4.1E-45 327.0 20.6 253 117-401 4-279 (283)
298 cd05088 PTKc_Tie2 Catalytic do 100.0 3E-40 6.4E-45 329.6 22.1 252 116-401 5-276 (303)
299 cd05059 PTKc_Tec_like Catalyti 100.0 4.4E-40 9.5E-45 319.8 22.6 249 118-401 4-254 (256)
300 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.1E-40 1.1E-44 319.9 22.6 248 117-400 5-255 (260)
301 cd00192 PTKc Catalytic domain 100.0 8E-40 1.7E-44 317.1 23.7 246 124-401 1-260 (262)
302 cd08229 STKc_Nek7 Catalytic do 100.0 4.1E-40 9E-45 321.5 21.8 252 118-400 2-260 (267)
303 cd05053 PTKc_FGFR Catalytic do 100.0 5.2E-40 1.1E-44 325.6 22.7 253 117-401 11-287 (293)
304 cd05089 PTKc_Tie1 Catalytic do 100.0 6.4E-40 1.4E-44 326.1 23.4 250 118-401 2-271 (297)
305 cd05051 PTKc_DDR Catalytic dom 100.0 5.8E-40 1.3E-44 325.5 23.0 259 117-400 4-292 (296)
306 cd05583 STKc_MSK_N N-terminal 100.0 5.7E-40 1.2E-44 324.6 22.5 264 119-409 1-274 (288)
307 cd06614 STKc_PAK Catalytic dom 100.0 5.3E-40 1.1E-44 324.5 22.1 258 117-407 18-276 (286)
308 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.1E-40 8.9E-45 320.4 20.5 249 117-400 5-256 (261)
309 cd05032 PTKc_InsR_like Catalyt 100.0 1.3E-39 2.7E-44 319.8 24.0 252 117-400 5-273 (277)
310 cd05034 PTKc_Src_like Catalyti 100.0 1.9E-39 4E-44 315.8 24.6 249 117-400 5-256 (261)
311 KOG0695 Serine/threonine prote 100.0 4E-40 8.6E-45 312.5 19.1 262 116-410 248-525 (593)
312 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.9E-39 6.3E-44 315.1 25.8 252 118-400 2-260 (267)
313 KOG0670 U4/U6-associated splic 100.0 3.9E-41 8.4E-46 334.9 12.3 280 117-406 431-751 (752)
314 cd05109 PTKc_HER2 Catalytic do 100.0 1.7E-39 3.7E-44 319.7 23.8 251 117-400 6-263 (279)
315 cd05094 PTKc_TrkC Catalytic do 100.0 1.3E-39 2.9E-44 322.7 23.1 251 117-400 4-277 (291)
316 cd05069 PTKc_Yes Catalytic dom 100.0 2.3E-39 4.9E-44 315.5 24.3 247 118-400 6-255 (260)
317 cd05123 STKc_AGC Catalytic dom 100.0 1.6E-39 3.4E-44 313.9 22.9 246 126-404 1-250 (250)
318 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.8E-39 4E-44 316.0 23.3 248 117-400 5-255 (260)
319 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.2E-39 2.6E-44 337.1 23.0 253 117-400 36-392 (400)
320 cd05060 PTKc_Syk_like Catalyti 100.0 2.1E-39 4.5E-44 315.1 23.2 244 124-400 1-250 (257)
321 KOG2345 Serine/threonine prote 100.0 6.2E-41 1.3E-45 307.1 11.6 259 116-401 19-296 (302)
322 cd05092 PTKc_TrkA Catalytic do 100.0 1.7E-39 3.6E-44 320.2 22.6 251 117-400 4-276 (280)
323 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.7E-39 3.8E-44 324.5 23.0 253 117-401 17-295 (307)
324 cd05055 PTKc_PDGFR Catalytic d 100.0 2.8E-39 6E-44 322.6 24.0 253 117-400 34-296 (302)
325 cd05097 PTKc_DDR_like Catalyti 100.0 1.7E-39 3.7E-44 322.6 22.1 259 117-400 4-291 (295)
326 cd05066 PTKc_EphR_A Catalytic 100.0 3.1E-39 6.6E-44 315.9 23.5 252 117-400 3-261 (267)
327 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.1E-39 6.6E-44 318.6 23.4 266 118-400 3-276 (283)
328 cd05063 PTKc_EphR_A2 Catalytic 100.0 3.8E-39 8.3E-44 315.0 23.9 252 117-400 4-262 (268)
329 cd05039 PTKc_Csk_like Catalyti 100.0 3.9E-39 8.4E-44 312.8 23.7 244 117-400 5-251 (256)
330 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.8E-39 3.8E-44 329.9 21.9 255 117-401 6-335 (343)
331 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.1E-39 9E-44 322.9 24.1 252 117-400 11-288 (314)
332 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.1E-39 6.7E-44 322.1 23.0 253 117-401 14-292 (304)
333 cd08222 STKc_Nek11 Catalytic d 100.0 2.2E-39 4.7E-44 315.3 21.4 253 119-404 1-260 (260)
334 cd05111 PTK_HER3 Pseudokinase 100.0 4.5E-39 9.7E-44 317.1 23.8 251 117-400 6-263 (279)
335 cd05065 PTKc_EphR_B Catalytic 100.0 3.9E-39 8.4E-44 315.3 23.1 252 117-400 3-263 (269)
336 cd05112 PTKc_Itk Catalytic dom 100.0 5.4E-39 1.2E-43 311.6 23.7 249 118-401 4-254 (256)
337 cd05045 PTKc_RET Catalytic dom 100.0 4.1E-39 9E-44 318.9 23.3 250 119-400 1-281 (290)
338 smart00219 TyrKc Tyrosine kina 100.0 4.1E-39 9E-44 311.9 22.7 249 120-400 1-256 (258)
339 cd05050 PTKc_Musk Catalytic do 100.0 3.5E-39 7.6E-44 319.0 22.6 252 117-400 4-284 (288)
340 cd05085 PTKc_Fer Catalytic dom 100.0 8.7E-39 1.9E-43 309.0 24.5 244 124-400 1-246 (250)
341 cd05046 PTK_CCK4 Pseudokinase 100.0 4.7E-39 1E-43 315.6 22.9 253 118-401 5-272 (275)
342 cd05082 PTKc_Csk Catalytic dom 100.0 5.4E-39 1.2E-43 312.0 22.8 244 117-400 5-251 (256)
343 PLN03225 Serine/threonine-prot 100.0 3.1E-39 6.6E-44 346.5 23.1 279 116-409 130-458 (566)
344 cd05115 PTKc_Zap-70 Catalytic 100.0 7.3E-39 1.6E-43 311.8 23.7 243 125-400 2-250 (257)
345 cd05056 PTKc_FAK Catalytic dom 100.0 7.5E-39 1.6E-43 313.4 23.9 251 117-400 5-260 (270)
346 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.1E-38 2.4E-43 314.6 25.0 267 118-400 4-278 (284)
347 cd05041 PTKc_Fes_like Catalyti 100.0 9E-39 2E-43 309.1 23.1 244 124-400 1-247 (251)
348 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 5.5E-39 1.2E-43 317.1 21.8 269 118-401 4-279 (284)
349 cd05040 PTKc_Ack_like Catalyti 100.0 8.2E-39 1.8E-43 310.5 22.7 245 124-400 1-253 (257)
350 cd05043 PTK_Ryk Pseudokinase d 100.0 8.9E-39 1.9E-43 314.6 23.2 253 117-400 5-271 (280)
351 cd05073 PTKc_Hck Catalytic dom 100.0 1.4E-38 3E-43 310.0 24.2 248 117-400 5-255 (260)
352 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 6.5E-39 1.4E-43 313.2 22.0 239 124-401 1-260 (262)
353 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.3E-39 4.9E-44 315.3 18.5 239 124-401 1-256 (258)
354 cd05100 PTKc_FGFR3 Catalytic d 100.0 7.5E-39 1.6E-43 323.9 22.9 253 117-401 11-289 (334)
355 cd05095 PTKc_DDR2 Catalytic do 100.0 1E-38 2.3E-43 317.1 23.4 258 118-400 5-292 (296)
356 PF07714 Pkinase_Tyr: Protein 100.0 3.1E-39 6.8E-44 315.0 18.6 248 121-400 2-257 (259)
357 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 9.3E-39 2E-43 314.2 22.0 238 125-401 2-272 (274)
358 cd05047 PTKc_Tie Catalytic dom 100.0 1.2E-38 2.7E-43 312.2 22.4 242 125-400 2-263 (270)
359 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.3E-38 2.8E-43 329.4 23.3 254 117-401 36-395 (401)
360 cd05042 PTKc_Aatyk Catalytic d 100.0 1.9E-38 4E-43 310.5 22.8 249 125-400 2-265 (269)
361 cd05057 PTKc_EGFR_like Catalyt 100.0 3.2E-38 6.9E-43 310.7 24.0 251 117-400 6-263 (279)
362 PHA02882 putative serine/threo 100.0 4.6E-38 1E-42 312.6 24.7 261 117-400 11-291 (294)
363 KOG4721 Serine/threonine prote 100.0 4.4E-40 9.6E-45 330.1 10.0 239 121-402 127-365 (904)
364 cd05058 PTKc_Met_Ron Catalytic 100.0 3.9E-38 8.5E-43 306.6 23.4 246 124-400 1-254 (262)
365 cd08528 STKc_Nek10 Catalytic d 100.0 4.6E-38 1E-42 307.5 23.7 251 119-401 1-266 (269)
366 cd05576 STKc_RPK118_like Catal 100.0 4.6E-39 9.9E-44 309.5 16.3 229 129-404 4-237 (237)
367 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.1E-38 6.7E-43 309.2 22.1 253 120-401 1-268 (273)
368 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 6E-38 1.3E-42 307.0 23.9 250 124-400 1-265 (269)
369 cd05110 PTKc_HER4 Catalytic do 100.0 5.8E-38 1.2E-42 313.1 22.9 252 117-401 6-264 (303)
370 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.7E-38 1E-42 305.2 21.4 236 124-400 1-256 (259)
371 cd05044 PTKc_c-ros Catalytic d 100.0 4.4E-38 9.5E-43 307.5 20.7 244 125-400 2-265 (269)
372 cd05083 PTKc_Chk Catalytic dom 100.0 6E-38 1.3E-42 304.3 21.4 242 117-400 5-249 (254)
373 KOG1187 Serine/threonine prote 100.0 5.4E-38 1.2E-42 318.5 21.4 257 118-400 75-347 (361)
374 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 7.2E-38 1.6E-42 308.0 21.6 257 118-400 4-278 (284)
375 KOG1151 Tousled-like protein k 100.0 1.8E-39 4E-44 317.4 8.9 265 116-407 461-747 (775)
376 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.7E-37 5.8E-42 302.6 23.9 249 125-400 2-264 (268)
377 KOG1026 Nerve growth factor re 100.0 1.6E-38 3.4E-43 335.3 15.4 251 117-399 485-756 (774)
378 KOG4250 TANK binding protein k 100.0 1.7E-38 3.8E-43 327.8 13.9 203 118-323 13-226 (732)
379 KOG1006 Mitogen-activated prot 100.0 1.3E-39 2.8E-44 300.9 4.7 262 117-406 63-332 (361)
380 KOG0587 Traf2- and Nck-interac 100.0 1E-37 2.2E-42 327.7 18.0 263 114-406 15-287 (953)
381 KOG0194 Protein tyrosine kinas 100.0 1E-37 2.2E-42 319.3 16.6 253 117-400 156-415 (474)
382 KOG1095 Protein tyrosine kinas 100.0 8.8E-37 1.9E-41 332.7 21.4 253 116-400 690-956 (1025)
383 PLN03224 probable serine/threo 100.0 4.4E-36 9.6E-41 315.1 22.6 275 116-406 143-505 (507)
384 smart00220 S_TKc Serine/Threon 100.0 1.7E-35 3.7E-40 282.5 22.1 243 130-404 1-244 (244)
385 KOG1167 Serine/threonine prote 100.0 8.2E-37 1.8E-41 299.2 10.0 281 117-406 35-386 (418)
386 KOG1094 Discoidin domain recep 100.0 1.8E-35 3.9E-40 298.1 19.8 257 118-400 538-799 (807)
387 KOG4257 Focal adhesion tyrosin 100.0 1.4E-35 3.1E-40 300.5 17.6 245 122-399 393-643 (974)
388 KOG0196 Tyrosine kinase, EPH ( 100.0 5E-36 1.1E-40 310.8 11.7 252 117-400 628-886 (996)
389 KOG0576 Mitogen-activated prot 100.0 1.1E-36 2.5E-41 311.1 6.1 261 117-406 14-276 (829)
390 KOG0199 ACK and related non-re 100.0 8.5E-35 1.8E-39 298.1 14.4 251 117-400 109-367 (1039)
391 KOG0984 Mitogen-activated prot 100.0 2E-34 4.3E-39 257.7 14.9 214 117-335 45-267 (282)
392 KOG1152 Signal transduction se 100.0 3.1E-35 6.8E-40 296.2 10.4 205 114-323 557-771 (772)
393 KOG4278 Protein tyrosine kinas 100.0 2.6E-34 5.6E-39 290.9 16.1 245 119-400 268-518 (1157)
394 KOG1027 Serine/threonine prote 100.0 5.2E-35 1.1E-39 306.0 8.3 246 123-406 514-772 (903)
395 PLN00113 leucine-rich repeat r 100.0 1.4E-33 3.1E-38 323.6 19.4 252 119-401 691-947 (968)
396 KOG3653 Transforming growth fa 100.0 4.8E-32 1E-36 268.4 13.4 197 117-321 209-424 (534)
397 cd00180 PKc Catalytic domain o 100.0 1.8E-30 3.8E-35 241.4 21.3 213 126-402 1-215 (215)
398 KOG0200 Fibroblast/platelet-de 100.0 5.9E-31 1.3E-35 285.1 20.6 249 120-400 298-574 (609)
399 smart00221 STYKc Protein kinas 100.0 2.1E-30 4.6E-35 245.1 21.2 212 120-334 1-215 (225)
400 PLN00181 protein SPA1-RELATED; 100.0 6.3E-32 1.4E-36 303.0 9.7 203 173-406 28-270 (793)
401 KOG2052 Activin A type IB rece 100.0 1.8E-30 3.8E-35 255.6 17.7 252 117-400 210-498 (513)
402 KOG1025 Epidermal growth facto 100.0 2.3E-30 5.1E-35 269.7 13.9 250 118-400 696-952 (1177)
403 KOG1345 Serine/threonine kinas 100.0 9.2E-31 2E-35 242.9 7.3 257 117-404 23-290 (378)
404 KOG0590 Checkpoint kinase and 100.0 1.8E-29 3.9E-34 270.6 6.1 266 118-407 317-591 (601)
405 smart00750 KIND kinase non-cat 100.0 3E-28 6.5E-33 223.1 11.4 165 204-405 2-169 (176)
406 COG0515 SPS1 Serine/threonine 99.9 3.6E-26 7.7E-31 225.6 23.9 263 120-407 2-281 (384)
407 PRK09188 serine/threonine prot 99.9 4.1E-27 9E-32 237.7 16.6 164 117-293 17-193 (365)
408 KOG0603 Ribosomal protein S6 k 99.9 8.5E-29 1.8E-33 254.3 3.1 243 125-410 1-252 (612)
409 KOG1024 Receptor-like protein 99.9 2.6E-26 5.6E-31 222.7 17.0 252 118-400 284-550 (563)
410 KOG0606 Microtubule-associated 99.9 6.3E-27 1.4E-31 251.1 10.1 226 117-410 82-324 (1205)
411 KOG1164 Casein kinase (serine/ 99.9 2.9E-25 6.3E-30 223.6 21.4 254 119-400 19-292 (322)
412 KOG1163 Casein kinase (serine/ 99.9 5.2E-25 1.1E-29 201.6 13.7 205 116-327 13-227 (341)
413 KOG1165 Casein kinase (serine/ 99.9 1.3E-24 2.8E-29 207.3 14.9 209 118-333 28-251 (449)
414 cd05147 RIO1_euk RIO kinase fa 99.9 1.8E-24 3.8E-29 201.0 11.1 141 123-269 2-167 (190)
415 PF14531 Kinase-like: Kinase-l 99.9 2E-24 4.4E-29 209.6 9.7 238 118-392 12-288 (288)
416 PRK10359 lipopolysaccharide co 99.9 1.1E-23 2.4E-28 198.6 11.8 174 117-315 30-216 (232)
417 cd05145 RIO1_like RIO kinase f 99.9 2.3E-23 5E-28 193.7 13.8 142 123-270 2-168 (190)
418 PRK12274 serine/threonine prot 99.9 8.6E-23 1.9E-27 188.8 14.9 190 122-326 6-212 (218)
419 KOG4158 BRPK/PTEN-induced prot 99.9 2E-23 4.2E-28 203.3 11.0 260 117-406 156-518 (598)
420 KOG1240 Protein kinase contain 99.9 2.5E-23 5.5E-28 223.7 9.5 249 119-401 24-291 (1431)
421 smart00090 RIO RIO-like kinase 99.8 4.7E-21 1E-25 184.0 12.5 145 118-269 28-198 (237)
422 PRK10345 hypothetical protein; 99.8 9.5E-21 2.1E-25 177.9 13.7 136 123-266 7-156 (210)
423 KOG0590 Checkpoint kinase and 99.8 3.7E-22 8.1E-27 214.3 -1.3 263 118-406 20-291 (601)
424 KOG1166 Mitotic checkpoint ser 99.8 2.6E-20 5.6E-25 204.3 12.5 193 117-319 697-901 (974)
425 KOG1033 eIF-2alpha kinase PEK/ 99.8 5.5E-21 1.2E-25 193.5 5.1 177 193-404 330-515 (516)
426 PRK14879 serine/threonine prot 99.8 3.7E-19 7.9E-24 167.9 14.1 137 124-269 2-144 (211)
427 cd05144 RIO2_C RIO kinase fami 99.8 3.7E-19 8.1E-24 166.5 12.5 139 119-270 16-176 (198)
428 KOG0195 Integrin-linked kinase 99.8 7.2E-20 1.6E-24 170.5 7.4 253 108-399 180-440 (448)
429 TIGR03724 arch_bud32 Kae1-asso 99.8 3.9E-18 8.4E-23 159.5 12.4 133 125-269 1-139 (199)
430 cd05119 RIO RIO kinase family, 99.8 5.9E-18 1.3E-22 156.6 11.9 138 123-270 2-165 (187)
431 PRK09605 bifunctional UGMP fam 99.7 1.6E-17 3.5E-22 178.4 14.2 139 118-269 333-477 (535)
432 KOG1023 Natriuretic peptide re 99.7 2.1E-17 4.5E-22 170.5 9.5 206 171-400 1-219 (484)
433 KOG0601 Cyclin-dependent kinas 99.7 3.1E-17 6.7E-22 169.3 10.7 256 117-406 113-384 (524)
434 PRK01723 3-deoxy-D-manno-octul 99.7 1.7E-16 3.6E-21 152.7 14.2 138 124-268 37-191 (239)
435 cd05120 APH_ChoK_like Aminogly 99.7 4E-16 8.6E-21 137.7 12.1 133 122-269 2-139 (155)
436 KOG0606 Microtubule-associated 99.7 1.7E-17 3.7E-22 179.1 3.5 266 117-411 803-1102(1205)
437 KOG0601 Cyclin-dependent kinas 99.5 3.4E-15 7.3E-20 154.3 4.5 260 108-405 255-518 (524)
438 cd05146 RIO3_euk RIO kinase fa 99.5 1.3E-13 2.7E-18 127.6 12.4 139 124-269 3-174 (197)
439 PRK04750 ubiB putative ubiquin 99.5 1.8E-14 3.9E-19 152.4 6.7 146 117-271 119-316 (537)
440 TIGR01982 UbiB 2-polyprenylphe 99.5 1.1E-13 2.5E-18 144.4 11.4 142 124-270 123-308 (437)
441 KOG1243 Protein kinase [Genera 99.5 7.8E-13 1.7E-17 138.2 16.4 169 136-317 30-199 (690)
442 cd05151 ChoK Choline Kinase (C 99.4 4.9E-13 1.1E-17 121.3 10.0 127 123-267 3-135 (170)
443 KOG1266 Protein kinase [Signal 99.4 4.1E-14 8.9E-19 135.8 1.5 239 133-405 81-335 (458)
444 cd05154 ACAD10_11_like Acyl-Co 99.3 6E-11 1.3E-15 112.2 12.7 142 124-268 4-206 (223)
445 COG3642 Mn2+-dependent serine/ 99.2 7.7E-11 1.7E-15 105.9 11.9 133 124-268 2-140 (204)
446 KOG3087 Serine/threonine prote 99.2 1.2E-10 2.5E-15 104.3 12.7 143 122-268 11-165 (229)
447 PF01163 RIO1: RIO1 family; I 99.1 3.2E-10 6.9E-15 104.5 11.5 127 133-269 1-156 (188)
448 KOG3741 Poly(A) ribonuclease s 99.1 1.6E-09 3.5E-14 110.4 16.7 215 130-401 288-521 (655)
449 KOG2137 Protein kinase [Signal 99.1 3E-11 6.5E-16 127.0 3.9 156 227-408 107-272 (700)
450 PRK15123 lipopolysaccharide co 99.0 3.9E-09 8.4E-14 103.0 13.4 133 133-267 37-193 (268)
451 COG0478 RIO-like serine/threon 99.0 3.6E-09 7.9E-14 100.6 10.1 137 120-268 93-251 (304)
452 COG4248 Uncharacterized protei 98.9 1.5E-08 3.1E-13 101.2 14.4 252 123-399 16-294 (637)
453 PF06293 Kdo: Lipopolysacchari 98.8 3.3E-08 7.2E-13 93.0 12.4 107 162-268 56-170 (206)
454 COG1718 RIO1 Serine/threonine 98.7 2E-07 4.3E-12 88.1 13.7 139 124-270 54-217 (268)
455 COG0661 AarF Predicted unusual 98.7 9.1E-08 2E-12 101.1 10.3 139 124-272 131-318 (517)
456 PRK09902 hypothetical protein; 98.7 4.7E-07 1E-11 84.3 13.4 139 127-268 27-179 (216)
457 KOG0576 Mitogen-activated prot 98.6 6.4E-09 1.4E-13 108.5 0.9 248 118-409 242-492 (829)
458 PF06176 WaaY: Lipopolysacchar 98.6 1.2E-06 2.7E-11 81.9 13.3 140 117-267 30-182 (229)
459 PF01636 APH: Phosphotransfera 98.5 1.3E-06 2.9E-11 82.8 13.6 139 123-267 2-196 (239)
460 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 1.1E-06 2.5E-11 83.7 11.9 134 124-268 7-182 (226)
461 PF13095 FTA2: Kinetochore Sim 98.4 8.5E-06 1.8E-10 75.4 13.9 129 118-266 37-206 (207)
462 PLN02876 acyl-CoA dehydrogenas 98.3 8.9E-06 1.9E-10 92.1 15.3 148 122-270 42-259 (822)
463 cd05150 APH Aminoglycoside 3'- 98.3 7.1E-06 1.5E-10 79.1 12.0 134 125-267 5-192 (244)
464 KOG1035 eIF-2alpha kinase GCN2 98.2 5E-06 1.1E-10 92.7 10.8 205 161-407 226-440 (1351)
465 COG2112 Predicted Ser/Thr prot 98.2 7.1E-06 1.5E-10 73.6 9.4 130 121-269 25-156 (201)
466 KOG1235 Predicted unusual prot 98.1 1.7E-05 3.8E-10 83.8 11.0 140 124-272 167-358 (538)
467 cd05155 APH_ChoK_like_1 Unchar 98.0 2.9E-05 6.3E-10 74.5 10.6 72 124-204 3-79 (235)
468 KOG1826 Ras GTPase activating 98.0 1.8E-06 4E-11 97.9 0.6 256 117-405 1228-1496(2724)
469 PF10707 YrbL-PhoP_reg: PhoP r 97.9 0.00019 4.1E-09 66.9 12.5 129 124-262 7-165 (199)
470 PF12260 PIP49_C: Protein-kina 97.9 4.5E-05 9.7E-10 70.6 8.2 100 165-270 7-113 (188)
471 cd05157 ETNK_euk Ethanolamine 97.9 0.00016 3.5E-09 69.1 12.2 73 123-204 3-77 (235)
472 TIGR02721 ycfN_thiK thiamine k 97.8 9.9E-05 2.2E-09 71.7 9.5 132 126-268 4-175 (256)
473 PRK09550 mtnK methylthioribose 97.7 0.00083 1.8E-08 69.2 14.8 77 123-203 31-115 (401)
474 PRK10593 hypothetical protein; 97.6 0.00075 1.6E-08 67.2 12.9 77 122-204 18-98 (297)
475 cd05153 HomoserineK_II Homoser 97.6 0.00034 7.3E-09 69.4 10.1 139 122-267 18-204 (296)
476 KOG2270 Serine/threonine prote 97.6 0.00079 1.7E-08 67.3 12.1 140 124-269 150-314 (520)
477 PRK05231 homoserine kinase; Pr 97.6 0.001 2.3E-08 66.7 13.1 30 238-267 187-216 (319)
478 cd05156 ChoK_euk Choline Kinas 97.5 0.00056 1.2E-08 68.1 10.8 73 123-204 3-82 (302)
479 TIGR00938 thrB_alt homoserine 97.5 0.00051 1.1E-08 68.7 10.2 142 120-267 24-216 (307)
480 COG3173 Predicted aminoglycosi 97.5 0.0014 3E-08 65.4 13.0 148 121-271 28-231 (321)
481 KOG2268 Serine/threonine prote 97.5 9.9E-05 2.2E-09 72.4 4.6 139 118-269 92-252 (465)
482 KOG1093 Predicted protein kina 97.4 0.00038 8.2E-09 72.1 6.8 173 163-407 28-200 (725)
483 cd05152 MPH2' Macrolide 2'-Pho 97.2 0.0023 5E-08 63.0 10.7 31 239-269 186-217 (276)
484 PLN02421 phosphotransferase, a 97.1 0.0043 9.4E-08 62.7 11.8 150 109-268 6-213 (330)
485 PLN02236 choline kinase 97.1 0.0062 1.3E-07 62.0 12.2 151 109-268 27-231 (344)
486 PLN02756 S-methyl-5-thioribose 97.0 0.0094 2E-07 61.4 12.6 76 122-203 36-119 (418)
487 TIGR01767 MTRK 5-methylthiorib 96.9 0.0077 1.7E-07 61.0 11.0 75 125-203 2-84 (370)
488 TIGR02906 spore_CotS spore coa 96.9 0.0073 1.6E-07 60.2 10.7 29 238-267 187-215 (313)
489 PRK12396 5-methylribose kinase 96.6 0.012 2.6E-07 60.3 10.0 76 123-202 34-116 (409)
490 PF01633 Choline_kinase: Choli 96.5 0.013 2.8E-07 55.1 8.6 31 238-268 143-174 (211)
491 TIGR02904 spore_ysxE spore coa 96.4 0.016 3.5E-07 58.0 9.5 30 239-268 197-226 (309)
492 PTZ00384 choline kinase; Provi 96.4 0.033 7.2E-07 57.4 11.6 90 108-204 41-134 (383)
493 PF03881 Fructosamin_kin: Fruc 96.3 0.027 5.9E-07 55.6 10.0 75 121-204 20-97 (288)
494 COG5072 ALK1 Serine/threonine 96.3 0.014 2.9E-07 58.6 7.5 72 191-268 298-370 (488)
495 COG2334 Putative homoserine ki 96.2 0.084 1.8E-06 53.2 13.4 136 125-267 33-227 (331)
496 PRK06148 hypothetical protein; 96.1 0.12 2.5E-06 60.2 15.2 31 238-268 203-236 (1013)
497 PTZ00296 choline kinase; Provi 96.0 0.07 1.5E-06 56.1 12.2 86 109-204 97-191 (442)
498 PRK11768 serine/threonine prot 95.4 0.37 8E-06 48.6 14.3 28 238-267 196-223 (325)
499 PF07387 Seadorna_VP7: Seadorn 95.2 0.095 2.1E-06 49.3 8.1 116 129-266 73-190 (308)
500 PRK10271 thiK thiamine kinase; 94.5 0.028 6E-07 51.7 2.8 30 239-269 78-107 (188)
No 1
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-86 Score=657.61 Aligned_cols=393 Identities=66% Similarity=1.100 Sum_probs=367.2
Q ss_pred CCCCCCCCCCcccccCCCcchhhhhcccccCCCCCCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHH
Q 011041 81 LSNPPKHVHGEQVAAGWPSWLSAVAGEAISGWTPRRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPES 160 (495)
Q Consensus 81 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~ 160 (495)
..+.++....++..++||.|...++++.+.+|.++..+.|+.+++||+|+||.||+|++..||+.||+|+++++......
T Consensus 80 ~~~~~~~~e~~~~~a~~p~~l~~~~ge~~~~w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~ 159 (560)
T KOG0600|consen 80 PSSVPKSTEAEQVAAGWPAWLSSVAGEALHGWGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGF 159 (560)
T ss_pred CCCCCCcchhhhhhccCccccccccccccccccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcc
Confidence 34445555667889999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q 011041 161 VRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHV 240 (495)
Q Consensus 161 ~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~gi 240 (495)
...+.|||.||++|+||||++|.+++.+...+.+|||||||++||.+++.....+|++.++++||+||+.||+|||++||
T Consensus 160 ~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gv 239 (560)
T KOG0600|consen 160 PITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGV 239 (560)
T ss_pred hHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCe
Confidence 89999999999999999999999999987778999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 011041 241 LHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPI 320 (495)
Q Consensus 241 vHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~p 320 (495)
+|||||..|||||.+|.+||+|||||+++.......+++.|.|+||+|||+|+|...|+.++|+||+||||.||+.|+|+
T Consensus 240 lHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI 319 (560)
T KOG0600|consen 240 LHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPI 319 (560)
T ss_pred eeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCC
Confidence 99999999999999999999999999999988888899999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 321 MPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 321 f~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
|.|.++.+|+++|+++||.|.+++|+..++|....++++.+|++++.+.++.+++.+.+|+..||.+||.+|.||.++|+
T Consensus 320 ~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 320 LQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCChhHhhhcCHHHHHHHHHhccchHHHHHHhhhhhhhhcCCCcchhHHHhhhhhhh
Q 011041 401 SEFFTTKPYACDPSSLPKYPPTKEMDAKLRDEEARRLRAAGKANAEAKKARSRDRAARAMPAPEANAELQANLDVR 476 (495)
Q Consensus 401 hp~f~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (495)
|+||+..|.+|+++.+|.+++.++++.+.++++.++......... ......+..++.|+++++++.++..+.+
T Consensus 400 seyF~t~p~~~~p~~Lp~y~~s~E~~~K~r~e~~r~~~~~~~~~~---~~~~~~~~~r~~p~~~~~~~~~~~~~~~ 472 (560)
T KOG0600|consen 400 SEYFTTEPLPCDPSSLPKYPPSHELDAKRRREQKRRNKGGASKRR---IRERGDRGSRAIPAQPANAESQASPQRR 472 (560)
T ss_pred CcccccCCCCCCcccCCCCCcchhHHHHHHHHHhhcccccccccc---cccccccccCCCCCCCCCHHHhcccccc
Confidence 999999999999999999999999999999988876652221111 1122256678999999999999988866
No 2
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-64 Score=480.01 Aligned_cols=308 Identities=43% Similarity=0.760 Sum_probs=272.4
Q ss_pred CCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 115 RRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 115 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
+..++|+.++.|++|+||+||+|+|+.|++.||+|.++.+.-.....-.-.|||.+|.+++|||||.+.+++....-..+
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 44689999999999999999999999999999999998765322222345689999999999999999999987667789
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
|||||||++|+..++......|...++++++.|++.||+|||.+.|+||||||+|+|+++.|.+||+|||+|+.++.. .
T Consensus 153 y~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp-~ 231 (419)
T KOG0663|consen 153 YIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP-L 231 (419)
T ss_pred eeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC-c
Confidence 999999999999999888889999999999999999999999999999999999999999999999999999998755 3
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC-C
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH-A 353 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~-~ 353 (495)
.+++..+.|.||+|||+++|...|+.++|+||+|||+.||++++|+|+|..+.+++.+|++.+|.|.+..|+...... .
T Consensus 232 k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~ 311 (419)
T KOG0663|consen 232 KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAV 311 (419)
T ss_pred ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchh
Confidence 568889999999999999999999999999999999999999999999999999999999999999999999865433 3
Q ss_pred c-cCCCCcccccccccccCC--CCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCCCCCCCCCCCCCCChh
Q 011041 354 T-IFKPQQSYKRCIAETFKD--FPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPYACDPSSLPKYPPTKE 424 (495)
Q Consensus 354 ~-~~~~~~~~~~~~~~~~~~--~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~~~~~~~~p~~~~~~~ 424 (495)
. ...+..+|. .+...|.. +++...+|+..+|.+||.+|.||.|+|+|.||...|.+++|..+|.+|...+
T Consensus 312 k~~~f~~~pyn-~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~~Pt~P~k~~ 384 (419)
T KOG0663|consen 312 KKMTFSEHPYN-NLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPSMFPTWPAKSE 384 (419)
T ss_pred hccccCCCCch-hhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChhhcCCCccccc
Confidence 2 223333333 34444444 4589999999999999999999999999999999999999999999986544
No 3
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.3e-63 Score=458.46 Aligned_cols=295 Identities=42% Similarity=0.783 Sum_probs=265.7
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|..+++||+|.||.||+|++..||+.||||+|+..+..........|||+.|+.++|+||+.|+++|.+ ...+.||
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~--~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH--KSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC--CCceEEE
Confidence 57899999999999999999999999999999999876654445567799999999999999999999988 4579999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
+|||+.+|...+......|+..+++.|+.+++.||+|||++.|+||||||.|+||+.+|.+||+|||+|+.+.+... ..
T Consensus 80 fEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~-~~ 158 (318)
T KOG0659|consen 80 FEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR-IQ 158 (318)
T ss_pred EEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc-cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999876553 33
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhC-CCCCCccC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKS-KLPHATIF 356 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~-~~~~~~~~ 356 (495)
+..+.|.||+|||++.|...|+..+||||.|||+.||+-|.|.|+|.++.+|+..|++.+|+|.++.|+.. .+|....+
T Consensus 159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~ 238 (318)
T KOG0659|consen 159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKI 238 (318)
T ss_pred ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHH
Confidence 44589999999999999999999999999999999999999999999999999999999999999999974 45554433
Q ss_pred C--CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCCCCCCCCCCCC
Q 011041 357 K--PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPYACDPSSLPKY 419 (495)
Q Consensus 357 ~--~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~~~~~~~~p~~ 419 (495)
. |..+ ....|...++++.||+.+||.+||.+|+|+.|+|+|+||++.|.++++..+|..
T Consensus 239 ~~~P~~~----~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~~lp~p 299 (318)
T KOG0659|consen 239 QQFPKPP----LNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPPSKLPIP 299 (318)
T ss_pred hcCCCCc----cccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCChhhCcCC
Confidence 2 2222 333778888999999999999999999999999999999999999988887754
No 4
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=9.6e-62 Score=454.72 Aligned_cols=287 Identities=34% Similarity=0.578 Sum_probs=250.3
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++.|+.+.++|+|+||+||+|++++||+.||||++.-..-++...+-..|||++|++|+|+|+|.|+++|.. ...+++
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr--krklhL 78 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR--KRKLHL 78 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh--cceeEE
Confidence 367999999999999999999999999999999987655556666677899999999999999999999977 567999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
|||||++..+..+......+++..++.|++|++.|+.|||++++||||||||||||+.+|.+||||||+|+.+.. ....
T Consensus 79 VFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pgd~ 157 (396)
T KOG0593|consen 79 VFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PGDN 157 (396)
T ss_pred EeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC-Ccch
Confidence 999999999888877666799999999999999999999999999999999999999999999999999998864 3356
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhh--CCCCCCc
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKK--SKLPHAT 354 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~--~~~~~~~ 354 (495)
++.++.|.||+|||++.|...||..+|||++||++.||++|.|+|+|.++.+++..|.+.+|...+..... ...-...
T Consensus 158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~G 237 (396)
T KOG0593|consen 158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHG 237 (396)
T ss_pred hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceee
Confidence 78899999999999999999999999999999999999999999999999999999999999987653321 1111112
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
...|...-...+...++.++.-+.||+++||..||++|++.+|+|.|+||.+
T Consensus 238 v~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 238 VRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred eecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 2223333334466777888889999999999999999999999999999943
No 5
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-62 Score=482.65 Aligned_cols=288 Identities=36% Similarity=0.650 Sum_probs=256.7
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCCcee
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLD-HPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~~ 194 (495)
..++|.++++||.|+||.||+|+.+.+|..||||.+++....-+++-. .||++.|++|+ |||||+|.+++.+.. ..+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~n-LREvksL~kln~hpniikL~Evi~d~~-~~L 85 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMN-LREVKSLRKLNPHPNIIKLKEVIRDND-RIL 85 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHH-HHHHHHHHhcCCCCcchhhHHHhhccC-ceE
Confidence 357899999999999999999999999999999999876655554443 47999999998 999999999998853 389
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
|+|||||+..|..++..++..|+|..++.|+.||+.||+|+|.+|++|||||||||||.....|||+|||+|+.+.. .
T Consensus 86 ~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S--k 163 (538)
T KOG0661|consen 86 YFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS--K 163 (538)
T ss_pred eeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc--C
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998754 4
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhh-CCCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKK-SKLPHA 353 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~-~~~~~~ 353 (495)
.+++.+|.|.||+|||+|+....|+.++|||++|||++|+++-+|+|+|.++.+++.+|..++|+|..+.|.. ..+...
T Consensus 164 pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~ 243 (538)
T KOG0661|consen 164 PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASA 243 (538)
T ss_pred CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHH
Confidence 6789999999999999999999999999999999999999999999999999999999999999999999987 344444
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
..|.-...-...+...+...++++.+||..||.|||.+||||.|+|+||||+..
T Consensus 244 mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 244 MNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred hccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence 334333333333556666788999999999999999999999999999999853
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-61 Score=469.27 Aligned_cols=264 Identities=29% Similarity=0.424 Sum_probs=230.6
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCCh-----HHHHHHHHHHHHHHhCCCCCeeeeeceeeccC
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEP-----ESVRFMAREILILRRLDHPNVVKLEGLVTSRM 190 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 190 (495)
..+.|.+.+.||+|+||.|-+|.++.||+.||||++.+..... .....+++|++||++|+|||||+++++|+.
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~-- 247 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV-- 247 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec--
Confidence 3578889999999999999999999999999999998765422 233456799999999999999999999998
Q ss_pred CceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC---CcEEEeeccccc
Q 011041 191 SCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE---GILTIADFGLAS 267 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~---~~vkL~DFG~a~ 267 (495)
..+.||||||++||.+....-..+.+.|...+.+++||+.||.|||++||+||||||||||+..+ ..+||+|||+|+
T Consensus 248 ~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 248 PDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred CCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhh
Confidence 56789999999998777777777789999999999999999999999999999999999999776 689999999999
Q ss_pred ccCCCCCCCCccccccCCCCCcccccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcCCCChhh
Q 011041 268 FFDPNHKQPMTSRVVTLWYRPPELLLGA--TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVE-QLHKIFKLCGSPSEEY 344 (495)
Q Consensus 268 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~-~~~~i~~~~g~~~~~~ 344 (495)
+.+ ....+.+.||||.|.|||++.+. ..|..++||||||||||.+|+|.|||.+..... ..++|.+.-..+.+..
T Consensus 328 ~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~ 405 (475)
T KOG0615|consen 328 VSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQ 405 (475)
T ss_pred ccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChh
Confidence 876 33567889999999999999653 335568999999999999999999999876554 7777877666666666
Q ss_pred hhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCC
Q 011041 345 WKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKP 408 (495)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~ 408 (495)
|. .+++++++||.+||.+||++|||+.|+|+||||+..|
T Consensus 406 w~-------------------------~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 406 WD-------------------------RISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred hh-------------------------hhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 64 4889999999999999999999999999999999754
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-58 Score=466.86 Aligned_cols=257 Identities=28% Similarity=0.441 Sum_probs=232.8
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.+|...+.||+|+|+.||++++..+|+.||+|+|.+..+ .....+++.+||+|.+.|+|||||+++++|++ ..++||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED--s~nVYi 95 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED--SNNVYI 95 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec--CCceEE
Confidence 679999999999999999999999999999999988655 56677889999999999999999999999999 678999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
|+|+|..+.+..+....+.++|.+++.|++||+.||.|||+++|||||||..||||+++.+|||+|||||..+.... +.
T Consensus 96 vLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~-Er 174 (592)
T KOG0575|consen 96 VLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG-ER 174 (592)
T ss_pred EEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcc-cc
Confidence 99999988777777788899999999999999999999999999999999999999999999999999999887543 33
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
-.+.||||.|+|||++.. ..++..+||||+|||||.||+|+|||...+-.+.+.+|...-...
T Consensus 175 k~TlCGTPNYIAPEVl~k-~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~---------------- 237 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNK-SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSM---------------- 237 (592)
T ss_pred cceecCCCcccChhHhcc-CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccc----------------
Confidence 467899999999999985 678999999999999999999999999999999999986532221
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
...++.++.+||..||..||.+|||++++|.|+||+..
T Consensus 238 -------------P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 238 -------------PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred -------------ccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 23588999999999999999999999999999999653
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-57 Score=438.99 Aligned_cols=262 Identities=29% Similarity=0.444 Sum_probs=234.6
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
..++|++++.||+|+||+||+++.++|++.||+|++++... .....+.+..|..||..++||+||.++..|++ ...+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt--~~kL 100 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQT--EEKL 100 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEeccc--CCeE
Confidence 35899999999999999999999999999999999998766 44577889999999999999999999988887 6789
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
|||+||+.||.+...+++.+.|+|..++.|+.+|+.||.|||++|||||||||||||||.+|+++|+|||+++..... .
T Consensus 101 ylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~-~ 179 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD-G 179 (357)
T ss_pred EEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccC-C
Confidence 999999999999888888889999999999999999999999999999999999999999999999999999854322 2
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
....+.|||+.|||||++.+ ..|+..+|+|||||++|||++|.+||.+.+.....++|.+.....
T Consensus 180 ~~t~tfcGT~eYmAPEil~~-~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~-------------- 244 (357)
T KOG0598|consen 180 DATRTFCGTPEYMAPEILLG-KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPL-------------- 244 (357)
T ss_pred CccccccCCccccChHHHhc-CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCC--------------
Confidence 34456899999999999987 579999999999999999999999999999999999997643111
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCcc----CHHHHHhCCCCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQ----TATAALRSEFFTTKPY 409 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~----ta~elL~hp~f~~~~~ 409 (495)
...-++.++++||+++|..||++|. .+.++-+||||....|
T Consensus 245 --------------~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW 289 (357)
T KOG0598|consen 245 --------------PPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINW 289 (357)
T ss_pred --------------CCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCH
Confidence 1123678999999999999999995 6999999999998777
No 9
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-57 Score=435.84 Aligned_cols=290 Identities=37% Similarity=0.601 Sum_probs=249.4
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeec---cCCcee
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTS---RMSCSL 194 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~---~~~~~~ 194 (495)
..|..++.||.|+||.|..|.++.+|+.||||+|..........+...||+++|+.++|+||+.+.+++.. ..-..+
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 56777899999999999999999999999999998544456677888899999999999999999999865 234679
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC-C
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN-H 273 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~-~ 273 (495)
|+|+|+|+.+|...+... ..+++.++..+++||+.||.|+|+.||+||||||.|||++.+..+||+|||+|+..+.. .
T Consensus 102 YiV~elMetDL~~iik~~-~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~ 180 (359)
T KOG0660|consen 102 YLVFELMETDLHQIIKSQ-QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFE 180 (359)
T ss_pred EEehhHHhhHHHHHHHcC-ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCc
Confidence 999999998888776654 35999999999999999999999999999999999999999999999999999987542 2
Q ss_pred CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
...++..+.|.||+|||++.....|+.++||||+||||.||++|+|.|+|.+..+++..|+..+|+|+++.+.......+
T Consensus 181 ~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~a 260 (359)
T KOG0660|consen 181 DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKA 260 (359)
T ss_pred ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHH
Confidence 34568889999999999998888999999999999999999999999999999999999999999999887765442222
Q ss_pred ccCC--CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCC
Q 011041 354 TIFK--PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKP 408 (495)
Q Consensus 354 ~~~~--~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~ 408 (495)
..+. -...-+......++..++.++|||++||..||.+|+|++|+|+||||....
T Consensus 261 r~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~h 317 (359)
T KOG0660|consen 261 RPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYH 317 (359)
T ss_pred HHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhc
Confidence 2111 011112335677888999999999999999999999999999999998643
No 10
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.4e-57 Score=433.96 Aligned_cols=292 Identities=40% Similarity=0.729 Sum_probs=252.5
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCC-eeeeeceeeccC----C
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPN-VVKLEGLVTSRM----S 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~----~ 191 (495)
...|+.+++||+|+||+||+|+++.+|+.||+|+++.+...........+|+.+|+.|+|+| ||+|++++.... .
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 46788999999999999999999999999999999876543223455679999999999999 999999997632 2
Q ss_pred ceeEEEEeeccCChhhhhhCCC---CCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccc
Q 011041 192 CSLYLVFKYMEHDLAGLAASPT---IKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASF 268 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~~---~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~ 268 (495)
..+|+||||++.++...+.... ..++...++.+++||+.||+|||+++|+||||||.||||+.+|.+||+|||+|+.
T Consensus 90 ~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra 169 (323)
T KOG0594|consen 90 GKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA 169 (323)
T ss_pred ceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence 3799999999999988877654 4578899999999999999999999999999999999999999999999999997
Q ss_pred cCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhC
Q 011041 269 FDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 269 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 348 (495)
+.-.. ..+++.++|.||+|||+++|...|+..+||||+|||++||++++++|+|.++.+++.+|++.+|.|.++.|+..
T Consensus 170 ~~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v 248 (323)
T KOG0594|consen 170 FSIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGV 248 (323)
T ss_pred hcCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCc
Confidence 75332 34678899999999999999989999999999999999999999999999999999999999999999999874
Q ss_pred -CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCC
Q 011041 349 -KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPY 409 (495)
Q Consensus 349 -~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~ 409 (495)
.++......+...-.+.+....+...+++.+|+.+||++||.+|.||+.+|.||||...+.
T Consensus 249 ~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 249 SSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred cccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence 3444443323222234456666777789999999999999999999999999999997644
No 11
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=8e-56 Score=443.23 Aligned_cols=263 Identities=32% Similarity=0.485 Sum_probs=235.1
Q ss_pred CCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCc
Q 011041 115 RRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 115 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 192 (495)
+...+|.+++.||+|+|++||+|+++.+++.||||++.+..+ ....+..+.+|-.+|.+| +||.|++|+-.|.+ ..
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD--~~ 147 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD--EE 147 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeec--cc
Confidence 456899999999999999999999999999999999987765 344466788999999999 89999999888887 66
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.+|+|+||+++|.+..++...+.|+|..++.|+.||+.||+|||++|||||||||||||||.|+++||+|||.|..+.+.
T Consensus 148 sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 148 SLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred ceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 89999999998777667777789999999999999999999999999999999999999999999999999999988643
Q ss_pred CCC------------CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Q 011041 273 HKQ------------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSP 340 (495)
Q Consensus 273 ~~~------------~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~ 340 (495)
... ...++|||..|++||+|.. ...++.+|||+||||||.|+.|.|||.+.++.-++++|+.+...+
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~f 306 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLND-SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEF 306 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcC-CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccC
Confidence 221 1256899999999998876 567999999999999999999999999999999999999875444
Q ss_pred ChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCC
Q 011041 341 SEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPY 409 (495)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~ 409 (495)
+ ++||+.+.|||+++|..||.+|+|+.||.+||||.+..|
T Consensus 307 p-----------------------------~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw 346 (604)
T KOG0592|consen 307 P-----------------------------EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDW 346 (604)
T ss_pred C-----------------------------CCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCCh
Confidence 3 468899999999999999999999999999999998766
No 12
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-58 Score=419.38 Aligned_cols=286 Identities=26% Similarity=0.395 Sum_probs=246.1
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
..+.|++.+.||+|.|+.||+|.+..||+.+|+|+|....+.....+.+.+|+.|.+.|+|||||+|++.+.+ ..+.|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~--~~~~y 86 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE--ESFHY 86 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcc--cceeE
Confidence 3578999999999999999999999999999999999888877788999999999999999999999999877 67899
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC---CCcEEEeecccccccCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN---EGILTIADFGLASFFDPN 272 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~---~~~vkL~DFG~a~~~~~~ 272 (495)
||||+|.|+.+..-+-.+..++|..+..+++||+++|.|||.+||||||+||+|+|+.. ..-|||+|||+|....
T Consensus 87 lvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-- 164 (355)
T KOG0033|consen 87 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-- 164 (355)
T ss_pred EEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC--
Confidence 99999998765544433467899999999999999999999999999999999999954 3469999999998876
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
.......++|||.|||||++.. .+|+..+|||+.|||||.||.|.+||++.+...+++.|.......+..+|+
T Consensus 165 ~g~~~~G~~GtP~fmaPEvvrk-dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~------ 237 (355)
T KOG0033|consen 165 DGEAWHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWD------ 237 (355)
T ss_pred CccccccccCCCcccCHHHhhc-CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccC------
Confidence 4456778899999999998875 679999999999999999999999999999999999999877777766664
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCCCCCCCCCCCCCCChhHhhhcCHH
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPYACDPSSLPKYPPTKEMDAKLRDE 432 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 432 (495)
.+++++++||++||..||++|+|+.|+|+|||+.+.... .......+.-..+++-
T Consensus 238 -------------------~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~------As~~H~~dtvd~lrkf 292 (355)
T KOG0033|consen 238 -------------------TVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRERV------ASAIHRQDTVDCLKKF 292 (355)
T ss_pred -------------------cCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchHHH------HHHhhhHHHHHHHHHh
Confidence 588999999999999999999999999999999864221 1112233444555655
Q ss_pred HHHHH
Q 011041 433 EARRL 437 (495)
Q Consensus 433 ~~~~~ 437 (495)
.++|.
T Consensus 293 NarRK 297 (355)
T KOG0033|consen 293 NARRK 297 (355)
T ss_pred hHHHH
Confidence 55543
No 13
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2e-55 Score=440.81 Aligned_cols=275 Identities=32% Similarity=0.442 Sum_probs=235.7
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
..++|++++.||+|+||.||+|+.+.||..||+|++++..+ ..++++.+..|-.||...++|+||+|+..|.+ ..++
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD--~~~L 216 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD--KEYL 216 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC--CCee
Confidence 46999999999999999999999999999999999998876 67778899999999999999999999999988 6789
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC--
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN-- 272 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~-- 272 (495)
||||||++||...-++.....|+|..++.|+.+++.|++.||+.|||||||||+|+|||..|++||+||||+.-+...
T Consensus 217 YLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~ 296 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHR 296 (550)
T ss_pred EEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhh
Confidence 999999999877777777779999999999999999999999999999999999999999999999999998543210
Q ss_pred --------------------CC------------------------CCCccccccCCCCCcccccCCCCCCchhhHHHHH
Q 011041 273 --------------------HK------------------------QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAG 308 (495)
Q Consensus 273 --------------------~~------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlG 308 (495)
.. ....+.+|||.|+|||++++ ..|+..+|+||||
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 297 IESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDWWSLG 375 (550)
T ss_pred hhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc-CCCCccccHHHHH
Confidence 00 01125699999999999998 4699999999999
Q ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCC
Q 011041 309 CILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAID 388 (495)
Q Consensus 309 vil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~d 388 (495)
||+||||.|.|||.+.++.+++.+|+..... ...| .-..+++++.|||.+||+ |
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~--------l~fP-----------------~~~~~s~eA~DLI~rll~-d 429 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQETYRKIVNWRET--------LKFP-----------------EEVDLSDEAKDLITRLLC-D 429 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh--------ccCC-----------------CcCcccHHHHHHHHHHhc-C
Confidence 9999999999999999999999999763211 0111 113467899999999999 9
Q ss_pred CCCccC---HHHHHhCCCCCCCCCCCCCCCCCCC
Q 011041 389 PAERQT---ATAALRSEFFTTKPYACDPSSLPKY 419 (495)
Q Consensus 389 P~~R~t---a~elL~hp~f~~~~~~~~~~~~p~~ 419 (495)
|.+|+. ++||.+||||++..|.--....|.+
T Consensus 430 ~~~RLG~~G~~EIK~HPfF~~v~W~~l~~~~apf 463 (550)
T KOG0605|consen 430 PENRLGSKGAEEIKKHPFFKGVDWDHLREMPAPF 463 (550)
T ss_pred HHHhcCcccHHHHhcCCccccCCcchhhcCCCCC
Confidence 999975 9999999999998885433333333
No 14
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-55 Score=412.06 Aligned_cols=260 Identities=24% Similarity=0.408 Sum_probs=236.3
Q ss_pred CCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 115 RRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 115 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
...++|++++.||.|+||.|.+++++.+|..||+|++.+... ...+++...+|..+|+.+.||+++++++.+.+ ...
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d--~~~ 118 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD--NSN 118 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc--CCe
Confidence 346899999999999999999999999999999999988765 56677889999999999999999999988877 678
Q ss_pred eEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 011041 194 LYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH 273 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~ 273 (495)
+||||||++|+.+..++...++|+|..++.|+.||+.||+|||+++|++|||||||||||.+|.+||+|||+|+.....
T Consensus 119 lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r- 197 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR- 197 (355)
T ss_pred EEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc-
Confidence 9999999999999888888889999999999999999999999999999999999999999999999999999987543
Q ss_pred CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
..+.||||.|+|||++.. ++|+.++|+|+|||++|||++|.+||...+...+.++|+...-.++
T Consensus 198 ---T~TlCGTPeYLAPEii~s-k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP------------ 261 (355)
T KOG0616|consen 198 ---TWTLCGTPEYLAPEIIQS-KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFP------------ 261 (355)
T ss_pred ---EEEecCCccccChHHhhc-CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCC------------
Confidence 467899999999998876 6899999999999999999999999999999999999987433222
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCc-----cCHHHHHhCCCCCCCCCC
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAER-----QTATAALRSEFFTTKPYA 410 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R-----~ta~elL~hp~f~~~~~~ 410 (495)
.-+++++++||+++|+.|-.+| ....++..||||++..|.
T Consensus 262 -----------------~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~ 306 (355)
T KOG0616|consen 262 -----------------SYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWE 306 (355)
T ss_pred -----------------cccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHH
Confidence 3578999999999999999999 357899999999987773
No 15
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-55 Score=424.57 Aligned_cols=260 Identities=28% Similarity=0.433 Sum_probs=225.3
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++.+.++.||+|..|+||+|+|+.|++.+|+|+|. ...+....+++.+|++|++..+|||||.+||.|.+... .++|
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~-~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~-~isI 155 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVIL-LNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE-EISI 155 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeec-ccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc-eEEe
Confidence 467888999999999999999999999999999994 34567778899999999999999999999999998433 6999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+||||+++.+..+....+.++|.....++.+|+.||.|||+ ++||||||||+||||+..|+|||||||.+..+...
T Consensus 156 ~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--- 232 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--- 232 (364)
T ss_pred ehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh---
Confidence 99999999888888777889999999999999999999995 99999999999999999999999999999877543
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGR--TEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~--~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
...+.+||..|||||.+.+ ..|+.++||||||++++|+++|+-||... +....+..+..++..+++.
T Consensus 233 ~a~tfvGT~~YMsPERi~g-~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~---------- 301 (364)
T KOG0581|consen 233 IANTFVGTSAYMSPERISG-ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPR---------- 301 (364)
T ss_pred hcccccccccccChhhhcC-CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCC----------
Confidence 4578899999999999988 57999999999999999999999999874 2223333333333333321
Q ss_pred ccCCCCcccccccccccC-CCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 354 TIFKPQQSYKRCIAETFK-DFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~-~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
... .+|+++.+||..||++||.+|+|+.|+|+|||++..
T Consensus 302 ---------------lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~ 341 (364)
T KOG0581|consen 302 ---------------LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKF 341 (364)
T ss_pred ---------------CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhc
Confidence 112 489999999999999999999999999999999864
No 16
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-55 Score=422.24 Aligned_cols=281 Identities=37% Similarity=0.630 Sum_probs=241.6
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc---ee
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC---SL 194 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~---~~ 194 (495)
-.|...+++|.|+||.||+|+...+++.||||++..+.. .-.+|+.||+.++|||||+|.-+|....+. ++
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 458888999999999999999999999999999876542 233799999999999999999888664444 56
Q ss_pred EEEEeeccCChhhhhhC---CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC-CcEEEeecccccccC
Q 011041 195 YLVFKYMEHDLAGLAAS---PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE-GILTIADFGLASFFD 270 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~---~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~-~~vkL~DFG~a~~~~ 270 (495)
.+|||||+..+...+.. .+..++.-.++-|+.||++||.|||+.||+||||||.|||||.+ |.+||||||.|+...
T Consensus 98 nlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 98 NLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV 177 (364)
T ss_pred HHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence 78999999988876653 46689999999999999999999999999999999999999986 999999999999886
Q ss_pred CCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 271 PNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 271 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
.+ ++..++..|..|+|||++.|...|+.+.||||.||++.||+-|+|.|.|.+..+++..|.+.+|.|+.+....++.
T Consensus 178 ~~--epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~ 255 (364)
T KOG0658|consen 178 KG--EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNP 255 (364)
T ss_pred cC--CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCc
Confidence 55 4457788999999999999999999999999999999999999999999999999999999999999988776654
Q ss_pred CCCccCCCCccccccccc-ccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 351 PHATIFKPQQSYKRCIAE-TFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
.....-.++ -....+.+ .....++++.+|+.++|.++|.+|.++.|+|.||||...
T Consensus 256 ~y~~~~~p~-ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdel 312 (364)
T KOG0658|consen 256 NYTEFKFPQ-IKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDEL 312 (364)
T ss_pred ccccccCcc-cccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHh
Confidence 433222222 11222223 567789999999999999999999999999999999853
No 17
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-54 Score=418.85 Aligned_cols=265 Identities=29% Similarity=0.465 Sum_probs=234.6
Q ss_pred CCCCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc
Q 011041 113 TPRRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 113 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 192 (495)
.....++|.+.+.||.|+||+||+|+++.++..||||.|.+..+.....+.+..||.||+.|+|||||+++++++. ++
T Consensus 5 ~~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~--~~ 82 (429)
T KOG0595|consen 5 SMRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIED--DD 82 (429)
T ss_pred cccccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEec--CC
Confidence 3445789999999999999999999999999999999999998888899999999999999999999999999988 56
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC------CcEEEeecccc
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE------GILTIADFGLA 266 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~------~~vkL~DFG~a 266 (495)
++|||||||.|+.+..++...+.++|..++.++.||+.||++||+++||||||||+||||+.. -.+||+|||+|
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 899999999988888888888899999999999999999999999999999999999999875 45899999999
Q ss_pred cccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhh
Q 011041 267 SFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWK 346 (495)
Q Consensus 267 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 346 (495)
+.+.+. .-..+.||+|.|||||++.. ..|+.++|+||+|+|||+|++|++||...+..+.+..+.+.-...
T Consensus 163 R~L~~~--~~a~tlcGSplYMAPEV~~~-~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~------ 233 (429)
T KOG0595|consen 163 RFLQPG--SMAETLCGSPLYMAPEVIMS-QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIV------ 233 (429)
T ss_pred hhCCch--hHHHHhhCCccccCHHHHHh-ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccccc------
Confidence 998754 34567899999999999864 679999999999999999999999999999999988664422111
Q ss_pred hCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCC
Q 011041 347 KSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKP 408 (495)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~ 408 (495)
......++....+|+..+|+.||..|.+..+.+.|+++...|
T Consensus 234 --------------------~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 234 --------------------PVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred --------------------CchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 111223567778999999999999999999999999998765
No 18
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.7e-54 Score=437.42 Aligned_cols=262 Identities=27% Similarity=0.400 Sum_probs=235.7
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecC-CCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFD-NLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~-~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
.+-|++++.||.|+.|.|.+|++..||+.+|||+|.+. .........+.+||.||+.|.||||+++|++|++ ..++|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~--~~~ly 88 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN--KQHLY 88 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc--CceEE
Confidence 46689999999999999999999999999999999877 4555666789999999999999999999999998 56899
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+|.||+.+|.+++++-..+.|+|.+++++++||+.||.|||..+|+||||||||+|||..+++||+|||+|....++ .
T Consensus 89 lvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g--k 166 (786)
T KOG0588|consen 89 LVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG--K 166 (786)
T ss_pred EEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCC--c
Confidence 99999999888888877889999999999999999999999999999999999999999999999999999876544 4
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
...+.||+|.|.+||++.|..+.|.++||||+|||||.||+|+.||.+.|-...+.++.+...
T Consensus 167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f----------------- 229 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF----------------- 229 (786)
T ss_pred cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc-----------------
Confidence 567789999999999999988889999999999999999999999998888888888765322
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPYAC 411 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~~~ 411 (495)
+....+|+++++||.+||.+||++|+|.+|+++|||+....-..
T Consensus 230 ------------~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~ 273 (786)
T KOG0588|consen 230 ------------EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLP 273 (786)
T ss_pred ------------cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCC
Confidence 22346899999999999999999999999999999998754433
No 19
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-52 Score=425.57 Aligned_cols=259 Identities=28% Similarity=0.439 Sum_probs=224.9
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCC---hHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCC
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLE---PESVRFMAREILILRRLD-HPNVVKLEGLVTSRMS 191 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~---~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~ 191 (495)
..+.|.+.+.||+|+||.|+.|++..+|..||+|++.+.... ....+.+.+|+.+++.++ ||||+++++++...
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~-- 92 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP-- 92 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC--
Confidence 457899999999999999999999999999999988765221 134567779999999998 99999999999884
Q ss_pred ceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC-CcEEEeecccccccC
Q 011041 192 CSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE-GILTIADFGLASFFD 270 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~-~~vkL~DFG~a~~~~ 270 (495)
..+|+||||+.++.+...+...+++.|.+++.+|+||+.||+|||++||+||||||||||++.+ +++||+|||++....
T Consensus 93 ~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 93 TKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred CeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 4599999999985444444447899999999999999999999999999999999999999999 999999999999874
Q ss_pred CCCCCCCccccccCCCCCcccccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 271 PNHKQPMTSRVVTLWYRPPELLLGAT-DYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 271 ~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
.......+.+||+.|+|||++.+.. +-+.++|||||||+||.|++|..||...+....+.+|.+.....
T Consensus 173 -~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~--------- 242 (370)
T KOG0583|consen 173 -GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKI--------- 242 (370)
T ss_pred -CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccC---------
Confidence 3335668889999999999998866 44689999999999999999999999988888888875532211
Q ss_pred CCCCccCCCCcccccccccccCCC-CCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDF-PPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
...+ ++++.+||.+||..||.+|+|+.+++.||||+.
T Consensus 243 --------------------p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 243 --------------------PSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred --------------------CCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 1234 889999999999999999999999999999997
No 20
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-53 Score=371.18 Aligned_cols=286 Identities=40% Similarity=0.710 Sum_probs=251.3
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
.+|...++||+|.||+||+|+++++++.||+|.++.+.-+........+||-+|+.|+|.|||+++++... +..+-+|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhs--dkkltlv 79 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS--DKKLTLV 79 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhcc--CceeEEe
Confidence 46888899999999999999999999999999999876555555567799999999999999999999877 5679999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
||||..++......-++.++.+.++.++.|++.||.|||++++.||||||.|+||+.+|.+||+|||+++.++-.- ..+
T Consensus 80 fe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipv-rcy 158 (292)
T KOG0662|consen 80 FEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-RCY 158 (292)
T ss_pred HHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCce-Eee
Confidence 9999999999888888899999999999999999999999999999999999999999999999999999876443 344
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhC-CCCCCcc
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKS-KLPHATI 355 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~-~~~~~~~ 355 (495)
+..+.|.||++|.++.|.+-|+...|+||.|||+.|+.. |.|+|+|.+..+++.+|++.+|.|.++.|+.. ++|....
T Consensus 159 saevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~ 238 (292)
T KOG0662|consen 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKP 238 (292)
T ss_pred eceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcc
Confidence 566889999999999999999999999999999999985 99999999999999999999999999999873 4443322
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
+..- +....++.+.+.+.....||+.++|..+|..|++|+++|+||||+..
T Consensus 239 yp~y-pattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 239 YPIY-PATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred cCCc-cccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 2111 11123556677788889999999999999999999999999999863
No 21
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-54 Score=400.43 Aligned_cols=250 Identities=29% Similarity=0.491 Sum_probs=217.5
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
..+|+++++||+|+||.||++++..+|..||+|.|..+..+....+.+..|+.+|++|+|||||++++.-..+....++|
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 46899999999999999999999999999999999988888888899999999999999999999998433333556999
Q ss_pred EEeeccCChhhhhh----CCCCCCCHHHHHHHHHHHHHHHHHhhh--CC--ceeccCCCCCeeeCCCCcEEEeecccccc
Q 011041 197 VFKYMEHDLAGLAA----SPTIKFTQAQVKCYMHQLLSGLEHCHN--QH--VLHRDIKGSNLLIDNEGILTIADFGLASF 268 (495)
Q Consensus 197 v~e~~~~~l~~~~~----~~~~~l~e~~~~~i~~qil~~L~~LH~--~g--ivHrDlKp~NILl~~~~~vkL~DFG~a~~ 268 (495)
|||||+++.+..++ .....++|..++.++.|++.||.+||+ .. |+||||||.||||+.+|.|||+|||++++
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 99999976655443 456679999999999999999999998 55 99999999999999999999999999998
Q ss_pred cCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhC
Q 011041 269 FDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 269 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 348 (495)
+.... ....+.+|||+||+||++.+ .+|+.++|||||||++|||+.-.+||.|.+-.+...+|.+.-..|-++
T Consensus 178 l~s~~-tfA~S~VGTPyYMSPE~i~~-~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~----- 250 (375)
T KOG0591|consen 178 LSSKT-TFAHSLVGTPYYMSPERIHE-SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPD----- 250 (375)
T ss_pred hcchh-HHHHhhcCCCcccCHHHHhc-CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcH-----
Confidence 87543 44567899999999999887 679999999999999999999999999998888888886542221110
Q ss_pred CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCH
Q 011041 349 KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTA 395 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta 395 (495)
..+|.++..||..|+..||..||+.
T Consensus 251 ----------------------~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 251 ----------------------EHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred ----------------------HHhhhHHHHHHHHHccCCcccCCCc
Confidence 2367788999999999999999986
No 22
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-53 Score=415.30 Aligned_cols=265 Identities=30% Similarity=0.448 Sum_probs=228.4
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCCh------------HHHHHHHHHHHHHHhCCCCCeeeee
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEP------------ESVRFMAREILILRRLDHPNVVKLE 183 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~------------~~~~~~~~Ei~il~~l~HpnIv~l~ 183 (495)
..++|++++.||+|.||.|.+|++..+++.||||++.+..+.. ...+.+.+||.||++|+|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 4689999999999999999999999999999999997653221 1246889999999999999999999
Q ss_pred ceeeccCCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeec
Q 011041 184 GLVTSRMSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADF 263 (495)
Q Consensus 184 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DF 263 (495)
++..+.....+|||+|||..+-....-.....+++.+++.|++.++.||+|||.+|||||||||+|+||+++|+|||+||
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDF 254 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDF 254 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeecc
Confidence 99999888999999999998766555544444999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCC----CCCCccccccCCCCCcccccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh
Q 011041 264 GLASFFDPNH----KQPMTSRVVTLWYRPPELLLG---ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKL 336 (495)
Q Consensus 264 G~a~~~~~~~----~~~~~~~~gt~~y~aPE~l~~---~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~ 336 (495)
|.+..+.... ...+...+|||.|+|||.+.+ ....+.+.|||||||+||.|+.|+.||.+....+.+.+|...
T Consensus 255 GVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~ 334 (576)
T KOG0585|consen 255 GVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVND 334 (576)
T ss_pred ceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcC
Confidence 9998763221 123345799999999999876 234578899999999999999999999999999999999764
Q ss_pred cCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 337 CGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
.-.++ ..+++.+.++|||.+||.+||.+|++..++..|||.+..
T Consensus 335 pL~fP---------------------------~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 335 PLEFP---------------------------ENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred cccCC---------------------------CcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 32222 123567889999999999999999999999999999864
No 23
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.9e-51 Score=406.02 Aligned_cols=283 Identities=39% Similarity=0.711 Sum_probs=236.0
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|++++.||.|+||.||+|++..++..||+|++...... .....+.+|+.+++.++||||+++++++.. ....|+
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l 80 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIHT--ERCLTL 80 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEcC--CCeEEE
Confidence 57899999999999999999999999999999999754322 223456789999999999999999999877 457999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+.+++...+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ..
T Consensus 81 v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-~~ 159 (288)
T cd07871 81 VFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-KT 159 (288)
T ss_pred EEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC-cc
Confidence 99999998877766555568999999999999999999999999999999999999999999999999997654322 22
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC--c
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA--T 354 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~--~ 354 (495)
.....+|+.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+....+.+..+.|+....... .
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRS 239 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhc
Confidence 34557899999999987766789999999999999999999999999999999999999999999998876332111 1
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
...+... ..........+++++++||.+||++||.+|+|++|+|+||||
T Consensus 240 ~~~~~~~-~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 240 YLFPQYR-AQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred cccCccC-CCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 1111110 111222345678899999999999999999999999999998
No 24
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=8.4e-52 Score=425.05 Aligned_cols=281 Identities=30% Similarity=0.537 Sum_probs=230.3
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-C-----CCeeeeeceeeccCC
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLD-H-----PNVVKLEGLVTSRMS 191 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-H-----pnIv~l~~~~~~~~~ 191 (495)
.+|.+++.||+|+||+|.+|.|..|++.||||+|+.. .........|+.||..|+ | -|||+++++|.. .
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f--r 260 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF--R 260 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc--c
Confidence 4789999999999999999999999999999999754 455566778999999996 3 499999999998 5
Q ss_pred ceeEEEEeeccCChhhhhhCCC-CCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC--cEEEeecccccc
Q 011041 192 CSLYLVFKYMEHDLAGLAASPT-IKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG--ILTIADFGLASF 268 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~~-~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~--~vkL~DFG~a~~ 268 (495)
+++|||+|.++.+|..++.... ..|+...++.++.||+.||.+||+.||||+|||||||||.+.+ .|||+|||.++.
T Consensus 261 ~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 261 NHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred cceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccc
Confidence 6899999999999998887643 4599999999999999999999999999999999999997644 799999999987
Q ss_pred cCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhC
Q 011041 269 FDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 269 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 348 (495)
... ...+++.+..|+|||+++| .+|+.+.||||||||++||++|.|+|+|.++.+++..|+..+|.|+..+++..
T Consensus 341 ~~q----~vytYiQSRfYRAPEVILG-lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~ 415 (586)
T KOG0667|consen 341 ESQ----RVYTYIQSRFYRAPEVILG-LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTA 415 (586)
T ss_pred cCC----cceeeeeccccccchhhcc-CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 642 2337788999999999998 67999999999999999999999999999999999999999999998766543
Q ss_pred CCCCCccCCCCccccc-c---------------------------------cccccC-CCCCCcHHHHHHhccCCCCCcc
Q 011041 349 KLPHATIFKPQQSYKR-C---------------------------------IAETFK-DFPPSSLPLIETLLAIDPAERQ 393 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~-~---------------------------------~~~~~~-~~s~~~~~Li~~~L~~dP~~R~ 393 (495)
.-... +|.....+.+ + +...+. .-...+.|||.+||.+||.+|+
T Consensus 416 ~~~~k-ff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~ 494 (586)
T KOG0667|consen 416 KKAHK-FFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI 494 (586)
T ss_pred cccce-ehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence 21110 0100000000 0 000000 0113468999999999999999
Q ss_pred CHHHHHhCCCCCCCCC
Q 011041 394 TATAALRSEFFTTKPY 409 (495)
Q Consensus 394 ta~elL~hp~f~~~~~ 409 (495)
|+.++|+||||+....
T Consensus 495 tp~qal~Hpfl~~~~~ 510 (586)
T KOG0667|consen 495 TPAQALNHPFLTGTSL 510 (586)
T ss_pred CHHHHhcCcccccccc
Confidence 9999999999996433
No 25
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-51 Score=400.13 Aligned_cols=275 Identities=25% Similarity=0.325 Sum_probs=235.6
Q ss_pred CCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 115 RRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 115 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
...+.|++++.||.|.-|+||+|..+.++..+|+|++.+..+ ......+.+.|.+||+.++||.+++||..|+. +.+
T Consensus 74 l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet--~~~ 151 (459)
T KOG0610|consen 74 LGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFET--DKY 151 (459)
T ss_pred cCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeec--cce
Confidence 346889999999999999999999999999999999998876 35566778889999999999999999999988 678
Q ss_pred eEEEEeeccCChhhhhh--CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 194 LYLVFKYMEHDLAGLAA--SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~--~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
.|++||||.|+.+..+. +....|++..++.|+.+++.||+|||.+|||+||||||||||.++|+|.|+||.|+.....
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 99999999987666544 4567899999999999999999999999999999999999999999999999999844311
Q ss_pred ---------------------------------C-C---------------------CCCCccccccCCCCCcccccCCC
Q 011041 272 ---------------------------------N-H---------------------KQPMTSRVVTLWYRPPELLLGAT 296 (495)
Q Consensus 272 ---------------------------------~-~---------------------~~~~~~~~gt~~y~aPE~l~~~~ 296 (495)
. . .....+.|||-.|+|||++.|.
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~- 310 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE- 310 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecC-
Confidence 0 0 0112356899999999999984
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCC
Q 011041 297 DYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPS 376 (495)
Q Consensus 297 ~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 376 (495)
..+.++|||+|||+|||||.|..||.|.+..+.+.+|+...-.++. ...++..
T Consensus 311 GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~---------------------------~~~vs~~ 363 (459)
T KOG0610|consen 311 GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPE---------------------------EPEVSSA 363 (459)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCC---------------------------CCcchhH
Confidence 5699999999999999999999999999999999998753222221 1246788
Q ss_pred cHHHHHHhccCCCCCccC----HHHHHhCCCCCCCCCCCCCCCCCCC
Q 011041 377 SLPLIETLLAIDPAERQT----ATAALRSEFFTTKPYACDPSSLPKY 419 (495)
Q Consensus 377 ~~~Li~~~L~~dP~~R~t----a~elL~hp~f~~~~~~~~~~~~p~~ 419 (495)
++|||+++|.+||.+|+. |.||-+||||.+..|+.-....|.+
T Consensus 364 akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~ 410 (459)
T KOG0610|consen 364 AKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPE 410 (459)
T ss_pred HHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheeccCCCc
Confidence 999999999999999999 9999999999999998665555544
No 26
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-51 Score=423.41 Aligned_cols=262 Identities=25% Similarity=0.386 Sum_probs=232.6
Q ss_pred CCCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCC
Q 011041 114 PRRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLD-HPNVVKLEGLVTSRMS 191 (495)
Q Consensus 114 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~ 191 (495)
....++|.++++||+|+||+|+++..+.+++.||||+++++.. ..+.++....|.+|+.... ||.++.|+..|.. .
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT--~ 441 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT--K 441 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc--C
Confidence 4457999999999999999999999999999999999999876 6778889999999999885 9999999999988 5
Q ss_pred ceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 192 CSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
.++|+||||+.|+. ...++....|+|..++.|+..|+.||+|||++||||||||.+|||||.+|++||+|||+++..-.
T Consensus 442 ~~l~fvmey~~Ggd-m~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~ 520 (694)
T KOG0694|consen 442 EHLFFVMEYVAGGD-LMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG 520 (694)
T ss_pred CeEEEEEEecCCCc-EEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCC
Confidence 78999999999988 34445556899999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 272 NHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 272 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
. ....++.||||.|||||++.+ ..|+.++|+|+|||+|||||.|.+||.|+++++++..|+..--
T Consensus 521 ~-g~~TsTfCGTpey~aPEil~e-~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~------------- 585 (694)
T KOG0694|consen 521 Q-GDRTSTFCGTPEFLAPEVLTE-QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEV------------- 585 (694)
T ss_pred C-CCccccccCChhhcChhhhcc-CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCC-------------
Confidence 2 234578899999999999987 6799999999999999999999999999999999999975211
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC-----HHHHHhCCCCCCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT-----ATAALRSEFFTTKPY 409 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----a~elL~hp~f~~~~~ 409 (495)
.....+|.++.+++++||+.||++|+. +.++.+||||....|
T Consensus 586 ----------------~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w 632 (694)
T KOG0694|consen 586 ----------------RYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDW 632 (694)
T ss_pred ----------------CCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCH
Confidence 112347889999999999999999976 588999999998776
No 27
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-51 Score=413.16 Aligned_cols=264 Identities=33% Similarity=0.481 Sum_probs=234.1
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCCce
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLD-HPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~ 193 (495)
....|++.+.||+|.||+||+|+++.||+.||+|+|.+... .......+.+|+.||++|. |||||.++++|++ ...
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~--~~~ 110 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED--PDS 110 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc--CCe
Confidence 35789999999999999999999999999999999988765 3335678899999999998 9999999999998 558
Q ss_pred eEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC----CcEEEeeccccccc
Q 011041 194 LYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE----GILTIADFGLASFF 269 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~----~~vkL~DFG~a~~~ 269 (495)
+|+|||++.|+.+.+.+... .++|..+..+++||+.++.|||+.||+||||||||||+... +.+|++|||++...
T Consensus 111 ~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~ 189 (382)
T KOG0032|consen 111 VYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI 189 (382)
T ss_pred EEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence 99999999987766655444 49999999999999999999999999999999999999643 57999999999988
Q ss_pred CCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 270 DPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 270 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
.. .......+||+.|+|||++.+ ..|+..+||||+||++|.|++|.+||.+.++.+.+.+|...-..+..++|
T Consensus 190 ~~--~~~~~~~~Gtp~y~APEvl~~-~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w---- 262 (382)
T KOG0032|consen 190 KP--GERLHTIVGTPEYVAPEVLGG-RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPW---- 262 (382)
T ss_pred cC--CceEeeecCCccccCchhhcC-CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCc----
Confidence 76 355678899999999999875 57999999999999999999999999999999999988876665665555
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCCC
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPYA 410 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~~ 410 (495)
.+++..+.+||+.||..||.+|+|+.++|+|||++.....
T Consensus 263 ---------------------~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~ 302 (382)
T KOG0032|consen 263 ---------------------DDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEA 302 (382)
T ss_pred ---------------------cccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCccc
Confidence 4588999999999999999999999999999999875443
No 28
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.8e-52 Score=416.92 Aligned_cols=257 Identities=33% Similarity=0.494 Sum_probs=229.8
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|.+.+.||+|+||.||+|+.+.+.+.||||.+.+........+.+.+|++|++.|+|||||.++++|+. ...+|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt--~~~~~vV 79 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFET--SAHLWVV 79 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcc--cceEEEE
Confidence 67999999999999999999999999999999999988888888999999999999999999999999998 6789999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
.||+.|+|...+ ...+.++|+.++.++.+++.||.|||+++|+|||+||.|||++..|.+|+||||+|+.+..+. ...
T Consensus 80 te~a~g~L~~il-~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t-~vl 157 (808)
T KOG0597|consen 80 TEYAVGDLFTIL-EQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT-SVL 157 (808)
T ss_pred ehhhhhhHHHHH-HhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCc-eee
Confidence 999999666554 445689999999999999999999999999999999999999999999999999999876543 456
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFK 357 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 357 (495)
+...|||.|||||++.+ ..|+..+|+||||||+|||++|+|||....-......|....-.+
T Consensus 158 tsikGtPlYmAPElv~e-~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~----------------- 219 (808)
T KOG0597|consen 158 TSIKGTPLYMAPELVEE-QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKP----------------- 219 (808)
T ss_pred eeccCcccccCHHHHcC-CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCC-----------------
Confidence 77889999999998875 789999999999999999999999999888777777775422111
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKP 408 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~ 408 (495)
....+..+.+||+.+|.+||.+|+|-.++|.|||++.+-
T Consensus 220 ------------p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~ 258 (808)
T KOG0597|consen 220 ------------PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKI 258 (808)
T ss_pred ------------cccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence 124678899999999999999999999999999998753
No 29
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.5e-50 Score=398.28 Aligned_cols=284 Identities=34% Similarity=0.567 Sum_probs=234.0
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|++.+.||+|+||.||+|+++.+++.||+|++............+.+|+.+++.++||||+++++++.. +..+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR--RGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec--CCEEEEE
Confidence 47999999999999999999999999999999998665444556678899999999999999999999977 5689999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
|||+.++++..+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 99999998887766566799999999999999999999999999999999999999999999999999987654333334
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC---c
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA---T 354 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~---~ 354 (495)
....||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+....+..+...+........ .
T Consensus 159 ~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07848 159 TEYVATRWYRSPELLLG-APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL 237 (287)
T ss_pred cccccccccCCcHHHcC-CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccc
Confidence 45678999999999876 4589999999999999999999999999998888888888888777665542111000 0
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.+................+|+++.+||.+||++||.+|||++++|+||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00000000111122234578889999999999999999999999999998
No 30
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=5.4e-52 Score=390.10 Aligned_cols=293 Identities=38% Similarity=0.648 Sum_probs=239.4
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCe----EEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQ----IVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~----~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 192 (495)
...|+++..||+|+||.||+|..++++. .||||++.-..-.........||+.+++.|+||||+.|..+|... +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH-DK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc-Cc
Confidence 4679999999999999999997665543 789999976522112223455899999999999999999998764 67
Q ss_pred eeEEEEeeccCChhhhhhC----CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC----CcEEEeecc
Q 011041 193 SLYLVFKYMEHDLAGLAAS----PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE----GILTIADFG 264 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~----~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~----~~vkL~DFG 264 (495)
.++|++||.+++|+..+.. ....++...++.++.||+.|+.|||++-|+||||||.||||..+ |.|||+|||
T Consensus 102 ~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 102 KVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred eEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence 8999999999999886542 33578999999999999999999999999999999999999888 899999999
Q ss_pred cccccCCCCCC--CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---------hHHHHHHH
Q 011041 265 LASFFDPNHKQ--PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRT---------EVEQLHKI 333 (495)
Q Consensus 265 ~a~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~---------~~~~~~~i 333 (495)
+++.+...-.. .....+.|.||+|||+++|...|+.++|||++|||+.||++-.|+|.+.. ..+++.+|
T Consensus 182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI 261 (438)
T KOG0666|consen 182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI 261 (438)
T ss_pred HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence 99988644321 23456889999999999999999999999999999999999999998753 46889999
Q ss_pred HHhcCCCChhhhhhC-CCCCCccCC---CCcccccc----cccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 334 FKLCGSPSEEYWKKS-KLPHATIFK---PQQSYKRC----IAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 334 ~~~~g~~~~~~~~~~-~~~~~~~~~---~~~~~~~~----~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
++++|.|.++.|+.. ++|+..... ....+..+ .-...+.-++.+.+|+.+||++||.+|+|++++|+|+||+
T Consensus 262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~ 341 (438)
T KOG0666|consen 262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFT 341 (438)
T ss_pred HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccc
Confidence 999999999999874 455542110 00111111 1122334567799999999999999999999999999999
Q ss_pred CCCCC
Q 011041 406 TKPYA 410 (495)
Q Consensus 406 ~~~~~ 410 (495)
..+.+
T Consensus 342 ~d~lp 346 (438)
T KOG0666|consen 342 EDPLP 346 (438)
T ss_pred cCCCC
Confidence 98665
No 31
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-52 Score=383.72 Aligned_cols=260 Identities=28% Similarity=0.438 Sum_probs=232.3
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC------ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccC
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL------EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRM 190 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~------~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~ 190 (495)
+.|.--+.||.|..++|.+|.++.+|..+|+|+|..... ..+..+...+|+.||+++ .||+|++++++|+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes-- 94 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES-- 94 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC--
Confidence 567777889999999999999999999999999975422 122344566899999998 79999999999998
Q ss_pred CceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccC
Q 011041 191 SCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFD 270 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~ 270 (495)
+..+++|||.|..+.+.+++.....++|.+.+.+|+||++|++|||.++||||||||||||++++.++||+|||+++.+.
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~ 174 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLE 174 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccC
Confidence 67899999999999888888888899999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCccccccCCCCCccccc-----CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhh
Q 011041 271 PNHKQPMTSRVVTLWYRPPELLL-----GATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYW 345 (495)
Q Consensus 271 ~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~ 345 (495)
++ ......||||+|+|||.+. +...|+..+|+|++|||+|-||.|.|||+.....-.+..|+.....+..+.|
T Consensus 175 ~G--ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speW 252 (411)
T KOG0599|consen 175 PG--EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEW 252 (411)
T ss_pred Cc--hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcch
Confidence 65 4567889999999999984 3456899999999999999999999999999888888999887777766666
Q ss_pred hhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 346 KKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.+++...+|||.+||+.||.+|.|++|+|+||||..
T Consensus 253 -------------------------adis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 253 -------------------------ADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred -------------------------hhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 458899999999999999999999999999999964
No 32
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.9e-50 Score=399.99 Aligned_cols=286 Identities=36% Similarity=0.662 Sum_probs=232.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|++++.||+|+||.||+|+++.+|+.||||++...... .....+.+|+.+++.++||||+++++++.+ ....|+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l 80 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHT--KETLTL 80 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEec--CCeEEE
Confidence 57899999999999999999999999999999999754322 223456789999999999999999999987 567999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+.+++...+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ..
T Consensus 81 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~ 159 (303)
T cd07869 81 VFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-HT 159 (303)
T ss_pred EEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC-cc
Confidence 99999999888777666679999999999999999999999999999999999999999999999999987543222 23
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRT-EVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~-~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
.....+|+.|+|||++.+...++.++|||||||++|+|++|.+||.+.. ..+.+..+....+.+....|....... .
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 237 (303)
T cd07869 160 YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP--H 237 (303)
T ss_pred CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc--c
Confidence 3456789999999998776678999999999999999999999999854 457778888888888887776532110 0
Q ss_pred CCCCcc---ccccccccc--CCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCC
Q 011041 356 FKPQQS---YKRCIAETF--KDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKP 408 (495)
Q Consensus 356 ~~~~~~---~~~~~~~~~--~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~ 408 (495)
+.+... ....+...+ ..+++++.+||.+||++||.+|+|+.|+|+||||+..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 238 FKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred cccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 100000 000011111 12467899999999999999999999999999998753
No 33
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-52 Score=382.75 Aligned_cols=294 Identities=45% Similarity=0.773 Sum_probs=248.5
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeec------cC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTS------RM 190 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~------~~ 190 (495)
.+.|+.+.+||+|.||.||+|+.+.+|+.||+|++..++-....-....+|+++|+.|.|+|++.+++++.. ..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 477889999999999999999999999999999887654333333456689999999999999999988743 22
Q ss_pred CceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccC
Q 011041 191 SCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFD 270 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~ 270 (495)
...+|+||.+|+++|.+++.....+|+..+++.++.+++.||.|+|.+.|+|||+|++|+||+.+|.+||+|||+++.+.
T Consensus 96 r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 96 RATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred cceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccccee
Confidence 34699999999999999998888899999999999999999999999999999999999999999999999999997664
Q ss_pred CCC---CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhh
Q 011041 271 PNH---KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKK 347 (495)
Q Consensus 271 ~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 347 (495)
... ...+++++.|.||++||.++|...|+++.|||..|||+.||+++.|.|.+.++..++..|-.+||+...+.|+.
T Consensus 176 ~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~ 255 (376)
T KOG0669|consen 176 TSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPN 255 (376)
T ss_pred cccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCC
Confidence 332 23367789999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred C-CCCCCccC--CC-CcccccccccccCCC--CCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCCC
Q 011041 348 S-KLPHATIF--KP-QQSYKRCIAETFKDF--PPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPYA 410 (495)
Q Consensus 348 ~-~~~~~~~~--~~-~~~~~~~~~~~~~~~--s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~~ 410 (495)
. ++|-.... .| ...-++.+....+-+ .+++.||++.||.+||.+|+++.++|.|.||..+|.+
T Consensus 256 ~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 256 VDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred cccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 3 34433222 11 111122233333322 5789999999999999999999999999999987655
No 34
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.7e-49 Score=416.12 Aligned_cols=284 Identities=31% Similarity=0.495 Sum_probs=228.9
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeecc------C
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSR------M 190 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------~ 190 (495)
..+|++++.||+|+||.||+|++..+++.||||++.... ....+|+.+|+.++|||||++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 467999999999999999999999999999999986432 2345799999999999999999877431 1
Q ss_pred CceeEEEEeeccCChhhhhh---CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC-cEEEeecccc
Q 011041 191 SCSLYLVFKYMEHDLAGLAA---SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG-ILTIADFGLA 266 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~---~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~-~vkL~DFG~a 266 (495)
...+++||||+++++...+. .....+++..++.++.||+.||.|||++||+||||||+||||+.++ .+||+|||++
T Consensus 139 ~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla 218 (440)
T PTZ00036 139 NIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSA 218 (440)
T ss_pred ceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccc
Confidence 23578999999988765443 3456799999999999999999999999999999999999999765 7999999999
Q ss_pred cccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhh
Q 011041 267 SFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWK 346 (495)
Q Consensus 267 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 346 (495)
..+.... .....+||+.|+|||++.+...|+.++|||||||+||||++|.+||.+.+..+.+.++...++.+..+.+.
T Consensus 219 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~ 296 (440)
T PTZ00036 219 KNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLK 296 (440)
T ss_pred hhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 8764332 23456789999999998876679999999999999999999999999999999999999999999877665
Q ss_pred hCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCC
Q 011041 347 KSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKP 408 (495)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~ 408 (495)
...........+...............|+++.+||.+||++||.+|+|+.|+|+||||....
T Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 297 EMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred HhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 43221111111111111111112234678899999999999999999999999999998643
No 35
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=4.4e-49 Score=394.05 Aligned_cols=304 Identities=46% Similarity=0.803 Sum_probs=251.7
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
..++|++.+.||+|+||.||+|++..+|+.||+|++............+.+|+.+++.++|+||+++++++.......+|
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 35789999999999999999999999999999999976543333333456799999999999999999998765456789
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+||||+++++...+......+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....... .
T Consensus 85 lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~-~ 163 (309)
T cd07845 85 LVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA-K 163 (309)
T ss_pred EEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc-C
Confidence 999999998777766555679999999999999999999999999999999999999999999999999998765332 2
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC-CCCCc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK-LPHAT 354 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~-~~~~~ 354 (495)
......+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+...++.+....|+... ++...
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (309)
T cd07845 164 PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVG 243 (309)
T ss_pred CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccc
Confidence 23344568899999998776678999999999999999999999999999999999999999998888876532 22222
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCCCCCCCCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPYACDPSSLPKYP 420 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~~~~~~~~p~~~ 420 (495)
.+.........+...+..+++++.+||.+||++||.+|||+.++|+||||...+.++.+..+|.+|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~~~~~~~~~~ 309 (309)
T cd07845 244 KFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCEPEMMPTFP 309 (309)
T ss_pred cccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCCCCCcCCCCC
Confidence 221111111123334455688999999999999999999999999999999999999888777654
No 36
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-50 Score=396.28 Aligned_cols=261 Identities=29% Similarity=0.440 Sum_probs=213.8
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
.+|..++.||+|+||.||++.+..+|..+|+|.+...... ..+.+.+|+.+|.+|+|||||+++|.........++|+
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence 5688889999999999999999999999999999876322 26778999999999999999999997554322379999
Q ss_pred EeeccCChhhhhhCCCC-CCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC-CCcEEEeecccccccCC--CC
Q 011041 198 FKYMEHDLAGLAASPTI-KFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN-EGILTIADFGLASFFDP--NH 273 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~-~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~-~~~vkL~DFG~a~~~~~--~~ 273 (495)
|||+.++.+..+....+ .|+|..++.+.+||+.||.|||++|||||||||+||||+. ++.+||+|||++..... ..
T Consensus 95 mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~ 174 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK 174 (313)
T ss_pred eeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccccc
Confidence 99999887776665444 7999999999999999999999999999999999999999 79999999999987763 22
Q ss_pred CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGR-TEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~-~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
........||+.|||||++......+.++|||||||++.||+||++||... ...+.+..|.... .
T Consensus 175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~---~----------- 240 (313)
T KOG0198|consen 175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED---S----------- 240 (313)
T ss_pred ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC---C-----------
Confidence 223446789999999999985222345999999999999999999999873 3333333332111 0
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
.......+|+++.+||.+||..||.+||||.++|.|||.+..
T Consensus 241 -------------~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 241 -------------LPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred -------------CCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 112334588899999999999999999999999999999864
No 37
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-50 Score=408.04 Aligned_cols=257 Identities=27% Similarity=0.491 Sum_probs=225.7
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
...|....+||+|+.|.||.|+...+++.||||.+.+.... ..+.+.+|+.+|+.++|+|||.+++.|.- ...+|+
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~--~keLilnEi~Vm~~~~H~NiVnfl~Sylv--~deLWV 347 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP--KKELLLNEILVMRDLHHPNIVNFLDSYLV--GDELWV 347 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC--chhhhHHHHHHHHhccchHHHHHHHHhcc--cceeEE
Confidence 36788889999999999999999999999999999876543 33568899999999999999999998876 357999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
|||||+|+.+.++.... .++|.+++.|+++++.||+|||.+||+|||||.+|||++.+|.+||+|||++..+..... .
T Consensus 348 VMEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-K 425 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-K 425 (550)
T ss_pred EEeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC-c
Confidence 99999998887776654 599999999999999999999999999999999999999999999999999998876543 4
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
..+.+|||+|||||++.. ..|++++||||||+++.||+-|+|||-.+++...+..|.. -|.|.-
T Consensus 426 R~TmVGTPYWMAPEVvtr-k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~-ng~P~l-------------- 489 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTR-KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPKL-------------- 489 (550)
T ss_pred cccccCCCCccchhhhhh-cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh-cCCCCc--------------
Confidence 577899999999999876 6799999999999999999999999999888887777754 233321
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.....+|+.+++||.+||+.|+.+|++|.|||+||||+.
T Consensus 490 -----------k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 490 -----------KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred -----------CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 223458899999999999999999999999999999954
No 38
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.8e-51 Score=369.85 Aligned_cols=255 Identities=31% Similarity=0.455 Sum_probs=226.8
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
.++|++++.||+|-||.||+|+.+.++-.||+|++.+..+ .....+.+.+|++|...|+||||+++|++|.+ ...+|
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd--~~riy 98 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD--SKRIY 98 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec--cceeE
Confidence 6899999999999999999999999999999999988765 33445678999999999999999999999998 67899
Q ss_pred EEEeeccCChhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 011041 196 LVFKYMEHDLAGLAAS--PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH 273 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~--~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~ 273 (495)
+++||...+.+...+. ...+|+|..++.|+.|++.||.|||.++||||||||+|+|++.+|.+||+|||++.....
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~-- 176 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-- 176 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCC--
Confidence 9999998765554443 667899999999999999999999999999999999999999999999999999976542
Q ss_pred CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
....+.|||..|.+||+..+ ..++..+|+|++|++.||++.|.+||...+..+...+|.+.-...+
T Consensus 177 -~kR~tlcgt~dyl~pEmv~~-~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p------------ 242 (281)
T KOG0580|consen 177 -NKRKTLCGTLDYLPPEMVEG-RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP------------ 242 (281)
T ss_pred -CCceeeecccccCCHhhcCC-CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC------------
Confidence 33477899999999999877 5689999999999999999999999999999999999977532221
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
..++.++.|||.+||.++|.+|.+..|++.|||+..
T Consensus 243 -----------------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 243 -----------------STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred -----------------cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 458899999999999999999999999999999864
No 39
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=7.6e-49 Score=392.48 Aligned_cols=289 Identities=35% Similarity=0.663 Sum_probs=238.8
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
..++|.+++.||+|+||.||+|+++.++..||+|.+...... .....+.+|+.+++.++||||+++++++.. +...|
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~ 80 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHT--DKSLT 80 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEee--CCeEE
Confidence 357899999999999999999999999999999999765432 223456689999999999999999999987 56799
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+||||+++++...+......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... .
T Consensus 81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~ 159 (309)
T cd07872 81 LVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT-K 159 (309)
T ss_pred EEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc-c
Confidence 999999998887776666678999999999999999999999999999999999999999999999999997653322 2
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
......+|+.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+++..+.+..+.|+.........
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK 239 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence 23345789999999998776678999999999999999999999999999999999999999999988887643211100
Q ss_pred -CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCC
Q 011041 356 -FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKP 408 (495)
Q Consensus 356 -~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~ 408 (495)
+................+++++.+||.+||..||.+|+|+.|+|+||||+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 00000000111223456788999999999999999999999999999998743
No 40
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=6.8e-49 Score=397.17 Aligned_cols=290 Identities=34% Similarity=0.536 Sum_probs=231.4
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC---CceeE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM---SCSLY 195 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~---~~~~~ 195 (495)
+|++.+.||+|+||.||+|++..+|..||||++............+.+|+.+|+.++||||+++++++.... ...+|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 589999999999999999999999999999998754333344456789999999999999999999875432 23589
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC--
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH-- 273 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~-- 273 (495)
+||||+++++...+.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 lv~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 159 (338)
T cd07859 81 VVFELMESDLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 159 (338)
T ss_pred EEEecCCCCHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence 9999999877665543 4469999999999999999999999999999999999999999999999999997543221
Q ss_pred CCCCccccccCCCCCcccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
.......+||+.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+...++..+....+.+....+.......
T Consensus 160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 239 (338)
T cd07859 160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEK 239 (338)
T ss_pred cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence 1222456799999999987642 468899999999999999999999999999988888888888888776554321110
Q ss_pred CccC--CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCC
Q 011041 353 ATIF--KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPY 409 (495)
Q Consensus 353 ~~~~--~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~ 409 (495)
...+ .-...........++.+++.+.+||.+||+.||.+|||+.++|+||||+....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 240 ARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred HHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 0000 00000011123345567888999999999999999999999999999987544
No 41
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.3e-50 Score=390.14 Aligned_cols=255 Identities=25% Similarity=0.435 Sum_probs=230.5
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
..+|++.+.||+|.||.|-+|++...|+.||||.|+++.. +....-.+++||+||..|+||||+.+|++|++ ...+.
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFEN--kdKIv 129 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFEN--KDKIV 129 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcC--CceEE
Confidence 3679999999999999999999999999999999999887 55567789999999999999999999999998 46799
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
|||||..++.+.+++...+.|+|.+++.||+||+.|+.|||.++|+|||||.||||+|.++++||+|||++..+... .
T Consensus 130 ivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~--k 207 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK--K 207 (668)
T ss_pred EEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc--c
Confidence 99999999999999988889999999999999999999999999999999999999999999999999999988543 5
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
..+++||+|-|.+||++.|..+-++.+|-|||||+||.|+.|..||.|.+......+|-+.-..
T Consensus 208 fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYr---------------- 271 (668)
T KOG0611|consen 208 FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYR---------------- 271 (668)
T ss_pred HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccccc----------------
Confidence 5788999999999999998777789999999999999999999999999988888887543211
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
-+.-|.++.-||+.||.+||++|.|++++-.|=|++
T Consensus 272 --------------EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 272 --------------EPETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred --------------CCCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 123467788899999999999999999999987765
No 42
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=8.7e-49 Score=387.87 Aligned_cols=282 Identities=38% Similarity=0.641 Sum_probs=227.2
Q ss_pred CCeeeeeeecccCceEEEEEEECC-CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC---CCCCeeeeeceeec---cC
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTL-TGQIVALKKVRFDNLEPESVRFMAREILILRRL---DHPNVVKLEGLVTS---RM 190 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~-~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~~---~~ 190 (495)
++|++++.||+|+||.||+|++.. +|..||+|++............+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 369999999999999999999854 578899999876544333334556788877766 69999999998752 22
Q ss_pred CceeEEEEeeccCChhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeeccccccc
Q 011041 191 SCSLYLVFKYMEHDLAGLAASP-TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFF 269 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~~-~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~ 269 (495)
...+++||||+.+++...+... ...+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++...
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY 160 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence 4568999999998877766542 345899999999999999999999999999999999999999999999999999866
Q ss_pred CCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 270 DPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 270 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
... .......||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.++.+.+.+|....+.+....|+...
T Consensus 161 ~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (290)
T cd07862 161 SFQ--MALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 237 (290)
T ss_pred cCC--cccccccccccccChHHHhC-CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhh
Confidence 433 23345678999999999876 568999999999999999999999999999999999999998888877775432
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
......+... -...+.....++++.+.+||.+||+.||++|||+.++|+||||
T Consensus 238 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 238 ALPRQAFHSK--SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred cccchhccCC--CCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 1111111110 0112333445678889999999999999999999999999998
No 43
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=6.9e-49 Score=403.29 Aligned_cols=289 Identities=31% Similarity=0.481 Sum_probs=234.2
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC---CceeE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM---SCSLY 195 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~---~~~~~ 195 (495)
+|++++.||+|+||.||+|++..+|+.||||++............+.+|+.+|+.++|+||+++++++.... ...+|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999999999999999998754334445567889999999999999999999987632 12689
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+||||+.+++...+.. ...+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++.........
T Consensus 81 lv~e~~~~~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~ 159 (372)
T cd07853 81 VVTELMQSDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK 159 (372)
T ss_pred EEeeccccCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence 9999999887766544 447999999999999999999999999999999999999999999999999999876544333
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc-
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT- 354 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~- 354 (495)
.....++|+.|+|||++.+...|+.++||||||||+|||++|++||.+.+..+++..|...+|.+....+.........
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 239 (372)
T cd07853 160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAH 239 (372)
T ss_pred cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHH
Confidence 4455678999999999987667899999999999999999999999999999999999999998886654321100000
Q ss_pred c--CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCC
Q 011041 355 I--FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKP 408 (495)
Q Consensus 355 ~--~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~ 408 (495)
. ..........+.......++++.+||.+||++||.+|||+.|+|+||||....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 240 ILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred HHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence 0 00000000111122345678899999999999999999999999999998743
No 44
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-49 Score=384.43 Aligned_cols=271 Identities=24% Similarity=0.379 Sum_probs=224.5
Q ss_pred CCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 115 RRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 115 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
...++|++.+.||.|..++||+|+...+++.||||++..+....+ ...+++|+..|+.++||||++++..|.. +..+
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv--~~~L 99 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVV--DSEL 99 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEe--ccee
Confidence 346899999999999999999999999999999999998876544 7889999999999999999999999987 5689
Q ss_pred EEEEeeccCChhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 195 YLVFKYMEHDLAGLAASP--TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~--~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
|+||.||.+|....++.. ...|+|..++.|+++++.||.|||.+|.||||||+.||||+.+|.|||+|||.+..+-..
T Consensus 100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 999999998765554432 224899999999999999999999999999999999999999999999999988655332
Q ss_pred CCC---CCccccccCCCCCccccc-CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhC
Q 011041 273 HKQ---PMTSRVVTLWYRPPELLL-GATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 273 ~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 348 (495)
... .+.+.+||++|||||+++ ....|+.++||||||++..||.+|..||..-.+...+..-+ -+.|+... .
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL--qn~pp~~~--t- 254 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL--QNDPPTLL--T- 254 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh--cCCCCCcc--c-
Confidence 211 125669999999999954 34679999999999999999999999999888777664433 34443111 0
Q ss_pred CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 349 KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
.. .-.+..+.++..++.+|..||++||.+||||+++|+|+||+..
T Consensus 255 ------~~--------~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 255 ------SG--------LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA 299 (516)
T ss_pred ------cc--------CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence 00 0112334577789999999999999999999999999999864
No 45
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.7e-48 Score=395.90 Aligned_cols=285 Identities=31% Similarity=0.514 Sum_probs=229.6
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC----c
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS----C 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~----~ 192 (495)
.++|++++.||+|+||.||+|++..+|..||+|++............+.+|+.+++.++||||+++++++..... .
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 578999999999999999999999999999999997654445556677899999999999999999998865321 3
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.+|+||||+++++...+.. .+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++......
T Consensus 100 ~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 176 (359)
T cd07876 100 DVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 176 (359)
T ss_pred eeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccC
Confidence 5799999999987766532 4889999999999999999999999999999999999999999999999999765332
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC--
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL-- 350 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~-- 350 (495)
.......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.+..+.+...++.....
T Consensus 177 --~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (359)
T cd07876 177 --FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTV 253 (359)
T ss_pred --ccCCCCcccCCCCCchhccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 22345678999999999876 5689999999999999999999999999999999999999888887665443110
Q ss_pred -------CCCccCCCCcccccc----cccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 351 -------PHATIFKPQQSYKRC----IAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 351 -------~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
+..........+..+ ........++.+.+||.+||+.||.+|||+.|+|+||||+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 321 (359)
T cd07876 254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVW 321 (359)
T ss_pred HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhh
Confidence 000000000000000 011122346788999999999999999999999999999853
No 46
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.5e-47 Score=404.95 Aligned_cols=281 Identities=23% Similarity=0.327 Sum_probs=219.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCC------CCeeeeeceeeccC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDH------PNVVKLEGLVTSRM 190 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H------pnIv~l~~~~~~~~ 190 (495)
.++|++++.||+|+||+||+|++..+++.||||+++... ........|+.+++.+.| .+|+++++++...
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~- 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE- 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC-
Confidence 578999999999999999999999999999999996432 223445668888877754 4588999988764
Q ss_pred CceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCC-------------
Q 011041 191 SCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEG------------- 256 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~------------- 256 (495)
...+|+|||+++++++..+... ..+++..++.|+.||+.||+|||+ .|||||||||+||||+.++
T Consensus 204 ~~~~~iv~~~~g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~ 282 (467)
T PTZ00284 204 TGHMCIVMPKYGPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPP 282 (467)
T ss_pred CceEEEEEeccCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCC
Confidence 4579999999988887766543 479999999999999999999997 6999999999999998765
Q ss_pred ---cEEEeecccccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 011041 257 ---ILTIADFGLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKI 333 (495)
Q Consensus 257 ---~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i 333 (495)
.+||+|||++.... ......+||+.|+|||++.+ ..|+.++|||||||+||||++|++||.+.+..+.+..|
T Consensus 283 ~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i 357 (467)
T PTZ00284 283 DPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLG-LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLM 357 (467)
T ss_pred CCceEEECCCCccccCc----cccccccCCccccCcHHhhc-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 49999999886432 22345689999999999987 56899999999999999999999999999999999999
Q ss_pred HHhcCCCChhhhhhCCCCCCc-cC------CCC---cccccccc-cccC--CCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 334 FKLCGSPSEEYWKKSKLPHAT-IF------KPQ---QSYKRCIA-ETFK--DFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 334 ~~~~g~~~~~~~~~~~~~~~~-~~------~~~---~~~~~~~~-~~~~--~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.+.+|.++..++......... .+ .+. ..+..... ..+. ...+.+.|||.+||++||.+|||+.|+|+
T Consensus 358 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 358 EKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 999998877654322111100 00 000 00000000 0000 01355789999999999999999999999
Q ss_pred CCCCCCC
Q 011041 401 SEFFTTK 407 (495)
Q Consensus 401 hp~f~~~ 407 (495)
||||...
T Consensus 438 Hp~~~~~ 444 (467)
T PTZ00284 438 HPYVLKY 444 (467)
T ss_pred Ccccccc
Confidence 9999864
No 47
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.1e-48 Score=388.32 Aligned_cols=256 Identities=23% Similarity=0.359 Sum_probs=219.0
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++.+.||+|+||.||+|++..+|+.||||++..... .......+.+|+.+|+.++||||+++++++.+ ...+|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~l 78 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD--QRFLYM 78 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc--CCeEEE
Confidence 479999999999999999999999999999999976433 23445678899999999999999999998877 568999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+.++.+..+......+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~---- 154 (291)
T cd05612 79 LMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR---- 154 (291)
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC----
Confidence 9999998766665555667999999999999999999999999999999999999999999999999999865432
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+....-
T Consensus 155 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~------------------ 215 (291)
T cd05612 155 TWTLCGTPEYLAPEVIQS-KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL------------------ 215 (291)
T ss_pred cccccCChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc------------------
Confidence 234578999999998876 5689999999999999999999999999888777777654210
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC-----HHHHHhCCCCCCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT-----ATAALRSEFFTTKPY 409 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----a~elL~hp~f~~~~~ 409 (495)
.....+++.+.+||.+||..||.+|++ +.++++||||+...|
T Consensus 216 -----------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~ 262 (291)
T cd05612 216 -----------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDW 262 (291)
T ss_pred -----------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCH
Confidence 111235678899999999999999995 999999999987555
No 48
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.5e-48 Score=395.36 Aligned_cols=285 Identities=27% Similarity=0.487 Sum_probs=230.3
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC----Cc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM----SC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~ 192 (495)
.++|++++.||+|+||.||+|++..+++.||||++............+.+|+.+++.++||||+++++++.... ..
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 57899999999999999999999999999999999765444455567789999999999999999999875421 24
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.+|+||||+++++...+.. .+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++......
T Consensus 103 ~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 179 (364)
T cd07875 103 DVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179 (364)
T ss_pred eEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC
Confidence 6899999999987766542 5889999999999999999999999999999999999999999999999999865432
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
.......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+.++....+.+....+.......
T Consensus 180 --~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (364)
T cd07875 180 --FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 256 (364)
T ss_pred --CcccCCcccCCcCCHHHHhC-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHH
Confidence 22345678999999999876 568999999999999999999999999999999999999999988876655432110
Q ss_pred CccCCCCcc-------------cccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 353 ATIFKPQQS-------------YKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 353 ~~~~~~~~~-------------~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
......... ............+..+.+||.+||+.||.+|||+.++|+||||...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~ 324 (364)
T cd07875 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324 (364)
T ss_pred HHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 000000000 0000111122235678999999999999999999999999999753
No 49
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-48 Score=402.24 Aligned_cols=282 Identities=24% Similarity=0.346 Sum_probs=220.3
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
...|++++.||+|+||.||+|++..+++.||||.... ..+.+|+.+|+.|+|||||++++++.. ....++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~--~~~~~l 160 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTY--NKFTCL 160 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEE--CCeeEE
Confidence 4689999999999999999999999999999997532 345689999999999999999999987 567999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
|||++.+++...+.. ...+++..++.++.||+.||.|||++|||||||||+||||+.++.+||+|||++..........
T Consensus 161 v~e~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~ 239 (391)
T PHA03212 161 ILPRYKTDLYCYLAA-KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANK 239 (391)
T ss_pred EEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccc
Confidence 999999887766544 3468999999999999999999999999999999999999999999999999997543332233
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-------ChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGR-------TEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~-------~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
....+||+.|+|||++.+ ..|+.++|||||||++|+|++|..||.+. ....++..+....|.++.+++....
T Consensus 240 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 240 YYGWAGTIATNAPELLAR-DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred cccccCccCCCChhhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 445689999999999876 56899999999999999999999877543 2346677777777776544321100
Q ss_pred CCCCccC------CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCCC
Q 011041 350 LPHATIF------KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPYA 410 (495)
Q Consensus 350 ~~~~~~~------~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~~ 410 (495)
......+ .......+........++.++.+||.+||++||.+|||+.|+|+||||+..+.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 0000000 000000000111223467789999999999999999999999999999875433
No 50
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=5.4e-48 Score=381.60 Aligned_cols=281 Identities=37% Similarity=0.658 Sum_probs=227.5
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC---CCCCeeeeeceeecc---CCc
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL---DHPNVVKLEGLVTSR---MSC 192 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~~~---~~~ 192 (495)
+|++++.||+|+||+||+|+++.+|+.||+|.+............+.+|+.+++.+ +||||+++++++... ...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 48999999999999999999999999999999876533322233455677777665 799999999987642 235
Q ss_pred eeEEEEeeccCChhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 193 SLYLVFKYMEHDLAGLAASP-TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~-~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
.++++|||+.+++...+... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC 160 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC
Confidence 68999999998877665442 34589999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 272 NHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 272 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
. .......||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+.++....+.+....|+.....
T Consensus 161 ~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07863 161 Q--MALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTL 237 (288)
T ss_pred c--ccCCCccccccccCchHhhC-CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccc
Confidence 2 22345578999999999876 46899999999999999999999999999999999999998888887777642211
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
....+.+. ....+....+.++..+.+||.+||++||.+|||+.++|.||||
T Consensus 238 ~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 238 PRGAFSPR--GPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cccccCCC--CCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 11111111 1122344455678889999999999999999999999999998
No 51
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-49 Score=392.16 Aligned_cols=258 Identities=26% Similarity=0.482 Sum_probs=233.6
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.+-|.+.+.||+|.|++|-+|++.-||..||||+|++..++.-....+.+|++.|+.+.|||||+||+++.. ...+||
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDT--QTKlyL 94 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDT--QTKLYL 94 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcc--cceEEE
Confidence 467999999999999999999999999999999999998877777888899999999999999999999987 457999
Q ss_pred EEeeccC-ChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC-CCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEH-DLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN-EGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~-~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~-~~~vkL~DFG~a~~~~~~~~ 274 (495)
|+|+-++ ++..+++.....+.|..+++||+||+.|+.|||+..|||||||||||.+.+ -|.|||+|||++..+.++
T Consensus 95 iLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG-- 172 (864)
T KOG4717|consen 95 ILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG-- 172 (864)
T ss_pred EEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCc--
Confidence 9999987 566666666778999999999999999999999999999999999988755 689999999999999876
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
...++.||++.|-|||+++|..+..+++||||||||||.|+||++||...++.+.+..|+......+
T Consensus 173 ~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvP------------- 239 (864)
T KOG4717|consen 173 KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVP------------- 239 (864)
T ss_pred chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCc-------------
Confidence 4568889999999999999987777899999999999999999999999999999999987544332
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
..++.+++|||..||..||.+|.+.++|..|+|++..
T Consensus 240 ----------------shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~ 276 (864)
T KOG4717|consen 240 ----------------SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAG 276 (864)
T ss_pred ----------------hhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCC
Confidence 3578899999999999999999999999999999864
No 52
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=8.6e-48 Score=383.28 Aligned_cols=287 Identities=38% Similarity=0.695 Sum_probs=237.0
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
..++|++++.||.|+||.||+|++..++..||+|.+...... .....+.+|+.+++.++|+||+++++++.. ...+|
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~--~~~~~ 80 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHT--EKSLT 80 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEec--CCeEE
Confidence 467899999999999999999999999999999998754322 223456789999999999999999999987 56799
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+||||+.+++...+......+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++....... .
T Consensus 81 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~ 159 (301)
T cd07873 81 LVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-K 159 (301)
T ss_pred EEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-C
Confidence 999999998887776666679999999999999999999999999999999999999999999999999997653322 2
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC-c
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA-T 354 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~-~ 354 (495)
......+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+++..+....+.+....|+....... .
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 239 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccc
Confidence 223456789999999987766788999999999999999999999999999999999999999988888865311100 0
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.+........++......+++.+.+||.+||+.||.+|||+.|+|+||||..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~ 291 (301)
T cd07873 240 SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC 291 (301)
T ss_pred ccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 0011111112223334567888999999999999999999999999999975
No 53
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.3e-48 Score=394.70 Aligned_cols=259 Identities=24% Similarity=0.360 Sum_probs=220.5
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
..++|++.+.||+|+||.||+|+++.+|+.||||++..... .......+.+|+.+|+.++||||+++++++.+ ...+
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~ 93 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD--ENRV 93 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc--CCEE
Confidence 35889999999999999999999999999999999976532 23445678899999999999999999999987 5689
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
|+||||+.++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++......
T Consensus 94 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-- 171 (329)
T PTZ00263 94 YFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR-- 171 (329)
T ss_pred EEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC--
Confidence 999999988766665555668999999999999999999999999999999999999999999999999999866432
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+.... +
T Consensus 172 --~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~--~-------------- 232 (329)
T PTZ00263 172 --TFTLCGTPEYLAPEVIQS-KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGR--L-------------- 232 (329)
T ss_pred --cceecCChhhcCHHHHcC-CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC--c--------------
Confidence 234579999999999876 567899999999999999999999999888777776664311 0
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC-----HHHHHhCCCCCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT-----ATAALRSEFFTTKPYA 410 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----a~elL~hp~f~~~~~~ 410 (495)
.....++..+.+||.+||+.||.+|++ +.+++.||||....|.
T Consensus 233 -------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~ 280 (329)
T PTZ00263 233 -------------KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWD 280 (329)
T ss_pred -------------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHH
Confidence 001235677899999999999999997 7999999999875543
No 54
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.4e-48 Score=396.85 Aligned_cols=264 Identities=26% Similarity=0.362 Sum_probs=218.1
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++++.||+|+||+||+|++..+++.||||++.+... .......+.+|+.++..++|+||+++++.+.+ ...+|+
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~--~~~~~l 78 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD--KLNLYL 78 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec--CCeEEE
Confidence 479999999999999999999999999999999976433 33445678899999999999999999999987 568999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC--
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK-- 274 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~-- 274 (495)
||||+.++.+..++.....+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++..+.....
T Consensus 79 v~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 79 IMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred EEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999876666665566899999999999999999999999999999999999999999999999999875432110
Q ss_pred --------------------------------CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 011041 275 --------------------------------QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMP 322 (495)
Q Consensus 275 --------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~ 322 (495)
......+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 01124589999999999876 568999999999999999999999999
Q ss_pred CCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCC---ccCHHHHH
Q 011041 323 GRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAE---RQTATAAL 399 (495)
Q Consensus 323 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~---R~ta~elL 399 (495)
+.+..+.+.++........ + .....+++++.+||.+|+. +|.+ ||+++|++
T Consensus 238 ~~~~~~~~~~i~~~~~~~~--------------~-----------p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~ 291 (363)
T cd05628 238 SETPQETYKKVMNWKETLI--------------F-----------PPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIK 291 (363)
T ss_pred CCCHHHHHHHHHcCcCccc--------------C-----------CCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHh
Confidence 9988888877764221110 0 0012367889999999876 5554 58999999
Q ss_pred hCCCCCCCCCC
Q 011041 400 RSEFFTTKPYA 410 (495)
Q Consensus 400 ~hp~f~~~~~~ 410 (495)
+||||+...|.
T Consensus 292 ~hp~f~~~~~~ 302 (363)
T cd05628 292 TNPFFEGVDWE 302 (363)
T ss_pred CCCCCCCCCHH
Confidence 99999987664
No 55
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.9e-48 Score=392.48 Aligned_cols=253 Identities=25% Similarity=0.380 Sum_probs=214.2
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeecc
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYME 202 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~ 202 (495)
+.||+|+||.||+|++..+|+.||||++.+... .......+.+|+.+|+.++||||+++++++.. ...+|+||||+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~lv~e~~~ 78 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT--HDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc--CCEEEEEEeCCC
Confidence 369999999999999999999999999986533 33445667889999999999999999999887 568999999999
Q ss_pred CChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccccc
Q 011041 203 HDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVV 282 (495)
Q Consensus 203 ~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g 282 (495)
++.+.........+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++...... .......+|
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~~~~~~g 157 (323)
T cd05571 79 GGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTFCG 157 (323)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCcccceec
Confidence 8777666666668999999999999999999999999999999999999999999999999998754222 122345679
Q ss_pred cCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCccc
Q 011041 283 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSY 362 (495)
Q Consensus 283 t~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 362 (495)
|+.|+|||++.+ ..|+.++|||||||++|||++|.+||.+.+.......+.....
T Consensus 158 t~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~------------------------ 212 (323)
T cd05571 158 TPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI------------------------ 212 (323)
T ss_pred CccccChhhhcC-CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC------------------------
Confidence 999999999876 5689999999999999999999999998877766665532110
Q ss_pred ccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCC
Q 011041 363 KRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPY 409 (495)
Q Consensus 363 ~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~ 409 (495)
.....+++++.+||.+||..||.+|| ++.++++||||....|
T Consensus 213 -----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~ 259 (323)
T cd05571 213 -----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINW 259 (323)
T ss_pred -----CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 11134678899999999999999999 8999999999987654
No 56
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.6e-47 Score=383.98 Aligned_cols=278 Identities=36% Similarity=0.652 Sum_probs=217.7
Q ss_pred eeeecccCceEEEEEEEC--CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEee
Q 011041 123 LDKIGQGTYSNVYKARDT--LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKY 200 (495)
Q Consensus 123 ~~~LG~G~~g~Vy~a~~~--~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~ 200 (495)
.++||+|+||+||+|+++ .++..||+|.+...... ..+.+|+.+|+.++||||+++++++....+..+|++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc----HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence 468999999999999965 46789999998754322 346689999999999999999999876656789999999
Q ss_pred ccCChhhhhhC--------CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeee----CCCCcEEEeecccccc
Q 011041 201 MEHDLAGLAAS--------PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLI----DNEGILTIADFGLASF 268 (495)
Q Consensus 201 ~~~~l~~~~~~--------~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl----~~~~~vkL~DFG~a~~ 268 (495)
+++++...+.. ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 82 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred cCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 99987665432 12358999999999999999999999999999999999999 4567899999999987
Q ss_pred cCCCCC--CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHhc
Q 011041 269 FDPNHK--QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTE---------VEQLHKIFKLC 337 (495)
Q Consensus 269 ~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~---------~~~~~~i~~~~ 337 (495)
+..... ......+||+.|+|||++.+...|+.++|||||||++|+|++|.+||.+..+ .+++..++...
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 653321 1234567899999999998766789999999999999999999999986543 46788899999
Q ss_pred CCCChhhhhhCC-CCCCccCC--------CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 338 GSPSEEYWKKSK-LPHATIFK--------PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 338 g~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
+.+....|.... .+...... ........+.......+.++.+||.+||++||.+|+|++|+|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 998888776532 11111000 00000111111112335678999999999999999999999999998
No 57
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1e-47 Score=378.80 Aligned_cols=282 Identities=41% Similarity=0.710 Sum_probs=232.4
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|++.+.||+|+||.||+|++..+|+.||+|.+............+.+|+.+++.++|+||+++++++.+ ...+|+++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHS--DKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhcc--CCceEEEE
Confidence 4889999999999999999999999999999997654433344567789999999999999999999987 56799999
Q ss_pred eeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCc
Q 011041 199 KYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMT 278 (495)
Q Consensus 199 e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~ 278 (495)
||+++++...+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ....
T Consensus 79 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~ 157 (284)
T cd07839 79 EYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-RCYS 157 (284)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC-CCcC
Confidence 999998887776656679999999999999999999999999999999999999999999999999998654332 2234
Q ss_pred cccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHHhcCCCChhhhhhCC-CCCCccC
Q 011041 279 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPI-MPGRTEVEQLHKIFKLCGSPSEEYWKKSK-LPHATIF 356 (495)
Q Consensus 279 ~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~p-f~~~~~~~~~~~i~~~~g~~~~~~~~~~~-~~~~~~~ 356 (495)
...+++.|+|||++.+...++.++|||||||++|+|++|..| |.+.+..+.+..+.+.++.+....|.... .+....+
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07839 158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPY 237 (284)
T ss_pred CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccccc
Confidence 456789999999987766689999999999999999998766 66777788889999999888887776422 1111111
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
+.......+......+++++.+||.+||..||.+|||++++|.||||
T Consensus 238 -~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 238 -PMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred -CCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 11111111233445688999999999999999999999999999998
No 58
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.7e-47 Score=390.28 Aligned_cols=285 Identities=29% Similarity=0.504 Sum_probs=230.0
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC----Cc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM----SC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~ 192 (495)
.++|++++.||+|+||.||+|++..+++.||||++............+.+|+.+++.++||||+++++++.... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 95 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ 95 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence 57899999999999999999999999999999999765545555667889999999999999999999886432 23
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.+|+||||+++++...+.. .+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++......
T Consensus 96 ~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~ 172 (355)
T cd07874 96 DVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172 (355)
T ss_pred eeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc
Confidence 5799999999987766532 5889999999999999999999999999999999999999999999999999865432
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
.......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+...++.+..+.+.......
T Consensus 173 --~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (355)
T cd07874 173 --FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249 (355)
T ss_pred --cccCCccccCCccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHH
Confidence 22345678999999999876 568999999999999999999999999999999999999888888776654422100
Q ss_pred CccCCCCcc-------------cccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 353 ATIFKPQQS-------------YKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 353 ~~~~~~~~~-------------~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
......... ............+.++.+||.+||..||.+|||+.|+|+||||...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred HHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 000000000 0000111122345678999999999999999999999999999754
No 59
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.8e-48 Score=397.37 Aligned_cols=264 Identities=29% Similarity=0.420 Sum_probs=219.1
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++++.||+|+||.||+|++..+|+.||||++.+... .......+.+|+.+|..++||||+++++++.+ ...+|+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~~l 78 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD--ENYLYL 78 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc--CCeEEE
Confidence 479999999999999999999999999999999986533 33455678899999999999999999999987 568999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC-
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ- 275 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~- 275 (495)
||||+.++.+..++.....+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++..+......
T Consensus 79 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 79 IMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred EECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 9999998766666555567999999999999999999999999999999999999999999999999998754321100
Q ss_pred ------------------------------------CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 011041 276 ------------------------------------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKP 319 (495)
Q Consensus 276 ------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~ 319 (495)
.....+||+.|+|||++.+ ..++.++|||||||++|+|++|.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC-CCCCCeeeeecchhHHHHhhcCCC
Confidence 1123479999999998875 568999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC---HH
Q 011041 320 IMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT---AT 396 (495)
Q Consensus 320 pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t---a~ 396 (495)
||.+.+..+....+........ ......+++++.+||.+||. ||.+|++ +.
T Consensus 238 Pf~~~~~~~~~~~i~~~~~~~~-------------------------~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~ 291 (364)
T cd05599 238 PFCSDNPQETYRKIINWKETLQ-------------------------FPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVN 291 (364)
T ss_pred CCCCCCHHHHHHHHHcCCCccC-------------------------CCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHH
Confidence 9999888777766653211100 00011467889999999997 9999998 99
Q ss_pred HHHhCCCCCCCCCC
Q 011041 397 AALRSEFFTTKPYA 410 (495)
Q Consensus 397 elL~hp~f~~~~~~ 410 (495)
++|+||||+...|.
T Consensus 292 ~ll~h~~~~~~~~~ 305 (364)
T cd05599 292 EIKSHPFFKGVDWE 305 (364)
T ss_pred HHhcCCCcCCCCHH
Confidence 99999999986653
No 60
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.3e-47 Score=376.28 Aligned_cols=283 Identities=40% Similarity=0.713 Sum_probs=231.6
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|++++.||+|+||.||+|++..+|..||||++............+.+|+.+++.++||||+++++++.+ +..+|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ--ESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee--CCeEEEEE
Confidence 5889999999999999999999999999999997654444444667889999999999999999999987 56799999
Q ss_pred eeccCChhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 199 KYMEHDLAGLAAS--PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 199 e~~~~~l~~~~~~--~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||+.+++...+.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ..
T Consensus 79 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-~~ 157 (285)
T cd07861 79 EFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-RV 157 (285)
T ss_pred ecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-cc
Confidence 9999877665543 23578999999999999999999999999999999999999999999999999997654332 22
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
.....+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+....++...+.+....|+..........
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (285)
T cd07861 158 YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKN 237 (285)
T ss_pred ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHh
Confidence 23446789999999987766688999999999999999999999999998888888888888887777754221110000
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.........+......+++++.+||.+||..||.+|||+.++|.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 238 TFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 000001112233445688999999999999999999999999999998
No 61
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.7e-47 Score=388.50 Aligned_cols=285 Identities=34% Similarity=0.564 Sum_probs=230.0
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC----Cc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM----SC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~ 192 (495)
.++|++++.||+|+||.||+|.+..++..||||++............+.+|+.+|+.++|+||+++++++.... ..
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 47899999999999999999999999999999998765433344556778999999999999999999875421 24
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
..|++++++++++..... ...+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++......
T Consensus 94 ~~~~~~~~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 171 (343)
T cd07878 94 EVYLVTNLMGADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE 171 (343)
T ss_pred cEEEEeecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC
Confidence 579999999877765443 346999999999999999999999999999999999999999999999999999865432
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
....+||+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+....+.+..+.+.......
T Consensus 172 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07878 172 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEH 247 (343)
T ss_pred ----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhh
Confidence 3456789999999998776678999999999999999999999999999999999998888888766554321111
Q ss_pred CccCCCC--cccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 353 ATIFKPQ--QSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 353 ~~~~~~~--~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
...+... ......+...+...++.+.+||.+||..||.+|||+.|+|+||||...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~ 304 (343)
T cd07878 248 ARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY 304 (343)
T ss_pred HHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence 0000000 000011222334566778999999999999999999999999999864
No 62
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=6.4e-48 Score=390.04 Aligned_cols=265 Identities=26% Similarity=0.379 Sum_probs=223.1
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++++.||+|+||.||+|++..+|+.||||++.+... .......+.+|+.++..++||||+++++++.. ...+|+
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~--~~~~~l 78 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD--DEYLYL 78 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc--CCEEEE
Confidence 479999999999999999999999999999999986533 23345678889999999999999999999987 568999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+.++.+..+......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++..... .
T Consensus 79 v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----~ 154 (333)
T cd05600 79 AMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----Y 154 (333)
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc----c
Confidence 999999877776666666899999999999999999999999999999999999999999999999999976543 2
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
....+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+..+.+..+...........
T Consensus 155 ~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~------------ 221 (333)
T cd05600 155 ANSVVGSPDYMAPEVLRG-KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPV------------ 221 (333)
T ss_pred cCCcccCccccChhHhcC-CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCC------------
Confidence 345679999999999876 4789999999999999999999999999888877776654221111000
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPYA 410 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~~ 410 (495)
.......+++++.+||.+||..+|.+|+++.++++||||....|.
T Consensus 222 ---------~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~~ 266 (333)
T cd05600 222 ---------YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDWN 266 (333)
T ss_pred ---------CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCCHH
Confidence 000013468889999999999999999999999999999986653
No 63
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=8.2e-48 Score=396.61 Aligned_cols=263 Identities=28% Similarity=0.368 Sum_probs=215.2
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
.|++++.||+|+||+||+|++..+++.||||++.+... .......+.+|+.+|+.++|+||+++++++.+ ...+|+|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~--~~~~~lv 79 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYFV 79 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec--CCEEEEE
Confidence 68999999999999999999999999999999986543 34456778899999999999999999999987 5689999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC---
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK--- 274 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~--- 274 (495)
|||+.++.+..+......+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++..+.....
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 80 MDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 99998876665555556799999999999999999999999999999999999999999999999999754311000
Q ss_pred -------------------------------------------CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHH
Q 011041 275 -------------------------------------------QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCIL 311 (495)
Q Consensus 275 -------------------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil 311 (495)
......+||+.|+|||++.+ ..|+.++||||||||+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlG~il 238 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR-KGYTQLCDWWSVGVIL 238 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC-CCCCCccceeehhhHH
Confidence 00124579999999999876 5689999999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCC--C
Q 011041 312 AELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAID--P 389 (495)
Q Consensus 312 ~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~d--P 389 (495)
|||++|.+||...+..+...++........ ......+++++.+||.+||..+ |
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-------------------------~~~~~~~s~~~~dli~~ll~~~~~~ 293 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVINWENTLH-------------------------IPPQVKLSPEAVDLITKLCCSAEER 293 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHccccccC-------------------------CCCCCCCCHHHHHHHHHHccCcccc
Confidence 999999999998887766665543211110 0011246789999999977654 4
Q ss_pred CCccCHHHHHhCCCCCCCCC
Q 011041 390 AERQTATAALRSEFFTTKPY 409 (495)
Q Consensus 390 ~~R~ta~elL~hp~f~~~~~ 409 (495)
..|+++.++++||||+...|
T Consensus 294 ~~R~~~~~~l~hp~f~~~~~ 313 (381)
T cd05626 294 LGRNGADDIKAHPFFSEVDF 313 (381)
T ss_pred cCCCCHHHHhcCcccCCCCh
Confidence 45999999999999987554
No 64
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.2e-47 Score=379.40 Aligned_cols=261 Identities=23% Similarity=0.382 Sum_probs=213.9
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCC-hHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLE-PESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
.|++.+.||+|+||.||+|.+..+|+.||+|++.+.... ......+.+|+.+++.++|+||+++++++.+ ...+|+|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~--~~~~~lv 78 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET--KDALCLV 78 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc--CCeEEEE
Confidence 388899999999999999999999999999999765432 2334467789999999999999999999877 5679999
Q ss_pred EeeccCChhhhhh--CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 198 FKYMEHDLAGLAA--SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 198 ~e~~~~~l~~~~~--~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
|||+.++.+.... .....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .
T Consensus 79 ~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~ 156 (285)
T cd05631 79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG--E 156 (285)
T ss_pred EEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC--C
Confidence 9999976554333 23346899999999999999999999999999999999999999999999999999875432 2
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
.....+||+.|+|||++.+ ..|+.++|||||||++|+|++|++||.+.+.......+........
T Consensus 157 ~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-------------- 221 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINN-EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ-------------- 221 (285)
T ss_pred eecCCCCCCCccCHhhhcC-CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc--------------
Confidence 2345578999999999876 5689999999999999999999999998765443333332221111
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC-----HHHHHhCCCCCCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT-----ATAALRSEFFTTKPY 409 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----a~elL~hp~f~~~~~ 409 (495)
......+++++.+||.+||+.||.+|++ ++++++||||....|
T Consensus 222 -----------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05631 222 -----------EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINF 269 (285)
T ss_pred -----------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence 1122457888999999999999999997 999999999987544
No 65
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=6.9e-48 Score=391.04 Aligned_cols=259 Identities=24% Similarity=0.330 Sum_probs=219.9
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCC-eEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTG-QIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g-~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
..++|++.+.||+|+||.||+|++..++ ..||+|++.+... .......+.+|+.+++.++||||+++++++.+ ...
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--~~~ 105 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD--ESY 105 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe--CCE
Confidence 3578999999999999999999876655 7899999975433 33445678899999999999999999999987 568
Q ss_pred eEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 011041 194 LYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH 273 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~ 273 (495)
+|+||||+.++.+..++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~- 184 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR- 184 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC-
Confidence 9999999988766666666668999999999999999999999999999999999999999999999999999876432
Q ss_pred CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.......+.....
T Consensus 185 ---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~--------------- 245 (340)
T PTZ00426 185 ---TYTLCGTPEYIAPEILLN-VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII--------------- 245 (340)
T ss_pred ---cceecCChhhcCHHHHhC-CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC---------------
Confidence 235679999999999876 5678999999999999999999999999888777777653211
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCCC
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPYA 410 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~~ 410 (495)
.....+++.+.+||++||+.||.+|+ |++++++||||.+..|.
T Consensus 246 --------------~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~ 293 (340)
T PTZ00426 246 --------------YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWV 293 (340)
T ss_pred --------------CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence 11134667889999999999999995 89999999999976553
No 66
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.2e-47 Score=395.43 Aligned_cols=262 Identities=29% Similarity=0.394 Sum_probs=215.6
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
.|++++.||+|+||.||+|++..+++.||+|++.+... .......+.+|+.+++.++|+|||++++++.+ ...+|+|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~--~~~~~lv 79 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD--KDNLYFV 79 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe--CCEEEEE
Confidence 58999999999999999999999999999999976432 34456678899999999999999999999987 5689999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC----
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH---- 273 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~---- 273 (495)
|||+.++.+..+......+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|||++..+....
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 80 MDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 9999886655555555679999999999999999999999999999999999999999999999999975321000
Q ss_pred ------------------------------------------CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHH
Q 011041 274 ------------------------------------------KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCIL 311 (495)
Q Consensus 274 ------------------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil 311 (495)
.......+||+.|+|||++.+ ..|+.++|||||||+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil 238 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVIL 238 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC-CCCCCeeeEEechHHH
Confidence 000123579999999999876 5689999999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCC
Q 011041 312 AELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAE 391 (495)
Q Consensus 312 ~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~ 391 (495)
|||++|++||.+.+..+...++........ ......+++++.+||.+|+ .||.+
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-------------------------~p~~~~~s~~~~~li~~l~-~~p~~ 292 (382)
T cd05625 239 YEMLVGQPPFLAQTPLETQMKVINWQTSLH-------------------------IPPQAKLSPEASDLIIKLC-RGPED 292 (382)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHccCCCcC-------------------------CCCcccCCHHHHHHHHHHc-cCHhH
Confidence 999999999999887777666643211110 0011347889999999986 59999
Q ss_pred ccC---HHHHHhCCCCCCCCC
Q 011041 392 RQT---ATAALRSEFFTTKPY 409 (495)
Q Consensus 392 R~t---a~elL~hp~f~~~~~ 409 (495)
|++ +.++++||||....|
T Consensus 293 R~~~~~~~ei~~hp~f~~~~~ 313 (382)
T cd05625 293 RLGKNGADEIKAHPFFKTIDF 313 (382)
T ss_pred cCCCCCHHHHhcCCCcCCcCh
Confidence 997 999999999987654
No 67
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=9.7e-48 Score=395.47 Aligned_cols=263 Identities=26% Similarity=0.379 Sum_probs=215.6
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|.+++.||+|+||.||+|++..+|+.||||++.+... .......+.+|+.+++.++|||||++++++.+ ...+|+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~--~~~~~l 78 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD--AQYLYL 78 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc--CCeeEE
Confidence 479999999999999999999999999999999876432 33455678899999999999999999999987 568999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC-
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ- 275 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~- 275 (495)
||||+.++.+..+......+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++..+......
T Consensus 79 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 79 IMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 9999987666555555667999999999999999999999999999999999999999999999999998643210000
Q ss_pred ---------------------------------------------CCccccccCCCCCcccccCCCCCCchhhHHHHHHH
Q 011041 276 ---------------------------------------------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCI 310 (495)
Q Consensus 276 ---------------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvi 310 (495)
.....+||+.|+|||++.+ ..|+.++|||||||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvi 237 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWSLGAI 237 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc-CCCCCceeeEecchh
Confidence 0012479999999999876 568999999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCC
Q 011041 311 LAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPA 390 (495)
Q Consensus 311 l~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~ 390 (495)
+|||++|.+||.+.+..+.+..+........ + .....++.++.+||.+||. +|.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--------~-----------------p~~~~~s~~~~dli~~lL~-~~~ 291 (377)
T cd05629 238 MFECLIGWPPFCSENSHETYRKIINWRETLY--------F-----------------PDDIHLSVEAEDLIRRLIT-NAE 291 (377)
T ss_pred hhhhhcCCCCCCCCCHHHHHHHHHccCCccC--------C-----------------CCCCCCCHHHHHHHHHHhc-CHh
Confidence 9999999999999888777777654211100 0 0012367789999999998 777
Q ss_pred Cc---cCHHHHHhCCCCCCCCC
Q 011041 391 ER---QTATAALRSEFFTTKPY 409 (495)
Q Consensus 391 ~R---~ta~elL~hp~f~~~~~ 409 (495)
+| +|+.++|.||||+...|
T Consensus 292 ~r~~r~~~~~~l~hp~~~~~~~ 313 (377)
T cd05629 292 NRLGRGGAHEIKSHPFFRGVDW 313 (377)
T ss_pred hcCCCCCHHHHhcCCCcCCCCH
Confidence 65 59999999999987554
No 68
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.4e-47 Score=393.35 Aligned_cols=267 Identities=24% Similarity=0.341 Sum_probs=222.5
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
..++|++.+.||+|+||.||+|++..++..||+|++.+... .......+.+|+.+++.++||||+++++++.+ ...+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~--~~~~ 118 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD--DKYL 118 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec--CCEE
Confidence 46899999999999999999999999999999999975432 23344567889999999999999999999887 5689
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
|+||||+.++.+..+... ..+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++........
T Consensus 119 ~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~ 197 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM 197 (370)
T ss_pred EEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 999999987766555443 3689999999999999999999999999999999999999999999999999987654332
Q ss_pred CCCccccccCCCCCcccccCC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGA---TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~---~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
......+||+.|+|||++.+. ..++.++|||||||++|||++|.+||.+.+....+.+|........ +
T Consensus 198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~---~------ 268 (370)
T cd05596 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLT---F------ 268 (370)
T ss_pred ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCC---C------
Confidence 233456799999999998653 2478999999999999999999999999888877777754211110 0
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCC--ccCHHHHHhCCCCCCCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAE--RQTATAALRSEFFTTKPYA 410 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~--R~ta~elL~hp~f~~~~~~ 410 (495)
.....+|.++.+||.+||..+|.+ |+|++++++||||+...|.
T Consensus 269 ----------------~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~~ 313 (370)
T cd05596 269 ----------------PDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQWT 313 (370)
T ss_pred ----------------CCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCCChh
Confidence 011246788999999999999998 9999999999999987664
No 69
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=8.1e-48 Score=395.86 Aligned_cols=263 Identities=28% Similarity=0.362 Sum_probs=215.5
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++++.||+|+||.||+|++..+++.||||++.+... .......+.+|+.+|+.++|+||+++++.+.+ ...+|+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~~l 78 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYF 78 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc--CCEEEE
Confidence 479999999999999999999999999999999875432 22345668899999999999999999999987 568999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC---
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH--- 273 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~--- 273 (495)
||||+.++.+..++.....+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++..+....
T Consensus 79 v~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 79 VMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 99999887666665556679999999999999999999999999999999999999999999999999975331100
Q ss_pred ---------------------------------------CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHH
Q 011041 274 ---------------------------------------KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAEL 314 (495)
Q Consensus 274 ---------------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~el 314 (495)
.......+||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC-CCCCcceeeeeccceeeeh
Confidence 001123579999999999876 5689999999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCcc-
Q 011041 315 LAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQ- 393 (495)
Q Consensus 315 ltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~- 393 (495)
++|++||.+.+..+....+........ ......+++++.+||.+|+ .||.+|+
T Consensus 238 l~G~~Pf~~~~~~~~~~~i~~~~~~~~-------------------------~~~~~~~s~~~~~li~~l~-~~p~~R~~ 291 (376)
T cd05598 238 LVGQPPFLADTPAETQLKVINWETTLH-------------------------IPSQAKLSREASDLILRLC-CGAEDRLG 291 (376)
T ss_pred hhCCCCCCCCCHHHHHHHHhccCcccc-------------------------CCCCCCCCHHHHHHHHHHh-cCHhhcCC
Confidence 999999999887776666543111100 0011346788999999977 5999999
Q ss_pred --CHHHHHhCCCCCCCCC
Q 011041 394 --TATAALRSEFFTTKPY 409 (495)
Q Consensus 394 --ta~elL~hp~f~~~~~ 409 (495)
|+.++++||||....+
T Consensus 292 ~~t~~ell~h~~~~~~~~ 309 (376)
T cd05598 292 KNGADEIKAHPFFKGIDF 309 (376)
T ss_pred CCCHHHHhCCCCcCCCCH
Confidence 9999999999987544
No 70
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.6e-47 Score=384.96 Aligned_cols=253 Identities=24% Similarity=0.391 Sum_probs=213.5
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeecc
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYME 202 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~ 202 (495)
+.||+|+||.||+|++..+|+.||+|++.+... .......+.+|+.+|+.++||||+++++++.. ...+|+||||+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~lv~Ey~~ 78 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT--KDRLCFVMEYVN 78 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc--CCEEEEEEeCCC
Confidence 369999999999999999999999999986533 33455678899999999999999999999887 568999999999
Q ss_pred CChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccccc
Q 011041 203 HDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVV 282 (495)
Q Consensus 203 ~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g 282 (495)
++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++...... .......+|
T Consensus 79 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~~~g 157 (328)
T cd05593 79 GGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATMKTFCG 157 (328)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc-ccccccccC
Confidence 8777666666668999999999999999999999999999999999999999999999999998754322 122345679
Q ss_pred cCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCccc
Q 011041 283 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSY 362 (495)
Q Consensus 283 t~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 362 (495)
|+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+....+....
T Consensus 158 t~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~------------------------- 211 (328)
T cd05593 158 TPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED------------------------- 211 (328)
T ss_pred CcCccChhhhcC-CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC-------------------------
Confidence 999999999876 568999999999999999999999999887766665553210
Q ss_pred ccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCC
Q 011041 363 KRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPY 409 (495)
Q Consensus 363 ~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~ 409 (495)
......+++++.+||.+||..||.+|+ ++.++++||||....|
T Consensus 212 ----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~ 259 (328)
T cd05593 212 ----IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNW 259 (328)
T ss_pred ----ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 011234678899999999999999997 8999999999987554
No 71
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.1e-46 Score=369.41 Aligned_cols=284 Identities=41% Similarity=0.689 Sum_probs=237.0
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|++.+.||+|+||.||+|++..+|..||+|++............+.+|+.+++.++|+||+++++++.. ....|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH--GSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec--CCeeEEEe
Confidence 5899999999999999999999999999999998765545556778899999999999999999999987 56899999
Q ss_pred eeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCc
Q 011041 199 KYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMT 278 (495)
Q Consensus 199 e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~ 278 (495)
||+.+++...+......+++.+++.++.||+.+|.|||++||+|+||||+||+++.++.++|+|||++............
T Consensus 79 e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (286)
T cd07832 79 EYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS 158 (286)
T ss_pred cccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence 99966666665555567999999999999999999999999999999999999999999999999999876544323344
Q ss_pred cccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC-CCcc-C
Q 011041 279 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP-HATI-F 356 (495)
Q Consensus 279 ~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~-~~~~-~ 356 (495)
...++.+|+|||++.+...++.++|||||||++|+|++|.++|.+.++.+.+..+....+.+....|+..... .... .
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07832 159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKIT 238 (286)
T ss_pred cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhccc
Confidence 5678999999999877666789999999999999999999999999999999999999998888777653211 1100 0
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
.+... ...+...+.+.+.++.+||.+||..||.+|||+.++|+||||.
T Consensus 239 ~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 239 FPESK-PIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CCCCC-cchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 11111 1112344556778899999999999999999999999999995
No 72
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.3e-47 Score=383.41 Aligned_cols=253 Identities=26% Similarity=0.397 Sum_probs=214.1
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeecc
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYME 202 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~ 202 (495)
+.||+|+||.||++++..+|..||+|++..... .......+.+|+.+++.++||||+++++++.. ...+|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~--~~~~~lv~E~~~ 78 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT--HDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec--CCEEEEEEeCCC
Confidence 369999999999999999999999999986532 33455677789999999999999999999987 568999999999
Q ss_pred CChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccccc
Q 011041 203 HDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVV 282 (495)
Q Consensus 203 ~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g 282 (495)
++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+|
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~g 157 (323)
T cd05595 79 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKTFCG 157 (323)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-CccccccC
Confidence 87776666556679999999999999999999999999999999999999999999999999987532221 22345679
Q ss_pred cCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCccc
Q 011041 283 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSY 362 (495)
Q Consensus 283 t~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 362 (495)
|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.......+.....
T Consensus 158 t~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~------------------------ 212 (323)
T cd05595 158 TPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI------------------------ 212 (323)
T ss_pred CcCcCCcccccC-CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC------------------------
Confidence 999999999876 5689999999999999999999999998887776666542110
Q ss_pred ccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCC
Q 011041 363 KRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPY 409 (495)
Q Consensus 363 ~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~ 409 (495)
.....+++++.+||.+||..||.+|+ ++.++++|+||....|
T Consensus 213 -----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~ 259 (323)
T cd05595 213 -----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 259 (323)
T ss_pred -----CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence 11234678899999999999999998 8999999999997655
No 73
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.5e-47 Score=389.60 Aligned_cols=264 Identities=32% Similarity=0.452 Sum_probs=221.4
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|.+++.||+|+||.||+|++..+|+.||||++.+... .......+.+|+.++..++|+||+++++++.+ ...+|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD--EEHLYL 78 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec--CCeEEE
Confidence 479999999999999999999999999999999986543 22455678899999999999999999999987 568999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC---
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH--- 273 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~--- 273 (495)
||||+.++.+..+......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++.......
T Consensus 79 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 79 VMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 99999876555555445689999999999999999999999999999999999999999999999999998664432
Q ss_pred -------------------------CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q 011041 274 -------------------------KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVE 328 (495)
Q Consensus 274 -------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~ 328 (495)
.......+||+.|+|||++.+ ..++.++|||||||+||+|++|.+||.+.+..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~ 237 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE 237 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcC-CCCCCceeeEecchhhhhhccCCCCCCCCCHHH
Confidence 112344578999999999876 478999999999999999999999999988777
Q ss_pred HHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC-HHHHHhCCCCCCC
Q 011041 329 QLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT-ATAALRSEFFTTK 407 (495)
Q Consensus 329 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-a~elL~hp~f~~~ 407 (495)
...++........ ......+++++.+||..||. ||.+|++ +.++|+||||...
T Consensus 238 ~~~~i~~~~~~~~-------------------------~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 238 TYNKIINWKESLR-------------------------FPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred HHHHHhccCCccc-------------------------CCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 7777654211110 00112368889999999997 9999999 9999999999986
Q ss_pred CCC
Q 011041 408 PYA 410 (495)
Q Consensus 408 ~~~ 410 (495)
.|.
T Consensus 292 ~~~ 294 (350)
T cd05573 292 DWE 294 (350)
T ss_pred CHH
Confidence 653
No 74
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.3e-47 Score=381.43 Aligned_cols=251 Identities=28% Similarity=0.418 Sum_probs=212.0
Q ss_pred ecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCC
Q 011041 126 IGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHD 204 (495)
Q Consensus 126 LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~ 204 (495)
||+|+||.||+|++..+++.||+|++..... .......+.+|+.+|..++||||+++++++.. ...+|+||||+.++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~g 78 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS--PEKLYLVLAFINGG 78 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec--CCeEEEEEcCCCCC
Confidence 7999999999999999999999999975432 34455677889999999999999999999887 56899999999987
Q ss_pred hhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccccccC
Q 011041 205 LAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVVTL 284 (495)
Q Consensus 205 l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~ 284 (495)
.+.........+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......+||+
T Consensus 79 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~ 157 (312)
T cd05585 79 ELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNTFCGTP 157 (312)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-CccccccCCc
Confidence 776666556679999999999999999999999999999999999999999999999999987543222 2234567999
Q ss_pred CCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCccccc
Q 011041 285 WYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKR 364 (495)
Q Consensus 285 ~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (495)
.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+.....
T Consensus 158 ~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~-------------------------- 210 (312)
T cd05585 158 EYLAPELLLG-HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL-------------------------- 210 (312)
T ss_pred ccCCHHHHcC-CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC--------------------------
Confidence 9999999876 5689999999999999999999999998887776666543110
Q ss_pred ccccccCCCCCCcHHHHHHhccCCCCCcc---CHHHHHhCCCCCCCCC
Q 011041 365 CIAETFKDFPPSSLPLIETLLAIDPAERQ---TATAALRSEFFTTKPY 409 (495)
Q Consensus 365 ~~~~~~~~~s~~~~~Li~~~L~~dP~~R~---ta~elL~hp~f~~~~~ 409 (495)
.....+++++.+||.+||..||.+|+ ++.++|.||||....+
T Consensus 211 ---~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~ 255 (312)
T cd05585 211 ---RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSW 255 (312)
T ss_pred ---CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCH
Confidence 11234678899999999999999997 5899999999987533
No 75
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.8e-47 Score=385.10 Aligned_cols=260 Identities=28% Similarity=0.416 Sum_probs=211.8
Q ss_pred CeeeeeeecccCceEEEEEEEC---CCCeEEEeEEEecCCC--ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCc
Q 011041 119 TFEKLDKIGQGTYSNVYKARDT---LTGQIVALKKVRFDNL--EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~---~~g~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 192 (495)
+|++++.||+|+||.||++++. .+|..||+|++.+... .....+.+.+|+.+++.+ +|+||+++++++.. ..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~--~~ 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT--EA 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec--CC
Confidence 4899999999999999999864 5789999999975432 223455678899999999 59999999998877 56
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.+|+||||+.++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++..+...
T Consensus 79 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 79 KLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 79999999998766655555567999999999999999999999999999999999999999999999999999866443
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHhcCCCChhhhhhC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEV----EQLHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~----~~~~~i~~~~g~~~~~~~~~~ 348 (495)
........+||+.|+|||++.+...++.++|||||||++|+|++|..||...... .....+....
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~----------- 227 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD----------- 227 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC-----------
Confidence 3333345689999999999877556889999999999999999999999754322 2222221100
Q ss_pred CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCC
Q 011041 349 KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPY 409 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~ 409 (495)
......+++.+.+||.+||..||.+|+ +++++++||||+...|
T Consensus 228 ------------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~ 275 (332)
T cd05614 228 ------------------PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDW 275 (332)
T ss_pred ------------------CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 011234677889999999999999999 8999999999997554
No 76
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-49 Score=386.13 Aligned_cols=256 Identities=26% Similarity=0.439 Sum_probs=222.2
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
..|..++.||+|+||.||+|.+..+++.||||+++.+.. ...++.+++|+.+|..++++||.++|+.|.. +..++++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~-~deIediqqei~~Ls~~~~~~it~yygsyl~--g~~Lwii 89 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA-EDEIEDIQQEISVLSQCDSPNITEYYGSYLK--GTKLWII 89 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhc-chhhHHHHHHHHHHHhcCcchHHhhhhheee--cccHHHH
Confidence 468888999999999999999999999999999998754 4556889999999999999999999999987 6689999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
||||.|+.....+..+..+.|.++..++++++.||.|||..+.+|||||+.||||..+|.|||+|||.+..........
T Consensus 90 Mey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr- 168 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR- 168 (467)
T ss_pred HHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcc-
Confidence 9999998888777777777999999999999999999999999999999999999999999999999998776544333
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFK 357 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 357 (495)
.+++|||.||||||+.+ ..|+.++||||||++.+||++|.||+....+...+..|-+ .+++
T Consensus 169 ~tfvGTPfwMAPEVI~~-~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk---~~PP--------------- 229 (467)
T KOG0201|consen 169 KTFVGTPFWMAPEVIKQ-SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPK---SAPP--------------- 229 (467)
T ss_pred ccccccccccchhhhcc-ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccC---CCCC---------------
Confidence 78899999999999985 6799999999999999999999999987766333222211 0000
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
..-.++++.+++||..||.+||+.||+|.++|+|+|++.
T Consensus 230 ----------~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 230 ----------RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred ----------ccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 111268899999999999999999999999999999986
No 77
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-47 Score=359.57 Aligned_cols=258 Identities=22% Similarity=0.288 Sum_probs=218.1
Q ss_pred CCCeeee-eeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccC--Cc
Q 011041 117 ADTFEKL-DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRM--SC 192 (495)
Q Consensus 117 ~~~y~~~-~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~--~~ 192 (495)
.++|.+- ++||-|-.|.|..|.++.||+.+|+|++.- ....++|+++.-.. .|||||.++++|++.. ..
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-------SPKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 4778776 569999999999999999999999999752 24567888887766 6999999999997632 34
Q ss_pred eeEEEEeeccCChhhhhhCCCC--CCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC---CCcEEEeeccccc
Q 011041 193 SLYLVFKYMEHDLAGLAASPTI--KFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN---EGILTIADFGLAS 267 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~--~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~---~~~vkL~DFG~a~ 267 (495)
.+.+|||+|+|+.+...++..+ .|+|.++..|++||..|+.|||+++|.||||||||+|+.. +..+||+|||+|+
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK 212 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK 212 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccc
Confidence 6889999999987776665444 4999999999999999999999999999999999999975 4579999999998
Q ss_pred ccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHhcCCCChh
Q 011041 268 FFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTE----VEQLHKIFKLCGSPSEE 343 (495)
Q Consensus 268 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~----~~~~~~i~~~~g~~~~~ 343 (495)
.-.. ...+.+.+-||+|.|||++. ...|+...|+||||||+|.||||+|||+.... .+.-.+|......++.+
T Consensus 213 ~t~~--~~~L~TPc~TPyYvaPevlg-~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~p 289 (400)
T KOG0604|consen 213 ETQE--PGDLMTPCFTPYYVAPEVLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEP 289 (400)
T ss_pred ccCC--CccccCCcccccccCHHHhC-chhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCCh
Confidence 7553 24467778999999999875 46799999999999999999999999986543 34556777777777777
Q ss_pred hhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCC
Q 011041 344 YWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPY 409 (495)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~ 409 (495)
.|.. +|++++|||+.||..+|.+|+|+.+++.|||+++.+.
T Consensus 290 EWs~-------------------------VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~ 330 (400)
T KOG0604|consen 290 EWSC-------------------------VSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEA 330 (400)
T ss_pred hHhH-------------------------HHHHHHHHHHHHhcCCchhheeHHHhhcCchhccccc
Confidence 7754 7888999999999999999999999999999997543
No 78
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=6.8e-46 Score=378.40 Aligned_cols=261 Identities=28% Similarity=0.388 Sum_probs=209.4
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
..++|++++.||+|+||.||+|++..+|+.||||++.... .......+.+|+.+|+.++|+||+++++++.. ...+|
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~ 148 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDH--NGEIQ 148 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEecc--CCeEE
Confidence 3578999999999999999999999999999999986543 33445678899999999999999999999977 56799
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+||||+.++.+.. ...+.+..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++..+.... .
T Consensus 149 lv~e~~~~~~L~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~ 223 (353)
T PLN00034 149 VLLEFMDGGSLEG----THIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-D 223 (353)
T ss_pred EEEecCCCCcccc----cccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc-c
Confidence 9999999876532 2346788889999999999999999999999999999999999999999999998764322 2
Q ss_pred CCccccccCCCCCcccccC----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 276 PMTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~----~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
.....+||..|+|||++.. ...++.++|||||||++|||++|+.||......+....+.......
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~----------- 292 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ----------- 292 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC-----------
Confidence 2345689999999998743 1234578999999999999999999998543322222221111000
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPY 409 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~ 409 (495)
.......++.++.+||.+||..||++|||+.|+|+||||.....
T Consensus 293 --------------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 293 --------------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred --------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence 01112356788999999999999999999999999999997543
No 79
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.6e-47 Score=386.56 Aligned_cols=265 Identities=26% Similarity=0.362 Sum_probs=220.1
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|.+.+.||+|+||.||+|+++.+|+.||||++.+... .......+.+|+.+++.++|+||+++++++.+ ...+|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~--~~~~~l 78 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD--KDNLYL 78 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec--CCeEEE
Confidence 469999999999999999999999999999999986543 33455678899999999999999999999887 567999
Q ss_pred EEeeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 197 VFKYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 197 v~e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
||||+.++.+..+. .....+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++..+......
T Consensus 79 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 158 (330)
T cd05601 79 VMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV 158 (330)
T ss_pred EECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce
Confidence 99999876555444 33367999999999999999999999999999999999999999999999999999876543332
Q ss_pred CCccccccCCCCCcccccC-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 276 PMTSRVVTLWYRPPELLLG-----ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~-----~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
......||+.|+|||++.+ ...++.++|||||||++|+|++|..||.+.+....+.++........
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~--------- 229 (330)
T cd05601 159 NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLK--------- 229 (330)
T ss_pred eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccC---------
Confidence 2234578999999999863 34578999999999999999999999999888777777654211000
Q ss_pred CCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCCC
Q 011041 351 PHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPYA 410 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~~ 410 (495)
......+++++.+||..||. ||.+|+|+.+++.||||....|.
T Consensus 230 ----------------~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~~ 272 (330)
T cd05601 230 ----------------FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDWN 272 (330)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCHH
Confidence 00112467889999999998 99999999999999999976554
No 80
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=5.4e-47 Score=388.82 Aligned_cols=267 Identities=24% Similarity=0.336 Sum_probs=219.8
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
..++|++.+.||+|+||.||++++..+++.||+|++.+... .......+.+|+.+++.++||||+++++++.+ +..+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~--~~~~ 118 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD--DKYL 118 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc--CCEE
Confidence 35789999999999999999999999999999999975432 33345567889999999999999999999987 5689
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
|+||||+.++.+..+... ..+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++........
T Consensus 119 ~lv~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~ 197 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 197 (370)
T ss_pred EEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCc
Confidence 999999987655555443 3689999999999999999999999999999999999999999999999999987654332
Q ss_pred CCCccccccCCCCCcccccCC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGA---TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~---~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
......+||+.|+|||++.+. ..++.++|||||||+||+|++|.+||.+.+....+.+|........ |
T Consensus 198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~------ 268 (370)
T cd05621 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLN---F------ 268 (370)
T ss_pred eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccC---C------
Confidence 233456899999999998653 2378899999999999999999999999888887777754321111 0
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCC--ccCHHHHHhCCCCCCCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAE--RQTATAALRSEFFTTKPYA 410 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~--R~ta~elL~hp~f~~~~~~ 410 (495)
.....++..+.+||..||..++.+ |+|+.++++||||+...|.
T Consensus 269 ----------------p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~~~ 313 (370)
T cd05621 269 ----------------PEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWN 313 (370)
T ss_pred ----------------CCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCCCcC
Confidence 001246788999999999865544 8999999999999986553
No 81
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.4e-47 Score=388.98 Aligned_cols=264 Identities=27% Similarity=0.375 Sum_probs=218.5
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++++.||+|+||.||+|++..+++.||||++..... .......+.+|+.++..++|+||+++++.+.+ ...+|+
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~--~~~~~l 78 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD--KRNLYL 78 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc--CCEEEE
Confidence 479999999999999999999999999999999975432 34455678899999999999999999999887 568999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC--
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK-- 274 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~-- 274 (495)
||||+.++.+..+......+++..++.++.||+.||+|||++||+||||||+||||+.+|.+||+|||++........
T Consensus 79 v~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 79 IMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred EEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999876666665566799999999999999999999999999999999999999999999999999875432110
Q ss_pred --------------------------------CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 011041 275 --------------------------------QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMP 322 (495)
Q Consensus 275 --------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~ 322 (495)
......+||+.|+|||++.+ ..|+.++|||||||++|||++|.+||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC-CCCCCcceeccccceeeecccCCCCCC
Confidence 01124579999999999876 568999999999999999999999999
Q ss_pred CCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCcc---CHHHHH
Q 011041 323 GRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQ---TATAAL 399 (495)
Q Consensus 323 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~---ta~elL 399 (495)
+.+..+.+.++........ + .....+++++.+||.+|+ .||.+|+ ++.+++
T Consensus 238 ~~~~~~~~~~i~~~~~~~~--------------~-----------p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~ 291 (360)
T cd05627 238 SETPQETYRKVMNWKETLV--------------F-----------PPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIK 291 (360)
T ss_pred CCCHHHHHHHHHcCCCcee--------------c-----------CCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHh
Confidence 9888887777653211000 0 001136778999999987 4999998 489999
Q ss_pred hCCCCCCCCCC
Q 011041 400 RSEFFTTKPYA 410 (495)
Q Consensus 400 ~hp~f~~~~~~ 410 (495)
+||||.+..|.
T Consensus 292 ~hp~f~~~~~~ 302 (360)
T cd05627 292 SHPFFEGVDWG 302 (360)
T ss_pred cCCCCCCCCHH
Confidence 99999987664
No 82
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=5.1e-46 Score=372.78 Aligned_cols=278 Identities=36% Similarity=0.652 Sum_probs=215.3
Q ss_pred eeeecccCceEEEEEEECC--CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEee
Q 011041 123 LDKIGQGTYSNVYKARDTL--TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKY 200 (495)
Q Consensus 123 ~~~LG~G~~g~Vy~a~~~~--~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~ 200 (495)
..+||+|+||.||+|+++. ++..||+|.+...... ..+.+|+.+|+.++||||+++++++....+..+|+||||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS----MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc----HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 3579999999999999654 6688999998754322 346789999999999999999999876556789999999
Q ss_pred ccCChhhhhhC--------CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeee----CCCCcEEEeecccccc
Q 011041 201 MEHDLAGLAAS--------PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLI----DNEGILTIADFGLASF 268 (495)
Q Consensus 201 ~~~~l~~~~~~--------~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl----~~~~~vkL~DFG~a~~ 268 (495)
+++++...+.. ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 82 AEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred eCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 99987765431 12358999999999999999999999999999999999999 4567999999999987
Q ss_pred cCCCCC--CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHhc
Q 011041 269 FDPNHK--QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTE---------VEQLHKIFKLC 337 (495)
Q Consensus 269 ~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~---------~~~~~~i~~~~ 337 (495)
+..... ......+||+.|+|||++.+...++.++|||||||++|||++|.+||....+ ..++..++..+
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 643321 1234557899999999987766789999999999999999999999986442 45677888888
Q ss_pred CCCChhhhhhCC-CCCCcc----C----CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 338 GSPSEEYWKKSK-LPHATI----F----KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 338 g~~~~~~~~~~~-~~~~~~----~----~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
+.+....|.... .+.... + .................+..+.+||.+||+.||.+|||+.|+|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 888887776532 111000 0 000011111111112234568899999999999999999999999998
No 83
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.3e-46 Score=380.29 Aligned_cols=268 Identities=23% Similarity=0.304 Sum_probs=217.9
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++++.||+|+||.||++++..+++.||+|++.+... .......+.+|+.++..++|+||+++++++.+ ...+|+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD--ENNLYL 78 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec--CCeEEE
Confidence 479999999999999999999999999999999975322 33445668889999999999999999999987 568999
Q ss_pred EEeeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 197 VFKYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 197 v~e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
||||+.++.+..+. .....+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++..+......
T Consensus 79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 158 (331)
T cd05597 79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV 158 (331)
T ss_pred EEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc
Confidence 99999875554443 33557999999999999999999999999999999999999999999999999998766443322
Q ss_pred CCccccccCCCCCcccccC----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 276 PMTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~----~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
.....+||+.|+|||++.+ ...++.++|||||||++|+|++|+.||.+.+..+.+..+........
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~---------- 228 (331)
T cd05597 159 QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ---------- 228 (331)
T ss_pred cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc----------
Confidence 2233579999999999863 24578899999999999999999999998887777776643211110
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCC--ccCHHHHHhCCCCCCCCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAE--RQTATAALRSEFFTTKPYAC 411 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~--R~ta~elL~hp~f~~~~~~~ 411 (495)
+......+++++.+||.+||..++.+ |+++.++|+||||....|..
T Consensus 229 --------------~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~~~ 276 (331)
T cd05597 229 --------------FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGIDWDN 276 (331)
T ss_pred --------------CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCCHHH
Confidence 11112347888999999999765554 78999999999998866543
No 84
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-47 Score=362.37 Aligned_cols=262 Identities=24% Similarity=0.394 Sum_probs=233.4
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
.+++|+.+++||+|.||.|-+|+.+.+|+.||||+++++-. ..+.+.....|-++|+..+||.+..|...|.. ...+
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt--~drl 243 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT--QDRL 243 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc--CceE
Confidence 46899999999999999999999999999999999988765 66677778889999999999999998777766 5689
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
|+||||..|+.+...+.....|+|..++.|-..|+.||.|||+++||+||||.+|+|+|.||++||+|||+++.-- ...
T Consensus 244 CFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-~~g 322 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI-KYG 322 (516)
T ss_pred EEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcc-ccc
Confidence 9999999999988888888899999999999999999999999999999999999999999999999999997532 233
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
....+.||||.|+|||++.. ..|+.++|+|.+||++|||+||+.||+..+....+..|+-.--
T Consensus 323 ~t~kTFCGTPEYLAPEVleD-nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~---------------- 385 (516)
T KOG0690|consen 323 DTTKTFCGTPEYLAPEVLED-NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL---------------- 385 (516)
T ss_pred ceeccccCChhhcCchhhcc-ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc----------------
Confidence 45678899999999999875 6899999999999999999999999999999888888764321
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC-----HHHHHhCCCCCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT-----ATAALRSEFFTTKPYA 410 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----a~elL~hp~f~~~~~~ 410 (495)
.....++++++.||..+|.+||.+|+. |.|+.+|+||.+..|.
T Consensus 386 -------------kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~ 433 (516)
T KOG0690|consen 386 -------------KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWE 433 (516)
T ss_pred -------------cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHH
Confidence 223468899999999999999999964 8999999999988774
No 85
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.8e-46 Score=378.03 Aligned_cols=258 Identities=25% Similarity=0.366 Sum_probs=216.0
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCC-CeeeeeceeeccCCceeEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHP-NVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~Hp-nIv~l~~~~~~~~~~~~~l 196 (495)
+|++++.||+|+||.||+|++..+++.||||++.+... .....+.+..|+.++..++|+ +|+.+++++.. ...+|+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT--MDRLYF 78 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc--CCEEEE
Confidence 58999999999999999999999999999999986532 334456778899999999765 58889888877 567999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+.++.+.........+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ..
T Consensus 79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~ 157 (324)
T cd05587 79 VMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG-KT 157 (324)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC-Cc
Confidence 99999987666666556679999999999999999999999999999999999999999999999999986532221 22
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+.....
T Consensus 158 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~------------------ 218 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV------------------ 218 (324)
T ss_pred eeeecCCccccChhhhcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC------------------
Confidence 345579999999999876 5689999999999999999999999999888877777653211
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCH-----HHHHhCCCCCCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTA-----TAALRSEFFTTKPY 409 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta-----~elL~hp~f~~~~~ 409 (495)
.....+++++.+||.+||..||.+|++. .++++||||....|
T Consensus 219 -----------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~ 265 (324)
T cd05587 219 -----------SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDW 265 (324)
T ss_pred -----------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 1113467788999999999999999986 89999999987544
No 86
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.2e-45 Score=366.90 Aligned_cols=288 Identities=43% Similarity=0.746 Sum_probs=235.0
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCC---hHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLE---PESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
+|++.+.||+|+||.||+|.+..+|+.||||.+...... ......+..|+.+++.++|+||+++++++.+ ...+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~ 78 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH--KSNIN 78 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec--CCEEE
Confidence 488999999999999999999999999999999865443 3334567789999999999999999999987 56899
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+||||+.+++...+......+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++....... .
T Consensus 79 lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-~ 157 (298)
T cd07841 79 LVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN-R 157 (298)
T ss_pred EEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC-c
Confidence 999999666665554443479999999999999999999999999999999999999999999999999998765432 2
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC-CCCCc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK-LPHAT 354 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~-~~~~~ 354 (495)
......+++.|+|||.+.+...++.++|||||||++|+|++|.++|.+.++.+.+.++...++.+....|.... ++...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (298)
T cd07841 158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV 237 (298)
T ss_pred cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccc
Confidence 22344668899999988765678899999999999999999999999999989999998888888877775422 11111
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPYAC 411 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~~~ 411 (495)
.. .......+...+..++..+.+||.+||.+||.+|||+.++|+|+||++.+.+.
T Consensus 238 ~~--~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~ 292 (298)
T cd07841 238 EF--KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPT 292 (298)
T ss_pred cc--cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCC
Confidence 11 00011112334456678899999999999999999999999999999876554
No 87
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.5e-46 Score=377.08 Aligned_cols=256 Identities=25% Similarity=0.368 Sum_probs=213.6
Q ss_pred eeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHH---HhCCCCCeeeeeceeeccCCceeE
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILIL---RRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il---~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
|++++.||+|+||.||+|.+..+|+.||||++.+... .....+.+.+|+.++ +.++||||+++++++.+ ...+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~--~~~~~ 78 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT--EDHVC 78 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc--CCEEE
Confidence 7889999999999999999999999999999986432 233455677777665 45689999999999987 56899
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+||||+.++.+...... ..+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... .
T Consensus 79 lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-~ 156 (324)
T cd05589 79 FVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG-D 156 (324)
T ss_pred EEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC-C
Confidence 99999998766655543 469999999999999999999999999999999999999999999999999987543222 2
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
.....+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+.....
T Consensus 157 ~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~----------------- 218 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV----------------- 218 (324)
T ss_pred cccccccCccccCHhHhcC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----------------
Confidence 2345679999999998876 5689999999999999999999999999888877777654211
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPY 409 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~ 409 (495)
.....+++.+.+||.+||+.||.+|| ++.++++||||....|
T Consensus 219 ------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~ 265 (324)
T cd05589 219 ------------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINW 265 (324)
T ss_pred ------------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCH
Confidence 01134678889999999999999999 7999999999987544
No 88
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.4e-47 Score=383.22 Aligned_cols=258 Identities=26% Similarity=0.448 Sum_probs=231.9
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.+.|..++.+|+|+||.+++++++..+..|++|.|..........+...+|+.+++++.|||||.+.+.|+.. ++.++|
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~-~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED-GQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC-CceEEE
Confidence 5789999999999999999999999999999999999887666667888999999999999999999999874 566999
Q ss_pred EEeeccCChhhhhh-C-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEHDLAGLAA-S-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~~l~~~~~-~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
||+|++|+.+...+ . ++..|+|+.+..|+.||+.||.|||+++|+|||||+.|||++.++.|||+|||+|+...+..
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~- 160 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED- 160 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-
Confidence 99999987666544 3 34689999999999999999999999999999999999999999999999999999987654
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
....+.+||+.|++||++.+ .+|+.++|||||||++|||++-++.|.+.+-.....+|++....|-+
T Consensus 161 ~~a~tvvGTp~YmcPEil~d-~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp------------ 227 (426)
T KOG0589|consen 161 SLASTVVGTPYYMCPEILSD-IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP------------ 227 (426)
T ss_pred hhhheecCCCcccCHHHhCC-CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC------------
Confidence 34567899999999998876 78999999999999999999999999999999999999887654433
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
..++.++..||+.||..+|..||++.++|.+|.+.
T Consensus 228 ----------------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 228 ----------------SMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred ----------------ccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 34677889999999999999999999999998876
No 89
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=6.1e-46 Score=368.25 Aligned_cols=287 Identities=45% Similarity=0.788 Sum_probs=236.5
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|++.+.||.|+||.||+|.+..+++.||+|.+............+.+|+.+++.++||||+++++++........|+
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 46899999999999999999999999999999999865544333445678999999999999999999987754478999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+.+++...+......+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++..+.... ..
T Consensus 84 v~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~ 162 (293)
T cd07843 84 VMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL-KP 162 (293)
T ss_pred EehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc-cc
Confidence 99999987777666555579999999999999999999999999999999999999999999999999998765432 22
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC-CCCCcc
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK-LPHATI 355 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~-~~~~~~ 355 (495)
.....+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+.++...++.+....|.... ++....
T Consensus 163 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (293)
T cd07843 163 YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKK 242 (293)
T ss_pred cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcc
Confidence 3445678999999998765567899999999999999999999999999999999999999999888887532 222211
Q ss_pred CCCCcccccccccccCC--CCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 356 FKPQQSYKRCIAETFKD--FPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~--~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
..........+...+.. +++.+.+||.+||+.||++|||+.|+|.||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 243 KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred cccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 11111111122333444 47889999999999999999999999999998
No 90
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.2e-46 Score=378.88 Aligned_cols=253 Identities=24% Similarity=0.372 Sum_probs=212.6
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
+.||+|+||.||+|+++.+++.||||++.+... .......+..|+.++..+ +||||+++++++.. ...+|+||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~--~~~~~iv~Ey~ 78 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT--PDRLFFVMEFV 78 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc--CCEEEEEEcCC
Confidence 369999999999999999999999999976432 234456677888888877 69999999999987 56799999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
.++.+.........+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+
T Consensus 79 ~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~~~~~~ 157 (320)
T cd05590 79 NGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KTTSTFC 157 (320)
T ss_pred CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Ccccccc
Confidence 987766666556689999999999999999999999999999999999999999999999999987543221 2234567
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQS 361 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (495)
||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+......
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~---------------------- 214 (320)
T cd05590 158 GTPDYIAPEILQE-MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV---------------------- 214 (320)
T ss_pred cCccccCHHHHcC-CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCC----------------------
Confidence 9999999998875 56899999999999999999999999999888877776532110
Q ss_pred cccccccccCCCCCCcHHHHHHhccCCCCCccCH------HHHHhCCCCCCCCC
Q 011041 362 YKRCIAETFKDFPPSSLPLIETLLAIDPAERQTA------TAALRSEFFTTKPY 409 (495)
Q Consensus 362 ~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta------~elL~hp~f~~~~~ 409 (495)
....+++++.+||.+||+.||.+|+++ +++++||||....|
T Consensus 215 -------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~ 261 (320)
T cd05590 215 -------YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDW 261 (320)
T ss_pred -------CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence 112367788999999999999999998 99999999987554
No 91
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=7.3e-47 Score=381.14 Aligned_cols=253 Identities=24% Similarity=0.382 Sum_probs=212.7
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeecc
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYME 202 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~ 202 (495)
+.||+|+||.||+|++..+|..||+|++.+... .......+.+|+.+++.++||||+++++++.. ...+|+||||+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~--~~~~~lv~E~~~ 78 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT--HDRLCFVMEYAN 78 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc--CCEEEEEEeCCC
Confidence 369999999999999999999999999986533 23445667789999999999999999999887 568999999999
Q ss_pred CChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 203 HDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 203 ~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
++.+.........+++..++.++.||+.||.|||+ +||+||||||+||||+.++.+||+|||++....... ......+
T Consensus 79 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~ 157 (325)
T cd05594 79 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-ATMKTFC 157 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-ccccccc
Confidence 88776666666689999999999999999999997 899999999999999999999999999987543221 2234567
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQS 361 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (495)
||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+....+..+.....
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~----------------------- 213 (325)
T cd05594 158 GTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI----------------------- 213 (325)
T ss_pred CCcccCCHHHHcc-CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC-----------------------
Confidence 9999999999876 5689999999999999999999999998887766665532110
Q ss_pred cccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCC
Q 011041 362 YKRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPY 409 (495)
Q Consensus 362 ~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~ 409 (495)
.....+++++.+||.+||..||.+|+ ++.++|+||||....|
T Consensus 214 ------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~ 260 (325)
T cd05594 214 ------RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVW 260 (325)
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCH
Confidence 01134678899999999999999997 9999999999987544
No 92
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-48 Score=413.40 Aligned_cols=265 Identities=26% Similarity=0.325 Sum_probs=231.6
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
.++|.+++.||+|+||.|.+++++.|++.||+|++.+-.. .......|..|-.||..-+.+-|+.++-.|.+ +.++|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD--~~~LY 151 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD--ERYLY 151 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC--ccceE
Confidence 5899999999999999999999999999999999987443 34556788899999999999999999999988 67899
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+|||||.||.+-.+.....+++|.-++.|+..|+.||+-||+.|+|||||||+|||||..|+|||+|||.+-.++..+.-
T Consensus 152 lVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V 231 (1317)
T KOG0612|consen 152 LVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTV 231 (1317)
T ss_pred EEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcE
Confidence 99999987654444444448999999999999999999999999999999999999999999999999999888766655
Q ss_pred CCccccccCCCCCcccccC----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc--CCCChhhhhhCC
Q 011041 276 PMTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLC--GSPSEEYWKKSK 349 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~----~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~--g~~~~~~~~~~~ 349 (495)
.....||||.|++||+|.. ...||+.+|+|||||++|||++|..||+..+-.+.+.+|+... ..+|+
T Consensus 232 ~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~------- 304 (1317)
T KOG0612|consen 232 RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPD------- 304 (1317)
T ss_pred EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCc-------
Confidence 5667899999999999842 2569999999999999999999999999999999999998762 22221
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC---HHHHHhCCCCCCCCCCC
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT---ATAALRSEFFTTKPYAC 411 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t---a~elL~hp~f~~~~~~~ 411 (495)
..++|+++++||.++|+ +|..|+. ++++-.||||.+.+|..
T Consensus 305 --------------------~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~ 348 (1317)
T KOG0612|consen 305 --------------------ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDN 348 (1317)
T ss_pred --------------------ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhh
Confidence 13489999999999886 8999988 99999999999999843
No 93
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.6e-46 Score=374.32 Aligned_cols=283 Identities=23% Similarity=0.332 Sum_probs=216.7
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|++++.||+|+||.||++++..+|..||+|++.... .......+.+|+.+|+.++||||+++++++.. +..+|+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~l 80 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--DGEISI 80 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE--CCEEEE
Confidence 478999999999999999999999999999999997642 34455678999999999999999999999887 567999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhC-CceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQ-HVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~-givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
||||+.++.+..+......+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 157 (331)
T cd06649 81 CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 157 (331)
T ss_pred EeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc---
Confidence 999999877766666566799999999999999999999986 6999999999999999999999999998765332
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhC-CCCCC-
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKS-KLPHA- 353 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~-~~~~~- 353 (495)
......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+....+...........+... ..+..
T Consensus 158 ~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (331)
T cd06649 158 MANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPP 236 (331)
T ss_pred ccccCCCCcCcCCHhHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccc
Confidence 2244578999999999876 46899999999999999999999999877665443322111110001100000 00000
Q ss_pred -c-------cCCCCcccc---c-ccccc-----cCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 354 -T-------IFKPQQSYK---R-CIAET-----FKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 354 -~-------~~~~~~~~~---~-~~~~~-----~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
. ...+..... . .+... ...+++++.+||.+||.+||++|||+.++|+||||+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~ 306 (331)
T cd06649 237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKR 306 (331)
T ss_pred cccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhh
Confidence 0 000000000 0 00000 1235678999999999999999999999999999986
No 94
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.1e-45 Score=367.56 Aligned_cols=289 Identities=47% Similarity=0.864 Sum_probs=239.7
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC-----
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM----- 190 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----- 190 (495)
..++|++.+.||+|+||.||+|.++.+|+.||+|+++...........+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 457899999999999999999999999999999999765433334456778999999999999999999886632
Q ss_pred ---CceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeeccccc
Q 011041 191 ---SCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLAS 267 (495)
Q Consensus 191 ---~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~ 267 (495)
...+|+||||+++++...+......+++..+..++.||+.||.|||++||+|+||||+||++++++.+||+|||++.
T Consensus 85 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~ 164 (302)
T cd07864 85 KKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLAR 164 (302)
T ss_pred cccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccc
Confidence 23789999999998887776665679999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhh
Q 011041 268 FFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKK 347 (495)
Q Consensus 268 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 347 (495)
..............++..|+|||++.+...++.++|||||||++|+|++|++||...+..+.+..+.+.++.+....|+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (302)
T cd07864 165 LYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPD 244 (302)
T ss_pred cccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccc
Confidence 76544333334446688899999887655678999999999999999999999999999999999999999888777764
Q ss_pred CC-CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 348 SK-LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 348 ~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.. .+............+.+...+..+|..+.+||..||..||.+|||+.++|.||||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 245 VIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred ccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 32 1111111222222233445556688999999999999999999999999999997
No 95
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.3e-45 Score=368.30 Aligned_cols=288 Identities=47% Similarity=0.846 Sum_probs=235.7
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC------
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM------ 190 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------ 190 (495)
.++|++.+.||+|+||.||+|++..+++.||||++............+.+|+.+++.++|+||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 58999999999999999999999999999999998765433333345678999999999999999999875432
Q ss_pred CceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccC
Q 011041 191 SCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFD 270 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~ 270 (495)
...+|+||||+.+++...+......+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++....
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 166 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD 166 (311)
T ss_pred CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence 23589999999998888777666789999999999999999999999999999999999999999999999999997654
Q ss_pred CCCC----------CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Q 011041 271 PNHK----------QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSP 340 (495)
Q Consensus 271 ~~~~----------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~ 340 (495)
.... ...+...+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+.......+...++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 246 (311)
T cd07866 167 GPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTP 246 (311)
T ss_pred CCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 3221 112344678999999988765668999999999999999999999999999999999999999888
Q ss_pred ChhhhhhCC-CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 341 SEEYWKKSK-LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 341 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.+..|.... ++..............+...+..+++.+.+||.+||..||.+|||+.++|.||||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 247 TEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred ChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 877665432 1211111111112222334455677889999999999999999999999999998
No 96
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=6.7e-46 Score=365.92 Aligned_cols=282 Identities=41% Similarity=0.756 Sum_probs=229.5
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|++++.||.|+||.||+|++..+|..||||.+............+.+|+.++++++||||+++++++.+ ....|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT--ENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc--CCcEEEEe
Confidence 4889999999999999999999999999999987654444444578889999999999999999999876 56799999
Q ss_pred eeccCChhhhhhC-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 199 KYMEHDLAGLAAS-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 199 e~~~~~l~~~~~~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
||+.+++...+.. ....+++..+..++.||+.||+|||++|++|+||+|+||+++.++.+||+|||++....... ...
T Consensus 79 e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-~~~ 157 (284)
T cd07860 79 EFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTY 157 (284)
T ss_pred eccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc-ccc
Confidence 9998876665543 34578999999999999999999999999999999999999999999999999987654332 223
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC-CCCccC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL-PHATIF 356 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~-~~~~~~ 356 (495)
....+++.|+|||++.+...++.++|||||||++|+|++|+.||.+.++.+.+.++....+.+....|+.... +.....
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07860 158 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPS 237 (284)
T ss_pred ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhh
Confidence 3446788999999987755678899999999999999999999999999899999998888888776653211 100000
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.+. ............+++++.+||.+||+.||.+|||+.++|.||||
T Consensus 238 ~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 238 FPK-WARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred ccc-ccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 000 00111222334577889999999999999999999999999998
No 97
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.1e-46 Score=377.16 Aligned_cols=253 Identities=23% Similarity=0.350 Sum_probs=212.9
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
+.||+|+||.||+|++..+++.||||++.+... .......+..|+.++..+ +||||+++++++.+ ...+|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~--~~~~~lv~E~~ 78 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT--KDRLFFVMEYV 78 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc--CCeEEEEEeCC
Confidence 369999999999999999999999999986533 334455677899999876 79999999999987 56799999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
+++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~ 157 (321)
T cd05591 79 NGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VTTTTFC 157 (321)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCC-ccccccc
Confidence 987666655556679999999999999999999999999999999999999999999999999987543222 2234567
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQS 361 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (495)
||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+......
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~---------------------- 214 (321)
T cd05591 158 GTPDYIAPEILQE-LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVL---------------------- 214 (321)
T ss_pred cCccccCHHHHcC-CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC----------------------
Confidence 8999999998875 56899999999999999999999999999988888777542100
Q ss_pred cccccccccCCCCCCcHHHHHHhccCCCCCcc-------CHHHHHhCCCCCCCCC
Q 011041 362 YKRCIAETFKDFPPSSLPLIETLLAIDPAERQ-------TATAALRSEFFTTKPY 409 (495)
Q Consensus 362 ~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-------ta~elL~hp~f~~~~~ 409 (495)
....++.++.+||.+||+.||.+|+ ++.++++||||....|
T Consensus 215 -------~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~ 262 (321)
T cd05591 215 -------YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDW 262 (321)
T ss_pred -------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCH
Confidence 0123567889999999999999999 9999999999987554
No 98
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.4e-46 Score=375.09 Aligned_cols=258 Identities=23% Similarity=0.348 Sum_probs=216.2
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~l 196 (495)
+|.+++.||+|+||.||+|++..+++.||||++.+... .......+..|+.++..+ .|++|+++++++.+ ...+|+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT--MDRLYF 78 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec--CCEEEE
Confidence 58899999999999999999999999999999986533 233445567788888887 58999999999877 567999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+.++.+.........+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ..
T Consensus 79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~-~~ 157 (323)
T cd05616 79 VMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG-VT 157 (323)
T ss_pred EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC-Cc
Confidence 99999877666555555679999999999999999999999999999999999999999999999999987543221 22
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+......
T Consensus 158 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~----------------- 219 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA----------------- 219 (323)
T ss_pred cccCCCChhhcCHHHhcC-CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-----------------
Confidence 345678999999999876 56899999999999999999999999998888877776542111
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC-----HHHHHhCCCCCCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT-----ATAALRSEFFTTKPY 409 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----a~elL~hp~f~~~~~ 409 (495)
....+++++.+||.+||+.||.+|++ ..++++||||....|
T Consensus 220 ------------~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~ 265 (323)
T cd05616 220 ------------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW 265 (323)
T ss_pred ------------CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCH
Confidence 11346788999999999999999998 489999999987655
No 99
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.1e-46 Score=383.44 Aligned_cols=266 Identities=25% Similarity=0.340 Sum_probs=219.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
.++|++.+.||+|+||.||+|++..+++.||+|++.+... .......+.+|+.+++.++||||+++++++.+ ...+|
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~--~~~~~ 119 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD--DRYLY 119 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc--CCEEE
Confidence 5899999999999999999999999999999999975332 33345567889999999999999999999987 57899
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+||||+.++.+..+... ..+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++.........
T Consensus 120 lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~ 198 (371)
T cd05622 120 MVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 198 (371)
T ss_pred EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcc
Confidence 99999987665555443 35899999999999999999999999999999999999999999999999999876543322
Q ss_pred CCccccccCCCCCcccccCC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 276 PMTSRVVTLWYRPPELLLGA---TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~---~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
.....+||+.|+|||++.+. ..++.++|||||||++|+|++|.+||.+.+....+.+|........ +
T Consensus 199 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~------- 268 (371)
T cd05622 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT---F------- 268 (371)
T ss_pred cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCccc---C-------
Confidence 33456799999999998653 2378999999999999999999999999888877777754221110 0
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCC--ccCHHHHHhCCCCCCCCCC
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAE--RQTATAALRSEFFTTKPYA 410 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~--R~ta~elL~hp~f~~~~~~ 410 (495)
....+++..+.+||..||..++.+ |+++.++++|+||++..|.
T Consensus 269 ---------------~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~~~ 313 (371)
T cd05622 269 ---------------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA 313 (371)
T ss_pred ---------------CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCChh
Confidence 012357888999999999844443 7899999999999986653
No 100
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.3e-45 Score=361.20 Aligned_cols=281 Identities=37% Similarity=0.602 Sum_probs=227.4
Q ss_pred eeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCCceeEEEE
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLD-HPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
|++++.||+|+||.||+|.+..++..||+|++.......... ...+|+.++.++. |+||+++++++.+.....+++||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~-~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQV-NNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhh-hHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 678899999999999999999999999999987643332322 3447899999885 99999999999875447899999
Q ss_pred eeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCc
Q 011041 199 KYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMT 278 (495)
Q Consensus 199 e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~ 278 (495)
||++++++..+......+++..+..++.||+.||.|||++||+||||||+||+++. +.+||+|||++...... ....
T Consensus 80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~--~~~~ 156 (282)
T cd07831 80 ELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK--PPYT 156 (282)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC--CCcC
Confidence 99999888877665567999999999999999999999999999999999999999 99999999999866432 2223
Q ss_pred cccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCC
Q 011041 279 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKP 358 (495)
Q Consensus 279 ~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 358 (495)
...+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+....+....+.+....+..........+..
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 45689999999987655567899999999999999999999999999999999998888887765533222111111111
Q ss_pred CcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 359 QQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 359 ~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.......+......++.++.+||.+||..||.+|||+.++|+||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 1111111223334678999999999999999999999999999998
No 101
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4e-45 Score=360.33 Aligned_cols=283 Identities=34% Similarity=0.622 Sum_probs=227.4
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|++.+.||+|+||.||+|+++.+|+.||+|++..........+.+.+|+.+++.++|+||+++++++.. ...+|+|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR--KRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee--CCEEEEE
Confidence 47999999999999999999999999999999987554333334567889999999999999999999987 5679999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
|||++++++..+......+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++........ ..
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-~~ 157 (286)
T cd07847 79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-DY 157 (286)
T ss_pred EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc-cc
Confidence 99999998887776666799999999999999999999999999999999999999999999999999987654321 22
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhh---hhhCCCCCCc
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEY---WKKSKLPHAT 354 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~---~~~~~~~~~~ 354 (495)
....++..|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+....+...... |........
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 236 (286)
T cd07847 158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKG- 236 (286)
T ss_pred cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccc-
Confidence 3456789999999987766688999999999999999999999999888888777766655443321 111000000
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
...+.......+...+.+++..+.+||.+||..||++|||+.|+|.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 237 LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred ccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 00011000111223345678899999999999999999999999999998
No 102
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.9e-45 Score=362.88 Aligned_cols=284 Identities=38% Similarity=0.693 Sum_probs=227.9
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|++.+.||+|+||.||+|+++.+++.||||.+...... .....+.+|+.+++.++|+||+++++++.+ ....|+
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~l 80 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHT--KKTLTL 80 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEec--CCeEEE
Confidence 57899999999999999999999999999999998754322 122345689999999999999999999987 568999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+.+++...+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ..
T Consensus 81 v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-~~ 159 (291)
T cd07844 81 VFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-KT 159 (291)
T ss_pred EEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCC-cc
Confidence 99999988877666555578999999999999999999999999999999999999999999999999987543221 11
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCChhhhhhCCCCCC-c
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRT-EVEQLHKIFKLCGSPSEEYWKKSKLPHA-T 354 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~-~~~~~~~i~~~~g~~~~~~~~~~~~~~~-~ 354 (495)
.....++..|+|||++.+...++.++|||||||++|+|++|.+||.+.+ ..+.+..+.+..+.+....|........ .
T Consensus 160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07844 160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK 239 (291)
T ss_pred ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccc
Confidence 2333568899999998765668899999999999999999999998766 6677888888888888887765321110 0
Q ss_pred cCCCCcccccccccccCCCC--CCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFP--PSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s--~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
...........+......++ .++.+||.+||+.||.+|||+.++|+||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred cccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00000000111222333444 788999999999999999999999999998
No 103
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.5e-46 Score=375.09 Aligned_cols=254 Identities=26% Similarity=0.419 Sum_probs=211.8
Q ss_pred eeeecccCceEEEEEEEC---CCCeEEEeEEEecCCC--ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 123 LDKIGQGTYSNVYKARDT---LTGQIVALKKVRFDNL--EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 123 ~~~LG~G~~g~Vy~a~~~---~~g~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++.||+|+||.||+|++. .+++.||+|++..... .......+.+|+.+|+.++||||+++++++.. +..+|+|
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~--~~~~~lv 78 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT--GGKLYLI 78 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec--CCeEEEE
Confidence 367999999999999864 5789999999976432 22334567789999999999999999999987 5679999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
|||+.++.+.........+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ...
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 157 (323)
T cd05584 79 LEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-TVT 157 (323)
T ss_pred EeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-Ccc
Confidence 9999987776666666678999999999999999999999999999999999999999999999999987543222 223
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFK 357 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 357 (495)
...+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+....+..+.....
T Consensus 158 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~------------------- 217 (323)
T cd05584 158 HTFCGTIEYMAPEILMR-SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL------------------- 217 (323)
T ss_pred cccCCCccccChhhccC-CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-------------------
Confidence 44579999999999876 4678999999999999999999999999887777666643210
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPY 409 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~ 409 (495)
.....+++++.+||.+||..||.+|+ ++.++++||||....|
T Consensus 218 ----------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~ 264 (323)
T cd05584 218 ----------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNW 264 (323)
T ss_pred ----------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 11234677889999999999999999 8999999999987544
No 104
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=5.8e-46 Score=373.21 Aligned_cols=253 Identities=24% Similarity=0.376 Sum_probs=208.5
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
+.||+|+||.||+|++..+++.||||++..... .......+..|..++..+ +||||+++++++.. ...+|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~--~~~~~lv~e~~ 78 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT--KEHLFFVMEYL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc--CCEEEEEEcCC
Confidence 369999999999999999999999999986432 223344555677777654 89999999999877 56899999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
.++.+.........+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+
T Consensus 79 ~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~~~~ 157 (316)
T cd05592 79 NGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKASTFC 157 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Ccccccc
Confidence 887766666556679999999999999999999999999999999999999999999999999997643222 2334567
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQS 361 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (495)
||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.....
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~----------------------- 213 (316)
T cd05592 158 GTPDYIAPEILKG-QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRP----------------------- 213 (316)
T ss_pred CCccccCHHHHcC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-----------------------
Confidence 9999999999876 4689999999999999999999999999888777766643110
Q ss_pred cccccccccCCCCCCcHHHHHHhccCCCCCccCH-HHHHhCCCCCCCCC
Q 011041 362 YKRCIAETFKDFPPSSLPLIETLLAIDPAERQTA-TAALRSEFFTTKPY 409 (495)
Q Consensus 362 ~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta-~elL~hp~f~~~~~ 409 (495)
.....++.++.+||.+||..||.+|+++ .++++||||....|
T Consensus 214 ------~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~ 256 (316)
T cd05592 214 ------HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDW 256 (316)
T ss_pred ------CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCCH
Confidence 0112366788999999999999999986 58889999987554
No 105
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3e-45 Score=360.88 Aligned_cols=285 Identities=54% Similarity=0.964 Sum_probs=239.4
Q ss_pred eeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEe
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFK 199 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e 199 (495)
|++.+.||.|+||.||+|++..+|+.||+|++............+.+|+.+++.++|+||+++++++........|+|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 67899999999999999999999999999999876433344566788999999999999999999998743368999999
Q ss_pred eccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcc
Q 011041 200 YMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTS 279 (495)
Q Consensus 200 ~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~ 279 (495)
|+++++...+......+++..+..++.||+.||.|||+.|++|+||||+|||+++++.+||+|||++.............
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (287)
T cd07840 81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTN 160 (287)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccc
Confidence 99988877776665689999999999999999999999999999999999999999999999999998775543323445
Q ss_pred ccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC-CCCCccCCC
Q 011041 280 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK-LPHATIFKP 358 (495)
Q Consensus 280 ~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~ 358 (495)
..++..|+|||.+.+...++.++|||||||++|+|++|++||...+....+..+...++.+....|.... +.....+.+
T Consensus 161 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T cd07840 161 RVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKP 240 (287)
T ss_pred cccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccc
Confidence 5678899999988765668999999999999999999999999999999999999999988887776532 222222333
Q ss_pred CcccccccccccCCC-CCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 359 QQSYKRCIAETFKDF-PPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 359 ~~~~~~~~~~~~~~~-s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.......+...+... ++.+.++|.+||..||.+||++.+++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 241 KKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred cccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 333333344445554 8899999999999999999999999999998
No 106
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7e-47 Score=356.67 Aligned_cols=261 Identities=24% Similarity=0.341 Sum_probs=223.0
Q ss_pred CCeeee-eeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeE
Q 011041 118 DTFEKL-DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 118 ~~y~~~-~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~ 195 (495)
+-|++. +.||+|+|+.|-.|+...+|..||||+|.+.. ......+.||++++.+. .|+||+.|+++|++ +...|
T Consensus 77 d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd--d~~FY 152 (463)
T KOG0607|consen 77 DMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--GHSRSRVFREVETFYQCQGHKNILQLIEFFED--DTRFY 152 (463)
T ss_pred HHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC--chHHHHHHHHHHHHHHhcCCccHHHHHHHhcc--cceEE
Confidence 334443 57999999999999999999999999998763 44556788999999998 69999999999998 56799
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC---cEEEeecccccccCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG---ILTIADFGLASFFDPN 272 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~---~vkL~DFG~a~~~~~~ 272 (495)
||||-|.|+-+-..+.....|+|.++..++++|+.||+|||.+||.||||||||||..... -||||||.+..-+...
T Consensus 153 LVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~ 232 (463)
T KOG0607|consen 153 LVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLN 232 (463)
T ss_pred EEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccC
Confidence 9999999987767777778999999999999999999999999999999999999997654 4899999998654322
Q ss_pred ------CCCCCccccccCCCCCccccc----CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---------------hH
Q 011041 273 ------HKQPMTSRVVTLWYRPPELLL----GATDYGVGVDLWSAGCILAELLAEKPIMPGRT---------------EV 327 (495)
Q Consensus 273 ------~~~~~~~~~gt~~y~aPE~l~----~~~~~~~~~DvwSlGvil~elltG~~pf~~~~---------------~~ 327 (495)
......+.+|+..|||||+.. ....|+.+.|+||||||||.||+|++||.|.- ..
T Consensus 233 ~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~ 312 (463)
T KOG0607|consen 233 NDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN 312 (463)
T ss_pred CCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHH
Confidence 122345678999999999862 24569999999999999999999999998642 35
Q ss_pred HHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 328 EQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 328 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
..++.|......+++..|. ++|.+++|||..+|..|+..|.++.++|+|||++.-
T Consensus 313 ~LFesIQEGkYeFPdkdWa-------------------------hIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~ 367 (463)
T KOG0607|consen 313 KLFESIQEGKYEFPDKDWA-------------------------HISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRC 367 (463)
T ss_pred HHHHHHhccCCcCChhhhH-------------------------HhhHHHHHHHHHHHhccHHhhhhhhhccCCcccccc
Confidence 6678888888888887774 488999999999999999999999999999999863
No 107
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=6.6e-46 Score=375.33 Aligned_cols=266 Identities=22% Similarity=0.306 Sum_probs=216.7
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++++.||+|+||.||+++++.+++.||+|++.+... .......+.+|+.++..++|+||+++++++.+ ...+|+
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD--ENNLYL 78 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec--CCEEEE
Confidence 479999999999999999999999999999999875322 23344567889999999999999999999987 567999
Q ss_pred EEeeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 197 VFKYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 197 v~e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
||||+.++.+..+. .....+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++.........
T Consensus 79 v~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~ 158 (332)
T cd05623 79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 158 (332)
T ss_pred EEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcc
Confidence 99999876554444 43567999999999999999999999999999999999999999999999999998765433322
Q ss_pred CCccccccCCCCCcccccC----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 276 PMTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~----~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
.....+||+.|+|||++.+ ...++.++|||||||++|||++|++||.+.+..+.+.++........
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~---------- 228 (332)
T cd05623 159 QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---------- 228 (332)
T ss_pred eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcccc----------
Confidence 2334579999999999862 34588999999999999999999999999888777777653211100
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCC--ccCHHHHHhCCCCCCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAE--RQTATAALRSEFFTTKPY 409 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~--R~ta~elL~hp~f~~~~~ 409 (495)
+......+++++.+||.+||..++.+ |+++.++++||||....|
T Consensus 229 --------------~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~ 274 (332)
T cd05623 229 --------------FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGIDW 274 (332)
T ss_pred --------------CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCCH
Confidence 11122457888999999999776555 689999999999997655
No 108
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1e-45 Score=364.79 Aligned_cols=256 Identities=26% Similarity=0.374 Sum_probs=206.6
Q ss_pred ecccCceEEEEEEECCCCeEEEeEEEecCCCC-hHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCC
Q 011041 126 IGQGTYSNVYKARDTLTGQIVALKKVRFDNLE-PESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHD 204 (495)
Q Consensus 126 LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~ 204 (495)
||+|+||+||+|.+..+|+.||+|++...... ......+..|+.+|+.++|+||+++++++.. ...+|+||||+.++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~g 78 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT--KTDLCLVMTIMNGG 78 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC--CCeEEEEEeCCCCC
Confidence 79999999999999999999999999765432 2334567789999999999999999998877 46799999999987
Q ss_pred hhhhhh----CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccc
Q 011041 205 LAGLAA----SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSR 280 (495)
Q Consensus 205 l~~~~~----~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~ 280 (495)
.+.... .....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+..... .....
T Consensus 79 ~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~ 157 (280)
T cd05608 79 DLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKGY 157 (280)
T ss_pred CHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-ccccc
Confidence 655433 2345699999999999999999999999999999999999999999999999999976643322 23345
Q ss_pred cccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCc
Q 011041 281 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQ 360 (495)
Q Consensus 281 ~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 360 (495)
.||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...........+........
T Consensus 158 ~g~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~------------------- 217 (280)
T cd05608 158 AGTPGFMAPELLQG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS------------------- 217 (280)
T ss_pred CCCcCccCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC-------------------
Confidence 78999999999876 5688999999999999999999999987544322222211110000
Q ss_pred ccccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCCC
Q 011041 361 SYKRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPYA 410 (495)
Q Consensus 361 ~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~~ 410 (495)
......+++.+.+||.+||+.||.+|+ |++++++||||+...|.
T Consensus 218 ------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~ 266 (280)
T cd05608 218 ------VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWR 266 (280)
T ss_pred ------CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHh
Confidence 011235778899999999999999999 89999999999986554
No 109
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.7e-45 Score=359.65 Aligned_cols=282 Identities=38% Similarity=0.704 Sum_probs=230.9
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|++++.||.|++|.||+|++..+|..||||++...... .....+.+|+.+++.++|+||+++++++.+ ....|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHT--ENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEee--CCcEEEEE
Confidence 589999999999999999999999999999999765432 233556789999999999999999999987 46789999
Q ss_pred eeccCChhhhhhCCC--CCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 199 KYMEHDLAGLAASPT--IKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 199 e~~~~~l~~~~~~~~--~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||+.+++...+.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++....... ..
T Consensus 78 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-~~ 156 (284)
T cd07836 78 EYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-NT 156 (284)
T ss_pred ecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc-cc
Confidence 999998777655433 468999999999999999999999999999999999999999999999999997654322 22
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
.....+++.|++||++.+...++.++|||||||++|+|++|++||.+.+..+.+.++......+....|...........
T Consensus 157 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07836 157 FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP 236 (284)
T ss_pred cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcc
Confidence 23456789999999987766678999999999999999999999999999999999999988888887765331111000
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
..............+.+++.+.++|.+||+.||.+|||+.++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 237 TFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred cccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 000000111222334568899999999999999999999999999998
No 110
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.4e-45 Score=364.66 Aligned_cols=262 Identities=24% Similarity=0.392 Sum_probs=214.2
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCC-hHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLE-PESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
.|++.+.||+|+||.||++.+..+++.||||++...... ......+.+|+.+++.++||||+++++++.. ...+|+|
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 78 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET--KDALCLV 78 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC--CCeEEEE
Confidence 488999999999999999999999999999999764432 2233556789999999999999999999877 4579999
Q ss_pred EeeccCChhhhhh-C-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 198 FKYMEHDLAGLAA-S-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 198 ~e~~~~~l~~~~~-~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
|||+.++.+.... . ....+++..+..++.||+.||.|||++||+||||||+|||+++++.++|+|||++...... .
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--~ 156 (285)
T cd05605 79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG--E 156 (285)
T ss_pred EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC--C
Confidence 9999876555433 2 2346999999999999999999999999999999999999999999999999999865432 2
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
.....+|++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.......+........
T Consensus 157 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-------------- 221 (285)
T cd05605 157 TIRGRVGTVGYMAPEVVKN-ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ-------------- 221 (285)
T ss_pred ccccccCCCCccCcHHhcC-CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc--------------
Confidence 2244578999999999876 5689999999999999999999999998766554444432211100
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPYA 410 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~~ 410 (495)
......+++.+.+||.+||..||.+|| ++.++++||||....|.
T Consensus 222 -----------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05605 222 -----------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFK 270 (285)
T ss_pred -----------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHH
Confidence 011234678889999999999999999 99999999999876553
No 111
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=8.9e-46 Score=371.87 Aligned_cols=253 Identities=24% Similarity=0.354 Sum_probs=208.3
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
+.||+|+||.||+|+++.+|..||+|++.+... .......+..|+.++..+ +||||+++++++.+ ...+|+||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~lv~E~~ 78 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT--KEHLFFVMEFL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe--CCEEEEEECCC
Confidence 469999999999999999999999999986432 123345566788888765 89999999999987 56899999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
.++.+.........+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... ......+
T Consensus 79 ~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (316)
T cd05620 79 NGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NRASTFC 157 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-CceeccC
Confidence 987666555555679999999999999999999999999999999999999999999999999987432221 2234567
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQS 361 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (495)
||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.... +
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~--~--------------------- 213 (316)
T cd05620 158 GTPDYIAPEILQG-LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDT--P--------------------- 213 (316)
T ss_pred CCcCccCHHHHcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--C---------------------
Confidence 9999999999876 568999999999999999999999999888777666553211 0
Q ss_pred cccccccccCCCCCCcHHHHHHhccCCCCCccCH-HHHHhCCCCCCCCC
Q 011041 362 YKRCIAETFKDFPPSSLPLIETLLAIDPAERQTA-TAALRSEFFTTKPY 409 (495)
Q Consensus 362 ~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta-~elL~hp~f~~~~~ 409 (495)
.....++.++.+||.+||..||.+|+++ +++++||||....|
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~ 256 (316)
T cd05620 214 ------HYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINW 256 (316)
T ss_pred ------CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCCH
Confidence 0112356788999999999999999997 58889999987543
No 112
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=5.7e-46 Score=374.32 Aligned_cols=253 Identities=24% Similarity=0.374 Sum_probs=209.1
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHH-HHHhCCCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREIL-ILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
+.||+|+||+||+|++..+|+.||||++.+... .......+..|.. +++.++||||+++++++.. ...+|+||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~--~~~~~lv~e~~ 78 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--ADKLYFVLDYV 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe--CCEEEEEEcCC
Confidence 369999999999999999999999999976432 2223334445544 5678999999999999877 56899999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
.++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++...... .......+
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~ 157 (323)
T cd05575 79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKTTSTFC 157 (323)
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCcccccc
Confidence 98777666666668999999999999999999999999999999999999999999999999998753222 12234557
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQS 361 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (495)
||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+....
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------------------------ 212 (323)
T cd05575 158 GTPEYLAPEVLRK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP------------------------ 212 (323)
T ss_pred CChhhcChhhhcC-CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC------------------------
Confidence 9999999999876 568999999999999999999999999988777776664321
Q ss_pred cccccccccCCCCCCcHHHHHHhccCCCCCccCH----HHHHhCCCCCCCCC
Q 011041 362 YKRCIAETFKDFPPSSLPLIETLLAIDPAERQTA----TAALRSEFFTTKPY 409 (495)
Q Consensus 362 ~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta----~elL~hp~f~~~~~ 409 (495)
......+++.+.+||.+||+.||.+|+++ .+++.||||....|
T Consensus 213 -----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~ 259 (323)
T cd05575 213 -----LRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINW 259 (323)
T ss_pred -----CCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence 01123467889999999999999999997 69999999987554
No 113
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=5.6e-45 Score=363.45 Aligned_cols=288 Identities=47% Similarity=0.746 Sum_probs=228.9
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC------
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM------ 190 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------ 190 (495)
.++|++.+.||+|+||.||+|++..+++.||||.+............+.+|+.+++.++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 57899999999999999999999999999999998765433333345668999999999999999999876532
Q ss_pred CceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccC
Q 011041 191 SCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFD 270 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~ 270 (495)
....|+||||+.+++...+......+++.+++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++..+.
T Consensus 91 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 170 (310)
T cd07865 91 KGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFS 170 (310)
T ss_pred CceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence 24579999999998887776666679999999999999999999999999999999999999999999999999998664
Q ss_pred CCCC---CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhh
Q 011041 271 PNHK---QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKK 347 (495)
Q Consensus 271 ~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 347 (495)
.... .......++..|+|||++.+...++.++|||||||++|+|++|.+||.+.+.......+...++..+.+.|+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
T cd07865 171 LSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPG 250 (310)
T ss_pred CCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 3322 1223456788999999887755678999999999999999999999999998888888888888887776654
Q ss_pred CCCCC-CccCCCCccccccccccc--CCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 348 SKLPH-ATIFKPQQSYKRCIAETF--KDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 348 ~~~~~-~~~~~~~~~~~~~~~~~~--~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
..... .............+.... ...++.+.+||.+||..||.+|||++++|+||||
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 251 VDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred ccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 31110 000000011111111111 1135678899999999999999999999999998
No 114
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.1e-45 Score=373.26 Aligned_cols=253 Identities=21% Similarity=0.370 Sum_probs=205.7
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
+.||+|+||.||+|++..+++.||||++.+... .......+.+|+.++..+ +||||+++++++.+ ...+|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~--~~~~~lv~e~~ 78 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT--ESRLFFVIEFV 78 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc--CCEEEEEEeCC
Confidence 369999999999999999999999999986543 334456788999999998 79999999999987 56899999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
.++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++...... .......+
T Consensus 79 ~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~ 157 (329)
T cd05588 79 SGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDTTSTFC 157 (329)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccC-CCcccccc
Confidence 98766655555568999999999999999999999999999999999999999999999999998743221 12234568
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--------HHH-HHHHHHhcCCCChhhhhhCCCCC
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTE--------VEQ-LHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~--------~~~-~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... .+. ...+...
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~---------------- 220 (329)
T cd05588 158 GTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK---------------- 220 (329)
T ss_pred CCccccCHHHHcC-CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC----------------
Confidence 9999999999876 5689999999999999999999999963211 111 1111110
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC------HHHHHhCCCCCCCCC
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT------ATAALRSEFFTTKPY 409 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t------a~elL~hp~f~~~~~ 409 (495)
.......++.++.+||.+||+.||.+|+| +.++++||||....|
T Consensus 221 -------------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~ 270 (329)
T cd05588 221 -------------QIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDW 270 (329)
T ss_pred -------------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence 00112346778899999999999999987 799999999987554
No 115
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5.1e-45 Score=371.87 Aligned_cols=285 Identities=29% Similarity=0.521 Sum_probs=228.7
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC----Cc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM----SC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~ 192 (495)
.++|++++.||+|+||.||+|++..+|+.||||++.+..........+.+|+.+++.++|+||+++++++.... ..
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 47899999999999999999999999999999998765444455566778999999999999999999886432 23
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
..|+||||+.+++...+.. .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 95 ~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 171 (353)
T cd07850 95 DVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 171 (353)
T ss_pred cEEEEEeccCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC
Confidence 5799999999877766543 2899999999999999999999999999999999999999999999999999876433
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
. ......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+.++...++.+..+++.......
T Consensus 172 ~--~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (353)
T cd07850 172 F--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTV 248 (353)
T ss_pred C--CCCCCcccccccCHHHHhC-CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhh
Confidence 2 2344568999999999876 568999999999999999999999999999999999999999998876654321110
Q ss_pred CccCCCC-----cccccc---------cccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 353 ATIFKPQ-----QSYKRC---------IAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 353 ~~~~~~~-----~~~~~~---------~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
....... ..+... ........++.+.+||.+||+.||.+|||+.|+|.||||...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~ 317 (353)
T cd07850 249 RNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVW 317 (353)
T ss_pred hHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhc
Confidence 0000000 000000 001112345678999999999999999999999999999753
No 116
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=9.9e-46 Score=373.92 Aligned_cols=267 Identities=22% Similarity=0.306 Sum_probs=217.5
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++++.||+|+||.||++++..+++.||+|++.+... .......+.+|+.++..++|+||+++++++.+ ...+|+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~--~~~~~l 78 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD--ENYLYL 78 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc--CCEEEE
Confidence 579999999999999999999999999999999975322 33345567889999999999999999999987 568999
Q ss_pred EEeeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 197 VFKYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 197 v~e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
||||+.++.+..+. .....+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++..+......
T Consensus 79 v~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 158 (331)
T cd05624 79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV 158 (331)
T ss_pred EEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCce
Confidence 99999876555444 33567999999999999999999999999999999999999999999999999999776543322
Q ss_pred CCccccccCCCCCcccccCC----CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 276 PMTSRVVTLWYRPPELLLGA----TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~----~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
.....+||+.|+|||++.+. ..++.++|||||||+||+|++|+.||.+.+..+.+.++......+.
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~---------- 228 (331)
T cd05624 159 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---------- 228 (331)
T ss_pred eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCccc----------
Confidence 22345799999999988642 3578899999999999999999999998887777776653211110
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCC--ccCHHHHHhCCCCCCCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAE--RQTATAALRSEFFTTKPYA 410 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~--R~ta~elL~hp~f~~~~~~ 410 (495)
+.....+++.++.+||.+||..++.+ |++++++++|+||....|.
T Consensus 229 --------------~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~~ 275 (331)
T cd05624 229 --------------FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGIDWE 275 (331)
T ss_pred --------------CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCCHH
Confidence 11122457888999999999976655 5799999999999875553
No 117
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=7.3e-45 Score=360.66 Aligned_cols=286 Identities=42% Similarity=0.762 Sum_probs=232.3
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|++.+.||+|++|.||+|.++.+|+.||+|.+............+.+|+.+++.++|+||+++++++.+ ....|+|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS--EKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec--CCeEEEE
Confidence 67999999999999999999999999999999987654433444667889999999999999999999987 5689999
Q ss_pred EeeccCChhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC-CCcEEEeecccccccCCCCCC
Q 011041 198 FKYMEHDLAGLAASP-TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN-EGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~-~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~-~~~vkL~DFG~a~~~~~~~~~ 275 (495)
|||+++++....... ...+++..++.++.||+.||.|||++||+|+||||+||+++. ++.+||+|||++....... .
T Consensus 80 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-~ 158 (294)
T PLN00009 80 FEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-R 158 (294)
T ss_pred EecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc-c
Confidence 999998877665443 334688999999999999999999999999999999999985 5679999999997654321 2
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC-CCCCc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK-LPHAT 354 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~-~~~~~ 354 (495)
......+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+.+++...+.+....|.... ++...
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (294)
T PLN00009 159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYK 238 (294)
T ss_pred ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhh
Confidence 23445678999999998765568899999999999999999999999999889999999988988888876421 11111
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
...+.. .........+.+++++.++|.+||..||.+||++.++|+||||...
T Consensus 239 ~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 239 SAFPKW-PPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred hhcccC-CCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence 111100 0011222345678899999999999999999999999999999863
No 118
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-45 Score=370.01 Aligned_cols=253 Identities=29% Similarity=0.403 Sum_probs=212.7
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeE-EEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQI-VALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~-vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
.++..+.+.||.|+||+||++.++ |.. ||+|++............|.+|+.+|.+|+|||||+++|++.+.. ..+.
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~-~~~~ 116 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP-GSLC 116 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-CceE
Confidence 345566677999999999999766 555 999999877665555789999999999999999999999998742 2689
Q ss_pred EEEeeccCChhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHhhhCC-ceeccCCCCCeeeCCCC-cEEEeecccccccCC
Q 011041 196 LVFKYMEHDLAGLAASP--TIKFTQAQVKCYMHQLLSGLEHCHNQH-VLHRDIKGSNLLIDNEG-ILTIADFGLASFFDP 271 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~--~~~l~e~~~~~i~~qil~~L~~LH~~g-ivHrDlKp~NILl~~~~-~vkL~DFG~a~~~~~ 271 (495)
|||||+.++.+..+... ...++...+..++.||+.||+|||+++ ||||||||+||||+.++ ++||+|||+++....
T Consensus 117 iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 117 IVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred EEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 99999998877776654 678999999999999999999999999 99999999999999998 999999999987653
Q ss_pred CCCCCCccccccCCCCCcccccC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 272 NHKQPMTSRVVTLWYRPPELLLG-ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 272 ~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
.. ...+...||+.|||||++.+ ...|+.++||||||++||||+||..||.+.........+......|.
T Consensus 197 ~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~--------- 266 (362)
T KOG0192|consen 197 SK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPP--------- 266 (362)
T ss_pred cc-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC---------
Confidence 32 33455789999999999985 36799999999999999999999999999888666665543222211
Q ss_pred CCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 351 PHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....++.+..||..|+..||.+||+..+++.
T Consensus 267 ------------------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 267 ------------------IPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred ------------------CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 12237788999999999999999999999875
No 119
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.4e-45 Score=370.80 Aligned_cols=253 Identities=23% Similarity=0.370 Sum_probs=212.3
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
+.||+|+||.||+|++..+++.||||++.+... .......+.+|+.++..+ +||||+++++++.. ...+|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~ 78 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT--KDRLFFVMEYV 78 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc--CCEEEEEEcCC
Confidence 369999999999999999999999999986532 234456677899999988 79999999999987 56799999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
.++.+.........+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......+
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (318)
T cd05570 79 NGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VTTSTFC 157 (318)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Cccccee
Confidence 987776666666689999999999999999999999999999999999999999999999999986532221 2233457
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQS 361 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (495)
||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.......+.....
T Consensus 158 g~~~y~aPE~~~~-~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~----------------------- 213 (318)
T cd05570 158 GTPDYIAPEILSY-QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV----------------------- 213 (318)
T ss_pred cCccccCHHHhcC-CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC-----------------------
Confidence 8999999999876 5689999999999999999999999998887776666543110
Q ss_pred cccccccccCCCCCCcHHHHHHhccCCCCCccCH-----HHHHhCCCCCCCCC
Q 011041 362 YKRCIAETFKDFPPSSLPLIETLLAIDPAERQTA-----TAALRSEFFTTKPY 409 (495)
Q Consensus 362 ~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta-----~elL~hp~f~~~~~ 409 (495)
.....+++++.+||.+||..||.+|||+ .++++||||....|
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~ 260 (318)
T cd05570 214 ------RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDW 260 (318)
T ss_pred ------CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 0113467788999999999999999999 99999999987654
No 120
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-44 Score=373.97 Aligned_cols=281 Identities=23% Similarity=0.305 Sum_probs=218.4
Q ss_pred CCCeeeeeeecccCceEEEEEEEC--CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDT--LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~--~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
..+|.+++.||+|+||.||+|... .++..||+|.+... ....+|+.+|+.|+|||||++++++.. ...+
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~ 161 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRW--KSTV 161 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEee--CCEE
Confidence 467999999999999999999754 45678999987643 234579999999999999999999876 5679
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
|+|||++.+++...+ .....+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++........
T Consensus 162 ~lv~e~~~~~l~~~l-~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 162 CMVMPKYKCDLFTYV-DRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred EEEehhcCCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 999999998887766 4455799999999999999999999999999999999999999999999999999976643322
Q ss_pred C-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 275 Q-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRT---EVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 275 ~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~---~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
. .....+||+.|+|||++.+ ..|+.++|||||||++|||++|..||.+.. ....+..+.+.++..+.++......
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 319 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLAL-DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGST 319 (392)
T ss_pred cccccccccccCccCHhHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccch
Confidence 1 2234579999999998876 568999999999999999999999998754 4566777777666544332211000
Q ss_pred C-------CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCCC
Q 011041 351 P-------HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPYA 410 (495)
Q Consensus 351 ~-------~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~~ 410 (495)
. ......+.......+. -..++.++.+||.+||+.||.+|||+.++|.||||...|+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~ 384 (392)
T PHA03207 320 NLCKHFKQYAIVLRPPYTIPPVIR--KYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPIN 384 (392)
T ss_pred hHHHHHHhhcccccCCccccchhh--ccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccchh
Confidence 0 0000000000000010 12456788999999999999999999999999999986653
No 121
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.1e-44 Score=357.58 Aligned_cols=285 Identities=34% Similarity=0.632 Sum_probs=233.9
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|++.+.||+|+||.||+|.+..+++.||+|++............+.+|+.+++.++|+||+++++++.. ....|++
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~iv 78 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR--KGRLYLV 78 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE--CCEEEEE
Confidence 46999999999999999999999999999999987654444555778899999999999999999999987 5679999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
|||++++++..+......+++..+..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++...........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL 158 (288)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence 99999988887766666799999999999999999999999999999999999999999999999999987765443344
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC--cc
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA--TI 355 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~--~~ 355 (495)
...+++.+|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+...++......+........ ..
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV 238 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence 5567899999999998754788999999999999999999999999888888888888777776654433211000 00
Q ss_pred CCCCccccccccccc-CCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 356 FKPQQSYKRCIAETF-KDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~-~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
..+.......+...+ ..++.++.+||.+||..||.+|||+.++++||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 000100011111122 2348899999999999999999999999999998
No 122
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4e-46 Score=374.49 Aligned_cols=253 Identities=27% Similarity=0.407 Sum_probs=212.1
Q ss_pred eeecccCceEEEEEEE---CCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEee
Q 011041 124 DKIGQGTYSNVYKARD---TLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKY 200 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~---~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~ 200 (495)
+.||+|+||.||++++ ..+|+.||+|++.+..........+.+|+.+|++++||||+++++++.+ ...+|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT--EGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc--CCEEEEEEcC
Confidence 5799999999999986 4678999999998654433444567789999999999999999999987 5689999999
Q ss_pred ccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccc
Q 011041 201 MEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSR 280 (495)
Q Consensus 201 ~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~ 280 (495)
+.++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~ 158 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-KKAYSF 158 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-Cceecc
Confidence 9876665555555679999999999999999999999999999999999999999999999999987654332 223456
Q ss_pred cccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCc
Q 011041 281 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQ 360 (495)
Q Consensus 281 ~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 360 (495)
.||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 159 ~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~---------------------- 215 (318)
T cd05582 159 CGTVEYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL---------------------- 215 (318)
T ss_pred cCChhhcCHHHHcC-CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC----------------------
Confidence 78999999998876 5678999999999999999999999999888777776643211
Q ss_pred ccccccccccCCCCCCcHHHHHHhccCCCCCccC-----HHHHHhCCCCCCCCC
Q 011041 361 SYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT-----ATAALRSEFFTTKPY 409 (495)
Q Consensus 361 ~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----a~elL~hp~f~~~~~ 409 (495)
.....+++++.+||.+||+.||.+||| +.+++.||||....|
T Consensus 216 -------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~ 262 (318)
T cd05582 216 -------GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDW 262 (318)
T ss_pred -------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCH
Confidence 111346778899999999999999999 788999999987554
No 123
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.3e-45 Score=368.89 Aligned_cols=258 Identities=25% Similarity=0.375 Sum_probs=215.2
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCCceeEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLD-HPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~~~l 196 (495)
+|++.+.||+|+||.||+|+++.+|+.||||++.+... .......+..|+.++..+. |++|+++++++.. ...+|+
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT--VDRLYF 78 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec--CCEEEE
Confidence 47889999999999999999999999999999986532 2334556778999998886 5778889988877 567999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+.++.+.........+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ..
T Consensus 79 v~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~-~~ 157 (323)
T cd05615 79 VMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG-VT 157 (323)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC-cc
Confidence 99999987666666556679999999999999999999999999999999999999999999999999987543222 12
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.......+.....
T Consensus 158 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~------------------ 218 (323)
T cd05615 158 TRTFCGTPDYIAPEIIAY-QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV------------------ 218 (323)
T ss_pred ccCccCCccccCHHHHcC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC------------------
Confidence 234578999999998876 5689999999999999999999999999888777777654211
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC-----HHHHHhCCCCCCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT-----ATAALRSEFFTTKPY 409 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----a~elL~hp~f~~~~~ 409 (495)
.....++.++.+||.+||..||.+|++ ..++++||||....|
T Consensus 219 -----------~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~ 265 (323)
T cd05615 219 -----------SYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDW 265 (323)
T ss_pred -----------CCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCH
Confidence 111346778899999999999999997 589999999997655
No 124
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.4e-45 Score=381.48 Aligned_cols=277 Identities=25% Similarity=0.311 Sum_probs=210.7
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
...|.+.+.||+|+||.||+|++..+++.||||.... ..+.+|+.+|++|+|+|||++++++.. ....|+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~--~~~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVV--GGLTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEE--CCEEEE
Confidence 4579999999999999999999999999999996432 234689999999999999999999876 567899
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC-
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ- 275 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~- 275 (495)
|||++.+++...+......+++..++.|+.||+.||.|||++|||||||||+||||+.++.+||+|||+++........
T Consensus 238 v~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 238 VLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred EEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence 9999998888777665567999999999999999999999999999999999999999999999999999866433221
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCC-CCCCC------hHHHHHHHHHhcCCCChhhhh--
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPI-MPGRT------EVEQLHKIFKLCGSPSEEYWK-- 346 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~p-f~~~~------~~~~~~~i~~~~g~~~~~~~~-- 346 (495)
.....+||+.|+|||++.+ ..++.++||||||||||||++|..+ |.... ...++.+++...+....++-.
T Consensus 318 ~~~~~~GT~~Y~APE~~~~-~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAG-DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred cccccCCCcCCcCHHHHcC-CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 1234579999999999876 5689999999999999999998754 43321 133444454443322111100
Q ss_pred ------hCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 347 ------KSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 347 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
...........+. ........+..++.++.+||.+||++||.+|||+.|+|+||||++
T Consensus 397 ~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 397 GSRLVSQYRHRAARNRRPA--YTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred chHHHHHHHhhhhcccCCc--cCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 0000000000000 000001112346778999999999999999999999999999975
No 125
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=8.5e-45 Score=360.02 Aligned_cols=286 Identities=42% Similarity=0.721 Sum_probs=228.7
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCC---ce
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLD-HPNVVKLEGLVTSRMS---CS 193 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~---~~ 193 (495)
++|++.+.||+|+||.||+|++..+|+.||||++............+.+|+.+++.+. |+||+++++++..... ..
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4699999999999999999999999999999998765433333456778999999995 6999999998865321 24
Q ss_pred eEEEEeeccCChhhhhhCC----CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC-CCcEEEeecccccc
Q 011041 194 LYLVFKYMEHDLAGLAASP----TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN-EGILTIADFGLASF 268 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~----~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~-~~~vkL~DFG~a~~ 268 (495)
.|+||||+++++...+... ...+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++..
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 8999999999877765432 345899999999999999999999999999999999999998 88999999999976
Q ss_pred cCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhC
Q 011041 269 FDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 269 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 348 (495)
+.... .......+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.++.+.+.+++...+.+....|...
T Consensus 161 ~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T cd07837 161 FSIPV-KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV 239 (295)
T ss_pred cCCCc-cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence 54322 22233467899999998876566889999999999999999999999999999999999888888877766532
Q ss_pred CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 349 KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
.........++. ....+....+.+++++.+||.+||..||.+|||+.++|.||||.
T Consensus 240 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 240 SKLRDWHEFPQW-KPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hhccchhhcCcc-cchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 111000000000 00112333456889999999999999999999999999999985
No 126
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.1e-44 Score=356.81 Aligned_cols=284 Identities=39% Similarity=0.645 Sum_probs=223.5
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|.+++.||+|+||.||+|.+..+|..||||++...... .....+.+|+.+++.++|+||+++++++.. ....|+
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~~l 80 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHT--KETLTF 80 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEec--CCeEEE
Confidence 46899999999999999999999999999999998755322 223356689999999999999999999887 567999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+.++++..+......+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++....... ..
T Consensus 81 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~ 159 (291)
T cd07870 81 VFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-QT 159 (291)
T ss_pred EEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC-CC
Confidence 99999988887766655578899999999999999999999999999999999999999999999999987543222 22
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCChhhhhhCC-CCCCc
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRT-EVEQLHKIFKLCGSPSEEYWKKSK-LPHAT 354 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~-~~~~~~~i~~~~g~~~~~~~~~~~-~~~~~ 354 (495)
.....+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+ ..+.+.++....+.|....|.... ++...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07870 160 YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYK 239 (291)
T ss_pred CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhccccc
Confidence 2344679999999998765567889999999999999999999998754 457777777777777766654321 11100
Q ss_pred cCCCCcccccccccccC--CCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 355 IFKPQQSYKRCIAETFK--DFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~--~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
...........+..... ..++++.+||.+||..||.+|||+.|+|.||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 240 PEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred chhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 00000000000111111 125688999999999999999999999999998
No 127
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=7.5e-45 Score=358.56 Aligned_cols=284 Identities=33% Similarity=0.609 Sum_probs=228.8
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|++++.||+|+||.||+|.+..+++.||+|++..........+.+.+|+.+++.++||||+++++++.. ....|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR--KKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc--CCeEEEE
Confidence 46999999999999999999999999999999987654433445667889999999999999999999976 5689999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
|||+.++++..+......+++..+..++.||+.||.|||+.||+|+||+|+||++++++.++|+|||++....... ...
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-~~~ 157 (286)
T cd07846 79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EVY 157 (286)
T ss_pred EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-ccc
Confidence 9999998887766555569999999999999999999999999999999999999999999999999998764433 233
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC--Ccc
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH--ATI 355 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~--~~~ 355 (495)
....++..|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+....+.............. ...
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07846 158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGM 237 (286)
T ss_pred CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcc
Confidence 455789999999998765667889999999999999999999999988888888887766665432211100000 000
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
..+............+.++..+.+||.+||..||.+|||+.++|+||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 238 RLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred ccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0001111111223345678899999999999999999999999999998
No 128
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2e-45 Score=371.39 Aligned_cols=253 Identities=23% Similarity=0.390 Sum_probs=205.5
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
+.||+|+||.||+|++..+++.||+|++.+... .......+.+|+.++..+ +||||+++++++.. ...+|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~--~~~~~lv~E~~ 78 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT--ESRLFFVIEYV 78 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe--CCEEEEEEeCC
Confidence 369999999999999999999999999986533 334556678899998877 89999999999987 56899999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
.++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~~~~~~ 157 (329)
T cd05618 79 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTTSTFC 157 (329)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-Ccccccc
Confidence 987766666556689999999999999999999999999999999999999999999999999987532221 2234567
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------hHH-HHHHHHHhcCCCChhhhhhCCCCC
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRT--------EVE-QLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~--------~~~-~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.... ..+ ....+...
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~---------------- 220 (329)
T cd05618 158 GTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK---------------- 220 (329)
T ss_pred CCccccCHHHHcC-CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC----------------
Confidence 9999999999876 568999999999999999999999995311 111 11111110
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC------HHHHHhCCCCCCCCC
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT------ATAALRSEFFTTKPY 409 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t------a~elL~hp~f~~~~~ 409 (495)
.......++..+.+||.+||+.||.+|+| ..++++||||....|
T Consensus 221 -------------~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~ 270 (329)
T cd05618 221 -------------QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW 270 (329)
T ss_pred -------------CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence 00112346777899999999999999998 589999999987655
No 129
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.2e-44 Score=356.86 Aligned_cols=281 Identities=43% Similarity=0.789 Sum_probs=229.1
Q ss_pred eeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEe
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFK 199 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e 199 (495)
|++.+.||.|++|.||+|+++.+|..||+|++............+.+|+.+++.++|+||+++++++.+ ....|++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~--~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS--ENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc--CCeEEEEEe
Confidence 678899999999999999999999999999998665444444567789999999999999999999877 578999999
Q ss_pred eccCChhhhhhCCC-CCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCc
Q 011041 200 YMEHDLAGLAASPT-IKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMT 278 (495)
Q Consensus 200 ~~~~~l~~~~~~~~-~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~ 278 (495)
|+++.+...+.... ..+++..+..++.||+.||.|||+++++||||+|+|||++.++.++|+|||++....... ....
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~ 157 (283)
T cd07835 79 FLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV-RTYT 157 (283)
T ss_pred ccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-cccC
Confidence 99877666554432 468999999999999999999999999999999999999999999999999997654322 2223
Q ss_pred cccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC-CCCccCC
Q 011041 279 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL-PHATIFK 357 (495)
Q Consensus 279 ~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~-~~~~~~~ 357 (495)
...+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+....+.++.+..+.+....|..... +......
T Consensus 158 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd07835 158 HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTF 237 (283)
T ss_pred ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhc
Confidence 346789999999887655678999999999999999999999999999888888988888888877754321 1110000
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
+.. ...........++.++.+||.+||+.||.+|||+.++++||||
T Consensus 238 ~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 238 PKW-ARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred ccc-cccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 000 0111223345678889999999999999999999999999998
No 130
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=6.5e-46 Score=374.91 Aligned_cols=253 Identities=26% Similarity=0.366 Sum_probs=207.8
Q ss_pred ecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhC---CCCCeeeeeceeeccCCceeEEEEeec
Q 011041 126 IGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRL---DHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 126 LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
||+|+||+||+|++..+|+.||||++.+... .......+..|..++..+ +||||+++++++.. ...+|+||||+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~--~~~~~lv~e~~ 78 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT--DSDLYLVTDYM 78 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec--CCeEEEEEcCC
Confidence 7999999999999999999999999975432 223334455677777765 79999999999987 56799999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
.++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~ 157 (330)
T cd05586 79 SGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTTNTFC 157 (330)
T ss_pred CCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCccCcc
Confidence 987666555566689999999999999999999999999999999999999999999999999987543222 2234567
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQS 361 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (495)
||+.|+|||++.+...++.++|||||||++|+|++|..||.+.+..+.+..+.......
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~--------------------- 216 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRF--------------------- 216 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCC---------------------
Confidence 99999999998765668999999999999999999999999988777666653211000
Q ss_pred cccccccccCCCCCCcHHHHHHhccCCCCCcc----CHHHHHhCCCCCCCCC
Q 011041 362 YKRCIAETFKDFPPSSLPLIETLLAIDPAERQ----TATAALRSEFFTTKPY 409 (495)
Q Consensus 362 ~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~----ta~elL~hp~f~~~~~ 409 (495)
....+++++.+||.+||..||.+|| ++.++++||||....|
T Consensus 217 -------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~ 261 (330)
T cd05586 217 -------PKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDW 261 (330)
T ss_pred -------CCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCH
Confidence 0123678889999999999999998 7999999999987543
No 131
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.9e-45 Score=370.79 Aligned_cols=253 Identities=24% Similarity=0.363 Sum_probs=208.3
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHH-HHHHhCCCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREI-LILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei-~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
+.||+|+||.||+|++..+++.||+|++.+... .......+..|. .+++.++|+||+++++++.. ...+|+||||+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~--~~~~~lv~e~~ 78 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT--ADKLYFVLDYI 78 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc--CCeEEEEEeCC
Confidence 369999999999999999999999999975432 112223333444 45788999999999999887 56799999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
.++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+
T Consensus 79 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~~~~~~ 157 (325)
T cd05602 79 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GTTSTFC 157 (325)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CCccccc
Confidence 987776666666679999999999999999999999999999999999999999999999999987543221 2234567
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQS 361 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (495)
||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+.....
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~----------------------- 213 (325)
T cd05602 158 GTPEYLAPEVLHK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL----------------------- 213 (325)
T ss_pred CCccccCHHHHcC-CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc-----------------------
Confidence 9999999999876 5689999999999999999999999999888877776654210
Q ss_pred cccccccccCCCCCCcHHHHHHhccCCCCCccCHH----HHHhCCCCCCCCC
Q 011041 362 YKRCIAETFKDFPPSSLPLIETLLAIDPAERQTAT----AALRSEFFTTKPY 409 (495)
Q Consensus 362 ~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~----elL~hp~f~~~~~ 409 (495)
.....+++.+.+||.+||+.||.+|+++. ++++|+||....|
T Consensus 214 ------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~ 259 (325)
T cd05602 214 ------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINW 259 (325)
T ss_pred ------CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCH
Confidence 11235778899999999999999999876 8999999986544
No 132
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.9e-45 Score=372.13 Aligned_cols=276 Identities=24% Similarity=0.330 Sum_probs=210.7
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
..|++++.||+|+||.||+|++..++..||+|+..... ...|+.+++.++|+||+++++++.. ....|+|
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~--------~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 135 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT--------TLIEAMLLQNVNHPSVIRMKDTLVS--GAITCMV 135 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc--------cHHHHHHHHhCCCCCCcChhheEEe--CCeeEEE
Confidence 57999999999999999999999999999999854322 2468999999999999999999987 5678999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
|||+.+++...+......+++..+..++.||+.||.|||++|||||||||+|||++.++.+||+|||++...... ...
T Consensus 136 ~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~~ 213 (357)
T PHA03209 136 LPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--PAF 213 (357)
T ss_pred EEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC--ccc
Confidence 999999888887776678999999999999999999999999999999999999999999999999999753321 222
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCh---------HHHHHHHHHhcCCCChhhhhh
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAE-KPIMPGRTE---------VEQLHKIFKLCGSPSEEYWKK 347 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG-~~pf~~~~~---------~~~~~~i~~~~g~~~~~~~~~ 347 (495)
....||+.|+|||++.+ ..|+.++|||||||++|||+++ .++|..... ...+..+....+..+..+...
T Consensus 214 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 292 (357)
T PHA03209 214 LGLAGTVETNAPEVLAR-DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRD 292 (357)
T ss_pred ccccccccccCCeecCC-CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCC
Confidence 44578999999999876 5689999999999999999985 555554221 233444444444433322100
Q ss_pred CCCCCCccC-----CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 348 SKLPHATIF-----KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 348 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
........+ ....++..........++.++.+||.+||+.||.+|||+.|+|+||||++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 293 PGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred CccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 000000000 00000000001112356788999999999999999999999999999985
No 133
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.7e-45 Score=367.43 Aligned_cols=253 Identities=25% Similarity=0.386 Sum_probs=208.0
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
+.||+|+||.||+|++..+++.||||++..... ..........|+.++..+ +||||+++++++.+ ...+|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~--~~~~~lv~ey~ 78 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT--KENLFFVMEYL 78 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe--CCEEEEEEeCC
Confidence 369999999999999999999999999986432 123344566788888764 99999999999987 56799999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
.++.+.........+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......+
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (316)
T cd05619 79 NGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AKTCTFC 157 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-Cceeeec
Confidence 887666665555679999999999999999999999999999999999999999999999999987532221 2234557
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQS 361 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (495)
||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.... +.
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~--~~-------------------- 214 (316)
T cd05619 158 GTPDYIAPEILLG-QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN--PC-------------------- 214 (316)
T ss_pred CCccccCHHHHcC-CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CC--------------------
Confidence 8999999999876 568999999999999999999999999888777666653210 00
Q ss_pred cccccccccCCCCCCcHHHHHHhccCCCCCccCHH-HHHhCCCCCCCCC
Q 011041 362 YKRCIAETFKDFPPSSLPLIETLLAIDPAERQTAT-AALRSEFFTTKPY 409 (495)
Q Consensus 362 ~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~-elL~hp~f~~~~~ 409 (495)
....++.++.+||.+||+.||.+|+++. ++++||||....|
T Consensus 215 -------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~ 256 (316)
T cd05619 215 -------YPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDW 256 (316)
T ss_pred -------CCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCH
Confidence 0123567789999999999999999996 8999999988655
No 134
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.6e-45 Score=371.41 Aligned_cols=253 Identities=23% Similarity=0.352 Sum_probs=207.9
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHH-HHHhCCCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREIL-ILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~-il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
+.||+|+||+||+|++..+|+.||+|++.+... .......+..|.. +++.++||||+++++++.. ...+|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~--~~~~~lv~e~~ 78 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--TEKLYFVLDFV 78 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec--CCEEEEEEcCC
Confidence 369999999999999999999999999976432 2233344455554 5677999999999999887 56899999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
.++.+.........+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~~~ 157 (325)
T cd05604 79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-DTTTTFC 157 (325)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-CCccccc
Confidence 987776666666689999999999999999999999999999999999999999999999999987532221 2234567
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQS 361 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (495)
||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+....
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~------------------------ 212 (325)
T cd05604 158 GTPEYLAPEVIRK-QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP------------------------ 212 (325)
T ss_pred CChhhCCHHHHcC-CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC------------------------
Confidence 9999999999876 568899999999999999999999999988777766664311
Q ss_pred cccccccccCCCCCCcHHHHHHhccCCCCCccCH----HHHHhCCCCCCCCC
Q 011041 362 YKRCIAETFKDFPPSSLPLIETLLAIDPAERQTA----TAALRSEFFTTKPY 409 (495)
Q Consensus 362 ~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta----~elL~hp~f~~~~~ 409 (495)
......++..+.+||.+||..||.+||++ .+++.||||....|
T Consensus 213 -----~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~ 259 (325)
T cd05604 213 -----LVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSW 259 (325)
T ss_pred -----ccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCH
Confidence 00112466778899999999999999976 59999999987554
No 135
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.1e-44 Score=364.47 Aligned_cols=296 Identities=41% Similarity=0.751 Sum_probs=237.9
Q ss_pred CCCeee-eeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHH------------HHHHHHHHHHHHhCCCCCeeeee
Q 011041 117 ADTFEK-LDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPES------------VRFMAREILILRRLDHPNVVKLE 183 (495)
Q Consensus 117 ~~~y~~-~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~------------~~~~~~Ei~il~~l~HpnIv~l~ 183 (495)
.++|.. .+.||.|+||+||+|++..+++.||||++......... ...+.+|+.+++.++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 356765 46799999999999999999999999998754332100 12467899999999999999999
Q ss_pred ceeeccCCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeec
Q 011041 184 GLVTSRMSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADF 263 (495)
Q Consensus 184 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DF 263 (495)
+++.. ....|+||||+.+++...+. ....+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+||
T Consensus 87 ~~~~~--~~~~~lv~e~~~~~l~~~l~-~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 87 DVYVE--GDFINLVMDIMASDLKKVVD-RKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred EEEec--CCcEEEEEeccccCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCc
Confidence 99887 56899999999987766654 3456999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCC-------------CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 011041 264 GLASFFDPN-------------HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQL 330 (495)
Q Consensus 264 G~a~~~~~~-------------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~ 330 (495)
|++...... .........+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.++.+.+
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 243 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL 243 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999765411 1112233457889999999877666799999999999999999999999999999999
Q ss_pred HHHHHhcCCCChhhhhhCC-CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCC
Q 011041 331 HKIFKLCGSPSEEYWKKSK-LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPY 409 (495)
Q Consensus 331 ~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~ 409 (495)
..++..++.+....|+... .+....+... ............+.++.+||.+||..||.+|||++++|.||||+..+.
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~ 321 (335)
T PTZ00024 244 GRIFELLGTPNEDNWPQAKKLPLYTEFTPR--KPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPL 321 (335)
T ss_pred HHHHHHhCCCchhhCcchhhcccccccCcC--CcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCC
Confidence 9999999988887776432 1111111110 111223344567888999999999999999999999999999999888
Q ss_pred CCCCCCCC
Q 011041 410 ACDPSSLP 417 (495)
Q Consensus 410 ~~~~~~~p 417 (495)
.+.+..+|
T Consensus 322 ~~~~~~~~ 329 (335)
T PTZ00024 322 PCDPSQLP 329 (335)
T ss_pred CCCcccCC
Confidence 77766554
No 136
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.4e-44 Score=364.58 Aligned_cols=291 Identities=35% Similarity=0.587 Sum_probs=232.7
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC---Cce
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM---SCS 193 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~---~~~ 193 (495)
.++|.+++.||+|+||+||+|++..+|..||||.+............+.+|+.+++.++|+||+++++++.... ...
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 35799999999999999999999999999999998764333344456778999999999999999999886532 145
Q ss_pred eEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 011041 194 LYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH 273 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~ 273 (495)
+|+||||+.+++...+.. ...+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~lv~e~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 162 (337)
T cd07858 84 VYIVYELMDTDLHQIIRS-SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG 162 (337)
T ss_pred EEEEEeCCCCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc
Confidence 899999999877665544 4579999999999999999999999999999999999999999999999999998664322
Q ss_pred CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
.......++..|+|||++.+...++.++|||||||++|+|++|++||.+.+.......+....+.+..+.|........
T Consensus 163 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 163 -DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred -ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 2234457899999999887545688999999999999999999999999988888888888888877665532111110
Q ss_pred ccC---CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCCC
Q 011041 354 TIF---KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPYA 410 (495)
Q Consensus 354 ~~~---~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~~ 410 (495)
..+ .+... ........+++++++.+||.+||+.||.+|||+.++|+||||....-+
T Consensus 242 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 242 RRYIRSLPYTP-RQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP 300 (337)
T ss_pred hHHHHhcCccc-ccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence 000 00000 001122345688999999999999999999999999999999875433
No 137
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.2e-44 Score=362.63 Aligned_cols=288 Identities=33% Similarity=0.563 Sum_probs=229.8
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC---Cce
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM---SCS 193 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~---~~~ 193 (495)
.++|++.+.||+|+||.||+|++..+|+.||||++.... .......+.+|+.+++.++|+||+++++++.... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 478999999999999999999999999999999986432 2234456778999999999999999999875421 245
Q ss_pred eEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 011041 194 LYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH 273 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~ 273 (495)
+|+++||+.+++...+.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 83 ~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 83 VYIVQELMETDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred EEEEehhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 899999999877765543 469999999999999999999999999999999999999999999999999997654322
Q ss_pred C--CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 274 K--QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 274 ~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
. ......+||+.|+|||++.+...++.++|||||||++|+|++|++||.+.+....+..+....+.+..+.|......
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (336)
T cd07849 161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISL 240 (336)
T ss_pred cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhch
Confidence 1 11234578999999998766566899999999999999999999999999888888888888888776665432211
Q ss_pred CCccCC--CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 352 HATIFK--PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 352 ~~~~~~--~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
....+. ...............+++++.+||.+||+.||.+|||+.++|+||||...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~ 298 (336)
T cd07849 241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY 298 (336)
T ss_pred hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence 110000 00000111122334568899999999999999999999999999999864
No 138
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.4e-44 Score=383.91 Aligned_cols=261 Identities=22% Similarity=0.331 Sum_probs=218.7
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC-----
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS----- 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~----- 191 (495)
.++|.+.+.||+|+||+||+|++..+|+.||||++............+.+|+.+|..++|+||+++++.+.....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~ 110 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPEN 110 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCccc
Confidence 479999999999999999999999999999999998877666777788899999999999999999887753211
Q ss_pred -ceeEEEEeeccCChhhhhhC----CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccc
Q 011041 192 -CSLYLVFKYMEHDLAGLAAS----PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLA 266 (495)
Q Consensus 192 -~~~~lv~e~~~~~l~~~~~~----~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a 266 (495)
..+++||||+.++.+...+. ....+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++
T Consensus 111 ~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls 190 (496)
T PTZ00283 111 VLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFS 190 (496)
T ss_pred ceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccC
Confidence 24789999999765544332 2346999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCC-CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhh
Q 011041 267 SFFDPNH-KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYW 345 (495)
Q Consensus 267 ~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~ 345 (495)
..+.... .......+||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.+.+..+.+..+.....
T Consensus 191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~------- 262 (496)
T PTZ00283 191 KMYAATVSDDVGRTFCGTPYYVAPEIWRR-KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY------- 262 (496)
T ss_pred eeccccccccccccccCCcceeCHHHhCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC-------
Confidence 8664321 122345679999999999876 5689999999999999999999999999887777666543211
Q ss_pred hhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 346 KKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
......+++++.+||..||..||.+||++.++|+|||++.
T Consensus 263 ---------------------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 263 ---------------------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred ---------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 0112356788999999999999999999999999999874
No 139
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.3e-45 Score=368.37 Aligned_cols=253 Identities=23% Similarity=0.341 Sum_probs=205.8
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHH-HHHHhCCCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREI-LILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei-~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
+.||+|+||.||+|++..+|+.||+|++.+... .......+.+|+ .+++.++||||+++++++.+ ...+|+||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~--~~~~~lv~e~~ 78 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT--AEKLYFVLDYV 78 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc--CCEEEEEEcCC
Confidence 369999999999999999999999999976432 222233444554 46788999999999999877 56899999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
+++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.+|.+||+|||++....... ......+
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (321)
T cd05603 79 NGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ETTSTFC 157 (321)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Ccccccc
Confidence 987766666556679999999999999999999999999999999999999999999999999987532221 2234557
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQS 361 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (495)
||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.......+....
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~------------------------ 212 (321)
T cd05603 158 GTPEYLAPEVLRK-EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKP------------------------ 212 (321)
T ss_pred CCcccCCHHHhcC-CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCC------------------------
Confidence 8999999999876 568999999999999999999999999987766666554210
Q ss_pred cccccccccCCCCCCcHHHHHHhccCCCCCccCH----HHHHhCCCCCCCCC
Q 011041 362 YKRCIAETFKDFPPSSLPLIETLLAIDPAERQTA----TAALRSEFFTTKPY 409 (495)
Q Consensus 362 ~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta----~elL~hp~f~~~~~ 409 (495)
.......+.++.+||.+||+.||.+|+++ .++++|+||....|
T Consensus 213 -----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~ 259 (321)
T cd05603 213 -----LQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINW 259 (321)
T ss_pred -----CCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCH
Confidence 01112356678999999999999999875 59999999986443
No 140
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.5e-44 Score=365.74 Aligned_cols=282 Identities=24% Similarity=0.357 Sum_probs=213.5
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|++.++||+|+||.||++++..++..||+|++.... .......+.+|+++|+.++|+||+++++++.+ +..+|+
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~l 80 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--DGEISI 80 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEE--CCEEEE
Confidence 478999999999999999999999999999999987642 34455678899999999999999999999987 568999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhC-CceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQ-HVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~-givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
||||+.++.+..+......+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++..+...
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--- 157 (333)
T cd06650 81 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 157 (333)
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh---
Confidence 999998876666555556789999999999999999999975 7999999999999999999999999999765322
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh--cCCCChhhhhhCCCC--
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKL--CGSPSEEYWKKSKLP-- 351 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~--~g~~~~~~~~~~~~~-- 351 (495)
......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......+.. .++.. .+.+...........
T Consensus 158 ~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 235 (333)
T cd06650 158 MANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELE-LMFGCPVEGDPAESETSPRPRPPG 235 (333)
T ss_pred ccccCCCCccccCHHHhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHH-HHhcCcccCCccccccCcccCCcc
Confidence 1234578999999999876 56899999999999999999999999876553332 22211 111110000000000
Q ss_pred -----CCccCCCCccc----cccccccc-----CCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 352 -----HATIFKPQQSY----KRCIAETF-----KDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 352 -----~~~~~~~~~~~----~~~~~~~~-----~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
......+.... ...+.... ..++.++.+||.+||++||.+|||+.|+|.||||+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~ 304 (333)
T cd06650 236 RPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 304 (333)
T ss_pred chhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhc
Confidence 00000000000 00001111 124667899999999999999999999999999985
No 141
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.1e-45 Score=374.36 Aligned_cols=261 Identities=26% Similarity=0.443 Sum_probs=232.1
Q ss_pred CCCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 114 PRRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 114 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
......|.+.++||+|.|+.|.++++..+|..||||.|++..++......+.+|+++|..|+|||||+++.+++. ...
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t--~~~ 129 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIET--EAT 129 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeee--cce
Confidence 345688999999999999999999999999999999999998888887889999999999999999999999987 567
Q ss_pred eEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 011041 194 LYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH 273 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~ 273 (495)
+|+||||+.++.+..++...+++.+..++.+|.|++.+++|||+++|||||||++||||+.+.++||+|||++.+++..
T Consensus 130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~- 208 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG- 208 (596)
T ss_pred eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc-
Confidence 9999999999888888888888999999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
....+.+|++.|.|||++.|..+.++.+|+||||++||-|++|..||.|.+-.+.-.+.+...
T Consensus 209 -~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk---------------- 271 (596)
T KOG0586|consen 209 -LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGK---------------- 271 (596)
T ss_pred -ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeee----------------
Confidence 456788999999999999998888999999999999999999999999987555443332211
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
..+.--++.++.+||+++|.++|.+|++.++++.|.|....
T Consensus 272 -------------~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 272 -------------YRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred -------------ecccceeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 01112256789999999999999999999999999998753
No 142
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.1e-44 Score=366.45 Aligned_cols=290 Identities=34% Similarity=0.576 Sum_probs=234.0
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeecc--CCceeE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSR--MSCSLY 195 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~~~ 195 (495)
++|++.+.||+|+||.||+|++..+|..||+|++............+.+|+.+|+.++||||+++++++... ....+|
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 689999999999999999999999999999999976543344556777899999999999999999987542 245789
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC-
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK- 274 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~- 274 (495)
+||||+.+++...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 85 lv~e~~~~~l~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 163 (334)
T cd07855 85 VVMDLMESDLHHIIHS-DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE 163 (334)
T ss_pred EEEehhhhhHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC
Confidence 9999998876665543 45699999999999999999999999999999999999999999999999999976543221
Q ss_pred --CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 275 --QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 275 --~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
......+|+.+|+|||++.+...++.++|||||||++|+|++|++||.+.+...++..+....|.++...+....-..
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 243 (334)
T cd07855 164 HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDR 243 (334)
T ss_pred CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhh
Confidence 112345789999999998665568999999999999999999999999999999999999988988776554311000
Q ss_pred Cc----cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCCC
Q 011041 353 AT----IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPYA 410 (495)
Q Consensus 353 ~~----~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~~ 410 (495)
.. .+..... .........+++++.+||.+||+.||.+|||+.++|.||||...+.+
T Consensus 244 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~ 303 (334)
T cd07855 244 VRKYIQNLPRKQP--VPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDP 303 (334)
T ss_pred HHHHHhhcccCCC--CCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCC
Confidence 00 0000000 01223345678899999999999999999999999999999875443
No 143
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=5.7e-45 Score=353.64 Aligned_cols=260 Identities=30% Similarity=0.450 Sum_probs=211.9
Q ss_pred eeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEe
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFK 199 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e 199 (495)
|++++.||+|+||+||++++..+++.||+|++..............+|+.+++.++|+||+++++++.+ ....++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD--DNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE--SSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc--ccccccccc
Confidence 889999999999999999999999999999999776544444445669999999999999999999987 678999999
Q ss_pred eccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcc
Q 011041 200 YMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTS 279 (495)
Q Consensus 200 ~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~ 279 (495)
|+.++.+..+......+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.... ........
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~~~~~~ 157 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENNENFNP 157 (260)
T ss_dssp EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST-STTSEBSS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 99995444444345578999999999999999999999999999999999999999999999999997642 22233455
Q ss_pred ccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCC
Q 011041 280 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQ 359 (495)
Q Consensus 280 ~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 359 (495)
..+|..|+|||++.....++.++||||||+++|+|++|..||...+..+....+.+.........+..
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 225 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQ------------ 225 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTS------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccc------------
Confidence 67899999999987346789999999999999999999999998854444444443332211111100
Q ss_pred cccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 360 QSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 360 ~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
....+..+.+||..||+.||++|||+.++++||||
T Consensus 226 ----------~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 226 ----------SREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp ----------HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ----------cchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 01112678899999999999999999999999997
No 144
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-46 Score=376.60 Aligned_cols=259 Identities=25% Similarity=0.389 Sum_probs=222.0
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
+.|.|+..||.|+||.||+|.++.++-..|.|+|... ..+..+.+.-||.||..++||+||+|++.|.. .+.+||+
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk--seEELEDylVEIeILa~CdHP~ivkLl~ayy~--enkLwil 107 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK--SEEELEDYLVEIEILAECDHPVIVKLLSAYYF--ENKLWIL 107 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc--chhHHhhhhhhhhhhhcCCChHHHHHHHHHhc--cCceEEE
Confidence 6789999999999999999999999999999998643 46777888899999999999999999998876 5679999
Q ss_pred EeeccCChhhhh-hCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 198 FKYMEHDLAGLA-ASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 198 ~e~~~~~l~~~~-~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
.|||+||-.+.+ ..-+..|+|.++..+++|+|.||.|||+++|||||||..|||++.+|.|+|+|||.+.... .....
T Consensus 108 iEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~-~t~qk 186 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK-STRQK 186 (1187)
T ss_pred EeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccch-hHHhh
Confidence 999999865543 3446679999999999999999999999999999999999999999999999999886432 22345
Q ss_pred CccccccCCCCCcccccC----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 277 MTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~----~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
..+++|||+|||||+++. ..+|++++||||||++|.||..+.||-...++..++-+|.+. .|+ .
T Consensus 187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS--ePP-T--------- 254 (1187)
T KOG0579|consen 187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--EPP-T--------- 254 (1187)
T ss_pred hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc--CCC-c---------
Confidence 578899999999999843 467999999999999999999999999999988888887652 111 0
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
.-.....+..+.|||++||.+||..||++.++|+||||++.
T Consensus 255 --------------LlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 255 --------------LLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA 295 (1187)
T ss_pred --------------ccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence 01123456778899999999999999999999999999974
No 145
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.1e-44 Score=358.42 Aligned_cols=286 Identities=38% Similarity=0.649 Sum_probs=224.2
Q ss_pred CeeeeeeecccCceEEEEEEECC--CCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTL--TGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~--~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
+|++.+.||+|+||.||+|++.. ++..||||.+..... .......+.+|+.+++.++||||+++++++.+.....+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 48899999999999999999988 899999999986431 122235567899999999999999999999885457899
Q ss_pred EEEeeccCChhhhhhC----CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC----CCcEEEeeccccc
Q 011041 196 LVFKYMEHDLAGLAAS----PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN----EGILTIADFGLAS 267 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~----~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~----~~~vkL~DFG~a~ 267 (495)
+||||+++++...+.. ....+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.
T Consensus 81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~ 160 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR 160 (316)
T ss_pred EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence 9999999887765532 1236899999999999999999999999999999999999999 8999999999998
Q ss_pred ccCCCCC--CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---------HHHHHHHHh
Q 011041 268 FFDPNHK--QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEV---------EQLHKIFKL 336 (495)
Q Consensus 268 ~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~---------~~~~~i~~~ 336 (495)
....... .......+|+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+.. ..+..++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
T cd07842 161 LFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV 240 (316)
T ss_pred ccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHH
Confidence 7643322 12234567999999999877667899999999999999999999999876542 466777888
Q ss_pred cCCCChhhhhhCC-CCCCccC---CCCcccc----cccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 337 CGSPSEEYWKKSK-LPHATIF---KPQQSYK----RCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 337 ~g~~~~~~~~~~~-~~~~~~~---~~~~~~~----~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
++.+....|.... ++..... .....+. ....+.....+..+.+||.+||+.||.+|||+.|+++||||
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 241 LGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred hCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 8877776664321 1111110 0000000 00111113567889999999999999999999999999998
No 146
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.4e-44 Score=364.90 Aligned_cols=254 Identities=22% Similarity=0.373 Sum_probs=206.3
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
+.||+|+||.||+|++..+++.||+|++.+... .......+.+|+.++.++ +||||+.+++++.. ...+|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~ 78 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT--TSRLFLVIEYV 78 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe--CCEEEEEEeCC
Confidence 369999999999999999999999999986543 334566788999999988 69999999999987 56799999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
.++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 157 (327)
T cd05617 79 NGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-DTTSTFC 157 (327)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-Cceeccc
Confidence 987666655555679999999999999999999999999999999999999999999999999987532211 2234567
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRT------EVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~------~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
||+.|+|||++.+ ..++.++|||||||+||+|++|.+||.... ..+.+.++... .
T Consensus 158 gt~~y~aPE~~~~-~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~---------------- 218 (327)
T cd05617 158 GTPNYIAPEILRG-EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE--K---------------- 218 (327)
T ss_pred CCcccCCHHHHCC-CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh--C----------------
Confidence 9999999999876 568999999999999999999999996432 11222221110 0
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC------HHHHHhCCCCCCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT------ATAALRSEFFTTKPY 409 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t------a~elL~hp~f~~~~~ 409 (495)
.......++..+.+||.+||..||.+|++ ..+++.||||....|
T Consensus 219 ----------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~ 268 (327)
T cd05617 219 ----------PIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDW 268 (327)
T ss_pred ----------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCH
Confidence 00112346778899999999999999998 579999999998655
No 147
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=5.7e-44 Score=347.75 Aligned_cols=257 Identities=27% Similarity=0.447 Sum_probs=212.1
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCC---hHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLE---PESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
+.|++.+.||+|+||.||.|.+..+++.||+|.+...... ......+.+|+.++++++||||+++++++.. ...+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~ 79 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD--DETL 79 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc--CCeE
Confidence 4689999999999999999999999999999998765432 2234578899999999999999999999987 4589
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
|+||||+.++.+.........+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++........
T Consensus 80 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 80 SIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 99999998876655555555789999999999999999999999999999999999999999999999999976543221
Q ss_pred CCC--ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 275 QPM--TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 275 ~~~--~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
... ....++..|+|||++.+ ..++.++|||||||++|+|++|++||...+..+...++......
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~------------- 225 (263)
T cd06625 160 SGTGMKSVTGTPYWMSPEVISG-EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN------------- 225 (263)
T ss_pred ccccccCCCcCccccCcceecc-CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC-------------
Confidence 111 33467889999999876 45899999999999999999999999876655554443221100
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
......++..+.+||.+||..||.+|||+.++|+|+||
T Consensus 226 --------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 226 --------------PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred --------------CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 01123467788999999999999999999999999998
No 148
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-45 Score=361.24 Aligned_cols=267 Identities=27% Similarity=0.417 Sum_probs=224.1
Q ss_pred CCCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc
Q 011041 114 PRRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 114 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 192 (495)
+...+.|...+.||+|+||.||-|+.+.||+.||+|.+.+..+ .........+|-.||.+++.+.||.+-..|+. ..
T Consensus 181 pvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeT--kd 258 (591)
T KOG0986|consen 181 PVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFET--KD 258 (591)
T ss_pred hccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecC--CC
Confidence 4456889999999999999999999999999999999877654 22334456789999999999999999888877 45
Q ss_pred eeEEEEeeccCChhhhhhCCCC--CCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTI--KFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFD 270 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~--~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~ 270 (495)
.+++||..|+|+.+...+.+.+ .|+|..+..|+.+|+.||++||+.+||+|||||+|||+|+.|+|+|+|+|+|..+.
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 7999999999988877665544 79999999999999999999999999999999999999999999999999998875
Q ss_pred CCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 271 PNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 271 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
.+ .+....+||.+|||||++... .|+..+|+|||||+||||+.|+.||....+......+-+..-.-+.
T Consensus 339 ~g--~~~~~rvGT~GYMAPEvl~ne-~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~-------- 407 (591)
T KOG0986|consen 339 EG--KPIRGRVGTVGYMAPEVLQNE-VYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPE-------- 407 (591)
T ss_pred CC--CccccccCcccccCHHHHcCC-cccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchh--------
Confidence 44 556777999999999999874 5999999999999999999999999876544333333221111111
Q ss_pred CCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCCC
Q 011041 351 PHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPYA 410 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~~ 410 (495)
+....||+++++|.+.+|++||.+|+ .+.++.+||||++..|.
T Consensus 408 -----------------ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~ 455 (591)
T KOG0986|consen 408 -----------------EYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWR 455 (591)
T ss_pred -----------------hcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHh
Confidence 12246899999999999999999995 47899999999997774
No 149
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.9e-44 Score=355.40 Aligned_cols=261 Identities=25% Similarity=0.419 Sum_probs=209.4
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCC-hHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLE-PESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
+|++.+.||+|+||.||+|.+..+++.||+|.+...... ......+.+|+.+++.++|+||+.+++.+.+ ...+|+|
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv 78 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET--KDALCLV 78 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec--CCEEEEE
Confidence 478889999999999999999999999999998765432 2334556789999999999999999999877 4679999
Q ss_pred EeeccCChhhhhh--CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 198 FKYMEHDLAGLAA--SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 198 ~e~~~~~l~~~~~--~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
|||+.++.+.... .....+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 79 ~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 156 (285)
T cd05630 79 LTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 156 (285)
T ss_pred EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence 9999876554433 233468999999999999999999999999999999999999999999999999987654322
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
......||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+..................
T Consensus 157 ~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~-------------- 221 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ-------------- 221 (285)
T ss_pred cccCCCCCccccChHHHcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh--------------
Confidence 2234578999999999876 5689999999999999999999999987543221111111110000
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC-----HHHHHhCCCCCCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT-----ATAALRSEFFTTKPY 409 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----a~elL~hp~f~~~~~ 409 (495)
......+++++.+||..||+.||.+|+| +.|+++||||....+
T Consensus 222 -----------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~ 269 (285)
T cd05630 222 -----------EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINF 269 (285)
T ss_pred -----------hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCH
Confidence 0112346788999999999999999999 999999999986543
No 150
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.4e-44 Score=377.49 Aligned_cols=257 Identities=23% Similarity=0.336 Sum_probs=214.6
Q ss_pred CCCeeeeeeecccCceEEEEEEECCC-CeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLT-GQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~-g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
...|.+.+.||+|+||.||+|.+..+ +..||+|.+.... ......+.+|+.+|+.++|||||++++++.. ...+|
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~--~~~~~ 141 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND--ERQAAYARSELHCLAACDHFGIVKHFDDFKS--DDKLL 141 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE--CCEEE
Confidence 45699999999999999999998877 7889999875432 3445677889999999999999999999987 56899
Q ss_pred EEEeeccCChhhhhh----CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 196 LVFKYMEHDLAGLAA----SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 196 lv~e~~~~~l~~~~~----~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
|||||+.++.+...+ .....+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++..+..
T Consensus 142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence 999999876554322 2345689999999999999999999999999999999999999999999999999987643
Q ss_pred CCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 272 NHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 272 ~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
... ......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+......
T Consensus 222 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~----------- 289 (478)
T PTZ00267 222 SVSLDVASSFCGTPYYLAPELWER-KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD----------- 289 (478)
T ss_pred ccccccccccCCCccccCHhHhCC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-----------
Confidence 322 12345579999999998876 56899999999999999999999999988887777766532111
Q ss_pred CCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 351 PHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.....+++++.+||.+||..||.+||++.++|.|+|++.
T Consensus 290 -----------------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 290 -----------------PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred -----------------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 011246778999999999999999999999999999864
No 151
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=6.7e-44 Score=359.76 Aligned_cols=288 Identities=36% Similarity=0.598 Sum_probs=235.8
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC---CceeE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM---SCSLY 195 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~---~~~~~ 195 (495)
+|++.+.||.|+||.||+|++..+|+.||||++............+.+|+.+++.++|+||+++++++.... ...+|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 589999999999999999999999999999998765433455677889999999999999999999987632 23689
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC-
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK- 274 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~- 274 (495)
++|||+++++...+.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++........
T Consensus 81 lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~ 159 (330)
T cd07834 81 IVTELMETDLHKVIKS-PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE 159 (330)
T ss_pred EEecchhhhHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence 9999999876655544 34899999999999999999999999999999999999999999999999999987654321
Q ss_pred -CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 275 -QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 275 -~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
.......++++|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+....+.+..+.|........
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (330)
T cd07834 160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKA 239 (330)
T ss_pred cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccch
Confidence 2234557899999999988754789999999999999999999999999999999999999999888776653221111
Q ss_pred ccCCC--CcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 354 TIFKP--QQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 354 ~~~~~--~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
..+.. .......+......+++++.+||.+||++||.+|||+.++|+||||...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 295 (330)
T cd07834 240 RNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL 295 (330)
T ss_pred hhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence 11100 0001111233445578899999999999999999999999999999864
No 152
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.6e-44 Score=393.40 Aligned_cols=263 Identities=27% Similarity=0.421 Sum_probs=215.6
Q ss_pred CCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 115 RRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 115 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
...++|++++.||+|+||.||+|++..++..||+|++............+.+|+.+|+.|+|||||+++++|.+.....+
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 34689999999999999999999999999999999998776666667788899999999999999999999876556789
Q ss_pred EEEEeeccCChhhhhhC----CCCCCCHHHHHHHHHHHHHHHHHhhhC-------CceeccCCCCCeeeCC---------
Q 011041 195 YLVFKYMEHDLAGLAAS----PTIKFTQAQVKCYMHQLLSGLEHCHNQ-------HVLHRDIKGSNLLIDN--------- 254 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~----~~~~l~e~~~~~i~~qil~~L~~LH~~-------givHrDlKp~NILl~~--------- 254 (495)
||||||+.++.+..++. ....+++..++.|+.||+.||.|||+. +||||||||+||||+.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 99999999755544332 235799999999999999999999984 4999999999999964
Q ss_pred --------CCcEEEeecccccccCCCCCCCCccccccCCCCCcccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 011041 255 --------EGILTIADFGLASFFDPNHKQPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAEKPIMPGRT 325 (495)
Q Consensus 255 --------~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DvwSlGvil~elltG~~pf~~~~ 325 (495)
.+.+||+|||++..+.... .....+||+.|+|||++.+. ..++.++||||||||||+|++|.+||...+
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 2359999999998664322 22455799999999998643 457899999999999999999999998776
Q ss_pred hHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 326 EVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 326 ~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
....+..++... +. .....++.++.+||..||..||.+||++.|+|.|+||.
T Consensus 248 ~~~qli~~lk~~--p~--------------------------lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik 299 (1021)
T PTZ00266 248 NFSQLISELKRG--PD--------------------------LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIK 299 (1021)
T ss_pred cHHHHHHHHhcC--CC--------------------------CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHh
Confidence 655544433211 00 01123567899999999999999999999999999997
Q ss_pred CC
Q 011041 406 TK 407 (495)
Q Consensus 406 ~~ 407 (495)
..
T Consensus 300 ~i 301 (1021)
T PTZ00266 300 NV 301 (1021)
T ss_pred hc
Confidence 43
No 153
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-44 Score=360.02 Aligned_cols=259 Identities=28% Similarity=0.456 Sum_probs=211.9
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCcee
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~ 194 (495)
+...|+++++||.||.+.||++... ..+.||+|.+.....+...+.-+.+||..|.+| .|.+||+|++|-.. ++++
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~--d~~l 435 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT--DGYL 435 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc--CceE
Confidence 4578999999999999999999744 456788888877777788888999999999999 59999999999776 7899
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
||||||-+.||-..+.+....++.-.++.|..|||.++.++|++||||.||||.|+|+-. |.+||+|||+|..+.....
T Consensus 436 YmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 436 YMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred EEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-eeEEeeeechhcccCcccc
Confidence 999999999999888877766776799999999999999999999999999999999865 8999999999998765443
Q ss_pred C-CCccccccCCCCCcccccCCC----------CCCchhhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCCh
Q 011041 275 Q-PMTSRVVTLWYRPPELLLGAT----------DYGVGVDLWSAGCILAELLAEKPIMPGRT-EVEQLHKIFKLCGSPSE 342 (495)
Q Consensus 275 ~-~~~~~~gt~~y~aPE~l~~~~----------~~~~~~DvwSlGvil~elltG~~pf~~~~-~~~~~~~i~~~~g~~~~ 342 (495)
. ...+.+||+.||+||.+.... ..++++||||||||||+|+.|++||..-. ...-+..| ..|..
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI----~~P~~ 590 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAI----TDPNH 590 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhh----cCCCc
Confidence 2 334679999999999985421 25688999999999999999999996432 22222222 12211
Q ss_pred hhhhhCCCCCCccCCCCcccccccccccCCCCC--CcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 343 EYWKKSKLPHATIFKPQQSYKRCIAETFKDFPP--SSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.-.|+++|+ +++++++.||.+||.+|||..++|+|||++.
T Consensus 591 ------------------------~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 591 ------------------------EIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred ------------------------cccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 112333432 3899999999999999999999999999875
No 154
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.2e-44 Score=352.72 Aligned_cols=255 Identities=24% Similarity=0.363 Sum_probs=201.6
Q ss_pred ecccCceEEEEEEECCCCeEEEeEEEecCCCC-hHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCC
Q 011041 126 IGQGTYSNVYKARDTLTGQIVALKKVRFDNLE-PESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHD 204 (495)
Q Consensus 126 LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~ 204 (495)
||+|+||.||+++++.+|+.||+|.+...... ......+..|+.+++.++||||+++++++.. ...+|+||||+.++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~--~~~~~lv~e~~~g~ 78 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES--KTHLCLVMSLMNGG 78 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec--CCeEEEEEecCCCC
Confidence 79999999999999999999999999754332 2223445679999999999999999999887 56799999999876
Q ss_pred hhhhhh--CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccccc
Q 011041 205 LAGLAA--SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVV 282 (495)
Q Consensus 205 l~~~~~--~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g 282 (495)
.+.... .....+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++....... ......|
T Consensus 79 ~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~ 156 (277)
T cd05607 79 DLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQRAG 156 (277)
T ss_pred CHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeeccCC
Confidence 554333 233458999999999999999999999999999999999999999999999999998764322 2234578
Q ss_pred cCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCccc
Q 011041 283 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSY 362 (495)
Q Consensus 283 t~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 362 (495)
|+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.........+........
T Consensus 157 ~~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------- 214 (277)
T cd05607 157 TNGYMAPEILKE-EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDE--------------------- 214 (277)
T ss_pred CCCccCHHHHcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccc---------------------
Confidence 999999999876 4589999999999999999999999986543221111111100000
Q ss_pred ccccccccCCCCCCcHHHHHHhccCCCCCccCH----HHHHhCCCCCCCCC
Q 011041 363 KRCIAETFKDFPPSSLPLIETLLAIDPAERQTA----TAALRSEFFTTKPY 409 (495)
Q Consensus 363 ~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta----~elL~hp~f~~~~~ 409 (495)
+......+++++.+||.+||+.||.+||++ ++++.|+||....|
T Consensus 215 ---~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~ 262 (277)
T cd05607 215 ---VKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINF 262 (277)
T ss_pred ---cccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCH
Confidence 001123577889999999999999999999 77889999987554
No 155
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-45 Score=353.27 Aligned_cols=282 Identities=25% Similarity=0.420 Sum_probs=221.5
Q ss_pred CCCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCC--C----Ceeeeeceee
Q 011041 114 PRRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDH--P----NVVKLEGLVT 187 (495)
Q Consensus 114 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H--p----nIv~l~~~~~ 187 (495)
+....+|.++++||+|+||.|-+|.|..++..||||+|+.-. ...+...-|+.+|+++.+ | -+|.+.++|+
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~---kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd 161 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD---KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFD 161 (415)
T ss_pred cccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH---HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh
Confidence 334688999999999999999999999999999999987322 223344568999999932 1 3677888887
Q ss_pred ccCCceeEEEEeeccCChhhhhhC-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC------------
Q 011041 188 SRMSCSLYLVFKYMEHDLAGLAAS-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN------------ 254 (495)
Q Consensus 188 ~~~~~~~~lv~e~~~~~l~~~~~~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~------------ 254 (495)
. .++++||||.++-++.+.+.. ....|+..+++.+.+||+.++.|||+++++|-||||||||+..
T Consensus 162 y--rghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 162 Y--RGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred c--cCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCc
Confidence 7 578999999999777776655 4567999999999999999999999999999999999999932
Q ss_pred --------CCcEEEeecccccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Q 011041 255 --------EGILTIADFGLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTE 326 (495)
Q Consensus 255 --------~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~ 326 (495)
+..|+|+|||.|++.... -+..+.|..|+|||+++| -+++.++||||+||||+||.+|..+|++.++
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~e~----hs~iVsTRHYRAPEViLg-LGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDHEH----HSTIVSTRHYRAPEVILG-LGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred cceeccCCCcceEEEecCCcceeccC----cceeeeccccCCchheec-cCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 234899999999875433 267788999999999998 5689999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCChhhhhh---------CCCCCCccCC---------CCcccccccccccCCCCCCcHHHHHHhccCC
Q 011041 327 VEQLHKIFKLCGSPSEEYWKK---------SKLPHATIFK---------PQQSYKRCIAETFKDFPPSSLPLIETLLAID 388 (495)
Q Consensus 327 ~~~~~~i~~~~g~~~~~~~~~---------~~~~~~~~~~---------~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~d 388 (495)
.+.+.-+...+|.++.....+ .++....... +..+........ ..--.++.|||++||.+|
T Consensus 315 ~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~-d~e~~~LfDLl~~mL~fD 393 (415)
T KOG0671|consen 315 LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQD-DLEHVQLFDLLRRMLEFD 393 (415)
T ss_pred HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccC-cHHHhHHHHHHHHHHccC
Confidence 999999999999877554332 2222211111 111111111000 001134789999999999
Q ss_pred CCCccCHHHHHhCCCCCC
Q 011041 389 PAERQTATAALRSEFFTT 406 (495)
Q Consensus 389 P~~R~ta~elL~hp~f~~ 406 (495)
|.+|+|+.|+|.||||+.
T Consensus 394 P~~RiTl~EAL~HpFF~~ 411 (415)
T KOG0671|consen 394 PARRITLREALSHPFFAR 411 (415)
T ss_pred ccccccHHHHhcCHHhhc
Confidence 999999999999999986
No 156
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=6.6e-44 Score=352.78 Aligned_cols=261 Identities=25% Similarity=0.407 Sum_probs=214.0
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCC-hHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLE-PESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
.|+..+.||+|+||+||+|.+..+++.||+|.+...... ......+.+|+.+|+.++|+||+.+++++.. +..+|++
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv 78 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET--KDALCLV 78 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec--CCEEEEE
Confidence 378889999999999999999999999999999765432 2334567789999999999999999998877 5679999
Q ss_pred EeeccCChhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 198 FKYMEHDLAGLAAS--PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 198 ~e~~~~~l~~~~~~--~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
|||+.++.+..... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~--~ 156 (285)
T cd05632 79 LTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG--E 156 (285)
T ss_pred EEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC--C
Confidence 99999765544332 2346999999999999999999999999999999999999999999999999998765322 2
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
......|++.|+|||++.+ ..++.++|+|||||++|+|++|.+||.+..+......+.........
T Consensus 157 ~~~~~~g~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~------------- 222 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNN-QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE------------- 222 (285)
T ss_pred cccCCCCCcCccChHHhcC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc-------------
Confidence 2345578999999999876 56899999999999999999999999987765554444332211110
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC-----HHHHHhCCCCCCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT-----ATAALRSEFFTTKPY 409 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----a~elL~hp~f~~~~~ 409 (495)
.....+++++.+||..||..||.+||| +.+++.|+||....+
T Consensus 223 ------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~ 269 (285)
T cd05632 223 ------------VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNF 269 (285)
T ss_pred ------------ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCH
Confidence 112346778899999999999999999 899999999998654
No 157
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.3e-43 Score=358.41 Aligned_cols=285 Identities=34% Similarity=0.571 Sum_probs=228.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC----c
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS----C 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~----~ 192 (495)
.++|++++.||+|+||.||+|.+..+|..||||++............+.+|+.+|+.++|+||+++++++..... .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence 478999999999999999999999999999999986543334445567899999999999999999998865322 2
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.+|+||||+++++...... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 94 ~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 171 (343)
T cd07880 94 DFYLVMPFMGTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE 171 (343)
T ss_pred eEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC
Confidence 4699999997766554432 46899999999999999999999999999999999999999999999999999765432
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
.....+++.|+|||++.+...++.++|+|||||++|+|++|.+||.+.+....+.++++..+.++..++.......
T Consensus 172 ----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07880 172 ----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSED 247 (343)
T ss_pred ----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchh
Confidence 2344678999999998764568899999999999999999999999998888888888877777666554422111
Q ss_pred CccCCC--CcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 353 ATIFKP--QQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 353 ~~~~~~--~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
...+.. .......+......+++.+.+||.+||+.||.+|||+.+++.||||...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~ 304 (343)
T cd07880 248 AKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF 304 (343)
T ss_pred HHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence 100000 0000001222345678889999999999999999999999999999864
No 158
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2e-43 Score=342.76 Aligned_cols=255 Identities=24% Similarity=0.402 Sum_probs=212.2
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
.|++++.||.|++|.||++++..+++.||+|.+............+.+|+.++++++|+||+++++.+... +..+|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE-DGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC-CCEEEEEe
Confidence 48999999999999999999999999999999987655555667788999999999999999999887643 45789999
Q ss_pred eeccCChhhhhh-C-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 199 KYMEHDLAGLAA-S-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 199 e~~~~~l~~~~~-~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||+.++.+.... . ....+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||++....... ..
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~-~~ 158 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC-DM 158 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC-Cc
Confidence 999876554433 2 23468999999999999999999999999999999999999999999999999998764332 22
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
.....+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......+.....
T Consensus 159 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~------------------ 219 (257)
T cd08223 159 ASTLIGTPYYMSPELFSN-KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL------------------ 219 (257)
T ss_pred cccccCCcCccChhHhcC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC------------------
Confidence 344578999999998876 5678999999999999999999999988776555544432110
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
......+++.+.+||.+||..||.+|||+.++++||||
T Consensus 220 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 220 ----------PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred ----------CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 01113467789999999999999999999999999997
No 159
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=7.7e-44 Score=360.74 Aligned_cols=289 Identities=37% Similarity=0.616 Sum_probs=232.6
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~ 195 (495)
.++|++.+.||+|+||.||+|.+..+|..||+|++............+.+|+.+++.+ +|+||+++++++........|
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 5789999999999999999999999999999999865433344455677899999999 999999999998765456789
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC-
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK- 274 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~- 274 (495)
+||||+.+++...+... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 86 lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~ 163 (337)
T cd07852 86 LVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN 163 (337)
T ss_pred EEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccc
Confidence 99999998776555443 788999999999999999999999999999999999999999999999999986643322
Q ss_pred ---CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 275 ---QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 275 ---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
......+||+.|+|||++.+...++.++|||||||++|+|++|++||.+....+...++....+.+....|.....+
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (337)
T cd07852 164 PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSP 243 (337)
T ss_pred ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhh
Confidence 12334578999999998876667889999999999999999999999999988888888888887776554432111
Q ss_pred CCccCC--CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 352 HATIFK--PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 352 ~~~~~~--~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
....+. .............+.++.++.+||.+||+.||.+|||+.++|+||||+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 244 FAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred hHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence 000000 00001111233445578899999999999999999999999999999764
No 160
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.6e-43 Score=354.82 Aligned_cols=267 Identities=27% Similarity=0.342 Sum_probs=220.4
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCC-hHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLE-PESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++.+.||+|+||.||+|.+..+++.||||.+...... ......+.+|+.+++.++|+||+++++++.+ ....|+
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~l 78 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT--ETYLCL 78 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec--CCEEEE
Confidence 4799999999999999999999999999999999876543 2456678899999999999999999999877 568999
Q ss_pred EEeeccCChhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEHDLAGLAAS--PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~~l~~~~~~--~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
||||+.++.+..+.. ....+++..+..++.||+.||.|||+.||+|+||||+||||+.++.++|+|||++........
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 158 (316)
T cd05574 79 VMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPP 158 (316)
T ss_pred EEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccc
Confidence 999998765554443 235799999999999999999999999999999999999999999999999999875532211
Q ss_pred C----------------------------CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh
Q 011041 275 Q----------------------------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTE 326 (495)
Q Consensus 275 ~----------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~ 326 (495)
. .....+||..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG-DGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC-CCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 0 1123468899999999876 4678999999999999999999999998887
Q ss_pred HHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC----HHHHHhCC
Q 011041 327 VEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT----ATAALRSE 402 (495)
Q Consensus 327 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t----a~elL~hp 402 (495)
...+.++....... .....+++.+.+||.+||..||.+||| ++++|+||
T Consensus 238 ~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~ 290 (316)
T cd05574 238 DETFSNILKKEVTF---------------------------PGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHP 290 (316)
T ss_pred HHHHHHHhcCCccC---------------------------CCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCc
Confidence 77666654211000 001226788999999999999999999 99999999
Q ss_pred CCCCCCCCCCCC
Q 011041 403 FFTTKPYACDPS 414 (495)
Q Consensus 403 ~f~~~~~~~~~~ 414 (495)
||++..|+....
T Consensus 291 ~~~~~~~~~~~~ 302 (316)
T cd05574 291 FFRGVNWALIRH 302 (316)
T ss_pred hhhcCChhhccc
Confidence 999987765444
No 161
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.1e-43 Score=358.53 Aligned_cols=285 Identities=33% Similarity=0.568 Sum_probs=228.4
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC----Cc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM----SC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~ 192 (495)
.++|.+.+.||+|+||.||+|++..+|+.||||++.+..........+.+|+.+++.++|+||+++++++.... ..
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 36899999999999999999999999999999998765433334456778999999999999999999986532 13
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.+|+|+||+...+.... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 94 ~~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~- 169 (342)
T cd07879 94 DFYLVMPYMQTDLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA- 169 (342)
T ss_pred eEEEEecccccCHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC-
Confidence 56999999987655433 23689999999999999999999999999999999999999999999999999876432
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
......+++.|+|||++.+...++.++|||||||++|+|++|+.||.+.+....+..+....+.+....+.......
T Consensus 170 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T cd07879 170 ---EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKA 246 (342)
T ss_pred ---CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccc
Confidence 22345778999999998765568899999999999999999999999998888999999888877776655432111
Q ss_pred CccCCC--CcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCC
Q 011041 353 ATIFKP--QQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKP 408 (495)
Q Consensus 353 ~~~~~~--~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~ 408 (495)
...+.. .......+...++.+++.+.+||.+||+.||.+|||+.++|.||||....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 247 AKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred hHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 110000 00001112223345778899999999999999999999999999998754
No 162
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.1e-43 Score=349.01 Aligned_cols=282 Identities=42% Similarity=0.751 Sum_probs=233.6
Q ss_pred eeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEe
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFK 199 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e 199 (495)
|++.+.||+|.||.||+|++..+++.||+|++............+.+|+.+++.++|+||+++++++.+ ....|+|||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT--ERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc--CCceEEEec
Confidence 667889999999999999999999999999998654334445667789999999999999999999987 468999999
Q ss_pred eccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcc
Q 011041 200 YMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTS 279 (495)
Q Consensus 200 ~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~ 279 (495)
|+++++...+......+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++....... .....
T Consensus 79 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~-~~~~~ 157 (282)
T cd07829 79 YCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL-RTYTH 157 (282)
T ss_pred CcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc-cccCc
Confidence 99988776666554579999999999999999999999999999999999999999999999999998764332 22334
Q ss_pred ccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCC
Q 011041 280 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQ 359 (495)
Q Consensus 280 ~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 359 (495)
..++..|+|||.+.+...++.++|||||||++|+|++|.+||.+.+..+.+.++...++.+.+..|.....-........
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP 237 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence 45688899999987655789999999999999999999999999999999999999999999888865322111111111
Q ss_pred cccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 360 QSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 360 ~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
..........++.++..+.++|.+||..||.+||++.+++.||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 111112234455668889999999999999999999999999998
No 163
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-45 Score=367.78 Aligned_cols=255 Identities=29% Similarity=0.492 Sum_probs=221.1
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
..|.-++.||.|+||.||-|+|..+.+.||||++..... ..+...++..|+..|++|+|||++.+.|+|.. +...||
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr--e~TaWL 103 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR--EHTAWL 103 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec--cchHHH
Confidence 457788999999999999999999999999999988765 45567789999999999999999999999987 567899
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
|||||-|+-.+++.-..+.+-|.++..|+.+.+.||.|||+++.||||||..|||+++.|.|||+|||.|....+
T Consensus 104 VMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P----- 178 (948)
T KOG0577|consen 104 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP----- 178 (948)
T ss_pred HHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc-----
Confidence 999999977666666667899999999999999999999999999999999999999999999999999988754
Q ss_pred CccccccCCCCCccccc--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 277 MTSRVVTLWYRPPELLL--GATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~--~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
..+++|||+||||||++ ..+.|+-++||||||++..||.-.+||+..-+....+..|...- .|.
T Consensus 179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe-sPt------------- 244 (948)
T KOG0577|consen 179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-SPT------------- 244 (948)
T ss_pred hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC-CCC-------------
Confidence 46789999999999985 34679999999999999999999999988888777776664321 110
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
+. -.+.+..+.+||..||++-|.+|||.+++|+|+|+..
T Consensus 245 -----------Lq--s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 245 -----------LQ--SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred -----------CC--CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 00 1234567888999999999999999999999999874
No 164
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=9.9e-44 Score=349.57 Aligned_cols=281 Identities=44% Similarity=0.778 Sum_probs=233.0
Q ss_pred eeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEe
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFK 199 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e 199 (495)
|++.+.||+|++|.||+|.+..+|+.+++|.+............+.+|+.+|+.++|+||+++++++.+ ...+|+|||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH--KGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc--CCCEEEEEe
Confidence 667889999999999999999999999999987665554556778899999999999999999999887 467999999
Q ss_pred eccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcc
Q 011041 200 YMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTS 279 (495)
Q Consensus 200 ~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~ 279 (495)
|+++++...+......+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+....... .....
T Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~~~~ 157 (283)
T cd05118 79 FMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RPYTH 157 (283)
T ss_pred ccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-ccccC
Confidence 99998887776655689999999999999999999999999999999999999999999999999998775443 22344
Q ss_pred ccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC--CCCccCC
Q 011041 280 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL--PHATIFK 357 (495)
Q Consensus 280 ~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~--~~~~~~~ 357 (495)
..++..|+|||.+.+...++.++|||||||++|+|++|++||.+.+..+.+.++....+.+....|..... .......
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 56888999999987754789999999999999999999999999999999999988888887776655321 0000000
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
+. ............++.++.+||.+||..||.+||++.+++.||||
T Consensus 238 ~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 238 PK-KAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred cc-ccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 00 00000122334578889999999999999999999999999997
No 165
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=5.4e-45 Score=329.84 Aligned_cols=281 Identities=31% Similarity=0.590 Sum_probs=235.0
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCCcee
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLD-HPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~~ 194 (495)
..++|++.+++|+|-|+.||.|.+..+++.++||+++ +.....+.||++||+.|. ||||++|++++.+..+...
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLK-----PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktp 110 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILK-----PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTP 110 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeec-----hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCc
Confidence 3589999999999999999999999999999999976 345678999999999996 9999999999999888889
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC-CcEEEeecccccccCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE-GILTIADFGLASFFDPNH 273 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~-~~vkL~DFG~a~~~~~~~ 273 (495)
.++|||++......+.. .|+.-.++.++.||+.||.|||++||+|||+||.|++||.. -.++|+|+|+|-++.++
T Consensus 111 aLiFE~v~n~Dfk~ly~---tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~- 186 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQLYP---TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG- 186 (338)
T ss_pred hhHhhhhccccHHHHhh---hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCC-
Confidence 99999999755444332 57889999999999999999999999999999999999985 46999999999998765
Q ss_pred CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCChHHHHHHHHHhcCCCCh-hhhhhCCCC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEK-PIMPGRTEVEQLHKIFKLCGSPSE-EYWKKSKLP 351 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~-~pf~~~~~~~~~~~i~~~~g~~~~-~~~~~~~~~ 351 (495)
......+.+..|--||++..-..|+..-|+|||||+|..|+..+ |.|.|.++.+++-+|.+.+|+..- .+..+.++.
T Consensus 187 -~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~ 265 (338)
T KOG0668|consen 187 -KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQID 265 (338)
T ss_pred -ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccC
Confidence 34566788999999999988888999999999999999999876 556789999999999999998653 333443332
Q ss_pred CCccC------CCCcccccccccccCCC-CCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 352 HATIF------KPQQSYKRCIAETFKDF-PPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 352 ~~~~~------~~~~~~~~~~~~~~~~~-s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
-...+ .....+.+++...-..+ ++++.|||.++|.+|-.+|+||.|++.||||..
T Consensus 266 Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 266 LDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP 327 (338)
T ss_pred CChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence 22222 22334444454444443 699999999999999999999999999999974
No 166
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.6e-43 Score=375.01 Aligned_cols=284 Identities=24% Similarity=0.343 Sum_probs=207.5
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCC-eEEEeEEE--------------ecC-CCChHHHHHHHHHHHHHHhCCCCCee
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTG-QIVALKKV--------------RFD-NLEPESVRFMAREILILRRLDHPNVV 180 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g-~~vAiK~i--------------~~~-~~~~~~~~~~~~Ei~il~~l~HpnIv 180 (495)
.++|++++.||+|+||.||+|..+... ..+++|.+ .+. .........+.+|+.+|+.++|+|||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 578999999999999999999765332 22222211 111 11223455688999999999999999
Q ss_pred eeeceeeccCCceeEEEEeeccCChhhhhhCC----CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC
Q 011041 181 KLEGLVTSRMSCSLYLVFKYMEHDLAGLAASP----TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG 256 (495)
Q Consensus 181 ~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~----~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~ 256 (495)
++++++.+ ....|+|++++.++++..+... ........++.|+.||+.||.|||++|||||||||+||||+.++
T Consensus 227 ~l~~~~~~--~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~ 304 (501)
T PHA03210 227 KIEEILRS--EANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG 304 (501)
T ss_pred cEeEEEEE--CCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence 99999987 4678999999998887765432 22345677889999999999999999999999999999999999
Q ss_pred cEEEeecccccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC-C--CChHHHHHHH
Q 011041 257 ILTIADFGLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMP-G--RTEVEQLHKI 333 (495)
Q Consensus 257 ~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~-~--~~~~~~~~~i 333 (495)
.+||+|||++..+...........+||+.|+|||++.+ ..|+.++|||||||+||||++|..++. + .+...++.++
T Consensus 305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~ 383 (501)
T PHA03210 305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI 383 (501)
T ss_pred CEEEEeCCCceecCcccccccccccCCcCCCCchhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence 99999999998775443333345689999999999876 568999999999999999999875443 2 3445666666
Q ss_pred HHhcCCCChhh-------hhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 334 FKLCGSPSEEY-------WKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 334 ~~~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
...++....++ |..... .............+.. ..++.++.++|.+||++||.+|||+.|+|.||||..
T Consensus 384 ~~~~~~~~~~~p~~~~~~~~~i~~--~~~~~~~~~~~~~~~~--~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~ 459 (501)
T PHA03210 384 IDSLSVCDEEFPDPPCKLFDYIDS--AEIDHAGHSVPPLIRN--LGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSA 459 (501)
T ss_pred HHhcccChhhcCCcHHHHHHHhhh--hhcccCccchhhHHHh--cCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhc
Confidence 66555433221 111000 0000000111111111 235778899999999999999999999999999986
Q ss_pred C
Q 011041 407 K 407 (495)
Q Consensus 407 ~ 407 (495)
.
T Consensus 460 ~ 460 (501)
T PHA03210 460 E 460 (501)
T ss_pred C
Confidence 4
No 167
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.5e-43 Score=357.13 Aligned_cols=281 Identities=21% Similarity=0.304 Sum_probs=208.1
Q ss_pred eeeeeccc--CceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEe
Q 011041 122 KLDKIGQG--TYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFK 199 (495)
Q Consensus 122 ~~~~LG~G--~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e 199 (495)
++++||+| +|++||+++++.+|+.||+|++............+.+|+.+++.++||||+++++++.. +...|+|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~--~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA--DNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE--CCEEEEEEe
Confidence 56789999 78999999999999999999998765555666788899999999999999999999987 567999999
Q ss_pred eccCChhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC--
Q 011041 200 YMEHDLAGLAASP--TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ-- 275 (495)
Q Consensus 200 ~~~~~l~~~~~~~--~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~-- 275 (495)
|+.++.+..+... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++++|||...........
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 9998766554432 345899999999999999999999999999999999999999999999999875433211100
Q ss_pred ----CCccccccCCCCCcccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC---------
Q 011041 276 ----PMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPS--------- 341 (495)
Q Consensus 276 ----~~~~~~gt~~y~aPE~l~~~-~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~--------- 341 (495)
......++..|+|||++.+. ..|+.++|||||||++|+|++|++||.............. +..+
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 237 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN--GTVPCLLDTTTIP 237 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhc--CCccccccccchh
Confidence 01123567889999998753 3589999999999999999999999987655443333322 1111
Q ss_pred hhhhhh--C------CCCCCccC--CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 342 EEYWKK--S------KLPHATIF--KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 342 ~~~~~~--~------~~~~~~~~--~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.+.+.. . ........ ................+++.+.+||.+||++||.+|||+.++|+||||+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 000000 0 00000000 00000000111222345778999999999999999999999999999975
No 168
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.1e-43 Score=358.58 Aligned_cols=285 Identities=35% Similarity=0.596 Sum_probs=231.8
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC----c
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS----C 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~----~ 192 (495)
.++|++.+.||+|+||.||+|++..+++.||+|++............+.+|+.+++.++|+||+++++++..... .
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 578999999999999999999999999999999987654344455667789999999999999999988765321 3
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
..|+|+||+++++...+.. ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 94 ~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~ 171 (343)
T cd07851 94 DVYLVTHLMGADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE 171 (343)
T ss_pred cEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc
Confidence 4899999998877665543 36999999999999999999999999999999999999999999999999999865432
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
.....++..|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++.+.+..|.......
T Consensus 172 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07851 172 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSES 247 (343)
T ss_pred ----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchh
Confidence 3445788999999988664567899999999999999999999999999999999999988888877665433211
Q ss_pred CccCCCC--cccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 353 ATIFKPQ--QSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 353 ~~~~~~~--~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
...+... ..........+..+++++.+||.+||..||.+|||+.++|+||||...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~ 304 (343)
T cd07851 248 ARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEY 304 (343)
T ss_pred HHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcccc
Confidence 1111000 000001122334568899999999999999999999999999999864
No 169
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-45 Score=364.99 Aligned_cols=257 Identities=23% Similarity=0.388 Sum_probs=224.7
Q ss_pred Ceeee--eeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 119 TFEKL--DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 119 ~y~~~--~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
-|++. +.||+|.||+||-|+++.+|+.||||+|++..+.......+++|+.||+.++||.||.+.-.|+. ...+|+
T Consensus 563 vYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET--~ervFV 640 (888)
T KOG4236|consen 563 VYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET--PERVFV 640 (888)
T ss_pred HHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC--CceEEE
Confidence 35554 68999999999999999999999999999988877777889999999999999999999988887 567999
Q ss_pred EEeeccCChhhhhhC-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC---CcEEEeecccccccCCC
Q 011041 197 VFKYMEHDLAGLAAS-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE---GILTIADFGLASFFDPN 272 (495)
Q Consensus 197 v~e~~~~~l~~~~~~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~---~~vkL~DFG~a~~~~~~ 272 (495)
|||-+.|+.+..++. ..++|+|...+.++.||+.||.|||-+||+|+||||||||+... -++||||||+|++++..
T Consensus 641 VMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk 720 (888)
T KOG4236|consen 641 VMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK 720 (888)
T ss_pred EehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchh
Confidence 999999999887764 56789999999999999999999999999999999999999654 37999999999998654
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
....+.+|||.|+|||++.. +.|+..-|+||.|||+|.-|+|.-||... +++-.+|.+.-...+...|
T Consensus 721 --sFRrsVVGTPAYLaPEVLrn-kGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMyPp~PW------- 788 (888)
T KOG4236|consen 721 --SFRRSVVGTPAYLAPEVLRN-KGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMYPPNPW------- 788 (888)
T ss_pred --hhhhhhcCCccccCHHHHhh-ccccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccccCCCch-------
Confidence 44577899999999999976 67999999999999999999999888643 4455556554444444444
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
+.+++.++|||..+|++.-.+|.+.+..|.|||+++.
T Consensus 789 ------------------~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 789 ------------------SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred ------------------hhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 4588999999999999999999999999999999874
No 170
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.5e-43 Score=349.27 Aligned_cols=257 Identities=27% Similarity=0.433 Sum_probs=217.0
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++.+.||+|+||.||++.+..+++.||+|++..... .......+.+|+++|++++||||+++++++.+ ...+|+
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~ 78 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD--DSNLYL 78 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc--CCeEEE
Confidence 479999999999999999999999999999999875433 33455678899999999999999999999987 567999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+.++.+.........+++..+..++.||+.||.|||++||+|+||+|.||||+.++.+||+|||++......
T Consensus 79 v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---- 154 (290)
T cd05580 79 VMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---- 154 (290)
T ss_pred EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----
Confidence 9999976655555555568999999999999999999999999999999999999999999999999999876433
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
.....+++.|+|||.+.+ ..++.++|||||||++|+|++|..||...+......++... .+
T Consensus 155 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~---------------- 215 (290)
T cd05580 155 TYTLCGTPEYLAPEIILS-KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG--KV---------------- 215 (290)
T ss_pred CCCCCCCccccChhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--Cc----------------
Confidence 234468999999998865 46788999999999999999999999887766555555321 10
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPYA 410 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~~ 410 (495)
.....+++.+.++|.+||..||.+|+ +++++++||||....|.
T Consensus 216 -----------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 263 (290)
T cd05580 216 -----------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWI 263 (290)
T ss_pred -----------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHH
Confidence 11123567889999999999999999 99999999999886653
No 171
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.4e-43 Score=356.97 Aligned_cols=286 Identities=34% Similarity=0.593 Sum_probs=221.2
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC-----
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS----- 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~----- 191 (495)
.++|.+.+.||.|+||.||+|++..+|..||+|++..... ...+.+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 4789999999999999999999999999999999876543 344667889999999999999999987765321
Q ss_pred -------ceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC-CCcEEEeec
Q 011041 192 -------CSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN-EGILTIADF 263 (495)
Q Consensus 192 -------~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~-~~~vkL~DF 263 (495)
...|+||||+++++...+.. ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 82 VGSLTELNSVYIVQEYMETDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred cccccccceEEEEeecccccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCc
Confidence 35799999999876655533 36899999999999999999999999999999999999975 567899999
Q ss_pred ccccccCCCCC--CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC
Q 011041 264 GLASFFDPNHK--QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPS 341 (495)
Q Consensus 264 G~a~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~ 341 (495)
|++........ .......++..|+|||++.+...++.++|||||||++|+|++|..||.+.+..+....+........
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07854 160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR 239 (342)
T ss_pred ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 99976543211 1122346788999999876656688999999999999999999999999988888777766544433
Q ss_pred hhhhhhC--CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 342 EEYWKKS--KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 342 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
...+... ..+.. ..................++.++.+||.+||+.||.+|||+.++|.||||+..
T Consensus 240 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 240 EEDRNELLNVIPSF-VRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred hHHhhhhhhhhhhh-hhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence 3222110 00000 00000111111223345678889999999999999999999999999999853
No 172
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=8.2e-43 Score=354.61 Aligned_cols=285 Identities=35% Similarity=0.563 Sum_probs=226.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC----Cc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM----SC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~ 192 (495)
.++|++++.||+|+||.||+|.+..+|+.||+|++..........+.+.+|+.+++.++|+||+++++++.... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 95 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccc
Confidence 37899999999999999999999999999999999765433444566788999999999999999999885421 24
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
..|++++++++++...... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~~~lv~~~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~- 172 (345)
T cd07877 96 DVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD- 172 (345)
T ss_pred cEEEEehhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc-
Confidence 5789999987766554432 3689999999999999999999999999999999999999999999999999876432
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
......+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+....+..+....+.+....+.......
T Consensus 173 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (345)
T cd07877 173 ---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 249 (345)
T ss_pred ---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHh
Confidence 22345789999999988765568899999999999999999999999988888888888888777766554321110
Q ss_pred CccCCC--CcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 353 ATIFKP--QQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 353 ~~~~~~--~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
...+.. ...............++++.+||.+||+.||.+|+|+.++|+||||+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~ 306 (345)
T cd07877 250 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 306 (345)
T ss_pred HHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhc
Confidence 000000 0000000112223467889999999999999999999999999999863
No 173
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.2e-43 Score=346.60 Aligned_cols=256 Identities=22% Similarity=0.338 Sum_probs=207.0
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|++++.||+|+||.||+|++..+++.||+|++.... .......+.+|+.++++++||||+++++++.. ....++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 77 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFV--ENRISIC 77 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE--CCEEEEE
Confidence 36889999999999999999999999999999997653 34455678899999999999999999999987 5678999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
|||++++.+... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++...... ..
T Consensus 78 ~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---~~ 150 (279)
T cd06619 78 TEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---IA 150 (279)
T ss_pred EecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc---cc
Confidence 999998876543 35789999999999999999999999999999999999999999999999999765432 22
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVE---QLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~---~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
...+||..|+|||++.+ ..++.++|||||||++|+|++|+.||....... ....+.........
T Consensus 151 ~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------------ 217 (279)
T cd06619 151 KTYVGTNAYMAPERISG-EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP------------ 217 (279)
T ss_pred cCCCCChhhcCceeecC-CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC------------
Confidence 34578999999999876 468999999999999999999999997532111 00111111100000
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
.......+++++.+||.+||..||.+||++.++++||||...
T Consensus 218 -----------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~ 259 (279)
T cd06619 218 -----------PVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY 259 (279)
T ss_pred -----------CCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence 000112356788999999999999999999999999999763
No 174
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=6.5e-43 Score=338.68 Aligned_cols=254 Identities=25% Similarity=0.362 Sum_probs=214.3
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|.+.+.||+|+||.||+|++..++..|++|.+............+.+|+.+++.++||||+++++++.. ....|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD--KGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc--CCEEEEEE
Confidence 4888999999999999999999999999999998766666667788899999999999999999999887 56899999
Q ss_pred eeccCChhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 199 KYMEHDLAGLAASP--TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 199 e~~~~~l~~~~~~~--~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||+.++.+..+... ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++..+.... ..
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-~~ 157 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-NF 157 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc-ch
Confidence 99987555444322 4578999999999999999999999999999999999999999999999999988765432 22
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
.....|++.|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+.....
T Consensus 158 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------------------ 218 (256)
T cd08529 158 ANTIVGTPYYLSPELCED-KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF------------------ 218 (256)
T ss_pred hhccccCccccCHHHhcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC------------------
Confidence 234578899999998876 4578999999999999999999999998887666655533110
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
......++.++.++|.+||+.||++||++.++++|||+
T Consensus 219 ----------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 219 ----------PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred ----------CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 01112466788999999999999999999999999995
No 175
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.1e-43 Score=357.63 Aligned_cols=254 Identities=23% Similarity=0.364 Sum_probs=198.7
Q ss_pred CCCeeeeeeecccCceEEEEEEE-----CCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARD-----TLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRM 190 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~-----~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~ 190 (495)
.++|++.+.||+|+||.||+|.+ ..++..||+|++.... .......+.+|+.+|..+ +||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~- 83 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACTKP- 83 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC-
Confidence 36899999999999999999975 3456789999987442 334456788999999999 899999999988653
Q ss_pred CceeEEEEeeccCChhhhhhCC----------------------------------------------------------
Q 011041 191 SCSLYLVFKYMEHDLAGLAASP---------------------------------------------------------- 212 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~~---------------------------------------------------------- 212 (495)
...+|+||||+.++.+..++..
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 4568999999997655433321
Q ss_pred ----CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC-CCCccccccCCCC
Q 011041 213 ----TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK-QPMTSRVVTLWYR 287 (495)
Q Consensus 213 ----~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~ 287 (495)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ .......+++.|+
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 243 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWM 243 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcccc
Confidence 12478889999999999999999999999999999999999999999999999976532211 1112334577899
Q ss_pred CcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCccccccc
Q 011041 288 PPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCI 366 (495)
Q Consensus 288 aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (495)
|||++.+ ..++.++|||||||+||||++ |.+||.+....+.+...+.. +..
T Consensus 244 aPE~~~~-~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~~-------------------------- 295 (338)
T cd05102 244 APESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD-GTR-------------------------- 295 (338)
T ss_pred CcHHhhc-CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc-CCC--------------------------
Confidence 9999876 568999999999999999997 99999886544433332221 000
Q ss_pred ccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 367 AETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 367 ~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
......+++++.+||.+||..||.+|||+.++++
T Consensus 296 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 296 MRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 0011345678899999999999999999999986
No 176
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.3e-43 Score=350.30 Aligned_cols=279 Identities=24% Similarity=0.335 Sum_probs=212.3
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|++.+.||+|+||.||++.+..++..||+|.+.... .......+.+|++++++++||||+++++++.. +..+|+|
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 77 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYS--DGEISIC 77 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee--CCEEEEE
Confidence 46999999999999999999999999999999987542 34455678899999999999999999999987 5689999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
|||+.++.+..+......+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||+|||++...... .
T Consensus 78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---~ 154 (308)
T cd06615 78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M 154 (308)
T ss_pred eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc---c
Confidence 9999987766666555679999999999999999999997 69999999999999999999999999998755322 1
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
....+|++.|+|||++.+ ..++.++|||||||++|+|++|..||...+..... .++........ +...........
T Consensus 155 ~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~ 230 (308)
T cd06615 155 ANSFVGTRSYMSPERLQG-THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE-AMFGRPVSEGE--AKESHRPVSGHP 230 (308)
T ss_pred cccCCCCcCccChhHhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH-HhhcCcccccc--ccCCcccccCCC
Confidence 234578999999998866 46889999999999999999999999876643332 22211110000 000000000000
Q ss_pred CCCcc-------ccccccc-----ccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 357 KPQQS-------YKRCIAE-----TFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 357 ~~~~~-------~~~~~~~-----~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
..... ....... ....++.++.+||.+||..||++|||+.++++||||..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 292 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR 292 (308)
T ss_pred CCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhh
Confidence 00000 0000000 01125677999999999999999999999999999975
No 177
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.5e-43 Score=343.39 Aligned_cols=257 Identities=25% Similarity=0.409 Sum_probs=208.8
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|.+.+.||+|+||.||+|++..+++.||+|++.... ......+.+|+.+++.++||||+++++++.. ...+|+|
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~--~~~~~lv 84 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLR--RDKLWIC 84 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEe--CCEEEEE
Confidence 58999999999999999999999999999999987553 2334567889999999999999999999877 5679999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
|||++++.+..+......+++.++..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++....... ...
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-~~~ 163 (267)
T cd06645 85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI-AKR 163 (267)
T ss_pred EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc-ccc
Confidence 9999987666655555679999999999999999999999999999999999999999999999999987654322 222
Q ss_pred ccccccCCCCCccccc--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 278 TSRVVTLWYRPPELLL--GATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~--~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
....|++.|+|||++. ....++.++|||||||++|+|++|.+||...........+... ......
T Consensus 164 ~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~--~~~~~~----------- 230 (267)
T cd06645 164 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS--NFQPPK----------- 230 (267)
T ss_pred ccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc--CCCCCc-----------
Confidence 4457899999999874 2345788999999999999999999999766544433332211 000000
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEF 403 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~ 403 (495)
......++..+.+||.+||..||.+|||+.++|+|||
T Consensus 231 -----------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 231 -----------LKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred -----------ccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 0011235677899999999999999999999999998
No 178
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=8.5e-43 Score=340.84 Aligned_cols=259 Identities=27% Similarity=0.448 Sum_probs=208.2
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC---ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL---EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
.+|+..+.||+|+||.||+|.+..++..||+|++..... .......+.+|+.+++.++||||+++++++.......+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 368899999999999999999999999999999876532 23445678899999999999999999999876545788
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC-
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH- 273 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~- 273 (495)
+++|||+.++.+.........+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 9999999876665555555578999999999999999999999999999999999999999999999999987653211
Q ss_pred -CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 274 -KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 274 -~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
........++..|+|||++.+ ..++.++|||||||++|+|++|++||...........+......+
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~------------ 228 (266)
T cd06651 162 SGTGIRSVTGTPYWMSPEVISG-EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNP------------ 228 (266)
T ss_pred cCCccccCCccccccCHHHhCC-CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCC------------
Confidence 111223457899999998876 567899999999999999999999998765544443332111000
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
.....+++.+.+|| .||..||.+|||++|+++||||+
T Consensus 229 ---------------~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 229 ---------------QLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred ---------------CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 01123456678888 57778999999999999999996
No 179
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=6.8e-43 Score=340.42 Aligned_cols=261 Identities=26% Similarity=0.403 Sum_probs=215.1
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|++++.||.|+||+||+|.+..++..||+|++....... ....+.+|+.+|+.++|+||+++++.+.. ....|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~iv 77 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVV--GDELWLV 77 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEee--CCEEEEE
Confidence 47999999999999999999999999999999987655433 56788999999999999999999998877 5689999
Q ss_pred EeeccCChhhhhhCC---CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 198 FKYMEHDLAGLAASP---TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~---~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
|||+.++.+...... ...+++..+..++.||+.||.|||++||+||||||+||++++++.++|+|||++..+.....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999987665554432 24689999999999999999999999999999999999999999999999999976654322
Q ss_pred C---CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 275 Q---PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 275 ~---~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
. .....+|+..|++||++.....++.++|+|||||++|+|++|+.||...+....+.++.... +. . +.
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~--~~-~-~~----- 228 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND--PP-S-LE----- 228 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCC--CC-C-cC-----
Confidence 2 12334689999999998765468899999999999999999999998877666555543320 00 0 00
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.......+++.+.+||.+||..||.+|||+.++++||||
T Consensus 229 --------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 229 --------------TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred --------------CccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 001124577889999999999999999999999999998
No 180
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=7.9e-43 Score=340.66 Aligned_cols=255 Identities=28% Similarity=0.514 Sum_probs=210.0
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCC-------hHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLE-------PESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~-------~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
+|.+...||+|+||.||+|.+..++..||+|.+...... ....+.+.+|+.+++.++||||+++++++.. .
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 78 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD--A 78 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe--C
Confidence 477888999999999999999999999999998755332 1234578899999999999999999999877 5
Q ss_pred ceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 192 CSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
...+++|||+.++.+..+......+++..+..++.||+.||.|||++||+||||+|+|||++.++.++|+|||++.....
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 79 DHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred CccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 67899999998876666665556789999999999999999999999999999999999999999999999999987642
Q ss_pred CCC-----CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhh
Q 011041 272 NHK-----QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWK 346 (495)
Q Consensus 272 ~~~-----~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 346 (495)
... .......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+......++....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------- 228 (267)
T cd06628 159 NSLSTKTNGARPSLQGSVFWMAPEVVKQ-TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENA--------- 228 (267)
T ss_pred ccccCCccccccccCCCcCccChhHhcc-CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccC---------
Confidence 211 11123457889999998876 467889999999999999999999998876655444432210
Q ss_pred hCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 347 KSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.......++..+.+||.+||+.||.+||++.++++||||
T Consensus 229 -------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 229 -------------------SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred -------------------CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 011123467788999999999999999999999999998
No 181
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-43 Score=326.55 Aligned_cols=261 Identities=23% Similarity=0.371 Sum_probs=220.0
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCcee
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~ 194 (495)
..++.+++..||.|+.|+|++++.+.+|...|||.+.... +.+...++.+.+.++..- ++|+||+++|+|.. +..+
T Consensus 90 dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~--n~dV 166 (391)
T KOG0983|consen 90 DINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT--NTDV 166 (391)
T ss_pred ChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee--CchH
Confidence 3567788899999999999999999999999999998764 445556677777776655 59999999999987 4568
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH 273 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~ 273 (495)
+|-||.|......++..-.+.++|..+-++...++.||.||.+ +||||||+||+|||||+.|++||||||++-++....
T Consensus 167 ~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk 246 (391)
T KOG0983|consen 167 FICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK 246 (391)
T ss_pred HHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccc
Confidence 9999999987777777767789999999999999999999985 689999999999999999999999999998775432
Q ss_pred CCCCccccccCCCCCcccccC--CCCCCchhhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 274 KQPMTSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAEKPIMPG-RTEVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DvwSlGvil~elltG~~pf~~-~~~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
..+...|-+.|||||.+.- ...|+..+||||||++|+||.||..||.+ .++.+.+.+|++.. |+
T Consensus 247 --AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~e--PP--------- 313 (391)
T KOG0983|consen 247 --AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEE--PP--------- 313 (391)
T ss_pred --ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcC--CC---------
Confidence 2345578999999999843 35689999999999999999999999998 56778888887621 11
Q ss_pred CCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 351 PHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
.......||+.+.+|+..||++|+.+||...++|+|||+...
T Consensus 314 ---------------~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 314 ---------------LLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred ---------------CCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 111223489999999999999999999999999999999864
No 182
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.6e-43 Score=342.52 Aligned_cols=258 Identities=25% Similarity=0.397 Sum_probs=207.6
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|++++.||+|+||.||+|++..+++.||+|++..... .....+.+|+.+++.++||||+++++++.. ...+|+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~--~~~~~i 83 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLS--REKLWI 83 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEe--CCEEEE
Confidence 3679999999999999999999999999999999875432 334567889999999999999999999877 567999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||++++.+..+......+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... ..
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-~~ 162 (267)
T cd06646 84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI-AK 162 (267)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccc-cc
Confidence 99999987666555555678999999999999999999999999999999999999999999999999998664322 12
Q ss_pred CccccccCCCCCcccccC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 277 MTSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~--~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
.....|++.|+|||.+.+ ...++.++|||||||++|+|++|.+||...+..+....+......+
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 228 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQP-------------- 228 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCC--------------
Confidence 234568899999998742 3447789999999999999999999997654433222221100000
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEF 403 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~ 403 (495)
. .......++..+.+||.+||..||++|||++++|+|+|
T Consensus 229 ----~------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 229 ----P------KLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred ----C------CCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 0 00112346778999999999999999999999999987
No 183
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.2e-42 Score=344.67 Aligned_cols=259 Identities=25% Similarity=0.399 Sum_probs=212.8
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
+.|++++.||.|+||.||+|++..++..|++|++... .......+.+|+.+++.++|+||+++++++.. +...|+|
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 87 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYW--DGKLWIM 87 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe--CCeEEEE
Confidence 6799999999999999999999999999999998754 34556778889999999999999999999876 5679999
Q ss_pred EeeccCChhhhh-hCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 198 FKYMEHDLAGLA-ASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 198 ~e~~~~~l~~~~-~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
|||+.++.+..+ ......+++..+..++.||+.+|.|||++||+||||||+|||++.++.+||+|||++....... ..
T Consensus 88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~~ 166 (292)
T cd06644 88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-QR 166 (292)
T ss_pred EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccc-cc
Confidence 999998766544 3445578999999999999999999999999999999999999999999999999987543221 22
Q ss_pred CccccccCCCCCcccccC----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 277 MTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~----~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
.....+++.|+|||++.+ ...++.++|||||||++|+|++|.+||...+......++.... ++
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--~~----------- 233 (292)
T cd06644 167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE--PP----------- 233 (292)
T ss_pred cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCC--Cc-----------
Confidence 234568899999998853 2447889999999999999999999998877655544443210 00
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
.......++.++.+||.+||..||.+||++.++|+||||...
T Consensus 234 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 275 (292)
T cd06644 234 -------------TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSV 275 (292)
T ss_pred -------------cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 001123456778999999999999999999999999999864
No 184
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.7e-42 Score=341.45 Aligned_cols=280 Identities=39% Similarity=0.672 Sum_probs=223.9
Q ss_pred eeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC---CCCCeeeeeceeeccCC---ce
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL---DHPNVVKLEGLVTSRMS---CS 193 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l---~HpnIv~l~~~~~~~~~---~~ 193 (495)
|++.+.||+|+||.||+|+++.++..||+|++............+.+|+.+++++ +|+||+++++++..... ..
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6789999999999999999998999999999976543333344566788887776 59999999999876321 24
Q ss_pred eEEEEeeccCChhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 194 LYLVFKYMEHDLAGLAASP-TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~-~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
++++|||+.+++...+... ...+++..+..++.||+.||.|||++||+|+||+|+|||++.++.+||+|||++..+...
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~ 160 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE 160 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC
Confidence 8999999998776655432 236899999999999999999999999999999999999999999999999999876433
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
. ......++..|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+.+++...+.+....|.......
T Consensus 161 ~--~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07838 161 M--ALTSVVVTLWYRAPEVLLQ-SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLP 237 (287)
T ss_pred c--ccccccccccccChHHhcc-CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccc
Confidence 2 2234467889999999876 467899999999999999999999999999999999998887777666654322111
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
...+. .............+++.+.+||.+||..||.+||++.++|+||||
T Consensus 238 ~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 238 RSSFP--SYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred hhhcc--cccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 11111 111112233445667889999999999999999999999999998
No 185
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.1e-42 Score=347.19 Aligned_cols=265 Identities=28% Similarity=0.337 Sum_probs=217.3
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++++.||+|+||.||++.+..+++.|++|.+..... .......+.+|+.+++.++||||+++++.+.. ...+|+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~l 78 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET--KRHLCM 78 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec--CCEEEE
Confidence 479999999999999999999999999999999876543 23445678899999999999999999999877 568999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC--
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK-- 274 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~-- 274 (495)
||||++++.+..+......+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++........
T Consensus 79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 79 VMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 999999876666665556799999999999999999999999999999999999999999999999999864211100
Q ss_pred ------------CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCh
Q 011041 275 ------------QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSE 342 (495)
Q Consensus 275 ------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~ 342 (495)
.......++..|+|||.+.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~- 236 (305)
T cd05609 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP- 236 (305)
T ss_pred ccccccccchhhccccCCccCccccCchhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCC-
Confidence 01112457889999998876 5689999999999999999999999998877776666543211100
Q ss_pred hhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC---HHHHHhCCCCCCCCCCC
Q 011041 343 EYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT---ATAALRSEFFTTKPYAC 411 (495)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t---a~elL~hp~f~~~~~~~ 411 (495)
.....+++++.+||.+||..||.+||+ +.++|+||||....|..
T Consensus 237 -------------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~~ 283 (305)
T cd05609 237 -------------------------EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNG 283 (305)
T ss_pred -------------------------CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHHH
Confidence 001246778899999999999999998 89999999998866643
No 186
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-46 Score=348.04 Aligned_cols=257 Identities=25% Similarity=0.452 Sum_probs=214.5
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
+-|.++++||+|+||.||+|.++.+|+.+|||.+..+ ...+.+..||.||++++.|++|++||.|.. ...+|||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK--~sDLWIV 106 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFK--HSDLWIV 106 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhcc--CCceEee
Confidence 4588999999999999999999999999999998754 345677889999999999999999998766 4569999
Q ss_pred EeeccCChhhh-hhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 198 FKYMEHDLAGL-AASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 198 ~e~~~~~l~~~-~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+-+...+ +..+++.|+|.++..+++..+.||+|||...-||||||..|||++.+|..||+|||.|..+... -..
T Consensus 107 MEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT-MAK 185 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT-MAK 185 (502)
T ss_pred hhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhh-HHh
Confidence 99999665554 4456778999999999999999999999999999999999999999999999999999765432 234
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
..+.+|||.|||||++.. -.|+..+||||||++..||.-|+|||.+-.+. ..|+-....|++.+
T Consensus 186 RNTVIGTPFWMAPEVI~E-IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM---RAIFMIPT~PPPTF------------ 249 (502)
T KOG0574|consen 186 RNTVIGTPFWMAPEVIEE-IGYDTKADIWSLGITAIEMAEGRPPYSDIHPM---RAIFMIPTKPPPTF------------ 249 (502)
T ss_pred hCccccCcccccHHHHHH-hccchhhhHhhhcchhhhhhcCCCCccccccc---ceeEeccCCCCCCC------------
Confidence 567899999999999865 56899999999999999999999999765543 23332222222211
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKP 408 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~ 408 (495)
......+.++-|||+.||.++|++|-||.++++|||+++.+
T Consensus 250 -----------~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 250 -----------KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAP 290 (502)
T ss_pred -----------CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence 11223567888999999999999999999999999998753
No 187
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.2e-42 Score=349.52 Aligned_cols=286 Identities=36% Similarity=0.580 Sum_probs=227.3
Q ss_pred CeeeeeeecccCceEEEEEEECCC--CeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeec--cCCce
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLT--GQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTS--RMSCS 193 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~--g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~--~~~~~ 193 (495)
+|++.+.||+|+||.||++++..+ +..||+|++............+.+|+.+++++ +||||++++++... .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 488999999999999999999888 89999999875433333455677899999999 59999999986532 12356
Q ss_pred eEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 011041 194 LYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH 273 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~ 273 (495)
+|++++|+++++...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+....
T Consensus 81 ~~~~~e~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~ 159 (332)
T cd07857 81 LYLYEELMEADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP 159 (332)
T ss_pred EEEEEecccCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence 899999999877666543 4579999999999999999999999999999999999999999999999999998654322
Q ss_pred C---CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 274 K---QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 274 ~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
. ......+||+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+....+..++...+.++.+.+.....
T Consensus 160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (332)
T cd07857 160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGS 239 (332)
T ss_pred ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhh
Confidence 1 1123457899999999887656689999999999999999999999999999999999999999888766544322
Q ss_pred CCCccC---CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 351 PHATIF---KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 351 ~~~~~~---~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
+....+ ..... ...+.......+..+.+||.+||+.||.+|||+.++|.||||..
T Consensus 240 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~ 297 (332)
T cd07857 240 PKAQNYIRSLPNIP-KKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAI 297 (332)
T ss_pred hhHHHHHHhccccC-CcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhh
Confidence 111000 00000 00112223445778999999999999999999999999999974
No 188
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.1e-42 Score=342.89 Aligned_cols=258 Identities=25% Similarity=0.371 Sum_probs=213.1
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
.|++++.||+|+||.||++.+..++..+++|.+... .......+.+|+.+++.++|+||+++++++.. ....|+||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--~~~~~~v~ 81 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYY--ENNLWILI 81 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee--CCEEEEEE
Confidence 478889999999999999999999999999998643 24455678889999999999999999999877 56799999
Q ss_pred eeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 199 KYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 199 e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
||+.++.+.... .....+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....... ...
T Consensus 82 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~~ 160 (282)
T cd06643 82 EFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRR 160 (282)
T ss_pred EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccc-ccc
Confidence 999987665543 345579999999999999999999999999999999999999999999999999987653221 223
Q ss_pred ccccccCCCCCcccccC----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 278 TSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~----~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
....+++.|+|||++.. ...++.++|||||||++|+|++|.+||...+..+....+.......
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~------------- 227 (282)
T cd06643 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT------------- 227 (282)
T ss_pred ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCC-------------
Confidence 34578999999998742 2457789999999999999999999999887766665554321100
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
......++.++.+||.+||..||.+|||+.++++||||+..
T Consensus 228 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 228 -------------LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred -------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 00113467789999999999999999999999999999863
No 189
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.2e-43 Score=345.29 Aligned_cols=259 Identities=21% Similarity=0.383 Sum_probs=211.7
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|++++.||+|+||.||++++..+|..||+|.+... ........+.+|+.++++++|+||+++++++.. ...+|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv 77 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE-LDESKFNQIIMELDILHKAVSPYIVDFYGAFFI--EGAVYMC 77 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec--CCeEEEE
Confidence 4789999999999999999999999999999998754 234445678899999999999999999999887 5689999
Q ss_pred EeeccCChhhhhhCC---CCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 011041 198 FKYMEHDLAGLAASP---TIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH 273 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~---~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~ 273 (495)
|||+.++.+..+... ...+++..+..++.||+.||.|||+ +||+||||||+|||++.++.+||+|||++..+....
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 999998766555443 2378999999999999999999996 699999999999999999999999999987653221
Q ss_pred CCCCccccccCCCCCcccccCC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGA-----TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~-----~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 348 (495)
.....+++.|+|||++.+. ..++.++|||||||++|+|++|..||...+.......+........
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------- 227 (286)
T cd06622 158 ---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP------- 227 (286)
T ss_pred ---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC-------
Confidence 2344678899999988542 2357899999999999999999999987655544444332221111
Q ss_pred CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 349 KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
......+++++.+||.+||..||.+||++.+++.||||...
T Consensus 228 ------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~ 268 (286)
T cd06622 228 ------------------PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY 268 (286)
T ss_pred ------------------CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhc
Confidence 01123467888999999999999999999999999999764
No 190
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=7e-43 Score=343.84 Aligned_cols=259 Identities=26% Similarity=0.425 Sum_probs=214.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|++++.||.|+||.||++.+..++..||+|++... .......+.+|+.+++.++|+||+++++++.. ....|+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 79 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFY--ENKLWI 79 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEec--CCeEEE
Confidence 36799999999999999999999989999999998754 34455678899999999999999999999987 567999
Q ss_pred EEeeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 197 VFKYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 197 v~e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
||||++++.+..+. .....+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++....... .
T Consensus 80 v~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~ 158 (280)
T cd06611 80 LIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-Q 158 (280)
T ss_pred EeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccc-c
Confidence 99999987665554 334579999999999999999999999999999999999999999999999999987653322 2
Q ss_pred CCccccccCCCCCcccccC----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 276 PMTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~----~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
......+++.|++||++.. ...++.++|||||||++|+|++|.+||.+.+....+.++.... ++
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~---------- 226 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSE--PP---------- 226 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCC--CC----------
Confidence 2234578999999998752 2346789999999999999999999998877666555543211 00
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.......++.++.+||..||..||.+||++.++|+||||..
T Consensus 227 --------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (280)
T cd06611 227 --------------TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267 (280)
T ss_pred --------------CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence 00111246778899999999999999999999999999986
No 191
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.5e-42 Score=341.55 Aligned_cols=258 Identities=24% Similarity=0.390 Sum_probs=205.0
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHH-HHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILI-LRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~i-l~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++.+.||+|+||.||++++..+|+.||||++.......... .+..|+.+ ++.++||||+++++++.. +..+|+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~iv~~~~~~~~--~~~~~l 77 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQK-RLLMDLDISMRSVDCPYTVTFYGALFR--EGDVWI 77 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHH-HHHHHHHHHHHHcCCCCeeeeeEEEec--CCcEEE
Confidence 47999999999999999999999999999999998654333333 44456554 666799999999999976 567999
Q ss_pred EEeeccCChhhhhh---CCCCCCCHHHHHHHHHHHHHHHHHhhhC-CceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 197 VFKYMEHDLAGLAA---SPTIKFTQAQVKCYMHQLLSGLEHCHNQ-HVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 197 v~e~~~~~l~~~~~---~~~~~l~e~~~~~i~~qil~~L~~LH~~-givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
+|||+++++...+. .....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++..+...
T Consensus 78 v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 78 CMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred EhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 99999987655443 2345799999999999999999999997 9999999999999999999999999999765422
Q ss_pred CCCCCccccccCCCCCcccccCC---CCCCchhhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHhcCCCChhhhhhC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGA---TDYGVGVDLWSAGCILAELLAEKPIMPGR-TEVEQLHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~---~~~~~~~DvwSlGvil~elltG~~pf~~~-~~~~~~~~i~~~~g~~~~~~~~~~ 348 (495)
. ......++..|+|||++.+. ..++.++|+|||||++|+|++|..||... +..+.+..+.... ..
T Consensus 158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~------- 226 (283)
T cd06617 158 V--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEP--SP------- 226 (283)
T ss_pred c--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcC--CC-------
Confidence 1 12335688999999988542 34688999999999999999999999653 3333333332210 00
Q ss_pred CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 349 KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
......+|.++.+||.+||..||.+|||+.+++.||||...
T Consensus 227 ------------------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 267 (283)
T cd06617 227 ------------------QLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH 267 (283)
T ss_pred ------------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence 00012367789999999999999999999999999999874
No 192
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.6e-42 Score=340.22 Aligned_cols=257 Identities=26% Similarity=0.449 Sum_probs=213.6
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|++.+.||.|+||.||+|++..+++.||+|++.... .......+.+|+.+++.++|+||+++++++.+ +..+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v 77 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK--GSKLWII 77 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE--CCeEEEE
Confidence 46889999999999999999999999999999997654 23445667899999999999999999999887 5689999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
+||+.++.+..+.... .+++..++.++.||+.||.|||+++|+|+||+|+||+++.++.++|+|||++....... ...
T Consensus 78 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~ 155 (274)
T cd06609 78 MEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-SKR 155 (274)
T ss_pred EEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc-ccc
Confidence 9999987665555443 78999999999999999999999999999999999999999999999999998775432 223
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFK 357 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 357 (495)
....+++.|+|||++.+ ..++.++|||||||++|+|++|.+||...+.......+.... ++.
T Consensus 156 ~~~~~~~~y~~PE~~~~-~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~~--------------- 217 (274)
T cd06609 156 NTFVGTPFWMAPEVIKQ-SGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN--PPS--------------- 217 (274)
T ss_pred ccccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC--CCC---------------
Confidence 34578899999999876 458999999999999999999999998776555444332210 000
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
+. ...+++++.++|.+||..||.+|||+.++++||||+..
T Consensus 218 --------~~--~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~ 257 (274)
T cd06609 218 --------LE--GNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKA 257 (274)
T ss_pred --------Cc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence 00 01267789999999999999999999999999999863
No 193
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.3e-42 Score=340.33 Aligned_cols=280 Identities=36% Similarity=0.663 Sum_probs=226.3
Q ss_pred eeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCCceeEEEE
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLD-HPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
|++.+.||+|+||.||+|++..+++.|+||.+....... ......+|+..+..++ |+||+++++++.+ +...|+||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~--~~~~~lv~ 77 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNEHPNIVKLKEVFRE--NDELYFVF 77 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccch-hHHHHHHHHHHHHhccCCCCchhHHHHhhc--CCcEEEEE
Confidence 678899999999999999999999999999987543322 2234457999999998 9999999999987 56899999
Q ss_pred eeccCChhhhhhCCC-CCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 199 KYMEHDLAGLAASPT-IKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 199 e~~~~~l~~~~~~~~-~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
||+.+++...+.... ..+++..+..++.||+.+|.|||++||+|+||+|+||+++.++.++|+|||++...... ...
T Consensus 78 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~--~~~ 155 (283)
T cd07830 78 EYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR--PPY 155 (283)
T ss_pred ecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC--CCc
Confidence 999877776665543 47899999999999999999999999999999999999999999999999999866432 223
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc-cC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT-IF 356 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~-~~ 356 (495)
....++..|+|||++.+...++.++|+|||||++++|++|.+||.+.+..+.+.++....+.+..+.|......... ..
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07830 156 TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGF 235 (283)
T ss_pred CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccc
Confidence 44578899999998876566889999999999999999999999999999999999999998887777543211100 00
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.........+...+...+..+.+||.+||..||.+|||+.|++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 236 RFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 000000011222233446789999999999999999999999999998
No 194
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.9e-42 Score=347.25 Aligned_cols=285 Identities=35% Similarity=0.582 Sum_probs=229.6
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
..++|++++.||.|+||.||+|++..+|..||||++.+..........+.+|+.+++.++||||+++++++... ....|
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-~~~~~ 86 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP-LEDIY 86 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC-CCcEE
Confidence 35789999999999999999999999999999999876544444456777899999999999999999988653 34689
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
++|||+++++...+.. ..+++..+..++.||+.||.|||++||+||||||.|||++.++.+||+|||++......
T Consensus 87 lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~--- 161 (328)
T cd07856 87 FVTELLGTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ--- 161 (328)
T ss_pred EEeehhccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCC---
Confidence 9999998876655433 35889999999999999999999999999999999999999999999999998755322
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
....++++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+....+..+.+.++.++.+.+..........
T Consensus 162 -~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd07856 162 -MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLR 240 (328)
T ss_pred -cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHH
Confidence 2345678899999988665568999999999999999999999999998888888888888888776654321110000
Q ss_pred CCC--CcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 356 FKP--QQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 356 ~~~--~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
+.. ............+.+++.+.++|.+||+.||.+|||+.++|.||||...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~ 294 (328)
T cd07856 241 FVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPY 294 (328)
T ss_pred HHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccc
Confidence 000 0000111223445678899999999999999999999999999999753
No 195
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.4e-42 Score=335.67 Aligned_cols=256 Identities=28% Similarity=0.483 Sum_probs=214.0
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|++++.||.|+||.||++.+..+|..||+|++............+.+|+.+++.++|+||+++++++.......+|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 58899999999999999999999999999999987666666677888999999999999999999988765567789999
Q ss_pred eeccCChhhhhhC----CCCCCCHHHHHHHHHHHHHHHHHhh-----hCCceeccCCCCCeeeCCCCcEEEeeccccccc
Q 011041 199 KYMEHDLAGLAAS----PTIKFTQAQVKCYMHQLLSGLEHCH-----NQHVLHRDIKGSNLLIDNEGILTIADFGLASFF 269 (495)
Q Consensus 199 e~~~~~l~~~~~~----~~~~l~e~~~~~i~~qil~~L~~LH-----~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~ 269 (495)
||+.++.+..+.. ....+++..+..++.||+.||.||| +.+|+|+||||+||+++.++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 9998765443332 2457899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 270 DPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 270 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
..... ......+++.|+|||++.+ ..++.++|+|||||++|+|++|..||.+.+..+....+....
T Consensus 161 ~~~~~-~~~~~~~~~~~~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------ 226 (265)
T cd08217 161 GHDSS-FAKTYVGTPYYMSPEQLNH-MSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK------------ 226 (265)
T ss_pred cCCcc-cccccccCCCccChhhhcC-CCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC------------
Confidence 54321 1334578999999999876 457899999999999999999999999877555444432210
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.......++..+.+||.+||..||.+|||+.++|+|||+
T Consensus 227 ----------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 227 ----------------FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ----------------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 001123467788999999999999999999999999996
No 196
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.1e-42 Score=336.46 Aligned_cols=259 Identities=27% Similarity=0.436 Sum_probs=209.9
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC---ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL---EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
.+|++.+.||+|+||.||.+++..+|..||||.+..... .......+.+|+.+++.++||||+++++++.+.....+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 479999999999999999999999999999999875432 23456788899999999999999999999876545678
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
|++|||+.++.+.........+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++........
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~ 161 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL 161 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence 99999998876655554545689999999999999999999999999999999999999999999999999876532111
Q ss_pred --CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 275 --QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 275 --~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
.......++..|+|||++.+ ..++.++|||||||++|+|++|++||...+......++.. .+..
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~---------- 227 (265)
T cd06652 162 SGTGMKSVTGTPYWMSPEVISG-EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT---QPTN---------- 227 (265)
T ss_pred cccccccCCCCccccChhhhcC-CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---CCCC----------
Confidence 11233468899999999876 5678999999999999999999999987655544433321 1110
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
......++..+.++|.+||. +|.+||+++++++|||+.
T Consensus 228 --------------~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 228 --------------PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred --------------CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 00112355678899999994 999999999999999984
No 197
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4.3e-42 Score=333.40 Aligned_cols=254 Identities=25% Similarity=0.437 Sum_probs=215.7
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|+.++.||.|+||.||.+++..+++.|++|.+............+.+|+.++++++|+||+++++++.+ ...++++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD--DNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec--CCeEEEEE
Confidence 5899999999999999999999999999999998776666667778899999999999999999999987 56899999
Q ss_pred eeccCChhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 199 KYMEHDLAGLAASP--TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 199 e~~~~~l~~~~~~~--~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||+.++.+...... ...+++..+..++.|++.+|.|||+.|++|+||+|+||+++.++.+||+|||++....... ..
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~-~~ 157 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY-SM 157 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc-cc
Confidence 99987555444332 3568999999999999999999999999999999999999999999999999998764333 12
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
.....+++.|+|||++.+ ..++.++|||||||++|+|++|..||...+..+....+... .+.
T Consensus 158 ~~~~~~~~~y~ape~~~~-~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~~~--------------- 219 (256)
T cd08221 158 AETVVGTPYYMSPELCQG-VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG--NYT--------------- 219 (256)
T ss_pred ccccCCCccccCHhhcCC-CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCC---------------
Confidence 345678999999998876 45788999999999999999999999988877776666431 111
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.....++.++.++|.+||..||.+||++.++|+|+|+
T Consensus 220 -----------~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 220 -----------PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred -----------CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 0113467788999999999999999999999999986
No 198
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.5e-42 Score=339.56 Aligned_cols=256 Identities=25% Similarity=0.422 Sum_probs=205.4
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccC----Cc
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRM----SC 192 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~----~~ 192 (495)
+.|++.+.||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.+ +|+||+++++++.... ..
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC---ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 56889999999999999999999999999999987543 2234677899999998 7999999999986532 24
Q ss_pred eeEEEEeeccCChhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccC
Q 011041 193 SLYLVFKYMEHDLAGLAASP--TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFD 270 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~--~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~ 270 (495)
.+|++|||+.++.+..+... ...+++..+..++.||+.||.|||++||+|+||||+||++++++.+||+|||++....
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~ 162 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 162 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecc
Confidence 68999999987655544332 3468999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCCCccccccCCCCCcccccC----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhh
Q 011041 271 PNHKQPMTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWK 346 (495)
Q Consensus 271 ~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 346 (495)
... .......|++.|+|||++.+ ...|+.++|||||||++|+|++|.+||...........+... +.
T Consensus 163 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~---~~----- 233 (272)
T cd06637 163 RTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---PA----- 233 (272)
T ss_pred ccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC---CC-----
Confidence 322 22345678999999999853 235788999999999999999999999765544333222110 00
Q ss_pred hCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 347 KSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.......++.++.+||.+||..||.+|||+.++++||||
T Consensus 234 -------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 234 -------------------PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred -------------------CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 000112466788999999999999999999999999998
No 199
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.5e-42 Score=343.48 Aligned_cols=257 Identities=25% Similarity=0.463 Sum_probs=212.2
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
..+|++++.||+|+||.||++++..+++.||+|.+...... ....+.+|+.+++.++|+||+++++.+.. ....|+
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~--~~~~~l 94 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLV--GDELWV 94 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEe--CCEEEE
Confidence 36899999999999999999999999999999999765432 34668899999999999999999999887 568999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+.++.+..+... ..+++.++..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....... ..
T Consensus 95 v~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~-~~ 172 (296)
T cd06654 95 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SK 172 (296)
T ss_pred eecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc-cc
Confidence 9999998766555543 358999999999999999999999999999999999999999999999999987654332 12
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
.....+++.|+|||.+.+ ..++.++|||||||++|+|++|++||...+....+..+... +.+.
T Consensus 173 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~--------------- 235 (296)
T cd06654 173 RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPE--------------- 235 (296)
T ss_pred cCcccCCccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-CCCC---------------
Confidence 234578999999998865 55789999999999999999999999887765544333211 0000
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
......+++.+.+||.+||..||.+|||+.++++||||..
T Consensus 236 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 236 ----------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred ----------CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence 0112346677899999999999999999999999999986
No 200
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.7e-42 Score=335.78 Aligned_cols=256 Identities=25% Similarity=0.441 Sum_probs=209.3
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC----ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL----EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~----~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
+|++.+.||+|+||.||+|.+ .+|+.+|+|.+..... .......+.+|+.+++.++|+||+++++++.+ ....
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~ 77 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD--DNTI 77 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec--CCeE
Confidence 478889999999999999986 4788999999875432 23345678899999999999999999999987 5789
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC--
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN-- 272 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~-- 272 (495)
|++|||+.++.+..+......+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++......
T Consensus 78 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 78 SIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 999999998777666655567899999999999999999999999999999999999999999999999998764321
Q ss_pred ---CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 273 ---HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 273 ---~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
.........|+..|+|||++.+ ..++.++|||||||++|+|++|.+||...+.......+....+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------- 226 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINE-SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGL---------- 226 (265)
T ss_pred cccccccccccCCCccccChhhhcC-CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCC----------
Confidence 1112234568999999998875 56789999999999999999999999876655544333221111
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.......++.++.+||.+||..||.+|||+.++|.||||
T Consensus 227 ----------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 227 ----------------MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred ----------------CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 011123467788999999999999999999999999997
No 201
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=4e-42 Score=334.33 Aligned_cols=257 Identities=28% Similarity=0.447 Sum_probs=211.3
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|++.+.||.|+||.||+|.+..++..+++|++..... .....+.+|+.+++.++||||+++++++.+ ...+|++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~l~ 78 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG--DDFEIIQQEISMLKECRHPNIVAYFGSYLR--RDKLWIV 78 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch--hhHHHHHHHHHHHHhCCCCChhceEEEEEe--CCEEEEE
Confidence 689999999999999999999999999999999976542 245778899999999999999999999877 5679999
Q ss_pred EeeccCChhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 198 FKYMEHDLAGLAASP-TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~-~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
|||++++.+..+... ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++....... ..
T Consensus 79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~ 157 (262)
T cd06613 79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-AK 157 (262)
T ss_pred EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhh-hc
Confidence 999998766655543 3689999999999999999999999999999999999999999999999999997664322 12
Q ss_pred CccccccCCCCCcccccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 277 MTSRVVTLWYRPPELLLGA--TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~--~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
.....++..|+|||++.+. ..++.++|||||||++|+|++|.+||.+.+.......+......+.
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~------------- 224 (262)
T cd06613 158 RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPP------------- 224 (262)
T ss_pred cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCc-------------
Confidence 2345788999999988653 2678899999999999999999999988776555444322110000
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEF 403 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~ 403 (495)
.......++.++.+||.+||..||.+|||+.+++.|+|
T Consensus 225 -----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 225 -----------KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred -----------cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 00011234567899999999999999999999999998
No 202
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4e-42 Score=342.06 Aligned_cols=257 Identities=26% Similarity=0.479 Sum_probs=214.8
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
.+|++++.||.|+||.||+|++..+|+.|+||.+..... .....+.+|+.+++.++|+||+++++++.. ...+|+|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 94 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLV--GDELFVV 94 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEec--CceEEEE
Confidence 579999999999999999999999999999999875432 234667899999999999999999999977 5679999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
|||+.++.+..+.... .+++.++..++.||+.||.|||++||+||||||+||+++.++.+||+|||++........ ..
T Consensus 95 ~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~ 172 (296)
T cd06655 95 MEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-KR 172 (296)
T ss_pred EEecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc-cC
Confidence 9999987776655433 689999999999999999999999999999999999999999999999999876543322 22
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFK 357 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 357 (495)
....+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.+.+....+..+... ..+.
T Consensus 173 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~~---------------- 234 (296)
T cd06655 173 STMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPE---------------- 234 (296)
T ss_pred CCcCCCccccCcchhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCcc----------------
Confidence 34568899999998865 56789999999999999999999999988776665544321 1100
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
......+++.+.+||.+||..||.+|||+.+++.||||...
T Consensus 235 ---------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~ 275 (296)
T cd06655 235 ---------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLA 275 (296)
T ss_pred ---------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhc
Confidence 01123467789999999999999999999999999999853
No 203
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.4e-42 Score=334.06 Aligned_cols=254 Identities=22% Similarity=0.457 Sum_probs=212.0
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|++++.||+|+||.||.+++..+|+.||+|.+............+.+|+.+++.++|+||+++++++.. ....|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE--NGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC--CCeEEEEE
Confidence 5899999999999999999999999999999998665555556678899999999999999999999877 56899999
Q ss_pred eeccCChhh-hhhC-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 199 KYMEHDLAG-LAAS-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 199 e~~~~~l~~-~~~~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||+.++.+. .+.. ....+++..+..++.||+.||.|||++|++|+||+|+|||++.++.++|+|||++....... ..
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~ 157 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-EL 157 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch-hh
Confidence 999875444 3333 23368999999999999999999999999999999999999999999999999997664322 11
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
.....|++.|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+.... ..
T Consensus 158 ~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~--~~--------------- 219 (256)
T cd08218 158 ARTCIGTPYYLSPEICEN-RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS--YP--------------- 219 (256)
T ss_pred hhhccCCccccCHHHhCC-CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC--CC---------------
Confidence 223467889999998866 457889999999999999999999998877766666554311 10
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.....++.++.+||.+||+.||.+||++.++|+||||
T Consensus 220 -----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 220 -----------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred -----------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 1123467788999999999999999999999999998
No 204
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=4.1e-42 Score=336.74 Aligned_cols=261 Identities=28% Similarity=0.505 Sum_probs=209.3
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC--------ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL--------EPESVRFMAREILILRRLDHPNVVKLEGLVTSRM 190 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 190 (495)
+|.+.+.||+|+||.||+|.+..+|+.||+|.+..... .....+.+.+|+.+++.++|+||+++++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 79 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-- 79 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc--
Confidence 58888999999999999999999999999999864321 11234567889999999999999999999877
Q ss_pred CceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccC
Q 011041 191 SCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFD 270 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~ 270 (495)
...+++||||+.++.+.........+++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++....
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 80 EEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred CCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 56799999999887666665555689999999999999999999999999999999999999999999999999997653
Q ss_pred CCCCC-CCccccccCCCCCcccccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhC
Q 011041 271 PNHKQ-PMTSRVVTLWYRPPELLLGAT-DYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 271 ~~~~~-~~~~~~gt~~y~aPE~l~~~~-~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 348 (495)
..... ......|+..|+|||++.... .++.++|+|||||++|+|++|..||...+..+.+..+......+.
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------- 232 (272)
T cd06629 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPP------- 232 (272)
T ss_pred ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCc-------
Confidence 22111 123346788999999886543 478899999999999999999999976555444333221100000
Q ss_pred CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 349 KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
........++.++.+||.+||..||.+|||+.++|+||||
T Consensus 233 ----------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 233 ----------------IPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred ----------------CCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 0112234578899999999999999999999999999997
No 205
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.6e-42 Score=336.98 Aligned_cols=260 Identities=30% Similarity=0.531 Sum_probs=209.4
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCC----hHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLE----PESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~----~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
+|+..+.||+|+||.||++.+..+++.||+|++...... ......+.+|+.+++.++|+||+++++++.+ ....
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~ 78 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE--DSHF 78 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc--CCeE
Confidence 478889999999999999999999999999999754321 2245678899999999999999999999987 5679
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC-cEEEeecccccccCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG-ILTIADFGLASFFDPNH 273 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~-~vkL~DFG~a~~~~~~~ 273 (495)
++||||+.++.+..+......+++..+..++.||+.||.|||++||+|+||||+||+++.++ .+||+|||++.......
T Consensus 79 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 79 NLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 99999999877766665556799999999999999999999999999999999999998876 59999999997764321
Q ss_pred C---CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 274 K---QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 274 ~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
. .......++..|+|||++.+ ..++.++|||||||++|+|++|.+||...+.......+........
T Consensus 159 ~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------- 228 (268)
T cd06630 159 TGAGEFQGQLLGTIAFMAPEVLRG-EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT--------- 228 (268)
T ss_pred ccCCccccccccccceeCHhHhcc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC---------
Confidence 1 11123467899999999876 5678999999999999999999999976554333333322110000
Q ss_pred CCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 351 PHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
.......+++++.++|.+||..||.+|||+.++|+||||.
T Consensus 229 ---------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 229 ---------------APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred ---------------CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 0111234677889999999999999999999999999985
No 206
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=6.3e-42 Score=331.76 Aligned_cols=253 Identities=24% Similarity=0.414 Sum_probs=212.3
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|++.+.||+|+||.||+|.+..+++.||+|.+............+.+|+.+|+.++||||+++++.+.. ...+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE--DKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec--CCEEEEEE
Confidence 5899999999999999999999999999999998776666667788999999999999999999998876 56799999
Q ss_pred eeccCChhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC-CcEEEeecccccccCCCCCC
Q 011041 199 KYMEHDLAGLAASP--TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE-GILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 199 e~~~~~l~~~~~~~--~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~-~~vkL~DFG~a~~~~~~~~~ 275 (495)
||+.++.+..+... ...+++..+..++.||+.+|.|||++||+|+||||+||+++.+ +.+||+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-- 156 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-- 156 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc--
Confidence 99987655544432 3458999999999999999999999999999999999999865 468999999998764332
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
......++..|+|||.+.+ ..++.++|||||||++|+|++|..||.+.+.......+.....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------- 218 (256)
T cd08220 157 KAYTVVGTPCYISPELCEG-KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTF----------------- 218 (256)
T ss_pred cccccccCCcccCchhccC-CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCC-----------------
Confidence 2234578999999998876 4578899999999999999999999988776666555533110
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
......+++++.+||..||..||.+|||+.++|+||||
T Consensus 219 -----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 219 -----------APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred -----------CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 01112467889999999999999999999999999997
No 207
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.4e-42 Score=343.73 Aligned_cols=258 Identities=25% Similarity=0.454 Sum_probs=212.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
..+|++++.||+|+||.||++++..+++.||+|.+..... ...+.+.+|+.+++.++|+||+++++++.. ....|+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~l 93 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLV--GDELWV 93 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCEEEE
Confidence 3789999999999999999999999999999999976443 234567899999999999999999999987 568999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||++++.+..+... ..+++.++..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++....... ..
T Consensus 94 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~-~~ 171 (297)
T cd06656 94 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SK 171 (297)
T ss_pred eecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc-cC
Confidence 9999998766665543 358999999999999999999999999999999999999999999999999987654332 22
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
.....+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.+.+....+..+.. .+.+.
T Consensus 172 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~~--------------- 234 (297)
T cd06656 172 RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPE--------------- 234 (297)
T ss_pred cCcccCCccccCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCCC---------------
Confidence 234578999999998876 5678999999999999999999999987665443322211 01110
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
......+++.+.+||.+||..||.+|||+.++|+||||...
T Consensus 235 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (297)
T cd06656 235 ----------LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLA 275 (297)
T ss_pred ----------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccc
Confidence 01123456778899999999999999999999999999863
No 208
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.8e-42 Score=338.25 Aligned_cols=256 Identities=24% Similarity=0.395 Sum_probs=205.9
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeecc----CCc
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSR----MSC 192 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~----~~~ 192 (495)
+.|++.+.||.|+||.||+|++..+++.||+|++.... .....+..|+.+++++ +|+||+++++++... ...
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 92 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDD 92 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCC
Confidence 67999999999999999999999999999999986542 3345678899999998 799999999988532 245
Q ss_pred eeEEEEeeccCChhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccC
Q 011041 193 SLYLVFKYMEHDLAGLAAS--PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFD 270 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~--~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~ 270 (495)
.+|++|||+.++.+..+.. ....+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++....
T Consensus 93 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~ 172 (282)
T cd06636 93 QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 172 (282)
T ss_pred EEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhh
Confidence 7899999998755544332 23458899999999999999999999999999999999999999999999999987654
Q ss_pred CCCCCCCccccccCCCCCcccccC----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhh
Q 011041 271 PNHKQPMTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWK 346 (495)
Q Consensus 271 ~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 346 (495)
... .......|++.|+|||++.. ...++.++|||||||++|+|++|.+||...........+.... .
T Consensus 173 ~~~-~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~---~----- 243 (282)
T cd06636 173 RTV-GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP---P----- 243 (282)
T ss_pred ccc-cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCC---C-----
Confidence 222 12344578999999998753 2457889999999999999999999998765544433321110 0
Q ss_pred hCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 347 KSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.......++.++.+||.+||..||.+|||+.|+|+||||
T Consensus 244 -------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 244 -------------------PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred -------------------CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 001123467889999999999999999999999999997
No 209
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=5.9e-42 Score=338.77 Aligned_cols=244 Identities=18% Similarity=0.184 Sum_probs=203.3
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeec--cCCceeEEEEee
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTS--RMSCSLYLVFKY 200 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~~~~lv~e~ 200 (495)
..||+|++|.||+|.. +|+.||||++..... .....+.+.+|+.+|++++|||||++++++.+ .....+++||||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 5799999999999976 689999999976543 23335778899999999999999999999866 434578999999
Q ss_pred ccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcc
Q 011041 201 MEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTS 279 (495)
Q Consensus 201 ~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~ 279 (495)
+.++.+..+......+++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||++...... ...
T Consensus 104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----~~~ 179 (283)
T PHA02988 104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----PFK 179 (283)
T ss_pred CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc----ccc
Confidence 9998777666666689999999999999999999998 49999999999999999999999999999865432 134
Q ss_pred ccccCCCCCcccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCC
Q 011041 280 RVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKP 358 (495)
Q Consensus 280 ~~gt~~y~aPE~l~~~-~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 358 (495)
.+||+.|+|||++.+. ..|+.++|||||||++|||++|..||.+.+..+.+..+......+.
T Consensus 180 ~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~----------------- 242 (283)
T PHA02988 180 NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLK----------------- 242 (283)
T ss_pred ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC-----------------
Confidence 5788999999998652 4689999999999999999999999998887777666643221111
Q ss_pred CcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 359 QQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 359 ~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....++.+.+||.+||+.||.+|||+.++++
T Consensus 243 ----------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 243 ----------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred ----------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 01246778999999999999999999999986
No 210
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=7.9e-42 Score=341.42 Aligned_cols=255 Identities=27% Similarity=0.471 Sum_probs=213.0
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
..|++.+.||+|+||.||+|++..+|+.||+|++..... .......+.+|+.+++.++||||+++++++.+ ....|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~~~~~l 92 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR--EHTAWL 92 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe--CCeEEE
Confidence 459999999999999999999999999999999875433 34455678899999999999999999999987 567899
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+.+++..........+++..+..++.||+.||.|||++||+||||+|+||+++.++.+||+|||++......
T Consensus 93 v~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~---- 168 (307)
T cd06607 93 VMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA---- 168 (307)
T ss_pred EHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC----
Confidence 9999999887776655567999999999999999999999999999999999999999999999999998765432
Q ss_pred CccccccCCCCCcccccC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 277 MTSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~--~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
....+++.|+|||++.+ ...++.++|||||||++|+|++|.+||.+.+.......+... .++
T Consensus 169 -~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~~~------------- 232 (307)
T cd06607 169 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSP------------- 232 (307)
T ss_pred -CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC--CCC-------------
Confidence 34467889999998753 345788999999999999999999999887765544433210 000
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
......++..+.+||.+||..||.+||++.+++.||||..
T Consensus 233 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 233 ------------TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred ------------CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 0001125667899999999999999999999999999986
No 211
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=7.6e-42 Score=333.00 Aligned_cols=252 Identities=25% Similarity=0.372 Sum_probs=209.3
Q ss_pred ecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCC
Q 011041 126 IGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHD 204 (495)
Q Consensus 126 LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~ 204 (495)
||.|+||.||+|++..++..||+|++.+... .......+.+|+.+++.++||||+++++++.+ ...+|++|||+.++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~ 78 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD--KKYIYMLMEYCLGG 78 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc--CCccEEEEecCCCC
Confidence 6999999999999999999999999986544 33455778999999999999999999999877 56799999999877
Q ss_pred hhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccccccC
Q 011041 205 LAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVVTL 284 (495)
Q Consensus 205 l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~ 284 (495)
.+.........+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++....... ......+++
T Consensus 79 ~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~ 156 (262)
T cd05572 79 ELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFCGTP 156 (262)
T ss_pred cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccccCCc
Confidence 666665555678999999999999999999999999999999999999999999999999998764432 123347889
Q ss_pred CCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCccc
Q 011041 285 WYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRT--EVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSY 362 (495)
Q Consensus 285 ~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~--~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 362 (495)
.|++||++.+ ..++.++|+|||||++|+|++|.+||...+ ..+.+.++......+
T Consensus 157 ~~~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------- 213 (262)
T cd05572 157 EYVAPEIILN-KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKL---------------------- 213 (262)
T ss_pred CccChhHhcC-CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCC----------------------
Confidence 9999998765 467899999999999999999999998876 444554443211000
Q ss_pred ccccccccCCCCCCcHHHHHHhccCCCCCccC-----HHHHHhCCCCCCCCC
Q 011041 363 KRCIAETFKDFPPSSLPLIETLLAIDPAERQT-----ATAALRSEFFTTKPY 409 (495)
Q Consensus 363 ~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----a~elL~hp~f~~~~~ 409 (495)
......++++.+||.+||..||.+|+| +.|+++||||++..|
T Consensus 214 -----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 260 (262)
T cd05572 214 -----EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDW 260 (262)
T ss_pred -----CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCC
Confidence 011224678999999999999999999 999999999987544
No 212
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=5.5e-42 Score=338.10 Aligned_cols=252 Identities=27% Similarity=0.406 Sum_probs=199.0
Q ss_pred eecccCceEEEEEEECCCCeEEEeEEEecCCCCh-HHHHHHHHHHHHHHh---CCCCCeeeeeceeeccCCceeEEEEee
Q 011041 125 KIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEP-ESVRFMAREILILRR---LDHPNVVKLEGLVTSRMSCSLYLVFKY 200 (495)
Q Consensus 125 ~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~---l~HpnIv~l~~~~~~~~~~~~~lv~e~ 200 (495)
.||+|+||.||++.+..+++.||+|.+.+..... .......+|..+++. .+|+||+.+++++.. ....|+||||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~ 78 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT--PDKLCFILDL 78 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec--CCeEEEEEec
Confidence 4899999999999999999999999997654322 222233445444443 479999999998876 4579999999
Q ss_pred ccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccc
Q 011041 201 MEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSR 280 (495)
Q Consensus 201 ~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~ 280 (495)
+.++.+.........+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++....... ....
T Consensus 79 ~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~ 155 (279)
T cd05633 79 MNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHAS 155 (279)
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC---ccCc
Confidence 9987776666556679999999999999999999999999999999999999999999999999987554322 1334
Q ss_pred cccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHhcCCCChhhhhhCCCCCCccCCC
Q 011041 281 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEV--EQLHKIFKLCGSPSEEYWKKSKLPHATIFKP 358 (495)
Q Consensus 281 ~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~--~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 358 (495)
.||+.|+|||++.+...++.++|||||||++|+|++|..||.+.... ..+..+.. ..
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---~~------------------ 214 (279)
T cd05633 156 VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL---TV------------------ 214 (279)
T ss_pred CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh---cC------------------
Confidence 78999999998865456889999999999999999999999764321 11111110 00
Q ss_pred CcccccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCC
Q 011041 359 QQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPY 409 (495)
Q Consensus 359 ~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~ 409 (495)
.......+++++.+||.+||..||.+|+ |+.++++||||+...|
T Consensus 215 -------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~ 263 (279)
T cd05633 215 -------NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDW 263 (279)
T ss_pred -------CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCH
Confidence 0011234678899999999999999999 6999999999998554
No 213
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.3e-42 Score=342.03 Aligned_cols=258 Identities=24% Similarity=0.410 Sum_probs=212.4
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
+.|.....||+|+||.||++.+..++..||||.+.... ....+.+.+|+.+++.++|+||+++++.+.. ....|+|
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--~~~~~lv 97 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLV--GDELWVV 97 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheec--CCeEEEE
Confidence 45666778999999999999999999999999986533 3445668899999999999999999999877 5679999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
|||+.++.+..+... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++....... ...
T Consensus 98 ~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-~~~ 175 (292)
T cd06658 98 MEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-PKR 175 (292)
T ss_pred EeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc-ccC
Confidence 999998776665543 368999999999999999999999999999999999999999999999999987653322 222
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFK 357 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 357 (495)
....|++.|+|||++.+ ..++.++|||||||++|||++|..||.+.+....+..+.......
T Consensus 176 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~----------------- 237 (292)
T cd06658 176 KSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPR----------------- 237 (292)
T ss_pred ceeecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCc-----------------
Confidence 34578999999998865 567899999999999999999999999877766655543211000
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKP 408 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~ 408 (495)
......++..+.+||.+||..||.+|||+.++|+||||...+
T Consensus 238 ---------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~ 279 (292)
T cd06658 238 ---------VKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAG 279 (292)
T ss_pred ---------cccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccC
Confidence 001123567788999999999999999999999999998643
No 214
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.6e-41 Score=330.54 Aligned_cols=258 Identities=27% Similarity=0.490 Sum_probs=212.2
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|++.+.||+|+||.||++.+..+++.|++|.+............+.+|+.+++.++|+||+++++++.. ...+++|+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH--REKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec--CCEEEEEE
Confidence 5889999999999999999999999999999998776555677889999999999999999999998876 56799999
Q ss_pred eeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC--
Q 011041 199 KYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP-- 276 (495)
Q Consensus 199 e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~-- 276 (495)
||+.++.+..+......+++..+..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++..........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~ 158 (264)
T cd06626 79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE 158 (264)
T ss_pred ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccc
Confidence 999988777776666678999999999999999999999999999999999999999999999999998765433221
Q ss_pred -CccccccCCCCCcccccCCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 277 -MTSRVVTLWYRPPELLLGAT--DYGVGVDLWSAGCILAELLAEKPIMPGRTEV-EQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 277 -~~~~~gt~~y~aPE~l~~~~--~~~~~~DvwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
.....+++.|++||++.+.. .++.++|||||||++|+|++|..||...... .....+.. +....
T Consensus 159 ~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~---------- 226 (264)
T cd06626 159 EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA--GHKPP---------- 226 (264)
T ss_pred cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc--CCCCC----------
Confidence 12346788999999987532 3788999999999999999999999765432 22222211 11000
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
......+++.+.+||.+||+.||.+|||+.+++.|||+
T Consensus 227 --------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 227 --------------IPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred --------------CCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00112357788999999999999999999999999996
No 215
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=342.95 Aligned_cols=262 Identities=25% Similarity=0.365 Sum_probs=227.4
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCce
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~ 193 (495)
+..+|.++.+||+|+||.|.+|..+.+.+.||||+++++-. ..+.++--..|-++|... +-|.+++++.+|.. -..
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQT--mDR 424 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQT--MDR 424 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhh--hhh
Confidence 46789999999999999999999999999999999988765 444555556677787776 56789999999987 467
Q ss_pred eEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 011041 194 LYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH 273 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~ 273 (495)
+|+||||+.|+.+-+.+++-+.|.|..+..|+.+|+-||-|||++|||+||||.+||||+.+|+|||+|||+++.--..
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~- 503 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD- 503 (683)
T ss_pred eeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccC-
Confidence 9999999999888888888889999999999999999999999999999999999999999999999999999743222
Q ss_pred CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
.....+.+|||.|+|||++.- .+|+..+|+||+||+||||+.|++||.|.++.+.+..|...--.
T Consensus 504 ~~TTkTFCGTPdYiAPEIi~Y-qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvs-------------- 568 (683)
T KOG0696|consen 504 GVTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVS-------------- 568 (683)
T ss_pred CcceeeecCCCcccccceEEe-cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCc--------------
Confidence 233467899999999998865 68999999999999999999999999999999999999764322
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC-----HHHHHhCCCCCCCCCC
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT-----ATAALRSEFFTTKPYA 410 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----a~elL~hp~f~~~~~~ 410 (495)
..+.+|.++.++++.+|.+.|.+|+. -.++-.||||....|.
T Consensus 569 ---------------yPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWe 615 (683)
T KOG0696|consen 569 ---------------YPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWE 615 (683)
T ss_pred ---------------CcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHH
Confidence 23568889999999999999999965 3678899999987763
No 216
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.1e-41 Score=330.17 Aligned_cols=255 Identities=27% Similarity=0.468 Sum_probs=211.0
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC---ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL---EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
+|+..+.||+|+||+||+|.+..++..|++|.+..... ..+....+.+|+.+++.++|+||+++++++.+ ...+|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~ 78 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE--EDNLY 78 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec--CCeEE
Confidence 47778899999999999999998999999999876432 24456778899999999999999999999876 56799
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+++||++++.+..+......+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.......
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-- 156 (258)
T cd06632 79 IFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-- 156 (258)
T ss_pred EEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc--
Confidence 999999987666665555578999999999999999999999999999999999999999999999999987654332
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
......|+..|++||.+.....++.++|+|||||++|+|++|.+||......+...++.....
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~----------------- 219 (258)
T cd06632 157 FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKE----------------- 219 (258)
T ss_pred cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhccc-----------------
Confidence 234557899999999886543488999999999999999999999987665444443322100
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.......+++++.+||.+||..||.+|||+.++|.|||+
T Consensus 220 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 220 ----------LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred ----------CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 011123467788999999999999999999999999996
No 217
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.6e-42 Score=334.47 Aligned_cols=253 Identities=29% Similarity=0.414 Sum_probs=211.9
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
.|++.+.||.|+||.||+|.+..++..||+|++.+... .....+.+.+|+.++++++||||+++++++.. ....|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 78 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD--EENMYLV 78 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC--CCeEEEE
Confidence 48999999999999999999999999999999986544 33556788999999999999999999999876 5679999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
+||+.++.+.........+++..+..++.||+.||.|||++||+|+||+|+|||++.++.++|+|||++....... ..
T Consensus 79 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~ 156 (258)
T cd05578 79 VDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--LT 156 (258)
T ss_pred EeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--cc
Confidence 9999987766666555689999999999999999999999999999999999999999999999999998664332 22
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTE--VEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~--~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
....|+..|+|||++.+ ..++.++|+|||||++|+|++|..||...+. .+.+...... .
T Consensus 157 ~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~--------------- 217 (258)
T cd05578 157 TSTSGTPGYMAPEVLCR-QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET---A--------------- 217 (258)
T ss_pred cccCCChhhcCHHHHcc-cCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---c---------------
Confidence 44568889999998866 4588999999999999999999999987764 2222222110 0
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCH--HHHHhCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTA--TAALRSEFF 404 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta--~elL~hp~f 404 (495)
.......++..+.++|.+||..||.+|+++ .|+++||||
T Consensus 218 ----------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 218 ----------DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ----------cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 011123466889999999999999999999 999999998
No 218
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=8.5e-42 Score=334.05 Aligned_cols=252 Identities=16% Similarity=0.221 Sum_probs=204.3
Q ss_pred CCCeeeeeeecccCceEEEEEEEC---CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDT---LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~---~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
..+|++.+.||+|+||.||+|.++ ..+..||+|+++... .......+.+|+.+++.++||||+++++++.. ...
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~ 80 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITR--GNT 80 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec--CCC
Confidence 357999999999999999999765 456789999987543 33445678899999999999999999999876 567
Q ss_pred eEEEEeeccCChhhhhhC-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 194 LYLVFKYMEHDLAGLAAS-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.|+||||++++.+..+.. ....+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||.+......
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~ 160 (266)
T cd05064 81 MMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE 160 (266)
T ss_pred cEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence 999999999876665543 3457899999999999999999999999999999999999999999999999987654322
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
.........++..|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+.+..+......
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~------------ 227 (266)
T cd05064 161 AIYTTMSGKSPVLWAAPEAIQY-HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL------------ 227 (266)
T ss_pred chhcccCCCCceeecCHHHHhh-CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC------------
Confidence 1111112234678999998876 578999999999999999775 99999988877766665322110
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....++..+.+++..||..||.+|||+.++++
T Consensus 228 ----------------~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 228 ----------------PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred ----------------CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 112346778899999999999999999999975
No 219
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2e-41 Score=335.58 Aligned_cols=259 Identities=27% Similarity=0.409 Sum_probs=207.5
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccC---Cc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRM---SC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~---~~ 192 (495)
.++|.+.+.||+|+||.||++.+..+++.||+|++.... .....+.+|+.+++.+ +||||+++++++.... ..
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 97 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGG 97 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCC
Confidence 578999999999999999999999999999999986532 2235567899999999 8999999999986532 24
Q ss_pred eeEEEEeeccCChhhhhh----CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccc
Q 011041 193 SLYLVFKYMEHDLAGLAA----SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASF 268 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~----~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~ 268 (495)
..|+||||+.++.+..+. .....+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++..
T Consensus 98 ~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~ 177 (291)
T cd06639 98 QLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQ 177 (291)
T ss_pred eeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchh
Confidence 689999999876554433 2345789999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCCCCccccccCCCCCcccccCCC----CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhh
Q 011041 269 FDPNHKQPMTSRVVTLWYRPPELLLGAT----DYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEY 344 (495)
Q Consensus 269 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~ 344 (495)
...... ......|+..|+|||++.... .++.++|||||||++|+|++|++||...+....+..+.+.. ...
T Consensus 178 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~---~~~- 252 (291)
T cd06639 178 LTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNP---PPT- 252 (291)
T ss_pred cccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCC---CCC-
Confidence 543221 123346889999999875422 36789999999999999999999998876655554442210 000
Q ss_pred hhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 345 WKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
+ .....++..+.+||.+||..||.+||++.++|+||||+
T Consensus 253 ---------------------~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 253 ---------------------L-LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred ---------------------C-CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 0 00123456789999999999999999999999999995
No 220
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=7.9e-42 Score=334.11 Aligned_cols=258 Identities=26% Similarity=0.424 Sum_probs=209.2
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccC----C
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRM----S 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~----~ 191 (495)
.++|++.+.||+|+||.||+|.+..+++.|++|++.... .....+.+|+.+++.+ +|+||+++++++.... .
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE---DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 478999999999999999999999999999999987543 2345688999999999 7999999999987532 4
Q ss_pred ceeEEEEeeccCChhhhhhC----CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeeccccc
Q 011041 192 CSLYLVFKYMEHDLAGLAAS----PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLAS 267 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~----~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~ 267 (495)
..+|+||||+.++.+..+.. ....+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~ 161 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSA 161 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccce
Confidence 56899999999865544432 24578999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCCCCccccccCCCCCcccccC----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChh
Q 011041 268 FFDPNHKQPMTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEE 343 (495)
Q Consensus 268 ~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~ 343 (495)
...... .......|++.|+|||++.. ...++.++|||||||+||+|++|.+||...+....+..+.... +. .
T Consensus 162 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~-~ 237 (275)
T cd06608 162 QLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNP--PP-T 237 (275)
T ss_pred ecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccC--CC-C
Confidence 654322 22344578999999998753 2346788999999999999999999998766555554443210 00 0
Q ss_pred hhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 344 YWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
+ .....++.++.+||.+||..||.+|||+.++++|||+
T Consensus 238 ----------------------~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 238 ----------------------L-KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred ----------------------C-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 0 0012356788999999999999999999999999996
No 221
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=4.7e-42 Score=339.31 Aligned_cols=261 Identities=21% Similarity=0.333 Sum_probs=207.4
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLD-HPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|+..+.||+|+||.||++++..+|+.||||.+...... .....+.+|+.++.++. |+||+++++++.. ....++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~--~~~~~~ 80 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFR--EGDCWI 80 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEec--CCcEEE
Confidence 5677888999999999999999999999999998765433 44567889999999996 9999999998876 457899
Q ss_pred EEeeccCChhhhh----hCCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 197 VFKYMEHDLAGLA----ASPTIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 197 v~e~~~~~l~~~~----~~~~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
+|||+...+..+. ......+++..+..++.|++.||+|||+ .||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 81 CMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred EEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 9999987654432 1234579999999999999999999997 5999999999999999999999999999976543
Q ss_pred CCCCCCccccccCCCCCcccccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 272 NHKQPMTSRVVTLWYRPPELLLGA--TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 272 ~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
.. ......|++.|+|||++.+. ..++.++|||||||++|+|++|++||..... ....+...........
T Consensus 161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~~----- 231 (288)
T cd06616 161 SI--AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDPPIL----- 231 (288)
T ss_pred CC--ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCCCcC-----
Confidence 22 12334688999999998764 3689999999999999999999999976542 2222222211110000
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.......++.++.+||.+||..||.+|||+.+++.||||..
T Consensus 232 ----------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 232 ----------------SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred ----------------CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 01111347788999999999999999999999999999975
No 222
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=5.9e-42 Score=337.07 Aligned_cols=255 Identities=27% Similarity=0.400 Sum_probs=204.6
Q ss_pred ecccCceEEEEEEECCCCeEEEeEEEecCCCC-hHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCC
Q 011041 126 IGQGTYSNVYKARDTLTGQIVALKKVRFDNLE-PESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHD 204 (495)
Q Consensus 126 LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~ 204 (495)
||+|+||+||+|.+..+|+.||+|++.+.... ......+.+|+.+|+.++||||+++++++.. ....|+||||++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~ 78 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET--KDDLCLVMTLMNGG 78 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec--CCeEEEEEecCCCC
Confidence 69999999999999999999999999764332 2234556789999999999999999999877 56799999999976
Q ss_pred hhhhhhCCC--CCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccccc
Q 011041 205 LAGLAASPT--IKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVV 282 (495)
Q Consensus 205 l~~~~~~~~--~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g 282 (495)
.+....... ..+++..+..++.||+.||.|||++||+||||+|+|||++.++.+||+|||++...... .......+
T Consensus 79 ~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~ 156 (277)
T cd05577 79 DLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--KKIKGRAG 156 (277)
T ss_pred cHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC--CccccccC
Confidence 555444332 36999999999999999999999999999999999999999999999999998765432 22334567
Q ss_pred cCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCccc
Q 011041 283 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSY 362 (495)
Q Consensus 283 t~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 362 (495)
+..|++||++.+ ..++.++|||||||++|+|++|+.||...........+.......
T Consensus 157 ~~~y~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------- 213 (277)
T cd05577 157 TPGYMAPEVLQG-EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEM---------------------- 213 (277)
T ss_pred CCCcCCHHHhcC-CCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccc----------------------
Confidence 889999999876 448899999999999999999999998765422222221110000
Q ss_pred ccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCCC
Q 011041 363 KRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPYA 410 (495)
Q Consensus 363 ~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~~ 410 (495)
.......+++.+.+||.+||+.||.+|| ++.+++.||||....|.
T Consensus 214 ---~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~ 263 (277)
T cd05577 214 ---AVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWR 263 (277)
T ss_pred ---cccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChh
Confidence 0112234688899999999999999999 99999999999876663
No 223
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.2e-41 Score=335.35 Aligned_cols=252 Identities=27% Similarity=0.389 Sum_probs=200.7
Q ss_pred eecccCceEEEEEEECCCCeEEEeEEEecCCCCh-HHHHHHHHHH---HHHHhCCCCCeeeeeceeeccCCceeEEEEee
Q 011041 125 KIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEP-ESVRFMAREI---LILRRLDHPNVVKLEGLVTSRMSCSLYLVFKY 200 (495)
Q Consensus 125 ~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~-~~~~~~~~Ei---~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~ 200 (495)
.||+|+||.||+|++..+++.||+|.+.+..... .....+..|. .+++..+||||+.+++++.. ...+|+||||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~v~e~ 78 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT--PDKLSFILDL 78 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec--CCEEEEEEec
Confidence 4899999999999999999999999998654321 1112233333 44555689999999999987 4679999999
Q ss_pred ccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccc
Q 011041 201 MEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSR 280 (495)
Q Consensus 201 ~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~ 280 (495)
+.++.+.........+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++..+.... ....
T Consensus 79 ~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---~~~~ 155 (278)
T cd05606 79 MNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHAS 155 (278)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---CcCc
Confidence 9987776666666689999999999999999999999999999999999999999999999999987654322 2345
Q ss_pred cccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHhcCCCChhhhhhCCCCCCccCC
Q 011041 281 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEV---EQLHKIFKLCGSPSEEYWKKSKLPHATIFK 357 (495)
Q Consensus 281 ~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~---~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 357 (495)
.|+..|+|||++.+...++.++|||||||++|+|++|..||.+.... .....+.. .
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~----~----------------- 214 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT----M----------------- 214 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc----c-----------------
Confidence 78999999999875456889999999999999999999999876322 21111110 0
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPYA 410 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~~ 410 (495)
.......+++++.+||.+||..||.+|+ ++.++++||||....|.
T Consensus 215 --------~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~ 264 (278)
T cd05606 215 --------AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQ 264 (278)
T ss_pred --------CCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCch
Confidence 0011234578899999999999999999 99999999999986553
No 224
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-43 Score=331.61 Aligned_cols=282 Identities=30% Similarity=0.540 Sum_probs=235.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC----Cc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM----SC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~ 192 (495)
..+|.-+..+|.|.- .|..|.|..+++.||+|++..........+...+|..++..+.|+||++++.+|.... -.
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 357889999999999 8889999999999999998766444555677889999999999999999999996532 24
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.+|+|||||...+..... ..++-..+..++.|++.|+.|||+.||+||||||+||++..++.+||.|||+|+..+..
T Consensus 95 e~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 95 EVYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred hHHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc
Confidence 589999999998877665 35677889999999999999999999999999999999999999999999999876544
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
-.++.++.|..|+|||++.+.+ |...+||||+|||+.||++|.-+|+|.+..+++.+|...+|+|++.+..+...-.
T Consensus 172 --~~mtpyVvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~ 248 (369)
T KOG0665|consen 172 --FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTV 248 (369)
T ss_pred --cccCchhheeeccCchheeccC-CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHH
Confidence 4567889999999999999855 9999999999999999999999999999999999999999999998877643322
Q ss_pred CccCCCCcccc-cccccccCC------------CCCCcHHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 353 ATIFKPQQSYK-RCIAETFKD------------FPPSSLPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 353 ~~~~~~~~~~~-~~~~~~~~~------------~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
.........+. ....+.+++ -+..+.+|+.+||..||++|.++.++|+||||+
T Consensus 249 r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 249 RNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 22222222211 112222222 124578999999999999999999999999998
No 225
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2.8e-41 Score=333.28 Aligned_cols=261 Identities=27% Similarity=0.422 Sum_probs=207.0
Q ss_pred CCCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeec---c
Q 011041 114 PRRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTS---R 189 (495)
Q Consensus 114 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~---~ 189 (495)
....++|++++.||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.+ +|+||+++++++.. .
T Consensus 14 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 14 PDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred CCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 344689999999999999999999999999999999876432 2234577899999999 79999999998743 2
Q ss_pred CCceeEEEEeeccCChhhhhh----CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeeccc
Q 011041 190 MSCSLYLVFKYMEHDLAGLAA----SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGL 265 (495)
Q Consensus 190 ~~~~~~lv~e~~~~~l~~~~~----~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~ 265 (495)
.+...|+||||++++.+..+. .....+++..+..++.||+.||.|||+++|+||||||+||+++.++.+||+|||+
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~ 170 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGV 170 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCc
Confidence 246799999999876554432 2345689999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCccccccCCCCCcccccC----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC
Q 011041 266 ASFFDPNHKQPMTSRVVTLWYRPPELLLG----ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPS 341 (495)
Q Consensus 266 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~ 341 (495)
+....... .......|++.|+|||++.. ...++.++|||||||++|+|++|.+||...+....+.++.... +.
T Consensus 171 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~--~~ 247 (286)
T cd06638 171 SAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNP--PP 247 (286)
T ss_pred eeecccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccC--CC
Confidence 87664322 22234578999999998753 2347889999999999999999999998766544433321100 00
Q ss_pred hhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 342 EEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.......++..+.+||.+||+.||.+|||+.++|+|+||
T Consensus 248 ------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 248 ------------------------TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred ------------------------cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 000012245678999999999999999999999999997
No 226
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=4.5e-41 Score=337.18 Aligned_cols=256 Identities=28% Similarity=0.456 Sum_probs=214.1
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
+.|...+.||+|+||.||+|++..+|..|++|++..... .......+.+|+.+++.++||||+++++++.+ ....|+
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~l 98 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK--EHTAWL 98 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe--CCEEEE
Confidence 457778899999999999999999999999999976543 34445678889999999999999999999987 567999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+.+++...+......+++..+..++.||+.+|.|||++||+|+||||+||+++.++.+||+|||++.... .
T Consensus 99 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~-----~ 173 (313)
T cd06633 99 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS-----P 173 (313)
T ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC-----C
Confidence 99999988887776666679999999999999999999999999999999999999999999999999986432 2
Q ss_pred CccccccCCCCCcccccC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 277 MTSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~--~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
.....|+..|+|||++.. ...++.++|||||||++|+|++|.+||...+.......+.... .+
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~--~~------------- 238 (313)
T cd06633 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND--SP------------- 238 (313)
T ss_pred CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC--CC-------------
Confidence 234578899999998742 3457889999999999999999999998877666665553210 00
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
......++..+.+||.+||+.||.+||++.++|+||||...
T Consensus 239 ------------~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 239 ------------TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred ------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 00112355678999999999999999999999999999863
No 227
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-43 Score=355.94 Aligned_cols=253 Identities=27% Similarity=0.466 Sum_probs=206.1
Q ss_pred eecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCC
Q 011041 125 KIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHD 204 (495)
Q Consensus 125 ~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~ 204 (495)
+||+|.||+||-|+|+.|....|||.|.-. .....+-+..||.+.++|+|.|||+++|.+.. ++++-|.||-++|+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek--dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se--nGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK--DSREVQPLHEEIALHSTLRHKNIVRYLGSVSE--NGFFKIFMEQVPGG 657 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc--cchhhccHHHHHHHHHHHhhHhHHHHhhccCC--CCeEEEEeecCCCC
Confidence 599999999999999999999999998643 34455678899999999999999999999876 67889999999987
Q ss_pred hhhhh-hCCCCCC--CHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC-CCcEEEeecccccccCCCCCCCCccc
Q 011041 205 LAGLA-ASPTIKF--TQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN-EGILTIADFGLASFFDPNHKQPMTSR 280 (495)
Q Consensus 205 l~~~~-~~~~~~l--~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~-~~~vkL~DFG~a~~~~~~~~~~~~~~ 280 (495)
.+..+ ...-+++ .|..+..|.+||++||.|||++.|||||||-+|+||+. .|.+||.|||.++....- +....++
T Consensus 658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi-nP~TETF 736 (1226)
T KOG4279|consen 658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI-NPCTETF 736 (1226)
T ss_pred cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccC-Ccccccc
Confidence 66554 4455566 88999999999999999999999999999999999976 799999999999876432 2334567
Q ss_pred cccCCCCCccccc-CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCC
Q 011041 281 VVTLWYRPPELLL-GATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQ 359 (495)
Q Consensus 281 ~gt~~y~aPE~l~-~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 359 (495)
.||..|||||++. |...|+.++|||||||++.||.||+|||.... .|..-+|... .|+..
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elg-------------spqAAMFkVG------myKvH 797 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELG-------------SPQAAMFKVG------MYKVH 797 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecC-------------ChhHhhhhhc------ceecC
Confidence 8999999999984 44679999999999999999999999997532 2222222111 11111
Q ss_pred cccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCC
Q 011041 360 QSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKP 408 (495)
Q Consensus 360 ~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~ 408 (495)
..+...++.++++||.+|+..||.+||+|.++|+.||++..+
T Consensus 798 -------P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~ 839 (1226)
T KOG4279|consen 798 -------PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNN 839 (1226)
T ss_pred -------CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCC
Confidence 122334667889999999999999999999999999998753
No 228
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.3e-41 Score=329.67 Aligned_cols=253 Identities=28% Similarity=0.478 Sum_probs=209.1
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|++.+.||+|+||.||+|++..++..|++|.+.... ....+.+|+.+++.++|+||+++++++.. ....|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFK--NTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeec--CCcEEEE
Confidence 67999999999999999999999989999999986432 25678899999999999999999999987 4679999
Q ss_pred EeeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 198 FKYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 198 ~e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
+||+.++.+..+. .....+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++........ .
T Consensus 77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-~ 155 (256)
T cd06612 77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-K 155 (256)
T ss_pred EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc-c
Confidence 9999986665544 3455789999999999999999999999999999999999999999999999999987654321 2
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
.....++..|+|||++.+ ..++.++||||||||+|+|++|.+||...+.......+... ...
T Consensus 156 ~~~~~~~~~y~~PE~~~~-~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~-------------- 217 (256)
T cd06612 156 RNTVIGTPFWMAPEVIQE-IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK---PPP-------------- 217 (256)
T ss_pred cccccCCccccCHHHHhc-CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC---CCC--------------
Confidence 234457889999998876 46889999999999999999999999876654433322110 000
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.......++..+.+||.+||..||.+|||+.++|.||||
T Consensus 218 ---------~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 218 ---------TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred ---------CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 001112356778999999999999999999999999997
No 229
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.9e-41 Score=328.64 Aligned_cols=254 Identities=25% Similarity=0.494 Sum_probs=209.5
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|.+.+.||+|+||.||++.++.+|..||+|.+............+.+|+.+++.++|+||+++++.+.. ....|+|+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE--NGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc--CCeEEEEE
Confidence 4889999999999999999999999999999998765444455678899999999999999999999877 56899999
Q ss_pred eeccCChhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC-cEEEeecccccccCCCCCC
Q 011041 199 KYMEHDLAGLAAS--PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG-ILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 199 e~~~~~l~~~~~~--~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~-~vkL~DFG~a~~~~~~~~~ 275 (495)
||+.+..+..... ....+++..+..++.||+.||.|||+++|+|+||||+||++++++ .+||+|||.+....... .
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-~ 157 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM-E 157 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc-c
Confidence 9998755544432 233589999999999999999999999999999999999999886 46999999998765332 2
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
......|++.|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+....
T Consensus 158 ~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------------ 218 (257)
T cd08225 158 LAYTCVGTPYYLSPEICQN-RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY------------------ 218 (257)
T ss_pred cccccCCCccccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc------------------
Confidence 2233468999999998765 457899999999999999999999998776655554433210
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.......++.++.++|.+||..||++|||+.++++||||
T Consensus 219 ----------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 219 ----------FAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred ----------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 111123467789999999999999999999999999997
No 230
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.2e-41 Score=335.32 Aligned_cols=253 Identities=23% Similarity=0.340 Sum_probs=205.8
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCC-----eEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTG-----QIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g-----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
.++|++++.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.++..++||||+++++++.+ .
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~--~ 80 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK--E 80 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcC--C
Confidence 357999999999999999999876555 789999986443 34455678899999999999999999999876 4
Q ss_pred ceeEEEEeeccCChhhhhhCCC----------------CCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC
Q 011041 192 CSLYLVFKYMEHDLAGLAASPT----------------IKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE 255 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~~----------------~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~ 255 (495)
...|++|||+.++.+..++... ..+++..+..++.||+.||.|||++||+||||||+|||++++
T Consensus 81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG 160 (283)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC
Confidence 6789999999876554433211 458899999999999999999999999999999999999999
Q ss_pred CcEEEeecccccccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 011041 256 GILTIADFGLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKI 333 (495)
Q Consensus 256 ~~vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i 333 (495)
+.+||+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+....+
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY-GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMI 239 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhcc-CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999999976532221 12234466889999998875 468999999999999999998 99999988877766655
Q ss_pred HHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 334 FKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 334 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
.... .......+|+++.+|+..||+.||.+|||+.+++++
T Consensus 240 ~~~~----------------------------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 240 RSRQ----------------------------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HcCC----------------------------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 3311 011123578889999999999999999999999874
No 231
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.7e-41 Score=333.70 Aligned_cols=256 Identities=27% Similarity=0.463 Sum_probs=212.2
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
..|+.++.||.|+||.||+|.+..++..||||++..... ......+.+|+.+++.++|+||+++++++.+ +...|+|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--GTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--CCEEEEE
Confidence 468888999999999999999999999999999875432 3445778899999999999999999999987 5689999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
|||++++.+..+... ..+++.++..++.||+.||.|||+++++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 81 ~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~ 158 (277)
T cd06640 81 MEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKR 158 (277)
T ss_pred EecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc-ccc
Confidence 999998766655543 468999999999999999999999999999999999999999999999999997664332 222
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFK 357 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 357 (495)
....++..|+|||++.+ ..++.++|+|||||++|+|++|.+||.+.+.......+... .+
T Consensus 159 ~~~~~~~~y~apE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~--~~----------------- 218 (277)
T cd06640 159 NTFVGTPFWMAPEVIQQ-SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN--NP----------------- 218 (277)
T ss_pred ccccCcccccCHhHhcc-CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcC--CC-----------------
Confidence 34467889999998875 45789999999999999999999999877655444332110 00
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
......++..+.+||.+||..||.+||++.++++|+||...
T Consensus 219 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 219 ---------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred ---------CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 01122456778899999999999999999999999999764
No 232
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.3e-41 Score=333.64 Aligned_cols=255 Identities=32% Similarity=0.504 Sum_probs=213.2
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCCceeE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLD-HPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~~~ 195 (495)
++|.+.+.||+|+||.||+|++..+|+.||+|++.+... .......+.+|+.+++.+. |+||+++++++.+ ...+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~--~~~~~ 78 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD--EENLY 78 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcC--CceEE
Confidence 479999999999999999999999999999999876433 3344567889999999998 9999999999877 56799
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC-
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK- 274 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~- 274 (495)
+||||+.++.+.........+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++........
T Consensus 79 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 79 FVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 9999997655555555555799999999999999999999999999999999999999999999999999986643321
Q ss_pred ------------------CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh
Q 011041 275 ------------------QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKL 336 (495)
Q Consensus 275 ------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~ 336 (495)
.......++..|++||++.+ ..++.++|||||||++++|++|..||...+....+..+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 237 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL 237 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCC-CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc
Confidence 12233467899999998765 45788999999999999999999999988766665555421
Q ss_pred cCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCH----HHHHhCCCC
Q 011041 337 CGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTA----TAALRSEFF 404 (495)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta----~elL~hp~f 404 (495)
.. .....+++.+.+||.+||+.||.+|||+ .++|+||||
T Consensus 238 ~~-----------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 238 EY-----------------------------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred CC-----------------------------CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 11 1123457788999999999999999999 999999998
No 233
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=6.2e-42 Score=333.76 Aligned_cols=254 Identities=26% Similarity=0.412 Sum_probs=207.6
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|++.+.||.|+||.||+|.++.+++.||+|.+..... ......+.+|+.+++.++||||+++++++.. ....|++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv 77 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYN--NGDISIC 77 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeec--CCEEEEE
Confidence 468889999999999999999999999999999876543 3455678899999999999999999999887 4789999
Q ss_pred EeeccCChhhhhhC-CCCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 198 FKYMEHDLAGLAAS-PTIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 198 ~e~~~~~l~~~~~~-~~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+||+.+..+..+.. ....+++..+..++.||+.+|.|||+ .|++|+||||+||+++.++.++|+|||++........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 156 (265)
T cd06605 78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA- 156 (265)
T ss_pred EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-
Confidence 99999654444443 33689999999999999999999999 9999999999999999999999999999876543221
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRT-----EVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~-----~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
....++..|+|||.+.+ ..++.++|||||||++|+|++|..||...+ ..+.+..+.. ....
T Consensus 157 --~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~-------- 222 (265)
T cd06605 157 --KTFVGTSSYMAPERIQG-NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN---EPPP-------- 222 (265)
T ss_pred --hcccCChhccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc---CCCC--------
Confidence 12578889999998876 478999999999999999999999997642 2222222211 0000
Q ss_pred CCCccCCCCcccccccccccC-CCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 351 PHATIFKPQQSYKRCIAETFK-DFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.... .+++++.+||..||..||.+|||+.+++.||||+.
T Consensus 223 -----------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 223 -----------------RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred -----------------CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 0011 16778999999999999999999999999999975
No 234
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.4e-41 Score=333.84 Aligned_cols=257 Identities=25% Similarity=0.473 Sum_probs=210.6
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC---CCCeeeeeceeeccCCceeE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLD---HPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~~~~~~~ 195 (495)
.|++++.||+|+||.||+|.+..++..||+|.+.... .......+.+|+.+++.+. ||||+++++++.. ....|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~--~~~~~ 78 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK--GPRLW 78 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee--CCEEE
Confidence 5888899999999999999999999999999987543 3344567889999999996 9999999999876 56799
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+||||+.++.+..+.... .+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .
T Consensus 79 lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~ 156 (277)
T cd06917 79 IIMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS-S 156 (277)
T ss_pred EEEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-c
Confidence 999999887665555443 78999999999999999999999999999999999999999999999999998765443 2
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
......|+..|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+.......+... .++
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~--~~~-------------- 220 (277)
T cd06917 157 KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS--KPP-------------- 220 (277)
T ss_pred ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC--CCC--------------
Confidence 2344578999999998876556789999999999999999999999876544332221110 000
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
. +. ...++.++.+||.+||..||.+|||+.+++.|+||+..
T Consensus 221 -----~----~~--~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~ 261 (277)
T cd06917 221 -----R----LE--DNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAH 261 (277)
T ss_pred -----C----CC--cccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcc
Confidence 0 00 01267789999999999999999999999999999764
No 235
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-42 Score=354.77 Aligned_cols=250 Identities=26% Similarity=0.397 Sum_probs=210.0
Q ss_pred CCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCce
Q 011041 115 RRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 115 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~ 193 (495)
...+.|.+...+|.|+|+.|-.|.+..+++.+++|++.+.. ....+|+.++... +||||+++++.+.+ ...
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~------~~~~~e~~~~~~~~~h~niv~~~~v~~~--~~~ 390 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA------DDNQDEIPISLLVRDHPNIVKSHDVYED--GKE 390 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheeccccc------cccccccchhhhhcCCCcceeecceecC--Cce
Confidence 35688999999999999999999999999999999998652 2234577666655 79999999999988 678
Q ss_pred eEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeee-CCCCcEEEeecccccccCCC
Q 011041 194 LYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLI-DNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl-~~~~~vkL~DFG~a~~~~~~ 272 (495)
+|+|||++.++.+...+.....+. .++..|+++|+.++.|||++|||||||||+|||+ +..|+++|+|||.++.....
T Consensus 391 ~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 391 IYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred eeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 999999999987776665554555 8888999999999999999999999999999999 58999999999999866433
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhcCCCChhhhhhCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEV-EQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
..+.+-|..|.|||++.. ..|+.++||||||++||+||+|+.||...... +++.+| +.+...
T Consensus 470 ----~~tp~~t~~y~APEvl~~-~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i----~~~~~s-------- 532 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAI-QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI----QMPKFS-------- 532 (612)
T ss_pred ----hcccchhhcccChhhhcc-CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh----cCCccc--------
Confidence 344567899999999874 78999999999999999999999999876655 443333 222111
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPY 409 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~ 409 (495)
..+|+++++||..||+.||.+|+++.+++.||||.+++.
T Consensus 533 -------------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~~t 571 (612)
T KOG0603|consen 533 -------------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSHPT 571 (612)
T ss_pred -------------------cccCHHHHHHHHHhccCChhhCcChhhhccCcchhcCCC
Confidence 357899999999999999999999999999999966554
No 236
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.3e-41 Score=336.34 Aligned_cols=259 Identities=20% Similarity=0.255 Sum_probs=199.9
Q ss_pred CCCeeeeeeecccCceEEEEEEECC----------------CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCee
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTL----------------TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVV 180 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~----------------~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv 180 (495)
.++|.+.+.||+|+||.||+|++.. ++..||+|++.... .......+.+|+.+|..++||||+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCee
Confidence 4689999999999999999997532 34579999987543 344556788999999999999999
Q ss_pred eeeceeeccCCceeEEEEeeccCChhhhhhCC-------------------CCCCCHHHHHHHHHHHHHHHHHhhhCCce
Q 011041 181 KLEGLVTSRMSCSLYLVFKYMEHDLAGLAASP-------------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVL 241 (495)
Q Consensus 181 ~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~-------------------~~~l~e~~~~~i~~qil~~L~~LH~~giv 241 (495)
++++++.+ ....|+||||+.++.+..+... ...+++..+..++.||+.||.|||++||+
T Consensus 83 ~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 83 RLLGVCVD--EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred EEEEEEec--CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 99999987 4568999999987554433221 12467888999999999999999999999
Q ss_pred eccCCCCCeeeCCCCcEEEeecccccccCCCCCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh--CC
Q 011041 242 HRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA--EK 318 (495)
Q Consensus 242 HrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt--G~ 318 (495)
||||||+||||+.++.+||+|||++......... ......++..|+|||++.+ ..++.++|||||||++|+|++ +.
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHHccCC
Confidence 9999999999999999999999999765432211 1123345788999998875 568999999999999999986 66
Q ss_pred CCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHH
Q 011041 319 PIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAA 398 (495)
Q Consensus 319 ~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~el 398 (495)
.||.+.+..+.+..+........... .......+|..+.+||.+||..||.+|||+.++
T Consensus 240 ~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i 298 (304)
T cd05096 240 QPYGELTDEQVIENAGEFFRDQGRQV---------------------YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDI 298 (304)
T ss_pred CCCCcCCHHHHHHHHHHHhhhccccc---------------------cccCCCCCCHHHHHHHHHHccCCchhCcCHHHH
Confidence 78887776666555433211100000 001123467789999999999999999999999
Q ss_pred Hh
Q 011041 399 LR 400 (495)
Q Consensus 399 L~ 400 (495)
.+
T Consensus 299 ~~ 300 (304)
T cd05096 299 HA 300 (304)
T ss_pred HH
Confidence 64
No 237
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-41 Score=335.80 Aligned_cols=260 Identities=23% Similarity=0.334 Sum_probs=210.6
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|++++.||+|+||+||++.+..+|..||+|++.... .......+.+|+.+++.++||||+++++++.. ...+|+
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~l 80 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLN--ENNICM 80 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEec--CCEEEE
Confidence 478999999999999999999999999999999987543 23445678899999999999999999999987 468999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
||||+.++.+..+......+++..+..++.||+.+|.|||+ +||+||||||+||+++.++.++|+|||++.......
T Consensus 81 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~-- 158 (284)
T cd06620 81 CMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI-- 158 (284)
T ss_pred EEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc--
Confidence 99999988777666656679999999999999999999996 699999999999999999999999999986543221
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHHHhcCCCChhhhhh
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVE--------QLHKIFKLCGSPSEEYWKK 347 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~--------~~~~i~~~~g~~~~~~~~~ 347 (495)
....+|+..|+|||++.+ ..++.++|||||||++|+|++|..||......+ ....+.........
T Consensus 159 -~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 231 (284)
T cd06620 159 -ADTFVGTSTYMSPERIQG-GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP----- 231 (284)
T ss_pred -cCccccCcccCCHHHHcc-CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCC-----
Confidence 124578999999998876 468899999999999999999999998655421 11111000000000
Q ss_pred CCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 348 SKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
......++.++.+||.+||..||.+|||+.|+++|+||...
T Consensus 232 -------------------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 232 -------------------RLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred -------------------CCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 00001266778999999999999999999999999999763
No 238
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2e-41 Score=329.67 Aligned_cols=253 Identities=28% Similarity=0.390 Sum_probs=204.0
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCCC-hHHHHHHHHHHHHH-HhCCCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLE-PESVRFMAREILIL-RRLDHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~il-~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
+.||+|+||.||+|.+..+|+.||+|++.+.... ......+..|..++ ..++|+||+++++++.. ...+|+||||+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~ 79 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS--KDYLYLVMEYL 79 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc--CCeEEEEEecc
Confidence 5699999999999999999999999998765432 22233344555544 44589999999999987 56899999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRV 281 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 281 (495)
.++.+..+......+++..+..++.||+.||.|||+.||+||||+|+|||++.++.+||+|||++..... .....
T Consensus 80 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~~~~ 154 (260)
T cd05611 80 NGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKKFV 154 (260)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc-----cccCC
Confidence 9877666665556799999999999999999999999999999999999999999999999999875432 13346
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQS 361 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (495)
+++.|++||.+.+. .++.++|||||||++|+|++|.+||...+.......+........
T Consensus 155 ~~~~y~~pe~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------- 213 (260)
T cd05611 155 GTPDYLAPETILGV-GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWP-------------------- 213 (260)
T ss_pred CCcCccChhhhcCC-CCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCC--------------------
Confidence 78899999998764 478999999999999999999999998877666655533111100
Q ss_pred cccccccccCCCCCCcHHHHHHhccCCCCCccC---HHHHHhCCCCCCCCC
Q 011041 362 YKRCIAETFKDFPPSSLPLIETLLAIDPAERQT---ATAALRSEFFTTKPY 409 (495)
Q Consensus 362 ~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t---a~elL~hp~f~~~~~ 409 (495)
......+++++.++|.+||+.||.+||| ++|+|.||||....|
T Consensus 214 -----~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~ 259 (260)
T cd05611 214 -----EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINW 259 (260)
T ss_pred -----CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence 0112346888999999999999999995 579999999987544
No 239
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=5.4e-41 Score=327.69 Aligned_cols=258 Identities=26% Similarity=0.433 Sum_probs=210.6
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCC---CChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCcee
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDN---LEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~---~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 194 (495)
.+|++.+.||+|+||.||+|++..++..||+|.+.... ........+.+|+.+++.++|+||+++++++.+.....+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47999999999999999999999999999999986432 133455688899999999999999999999877555678
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC-
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH- 273 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~- 273 (495)
+++|||+.++.+.........+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 161 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM 161 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence 9999999876665555444568999999999999999999999999999999999999999999999999997653211
Q ss_pred -CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 274 -KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 274 -~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
........++..|+|||++.+ ..++.++|||||||++|+|++|.+||...+..+...++.. .+..
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~---------- 227 (264)
T cd06653 162 SGTGIKSVTGTPYWMSPEVISG-EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT---QPTK---------- 227 (264)
T ss_pred cCccccccCCcccccCHhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc---CCCC----------
Confidence 111234568999999998876 4578999999999999999999999987765555444321 1110
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
......+++.+.++|.+||. +|.+|||+.++|.|||.
T Consensus 228 --------------~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 228 --------------PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred --------------CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 01123467789999999999 57999999999999984
No 240
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.4e-41 Score=332.03 Aligned_cols=262 Identities=26% Similarity=0.379 Sum_probs=207.1
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|+..+.||.|++|.||+|.+..+++.||+|.+..... ......+.+|+++++.++||||+++++++.......+|+|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 468999999999999999999999999999999875432 2445678899999999999999999999876556679999
Q ss_pred EeeccCChhhhh----hCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 011041 198 FKYMEHDLAGLA----ASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH 273 (495)
Q Consensus 198 ~e~~~~~l~~~~----~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~ 273 (495)
|||++++.+..+ ......+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL 159 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc
Confidence 999987544332 2334568999999999999999999999999999999999999999999999999987553222
Q ss_pred CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHhcCCCChhhhhhC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTE-----VEQLHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~-----~~~~~~i~~~~g~~~~~~~~~~ 348 (495)
.....++..|++||.+.+ ..++.++|||||||++|+|++|..||..... .+....+... ... ....
T Consensus 160 ---~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~- 230 (287)
T cd06621 160 ---AGTFTGTSFYMAPERIQG-KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM---PNP-ELKD- 230 (287)
T ss_pred ---cccccCCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC---Cch-hhcc-
Confidence 123457889999998865 5688999999999999999999999986522 2222222110 000 0000
Q ss_pred CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 349 KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.......+++.+.+||.+||..||.+|||+.|+++||||+.
T Consensus 231 -----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 271 (287)
T cd06621 231 -----------------EPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA 271 (287)
T ss_pred -----------------CCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccc
Confidence 00000124567889999999999999999999999999965
No 241
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.7e-41 Score=337.70 Aligned_cols=259 Identities=25% Similarity=0.425 Sum_probs=212.7
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
..|.....||+|+||.||+|.+..+++.||+|++..... .....+.+|+.+++.++||||+++++++.. ....|++
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~iv 96 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLV--GEELWVL 96 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheee--CCeEEEE
Confidence 456666789999999999999999999999999875432 234567899999999999999999999877 5679999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
|||+.++.+..+... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+.... ...
T Consensus 97 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~ 174 (297)
T cd06659 97 MEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKR 174 (297)
T ss_pred EecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc-ccc
Confidence 999998766655443 468999999999999999999999999999999999999999999999999987654322 222
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFK 357 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 357 (495)
....|++.|+|||++.+ ..++.++|||||||++|+|++|++||...+..+.+..+... +. .
T Consensus 175 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~-~-------------- 235 (297)
T cd06659 175 KSLVGTPYWMAPEVISR-TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS---PP-P-------------- 235 (297)
T ss_pred cceecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc---CC-C--------------
Confidence 34578999999998876 46899999999999999999999999887776665544221 00 0
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPY 409 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~ 409 (495)
.......++..+.++|.+||+.||.+||++.++++||||.....
T Consensus 236 --------~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 236 --------KLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred --------CccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 00112346678899999999999999999999999999987543
No 242
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5e-42 Score=345.95 Aligned_cols=247 Identities=23% Similarity=0.410 Sum_probs=205.7
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
+.+.+++.||+|.||.||+|....+ ..||+|.+....... +.|.+|+++|++|+|+|||++++++... ..+|||
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~---~~f~~Ea~iMk~L~H~~lV~l~gV~~~~--~piyIV 279 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSP---EAFLREAQIMKKLRHEKLVKLYGVCTKQ--EPIYIV 279 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccCh---hHHHHHHHHHHhCcccCeEEEEEEEecC--CceEEE
Confidence 5667789999999999999987643 379999998654433 4566999999999999999999999873 469999
Q ss_pred EeeccCC-hhhhhhC-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 198 FKYMEHD-LAGLAAS-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 198 ~e~~~~~-l~~~~~~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
||||..+ |+..+.. .+..+...+...++.||++|++||+++++|||||-..||||++++.+||+|||+|+....+...
T Consensus 280 tE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~ 359 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT 359 (468)
T ss_pred EEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCcee
Confidence 9999976 4444443 4668999999999999999999999999999999999999999999999999999965443332
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
.....--..-|.|||.+.. ..++.++|||||||+|+||+| |+.|+.+.+..+.+..+.+..--|
T Consensus 360 ~~~~~kfPIkWtAPEa~~~-~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp-------------- 424 (468)
T KOG0197|consen 360 ASEGGKFPIKWTAPEALNY-GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLP-------------- 424 (468)
T ss_pred ecCCCCCCceecCHHHHhh-CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCC--------------
Confidence 2222222556999999875 568999999999999999998 999999999999999986643222
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHH
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAAL 399 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL 399 (495)
....+|+++.+|+..|+..+|++|||.+.+.
T Consensus 425 --------------~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 425 --------------RPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred --------------CCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 2346889999999999999999999998765
No 243
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-43 Score=326.78 Aligned_cols=289 Identities=34% Similarity=0.540 Sum_probs=234.6
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC---ce
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS---CS 193 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~---~~ 193 (495)
-.+.+--+.||.|+||+||.++|..+|+.||+|++..-...-...+.+-+|+++|.-++|.|++..+++.....- ..
T Consensus 52 q~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqE 131 (449)
T KOG0664|consen 52 QQDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQE 131 (449)
T ss_pred cccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHH
Confidence 344555678999999999999999999999999986443344456678899999999999999988776654221 23
Q ss_pred eEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 011041 194 LYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH 273 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~ 273 (495)
+|+++|+|..+|...+.... .++..+++-+++||++||+|||+.||+||||||.|+|++.+..+||||||+++..+...
T Consensus 132 iYV~TELmQSDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 132 LYVLTELMQSDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHHHHHHhhhhheeccCC-CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhh
Confidence 78899999998887766654 79999999999999999999999999999999999999999999999999999988877
Q ss_pred CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC-CC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL-PH 352 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~-~~ 352 (495)
...++..+.|.+|+|||+++|...|+.++||||.|||+.||+..+-+|...++.+++..|..++|+|..+.+....- ..
T Consensus 211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk 290 (449)
T KOG0664|consen 211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAK 290 (449)
T ss_pred hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhH
Confidence 77888889999999999999999999999999999999999999999999999999999999999999876543210 00
Q ss_pred CccC--CCCccccccccc--ccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 353 ATIF--KPQQSYKRCIAE--TFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 353 ~~~~--~~~~~~~~~~~~--~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.-.. ....+....+-. ...+-..+..+++..||..||.+|.+..+++.|+|+..
T Consensus 291 ~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 291 NHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE 348 (449)
T ss_pred HHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence 0000 000000000000 00122346788999999999999999999999999864
No 244
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=4.2e-41 Score=368.95 Aligned_cols=149 Identities=26% Similarity=0.394 Sum_probs=133.2
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
.++|.+++.||+|+||.||+|++..+++.||||++..... .......+.+|+.++..++|+||+++++++.. ...+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--~~~~~ 80 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS--ANNVY 80 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE--CCEEE
Confidence 5789999999999999999999999999999999986543 44556778899999999999999999988876 56899
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeeccccc
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLAS 267 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~ 267 (495)
|||||+.++.+..++.....+++..++.|+.||+.||.|||.+|||||||||+||||+.++.+||+|||++.
T Consensus 81 lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 81 LVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999876665555555578999999999999999999999999999999999999999999999999985
No 245
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.9e-41 Score=326.80 Aligned_cols=256 Identities=31% Similarity=0.464 Sum_probs=213.3
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|++.+.||+|++|.||+|++..+++.|++|++...... .....+.+|+.++..++|+||+++++++.. ...+|+|
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv 77 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYK--EGEISIV 77 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcc--CCeEEEE
Confidence 4689999999999999999999999999999998765432 456778899999999999999999999887 5789999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
|||+.++.+..+......+++..+..++.||+.||.|||+ .|++|+||+|+||+++.++.++|+|||++........ .
T Consensus 78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~-~ 156 (264)
T cd06623 78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD-Q 156 (264)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC-c
Confidence 9999977666665555679999999999999999999999 9999999999999999999999999999987653322 2
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRT---EVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~---~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
.....++..|+|||.+.+ ..++.++|||||||++|+|++|.+||...+ ..+....+.. ..
T Consensus 157 ~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---~~------------- 219 (264)
T cd06623 157 CNTFVGTVTYMSPERIQG-ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD---GP------------- 219 (264)
T ss_pred ccceeecccccCHhhhCC-CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc---CC-------------
Confidence 234568899999998865 468899999999999999999999998764 2233333221 00
Q ss_pred ccCCCCcccccccccccCC-CCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 354 TIFKPQQSYKRCIAETFKD-FPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~-~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
....... ++..+.++|..||..+|.+|||+.++|+||||+.
T Consensus 220 ------------~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~ 261 (264)
T cd06623 220 ------------PPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261 (264)
T ss_pred ------------CCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence 0011123 6788999999999999999999999999999975
No 246
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-42 Score=351.94 Aligned_cols=263 Identities=28% Similarity=0.382 Sum_probs=217.1
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.-|..++.||-|+||.|.+++..+|...||+|.+++... ....+..+..|-.||..-+.+-||+||..|.+ ...+|+
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQD--kdnLYF 706 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQD--KDNLYF 706 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEecc--CCceEE
Confidence 568889999999999999999999999999999987654 66777888899999999999999999988887 567999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC--
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK-- 274 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~-- 274 (495)
||+|+.|+.+-.++-+.+.|.|..++.|+.++..|+++.|.+|+|||||||+|||||.+|+|||+||||++-+....+
T Consensus 707 VMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdsk 786 (1034)
T KOG0608|consen 707 VMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 786 (1034)
T ss_pred EEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccc
Confidence 999999765444444455799999999999999999999999999999999999999999999999999965421110
Q ss_pred ---------------------------------------CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHH
Q 011041 275 ---------------------------------------QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL 315 (495)
Q Consensus 275 ---------------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ell 315 (495)
......+||+.|+|||+|.. ..|+.-+|+||.|||||||+
T Consensus 787 YYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r-~g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 787 YYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred cccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc-cCccccchhhHhhHHHHHHh
Confidence 01134689999999999986 57899999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC-
Q 011041 316 AEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT- 394 (495)
Q Consensus 316 tG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t- 394 (495)
.|.+||...+..+.-.+|.+ |...- .......+++++.+||.++. .++++|+.
T Consensus 866 ~g~~pf~~~tp~~tq~kv~n---------w~~~l----------------~~~~~~~ls~e~~~li~kLc-~sad~RLGk 919 (1034)
T KOG0608|consen 866 VGQPPFLADTPGETQYKVIN---------WRNFL----------------HIPYQGNLSKEALDLIQKLC-CSADSRLGK 919 (1034)
T ss_pred hCCCCccCCCCCcceeeeee---------hhhcc----------------ccccccccCHHHHHHHHHHh-cChhhhhcc
Confidence 99999999888776665543 22200 00112457899999999965 58888865
Q ss_pred --HHHHHhCCCCCCCCC
Q 011041 395 --ATAALRSEFFTTKPY 409 (495)
Q Consensus 395 --a~elL~hp~f~~~~~ 409 (495)
++|+-.||||+...|
T Consensus 920 ng~d~vKaHpfFkgIDf 936 (1034)
T KOG0608|consen 920 NGADQVKAHPFFKGIDF 936 (1034)
T ss_pred cchhhhhcCccccccch
Confidence 788999999997655
No 247
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=7e-41 Score=336.29 Aligned_cols=255 Identities=28% Similarity=0.463 Sum_probs=213.4
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
..|...+.||+|+||.||++++..++..||+|++..... ..+....+.+|+.+++.++|+||+++++++.+ +...|+
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~l 102 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR--EHTAWL 102 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee--CCeEEE
Confidence 448889999999999999999999999999999976543 33455678899999999999999999999887 567899
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||||+.+++..........+++.++..++.||+.||.|||++||+||||+|+||+++.++.+||+|||++.....
T Consensus 103 v~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~----- 177 (317)
T cd06635 103 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP----- 177 (317)
T ss_pred EEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC-----
Confidence 999999988777665566799999999999999999999999999999999999999999999999999875432
Q ss_pred CccccccCCCCCcccccC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 277 MTSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~--~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
.....|++.|+|||++.. ...++.++|||||||++|+|++|.+||...+.......+.......
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 243 (317)
T cd06635 178 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT-------------- 243 (317)
T ss_pred cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCC--------------
Confidence 234468899999998742 2457889999999999999999999998877666655554321100
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.....+++.+.+||.+||+.||.+|||+.++++|+|+..
T Consensus 244 -------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 244 -------------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred -------------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 001235567899999999999999999999999999865
No 248
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=9.4e-42 Score=335.46 Aligned_cols=255 Identities=26% Similarity=0.448 Sum_probs=209.3
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
+.|+..+.||+|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.++|+||+++++++.. ....|+|
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 80 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLK--GTKLWII 80 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhccccc--CCceEEE
Confidence 468888999999999999999999999999999875532 3345678899999999999999999999987 5679999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
|||++++.+...... ..+++..++.++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++....... ...
T Consensus 81 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~~ 158 (277)
T cd06642 81 MEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKR 158 (277)
T ss_pred EEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc-hhh
Confidence 999998766555543 468999999999999999999999999999999999999999999999999997664322 122
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFK 357 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 357 (495)
....++..|+|||++.+ ..++.++|||||||++|+|++|.+||...........+... .
T Consensus 159 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~--~------------------ 217 (277)
T cd06642 159 NTFVGTPFWMAPEVIKQ-SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN--S------------------ 217 (277)
T ss_pred hcccCcccccCHHHhCc-CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC--C------------------
Confidence 33467889999998876 46789999999999999999999999765544433222110 0
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.......++.++.+||.+||..||.+|||+.++|+||||..
T Consensus 218 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 218 --------PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred --------CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 00111245677899999999999999999999999999864
No 249
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=5.2e-41 Score=327.65 Aligned_cols=249 Identities=20% Similarity=0.340 Sum_probs=203.6
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
.+|.+.+.||+|+||.||+|.+..++..||+|++.... .....+.+|+.+++.++|+||+++++++.. +..++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--EPPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcC--CCCcEEE
Confidence 56999999999999999999999999999999987442 234567889999999999999999999876 5678999
Q ss_pred EeeccCChhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 198 FKYMEHDLAGLAAS--PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 198 ~e~~~~~l~~~~~~--~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
|||+.++.+..... ....+++..+..++.||+.||.|||++||+||||||+|||+++++.+||+|||++.........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~ 160 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 160 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence 99998765544432 2346899999999999999999999999999999999999999999999999999876533222
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
......++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+.....
T Consensus 161 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~---------------- 223 (263)
T cd05052 161 AHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYR---------------- 223 (263)
T ss_pred ccCCCCCccccCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC----------------
Confidence 1122234667999998865 568899999999999999998 9999998776666555432110
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
......+|.++.+||.+||..||++|||+.++++
T Consensus 224 ------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 224 ------------MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred ------------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 0112356788999999999999999999999986
No 250
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.5e-41 Score=349.04 Aligned_cols=253 Identities=22% Similarity=0.316 Sum_probs=198.8
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCC-----eEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTG-----QIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRM 190 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g-----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~ 190 (495)
.++|++.+.||+|+||.||+|++..+| ..||+|++.... .......+.+|+.+|+.+ +|+|||++++++..
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~-- 113 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA-HTDEREALMSELKILSHLGQHKNIVNLLGACTH-- 113 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC-CHHHHHHHHHHHHHHHhhccCCceeeEeeEecC--
Confidence 468999999999999999999865443 579999997543 234456788999999999 89999999999877
Q ss_pred CceeEEEEeeccCChhhhhhCC----------------------------------------------------------
Q 011041 191 SCSLYLVFKYMEHDLAGLAASP---------------------------------------------------------- 212 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~~---------------------------------------------------------- 212 (495)
...+|+||||+.++.+..+...
T Consensus 114 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (374)
T cd05106 114 GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ 193 (374)
T ss_pred CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence 5679999999987654433211
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC-Ccc
Q 011041 213 ------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP-MTS 279 (495)
Q Consensus 213 ------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~-~~~ 279 (495)
...+++..+..++.||+.||.|||++||+||||||+|||+++++.+||+|||++.......... ...
T Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 1247889999999999999999999999999999999999999999999999997654322111 112
Q ss_pred ccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCC
Q 011041 280 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKP 358 (495)
Q Consensus 280 ~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 358 (495)
..+++.|+|||++.+ ..++.++|||||||++|+|++ |++||........+.++......+.
T Consensus 274 ~~~~~~y~aPE~~~~-~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~----------------- 335 (374)
T cd05106 274 ARLPVKWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMS----------------- 335 (374)
T ss_pred CCCccceeCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCcc-----------------
Confidence 234667999998865 568999999999999999997 9999987655444444332110000
Q ss_pred CcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 359 QQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 359 ~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
....+++++.+||.+||+.||.+|||+.++++
T Consensus 336 ----------~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 336 ----------RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred ----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 01235788999999999999999999999986
No 251
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.9e-41 Score=325.39 Aligned_cols=250 Identities=25% Similarity=0.429 Sum_probs=206.2
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|++.+.||+|+||.||++++..++..||+|.++.... ....+.+.+|+.+++.++|+||+++++++.+ ...+|++|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEA--DGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEE--CCEEEEEE
Confidence 58899999999999999999999999999999875532 3455678899999999999999999999987 56899999
Q ss_pred eeccCC-hhhhhhC-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 199 KYMEHD-LAGLAAS-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 199 e~~~~~-l~~~~~~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||+.++ +...+.. ....+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++....... ..
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~ 156 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-AY 156 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccc-cc
Confidence 999875 4444332 34468999999999999999999999999999999999999999999999999997664322 22
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
.....|++.|+|||++.+ ..++.++|+|||||++|+|++|.+||...+.......+......
T Consensus 157 ~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------------- 218 (255)
T cd08219 157 ACTYVGTPYYVPPEIWEN-MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYK----------------- 218 (255)
T ss_pred cccccCCccccCHHHHcc-CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCC-----------------
Confidence 234578999999998865 46889999999999999999999999887766555544321100
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
.....++..+.+||.+||..||.+|||+.++|.-
T Consensus 219 -----------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 -----------PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -----------CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0112356678899999999999999999999863
No 252
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-43 Score=347.51 Aligned_cols=266 Identities=21% Similarity=0.305 Sum_probs=235.6
Q ss_pred CCCCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 113 TPRRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 113 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
......+++++..||-|+||.|-++........+|+|++++... +....+.+..|-.||...+.|.||+||..|.+ +
T Consensus 415 a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd--~ 492 (732)
T KOG0614|consen 415 AQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRD--S 492 (732)
T ss_pred cccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhcc--c
Confidence 33456788899999999999999998776666799999987655 66777889999999999999999999999877 6
Q ss_pred ceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 192 CSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
.++||.||-|-|+.+..++..++.|.+..++.|+..+++|++|||.+|||+|||||||++++.+|-+||.|||+|+.+..
T Consensus 493 kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 493 KYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred hhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 79999999999888878888888999999999999999999999999999999999999999999999999999998875
Q ss_pred CCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 272 NHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 272 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
+ ....++||||.|+|||+++. +..+.++|.||||+++||||+|.|||.+.++...+..|++.+.. |
T Consensus 573 g--~KTwTFcGTpEYVAPEIILn-KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~-----i------ 638 (732)
T KOG0614|consen 573 G--RKTWTFCGTPEYVAPEIILN-KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK-----I------ 638 (732)
T ss_pred C--CceeeecCCcccccchhhhc-cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh-----h------
Confidence 5 44578899999999999987 45789999999999999999999999999999999999886522 1
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC-----HHHHHhCCCCCCCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT-----ATAALRSEFFTTKPYA 410 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----a~elL~hp~f~~~~~~ 410 (495)
+....++..+.+||+++...+|.+|+. +.++-+|-||.+-.|.
T Consensus 639 ----------------~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdwe 686 (732)
T KOG0614|consen 639 ----------------EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWE 686 (732)
T ss_pred ----------------hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChh
Confidence 223457888999999999999999976 8999999999987663
No 253
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.6e-42 Score=372.38 Aligned_cols=263 Identities=30% Similarity=0.480 Sum_probs=207.1
Q ss_pred CCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeecc-----
Q 011041 115 RRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSR----- 189 (495)
Q Consensus 115 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~----- 189 (495)
+...+|+.++.||+|+||.||+++++-+|+.||||+|.... .......+.+|+..|.+|+|||||+++..|...
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 45789999999999999999999999999999999998765 566677899999999999999999987622110
Q ss_pred --------------------------------------------------------------------------------
Q 011041 190 -------------------------------------------------------------------------------- 189 (495)
Q Consensus 190 -------------------------------------------------------------------------------- 189 (495)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ------------------------CC--------ceeEEEEeeccCChhhhhhCCCCCC-CHHHHHHHHHHHHHHHHHhh
Q 011041 190 ------------------------MS--------CSLYLVFKYMEHDLAGLAASPTIKF-TQAQVKCYMHQLLSGLEHCH 236 (495)
Q Consensus 190 ------------------------~~--------~~~~lv~e~~~~~l~~~~~~~~~~l-~e~~~~~i~~qil~~L~~LH 236 (495)
.. ..+||-||||+..++..++..+... ....++.+|+||++||.|+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 00 3579999999999999888877554 47788999999999999999
Q ss_pred hCCceeccCCCCCeeeCCCCcEEEeecccccccC-----------------CCCCCCCccccccCCCCCcccccCCC--C
Q 011041 237 NQHVLHRDIKGSNLLIDNEGILTIADFGLASFFD-----------------PNHKQPMTSRVVTLWYRPPELLLGAT--D 297 (495)
Q Consensus 237 ~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~-----------------~~~~~~~~~~~gt~~y~aPE~l~~~~--~ 297 (495)
++|||||||||.||||++++.|||+|||+|+... .......++.+||.-|+|||++.+.. .
T Consensus 715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~ 794 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK 794 (1351)
T ss_pred hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence 9999999999999999999999999999998721 01112457789999999999997765 6
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCc
Q 011041 298 YGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSS 377 (495)
Q Consensus 298 ~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 377 (495)
|+.++|+||||||||||+. ||.. ..+-...+..+- .+ .+|... ..+..--+.-
T Consensus 795 Yn~KiDmYSLGIVlFEM~y---PF~T--sMERa~iL~~LR-~g--------~iP~~~-------------~f~~~~~~~e 847 (1351)
T KOG1035|consen 795 YNSKIDMYSLGIVLFEMLY---PFGT--SMERASILTNLR-KG--------SIPEPA-------------DFFDPEHPEE 847 (1351)
T ss_pred ccchhhhHHHHHHHHHHhc---cCCc--hHHHHHHHHhcc-cC--------CCCCCc-------------ccccccchHH
Confidence 9999999999999999995 4543 333333332211 11 111100 0011112445
Q ss_pred HHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 378 LPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 378 ~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
..+|..||+.||.+||||.|+|++.||-
T Consensus 848 ~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 848 ASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 6799999999999999999999999874
No 254
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.2e-40 Score=322.03 Aligned_cols=254 Identities=30% Similarity=0.505 Sum_probs=214.9
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|++.+.||+|++|.||++++..+++.|++|.+............+.+|++++++++|+||+++++++.+ ....|++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET--SDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe--CCEEEEEE
Confidence 5889999999999999999999999999999998776555667789999999999999999999999877 56899999
Q ss_pred eeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCc
Q 011041 199 KYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMT 278 (495)
Q Consensus 199 e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~ 278 (495)
||+++..+..+......+++..+..++.||+.+|.|||++||+||||||+||+++.++.++|+|||++........ ...
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~ 157 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK-DDA 157 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc-ccc
Confidence 9999876666665556899999999999999999999999999999999999999999999999999987754332 223
Q ss_pred cccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCC
Q 011041 279 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKP 358 (495)
Q Consensus 279 ~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 358 (495)
...++..|+|||.+.+ ..++.++||||||+++|+|++|.+||...+......++... .
T Consensus 158 ~~~~~~~y~~pe~~~~-~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~------------------- 215 (254)
T cd06627 158 SVVGTPYWMAPEVIEM-SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD--D------------------- 215 (254)
T ss_pred ccccchhhcCHhhhcC-CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc--C-------------------
Confidence 4567899999998866 34789999999999999999999999877655544443210 0
Q ss_pred CcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 359 QQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 359 ~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.......+++.+.++|.+||..||++|||+.+++.||||
T Consensus 216 -------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 216 -------HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred -------CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 001123457788999999999999999999999999998
No 255
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=8.4e-41 Score=323.20 Aligned_cols=254 Identities=28% Similarity=0.478 Sum_probs=213.5
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|.+.+.||.|+||.||++.+..++..|++|++............+.+|+++++.++|+|++++++.+.. ....++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~--~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE--KGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec--CCEEEEEE
Confidence 5889999999999999999999999999999998766655667788899999999999999999999877 47899999
Q ss_pred eeccCChhhhhh-CC---CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 199 KYMEHDLAGLAA-SP---TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 199 e~~~~~l~~~~~-~~---~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
||++++.+.... .. ...+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 157 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV- 157 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc-
Confidence 999975444433 32 3679999999999999999999999999999999999999999999999999998765432
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
.......|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...+..+....+.....
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~---------------- 220 (258)
T cd08215 158 DLAKTVVGTPYYLSPELCQN-KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY---------------- 220 (258)
T ss_pred ceecceeeeecccChhHhcc-CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC----------------
Confidence 22334578999999998765 4578999999999999999999999988775555544432110
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
......++..+.++|..||..||.+|||+.++|+||||
T Consensus 221 ------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 221 ------------PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred ------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 01112467788999999999999999999999999997
No 256
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=9.4e-41 Score=330.23 Aligned_cols=257 Identities=25% Similarity=0.457 Sum_probs=211.7
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
..|...+.||+|++|.||++.+..+++.|++|++.... ......+.+|+.+++.++|+||+++++++.. ....|++
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~--~~~~~~v 94 (285)
T cd06648 19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--QQRRELLFNEVVIMRDYQHPNIVEMYSSYLV--GDELWVV 94 (285)
T ss_pred HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHHcCCCChheEEEEEEc--CCeEEEE
Confidence 34666689999999999999999999999999986433 2334567899999999999999999999876 5678999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
+||+.++.+...... ..+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++....... ...
T Consensus 95 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~-~~~ 172 (285)
T cd06648 95 MEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV-PRR 172 (285)
T ss_pred EeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC-ccc
Confidence 999988766655544 468999999999999999999999999999999999999999999999999887553322 122
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFK 357 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 357 (495)
....|++.|+|||++.+ ..++.++|||||||++|+|++|.+||...+....+..+.... +.
T Consensus 173 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~--~~---------------- 233 (285)
T cd06648 173 KSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL--PP---------------- 233 (285)
T ss_pred ccccCCccccCHHHhcC-CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC--CC----------------
Confidence 34568999999998876 458899999999999999999999998877766666554321 00
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
.......++..+.+||.+||..||.+|||+.++|+||||...
T Consensus 234 --------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 275 (285)
T cd06648 234 --------KLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKA 275 (285)
T ss_pred --------CCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccC
Confidence 001112366789999999999999999999999999999874
No 257
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=4e-41 Score=327.06 Aligned_cols=254 Identities=30% Similarity=0.446 Sum_probs=208.6
Q ss_pred ecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCC
Q 011041 126 IGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHD 204 (495)
Q Consensus 126 LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~ 204 (495)
||.|+||.||++++..+|+.|++|++..... .......+.+|+.+++.++|+||+++++.+.. ....|++|||+.++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~ 78 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG--KKNLYLVMEYLPGG 78 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec--CcEEEEEEecCCCC
Confidence 6899999999999999999999999976543 23456678899999999999999999999876 56799999999876
Q ss_pred hhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC-------CCC
Q 011041 205 LAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK-------QPM 277 (495)
Q Consensus 205 l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~-------~~~ 277 (495)
.+..+......+++..+..++.||+.||.|||++||+|+||+|+|||++.++.++|+|||++........ ...
T Consensus 79 ~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 158 (265)
T cd05579 79 DLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKED 158 (265)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccc
Confidence 5555554444799999999999999999999999999999999999999999999999999876533211 122
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFK 357 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 357 (495)
....++..|++||++.+ ..++.++|||||||++|+|++|..||...+..+....+.... .. |..
T Consensus 159 ~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--~~---~~~---------- 222 (265)
T cd05579 159 KRIVGTPDYIAPEVILG-QGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGK--IE---WPE---------- 222 (265)
T ss_pred cCcccCccccCHHHhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--cC---CCc----------
Confidence 34567889999998876 447889999999999999999999998888777666654311 10 000
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCH---HHHHhCCCCCCCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTA---TAALRSEFFTTKPY 409 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta---~elL~hp~f~~~~~ 409 (495)
...+++.+.+||.+||+.||.+|||+ .++|+||||+...|
T Consensus 223 ------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 223 ------------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGIDW 265 (265)
T ss_pred ------------cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCCC
Confidence 01257888999999999999999999 99999999986543
No 258
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.3e-41 Score=341.44 Aligned_cols=278 Identities=23% Similarity=0.352 Sum_probs=204.2
Q ss_pred eeeccc--CceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQG--TYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G--~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
..||+| +||+||+|++..+|+.||+|++..........+.+.+|+.+++.++||||+++++++.. ....|+||||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~--~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT--GSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec--CCceEEEEecc
Confidence 346666 99999999999999999999998766555666889999999999999999999999987 56799999999
Q ss_pred cCChhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC---
Q 011041 202 EHDLAGLAASP--TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP--- 276 (495)
Q Consensus 202 ~~~l~~~~~~~--~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~--- 276 (495)
.++.+..+... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.++++||+.+..........
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence 97655544432 2358999999999999999999999999999999999999999999999998654332111000
Q ss_pred ---CccccccCCCCCcccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 277 ---MTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 277 ---~~~~~gt~~y~aPE~l~~~-~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
.....++..|+|||++.+. ..++.++|||||||++|+|++|.+||.+......+..+....... .|.....+.
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 238 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYS---PLDITTFPC 238 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCC---Cccccccch
Confidence 0112346679999998653 347899999999999999999999998876655544443321110 010000000
Q ss_pred Cc-----------------cCCC----CcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 353 AT-----------------IFKP----QQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 353 ~~-----------------~~~~----~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.. .... ..............+++.+.+||.+||+.||.+|||+.++|+||||..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~ 313 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ 313 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence 00 0000 000000011112345677899999999999999999999999999975
No 259
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4e-42 Score=350.75 Aligned_cols=254 Identities=24% Similarity=0.391 Sum_probs=216.4
Q ss_pred eeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC--ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 121 EKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL--EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 121 ~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+....||+|+|-+||+|.|..+|-.||.-.++...+ .+...+.|..|+.+|+.|+|||||++|++|.+.....+.+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 344679999999999999999999999877665544 566678999999999999999999999999987777899999
Q ss_pred eeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCC--ceeccCCCCCeeeCC-CCcEEEeecccccccCCCCCC
Q 011041 199 KYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQH--VLHRDIKGSNLLIDN-EGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 199 e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~g--ivHrDlKp~NILl~~-~~~vkL~DFG~a~~~~~~~~~ 275 (495)
|+|..|.+..+....+.++...++.|++||+.||.|||++. |||||||.+||||+. .|.|||+|+|||+.....
T Consensus 123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s--- 199 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS--- 199 (632)
T ss_pred ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc---
Confidence 99999999888888889999999999999999999999874 999999999999987 589999999999987543
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTE-VEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~-~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
...+.+|||.|||||++. ..|+..+||||||.+++||+|+..||...+. ..+++++.. |..+.-+ .
T Consensus 200 ~aksvIGTPEFMAPEmYE--E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~S--GiKP~sl-~-------- 266 (632)
T KOG0584|consen 200 HAKSVIGTPEFMAPEMYE--ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTS--GIKPAAL-S-------- 266 (632)
T ss_pred ccceeccCccccChHHHh--hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHc--CCCHHHh-h--------
Confidence 235579999999999885 5799999999999999999999999987554 455555543 2222211 0
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
+--.+++++||.+||.. ..+|+|+.|+|.||||...
T Consensus 267 ----------------kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 267 ----------------KVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred ----------------ccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 11247899999999999 9999999999999999975
No 260
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=345.10 Aligned_cols=254 Identities=20% Similarity=0.317 Sum_probs=208.7
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++..++..||+|.||+||+|++.. .||||++..+...++..+.|++|+.+|++-+|.||+-+.|++... . +.|
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p--~-~AI 464 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP--P-LAI 464 (678)
T ss_pred HHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC--c-eee
Confidence 4667888999999999999998764 599999999988889999999999999999999999999999873 2 499
Q ss_pred EEeeccCChhhh-hhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC-CCC
Q 011041 197 VFKYMEHDLAGL-AASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP-NHK 274 (495)
Q Consensus 197 v~e~~~~~l~~~-~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~-~~~ 274 (495)
|+-+|+|..+.. +......|.....+.|++||+.|+.|||.++|||||||..||||.+++.|||+|||++..-.- ...
T Consensus 465 iTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~ 544 (678)
T KOG0193|consen 465 ITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGE 544 (678)
T ss_pred eehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccc
Confidence 999999976654 444566799999999999999999999999999999999999999999999999999975321 122
Q ss_pred CCCccccccCCCCCcccccC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
.......|...|||||++.. ..+|++.+|||||||++|||++|..||...+...++..+=+..+.+.
T Consensus 545 ~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd----------- 613 (678)
T KOG0193|consen 545 QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD----------- 613 (678)
T ss_pred cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc-----------
Confidence 33344567888999999853 45799999999999999999999999985554444333222111111
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
......+.+.++++|+..|+.+++++||+..+||.
T Consensus 614 -------------~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 614 -------------LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred -------------chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 23334556779999999999999999999999986
No 261
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=9.9e-41 Score=328.32 Aligned_cols=255 Identities=27% Similarity=0.462 Sum_probs=211.0
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
+-|++++.||.|+||.||+|.+..++..||||++..... ......+.+|+.++..++||||+++++++.. +...|+|
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 80 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--DTKLWII 80 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe--CCeEEEE
Confidence 457888999999999999999999999999999865432 3445678899999999999999999999987 5679999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
|||+.++.+..+... ..+++..+..++.||+.+|.|||++|++|+||||+||+++.++.++|+|||++....... ...
T Consensus 81 ~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-~~~ 158 (277)
T cd06641 81 MEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKR 158 (277)
T ss_pred EEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch-hhh
Confidence 999998766655543 368999999999999999999999999999999999999999999999999987654322 122
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFK 357 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 357 (495)
....++..|+|||.+.+ ..++.++|+|||||++|+|++|.+||...+.......+... .+
T Consensus 159 ~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~----------------- 218 (277)
T cd06641 159 NTFVGTPFWMAPEVIKQ-SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN--NP----------------- 218 (277)
T ss_pred ccccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC--CC-----------------
Confidence 34467889999998865 46788999999999999999999999876655544443211 00
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
......++.++.++|.+||..||.+||++.++++||||..
T Consensus 219 ---------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~ 258 (277)
T cd06641 219 ---------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVR 258 (277)
T ss_pred ---------CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhh
Confidence 0112346778899999999999999999999999999986
No 262
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=6.9e-41 Score=328.13 Aligned_cols=248 Identities=23% Similarity=0.348 Sum_probs=195.6
Q ss_pred CCeeeeeee--cccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCcee
Q 011041 118 DTFEKLDKI--GQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 118 ~~y~~~~~L--G~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~ 194 (495)
+.|++.+.+ |+|+||.||+++++.++..+|+|.+....... .|+.+...+ +|+||+++++.+.. ...+
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~--~~~~ 84 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTT--LKGH 84 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEec--CCee
Confidence 466676665 99999999999999999999999987543221 123233322 79999999999987 4579
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC-cEEEeecccccccCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG-ILTIADFGLASFFDPNH 273 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~-~vkL~DFG~a~~~~~~~ 273 (495)
|+||||+.++.+..+......+++..+..++.||+.||.|||+.||+||||||+||+++.++ .++|+|||++......
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~- 163 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP- 163 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC-
Confidence 99999998765555544445899999999999999999999999999999999999999998 9999999998765422
Q ss_pred CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHhcCCCChhhhhhCCCCC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQ-LHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~-~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
....++..|+|||++.+ ..++.++|||||||++|+|++|..||......+. ...+.... ..
T Consensus 164 ----~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~------------ 225 (267)
T PHA03390 164 ----SCYDGTLDYFSPEKIKG-HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QK------------ 225 (267)
T ss_pred ----ccCCCCCcccChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cc------------
Confidence 23467899999999876 5688999999999999999999999986544332 11111110 00
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC-HHHHHhCCCCCC
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT-ATAALRSEFFTT 406 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-a~elL~hp~f~~ 406 (495)
.....+.+++.+.+||.+||+.||.+|++ .+++|+||||.+
T Consensus 226 -------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 226 -------------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred -------------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 01122357888999999999999999997 599999999963
No 263
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.6e-40 Score=328.92 Aligned_cols=261 Identities=18% Similarity=0.258 Sum_probs=204.8
Q ss_pred CCCeeeeeeecccCceEEEEEEECC-----CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTL-----TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
.++|++.+.||+|+||.||+|.++. .+..||+|.+..... ......+.+|+.+++.++|+||+++++++.. .
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 81 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-LRERIEFLNEASVMKGFTCHHVVRLLGVVSK--G 81 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC--C
Confidence 4789999999999999999997652 355899998865432 2334457789999999999999999999876 4
Q ss_pred ceeEEEEeeccCChhhhhhCC----------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEe
Q 011041 192 CSLYLVFKYMEHDLAGLAASP----------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIA 261 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~----------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~ 261 (495)
...|+||||+.++.+...... ...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEEC
Confidence 578999999987655544321 1235677889999999999999999999999999999999999999999
Q ss_pred ecccccccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCC
Q 011041 262 DFGLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGS 339 (495)
Q Consensus 262 DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~ 339 (495)
|||++........ .......++..|+|||.+.+ ..++.++|||||||++|||++ |.+||.+.+..+....+.... .
T Consensus 162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~-~ 239 (288)
T cd05061 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG-Y 239 (288)
T ss_pred cCCccccccccccccccCCCcccccccCHHHhcc-CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-C
Confidence 9999875532211 11122345678999998875 468999999999999999998 789998877766555443210 0
Q ss_pred CChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh------CCCCCCCCC
Q 011041 340 PSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR------SEFFTTKPY 409 (495)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~------hp~f~~~~~ 409 (495)
......+++.+.+||.+||+.||.+|||+.++++ ||||....|
T Consensus 240 ---------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~ 288 (288)
T cd05061 240 ---------------------------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 288 (288)
T ss_pred ---------------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence 0011235678999999999999999999999987 999987544
No 264
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=360.74 Aligned_cols=252 Identities=23% Similarity=0.384 Sum_probs=201.3
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-CCCeeeeec-eeecc---C-C
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLD-HPNVVKLEG-LVTSR---M-S 191 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~-~~~~~---~-~ 191 (495)
.++++.+.|.+|||+.||+|++...|..||||++-.. +....+.+.+||.+|+.|. |+|||.+++ ..... . .
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 5688899999999999999999998899999998754 5778889999999999996 999999999 33221 1 2
Q ss_pred ceeEEEEeecc-CChhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHhhhCC--ceeccCCCCCeeeCCCCcEEEeeccccc
Q 011041 192 CSLYLVFKYME-HDLAGLAASP-TIKFTQAQVKCYMHQLLSGLEHCHNQH--VLHRDIKGSNLLIDNEGILTIADFGLAS 267 (495)
Q Consensus 192 ~~~~lv~e~~~-~~l~~~~~~~-~~~l~e~~~~~i~~qil~~L~~LH~~g--ivHrDlKp~NILl~~~~~vkL~DFG~a~ 267 (495)
..++|.||||. |+|.+.+..+ ...|+|.++..||+|+++||.+||... |||||||-|||||+.+|+.||||||.|+
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 45789999999 5777766532 234999999999999999999999887 9999999999999999999999999997
Q ss_pred ccCCCCCCCC--------ccccccCCCCCcccc--cCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Q 011041 268 FFDPNHKQPM--------TSRVVTLWYRPPELL--LGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLC 337 (495)
Q Consensus 268 ~~~~~~~~~~--------~~~~gt~~y~aPE~l--~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~ 337 (495)
..-..-.... -...-|+.|+|||++ .+....+.++|||+|||+||.|++...||.+.....++.--+
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y--- 271 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNY--- 271 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccc---
Confidence 4321110000 012349999999997 234678999999999999999999999998765443322211
Q ss_pred CCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCC
Q 011041 338 GSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSE 402 (495)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp 402 (495)
.++ .++.++..+.+||+.||+.||.+||++.|++.+-
T Consensus 272 -~~P---------------------------~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 272 -SFP---------------------------PFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred -cCC---------------------------CCccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 111 1234677899999999999999999999999743
No 265
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.6e-41 Score=331.62 Aligned_cols=264 Identities=24% Similarity=0.397 Sum_probs=209.8
Q ss_pred CeeeeeeecccCceEEEEEEEC---CCCeEEEeEEEecCCC--ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCc
Q 011041 119 TFEKLDKIGQGTYSNVYKARDT---LTGQIVALKKVRFDNL--EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~---~~g~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 192 (495)
.|++.+.||.|+||.||+|++. .+|..||+|++..... .....+.+.+|+.+++.+ +|+||+.+++++.. +.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~--~~ 78 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT--DT 78 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec--CC
Confidence 4889999999999999999875 4789999999875432 223345678899999999 69999999999877 56
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.+|+||||+.++.+...+.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 79 KLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred eEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 79999999998766655555567899999999999999999999999999999999999999999999999999876543
Q ss_pred CCCCCccccccCCCCCcccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
.........|+..|+|||.+.+. ..++.++|||||||++|+|++|..||...+.......+...+....
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~---------- 228 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE---------- 228 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccC----------
Confidence 33333455789999999988643 3467899999999999999999999975443322222222110000
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCcc-----CHHHHHhCCCCCCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQ-----TATAALRSEFFTTKPY 409 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~-----ta~elL~hp~f~~~~~ 409 (495)
......+++.+.+||.+||..||.+|+ ++.+++.||||+...|
T Consensus 229 ---------------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 276 (290)
T cd05613 229 ---------------PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINW 276 (290)
T ss_pred ---------------CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCH
Confidence 001134667789999999999999997 8999999999987654
No 266
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3e-40 Score=319.04 Aligned_cols=258 Identities=29% Similarity=0.496 Sum_probs=212.7
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|.+.+.||+|++|.||+|.+..++..|++|++............+.+|+.++++++|+||+++++.+.......+++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 48889999999999999999999999999999987665556678899999999999999999999998874236899999
Q ss_pred eeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC-CC
Q 011041 199 KYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ-PM 277 (495)
Q Consensus 199 e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~-~~ 277 (495)
||+.++.+..+......+++..+..++.|++.+|.|||+.|++|+||+|+||+++.++.++|+|||.+......... ..
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (260)
T cd06606 81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT 160 (260)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence 99977666655555558999999999999999999999999999999999999999999999999999877544321 12
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTE-VEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~-~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
....++..|++||.+.+ ..++.++|||||||++|+|++|..||..... ......+.. ...
T Consensus 161 ~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~----------------- 221 (260)
T cd06606 161 GSVRGTPYWMAPEVIRG-EEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS-SGE----------------- 221 (260)
T ss_pred cCCCCCccccCHhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc-cCC-----------------
Confidence 34568899999998865 4478999999999999999999999987662 222211110 000
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.......++..+.+||.+||..||.+||++.++|+||||
T Consensus 222 ---------~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 222 ---------PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred ---------CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 111223457889999999999999999999999999997
No 267
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.2e-40 Score=324.02 Aligned_cols=254 Identities=25% Similarity=0.397 Sum_probs=199.8
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
.+.....||+|+||.||+|++..++..||+|.+.... ....+.+.+|+.+++.++|+||+++++++.. ....|+||
T Consensus 9 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 84 (268)
T cd06624 9 ENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSE--NGFFKIFM 84 (268)
T ss_pred cCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeecc--CCEEEEEE
Confidence 3344468999999999999999999999999887543 3445678899999999999999999999877 56899999
Q ss_pred eeccCChhhhhhC-CCCCC--CHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC-CCcEEEeecccccccCCCCC
Q 011041 199 KYMEHDLAGLAAS-PTIKF--TQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN-EGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 199 e~~~~~l~~~~~~-~~~~l--~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~-~~~vkL~DFG~a~~~~~~~~ 274 (495)
||+.++.+..... ....+ ++..+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||++.......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~- 163 (268)
T cd06624 85 EQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN- 163 (268)
T ss_pred ecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC-
Confidence 9998765554443 33345 88899999999999999999999999999999999986 6799999999987654322
Q ss_pred CCCccccccCCCCCcccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHhcCCCChhhhhhCCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQ-LHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~-~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
.......|++.|+|||++.+. ..++.++|||||||++|+|++|.+||........ ...+ .....
T Consensus 164 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~-~~~~~------------- 229 (268)
T cd06624 164 PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV-GMFKI------------- 229 (268)
T ss_pred CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh-hhhcc-------------
Confidence 222344678999999987543 3478999999999999999999999975432211 1111 00000
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.......+++++.+||.+||..||.+|||+.+++.||||
T Consensus 230 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 230 -------------HPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred -------------CCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 011123466788999999999999999999999999997
No 268
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.6e-40 Score=322.75 Aligned_cols=248 Identities=20% Similarity=0.314 Sum_probs=200.7
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|++.+.||+|+||.||++..+. +..+|+|.+...... ...+.+|+.+|+.++||||+++++++.. ...+|+|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~iv 77 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQ--QKPLYIV 77 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEcc--CCCEEEE
Confidence 579999999999999999998754 567999988654332 3457789999999999999999999877 5679999
Q ss_pred EeeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 198 FKYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 198 ~e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
|||+.++.+.... .....+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++..........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05114 78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS 157 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceec
Confidence 9999866544443 334568999999999999999999999999999999999999999999999999987653322222
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
.....++..|+|||++.+ ..++.++|||||||++|+|++ |++||...+..+.+..+.......
T Consensus 158 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~--------------- 221 (256)
T cd05114 158 SSGAKFPVKWSPPEVFNF-SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLY--------------- 221 (256)
T ss_pred cCCCCCchhhCChhhccc-CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCC---------------
Confidence 222344668999998865 468899999999999999999 999999888777777664321000
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....+.++.+||.+||..||.+|||+.++++
T Consensus 222 -------------~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 222 -------------RPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred -------------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 01124567899999999999999999999986
No 269
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4e-41 Score=341.12 Aligned_cols=254 Identities=21% Similarity=0.326 Sum_probs=199.6
Q ss_pred CCeeeeeeecccCceEEEEEEEC-----CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCC
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDT-----LTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~ 191 (495)
++|++.+.||+|+||.||+|++. .+++.||+|+++... .......+.+|+.++.++ +|+||+++++++... +
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~-~ 84 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKP-G 84 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC-C
Confidence 57999999999999999999754 345789999987543 334456677899999999 899999999987653 4
Q ss_pred ceeEEEEeeccCChhhhhhCC-----------------------------------------------------------
Q 011041 192 CSLYLVFKYMEHDLAGLAASP----------------------------------------------------------- 212 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~----------------------------------------------------------- 212 (495)
..++++|||+.++.+..++..
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 578999999998655443321
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC-CCccccccCCCCCc
Q 011041 213 --TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ-PMTSRVVTLWYRPP 289 (495)
Q Consensus 213 --~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~gt~~y~aP 289 (495)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+...... ......++..|+||
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP 244 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 244 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence 125789999999999999999999999999999999999999999999999999875432211 12233557789999
Q ss_pred ccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCccccccccc
Q 011041 290 ELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAE 368 (495)
Q Consensus 290 E~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (495)
|++.+ ..++.++|||||||+||+|++ |.+||.+....+.+.......-.+ .
T Consensus 245 E~~~~-~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~ 296 (337)
T cd05054 245 ESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRM---------------------------R 296 (337)
T ss_pred HHhcC-CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCC---------------------------C
Confidence 98876 568999999999999999998 999998765444443332211000 0
Q ss_pred ccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 369 TFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 369 ~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
....+++++.+++.+||+.+|++||++.++++|
T Consensus 297 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 297 APEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 112356778999999999999999999999975
No 270
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-43 Score=381.56 Aligned_cols=259 Identities=27% Similarity=0.457 Sum_probs=219.7
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
-+|+...+||.|.||.||.|.+..+|...|+|.|............+.+|..+|..|+|||||+++|+-.++ ..+||.
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHR--ekv~IF 1312 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHR--EKVYIF 1312 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecH--HHHHHH
Confidence 467778899999999999999999999999999987655556667788999999999999999999998774 468999
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC---
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK--- 274 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~--- 274 (495)
||||+++.+..+...+...+|...+.|..|++.||.|||++|||||||||+||||+.+|.+|++|||.|..+.....
T Consensus 1313 MEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred HHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence 99999999988888887889999999999999999999999999999999999999999999999999987765421
Q ss_pred CCCccccccCCCCCcccccCCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGAT--DYGVGVDLWSAGCILAELLAEKPIMPGRT-EVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~--~~~~~~DvwSlGvil~elltG~~pf~~~~-~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
......+||+.|||||++.+.. ..+.+.|||||||++.||+||+.||..-+ +..++.++-- |..+
T Consensus 1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~--gh~P---------- 1460 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAA--GHKP---------- 1460 (1509)
T ss_pred HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhc--cCCC----------
Confidence 2234678999999999997743 45678999999999999999999998644 4444444321 1111
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.....++++..|||..||..||.+|+++.|+|+|.|-+.
T Consensus 1461 ----------------q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1461 ----------------QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred ----------------CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence 112348899999999999999999999999999998764
No 271
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.4e-40 Score=325.40 Aligned_cols=253 Identities=19% Similarity=0.256 Sum_probs=201.7
Q ss_pred eeeeeeecccCceEEEEEEECC---CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC----Cc
Q 011041 120 FEKLDKIGQGTYSNVYKARDTL---TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM----SC 192 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~---~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~ 192 (495)
|++++.||+|+||.||+|.+.. ++..||+|.+............+.+|+.+++.++|+||+++++++.... ..
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5778999999999999998764 3478999999876555566678899999999999999999999875522 13
Q ss_pred eeEEEEeeccCChhhhhh------CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccc
Q 011041 193 SLYLVFKYMEHDLAGLAA------SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLA 266 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~------~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a 266 (495)
..+++|||+.++.+.... .....+++..+..++.||+.||.|||++||+||||||+|||+++++.+||+|||++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 479999999976554333 12246899999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhh
Q 011041 267 SFFDPNHKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEY 344 (495)
Q Consensus 267 ~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~ 344 (495)
......... ......++..|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+.+..+.... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~---- 233 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN--R---- 233 (273)
T ss_pred eeccccccccccccccCCccccCHhhccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--C----
Confidence 865433211 1112234678999998765 568999999999999999999 999998877766655543211 0
Q ss_pred hhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 345 WKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
......++.++.+||.+||+.||.+|||+.+++++
T Consensus 234 ----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 234 ----------------------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred ----------------------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 01123467789999999999999999999999874
No 272
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1e-40 Score=333.71 Aligned_cols=256 Identities=27% Similarity=0.473 Sum_probs=212.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
...|+..+.||+|+||.||+|+++.++..||+|.+..... .......+.+|+.+++.++|+||+++++++.. ....|
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 91 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR--EHTAW 91 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc--CCeeE
Confidence 3568888999999999999999999999999999875433 33445667789999999999999999999887 46789
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+||||+.+++...+......+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++......
T Consensus 92 lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 168 (308)
T cd06634 92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 168 (308)
T ss_pred EEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc---
Confidence 99999998877766655667899999999999999999999999999999999999999999999999998765432
Q ss_pred CCccccccCCCCCcccccC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 276 PMTSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~--~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
....+++.|+|||++.+ ...++.++|||||||++|+|++|..||...+..+....+..... +
T Consensus 169 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~------------- 232 (308)
T cd06634 169 --NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-P------------- 232 (308)
T ss_pred --ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC-C-------------
Confidence 34467889999998753 24578899999999999999999999987665554444322100 0
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
......++..+.+||.+||..+|.+||++.+++.||||..
T Consensus 233 -------------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 233 -------------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred -------------CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 0001246677899999999999999999999999999976
No 273
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.9e-41 Score=344.81 Aligned_cols=254 Identities=19% Similarity=0.278 Sum_probs=197.9
Q ss_pred CCCeeeeeeecccCceEEEEEEE-----CCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARD-----TLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRM 190 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~-----~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~ 190 (495)
.++|++.+.||+|+||.||+|++ ..++..||||++.... .....+.+.+|+.+|..+ +||||+++++++..
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~-- 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACTV-- 110 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc--
Confidence 35799999999999999999974 3567789999986543 233446788999999999 89999999999977
Q ss_pred CceeEEEEeeccCChhhhhh-CC---------------------------------------------------------
Q 011041 191 SCSLYLVFKYMEHDLAGLAA-SP--------------------------------------------------------- 212 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~-~~--------------------------------------------------------- 212 (495)
....|+||||+.++.+.... ..
T Consensus 111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 56799999999875443322 11
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 213 -----------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 213 -----------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 124788899999999999999999999999999999999999999999999999866433221
Q ss_pred C-CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 276 P-MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 276 ~-~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
. .....++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+......+.++......+
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~-~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~------------- 336 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM------------- 336 (375)
T ss_pred cccCCCCCCcceeChhHhcC-CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC-------------
Confidence 1 112334667999999876 568999999999999999998 899998765544443332211000
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
......+.++.+||..||..||.+|||+.++++.
T Consensus 337 --------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 337 --------------LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred --------------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 0012245678999999999999999999999863
No 274
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=7.8e-41 Score=328.87 Aligned_cols=252 Identities=22% Similarity=0.327 Sum_probs=204.4
Q ss_pred CCCeeeeeeecccCceEEEEEEECC-----CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTL-----TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
.++|.+.+.||+|+||.||+|++.. ++..||+|.+.... ..+....+.+|+++|+.++|+||+++++++.. .
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 80 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTE--G 80 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEec--C
Confidence 4679999999999999999998753 46789999987543 33345788899999999999999999999987 4
Q ss_pred ceeEEEEeeccCChhhhhhCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCc
Q 011041 192 CSLYLVFKYMEHDLAGLAASP--------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGI 257 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~--------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~ 257 (495)
...|+||||+.++.+..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe
Confidence 679999999987665544322 235889999999999999999999999999999999999999999
Q ss_pred EEEeecccccccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 011041 258 LTIADFGLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFK 335 (495)
Q Consensus 258 vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~ 335 (495)
+||+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+..
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~ 239 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ 239 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhcc-CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 99999999975432211 11223355788999998876 568999999999999999998 9999988877766655542
Q ss_pred hcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 336 LCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.. . ......++..+.+||.+||..||.+|||+.|+++
T Consensus 240 ~~--~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 240 GR--L--------------------------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred CC--c--------------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 11 0 0112346778999999999999999999999986
No 275
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=7.4e-41 Score=335.07 Aligned_cols=272 Identities=21% Similarity=0.298 Sum_probs=199.8
Q ss_pred CceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCChhhhh
Q 011041 130 TYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHDLAGLA 209 (495)
Q Consensus 130 ~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~ 209 (495)
++|.||.+++..+++.||||++............+.+|+.+++.++|+||+++++++.. ....|++|||+.++.+..+
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~~~ 89 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV--DSELYVVSPLMAYGSCEDL 89 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec--CCeEEEEEeccCCCCHHHH
Confidence 44556666667799999999998765566677889999999999999999999999987 5678999999997766554
Q ss_pred hCC--CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC------CCCcccc
Q 011041 210 ASP--TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK------QPMTSRV 281 (495)
Q Consensus 210 ~~~--~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~------~~~~~~~ 281 (495)
... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||.+........ .......
T Consensus 90 l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (314)
T cd08216 90 LKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSV 169 (314)
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccccccc
Confidence 432 34689999999999999999999999999999999999999999999999999875532211 1123345
Q ss_pred ccCCCCCcccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc-----
Q 011041 282 VTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI----- 355 (495)
Q Consensus 282 gt~~y~aPE~l~~~-~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~----- 355 (495)
++..|+|||++.+. ..|+.++|||||||++|+|++|.+||........+..... +.... .+.....+....
T Consensus 170 ~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~ 246 (314)
T cd08216 170 KNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVR--GTVPC-LLDKSTYPLYEDSMSQS 246 (314)
T ss_pred ccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--ccCcc-ccccCchhhhcCCcCcc
Confidence 67889999998653 3588999999999999999999999987665443322222 11110 000000000000
Q ss_pred ---CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 356 ---FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 356 ---~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.................++.++.+||..||.+||++|||+.++|+||||+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~ 300 (314)
T cd08216 247 RSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQ 300 (314)
T ss_pred cccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhh
Confidence 000000000111112234567889999999999999999999999999985
No 276
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2e-40 Score=323.73 Aligned_cols=252 Identities=29% Similarity=0.465 Sum_probs=203.8
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++.+.||+|+||.||+|++..+++.||||.+..... .......+.+|+.+++.++||||+++++++.. ....|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~ 79 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE--DNELNI 79 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE--CCeEEE
Confidence 579999999999999999999999999999998875432 45556678899999999999999999999887 467999
Q ss_pred EEeeccCChhhhhh----CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 197 VFKYMEHDLAGLAA----SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 197 v~e~~~~~l~~~~~----~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
+|||+.++.+..+. .....+++..+..++.||+.||.|||++||+|+||||+||||+.++.++|+|||++..+...
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~ 159 (267)
T cd08228 80 VLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccch
Confidence 99999976554333 23445899999999999999999999999999999999999999999999999998876432
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCChhhhhhCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTE--VEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~--~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
. .......+++.|+|||.+.+ ..++.++|+|||||++|+|++|..||..... .+....+ ...+.++.
T Consensus 160 ~-~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~-------- 228 (267)
T cd08228 160 T-TAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKI-EQCDYPPL-------- 228 (267)
T ss_pred h-HHHhcCCCCccccChhhhcc-CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHH-hcCCCCCC--------
Confidence 2 12234568899999998876 4578999999999999999999999975432 2222222 21111110
Q ss_pred CCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 351 PHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
....++..+.+||.+||..||.+||++.++|+
T Consensus 229 ------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 229 ------------------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred ------------------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 01235677899999999999999999999997
No 277
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-40 Score=325.65 Aligned_cols=284 Identities=26% Similarity=0.393 Sum_probs=224.2
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-----C---CCeeeeeceeec
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLD-----H---PNVVKLEGLVTS 188 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-----H---pnIv~l~~~~~~ 188 (495)
.++|.+.++||.|.|++||+|.|..+.+.||+|+++.. ....+....||++|++++ | .+||+|++.|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 37899999999999999999999999999999998743 344556678999999982 2 479999999965
Q ss_pred --cCCceeEEEEeeccCChhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHhh-hCCceeccCCCCCeeeC-----------
Q 011041 189 --RMSCSLYLVFKYMEHDLAGLAASP-TIKFTQAQVKCYMHQLLSGLEHCH-NQHVLHRDIKGSNLLID----------- 253 (495)
Q Consensus 189 --~~~~~~~lv~e~~~~~l~~~~~~~-~~~l~e~~~~~i~~qil~~L~~LH-~~givHrDlKp~NILl~----------- 253 (495)
..+.+++||||+++..|+.++... ...++...++.|++|||.||.||| +.||||-||||||||+.
T Consensus 154 sGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~~~~~~ 233 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDPAKDAR 233 (590)
T ss_pred cCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccchhhhhh
Confidence 345789999999999999988754 456999999999999999999999 57999999999999982
Q ss_pred --------------------------------------------------------------------------------
Q 011041 254 -------------------------------------------------------------------------------- 253 (495)
Q Consensus 254 -------------------------------------------------------------------------------- 253 (495)
T Consensus 234 ~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~ 313 (590)
T KOG1290|consen 234 EAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGNE 313 (590)
T ss_pred hhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCccc
Confidence
Q ss_pred -----------------------CC----------------------------------------------------CcE
Q 011041 254 -----------------------NE----------------------------------------------------GIL 258 (495)
Q Consensus 254 -----------------------~~----------------------------------------------------~~v 258 (495)
.. -.|
T Consensus 314 ~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~v 393 (590)
T KOG1290|consen 314 STVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIRV 393 (590)
T ss_pred cchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccceeE
Confidence 00 016
Q ss_pred EEeecccccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC------CChHHHHHH
Q 011041 259 TIADFGLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPG------RTEVEQLHK 332 (495)
Q Consensus 259 kL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~------~~~~~~~~~ 332 (495)
||+|||-|+.+. ..++.-+.|..|+||||++| ..|+..+||||++|++|||+||-.+|.. ..+++.+..
T Consensus 394 KIaDlGNACW~~----khFT~DIQTRQYRapEVllG-sgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~ 468 (590)
T KOG1290|consen 394 KIADLGNACWVH----KHFTEDIQTRQYRAPEVLLG-SGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIAL 468 (590)
T ss_pred EEeeccchhhhh----hhhchhhhhhhccCcceeec-CCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHH
Confidence 788888887654 34566678999999999998 4699999999999999999999999974 347889999
Q ss_pred HHHhcCCCChhhhhhCC-----------CCCCccCCCCcccccccccccCCCC----CCcHHHHHHhccCCCCCccCHHH
Q 011041 333 IFKLCGSPSEEYWKKSK-----------LPHATIFKPQQSYKRCIAETFKDFP----PSSLPLIETLLAIDPAERQTATA 397 (495)
Q Consensus 333 i~~~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~s----~~~~~Li~~~L~~dP~~R~ta~e 397 (495)
|+.++|..+.......+ |.+....++-.-+. .+.+ -..+| .++.+||.-||+.+|++|+||.+
T Consensus 469 i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~-VL~e-KY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~ 546 (590)
T KOG1290|consen 469 IMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYE-VLIE-KYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQ 546 (590)
T ss_pred HHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHH-HHHH-HhCCCHHHHHHHHHHHHHHHhcCccccccHHH
Confidence 99999988765433222 22222222222111 1111 12233 35778999999999999999999
Q ss_pred HHhCCCCCCCCCC
Q 011041 398 ALRSEFFTTKPYA 410 (495)
Q Consensus 398 lL~hp~f~~~~~~ 410 (495)
+|+|||+...+.+
T Consensus 547 cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 547 CLKHPWLNPVAGP 559 (590)
T ss_pred HhcCccccCCCCC
Confidence 9999999976554
No 278
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.2e-40 Score=324.34 Aligned_cols=253 Identities=18% Similarity=0.252 Sum_probs=199.5
Q ss_pred eeeeeeecccCceEEEEEEECCCCe--EEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeecc----CCce
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTGQ--IVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSR----MSCS 193 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g~--~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~----~~~~ 193 (495)
|.+.+.||+|+||.||+|++..++. .||+|.+............+.+|+.+++.++|+||+++++++... ....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3467889999999999999887775 689999876655566677888999999999999999999876431 1235
Q ss_pred eEEEEeeccCChhhhhh------CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeeccccc
Q 011041 194 LYLVFKYMEHDLAGLAA------SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLAS 267 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~------~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~ 267 (495)
.+++|||+.++.+.... .....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence 78999999875444322 123358999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhh
Q 011041 268 FFDPNHKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYW 345 (495)
Q Consensus 268 ~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~ 345 (495)
.+...... ......+++.|++||.+.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+.... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~----- 232 (272)
T cd05075 161 KIYNGDYYRQGRIAKMPVKWIAIESLAD-RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN--R----- 232 (272)
T ss_pred ccCcccceecCCcccCCcccCCHHHccC-CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC--C-----
Confidence 76432211 1122245678999998875 568999999999999999999 899998877666555443210 0
Q ss_pred hhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 346 KKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
......++..+.+||.+||..||.+|||+.+++++
T Consensus 233 ---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 233 ---------------------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred ---------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 00113466778999999999999999999999863
No 279
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.9e-40 Score=323.00 Aligned_cols=249 Identities=21% Similarity=0.340 Sum_probs=202.4
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|+++++||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|+.+++.++|+||+++++++.. ....|+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 78 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTK--EEPIYI 78 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC--CCCcEE
Confidence 478999999999999999999865 55679999876433 234678899999999999999999998876 567899
Q ss_pred EEeeccCChhhhhh-C-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEHDLAGLAA-S-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~~l~~~~~-~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
+|||+.++.+..+. . ....+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++........
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05072 79 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 158 (261)
T ss_pred EEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence 99999865444333 2 345689999999999999999999999999999999999999999999999999987653322
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
.......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+......
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~-------------- 223 (261)
T cd05072 159 TAREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM-------------- 223 (261)
T ss_pred eccCCCccceecCCHHHhcc-CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC--------------
Confidence 22233345778999998865 567899999999999999998 99999988777766665432110
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....++.++.+||.+||..||++|||++++++
T Consensus 224 --------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 224 --------------PRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred --------------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 112346778999999999999999999999875
No 280
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2e-40 Score=320.93 Aligned_cols=252 Identities=26% Similarity=0.428 Sum_probs=210.9
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|++.+.||+|+||.||++++..+++.|++|.+............+.+|+.+++.++|+||+++++++.+ ....|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD--GNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc--CCEEEEEe
Confidence 4889999999999999999999999999999998765555566777889999999999999999999887 47899999
Q ss_pred eeccCChhhhhhC----CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 199 KYMEHDLAGLAAS----PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 199 e~~~~~l~~~~~~----~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
||+.+..+..... ....+++..+..++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-- 156 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-- 156 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC--
Confidence 9998765544332 2356899999999999999999999999999999999999999999999999999876543
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
......+++.|++||.+.+ ..++.++|+||||+++|+|++|++||...+..+....+.....
T Consensus 157 -~~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~---------------- 218 (256)
T cd08530 157 -MAKTQIGTPHYMAPEVWKG-RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY---------------- 218 (256)
T ss_pred -CcccccCCccccCHHHHCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC----------------
Confidence 2233568899999999876 5678899999999999999999999988876655444422110
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
......++.++.++|.+||..||.+|||+.++|+||++
T Consensus 219 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 219 ------------PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred ------------CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 01112456778999999999999999999999999974
No 281
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=9e-41 Score=331.77 Aligned_cols=258 Identities=26% Similarity=0.465 Sum_probs=211.0
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|.+++.||+|+||.||++.+..++..||+|.+.... ....+.+.+|+.+++.++||||+++++++.. ....|+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~l 93 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKHPNIVNYLDSYLV--GDELWV 93 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc--chHHHHHHHHHHHHhhcCCCCeeehhheeee--CCcEEE
Confidence 478999999999999999999999899999999986443 2234667889999999999999999999877 567999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
|+||+.++.+..+... ..+++.++..++.||+.||.|||++|++|+||||+||+++.++.+||+|||++........ .
T Consensus 94 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-~ 171 (293)
T cd06647 94 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 171 (293)
T ss_pred EEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc-c
Confidence 9999988766655543 3588999999999999999999999999999999999999999999999999876644322 2
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
.....+++.|++||.+.+ ..++.++|||||||++|+|++|.+||...+..+.+..+... +.+.
T Consensus 172 ~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~-~~~~--------------- 234 (293)
T cd06647 172 RSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPE--------------- 234 (293)
T ss_pred cccccCChhhcCchhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcC-CCCC---------------
Confidence 234568899999998865 46789999999999999999999999877655443322110 0000
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
......++..+.+||.+||..||.+||++.+++.|+||...
T Consensus 235 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~ 275 (293)
T cd06647 235 ----------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIA 275 (293)
T ss_pred ----------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcC
Confidence 00112356678899999999999999999999999999863
No 282
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.2e-40 Score=326.68 Aligned_cols=253 Identities=20% Similarity=0.334 Sum_probs=202.9
Q ss_pred CCCeeeeeeecccCceEEEEEEEC----CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDT----LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 192 (495)
.++|++.+.||+|+||.||+|.+. .++..||+|.+.... .......+.+|+.+++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~ 80 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ--EQ 80 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec--CC
Confidence 468999999999999999999853 456789999987543 33445678899999999999999999999877 45
Q ss_pred eeEEEEeeccCChhhhhhC-C----------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC
Q 011041 193 SLYLVFKYMEHDLAGLAAS-P----------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE 255 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~-~----------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~ 255 (495)
..|+||||+.++.+..+.. . ...+++.++..++.||+.||.|||++||+||||||+|||++.+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence 7899999998754443331 1 2247889999999999999999999999999999999999999
Q ss_pred CcEEEeecccccccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 011041 256 GILTIADFGLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKI 333 (495)
Q Consensus 256 ~~vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i 333 (495)
+.+||+|||++........ .......++..|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+....+
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~ 239 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV 239 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999999976543221 11233345778999998876 468999999999999999998 99999887776665555
Q ss_pred HHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 334 FKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 334 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
.... . ......+++.+.+||..||+.||.+||++.+++++
T Consensus 240 ~~~~-~---------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 240 RKRQ-L---------------------------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HcCC-c---------------------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 3211 0 01123467788999999999999999999999874
No 283
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.2e-40 Score=320.84 Aligned_cols=245 Identities=22% Similarity=0.343 Sum_probs=195.9
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccC
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEH 203 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~ 203 (495)
+.||+|+||.||+|++..+++.||+|.+... ...+....+.+|+.+++.++||||+++++++.. ...+|+||||+.+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ--KQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC--CCCeEEEEeeccC
Confidence 3699999999999999999999999987643 344556778899999999999999999999877 4679999999987
Q ss_pred Chhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC-cccc
Q 011041 204 DLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM-TSRV 281 (495)
Q Consensus 204 ~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~-~~~~ 281 (495)
+.+..+. .....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........... ....
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 6555444 3445689999999999999999999999999999999999999999999999999876542211110 1112
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQ 360 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 360 (495)
.+..|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+.......+......
T Consensus 158 ~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~--------------------- 215 (252)
T cd05084 158 IPVKWTAPEALNY-GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRL--------------------- 215 (252)
T ss_pred CceeecCchhhcC-CCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCC---------------------
Confidence 2456999998865 458899999999999999997 89999876665544444321000
Q ss_pred ccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 361 SYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 361 ~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....++..+.+||.+||..||.+|||+.++++
T Consensus 216 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 216 -------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred -------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 011235678899999999999999999999985
No 284
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.5e-40 Score=321.88 Aligned_cols=250 Identities=20% Similarity=0.300 Sum_probs=200.5
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|.+++.||+|+||.||++.+.. +..||+|.+...... ...+.+|+.+++.++||||+++++++.. ...+|+
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 76 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTK--QRPIYI 76 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEcc--CCCcEE
Confidence 3579999999999999999998654 446999998754432 3457889999999999999999999876 456899
Q ss_pred EEeeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 197 VFKYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 197 v~e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
+|||+.++.+..+. .....+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++.........
T Consensus 77 v~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT 156 (256)
T ss_pred EEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCcee
Confidence 99999876554443 33447899999999999999999999999999999999999999999999999998765432211
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
......++..|++||++.+ ..++.++|||||||++|+|++ |..||...+..+....+......+
T Consensus 157 ~~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 221 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLY-SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLY-------------- 221 (256)
T ss_pred ecCCCccChhhCCHHHHhc-CcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCC--------------
Confidence 1122335677999998865 458899999999999999998 999998877766666554321100
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
.....+..+.+||.+||..||.+|||+.+++.+
T Consensus 222 --------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 222 --------------RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred --------------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 012246788999999999999999999999864
No 285
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.3e-40 Score=316.07 Aligned_cols=252 Identities=30% Similarity=0.492 Sum_probs=208.3
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+|.+.+.||+|++|.||++.+..++..|++|++..... .....+.+|+.+++.++|+||+++++++.. ....++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLK--KDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEec--CCeEEEEE
Confidence 58889999999999999999998999999999976543 355678899999999999999999999887 46799999
Q ss_pred eeccCChhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC
Q 011041 199 KYMEHDLAGLAASP-TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM 277 (495)
Q Consensus 199 e~~~~~l~~~~~~~-~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 277 (495)
||+++..+...... ...+++..+..++.||+.+|.|||++|++||||+|+||+++.++.++|+|||++........ .
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~ 154 (253)
T cd05122 77 EFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--R 154 (253)
T ss_pred ecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc--c
Confidence 99996655554433 35799999999999999999999999999999999999999999999999999987654321 3
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFK 357 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 357 (495)
....++..|++||.+.+ ..++.++|||||||++|+|++|.+||...+.......+... .....
T Consensus 155 ~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~-------------- 217 (253)
T cd05122 155 NTMVGTPYWMAPEVING-KPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN--GPPGL-------------- 217 (253)
T ss_pred cceecCCcccCHHHHcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc--CCCCc--------------
Confidence 45578899999998876 45788999999999999999999999887655544443221 00000
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCC
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEF 403 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~ 403 (495)
.....++..+.++|.+||..||.+|||+.++|+|||
T Consensus 218 ----------~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 218 ----------RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred ----------CcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 000113677899999999999999999999999998
No 286
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.9e-40 Score=327.02 Aligned_cols=251 Identities=21% Similarity=0.315 Sum_probs=202.4
Q ss_pred CCCeeeeeeecccCceEEEEEEEC-----CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDT-----LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
.++|.+.+.||+|+||.||++.+. .++..||+|.+... .......+.+|+.+++.++|+||+++++++.. .
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 79 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVE--G 79 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--C
Confidence 367999999999999999999853 35567999988643 24455678899999999999999999999876 5
Q ss_pred ceeEEEEeeccCChhhhhhCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcE
Q 011041 192 CSLYLVFKYMEHDLAGLAASP-------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGIL 258 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~-------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~v 258 (495)
..+|+||||+.++.+..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~ 159 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 159 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence 679999999987655443321 1248999999999999999999999999999999999999999999
Q ss_pred EEeecccccccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHh
Q 011041 259 TIADFGLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKL 336 (495)
Q Consensus 259 kL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~ 336 (495)
||+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+....+...
T Consensus 160 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~ 238 (288)
T cd05093 160 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG 238 (288)
T ss_pred EeccCCccccccCCceeecCCCCCccccccCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999976533221 11123345778999998875 568999999999999999998 99999888777766665431
Q ss_pred cCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 337 CGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
. . ......++.++.+||.+||+.||.+|||+.+++.
T Consensus 239 ~--~--------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 239 R--V--------------------------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred C--c--------------------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 1 0 0011246678999999999999999999999864
No 287
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.6e-40 Score=362.51 Aligned_cols=255 Identities=27% Similarity=0.366 Sum_probs=201.0
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|+++++||+|+||.||+|++..+|+.||||++..... .......+.+|+.+++.++||||+++++++.+ ....|+
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d--~~~lyL 79 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD--GDPVYY 79 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee--CCEEEE
Confidence 689999999999999999999999999999999975433 23445678899999999999999999999887 567999
Q ss_pred EEeeccCChhhhhhCC-----------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeeccc
Q 011041 197 VFKYMEHDLAGLAASP-----------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGL 265 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~-----------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~ 265 (495)
||||++++.+..+... ...++...+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+
T Consensus 80 VMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGL 159 (932)
T PRK13184 80 TMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGA 159 (932)
T ss_pred EEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCc
Confidence 9999998655443321 12356678889999999999999999999999999999999999999999999
Q ss_pred ccccCCCCC-----------------CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH
Q 011041 266 ASFFDPNHK-----------------QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVE 328 (495)
Q Consensus 266 a~~~~~~~~-----------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~ 328 (495)
+........ ......+||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+...
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g-~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG-VPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC-CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 986521100 01123579999999999876 568999999999999999999999998755433
Q ss_pred HHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 329 QLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 329 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
..... ....+.. ......+|+.+.+++.+||..||.+|++..+.|.+
T Consensus 239 i~~~~--~i~~P~~------------------------~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 239 ISYRD--VILSPIE------------------------VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred hhhhh--hccChhh------------------------ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 32211 0000000 01123577889999999999999999887666643
No 288
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3e-40 Score=324.70 Aligned_cols=253 Identities=16% Similarity=0.237 Sum_probs=199.6
Q ss_pred CCCeeeeeeecccCceEEEEEEEC-----CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDT-----LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
.++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.++|+||+++++++.. .
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~--~ 81 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ--G 81 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC--C
Confidence 468999999999999999999864 345789999986433 22334567899999999999999999999876 5
Q ss_pred ceeEEEEeeccCChhhhhhCC----------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEe
Q 011041 192 CSLYLVFKYMEHDLAGLAASP----------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIA 261 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~----------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~ 261 (495)
...++||||+.++.+..+... ...+++..+..++.||+.||.|||++|++||||||+|||++.++.++|+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~ 161 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 161 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEEC
Confidence 679999999987655544322 1235778899999999999999999999999999999999999999999
Q ss_pred ecccccccCCCCCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCC
Q 011041 262 DFGLASFFDPNHKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGS 339 (495)
Q Consensus 262 DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~ 339 (495)
|||++......... ......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+....
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~-- 238 (277)
T cd05062 162 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGG-- 238 (277)
T ss_pred CCCCccccCCcceeecCCCCccCHhhcChhHhhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC--
Confidence 99998755322111 1122345778999998875 568999999999999999998 789998887766555443211
Q ss_pred CChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 340 PSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
. .......++.+.+||.+||+.||.+|||+.+++++
T Consensus 239 ~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 239 L--------------------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred c--------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 00112356778999999999999999999999874
No 289
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.6e-40 Score=331.92 Aligned_cols=252 Identities=20% Similarity=0.311 Sum_probs=199.7
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeE----EEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQI----VALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~----vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 192 (495)
..+|++++.||+|+||.||+|++..+|.. ||+|++... ......+.+.+|+.+++.++||||+++++++...
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~--- 81 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS--- 81 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC---
Confidence 46899999999999999999998766654 899998643 2344556788999999999999999999998752
Q ss_pred eeEEEEeeccCChh-hhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 193 SLYLVFKYMEHDLA-GLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 193 ~~~lv~e~~~~~l~-~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
..++++||+.++.+ ..+......+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||++..+..
T Consensus 82 ~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 82 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccC
Confidence 47899999987644 44444455689999999999999999999999999999999999999999999999999987653
Q ss_pred CCCCC-CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 272 NHKQP-MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 272 ~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
..... .....++..|+|||++.+ ..++.++|||||||++|||++ |.+||.+....+.. .+......++
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~-------- 231 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLP-------- 231 (316)
T ss_pred CCcceeccCCccceeecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHhCCCCCC--------
Confidence 32211 122234678999998875 568999999999999999997 99999887655443 3322111100
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
....++.++.+||..||..||.+|||+.+++.+
T Consensus 232 -------------------~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 232 -------------------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred -------------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 012345678899999999999999999999985
No 290
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.2e-40 Score=327.81 Aligned_cols=256 Identities=26% Similarity=0.441 Sum_probs=209.7
Q ss_pred eeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEe
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFK 199 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e 199 (495)
|+...+||+|+||.||++.+..+|+.||||++.... ......+.+|+.+++.++|+||+++++++.. ....|+|||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e 97 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLV--GDELWVVME 97 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEe--CCEEEEEEe
Confidence 444578999999999999999999999999986432 3345678899999999999999999999987 568999999
Q ss_pred eccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcc
Q 011041 200 YMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTS 279 (495)
Q Consensus 200 ~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~ 279 (495)
|+.++.+..+... ..+++..+..++.||+.+|.|||++||+||||||+||+++.++.++|+|||++....... .....
T Consensus 98 ~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~ 175 (292)
T cd06657 98 FLEGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKS 175 (292)
T ss_pred cCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccc
Confidence 9998766665543 368999999999999999999999999999999999999999999999999987654322 12234
Q ss_pred ccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCC
Q 011041 280 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQ 359 (495)
Q Consensus 280 ~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 359 (495)
..|++.|++||.+.+ ..++.++|+|||||++|+|++|.+||.+.+..+....+.... +.
T Consensus 176 ~~~~~~y~~pE~~~~-~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~--~~------------------ 234 (292)
T cd06657 176 LVGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL--PP------------------ 234 (292)
T ss_pred cccCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC--Cc------------------
Confidence 568999999998765 567899999999999999999999998877665554442211 00
Q ss_pred cccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCC
Q 011041 360 QSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKP 408 (495)
Q Consensus 360 ~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~ 408 (495)
.......+++.+.++|.+||..||.+||++.++|.||||....
T Consensus 235 ------~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 235 ------KLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred ------ccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence 0011234677889999999999999999999999999998754
No 291
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.8e-40 Score=324.18 Aligned_cols=253 Identities=21% Similarity=0.313 Sum_probs=200.6
Q ss_pred CCCeeeeeeecccCceEEEEEEECC-----CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTL-----TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
.+.|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.++|+||+++++++.+ .
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 81 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFE--R 81 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc--C
Confidence 4679999999999999999999887 77899999886443 23344567889999999999999999998876 4
Q ss_pred ceeEEEEeeccCChhhhhhC-CC------CCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC---cEEEe
Q 011041 192 CSLYLVFKYMEHDLAGLAAS-PT------IKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG---ILTIA 261 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~-~~------~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~---~vkL~ 261 (495)
...|+||||+.++.+..+.. .. ..+++..+..++.||+.||.|||++|++||||||+|||++.++ .+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 56899999998755544332 21 2589999999999999999999999999999999999998765 59999
Q ss_pred ecccccccCCCCCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCC
Q 011041 262 DFGLASFFDPNHKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGS 339 (495)
Q Consensus 262 DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~ 339 (495)
|||++......... .......+..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+.... .
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~ 239 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG-R 239 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-c
Confidence 99999865322110 1112233567999999875 468999999999999999997 999999887766655443210 0
Q ss_pred CChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 340 PSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
+ .....++..+.+||.+||..||++|||+.++|+|
T Consensus 240 ~---------------------------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 240 L---------------------------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred C---------------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0 0123467788999999999999999999999986
No 292
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.9e-40 Score=320.32 Aligned_cols=244 Identities=21% Similarity=0.297 Sum_probs=198.6
Q ss_pred eecccCceEEEEEEE--CCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeecc
Q 011041 125 KIGQGTYSNVYKARD--TLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYME 202 (495)
Q Consensus 125 ~LG~G~~g~Vy~a~~--~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~ 202 (495)
.||+|+||.||+|.+ ..++..||+|++..........+.+.+|+.+++.++|+||+++++++.. ...++||||+.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA---ESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---CCcEEEEecCC
Confidence 589999999999964 4678899999987665555566788899999999999999999998754 35799999999
Q ss_pred CChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC--CCccc
Q 011041 203 HDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ--PMTSR 280 (495)
Q Consensus 203 ~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~--~~~~~ 280 (495)
++.+..+......+++..+..++.||+.||.|||++||+||||||.|||++.++.+||+|||++......... .....
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05116 79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHG 158 (257)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCC
Confidence 7766555555567999999999999999999999999999999999999999999999999999866433211 11222
Q ss_pred cccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCC
Q 011041 281 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQ 359 (495)
Q Consensus 281 ~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 359 (495)
.+++.|+|||.+.. ..++.++|||||||++|||++ |.+||.+.+..+....+.+... +
T Consensus 159 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~-~------------------- 217 (257)
T cd05116 159 KWPVKWYAPECMNY-YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER-M------------------- 217 (257)
T ss_pred CCCccccCHhHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC-C-------------------
Confidence 34578999998764 568889999999999999998 9999988777766665532110 0
Q ss_pred cccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 360 QSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 360 ~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....+++++.+||..||+.||.+||++.++..
T Consensus 218 --------~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 218 --------ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred --------CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 112346788999999999999999999999865
No 293
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=7.3e-40 Score=319.01 Aligned_cols=249 Identities=22% Similarity=0.334 Sum_probs=200.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|++.+.||+|+||.||+|.+. ++..||+|.+...... ...+.+|+.++++++|+||+++++++.. ....|+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 78 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMD---PKDFLAEAQIMKKLRHPKLIQLYAVCTL--EEPIYI 78 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCccc---HHHHHHHHHHHHHCCCCCccceeEEEec--CCCeee
Confidence 367999999999999999999865 4568999998754432 3457789999999999999999999877 567899
Q ss_pred EEeeccCChhhhhh-CC-CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEHDLAGLAA-SP-TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~~l~~~~~-~~-~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
+|||+.++.+..+. .. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 99999665444443 32 34689999999999999999999999999999999999999999999999999987653221
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
........+..|+|||++.+ ..++.++|||||||++|+|++ |++||.+.+....+..+......
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-------------- 223 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALY-NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRM-------------- 223 (261)
T ss_pred cccCCCcCceeccCcccccc-CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC--------------
Confidence 11112223457999998865 568899999999999999999 99999988777666655331100
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....++..+.+||.+||+.||.+||++.++++
T Consensus 224 --------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 224 --------------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred --------------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 011245678899999999999999999999975
No 294
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=4.3e-40 Score=327.04 Aligned_cols=260 Identities=23% Similarity=0.359 Sum_probs=207.5
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCcee
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~ 194 (495)
..++|++.+.||+|+||.||+|.+..+++.||||.+....... ....+.+|+.++..+ +|+||+++++++.+ ...+
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~ 89 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVKCYGYFIT--DSDV 89 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH-HHHHHHHHHHHHHhccCCCchHhhheeeec--CCeE
Confidence 4588999999999999999999999999999999997654332 334455677766666 59999999999987 5679
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH 273 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~ 273 (495)
|++|||+.+.+..+.......+++..+..++.||+.||.|||+ +||+||||+|+||+++.++.+||+|||++..+....
T Consensus 90 ~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 90 FICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred EEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 9999999887766665545579999999999999999999997 699999999999999999999999999987654322
Q ss_pred CCCCccccccCCCCCcccccCC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCChhhhhhCC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGA---TDYGVGVDLWSAGCILAELLAEKPIMPGRTE-VEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~---~~~~~~~DvwSlGvil~elltG~~pf~~~~~-~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
......+++.|+|||.+.+. ..++.++|||||||++|+|++|+.||..... .+.+..+.... .. .+
T Consensus 170 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~--~~---- 239 (296)
T cd06618 170 --AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE--PP--SL---- 239 (296)
T ss_pred --cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC--CC--CC----
Confidence 12334578899999998653 2478899999999999999999999976332 33344332211 00 00
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.....++.++.+||.+||..||.+|||+.++++|+||..
T Consensus 240 ------------------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 240 ------------------PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred ------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence 001146678899999999999999999999999999985
No 295
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.7e-40 Score=321.01 Aligned_cols=248 Identities=23% Similarity=0.326 Sum_probs=199.6
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|++.++||+|+||.||+|++..++ .||+|++...... ...+.+|+.+++.++|+||+++++++.. ...|+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~l 77 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIYI 77 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEECC---CCcEE
Confidence 367999999999999999999887654 5999998754332 2467889999999999999999988753 45799
Q ss_pred EEeeccCChhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEHDLAGLAAS--PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~~l~~~~~~--~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
||||+.++.+..+.. ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 999998755444433 234589999999999999999999999999999999999999999999999999987654332
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
.......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+......
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~-------------- 222 (262)
T cd05071 158 TARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-------------- 222 (262)
T ss_pred ccccCCcccceecCHhHhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCC--------------
Confidence 22223456778999998765 568999999999999999999 89999887776666555321100
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....++..+.+||.+||+.||.+|||+.++++
T Consensus 223 --------------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 223 --------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred --------------CCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 011346778899999999999999999999875
No 296
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=6.4e-40 Score=320.31 Aligned_cols=253 Identities=21% Similarity=0.342 Sum_probs=204.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECCC---CeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLT---GQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
.++|++.+.||+|+||.||+|++..+ ...||+|++.... .......+.+|+.+++.++||||+++++++.. ...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 79 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK--SRP 79 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEec--CCc
Confidence 36799999999999999999988654 4579999886543 34445678889999999999999999999876 567
Q ss_pred eEEEEeeccCChhhhh-hCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 194 LYLVFKYMEHDLAGLA-ASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~-~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.|++|||+.++.+..+ ......+++..+..++.||+.||.|||++||+||||||+||||+.++.++|+|||++..+...
T Consensus 80 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 80 VMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred eEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 8999999987655544 344457999999999999999999999999999999999999999999999999999877522
Q ss_pred CCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 273 HKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 273 ~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
... ......+++.|+|||.+.+ ..++.++|||||||++|+|++ |..||...+..+....+......+
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---------- 228 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLP---------- 228 (266)
T ss_pred ccceeccCCCCCccccChhhhcc-CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC----------
Confidence 111 1112234678999998865 568899999999999999998 999998877666665553311000
Q ss_pred CCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 351 PHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
...+.++.+.+|+..||+.||.+||++.+++++
T Consensus 229 ------------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 229 ------------------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 112457788999999999999999999999874
No 297
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.9e-40 Score=327.01 Aligned_cols=253 Identities=22% Similarity=0.303 Sum_probs=203.5
Q ss_pred CCCeeeeeeecccCceEEEEEEECC-----CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTL-----TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
..+|++.+.||+|+||.||+|.+.. .+..||||++.... .......+.+|+.++..++||||+++++++.. .
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~--~ 80 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK--E 80 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--C
Confidence 4578899999999999999998754 35789999987543 33445678899999999999999999999887 4
Q ss_pred ceeEEEEeeccCChhhhhhC----------------CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC
Q 011041 192 CSLYLVFKYMEHDLAGLAAS----------------PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE 255 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~----------------~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~ 255 (495)
...++++||+.++.+..+.. ....+++..+..++.||+.||.|||++||+||||||+|||++++
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK 160 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence 56899999998765443321 12358889999999999999999999999999999999999999
Q ss_pred CcEEEeecccccccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 011041 256 GILTIADFGLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKI 333 (495)
Q Consensus 256 ~~vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i 333 (495)
+.+||+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+....+
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI 239 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999999876533221 11223455788999999875 458899999999999999998 89999988877776666
Q ss_pred HHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 334 FKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 334 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
...... ....+++..+.+|+..||+.||.+||++.++++.
T Consensus 240 ~~~~~~----------------------------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 240 RNRQVL----------------------------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HcCCcC----------------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 432110 1123567788999999999999999999999863
No 298
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3e-40 Score=329.64 Aligned_cols=252 Identities=24% Similarity=0.307 Sum_probs=198.1
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeE--EEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCc
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQI--VALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~--vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 192 (495)
..++|++.+.||+|+||.||+|.++.++.. +++|.+... ........+.+|+.++.++ +|+||+++++++.. ..
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~--~~ 81 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--RG 81 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC--CC
Confidence 457899999999999999999999887765 466665432 2345556788999999999 89999999999877 56
Q ss_pred eeEEEEeeccCChhhhhhC-C---------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC
Q 011041 193 SLYLVFKYMEHDLAGLAAS-P---------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG 256 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~-~---------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~ 256 (495)
.+|+||||+.++.+..+.. . ...+++..+..++.||+.||+|||++||+||||||+||||+.++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 161 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence 7999999998654443332 1 23588999999999999999999999999999999999999999
Q ss_pred cEEEeecccccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 011041 257 ILTIADFGLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFK 335 (495)
Q Consensus 257 ~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~ 335 (495)
.+||+|||++....... ......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+..
T Consensus 162 ~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~ 238 (303)
T cd05088 162 VAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 238 (303)
T ss_pred cEEeCccccCcccchhh--hcccCCCcccccCHHHHhc-cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhc
Confidence 99999999986432111 1111233567999998765 568899999999999999998 9999988776655544321
Q ss_pred hcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 336 LCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
.. . ......+++++.+||.+||..||.+||++.++|++
T Consensus 239 ~~---~-------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 239 GY---R-------------------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred CC---c-------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00 0 00112356788999999999999999999999974
No 299
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.4e-40 Score=319.83 Aligned_cols=249 Identities=19% Similarity=0.287 Sum_probs=199.6
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
.+|++.+.||+|+||.||++.+. ++..+|+|++...... ...+.+|+.+++.++|+||+++++++.. ....|+|
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv 77 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTK--QRPIFIV 77 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcC--CCceEEE
Confidence 46889999999999999999876 4668999998754332 2356789999999999999999999876 4678999
Q ss_pred EeeccCChhh-hhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 198 FKYMEHDLAG-LAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 198 ~e~~~~~l~~-~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
|||++++.+. .+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~ 157 (256)
T cd05059 78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS 157 (256)
T ss_pred EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccc
Confidence 9999876444 443434578999999999999999999999999999999999999999999999999987654322111
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
.....++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+......
T Consensus 158 ~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---------------- 220 (256)
T cd05059 158 SQGTKFPVKWAPPEVFDY-SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL---------------- 220 (256)
T ss_pred cCCCCCCccccCHHHhcc-CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcC----------------
Confidence 112233457999998875 568999999999999999998 89999887776666554321100
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
......|.++.+|+.+||..+|.+|||+.++++.
T Consensus 221 ------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 221 ------------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred ------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 1112367789999999999999999999999973
No 300
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=5.1e-40 Score=319.92 Aligned_cols=248 Identities=23% Similarity=0.349 Sum_probs=199.9
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|++++.||+|+||.||+|.+. .+..||+|.+...... ...+.+|+.+++.++|+||+++++++.. ...|+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~l 77 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVSE---EPIYI 77 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEECC---CCcEE
Confidence 367999999999999999999866 5567999998765443 2457899999999999999999998753 45899
Q ss_pred EEeeccCChhhhhh-C-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEHDLAGLAA-S-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~~l~~~~~-~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
+|||+.++.+..+. . ....+++..+..++.||+.||.|||++||+||||||+|||+++++.++|+|||++..+.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05070 78 VTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence 99999875554443 2 234589999999999999999999999999999999999999999999999999987643322
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
.......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+..... +
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~------------- 222 (260)
T cd05070 158 TARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR-M------------- 222 (260)
T ss_pred ccccCCCCCccccChHHHhc-CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-C-------------
Confidence 22223345678999998765 568899999999999999999 9999998877776665532110 0
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
....+.+..+.+||.+||..||.+|||+.+++.
T Consensus 223 --------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 223 --------------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred --------------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 112346778999999999999999999999874
No 301
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=8e-40 Score=317.09 Aligned_cols=246 Identities=25% Similarity=0.379 Sum_probs=203.3
Q ss_pred eeecccCceEEEEEEECCC---CeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEee
Q 011041 124 DKIGQGTYSNVYKARDTLT---GQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKY 200 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~ 200 (495)
+.||+|+||.||+|.+... +..|++|++....... ....+.+|+.+++.++|+||+++++++.. ...++++|||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTE--EEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecC--CCceEEEEEe
Confidence 3699999999999998866 8899999997654333 46788899999999999999999999987 6789999999
Q ss_pred ccCChhhhhhCC---------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 201 MEHDLAGLAASP---------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 201 ~~~~l~~~~~~~---------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
+.++.+...... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 966555444433 36799999999999999999999999999999999999999999999999999987654
Q ss_pred CCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 272 NHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 272 ~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
... .......+++.|+|||.+.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+... .
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~--~---------- 224 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKD-GIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG--Y---------- 224 (262)
T ss_pred ccccccccCCCcCccccCHHHhcc-CCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC--C----------
Confidence 321 11234457889999998876 468999999999999999999 69999988776666655431 0
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
.......+|+++.++|.+||..||.+|||+.+++++
T Consensus 225 ----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 225 ----------------RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred ----------------CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 001123457889999999999999999999999975
No 302
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=4.1e-40 Score=321.46 Aligned_cols=252 Identities=30% Similarity=0.455 Sum_probs=202.6
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++.+.||+|+||.||+|++..+|..||||.+..... .......+.+|+.+++.++|+||+++++++.. ....++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~ 79 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE--DNELNI 79 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe--CCeEEE
Confidence 578999999999999999999999999999998875433 34455678899999999999999999999887 567999
Q ss_pred EEeeccCChhhhhhC----CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 197 VFKYMEHDLAGLAAS----PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 197 v~e~~~~~l~~~~~~----~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
+|||+.++.+..+.. ....+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++..+...
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd08229 80 VLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence 999999765444322 3456899999999999999999999999999999999999999999999999998766433
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHhcCCCChhhhhhCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEV--EQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~--~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
. .......++..|+|||.+.+ ..++.++|||||||++|+|++|..||.+.... +....+... ..++
T Consensus 160 ~-~~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~--------- 227 (267)
T cd08229 160 T-TAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-DYPP--------- 227 (267)
T ss_pred C-cccccccCCcCccCHHHhcC-CCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC-CCCC---------
Confidence 2 22234578999999998865 45788999999999999999999999765432 222222110 0000
Q ss_pred CCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 351 PHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....+++.+.+||.+||..||.+|||+.++++
T Consensus 228 -----------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 228 -----------------LPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred -----------------CCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 011246678999999999999999999998875
No 303
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.2e-40 Score=325.57 Aligned_cols=253 Identities=23% Similarity=0.350 Sum_probs=202.3
Q ss_pred CCCeeeeeeecccCceEEEEEEECCC-----CeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLT-----GQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRM 190 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~-----g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~ 190 (495)
.++|++.+.||+|+||.||++.+... ...||+|.+.... .......+.+|+.+++.+ +|+||+++++++..
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 87 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ-- 87 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC--
Confidence 46899999999999999999987644 3789999987543 334456688999999999 89999999999876
Q ss_pred CceeEEEEeeccCChhhhhh----------------CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC
Q 011041 191 SCSLYLVFKYMEHDLAGLAA----------------SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN 254 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~----------------~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~ 254 (495)
...+|++|||+.++.+..+. .....+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTE 167 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcC
Confidence 56799999999876554433 22446899999999999999999999999999999999999999
Q ss_pred CCcEEEeecccccccCCCCCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 011041 255 EGILTIADFGLASFFDPNHKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHK 332 (495)
Q Consensus 255 ~~~vkL~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~ 332 (495)
++.+||+|||++..+...... ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 246 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL 246 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhcc-CCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHH
Confidence 999999999999866432211 1122234677999998765 568899999999999999997 9999988776666554
Q ss_pred HHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 333 IFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 333 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
+..... ......++..+.+||.+||..||.+|||+.+++++
T Consensus 247 ~~~~~~----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 247 LKEGYR----------------------------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHcCCc----------------------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 432110 00112356788999999999999999999999974
No 304
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=6.4e-40 Score=326.08 Aligned_cols=250 Identities=22% Similarity=0.260 Sum_probs=197.6
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCe--EEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCcee
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQ--IVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~--~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~ 194 (495)
++|++.+.||+|+||.||+|++..++. .+++|.+... ......+.+.+|+.++.++ +||||+++++++.. ...+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~--~~~~ 78 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF-ASENDHRDFAGELEVLCKLGHHPNIINLLGACEN--RGYL 78 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc-CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc--CCcc
Confidence 579999999999999999999887765 4688877632 2334456788999999999 79999999999876 4579
Q ss_pred EEEEeeccCChhhhhhCC----------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcE
Q 011041 195 YLVFKYMEHDLAGLAASP----------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGIL 258 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~----------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~v 258 (495)
|++|||+.++.+..+... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeE
Confidence 999999986544433321 1258899999999999999999999999999999999999999999
Q ss_pred EEeecccccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhc
Q 011041 259 TIADFGLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLC 337 (495)
Q Consensus 259 kL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~ 337 (495)
||+|||++....... .......+..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+.+.++....
T Consensus 159 kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~ 235 (297)
T cd05089 159 KIADFGLSRGEEVYV--KKTMGRLPVRWMAIESLNY-SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 235 (297)
T ss_pred EECCcCCCcccccee--ccCCCCcCccccCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC
Confidence 999999986432111 1111123457999998865 568999999999999999997 999999887766665543211
Q ss_pred CCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 338 GSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
. ......++.++.+||.+||..||.+|||++++++.
T Consensus 236 ~----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 236 R----------------------------MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred C----------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 01113467789999999999999999999999763
No 305
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=5.8e-40 Score=325.51 Aligned_cols=259 Identities=19% Similarity=0.280 Sum_probs=204.0
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCC----------------eEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCee
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTG----------------QIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVV 180 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g----------------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv 180 (495)
.++|++++.||+|+||.||+|.+..++ ..||+|.+.... .......+.+|+.+++.++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence 468999999999999999999876544 568999987543 335567788999999999999999
Q ss_pred eeeceeeccCCceeEEEEeeccCChhhhhhCCCC-----------CCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCC
Q 011041 181 KLEGLVTSRMSCSLYLVFKYMEHDLAGLAASPTI-----------KFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSN 249 (495)
Q Consensus 181 ~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~-----------~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~N 249 (495)
++++++.. +...+++|||+.++.+..+..... .+++..+..++.||+.||.|||++||+||||||+|
T Consensus 83 ~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N 160 (296)
T cd05051 83 RLLGVCTV--DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN 160 (296)
T ss_pred EEEEEEec--CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence 99999877 467999999998765554433322 68999999999999999999999999999999999
Q ss_pred eeeCCCCcEEEeecccccccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCh
Q 011041 250 LLIDNEGILTIADFGLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA--EKPIMPGRTE 326 (495)
Q Consensus 250 ILl~~~~~vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt--G~~pf~~~~~ 326 (495)
||++.++.++|+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|+|++ |..||...+.
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc-CCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 9999999999999999876533221 11223456788999998875 468999999999999999998 7788887776
Q ss_pred HHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 327 VEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 327 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.+.+..+.......... ........+|.++.+||.+||+.||.+|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 240 QQVIENAGHFFRDDGRQ---------------------IYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred HHHHHHHHhcccccccc---------------------ccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 66665554321111000 000112345678999999999999999999999975
No 306
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=5.7e-40 Score=324.61 Aligned_cols=264 Identities=25% Similarity=0.385 Sum_probs=206.6
Q ss_pred CeeeeeeecccCceEEEEEEEC---CCCeEEEeEEEecCCC--ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCc
Q 011041 119 TFEKLDKIGQGTYSNVYKARDT---LTGQIVALKKVRFDNL--EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~---~~g~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 192 (495)
+|++.+.||+|+||.||++++. .++..||||++.+... .......+.+|+.++.++ +|+||+++++.+.. ..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~--~~ 78 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT--DT 78 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec--CC
Confidence 4889999999999999999864 4678999999875432 223345678899999999 69999999998876 56
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.+|+||||+.++.+.........+++..++.++.||+.+|.|||+.|++||||||.|||++.++.++|+|||++..+...
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 79 KLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 79999999998666555555567999999999999999999999999999999999999999999999999998765443
Q ss_pred CCCCCccccccCCCCCcccccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGAT-DYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
.........|+..|++||.+.+.. .++.++||||||+++|+|++|..||...+.......+.+.....
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~----------- 227 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS----------- 227 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc-----------
Confidence 322223456899999999886532 36789999999999999999999997543222212221110000
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC---HHHHHhCCCCCCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT---ATAALRSEFFTTKPY 409 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t---a~elL~hp~f~~~~~ 409 (495)
.......+++.+.+||.+||+.||++||| +.++|+||||+...|
T Consensus 228 --------------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 228 --------------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred --------------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence 00112346778899999999999999998 577899999988655
No 307
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=5.3e-40 Score=324.51 Aligned_cols=258 Identities=29% Similarity=0.511 Sum_probs=212.9
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.+.|++.+.||+|+||.||++.+..++..|++|++..... ....+.+|+.+++.++|+||+++++++.. ....|+
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~l 92 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLV--GDELWV 92 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEE--CCEEEE
Confidence 4679999999999999999999998999999999975432 45667889999999999999999999887 468999
Q ss_pred EEeeccCChhhhhhCCCC-CCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTI-KFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~-~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
++||++++.+..+..... .+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .
T Consensus 93 v~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-~ 171 (286)
T cd06614 93 VMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-S 171 (286)
T ss_pred EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch-h
Confidence 999999655555444333 79999999999999999999999999999999999999999999999999987654322 1
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
......++..|++||++.+ ..++.++|+|||||++|+|++|..||...+.......+.... .+.
T Consensus 172 ~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~-------------- 235 (286)
T cd06614 172 KRNSVVGTPYWMAPEVIKR-KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKG-IPP-------------- 235 (286)
T ss_pred hhccccCCcccCCHhHhcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-CCC--------------
Confidence 2233457889999998875 468899999999999999999999998877665555443210 000
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
......++..+.+||.+||+.||.+|||+.++|.|+||+..
T Consensus 236 -----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 236 -----------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred -----------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 01112366788999999999999999999999999999974
No 308
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.1e-40 Score=320.39 Aligned_cols=249 Identities=20% Similarity=0.301 Sum_probs=204.8
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
..+|++++.||.|+||.||+|++.. +..+|+|++.... ......+.+|+.+++.++|+||+++++++.+ ....|+
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~l 79 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSV--GEPVYI 79 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEec--CCCeEE
Confidence 4679999999999999999999887 8899999987543 2234568899999999999999999999877 467899
Q ss_pred EEeeccCChhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEHDLAGLAAS--PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~~l~~~~~~--~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
||||+.++.+..+.. ....+++..+..++.||+.||.|||++||+|+||||+||||+.++.+||+|||++........
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 80 ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred EEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 999998755544433 344689999999999999999999999999999999999999999999999999976643221
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
......++..|++||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.+..+......
T Consensus 160 -~~~~~~~~~~~~~PE~~~~-~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-------------- 223 (261)
T cd05148 160 -LSSDKKIPYKWTAPEAASH-GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM-------------- 223 (261)
T ss_pred -cccCCCCceEecCHHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC--------------
Confidence 1223345678999998865 568899999999999999998 89999988877777666432110
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....+++++.++|.+||+.||.+|||+.++++
T Consensus 224 --------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 224 --------------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred --------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 011346778999999999999999999999985
No 309
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.3e-39 Score=319.79 Aligned_cols=252 Identities=18% Similarity=0.262 Sum_probs=201.5
Q ss_pred CCCeeeeeeecccCceEEEEEEECCC-----CeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLT-----GQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~-----g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
.++|++.+.||+|+||.||+|.++.. +..||+|.+.... .......+.+|+.+|+.++|+||+++++++.. .
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~ 81 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVST--G 81 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC--C
Confidence 47899999999999999999987644 4889999986443 23344567789999999999999999999887 4
Q ss_pred ceeEEEEeeccCChhhhhhCC----------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEe
Q 011041 192 CSLYLVFKYMEHDLAGLAASP----------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIA 261 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~----------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~ 261 (495)
...|+||||+.++.+..+... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEEC
Confidence 679999999986555443321 2247888999999999999999999999999999999999999999999
Q ss_pred ecccccccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCC
Q 011041 262 DFGLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGS 339 (495)
Q Consensus 262 DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~ 339 (495)
|||++........ .......++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||.+.+..+.+..+... ..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~ 239 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDG-GH 239 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhc-CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcC-CC
Confidence 9999876543221 12233456788999998865 458899999999999999998 99999887776665544311 00
Q ss_pred CChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 340 PSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
+ .....++.++.+||.+||+.||.+|||+.+++.
T Consensus 240 ~---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 240 L---------------------------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred C---------------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0 011234678899999999999999999999986
No 310
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.9e-39 Score=315.79 Aligned_cols=249 Identities=22% Similarity=0.338 Sum_probs=202.9
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|.+.+.||+|+||.||+|.+. .+..||||.+...... ...+.+|+.+++.++|+||+++++++.. ....++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~ 78 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCSE--EEPIYI 78 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeeec--CCceEE
Confidence 578999999999999999999876 4577999998755432 3567889999999999999999999876 467999
Q ss_pred EEeeccCChhhhhh-CC-CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEHDLAGLAA-SP-TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~~l~~~~~-~~-~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
+|||+.++.+..+. .. ...+++..+..++.||+.||.|||++||+|+||||+||+|+.++.+||+|||++..+.....
T Consensus 79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 99999876554443 32 24689999999999999999999999999999999999999999999999999987643221
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
.......++..|+|||.+.+ ..++.++|||||||++|+|++ |+.||.+.+....+.++......+
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~------------- 224 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANY-GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMP------------- 224 (261)
T ss_pred hhhhccCCCccccCHHHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-------------
Confidence 11222334678999998875 568999999999999999998 999999888777777664321110
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
....++.++.++|.+||..||.+||++.++++
T Consensus 225 ---------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 225 ---------------RPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred ---------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 11234678899999999999999999999875
No 311
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-40 Score=312.50 Aligned_cols=262 Identities=22% Similarity=0.383 Sum_probs=219.8
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCce
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~ 193 (495)
..++|.+++.||+|+|+.|.+++.+.|.+.||+|+++++-. +.+.+..++.|-.+..+- +||.+|-|+.+|.. ...
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt--esr 325 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT--ESR 325 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc--cce
Confidence 46899999999999999999999999999999999988755 455667788888888876 79999999999987 568
Q ss_pred eEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 011041 194 LYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH 273 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~ 273 (495)
+++|.||+.|+.+-...++..+++|++++.|-..|+.||.|||+.|||+||||.+|+|||..|++||+|+|+++.--. .
T Consensus 326 lffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~-~ 404 (593)
T KOG0695|consen 326 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG-P 404 (593)
T ss_pred EEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCC-C
Confidence 999999999987777777778999999999999999999999999999999999999999999999999999875322 2
Q ss_pred CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-------CChHH-HHHHHHHhcCCCChhhh
Q 011041 274 KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPG-------RTEVE-QLHKIFKLCGSPSEEYW 345 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~-------~~~~~-~~~~i~~~~g~~~~~~~ 345 (495)
....++.+|||.|+|||++.| ..|+..+|+|+|||++|||+.|+.||.- .+.++ .++-|+..
T Consensus 405 gd~tstfcgtpnyiapeilrg-eeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek--------- 474 (593)
T KOG0695|consen 405 GDTTSTFCGTPNYIAPEILRG-EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK--------- 474 (593)
T ss_pred CcccccccCCCcccchhhhcc-cccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh---------
Confidence 234567899999999999887 6799999999999999999999999962 12222 22223221
Q ss_pred hhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC------HHHHHhCCCCCCCCCC
Q 011041 346 KKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT------ATAALRSEFFTTKPYA 410 (495)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t------a~elL~hp~f~~~~~~ 410 (495)
-..+...+|-.+..+++..|.+||.+|.. ..++-.|+||....|.
T Consensus 475 --------------------qiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd 525 (593)
T KOG0695|consen 475 --------------------QIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWD 525 (593)
T ss_pred --------------------cccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHH
Confidence 11223345666778999999999999954 6899999999987774
No 312
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.9e-39 Score=315.07 Aligned_cols=252 Identities=30% Similarity=0.467 Sum_probs=202.6
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
++|++.+.||+|+||.||+|.+..+|+.||+|.++.... .......+.+|+.++++++|+||+++++++.. ....++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~--~~~~~l 79 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE--NNELNI 79 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec--CCeEEE
Confidence 579999999999999999999999999999999875433 34446778899999999999999999999987 567899
Q ss_pred EEeeccCChhhhhh----CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 197 VFKYMEHDLAGLAA----SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 197 v~e~~~~~l~~~~~----~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
||||+.++.+..+. .....+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~ 159 (267)
T cd08224 80 VLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCC
Confidence 99999875444332 23456899999999999999999999999999999999999999999999999998765433
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCChhhhhhCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTE--VEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~--~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
. .......+++.|+|||.+.+ ..++.++|||||||++|+|++|..||..... .+....+.... ..
T Consensus 160 ~-~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~--------- 226 (267)
T cd08224 160 T-TAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCD--YP--------- 226 (267)
T ss_pred C-cccceecCCccccCHHHhcc-CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCC--CC---------
Confidence 2 22234568899999998875 5688999999999999999999999965432 12222221100 00
Q ss_pred CCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 351 PHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
+ .....++..+.++|.+||..||.+|||+.++++
T Consensus 227 -------~---------~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 227 -------P---------LPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred -------C---------CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0 001245678899999999999999999999885
No 313
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=3.9e-41 Score=334.89 Aligned_cols=280 Identities=30% Similarity=0.512 Sum_probs=227.0
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC------CCCeeeeeceeeccC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLD------HPNVVKLEGLVTSRM 190 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~------HpnIv~l~~~~~~~~ 190 (495)
.++|.+....|+|-|++|..|.|..-|..||||+|+.... -...=..|++||++|+ --|+++|+..|..
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~---M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h-- 505 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV---MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH-- 505 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH---HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh--
Confidence 4789999999999999999999999999999999986542 2233457999999994 3478999888877
Q ss_pred CceeEEEEeeccCChhhhhhC--CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC-CcEEEeeccccc
Q 011041 191 SCSLYLVFKYMEHDLAGLAAS--PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE-GILTIADFGLAS 267 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~--~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~-~~vkL~DFG~a~ 267 (495)
.+++|||||.+.-.|...+.. .+..|....++.|+.||+.||..|-.+||+|.||||+||||++. ..+||||||.|.
T Consensus 506 knHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 506 KNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSAS 585 (752)
T ss_pred cceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccc
Confidence 578999999998887776654 34457889999999999999999999999999999999999985 578999999998
Q ss_pred ccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhh
Q 011041 268 FFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKK 347 (495)
Q Consensus 268 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 347 (495)
....+. .+.+..+..|+|||+++| ..|+...|+||+||+||||.||+-+|+|.++...+.-.+.+.|.++..+..+
T Consensus 586 ~~~ene---itPYLVSRFYRaPEIiLG-~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRK 661 (752)
T KOG0670|consen 586 FASENE---ITPYLVSRFYRAPEIILG-LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRK 661 (752)
T ss_pred cccccc---ccHHHHHHhccCcceeec-CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhh
Confidence 876543 466778889999999998 5799999999999999999999999999999999999999999998876654
Q ss_pred CCCCCC-----c--------------------cCCCCcccccccccccCCCC-------CCcHHHHHHhccCCCCCccCH
Q 011041 348 SKLPHA-----T--------------------IFKPQQSYKRCIAETFKDFP-------PSSLPLIETLLAIDPAERQTA 395 (495)
Q Consensus 348 ~~~~~~-----~--------------------~~~~~~~~~~~~~~~~~~~s-------~~~~~Li~~~L~~dP~~R~ta 395 (495)
..+-.. - +.+|...+..-+.. ...+| ..+.+||.+||..||++|.|.
T Consensus 662 gqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~-~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~ 740 (752)
T KOG0670|consen 662 GQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIA-VQRLPDEQPKIVQQLRDLLDKMLILDPEKRITV 740 (752)
T ss_pred cchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhc-cCCCCchhHHHHHHHHHHHHHHhccChhhcCCH
Confidence 332111 0 11111111111110 01122 357899999999999999999
Q ss_pred HHHHhCCCCCC
Q 011041 396 TAALRSEFFTT 406 (495)
Q Consensus 396 ~elL~hp~f~~ 406 (495)
.|+|+||||+.
T Consensus 741 nqAL~HpFi~~ 751 (752)
T KOG0670|consen 741 NQALKHPFITE 751 (752)
T ss_pred HHHhcCCcccC
Confidence 99999999975
No 314
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.7e-39 Score=319.69 Aligned_cols=251 Identities=20% Similarity=0.284 Sum_probs=199.8
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCe----EEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQ----IVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~----~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 192 (495)
.++|++++.||+|+||+||+|++..+|. .||+|++.... .......+.+|+.+++.++|+||+++++++.. .
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---~ 81 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLT---S 81 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC---C
Confidence 4789999999999999999999877776 48999986543 34445678899999999999999999998865 3
Q ss_pred eeEEEEeeccCCh-hhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 193 SLYLVFKYMEHDL-AGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 193 ~~~lv~e~~~~~l-~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
..+++|||+.++. ...+......+++..+..++.||+.||.|||++||+||||||+|||+++++.+||+|||++.....
T Consensus 82 ~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 82 TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 4789999998654 444444455799999999999999999999999999999999999999999999999999987643
Q ss_pred CCCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 272 NHKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 272 ~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
.... ......+++.|+|||.+.+ ..++.++|||||||++|||++ |.+||...........+.. ...+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~--------- 230 (279)
T cd05109 162 DETEYHADGGKVPIKWMALESILH-RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK-GERL--------- 230 (279)
T ss_pred ccceeecCCCccchhhCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCcC---------
Confidence 2211 1122234678999998865 468999999999999999998 9999987665554433321 1110
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....++.++.++|..||..||.+||++.+++.
T Consensus 231 ------------------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 231 ------------------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred ------------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 011235677889999999999999999999995
No 315
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.3e-39 Score=322.74 Aligned_cols=251 Identities=21% Similarity=0.303 Sum_probs=200.8
Q ss_pred CCCeeeeeeecccCceEEEEEEEC-----CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDT-----LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
..+|.+.+.||+|+||.||+|.+. .++..+++|.+.... ......+.+|+.+++.++|+||+++++++.. .
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 79 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGD--G 79 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEcc--C
Confidence 457999999999999999999854 345678999876432 3344668899999999999999999999976 5
Q ss_pred ceeEEEEeeccCChhhhhhCC----------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC
Q 011041 192 CSLYLVFKYMEHDLAGLAASP----------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE 255 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~----------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~ 255 (495)
...++||||+.++.+..+... ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN 159 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence 679999999987655544321 2358999999999999999999999999999999999999999
Q ss_pred CcEEEeecccccccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 011041 256 GILTIADFGLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKI 333 (495)
Q Consensus 256 ~~vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i 333 (495)
+.+||+|||++........ .......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+.+..+
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 238 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 238 (291)
T ss_pred CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 9999999999976543221 11233456888999998876 568899999999999999998 99999887776655544
Q ss_pred HHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 334 FKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 334 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.... . ......+|..+.+||.+||..||.+|||+.++++
T Consensus 239 ~~~~--~--------------------------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 239 TQGR--V--------------------------LERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred hCCC--C--------------------------CCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 2210 0 0111235678899999999999999999999986
No 316
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.3e-39 Score=315.53 Aligned_cols=247 Identities=23% Similarity=0.356 Sum_probs=198.8
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
++|.+.+.||+|+||.||+|.+..++ .||+|.+..... ..+.+.+|+.+++.++|+||+++++++.. ...|++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~v 78 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVSE---EPIYIV 78 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEcC---CCcEEE
Confidence 57999999999999999999876654 599998865432 23457789999999999999999988753 458999
Q ss_pred EeeccCC-hhhhhhC-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 198 FKYMEHD-LAGLAAS-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 198 ~e~~~~~-l~~~~~~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
|||+.++ +...+.. ....+++..+..++.||+.||.|||++||+|+||||+|||+++++.++|+|||++.........
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05069 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence 9999875 4444433 2335889999999999999999999999999999999999999999999999999866433222
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+..... +
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~-------------- 222 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYR-M-------------- 222 (260)
T ss_pred ccCCCccchhhCCHHHhcc-CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-C--------------
Confidence 2223345778999998765 468899999999999999999 9999998877766665533110 0
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
....+++..+.+||.+||..||.+||++.++++
T Consensus 223 -------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 223 -------------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred -------------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 011346778999999999999999999999985
No 317
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.6e-39 Score=313.85 Aligned_cols=246 Identities=30% Similarity=0.467 Sum_probs=205.0
Q ss_pred ecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCC
Q 011041 126 IGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHD 204 (495)
Q Consensus 126 LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~ 204 (495)
||+|+||.||++.+..+++.||+|++..... .......+.+|+.+++.++|+||+++++.+.. +..+|++|||+.++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e~~~~~ 78 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQT--EEKLYLVLEYAPGG 78 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeec--CCeeEEEEecCCCC
Confidence 6999999999999998999999999987644 33456678899999999999999999999877 56899999999665
Q ss_pred hhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccccccC
Q 011041 205 LAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVVTL 284 (495)
Q Consensus 205 l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~ 284 (495)
.+.........+++..+..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++....... .......++.
T Consensus 79 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~ 157 (250)
T cd05123 79 ELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFCGTP 157 (250)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCcCCc
Confidence 555555445578999999999999999999999999999999999999999999999999998764332 1234456788
Q ss_pred CCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCccccc
Q 011041 285 WYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKR 364 (495)
Q Consensus 285 ~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (495)
.|++||.+.+ ..++.++|+|||||++|+|++|..||...+.......+... .+
T Consensus 158 ~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~~------------------------ 210 (250)
T cd05123 158 EYLAPEVLLG-KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD--PL------------------------ 210 (250)
T ss_pred cccChHHhCC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC--CC------------------------
Confidence 9999998876 45788999999999999999999999877765555554321 00
Q ss_pred ccccccCCCCCCcHHHHHHhccCCCCCccCH---HHHHhCCCC
Q 011041 365 CIAETFKDFPPSSLPLIETLLAIDPAERQTA---TAALRSEFF 404 (495)
Q Consensus 365 ~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta---~elL~hp~f 404 (495)
.....++..+.++|.+||..||.+|||+ .+++.||||
T Consensus 211 ---~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 211 ---RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred ---CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 1112347788999999999999999999 999999998
No 318
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.8e-39 Score=316.00 Aligned_cols=248 Identities=23% Similarity=0.388 Sum_probs=200.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|+++++||+|+||.||+|.+. +++.||+|.+...... ...+.+|+.+++.++|+||+++++++.. ...|+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~ 77 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVTQ---EPIYI 77 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEcc---CCcEE
Confidence 478999999999999999999865 5678999998755433 3467889999999999999999998754 45899
Q ss_pred EEeeccCChh-hhhhC-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEHDLA-GLAAS-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~~l~-~~~~~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
+|||+.++.+ ..+.. ....+++.++..++.||+.||+|||++||+||||||+||+++.++.++|+|||++........
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05067 78 ITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY 157 (260)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence 9999986544 43332 345789999999999999999999999999999999999999999999999999977653222
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
.......++..|+|||++.+ ..++.++|||||||++|+|++ |++||.+.+..+....+......
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-------------- 222 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM-------------- 222 (260)
T ss_pred ccccCCcccccccCHHHhcc-CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC--------------
Confidence 22233345678999998865 467899999999999999998 99999987766655554221100
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....++.++.+||.+||..||++|||+++++.
T Consensus 223 --------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 223 --------------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred --------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 111345678999999999999999999999985
No 319
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.2e-39 Score=337.15 Aligned_cols=253 Identities=20% Similarity=0.251 Sum_probs=197.3
Q ss_pred CCCeeeeeeecccCceEEEEEEECCC-----CeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLT-----GQIVALKKVRFDNLEPESVRFMAREILILRRLD-HPNVVKLEGLVTSRM 190 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~-----g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~ 190 (495)
.++|++++.||+|+||.||+|++... +..||||++.... .....+.+.+|+.+|..++ |||||++++++..
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~-- 112 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK-- 112 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc--
Confidence 47899999999999999999987433 4579999986543 3344567889999999996 9999999999976
Q ss_pred CceeEEEEeeccCChhhhhhCC----------------------------------------------------------
Q 011041 191 SCSLYLVFKYMEHDLAGLAASP---------------------------------------------------------- 212 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~~---------------------------------------------------------- 212 (495)
...+||||||+.++.+..++..
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 5679999999987644332210
Q ss_pred --------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC
Q 011041 213 --------------------------------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN 254 (495)
Q Consensus 213 --------------------------------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~ 254 (495)
...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeC
Confidence 124788889999999999999999999999999999999999
Q ss_pred CCcEEEeecccccccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 011041 255 EGILTIADFGLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHK 332 (495)
Q Consensus 255 ~~~vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~ 332 (495)
++.+||+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+......+..
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~ 351 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD-NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYN 351 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHH
Confidence 99999999999976533221 11223456788999998876 568999999999999999997 9999987554333332
Q ss_pred HHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 333 IFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 333 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.......+ .....++.++.+||.+||..||.+|||+.++.+
T Consensus 352 ~~~~~~~~---------------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 352 KIKSGYRM---------------------------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHhcCCCC---------------------------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 22211000 011246778899999999999999999998875
No 320
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.1e-39 Score=315.10 Aligned_cols=244 Identities=20% Similarity=0.279 Sum_probs=195.9
Q ss_pred eeecccCceEEEEEEECCCC---eEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEee
Q 011041 124 DKIGQGTYSNVYKARDTLTG---QIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKY 200 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g---~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~ 200 (495)
++||+|+||.||+|+...++ ..||+|.+...... .....+.+|+.+++.++|+||+++++++.. ...++||||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG---EPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC---CceEEEEEe
Confidence 46999999999999876554 78999998765543 455678899999999999999999998764 358999999
Q ss_pred ccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCc--
Q 011041 201 MEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMT-- 278 (495)
Q Consensus 201 ~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~-- 278 (495)
+.++.+...+.....+++..+..++.||+.+|.|||+.||+|+||||+|||++.++.+||+|||++............
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 77 APLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 987655555555557999999999999999999999999999999999999999999999999999876443321111
Q ss_pred cccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCC
Q 011041 279 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFK 357 (495)
Q Consensus 279 ~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 357 (495)
...++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+..+....+.... +
T Consensus 157 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~--~----------------- 216 (257)
T cd05060 157 AGRWPLKWYAPECINY-GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE--R----------------- 216 (257)
T ss_pred CccccccccCHHHhcC-CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC--c-----------------
Confidence 1123467999998865 568999999999999999998 999998877665554443210 0
Q ss_pred CCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 358 PQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
......++..+.+||.+||..||.+|||+.++++
T Consensus 217 ---------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 217 ---------LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred ---------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0112346778899999999999999999999985
No 321
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-41 Score=307.06 Aligned_cols=259 Identities=25% Similarity=0.364 Sum_probs=200.5
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeecc---CCc
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSR---MSC 192 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~---~~~ 192 (495)
...+|.+.+.||+|+|+-||+++...++..||+|+|.... .+..+...+||...++++||||++++++.... ...
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 3578999999999999999999999999999999998765 56677888999999999999999998876431 245
Q ss_pred eeEEEEeeccCC-hhhhh---hCCCCCCCHHHHHHHHHHHHHHHHHhhhCC--ceeccCCCCCeeeCCCCcEEEeecccc
Q 011041 193 SLYLVFKYMEHD-LAGLA---ASPTIKFTQAQVKCYMHQLLSGLEHCHNQH--VLHRDIKGSNLLIDNEGILTIADFGLA 266 (495)
Q Consensus 193 ~~~lv~e~~~~~-l~~~~---~~~~~~l~e~~~~~i~~qil~~L~~LH~~g--ivHrDlKp~NILl~~~~~vkL~DFG~a 266 (495)
..||+++|...+ ++..+ ...+..++|.++..|+.+|++||++||+.. +.||||||.|||+.+++.++|.|||.+
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCc
Confidence 699999998866 44433 234557999999999999999999999998 999999999999999999999999998
Q ss_pred cccCCCCC--------CCCccccccCCCCCcccccC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh
Q 011041 267 SFFDPNHK--------QPMTSRVVTLWYRPPELLLG--ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKL 336 (495)
Q Consensus 267 ~~~~~~~~--------~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~ 336 (495)
+...-.-. +.......|..|+|||++.- ....+.++|||||||+||.|+.|..||... +..
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~---------~~~ 247 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI---------YQQ 247 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH---------hhc
Confidence 75431110 11123346899999998732 234688999999999999999999999431 211
Q ss_pred cCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 337 CGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
-|+..- .....+-.+ .+ -..+|..+.+||+.||+.||.+||++.++|.+
T Consensus 248 GgSlaL-----------Av~n~q~s~----P~-~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 248 GGSLAL-----------AVQNAQISI----PN-SSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred CCeEEE-----------eeecccccc----CC-CCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 111000 000000000 00 12378899999999999999999999999864
No 322
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.7e-39 Score=320.23 Aligned_cols=251 Identities=22% Similarity=0.324 Sum_probs=200.9
Q ss_pred CCCeeeeeeecccCceEEEEEEEC-----CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDT-----LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
..+|.+.++||+|+||.||++... .++..||+|.+... .......+.+|+.+++.++|+||+++++++.+ .
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 79 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTE--G 79 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEec--C
Confidence 357888999999999999999743 35678999987643 34556688999999999999999999999877 4
Q ss_pred ceeEEEEeeccCChhhhhhCCC---------------CCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC
Q 011041 192 CSLYLVFKYMEHDLAGLAASPT---------------IKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG 256 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~~---------------~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~ 256 (495)
...|++|||+.++.+..+.... ..+++..+..++.||+.||.|||++||+||||||+|||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence 6789999999876555443221 3588999999999999999999999999999999999999999
Q ss_pred cEEEeecccccccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 011041 257 ILTIADFGLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIF 334 (495)
Q Consensus 257 ~vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~ 334 (495)
.+||+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+.+..+.
T Consensus 160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 238 (280)
T cd05092 160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT 238 (280)
T ss_pred CEEECCCCceeEcCCCceeecCCCccccccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH
Confidence 999999999975532211 11122345788999998876 468999999999999999998 999998877766665553
Q ss_pred HhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 335 KLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 335 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
..... .....+|+.+.+||.+||+.||.+||++.++++
T Consensus 239 ~~~~~----------------------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 239 QGREL----------------------------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred cCccC----------------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 21100 111346778899999999999999999999985
No 323
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-39 Score=324.51 Aligned_cols=253 Identities=20% Similarity=0.295 Sum_probs=198.7
Q ss_pred CCCeeeeeeecccCceEEEEEEECC-------CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeec
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTL-------TGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTS 188 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~-------~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~ 188 (495)
.++|.+.+.||+|+||.||++++.. ++..||+|.+.... .......+.+|+.+++.+ +|+||+++++++..
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 3789999999999999999998643 33579999987543 234456688899999999 79999999999877
Q ss_pred cCCceeEEEEeeccCChhhhhhCC----------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeee
Q 011041 189 RMSCSLYLVFKYMEHDLAGLAASP----------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLI 252 (495)
Q Consensus 189 ~~~~~~~lv~e~~~~~l~~~~~~~----------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl 252 (495)
...+|+||||+.++.+..++.. ...+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 96 --~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill 173 (307)
T cd05098 96 --DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 173 (307)
T ss_pred --CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEE
Confidence 4579999999987544433321 1248889999999999999999999999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCCC-CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 011041 253 DNEGILTIADFGLASFFDPNHKQP-MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQL 330 (495)
Q Consensus 253 ~~~~~vkL~DFG~a~~~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~ 330 (495)
+.++.+||+|||++.......... .....+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+..
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~ 252 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 252 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhcc-CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence 999999999999987653221111 112234568999998876 468999999999999999998 89999877665554
Q ss_pred HHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 331 HKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 331 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
..+.... .......++.++.+||.+||..||.+|||+.+++++
T Consensus 253 ~~~~~~~----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 253 KLLKEGH----------------------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHHHcCC----------------------------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 4432110 001123467788999999999999999999999863
No 324
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.8e-39 Score=322.55 Aligned_cols=253 Identities=20% Similarity=0.284 Sum_probs=200.5
Q ss_pred CCCeeeeeeecccCceEEEEEEE-----CCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARD-----TLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRM 190 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~-----~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~ 190 (495)
.++|.+.+.||+|+||.||++.+ ..++..||+|++.... .....+.+.+|+.+++++ +|+||+++++++..
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 110 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTI-- 110 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEec--
Confidence 46899999999999999999975 3456689999987543 234456788999999999 79999999999877
Q ss_pred CceeEEEEeeccCChhhhhh-CC-CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccc
Q 011041 191 SCSLYLVFKYMEHDLAGLAA-SP-TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASF 268 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~-~~-~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~ 268 (495)
...+|++|||+.++.+..+. .. ...+++.++..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++..
T Consensus 111 ~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 111 GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence 46799999999866554443 32 23489999999999999999999999999999999999999999999999999976
Q ss_pred cCCCCCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhh
Q 011041 269 FDPNHKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWK 346 (495)
Q Consensus 269 ~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 346 (495)
....... ......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+.+.++......+
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~------ 263 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRM------ 263 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhcc-CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcC------
Confidence 5432211 1122345778999998876 457899999999999999998 999998877655554443211000
Q ss_pred hCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 347 KSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....+++.+.+||.+||..||++|||+.++++
T Consensus 264 ---------------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 264 ---------------------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred ---------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 011235678899999999999999999999986
No 325
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.7e-39 Score=322.56 Aligned_cols=259 Identities=20% Similarity=0.284 Sum_probs=201.0
Q ss_pred CCCeeeeeeecccCceEEEEEEECCC--------------CeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeee
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLT--------------GQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKL 182 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~--------------g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l 182 (495)
.++|++.+.||+|+||.||+|++..+ ...||+|++... ........+.+|+++|+.++|+||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 36899999999999999999987543 235899998754 334455678899999999999999999
Q ss_pred eceeeccCCceeEEEEeeccCChhhhhhCCC------------CCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCe
Q 011041 183 EGLVTSRMSCSLYLVFKYMEHDLAGLAASPT------------IKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNL 250 (495)
Q Consensus 183 ~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~------------~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NI 250 (495)
++++.. ....|+||||+.++.+..+.... ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus 83 ~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni 160 (295)
T cd05097 83 LGVCVS--DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNC 160 (295)
T ss_pred EEEEcC--CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhE
Confidence 999976 56799999999876554433211 2368889999999999999999999999999999999
Q ss_pred eeCCCCcEEEeecccccccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCChH
Q 011041 251 LIDNEGILTIADFGLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA--EKPIMPGRTEV 327 (495)
Q Consensus 251 Ll~~~~~vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt--G~~pf~~~~~~ 327 (495)
|++.++.+||+|||++........ .......++..|+|||++.+ ..++.++|||||||++|+|++ |..||...+..
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 999999999999999976533221 11122345678999998875 468999999999999999988 67889887776
Q ss_pred HHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 328 EQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 328 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
+....+........... .......+|+.+.+||.+||..||.+|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 240 QVIENTGEFFRNQGRQI---------------------YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHHhhhhccccc---------------------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 66655433211100000 01112346778999999999999999999999975
No 326
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.1e-39 Score=315.86 Aligned_cols=252 Identities=23% Similarity=0.355 Sum_probs=203.0
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCC---eEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTG---QIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g---~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
.++|++.+.||+|+||.||+|+++.++ ..||+|.+.... .......+.+|+.+++.++||||+++++++.. +..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 79 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK--SKP 79 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--CCc
Confidence 357999999999999999999886544 379999886543 33445678899999999999999999999876 567
Q ss_pred eEEEEeeccCChhh-hhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 194 LYLVFKYMEHDLAG-LAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 194 ~~lv~e~~~~~l~~-~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.|+||||+.++.+. .+......+++.++..++.||+.||.|||++||+||||||+|||++.++.++|+|||++..+...
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 80 VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999876544 44444457899999999999999999999999999999999999999999999999999876543
Q ss_pred CCCCCc--cccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 273 HKQPMT--SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 273 ~~~~~~--~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
...... ...++..|++||++.+ ..++.++|+|||||++|++++ |..||.+.+..+....+......
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~---------- 228 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRL---------- 228 (267)
T ss_pred cceeeecCCCccceeecCHhHhcc-CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcC----------
Confidence 221111 1223567999998875 468999999999999999886 99999887776666555432110
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....+++.+.+|+.+||+.||.+||++.++++
T Consensus 229 ------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 229 ------------------PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred ------------------CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 011246778899999999999999999999985
No 327
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.1e-39 Score=318.57 Aligned_cols=266 Identities=23% Similarity=0.333 Sum_probs=198.0
Q ss_pred CCe-eeeeeecccCceEEEEEE----ECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc
Q 011041 118 DTF-EKLDKIGQGTYSNVYKAR----DTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 118 ~~y-~~~~~LG~G~~g~Vy~a~----~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 192 (495)
++| ++++.||+|+||+||++. ...++..||+|++.... .......+.+|+.+|+.++||||+++++++......
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK 81 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence 345 899999999999998864 34578899999987543 223446678899999999999999999988765456
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.+|++|||+.++.+....... .+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+...
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 160 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 160 (283)
T ss_pred eEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCc
Confidence 789999999987666555433 5999999999999999999999999999999999999999999999999999866432
Q ss_pred CCC--CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc-CCCChhhhhhCC
Q 011041 273 HKQ--PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLC-GSPSEEYWKKSK 349 (495)
Q Consensus 273 ~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~-g~~~~~~~~~~~ 349 (495)
... ......++..|+|||.+.+ ..++.++|||||||++|+|++|..||...... +..+.... +......+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~- 236 (283)
T cd05080 161 HEYYRVREDGDSPVFWYAVECLKE-NKFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQGQMTVVRLIEL- 236 (283)
T ss_pred chhhccCCCCCCCceeeCHhHhcc-cCCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccccccchhhhhhh-
Confidence 211 1122245667999998865 56889999999999999999999998654321 11111100 00000000000
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
. ... ........++.++.+|+..||..||.+|||+.++++
T Consensus 237 ~------~~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 237 L------ERG-----MRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred h------hcC-----CCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0 000 000112356788999999999999999999999985
No 328
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3.8e-39 Score=314.99 Aligned_cols=252 Identities=20% Similarity=0.338 Sum_probs=203.9
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCe---EEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQ---IVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~---~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
.++|+..+.||+|+||.||+|+++.++. .||+|.+.... .......+.+|+.+++.++|+||+++++++.+ ...
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 80 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK--FKP 80 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc--CCC
Confidence 3578899999999999999999876654 79999886543 33445678899999999999999999999977 467
Q ss_pred eEEEEeeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 194 LYLVFKYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.|+||||+.++.+..+. .....+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 89999999986665544 34457899999999999999999999999999999999999999999999999999766432
Q ss_pred CCCCCcc--ccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 273 HKQPMTS--RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 273 ~~~~~~~--~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
....... ...++.|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+....+......+
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~--------- 230 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLP--------- 230 (268)
T ss_pred cccceeccCCCcCceecCHHHhhc-CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCC---------
Confidence 2221111 123457999998875 567899999999999999997 999998887777666664321111
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
...+.+.++.+|+.+||..||.+||++.++++
T Consensus 231 -------------------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 231 -------------------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred -------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 11245678899999999999999999999986
No 329
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.9e-39 Score=312.80 Aligned_cols=244 Identities=24% Similarity=0.368 Sum_probs=199.6
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|++.+.||.|+||.||+|.+. |+.||+|.+..... ....+.+|+.+++.++|+||+++++++.+ ....|+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~ 77 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQ--GNPLYI 77 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcC--CCCeEE
Confidence 468999999999999999999754 78999999875432 45678899999999999999999999887 567999
Q ss_pred EEeeccCChhhhhhCCC--CCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEHDLAGLAASPT--IKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~--~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
||||+.++.+....... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++.......
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~- 156 (256)
T cd05039 78 VTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ- 156 (256)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc-
Confidence 99999975544444322 268999999999999999999999999999999999999999999999999998663221
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
.....+..|+|||.+.+ ..++.++|||||||++|+|++ |..||...+..+....+.... .
T Consensus 157 ---~~~~~~~~~~ape~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-~-------------- 217 (256)
T cd05039 157 ---DSGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY-R-------------- 217 (256)
T ss_pred ---ccCCCcccccCchhhcC-CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC-C--------------
Confidence 12334667999998865 468899999999999999997 999998877665544442210 0
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
......+|+.+.+||.+||..||.+|||+.+++.
T Consensus 218 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 218 -------------MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred -------------CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 0112346788999999999999999999999986
No 330
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.8e-39 Score=329.88 Aligned_cols=255 Identities=22% Similarity=0.341 Sum_probs=196.7
Q ss_pred CCCeeeeeeecccCceEEEEEEE-----CCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARD-----TLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRM 190 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~-----~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~ 190 (495)
.++|++.+.||+|+||.||+|++ ..+++.||||+++... .......+.+|+.+|..+ +|+||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~- 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC-
Confidence 36899999999999999999985 3567899999997543 234456788899999999 689999999988654
Q ss_pred CceeEEEEeeccCChhhhhhCC----------------------------------------------------------
Q 011041 191 SCSLYLVFKYMEHDLAGLAASP---------------------------------------------------------- 212 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~~---------------------------------------------------------- 212 (495)
...++++|||++++.+..++..
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 4568999999997655443321
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC-CCCccccc
Q 011041 213 ---------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK-QPMTSRVV 282 (495)
Q Consensus 213 ---------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~-~~~~~~~g 282 (495)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ .......+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 12367888899999999999999999999999999999999999999999999976532211 11122345
Q ss_pred cCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcc
Q 011041 283 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQS 361 (495)
Q Consensus 283 t~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (495)
++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+......+.........+
T Consensus 244 ~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------- 301 (343)
T cd05103 244 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--------------------- 301 (343)
T ss_pred CcceECcHHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCC---------------------
Confidence 677999998876 568999999999999999997 999998755433332222110000
Q ss_pred cccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 362 YKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 362 ~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
......++++.+++..||..||.+|||+.++++|
T Consensus 302 ------~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 302 ------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred ------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0011245678999999999999999999999986
No 331
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.1e-39 Score=322.92 Aligned_cols=252 Identities=19% Similarity=0.296 Sum_probs=199.9
Q ss_pred CCCeeeeeeecccCceEEEEEEECC-------CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeec
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTL-------TGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTS 188 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~-------~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~ 188 (495)
.++|.+.+.||+|+||.||+|++.. ....||+|.+.... .......+.+|+.+++.+ +||||+++++++.+
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 3689999999999999999998632 34579999887543 344566788999999999 69999999999876
Q ss_pred cCCceeEEEEeeccCChhhhhhCC----------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeee
Q 011041 189 RMSCSLYLVFKYMEHDLAGLAASP----------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLI 252 (495)
Q Consensus 189 ~~~~~~~lv~e~~~~~l~~~~~~~----------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl 252 (495)
...+|++|||+.++.+..+... ...+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 90 --~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill 167 (314)
T cd05099 90 --EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV 167 (314)
T ss_pred --CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE
Confidence 4679999999987655443321 2358899999999999999999999999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 011041 253 DNEGILTIADFGLASFFDPNHKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQL 330 (495)
Q Consensus 253 ~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~ 330 (495)
+.++.+||+|||+++........ ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.+
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~ 246 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF 246 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHcc-CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999765432111 1112234567999998876 568999999999999999999 89999887776666
Q ss_pred HHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 331 HKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 331 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
..+.... .......++.++.+||.+||..||.+|||+.++++
T Consensus 247 ~~~~~~~----------------------------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 247 KLLREGH----------------------------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHcCC----------------------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 6553210 00112345678899999999999999999999986
No 332
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.1e-39 Score=322.15 Aligned_cols=253 Identities=20% Similarity=0.301 Sum_probs=201.8
Q ss_pred CCCeeeeeeecccCceEEEEEEEC-------CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeec
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDT-------LTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTS 188 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~-------~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~ 188 (495)
.++|.+.+.||+|+||.||+|++. .++..||+|.+... ........+.+|+.+++.+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 578999999999999999999753 24467999988643 2344556788999999999 89999999999987
Q ss_pred cCCceeEEEEeeccCChhhhhhCC----------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeee
Q 011041 189 RMSCSLYLVFKYMEHDLAGLAASP----------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLI 252 (495)
Q Consensus 189 ~~~~~~~lv~e~~~~~l~~~~~~~----------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl 252 (495)
...+|++|||+.++.+..++.. ...++...+..++.||+.||.|||++||+||||||+|||+
T Consensus 93 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili 170 (304)
T cd05101 93 --DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV 170 (304)
T ss_pred --CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE
Confidence 5678999999987554433321 2357888999999999999999999999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 011041 253 DNEGILTIADFGLASFFDPNHKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQL 330 (495)
Q Consensus 253 ~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~ 330 (495)
+.++.+||+|||++......... ......+++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+..
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~ 249 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 249 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence 99999999999999876432221 1122345678999998876 568899999999999999998 88999888776666
Q ss_pred HHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 331 HKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 331 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
..+..... ......++..+.+||.+||..+|.+|||+.++++.
T Consensus 250 ~~~~~~~~----------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 250 KLLKEGHR----------------------------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHcCCc----------------------------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 55532110 01123467789999999999999999999999873
No 333
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2.2e-39 Score=315.30 Aligned_cols=253 Identities=25% Similarity=0.426 Sum_probs=202.9
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecC---CCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFD---NLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~---~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
+|.+.+.||+|+||.||++++..++..+++|++... .........+.+|+.+++.++||||+++++++.+ ....+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 78 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE--RDAFC 78 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc--CCceE
Confidence 588999999999999999999888777777766532 2233344557789999999999999999999876 45689
Q ss_pred EEEeeccCChhhhhh----CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 196 LVFKYMEHDLAGLAA----SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 196 lv~e~~~~~l~~~~~----~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
+||||+.++.+.... .....+++..+..++.||+.||.|||++|++|+||||+||+++. +.+||+|||++.....
T Consensus 79 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~ 157 (260)
T cd08222 79 IITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG 157 (260)
T ss_pred EEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCC
Confidence 999999876555433 23457999999999999999999999999999999999999975 6799999999876643
Q ss_pred CCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 272 NHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 272 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
... ......|++.|+|||.+.+ ..++.++|+||||+++|+|++|..||.+.+.......+... .++
T Consensus 158 ~~~-~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~---------- 223 (260)
T cd08222 158 SCD-LATTFTGTPYYMSPEALKH-QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG--PTP---------- 223 (260)
T ss_pred Ccc-cccCCCCCcCccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC--CCC----------
Confidence 321 2234467889999998765 45788999999999999999999999877666555554321 100
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
.....++.++.+||.+||..||.+||++.++++||||
T Consensus 224 ----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 224 ----------------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred ----------------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 1113466788999999999999999999999999997
No 334
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4.5e-39 Score=317.14 Aligned_cols=251 Identities=21% Similarity=0.286 Sum_probs=196.8
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeE----EEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQI----VALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~----vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 192 (495)
.++|++++.||+|+||+||+|++..+|+. |++|.+... ........+..|+.++..++||||+++++++.. .
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~---~ 81 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG---A 81 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC---C
Confidence 46899999999999999999998877764 677776432 223344667788999999999999999998754 3
Q ss_pred eeEEEEeeccCC-hhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 193 SLYLVFKYMEHD-LAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 193 ~~~lv~e~~~~~-l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
..++++||+.++ +...+......+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 578899999865 4444444456799999999999999999999999999999999999999999999999999986643
Q ss_pred CCCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 272 NHKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 272 ~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
.... ......++..|++||++.+ ..++.++|||||||++|||++ |..||.+.........+.+ ...+.
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~-------- 231 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILF-GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK-GERLA-------- 231 (279)
T ss_pred CCcccccCCCCCcccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCcCC--------
Confidence 3221 1223456778999998875 468999999999999999998 9999988765544333211 10000
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....+.++.+++.+|+..||.+|||+.++++
T Consensus 232 -------------------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 232 -------------------QPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred -------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 01123456788999999999999999999986
No 335
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.9e-39 Score=315.33 Aligned_cols=252 Identities=22% Similarity=0.383 Sum_probs=203.2
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCe---EEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQ---IVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~---~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
.++|++.+.||+|+||.||+|.+..++. .||||++... ........+..|+.+++.++||||+++++++.. +..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~ 79 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK--SRP 79 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC--CCc
Confidence 3579999999999999999999887664 6999998654 244556778999999999999999999999876 567
Q ss_pred eEEEEeeccCChhhhh-hCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 194 LYLVFKYMEHDLAGLA-ASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~-~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.++||||+.++.+..+ ......+++.++..++.|++.||.|||++|++|+||||+|||++.++.+||+|||++......
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 80 VMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred eEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 8999999987655544 344557899999999999999999999999999999999999999999999999998765432
Q ss_pred CCCC-Ccccc---ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhh
Q 011041 273 HKQP-MTSRV---VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKK 347 (495)
Q Consensus 273 ~~~~-~~~~~---gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 347 (495)
.... ..... .+..|+|||.+.+ ..++.++|||||||++|||++ |.+||...+..+....+......
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~-------- 230 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRL-------- 230 (269)
T ss_pred ccccccccccCCCcceeecCHhHhcc-CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcC--------
Confidence 2111 11111 2457999998865 568999999999999999886 99999988777666665321100
Q ss_pred CCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 348 SKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
....++|..+.+|+..||..||.+||++.+++.
T Consensus 231 --------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 231 --------------------PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred --------------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 011346678899999999999999999999986
No 336
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=5.4e-39 Score=311.63 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=200.9
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
.+|++.+.||+|+||.||++.+. .+..+|+|.+...... ...+.+|+.+++.++||||+++++++.. ....|+|
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v 77 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTE--RSPICLV 77 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEcc--CCceEEE
Confidence 57999999999999999999875 4678999988754433 2457789999999999999999999877 4578999
Q ss_pred EeeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 198 FKYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 198 ~e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
|||+.++.+..+. .....+++..+..++.||+.+|.|||++|++|+||||+||+++.++.+||+|||++..........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 157 (256)
T cd05112 78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS 157 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccc
Confidence 9999987665544 334568999999999999999999999999999999999999999999999999987654322211
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
.....++..|+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+....+......
T Consensus 158 ~~~~~~~~~~~aPe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---------------- 220 (256)
T cd05112 158 STGTKFPVKWSSPEVFSF-SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRL---------------- 220 (256)
T ss_pred cCCCccchhhcCHhHhcc-CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCC----------------
Confidence 222345678999998875 568899999999999999998 99999887776666555321100
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
......+..+.+|+.+||..||.+|||+.+++++
T Consensus 221 ------------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 221 ------------YKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred ------------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 0012246778999999999999999999999873
No 337
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=4.1e-39 Score=318.92 Aligned_cols=250 Identities=20% Similarity=0.293 Sum_probs=197.7
Q ss_pred CeeeeeeecccCceEEEEEEECC-----CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTL-----TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
+|++.+.||+|+||.||+|++.. ....+++|.+.... .......+.+|+.+++.++||||+++++.+.. ...
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ--DGP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec--CCC
Confidence 47888999999999999998753 23578888886443 33445678899999999999999999999876 456
Q ss_pred eEEEEeeccCChhhhhhCC------------------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCC
Q 011041 194 LYLVFKYMEHDLAGLAASP------------------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSN 249 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~------------------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~N 249 (495)
.|++|||+.++.+..++.. ...+++..+..++.||+.||.|||++||+||||||+|
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n 157 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN 157 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence 8999999997655543321 2357899999999999999999999999999999999
Q ss_pred eeeCCCCcEEEeecccccccCCCCCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChH
Q 011041 250 LLIDNEGILTIADFGLASFFDPNHKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEV 327 (495)
Q Consensus 250 ILl~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~ 327 (495)
|||++++.+||+|||++......... ......++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||.+....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 236 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE 236 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc-CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 99999999999999999765322211 1122345678999998865 568999999999999999998 99999887766
Q ss_pred HHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 328 EQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 328 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
+.+..+..... ......++.++.+||..||+.||.+||++.+++.
T Consensus 237 ~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 237 RLFNLLKTGYR----------------------------MERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHHhCCCC----------------------------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 65544322110 0011346678899999999999999999999985
No 338
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=4.1e-39 Score=311.89 Aligned_cols=249 Identities=26% Similarity=0.397 Sum_probs=201.5
Q ss_pred eeeeeeecccCceEEEEEEECCCC----eEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTG----QIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
+++.+.||.|+||.||+|++..++ ..||+|++.... .......+..|+.+++.++|+||+++++++.+ ....|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~ 77 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCTE--EEPLM 77 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEcC--CCeeE
Confidence 356789999999999999998766 899999986543 22256678899999999999999999999887 46799
Q ss_pred EEEeeccCChhhhhhC-CCCC-CCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC
Q 011041 196 LVFKYMEHDLAGLAAS-PTIK-FTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH 273 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~-~~~~-l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~ 273 (495)
++|||+.++.+..... .... +++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++.......
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999998765554443 2323 8999999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
........+++.|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+..+.+..+.....
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~-------------- 222 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKD-GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR-------------- 222 (258)
T ss_pred ccccccCCCcccccChHHhcc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC--------------
Confidence 111112236789999998854 568999999999999999998 8999988777666665533110
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
......++.++.++|.+||..||.+|||+.++++
T Consensus 223 --------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 223 --------------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred --------------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 0111236778999999999999999999999986
No 339
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.5e-39 Score=318.96 Aligned_cols=252 Identities=22% Similarity=0.361 Sum_probs=200.6
Q ss_pred CCCeeeeeeecccCceEEEEEEEC-----CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDT-----LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
.++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.++||||+++++++.+ .
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~--~ 80 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAV--G 80 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcC--C
Confidence 468999999999999999999875 367899999987543 34455678899999999999999999999876 4
Q ss_pred ceeEEEEeeccCChhhhhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCC
Q 011041 192 CSLYLVFKYMEHDLAGLAASP----------------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSN 249 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~----------------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~N 249 (495)
...|++|||+.++.+...... ...+++..+..++.||+.||.|||++|++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 578999999987544433321 1247889999999999999999999999999999999
Q ss_pred eeeCCCCcEEEeecccccccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChH
Q 011041 250 LLIDNEGILTIADFGLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEV 327 (495)
Q Consensus 250 ILl~~~~~vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~ 327 (495)
||++.++.++|+|||++........ ........+..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9999999999999999875432211 11122334667999998875 568999999999999999997 88899887776
Q ss_pred HHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 328 EQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 328 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
+....+..... ......++.++.+||.+||+.||.+|||+.|+++
T Consensus 240 ~~~~~~~~~~~----------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 240 EVIYYVRDGNV----------------------------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHhcCCC----------------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 66555432110 0111346778999999999999999999999985
No 340
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=8.7e-39 Score=309.04 Aligned_cols=244 Identities=22% Similarity=0.322 Sum_probs=195.1
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccC
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEH 203 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~ 203 (495)
+.||+|+||.||+|... ++..||+|.+.... .......+.+|+.+++.++||||+++++++.. ....++||||+.+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQ--RQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec--CCccEEEEECCCC
Confidence 36899999999999854 68899999886543 34444568899999999999999999999877 4579999999987
Q ss_pred Chhhhh-hCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccccc
Q 011041 204 DLAGLA-ASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVV 282 (495)
Q Consensus 204 ~l~~~~-~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g 282 (495)
+.+... ......+++..+..++.||+.+|.|||++|++||||||+||+++.++.+||+|||++...............+
T Consensus 77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05085 77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI 156 (250)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence 655444 3344568999999999999999999999999999999999999999999999999987543322111122234
Q ss_pred cCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcc
Q 011041 283 TLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQS 361 (495)
Q Consensus 283 t~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 361 (495)
++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+.......+.....
T Consensus 157 ~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~----------------------- 212 (250)
T cd05085 157 PIKWTAPEALNY-GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYR----------------------- 212 (250)
T ss_pred cccccCHHHhcc-CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCC-----------------------
Confidence 667999998865 567899999999999999998 9999988776665555432110
Q ss_pred cccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 362 YKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 362 ~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
......++..+.+|+.+||..||.+||++.++++
T Consensus 213 -----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 213 -----MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred -----CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 0112346778999999999999999999999986
No 341
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.7e-39 Score=315.56 Aligned_cols=253 Identities=19% Similarity=0.337 Sum_probs=201.8
Q ss_pred CCeeeeeeecccCceEEEEEEECC-----CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTL-----TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 192 (495)
++|++++.||+|+||.||+|+.+. +.+.|++|.+.... .......+.+|+.++++++|+||+++++++.+ ..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~ 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCRE--AE 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECC--CC
Confidence 679999999999999999999754 34679999876432 23345678899999999999999999999876 46
Q ss_pred eeEEEEeeccCChhhhhhCCCC---------CCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeec
Q 011041 193 SLYLVFKYMEHDLAGLAASPTI---------KFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADF 263 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~---------~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DF 263 (495)
..|+||||++++.+..+..... .+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence 7899999999765554443322 6899999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCh
Q 011041 264 GLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSE 342 (495)
Q Consensus 264 G~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~ 342 (495)
|++...............+++.|+|||.+.+ ..++.++|||||||++|+|++ |..||.+.+....+..+.... .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~--~-- 236 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQE-DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGK--L-- 236 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCC--c--
Confidence 9987543322223344566888999998865 457889999999999999998 889998766655544442110 0
Q ss_pred hhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 343 EYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
.| .....++..+.++|.+||..||.+|||+.+++..
T Consensus 237 -~~----------------------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 237 -EL----------------------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred -CC----------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 00 0113467788999999999999999999999864
No 342
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.4e-39 Score=312.00 Aligned_cols=244 Identities=20% Similarity=0.346 Sum_probs=196.2
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
..+|++.+.||+|+||.||++... |..||+|.+.... ....+.+|+.+++.++|+||+++++++... ....|+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~l 77 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLYI 77 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-CCceEE
Confidence 468999999999999999999654 7889999986432 245678999999999999999999976543 456899
Q ss_pred EEeeccCChhh-hhhCC-CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEHDLAG-LAASP-TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~~l~~-~~~~~-~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
+|||++++.+. .+... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 156 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 156 (256)
T ss_pred EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC-
Confidence 99999875444 43332 2348899999999999999999999999999999999999999999999999987653321
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
....++..|+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+....+.+.. .
T Consensus 157 ---~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~--~------------- 217 (256)
T cd05082 157 ---DTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY--K------------- 217 (256)
T ss_pred ---CCCccceeecCHHHHcc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC--C-------------
Confidence 22344668999998765 568899999999999999997 999998776655554443210 0
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
......+++.+.+||.+||..||.+|||+.++++
T Consensus 218 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 218 -------------MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred -------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0112346788999999999999999999999975
No 343
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=3.1e-39 Score=346.48 Aligned_cols=279 Identities=21% Similarity=0.272 Sum_probs=188.8
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCC----CeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceee----
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLT----GQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVT---- 187 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~----g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~---- 187 (495)
..++|++.+.||+|+||.||+|++..+ +..||+|++..... .+....| .++...+.+++.++..+.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 468999999999999999999999988 99999998764321 1111111 122222333333322211
Q ss_pred ccCCceeEEEEeeccCChhhhhhCCCC--------------------CCCHHHHHHHHHHHHHHHHHhhhCCceeccCCC
Q 011041 188 SRMSCSLYLVFKYMEHDLAGLAASPTI--------------------KFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKG 247 (495)
Q Consensus 188 ~~~~~~~~lv~e~~~~~l~~~~~~~~~--------------------~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp 247 (495)
......+++||||+.++.+..+..... ...+..+..++.||+.||.|||++||+||||||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP 283 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKP 283 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCH
Confidence 123567999999999875544332211 122445778999999999999999999999999
Q ss_pred CCeeeCC-CCcEEEeecccccccCCCCCCCCccccccCCCCCcccccCCC---------------------CCCchhhHH
Q 011041 248 SNLLIDN-EGILTIADFGLASFFDPNHKQPMTSRVVTLWYRPPELLLGAT---------------------DYGVGVDLW 305 (495)
Q Consensus 248 ~NILl~~-~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---------------------~~~~~~Dvw 305 (495)
+||||+. ++.+||+|||++..+...........++|+.|+|||.+.... .++.++|||
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVw 363 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY 363 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccH
Confidence 9999986 589999999999866444333345668899999999764321 234567999
Q ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhc
Q 011041 306 SAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLL 385 (495)
Q Consensus 306 SlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L 385 (495)
|||||||||+++. |...+....+.+++..++... ..|.....+. .. ..... ..+.+......+.+||.+||
T Consensus 364 SlGviL~el~~~~--~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~---~~--~~~~~-~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 364 SAGLIFLQMAFPN--LRSDSNLIQFNRQLKRNDYDL-VAWRKLVEPR---AS--PDLRR-GFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred HHHHHHHHHHhCc--CCCchHHHHHHHHHHhcCCcH-HHHHHhhccc---cc--hhhhh-hhhhccccchHHHHHHHHHc
Confidence 9999999999854 455556666666666555433 3343211111 00 00000 01111222345679999999
Q ss_pred cCCCCCccCHHHHHhCCCCCCCCC
Q 011041 386 AIDPAERQTATAALRSEFFTTKPY 409 (495)
Q Consensus 386 ~~dP~~R~ta~elL~hp~f~~~~~ 409 (495)
++||.+|||+.++|+||||+...+
T Consensus 435 ~~dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 435 RFKGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred cCCcccCCCHHHHhCCcCcCCCCc
Confidence 999999999999999999987554
No 344
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=7.3e-39 Score=311.82 Aligned_cols=243 Identities=21% Similarity=0.274 Sum_probs=194.0
Q ss_pred eecccCceEEEEEEEC--CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeecc
Q 011041 125 KIGQGTYSNVYKARDT--LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYME 202 (495)
Q Consensus 125 ~LG~G~~g~Vy~a~~~--~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~ 202 (495)
.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.++++++|+||+++++++.. ...++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~---~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA---EALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC---CCeEEEEEeCC
Confidence 3899999999999765 456679999986543 34455678899999999999999999998754 36899999998
Q ss_pred CChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC--Ccc
Q 011041 203 HDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP--MTS 279 (495)
Q Consensus 203 ~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~--~~~ 279 (495)
++.+..+. .....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......... ...
T Consensus 78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 76555444 345579999999999999999999999999999999999999999999999999997654332211 112
Q ss_pred ccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCC
Q 011041 280 RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKP 358 (495)
Q Consensus 280 ~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 358 (495)
..+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+....+....+.... .
T Consensus 158 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~------------------ 216 (257)
T cd05115 158 GKWPLKWYAPECINF-RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGK--R------------------ 216 (257)
T ss_pred CCCCcccCCHHHHcc-CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC--C------------------
Confidence 223578999998765 468899999999999999996 999998887766655543211 0
Q ss_pred CcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 359 QQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 359 ~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.......++++.+||..||..||.+||++.++++
T Consensus 217 --------~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 217 --------LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0111345788999999999999999999999875
No 345
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=7.5e-39 Score=313.45 Aligned_cols=251 Identities=21% Similarity=0.326 Sum_probs=200.8
Q ss_pred CCCeeeeeeecccCceEEEEEEECCC---CeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLT---GQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
.++|.+.+.||+|+||.||+|.+... ...|+||.+.... .....+.+.+|+.+++.++|+||+++++++.+ ..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~ 80 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE---NP 80 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC---CC
Confidence 35789999999999999999987644 3568999876432 34455678899999999999999999998875 35
Q ss_pred eEEEEeeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 194 LYLVFKYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.|+||||+.++.+..+. .....+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++......
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 78999999876554444 33446899999999999999999999999999999999999999999999999999766433
Q ss_pred CCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCC
Q 011041 273 HKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLP 351 (495)
Q Consensus 273 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~ 351 (495)
.........++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||.+.+..+.+..+.....
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~------------- 226 (270)
T cd05056 161 SYYKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGER------------- 226 (270)
T ss_pred cceecCCCCccccccChhhhcc-CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCc-------------
Confidence 2111122234567999998765 568899999999999999986 9999998877766655432110
Q ss_pred CCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 352 HATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
......+|..+.+||.+||..||.+|||+.+++.
T Consensus 227 ---------------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 227 ---------------LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred ---------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0112356788999999999999999999999986
No 346
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.1e-38 Score=314.62 Aligned_cols=267 Identities=23% Similarity=0.342 Sum_probs=196.8
Q ss_pred CCeeeeeeecccCceEEEEEE----ECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 118 DTFEKLDKIGQGTYSNVYKAR----DTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~----~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
.+|++++.||+|+||.||+|. +..++..||+|.+... .......+.+|+.+++.++||||+++++++.......
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 579999999999999999997 4567889999998644 3445567889999999999999999999876544567
Q ss_pred eEEEEeeccCChhhh-hhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 194 LYLVFKYMEHDLAGL-AASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~-~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
+|+||||+.++.+.. +......+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++......
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 161 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD 161 (284)
T ss_pred eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence 899999998655544 4344456899999999999999999999999999999999999999999999999999876432
Q ss_pred CCCC--CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcC-CCChhhhhhCC
Q 011041 273 HKQP--MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCG-SPSEEYWKKSK 349 (495)
Q Consensus 273 ~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g-~~~~~~~~~~~ 349 (495)
.... .....++..|+|||++.+ ..++.++|||||||++|||++|..++..... .....+..... ......+.. .
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~ 238 (284)
T cd05081 162 KEYYKVREPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYSDKSCSPPA-EFMRMMGNDKQGQMIVYHLIE-L 238 (284)
T ss_pred CcceeecCCCCCceEeeCHHHhcc-CCcChHHHHHHHHHHHHHHhhcCCcCCCcch-hhhhhcccccccccchHHHHH-H
Confidence 2111 111223456999998875 4689999999999999999998876644321 11111100000 000000000 0
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
+ ... .......+++.++.+||.+||..||++|||+.++++
T Consensus 239 ~------~~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 239 L------KNN-----GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred H------hcC-----CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 0 000 000112456778999999999999999999999986
No 347
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=9e-39 Score=309.13 Aligned_cols=244 Identities=23% Similarity=0.330 Sum_probs=195.9
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccC
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEH 203 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~ 203 (495)
++||+|+||.||+|.+.. ++.||+|.+...... .....+.+|+.+++.++|+||+++++++.+ ....|+||||+.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQ--KQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEec--CCCeEEEEEcCCC
Confidence 369999999999999887 999999998765433 455678899999999999999999999877 5679999999987
Q ss_pred Chhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCC-cccc
Q 011041 204 DLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPM-TSRV 281 (495)
Q Consensus 204 ~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~-~~~~ 281 (495)
+.+..+. .....+++..+..++.|++.+|.|||++||+||||||+||||+.++.+||+|||++........... ....
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ 156 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence 6554433 4445689999999999999999999999999999999999999999999999999976542211111 1123
Q ss_pred ccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCc
Q 011041 282 VTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQ 360 (495)
Q Consensus 282 gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 360 (495)
++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+.......+......
T Consensus 157 ~~~~y~~PE~~~~-~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~--------------------- 214 (251)
T cd05041 157 IPIKWTAPEALNY-GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRM--------------------- 214 (251)
T ss_pred ceeccCChHhhcc-CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCC---------------------
Confidence 3567999998865 468999999999999999998 89999887765554444221000
Q ss_pred ccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 361 SYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 361 ~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....++..+.+||.+||..||.+|||+.++|+
T Consensus 215 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 215 -------PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred -------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 011345778999999999999999999999986
No 348
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=5.5e-39 Score=317.08 Aligned_cols=269 Identities=21% Similarity=0.345 Sum_probs=199.7
Q ss_pred CCeeeeeeecccCceEEEEEEE----CCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 118 DTFEKLDKIGQGTYSNVYKARD----TLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~----~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
..|++++.||+|+||.||+|+. ..++..||+|.+.... .......+.+|+.+++.++||||+++++++.......
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 3578999999999999999974 4678899999986543 3444567889999999999999999999987754567
Q ss_pred eEEEEeeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 194 LYLVFKYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.|+||||+.++.+..+. .....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+...
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 162 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence 89999999876655544 33346899999999999999999999999999999999999999999999999999876433
Q ss_pred CCC--CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 273 HKQ--PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 273 ~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
... ......++..|+|||++.+ ..++.++|||||||++|+|+++..|+..... .+ .+..+.......... .
T Consensus 163 ~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~ellt~~~~~~~~~~--~~---~~~~~~~~~~~~~~~-~ 235 (284)
T cd05079 163 KEYYTVKDDLDSPVFWYAPECLIQ-SKFYIASDVWSFGVTLYELLTYCDSESSPMT--LF---LKMIGPTHGQMTVTR-L 235 (284)
T ss_pred ccceeecCCCCCCccccCHHHhcc-CCCCccccchhhhhhhhhhhcCCCCCccccc--hh---hhhcccccccccHHH-H
Confidence 211 1123456778999998876 4688999999999999999998776543211 11 111111110000000 0
Q ss_pred CCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 351 PHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
. ..... .........++..+.+||.+||+.||.+|||+.+++++
T Consensus 236 ~--~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 236 V--RVLEE-----GKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred H--HHHHc-----CccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 0 00000 00011224577889999999999999999999999863
No 349
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=8.2e-39 Score=310.51 Aligned_cols=245 Identities=24% Similarity=0.326 Sum_probs=198.2
Q ss_pred eeecccCceEEEEEEECC-CC--eEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEee
Q 011041 124 DKIGQGTYSNVYKARDTL-TG--QIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKY 200 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~-~g--~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~ 200 (495)
+.||+|+||.||+|.+.. .+ ..||||.+...... .....+.+|+.++++++|+||+++++++.. ...++||||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT---HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC---CeEEEEEEe
Confidence 368999999999998865 33 36999999876544 566788899999999999999999999876 578999999
Q ss_pred ccCChhhh-hhCCC-CCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC--C
Q 011041 201 MEHDLAGL-AASPT-IKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ--P 276 (495)
Q Consensus 201 ~~~~l~~~-~~~~~-~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~--~ 276 (495)
+.++.+.. +.... ..+++..++.++.||+.||.|||++|++|+||||+|||++.++.+||+|||++..+...... .
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 98654444 33333 46899999999999999999999999999999999999999999999999999876442211 1
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
.....++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+..+.+..+.......
T Consensus 157 ~~~~~~~~~y~~pE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--------------- 220 (257)
T cd05040 157 EEHLKVPFAWCAPESLRT-RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERL--------------- 220 (257)
T ss_pred ccCCCCCceecCHHHhcc-cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcC---------------
Confidence 112356788999998765 568999999999999999998 999998888777766664311000
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....+|..+.+||..||..||.+|||+.++++
T Consensus 221 ------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 221 ------------ERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred ------------CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 011245778999999999999999999999986
No 350
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=8.9e-39 Score=314.61 Aligned_cols=253 Identities=19% Similarity=0.256 Sum_probs=201.5
Q ss_pred CCCeeeeeeecccCceEEEEEEECC----CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTL----TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 192 (495)
.++|++.+.||+|+||.||+|.+.. ++..|++|.+... ........+.+|+.+++.++|+||+++++++... ..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-~~ 82 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED-GE 82 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-CC
Confidence 4789999999999999999999876 3578999987633 3455667788999999999999999999987653 45
Q ss_pred eeEEEEeeccCChhhhhhCC--------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecc
Q 011041 193 SLYLVFKYMEHDLAGLAASP--------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFG 264 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~--------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG 264 (495)
..+++++|+.++.+..+... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g 162 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNA 162 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCC
Confidence 78999999986554443321 1468999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCh
Q 011041 265 LASFFDPNHKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSE 342 (495)
Q Consensus 265 ~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~ 342 (495)
+++.+...... ......++..|+|||++.+ ..++.++|||||||++|++++ |++||...+..+....+.... .+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~-- 238 (280)
T cd05043 163 LSRDLFPMDYHCLGDNENRPVKWMALESLVN-KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY-RL-- 238 (280)
T ss_pred CcccccCCceEEeCCCCCcchhccCHHHHhc-CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC-CC--
Confidence 99765332211 1122345677999998876 468999999999999999998 999998877665444332210 00
Q ss_pred hhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 343 EYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....+|+++.++|.+||..||++|||+.++++
T Consensus 239 -------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 239 -------------------------AQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred -------------------------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 001235678899999999999999999999985
No 351
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.4e-38 Score=310.03 Aligned_cols=248 Identities=22% Similarity=0.363 Sum_probs=199.0
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|++.+.||+|+||.||++.+. .+..||+|.+.... .....+.+|+.+++.++|+||+++++++.. ...|+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~ 77 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTK---EPIYI 77 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh---hHHHHHHHHHHHHHhcCCCCcceEEEEEcC---CCeEE
Confidence 478999999999999999999855 45579999886432 334678889999999999999999998875 45899
Q ss_pred EEeeccCC-hhhhhhC-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEHD-LAGLAAS-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~~-l~~~~~~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
+|||+.++ +...+.. ....+++..+..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||++........
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 157 (260)
T cd05073 78 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 157 (260)
T ss_pred EEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence 99999865 4444433 344678899999999999999999999999999999999999999999999999976643322
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
.......++..|+|||++.+ ..++.++|+|||||++|+|++ |.+||.+.+..+....+.....
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~--------------- 221 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR--------------- 221 (260)
T ss_pred ccccCCcccccccCHhHhcc-CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC---------------
Confidence 22223345677999998865 568889999999999999998 9999998776665554432110
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
......++.++.+++.+||+.||.+||++.+++.
T Consensus 222 -------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 222 -------------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred -------------CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 0112346778999999999999999999998874
No 352
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=6.5e-39 Score=313.19 Aligned_cols=239 Identities=19% Similarity=0.251 Sum_probs=186.6
Q ss_pred eeecccCceEEEEEEECC------------CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 124 DKIGQGTYSNVYKARDTL------------TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~------------~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
+.||+|+||.||+|+... ....|++|++.... ......+.+|+.+++.++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~--~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVR--D 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEec--C
Confidence 368999999999997432 22358888875432 3344567789999999999999999999876 4
Q ss_pred ceeEEEEeeccCChhhhhhC-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCc-------EEEeec
Q 011041 192 CSLYLVFKYMEHDLAGLAAS-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGI-------LTIADF 263 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~-------vkL~DF 263 (495)
...++||||++++.+..+.. ....+++..+..++.||+.||.|||++||+||||||+||||+.++. +|++||
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 56899999999877665554 3456999999999999999999999999999999999999987664 899999
Q ss_pred ccccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHhcCCCCh
Q 011041 264 GLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL-AEKPIMPGRTEVEQLHKIFKLCGSPSE 342 (495)
Q Consensus 264 G~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ell-tG~~pf~~~~~~~~~~~i~~~~g~~~~ 342 (495)
|++...... ....++..|+|||++.....++.++|||||||++|+|+ .|..||......+.. .+....
T Consensus 157 g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~----- 225 (262)
T cd05077 157 GIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQ----- 225 (262)
T ss_pred CCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcC-----
Confidence 998755322 33467889999998865567899999999999999998 588888765543322 111100
Q ss_pred hhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 343 EYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
.......++++.+||.+||+.||.+||++.++|++
T Consensus 226 ------------------------~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 226 ------------------------CMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred ------------------------ccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 00011234567899999999999999999999974
No 353
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.3e-39 Score=315.33 Aligned_cols=239 Identities=17% Similarity=0.213 Sum_probs=188.0
Q ss_pred eeecccCceEEEEEEECCCCeE-------EEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 124 DKIGQGTYSNVYKARDTLTGQI-------VALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~-------vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
+.||+|+||.||+|.+..++.. |++|.+.... ....+.+..|+.+++.++||||+++++++.. ....++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~--~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVC--GDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEe--CCCcEE
Confidence 3699999999999998765544 8888875432 3344567789999999999999999999887 456899
Q ss_pred EEeeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCc--------EEEeeccccc
Q 011041 197 VFKYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGI--------LTIADFGLAS 267 (495)
Q Consensus 197 v~e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~--------vkL~DFG~a~ 267 (495)
||||+.++.+..+. .....+++..+..++.||+.||.|||++||+||||||+|||++.++. ++|+|||++.
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999987655544 44456899999999999999999999999999999999999987764 6999999987
Q ss_pred ccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHhcCCCChhhhh
Q 011041 268 FFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAE-KPIMPGRTEVEQLHKIFKLCGSPSEEYWK 346 (495)
Q Consensus 268 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG-~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 346 (495)
.... .....+++.|+|||++.+...++.++|||||||++|+|++| .+||...+........ ....
T Consensus 157 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~-~~~~-------- 222 (258)
T cd05078 157 TVLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY-EDRH-------- 222 (258)
T ss_pred ccCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH-Hccc--------
Confidence 5532 23346788999999987656689999999999999999998 4666655544332211 1000
Q ss_pred hCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 347 KSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
......+.++.+||.+||+.||.+|||+.++++.
T Consensus 223 ---------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 223 ---------------------QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred ---------------------cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 0111234568899999999999999999999873
No 354
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.5e-39 Score=323.92 Aligned_cols=253 Identities=20% Similarity=0.291 Sum_probs=200.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECC-------CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeec
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTL-------TGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTS 188 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~-------~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~ 188 (495)
..+|++++.||+|+||.||+|++.. .+..||+|.+... ........+.+|+.+++++ +|+||+++++++..
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 3579999999999999999998643 2347899987643 3344567788999999999 89999999999877
Q ss_pred cCCceeEEEEeeccCChhhhhhCC----------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeee
Q 011041 189 RMSCSLYLVFKYMEHDLAGLAASP----------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLI 252 (495)
Q Consensus 189 ~~~~~~~lv~e~~~~~l~~~~~~~----------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl 252 (495)
...+|++|||+.++.+..++.. ...++...+..++.||+.||.|||++||+||||||+|||+
T Consensus 90 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill 167 (334)
T cd05100 90 --DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV 167 (334)
T ss_pred --CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE
Confidence 4579999999987655443321 2247788899999999999999999999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 011041 253 DNEGILTIADFGLASFFDPNHKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQL 330 (495)
Q Consensus 253 ~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~ 330 (495)
+.++.+||+|||+++........ ......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+..
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 246 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 246 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc-CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 99999999999999765432211 1122234567999998876 568899999999999999998 89999988777666
Q ss_pred HHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 331 HKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 331 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
..+.... .......++..+.+||.+||..+|.+|||+.+++++
T Consensus 247 ~~~~~~~----------------------------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 247 KLLKEGH----------------------------RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHcCC----------------------------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 5553210 001123456778999999999999999999999975
No 355
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1e-38 Score=317.10 Aligned_cols=258 Identities=19% Similarity=0.279 Sum_probs=197.2
Q ss_pred CCeeeeeeecccCceEEEEEEECC----------------CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeee
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTL----------------TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVK 181 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~----------------~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 181 (495)
++|++.+.||+|+||.||++.+.. ++..||+|++.... .......+.+|+.+|+.++|+||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcce
Confidence 579999999999999999986432 34579999987542 3344567889999999999999999
Q ss_pred eeceeeccCCceeEEEEeeccCChhhhhhCC-----------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCe
Q 011041 182 LEGLVTSRMSCSLYLVFKYMEHDLAGLAASP-----------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNL 250 (495)
Q Consensus 182 l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~-----------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NI 250 (495)
+++++.. ....|++|||+.++.+..+... ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 84 ~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 84 LLAVCIT--SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred EEEEEec--CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 9999877 4578999999987544433321 12477889999999999999999999999999999999
Q ss_pred eeCCCCcEEEeecccccccCCCCCCC-CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCChH
Q 011041 251 LIDNEGILTIADFGLASFFDPNHKQP-MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA--EKPIMPGRTEV 327 (495)
Q Consensus 251 Ll~~~~~vkL~DFG~a~~~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt--G~~pf~~~~~~ 327 (495)
|++.++.++|+|||++..+....... .....+++.|++||++.+ ..++.++|||||||++|||++ |..||...+..
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL-GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc-CCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 99999999999999997654322111 122334678999998765 468999999999999999998 77899877766
Q ss_pred HHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 328 EQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 328 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
+......... ..... .. .......+++.+.+||..||+.||.+|||+.++++
T Consensus 241 ~~~~~~~~~~--------~~~~~---~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 241 QVIENTGEFF--------RDQGR---QV----------YLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHH--------hhccc---cc----------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 6554432211 00000 00 00111235677899999999999999999999975
No 356
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.1e-39 Score=314.96 Aligned_cols=248 Identities=27% Similarity=0.403 Sum_probs=194.4
Q ss_pred eeeeeecccCceEEEEEEEC----CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 121 EKLDKIGQGTYSNVYKARDT----LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 121 ~~~~~LG~G~~g~Vy~a~~~----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.+.+.||.|.||.||+|... ..+..|+||++.. ....+..+.+.+|++++++++||||+++++++.. ....++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~--~~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE--NEPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES--SSSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeecccccccccccccccccccccc--cccccc
Confidence 46789999999999999887 4567899999954 3345557888999999999999999999999985 455999
Q ss_pred EEeeccCChhh-hhhCC-CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEHDLAG-LAASP-TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~~l~~-~~~~~-~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
||||+.++.+. .+... ...+++..+..++.||+.||.|||+++|+|+||++.||||+.++.+||+|||++........
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999865444 44433 46799999999999999999999999999999999999999999999999999987622111
Q ss_pred -CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 275 -QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 275 -~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
...........|+|||.+.+ ..++.++||||||+++|||++ |..||...+..+...++.+..-
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~-------------- 223 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKD-GEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR-------------- 223 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHH-SEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE--------------
T ss_pred ccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccc--------------
Confidence 11123346778999998876 348999999999999999999 7899988888777777633211
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
......++..+.+||..||..||.+|||+.++++
T Consensus 224 --------------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 224 --------------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp --------------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred --------------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1112346777899999999999999999999985
No 357
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=9.3e-39 Score=314.25 Aligned_cols=238 Identities=20% Similarity=0.264 Sum_probs=186.4
Q ss_pred eecccCceEEEEEEECCC------------------------CeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCee
Q 011041 125 KIGQGTYSNVYKARDTLT------------------------GQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVV 180 (495)
Q Consensus 125 ~LG~G~~g~Vy~a~~~~~------------------------g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv 180 (495)
.||+|+||.||+|....+ ...|++|++.... ......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence 599999999999974321 2358888876432 23345677899999999999999
Q ss_pred eeeceeeccCCceeEEEEeeccCChhhhhhC-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC---
Q 011041 181 KLEGLVTSRMSCSLYLVFKYMEHDLAGLAAS-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG--- 256 (495)
Q Consensus 181 ~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~--- 256 (495)
++++++.. ....|+||||++++.+..+.. ....+++..+..++.||+.||+|||++||+||||||+|||++..+
T Consensus 80 ~~~~~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 80 FVHGVCVR--GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eEEEEEEe--CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999887 567899999999887665553 456789999999999999999999999999999999999997644
Q ss_pred ----cEEEeecccccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCChHHHHH
Q 011041 257 ----ILTIADFGLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL-AEKPIMPGRTEVEQLH 331 (495)
Q Consensus 257 ----~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ell-tG~~pf~~~~~~~~~~ 331 (495)
.+||+|||++...... ....++..|+|||.+.+...++.++|||||||++|||+ +|.+||.+.+..+...
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~ 232 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER 232 (274)
T ss_pred CccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence 4899999988644221 23457888999998876566899999999999999995 6999998766544322
Q ss_pred HHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 332 KIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 332 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
.+ .... ......++.+.+||.+||..||.+|||+.++|++
T Consensus 233 ~~-~~~~-----------------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 233 FY-EKKH-----------------------------RLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HH-Hhcc-----------------------------CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 11 1000 0011234568899999999999999999999974
No 358
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.2e-38 Score=312.23 Aligned_cols=242 Identities=24% Similarity=0.308 Sum_probs=189.6
Q ss_pred eecccCceEEEEEEECCCCe--EEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeEEEEeec
Q 011041 125 KIGQGTYSNVYKARDTLTGQ--IVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 125 ~LG~G~~g~Vy~a~~~~~g~--~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
.||+|+||.||+|++..++. .+++|.+... ........+.+|+.++.++ +||||+++++++.. ...+|+||||+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~~~~~lv~e~~ 78 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--RGYLYLAIEYA 78 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEcccc-CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec--CCCceEEEEeC
Confidence 58999999999999988775 4688877632 2345556788999999999 89999999999987 45789999999
Q ss_pred cCChhhhhhCC----------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeeccc
Q 011041 202 EHDLAGLAASP----------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGL 265 (495)
Q Consensus 202 ~~~l~~~~~~~----------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~ 265 (495)
.++.+..+... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence 86544433321 12478999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhh
Q 011041 266 ASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEY 344 (495)
Q Consensus 266 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~ 344 (495)
+....... .......+..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.+..+....
T Consensus 159 ~~~~~~~~--~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~------- 228 (270)
T cd05047 159 SRGQEVYV--KKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY------- 228 (270)
T ss_pred ccccchhh--hccCCCCccccCChHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC-------
Confidence 86332111 1111223567999998765 568999999999999999997 999998876665555442110
Q ss_pred hhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 345 WKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.......++.++.+||.+||..||.+|||+.+++.
T Consensus 229 ---------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 229 ---------------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred ---------------------CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 00011235677899999999999999999999986
No 359
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.3e-38 Score=329.38 Aligned_cols=254 Identities=20% Similarity=0.249 Sum_probs=199.1
Q ss_pred CCCeeeeeeecccCceEEEEEEEC-----CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDT-----LTGQIVALKKVRFDNLEPESVRFMAREILILRRLD-HPNVVKLEGLVTSRM 190 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~ 190 (495)
.++|.++++||+|+||.||+|++. .++..||+|++..... ....+.+.+|+.+|..+. |||||++++++..
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~-- 112 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLGACTK-- 112 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc--
Confidence 357889999999999999999864 3557899999976432 333456889999999997 9999999999877
Q ss_pred CceeEEEEeeccCChhhhhhCC----------------------------------------------------------
Q 011041 191 SCSLYLVFKYMEHDLAGLAASP---------------------------------------------------------- 212 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~~---------------------------------------------------------- 212 (495)
...+|+||||+.++.+..++..
T Consensus 113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 4579999999997654433311
Q ss_pred ----------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeee
Q 011041 213 ----------------------------------------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLI 252 (495)
Q Consensus 213 ----------------------------------------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl 252 (495)
...+++..+..|+.||+.||.|||++||+||||||+|||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl 272 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI 272 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE
Confidence 1236778889999999999999999999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 011041 253 DNEGILTIADFGLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQL 330 (495)
Q Consensus 253 ~~~~~vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~ 330 (495)
+.++.+||+|||++..+..... .......+++.|+|||++.+ ..++.++|||||||++|||++ |..||......+.+
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~ 351 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN-NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQF 351 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC-CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHH
Confidence 9999999999999986532211 11223456888999998875 568999999999999999998 89999876655544
Q ss_pred HHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 331 HKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 331 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
.........+ .....++.++.+||.+||..||.+||++.++++.
T Consensus 352 ~~~~~~~~~~---------------------------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 352 YNAIKRGYRM---------------------------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHHcCCCC---------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 4332210000 0113457789999999999999999999999863
No 360
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.9e-38 Score=310.49 Aligned_cols=249 Identities=20% Similarity=0.282 Sum_probs=188.7
Q ss_pred eecccCceEEEEEEEC--CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeecc
Q 011041 125 KIGQGTYSNVYKARDT--LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYME 202 (495)
Q Consensus 125 ~LG~G~~g~Vy~a~~~--~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~ 202 (495)
.||+|+||.||+|... .....+++|.+.... .......+.+|+.+++.++|+||+++++.+.. ....|+||||+.
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~--~~~~~lv~e~~~ 78 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE--SIPYLLVLEFCP 78 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECC--CCceEEEEEeCC
Confidence 5899999999999643 244678888776432 33445667889999999999999999999876 567999999999
Q ss_pred CChhhhhhCC-----CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC-CC
Q 011041 203 HDLAGLAASP-----TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK-QP 276 (495)
Q Consensus 203 ~~l~~~~~~~-----~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~-~~ 276 (495)
++.+..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 7655544322 12356788899999999999999999999999999999999999999999999865432211 11
Q ss_pred CccccccCCCCCcccccC------CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 277 MTSRVVTLWYRPPELLLG------ATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~------~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
.....+++.|+|||++.. ...++.++|||||||++|+|++ |.+||...++.+.+..+.........
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------- 231 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLP------- 231 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCC-------
Confidence 123345778999998742 2356889999999999999999 78899888777766665432211100
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.......+++.+.+++..|+ .||.+|||++++++
T Consensus 232 ----------------~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 232 ----------------KPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ----------------CCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 00112346677788898888 59999999999986
No 361
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.2e-38 Score=310.68 Aligned_cols=251 Identities=23% Similarity=0.311 Sum_probs=201.2
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCe----EEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQ----IVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~----~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 192 (495)
.++|++++.||+|+||.||+|.++.+|. .||+|.+..... ......+.+|+.+++.++|+||+++++++.. .
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~ 81 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS---S 81 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec---C
Confidence 4789999999999999999999877665 589998765532 4455678899999999999999999999875 4
Q ss_pred eeEEEEeeccCChhh-hhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 193 SLYLVFKYMEHDLAG-LAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~-~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
..++||||+.++.+. .+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 689999999865444 4444455699999999999999999999999999999999999999999999999999987653
Q ss_pred CCCCC-CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 272 NHKQP-MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 272 ~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
..... .....++..|+|||.+.. ..++.++|||||||++|||++ |.+||.+.+..+....+.... ..
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~--------- 230 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILH-RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE-RL--------- 230 (279)
T ss_pred cccceecCCCcccccccCHHHhhc-CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC-CC---------
Confidence 32211 111223567999998764 568899999999999999998 999999887666555543210 00
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
......+..+.++|..||..||.+|||+.++++
T Consensus 231 ------------------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 231 ------------------PQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred ------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 011234567889999999999999999999875
No 362
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=4.6e-38 Score=312.56 Aligned_cols=261 Identities=19% Similarity=0.174 Sum_probs=189.4
Q ss_pred CCCeeeeeeecccCceEEEEEEECCC---CeEEEeEEEecCCCCh--HH-------HHHHHHHHHHHHhCCCCCeeeeec
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLT---GQIVALKKVRFDNLEP--ES-------VRFMAREILILRRLDHPNVVKLEG 184 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~---g~~vAiK~i~~~~~~~--~~-------~~~~~~Ei~il~~l~HpnIv~l~~ 184 (495)
.++|++.+.||+|+||.||+|++..+ +..+|+|+........ +. ......+...+..++|+||+++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 46899999999999999999998877 6778888754433211 10 011123334456678999999998
Q ss_pred eeeccCC--ceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEee
Q 011041 185 LVTSRMS--CSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIAD 262 (495)
Q Consensus 185 ~~~~~~~--~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~D 262 (495)
+...... ...+++++++...+...... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~D 169 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVENTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIID 169 (294)
T ss_pred eeeEecCCceEEEEEEehhccCHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEE
Confidence 7654321 24577888876665544332 33468899999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCC------CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh
Q 011041 263 FGLASFFDPNHK------QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKL 336 (495)
Q Consensus 263 FG~a~~~~~~~~------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~ 336 (495)
||+++.+..... .......||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.+....+....+.
T Consensus 170 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~-~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~ 248 (294)
T PHA02882 170 YGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG-ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC 248 (294)
T ss_pred cCCceeeccCCcccccccccccccCCCccccCHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHH
Confidence 999987643211 11223468999999998876 56899999999999999999999999887433222221110
Q ss_pred cCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 337 CGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
+++..... -.......++.+.++++.|+..||.+||+..++++
T Consensus 249 ------~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 249 ------DFIKRLHE---------------GKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred ------HHHHHhhh---------------hhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 11110000 00012345778999999999999999999999985
No 363
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-40 Score=330.11 Aligned_cols=239 Identities=24% Similarity=0.365 Sum_probs=198.1
Q ss_pred eeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEee
Q 011041 121 EKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKY 200 (495)
Q Consensus 121 ~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~ 200 (495)
.-++-||.|+.|.||+|+ ..++.||||+++ +.-+.+|+-|++|+|+||+.+.|++.. ...++|||||
T Consensus 127 sELeWlGSGaQGAVF~Gr--l~netVAVKKV~---------elkETdIKHLRkLkH~NII~FkGVCtq--sPcyCIiMEf 193 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGR--LHNETVAVKKVR---------ELKETDIKHLRKLKHPNIITFKGVCTQ--SPCYCIIMEF 193 (904)
T ss_pred hhhhhhccCcccceeeee--ccCceehhHHHh---------hhhhhhHHHHHhccCcceeeEeeeecC--CceeEEeeec
Confidence 335679999999999996 457899999875 222368999999999999999999987 4568999999
Q ss_pred ccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccc
Q 011041 201 MEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSR 280 (495)
Q Consensus 201 ~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~ 280 (495)
|..+-+..++..+..++......|..+|+.|+.|||.+.|||||||.-||||..+..|||+|||.++..... ....++
T Consensus 194 Ca~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSF 271 (904)
T KOG4721|consen 194 CAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSF 271 (904)
T ss_pred cccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhh
Confidence 999888888887888999999999999999999999999999999999999999999999999999876433 345678
Q ss_pred cccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCc
Q 011041 281 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQ 360 (495)
Q Consensus 281 ~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 360 (495)
+||..|||||++.. .+.+.++|||||||+|||||||..||.+-+...+ |+ ..|.-. .
T Consensus 272 aGTVaWMAPEvIrn-ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI---Iw-GVGsNs------L------------ 328 (904)
T KOG4721|consen 272 AGTVAWMAPEVIRN-EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI---IW-GVGSNS------L------------ 328 (904)
T ss_pred hhhHhhhCHHHhhc-CCcccccceehhHHHHHHHHhcCCCccccchhee---EE-eccCCc------c------------
Confidence 99999999999875 6789999999999999999999999976543322 11 111110 0
Q ss_pred ccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCC
Q 011041 361 SYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSE 402 (495)
Q Consensus 361 ~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp 402 (495)
-.......|+.++=||+.||.-.|..||+..++|.|-
T Consensus 329 -----~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 329 -----HLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred -----cccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 0111235677888899999999999999999999983
No 364
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.9e-38 Score=306.62 Aligned_cols=246 Identities=22% Similarity=0.282 Sum_probs=189.8
Q ss_pred eeecccCceEEEEEEECC---CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEee
Q 011041 124 DKIGQGTYSNVYKARDTL---TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKY 200 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~---~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~ 200 (495)
+.||+|+||.||+|.+.. .+..||||.+... ........+.+|+.+++.++||||+++++++... +...|++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS-EGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC-CCCcEEEEec
Confidence 368999999999998653 3467999987532 2344566788899999999999999999976543 4568899999
Q ss_pred ccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC---CC
Q 011041 201 MEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK---QP 276 (495)
Q Consensus 201 ~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~---~~ 276 (495)
+.++.+..+. .....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 158 (262)
T cd05058 79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHN 158 (262)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecc
Confidence 9875554443 3344577888899999999999999999999999999999999999999999999975532211 11
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
.....++..|+|||.+.+ ..++.++|||||||++|||++ |.+||...+..+....+... .+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------- 221 (262)
T cd05058 159 HTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG--RRL-------------- 221 (262)
T ss_pred cccCcCCccccChhHhcc-CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC--CCC--------------
Confidence 122345778999998865 568999999999999999999 57788776665544443221 000
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....+|+.+.+|+..||..||++||++.+++.
T Consensus 222 ------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 222 ------------LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred ------------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 001235677899999999999999999999986
No 365
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=4.6e-38 Score=307.51 Aligned_cols=251 Identities=25% Similarity=0.439 Sum_probs=202.5
Q ss_pred CeeeeeeecccCceEEEEEEECC-CCeEEEeEEEecCC--------CChHHHHHHHHHHHHHHh-CCCCCeeeeeceeec
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTL-TGQIVALKKVRFDN--------LEPESVRFMAREILILRR-LDHPNVVKLEGLVTS 188 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~-~g~~vAiK~i~~~~--------~~~~~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~ 188 (495)
.|++.+.||+|+||.||++++.. +++.+|+|.+.... ........+.+|+.++.. ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999887 78899999986432 123345567789988875 799999999999887
Q ss_pred cCCceeEEEEeeccCChhhhh----hCCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCCcEEEeec
Q 011041 189 RMSCSLYLVFKYMEHDLAGLA----ASPTIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEGILTIADF 263 (495)
Q Consensus 189 ~~~~~~~lv~e~~~~~l~~~~----~~~~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~~vkL~DF 263 (495)
+...|++|||+.++.+..+ ......+++..++.++.||+.+|.|||+ .||+|+||||+|||++.++.+||+||
T Consensus 81 --~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 --NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred --CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecc
Confidence 5689999999987544332 2344579999999999999999999996 78999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChh
Q 011041 264 GLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEE 343 (495)
Q Consensus 264 G~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~ 343 (495)
|++....... ......|+..|++||++.+ ..++.++|||||||++|+|++|.+||...+.......+......+.
T Consensus 159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-- 233 (269)
T cd08528 159 GLAKQKQPES--KLTSVVGTILYSCPEIVKN-EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL-- 233 (269)
T ss_pred cceeeccccc--ccccccCcccCcChhhhcC-CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC--
Confidence 9998765432 3345678999999999876 5589999999999999999999999987766655555433211110
Q ss_pred hhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 344 YWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
....+++++.+||.+||..||.+||++.|+..+
T Consensus 234 -------------------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 234 -------------------------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred -------------------------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 012456789999999999999999999998764
No 366
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=4.6e-39 Score=309.54 Aligned_cols=229 Identities=25% Similarity=0.318 Sum_probs=183.6
Q ss_pred cCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCChhhh
Q 011041 129 GTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHDLAGL 208 (495)
Q Consensus 129 G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~l~~~ 208 (495)
|.||.||+|+++.+|+.||+|.+.... ...+|...+....||||+++++++.+ ....|++|||+.++.+..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVS--EDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheec--CCeEEEEEecCCCCCHHH
Confidence 899999999999999999999997542 22345555566679999999999887 567999999999765555
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccccccCCCCC
Q 011041 209 AASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVVTLWYRP 288 (495)
Q Consensus 209 ~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~a 288 (495)
.......+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++...... .....++..|+|
T Consensus 75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~a 150 (237)
T cd05576 75 HISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYCA 150 (237)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccccC
Confidence 4444456999999999999999999999999999999999999999999999999988655432 233456778999
Q ss_pred cccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCccccccccc
Q 011041 289 PELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAE 368 (495)
Q Consensus 289 PE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (495)
||.+.+ ..++.++||||+||++|+|++|.+||...... + .. .. ...
T Consensus 151 PE~~~~-~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~------------~~---------~~-------~~~ 196 (237)
T cd05576 151 PEVGGI-SEETEACDWWSLGAILFELLTGKTLVECHPSG-----I------------NT---------HT-------TLN 196 (237)
T ss_pred CcccCC-CCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c------------cc---------cc-------ccC
Confidence 998765 46789999999999999999999887532110 0 00 00 001
Q ss_pred ccCCCCCCcHHHHHHhccCCCCCccCH-----HHHHhCCCC
Q 011041 369 TFKDFPPSSLPLIETLLAIDPAERQTA-----TAALRSEFF 404 (495)
Q Consensus 369 ~~~~~s~~~~~Li~~~L~~dP~~R~ta-----~elL~hp~f 404 (495)
....+++.+.+||.+||+.||.+|+|+ ++++.||||
T Consensus 197 ~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 197 IPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 123467788999999999999999996 999999998
No 367
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.1e-38 Score=309.24 Aligned_cols=253 Identities=19% Similarity=0.275 Sum_probs=198.0
Q ss_pred eeeeeeecccCceEEEEEEEC---CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC----c
Q 011041 120 FEKLDKIGQGTYSNVYKARDT---LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS----C 192 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~---~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~----~ 192 (495)
|.+.+.||+|+||.||+|.+. .++..||||++..........+.+.+|+.+++.++||||+++++++..... .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567889999999999999864 357899999997665555566778899999999999999999998765321 1
Q ss_pred eeEEEEeeccCChhhhhh-C-----CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccc
Q 011041 193 SLYLVFKYMEHDLAGLAA-S-----PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLA 266 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~-~-----~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a 266 (495)
..+++++|+.++.+.... . ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 347888999866543322 1 1225789999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhh
Q 011041 267 SFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEY 344 (495)
Q Consensus 267 ~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~ 344 (495)
........ .......+++.|++||.+.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+.... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~---- 234 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLAD-NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN-RL---- 234 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhc-CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC-cC----
Confidence 86533221 11122345678999998765 467889999999999999999 899998877666555443210 00
Q ss_pred hhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 345 WKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
.....+++.+.+|+..||..+|.+||++.+++++
T Consensus 235 -----------------------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 235 -----------------------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred -----------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0012456788999999999999999999999863
No 368
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=6e-38 Score=307.03 Aligned_cols=250 Identities=18% Similarity=0.213 Sum_probs=187.7
Q ss_pred eeecccCceEEEEEEEC--CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDT--LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~--~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
+.||+|+||.||+|... .++..+|+|.++.... ......+.+|+.+++.++||||+++++++.+ ...+|+||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE--VTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC--CCCcEEEEECC
Confidence 35899999999999754 4567899998876543 2334567889999999999999999999876 45689999999
Q ss_pred cCChhhhhhC-----CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC-C
Q 011041 202 EHDLAGLAAS-----PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK-Q 275 (495)
Q Consensus 202 ~~~l~~~~~~-----~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~-~ 275 (495)
.++.+..++. ....+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++........ .
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9765544332 123467778889999999999999999999999999999999999999999999875432211 1
Q ss_pred CCccccccCCCCCcccccCC------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhC
Q 011041 276 PMTSRVVTLWYRPPELLLGA------TDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~------~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 348 (495)
......+++.|+|||++.+. ..++.++|||||||++|||++ |.+||...+..+............
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-------- 229 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLK-------- 229 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCC--------
Confidence 11234568889999988532 135789999999999999996 999998776655443322110000
Q ss_pred CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 349 KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.+ .......+++.+.+|+..|+ .||.+|||+.++++
T Consensus 230 -~~--------------~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 230 -LP--------------KPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred -CC--------------CCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 00 00011235567888999998 69999999999985
No 369
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=5.8e-38 Score=313.05 Aligned_cols=252 Identities=20% Similarity=0.298 Sum_probs=197.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCe----EEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQ----IVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~----~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 192 (495)
.++|+..+.||+|+||.||+|++..+|. .||+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--- 81 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP--- 81 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC---
Confidence 4789999999999999999999887776 46888876443 233344678899999999999999999988652
Q ss_pred eeEEEEeeccCC-hhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 193 SLYLVFKYMEHD-LAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 193 ~~~lv~e~~~~~-l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
..++++||+.++ +...+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+..
T Consensus 82 ~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 82 TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccC
Confidence 467899999865 4444444455689999999999999999999999999999999999999999999999999987643
Q ss_pred CCCC-CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 272 NHKQ-PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 272 ~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
.... ......++..|+|||++.+ ..++.++|||||||++|||++ |..||.+....+....+ .....++
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~-------- 231 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIHY-RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL-EKGERLP-------- 231 (303)
T ss_pred cccccccCCCccccccCCHHHhcc-CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HCCCCCC--------
Confidence 3221 1122345778999998865 568999999999999999997 89999876544433222 2110000
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
.....+..+.++|..|+..||++||++.++++.
T Consensus 232 -------------------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 232 -------------------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred -------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 012245678899999999999999999998863
No 370
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=4.7e-38 Score=305.16 Aligned_cols=236 Identities=21% Similarity=0.264 Sum_probs=186.4
Q ss_pred eeecccCceEEEEEEECCCC----------eEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 124 DKIGQGTYSNVYKARDTLTG----------QIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g----------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
+.||+|+||.||+|.+..++ ..|++|.+..... ....+.+|+.+|+.++||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---DSLAFFETASLMSQLSHKHLVKLYGVCVR---DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh---hHHHHHHHHHHHHcCCCcchhheeeEEec---CC
Confidence 36999999999999998777 3578887654321 15678899999999999999999998876 34
Q ss_pred eEEEEeeccCChhhhhhCCCC-CCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC-------cEEEeeccc
Q 011041 194 LYLVFKYMEHDLAGLAASPTI-KFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG-------ILTIADFGL 265 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~~~-~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~-------~vkL~DFG~ 265 (495)
.++||||+.++.+..+..... .+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 799999999877665554333 789999999999999999999999999999999999999887 799999999
Q ss_pred ccccCCCCCCCCccccccCCCCCcccccCC-CCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChh
Q 011041 266 ASFFDPNHKQPMTSRVVTLWYRPPELLLGA-TDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEE 343 (495)
Q Consensus 266 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~ 343 (495)
+..... .....++..|+|||++.+. ..++.++|||||||++|+|++ |..||...+..+....... ..
T Consensus 155 a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~-~~----- 223 (259)
T cd05037 155 PITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD-QH----- 223 (259)
T ss_pred cccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc-CC-----
Confidence 976543 1234567789999998764 368899999999999999999 5778876653332222110 00
Q ss_pred hhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 344 YWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.........+.+||.+||..||.+|||+.++++
T Consensus 224 ------------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 224 ------------------------RLPMPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred ------------------------CCCCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 000011267889999999999999999999986
No 371
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4.4e-38 Score=307.51 Aligned_cols=244 Identities=23% Similarity=0.334 Sum_probs=192.4
Q ss_pred eecccCceEEEEEEECCCC------eEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 125 KIGQGTYSNVYKARDTLTG------QIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 125 ~LG~G~~g~Vy~a~~~~~g------~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
.||+|+||.||+|++.... ..||||.+.... .......+.+|+.+++.++||||+++++++.. ....|+||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 78 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL--NEPQYIIM 78 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecC--CCCeEEEE
Confidence 6899999999999876544 789999886542 23345678889999999999999999999876 45799999
Q ss_pred eeccCChhhhhhC-------CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC-----cEEEeecccc
Q 011041 199 KYMEHDLAGLAAS-------PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG-----ILTIADFGLA 266 (495)
Q Consensus 199 e~~~~~l~~~~~~-------~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~-----~vkL~DFG~a 266 (495)
||+.++.+..... ....+++..+..++.||+.||.|||+++++|+||||+|||++.++ .++|+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 9998654443322 223478999999999999999999999999999999999999877 8999999998
Q ss_pred cccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhh
Q 011041 267 SFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEY 344 (495)
Q Consensus 267 ~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~ 344 (495)
........ .......++..|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+....+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~------- 230 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLD-GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG------- 230 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHcc-CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC-------
Confidence 75532211 11123345778999998875 568999999999999999998 999998877766555442110
Q ss_pred hhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 345 WKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.......+|..+.+||.+||..||.+||++.++++
T Consensus 231 ---------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 231 ---------------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred ---------------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00112346678899999999999999999999975
No 372
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=6e-38 Score=304.28 Aligned_cols=242 Identities=22% Similarity=0.383 Sum_probs=195.2
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|++.+.||+|+||.||++. .+++.||+|++.... ....+.+|+.+++.++||||+++++++.. ...|+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---~~~~~ 75 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILH---NGLYI 75 (254)
T ss_pred HHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcC---CCcEE
Confidence 3679999999999999999985 578899999986432 23567889999999999999999998865 24799
Q ss_pred EEeeccCChh-hhhhCC-CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEHDLA-GLAASP-TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~~l~-~~~~~~-~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
+|||+.++.+ ..+... ...+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++......
T Consensus 76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-- 153 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG-- 153 (254)
T ss_pred EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc--
Confidence 9999986544 444332 335899999999999999999999999999999999999999999999999998754321
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHA 353 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 353 (495)
......+..|+|||.+.+ ..++.++|+|||||++|+|++ |.+||.+.+..+....+.+...
T Consensus 154 --~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--------------- 215 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKH-KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYR--------------- 215 (254)
T ss_pred --CCCCCCCceecCHHHhcc-CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCC---------------
Confidence 122234567999998865 568899999999999999997 9999988876665554432100
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
......+++.+.+||.+||..||.+||++.+++.
T Consensus 216 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 216 -------------MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred -------------CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0011346778899999999999999999999985
No 373
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-38 Score=318.46 Aligned_cols=257 Identities=25% Similarity=0.338 Sum_probs=191.3
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
+.|..-..||+|+||.||+|.... |..||||.+....... ...|.+|+.+|.+++|||+|+|+|||.+... ..+||
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~-~~~LV 150 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGGE-HRLLV 150 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCCc-eEEEE
Confidence 667777899999999999998554 4899999876554322 3449999999999999999999999987422 59999
Q ss_pred EeeccCChhhhhhC-CCC-CCCHHHHHHHHHHHHHHHHHhhhCC---ceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 198 FKYMEHDLAGLAAS-PTI-KFTQAQVKCYMHQLLSGLEHCHNQH---VLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 198 ~e~~~~~l~~~~~~-~~~-~l~e~~~~~i~~qil~~L~~LH~~g---ivHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
+|||..+.+...+. ... .+++.....|+.+++.||+|||+.. |||||||++|||||++++.||+|||+|......
T Consensus 151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~ 230 (361)
T KOG1187|consen 151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG 230 (361)
T ss_pred EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc
Confidence 99999766655544 333 8999999999999999999999754 999999999999999999999999999654331
Q ss_pred CCCCCccc-cccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHhcCCCChhhhhhC
Q 011041 273 HKQPMTSR-VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRT---EVEQLHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 273 ~~~~~~~~-~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~---~~~~~~~i~~~~g~~~~~~~~~~ 348 (495)
....... .||.+|+|||.+.. ...+.++|||||||+|+||++|+.+..... +.....-.........-..|
T Consensus 231 -~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~ei--- 305 (361)
T KOG1187|consen 231 -DTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREI--- 305 (361)
T ss_pred -ccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhhe---
Confidence 1222222 79999999998865 568999999999999999999998877532 11111111111101000000
Q ss_pred CCCCCccCCCCccccccccccc--CCCC-----CCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 349 KLPHATIFKPQQSYKRCIAETF--KDFP-----PSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~--~~~s-----~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
+...+ ..++ ..+..+...|++.+|.+||++.|+++
T Consensus 306 -----------------iD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 306 -----------------VDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred -----------------eCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 11111 1111 12566889999999999999999765
No 374
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=7.2e-38 Score=308.01 Aligned_cols=257 Identities=22% Similarity=0.351 Sum_probs=198.5
Q ss_pred CCeeeeeeecccCceEEEEEEEC----CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDT----LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
.+|++.+.||+|+||.||+|+.. .++..||+|++...... .....+.+|+.+++.+.|+||+++++++.......
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 57889999999999999999864 34889999999765433 45678899999999999999999999987755667
Q ss_pred eEEEEeeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 194 LYLVFKYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
.+++|||+.++.+..+. .....+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPED 162 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccC
Confidence 99999999865444443 43446999999999999999999999999999999999999999999999999999876532
Q ss_pred CCCC--CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-----------HHHHHHhcCC
Q 011041 273 HKQP--MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQ-----------LHKIFKLCGS 339 (495)
Q Consensus 273 ~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~-----------~~~i~~~~g~ 339 (495)
.... .....++..|++||.+.+ ..++.++|||||||++|+|++|..||........ ...+...+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05038 163 KDYYYVKEPGESPIFWYAPECLRT-SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE 241 (284)
T ss_pred CcceeccCCCCCcccccCcHHHcc-CCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHc
Confidence 2111 112234567999998865 4688999999999999999999998865432210 1111110000
Q ss_pred CChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 340 PSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.. .......++.++.+|+.+||..||.+|||+.++++
T Consensus 242 ~~------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 242 GE------------------------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred CC------------------------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00 00011235677899999999999999999999986
No 375
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-39 Score=317.42 Aligned_cols=265 Identities=24% Similarity=0.376 Sum_probs=214.6
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-----ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-----EPESVRFMAREILILRRLDHPNVVKLEGLVTSRM 190 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 190 (495)
..++|-++.+||+|+|+.||+|.|....++||+|+-..... .....+...+|..|.+.|+||-||++|++|.-.
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD- 539 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD- 539 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec-
Confidence 35789999999999999999999999999999998654332 233455677999999999999999999999754
Q ss_pred CceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhC--CceeccCCCCCeeeCC---CCcEEEeeccc
Q 011041 191 SCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQ--HVLHRDIKGSNLLIDN---EGILTIADFGL 265 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~--givHrDlKp~NILl~~---~~~vkL~DFG~ 265 (495)
...+|-|+|||+|..+++++....-++|.+++.|+.||+.||.||.+. .|||-||||.||||.. .|.+||+|||+
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 467899999999988888888888899999999999999999999965 5999999999999954 47899999999
Q ss_pred ccccCCCCCCC------CccccccCCCCCcccccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHH--H
Q 011041 266 ASFFDPNHKQP------MTSRVVTLWYRPPELLLG---ATDYGVGVDLWSAGCILAELLAEKPIMPGRTEV-EQLHK--I 333 (495)
Q Consensus 266 a~~~~~~~~~~------~~~~~gt~~y~aPE~l~~---~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~-~~~~~--i 333 (495)
+++++...... .....||.||++||.+.- ....+.++||||+|||+|..+.|+.||...... +++.. |
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTI 699 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTI 699 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhch
Confidence 99886543321 233578999999998843 235788999999999999999999999765433 33322 1
Q ss_pred HHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 334 FKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 334 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
++. .....|. -+.+++++++||++||.+--++|....++-.||||.-+
T Consensus 700 lkA----------------tEVqFP~----------KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh 747 (775)
T KOG1151|consen 700 LKA----------------TEVQFPP----------KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH 747 (775)
T ss_pred hcc----------------eeccCCC----------CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence 110 0001111 13477899999999999999999999999999999753
No 376
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.7e-37 Score=302.55 Aligned_cols=249 Identities=18% Similarity=0.260 Sum_probs=187.5
Q ss_pred eecccCceEEEEEEECCC--CeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeecc
Q 011041 125 KIGQGTYSNVYKARDTLT--GQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYME 202 (495)
Q Consensus 125 ~LG~G~~g~Vy~a~~~~~--g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~ 202 (495)
.||+|+||.||++..... ...+++|.+.... .......+.+|+.+++.++||||+++++++.+ ....|+||||+.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVE--AIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecC--CCccEEEEecCC
Confidence 599999999999975433 2456677765433 23445678899999999999999999999887 467899999999
Q ss_pred CChhhhhhCC----CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCC-CCCC
Q 011041 203 HDLAGLAASP----TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNH-KQPM 277 (495)
Q Consensus 203 ~~l~~~~~~~----~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~-~~~~ 277 (495)
++.+..+... ...+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||++....... ....
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 7555443322 2346778888999999999999999999999999999999999999999999986432111 1122
Q ss_pred ccccccCCCCCcccccCC------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 278 TSRVVTLWYRPPELLLGA------TDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~------~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
...+++..|+|||++... ..++.++|||||||++|||++ |.+||...++.+.+..+.+..... .+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~----- 230 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVK---LF----- 230 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccc---cC-----
Confidence 345678899999987431 235778999999999999996 678898877777776654321110 00
Q ss_pred CCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 351 PHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
. ......+++.+.+||..|+ .||.+|||+.++++
T Consensus 231 ------~---------~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 231 ------K---------PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred ------C---------CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 0 0111235677888999999 68999999999975
No 377
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-38 Score=335.30 Aligned_cols=251 Identities=23% Similarity=0.367 Sum_probs=208.4
Q ss_pred CCCeeeeeeecccCceEEEEEEEC-----CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDT-----LTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
..+.+..+.||+|+||.||+|+-. .....||||.++... +.....+|+||+.+|..|+|||||+|+|++.. +
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~--~ 561 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCRE--G 561 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc--C
Confidence 356677889999999999999753 234689999987543 44567899999999999999999999999987 5
Q ss_pred ceeEEEEeeccCChhhhhh-C---------CCC----CCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCc
Q 011041 192 CSLYLVFKYMEHDLAGLAA-S---------PTI----KFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGI 257 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~-~---------~~~----~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~ 257 (495)
..+|||||||.++.+..++ . .+. .|+..+...|+.||+.|++||-++.+|||||-..|+||.++..
T Consensus 562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLV 641 (774)
T ss_pred CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceE
Confidence 6799999999976554332 1 112 3889999999999999999999999999999999999999999
Q ss_pred EEEeecccccccCCCCC-CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 011041 258 LTIADFGLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFK 335 (495)
Q Consensus 258 vkL~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~ 335 (495)
|||+|||+++.+-..+. .......-...||+||.|+- ..|+.++||||+||+|+|+++ |+.||.|-+++++++.|..
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly-~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~ 720 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY-GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRA 720 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhc-CcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHc
Confidence 99999999985532222 22223344678999999986 579999999999999999997 9999999999999998864
Q ss_pred hcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHH
Q 011041 336 LCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAAL 399 (495)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL 399 (495)
.- +.....+.|.++++|+..|++.+|.+||+..||=
T Consensus 721 g~----------------------------lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 721 GQ----------------------------LLSCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred CC----------------------------cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 21 3344567899999999999999999999999873
No 378
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=327.84 Aligned_cols=203 Identities=30% Similarity=0.459 Sum_probs=175.0
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC----Cce
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM----SCS 193 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~----~~~ 193 (495)
..|..-+.||+|+||.||+++++.+|+.||||.++... .....+.+-+|+++|++|+|+|||++.++-+... ...
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence 44667788999999999999999999999999998654 3345567889999999999999999998876655 456
Q ss_pred eEEEEeeccCChhhhhhC---CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC--CC--cEEEeecccc
Q 011041 194 LYLVFKYMEHDLAGLAAS---PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN--EG--ILTIADFGLA 266 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~---~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~--~~--~vkL~DFG~a 266 (495)
-.+|||||.++.+...+. +...|+|.+...++..+..||.|||++|||||||||+||++-. +| .-||+|||.|
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 789999999876655543 2446999999999999999999999999999999999999843 34 4799999999
Q ss_pred cccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 011041 267 SFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPG 323 (495)
Q Consensus 267 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~ 323 (495)
+..+.+ ..+.+.+||+.|.+||++.....|+..+|.|||||++|+++||..||-.
T Consensus 172 rel~d~--s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 172 RELDDN--SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred ccCCCC--CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 988655 4788999999999999987557899999999999999999999999864
No 379
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=300.87 Aligned_cols=262 Identities=23% Similarity=0.369 Sum_probs=208.8
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHH-HhCCCCCeeeeeceeeccCCceeE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILIL-RRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il-~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
.++.+-+..||.|+||+|++..++.+|+..|||.|+......+ ..++..|.... +.-+.||||++||.... ++..|
T Consensus 63 ~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~ke-q~rll~e~d~~mks~~cp~IVkfyGa~F~--EGdcW 139 (361)
T KOG1006|consen 63 SDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKE-QKRLLMEHDTVMKSSNCPNIVKFYGALFS--EGDCW 139 (361)
T ss_pred cchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHH-HHHHHHHHHHHHhhcCCcHHHHHhhhhhc--CCcee
Confidence 3566677889999999999999999999999999998765444 45566666654 44589999999998876 45689
Q ss_pred EEEeeccCChhhhhh----CCCCCCCHHHHHHHHHHHHHHHHHhh-hCCceeccCCCCCeeeCCCCcEEEeecccccccC
Q 011041 196 LVFKYMEHDLAGLAA----SPTIKFTQAQVKCYMHQLLSGLEHCH-NQHVLHRDIKGSNLLIDNEGILTIADFGLASFFD 270 (495)
Q Consensus 196 lv~e~~~~~l~~~~~----~~~~~l~e~~~~~i~~qil~~L~~LH-~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~ 270 (495)
|-||+|+-++..++. -....++|.-+..|...++.||+||- +..||||||||+||||+..|.|||||||++..+.
T Consensus 140 iCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 140 ICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV 219 (361)
T ss_pred eeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHH
Confidence 999999987665543 24557999999999999999999998 5689999999999999999999999999987654
Q ss_pred CCCCCCCccccccCCCCCcccccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCChhhhhhC
Q 011041 271 PNHKQPMTSRVVTLWYRPPELLLGAT-DYGVGVDLWSAGCILAELLAEKPIMPGRTE-VEQLHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 271 ~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DvwSlGvil~elltG~~pf~~~~~-~~~~~~i~~~~g~~~~~~~~~~ 348 (495)
.. -..+.-.|-..|||||.+.... .|+.++||||||++|||+.||.-|+.+-+. .+++..+. .|.|+.-..
T Consensus 220 ~S--iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv--~gdpp~l~~--- 292 (361)
T KOG1006|consen 220 DS--IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV--IGDPPILLF--- 292 (361)
T ss_pred HH--HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH--cCCCCeecC---
Confidence 32 2234457888999999996543 499999999999999999999999987443 35555443 244432111
Q ss_pred CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 349 KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
....-.++..+..+|..||.+|-..||...+++.+||+..
T Consensus 293 ------------------~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~ 332 (361)
T KOG1006|consen 293 ------------------DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRM 332 (361)
T ss_pred ------------------cccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhh
Confidence 1112347788999999999999999999999999999975
No 380
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=327.67 Aligned_cols=263 Identities=27% Similarity=0.434 Sum_probs=216.8
Q ss_pred CCCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeec---c
Q 011041 114 PRRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTS---R 189 (495)
Q Consensus 114 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~---~ 189 (495)
+...+.|++.+.||.|.+|.||+++++.+|+.+|+|+...+.- ..+.++-|..||+.+ +|||++.++++|.. .
T Consensus 15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d---~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~ 91 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED---EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPG 91 (953)
T ss_pred CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc---ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCC
Confidence 3446889999999999999999999999999999999876543 234466788999988 69999999998853 2
Q ss_pred CCceeEEEEeeccCChhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeeccccc
Q 011041 190 MSCSLYLVFKYMEHDLAGLAASP--TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLAS 267 (495)
Q Consensus 190 ~~~~~~lv~e~~~~~l~~~~~~~--~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~ 267 (495)
.++.+|||||||.+|...++... +..+.|..+..|++.++.||.+||.+.++|||||-.|||++.++.|||+|||.+.
T Consensus 92 ~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSa 171 (953)
T KOG0587|consen 92 NGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSA 171 (953)
T ss_pred CCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeee
Confidence 35689999999998866655432 5679999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCCccccccCCCCCcccccCC----CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChh
Q 011041 268 FFDPNHKQPMTSRVVTLWYRPPELLLGA----TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEE 343 (495)
Q Consensus 268 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~ 343 (495)
..+.. .....+.+|||.|||||++... ..|+..+|+||||++..||.-|.||+.+.-+.-.+.+| .-.|++.
T Consensus 172 QldsT-~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I---pRNPPPk 247 (953)
T KOG0587|consen 172 QLDST-VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI---PRNPPPK 247 (953)
T ss_pred eeecc-cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC---CCCCCcc
Confidence 77643 3445677999999999998532 34788999999999999999999999876665554443 3333322
Q ss_pred hhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 344 YWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
. ......+.++.+||..||.+|-.+||+..++|+|||++.
T Consensus 248 L-----------------------krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 248 L-----------------------KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred c-----------------------cchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 1 112345677888999999999999999999999999983
No 381
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=319.29 Aligned_cols=253 Identities=24% Similarity=0.352 Sum_probs=206.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCe---E-EEeEEEecCC-CChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQ---I-VALKKVRFDN-LEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~---~-vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
.++-.+.++||+|+||.||+|+.+..+. . ||+|...... ...+....+.+|+++|+.++|||||++||+... .
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~--~ 233 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL--E 233 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC--C
Confidence 3555667899999999999998765432 3 8999988633 567888899999999999999999999999987 4
Q ss_pred ceeEEEEeeccCChhhhhhCCCC-CCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccC
Q 011041 192 CSLYLVFKYMEHDLAGLAASPTI-KFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFD 270 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~~~-~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~ 270 (495)
.-+|||||+|.|+.+..++.... .++..+...++.+.+.||+|||++++|||||-..|+|++.++.+||+|||+++...
T Consensus 234 ~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 234 EPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS 313 (474)
T ss_pred CccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence 56999999999876666665544 69999999999999999999999999999999999999999999999999987543
Q ss_pred CCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 271 PNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 271 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
. .............|+|||.+.. .-|+.++|||||||++||+++ |..||.+.+..+...+|.......+
T Consensus 314 ~-~~~~~~~~klPirWLAPEtl~~-~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~-------- 383 (474)
T KOG0194|consen 314 Q-YVMKKFLKKLPIRWLAPETLNT-GIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMP-------- 383 (474)
T ss_pred c-eeeccccccCcceecChhhhcc-CccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCC--------
Confidence 1 1111111124567999999876 479999999999999999998 8899999999999888854221111
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
....-|.++..++..|+..||++|+|+.++.+
T Consensus 384 -------------------~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 384 -------------------IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred -------------------CCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 11234567788999999999999999998875
No 382
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-37 Score=332.72 Aligned_cols=253 Identities=23% Similarity=0.383 Sum_probs=206.9
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCC-----eEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTG-----QIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRM 190 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g-----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~ 190 (495)
....-++++.||+|+||.||.|.-.... ..||||.+.+.. +......|.+|+.+|..++|||||+++|++.+
T Consensus 690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~-- 766 (1025)
T KOG1095|consen 690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD-- 766 (1025)
T ss_pred ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCcceeeEEEeecC--
Confidence 3466788899999999999999865332 348999887543 55667789999999999999999999999988
Q ss_pred CceeEEEEeeccCC-hhhhhhCC------CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeec
Q 011041 191 SCSLYLVFKYMEHD-LAGLAASP------TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADF 263 (495)
Q Consensus 191 ~~~~~lv~e~~~~~-l~~~~~~~------~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DF 263 (495)
....+|++|||+++ |+..+... ...++..+...++.||+.|+.||+++++|||||-..|+||+....|||+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEccc
Confidence 56789999999965 55555554 456899999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCccc-cccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCC
Q 011041 264 GLASFFDPNHKQPMTSR-VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPS 341 (495)
Q Consensus 264 G~a~~~~~~~~~~~~~~-~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~ 341 (495)
|+|+.+-.......... .-...|||||.+.. ..++.++|||||||+|||+++ |..||.+.++.+++.-.++.- ..
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL- 923 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKD-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RL- 923 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhh-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-cc-
Confidence 99994322211111111 22356999999986 679999999999999999998 999999999999887655422 11
Q ss_pred hhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 342 EEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
+....+|..+++|+..|++.||++||+...+++
T Consensus 924 --------------------------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 924 --------------------------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred --------------------------CCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 122457888999999999999999999999987
No 383
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.4e-36 Score=315.11 Aligned_cols=275 Identities=24% Similarity=0.309 Sum_probs=188.2
Q ss_pred CCCCeeeeeeecccCceEEEEEEEC----------------CCCeEEEeEEEecCCCCh------------HHHHHHHHH
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDT----------------LTGQIVALKKVRFDNLEP------------ESVRFMARE 167 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~----------------~~g~~vAiK~i~~~~~~~------------~~~~~~~~E 167 (495)
..++|.+.++||+|+||+||+|.+. ..++.||||.+....... ...+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4689999999999999999999752 345679999986542110 011223457
Q ss_pred HHHHHhCCCCCe-----eeeeceeecc------CCceeEEEEeeccCChhhhhhCC------------------------
Q 011041 168 ILILRRLDHPNV-----VKLEGLVTSR------MSCSLYLVFKYMEHDLAGLAASP------------------------ 212 (495)
Q Consensus 168 i~il~~l~HpnI-----v~l~~~~~~~------~~~~~~lv~e~~~~~l~~~~~~~------------------------ 212 (495)
+.++.+++|.++ +++++++... .....||||||+.++.+..++..
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777788866654 6677776531 12468999999997655443321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccccccCCCCCcccc
Q 011041 213 TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVVTLWYRPPELL 292 (495)
Q Consensus 213 ~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l 292 (495)
...+++..++.++.||+.+|.|||+++|+||||||+|||++.++.+||+|||++...............+|+.|+|||++
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l 382 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEEL 382 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhh
Confidence 11245678899999999999999999999999999999999999999999999976543322111222448999999987
Q ss_pred cCCCC-------------------CC--chhhHHHHHHHHHHHHhCCC-CCCCCChHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 293 LGATD-------------------YG--VGVDLWSAGCILAELLAEKP-IMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 293 ~~~~~-------------------~~--~~~DvwSlGvil~elltG~~-pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
..... |+ ...||||+|||+|+|++|.. ||.+...... .++.. ......|.....
T Consensus 383 ~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~---~~~~~-~~~~~~~r~~~~ 458 (507)
T PLN03224 383 VMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNT---ELRQY-DNDLNRWRMYKG 458 (507)
T ss_pred cCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhh---HHhhc-cchHHHHHhhcc
Confidence 54211 22 24799999999999999875 6654322111 11110 111122322110
Q ss_pred CCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCC---CCccCHHHHHhCCCCCC
Q 011041 351 PHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDP---AERQTATAALRSEFFTT 406 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP---~~R~ta~elL~hp~f~~ 406 (495)
.. + ....+..+++.+.|||.+||..+| .+|+|+.|+|+||||..
T Consensus 459 ~~---------~---~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 459 QK---------Y---DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred cC---------C---CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 00 0 011244578899999999999876 68999999999999964
No 384
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=1.7e-35 Score=282.48 Aligned_cols=243 Identities=38% Similarity=0.597 Sum_probs=196.6
Q ss_pred CceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCChhhhh
Q 011041 130 TYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHDLAGLA 209 (495)
Q Consensus 130 ~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~ 209 (495)
+||.||+|++..+|+.|++|++........ ...+.+|+.+++.++|+||+++++++.. ....+++|||+.++.+..+
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFED--EDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheee--CCEEEEEEeCCCCCCHHHH
Confidence 589999999999999999999876543221 5788899999999999999999999887 4679999999998544444
Q ss_pred hCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccccccCCCCCc
Q 011041 210 ASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVVTLWYRPP 289 (495)
Q Consensus 210 ~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aP 289 (495)
......+++..+..++.+|+.+|.|||+.||+|+||+|.||+++.++.++|+|||++....... ......++..|++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~p 155 (244)
T smart00220 78 LKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYMAP 155 (244)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCCCH
Confidence 4333348999999999999999999999999999999999999999999999999998765432 23455788899999
Q ss_pred ccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhcCCCChhhhhhCCCCCCccCCCCccccccccc
Q 011041 290 ELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEV-EQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAE 368 (495)
Q Consensus 290 E~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (495)
|.+.+ ..++.++||||||+++|+|++|..||...... .....+........ .
T Consensus 156 E~~~~-~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~ 208 (244)
T smart00220 156 EVLLG-KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFP--------------------------P 208 (244)
T ss_pred HHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCc--------------------------c
Confidence 98865 56788999999999999999999999874333 33333221111100 0
Q ss_pred ccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 369 TFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 369 ~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
....++.++.+++.+||..||.+||++.++++||||
T Consensus 209 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 209 PEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred ccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 011166788999999999999999999999999997
No 385
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=8.2e-37 Score=299.21 Aligned_cols=281 Identities=32% Similarity=0.521 Sum_probs=215.9
Q ss_pred CCCeeeeeeecccCceEEEEEEECC---CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTL---TGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~---~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~ 192 (495)
.+.|..+++||+|+|++||++++.. ..+.||+|.|.... ....+.+|+++|..+ .+.||+++.+++.. +.
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts----~p~ri~~El~~L~~~gG~~ni~~~~~~~rn--nd 108 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS----SPSRILNELEMLYRLGGSDNIIKLNGCFRN--ND 108 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc----CchHHHHHHHHHHHhccchhhhcchhhhcc--CC
Confidence 4679999999999999999999887 78899999987543 235688999999999 59999999999977 56
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC-CCcEEEeecccccccCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN-EGILTIADFGLASFFDP 271 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~-~~~vkL~DFG~a~~~~~ 271 (495)
.+.+||||++++....+.. .++..+++.|++.++.||.++|.+|||||||||.|+|.+. .+.-.|+|||+|...+.
T Consensus 109 ~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred eeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHh
Confidence 8999999999977666554 4678999999999999999999999999999999999986 57889999999973211
Q ss_pred CC-------------------------------------------CCCCccccccCCCCCcccccCCCCCCchhhHHHHH
Q 011041 272 NH-------------------------------------------KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAG 308 (495)
Q Consensus 272 ~~-------------------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlG 308 (495)
.. .....+..||++|+|||++.....-+.++||||.|
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G 265 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG 265 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence 00 00012457899999999999888889999999999
Q ss_pred HHHHHHHhCCCCCC-CCChHHHHHHHHHhcCCCC--------hh--hhhhCCCCCCc----cCCCC--cccc-----ccc
Q 011041 309 CILAELLAEKPIMP-GRTEVEQLHKIFKLCGSPS--------EE--YWKKSKLPHAT----IFKPQ--QSYK-----RCI 366 (495)
Q Consensus 309 vil~elltG~~pf~-~~~~~~~~~~i~~~~g~~~--------~~--~~~~~~~~~~~----~~~~~--~~~~-----~~~ 366 (495)
||+.-++++..||. ..++.+.+..|..+.|.-. .. .|.+...+... .|... ..+. .+.
T Consensus 266 VI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~ 345 (418)
T KOG1167|consen 266 VILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTE 345 (418)
T ss_pred ceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccccee
Confidence 99999999987765 4666677777766665432 11 33322211000 00000 0011 122
Q ss_pred ccccCC-CCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 367 AETFKD-FPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 367 ~~~~~~-~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.+...+ ++..+.+|+++||..||.+|.||+++|+||||..
T Consensus 346 ~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 346 REIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred eccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 233333 3458999999999999999999999999999983
No 386
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=298.15 Aligned_cols=257 Identities=21% Similarity=0.283 Sum_probs=203.1
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
+...+.++||+|.||.|.+|. ...+..||+|+++.+. .......|.+||++|.+|+|||||+|+|++.. +..++|+
T Consensus 538 s~L~~~ekiGeGqFGEVhLCe-veg~lkVAVK~Lr~~a-~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~--DePicmI 613 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCE-VEGPLKVAVKILRPDA-TKNARNDFLKEIKILSRLKHPNIVELLGVCVQ--DDPLCMI 613 (807)
T ss_pred hheehhhhhcCcccceeEEEE-ecCceEEEEeecCccc-chhHHHHHHHHHHHHhccCCCCeeEEEeeeec--CCchHHH
Confidence 567888999999999999997 4446899999998654 34445789999999999999999999999987 5679999
Q ss_pred EeeccCChhhhhhCCC-C-CCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC-
Q 011041 198 FKYMEHDLAGLAASPT-I-KFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK- 274 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~-~-~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~- 274 (495)
+|||+.+.+..++... . .+.......|+.||+.|++||.+.++|||||.+.|+|++.++++||+|||+++.+-.+..
T Consensus 614 ~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 614 TEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred HHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCce
Confidence 9999976555444322 1 234455667999999999999999999999999999999999999999999985533322
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL--AEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ell--tG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
......+-...|||+|.++- ..++.++|+|+||+++||++ |...||...++.+..++....+......
T Consensus 694 ~vqgr~vlpiRwmawEsill-gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~--------- 763 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQ--------- 763 (807)
T ss_pred eeecceeeeeeehhHHHHHh-ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcc---------
Confidence 22223355788999999875 57899999999999999986 5788998888777766654433222211
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
........+|..+.+||.+|+..|-.+||+.+++-.
T Consensus 764 ------------~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 764 ------------VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred ------------eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 012223557888999999999999999999999854
No 387
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=300.47 Aligned_cols=245 Identities=21% Similarity=0.348 Sum_probs=200.3
Q ss_pred eeeeecccCceEEEEEEECCC----CeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 122 KLDKIGQGTYSNVYKARDTLT----GQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 122 ~~~~LG~G~~g~Vy~a~~~~~----g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
+.+.||.|.||.||+|....- .-.||||..+.+. ..+..+.|..|+.+|+.++|||||+|+|++.+ ...|||
T Consensus 393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekflqEa~iMrnfdHphIikLIGv~~e---~P~Wiv 468 (974)
T KOG4257|consen 393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE---QPMWIV 468 (974)
T ss_pred HHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHHHHHHHHHHhCCCcchhheeeeeec---cceeEE
Confidence 346799999999999975432 3468999887653 45567889999999999999999999999986 358999
Q ss_pred EeeccCChhh-hhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 198 FKYMEHDLAG-LAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 198 ~e~~~~~l~~-~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
||++.-|.+. ++..+...++......|+.||+.+|.|||+..+|||||-..||||.....|||+|||+++.++......
T Consensus 469 mEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYk 548 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYK 548 (974)
T ss_pred EecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhh
Confidence 9999866554 445556679999999999999999999999999999999999999999999999999999887654433
Q ss_pred CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCcc
Q 011041 277 MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI 355 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 355 (495)
.+...-..-|||||.+.- ..++.++|||-|||++||++. |..||.|-.+.+++..|.+.-.
T Consensus 549 aS~~kLPIKWmaPESINf-RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeR----------------- 610 (974)
T KOG4257|consen 549 ASRGKLPIKWMAPESINF-RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGER----------------- 610 (974)
T ss_pred ccccccceeecCccccch-hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCC-----------------
Confidence 332233567999998754 568999999999999999986 9999999877776665543211
Q ss_pred CCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHH
Q 011041 356 FKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAAL 399 (495)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL 399 (495)
....+.+|+.++.|+.+|+.+||.+||+..++.
T Consensus 611 -----------lP~P~nCPp~LYslmskcWayeP~kRPrftei~ 643 (974)
T KOG4257|consen 611 -----------LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIK 643 (974)
T ss_pred -----------CCCCCCCChHHHHHHHHHhccCcccCCcHHHHH
Confidence 112356889999999999999999999977654
No 388
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=5e-36 Score=310.84 Aligned_cols=252 Identities=22% Similarity=0.366 Sum_probs=217.4
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCC---eEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTG---QIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g---~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
.....|.+.||.|.||.|++|+.+..| ..||||.++... .......|..|+.||-+++||||++|.|++.. ..-
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy-tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk--s~P 704 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK--SKP 704 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc-cHHHHhhhhhhhhhcccCCCCcEEEEEEEEec--Cce
Confidence 355678889999999999999988776 469999987543 45566788899999999999999999999987 567
Q ss_pred eEEEEeeccCCh-hhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 194 LYLVFKYMEHDL-AGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 194 ~~lv~e~~~~~l-~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
+.||+|||+.+. ...+....++|+.-+...+++.|+.|+.||-++|+|||||-..||||+.+..+|++|||+++.+.+.
T Consensus 705 vMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccC
Confidence 999999999664 4455667788999999999999999999999999999999999999999999999999999988655
Q ss_pred CCCCCccccc--cCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 273 HKQPMTSRVV--TLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 273 ~~~~~~~~~g--t~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
....+++.-| ...|.|||.+.- ..++.++||||+||+|+|.++ |..||+.-+++++++.|.+...-|++
T Consensus 785 ~~~~ytt~GGKIPiRWTAPEAIa~-RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpP------- 856 (996)
T KOG0196|consen 785 PEAAYTTLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPP------- 856 (996)
T ss_pred CCccccccCCccceeecChhHhhh-cccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCC-------
Confidence 4344444444 567999999865 578999999999999999875 99999999999999999876654442
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.+.|..+..|+..|+++|-.+||+..||+.
T Consensus 857 ---------------------mDCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 857 ---------------------MDCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred ---------------------CCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 478899999999999999999999999876
No 389
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=311.09 Aligned_cols=261 Identities=27% Similarity=0.408 Sum_probs=221.7
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|+++..+|.|+||.||+++|+.+++..|+|+++... .+...-++.||-+++..+|||||.+++.|.. ...+++
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep--~dd~~~iqqei~~~~dc~h~nivay~gsylr--~dklwi 89 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP--GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR--RDKLWI 89 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccC--CccccccccceeeeecCCCcChHHHHhhhhh--hcCcEE
Confidence 378999999999999999999999999999999998764 3455677889999999999999999999876 456999
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
.||||+++.+..+..-.+.++|.++..+++..+.||+|||++|=+|||||-.|||+++.|.+||+|||.+..+... ...
T Consensus 90 cMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitat-i~K 168 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT-IAK 168 (829)
T ss_pred EEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhh-hhh
Confidence 9999999988888888889999999999999999999999999999999999999999999999999998766432 234
Q ss_pred CccccccCCCCCcccc--cCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 277 MTSRVVTLWYRPPELL--LGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 277 ~~~~~gt~~y~aPE~l--~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
..++.||++|||||+- .....|+..+|||++|++..|+---+||....-+...+..+.+....|+.
T Consensus 169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~------------ 236 (829)
T KOG0576|consen 169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPT------------ 236 (829)
T ss_pred hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCc------------
Confidence 5678999999999986 23457999999999999999999888887776666666555443332221
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
.+.-...++.+.+|++.+|.++|.+|||++.+|+|||.+.
T Consensus 237 ------------lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 237 ------------LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred ------------ccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 1111234567888999999999999999999999999875
No 390
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-35 Score=298.14 Aligned_cols=251 Identities=22% Similarity=0.299 Sum_probs=207.6
Q ss_pred CCCeeeeeeecccCceEEEEEEECCC-C--eEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLT-G--QIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~-g--~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
.++..++++||+|+||+|++|.+... | -.||||.++.+.... ....|.+|+.+|.+|+|+|+++|||++.+ .-
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~---qp 184 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD---QP 184 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc---ch
Confidence 45677889999999999999988643 3 468999998776554 67889999999999999999999999986 34
Q ss_pred eEEEEeeccCChhhhhh-C-CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 194 LYLVFKYMEHDLAGLAA-S-PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~-~-~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
+.||||++..+.+...+ . ....|.......|+.||+.|+.||.++++|||||-..||||-....|||+||||.+.+..
T Consensus 185 ~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 88999999976444333 3 455788999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCC-c-cccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhC
Q 011041 272 NHKQPM-T-SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 272 ~~~~~~-~-~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 348 (495)
+..... . ..-....|.|||.|.. ..++.++|||++||+||||++ |..||.|.+...++++|-+.-
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh-~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~e----------- 332 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRH-RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGE----------- 332 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhcc-ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccc-----------
Confidence 543221 1 1123567999998865 678999999999999999997 899999999999998884210
Q ss_pred CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 349 KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....+.+|.++++++..|+..+|++|||...|.+
T Consensus 333 -----------------rLpRPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 333 -----------------RLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred -----------------cCCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 12234568889999999999999999999988853
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=257.71 Aligned_cols=214 Identities=24% Similarity=0.413 Sum_probs=180.0
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~ 195 (495)
.++...+..||+|+||+|-+.++..+|...|+|.++.. .......++.+|+.+..+. ++|.+|+++|.+.. ...++
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~t-vn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r--egdvw 121 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRAT-VNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR--EGDVW 121 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhh-cChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc--cccEE
Confidence 46677788999999999999999999999999999754 3445566777888876665 89999999998776 56799
Q ss_pred EEEeeccCChhhhh---hCCCCCCCHHHHHHHHHHHHHHHHHhhhC-CceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 196 LVFKYMEHDLAGLA---ASPTIKFTQAQVKCYMHQLLSGLEHCHNQ-HVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 196 lv~e~~~~~l~~~~---~~~~~~l~e~~~~~i~~qil~~L~~LH~~-givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
|.||.|..++..++ ...+..++|..+-.++..++.||+|||++ .|||||+||+||||+.+|+||+||||++-.+.+
T Consensus 122 IcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d 201 (282)
T KOG0984|consen 122 ICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVD 201 (282)
T ss_pred EeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence 99999998766543 45677899999999999999999999965 899999999999999999999999999976643
Q ss_pred CCCCCCccccccCCCCCcccccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHH
Q 011041 272 NHKQPMTSRVVTLWYRPPELLLG---ATDYGVGVDLWSAGCILAELLAEKPIMPG-RTEVEQLHKIFK 335 (495)
Q Consensus 272 ~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~~~DvwSlGvil~elltG~~pf~~-~~~~~~~~~i~~ 335 (495)
.- ..+...|-..|||||.+.. ...|+.++||||||+++.||.+++.||.. .++.+++.++.+
T Consensus 202 Si--Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 202 SI--AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred hh--HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 21 2233467788999999843 24699999999999999999999999874 788899988875
No 392
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-35 Score=296.21 Aligned_cols=205 Identities=24% Similarity=0.394 Sum_probs=179.6
Q ss_pred CCCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChH------HHHHHHHHHHHHHhCC---CCCeeeeec
Q 011041 114 PRRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPE------SVRFMAREILILRRLD---HPNVVKLEG 184 (495)
Q Consensus 114 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~------~~~~~~~Ei~il~~l~---HpnIv~l~~ 184 (495)
..+..+|..++.||.|+||.|++|.++.....|+||.|.++..-.+ ....+-.||+||..|+ |+||+++++
T Consensus 557 ~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLd 636 (772)
T KOG1152|consen 557 YKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLD 636 (772)
T ss_pred ecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhh
Confidence 3456789999999999999999999999999999999987754211 1223557999999997 999999999
Q ss_pred eeeccCCceeEEEEeeccCC-hhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeec
Q 011041 185 LVTSRMSCSLYLVFKYMEHD-LAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADF 263 (495)
Q Consensus 185 ~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DF 263 (495)
+|++ +.++||+||-.+.+ .++.++.....++|.+++.|++|++.|+++||+.||||||||-||+.++.+|-+||+||
T Consensus 637 fFEd--dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 637 FFED--DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred eeec--CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeec
Confidence 9998 67899999987643 44556666778999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 011041 264 GLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPG 323 (495)
Q Consensus 264 G~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~ 323 (495)
|.+.... ..++..++||..|.|||++.|..+.+..-|||+||++||-++...-||+.
T Consensus 715 gsaa~~k---sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 715 GSAAYTK---SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred cchhhhc---CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 9997654 35678899999999999999988889999999999999999999888863
No 393
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-34 Score=290.87 Aligned_cols=245 Identities=22% Similarity=0.364 Sum_probs=201.0
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+...-.+||-|.||.||.+.++.-...||||.++-+. -.++.|..|+.+|+.++|||+|+|+|+|.. .--+|||+
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt---MeveEFLkEAAvMKeikHpNLVqLLGVCT~--EpPFYIiT 342 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTH--EPPFYIIT 342 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcc---hhHHHHHHHHHHHHhhcCccHHHHhhhhcc--CCCeEEEE
Confidence 3444578999999999999999999999999987554 345678899999999999999999999987 45699999
Q ss_pred eeccC-ChhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCC
Q 011041 199 KYMEH-DLAGLAASP-TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQP 276 (495)
Q Consensus 199 e~~~~-~l~~~~~~~-~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~ 276 (495)
|||.. +|+.++... ...++.-....++.||..|++||..+++|||||-..|.||.++..||++|||+++++....
T Consensus 343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT--- 419 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT--- 419 (1157)
T ss_pred ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc---
Confidence 99985 455555443 3346667778889999999999999999999999999999999999999999999886543
Q ss_pred Cccccc---cCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCC
Q 011041 277 MTSRVV---TLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH 352 (495)
Q Consensus 277 ~~~~~g---t~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 352 (495)
++.+.| ..-|.|||-|.- ..++.++|||+|||+|||+.| |..||+|.+-..++..+.+..
T Consensus 420 YTAHAGAKFPIKWTAPEsLAy-NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgy--------------- 483 (1157)
T KOG4278|consen 420 YTAHAGAKFPIKWTAPESLAY-NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGY--------------- 483 (1157)
T ss_pred eecccCccCcccccCcccccc-cccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccc---------------
Confidence 344444 567999998754 568999999999999999987 999999987665554443321
Q ss_pred CccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 353 ATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.-+....+|+.+++|++.|++|.|.+||+..|+-+
T Consensus 484 -------------RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 484 -------------RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred -------------cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence 11233568899999999999999999999888754
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-35 Score=306.04 Aligned_cols=246 Identities=26% Similarity=0.394 Sum_probs=188.3
Q ss_pred eeeecccCce-EEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeEEEEee
Q 011041 123 LDKIGQGTYS-NVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLYLVFKY 200 (495)
Q Consensus 123 ~~~LG~G~~g-~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~lv~e~ 200 (495)
-+.+|.|+.| .||+|. -.|+.||||.+- .+......+||..|+.- +|||||++++.-.+ ..++||..|.
T Consensus 514 ~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll-----~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d--~qF~YIalEL 584 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGV--YEGREVAVKRLL-----EEFFDFAQREIQLLQESDEHPNVIRYYCSEQD--RQFLYIALEL 584 (903)
T ss_pred HHHcccCCCCcEEEEEe--eCCceehHHHHh-----hHhHHHHHHHHHHHHhccCCCceEEEEeeccC--CceEEEEehH
Confidence 3668999887 689995 568899999864 45566788999999998 59999999665544 7899999999
Q ss_pred ccCChhhhhhCCCCC--C-CHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC---CC--cEEEeecccccccCCC
Q 011041 201 MEHDLAGLAASPTIK--F-TQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN---EG--ILTIADFGLASFFDPN 272 (495)
Q Consensus 201 ~~~~l~~~~~~~~~~--l-~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~---~~--~vkL~DFG~a~~~~~~ 272 (495)
|...|..++...... . ..-..+.++.|++.||.+||+.+||||||||.||||+. ++ .++|+|||+++....+
T Consensus 585 C~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~ 664 (903)
T KOG1027|consen 585 CACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG 664 (903)
T ss_pred hhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence 999988877763111 1 11445788999999999999999999999999999976 33 6899999999988654
Q ss_pred CC--CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHhcCCCChhhhhhCC
Q 011041 273 HK--QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAE-KPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSK 349 (495)
Q Consensus 273 ~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG-~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 349 (495)
.. ....+..||-+|+|||++.... -..++||+||||++|+.++| ..||...-. .-.+|+.. ...-.
T Consensus 665 ~sS~~r~s~~sGt~GW~APE~L~~~~-~~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~NIl~~--~~~L~------ 733 (903)
T KOG1027|consen 665 KSSFSRLSGGSGTSGWQAPEQLREDR-KTQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQANILTG--NYTLV------ 733 (903)
T ss_pred cchhhcccCCCCcccccCHHHHhccc-cCcccchhhcCceEEEEecCCccCCCchHH--hhhhhhcC--cccee------
Confidence 33 2244567899999999997643 46799999999999999986 899965322 22223221 11000
Q ss_pred CCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 350 LPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
..+...+ .++.|||.+||.+||..||+|.++|.||||-+
T Consensus 734 ----------------~L~~~~d--~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~ 772 (903)
T KOG1027|consen 734 ----------------HLEPLPD--CEAKDLISRMLNPDPQLRPSATDVLNHPLFWD 772 (903)
T ss_pred ----------------eeccCch--HHHHHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence 0000111 17899999999999999999999999999975
No 395
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.4e-33 Score=323.58 Aligned_cols=252 Identities=21% Similarity=0.292 Sum_probs=184.1
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
.|...+.||+|+||.||+|++..+|..||+|.+..... ....|+.++++++|||||++++++.+ ....|+||
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~~~~~~~~--~~~~~lv~ 762 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------IPSSEIADMGKLQHPNIVKLIGLCRS--EKGAYLIH 762 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------ccHHHHHHHhhCCCCCcceEEEEEEc--CCCCEEEE
Confidence 45666789999999999999999999999999864321 12246889999999999999999987 45789999
Q ss_pred eeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhh---hCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCC
Q 011041 199 KYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCH---NQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQ 275 (495)
Q Consensus 199 e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH---~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~ 275 (495)
||++++.+..+.. .+++..+..++.||+.||+||| +.+|+||||||+|||++.++..++. ||.......
T Consensus 763 Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~---- 834 (968)
T PLN00113 763 EYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT---- 834 (968)
T ss_pred eCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc----
Confidence 9999876666554 4789999999999999999999 6799999999999999999888775 665543321
Q ss_pred CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhcC-CCChhhhhhCCCCCC
Q 011041 276 PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEV-EQLHKIFKLCG-SPSEEYWKKSKLPHA 353 (495)
Q Consensus 276 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~g-~~~~~~~~~~~~~~~ 353 (495)
.....+|+.|+|||++.+ ..|+.++|||||||++|||++|+.||...... ..+....+... ......|....+
T Consensus 835 -~~~~~~t~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 909 (968)
T PLN00113 835 -DTKCFISSAYVAPETRET-KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSI--- 909 (968)
T ss_pred -CCCccccccccCcccccC-CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccc---
Confidence 123478899999998875 56899999999999999999999998542210 11111111100 000111100000
Q ss_pred ccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 354 TIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
.... ........++.+|+.+|++.||.+|||+.|+++.
T Consensus 910 ---~~~~-------~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 910 ---RGDV-------SVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred ---cCCC-------CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 0000 0000111346789999999999999999999873
No 396
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.8e-32 Score=268.40 Aligned_cols=197 Identities=25% Similarity=0.375 Sum_probs=162.2
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC--CCCCeeeeeceeeccC--Cc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL--DHPNVVKLEGLVTSRM--SC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l--~HpnIv~l~~~~~~~~--~~ 192 (495)
....++++.||+|.||.||+|+ .+++.||||++. ....+.+.+|-.|.... .|+||++++++-.... ..
T Consensus 209 l~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp-----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ 281 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFP-----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRM 281 (534)
T ss_pred CCchhhHHHhhcCccceeehhh--ccCceeEEEecC-----HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccc
Confidence 5667888999999999999995 567999999975 45567788888888864 7999999988764321 34
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhh---------CCceeccCCCCCeeeCCCCcEEEeec
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHN---------QHVLHRDIKGSNLLIDNEGILTIADF 263 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~---------~givHrDlKp~NILl~~~~~vkL~DF 263 (495)
.++||++|.+.+.+..++... .+++.....++..|++||+|||+ ..|+|||||..||||..|++..|+||
T Consensus 282 eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 282 EYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred ceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 689999999977666666544 58999999999999999999995 46999999999999999999999999
Q ss_pred ccccccCCCCC-CCCccccccCCCCCcccccCCCCCC-----chhhHHHHHHHHHHHHhCCCCC
Q 011041 264 GLASFFDPNHK-QPMTSRVVTLWYRPPELLLGATDYG-----VGVDLWSAGCILAELLAEKPIM 321 (495)
Q Consensus 264 G~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~-----~~~DvwSlGvil~elltG~~pf 321 (495)
|+|..+.+... ......+||..|||||+|.|...+. ...||||+|.+|+||++.-.-+
T Consensus 361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~ 424 (534)
T KOG3653|consen 361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDA 424 (534)
T ss_pred ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 99998865432 2334579999999999998765554 4589999999999999865433
No 397
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=1.8e-30 Score=241.38 Aligned_cols=213 Identities=36% Similarity=0.593 Sum_probs=178.7
Q ss_pred ecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCCh
Q 011041 126 IGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHDL 205 (495)
Q Consensus 126 LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~l 205 (495)
||+|.+|.||++++..+++.+++|++....... ....+.+|+.+++.+.|++|+++++++.. ....+++|||+.+..
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFED--ENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeec--CCeEEEEEecCCCCc
Confidence 689999999999998889999999987654322 35678899999999999999999999987 467999999999554
Q ss_pred hhhhhCCC-CCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC-CCcEEEeecccccccCCCCCCCCcccccc
Q 011041 206 AGLAASPT-IKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN-EGILTIADFGLASFFDPNHKQPMTSRVVT 283 (495)
Q Consensus 206 ~~~~~~~~-~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~-~~~vkL~DFG~a~~~~~~~~~~~~~~~gt 283 (495)
+..+.... ..+++..+..++.+++.+|.|||+.|++|+||+|.||+++. ++.++|+|||.+........ ......+.
T Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~ 156 (215)
T cd00180 78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVGT 156 (215)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccCC
Confidence 44444332 46899999999999999999999999999999999999999 89999999999987654321 12345678
Q ss_pred CCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccc
Q 011041 284 LWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYK 363 (495)
Q Consensus 284 ~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (495)
..|++||.+.....++.+.|+|+||+++++|
T Consensus 157 ~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------- 187 (215)
T cd00180 157 PAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------- 187 (215)
T ss_pred CCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------------
Confidence 8899999886533678999999999999999
Q ss_pred cccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCC
Q 011041 364 RCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSE 402 (495)
Q Consensus 364 ~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp 402 (495)
..+.++|..||..||.+||++.++++|+
T Consensus 188 -----------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -----------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -----------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1234479999999999999999999874
No 398
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.9e-31 Score=285.05 Aligned_cols=249 Identities=24% Similarity=0.333 Sum_probs=196.4
Q ss_pred eeeeeeecccCceEEEEEEEC----C---CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCC
Q 011041 120 FEKLDKIGQGTYSNVYKARDT----L---TGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~----~---~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~ 191 (495)
..+.+.||+|.||.|++|.-. . ....||+|.+...... .....+..|+.+|+.+ .|+||+.++|++.. .
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~--~ 374 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQ--D 374 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeecc--C
Confidence 366679999999999999642 1 2467999998765544 6778899999999999 59999999999988 6
Q ss_pred ceeEEEEeeccCChhh-hhhCCC---------------CCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC
Q 011041 192 CSLYLVFKYMEHDLAG-LAASPT---------------IKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE 255 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~-~~~~~~---------------~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~ 255 (495)
+.+++|+||+.++.+. .+.... ..++..+...++.||+.|++||++..+|||||-..||||..+
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~ 454 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKN 454 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCC
Confidence 7899999999965444 443333 248899999999999999999999999999999999999999
Q ss_pred CcEEEeecccccccCCCCCCCCccccc--cCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC-hHHHHH
Q 011041 256 GILTIADFGLASFFDPNHKQPMTSRVV--TLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRT-EVEQLH 331 (495)
Q Consensus 256 ~~vkL~DFG~a~~~~~~~~~~~~~~~g--t~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~-~~~~~~ 331 (495)
..+||+|||+|+..............+ ...|||||.+.. ..|+.++||||+||+|||+++ |..|+++-. ..+.+.
T Consensus 455 ~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~ 533 (609)
T KOG0200|consen 455 KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLE 533 (609)
T ss_pred CEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH
Confidence 999999999998543322211121222 334999999987 679999999999999999998 889998854 444444
Q ss_pred HHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 332 KIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 332 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.+.... ..+.....++++.++++.|++.||++||+..++..
T Consensus 534 ~l~~G~----------------------------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 534 FLKEGN----------------------------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHhcCC----------------------------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 332210 11222345788899999999999999999999875
No 399
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=2.1e-30 Score=245.12 Aligned_cols=212 Identities=35% Similarity=0.548 Sum_probs=175.8
Q ss_pred eeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEe
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFK 199 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e 199 (495)
|.+.+.||.|++|.||++.+..+++.+++|.+...... .....+.+|+..++.++|+||+++++++.. ....++++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFED--PEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeec--CCceEEEEe
Confidence 56788999999999999999988999999999865433 256788899999999999999999999876 467999999
Q ss_pred eccCChhhhhhCCCCC-CCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCc
Q 011041 200 YMEHDLAGLAASPTIK-FTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMT 278 (495)
Q Consensus 200 ~~~~~l~~~~~~~~~~-l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~ 278 (495)
|+.+..+..+...... +++..+..++.+++.+|.|||+++++|+||+|.||+++.++.++|+|||++............
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (225)
T smart00221 78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK 157 (225)
T ss_pred ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence 9998544444433334 899999999999999999999999999999999999999999999999999876543211234
Q ss_pred cccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CChH-HHHHHHH
Q 011041 279 SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPG-RTEV-EQLHKIF 334 (495)
Q Consensus 279 ~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~-~~~~-~~~~~i~ 334 (495)
...++..|++||.+.+...++.++|||+||+++|+|++|++||.. .+.. ...+.|.
T Consensus 158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (225)
T smart00221 158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWS 215 (225)
T ss_pred ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence 457788999999874445678899999999999999999999987 4444 4555554
No 400
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=6.3e-32 Score=302.95 Aligned_cols=203 Identities=16% Similarity=0.197 Sum_probs=145.9
Q ss_pred hCCC-CCeeeeeceeecc-----CCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCC
Q 011041 173 RLDH-PNVVKLEGLVTSR-----MSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIK 246 (495)
Q Consensus 173 ~l~H-pnIv~l~~~~~~~-----~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlK 246 (495)
.++| .||+++++++... ....++++|||++++|...+......+++.+++.|++||+.||.|||++||||||||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK 107 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR 107 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence 3445 5777777776211 124578889999998887776656679999999999999999999999999999999
Q ss_pred CCCeeeCCCC-------------------cEEEeecccccccCCCCC---------------CCCccccccCCCCCcccc
Q 011041 247 GSNLLIDNEG-------------------ILTIADFGLASFFDPNHK---------------QPMTSRVVTLWYRPPELL 292 (495)
Q Consensus 247 p~NILl~~~~-------------------~vkL~DFG~a~~~~~~~~---------------~~~~~~~gt~~y~aPE~l 292 (495)
|+||||+..| .+||+|||+++....... ......+||++|||||++
T Consensus 108 P~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 187 (793)
T PLN00181 108 PSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEED 187 (793)
T ss_pred chhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhh
Confidence 9999996544 455666666543211000 001124689999999998
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCC
Q 011041 293 LGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKD 372 (495)
Q Consensus 293 ~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (495)
.+ ..|+.++|||||||+||||++|.+||.... ..+..+.... .+ ... ..
T Consensus 188 ~~-~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~-~~-~~~--------------------------~~ 236 (793)
T PLN00181 188 NG-SSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV-LP-PQI--------------------------LL 236 (793)
T ss_pred cc-CCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh-cC-hhh--------------------------hh
Confidence 76 468999999999999999999998875422 1222221110 00 000 00
Q ss_pred CCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 373 FPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 373 ~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
-.+...+++..||..||.+|||+.|+|+||||..
T Consensus 237 ~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~ 270 (793)
T PLN00181 237 NWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE 270 (793)
T ss_pred cCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence 1234567899999999999999999999999976
No 401
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-30 Score=255.61 Aligned_cols=252 Identities=27% Similarity=0.326 Sum_probs=185.4
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHh--CCCCCeeeeeceeecc--CCc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRR--LDHPNVVKLEGLVTSR--MSC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~--l~HpnIv~l~~~~~~~--~~~ 192 (495)
..+..+.+.||+|-||.||+|.++ |+.||||++... +...+.||.+|.+. |+|+||+.+++.-... .-.
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr-----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR-----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred hheeEEEEEecCccccceeecccc--CCceEEEEeccc-----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 467889999999999999999765 889999998632 23456678888876 5999999998765322 124
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhh--------CCceeccCCCCCeeeCCCCcEEEeecc
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHN--------QHVLHRDIKGSNLLIDNEGILTIADFG 264 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~--------~givHrDlKp~NILl~~~~~vkL~DFG 264 (495)
.+|||++|.+.+.+.+++.. ..++......++..++.||.|||. ..|.|||||..||||..+|.+.|+|+|
T Consensus 283 QLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG 361 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 361 (513)
T ss_pred EEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece
Confidence 69999999998888887776 478999999999999999999994 359999999999999999999999999
Q ss_pred cccccCCCCC---CCCccccccCCCCCcccccCCCCC-----CchhhHHHHHHHHHHHHhC----------CCCCCCC--
Q 011041 265 LASFFDPNHK---QPMTSRVVTLWYRPPELLLGATDY-----GVGVDLWSAGCILAELLAE----------KPIMPGR-- 324 (495)
Q Consensus 265 ~a~~~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~-----~~~~DvwSlGvil~elltG----------~~pf~~~-- 324 (495)
||.......+ ......+||..|||||+|...... =..+||||||.|++|++.. ++||.+-
T Consensus 362 LAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp 441 (513)
T KOG2052|consen 362 LAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP 441 (513)
T ss_pred eeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC
Confidence 9987754422 345678999999999998543211 1358999999999999842 3566542
Q ss_pred --ChHHHHHHHHHhc-CCCChhhhhhCCCCCCccCCCCcccccccccccCCCC--CCcHHHHHHhccCCCCCccCHHHHH
Q 011041 325 --TEVEQLHKIFKLC-GSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFP--PSSLPLIETLLAIDPAERQTATAAL 399 (495)
Q Consensus 325 --~~~~~~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~Li~~~L~~dP~~R~ta~elL 399 (495)
...+.+.+++=.- ..|. +...+...+ ..+..|++.|+..||.-|.||-.+-
T Consensus 442 ~DPs~eeMrkVVCv~~~RP~------------------------ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 442 SDPSFEEMRKVVCVQKLRPN------------------------IPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK 497 (513)
T ss_pred CCCCHHHHhcceeecccCCC------------------------CCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence 1223333321100 0000 111111111 1345689999999999999987765
Q ss_pred h
Q 011041 400 R 400 (495)
Q Consensus 400 ~ 400 (495)
+
T Consensus 498 K 498 (513)
T KOG2052|consen 498 K 498 (513)
T ss_pred H
Confidence 3
No 402
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-30 Score=269.69 Aligned_cols=250 Identities=23% Similarity=0.285 Sum_probs=198.9
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCe----EEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCce
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQ----IVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~----~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~ 193 (495)
...+..++||+|+||+||+|.+-..|+ +||||++..... ......+..|+.+|..|+|||+++|++++... .
T Consensus 696 telkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~-~~~s~e~LdeAl~masldHpnl~RLLgvc~~s---~ 771 (1177)
T KOG1025|consen 696 TELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS-PKASIELLDEALRMASLDHPNLLRLLGVCMLS---T 771 (1177)
T ss_pred hhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC-chhhHHHHHHHHHHhcCCCchHHHHhhhcccc---h
Confidence 345556889999999999998865554 689998875543 33445677899999999999999999999763 3
Q ss_pred eEEEEeeccCC-hhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 194 LYLVFKYMEHD-LAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 194 ~~lv~e~~~~~-l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
+.||++||+++ |++.+...+..+-......|..||+.||.|||++++|||||-..||||....+|||+|||+++.....
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 88999999965 55566666778889999999999999999999999999999999999999999999999999988665
Q ss_pred CCCCCcc-ccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 273 HKQPMTS-RVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 273 ~~~~~~~-~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
..+.... ....+-|||-|.+.. ..|+.++||||+||++||++| |..|+.+....++-..+.+.. .
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~-~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge-R----------- 918 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRI-RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE-R----------- 918 (1177)
T ss_pred cccccccccccCcHHHHHHHhhc-cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc-c-----------
Confidence 5432222 122566889887764 679999999999999999997 889998877666543332110 0
Q ss_pred CCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 351 PHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
....+..+-++.-++-+||..|+..||+++++..
T Consensus 919 ----------------LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 919 ----------------LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred ----------------CCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 0112345667888999999999999999998865
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.2e-31 Score=242.89 Aligned_cols=257 Identities=21% Similarity=0.268 Sum_probs=192.6
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~ 195 (495)
.+.|.+.+.||+|.||.+.+|.++.++..+++|.+.... .....|.+|...--.| .|.||+.-|++.... .+.++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt-~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAFQT-SDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHhhc-CceEE
Confidence 578999999999999999999999999999999987553 4456788888776666 589999888764332 45788
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC--CCcEEEeecccccccCCCC
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN--EGILTIADFGLASFFDPNH 273 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~--~~~vkL~DFG~a~~~~~~~ 273 (495)
+++||++.+.+..-.... .+.|...+.++.|+++||+|+|++++||||||.+||||-. ..+|||||||+.+..+..
T Consensus 99 F~qE~aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t- 176 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT- 176 (378)
T ss_pred EeeccCccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCce-
Confidence 999999965554443332 4789999999999999999999999999999999999943 348999999998754321
Q ss_pred CCCCccccccCCCCCcccccCC----CCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHhcCCCChhhhhhC
Q 011041 274 KQPMTSRVVTLWYRPPELLLGA----TDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQ-LHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 274 ~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~-~~~i~~~~g~~~~~~~~~~ 348 (495)
..-.--+..|.+||++... -...+.+|||.||+|+|.+++|.+||......+. ..+.+ .|.+.
T Consensus 177 ---V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~---------~w~~r 244 (378)
T KOG1345|consen 177 ---VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWE---------QWLKR 244 (378)
T ss_pred ---ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHH---------HHhcc
Confidence 1112235669999987431 2245779999999999999999999974322111 00010 12221
Q ss_pred CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCc---cCHHHHHhCCCC
Q 011041 349 KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAER---QTATAALRSEFF 404 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R---~ta~elL~hp~f 404 (495)
+.+ .+...|..+++.+..++++-|..++.+| .++.......|.
T Consensus 245 k~~-------------~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 245 KNP-------------ALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred cCc-------------cCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence 111 1445667789999999999999999999 666666666664
No 404
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.8e-29 Score=270.62 Aligned_cols=266 Identities=24% Similarity=0.329 Sum_probs=200.4
Q ss_pred CCe-eeeeeecccCceEEEEEEECCCCeEEEeEEEecC----CCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc
Q 011041 118 DTF-EKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFD----NLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 118 ~~y-~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~----~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 192 (495)
+.| .....+|.|++|.|+.+........++.|..+.. .........+..|..+-..|.|+||+..+..+.+. .
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~--~ 394 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI--D 394 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc--c
Confidence 345 4557899999999999988877777777766522 11222222366788888889999998887777653 2
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
..+-+||||.+++...+ .....++..++..+++||+.||.|||++||.|||||++|+++..+|.+||+|||.+..+...
T Consensus 395 ~~~~~mE~~~~Dlf~~~-~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 395 GILQSMEYCPYDLFSLV-MSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred cchhhhhcccHHHHHHH-hcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 23444999999554444 44457899999999999999999999999999999999999999999999999999877544
Q ss_pred CC---CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHhcCCCChhhhhhC
Q 011041 273 HK---QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLH-KIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 273 ~~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~-~i~~~~g~~~~~~~~~~ 348 (495)
.. ......+|+..|+|||++.+...-...+||||.|++++.|++|+-||.-....+... .+.. ..|
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~-------~~~--- 543 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY-------SDQ--- 543 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc-------ccc---
Confidence 33 345667899999999999886555677999999999999999999997644332221 0000 000
Q ss_pred CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 349 KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
.....-....+..+|...+.+|.+||++||.+|.|+++||+.+||+..
T Consensus 544 -----------~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 544 -----------RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred -----------cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 000111223344577888999999999999999999999999999863
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95 E-value=3e-28 Score=223.05 Aligned_cols=165 Identities=20% Similarity=0.260 Sum_probs=125.9
Q ss_pred ChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCcccccc
Q 011041 204 DLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVVT 283 (495)
Q Consensus 204 ~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt 283 (495)
+|...+...+..+++.+++.++.||+.||.|||+++ ||+|||++.++.+|+ ||++...... ...||
T Consensus 2 sL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------~~~g~ 67 (176)
T smart00750 2 SLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE------QSRVD 67 (176)
T ss_pred cHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc------cCCCc
Confidence 444444444557999999999999999999999999 999999999999999 9999876432 22689
Q ss_pred CCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhcCCCChhhhhhCCCCCCccCCCCccc
Q 011041 284 LWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEV-EQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSY 362 (495)
Q Consensus 284 ~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 362 (495)
+.|+|||++.+ ..|+.++|||||||++|||++|.+||...... ..+..+......... .
T Consensus 68 ~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~---------------- 127 (176)
T smart00750 68 PYFMAPEVIQG-QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDP---R---------------- 127 (176)
T ss_pred ccccChHHhcC-CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCc---c----------------
Confidence 99999999876 56899999999999999999999999765543 233333221111000 0
Q ss_pred ccccccccCCCCC--CcHHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 363 KRCIAETFKDFPP--SSLPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 363 ~~~~~~~~~~~s~--~~~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
.......++. ++.+||.+||..||.+|||+.++++|+|+.
T Consensus 128 ---~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 128 ---DRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred ---ccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 0000112333 689999999999999999999999999875
No 406
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.95 E-value=3.6e-26 Score=225.60 Aligned_cols=263 Identities=32% Similarity=0.477 Sum_probs=205.9
Q ss_pred eeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCCh-HHHHHHHHHHHHHHhCCCC-CeeeeeceeeccCCceeEEE
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEP-ESVRFMAREILILRRLDHP-NVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~-~~~~~~~~Ei~il~~l~Hp-nIv~l~~~~~~~~~~~~~lv 197 (495)
|.+...||.|+||.||++.+. ..+++|.+....... .....+.+|+.++..+.|+ +|+++++++.. ....+++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~ 76 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD--EGSLYLV 76 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec--CCEEEEE
Confidence 778899999999999999877 788999987765433 2567888999999999988 79999999955 4458999
Q ss_pred EeeccCChhhhhhCCCC---CCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC-cEEEeecccccccCCCC
Q 011041 198 FKYMEHDLAGLAASPTI---KFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG-ILTIADFGLASFFDPNH 273 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~---~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~-~vkL~DFG~a~~~~~~~ 273 (495)
++|+.+..+........ .+++..+..++.|++.++.|+|+.|++||||||+||+++..+ .++++|||++..+....
T Consensus 77 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 77 MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred EecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999876665544443 789999999999999999999999999999999999999988 79999999998654333
Q ss_pred CC-----CCccccccCCCCCcccccCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHhcCCC-Ch
Q 011041 274 KQ-----PMTSRVVTLWYRPPELLLGA--TDYGVGVDLWSAGCILAELLAEKPIMPGRTE---VEQLHKIFKLCGSP-SE 342 (495)
Q Consensus 274 ~~-----~~~~~~gt~~y~aPE~l~~~--~~~~~~~DvwSlGvil~elltG~~pf~~~~~---~~~~~~i~~~~g~~-~~ 342 (495)
.. .....+||..|++||++.+. ..+....|+||+|++++++++|..||..... ......+......+ ..
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA 236 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccc
Confidence 21 24667899999999998764 4788999999999999999999999887764 33333333332222 00
Q ss_pred hhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCC
Q 011041 343 EYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTK 407 (495)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~ 407 (495)
.... .. .. ......+.+++..++..+|..|.+..+...++|....
T Consensus 237 ~~~~-------------~~----~~---~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 281 (384)
T COG0515 237 SPLS-------------PS----NP---ELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL 281 (384)
T ss_pred cccC-------------cc----cc---chhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence 0000 00 00 1122457889999999999999999999988776643
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.95 E-value=4.1e-27 Score=237.67 Aligned_cols=164 Identities=22% Similarity=0.244 Sum_probs=130.2
Q ss_pred CCCeeeeeeecccCceEEEEEEECC-CCeEEEeEEEecCCC---ChHHHHHHHHHHHHHHhCCCCCeee-eeceeeccCC
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTL-TGQIVALKKVRFDNL---EPESVRFMAREILILRRLDHPNVVK-LEGLVTSRMS 191 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~-~g~~vAiK~i~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~-l~~~~~~~~~ 191 (495)
.+.|.+.+.||+|+||+||+|+++. +++.||||++..... .......+.+|+.+|+.|+|+||+. ++++
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~------ 90 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT------ 90 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc------
Confidence 5789999999999999999999876 788889998753311 2334567899999999999999985 4432
Q ss_pred ceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccC-CCCCeeeCCCCcEEEeecccccccC
Q 011041 192 CSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDI-KGSNLLIDNEGILTIADFGLASFFD 270 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDl-Kp~NILl~~~~~vkL~DFG~a~~~~ 270 (495)
...||||||++|+.+.... . .. ...++.|++.+|.|||++||+|||| ||+|||++.++.+||+|||+++.+.
T Consensus 91 ~~~~LVmE~~~G~~L~~~~-~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~ 163 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLAR-P---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFR 163 (365)
T ss_pred CCcEEEEEccCCCCHHHhC-c---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecc
Confidence 2479999999987665321 1 11 1467899999999999999999999 9999999999999999999998765
Q ss_pred CCCC-------CCCccccccCCCCCccccc
Q 011041 271 PNHK-------QPMTSRVVTLWYRPPELLL 293 (495)
Q Consensus 271 ~~~~-------~~~~~~~gt~~y~aPE~l~ 293 (495)
.... ....+.++++.|+|||.+.
T Consensus 164 ~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 164 RRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred cCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 4321 1124567889999999874
No 408
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95 E-value=8.5e-29 Score=254.31 Aligned_cols=243 Identities=26% Similarity=0.394 Sum_probs=204.8
Q ss_pred eecccCceEEEEEEE---CCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCCceeEEEEee
Q 011041 125 KIGQGTYSNVYKARD---TLTGQIVALKKVRFDNLEPESVRFMAREILILRRLD-HPNVVKLEGLVTSRMSCSLYLVFKY 200 (495)
Q Consensus 125 ~LG~G~~g~Vy~a~~---~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~~~lv~e~ 200 (495)
.+|+|+||.|++++. ...|..||+|+..+.............|..++..++ ||.+|+++..++. +..+|+++++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt--~~kl~l~ld~ 78 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQT--DGKLYLILDF 78 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecc--ccchhHhhhh
Confidence 379999999998753 356788999998876553333235567888999987 9999999999887 5679999999
Q ss_pred ccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccc
Q 011041 201 MEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSR 280 (495)
Q Consensus 201 ~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~ 280 (495)
..++.+.........+.+...+.+...++-+++++|+.||+|||+|++||+++.+|++++.|||+++..-.....
T Consensus 79 ~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~----- 153 (612)
T KOG0603|consen 79 LRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA----- 153 (612)
T ss_pred cccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc-----
Confidence 999888777777778999999999999999999999999999999999999999999999999999876543322
Q ss_pred cccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCc
Q 011041 281 VVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQ 360 (495)
Q Consensus 281 ~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 360 (495)
|||..|||||++.+ ....+|+||||+++|+|++|..||.+ +++..|.+..-..+.
T Consensus 154 cgt~eymApEI~~g---h~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~------------------ 208 (612)
T KOG0603|consen 154 CGTYEYRAPEIING---HLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR------------------ 208 (612)
T ss_pred ccchhhhhhHhhhc---cCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch------------------
Confidence 99999999998863 57889999999999999999999988 788888774433332
Q ss_pred ccccccccccCCCCCCcHHHHHHhccCCCCCccC-----HHHHHhCCCCCCCCCC
Q 011041 361 SYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT-----ATAALRSEFFTTKPYA 410 (495)
Q Consensus 361 ~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t-----a~elL~hp~f~~~~~~ 410 (495)
.++..+.+++..|+..+|..|.- +.++++|+||+...|.
T Consensus 209 -----------~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~ 252 (612)
T KOG0603|consen 209 -----------ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWN 252 (612)
T ss_pred -----------hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHh
Confidence 34567888999999999999965 5899999999987775
No 409
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.94 E-value=2.6e-26 Score=222.68 Aligned_cols=252 Identities=20% Similarity=0.243 Sum_probs=197.8
Q ss_pred CCeeeeeeecccCceEEEEEEECCCC-----eEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTG-----QIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g-----~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 192 (495)
.++++...+-+|.||.||.|.+++.. +.|-+|.++.. .++-++..+..|...|..+.|||+..+.++.... ..
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~-AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~-~~ 361 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH-ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIED-YA 361 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc-ccHHHHHHHHHHHHHHhcCcCCCccceeEEEeec-cC
Confidence 56888899999999999999776443 34666766432 3455677888999999999999999998887653 45
Q ss_pred eeEEEEeeccCChhhhhhC--------CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecc
Q 011041 193 SLYLVFKYMEHDLAGLAAS--------PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFG 264 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~--------~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG 264 (495)
..+..+.+++.+.+..... ....++..+...++.||..|++|||++||||.||-..|.+||+..+|||+|=.
T Consensus 362 ~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsa 441 (563)
T KOG1024|consen 362 TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSA 441 (563)
T ss_pred cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccch
Confidence 6788888988665554432 12247778888999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCc-cccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCh
Q 011041 265 LASFFDPNHKQPMT-SRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGSPSE 342 (495)
Q Consensus 265 ~a~~~~~~~~~~~~-~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~~~ 342 (495)
+++..-+.+..... +..-...||+||.+.. ..|+.++|+|||||+||||+| |+.|+..-++.+...-+.+..
T Consensus 442 LSRDLFP~DYhcLGDnEnRPvkWMslEal~n-~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGy----- 515 (563)
T KOG1024|consen 442 LSRDLFPGDYHCLGDNENRPVKWMSLEALQN-SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGY----- 515 (563)
T ss_pred hccccCcccccccCCCCCCcccccCHHHHhh-hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccc-----
Confidence 99865443322221 1122556999998875 679999999999999999998 899998888887766554321
Q ss_pred hhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 343 EYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
.....-++|+++..++..|+..+|++||+.+|+..
T Consensus 516 -----------------------RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 516 -----------------------RLAQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred -----------------------eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 11112357899999999999999999999999875
No 410
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.94 E-value=6.3e-27 Score=251.13 Aligned_cols=226 Identities=30% Similarity=0.371 Sum_probs=173.3
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
.++|..+++|-.|+||.||.++|+.+.+.+|+ +|.+.++- +++ ||.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~li------lRn---ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNLI------LRN---ILTFAGNPFVV---------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhh-cccccchh------hhc---cccccCCccee----------------
Confidence 57899999999999999999999999999999 45544321 111 22223333333
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC--
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK-- 274 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~-- 274 (495)
||...++.. .+.++... +.+++|||+.||+|||+||+|+||+.-|++|++|||+.+...-...
T Consensus 136 ------gDc~tllk~-~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 ------GDCATLLKN-IGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred ------chhhhhccc-CCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 333323222 22344332 7799999999999999999999999999999999999865421100
Q ss_pred ------------CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCh
Q 011041 275 ------------QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSE 342 (495)
Q Consensus 275 ------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~ 342 (495)
..-...+|||.|+|||++.. ..|+..+|||+||+|+||.+.|..||.|+++++.+...+......++
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE 279 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE 279 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhh-hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccc
Confidence 01124589999999999986 57999999999999999999999999999999999888765433332
Q ss_pred hhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCc---cCHHHHHhCCCCCCCCCC
Q 011041 343 EYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAER---QTATAALRSEFFTTKPYA 410 (495)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R---~ta~elL~hp~f~~~~~~ 410 (495)
. ...+++++.+||..+|+.+|..| ..+.++.+|+||+.-.|.
T Consensus 280 ~--------------------------dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 280 E--------------------------DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred c--------------------------CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 2 24578999999999999999999 458889999999987775
No 411
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=2.9e-25 Score=223.57 Aligned_cols=254 Identities=22% Similarity=0.217 Sum_probs=188.4
Q ss_pred CeeeeeeecccCceEEEEEEECCCC-eEEEeEEEecCCCChHHHHHHHHHHHHHHhCCC----CCeeeeeceeeccCCce
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTG-QIVALKKVRFDNLEPESVRFMAREILILRRLDH----PNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g-~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H----pnIv~l~~~~~~~~~~~ 193 (495)
+|.+.+.||+|+||.||.|.+..++ ..+|+|+.......... .+..|+.+|..+.. .++..+++... ....+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~--~l~~E~~vl~~l~~~~~~~~~~~~~~~G~-~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS--VLKIEIQVLKKLEKKNGPSHFPKLLDHGR-STEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc--cchhHHHHHHHHhhhcCCCCCCEEEEecc-CCCce
Confidence 8999999999999999999988775 68899987754322111 56678899988863 58888888874 12567
Q ss_pred eEEEEeeccCChhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC-----CcEEEeeccccc
Q 011041 194 LYLVFKYMEHDLAGLAASP-TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE-----GILTIADFGLAS 267 (495)
Q Consensus 194 ~~lv~e~~~~~l~~~~~~~-~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~-----~~vkL~DFG~a~ 267 (495)
-||||+.++.+|..+.... ...|+...+..++.|++.+|++||+.|++||||||+|+++... ..+.|.|||+++
T Consensus 96 ~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 96 NFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred eEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 8999999999998877543 4789999999999999999999999999999999999999765 369999999998
Q ss_pred --ccCCCCC----CC---CccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcC
Q 011041 268 --FFDPNHK----QP---MTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCG 338 (495)
Q Consensus 268 --~~~~~~~----~~---~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g 338 (495)
.+..... .. .....||..|.++.+..+ ...+...|+||++.++.+|+.|..||.+........++.....
T Consensus 176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~-~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG-IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred cccccCCCCcccccCCCCccCCCCccccccHHHhCC-CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 3321211 11 123459999999999887 5679999999999999999999999977654333333222111
Q ss_pred CCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHh
Q 011041 339 SPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALR 400 (495)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~ 400 (495)
..... ......+.++..+...+-..+...+|....+..
T Consensus 255 ~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 255 KLLTD------------------------RFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred hhccc------------------------cccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence 00000 011122344555666666677788887766654
No 412
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=5.2e-25 Score=201.62 Aligned_cols=205 Identities=23% Similarity=0.258 Sum_probs=169.6
Q ss_pred CCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCCcee
Q 011041 116 RADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLD-HPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 116 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~~ 194 (495)
..+.|.++++||.|+||.+|+|....+|+.||||+-...... ..+..|.++.+.|. ...|+.+..+..+ ..+-
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h----pqL~yEskvY~iL~~g~GiP~i~~y~~e--~~yn 86 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH----PQLLYESKVYRILQGGVGIPHIRHYGTE--KDYN 86 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC----cchhHHHHHHHHhccCCCCchhhhhccc--cccc
Confidence 468999999999999999999999999999999987644322 34567899999986 4678777777766 4677
Q ss_pred EEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC---CCcEEEeecccccccCC
Q 011041 195 YLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN---EGILTIADFGLASFFDP 271 (495)
Q Consensus 195 ~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~---~~~vkL~DFG~a~~~~~ 271 (495)
.+||++++-+|..+..-....|+...+.-++-|++.-++|+|.+++|||||||+|+|..- ...+.|+|||+|+.+.+
T Consensus 87 vlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 87 VLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred eeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 999999998888887777778999999999999999999999999999999999999854 35699999999987743
Q ss_pred CCCC------CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Q 011041 272 NHKQ------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEV 327 (495)
Q Consensus 272 ~~~~------~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~ 327 (495)
.... .-....||..|.+--...+. .-+...|+-|+|.+|.++.-|..||.|....
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~-eqSRRDDmeSvgYvLmYfnrG~LPWQglka~ 227 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGI-EQSRRDDMESVGYVLMYFNRGSLPWQGLKAA 227 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhh-hhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence 3221 12355789999987777663 4578899999999999999999999986543
No 413
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=1.3e-24 Score=207.32 Aligned_cols=209 Identities=22% Similarity=0.275 Sum_probs=173.5
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~l 196 (495)
-.|.++++||+|+||++|.|++.-++++||||.-.... ....+..|.+..+.| ..++|...|-|... +.+-.|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS----~APQLrdEYr~YKlL~g~~GIP~vYYFGqe--G~~NiL 101 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQE--GKYNIL 101 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC----CcchHHHHHHHHHHHcCCCCCCceeeeccc--cchhhh
Confidence 46999999999999999999999999999999754332 234566788888887 57899988766544 667789
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC-----cEEEeecccccccCC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG-----ILTIADFGLASFFDP 271 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~-----~vkL~DFG~a~~~~~ 271 (495)
|||+++-+|.+++.-.+..|+...+..++.|++.-++|+|++.+|+|||||+|+||...+ .|-|+|||+|+.+.+
T Consensus 102 VidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 102 VIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred hhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 999999998888888888999999999999999999999999999999999999997543 589999999998744
Q ss_pred CCCC------CCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---ChHHHHHHH
Q 011041 272 NHKQ------PMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGR---TEVEQLHKI 333 (495)
Q Consensus 272 ~~~~------~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~---~~~~~~~~i 333 (495)
.... ...+..||..||+=...+|. .-+...|+=|||-++++.|-|..||.|. +..+..++|
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGr-EQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKI 251 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGR-EQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKI 251 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccc-hhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHh
Confidence 3221 12355799999999888884 4588999999999999999999999984 444555554
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.91 E-value=1.8e-24 Score=200.96 Aligned_cols=141 Identities=21% Similarity=0.248 Sum_probs=110.1
Q ss_pred eeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHH------------------------HHHHHHHHHHHHhCCCCC
Q 011041 123 LDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPES------------------------VRFMAREILILRRLDHPN 178 (495)
Q Consensus 123 ~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~------------------------~~~~~~Ei~il~~l~Hpn 178 (495)
...||+|+||.||+|.+. +|+.||||+++........ .....+|+.+|..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 357999999999999987 8999999999765321111 123345999999998887
Q ss_pred eeeeeceeeccCCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHh-hhCCceeccCCCCCeeeCCCCc
Q 011041 179 VVKLEGLVTSRMSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHC-HNQHVLHRDIKGSNLLIDNEGI 257 (495)
Q Consensus 179 Iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~L-H~~givHrDlKp~NILl~~~~~ 257 (495)
|.....+... ..+|||||++++.+.........+++..+..++.||+.+|.|| |+.||+||||||+|||++ ++.
T Consensus 81 v~~p~~~~~~----~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 81 IPCPEPILLK----SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCCcEEEec----CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCc
Confidence 7544332222 2389999999865433322345789999999999999999999 799999999999999998 578
Q ss_pred EEEeeccccccc
Q 011041 258 LTIADFGLASFF 269 (495)
Q Consensus 258 vkL~DFG~a~~~ 269 (495)
++|+|||+|...
T Consensus 156 v~LiDFG~a~~~ 167 (190)
T cd05147 156 LYIIDVSQSVEH 167 (190)
T ss_pred EEEEEccccccC
Confidence 999999999754
No 415
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.91 E-value=2e-24 Score=209.58 Aligned_cols=238 Identities=22% Similarity=0.306 Sum_probs=152.3
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCC----------CCCeeeeecee
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLD----------HPNVVKLEGLV 186 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~----------HpnIv~l~~~~ 186 (495)
..+...+.||.|+++.||.++|..||+.+|+|+...... .....+.+.+|......+. |-.++..++..
T Consensus 12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~ 91 (288)
T PF14531_consen 12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL 91 (288)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence 356778899999999999999999999999999876654 3345667777765554432 21222222221
Q ss_pred e---------ccC---Cc---eeEEEEeeccCChhhhhhC----CCCCCCH--HHHHHHHHHHHHHHHHhhhCCceeccC
Q 011041 187 T---------SRM---SC---SLYLVFKYMEHDLAGLAAS----PTIKFTQ--AQVKCYMHQLLSGLEHCHNQHVLHRDI 245 (495)
Q Consensus 187 ~---------~~~---~~---~~~lv~e~~~~~l~~~~~~----~~~~l~e--~~~~~i~~qil~~L~~LH~~givHrDl 245 (495)
. ... .. ..+++|+-+.+++...... ....... .....+..|++..+++||..||||+||
T Consensus 92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp EETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 1 110 01 3477888888887655321 1111122 222345589999999999999999999
Q ss_pred CCCCeeeCCCCcEEEeecccccccCCCCCCCCccccccCCCCCcccccCC-------CCCCchhhHHHHHHHHHHHHhCC
Q 011041 246 KGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVVTLWYRPPELLLGA-------TDYGVGVDLWSAGCILAELLAEK 318 (495)
Q Consensus 246 Kp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-------~~~~~~~DvwSlGvil~elltG~ 318 (495)
||+|+|++.+|.++|+||+.....+.. ......+..|.+||+.... ..++.+.|.|+||+++|.|+||.
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~----~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~ 247 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTR----YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGR 247 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEE----EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCce----eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHcc
Confidence 999999999999999999988765432 1113446779999976331 24788999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCc
Q 011041 319 PIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAER 392 (495)
Q Consensus 319 ~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R 392 (495)
.||.......... | . +. ...++|+.+++||..||+.||.+|
T Consensus 248 lPf~~~~~~~~~~-------------~---------------~----f~-~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 248 LPFGLSSPEADPE-------------W---------------D----FS-RCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp -STCCCGGGSTSG-------------G---------------G----GT-TSS---HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCCcccccc-------------c---------------c----ch-hcCCcCHHHHHHHHHHccCCcccC
Confidence 9997654321100 0 1 11 123688889999999999999988
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90 E-value=1.1e-23 Score=198.62 Aligned_cols=174 Identities=11% Similarity=0.116 Sum_probs=132.6
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCCh-HHHHH------HHHHHHHHHhCCCCCeeeeeceeecc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEP-ESVRF------MAREILILRRLDHPNVVKLEGLVTSR 189 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~-~~~~~------~~~Ei~il~~l~HpnIv~l~~~~~~~ 189 (495)
.++|++++.||.|+||.||++.+ ++..+|||+++...... ..... +.+|+..+.++.|++|+.+.+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 47899999999999999999754 46689999997543322 22222 68999999999999999998886643
Q ss_pred C------CceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeec
Q 011041 190 M------SCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADF 263 (495)
Q Consensus 190 ~------~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DF 263 (495)
. ....+|+|||++|..+..+. .+++ ....+|+.+|..||+.||+||||||+||+++.+| ++|+||
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDf 178 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDL 178 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEEC
Confidence 2 24589999999987655442 2333 2466999999999999999999999999999999 999999
Q ss_pred ccccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHH
Q 011041 264 GLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELL 315 (495)
Q Consensus 264 G~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~ell 315 (495)
|.......... -+.+.-...|+.++|+|+|||++..+.
T Consensus 179 g~~~~~~e~~a--------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 179 SGKRCTAQRKA--------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCcccccchhh--------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 98865532111 111222245778999999999987765
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.90 E-value=2.3e-23 Score=193.70 Aligned_cols=142 Identities=21% Similarity=0.270 Sum_probs=112.7
Q ss_pred eeeecccCceEEEEEEECCCCeEEEeEEEecCCCCh------------------------HHHHHHHHHHHHHHhCCCCC
Q 011041 123 LDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEP------------------------ESVRFMAREILILRRLDHPN 178 (495)
Q Consensus 123 ~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~------------------------~~~~~~~~Ei~il~~l~Hpn 178 (495)
.+.||+|+||+||+|++. +|+.||||+++...... .....+.+|+..+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999987 89999999998653210 01223468999999999998
Q ss_pred eeeeeceeeccCCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCCc
Q 011041 179 VVKLEGLVTSRMSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEGI 257 (495)
Q Consensus 179 Iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~~ 257 (495)
|.....+... ..||||||++++...........+++..+..++.|++.+|.+||+ .||+||||||+|||++ ++.
T Consensus 81 i~~p~~~~~~----~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~ 155 (190)
T cd05145 81 VPVPEPILLK----KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCCceEEEec----CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCC
Confidence 8655444432 248999999986322221223468889999999999999999999 9999999999999999 899
Q ss_pred EEEeecccccccC
Q 011041 258 LTIADFGLASFFD 270 (495)
Q Consensus 258 vkL~DFG~a~~~~ 270 (495)
++|+|||++....
T Consensus 156 ~~liDFG~a~~~~ 168 (190)
T cd05145 156 PYIIDVSQAVELD 168 (190)
T ss_pred EEEEEcccceecC
Confidence 9999999997654
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=8.6e-23 Score=188.83 Aligned_cols=190 Identities=17% Similarity=0.149 Sum_probs=140.7
Q ss_pred eeeeecccCceEEEEEEECCCCeEEEeEEEecCCCC--hHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCCceeEEEE
Q 011041 122 KLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLE--PESVRFMAREILILRRLD-HPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 122 ~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~--~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
+...|++|+||+||.+.. .+..++.+.+...... .-....+.+|+++|++|. |++|++++++ ...|++|
T Consensus 6 ~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~------~~~~lvm 77 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW------DGRHLDR 77 (218)
T ss_pred cceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE------cCEEEEE
Confidence 457899999999998753 6777777766544331 112235789999999995 5889999885 1369999
Q ss_pred eeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccC-CCCCeeeCCCCcEEEeecccccccCCCCCC--
Q 011041 199 KYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDI-KGSNLLIDNEGILTIADFGLASFFDPNHKQ-- 275 (495)
Q Consensus 199 e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDl-Kp~NILl~~~~~vkL~DFG~a~~~~~~~~~-- 275 (495)
||+.|..+..... .. ...++.|++.+|.+||++||+|||| ||+|||++.+|.++|+|||++.........
T Consensus 78 eyI~G~~L~~~~~------~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 78 SYLAGAAMYQRPP------RG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred eeecCccHHhhhh------hh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence 9999876643221 11 2457899999999999999999999 799999999999999999999865543210
Q ss_pred --CC--------ccccccCCCCCcccccCCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCh
Q 011041 276 --PM--------TSRVVTLWYRPPELLLGATDYG-VGVDLWSAGCILAELLAEKPIMPGRTE 326 (495)
Q Consensus 276 --~~--------~~~~gt~~y~aPE~l~~~~~~~-~~~DvwSlGvil~elltG~~pf~~~~~ 326 (495)
.. .-...++.|+.|+.-.-....+ ...++++.|+-+|.++|+..++.+.++
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 00 0112478888888653322233 567999999999999999998877654
No 419
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=2e-23 Score=203.33 Aligned_cols=260 Identities=26% Similarity=0.380 Sum_probs=178.5
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCC-----------------------------------eEEEeEEEecCCC---Ch
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTG-----------------------------------QIVALKKVRFDNL---EP 158 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g-----------------------------------~~vAiK~i~~~~~---~~ 158 (495)
.++|+++..||+|....||.|+....| -+.|||++-.-.. ..
T Consensus 156 iddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s~~~ 235 (598)
T KOG4158|consen 156 IDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDSGDA 235 (598)
T ss_pred hhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCCchH
Confidence 578999999999999999999654311 1346665532111 12
Q ss_pred HHHHHHHHHHHH------H--------Hh--------CCCCCeeeeeceeecc-------------------------CC
Q 011041 159 ESVRFMAREILI------L--------RR--------LDHPNVVKLEGLVTSR-------------------------MS 191 (495)
Q Consensus 159 ~~~~~~~~Ei~i------l--------~~--------l~HpnIv~l~~~~~~~-------------------------~~ 191 (495)
...+.+.+|..- + +. -+|||||++.++|.+. ..
T Consensus 236 ~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~ 315 (598)
T KOG4158|consen 236 HILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEP 315 (598)
T ss_pred HHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCC
Confidence 223333333311 1 11 1699999998877542 23
Q ss_pred ceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeee--CCCC--cEEEeeccccc
Q 011041 192 CSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLI--DNEG--ILTIADFGLAS 267 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl--~~~~--~vkL~DFG~a~ 267 (495)
..+|+||.-..+.|..++..+ ..+....+-++.|+++|+.|||.+||.|||||.+|||| |+|+ .+.|+|||.+-
T Consensus 316 ~tlylvMkrY~~tLr~yl~~~--~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 316 KTLYLVMKRYRQTLREYLWTR--HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred ceEEEehhcchhhHHHHHhcC--CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence 578999999888888877665 46778888999999999999999999999999999999 3444 58999999874
Q ss_pred ccCCCC-----CCCCccccccCCCCCcccccCCC------CCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh
Q 011041 268 FFDPNH-----KQPMTSRVVTLWYRPPELLLGAT------DYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKL 336 (495)
Q Consensus 268 ~~~~~~-----~~~~~~~~gt~~y~aPE~l~~~~------~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~ 336 (495)
..+... ....-..-|....||||+..... .| .++|.|+.|-+.||+++..-||++..+.-.-..
T Consensus 394 Ad~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny-~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r---- 468 (598)
T KOG4158|consen 394 ADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNY-EKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR---- 468 (598)
T ss_pred eccccccccccccccccCCCcceecchhhhhcCCCCceeecc-chhhhhhhhhhHHHHhccCCcccccchheechh----
Confidence 332211 01112335677799999874321 12 368999999999999999999988443211100
Q ss_pred cCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccC---HHHHHhCCCCCC
Q 011041 337 CGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQT---ATAALRSEFFTT 406 (495)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~t---a~elL~hp~f~~ 406 (495)
.+...++| .....+|+.+.+|+..+|+.||.+|++ |..+|+-..|..
T Consensus 469 -------~Yqe~qLP----------------alp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~LsLw~~ 518 (598)
T KOG4158|consen 469 -------TYQESQLP----------------ALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNLSLWRM 518 (598)
T ss_pred -------hhhhhhCC----------------CCcccCChHHHHHHHHHhcCCccccCCccHHHhHHHHHHhcC
Confidence 11122222 223467889999999999999999998 456666444443
No 420
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.89 E-value=2.5e-23 Score=223.70 Aligned_cols=249 Identities=25% Similarity=0.355 Sum_probs=179.9
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCC--CChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEE
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDN--LEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~--~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~l 196 (495)
+|...+.||++-|=.|.+|++.+ |. |++|++-+.. ..-........|++ ...++|||++.+.-+.+. +...||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t--~kAAyl 98 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVT--DKAAYL 98 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHh--hHHHHH
Confidence 68888999999999999998664 44 8999986543 23334444445666 666799999998777655 567899
Q ss_pred EEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeeccccccc-CCC-CC
Q 011041 197 VFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFF-DPN-HK 274 (495)
Q Consensus 197 v~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~-~~~-~~ 274 (495)
|-+|+.+.|.+.+.. +.-+.+-+-+.|+.||+.||.-||..||+|||||.|||||+.-+-+.|+||..-+.. -+. +.
T Consensus 99 vRqyvkhnLyDRlST-RPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 99 VRQYVKHNLYDRLST-RPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred HHHHHhhhhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 999999988765543 345788888999999999999999999999999999999999999999999876432 111 11
Q ss_pred CCCccccc----cCCCCCcccccCCC---------C-CCchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCC
Q 011041 275 QPMTSRVV----TLWYRPPELLLGAT---------D-YGVGVDLWSAGCILAELLA-EKPIMPGRTEVEQLHKIFKLCGS 339 (495)
Q Consensus 275 ~~~~~~~g----t~~y~aPE~l~~~~---------~-~~~~~DvwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~ 339 (495)
..++-+.. -.+|+|||.+.... . .+++-||||+||+++||++ |.|||.- .++-.....- .
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~aYr~~~-~ 252 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLLAYRSGN-A 252 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHHhHhccC-c
Confidence 11222222 34699999985421 1 5678999999999999988 7999942 2222211100 1
Q ss_pred CChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 340 PSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
...+. +.+... +..+++||..|++.||.+|.+|++.|+-
T Consensus 253 ~~~e~---------------------~Le~Ie--d~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 253 DDPEQ---------------------LLEKIE--DVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred cCHHH---------------------HHHhCc--CccHHHHHHHHHccCchhccCHHHHHHh
Confidence 10000 111111 2478899999999999999999999983
No 421
>smart00090 RIO RIO-like kinase.
Probab=99.85 E-value=4.7e-21 Score=183.99 Aligned_cols=145 Identities=20% Similarity=0.163 Sum_probs=114.3
Q ss_pred CCeeeeeeecccCceEEEEEE-ECCCCeEEEeEEEecCCCCh----------------------HHHHHHHHHHHHHHhC
Q 011041 118 DTFEKLDKIGQGTYSNVYKAR-DTLTGQIVALKKVRFDNLEP----------------------ESVRFMAREILILRRL 174 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~-~~~~g~~vAiK~i~~~~~~~----------------------~~~~~~~~Ei~il~~l 174 (495)
..|.+.+.||+|+||.||+|+ +..+|+.||||+++...... .....+.+|+.++.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 468899999999999999998 67789999999997643210 0123467899999999
Q ss_pred CCCC--eeeeeceeeccCCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCC-ceeccCCCCCee
Q 011041 175 DHPN--VVKLEGLVTSRMSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQH-VLHRDIKGSNLL 251 (495)
Q Consensus 175 ~Hpn--Iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~g-ivHrDlKp~NIL 251 (495)
.+.+ ++++++ . ...|+||||++++.+.........+.+..+..++.||+.+|.+||+.| |+||||||+|||
T Consensus 108 ~~~~i~~p~~~~---~---~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIl 181 (237)
T smart00090 108 YEAGVPVPKPIA---W---RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNIL 181 (237)
T ss_pred HhcCCCCCeeeE---e---cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEE
Confidence 7633 333333 2 124899999999765444333445677778899999999999999999 999999999999
Q ss_pred eCCCCcEEEeeccccccc
Q 011041 252 IDNEGILTIADFGLASFF 269 (495)
Q Consensus 252 l~~~~~vkL~DFG~a~~~ 269 (495)
++ ++.++|+|||++...
T Consensus 182 i~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 182 VH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EE-CCCEEEEEChhhhcc
Confidence 99 889999999998754
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.85 E-value=9.5e-21 Score=177.90 Aligned_cols=136 Identities=18% Similarity=0.211 Sum_probs=104.1
Q ss_pred eeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-----CCCCeeeeeceeeccCC-ceeE-
Q 011041 123 LDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-----DHPNVVKLEGLVTSRMS-CSLY- 195 (495)
Q Consensus 123 ~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~l~~~~~~~~~-~~~~- 195 (495)
.+.||+|+||.||. +..++.. +||++..... ...+.+.+|+.+++.| +||||+++++++++..+ +.++
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 46899999999995 6777665 6999876432 2346789999999999 67999999999987532 3434
Q ss_pred EEEeecc--CChhhhhhCCCCCCCHHHHHHHHHHHHHHH-HHhhhCCceeccCCCCCeeeCC----CCcEEEeecccc
Q 011041 196 LVFKYME--HDLAGLAASPTIKFTQAQVKCYMHQLLSGL-EHCHNQHVLHRDIKGSNLLIDN----EGILTIADFGLA 266 (495)
Q Consensus 196 lv~e~~~--~~l~~~~~~~~~~l~e~~~~~i~~qil~~L-~~LH~~givHrDlKp~NILl~~----~~~vkL~DFG~a 266 (495)
+||||.+ ++.+..+.... .+++. ..++.|++.++ +|||+++||||||||+|||++. ++.++|+||+.+
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 7899954 44444444433 46666 35688888888 9999999999999999999974 347999995544
No 423
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=3.7e-22 Score=214.31 Aligned_cols=263 Identities=25% Similarity=0.368 Sum_probs=207.2
Q ss_pred CCeeeeeeecccCceEEEEEEEC-CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCCceeE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDT-LTGQIVALKKVRFDNLEPESVRFMAREILILRRLD-HPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~-~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~~~ 195 (495)
..|.+.+.||+|+|+.|-.+... .+...+|.|.+...............|..+-..+. |.|++.+++...+ ....+
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~--~~~~~ 97 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS--PRSYL 97 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC--Ccccc
Confidence 45777888999999999998764 34456777777655444555566677888888887 9999999998877 56789
Q ss_pred EEEeeccCChhhhhh-CCCC-CCCHHHHHHHHHHHHHHHHHhh-hCCceeccCCCCCeeeCCCC-cEEEeecccccccCC
Q 011041 196 LVFKYMEHDLAGLAA-SPTI-KFTQAQVKCYMHQLLSGLEHCH-NQHVLHRDIKGSNLLIDNEG-ILTIADFGLASFFDP 271 (495)
Q Consensus 196 lv~e~~~~~l~~~~~-~~~~-~l~e~~~~~i~~qil~~L~~LH-~~givHrDlKp~NILl~~~~-~vkL~DFG~a~~~~~ 271 (495)
++++|..++.+.... .... ..+...+..++.|+..+|.|+| ..++.|+||||+|.+++..+ .+|+.|||+|..+..
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999998887666655 5444 6788889999999999999999 99999999999999999999 999999999987755
Q ss_pred --CCCCCCccccc-cCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhC
Q 011041 272 --NHKQPMTSRVV-TLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKS 348 (495)
Q Consensus 272 --~~~~~~~~~~g-t~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 348 (495)
+........+| ++.|+|||.+.+....+...|+||+|+++.-+++|..|+.......... ..|...
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~-----------~~~~~~ 246 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY-----------SSWKSN 246 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc-----------eeeccc
Confidence 23333455688 9999999999876667889999999999999999999986544332100 011110
Q ss_pred CCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 349 KLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
+ .+.-...+..++....+++.++|..+|..|.+.+++-.++|+..
T Consensus 247 ~-------------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 247 K-------------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred c-------------cccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 0 00012234567888999999999999999999999999999988
No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=2.6e-20 Score=204.29 Aligned_cols=193 Identities=22% Similarity=0.255 Sum_probs=151.7
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCC-hHHHHHHHHHHHHHHhCC---CCCeeeeeceeeccCCc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLE-PESVRFMAREILILRRLD---HPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~~~~ 192 (495)
...|.|-+.||+|+||.||+|.+.. |+.||||+-...... --.. .+++.+|+ -+.|..+..++.. .+
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~------~q~~~RLk~~~~~~~~~~~~a~~~--~~ 767 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYIC------LQVMERLKPQMLPSIMHISSAHVF--QN 767 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeeh------HHHHHhhchhhhcchHHHHHHHcc--CC
Confidence 5789999999999999999999877 999999987655432 1111 23344444 2345555555444 34
Q ss_pred eeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC-------CCcEEEeeccc
Q 011041 193 SLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN-------EGILTIADFGL 265 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~-------~~~vkL~DFG~ 265 (495)
.-++|+||.+.|.+..+....+.+++..+..+..||+..|++||.++|||+||||+|+||.. .--++|+|||.
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred cceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 57899999998766666667778999999999999999999999999999999999999942 23599999999
Q ss_pred ccccCC-CCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 011041 266 ASFFDP-NHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKP 319 (495)
Q Consensus 266 a~~~~~-~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~ 319 (495)
+.-+.. .....+...++|-.+-.+|+..| ..+++.+|.|.|.-++|.||.|+.
T Consensus 848 siDm~lfp~~~~F~~~~~td~f~C~EM~~g-rpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 848 SIDMKLFPDGTKFKAVWHTDLFDCIEMREG-RPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ceeeeEcCCCcEEeeeeccccchhHHHhcC-CCCchhhhhHHHHHHHHHHHHHHH
Confidence 864421 12235667788999999998877 689999999999999999999964
No 425
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.82 E-value=5.5e-21 Score=193.52 Aligned_cols=177 Identities=28% Similarity=0.438 Sum_probs=133.0
Q ss_pred eeEEEEeeccCChhhhhhCCC---CCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeeccccccc
Q 011041 193 SLYLVFKYMEHDLAGLAASPT---IKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFF 269 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~~---~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~ 269 (495)
++||.|++|..+.+.+++... ..-+......++.||..+++| +|.+|+|+||.||++..+..+||+|||+....
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 589999999988887777532 245677889999999999999 99999999999999999999999999999876
Q ss_pred CCCC-----CCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH-hcCCCChh
Q 011041 270 DPNH-----KQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFK-LCGSPSEE 343 (495)
Q Consensus 270 ~~~~-----~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~-~~g~~~~~ 343 (495)
.... ....+..+||.+||+||.+.+ ..|+.++||||||+|||||+.- |.. ..+....... --|..++.
T Consensus 407 ~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g-~~y~~kvdIyaLGlil~EL~~~---f~T--~~er~~t~~d~r~g~ip~~ 480 (516)
T KOG1033|consen 407 DKDETVAPAAASHTQQVGTLLYMSPEQIRG-QQYSEKVDIYALGLILAELLIQ---FST--QFERIATLTDIRDGIIPPE 480 (516)
T ss_pred ccCCcccchhhhhhhcccccccCCHHHHhh-hhhhhhcchhhHHHHHHHHHHH---hcc--HHHHHHhhhhhhcCCCChH
Confidence 5433 223456789999999999987 6799999999999999999971 211 1111111100 01122222
Q ss_pred hhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCC
Q 011041 344 YWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFF 404 (495)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f 404 (495)
+|. + -+.-.+|+..||...|.+||++.+.-.|.|.
T Consensus 481 ~~~-------------------------d-~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 481 FLQ-------------------------D-YPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred Hhh-------------------------c-CcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 221 1 2455689999999999999988877777664
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=3.7e-19 Score=167.91 Aligned_cols=137 Identities=18% Similarity=0.212 Sum_probs=109.6
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCCChH------HHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPE------SVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~------~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
+.||+|++|.||+|.+ .|..|++|+......... ....+.+|+.++..+.|++|+....++.+ ....+++
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--~~~~~lv 77 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD--PENFIIV 77 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe--CCCCEEE
Confidence 5799999999999976 677899998654332111 22457789999999999998777666554 3457899
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeeccccccc
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFF 269 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~ 269 (495)
|||++|..+........ . ....++.+|+.+|.+||+.|++|||++|.|||++ ++.++|+|||++...
T Consensus 78 ~e~~~G~~L~~~~~~~~---~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~ 144 (211)
T PRK14879 78 MEYIEGEPLKDLINSNG---M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFS 144 (211)
T ss_pred EEEeCCcCHHHHHHhcc---H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccCC
Confidence 99999866655543321 2 7789999999999999999999999999999999 789999999998753
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.80 E-value=3.7e-19 Score=166.47 Aligned_cols=139 Identities=22% Similarity=0.215 Sum_probs=108.1
Q ss_pred CeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCCh--------------------HHHHHHHHHHHHHHhCCCCC
Q 011041 119 TFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEP--------------------ESVRFMAREILILRRLDHPN 178 (495)
Q Consensus 119 ~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~--------------------~~~~~~~~Ei~il~~l~Hpn 178 (495)
.|.+.+.||+|+||.||++.+. +|+.||||+++...... .......+|+.++..+.|.+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 4778899999999999999865 79999999987543110 01123667899999998874
Q ss_pred --eeeeeceeeccCCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC
Q 011041 179 --VVKLEGLVTSRMSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG 256 (495)
Q Consensus 179 --Iv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~ 256 (495)
++.+++ .+..++||||+++..+..... ......++.+|+.++.++|+.||+||||||+||+|+.++
T Consensus 95 i~v~~~~~------~~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 95 FPVPKPID------WNRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDE 162 (198)
T ss_pred CCCCceee------cCCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCC
Confidence 333332 134589999999876544322 134567899999999999999999999999999999999
Q ss_pred cEEEeecccccccC
Q 011041 257 ILTIADFGLASFFD 270 (495)
Q Consensus 257 ~vkL~DFG~a~~~~ 270 (495)
.++|+|||++....
T Consensus 163 ~~~liDfg~~~~~~ 176 (198)
T cd05144 163 KIYIIDWPQMVSTD 176 (198)
T ss_pred cEEEEECCccccCC
Confidence 99999999996554
No 428
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.80 E-value=7.2e-20 Score=170.54 Aligned_cols=253 Identities=17% Similarity=0.212 Sum_probs=194.0
Q ss_pred cccCCCCCCCCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceee
Q 011041 108 AISGWTPRRADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVT 187 (495)
Q Consensus 108 ~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~ 187 (495)
+++.++-....+..++.+|.+...|..|++++. |..++.|++..........+.|..|.-.|+-+.||||+.+++.+.
T Consensus 180 tlsr~~gid~~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacn 257 (448)
T KOG0195|consen 180 TLSRYTGIDVSSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACN 257 (448)
T ss_pred ccccccCcchhhhhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhcc
Confidence 445555555677778889999999999999765 556778888777666667778889999999999999999999998
Q ss_pred ccCCceeEEEEeeccCChhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHhhhCC--ceeccCCCCCeeeCCCCcEEE--e
Q 011041 188 SRMSCSLYLVFKYMEHDLAGLAASP--TIKFTQAQVKCYMHQLLSGLEHCHNQH--VLHRDIKGSNLLIDNEGILTI--A 261 (495)
Q Consensus 188 ~~~~~~~~lv~e~~~~~l~~~~~~~--~~~l~e~~~~~i~~qil~~L~~LH~~g--ivHrDlKp~NILl~~~~~vkL--~ 261 (495)
. ...+.++..||+.+.+..++.. ....+..++..++.+|+.|+.|||+.. |.---|....++||++.+.+| +
T Consensus 258 s--ppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarisma 335 (448)
T KOG0195|consen 258 S--PPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMA 335 (448)
T ss_pred C--CCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecc
Confidence 7 4568999999997766655433 334678899999999999999999865 444568888999999876554 4
Q ss_pred ecccccccCCCCCCCCccccccCCCCCcccccCCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC
Q 011041 262 DFGLASFFDPNHKQPMTSRVVTLWYRPPELLLGATD--YGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGS 339 (495)
Q Consensus 262 DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~--~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~ 339 (495)
|--++... ....-.|.||+||.+..... .-.++|+|||.++|+||.|...||..-.+.+.-.+|.-.-
T Consensus 336 d~kfsfqe--------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeg-- 405 (448)
T KOG0195|consen 336 DTKFSFQE--------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEG-- 405 (448)
T ss_pred cceeeeec--------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcc--
Confidence 44333211 22344788999999876432 2357999999999999999999999988887766653211
Q ss_pred CChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHH
Q 011041 340 PSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAAL 399 (495)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL 399 (495)
....+.+.++..+..|+.-|+..||.+||....++
T Consensus 406 -------------------------lrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 406 -------------------------LRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred -------------------------ccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 11233456777888999999999999999987664
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.76 E-value=3.9e-18 Score=159.45 Aligned_cols=133 Identities=17% Similarity=0.200 Sum_probs=102.3
Q ss_pred eecccCceEEEEEEECCCCeEEEeEEEecCCCCh------HHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEE
Q 011041 125 KIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEP------ESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 125 ~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~------~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~ 198 (495)
.||+|+||.||++. .+|..|++|+........ .....+.+|+.++..+.|+++.....++.. ....++||
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--~~~~~lv~ 76 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD--PDNKTIVM 76 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE--CCCCEEEE
Confidence 38999999999997 467889999865432211 123567789999999988876544434433 34578999
Q ss_pred eeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeeccccccc
Q 011041 199 KYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFF 269 (495)
Q Consensus 199 e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~ 269 (495)
||++|..+........ ..++.||+.+|.+||+.||+|||++|+|||++ ++.++|+|||++...
T Consensus 77 e~~~g~~l~~~~~~~~-------~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 77 EYIEGKPLKDVIEEGN-------DELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred EEECCccHHHHHhhcH-------HHHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999876654443221 17899999999999999999999999999999 899999999998653
No 430
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.75 E-value=5.9e-18 Score=156.56 Aligned_cols=138 Identities=25% Similarity=0.270 Sum_probs=98.8
Q ss_pred eeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHH----------------------HHHHHHHHHhCCCCC--
Q 011041 123 LDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRF----------------------MAREILILRRLDHPN-- 178 (495)
Q Consensus 123 ~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~----------------------~~~Ei~il~~l~Hpn-- 178 (495)
++.||+|+||.||+|.+. +|+.||||++............ ...|...+..+.+.+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999976 7999999998764322111111 135666666664433
Q ss_pred eeeeeceeeccCCceeEEEEeeccCChhh-hhhCCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCC
Q 011041 179 VVKLEGLVTSRMSCSLYLVFKYMEHDLAG-LAASPTIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEG 256 (495)
Q Consensus 179 Iv~l~~~~~~~~~~~~~lv~e~~~~~l~~-~~~~~~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~ 256 (495)
+++++++ ...++||||++++... ...... ... .++..++.+++.++.++|. .||+|+||||+||+++ ++
T Consensus 81 ~~~~~~~------~~~~lv~e~~~g~~~~~~~l~~~-~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 81 VPKPIDL------NRHVLVMEFIGGDGIPAPRLKDV-RLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CCceEec------CCCEEEEEEeCCCCccChhhhhh-hhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC
Confidence 3444332 1358999999984221 111110 111 6778999999999999999 9999999999999999 89
Q ss_pred cEEEeecccccccC
Q 011041 257 ILTIADFGLASFFD 270 (495)
Q Consensus 257 ~vkL~DFG~a~~~~ 270 (495)
.++|+|||.+....
T Consensus 152 ~~~liDfg~a~~~~ 165 (187)
T cd05119 152 KVYIIDVPQAVEID 165 (187)
T ss_pred cEEEEECccccccc
Confidence 99999999996543
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.74 E-value=1.6e-17 Score=178.45 Aligned_cols=139 Identities=14% Similarity=0.118 Sum_probs=107.3
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-C-----hHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCC
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-E-----PESVRFMAREILILRRLDHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~-----~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 191 (495)
..|...+.||+|+||.||++.+.. ..+++|+...... . ......+.+|+.+++.++|++|+..+.+..+ .
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--~ 408 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD--P 408 (535)
T ss_pred cccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe--C
Confidence 445667899999999999997643 3455554322211 1 1123567899999999999999887666655 3
Q ss_pred ceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeeccccccc
Q 011041 192 CSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFF 269 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~ 269 (495)
...++||||+++..+..... ....++.||+.+|.|||+.||+||||||+|||+ .++.++|+|||++...
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 45789999999876654432 457789999999999999999999999999999 6789999999999753
No 432
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.71 E-value=2.1e-17 Score=170.49 Aligned_cols=206 Identities=26% Similarity=0.397 Sum_probs=152.9
Q ss_pred HHhCCCCCeeeeeceeeccCCceeEEEEeeccCChhhhhh-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCc-eeccCCCC
Q 011041 171 LRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHDLAGLAA-SPTIKFTQAQVKCYMHQLLSGLEHCHNQHV-LHRDIKGS 248 (495)
Q Consensus 171 l~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~-~~~~~l~e~~~~~i~~qil~~L~~LH~~gi-vHrDlKp~ 248 (495)
|+.+.|.|+.+++|.+.+ ....++|.+||..+.+.+.. .....++.-....++++|+.||.|||+..| .|+.|+..
T Consensus 1 l~~l~h~n~~~f~g~~~~--~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVD--GPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEec--CCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccc
Confidence 457899999999999988 46789999999976665554 446678888999999999999999998766 99999999
Q ss_pred CeeeCCCCcEEEeecccccccCCC-CCCCCccccccCCCCCcccccCCCC------CCchhhHHHHHHHHHHHHhCCCCC
Q 011041 249 NLLIDNEGILTIADFGLASFFDPN-HKQPMTSRVVTLWYRPPELLLGATD------YGVGVDLWSAGCILAELLAEKPIM 321 (495)
Q Consensus 249 NILl~~~~~vkL~DFG~a~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~------~~~~~DvwSlGvil~elltG~~pf 321 (495)
|.++|....+||+|||+....... .........-..-|.|||++.+... .+.+.||||+|+++||+++...||
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 999999999999999998776421 1111112223556999999866311 356799999999999999999999
Q ss_pred CCCCh----HHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHH
Q 011041 322 PGRTE----VEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATA 397 (495)
Q Consensus 322 ~~~~~----~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~e 397 (495)
..... .++...+.+ .+..+ +.| .+.. ...+++++..++..|+..+|.+||++++
T Consensus 159 ~~~~~~~~~~eii~~~~~-~~~~~--------------~rP------~i~~-~~e~~~~l~~l~~~cw~e~P~~rPs~~~ 216 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILRVKK-GGSNP--------------FRP------SIEL-LNELPPELLLLVARCWEEIPEKRPSIEQ 216 (484)
T ss_pred ccccccCChHHHHHHHHh-cCCCC--------------cCc------chhh-hhhcchHHHHHHHHhcccChhhCccHHH
Confidence 86332 233333332 11100 000 0111 1145668999999999999999999999
Q ss_pred HHh
Q 011041 398 ALR 400 (495)
Q Consensus 398 lL~ 400 (495)
+-.
T Consensus 217 i~~ 219 (484)
T KOG1023|consen 217 IRS 219 (484)
T ss_pred HHh
Confidence 854
No 433
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=3.1e-17 Score=169.32 Aligned_cols=256 Identities=21% Similarity=0.253 Sum_probs=197.7
Q ss_pred CCCeeeeeeecc--cCceEEEEEEE--CCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeeceeeccCC
Q 011041 117 ADTFEKLDKIGQ--GTYSNVYKARD--TLTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGLVTSRMS 191 (495)
Q Consensus 117 ~~~y~~~~~LG~--G~~g~Vy~a~~--~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~ 191 (495)
...|.+...+|. |.+|.||.+.. ..++..+|+|.-+.....+.....=.+|+.-.+.+ .|+|.++.+..++. .
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~--~ 190 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG--S 190 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc--C
Confidence 356777888999 99999999988 88999999998443322122222223566666666 49999998888887 6
Q ss_pred ceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHH----HHHHhhhCCceeccCCCCCeeeCCC-CcEEEeecccc
Q 011041 192 CSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLS----GLEHCHNQHVLHRDIKGSNLLIDNE-GILTIADFGLA 266 (495)
Q Consensus 192 ~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~----~L~~LH~~givHrDlKp~NILl~~~-~~vkL~DFG~a 266 (495)
+.+|+-+|+++..+..........+++..++.++.+... ||.++|+.+++|-|+||+||++..+ ...+++|||+.
T Consensus 191 ~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 191 GILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred CcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCccee
Confidence 789999999999999888888878999999999999999 9999999999999999999999999 78999999999
Q ss_pred cccCCCCCCCC----ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHhcCCC
Q 011041 267 SFFDPNHKQPM----TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGR--TEVEQLHKIFKLCGSP 340 (495)
Q Consensus 267 ~~~~~~~~~~~----~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~--~~~~~~~~i~~~~g~~ 340 (495)
..+........ ....|..-|++||++.+ -++...||++||.++.+..+|..++... +...++..++ .
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~--l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-----i 343 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNG--LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-----I 343 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhcc--ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc-----C
Confidence 88865542111 11246777999998865 5789999999999999999887655433 2222222211 0
Q ss_pred ChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCC
Q 011041 341 SEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTT 406 (495)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~ 406 (495)
-.+.+...+.++...+..|+..||..|+++..++.|+++..
T Consensus 344 -------------------------p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 344 -------------------------PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred -------------------------chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 11223334455556899999999999999999999999874
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.70 E-value=1.7e-16 Score=152.74 Aligned_cols=138 Identities=15% Similarity=0.175 Sum_probs=101.8
Q ss_pred eeec-ccCceEEEEEEECCCCeEEEeEEEecCCC-----------ChHHHHHHHHHHHHHHhCCCCCe--eeeeceeecc
Q 011041 124 DKIG-QGTYSNVYKARDTLTGQIVALKKVRFDNL-----------EPESVRFMAREILILRRLDHPNV--VKLEGLVTSR 189 (495)
Q Consensus 124 ~~LG-~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-----------~~~~~~~~~~Ei~il~~l~HpnI--v~l~~~~~~~ 189 (495)
..|| .|+.|+||.+.. .+..++||.+..... .......+.+|+.++..|.|++| +..+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 788888888864 377899998854321 11233567889999999998875 6676664432
Q ss_pred CCc--eeEEEEeeccC-ChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccc
Q 011041 190 MSC--SLYLVFKYMEH-DLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLA 266 (495)
Q Consensus 190 ~~~--~~~lv~e~~~~-~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a 266 (495)
... ..++||||+++ ..+..+... ..+++.. +.||+.+|.+||++||+||||||+|||++.++.++|+|||.+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 221 23599999996 344433332 2455543 678999999999999999999999999999999999999988
Q ss_pred cc
Q 011041 267 SF 268 (495)
Q Consensus 267 ~~ 268 (495)
..
T Consensus 190 ~~ 191 (239)
T PRK01723 190 EL 191 (239)
T ss_pred cc
Confidence 64
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.67 E-value=4e-16 Score=137.66 Aligned_cols=133 Identities=23% Similarity=0.224 Sum_probs=109.0
Q ss_pred eeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCC--CCeeeeeceeeccCCceeEEEEe
Q 011041 122 KLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDH--PNVVKLEGLVTSRMSCSLYLVFK 199 (495)
Q Consensus 122 ~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H--pnIv~l~~~~~~~~~~~~~lv~e 199 (495)
+++.||+|.++.||++.+.. ..+++|.+..... ...+.+|+.+++.+.| .++++++.++.. ....|++||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~--~~~~~~v~e 73 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGES--DGWSYLLME 73 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCccEEEEE
Confidence 45789999999999998643 6899998865432 3567889999999976 588898887765 357899999
Q ss_pred eccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhC---CceeccCCCCCeeeCCCCcEEEeeccccccc
Q 011041 200 YMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQ---HVLHRDIKGSNLLIDNEGILTIADFGLASFF 269 (495)
Q Consensus 200 ~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~---givHrDlKp~NILl~~~~~vkL~DFG~a~~~ 269 (495)
|+.+..+... +......++.+++.+|.+||.. +++|+||+|+|||++..+.++|+|||++...
T Consensus 74 ~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 74 WIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 9987654332 5566678899999999999984 7999999999999999999999999988643
No 436
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.67 E-value=1.7e-17 Score=179.15 Aligned_cols=266 Identities=23% Similarity=0.259 Sum_probs=201.0
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-ChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
.+.+.+.+-+-+|+++.++.+.-..+|...++|+..+... .....+...++-.++-...+|.+++..--+.. ....+
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~--rsP~~ 880 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC--RSPLP 880 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC--CCCcc
Confidence 4678888899999999999998888888888887654332 22223334444444444456777665443333 45689
Q ss_pred EEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC---
Q 011041 196 LVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN--- 272 (495)
Q Consensus 196 lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~--- 272 (495)
++++|.+++.+.-.+..-...++.-++.++..+...++|||...++|+|++|.|+|+..+|+.+++|||......-.
T Consensus 881 L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred hhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence 99999987655555554456788888999999999999999999999999999999999999999999844322100
Q ss_pred --C-----------------C--------CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 011041 273 --H-----------------K--------QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRT 325 (495)
Q Consensus 273 --~-----------------~--------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~ 325 (495)
. . ..-...+||+.|.+||.+.+. ..+..+|+|++|++++|.++|.+||...+
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~-~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGR-RHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccc-cCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 0 0 011235789999999999884 56889999999999999999999999999
Q ss_pred hHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHH---HHHhCC
Q 011041 326 EVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTAT---AALRSE 402 (495)
Q Consensus 326 ~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~---elL~hp 402 (495)
...++..|.+..- .|+ .-....++.+++++..+|..+|.+|..+. ++-.|+
T Consensus 1040 pq~~f~ni~~~~~-----~~p---------------------~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~ 1093 (1205)
T KOG0606|consen 1040 PQQIFENILNRDI-----PWP---------------------EGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHP 1093 (1205)
T ss_pred hhhhhhccccCCC-----CCC---------------------CCccccChhhhhhhhhhhccCchhccCcccccccccCC
Confidence 9988877754221 121 12234678899999999999999999887 899999
Q ss_pred CCCCCCCCC
Q 011041 403 FFTTKPYAC 411 (495)
Q Consensus 403 ~f~~~~~~~ 411 (495)
||+...|..
T Consensus 1094 ~~~~~~~~~ 1102 (1205)
T KOG0606|consen 1094 FFQDVDWEN 1102 (1205)
T ss_pred ccCCCCccc
Confidence 999887754
No 437
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54 E-value=3.4e-15 Score=154.33 Aligned_cols=260 Identities=20% Similarity=0.198 Sum_probs=189.2
Q ss_pred cccCCCCCCCCCeeeeeeecccCceEEEEEEEC-CCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhC-CCCCeeeeece
Q 011041 108 AISGWTPRRADTFEKLDKIGQGTYSNVYKARDT-LTGQIVALKKVRFDNLEPESVRFMAREILILRRL-DHPNVVKLEGL 185 (495)
Q Consensus 108 ~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~-~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~ 185 (495)
....|+.....+|..+..||.|.|+.||.+..+ .++..|++|.....-.......+-..|+.+...+ -|.+++.++..
T Consensus 255 ~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~ 334 (524)
T KOG0601|consen 255 TTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSS 334 (524)
T ss_pred cccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCC
Confidence 334455666789999999999999999998755 6788999998765544333333444677777766 48899998777
Q ss_pred eeccCCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC-CcEEEeecc
Q 011041 186 VTSRMSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE-GILTIADFG 264 (495)
Q Consensus 186 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~-~~vkL~DFG 264 (495)
|.. ....|+-.|||++....+...-...+.+...+.+..|++.++.++|++.++|+|+||+||++..+ +..++.|||
T Consensus 335 W~~--~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~ 412 (524)
T KOG0601|consen 335 WSQ--LRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFG 412 (524)
T ss_pred ccc--cccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccc
Confidence 765 34567999999887666655444467888999999999999999999999999999999999886 788999999
Q ss_pred cccccCCCCCCCCccccccCCCC-CcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChh
Q 011041 265 LASFFDPNHKQPMTSRVVTLWYR-PPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEE 343 (495)
Q Consensus 265 ~a~~~~~~~~~~~~~~~gt~~y~-aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~ 343 (495)
..+.+.-. ......+-+++ ..|++.....+..+.|++|||..+.+.++|.+.-+..+.. ..|...
T Consensus 413 ~~t~~~~~----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~---~~i~~~------- 478 (524)
T KOG0601|consen 413 CWTRLAFS----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS---LTIRSG------- 478 (524)
T ss_pred ccccccee----cccccccccccccchhhccccccccccccccccccccccccCcccCcccccc---eeeecc-------
Confidence 98643211 11222344455 3666766677889999999999999999997654322111 111000
Q ss_pred hhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 344 YWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
...........+..+.+.++..|+..|+.+.++..|.=|-
T Consensus 479 ----------------------~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 479 ----------------------DTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred ----------------------cccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 0011122335677789999999999999999998876553
No 438
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.51 E-value=1.3e-13 Score=127.60 Aligned_cols=139 Identities=18% Similarity=0.187 Sum_probs=100.9
Q ss_pred eeecccCceEEEEEEECC------CCeEEEeEEEecCCC--------------------ChHHHHHHH----HHHHHHHh
Q 011041 124 DKIGQGTYSNVYKARDTL------TGQIVALKKVRFDNL--------------------EPESVRFMA----REILILRR 173 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~------~g~~vAiK~i~~~~~--------------------~~~~~~~~~----~Ei~il~~ 173 (495)
..||.|--+.||.|.... .+..+|||+.+.... .......+. +|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997553 357899998753210 011122333 89999999
Q ss_pred CCC--CCeeeeeceeeccCCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHh-hhCCceeccCCCCCe
Q 011041 174 LDH--PNVVKLEGLVTSRMSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHC-HNQHVLHRDIKGSNL 250 (495)
Q Consensus 174 l~H--pnIv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~L-H~~givHrDlKp~NI 250 (495)
+.. -++++++++. .-+|||||++++.+.........+++.++..++.+++.+|..| |..||||+||++.||
T Consensus 83 l~~~Gv~vP~pi~~~------~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NI 156 (197)
T cd05146 83 MQKAGIPCPEVVVLK------KHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNM 156 (197)
T ss_pred HHHcCCCCCeEEEec------CCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 843 4566666542 2589999998753221111223466677788899999999999 899999999999999
Q ss_pred eeCCCCcEEEeeccccccc
Q 011041 251 LIDNEGILTIADFGLASFF 269 (495)
Q Consensus 251 Ll~~~~~vkL~DFG~a~~~ 269 (495)
|++ ++.+.|+|||.+...
T Consensus 157 L~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 157 LWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred EEE-CCcEEEEECCCceeC
Confidence 997 478999999988654
No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.50 E-value=1.8e-14 Score=152.35 Aligned_cols=146 Identities=18% Similarity=0.257 Sum_probs=98.5
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCC---------------------------Ch-----HHHHH-
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL---------------------------EP-----ESVRF- 163 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~---------------------------~~-----~~~~~- 163 (495)
...|+. +.||.|++|+||+|+.+.+|+.||||+++..-. .. +..+.
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345666 789999999999999988899999999975410 00 11122
Q ss_pred -----HHHHHHHHHhC----CCCCeeeeeceeeccCCceeEEEEeeccCChhhhhh--CCCC----CCCHHHHHHHHHHH
Q 011041 164 -----MAREILILRRL----DHPNVVKLEGLVTSRMSCSLYLVFKYMEHDLAGLAA--SPTI----KFTQAQVKCYMHQL 228 (495)
Q Consensus 164 -----~~~Ei~il~~l----~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~----~l~e~~~~~i~~qi 228 (495)
+.+|+..+.++ .+.+.+.+-.++.+- ....+|||||+.|.-+.... ...+ .+.+..+..++.||
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~-st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDY-CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeeccc-CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 33344444443 233333333333322 34578999999986554321 1111 35566666677776
Q ss_pred HHHHHHhhhCCceeccCCCCCeeeCCCC----cEEEeecccccccCC
Q 011041 229 LSGLEHCHNQHVLHRDIKGSNLLIDNEG----ILTIADFGLASFFDP 271 (495)
Q Consensus 229 l~~L~~LH~~givHrDlKp~NILl~~~~----~vkL~DFG~a~~~~~ 271 (495)
+ ..|++|+|+||.||+|+.+| .++++|||++..++.
T Consensus 277 f-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 F-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred H-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 5 48999999999999999988 999999999987654
No 440
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.49 E-value=1.1e-13 Score=144.36 Aligned_cols=142 Identities=18% Similarity=0.202 Sum_probs=94.2
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCCCh----------------------------H----H------HHHHH
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEP----------------------------E----S------VRFMA 165 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~----------------------------~----~------~~~~~ 165 (495)
+.||.|++|+||+|+.+ +|+.||||+.+..-... . . .-.+.
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 56999999999999865 78999999986432100 0 0 00244
Q ss_pred HHHHHHHhC----CCCCeeeeeceeeccCCceeEEEEeeccCChhhhhhCC-CCCCCHHHHHHHHHHHHH-HHHHhhhCC
Q 011041 166 REILILRRL----DHPNVVKLEGLVTSRMSCSLYLVFKYMEHDLAGLAASP-TIKFTQAQVKCYMHQLLS-GLEHCHNQH 239 (495)
Q Consensus 166 ~Ei~il~~l----~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~l~e~~~~~i~~qil~-~L~~LH~~g 239 (495)
+|+..+.++ .|.+-+.+-.++.+. ....+|||||++|..+...... ...+. ...++.+++. .+..+|..|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDR-TSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhh-cCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCC
Confidence 556555555 233333333333222 2346999999998655443221 11122 2345555555 478899999
Q ss_pred ceeccCCCCCeeeCCCCcEEEeecccccccC
Q 011041 240 VLHRDIKGSNLLIDNEGILTIADFGLASFFD 270 (495)
Q Consensus 240 ivHrDlKp~NILl~~~~~vkL~DFG~a~~~~ 270 (495)
++|+|+||.||+++.+|.++|+|||++..++
T Consensus 278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999997664
No 441
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.48 E-value=7.8e-13 Score=138.22 Aligned_cols=169 Identities=19% Similarity=0.295 Sum_probs=127.4
Q ss_pred EEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCChhhhhhCCCCC
Q 011041 136 KARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHDLAGLAASPTIK 215 (495)
Q Consensus 136 ~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~ 215 (495)
.|..+.++.+|.+...+.... .......+-++-|+.|+||||+++++.++. +..+|||+|-+.--. .... .
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~--~~~~ylvTErV~Pl~--~~lk---~ 100 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEE--EGTLYLVTERVRPLE--TVLK---E 100 (690)
T ss_pred ccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcc--cCceEEEeeccccHH--HHHH---H
Confidence 456677888999988875543 445667788999999999999999999987 568999999876311 1111 2
Q ss_pred CCHHHHHHHHHHHHHHHHHhh-hCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccccccCCCCCcccccC
Q 011041 216 FTQAQVKCYMHQLLSGLEHCH-NQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVVTLWYRPPELLLG 294 (495)
Q Consensus 216 l~e~~~~~i~~qil~~L~~LH-~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~ 294 (495)
+....+...+.||+.||.||| ..+++|++|.-.-|+|+..|..||++|-++........ ......---.|..|+.+..
T Consensus 101 l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 101 LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCc
Confidence 336777888999999999997 67899999999999999999999999999865532221 1111122233777775432
Q ss_pred CCCCCchhhHHHHHHHHHHHHhC
Q 011041 295 ATDYGVGVDLWSAGCILAELLAE 317 (495)
Q Consensus 295 ~~~~~~~~DvwSlGvil~elltG 317 (495)
-+...|.|-|||++++++.|
T Consensus 180 ---s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 180 ---SEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ---cccchhhhhHHHHHHHHhCc
Confidence 12457999999999999998
No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.44 E-value=4.9e-13 Score=121.34 Aligned_cols=127 Identities=14% Similarity=0.138 Sum_probs=94.3
Q ss_pred eeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCe-eeeeceeeccCCceeEEEEeec
Q 011041 123 LDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNV-VKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 123 ~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~~~~~~~~~~~~~lv~e~~ 201 (495)
++.|+.|.++.||+++.. +..|++|+...... ....+.+|+.+++.+.+.++ ++++.+... ..++||||+
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~----~~~lv~e~i 73 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFDPE----TGVLITEFI 73 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEeCC----CCeEEEEec
Confidence 467899999999999754 78899998754321 12245689999999865554 455544322 348999999
Q ss_pred cCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCc-----eeccCCCCCeeeCCCCcEEEeeccccc
Q 011041 202 EHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHV-----LHRDIKGSNLLIDNEGILTIADFGLAS 267 (495)
Q Consensus 202 ~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~gi-----vHrDlKp~NILl~~~~~vkL~DFG~a~ 267 (495)
++..+... ......++.+++.+|..||..++ +|+|++|.||+++ ++.++|+|||.+.
T Consensus 74 ~G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 74 EGSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred CCCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 98654322 01123457899999999999885 9999999999999 6789999999875
No 443
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.42 E-value=4.1e-14 Score=135.80 Aligned_cols=239 Identities=20% Similarity=0.192 Sum_probs=152.8
Q ss_pred EEEEEEECCCCeEEEeEEEecCCC-C-hHHHHHHHHHHHHHHhCCCCCeeeeeceeeccC---CceeEEEEeeccCChhh
Q 011041 133 NVYKARDTLTGQIVALKKVRFDNL-E-PESVRFMAREILILRRLDHPNVVKLEGLVTSRM---SCSLYLVFKYMEHDLAG 207 (495)
Q Consensus 133 ~Vy~a~~~~~g~~vAiK~i~~~~~-~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~---~~~~~lv~e~~~~~l~~ 207 (495)
.||++-++..|..|..-.+..... + ....+....-..-|-++.|.|||+++.|+.+.. ...+.++.|||..+.+.
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~ 160 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLK 160 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHH
Confidence 467777777776665554432211 0 111112222233455567999999999997632 24578889999976554
Q ss_pred hhh----CCCCCCCHHHHHHHHHHHHHHHHHhhhC--CceeccCCCCCeeeCCCCcEEEeecccccccCCCCC----CCC
Q 011041 208 LAA----SPTIKFTQAQVKCYMHQLLSGLEHCHNQ--HVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK----QPM 277 (495)
Q Consensus 208 ~~~----~~~~~l~e~~~~~i~~qil~~L~~LH~~--givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~----~~~ 277 (495)
..+ .....+.....++|+-||+.||.|||+. -|+|+++...-|++..+|-+|++---... +.+.-. ...
T Consensus 161 ~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~~~~~Ek 239 (458)
T KOG1266|consen 161 QFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNSTREAEK 239 (458)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccc-cchhhhhhhHhhh
Confidence 333 3455688899999999999999999976 49999999999999999999975221111 100000 001
Q ss_pred ccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccC
Q 011041 278 TSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPI-MPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIF 356 (495)
Q Consensus 278 ~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~p-f~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 356 (495)
....+-++|.+||.=.. ...+.++|||++|....+|..|.-- -.+....+.-..|.+.......
T Consensus 240 ~~~~~~~g~~a~~sg~~-tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~len-------------- 304 (458)
T KOG1266|consen 240 SVNTSLPGFSAPESGTT-TNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLEN-------------- 304 (458)
T ss_pred hccccCCccccCCcCcc-cccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeeccC--------------
Confidence 12245678999995332 3456789999999999999887642 2222222222222221111100
Q ss_pred CCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 357 KPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 357 ~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
+--.++|.+||.-.|..||++.++|.||.+-
T Consensus 305 ------------------~lqr~~i~kcl~~eP~~rp~ar~llfHpllf 335 (458)
T KOG1266|consen 305 ------------------GLQRGSITKCLEGEPNGRPDARLLLFHPLLF 335 (458)
T ss_pred ------------------ccccCcCcccccCCCCCCcchhhhhcCceee
Confidence 1112369999999999999999999999854
No 444
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.25 E-value=6e-11 Score=112.22 Aligned_cols=142 Identities=18% Similarity=0.229 Sum_probs=105.1
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCC--CCeeeeeceeeccC-CceeEEEEee
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDH--PNVVKLEGLVTSRM-SCSLYLVFKY 200 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H--pnIv~l~~~~~~~~-~~~~~lv~e~ 200 (495)
+.|+.|.++.||++.... |..|++|+....... .....+.+|+.+++.+.+ .++++++.+..... ....++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 578999999999998643 678999987654321 134567889999999975 34566766654421 1356899999
Q ss_pred ccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhh-------------------------------------------
Q 011041 201 MEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHN------------------------------------------- 237 (495)
Q Consensus 201 ~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~------------------------------------------- 237 (495)
++|..+...... ..+++.+...++.+++.+|.+||+
T Consensus 82 i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 82 VDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred eCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 998755443321 356777777888888888888873
Q ss_pred -------------CCceeccCCCCCeeeCC--CCcEEEeecccccc
Q 011041 238 -------------QHVLHRDIKGSNLLIDN--EGILTIADFGLASF 268 (495)
Q Consensus 238 -------------~givHrDlKp~NILl~~--~~~vkL~DFG~a~~ 268 (495)
..++|+|++|.|||++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 24699999999999998 67789999998864
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.24 E-value=7.7e-11 Score=105.87 Aligned_cols=133 Identities=22% Similarity=0.243 Sum_probs=95.3
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEE-ecCCCChHH-----HHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEE
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKV-RFDNLEPES-----VRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i-~~~~~~~~~-----~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv 197 (495)
..+++|+-+.+|.+.. -|..+.+|.- .+....++. .....+|+.++.++.--.|...+=+..+ ...-.|+
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD--~~~~~I~ 77 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD--PDNGLIV 77 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc--CCCCEEE
Confidence 3578999999999854 3445666643 222222222 3456689999999864444333323333 3346899
Q ss_pred EeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccc
Q 011041 198 FKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASF 268 (495)
Q Consensus 198 ~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~ 268 (495)
|||++|.++....... ...+++.+-.-+.-||..||||+||.++||++..++ +.++|||++.+
T Consensus 78 me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 78 MEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888655443 256778888888999999999999999999998765 99999999864
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.24 E-value=1.2e-10 Score=104.28 Aligned_cols=143 Identities=16% Similarity=0.272 Sum_probs=100.7
Q ss_pred eeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-Ch-----HHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeE
Q 011041 122 KLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-EP-----ESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 122 ~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-~~-----~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 195 (495)
.+..|-+|+-+.|+++. ..|+.+.||.-..... .+ -......+|+++|.++.--.|.-..-++.+ ...-.
T Consensus 11 ~l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D--~~~~~ 86 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFID--TYGGQ 86 (229)
T ss_pred cceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEe--cCCCe
Confidence 56789999999999995 5688888885322221 11 123567789999999864445333334444 23457
Q ss_pred EEEeeccC--ChhhhhhCCCCCCCHH-HHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCC---cEEEeecccccc
Q 011041 196 LVFKYMEH--DLAGLAASPTIKFTQA-QVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEG---ILTIADFGLASF 268 (495)
Q Consensus 196 lv~e~~~~--~l~~~~~~~~~~l~e~-~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~---~vkL~DFG~a~~ 268 (495)
|+|||++| .+...+......-.+. ....++++|-..|.-||.++|||+||..+||+|..+| .+.|+|||++..
T Consensus 87 i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 87 IYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 89999998 4444443322222233 3378999999999999999999999999999997765 358999999864
No 447
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.15 E-value=3.2e-10 Score=104.54 Aligned_cols=127 Identities=24% Similarity=0.271 Sum_probs=83.0
Q ss_pred EEEEEEECCCCeEEEeEEEecCCC------------------------ChHHHHHHHHHHHHHHhCCCC--Ceeeeecee
Q 011041 133 NVYKARDTLTGQIVALKKVRFDNL------------------------EPESVRFMAREILILRRLDHP--NVVKLEGLV 186 (495)
Q Consensus 133 ~Vy~a~~~~~g~~vAiK~i~~~~~------------------------~~~~~~~~~~Ei~il~~l~Hp--nIv~l~~~~ 186 (495)
.||.|.. ..|..+|||+.+.... ..-......+|.+.|.++..- ++++++++.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3899985 4678999998753210 011234567899999999765 567776543
Q ss_pred eccCCceeEEEEeecc--CChhhhhhCCCCCCCHHHHHHHHHHHHHHHHH-hhhCCceeccCCCCCeeeCCCCcEEEeec
Q 011041 187 TSRMSCSLYLVFKYME--HDLAGLAASPTIKFTQAQVKCYMHQLLSGLEH-CHNQHVLHRDIKGSNLLIDNEGILTIADF 263 (495)
Q Consensus 187 ~~~~~~~~~lv~e~~~--~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~-LH~~givHrDlKp~NILl~~~~~vkL~DF 263 (495)
. -+|||||++ |..+..+... .++......++.+++..+.. +|..||||+||.+.|||++++ .+.|+||
T Consensus 80 ~------~~ivME~I~~~G~~~~~l~~~--~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 R------NVIVMEYIGEDGVPLPRLKDV--DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp T------TEEEEE--EETTEEGGCHHHC--GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--G
T ss_pred C------CEEEEEecCCCccchhhHHhc--cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEec
Confidence 2 379999999 5444333222 12244567788888885555 579999999999999999987 8999999
Q ss_pred cccccc
Q 011041 264 GLASFF 269 (495)
Q Consensus 264 G~a~~~ 269 (495)
|.+...
T Consensus 151 ~qav~~ 156 (188)
T PF01163_consen 151 GQAVDS 156 (188)
T ss_dssp TTEEET
T ss_pred Ccceec
Confidence 988654
No 448
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.13 E-value=1.6e-09 Score=110.41 Aligned_cols=215 Identities=19% Similarity=0.234 Sum_probs=154.7
Q ss_pred CceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeec--cCCceeEEEEeeccCC--h
Q 011041 130 TYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTS--RMSCSLYLVFKYMEHD--L 205 (495)
Q Consensus 130 ~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~~~~lv~e~~~~~--l 205 (495)
--.+.|+|....+|..|++|.+.-...... .....-+++++++.|+|||.+.++|.. -.+..+++|++|.++. |
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~--nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST--NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc--ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 346889999999999999999943322111 122234778999999999999998862 2356899999999863 4
Q ss_pred hhhhhC--------------CCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 206 AGLAAS--------------PTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 206 ~~~~~~--------------~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
..++.. .+...+|..+|.|+.||..||.++|+.|+..+-|.|.+||++.+-+++|...|+......
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 443322 233578999999999999999999999999999999999999999999988887765543
Q ss_pred CCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHHhcCCCChhhhhhCCC
Q 011041 272 NHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPG-RTEVEQLHKIFKLCGSPSEEYWKKSKL 350 (495)
Q Consensus 272 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~-~~~~~~~~~i~~~~g~~~~~~~~~~~~ 350 (495)
... |.+.+ -.+-|.=.||.+++.|.||..--.. ...... +
T Consensus 446 d~~---------------~~le~----~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s-~------------------- 486 (655)
T KOG3741|consen 446 DPT---------------EPLES----QQQNDLRDLGLLLLALATGTENSNRTDSTQSS-H------------------- 486 (655)
T ss_pred CCC---------------cchhH----HhhhhHHHHHHHHHHHhhcccccccccchHHH-H-------------------
Confidence 321 11222 2356999999999999999542111 111111 0
Q ss_pred CCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhC
Q 011041 351 PHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRS 401 (495)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~h 401 (495)
+......++.++.++|..+...++.+ -++.++|.|
T Consensus 487 ---------------~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 487 ---------------LTRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred ---------------HHHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 11222346778888999999999887 778888764
No 449
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.12 E-value=3e-11 Score=126.97 Aligned_cols=156 Identities=21% Similarity=0.302 Sum_probs=115.9
Q ss_pred HHHHHHHHhh-hCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCc--------cccccCCCCCcccccCCCC
Q 011041 227 QLLSGLEHCH-NQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMT--------SRVVTLWYRPPELLLGATD 297 (495)
Q Consensus 227 qil~~L~~LH-~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~--------~~~gt~~y~aPE~l~~~~~ 297 (495)
+...||.|+| +.++||++|.|++|.++..|..||+.|+++....+....+.. -..-...|.|||++.+ ..
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-~~ 185 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-TT 185 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-cc
Confidence 3449999999 468999999999999999999999999998765442221111 1123567999999877 56
Q ss_pred CCchhhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCC
Q 011041 298 YGVGVDLWSAGCILAELL-AEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPS 376 (495)
Q Consensus 298 ~~~~~DvwSlGvil~ell-tG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 376 (495)
.+.++|++||||++|.+. .|++.|.+.+.......-....+. . ....-..+|++
T Consensus 186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~--------------~-----------~~~~s~~~p~e 240 (700)
T KOG2137|consen 186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNA--------------G-----------AFGYSNNLPSE 240 (700)
T ss_pred ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccc--------------c-----------cccccccCcHH
Confidence 789999999999999999 788887765433322211111000 0 01111568899
Q ss_pred cHHHHHHhccCCCCCccCHHHHHhCCCCCCCC
Q 011041 377 SLPLIETLLAIDPAERQTATAALRSEFFTTKP 408 (495)
Q Consensus 377 ~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~ 408 (495)
+.+=|.++|..|+..||++.+++..|||.+..
T Consensus 241 l~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~ 272 (700)
T KOG2137|consen 241 LRESLKKLLNGDSAVRPTLDLLLSIPFFSDPG 272 (700)
T ss_pred HHHHHHHHhcCCcccCcchhhhhcccccCCch
Confidence 99999999999999999999999999998744
No 450
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.02 E-value=3.9e-09 Score=102.99 Aligned_cols=133 Identities=15% Similarity=0.084 Sum_probs=90.3
Q ss_pred EEEEEEECCCCeEEEeEEEecCCCCh---------HHHHHHHHHHHHHHhCCCCCee--eeeceeeccC---CceeEEEE
Q 011041 133 NVYKARDTLTGQIVALKKVRFDNLEP---------ESVRFMAREILILRRLDHPNVV--KLEGLVTSRM---SCSLYLVF 198 (495)
Q Consensus 133 ~Vy~a~~~~~g~~vAiK~i~~~~~~~---------~~~~~~~~Ei~il~~l~HpnIv--~l~~~~~~~~---~~~~~lv~ 198 (495)
.|+++. ..|+.|.||......... .....+.+|...+..|..-+|. .++.+.+... ....+|||
T Consensus 37 rvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 355553 356788899663322110 0111367888888888544443 3344554321 23478999
Q ss_pred eeccCC-hhhhhhCC--CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCC-------CCcEEEeeccccc
Q 011041 199 KYMEHD-LAGLAASP--TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDN-------EGILTIADFGLAS 267 (495)
Q Consensus 199 e~~~~~-l~~~~~~~--~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~-------~~~vkL~DFG~a~ 267 (495)
|++++. .+..+... ....++.....++.+|+..+.-||..||+|+||++.||||+. ++.+.|+||+.+.
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 999984 33333221 234567788899999999999999999999999999999975 4679999999875
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.95 E-value=3.6e-09 Score=100.60 Aligned_cols=137 Identities=24% Similarity=0.240 Sum_probs=102.7
Q ss_pred eeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCC--------------------hHHHHHHHHHHHHHHhCCCC--
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLE--------------------PESVRFMAREILILRRLDHP-- 177 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~--------------------~~~~~~~~~Ei~il~~l~Hp-- 177 (495)
+.++..||.|--+.||.|.+. .|..+|||.=+....+ .......++|.++|++|.-.
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 456788999999999999866 6889999975422110 11233467899999999644
Q ss_pred CeeeeeceeeccCCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCc
Q 011041 178 NVVKLEGLVTSRMSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGI 257 (495)
Q Consensus 178 nIv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~ 257 (495)
.+++.+++ +.-.+||||++|-.+.... ++...+..++..|+.-+.-+-..||||+|+.+=|||+++||.
T Consensus 172 ~VP~P~~~------nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 172 KVPKPIAW------NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD 240 (304)
T ss_pred CCCCcccc------ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC
Confidence 67776653 3458999999985544322 234555667777777777777999999999999999999999
Q ss_pred EEEeecccccc
Q 011041 258 LTIADFGLASF 268 (495)
Q Consensus 258 vkL~DFG~a~~ 268 (495)
+.++||--+..
T Consensus 241 ~~vIDwPQ~v~ 251 (304)
T COG0478 241 IVVIDWPQAVP 251 (304)
T ss_pred EEEEeCccccc
Confidence 99999986654
No 452
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.95 E-value=1.5e-08 Score=101.20 Aligned_cols=252 Identities=14% Similarity=0.113 Sum_probs=153.5
Q ss_pred eeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHh-CCCCCeeeeec-----eeeccCCceeEE
Q 011041 123 LDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRR-LDHPNVVKLEG-----LVTSRMSCSLYL 196 (495)
Q Consensus 123 ~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~-l~HpnIv~l~~-----~~~~~~~~~~~l 196 (495)
.+.||+|+-+.+|-.- +-+.. +.|+.......... + -+..|.. -+||-+-.-+. .+-.+....+-+
T Consensus 16 gr~LgqGgea~ly~l~--e~~d~-VAKIYh~Pppa~~a--q---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 16 GRPLGQGGEADLYTLG--EVRDQ-VAKIYHAPPPAAQA--Q---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CccccCCccceeeecc--hhhch-hheeecCCCchHHH--H---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 4679999999999652 22333 44777654322111 1 1222333 35664432111 011111233667
Q ss_pred EEeeccCC--hhhhhh-----CCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeeccccccc
Q 011041 197 VFKYMEHD--LAGLAA-----SPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFF 269 (495)
Q Consensus 197 v~e~~~~~--l~~~~~-----~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~ 269 (495)
.|..+.+- ...++. +....+.+..+..+.+.|+.+...||+.|.+-+|+.++||||.+++.|.|+|=..-...
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~ 167 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN 167 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeec
Confidence 78777652 221111 22334677889999999999999999999999999999999999999999986544333
Q ss_pred CCCCCCCCccccccCCCCCccccc-C---CCCCCchhhHHHHHHHHHHHHhC-CCCCCCCC-------hHHHHHHHHHhc
Q 011041 270 DPNHKQPMTSRVVTLWYRPPELLL-G---ATDYGVGVDLWSAGCILAELLAE-KPIMPGRT-------EVEQLHKIFKLC 337 (495)
Q Consensus 270 ~~~~~~~~~~~~gt~~y~aPE~l~-~---~~~~~~~~DvwSlGvil~elltG-~~pf~~~~-------~~~~~~~i~~~~ 337 (495)
. +.......+|...|.+||.-. + .-.-+...|.|-||+++|+||.| ..||.|.. ..+. .|....
T Consensus 168 ~--ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~--~Ia~g~ 243 (637)
T COG4248 168 A--NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET--DIAHGR 243 (637)
T ss_pred c--CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh--hhhcce
Confidence 2 223345568999999999753 1 11235678999999999999986 89998732 1110 111111
Q ss_pred CCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccC--CCCCccCHHHHH
Q 011041 338 GSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAI--DPAERQTATAAL 399 (495)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~--dP~~R~ta~elL 399 (495)
.....+- ..-.++ ....--+..+++++..|+..|+.. ++.-|||++..+
T Consensus 244 f~ya~~~--------~~g~~p-----~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~ 294 (637)
T COG4248 244 FAYASDQ--------RRGLKP-----PPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWV 294 (637)
T ss_pred eeechhc--------cCCCCC-----CCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHH
Confidence 0000000 000000 112233456789999999999874 467899987654
No 453
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.84 E-value=3.3e-08 Score=92.99 Aligned_cols=107 Identities=18% Similarity=0.192 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHhCCCCC--eeeeeceeeccCC--ceeEEEEeeccCC-hhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 011041 162 RFMAREILILRRLDHPN--VVKLEGLVTSRMS--CSLYLVFKYMEHD-LAGLAASPTIKFTQAQVKCYMHQLLSGLEHCH 236 (495)
Q Consensus 162 ~~~~~Ei~il~~l~Hpn--Iv~l~~~~~~~~~--~~~~lv~e~~~~~-l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH 236 (495)
....+|...+..|..-+ +++.+++.+.... ...++|+|++++. .+..+......++......++.+|...+.-||
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH 135 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH 135 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence 35677888888874333 3455555554222 3458999999873 34444433223677788899999999999999
Q ss_pred hCCceeccCCCCCeeeCCCC---cEEEeecccccc
Q 011041 237 NQHVLHRDIKGSNLLIDNEG---ILTIADFGLASF 268 (495)
Q Consensus 237 ~~givHrDlKp~NILl~~~~---~vkL~DFG~a~~ 268 (495)
.+||+|+|+++.||||+.++ .+.|+||+.+..
T Consensus 136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999999999999999887 899999998764
No 454
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.74 E-value=2e-07 Score=88.07 Aligned_cols=139 Identities=20% Similarity=0.228 Sum_probs=98.3
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCCChH----------------------HHHHHHHHHHHHHhCC--CCCe
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPE----------------------SVRFMAREILILRRLD--HPNV 179 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~----------------------~~~~~~~Ei~il~~l~--HpnI 179 (495)
..|..|--+.||+|.. .++..||+|+.+....... .......|..-|+++. +-.+
T Consensus 54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv 132 (268)
T COG1718 54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV 132 (268)
T ss_pred eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3678888889999973 5688999999864321111 1112446777788773 4455
Q ss_pred eeeeceeeccCCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceeccCCCCCeeeCCCCcE
Q 011041 180 VKLEGLVTSRMSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHN-QHVLHRDIKGSNLLIDNEGIL 258 (495)
Q Consensus 180 v~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~-~givHrDlKp~NILl~~~~~v 258 (495)
++.+++.. -.|||||++..-.-.=......+...++..+..+++..+.-|-. .|+||+||..=|||+. ++.+
T Consensus 133 P~Pi~~~~------nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p 205 (268)
T COG1718 133 PEPIAFRN------NVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEP 205 (268)
T ss_pred CCceeecC------CeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeE
Confidence 66666554 37999999876211111112234444788889999999998876 9999999999999999 8899
Q ss_pred EEeecccccccC
Q 011041 259 TIADFGLASFFD 270 (495)
Q Consensus 259 kL~DFG~a~~~~ 270 (495)
.|+|||-|....
T Consensus 206 ~iID~~QaV~~~ 217 (268)
T COG1718 206 YIIDVSQAVTID 217 (268)
T ss_pred EEEECccccccC
Confidence 999999886543
No 455
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.67 E-value=9.1e-08 Score=101.06 Aligned_cols=139 Identities=23% Similarity=0.330 Sum_probs=87.5
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCC---------------------------CCh-HH----------HHHHH
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDN---------------------------LEP-ES----------VRFMA 165 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~---------------------------~~~-~~----------~~~~~ 165 (495)
+.|+.++-|+||+|+.+ +|+.||||+.+..- ... +. .-.+.
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 56999999999999965 49999999986431 000 00 11234
Q ss_pred HHHHHHHhC-----CCCCeeeeeceeeccCCceeEEEEeeccCChhhhhh-CCCCCCC-----HHHHHHHHHHHHHHHHH
Q 011041 166 REILILRRL-----DHPNVVKLEGLVTSRMSCSLYLVFKYMEHDLAGLAA-SPTIKFT-----QAQVKCYMHQLLSGLEH 234 (495)
Q Consensus 166 ~Ei~il~~l-----~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~-~~~~~l~-----e~~~~~i~~qil~~L~~ 234 (495)
+|+.-+.++ +.++|. +=.+|.+- ...-.|+|||++|--..... .....++ +.-+..++.|++
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~-VP~V~we~-t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~----- 282 (517)
T COG0661 210 REAANAERFRENFKDDPDVY-VPKVYWEY-TTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLL----- 282 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeE-eceeehhc-cCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHH-----
Confidence 555555554 233332 21222211 34568999999984332221 1112233 333334444443
Q ss_pred hhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCC
Q 011041 235 CHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPN 272 (495)
Q Consensus 235 LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~ 272 (495)
..|++|.|.+|.||+++.+|.+.+.|||+...+++.
T Consensus 283 --~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 283 --RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred --hcCccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 489999999999999999999999999999776543
No 456
>PRK09902 hypothetical protein; Provisional
Probab=98.65 E-value=4.7e-07 Score=84.30 Aligned_cols=139 Identities=14% Similarity=0.190 Sum_probs=97.7
Q ss_pred cccCceEEEEEEECCCCeEEEeEEEecC---CCC-hHHHHHHHHHHHHHHhCCCCC--eeeeeceee---ccCCceeEEE
Q 011041 127 GQGTYSNVYKARDTLTGQIVALKKVRFD---NLE-PESVRFMAREILILRRLDHPN--VVKLEGLVT---SRMSCSLYLV 197 (495)
Q Consensus 127 G~G~~g~Vy~a~~~~~g~~vAiK~i~~~---~~~-~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~~~---~~~~~~~~lv 197 (495)
|+|+-+-|+.... .|..|=+|..... ... +.....+.+|+..|+.|..-+ ++++. ++. .......+||
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 6688888888643 3446778875411 111 334567889999999985433 34443 222 2223457899
Q ss_pred EeeccC--ChhhhhhCC-CCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCc--EEEeecccccc
Q 011041 198 FKYMEH--DLAGLAASP-TIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGI--LTIADFGLASF 268 (495)
Q Consensus 198 ~e~~~~--~l~~~~~~~-~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~--vkL~DFG~a~~ 268 (495)
+|-+++ +|...+... ....++.....++.+|+..|.-||..|+.|+|+-+.|||++.+|. |+++||--++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 998884 454443332 235677888899999999999999999999999999999987777 99999987653
No 457
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.65 E-value=6.4e-09 Score=108.53 Aligned_cols=248 Identities=16% Similarity=0.097 Sum_probs=166.4
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCC-eeeeeceeeccCCceeEE
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPN-VVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~~~~~~l 196 (495)
.-|....-+++|+++.+++.+...+...+ .+.+... ....-++++|.+++||| .+..++-++. +.+.++
T Consensus 242 kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~~~--E~~~~i 311 (829)
T KOG0576|consen 242 KWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDYDG--EDYLWI 311 (829)
T ss_pred cchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-------hhhHHHHHHHHHccCCCCcccccccCCc--ccccch
Confidence 34566677899999999999877666555 6665432 23445889999999999 4444443333 568899
Q ss_pred EEeeccCC--hhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 011041 197 VFKYMEHD--LAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADFGLASFFDPNHK 274 (495)
Q Consensus 197 v~e~~~~~--l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~ 274 (495)
+++++.++ ...........|.+-+...+.+.-+.+|+|||+.-=+|+| |||..+ +..|+.||+....+....
T Consensus 312 ~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~- 385 (829)
T KOG0576|consen 312 PMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM- 385 (829)
T ss_pred hhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc-
Confidence 99999876 2222222233455556667778888999999988778999 877766 779999999987665432
Q ss_pred CCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCc
Q 011041 275 QPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHAT 354 (495)
Q Consensus 275 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~ 354 (495)
...+..+|+.++|||+... ..+....|+|++|+-..+|.-|.+|-... ..........+...
T Consensus 386 -~~~t~~~~~~~~~pev~~~-~~~~~~p~~~~~~~~~~~~ap~~pPr~~P----------------~~~~~~~g~~p~s~ 447 (829)
T KOG0576|consen 386 -KPRTAIGTPEPLAPEVIQE-NTIDGCPDSGSLAVSAIQMAPGLPPRSSP----------------PAVLPMIGNGPNSP 447 (829)
T ss_pred -ccccCCCCCCCCCchhhcc-cccccCCCccCCCcchhhcCCCCCCCCCC----------------ccccCCCCCCCCcc
Confidence 3456688999999998876 56788899999998777777777765431 10000000000000
Q ss_pred cCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCCCCCC
Q 011041 355 IFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFTTKPY 409 (495)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~~~~~ 409 (495)
.... +..+.. ..-.++...||..-|..|+++..++-|.+|..-|.
T Consensus 448 ~L~~----~~aw~~------~~~~~~~~~~~~g~P~~pkv~mgacfsKvfngCpl 492 (829)
T KOG0576|consen 448 MLTD----KSAWSP------VFHRDFPAPCLNGLPPTPKVHMGACFSKVFNGCPL 492 (829)
T ss_pred ccch----hhhcCc------ccccCCcccccCCCCCCCcchhhHHHHHHhccCcc
Confidence 0000 000111 11114678899999999999999999999987554
No 458
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.56 E-value=1.2e-06 Score=81.86 Aligned_cols=140 Identities=16% Similarity=0.220 Sum_probs=88.0
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHH-HH------HHHHHHHHHHhCC---CCCeeeeecee
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPES-VR------FMAREILILRRLD---HPNVVKLEGLV 186 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~-~~------~~~~Ei~il~~l~---HpnIv~l~~~~ 186 (495)
..+|.+.+.+-......|.+. .-+|..+.+|..+......+. .. ...+++..+..+. --.+..++-+.
T Consensus 30 ~~~~~~~kv~k~~~r~~ValI--ei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALI--EIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred hCCceEEEeecCCCccEEEEE--EECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 367888888888887777766 356788999987644321110 00 1223444444442 22222222222
Q ss_pred ecc---CCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCCCcEEEeec
Q 011041 187 TSR---MSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNEGILTIADF 263 (495)
Q Consensus 187 ~~~---~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~~~vkL~DF 263 (495)
+-. .....+|+|||++|-.+.... .+++ .+...|..++.-||+.|++|+|+.|.|+++++++ ++++||
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~----~i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~iID~ 178 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIE----DIDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IRIIDT 178 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccch----hcCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-EEEEEC
Confidence 211 123457899999986543322 1233 2446677889999999999999999999998655 999999
Q ss_pred cccc
Q 011041 264 GLAS 267 (495)
Q Consensus 264 G~a~ 267 (495)
+...
T Consensus 179 ~~k~ 182 (229)
T PF06176_consen 179 QGKR 182 (229)
T ss_pred cccc
Confidence 8664
No 459
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.54 E-value=1.3e-06 Score=82.81 Aligned_cols=139 Identities=22% Similarity=0.314 Sum_probs=80.7
Q ss_pred eeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCC--Ceeeeeceeec-cCCceeEEEEe
Q 011041 123 LDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHP--NVVKLEGLVTS-RMSCSLYLVFK 199 (495)
Q Consensus 123 ~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp--nIv~l~~~~~~-~~~~~~~lv~e 199 (495)
++.|+.|..+.||++.... ..+++|..... .....+.+|+.+++.|... .+++++.+... ......+++|+
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~ 75 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLME 75 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEE
Confidence 5689999999999998654 48899986532 4556788899999988533 35566654322 22345799999
Q ss_pred eccCChhhh--------------------h-hC--CCCCCCHHH------HHHH---------------HHHHHH-HHHH
Q 011041 200 YMEHDLAGL--------------------A-AS--PTIKFTQAQ------VKCY---------------MHQLLS-GLEH 234 (495)
Q Consensus 200 ~~~~~l~~~--------------------~-~~--~~~~l~e~~------~~~i---------------~~qil~-~L~~ 234 (495)
++++..+.. + .. ....+.... .... ...+.. .+..
T Consensus 76 ~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (239)
T PF01636_consen 76 YIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQE 155 (239)
T ss_dssp EESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred EeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHH
Confidence 998753332 0 00 011111000 0000 111222 2333
Q ss_pred hh-------hCCceeccCCCCCeeeC-CCCcEEEeeccccc
Q 011041 235 CH-------NQHVLHRDIKGSNLLID-NEGILTIADFGLAS 267 (495)
Q Consensus 235 LH-------~~givHrDlKp~NILl~-~~~~vkL~DFG~a~ 267 (495)
++ ...++|+|+.|.|||++ .++.+-|+||+.+.
T Consensus 156 ~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 156 LEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 33 24699999999999999 66777899999774
No 460
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.50 E-value=1.1e-06 Score=83.74 Aligned_cols=134 Identities=16% Similarity=0.118 Sum_probs=80.4
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCC--eeeeeceeeccCCceeEEEEeec
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPN--VVKLEGLVTSRMSCSLYLVFKYM 201 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~~~~~~~~~~~lv~e~~ 201 (495)
..||+|..+.||+. .|..+++|...... ....+.+|.++++.+..-+ +++.+++..+ .....+|||++
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~--~~~~glv~e~i 76 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVED--GGRLGLIYELI 76 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEec--CCeeeeeeeec
Confidence 57899999999984 24567788875422 2234678999999985433 3566666654 44578899999
Q ss_pred cCCh-hh-h---------------------hhC-CCCCCCHHH-HHHHHHHH----------HH-HHHHhh----hCCce
Q 011041 202 EHDL-AG-L---------------------AAS-PTIKFTQAQ-VKCYMHQL----------LS-GLEHCH----NQHVL 241 (495)
Q Consensus 202 ~~~l-~~-~---------------------~~~-~~~~l~e~~-~~~i~~qi----------l~-~L~~LH----~~giv 241 (495)
+|.. .. . +.. ......... ...+..+| .. ...+|. ...++
T Consensus 77 ~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 156 (226)
T TIGR02172 77 VGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCL 156 (226)
T ss_pred CCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceE
Confidence 9841 10 0 000 000111111 00110010 11 112222 23478
Q ss_pred eccCCCCCeeeCCCCcEEEeecccccc
Q 011041 242 HRDIKGSNLLIDNEGILTIADFGLASF 268 (495)
Q Consensus 242 HrDlKp~NILl~~~~~vkL~DFG~a~~ 268 (495)
|+|+.|.||++++++ +.|+||+.+..
T Consensus 157 HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 157 HGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred ecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 999999999999988 99999998753
No 461
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.38 E-value=8.5e-06 Score=75.39 Aligned_cols=129 Identities=25% Similarity=0.313 Sum_probs=91.9
Q ss_pred CCeeeeeeecccCc-eEEEEEEECCCCeEEEeEEEec---CC-------CCh---------HHHHHHHHHHHHHHhC---
Q 011041 118 DTFEKLDKIGQGTY-SNVYKARDTLTGQIVALKKVRF---DN-------LEP---------ESVRFMAREILILRRL--- 174 (495)
Q Consensus 118 ~~y~~~~~LG~G~~-g~Vy~a~~~~~g~~vAiK~i~~---~~-------~~~---------~~~~~~~~Ei~il~~l--- 174 (495)
.+++.++.||.|.- |.||+++ -.|..||||++.. .. ... ....-|..|.+...+|
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~--I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVE--IDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEE--ECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 78999999999999 9999995 5688999999432 10 000 1233567788777776
Q ss_pred CCCCe--eeeeceeecc----------------CCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 011041 175 DHPNV--VKLEGLVTSR----------------MSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCH 236 (495)
Q Consensus 175 ~HpnI--v~l~~~~~~~----------------~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH 236 (495)
.+.++ |+++||+.-. .....-||.||+.... .+.. .-+.+|++-|..+|
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~----~~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQI----RDIPQMLRDLKILH 181 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccch----hHHHHHHHHHHHHH
Confidence 45566 9999987321 1123467888776543 1222 23678888899999
Q ss_pred hCCceeccCCCCCeeeCCCCcEEEeecccc
Q 011041 237 NQHVLHRDIKGSNLLIDNEGILTIADFGLA 266 (495)
Q Consensus 237 ~~givHrDlKp~NILl~~~~~vkL~DFG~a 266 (495)
..||+-+|+++.|.. .-||+|||.+
T Consensus 182 k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HCCeeeccCcccccc-----CCEEEecccC
Confidence 999999999999985 4589999965
No 462
>PLN02876 acyl-CoA dehydrogenase
Probab=98.31 E-value=8.9e-06 Score=92.12 Aligned_cols=148 Identities=22% Similarity=0.323 Sum_probs=91.5
Q ss_pred eeeeecccCceEEEEEEECCCC--eEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-CCCe--eeeeceeecc-CCceeE
Q 011041 122 KLDKIGQGTYSNVYKARDTLTG--QIVALKKVRFDNLEPESVRFMAREILILRRLD-HPNV--VKLEGLVTSR-MSCSLY 195 (495)
Q Consensus 122 ~~~~LG~G~~g~Vy~a~~~~~g--~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnI--v~l~~~~~~~-~~~~~~ 195 (495)
.++.|+.|.+..+|+......+ ..+++|+....... .....+.+|+.+|+.|. |.+| ++++.++.+. ..+..|
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~-~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~f 120 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLL-QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAF 120 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccC-ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCce
Confidence 3577899999999998765432 46778876443221 12346889999999995 6665 6777766542 124578
Q ss_pred EEEeeccCChhhh------------------------hhC-C--C-------C--CCCHHHHHHHHHH------------
Q 011041 196 LVFKYMEHDLAGL------------------------AAS-P--T-------I--KFTQAQVKCYMHQ------------ 227 (495)
Q Consensus 196 lv~e~~~~~l~~~------------------------~~~-~--~-------~--~l~e~~~~~i~~q------------ 227 (495)
+||||++|..... +.. . . . .+...++..|..+
T Consensus 121 lVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~ 200 (822)
T PLN02876 121 YIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPR 200 (822)
T ss_pred EEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCC
Confidence 9999998753110 000 0 0 0 0112233322221
Q ss_pred ---HHHHHHHhhh-----------CCceeccCCCCCeeeCCC-Cc-EEEeecccccccC
Q 011041 228 ---LLSGLEHCHN-----------QHVLHRDIKGSNLLIDNE-GI-LTIADFGLASFFD 270 (495)
Q Consensus 228 ---il~~L~~LH~-----------~givHrDlKp~NILl~~~-~~-vkL~DFG~a~~~~ 270 (495)
+...+.+|.. ..+||+|+++.|||++.+ +. +-|.||.++..-+
T Consensus 201 ~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~Gd 259 (822)
T PLN02876 201 NPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGN 259 (822)
T ss_pred ChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCC
Confidence 2233455631 359999999999999853 33 5799999987644
No 463
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.29 E-value=7.1e-06 Score=79.10 Aligned_cols=134 Identities=19% Similarity=0.200 Sum_probs=79.2
Q ss_pred eecccCc-eEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC-CCCeeeeeceeeccCCceeEEEEeecc
Q 011041 125 KIGQGTY-SNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLD-HPNVVKLEGLVTSRMSCSLYLVFKYME 202 (495)
Q Consensus 125 ~LG~G~~-g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~~~lv~e~~~ 202 (495)
.|-.|.+ ..||++.. .+..+.+|+..... ...+.+|+.+++.+. +--+++++++... ....++|||+++
T Consensus 5 ~~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~--~~~~~lv~e~i~ 75 (244)
T cd05150 5 RVTEGQSGATVYRLDG--KNPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSD--DGRAWLLTSAVP 75 (244)
T ss_pred ecCCCCCcCeEEEEcC--CCCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEec--CCccEEEEEeeC
Confidence 3445555 78999864 34677888765332 234667999988883 4446677776654 345789999998
Q ss_pred CChhhhhh--------------------C-C--CCCCCHH------HHHHH-------------------HHHHHHHHHH
Q 011041 203 HDLAGLAA--------------------S-P--TIKFTQA------QVKCY-------------------MHQLLSGLEH 234 (495)
Q Consensus 203 ~~l~~~~~--------------------~-~--~~~l~e~------~~~~i-------------------~~qil~~L~~ 234 (495)
|..+.... . . ...+... ..... ..+++.-|..
T Consensus 76 G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 155 (244)
T cd05150 76 GVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEA 155 (244)
T ss_pred CccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHh
Confidence 85333111 0 0 0011100 00000 1111111111
Q ss_pred h----hhCCceeccCCCCCeeeCCCCcEEEeeccccc
Q 011041 235 C----HNQHVLHRDIKGSNLLIDNEGILTIADFGLAS 267 (495)
Q Consensus 235 L----H~~givHrDlKp~NILl~~~~~vkL~DFG~a~ 267 (495)
. ....++|+|+.|.|||+++++.+.|+||+.+.
T Consensus 156 ~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 156 TRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred hCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 1 12358999999999999998888899999774
No 464
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.25 E-value=5e-06 Score=92.72 Aligned_cols=205 Identities=19% Similarity=0.176 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHhCCCCCeeeeeceeeccCCce--eEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 011041 161 VRFMAREILILRRLDHPNVVKLEGLVTSRMSCS--LYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQ 238 (495)
Q Consensus 161 ~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~--~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~ 238 (495)
.....-|+..+..+.|+|++.++.|-..+.... ..+..+++.........+.-...+...++.+..+++.||.|+|+.
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~ 305 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSL 305 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHh
Confidence 344556777788889999999988765432222 233446666655556666666789999999999999999999998
Q ss_pred CceeccCCCC---CeeeCCCCcEEEe--ecccccccCCCCCCCCccccccCCCCCcccccCCCCCC--chhhHHHHHHHH
Q 011041 239 HVLHRDIKGS---NLLIDNEGILTIA--DFGLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYG--VGVDLWSAGCIL 311 (495)
Q Consensus 239 givHrDlKp~---NILl~~~~~vkL~--DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~--~~~DvwSlGvil 311 (495)
...|.-|... +-.++.++.+.++ ||+....+..... ......+..+.++|.... ..+. ...|+|.+|..+
T Consensus 306 ~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~--~~~~~~~~~~~~~e~~~~-~~~~~~r~~dL~~lgll~ 382 (1351)
T KOG1035|consen 306 SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK--SFSDLLAEIRNADEDLKE-NTAKKSRLTDLWCLGLLL 382 (1351)
T ss_pred ccceeEEecccccccccCccceeecchhhhcccccCCCccc--chhhcCcccccccccccc-ccchhhhhhHHHHHHHHH
Confidence 6555555444 4444556677777 9998877654322 233445667888887654 2333 336999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCC-CCCCcHHHHHHhccCCCC
Q 011041 312 AELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKD-FPPSSLPLIETLLAIDPA 390 (495)
Q Consensus 312 ~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~Li~~~L~~dP~ 390 (495)
..+..|..+-.... .+. ..... +.....+++.+|+.-|++
T Consensus 383 ~~~~~~~~i~~~~~------~~~---------------------------------~~l~~~~~~~~~d~~~~~~~~~~~ 423 (1351)
T KOG1035|consen 383 LQLSQGEDISEKSA------VPV---------------------------------SLLDVLSTSELLDALPKCLDEDSE 423 (1351)
T ss_pred hhhhhcCccccccc------chh---------------------------------hhhccccchhhhhhhhhhcchhhh
Confidence 99988765321100 000 00011 112567789999999999
Q ss_pred CccCHHHHHhCCCCCCC
Q 011041 391 ERQTATAALRSEFFTTK 407 (495)
Q Consensus 391 ~R~ta~elL~hp~f~~~ 407 (495)
+|+.+.++|.|+|....
T Consensus 424 ~Rl~~~~ll~~~f~~~~ 440 (1351)
T KOG1035|consen 424 ERLSALELLTHPFLRFP 440 (1351)
T ss_pred hccchhhhhhchhcccc
Confidence 99999999999998753
No 465
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.23 E-value=7.1e-06 Score=73.63 Aligned_cols=130 Identities=22% Similarity=0.213 Sum_probs=90.5
Q ss_pred eeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCe-eeeeceeeccCCceeEEEEe
Q 011041 121 EKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNV-VKLEGLVTSRMSCSLYLVFK 199 (495)
Q Consensus 121 ~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~~~~~~~~~~~~~lv~e 199 (495)
...+.||+|.+|.||+|.+. |..+|+|+-+.+. ....++.|+++|..+.--++ .+++.+..+ ++.||
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds----~r~~l~kEakiLeil~g~~~~p~vy~yg~~------~i~me 92 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWR--GGEVALKVRRRDS----PRRNLEKEAKILEILAGEGVTPEVYFYGED------FIRME 92 (201)
T ss_pred hhhhhhhcccccEEEEeecc--CceEEEEEecCCc----chhhHHHHHHHHHHhhhcCCCceEEEechh------hhhhh
Confidence 34577999999999999754 6689999876543 34567789999999976655 455544433 55699
Q ss_pred eccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCC-CCCeeeCCCCcEEEeeccccccc
Q 011041 200 YMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIK-GSNLLIDNEGILTIADFGLASFF 269 (495)
Q Consensus 200 ~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlK-p~NILl~~~~~vkL~DFG~a~~~ 269 (495)
|+.|--+....... + ++-+..+++.---|-..||-|+.|. |..++|..++.+.|+||..|++-
T Consensus 93 ~i~G~~L~~~~~~~---~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 93 YIDGRPLGKLEIGG---D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred hhcCcchhhhhhcc---c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 99984443332211 1 2234455666556678899999986 56666666669999999999743
No 466
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.11 E-value=1.7e-05 Score=83.75 Aligned_cols=140 Identities=16% Similarity=0.150 Sum_probs=86.2
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCCCC-----------------------------hHHHH------HHHHHH
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLE-----------------------------PESVR------FMAREI 168 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~-----------------------------~~~~~------~~~~Ei 168 (495)
+.||.-+.|+||+|+.+. |+.||||+-+..-.. .+..+ .|.+|+
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 569999999999999776 999999987533100 00111 123344
Q ss_pred HHHHh----CCCCC------eeeeeceeeccCCceeEEEEeeccCCh---hhhhhCCCCCCCHHHHHHHHHHHHHHHHHh
Q 011041 169 LILRR----LDHPN------VVKLEGLVTSRMSCSLYLVFKYMEHDL---AGLAASPTIKFTQAQVKCYMHQLLSGLEHC 235 (495)
Q Consensus 169 ~il~~----l~Hpn------Iv~l~~~~~~~~~~~~~lv~e~~~~~l---~~~~~~~~~~l~e~~~~~i~~qil~~L~~L 235 (495)
+-..+ +.|-+ |++++-.+ .....|+||||+|.- +..+... .++...+...+.+...-+ +
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~----st~RVLtME~~~G~~i~Dl~~i~~~--gi~~~~i~~~l~~~~~~q--I 317 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDL----STKRVLTMEYVDGIKINDLDAIDKR--GISPHDILNKLVEAYLEQ--I 317 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhc----CcceEEEEEecCCccCCCHHHHHHc--CCCHHHHHHHHHHHHHHH--H
Confidence 33333 34555 44443332 335799999999842 2222222 344444433333332222 2
Q ss_pred hhCCceeccCCCCCeeeCC----CCcEEEeecccccccCCC
Q 011041 236 HNQHVLHRDIKGSNLLIDN----EGILTIADFGLASFFDPN 272 (495)
Q Consensus 236 H~~givHrDlKp~NILl~~----~~~vkL~DFG~a~~~~~~ 272 (495)
=..|++|+|-.|.||+|+. ++.+.+-|||+...+...
T Consensus 318 f~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 318 FKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred HhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 2468999999999999984 678999999998766543
No 467
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.05 E-value=2.9e-05 Score=74.47 Aligned_cols=72 Identities=14% Similarity=0.171 Sum_probs=43.2
Q ss_pred eeecccCce-EEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCC---CeeeeeceeeccCC-ceeEEEE
Q 011041 124 DKIGQGTYS-NVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHP---NVVKLEGLVTSRMS-CSLYLVF 198 (495)
Q Consensus 124 ~~LG~G~~g-~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp---nIv~l~~~~~~~~~-~~~~lv~ 198 (495)
+.|+.|+.. .||+. +..+.+|..... .....+.+|+++|..|... .+.++++....... ...|++|
T Consensus 3 ~~~~~gG~~n~vy~~-----~~~~VlR~~~~~----~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~ 73 (235)
T cd05155 3 EPVDSGGTDNATFRL-----GDDMSVRLPSAA----GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVY 73 (235)
T ss_pred eeccCCCcccceEEc-----CCceEEEcCCcc----chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEE
Confidence 457766666 59976 235677864431 1234688899999888532 34444443332111 2458899
Q ss_pred eeccCC
Q 011041 199 KYMEHD 204 (495)
Q Consensus 199 e~~~~~ 204 (495)
++++|.
T Consensus 74 ~~i~G~ 79 (235)
T cd05155 74 RWLEGE 79 (235)
T ss_pred EeecCC
Confidence 998873
No 468
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.97 E-value=1.8e-06 Score=97.91 Aligned_cols=256 Identities=13% Similarity=-0.011 Sum_probs=160.1
Q ss_pred CCCeeeeeeecccCceEEEEEEECCCCe-EEEeEEE---ecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCc
Q 011041 117 ADTFEKLDKIGQGTYSNVYKARDTLTGQ-IVALKKV---RFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSC 192 (495)
Q Consensus 117 ~~~y~~~~~LG~G~~g~Vy~a~~~~~g~-~vAiK~i---~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~ 192 (495)
+..|++.=-+|.|.+ +++.+..... -+.+|+. ....+.....+....|..-++...|+++.....-+....+.
T Consensus 1228 ~e~~EV~l~i~~~~~---~R~k~Lr~kid~Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ 1304 (2724)
T KOG1826|consen 1228 MEHSEVNLGISNHFH---FRNKWLRSKIDWFKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSEST 1304 (2724)
T ss_pred hhhhheeeeccccee---eccchHhhhhceeEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCCh
Confidence 345555544555544 3443321111 1233333 33334444455556666677778999999887777766677
Q ss_pred eeEEEEeeccCChhhhhhCC----CCCCCHHHHHHHHHHHHHHHHHhhhC-----CceeccCCCCCeeeCCCCcEEEeec
Q 011041 193 SLYLVFKYMEHDLAGLAASP----TIKFTQAQVKCYMHQLLSGLEHCHNQ-----HVLHRDIKGSNLLIDNEGILTIADF 263 (495)
Q Consensus 193 ~~~lv~e~~~~~l~~~~~~~----~~~l~e~~~~~i~~qil~~L~~LH~~-----givHrDlKp~NILl~~~~~vkL~DF 263 (495)
..|.+++|+.++.+..++.. ...+.+.-+.....+.+.+..-+|+. -.+|++||+-|.+|..+..+|++++
T Consensus 1305 ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~ 1384 (2724)
T KOG1826|consen 1305 EEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKG 1384 (2724)
T ss_pred HHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCccccccc
Confidence 78999999997766654432 22344444555555557777777743 2899999999999999999999999
Q ss_pred ccccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChh
Q 011041 264 GLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEE 343 (495)
Q Consensus 264 G~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~~~~ 343 (495)
|+.+...+ ........++++.|+.|++.. ...++.++|+|..|+.+|++..|.++|. ..+..+++.. ..+.
T Consensus 1385 gLdKIknp-~~sf~Gl~l~sp~~v~qli~N-~ik~t~rsdilr~s~~ly~rs~~n~~fi-----~flq~~Lkgi--idn~ 1455 (2724)
T KOG1826|consen 1385 GLDKIKNP-VLSFFGLELCSPIYVLQLIKN-EIKFTKRSDILRRSLSLYLRSDGNAYFI-----FFLQPALKGI--IDNH 1455 (2724)
T ss_pred ccccccCc-hHhhhhhhhCCHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHHhcccHHHH-----HHHHHHHcCc--cccc
Confidence 99984332 223345567788999999654 3567888999999999999998887762 2222222211 1100
Q ss_pred hhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCCCCC
Q 011041 344 YWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSEFFT 405 (495)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp~f~ 405 (495)
. ..+...-.|.++-.+...+|-+.-..||.-...+.-+.|.
T Consensus 1456 ----------t-----------f~sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isls~d~~a 1496 (2724)
T KOG1826|consen 1456 ----------T-----------FFSIEKLKPGDANVEALHRLLWKYMERPGQYISLSRDHFA 1496 (2724)
T ss_pred ----------c-----------cccccccCCCcccHHHHHHHHHHhhhcchhhhhccccccc
Confidence 0 0011112234444455556666667788877777766654
No 469
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.89 E-value=0.00019 Score=66.86 Aligned_cols=129 Identities=20% Similarity=0.277 Sum_probs=87.4
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCC--------------CChHHHHHHHHHHHHHHhCC------CCCeeeee
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDN--------------LEPESVRFMAREILILRRLD------HPNVVKLE 183 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~--------------~~~~~~~~~~~Ei~il~~l~------HpnIv~l~ 183 (495)
..||+|+.=.||.- . .....+||++.... ..........+|+.....+. +.+|.+++
T Consensus 7 ~~i~~G~~R~cy~H--P-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQH--P-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEEC--C-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 46999999999854 3 34456899987665 11123455667777776665 88999999
Q ss_pred ceeeccCCceeEEEEeeccCC------hhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC--
Q 011041 184 GLVTSRMSCSLYLVFKYMEHD------LAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE-- 255 (495)
Q Consensus 184 ~~~~~~~~~~~~lv~e~~~~~------l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~-- 255 (495)
|+.+. +...-+|+|.+... .+..+... ..+++ .. ...+-.-.+||-+++|+.+||+|.||++...
T Consensus 84 G~veT--~~G~Glv~e~I~d~dG~~s~TL~~~l~~-~~~~~-~~---~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~ 156 (199)
T PF10707_consen 84 GFVET--NLGLGLVVELIRDADGNISPTLEDYLKE-GGLTE-EL---RQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDS 156 (199)
T ss_pred EEEec--CCceEEEEEEEECCCCCcCccHHHHHHc-CCccH-HH---HHHHHHHHHHHHHcCCeecCCCcccEEEEecCC
Confidence 99988 55678888887531 22223322 23555 33 3334445578889999999999999999643
Q ss_pred C--cEEEee
Q 011041 256 G--ILTIAD 262 (495)
Q Consensus 256 ~--~vkL~D 262 (495)
+ .+.|+|
T Consensus 157 ~~~~lvlID 165 (199)
T PF10707_consen 157 GEFRLVLID 165 (199)
T ss_pred CceEEEEEe
Confidence 2 477776
No 470
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.88 E-value=4.5e-05 Score=70.56 Aligned_cols=100 Identities=24% Similarity=0.259 Sum_probs=78.7
Q ss_pred HHHHHHHHhCCC-CCeeeeeceeeccCCceeEEEEeeccCC-hhhh--hhCCCCCCCHHHHHHHHHHHHHHHHHhhh---
Q 011041 165 AREILILRRLDH-PNVVKLEGLVTSRMSCSLYLVFKYMEHD-LAGL--AASPTIKFTQAQVKCYMHQLLSGLEHCHN--- 237 (495)
Q Consensus 165 ~~Ei~il~~l~H-pnIv~l~~~~~~~~~~~~~lv~e~~~~~-l~~~--~~~~~~~l~e~~~~~i~~qil~~L~~LH~--- 237 (495)
..|.-+|+.+.+ +++++++|++- -++|.||.+.+ +... ....-..-++.....++.++++.+++|+.
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG------~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~ 80 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG------RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPL 80 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC------CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 358888999975 69999999773 36788999864 2211 11112245889999999999999999997
Q ss_pred CCceeccCCCCCeeeCCCCcEEEeecccccccC
Q 011041 238 QHVLHRDIKGSNLLIDNEGILTIADFGLASFFD 270 (495)
Q Consensus 238 ~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~ 270 (495)
..+.-.|++++|+-|+++|++|++|...+...+
T Consensus 81 ~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 81 GFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVED 113 (188)
T ss_pred CcEEEeecchHHeEEeCCCcEEEEechhcchhH
Confidence 458889999999999999999999999886553
No 471
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.88 E-value=0.00016 Score=69.14 Aligned_cols=73 Identities=14% Similarity=0.170 Sum_probs=46.2
Q ss_pred eeeecccCceEEEEEEECC-CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCC-eeeeeceeeccCCceeEEEEee
Q 011041 123 LDKIGQGTYSNVYKARDTL-TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPN-VVKLEGLVTSRMSCSLYLVFKY 200 (495)
Q Consensus 123 ~~~LG~G~~g~Vy~a~~~~-~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~~~~~~lv~e~ 200 (495)
++.|..|-...||++.... .+..|++|+...... ......+|+.+++.+...+ .+++++... . .++|||
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~---~~~d~~~E~~~~~~l~~~gl~P~v~~~~~---~---~~l~e~ 73 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE---LIIDRERELRIHKLLSKHGLAPKLYATFQ---N---GLIYEF 73 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc---ceecHHHHHHHHHHHHhCCCCCeEEEEeC---C---cEEEEe
Confidence 4678889899999986443 356788997653221 1123347899999885333 445544332 1 379999
Q ss_pred ccCC
Q 011041 201 MEHD 204 (495)
Q Consensus 201 ~~~~ 204 (495)
++|.
T Consensus 74 i~G~ 77 (235)
T cd05157 74 IPGR 77 (235)
T ss_pred eCCC
Confidence 9874
No 472
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.80 E-value=9.9e-05 Score=71.73 Aligned_cols=132 Identities=20% Similarity=0.220 Sum_probs=75.3
Q ss_pred ecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCe-eeeeceeeccCCceeEEEEeeccCC
Q 011041 126 IGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNV-VKLEGLVTSRMSCSLYLVFKYMEHD 204 (495)
Q Consensus 126 LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~~~~~~~~~~~~~lv~e~~~~~ 204 (495)
+..|-.+.+|+.. .++..+++|......... . -...+|..+++.+...++ ++++.... -++||||++|.
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~-~-~~r~~E~~~l~~l~~~g~~P~~i~~~~------~~~v~e~i~G~ 73 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKAL-G-VDRQREYQILQALSALGLAPKPILVNE------HWLLVEWLEGE 73 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCcccccc-c-CcHHHHHHHHHHHHhcCCCCceEEEeC------CEEEEEeccCc
Confidence 5668888999886 456678888754321111 0 124679999998854333 34443321 26899999874
Q ss_pred hhhh------------------hhC---CCCCCCH-HHHHHHHHHH---------HHHHHHhhh--------CCceeccC
Q 011041 205 LAGL------------------AAS---PTIKFTQ-AQVKCYMHQL---------LSGLEHCHN--------QHVLHRDI 245 (495)
Q Consensus 205 l~~~------------------~~~---~~~~l~e-~~~~~i~~qi---------l~~L~~LH~--------~givHrDl 245 (495)
.+.. +.. ....++. ..+..+..++ ...+..+-. ..++|+|+
T Consensus 74 ~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl 153 (256)
T TIGR02721 74 VITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDV 153 (256)
T ss_pred ccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCC
Confidence 3211 000 0111121 1222222222 111222211 25899999
Q ss_pred CCCCeeeCCCCcEEEeecccccc
Q 011041 246 KGSNLLIDNEGILTIADFGLASF 268 (495)
Q Consensus 246 Kp~NILl~~~~~vkL~DFG~a~~ 268 (495)
.|.||++++++ +.|+||..+..
T Consensus 154 ~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 154 HAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred CcCcEEEeCCC-CEEEeccccCc
Confidence 99999999877 78999998854
No 473
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.70 E-value=0.00083 Score=69.23 Aligned_cols=77 Identities=19% Similarity=0.119 Sum_probs=53.4
Q ss_pred eeeecccCceEEEEEEECCCCeEEEeEEEecC-----CCChHHHHHHHHHHHHHHhCC---CCCeeeeeceeeccCCcee
Q 011041 123 LDKIGQGTYSNVYKARDTLTGQIVALKKVRFD-----NLEPESVRFMAREILILRRLD---HPNVVKLEGLVTSRMSCSL 194 (495)
Q Consensus 123 ~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~-----~~~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~~~~~~ 194 (495)
.+.||.|.+..||++.+...++.|.||.-... ...+-..++...|...|+.+. -.++++++.+.. ...
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~----~~~ 106 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE----ELA 106 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC----CCC
Confidence 46799999999999997654468999985311 001223456777888888862 346777876643 346
Q ss_pred EEEEeeccC
Q 011041 195 YLVFKYMEH 203 (495)
Q Consensus 195 ~lv~e~~~~ 203 (495)
++||||+++
T Consensus 107 ~lVME~L~~ 115 (401)
T PRK09550 107 VTVMEDLSD 115 (401)
T ss_pred EEEEecCCC
Confidence 899999875
No 474
>PRK10593 hypothetical protein; Provisional
Probab=97.63 E-value=0.00075 Score=67.18 Aligned_cols=77 Identities=14% Similarity=0.172 Sum_probs=52.9
Q ss_pred eeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCC---CCeeeeeceeecc-CCceeEEE
Q 011041 122 KLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDH---PNVVKLEGLVTSR-MSCSLYLV 197 (495)
Q Consensus 122 ~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H---pnIv~l~~~~~~~-~~~~~~lv 197 (495)
-.+.||.|..+.||..... ++ .+.+|..+ .. .....+.+|+..|+.|.- -.++++++++... ..+..+||
T Consensus 18 ~~~~i~~G~~~~vy~~~~~-~~-~~~~k~~~-~~---~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LV 91 (297)
T PRK10593 18 RVECISEQPYAALWALYDS-QG-NPMPLMAR-SF---STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLL 91 (297)
T ss_pred eeeecCCccceeEEEEEcC-CC-CEEEEEec-cc---ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEE
Confidence 3467999999999998532 23 46677743 21 122578899999998843 3577888766542 13558999
Q ss_pred EeeccCC
Q 011041 198 FKYMEHD 204 (495)
Q Consensus 198 ~e~~~~~ 204 (495)
||++++.
T Consensus 92 mE~i~G~ 98 (297)
T PRK10593 92 LERLRGV 98 (297)
T ss_pred EeccCCE
Confidence 9998864
No 475
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.61 E-value=0.00034 Score=69.45 Aligned_cols=139 Identities=15% Similarity=0.128 Sum_probs=81.1
Q ss_pred eeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCC--eeeeeceee----ccCCceeE
Q 011041 122 KLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPN--VVKLEGLVT----SRMSCSLY 195 (495)
Q Consensus 122 ~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~~~----~~~~~~~~ 195 (495)
-++.|..|....+|+... .+..+++|+... . ....+..|+.++..|.+.+ +++++.... ....+..+
T Consensus 18 ~i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~--~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~ 90 (296)
T cd05153 18 SFEGISAGIENTNYFVTT--DSGRYVLTLFEK--V---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPA 90 (296)
T ss_pred heecccCccccceEEEEe--CCCcEEEEEcCC--C---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceE
Confidence 356788888889999853 344688898753 1 1245667888888884332 444433211 01134578
Q ss_pred EEEeeccCChhhh---------------hhC--CCCC-------C-C--HHHHH--------HHHHHHHHHHHHhhh---
Q 011041 196 LVFKYMEHDLAGL---------------AAS--PTIK-------F-T--QAQVK--------CYMHQLLSGLEHCHN--- 237 (495)
Q Consensus 196 lv~e~~~~~l~~~---------------~~~--~~~~-------l-~--e~~~~--------~i~~qil~~L~~LH~--- 237 (495)
++++|++|..... +.. .... . . ..... .....+...+.++..
T Consensus 91 ~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 170 (296)
T cd05153 91 ALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDP 170 (296)
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhh
Confidence 9999998743210 000 0000 0 0 00000 011112233444442
Q ss_pred ----CCceeccCCCCCeeeCCCCcEEEeeccccc
Q 011041 238 ----QHVLHRDIKGSNLLIDNEGILTIADFGLAS 267 (495)
Q Consensus 238 ----~givHrDlKp~NILl~~~~~vkL~DFG~a~ 267 (495)
.+++|+|+.|.|||+++++.+.|+||+.+.
T Consensus 171 ~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 171 SDLPRGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred hcCCCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 479999999999999998778999999874
No 476
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.59 E-value=0.00079 Score=67.27 Aligned_cols=140 Identities=20% Similarity=0.253 Sum_probs=98.3
Q ss_pred eeecccCceEEEEEEECCCCeEEEeEEEecCC-------------------CC---hH--HHHHHHHHHHHHHhCCCCCe
Q 011041 124 DKIGQGTYSNVYKARDTLTGQIVALKKVRFDN-------------------LE---PE--SVRFMAREILILRRLDHPNV 179 (495)
Q Consensus 124 ~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~-------------------~~---~~--~~~~~~~Ei~il~~l~HpnI 179 (495)
..|..|--+.||.|. ..+|..+|||+.+..- .. +. ..-....|++-|.+|..-.|
T Consensus 150 GCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGI 228 (520)
T KOG2270|consen 150 GCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGI 228 (520)
T ss_pred cccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 457788889999998 4578889999874210 00 11 11224468888888876665
Q ss_pred eeeeceeeccCCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhh-hCCceeccCCCCCeeeCCCCcE
Q 011041 180 VKLEGLVTSRMSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCH-NQHVLHRDIKGSNLLIDNEGIL 258 (495)
Q Consensus 180 v~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH-~~givHrDlKp~NILl~~~~~v 258 (495)
+-..-+.. ..-.|||+|++.+-...-......++...+..+-.|++.-+.-|- .+++||.||.-=|+|+. +|.+
T Consensus 229 P~PePIlL----k~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyh-dG~l 303 (520)
T KOG2270|consen 229 PCPEPILL----KNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYH-DGKL 303 (520)
T ss_pred CCCCceee----ecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEE-CCEE
Confidence 43322222 235899999986533333333456888889999999998888874 67999999999999885 4789
Q ss_pred EEeeccccccc
Q 011041 259 TIADFGLASFF 269 (495)
Q Consensus 259 kL~DFG~a~~~ 269 (495)
.|+|.+-+...
T Consensus 304 yiIDVSQSVE~ 314 (520)
T KOG2270|consen 304 YIIDVSQSVEH 314 (520)
T ss_pred EEEEccccccC
Confidence 99999977543
No 477
>PRK05231 homoserine kinase; Provisional
Probab=97.56 E-value=0.001 Score=66.74 Aligned_cols=30 Identities=27% Similarity=0.476 Sum_probs=26.2
Q ss_pred CCceeccCCCCCeeeCCCCcEEEeeccccc
Q 011041 238 QHVLHRDIKGSNLLIDNEGILTIADFGLAS 267 (495)
Q Consensus 238 ~givHrDlKp~NILl~~~~~vkL~DFG~a~ 267 (495)
.++||+|+.|.|||++.+...-|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 489999999999999976666899999874
No 478
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.55 E-value=0.00056 Score=68.09 Aligned_cols=73 Identities=23% Similarity=0.244 Sum_probs=45.7
Q ss_pred eeeecccCceEEEEEEECC------CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCC-eeeeeceeeccCCceeE
Q 011041 123 LDKIGQGTYSNVYKARDTL------TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPN-VVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 123 ~~~LG~G~~g~Vy~a~~~~------~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~~~~~~~~~~~~~ 195 (495)
++.|..|-...||++.... +++.|++|+..... .......+|+.++..+...+ .+++++++.. .
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~------~ 73 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV---ELLIDRERELVVFARLSERNLGPKLYGIFPN------G 73 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC---cceechHHHHHHHHHHHhCCCCCceEEEeCC------C
Confidence 3567778788999887433 25788999865432 12234567888888885333 3455554432 3
Q ss_pred EEEeeccCC
Q 011041 196 LVFKYMEHD 204 (495)
Q Consensus 196 lv~e~~~~~ 204 (495)
+|+||++|.
T Consensus 74 ~v~e~i~G~ 82 (302)
T cd05156 74 RIEEFIPSR 82 (302)
T ss_pred chhheeCCC
Confidence 578888764
No 479
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.53 E-value=0.00051 Score=68.66 Aligned_cols=142 Identities=17% Similarity=0.148 Sum_probs=81.3
Q ss_pred eeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCC--eeeeeceee----ccCCce
Q 011041 120 FEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPN--VVKLEGLVT----SRMSCS 193 (495)
Q Consensus 120 y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~~~----~~~~~~ 193 (495)
...++.++.|....||++.. .+| .+++|+..... . ...+..|+.++..|...+ +++++.... ....+.
T Consensus 24 ~~~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~-~---~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~ 97 (307)
T TIGR00938 24 LLSLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV-K---AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGK 97 (307)
T ss_pred ceeccccCCccccceEEEEe-CCC-cEEEEEecCCC-C---HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCe
Confidence 44567788888889999863 344 57789875421 1 233456777777774222 344433211 111356
Q ss_pred eEEEEeeccCChhh---------------hhhCCCCCC--------CHHH-----HH----------HHHHHHHHHHHHh
Q 011041 194 LYLVFKYMEHDLAG---------------LAASPTIKF--------TQAQ-----VK----------CYMHQLLSGLEHC 235 (495)
Q Consensus 194 ~~lv~e~~~~~l~~---------------~~~~~~~~l--------~e~~-----~~----------~i~~qil~~L~~L 235 (495)
.+++|+|++|.... .+......+ .... .. .....+...++++
T Consensus 98 ~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l 177 (307)
T TIGR00938 98 PACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYL 177 (307)
T ss_pred EEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHH
Confidence 78999999873210 000000000 0000 00 0111233345555
Q ss_pred h-------hCCceeccCCCCCeeeCCCCcEEEeeccccc
Q 011041 236 H-------NQHVLHRDIKGSNLLIDNEGILTIADFGLAS 267 (495)
Q Consensus 236 H-------~~givHrDlKp~NILl~~~~~vkL~DFG~a~ 267 (495)
. ..+++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 178 ~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 178 DKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred HhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 3 3689999999999999998877899999874
No 480
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.53 E-value=0.0014 Score=65.39 Aligned_cols=148 Identities=21% Similarity=0.247 Sum_probs=83.5
Q ss_pred eeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCC--eeeeeceeeccCCceeEEEE
Q 011041 121 EKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPN--VVKLEGLVTSRMSCSLYLVF 198 (495)
Q Consensus 121 ~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~~~~~~~~~~~~~lv~ 198 (495)
.+++.+-.|.--.+|...+. ++.+++. ...............+|..+++.+.--- +...++++.+..-...|.||
T Consensus 28 ~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~ 104 (321)
T COG3173 28 LIVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVM 104 (321)
T ss_pred ceeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEE
Confidence 34445544444455555433 7778888 3222234455677888999999884322 33344555443224679999
Q ss_pred eeccCChhhhhhCC------------------------------C--CCCCHHHHHHHHHHH--------------HHHH
Q 011041 199 KYMEHDLAGLAASP------------------------------T--IKFTQAQVKCYMHQL--------------LSGL 232 (495)
Q Consensus 199 e~~~~~l~~~~~~~------------------------------~--~~l~e~~~~~i~~qi--------------l~~L 232 (495)
+|++|......... . ..+...++..+..+. ..-.
T Consensus 105 ~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~ 184 (321)
T COG3173 105 EWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLI 184 (321)
T ss_pred EEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHH
Confidence 99988311100000 0 001111111111111 1223
Q ss_pred HHhhh--------CCceeccCCCCCeeeCCCCcEEEeecccccccCC
Q 011041 233 EHCHN--------QHVLHRDIKGSNLLIDNEGILTIADFGLASFFDP 271 (495)
Q Consensus 233 ~~LH~--------~givHrDlKp~NILl~~~~~vkL~DFG~a~~~~~ 271 (495)
.+|+. ..++|+|+.+.||+|++++.+-|+||+++..-++
T Consensus 185 ~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP 231 (321)
T COG3173 185 KWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDP 231 (321)
T ss_pred HHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence 33332 2599999999999999998899999999976544
No 481
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.51 E-value=9.9e-05 Score=72.38 Aligned_cols=139 Identities=16% Similarity=0.177 Sum_probs=94.5
Q ss_pred CCeeeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHH--------------------HHHHHHHHHHHHhCCC-
Q 011041 118 DTFEKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPES--------------------VRFMAREILILRRLDH- 176 (495)
Q Consensus 118 ~~y~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~--------------------~~~~~~Ei~il~~l~H- 176 (495)
.-|.+++.||-|--+.||.+-+. .|.+.++|.-+....+... .-...+|...|+.|..
T Consensus 92 ~v~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~ 170 (465)
T KOG2268|consen 92 SVESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYER 170 (465)
T ss_pred hhhhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHc
Confidence 35677899999999999999754 5888999965432211110 1123468888888742
Q ss_pred -CCeeeeeceeeccCCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCceeccCCCCCeeeCCC
Q 011041 177 -PNVVKLEGLVTSRMSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLHRDIKGSNLLIDNE 255 (495)
Q Consensus 177 -pnIv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givHrDlKp~NILl~~~ 255 (495)
--+++.+++ +..++|||++.+--+..... ...+..+...+..-+--|-.+|+||+|..-=||+|+++
T Consensus 171 gfpVPkpiD~------~RH~Vvmelv~g~Pl~~v~~------v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd 238 (465)
T KOG2268|consen 171 GFPVPKPIDH------NRHCVVMELVDGYPLRQVRH------VEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDD 238 (465)
T ss_pred CCCCCCcccc------cceeeHHHhhcccceeeeee------cCChHHHHHHHHHHHHHHHHcCceecccchheeEEecC
Confidence 234444443 34688999988743322211 12234455666666777889999999999999999999
Q ss_pred CcEEEeeccccccc
Q 011041 256 GILTIADFGLASFF 269 (495)
Q Consensus 256 ~~vkL~DFG~a~~~ 269 (495)
+.++++||--....
T Consensus 239 ~~i~vIDFPQmvS~ 252 (465)
T KOG2268|consen 239 DKIVVIDFPQMVST 252 (465)
T ss_pred CCEEEeechHhhcc
Confidence 99999999866443
No 482
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.36 E-value=0.00038 Score=72.13 Aligned_cols=173 Identities=23% Similarity=0.289 Sum_probs=112.0
Q ss_pred HHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhCCcee
Q 011041 163 FMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQHVLH 242 (495)
Q Consensus 163 ~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~givH 242 (495)
.+.-...+++.+.|+|...++++..... ....+|||+++.++........ +-.. +++ .+|+.|
T Consensus 28 ~ilgr~~~lktl~~~~l~~yl~~~r~~~-~r~IVV~e~~~~Sled~~~~~~--l~~~-------s~~-------~~~~~~ 90 (725)
T KOG1093|consen 28 QILGRFQYLKSLQHDNLCQYLDFSRGKH-ERVIVVMEHYTMSLEDILKTGN--LKDE-------SLL-------AHGVLH 90 (725)
T ss_pred HHhhhhHHHHhhcCccceeeEeeecCcc-ceEEEEehhhccchHHHHHhcc--cchh-------hhc-------ccccce
Confidence 3445678899999999999998877653 4589999999987776554432 1100 111 222222
Q ss_pred ccCCCCCeeeCCCCcEEEeecccccccCCCCCCCCccccccCCCCCcccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 011041 243 RDIKGSNLLIDNEGILTIADFGLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMP 322 (495)
Q Consensus 243 rDlKp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DvwSlGvil~elltG~~pf~ 322 (495)
- | .++.+| -++. . | |- ..++++||||+|.|+.++.-|.-.|.
T Consensus 91 ~-----~-------~~~~td-~~~t------------~-----~--~~------~~~pKsdVwsl~~i~~el~L~~~l~~ 132 (725)
T KOG1093|consen 91 L-----N-------IIYITD-HFLT------------K-----Y--PS------PIGPKSDVWSLGFIILELYLGISLEA 132 (725)
T ss_pred e-----h-------hhhccc-cccc------------c-----C--CC------CCCcchhhhhHHHHHHHHHHhhHHHH
Confidence 2 2 233333 0000 0 1 11 12359999999999999999999888
Q ss_pred CCChHHHHHHHHHhcCCCChhhhhhCCCCCCccCCCCcccccccccccCCCCCCcHHHHHHhccCCCCCccCHHHHHhCC
Q 011041 323 GRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIETLLAIDPAERQTATAALRSE 402 (495)
Q Consensus 323 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Li~~~L~~dP~~R~ta~elL~hp 402 (495)
..+..+.+..|.+....+....-- .+-.......+.-..+++.+|+...|..||...++++++
T Consensus 133 ~~~~s~~l~~i~k~~~~d~~~~~~-----------------a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~ 195 (725)
T KOG1093|consen 133 ELTESEYLEILLKYYTDDQELLST-----------------AMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRC 195 (725)
T ss_pred HHHHHHHHHHHHHhccCchhHHHH-----------------HHHHHHHHhhhHhHHHHhccCCccccccccchhHHhcCc
Confidence 888888888887765443321100 000112223456678899999999999999999999999
Q ss_pred CCCCC
Q 011041 403 FFTTK 407 (495)
Q Consensus 403 ~f~~~ 407 (495)
-|+..
T Consensus 196 i~~ev 200 (725)
T KOG1093|consen 196 SFTEV 200 (725)
T ss_pred cHHHH
Confidence 88753
No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.24 E-value=0.0023 Score=63.00 Aligned_cols=31 Identities=23% Similarity=0.359 Sum_probs=26.0
Q ss_pred CceeccCCCCCeeeCCCCc-EEEeeccccccc
Q 011041 239 HVLHRDIKGSNLLIDNEGI-LTIADFGLASFF 269 (495)
Q Consensus 239 givHrDlKp~NILl~~~~~-vkL~DFG~a~~~ 269 (495)
.++|+|++|.|||+++++. +-|+||+.+..-
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG 217 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVG 217 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence 4899999999999997565 469999988643
No 484
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.14 E-value=0.0043 Score=62.72 Aligned_cols=150 Identities=16% Similarity=0.239 Sum_probs=81.5
Q ss_pred ccCCCCCCCCCeeeeeeecccCceEEEEEEECCC---CeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCe-eeeec
Q 011041 109 ISGWTPRRADTFEKLDKIGQGTYSNVYKARDTLT---GQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNV-VKLEG 184 (495)
Q Consensus 109 ~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~~ 184 (495)
+++|.....++..+ +.|..|=...+|++..... +..|.+|+..... +..-.-.+|+.+++.+..-++ +++++
T Consensus 6 ~~~w~~~~~~~i~i-~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t---~~~IdR~~E~~il~~l~~~gl~P~~l~ 81 (330)
T PLN02421 6 FKGWSDLDDSDFSV-ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNT---DYVIDRERELQAIKYLSAAGFGAKLLG 81 (330)
T ss_pred CCccccCCcCceEE-EEeCCcccceEEEEEecCCCCCCceEEEEEecCCc---CeEechHHHHHHHHHHHhcCCCCceeE
Confidence 34454443344444 4455587788998864432 2378888765322 112223578899998865444 45655
Q ss_pred eeeccCCceeEEEEeeccCChhhh------------------hhCCC----CCCC-HHHHHHHHHHH-------------
Q 011041 185 LVTSRMSCSLYLVFKYMEHDLAGL------------------AASPT----IKFT-QAQVKCYMHQL------------- 228 (495)
Q Consensus 185 ~~~~~~~~~~~lv~e~~~~~l~~~------------------~~~~~----~~l~-e~~~~~i~~qi------------- 228 (495)
++.. + +|.+|+++..+.. +.... ..++ ...+..++.++
T Consensus 82 ~~~~---G---~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~ 155 (330)
T PLN02421 82 VFGN---G---MIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKK 155 (330)
T ss_pred EeCC---c---EeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhh
Confidence 5532 1 4778876542210 00100 0011 12233332222
Q ss_pred ---------HHHHH----HhhhC----CceeccCCCCCeeeCC-CCcEEEeecccccc
Q 011041 229 ---------LSGLE----HCHNQ----HVLHRDIKGSNLLIDN-EGILTIADFGLASF 268 (495)
Q Consensus 229 ---------l~~L~----~LH~~----givHrDlKp~NILl~~-~~~vkL~DFG~a~~ 268 (495)
..-+. ++... -++|+||.+.|||+++ ++.++++||..|..
T Consensus 156 ~~~~~~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 156 YETISFEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred hcccCHHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 11111 12122 2799999999999975 57899999998853
No 485
>PLN02236 choline kinase
Probab=97.07 E-value=0.0062 Score=61.97 Aligned_cols=151 Identities=16% Similarity=0.181 Sum_probs=83.4
Q ss_pred ccCCCCCCCCCeeeeeeecccCceEEEEEEECC----CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCe-eeee
Q 011041 109 ISGWTPRRADTFEKLDKIGQGTYSNVYKARDTL----TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNV-VKLE 183 (495)
Q Consensus 109 ~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~ 183 (495)
...|.........-+..|-.|-...+|++.... +++.|.+|+..... ...+ ...+|+.+++.+..-++ ++++
T Consensus 27 ~~~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t--~~~i-dR~~E~~~~~~l~~~gl~P~~~ 103 (344)
T PLN02236 27 ASKWGDVVDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV--ELFF-DRDDEIRTFECMSRHGQGPRLL 103 (344)
T ss_pred cchhcCCCCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC--Ceee-chHHHHHHHHHHHHcCCCCceE
Confidence 344543212233344566668888999986432 34678899765432 1112 23578999998854444 4555
Q ss_pred ceeeccCCceeEEEEeeccCChhhh------------------hhC---CCCC-C-CHHHHHHHHHHHH-----------
Q 011041 184 GLVTSRMSCSLYLVFKYMEHDLAGL------------------AAS---PTIK-F-TQAQVKCYMHQLL----------- 229 (495)
Q Consensus 184 ~~~~~~~~~~~~lv~e~~~~~l~~~------------------~~~---~~~~-l-~e~~~~~i~~qil----------- 229 (495)
+.+.. + .|.+|+++..+.. +.. .... + ....+..++.++.
T Consensus 104 ~~~~~---g---~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~ 177 (344)
T PLN02236 104 GRFPN---G---RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEF 177 (344)
T ss_pred EEECC---c---eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhc
Confidence 55532 1 4788887632211 000 0000 1 1222333332221
Q ss_pred ------HHHHH----h----hhCCceeccCCCCCeeeCC-CCcEEEeecccccc
Q 011041 230 ------SGLEH----C----HNQHVLHRDIKGSNLLIDN-EGILTIADFGLASF 268 (495)
Q Consensus 230 ------~~L~~----L----H~~givHrDlKp~NILl~~-~~~vkL~DFG~a~~ 268 (495)
..+.. + +...++|+|+++.|||+++ ++.+.|+||..+..
T Consensus 178 ~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 178 RLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred CHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 11111 1 1236899999999999986 47899999998854
No 486
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.99 E-value=0.0094 Score=61.42 Aligned_cols=76 Identities=17% Similarity=0.172 Sum_probs=50.8
Q ss_pred eeeeecccCceEEEEEEECCCCeEEEeEEEecCCC-----ChHHHHHHHHHHHHHHhCC---CCCeeeeeceeeccCCce
Q 011041 122 KLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNL-----EPESVRFMAREILILRRLD---HPNVVKLEGLVTSRMSCS 193 (495)
Q Consensus 122 ~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~~~~~ 193 (495)
..+.||.|....||+..+. +..|+||.-..... .+........|+..|+.+. ..++++++.+..+ .
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded----~ 109 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT----M 109 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC----C
Confidence 3578999999999998763 45688997542111 0113444555677777663 3478888877754 3
Q ss_pred eEEEEeeccC
Q 011041 194 LYLVFKYMEH 203 (495)
Q Consensus 194 ~~lv~e~~~~ 203 (495)
.+++|||+++
T Consensus 110 ~vlvME~L~~ 119 (418)
T PLN02756 110 ALIGMRYLEP 119 (418)
T ss_pred CEEEEeecCC
Confidence 5788999966
No 487
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.92 E-value=0.0077 Score=61.00 Aligned_cols=75 Identities=19% Similarity=0.176 Sum_probs=48.1
Q ss_pred eecccCceEEEEEEECCCCeEEEeEEEe----c-CCCChHHHHHHHHHHHHHHhCC--CC-CeeeeeceeeccCCceeEE
Q 011041 125 KIGQGTYSNVYKARDTLTGQIVALKKVR----F-DNLEPESVRFMAREILILRRLD--HP-NVVKLEGLVTSRMSCSLYL 196 (495)
Q Consensus 125 ~LG~G~~g~Vy~a~~~~~g~~vAiK~i~----~-~~~~~~~~~~~~~Ei~il~~l~--Hp-nIv~l~~~~~~~~~~~~~l 196 (495)
.||.|....||++.+...++.|+||.-. . ....+-...+..-|...|+... -| .+++++.+-. ....+
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~----e~~~~ 77 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDT----EMAVT 77 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEcc----cccee
Confidence 4799999999999976444689999742 1 1111233445556788887763 23 5666655432 34579
Q ss_pred EEeeccC
Q 011041 197 VFKYMEH 203 (495)
Q Consensus 197 v~e~~~~ 203 (495)
|||+++.
T Consensus 78 vMEdL~~ 84 (370)
T TIGR01767 78 VMEDLSH 84 (370)
T ss_pred hHhhCcc
Confidence 9999853
No 488
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.88 E-value=0.0073 Score=60.23 Aligned_cols=29 Identities=21% Similarity=0.408 Sum_probs=25.7
Q ss_pred CCceeccCCCCCeeeCCCCcEEEeeccccc
Q 011041 238 QHVLHRDIKGSNLLIDNEGILTIADFGLAS 267 (495)
Q Consensus 238 ~givHrDlKp~NILl~~~~~vkL~DFG~a~ 267 (495)
.+++|+|+.+.|||++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 57999999999999988 678999999763
No 489
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.62 E-value=0.012 Score=60.32 Aligned_cols=76 Identities=18% Similarity=0.162 Sum_probs=50.5
Q ss_pred eeeecccCceEEEEEEECCCCeEEEeEEEe----cCCCChHHHHHHHHHHHHHHhCC--CC-CeeeeeceeeccCCceeE
Q 011041 123 LDKIGQGTYSNVYKARDTLTGQIVALKKVR----FDNLEPESVRFMAREILILRRLD--HP-NVVKLEGLVTSRMSCSLY 195 (495)
Q Consensus 123 ~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~----~~~~~~~~~~~~~~Ei~il~~l~--Hp-nIv~l~~~~~~~~~~~~~ 195 (495)
++.||.|.-.-||++.+...+..|+||.-. ...-.+-...+..-|..+|+.+. -| .+++++.+-. ....
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~----e~~~ 109 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDS----VMNC 109 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEECc----HHhh
Confidence 678999999999999875445678998642 11112334556667888888763 23 5666755433 3467
Q ss_pred EEEeecc
Q 011041 196 LVFKYME 202 (495)
Q Consensus 196 lv~e~~~ 202 (495)
+|||+++
T Consensus 110 ~vMEdL~ 116 (409)
T PRK12396 110 CVMEDLS 116 (409)
T ss_pred HHHHhCc
Confidence 8999885
No 490
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.46 E-value=0.013 Score=55.06 Aligned_cols=31 Identities=29% Similarity=0.595 Sum_probs=21.8
Q ss_pred CCceeccCCCCCeee-CCCCcEEEeecccccc
Q 011041 238 QHVLHRDIKGSNLLI-DNEGILTIADFGLASF 268 (495)
Q Consensus 238 ~givHrDlKp~NILl-~~~~~vkL~DFG~a~~ 268 (495)
.-++|+||.+.|||+ +.++.++|+||..|..
T Consensus 143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred ceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 358999999999999 8889999999998753
No 491
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.43 E-value=0.016 Score=57.97 Aligned_cols=30 Identities=27% Similarity=0.291 Sum_probs=27.9
Q ss_pred CceeccCCCCCeeeCCCCcEEEeecccccc
Q 011041 239 HVLHRDIKGSNLLIDNEGILTIADFGLASF 268 (495)
Q Consensus 239 givHrDlKp~NILl~~~~~vkL~DFG~a~~ 268 (495)
+++|+|+.+.|||+++++.+-|+||..+..
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 799999999999999999999999998864
No 492
>PTZ00384 choline kinase; Provisional
Probab=96.38 E-value=0.033 Score=57.39 Aligned_cols=90 Identities=18% Similarity=0.199 Sum_probs=49.2
Q ss_pred cccCCCCCCCCCeeeeeeecccCceEEEEEEECCC-CeEEEeEEE-ecC-CCChHHHHHHHHHHHHHHhCCCCCe-eeee
Q 011041 108 AISGWTPRRADTFEKLDKIGQGTYSNVYKARDTLT-GQIVALKKV-RFD-NLEPESVRFMAREILILRRLDHPNV-VKLE 183 (495)
Q Consensus 108 ~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~-g~~vAiK~i-~~~-~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~ 183 (495)
.+..|.....+... ++.|..|-...+|++..... +..+.+|.+ ... .......-.-.+|+.+++.|...++ .+++
T Consensus 41 ~~p~w~~~~~~~i~-i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~ 119 (383)
T PTZ00384 41 HVPFWNNVNPEFIE-IKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKII 119 (383)
T ss_pred HCCccccCCcccEE-EEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEE
Confidence 34456544334444 44666688899999964432 223323321 110 1111111223568999999965444 5666
Q ss_pred ceeeccCCceeEEEEeeccCC
Q 011041 184 GLVTSRMSCSLYLVFKYMEHD 204 (495)
Q Consensus 184 ~~~~~~~~~~~~lv~e~~~~~ 204 (495)
+.+.. +++.||++|.
T Consensus 120 ~~f~~------g~l~efIeGr 134 (383)
T PTZ00384 120 GRFGD------FTIQEWVEGN 134 (383)
T ss_pred EecCC------EEEEEEeccc
Confidence 66542 6888999874
No 493
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.29 E-value=0.027 Score=55.63 Aligned_cols=75 Identities=15% Similarity=0.185 Sum_probs=46.5
Q ss_pred eeeeeecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCC---CCCeeeeeceeeccCCceeEEE
Q 011041 121 EKLDKIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLD---HPNVVKLEGLVTSRMSCSLYLV 197 (495)
Q Consensus 121 ~~~~~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~---HpnIv~l~~~~~~~~~~~~~lv 197 (495)
+..+.|+.|....+|+.. .+++.|.||+-.. .....+..|+.-|+.|. --.+++++++.... ..-||+
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~-----~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~--~~~fLl 90 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNSE-----SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYD--DDAFLL 90 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEEG-----GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-S--SCCEEE
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecCh-----hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeec--CCceEE
Confidence 445679999999999986 6778899998762 22346778888888883 44577888877653 345999
Q ss_pred EeeccCC
Q 011041 198 FKYMEHD 204 (495)
Q Consensus 198 ~e~~~~~ 204 (495)
|||++.+
T Consensus 91 le~l~~~ 97 (288)
T PF03881_consen 91 LEFLEMG 97 (288)
T ss_dssp EE-----
T ss_pred EEeecCC
Confidence 9998754
No 494
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.25 E-value=0.014 Score=58.63 Aligned_cols=72 Identities=26% Similarity=0.373 Sum_probs=56.3
Q ss_pred CceeEEEEeeccCChhhhhhCCCCCCCHHHHHHHHHHHHHHHHHhhhC-CceeccCCCCCeeeCCCCcEEEeecccccc
Q 011041 191 SCSLYLVFKYMEHDLAGLAASPTIKFTQAQVKCYMHQLLSGLEHCHNQ-HVLHRDIKGSNLLIDNEGILTIADFGLASF 268 (495)
Q Consensus 191 ~~~~~lv~e~~~~~l~~~~~~~~~~l~e~~~~~i~~qil~~L~~LH~~-givHrDlKp~NILl~~~~~vkL~DFG~a~~ 268 (495)
..+.|++|++.++.+...- .-..+++..|+++-+..++-+..+ ..-|||+...||||+ +|+|.|+||-+++.
T Consensus 298 ~~y~yl~~kdhgt~is~ik-----~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl 370 (488)
T COG5072 298 TLYLYLHFKDHGTPISIIK-----ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL 370 (488)
T ss_pred ceEEEEEEecCCceeeeee-----cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence 5678888988776554221 124567788888888777777644 689999999999999 99999999999984
No 495
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=96.25 E-value=0.084 Score=53.20 Aligned_cols=136 Identities=17% Similarity=0.229 Sum_probs=77.6
Q ss_pred eecccCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCC------eeeeeceeeccCCc--eeEE
Q 011041 125 KIGQGTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPN------VVKLEGLVTSRMSC--SLYL 196 (495)
Q Consensus 125 ~LG~G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn------Iv~l~~~~~~~~~~--~~~l 196 (495)
.|.+ .-..||+.... .|. +++|+.+.. ... ..+.-|+..|+.|.-.+ |..+-|-....-.. +.+-
T Consensus 33 ~l~s-~eN~~f~~~~~-~g~-~iLki~~~~-~~~---~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~ 105 (331)
T COG2334 33 GLNS-EENSNFRVQTE-DGR-YILKIYRPG-WTR---AEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAA 105 (331)
T ss_pred cccc-ccCceEEEEec-CCC-eEEEEecCC-CCH---HHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEE
Confidence 3444 55678988643 343 489988765 333 34556778888773212 33333322222233 7888
Q ss_pred EEeeccCChhhh----------------hhC--CCC---------CCCHH----H---------HHHHHHHHHHHHHHhh
Q 011041 197 VFKYMEHDLAGL----------------AAS--PTI---------KFTQA----Q---------VKCYMHQLLSGLEHCH 236 (495)
Q Consensus 197 v~e~~~~~l~~~----------------~~~--~~~---------~l~e~----~---------~~~i~~qil~~L~~LH 236 (495)
+++|++|..... +.. .+. ...+. . -.....++...++.+.
T Consensus 106 lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~ 185 (331)
T COG2334 106 LFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLL 185 (331)
T ss_pred EEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHH
Confidence 999998754431 000 000 01111 0 0012334444455554
Q ss_pred h--------CC--ceeccCCCCCeeeCCCCc-EEEeeccccc
Q 011041 237 N--------QH--VLHRDIKGSNLLIDNEGI-LTIADFGLAS 267 (495)
Q Consensus 237 ~--------~g--ivHrDlKp~NILl~~~~~-vkL~DFG~a~ 267 (495)
+ .+ |||+|+.|.|||++.+.. +.++|||-+.
T Consensus 186 ~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 186 ARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred hhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 3 34 999999999999999885 8999999763
No 496
>PRK06148 hypothetical protein; Provisional
Probab=96.06 E-value=0.12 Score=60.19 Aligned_cols=31 Identities=32% Similarity=0.611 Sum_probs=26.7
Q ss_pred CCceeccCCCCCeeeCCCC--cEE-Eeecccccc
Q 011041 238 QHVLHRDIKGSNLLIDNEG--ILT-IADFGLASF 268 (495)
Q Consensus 238 ~givHrDlKp~NILl~~~~--~vk-L~DFG~a~~ 268 (495)
.++||+|+.+.|||++.++ .+. |+|||.+..
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 5799999999999999875 565 999998854
No 497
>PTZ00296 choline kinase; Provisional
Probab=96.05 E-value=0.07 Score=56.06 Aligned_cols=86 Identities=10% Similarity=0.167 Sum_probs=52.5
Q ss_pred ccCCCCCCCCCeeeeeeecccCceEEEEEEECC--------CCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCe-
Q 011041 109 ISGWTPRRADTFEKLDKIGQGTYSNVYKARDTL--------TGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNV- 179 (495)
Q Consensus 109 ~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~--------~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnI- 179 (495)
+.+|.....++. -++.|..|-.-.+|++.... .++.|.+++.-... +..-...+|..+++.+...+|
T Consensus 97 vp~W~~~~~~~I-~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~t---e~lIdR~~E~~v~~~ls~~gi~ 172 (442)
T PTZ00296 97 VPEWRRFTEDDV-RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDV---DELYNPISEFEVYKTMSKYRIA 172 (442)
T ss_pred CCccccCCcccE-EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCc---cceeCHHHHHHHHHHHHHCCCC
Confidence 456664444555 66778888888999987542 14678888764322 111234468888888854444
Q ss_pred eeeeceeeccCCceeEEEEeeccCC
Q 011041 180 VKLEGLVTSRMSCSLYLVFKYMEHD 204 (495)
Q Consensus 180 v~l~~~~~~~~~~~~~lv~e~~~~~ 204 (495)
.++++.+.. +.+.+|++|.
T Consensus 173 P~l~~~f~g------g~I~efi~g~ 191 (442)
T PTZ00296 173 PQLLNTFSG------GRIEEWLYGD 191 (442)
T ss_pred CceEEEeCC------CEEEEeeCCc
Confidence 355555432 4567888764
No 498
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.44 E-value=0.37 Score=48.60 Aligned_cols=28 Identities=25% Similarity=0.201 Sum_probs=23.9
Q ss_pred CCceeccCCCCCeeeCCCCcEEEeeccccc
Q 011041 238 QHVLHRDIKGSNLLIDNEGILTIADFGLAS 267 (495)
Q Consensus 238 ~givHrDlKp~NILl~~~~~vkL~DFG~a~ 267 (495)
.++||+|+.+.|||++ + .+.|+||+.+.
T Consensus 196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~ 223 (325)
T PRK11768 196 LLRLHGDCHPGNILWR-D-GPHFVDLDDAR 223 (325)
T ss_pred ccceecCCCchhcccc-C-CcEEEeCCCCC
Confidence 4799999999999995 4 57899999764
No 499
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=95.19 E-value=0.095 Score=49.26 Aligned_cols=116 Identities=18% Similarity=0.217 Sum_probs=70.8
Q ss_pred cCceEEEEEEECCCCeEEEeEEEecCCCChHHHHHHHHHHHHHHhCCCCCeeeeeceeeccCCceeEEEEeeccCChhhh
Q 011041 129 GTYSNVYKARDTLTGQIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFKYMEHDLAGL 208 (495)
Q Consensus 129 G~~g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~lv~e~~~~~l~~~ 208 (495)
|+.++.-.+..+- | ...+|+++.-...-. ...+..+..++.++. .|+++.. + ....+-++.|+|-.--.
T Consensus 73 ~gNsTl~~~kt~i-G-~L~lKKi~slp~~~~-~~~y~nky~v~Armh--GilrL~N---D-n~~~yGvIlE~Cy~~~i-- 141 (308)
T PF07387_consen 73 NGNSTLLIGKTKI-G-PLFLKKIRSLPCCIN-DALYFNKYRVFARMH--GILRLKN---D-NNYKYGVILERCYKIKI-- 141 (308)
T ss_pred CCceEEEEecccc-c-hhhhhhccCCCcccc-hhhhhhhhhHHHHhh--heeEeec---C-CCceeEEEEeeccCccc--
Confidence 4444544443222 3 345666654333212 234577888888875 5787752 2 24456678887753100
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHhh--hCCceeccCCCCCeeeCCCCcEEEeecccc
Q 011041 209 AASPTIKFTQAQVKCYMHQLLSGLEHCH--NQHVLHRDIKGSNLLIDNEGILTIADFGLA 266 (495)
Q Consensus 209 ~~~~~~~l~e~~~~~i~~qil~~L~~LH--~~givHrDlKp~NILl~~~~~vkL~DFG~a 266 (495)
.. ..++.-=+..|.-.| +.+.+|+|..|+||+-|..|.+||.|-+..
T Consensus 142 -------~~----~N~i~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~L 190 (308)
T PF07387_consen 142 -------NF----SNFITAGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVCL 190 (308)
T ss_pred -------ch----hHHHHHhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhhh
Confidence 01 111111245677778 347999999999999999999999998754
No 500
>PRK10271 thiK thiamine kinase; Provisional
Probab=94.48 E-value=0.028 Score=51.70 Aligned_cols=30 Identities=30% Similarity=0.399 Sum_probs=26.3
Q ss_pred CceeccCCCCCeeeCCCCcEEEeeccccccc
Q 011041 239 HVLHRDIKGSNLLIDNEGILTIADFGLASFF 269 (495)
Q Consensus 239 givHrDlKp~NILl~~~~~vkL~DFG~a~~~ 269 (495)
-.+|+|+.|+||+++++| ++|+||+.+...
T Consensus 78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~g 107 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG-LRLIDWEYAGDG 107 (188)
T ss_pred eeecCCCCCccEEEECCC-EEEEeCCcccCC
Confidence 469999999999998887 999999998654
Done!