Query 011044
Match_columns 495
No_of_seqs 515 out of 5024
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 07:29:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011044.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011044hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2.5E-51 5.4E-56 454.4 34.8 324 10-340 27-375 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.2E-36 2.6E-41 337.4 22.8 304 54-359 139-442 (968)
3 KOG4194 Membrane glycoprotein 100.0 8.1E-33 1.8E-37 264.9 7.4 326 54-383 77-429 (873)
4 KOG4194 Membrane glycoprotein 100.0 4.1E-33 8.8E-38 266.9 4.5 319 55-377 125-446 (873)
5 KOG0444 Cytoskeletal regulator 100.0 3.4E-31 7.3E-36 255.6 -4.7 317 55-382 55-374 (1255)
6 KOG0444 Cytoskeletal regulator 100.0 1.3E-30 2.7E-35 251.7 -1.5 296 54-358 77-375 (1255)
7 KOG0472 Leucine-rich repeat pr 99.9 4.1E-28 8.8E-33 223.3 -8.3 93 288-383 426-541 (565)
8 KOG0472 Leucine-rich repeat pr 99.9 2.1E-27 4.5E-32 218.6 -5.9 292 55-358 183-541 (565)
9 PLN03210 Resistant to P. syrin 99.9 2.9E-22 6.3E-27 223.3 22.8 308 56-381 590-904 (1153)
10 PLN03210 Resistant to P. syrin 99.9 2.4E-21 5.2E-26 216.0 21.9 288 54-356 610-904 (1153)
11 PRK15387 E3 ubiquitin-protein 99.8 1.5E-20 3.4E-25 195.4 16.4 263 55-363 201-463 (788)
12 KOG0618 Serine/threonine phosp 99.8 1.1E-22 2.3E-27 205.7 0.3 245 103-356 241-487 (1081)
13 PRK15370 E3 ubiquitin-protein 99.8 3.9E-20 8.4E-25 193.6 17.7 313 9-358 60-428 (754)
14 KOG0618 Serine/threonine phosp 99.8 6.3E-23 1.4E-27 207.3 -4.1 309 56-381 157-487 (1081)
15 PRK15370 E3 ubiquitin-protein 99.8 6.5E-20 1.4E-24 192.0 11.0 252 48-334 173-428 (754)
16 KOG4237 Extracellular matrix p 99.8 9.6E-22 2.1E-26 181.2 -2.7 134 54-188 66-200 (498)
17 PRK15387 E3 ubiquitin-protein 99.8 5.6E-19 1.2E-23 183.9 17.0 244 55-341 222-465 (788)
18 cd00116 LRR_RI Leucine-rich re 99.8 1E-20 2.2E-25 183.7 0.7 203 59-262 2-235 (319)
19 cd00116 LRR_RI Leucine-rich re 99.8 5E-20 1.1E-24 178.8 -0.5 254 83-358 2-291 (319)
20 KOG4237 Extracellular matrix p 99.8 2.2E-20 4.7E-25 172.3 -3.4 293 61-357 52-358 (498)
21 KOG0617 Ras suppressor protein 99.7 6.5E-19 1.4E-23 144.6 -4.2 155 77-237 31-186 (264)
22 KOG0617 Ras suppressor protein 99.7 1.2E-18 2.5E-23 143.2 -3.1 161 127-294 32-193 (264)
23 PLN03150 hypothetical protein; 99.6 6.7E-15 1.4E-19 153.8 14.4 151 6-163 366-526 (623)
24 KOG1187 Serine/threonine prote 99.6 5.2E-15 1.1E-19 143.9 7.7 105 377-486 246-353 (361)
25 COG4886 Leucine-rich repeat (L 99.2 1.6E-11 3.5E-16 122.7 8.2 178 101-288 114-292 (394)
26 KOG3207 Beta-tubulin folding c 99.2 5.2E-12 1.1E-16 119.0 2.6 111 248-358 197-314 (505)
27 KOG1909 Ran GTPase-activating 99.2 2.8E-12 6E-17 117.7 0.3 249 54-333 29-310 (382)
28 COG4886 Leucine-rich repeat (L 99.2 4E-11 8.6E-16 119.9 7.5 174 152-334 116-290 (394)
29 KOG0532 Leucine-rich repeat (L 99.2 8.3E-13 1.8E-17 128.1 -4.7 170 58-237 78-247 (722)
30 KOG1909 Ran GTPase-activating 99.2 8E-12 1.7E-16 114.7 1.2 217 55-285 58-310 (382)
31 KOG0532 Leucine-rich repeat (L 99.2 1.6E-12 3.4E-17 126.2 -3.5 196 77-283 73-270 (722)
32 KOG1259 Nischarin, modulator o 99.1 1.1E-11 2.5E-16 111.2 1.8 133 220-359 280-413 (490)
33 KOG3207 Beta-tubulin folding c 99.1 5.2E-12 1.1E-16 119.0 -0.4 226 59-286 97-339 (505)
34 PF14580 LRR_9: Leucine-rich r 99.1 1.4E-10 3.1E-15 99.8 6.2 105 56-165 20-126 (175)
35 KOG4658 Apoptotic ATPase [Sign 99.1 1E-10 2.3E-15 125.2 5.6 271 56-334 524-807 (889)
36 KOG4658 Apoptotic ATPase [Sign 99.1 1.4E-10 2.9E-15 124.3 5.8 275 75-357 519-806 (889)
37 PLN03150 hypothetical protein; 99.1 3.7E-10 8E-15 118.4 8.8 109 104-213 419-528 (623)
38 KOG1259 Nischarin, modulator o 99.0 8.5E-11 1.8E-15 105.7 2.0 142 243-391 279-420 (490)
39 PF14580 LRR_9: Leucine-rich r 99.0 5.1E-10 1.1E-14 96.4 5.1 9 271-279 138-146 (175)
40 KOG0531 Protein phosphatase 1, 98.8 5E-10 1.1E-14 112.2 -0.5 173 148-333 114-289 (414)
41 KOG0531 Protein phosphatase 1, 98.8 8.5E-10 1.9E-14 110.6 0.2 217 127-358 71-290 (414)
42 PF08263 LRRNT_2: Leucine rich 98.8 1E-08 2.2E-13 66.4 4.0 40 11-51 2-43 (43)
43 PF13855 LRR_8: Leucine rich r 98.7 1.1E-08 2.5E-13 72.3 3.9 59 56-114 2-60 (61)
44 PF13855 LRR_8: Leucine rich r 98.7 1.7E-08 3.7E-13 71.3 3.8 61 297-357 1-61 (61)
45 KOG2982 Uncharacterized conser 98.6 6.7E-09 1.5E-13 93.6 0.0 88 123-210 66-156 (418)
46 KOG2120 SCF ubiquitin ligase, 98.6 1.2E-09 2.6E-14 98.4 -5.6 177 177-355 186-373 (419)
47 KOG2120 SCF ubiquitin ligase, 98.5 1.9E-09 4.1E-14 97.1 -5.7 202 55-259 159-374 (419)
48 KOG1859 Leucine-rich repeat pr 98.5 3E-09 6.5E-14 106.6 -5.1 126 129-261 165-292 (1096)
49 KOG0197 Tyrosine kinases [Sign 98.5 2.1E-07 4.5E-12 90.9 5.6 93 375-487 370-463 (468)
50 KOG1859 Leucine-rich repeat pr 98.4 8.1E-09 1.8E-13 103.5 -5.4 180 193-384 102-293 (1096)
51 COG5238 RNA1 Ran GTPase-activa 98.4 1.6E-07 3.5E-12 83.8 2.2 138 174-311 155-317 (388)
52 COG5238 RNA1 Ran GTPase-activa 98.4 1.9E-07 4.2E-12 83.3 2.5 189 147-335 87-317 (388)
53 KOG2982 Uncharacterized conser 98.3 1.8E-07 4E-12 84.5 1.2 186 174-359 69-263 (418)
54 smart00750 KIND kinase non-cat 98.3 9E-07 2E-11 77.6 4.8 95 383-488 78-172 (176)
55 KOG0192 Tyrosine kinase specif 98.3 5.7E-07 1.2E-11 87.3 3.8 89 383-490 220-308 (362)
56 cd05080 PTKc_Tyk2_rpt2 Catalyt 98.2 6E-07 1.3E-11 85.4 2.3 99 382-486 183-282 (283)
57 cd05038 PTKc_Jak_rpt2 Catalyti 98.2 1.3E-06 2.8E-11 83.0 4.3 90 382-486 185-284 (284)
58 KOG4579 Leucine-rich repeat (L 98.2 1.2E-07 2.5E-12 75.9 -2.6 104 82-189 30-136 (177)
59 KOG4341 F-box protein containi 98.2 6.8E-08 1.5E-12 91.2 -4.9 293 80-374 139-456 (483)
60 PHA02988 hypothetical protein; 98.2 2.2E-06 4.8E-11 81.5 5.2 84 384-486 197-280 (283)
61 KOG4341 F-box protein containi 98.2 8E-08 1.7E-12 90.7 -4.7 279 104-382 139-438 (483)
62 PF07714 Pkinase_Tyr: Protein 98.1 4.8E-07 1E-11 84.9 0.3 84 379-482 175-259 (259)
63 KOG1026 Nerve growth factor re 98.1 3E-06 6.5E-11 87.4 4.6 90 379-488 675-765 (774)
64 cd05048 PTKc_Ror Catalytic Dom 98.1 3.2E-06 7E-11 80.3 4.1 86 379-484 196-282 (283)
65 KOG4579 Leucine-rich repeat (L 98.0 5.9E-07 1.3E-11 72.0 -1.0 84 151-237 52-136 (177)
66 KOG3665 ZYG-1-like serine/thre 98.0 1.5E-06 3.2E-11 91.3 1.5 179 56-237 61-263 (699)
67 cd05094 PTKc_TrkC Catalytic do 98.0 5.6E-06 1.2E-10 79.0 5.1 86 382-487 198-284 (291)
68 cd05043 PTK_Ryk Pseudokinase d 98.0 3.2E-06 6.9E-11 80.2 3.4 86 383-488 193-279 (280)
69 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 98.0 2E-06 4.4E-11 81.7 1.7 99 382-486 184-284 (284)
70 cd05111 PTK_HER3 Pseudokinase 98.0 4.6E-06 1E-10 79.1 3.5 89 379-487 181-270 (279)
71 cd05060 PTKc_Syk_like Catalyti 98.0 4.3E-06 9.3E-11 78.2 3.2 88 379-486 168-256 (257)
72 cd05052 PTKc_Abl Catalytic dom 98.0 7.5E-06 1.6E-10 76.9 4.8 87 379-485 175-262 (263)
73 cd08224 STKc_Nek6_Nek7 Catalyt 98.0 8.4E-06 1.8E-10 76.6 5.2 87 383-486 180-266 (267)
74 cd05063 PTKc_EphR_A2 Catalytic 98.0 4.3E-06 9.3E-11 78.7 3.0 83 383-485 184-267 (268)
75 cd05102 PTKc_VEGFR3 Catalytic 98.0 6.9E-06 1.5E-10 80.3 4.6 85 383-486 250-335 (338)
76 cd05058 PTKc_Met_Ron Catalytic 98.0 7.6E-06 1.6E-10 76.7 4.6 89 379-486 172-260 (262)
77 cd08228 STKc_Nek6 Catalytic do 98.0 9.4E-06 2E-10 76.3 5.1 87 383-486 180-266 (267)
78 cd05045 PTKc_RET Catalytic dom 98.0 4.5E-06 9.8E-11 79.7 2.9 86 382-487 202-288 (290)
79 KOG3665 ZYG-1-like serine/thre 97.9 2.9E-06 6.3E-11 89.2 1.5 151 79-231 122-282 (699)
80 cd05054 PTKc_VEGFR Catalytic d 97.9 7.5E-06 1.6E-10 80.0 4.1 89 379-486 245-334 (337)
81 cd05047 PTKc_Tie Catalytic dom 97.9 9.2E-06 2E-10 76.6 4.5 84 382-485 184-268 (270)
82 cd05091 PTKc_Ror2 Catalytic do 97.9 8.8E-06 1.9E-10 77.3 4.2 82 382-483 199-281 (283)
83 cd05065 PTKc_EphR_B Catalytic 97.9 8.5E-06 1.8E-10 76.8 3.5 87 379-485 181-268 (269)
84 cd05096 PTKc_DDR1 Catalytic do 97.9 8E-06 1.7E-10 78.5 3.3 89 382-483 213-303 (304)
85 cd05089 PTKc_Tie1 Catalytic do 97.9 1.5E-05 3.3E-10 76.3 5.2 87 382-488 191-278 (297)
86 cd05035 PTKc_Axl_like Catalyti 97.9 1.7E-05 3.8E-10 74.7 5.4 83 383-485 189-272 (273)
87 cd05093 PTKc_TrkB Catalytic do 97.9 1.4E-05 3E-10 76.2 4.8 88 382-489 195-283 (288)
88 cd05033 PTKc_EphR Catalytic do 97.9 1E-05 2.2E-10 76.1 3.7 83 383-485 182-265 (266)
89 cd05072 PTKc_Lyn Catalytic dom 97.9 8.6E-06 1.9E-10 76.3 3.0 83 382-484 177-260 (261)
90 cd05101 PTKc_FGFR2 Catalytic d 97.9 1.7E-05 3.6E-10 76.3 5.0 85 383-487 213-298 (304)
91 cd05079 PTKc_Jak1_rpt2 Catalyt 97.9 2.1E-05 4.6E-10 74.7 5.7 89 382-485 185-283 (284)
92 cd08528 STKc_Nek10 Catalytic d 97.9 1.1E-05 2.5E-10 75.9 3.8 85 380-483 184-268 (269)
93 cd05097 PTKc_DDR_like Catalyti 97.8 9.7E-06 2.1E-10 77.6 3.2 92 379-483 201-294 (295)
94 cd05053 PTKc_FGFR Catalytic do 97.8 2.7E-05 5.8E-10 74.4 6.1 84 382-485 207-291 (293)
95 cd08229 STKc_Nek7 Catalytic do 97.8 2.1E-05 4.5E-10 74.0 5.2 86 383-485 180-265 (267)
96 cd05106 PTKc_CSF-1R Catalytic 97.8 1.4E-05 3.1E-10 79.2 4.2 88 379-485 284-372 (374)
97 cd05110 PTKc_HER4 Catalytic do 97.8 9.2E-06 2E-10 78.1 2.8 86 382-487 184-270 (303)
98 cd05082 PTKc_Csk Catalytic dom 97.8 1.4E-05 3.1E-10 74.6 3.9 84 382-485 172-256 (256)
99 cd05104 PTKc_Kit Catalytic dom 97.8 1.5E-05 3.3E-10 79.0 4.0 84 382-484 289-373 (375)
100 cd05114 PTKc_Tec_Rlk Catalytic 97.8 2.1E-05 4.6E-10 73.4 4.5 80 383-482 175-255 (256)
101 cd05095 PTKc_DDR2 Catalytic do 97.8 1.7E-05 3.6E-10 76.0 3.9 86 382-483 205-295 (296)
102 cd05098 PTKc_FGFR1 Catalytic d 97.8 2.5E-05 5.4E-10 75.2 5.1 86 383-488 216-302 (307)
103 cd05068 PTKc_Frk_like Catalyti 97.8 1.8E-05 3.9E-10 74.2 4.0 86 379-484 174-260 (261)
104 cd05108 PTKc_EGFR Catalytic do 97.7 1.8E-05 3.9E-10 76.6 3.2 85 383-487 185-270 (316)
105 cd05040 PTKc_Ack_like Catalyti 97.7 2.8E-05 6.1E-10 72.6 4.4 86 379-483 170-256 (257)
106 cd05085 PTKc_Fer Catalytic dom 97.7 2.7E-05 5.8E-10 72.4 4.2 86 378-483 163-249 (250)
107 cd05051 PTKc_DDR Catalytic dom 97.7 2.2E-05 4.8E-10 75.0 3.7 92 379-483 202-295 (296)
108 cd05075 PTKc_Axl Catalytic dom 97.7 3.4E-05 7.3E-10 72.7 4.7 86 380-485 185-271 (272)
109 KOG0194 Protein tyrosine kinas 97.7 2.8E-05 6E-10 77.2 4.2 91 378-488 331-423 (474)
110 cd05050 PTKc_Musk Catalytic do 97.7 2.5E-05 5.4E-10 74.4 3.7 85 379-483 202-287 (288)
111 cd06621 PKc_MAPKK_Pek1_like Ca 97.7 4.3E-05 9.3E-10 72.8 5.3 86 383-480 177-265 (287)
112 cd05064 PTKc_EphR_A10 Catalyti 97.7 3.1E-05 6.8E-10 72.8 4.3 84 382-485 181-265 (266)
113 cd05116 PTKc_Syk Catalytic dom 97.7 3E-05 6.6E-10 72.4 4.1 82 383-484 172-254 (257)
114 cd05099 PTKc_FGFR4 Catalytic d 97.7 5E-05 1.1E-09 73.4 5.7 89 379-487 206-295 (314)
115 KOG1644 U2-associated snRNP A' 97.7 9.2E-05 2E-09 63.8 6.4 84 79-165 42-126 (233)
116 cd05100 PTKc_FGFR3 Catalytic d 97.7 4.4E-05 9.6E-10 74.5 5.3 85 383-487 210-295 (334)
117 cd05109 PTKc_HER2 Catalytic do 97.7 2.4E-05 5.2E-10 74.1 3.2 87 382-488 184-271 (279)
118 cd05148 PTKc_Srm_Brk Catalytic 97.7 2.3E-05 5E-10 73.4 3.0 83 382-484 177-260 (261)
119 PRK15386 type III secretion pr 97.7 0.00013 2.9E-09 71.0 8.1 32 200-234 156-187 (426)
120 cd08529 STKc_FA2-like Catalyti 97.7 2.5E-05 5.4E-10 72.8 3.2 82 379-480 171-252 (256)
121 PF12799 LRR_4: Leucine Rich r 97.7 4E-05 8.7E-10 49.6 3.0 34 81-115 3-36 (44)
122 cd06605 PKc_MAPKK Catalytic do 97.7 3.8E-05 8.3E-10 72.0 4.3 88 379-480 169-256 (265)
123 KOG1644 U2-associated snRNP A' 97.7 6.4E-05 1.4E-09 64.7 5.0 103 56-162 43-150 (233)
124 cd05049 PTKc_Trk Catalytic dom 97.7 3.6E-05 7.9E-10 72.9 4.0 81 383-483 198-279 (280)
125 cd05036 PTKc_ALK_LTK Catalytic 97.7 4.2E-05 9.1E-10 72.4 4.3 86 378-483 190-276 (277)
126 cd05088 PTKc_Tie2 Catalytic do 97.7 5.9E-05 1.3E-09 72.5 5.3 83 384-486 198-281 (303)
127 cd05074 PTKc_Tyro3 Catalytic d 97.7 2.7E-05 6E-10 73.4 3.0 83 383-485 189-272 (273)
128 cd05115 PTKc_Zap-70 Catalytic 97.7 4.8E-05 1E-09 71.2 4.5 83 383-485 172-255 (257)
129 cd05112 PTKc_Itk Catalytic dom 97.7 4.1E-05 8.9E-10 71.4 4.0 84 379-482 171-255 (256)
130 cd08218 STKc_Nek1 Catalytic do 97.7 4.9E-05 1.1E-09 70.9 4.5 82 379-480 171-252 (256)
131 cd06642 STKc_STK25-YSK1 Cataly 97.6 3.2E-05 7E-10 73.2 3.2 79 382-480 174-252 (277)
132 PF12799 LRR_4: Leucine Rich r 97.6 6E-05 1.3E-09 48.8 3.4 34 130-164 3-36 (44)
133 cd05044 PTKc_c-ros Catalytic d 97.6 5.6E-05 1.2E-09 71.1 4.8 85 379-483 183-268 (269)
134 cd05066 PTKc_EphR_A Catalytic 97.6 3.3E-05 7.2E-10 72.6 3.3 87 379-485 179-266 (267)
135 cd05105 PTKc_PDGFR_alpha Catal 97.6 3.8E-05 8.2E-10 76.8 3.6 86 382-486 312-398 (400)
136 KOG1095 Protein tyrosine kinas 97.6 5.1E-05 1.1E-09 81.4 4.6 90 379-488 874-964 (1025)
137 cd05062 PTKc_IGF-1R Catalytic 97.6 4.2E-05 9.2E-10 72.4 3.5 81 383-483 195-276 (277)
138 PRK15386 type III secretion pr 97.6 0.00023 5E-09 69.3 8.4 56 100-162 49-104 (426)
139 cd05059 PTKc_Tec_like Catalyti 97.6 3.8E-05 8.2E-10 71.7 2.8 81 382-482 174-255 (256)
140 cd05055 PTKc_PDGFR Catalytic d 97.6 4.4E-05 9.5E-10 73.4 3.3 85 382-485 216-301 (302)
141 KOG1024 Receptor-like protein 97.6 2.3E-05 4.9E-10 73.9 1.2 83 384-486 473-556 (563)
142 cd05090 PTKc_Ror1 Catalytic do 97.6 8.4E-05 1.8E-09 70.6 4.8 83 382-484 199-282 (283)
143 cd05092 PTKc_TrkA Catalytic do 97.6 6.9E-05 1.5E-09 71.1 4.2 82 382-483 197-279 (280)
144 cd05084 PTKc_Fes Catalytic dom 97.6 3.2E-05 6.9E-10 72.0 1.7 82 382-483 169-251 (252)
145 cd05057 PTKc_EGFR_like Catalyt 97.6 0.0001 2.3E-09 69.7 5.3 85 383-487 185-270 (279)
146 cd05070 PTKc_Fyn_Yrk Catalytic 97.6 7.9E-05 1.7E-09 69.7 4.4 86 379-484 173-259 (260)
147 cd08225 STKc_Nek5 Catalytic do 97.5 5.7E-05 1.2E-09 70.4 3.4 78 383-480 176-253 (257)
148 cd06620 PKc_MAPKK_Byr1_like Ca 97.5 5.4E-05 1.2E-09 71.9 3.3 86 383-482 176-267 (284)
149 cd05069 PTKc_Yes Catalytic dom 97.5 4.8E-05 1E-09 71.2 2.7 86 379-484 173-259 (260)
150 cd05083 PTKc_Chk Catalytic dom 97.5 8E-05 1.7E-09 69.4 4.2 82 382-483 170-252 (254)
151 cd05056 PTKc_FAK Catalytic dom 97.5 7.9E-05 1.7E-09 70.2 4.1 84 384-487 183-267 (270)
152 cd05039 PTKc_Csk_like Catalyti 97.5 7.1E-05 1.5E-09 69.8 3.7 84 382-485 172-256 (256)
153 cd05086 PTKc_Aatyk2 Catalytic 97.5 9.6E-05 2.1E-09 69.6 4.5 83 385-483 184-267 (268)
154 cd05113 PTKc_Btk_Bmx Catalytic 97.5 7E-05 1.5E-09 70.0 3.5 81 382-482 174-255 (256)
155 cd05032 PTKc_InsR_like Catalyt 97.5 8.7E-05 1.9E-09 70.1 4.2 82 382-483 194-276 (277)
156 cd06609 STKc_MST3_like Catalyt 97.5 8.1E-05 1.8E-09 70.3 3.9 83 379-480 168-250 (274)
157 cd05067 PTKc_Lck_Blk Catalytic 97.5 0.00011 2.4E-09 68.8 4.7 82 383-484 177-259 (260)
158 cd08220 STKc_Nek8 Catalytic do 97.5 8.4E-05 1.8E-09 69.2 3.8 77 384-480 176-252 (256)
159 cd05071 PTKc_Src Catalytic dom 97.5 0.0001 2.2E-09 69.2 4.3 86 379-484 173-259 (262)
160 cd08223 STKc_Nek4 Catalytic do 97.5 0.0001 2.2E-09 68.8 4.2 79 382-480 175-253 (257)
161 cd06612 STKc_MST1_2 Catalytic 97.5 5.6E-05 1.2E-09 70.4 2.2 80 383-480 173-252 (256)
162 cd05073 PTKc_Hck Catalytic dom 97.5 8.3E-05 1.8E-09 69.6 3.3 83 382-484 176-259 (260)
163 cd05103 PTKc_VEGFR2 Catalytic 97.4 9.3E-05 2E-09 72.5 3.5 85 383-486 255-340 (343)
164 cd00192 PTKc Catalytic domain 97.4 0.00012 2.6E-09 68.3 4.0 80 383-482 181-261 (262)
165 cd05061 PTKc_InsR Catalytic do 97.4 0.00013 2.8E-09 69.5 4.2 87 379-485 191-278 (288)
166 cd06654 STKc_PAK1 Catalytic do 97.4 0.00013 2.8E-09 69.9 4.0 80 383-480 190-269 (296)
167 cd06640 STKc_MST4 Catalytic do 97.4 0.00015 3.2E-09 68.7 4.2 80 382-481 174-253 (277)
168 cd06619 PKc_MKK5 Catalytic dom 97.4 0.00023 5E-09 67.4 5.4 88 379-480 163-252 (279)
169 KOG2345 Serine/threonine prote 97.4 0.00016 3.5E-09 64.2 3.9 92 377-485 209-300 (302)
170 cd08217 STKc_Nek2 Catalytic do 97.4 0.00016 3.5E-09 67.6 4.1 78 383-480 184-261 (265)
171 PHA02882 putative serine/threo 97.4 5.8E-05 1.3E-09 72.2 1.0 83 382-482 206-293 (294)
172 cd06610 STKc_OSR1_SPAK Catalyt 97.4 0.00013 2.7E-09 68.5 3.2 81 385-480 183-263 (267)
173 cd05107 PTKc_PDGFR_beta Cataly 97.4 0.00016 3.4E-09 72.4 4.0 84 383-485 315-399 (401)
174 KOG0200 Fibroblast/platelet-de 97.4 0.00015 3.2E-09 76.4 3.9 88 379-485 491-579 (609)
175 KOG2123 Uncharacterized conser 97.4 9.2E-06 2E-10 73.1 -4.2 100 55-158 19-123 (388)
176 KOG0193 Serine/threonine prote 97.3 0.00015 3.3E-09 72.3 3.6 86 386-487 570-655 (678)
177 KOG2123 Uncharacterized conser 97.3 2.1E-05 4.6E-10 70.8 -2.3 101 199-303 18-123 (388)
178 cd05041 PTKc_Fes_like Catalyti 97.3 0.00022 4.8E-09 66.2 4.2 81 383-483 169-250 (251)
179 cd06637 STKc_TNIK Catalytic do 97.3 0.00021 4.6E-09 67.2 4.2 77 385-480 192-268 (272)
180 PF13306 LRR_5: Leucine rich r 97.3 0.001 2.2E-08 54.8 7.5 105 74-184 7-111 (129)
181 cd05087 PTKc_Aatyk1_Aatyk3 Cat 97.3 0.00021 4.6E-09 67.2 3.8 82 386-483 186-268 (269)
182 cd06638 STKc_myosinIIIA Cataly 97.3 0.00027 5.8E-09 67.1 4.5 80 384-481 204-283 (286)
183 PF13306 LRR_5: Leucine rich r 97.3 0.00066 1.4E-08 55.9 6.2 13 99-111 8-20 (129)
184 cd06624 STKc_ASK Catalytic dom 97.3 0.00017 3.7E-09 67.8 2.9 77 386-480 188-264 (268)
185 cd06651 STKc_MEKK3 Catalytic d 97.3 0.00024 5.2E-09 66.7 3.8 79 382-480 182-260 (266)
186 cd06623 PKc_MAPKK_plant_like C 97.3 0.00032 6.8E-09 65.6 4.6 82 383-480 174-255 (264)
187 cd05034 PTKc_Src_like Catalyti 97.3 0.00017 3.6E-09 67.5 2.7 86 379-484 174-260 (261)
188 KOG4721 Serine/threonine prote 97.2 0.00021 4.6E-09 70.7 3.4 88 379-485 281-368 (904)
189 PTZ00283 serine/threonine prot 97.2 0.00021 4.5E-09 73.6 3.5 79 382-480 218-296 (496)
190 cd08219 STKc_Nek3 Catalytic do 97.2 0.00025 5.5E-09 66.1 3.7 78 384-481 175-252 (255)
191 cd06606 STKc_MAPKKK Catalytic 97.2 0.00029 6.3E-09 65.5 4.1 83 379-480 173-256 (260)
192 KOG0196 Tyrosine kinase, EPH ( 97.2 0.00016 3.4E-09 74.2 2.3 88 378-485 803-891 (996)
193 cd06607 STKc_TAO Catalytic dom 97.2 0.0003 6.5E-09 67.7 4.2 78 384-480 189-266 (307)
194 cd07831 STKc_MOK Catalytic dom 97.2 0.00019 4.2E-09 67.9 2.7 93 384-480 174-278 (282)
195 cd06629 STKc_MAPKKK_Bck1_like 97.2 0.00027 5.8E-09 66.6 3.7 80 386-480 189-268 (272)
196 KOG4278 Protein tyrosine kinas 97.2 0.00042 9.1E-09 69.3 4.7 83 382-484 439-522 (1157)
197 cd05122 PKc_STE Catalytic doma 97.2 0.00033 7.2E-09 64.8 4.0 80 383-480 171-250 (253)
198 cd06639 STKc_myosinIIIB Cataly 97.2 0.00035 7.7E-09 66.5 4.2 78 385-480 209-286 (291)
199 cd06643 STKc_SLK Catalytic dom 97.2 0.00041 8.9E-09 65.8 4.6 78 385-480 184-261 (282)
200 KOG1947 Leucine rich repeat pr 97.2 4.4E-05 9.5E-10 78.5 -2.3 237 101-357 186-439 (482)
201 KOG2739 Leucine-rich acidic nu 97.2 0.00019 4.2E-09 64.4 2.0 107 271-380 41-153 (260)
202 cd06649 PKc_MEK2 Catalytic dom 97.2 0.00031 6.7E-09 68.4 3.6 32 379-410 172-203 (331)
203 cd08227 PK_STRAD_alpha Pseudok 97.2 0.00029 6.3E-09 68.5 3.4 26 386-411 187-212 (327)
204 cd05078 PTK_Jak2_Jak3_rpt1 Pse 97.2 0.00031 6.6E-09 65.7 3.4 76 386-482 182-257 (258)
205 cd05076 PTK_Tyk2_rpt1 Pseudoki 97.1 0.00025 5.5E-09 67.0 2.8 77 384-482 196-273 (274)
206 cd06618 PKc_MKK7 Catalytic dom 97.1 0.00035 7.6E-09 66.8 3.7 79 385-480 194-272 (296)
207 cd08221 STKc_Nek9 Catalytic do 97.1 0.00051 1.1E-08 64.0 4.6 79 383-481 175-253 (256)
208 cd06608 STKc_myosinIII_like Ca 97.1 0.00043 9.4E-09 65.1 4.1 78 385-480 194-271 (275)
209 KOG2739 Leucine-rich acidic nu 97.1 0.00029 6.4E-09 63.3 2.7 90 73-165 37-129 (260)
210 smart00220 S_TKc Serine/Threon 97.1 0.00049 1.1E-08 63.1 4.3 81 383-480 160-240 (244)
211 cd06614 STKc_PAK Catalytic dom 97.1 0.00051 1.1E-08 65.3 4.5 79 384-480 191-269 (286)
212 KOG0581 Mitogen-activated prot 97.1 0.00041 8.9E-09 65.3 3.6 87 379-479 247-333 (364)
213 cd06616 PKc_MKK4 Catalytic dom 97.1 0.00037 8E-09 66.3 3.3 81 385-480 186-266 (288)
214 cd06611 STKc_SLK_like Catalyti 97.1 0.00054 1.2E-08 64.8 4.4 79 384-480 183-261 (280)
215 cd07846 STKc_CDKL2_3 Catalytic 97.1 0.00033 7.2E-09 66.5 2.9 92 385-480 177-282 (286)
216 PLN00034 mitogen-activated pro 97.1 0.00042 9E-09 68.2 3.6 77 387-480 251-327 (353)
217 cd06655 STKc_PAK2 Catalytic do 97.1 0.00044 9.6E-09 66.2 3.7 80 383-480 189-268 (296)
218 KOG0199 ACK and related non-re 97.1 0.00072 1.6E-08 68.7 5.1 85 378-482 284-369 (1039)
219 cd06648 STKc_PAK_II Catalytic 97.1 0.00054 1.2E-08 65.2 4.2 80 383-480 189-268 (285)
220 smart00219 TyrKc Tyrosine kina 97.1 0.00049 1.1E-08 64.0 3.8 81 382-482 177-258 (258)
221 cd07833 STKc_CDKL Catalytic do 97.1 0.00029 6.2E-09 66.9 2.3 94 385-480 178-284 (288)
222 cd07859 STKc_TDY_MAPK_plant Ca 97.0 0.00018 4E-09 70.1 0.8 95 384-480 183-289 (338)
223 cd05046 PTK_CCK4 Pseudokinase 97.0 0.00058 1.3E-08 64.4 4.2 82 383-483 192-274 (275)
224 cd05042 PTKc_Aatyk Catalytic d 97.0 0.00053 1.1E-08 64.5 3.7 83 384-482 184-267 (269)
225 cd06631 STKc_YSK4 Catalytic do 97.0 0.00052 1.1E-08 64.3 3.6 79 384-480 183-261 (265)
226 cd06635 STKc_TAO1 Catalytic do 97.0 0.00062 1.3E-08 65.8 4.2 79 384-481 199-277 (317)
227 cd06613 STKc_MAP4K3_like Catal 97.0 0.00071 1.5E-08 63.2 4.4 80 385-480 180-259 (262)
228 cd06634 STKc_TAO2 Catalytic do 97.0 0.00074 1.6E-08 65.0 4.6 78 384-480 189-266 (308)
229 cd06641 STKc_MST3 Catalytic do 97.0 0.00064 1.4E-08 64.3 4.1 78 383-480 175-252 (277)
230 KOG1947 Leucine rich repeat pr 97.0 0.00018 3.8E-09 74.0 0.2 224 114-358 174-414 (482)
231 cd06659 STKc_PAK6 Catalytic do 97.0 0.00067 1.5E-08 64.9 4.2 80 383-480 191-270 (297)
232 cd06615 PKc_MEK Catalytic doma 97.0 0.00098 2.1E-08 64.1 5.3 97 383-481 172-287 (308)
233 cd07862 STKc_CDK6 Catalytic do 97.0 0.00058 1.3E-08 65.0 3.6 95 384-480 184-286 (290)
234 cd06633 STKc_TAO3 Catalytic do 97.0 0.00061 1.3E-08 65.8 3.8 78 384-480 195-272 (313)
235 cd08530 STKc_CNK2-like Catalyt 97.0 0.00082 1.8E-08 62.5 4.6 78 383-480 175-252 (256)
236 cd07848 STKc_CDKL5 Catalytic d 97.0 0.00068 1.5E-08 64.4 4.1 28 383-410 175-202 (287)
237 cd06625 STKc_MEKK3_like Cataly 97.0 0.00058 1.3E-08 63.8 3.5 78 384-480 182-259 (263)
238 cd06917 STKc_NAK1_like Catalyt 97.0 0.00057 1.2E-08 64.5 3.5 76 386-480 179-254 (277)
239 cd06644 STKc_STK10_LOK Catalyt 97.0 0.00089 1.9E-08 63.8 4.7 77 386-480 192-268 (292)
240 cd05037 PTK_Jak_rpt1 Pseudokin 97.0 0.00059 1.3E-08 63.6 3.3 76 385-482 182-258 (259)
241 cd06658 STKc_PAK5 Catalytic do 96.9 0.0007 1.5E-08 64.6 3.8 79 384-480 193-271 (292)
242 cd06632 STKc_MEKK1_plant Catal 96.9 0.0004 8.7E-09 64.7 2.1 75 386-480 179-254 (258)
243 cd06626 STKc_MEKK4 Catalytic d 96.9 0.001 2.2E-08 62.3 4.8 78 386-480 183-260 (264)
244 cd07840 STKc_CDK9_like Catalyt 96.9 0.00025 5.4E-09 67.3 0.6 90 386-480 179-283 (287)
245 cd06646 STKc_MAP4K5 Catalytic 96.9 0.00046 1E-08 64.8 2.3 80 385-480 185-264 (267)
246 cd05607 STKc_GRK7 Catalytic do 96.9 0.00051 1.1E-08 65.0 2.6 84 382-481 167-250 (277)
247 cd08222 STKc_Nek11 Catalytic d 96.9 0.00096 2.1E-08 62.3 4.3 77 384-480 180-256 (260)
248 cd07838 STKc_CDK4_6_like Catal 96.9 0.00076 1.7E-08 63.9 3.7 98 382-480 179-283 (287)
249 PLN00181 protein SPA1-RELATED; 96.9 0.00061 1.3E-08 74.6 3.3 81 378-480 184-264 (793)
250 cd07830 STKc_MAK_like Catalyti 96.9 0.001 2.3E-08 62.9 4.6 93 385-480 175-279 (283)
251 KOG0198 MEKK and related serin 96.9 0.00075 1.6E-08 63.9 3.1 75 388-480 201-275 (313)
252 cd06645 STKc_MAP4K3 Catalytic 96.9 0.00097 2.1E-08 62.6 3.8 81 384-480 184-264 (267)
253 PHA03390 pk1 serine/threonine- 96.8 0.00077 1.7E-08 63.4 3.1 80 383-479 180-260 (267)
254 cd07874 STKc_JNK3 Catalytic do 96.8 0.00082 1.8E-08 66.1 3.4 27 384-410 193-219 (355)
255 cd06628 STKc_MAPKKK_Byr2_like 96.8 0.001 2.2E-08 62.3 3.8 78 383-480 186-263 (267)
256 PLN00009 cyclin-dependent kina 96.8 0.00056 1.2E-08 65.3 2.0 90 385-480 180-283 (294)
257 cd07835 STKc_CDK1_like Catalyt 96.8 0.00038 8.3E-09 66.0 0.7 94 386-480 177-279 (283)
258 KOG0596 Dual specificity; seri 96.8 0.00086 1.9E-08 66.4 3.1 80 383-480 546-626 (677)
259 cd06617 PKc_MKK3_6 Catalytic d 96.8 0.0012 2.5E-08 62.6 3.9 77 386-480 184-260 (283)
260 cd06636 STKc_MAP4K4_6 Catalyti 96.8 0.00098 2.1E-08 63.1 3.4 78 384-480 201-278 (282)
261 cd08216 PK_STRAD Pseudokinase 96.8 0.0018 3.8E-08 62.5 5.2 25 386-410 187-211 (314)
262 cd07852 STKc_MAPK15 Catalytic 96.8 0.00064 1.4E-08 66.4 2.1 94 385-480 189-294 (337)
263 PTZ00267 NIMA-related protein 96.8 0.00093 2E-08 68.6 3.4 78 383-480 245-322 (478)
264 cd05077 PTK_Jak1_rpt1 Pseudoki 96.8 0.00096 2.1E-08 62.5 3.2 77 384-482 184-261 (262)
265 cd05609 STKc_MAST Catalytic do 96.8 0.00097 2.1E-08 64.1 3.2 83 383-483 190-272 (305)
266 cd08215 STKc_Nek Catalytic dom 96.8 0.0014 2.9E-08 60.9 4.1 78 383-480 177-254 (258)
267 cd07855 STKc_ERK5 Catalytic do 96.8 0.00064 1.4E-08 66.3 1.9 94 385-480 188-293 (334)
268 cd07860 STKc_CDK2_3 Catalytic 96.7 0.0005 1.1E-08 65.2 1.0 24 386-409 178-201 (284)
269 cd07865 STKc_CDK9 Catalytic do 96.7 0.00059 1.3E-08 65.6 1.5 25 456-480 282-306 (310)
270 cd06647 STKc_PAK_I Catalytic d 96.7 0.0011 2.3E-08 63.4 3.1 80 383-480 189-268 (293)
271 cd07858 STKc_TEY_MAPK_plant Ca 96.7 0.00097 2.1E-08 65.1 2.9 94 385-480 185-290 (337)
272 cd06656 STKc_PAK3 Catalytic do 96.7 0.00061 1.3E-08 65.2 1.3 80 383-480 189-268 (297)
273 cd07861 STKc_CDK1_euk Catalyti 96.7 0.00055 1.2E-08 64.9 0.9 25 386-410 179-203 (285)
274 cd05631 STKc_GRK4 Catalytic do 96.7 0.0014 3E-08 62.3 3.7 82 382-480 174-260 (285)
275 cd07839 STKc_CDK5 Catalytic do 96.7 0.00091 2E-08 63.4 2.3 91 386-480 177-280 (284)
276 cd06650 PKc_MEK1 Catalytic dom 96.7 0.0012 2.7E-08 64.3 3.1 28 383-410 176-203 (333)
277 KOG1023 Natriuretic peptide re 96.7 0.0019 4.1E-08 64.7 4.3 88 386-485 135-224 (484)
278 PF00069 Pkinase: Protein kina 96.6 0.00042 9.1E-09 64.6 -0.3 84 383-480 173-256 (260)
279 cd07851 STKc_p38 Catalytic dom 96.6 0.00054 1.2E-08 67.1 0.3 90 385-480 192-297 (343)
280 cd06622 PKc_MAPKK_PBS2_like Ca 96.6 0.0021 4.6E-08 60.9 4.3 76 385-480 183-261 (286)
281 cd07879 STKc_p38delta_MAPK13 C 96.6 0.00084 1.8E-08 65.7 1.5 26 385-410 191-216 (342)
282 cd08226 PK_STRAD_beta Pseudoki 96.6 0.00095 2.1E-08 64.9 1.9 28 453-480 280-307 (328)
283 cd05618 STKc_aPKC_iota Catalyt 96.6 0.002 4.3E-08 62.7 4.1 78 382-474 169-249 (329)
284 cd07870 STKc_PFTAIRE2 Catalyti 96.6 0.00046 1E-08 65.8 -0.5 25 386-410 181-205 (291)
285 cd06630 STKc_MEKK1 Catalytic d 96.6 0.0024 5.1E-08 59.9 4.3 81 384-480 183-263 (268)
286 cd07829 STKc_CDK_like Catalyti 96.6 0.00077 1.7E-08 63.7 0.8 94 385-480 175-278 (282)
287 cd05579 STKc_MAST_like Catalyt 96.6 0.0018 3.9E-08 60.4 3.3 81 383-482 175-255 (265)
288 cd05600 STKc_Sid2p_Dbf2p Catal 96.6 0.0027 5.8E-08 61.9 4.6 85 383-480 172-256 (333)
289 cd07842 STKc_CDK8_like Catalyt 96.5 0.0013 2.8E-08 63.4 2.4 26 455-480 287-312 (316)
290 cd05118 STKc_CMGC Catalytic do 96.5 0.0017 3.6E-08 61.5 3.1 92 385-480 175-279 (283)
291 cd05585 STKc_YPK1_like Catalyt 96.5 0.002 4.4E-08 62.1 3.7 74 383-477 167-240 (312)
292 cd05610 STKc_MASTL Catalytic d 96.5 0.0018 4E-08 69.2 3.5 85 378-480 549-633 (669)
293 PTZ00266 NIMA-related protein 96.5 0.0018 4E-08 70.5 3.5 75 385-479 219-293 (1021)
294 cd07876 STKc_JNK2 Catalytic do 96.5 0.0024 5.1E-08 63.0 3.8 28 383-410 196-223 (359)
295 cd07866 STKc_BUR1 Catalytic do 96.5 0.0018 3.9E-08 62.2 2.8 91 385-480 203-307 (311)
296 cd07847 STKc_CDKL1_4 Catalytic 96.5 0.0016 3.5E-08 61.7 2.4 93 385-480 177-282 (286)
297 PRK13184 pknD serine/threonine 96.5 0.0015 3.3E-08 70.6 2.4 89 379-485 201-290 (932)
298 cd06627 STKc_Cdc7_like Catalyt 96.4 0.0024 5.1E-08 59.2 3.3 77 384-480 174-250 (254)
299 cd07863 STKc_CDK4 Catalytic do 96.4 0.0029 6.3E-08 60.1 3.9 97 383-480 181-284 (288)
300 cd07849 STKc_ERK1_2_like Catal 96.4 0.0015 3.2E-08 63.8 1.9 94 385-480 186-291 (336)
301 PHA03207 serine/threonine kina 96.4 0.0023 5.1E-08 63.9 3.3 28 383-410 261-288 (392)
302 cd07873 STKc_PCTAIRE1 Catalyti 96.4 0.0016 3.5E-08 62.4 2.0 93 386-480 182-285 (301)
303 PTZ00284 protein kinase; Provi 96.4 0.0014 3.1E-08 67.1 1.5 28 383-410 319-346 (467)
304 cd07856 STKc_Sty1_Hog1 Catalyt 96.4 0.00095 2.1E-08 64.9 0.2 95 385-480 182-287 (328)
305 cd05611 STKc_Rim15_like Cataly 96.4 0.0028 6E-08 59.2 3.3 79 386-481 170-248 (260)
306 cd07844 STKc_PCTAIRE_like Cata 96.4 0.0026 5.7E-08 60.5 3.2 25 386-410 181-205 (291)
307 cd07853 STKc_NLK Catalytic dom 96.4 0.0016 3.5E-08 64.6 1.8 25 386-410 182-206 (372)
308 cd05574 STKc_phototropin_like 96.4 0.0028 6E-08 61.2 3.4 81 383-482 206-286 (316)
309 cd06657 STKc_PAK4 Catalytic do 96.3 0.0024 5.1E-08 61.0 2.8 80 383-480 190-269 (292)
310 cd05601 STKc_CRIK Catalytic do 96.3 0.0035 7.7E-08 60.9 4.0 27 384-410 184-210 (330)
311 cd07875 STKc_JNK1 Catalytic do 96.3 0.0034 7.3E-08 62.0 3.7 28 383-410 199-226 (364)
312 cd05573 STKc_ROCK_NDR_like Cat 96.3 0.0048 1E-07 60.5 4.7 29 382-410 203-231 (350)
313 cd05608 STKc_GRK1 Catalytic do 96.3 0.0033 7.2E-08 59.5 3.4 77 382-475 170-246 (280)
314 cd07832 STKc_CCRK Catalytic do 96.3 0.0014 2.9E-08 62.2 0.7 91 386-480 178-281 (286)
315 cd07837 STKc_CdkB_plant Cataly 96.3 0.0031 6.7E-08 60.1 3.1 91 385-480 188-290 (295)
316 cd05570 STKc_PKC Catalytic dom 96.2 0.0039 8.4E-08 60.3 3.7 76 383-479 170-250 (318)
317 cd07850 STKc_JNK Catalytic dom 96.2 0.0025 5.4E-08 62.7 2.3 28 383-410 191-218 (353)
318 cd05583 STKc_MSK_N N-terminal 96.2 0.0037 7.9E-08 59.4 3.4 80 386-483 185-265 (288)
319 cd05605 STKc_GRK4_like Catalyt 96.2 0.0037 8.1E-08 59.3 3.4 80 383-479 175-259 (285)
320 cd05632 STKc_GRK5 Catalytic do 96.2 0.0033 7.1E-08 59.7 2.9 79 382-477 174-252 (285)
321 cd07841 STKc_CDK7 Catalytic do 96.2 0.0028 6E-08 60.6 2.3 26 455-480 256-281 (298)
322 cd05578 STKc_Yank1 Catalytic d 96.2 0.0056 1.2E-07 57.0 4.3 78 383-478 173-252 (258)
323 cd07869 STKc_PFTAIRE1 Catalyti 96.2 0.0029 6.2E-08 60.7 2.3 25 386-410 181-205 (303)
324 KOG4308 LRR-containing protein 96.2 2.3E-05 5E-10 79.0 -12.5 181 81-261 89-303 (478)
325 cd05584 STKc_p70S6K Catalytic 96.2 0.0068 1.5E-07 58.8 4.9 74 385-479 176-254 (323)
326 cd05617 STKc_aPKC_zeta Catalyt 96.0 0.0059 1.3E-07 59.3 4.0 79 383-476 170-249 (327)
327 cd05588 STKc_aPKC Catalytic do 96.0 0.0053 1.1E-07 59.7 3.6 83 382-479 169-260 (329)
328 cd07864 STKc_CDK12 Catalytic d 96.0 0.0022 4.8E-08 61.4 0.8 93 386-480 195-298 (302)
329 cd05633 STKc_GRK3 Catalytic do 96.0 0.0042 9.1E-08 58.8 2.7 77 386-480 173-254 (279)
330 cd07867 STKc_CDC2L6 Catalytic 96.0 0.0025 5.4E-08 61.5 1.1 25 386-410 193-217 (317)
331 cd06652 STKc_MEKK2 Catalytic d 96.0 0.0059 1.3E-07 57.2 3.6 28 383-410 183-210 (265)
332 cd05582 STKc_RSK_N N-terminal 96.0 0.0065 1.4E-07 58.7 3.9 73 384-477 173-245 (318)
333 cd05575 STKc_SGK Catalytic dom 96.0 0.0055 1.2E-07 59.4 3.4 74 383-477 170-243 (323)
334 cd05604 STKc_SGK3 Catalytic do 96.0 0.0046 1E-07 60.0 2.9 78 383-481 170-247 (325)
335 cd05572 STKc_cGK_PKG Catalytic 95.9 0.0086 1.9E-07 55.9 4.4 77 384-477 167-243 (262)
336 cd05591 STKc_nPKC_epsilon Cata 95.9 0.0088 1.9E-07 57.9 4.6 76 383-479 170-252 (321)
337 cd05592 STKc_nPKC_theta_delta 95.9 0.0075 1.6E-07 58.2 4.1 75 383-478 170-244 (316)
338 cd07843 STKc_CDC2L1 Catalytic 95.9 0.0018 4E-08 61.6 -0.2 25 386-410 184-208 (293)
339 cd05606 STKc_beta_ARK Catalyti 95.9 0.0056 1.2E-07 57.9 3.0 77 386-480 173-254 (278)
340 cd07857 STKc_MPK1 Catalytic do 95.9 0.0026 5.7E-08 61.9 0.7 92 386-479 187-290 (332)
341 cd05571 STKc_PKB Catalytic dom 95.9 0.0097 2.1E-07 57.7 4.6 76 383-479 169-249 (323)
342 PTZ00024 cyclin-dependent prot 95.9 0.004 8.6E-08 60.7 1.8 93 386-480 211-312 (335)
343 cd07834 STKc_MAPK Catalytic do 95.8 0.0039 8.5E-08 60.5 1.7 94 385-480 183-288 (330)
344 cd05590 STKc_nPKC_eta Catalyti 95.8 0.0086 1.9E-07 58.0 3.9 72 383-475 170-241 (320)
345 cd05630 STKc_GRK6 Catalytic do 95.8 0.0061 1.3E-07 57.9 2.8 82 382-480 174-260 (285)
346 KOG0582 Ste20-like serine/thre 95.8 0.01 2.2E-07 57.5 4.1 78 387-479 210-291 (516)
347 PHA03212 serine/threonine kina 95.8 0.0056 1.2E-07 61.1 2.5 26 384-409 258-283 (391)
348 cd05614 STKc_MSK2_N N-terminal 95.8 0.0085 1.8E-07 58.3 3.7 77 386-479 184-265 (332)
349 KOG1025 Epidermal growth facto 95.7 0.0097 2.1E-07 62.0 4.0 85 382-486 873-958 (1177)
350 cd07836 STKc_Pho85 Catalytic d 95.7 0.004 8.6E-08 59.0 1.1 25 386-410 178-202 (284)
351 PHA03209 serine/threonine kina 95.7 0.0052 1.1E-07 60.5 1.8 27 383-409 230-256 (357)
352 cd05612 STKc_PRKX_like Catalyt 95.7 0.0093 2E-07 56.8 3.4 75 384-479 173-252 (291)
353 KOG1094 Discoidin domain recep 95.6 0.0077 1.7E-07 60.3 2.8 96 376-484 706-803 (807)
354 PLN03225 Serine/threonine-prot 95.6 0.011 2.3E-07 61.9 4.0 86 386-480 356-449 (566)
355 KOG0603 Ribosomal protein S6 k 95.6 0.0086 1.9E-07 60.5 3.1 78 379-479 483-561 (612)
356 cd05616 STKc_cPKC_beta Catalyt 95.6 0.0062 1.3E-07 59.0 2.1 76 379-475 171-246 (323)
357 cd05602 STKc_SGK1 Catalytic do 95.6 0.0092 2E-07 57.9 3.3 77 383-480 170-246 (325)
358 cd05589 STKc_PKN Catalytic dom 95.6 0.013 2.8E-07 56.8 4.3 73 384-477 176-248 (324)
359 cd05619 STKc_nPKC_theta Cataly 95.6 0.0061 1.3E-07 58.9 2.0 75 383-478 170-245 (316)
360 cd07868 STKc_CDK8 Catalytic do 95.6 0.0038 8.2E-08 60.3 0.5 25 386-410 193-217 (317)
361 cd05596 STKc_ROCK Catalytic do 95.6 0.014 3.1E-07 57.7 4.6 26 385-410 223-248 (370)
362 cd05603 STKc_SGK2 Catalytic do 95.5 0.011 2.4E-07 57.2 3.5 73 383-476 170-242 (321)
363 cd07872 STKc_PCTAIRE2 Catalyti 95.5 0.006 1.3E-07 58.7 1.6 26 385-410 181-206 (309)
364 PTZ00263 protein kinase A cata 95.5 0.013 2.9E-07 56.8 4.0 76 383-479 189-269 (329)
365 cd07845 STKc_CDK10 Catalytic d 95.5 0.0084 1.8E-07 57.6 2.4 25 386-410 186-210 (309)
366 cd07871 STKc_PCTAIRE3 Catalyti 95.5 0.0058 1.3E-07 58.1 1.3 26 385-410 180-205 (288)
367 cd05593 STKc_PKB_gamma Catalyt 95.5 0.017 3.6E-07 56.2 4.5 77 383-480 169-250 (328)
368 cd05628 STKc_NDR1 Catalytic do 95.5 0.02 4.4E-07 56.5 5.1 28 383-410 210-237 (363)
369 cd05586 STKc_Sck1_like Catalyt 95.5 0.0065 1.4E-07 59.1 1.6 73 386-478 174-246 (330)
370 cd07878 STKc_p38beta_MAPK11 Ca 95.5 0.0056 1.2E-07 59.9 1.1 26 385-410 192-217 (343)
371 cd05626 STKc_LATS2 Catalytic d 95.4 0.027 5.8E-07 56.0 5.9 27 384-410 223-249 (381)
372 cd07854 STKc_MAPK4_6 Catalytic 95.4 0.0072 1.6E-07 59.1 1.8 25 386-410 196-220 (342)
373 cd05587 STKc_cPKC Catalytic do 95.4 0.0078 1.7E-07 58.4 1.8 71 384-475 176-246 (324)
374 cd05595 STKc_PKB_beta Catalyti 95.4 0.015 3.3E-07 56.3 3.8 76 383-479 169-249 (323)
375 cd05620 STKc_nPKC_delta Cataly 95.4 0.0096 2.1E-07 57.5 2.4 74 383-477 170-243 (316)
376 PTZ00036 glycogen synthase kin 95.3 0.0092 2E-07 60.6 2.2 91 385-479 247-349 (440)
377 cd05594 STKc_PKB_alpha Catalyt 95.3 0.015 3.3E-07 56.4 3.6 76 383-479 170-250 (325)
378 cd05577 STKc_GRK Catalytic dom 95.2 0.012 2.6E-07 55.5 2.5 83 383-482 168-251 (277)
379 cd07880 STKc_p38gamma_MAPK12 C 95.2 0.0058 1.2E-07 59.8 0.3 26 385-410 192-217 (343)
380 cd05123 STKc_AGC Catalytic dom 95.1 0.016 3.5E-07 53.5 3.1 73 384-477 168-240 (250)
381 cd05597 STKc_DMPK_like Catalyt 95.1 0.036 7.9E-07 53.9 5.6 81 385-480 184-265 (331)
382 cd05623 STKc_MRCK_alpha Cataly 95.0 0.048 1E-06 53.0 6.1 82 385-480 184-265 (332)
383 cd05581 STKc_PDK1 Catalytic do 95.0 0.014 3.1E-07 54.8 2.3 76 383-479 196-275 (280)
384 KOG4308 LRR-containing protein 94.9 0.00024 5.1E-09 71.7 -10.5 37 105-141 89-128 (478)
385 KOG0983 Mitogen-activated prot 94.9 0.028 6.1E-07 51.1 3.7 78 385-479 270-347 (391)
386 cd05615 STKc_cPKC_alpha Cataly 94.7 0.024 5.3E-07 54.9 3.2 73 383-476 175-247 (323)
387 PF00560 LRR_1: Leucine Rich R 94.6 0.014 3.1E-07 31.2 0.7 12 81-92 2-13 (22)
388 PHA03211 serine/threonine kina 94.4 0.028 6.1E-07 57.2 3.0 28 382-409 335-362 (461)
389 cd05622 STKc_ROCK1 Catalytic d 94.4 0.052 1.1E-06 53.7 4.7 26 385-410 223-248 (371)
390 PTZ00426 cAMP-dependent protei 94.4 0.044 9.5E-07 53.5 4.1 75 384-479 203-282 (340)
391 cd05576 STKc_RPK118_like Catal 94.3 0.016 3.5E-07 53.3 0.9 70 384-478 157-226 (237)
392 PHA03210 serine/threonine kina 94.3 0.023 5E-07 58.7 2.2 26 383-408 342-367 (501)
393 cd05598 STKc_LATS Catalytic do 94.3 0.039 8.4E-07 54.7 3.7 28 383-410 218-245 (376)
394 cd05621 STKc_ROCK2 Catalytic d 94.3 0.067 1.4E-06 53.0 5.2 26 385-410 223-248 (370)
395 KOG0578 p21-activated serine/t 94.2 0.044 9.6E-07 54.8 3.7 78 384-480 444-522 (550)
396 KOG4279 Serine/threonine prote 94.1 0.03 6.5E-07 57.4 2.3 74 388-480 757-831 (1226)
397 KOG0671 LAMMER dual specificit 94.1 0.029 6.3E-07 53.4 2.1 37 372-408 272-308 (415)
398 cd05599 STKc_NDR_like Catalyti 94.1 0.06 1.3E-06 53.1 4.5 29 382-410 212-240 (364)
399 cd05613 STKc_MSK1_N N-terminal 94.0 0.05 1.1E-06 51.6 3.7 71 386-473 185-255 (290)
400 cd06653 STKc_MEKK3_like_1 Cata 94.0 0.061 1.3E-06 50.2 4.2 28 383-410 183-210 (264)
401 cd07877 STKc_p38alpha_MAPK14 C 94.0 0.03 6.4E-07 54.9 2.1 25 385-409 194-218 (345)
402 KOG0591 NIMA (never in mitosis 93.9 0.065 1.4E-06 49.1 3.7 77 386-481 205-281 (375)
403 KOG0201 Serine/threonine prote 93.8 0.062 1.4E-06 52.1 3.8 70 386-479 188-261 (467)
404 KOG1989 ARK protein kinase fam 93.5 0.11 2.3E-06 54.8 5.1 82 383-487 232-313 (738)
405 cd05627 STKc_NDR2 Catalytic do 93.5 0.091 2E-06 51.7 4.5 28 383-410 210-237 (360)
406 cd05624 STKc_MRCK_beta Catalyt 93.4 0.17 3.7E-06 49.2 6.2 26 385-410 184-209 (331)
407 cd05580 STKc_PKA Catalytic dom 93.2 0.085 1.8E-06 50.1 3.7 69 384-473 173-241 (290)
408 cd05629 STKc_NDR_like_fungal C 93.2 0.14 3.1E-06 50.7 5.4 29 382-410 221-249 (377)
409 KOG0583 Serine/threonine prote 93.0 0.11 2.4E-06 51.1 4.2 73 387-479 201-273 (370)
410 KOG4645 MAPKKK (MAP kinase kin 92.9 0.072 1.6E-06 58.7 2.9 23 389-411 1421-1443(1509)
411 cd05625 STKc_LATS1 Catalytic d 92.8 0.12 2.7E-06 51.2 4.4 28 383-410 222-249 (382)
412 KOG0195 Integrin-linked kinase 92.6 0.07 1.5E-06 48.5 2.0 80 388-486 368-447 (448)
413 KOG0584 Serine/threonine prote 92.4 0.035 7.6E-07 56.2 -0.2 72 386-480 220-295 (632)
414 KOG0588 Serine/threonine prote 91.9 0.22 4.7E-06 51.1 4.7 33 388-425 191-223 (786)
415 KOG1006 Mitogen-activated prot 90.8 0.096 2.1E-06 47.6 0.8 79 386-478 246-324 (361)
416 cd00180 PKc Catalytic domain o 90.7 0.11 2.4E-06 45.9 1.2 25 457-481 190-214 (215)
417 KOG0667 Dual-specificity tyros 90.6 0.13 2.8E-06 52.4 1.6 83 319-406 301-385 (586)
418 PF13504 LRR_7: Leucine rich r 90.5 0.17 3.6E-06 25.1 1.2 12 80-91 2-13 (17)
419 KOG4257 Focal adhesion tyrosin 90.4 0.26 5.6E-06 50.3 3.5 88 379-486 562-650 (974)
420 KOG3864 Uncharacterized conser 89.5 0.037 8E-07 48.1 -2.8 33 297-329 151-184 (221)
421 KOG0579 Ste20-like serine/thre 87.9 0.51 1.1E-05 48.3 3.5 74 387-479 213-287 (1187)
422 KOG3864 Uncharacterized conser 87.8 0.12 2.6E-06 45.1 -0.8 83 56-161 102-185 (221)
423 KOG0473 Leucine-rich repeat pr 87.6 0.014 3.1E-07 51.7 -6.6 61 127-189 64-124 (326)
424 KOG0575 Polo-like serine/threo 87.0 0.43 9.3E-06 48.4 2.4 24 387-410 196-219 (592)
425 KOG0589 Serine/threonine prote 86.7 0.73 1.6E-05 45.6 3.8 76 386-481 183-258 (426)
426 KOG0615 Serine/threonine prote 85.9 0.77 1.7E-05 44.6 3.4 76 388-480 360-436 (475)
427 PLN03224 probable serine/threo 85.8 1.1 2.4E-05 46.0 4.8 21 387-407 410-430 (507)
428 KOG1035 eIF-2alpha kinase GCN2 85.7 0.64 1.4E-05 51.2 3.1 74 385-480 794-870 (1351)
429 KOG0593 Predicted protein kina 83.0 0.55 1.2E-05 43.7 1.1 90 386-479 179-282 (396)
430 smart00369 LRR_TYP Leucine-ric 81.8 1.2 2.6E-05 24.7 1.8 14 79-92 2-15 (26)
431 smart00370 LRR Leucine-rich re 81.8 1.2 2.6E-05 24.7 1.8 14 79-92 2-15 (26)
432 smart00221 STYKc Protein kinas 81.5 0.53 1.1E-05 42.2 0.4 27 385-411 176-202 (225)
433 KOG1290 Serine/threonine prote 81.5 1 2.3E-05 44.7 2.4 108 373-480 415-549 (590)
434 PF13516 LRR_6: Leucine Rich r 81.4 0.58 1.3E-05 25.4 0.4 10 105-114 4-13 (24)
435 KOG0580 Serine/threonine prote 81.4 1.2 2.5E-05 40.2 2.4 75 385-480 198-272 (281)
436 KOG0984 Mitogen-activated prot 81.2 0.53 1.1E-05 41.4 0.2 27 386-412 229-255 (282)
437 KOG0473 Leucine-rich repeat pr 80.0 0.13 2.9E-06 45.7 -3.8 87 220-310 38-124 (326)
438 KOG4242 Predicted myosin-I-bin 76.8 11 0.00024 37.6 7.6 108 249-356 355-479 (553)
439 KOG1345 Serine/threonine kinas 74.6 1.6 3.6E-05 40.1 1.4 38 386-423 202-239 (378)
440 KOG0661 MAPK related serine/th 72.4 2.9 6.3E-05 41.5 2.6 94 383-480 184-290 (538)
441 KOG4242 Predicted myosin-I-bin 69.4 15 0.00034 36.6 6.7 85 274-358 355-453 (553)
442 smart00365 LRR_SD22 Leucine-ri 68.7 4.6 0.0001 22.6 1.8 14 79-92 2-15 (26)
443 KOG0577 Serine/threonine prote 68.4 6.2 0.00014 40.5 4.0 77 384-479 200-276 (948)
444 KOG0598 Ribosomal protein S6 k 68.2 3.8 8.1E-05 39.3 2.3 47 379-430 195-241 (357)
445 KOG0658 Glycogen synthase kina 67.5 6.7 0.00014 37.6 3.8 99 376-479 192-304 (364)
446 KOG0595 Serine/threonine-prote 66.3 1.8 3.8E-05 42.1 -0.2 32 379-410 184-215 (429)
447 KOG1266 Protein kinase [Signal 65.7 9.4 0.0002 36.4 4.3 33 375-407 248-280 (458)
448 KOG4717 Serine/threonine prote 63.7 5 0.00011 40.4 2.2 25 388-412 198-222 (864)
449 KOG0660 Mitogen-activated prot 63.2 3.9 8.4E-05 39.1 1.4 23 386-408 205-227 (359)
450 KOG0668 Casein kinase II, alph 61.8 4.9 0.00011 36.1 1.7 34 390-426 214-247 (338)
451 KOG0592 3-phosphoinositide-dep 61.8 5 0.00011 40.6 1.9 31 379-409 257-287 (604)
452 KOG0696 Serine/threonine prote 61.6 3.3 7.1E-05 40.4 0.6 24 388-411 529-552 (683)
453 KOG4250 TANK binding protein k 61.3 15 0.00033 38.5 5.3 100 384-486 199-311 (732)
454 KOG0032 Ca2+/calmodulin-depend 61.2 13 0.00029 36.7 4.8 26 384-409 213-238 (382)
455 KOG0600 Cdc2-related protein k 59.7 5.3 0.00012 40.1 1.7 25 385-409 296-320 (560)
456 KOG0594 Protein kinase PCTAIRE 59.4 4.5 9.8E-05 38.4 1.1 92 386-481 198-302 (323)
457 smart00368 LRR_RI Leucine rich 58.7 8.4 0.00018 21.8 1.8 13 80-92 3-15 (28)
458 KOG3763 mRNA export factor TAP 55.1 8.9 0.00019 39.0 2.4 81 77-158 216-307 (585)
459 KOG2052 Activin A type IB rece 54.9 7.6 0.00016 38.4 1.8 96 388-486 405-504 (513)
460 KOG0663 Protein kinase PITSLRE 54.3 7.6 0.00016 37.0 1.7 24 385-408 254-277 (419)
461 KOG3763 mRNA export factor TAP 54.1 7.9 0.00017 39.3 1.9 62 198-261 216-283 (585)
462 smart00364 LRR_BAC Leucine-ric 53.2 9.9 0.00021 21.2 1.4 13 80-92 3-15 (26)
463 KOG0694 Serine/threonine prote 53.1 6.1 0.00013 41.1 1.0 32 378-409 537-568 (694)
464 KOG0665 Jun-N-terminal kinase 52.5 6.1 0.00013 37.3 0.7 36 386-425 194-229 (369)
465 KOG1151 Tousled-like protein k 47.8 16 0.00035 36.2 2.8 26 384-409 659-684 (775)
466 KOG0033 Ca2+/calmodulin-depend 47.6 7.9 0.00017 35.2 0.6 27 383-409 186-212 (355)
467 KOG0574 STE20-like serine/thre 44.2 23 0.0005 33.2 3.1 73 388-479 208-281 (502)
468 KOG0597 Serine-threonine prote 41.3 9.9 0.00022 38.9 0.4 41 383-428 174-214 (808)
469 KOG0604 MAP kinase-activated p 39.0 33 0.00072 32.4 3.3 83 383-479 237-320 (400)
470 smart00367 LRR_CC Leucine-rich 36.6 26 0.00056 19.2 1.4 11 79-89 2-12 (26)
471 KOG0659 Cdk activating kinase 34.0 42 0.00091 31.1 3.1 35 386-424 179-213 (318)
472 KOG1027 Serine/threonine prote 32.4 61 0.0013 35.1 4.3 27 383-409 688-715 (903)
473 KOG0611 Predicted serine/threo 31.5 58 0.0013 32.1 3.7 24 388-411 232-255 (668)
474 KOG1167 Serine/threonine prote 31.4 34 0.00073 33.6 2.2 26 385-410 254-279 (418)
475 KOG0610 Putative serine/threon 29.4 23 0.0005 34.8 0.7 23 387-409 313-335 (459)
476 KOG0605 NDR and related serine 28.0 38 0.00081 34.5 1.9 24 386-409 365-388 (550)
477 KOG0587 Traf2- and Nck-interac 27.3 44 0.00096 36.3 2.4 77 385-479 204-280 (953)
478 KOG0695 Serine/threonine prote 26.5 24 0.00053 33.5 0.3 37 389-425 431-469 (593)
479 KOG0590 Checkpoint kinase and 26.2 38 0.00083 35.8 1.8 26 387-412 503-528 (601)
480 KOG0616 cAMP-dependent protein 25.5 23 0.0005 33.3 -0.0 22 388-409 220-241 (355)
481 KOG0614 cGMP-dependent protein 24.6 32 0.00069 35.0 0.7 22 388-409 598-619 (732)
482 KOG0599 Phosphorylase kinase g 24.5 60 0.0013 30.3 2.4 24 386-409 205-228 (411)
483 KOG1665 AFH1-interacting prote 23.3 1.2E+02 0.0027 27.1 4.0 12 177-188 217-228 (302)
484 PF05953 Allatostatin: Allatos 23.2 35 0.00076 14.8 0.3 8 390-397 3-10 (11)
485 KOG0986 G protein-coupled rece 20.8 40 0.00086 33.8 0.6 32 379-410 356-387 (591)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.5e-51 Score=454.44 Aligned_cols=324 Identities=42% Similarity=0.709 Sum_probs=219.9
Q ss_pred ChHHHHHHHHHHhhCCCCCCccccCCCCCCCCCCccceeeeCCCCCCeEEEEcCCCCCcccCchhccCCCCCCEEeCcCC
Q 011044 10 ITTDQQALLVLKAHVTDDPTNFLAKNWNTSSSFCYWTGVTCDVRSHRVAALNISGLNLTGTIPSELANLSSLQALDLSFN 89 (495)
Q Consensus 10 ~~~~~~~ll~~~~~~~~~~~~~l~~~w~~~~~~c~w~gv~c~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n 89 (495)
.++|+.||++||+.+ .+|.+.+. +|+...++|.|.|++|+. ..+|+.|+|+++.+++.++..+..+++|++|+|++|
T Consensus 27 ~~~~~~~l~~~~~~~-~~~~~~~~-~w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n 103 (968)
T PLN00113 27 HAEELELLLSFKSSI-NDPLKYLS-NWNSSADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNN 103 (968)
T ss_pred CHHHHHHHHHHHHhC-CCCcccCC-CCCCCCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCC
Confidence 557899999999999 57877776 998878999999999985 468999999999999999999999999999999999
Q ss_pred cCCccCCcccc-CCCCCcEEEccCCcccccCChhHhhcCCCCCEEEcccccCCccCCcccCCCCCCCEEEcccCcCcccc
Q 011044 90 WFYGSIPSSIF-NMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLFLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTI 168 (495)
Q Consensus 90 ~l~~~~~~~l~-~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~ 168 (495)
.+.+.+|..+. ++++|++|++++|.+.+.+|.. .+++|++|++++|.+.+.+|..++++++|++|++++|.+.+.+
T Consensus 104 ~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~---~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 180 (968)
T PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRG---SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKI 180 (968)
T ss_pred ccCCcCChHHhccCCCCCEEECcCCccccccCcc---ccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccC
Confidence 99988887655 7888888888888777666642 2556666666666665555555666666666666666555555
Q ss_pred CccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCCCcCchhhhcCCCCceeeCCCCcCCCCCCccccccc
Q 011044 169 PKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLTGTIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLS 248 (495)
Q Consensus 169 ~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~ 248 (495)
|..++++++|++|++++|.+.+.+|..++++++|+.|++++|.+.+.+|..+.++++|++|++++|.+.+..|..++.++
T Consensus 181 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 260 (968)
T PLN00113 181 PNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLK 260 (968)
T ss_pred ChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCC
Confidence 55555555566666555555555555555555555555555555555555555555555555555555544444444444
Q ss_pred cc------------------------ceeeccCcccccccchhhhhCCccccccccccceeeecccccccCCCCCCeeec
Q 011044 249 SL------------------------QKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSGAIPKEIGNLTKLTDLYL 304 (495)
Q Consensus 249 ~L------------------------~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 304 (495)
+| +.|++++|.+.+.+|..+. .+++|+.|++++|.+.+..|..+..+++|+.|++
T Consensus 261 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L 339 (968)
T PLN00113 261 NLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVI-QLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQL 339 (968)
T ss_pred CCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHc-CCCCCcEEECCCCccCCcCChhHhcCCCCCEEEC
Confidence 44 4445544444444444333 4555555555555555555555666666666666
Q ss_pred ccccccccCCccccCCCcCCEEeCcCCcccccCCcC
Q 011044 305 DQNKLQGKIPHEIGNLRKLEWLMLSHNKLVGVVPAP 340 (495)
Q Consensus 305 ~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 340 (495)
++|.+.+.+|..++.+++|+.|++++|++.+.+|..
T Consensus 340 ~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~ 375 (968)
T PLN00113 340 WSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEG 375 (968)
T ss_pred cCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChh
Confidence 666666666666777777777777777776666543
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.2e-36 Score=337.42 Aligned_cols=304 Identities=37% Similarity=0.590 Sum_probs=214.6
Q ss_pred CCCeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEE
Q 011044 54 SHRVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESL 133 (495)
Q Consensus 54 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L 133 (495)
.+++++|+|++|.+++.+|..++++++|++|++++|.+.+.+|..+.++++|++|++++|.+.+.+|..+.. +++|++|
T Consensus 139 l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L 217 (968)
T PLN00113 139 IPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQ-MKSLKWI 217 (968)
T ss_pred cCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcC-cCCccEE
Confidence 356777777777777777777888888888888888877777777788888888888888877777777665 7788888
Q ss_pred EcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCC
Q 011044 134 FLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLT 213 (495)
Q Consensus 134 ~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 213 (495)
++++|.+.+.+|..++++++|++|++++|.+.+.+|..++++++|++|++++|.+.+.+|..+.++++|+.|++++|.+.
T Consensus 218 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 297 (968)
T PLN00113 218 YLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLS 297 (968)
T ss_pred ECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeec
Confidence 88888777777777777788888888887777777777777777778877777777777777777777777777777777
Q ss_pred CcCchhhhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCccccccccccceeeecccccc
Q 011044 214 GTIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSGAIPKEI 293 (495)
Q Consensus 214 ~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l 293 (495)
+.+|..+.++++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+.+|..+. .+++|+.|++++|.+.+.+|..+
T Consensus 298 ~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~-~~~~L~~L~Ls~n~l~~~~p~~~ 376 (968)
T PLN00113 298 GEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLG-KHNNLTVLDLSTNNLTGEIPEGL 376 (968)
T ss_pred cCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHh-CCCCCcEEECCCCeeEeeCChhH
Confidence 77777777777777777777777777777677777777777777777766666555 56677777777776666666555
Q ss_pred cCCCCCCeeecccccccccCCccccCCCcCCEEeCcCCcccccCCcCccCCCCCcEEEccCCcCce
Q 011044 294 GNLTKLTDLYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLVGVVPAPIFNLSTLISLQLHNNSLSG 359 (495)
Q Consensus 294 ~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 359 (495)
..+++|+.|++++|.+.+.+|..+..+++|+.|++++|++.+..|..+..+++|+.|++++|.+.+
T Consensus 377 ~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 442 (968)
T PLN00113 377 CSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQG 442 (968)
T ss_pred hCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccC
Confidence 555555555555555555555555555555555555555555445444444444444444444443
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.97 E-value=8.1e-33 Score=264.92 Aligned_cols=326 Identities=23% Similarity=0.232 Sum_probs=240.6
Q ss_pred CCCeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEE
Q 011044 54 SHRVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESL 133 (495)
Q Consensus 54 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L 133 (495)
+...+.|++++|.+...-+..|.++++|+++++..|.++ .+|.......+|+.|+|.+|.|+..-...+.. ++.|+.|
T Consensus 77 p~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~-l~alrsl 154 (873)
T KOG4194|consen 77 PSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSA-LPALRSL 154 (873)
T ss_pred ccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHh-Hhhhhhh
Confidence 456788999999999888888999999999999999997 78876666778999999999997555555555 8999999
Q ss_pred EcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCC
Q 011044 134 FLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLT 213 (495)
Q Consensus 134 ~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 213 (495)
||+.|.++..-...|..-.++++|+|++|.|+..-...|..+.+|..|.|+.|+++...+..|++++.|+.|+|..|.+.
T Consensus 155 DLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~ir 234 (873)
T KOG4194|consen 155 DLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIR 234 (873)
T ss_pred hhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhcccccee
Confidence 99999988555556777788999999999998777788888889999999999998776778888999999999998886
Q ss_pred CcCchhhhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCccccccccccceeeecccccc
Q 011044 214 GTIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSGAIPKEI 293 (495)
Q Consensus 214 ~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l 293 (495)
-.--..|.++++|+.|.+..|.+.......|..+.++++|+++.|+++..-..+++ ++..|+.|++++|.+...-++..
T Consensus 235 ive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lf-gLt~L~~L~lS~NaI~rih~d~W 313 (873)
T KOG4194|consen 235 IVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLF-GLTSLEQLDLSYNAIQRIHIDSW 313 (873)
T ss_pred eehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhccccc-ccchhhhhccchhhhheeecchh
Confidence 33345667778888888888877766666677777777777777777643334444 66677777777776665555555
Q ss_pred cCCCCCCeeecccccccccCCcc------------------------ccCCCcCCEEeCcCCcccccC---CcCccCCCC
Q 011044 294 GNLTKLTDLYLDQNKLQGKIPHE------------------------IGNLRKLEWLMLSHNKLVGVV---PAPIFNLST 346 (495)
Q Consensus 294 ~~l~~L~~L~L~~n~i~~~~~~~------------------------l~~l~~L~~L~l~~n~l~~~~---~~~~~~l~~ 346 (495)
.-.++|++|+|++|+|+..-+.. |..+++|+.|+|++|.+...+ ...|.++++
T Consensus 314 sftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~ 393 (873)
T KOG4194|consen 314 SFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPS 393 (873)
T ss_pred hhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchh
Confidence 66666666666666666444444 444555555555555544322 223455666
Q ss_pred CcEEEccCCcCceecCCCCCCCCCChhhhhhhhcCCC
Q 011044 347 LISLQLHNNSLSGSLPSSADVPLPNLEELFLWEYGRE 383 (495)
Q Consensus 347 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~~~~~ 383 (495)
|+.|.+.+|++. .+|...+..++.|+.|++.+|+..
T Consensus 394 LrkL~l~gNqlk-~I~krAfsgl~~LE~LdL~~Naia 429 (873)
T KOG4194|consen 394 LRKLRLTGNQLK-SIPKRAFSGLEALEHLDLGDNAIA 429 (873)
T ss_pred hhheeecCceee-ecchhhhccCcccceecCCCCcce
Confidence 666666666665 666666666777777777766654
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-33 Score=266.95 Aligned_cols=319 Identities=24% Similarity=0.271 Sum_probs=254.9
Q ss_pred CCeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEE
Q 011044 55 HRVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLF 134 (495)
Q Consensus 55 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~ 134 (495)
+++++|+|.+|.|+..-...+..++.||+|||+.|.|+..--..|..-.++++|+|++|.|+. +..+-+..+.+|.+|.
T Consensus 125 ghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~-l~~~~F~~lnsL~tlk 203 (873)
T KOG4194|consen 125 GHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITT-LETGHFDSLNSLLTLK 203 (873)
T ss_pred cceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccc-cccccccccchheeee
Confidence 467777777777776666677777778888888777774444556666778888888887753 3333334477788888
Q ss_pred cccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCCC
Q 011044 135 LKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLTG 214 (495)
Q Consensus 135 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 214 (495)
|+.|+++...+..|+++++|+.|+|..|.+.-.---.|.++++|+.|.|..|.+...-...|..+.+++.|+|+.|++..
T Consensus 204 LsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~ 283 (873)
T KOG4194|consen 204 LSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQA 283 (873)
T ss_pred cccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhh
Confidence 88888875555677778888888888887763334457778888888888888776666678888899999999999987
Q ss_pred cCchhhhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCccccccccccceeeeccccccc
Q 011044 215 TIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSGAIPKEIG 294 (495)
Q Consensus 215 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 294 (495)
.-..++.+++.|+.|++|.|.|..+.++.++.+++|++|++++|+++ .++..-+..+..|+.|+|++|.++..--..|.
T Consensus 284 vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~-~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~ 362 (873)
T KOG4194|consen 284 VNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRIT-RLDEGSFRVLSQLEELNLSHNSIDHLAEGAFV 362 (873)
T ss_pred hhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccc-cCChhHHHHHHHhhhhcccccchHHHHhhHHH
Confidence 77788999999999999999999999999999999999999999999 56655555889999999999999876667789
Q ss_pred CCCCCCeeecccccccccCC---ccccCCCcCCEEeCcCCcccccCCcCccCCCCCcEEEccCCcCceecCCCCCCCCCC
Q 011044 295 NLTKLTDLYLDQNKLQGKIP---HEIGNLRKLEWLMLSHNKLVGVVPAPIFNLSTLISLQLHNNSLSGSLPSSADVPLPN 371 (495)
Q Consensus 295 ~l~~L~~L~L~~n~i~~~~~---~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 371 (495)
.+.+|++|||++|.+...+. ..|..+++|+.|.+.+|++..+....|.++++|++|+|.+|.|. .+....+.++ .
T Consensus 363 ~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Naia-SIq~nAFe~m-~ 440 (873)
T KOG4194|consen 363 GLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIA-SIQPNAFEPM-E 440 (873)
T ss_pred HhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcce-eecccccccc-h
Confidence 99999999999999876433 45778999999999999999888889999999999999999998 5555555555 7
Q ss_pred hhhhhh
Q 011044 372 LEELFL 377 (495)
Q Consensus 372 L~~L~l 377 (495)
|++|.+
T Consensus 441 Lk~Lv~ 446 (873)
T KOG4194|consen 441 LKELVM 446 (873)
T ss_pred hhhhhh
Confidence 777755
No 5
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=3.4e-31 Score=255.64 Aligned_cols=317 Identities=33% Similarity=0.464 Sum_probs=175.1
Q ss_pred CCeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCcc-CCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEE
Q 011044 55 HRVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGS-IPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESL 133 (495)
Q Consensus 55 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L 133 (495)
.++.+|++++|+++ .+...++.+|.||.+.++.|++... +|..+..+..|.+|+|++|++ .+.|.++.. .+++-.|
T Consensus 55 qkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL-~EvP~~LE~-AKn~iVL 131 (1255)
T KOG0444|consen 55 QKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQL-REVPTNLEY-AKNSIVL 131 (1255)
T ss_pred hhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhh-hhcchhhhh-hcCcEEE
Confidence 35566666666665 2234455566666666666655432 555666666666666666665 355655554 5666666
Q ss_pred EcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCC
Q 011044 134 FLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLT 213 (495)
Q Consensus 134 ~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 213 (495)
+|++|+|.......+-+++.|-+|+|++|.+. .+|..+..+.+|++|.|++|.+.-.-...+..+++|+.|.+++.+-+
T Consensus 132 NLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRT 210 (1255)
T KOG0444|consen 132 NLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRT 210 (1255)
T ss_pred EcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccch
Confidence 66666665322223445666666666666665 45555666666666666666543211122223344444555544322
Q ss_pred -CcCchhhhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCccccccccccceeeeccccc
Q 011044 214 -GTIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSGAIPKE 292 (495)
Q Consensus 214 -~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 292 (495)
..+|..+..+.+|..+++|.|.+. .+|..+..+++|+.|++++|.++ .+..... ...+|++|+++.|+++ .+|..
T Consensus 211 l~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~-~W~~lEtLNlSrNQLt-~LP~a 286 (1255)
T KOG0444|consen 211 LDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEG-EWENLETLNLSRNQLT-VLPDA 286 (1255)
T ss_pred hhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHH-HHhhhhhhccccchhc-cchHH
Confidence 234555555556666666665554 44555555566666666666555 3333333 3445566666666655 55555
Q ss_pred ccCCCCCCeeecccccccc-cCCccccCCCcCCEEeCcCCcccccCCcCccCCCCCcEEEccCCcCceecCCCCCCCCCC
Q 011044 293 IGNLTKLTDLYLDQNKLQG-KIPHEIGNLRKLEWLMLSHNKLVGVVPAPIFNLSTLISLQLHNNSLSGSLPSSADVPLPN 371 (495)
Q Consensus 293 l~~l~~L~~L~L~~n~i~~-~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 371 (495)
+..+++|+.|.+.+|+++- .+|+.++.+..|+.+..++|.+. .+|..++.|..|+.|.++.|.+. .+|..+. -+|.
T Consensus 287 vcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIH-lL~~ 363 (1255)
T KOG0444|consen 287 VCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIH-LLPD 363 (1255)
T ss_pred HhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhh-hcCC
Confidence 6666666666666665442 35555666666666666655554 45556666666666666666654 4454443 3555
Q ss_pred hhhhhhhhcCC
Q 011044 372 LEELFLWEYGR 382 (495)
Q Consensus 372 L~~L~l~~~~~ 382 (495)
|+.|++.+|+.
T Consensus 364 l~vLDlreNpn 374 (1255)
T KOG0444|consen 364 LKVLDLRENPN 374 (1255)
T ss_pred cceeeccCCcC
Confidence 66666655554
No 6
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.95 E-value=1.3e-30 Score=251.70 Aligned_cols=296 Identities=28% Similarity=0.424 Sum_probs=264.6
Q ss_pred CCCeEEEEcCCCCCccc-CchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCE
Q 011044 54 SHRVAALNISGLNLTGT-IPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLES 132 (495)
Q Consensus 54 ~~~l~~L~L~~~~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~ 132 (495)
-+++++++++.|++... +|+.+-.+..|.+|+|++|+++ ..|..+...+++-+|+|++|+| ..||..++.++..|-.
T Consensus 77 Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~I-etIPn~lfinLtDLLf 154 (1255)
T KOG0444|consen 77 LPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNI-ETIPNSLFINLTDLLF 154 (1255)
T ss_pred chhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCcc-ccCCchHHHhhHhHhh
Confidence 36788999999988654 7788999999999999999998 8999999999999999999999 7999999988999999
Q ss_pred EEcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCC-CCCChhhhCcccccEEEecCCc
Q 011044 133 LFLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQ-GEIPEELGNLAELEMLWLQNNS 211 (495)
Q Consensus 133 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~-~~~~~~l~~l~~L~~L~l~~n~ 211 (495)
|+|++|++. .+|..+..+.+|++|.|++|.+.-.....+..+++|+.|.+++.+-+ ..+|.++..+.+|..++++.|.
T Consensus 155 LDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~ 233 (1255)
T KOG0444|consen 155 LDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENN 233 (1255)
T ss_pred hccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccC
Confidence 999999998 78888999999999999999887544455666788889999987643 4689999999999999999999
Q ss_pred CCCcCchhhhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCccccccccccceee-eccc
Q 011044 212 LTGTIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFS-GAIP 290 (495)
Q Consensus 212 l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~ 290 (495)
+. ..|..+.++++|+.|+||+|.++.. ....+...+|++|+++.|+++ .+|..+. .++.|+.|.+.+|+++ ..+|
T Consensus 234 Lp-~vPecly~l~~LrrLNLS~N~iteL-~~~~~~W~~lEtLNlSrNQLt-~LP~avc-KL~kL~kLy~n~NkL~FeGiP 309 (1255)
T KOG0444|consen 234 LP-IVPECLYKLRNLRRLNLSGNKITEL-NMTEGEWENLETLNLSRNQLT-VLPDAVC-KLTKLTKLYANNNKLTFEGIP 309 (1255)
T ss_pred CC-cchHHHhhhhhhheeccCcCceeee-eccHHHHhhhhhhccccchhc-cchHHHh-hhHHHHHHHhccCcccccCCc
Confidence 98 7899999999999999999999854 334567789999999999999 8999988 8999999999999875 3678
Q ss_pred ccccCCCCCCeeecccccccccCCccccCCCcCCEEeCcCCcccccCCcCccCCCCCcEEEccCCcCc
Q 011044 291 KEIGNLTKLTDLYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLVGVVPAPIFNLSTLISLQLHNNSLS 358 (495)
Q Consensus 291 ~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 358 (495)
..++.+.+|+.+..++|.+. .+|..+..|..|+.|.|++|++. .+|..+.-++.|+.||+..|+-.
T Consensus 310 SGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 310 SGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred cchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCc
Confidence 89999999999999999987 89999999999999999999987 58999999999999999999865
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.92 E-value=4.1e-28 Score=223.27 Aligned_cols=93 Identities=35% Similarity=0.484 Sum_probs=67.8
Q ss_pred cccccccCCCCCCeeecccccccccCCccccCCCcCCEEeCcCCccc-----------------------ccCCcCccCC
Q 011044 288 AIPKEIGNLTKLTDLYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLV-----------------------GVVPAPIFNL 344 (495)
Q Consensus 288 ~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~-----------------------~~~~~~~~~l 344 (495)
..|..++.+++|..|++++|.+. .+|..++.+..|+.|++++|++. ...+..+.++
T Consensus 426 fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm 504 (565)
T KOG0472|consen 426 FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKNM 504 (565)
T ss_pred cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccccchHHHhhHHHHHHHHhccccccccChHHhhhh
Confidence 44555667777777777777665 56777777777777777766543 2334447788
Q ss_pred CCCcEEEccCCcCceecCCCCCCCCCChhhhhhhhcCCC
Q 011044 345 STLISLQLHNNSLSGSLPSSADVPLPNLEELFLWEYGRE 383 (495)
Q Consensus 345 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~~~~~ 383 (495)
.+|..||+.+|.+. .+|.... .+.+|++|.+++|++.
T Consensus 505 ~nL~tLDL~nNdlq-~IPp~Lg-nmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 505 RNLTTLDLQNNDLQ-QIPPILG-NMTNLRHLELDGNPFR 541 (565)
T ss_pred hhcceeccCCCchh-hCChhhc-cccceeEEEecCCccC
Confidence 88999999999987 6676655 5889999999988865
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.92 E-value=2.1e-27 Score=218.61 Aligned_cols=292 Identities=29% Similarity=0.440 Sum_probs=207.2
Q ss_pred CCeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEE
Q 011044 55 HRVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLF 134 (495)
Q Consensus 55 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~ 134 (495)
.++++||...|-++ .+|+.++.+.+|.-|+|+.|++. .+| .|.+|..|+.|+++.|.+ ..+|...+.+++++.+|+
T Consensus 183 ~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i-~~lpae~~~~L~~l~vLD 258 (565)
T KOG0472|consen 183 KRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQI-EMLPAEHLKHLNSLLVLD 258 (565)
T ss_pred HHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHH-HhhHHHHhcccccceeee
Confidence 35566666666554 67777888888888888888876 556 677788888888877777 577777777788888888
Q ss_pred cccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCC------------------------
Q 011044 135 LKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQG------------------------ 190 (495)
Q Consensus 135 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~------------------------ 190 (495)
+..|+++ ..|..+..+.+|..||+++|.++ .+|..++++ +|+.|.+.+|.+..
T Consensus 259 LRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~d 335 (565)
T KOG0472|consen 259 LRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDD 335 (565)
T ss_pred ccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccC
Confidence 8888887 67777777888888888888887 567777777 78888777776421
Q ss_pred -------------C-CC---hhhhCcccccEEEecCCcCCCcCchhhhcCCC---CceeeCCCCcC--------------
Q 011044 191 -------------E-IP---EELGNLAELEMLWLQNNSLTGTIPSSIFSLSS---LLNLDLSLNNF-------------- 236 (495)
Q Consensus 191 -------------~-~~---~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~---L~~L~Ls~n~l-------------- 236 (495)
. .+ .....+.+.+.|++++-+++ .+|...+.... .+.++++.|++
T Consensus 336 glS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelv 414 (565)
T KOG0472|consen 336 GLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELV 414 (565)
T ss_pred CCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHH
Confidence 0 00 00111223444444444443 23333222221 33444444433
Q ss_pred ---------CCCCCcccccccccceeeccCcccccccchhhhhCCccccccccccceeeecccccccCCCCCCeeecccc
Q 011044 237 ---------TGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSGAIPKEIGNLTKLTDLYLDQN 307 (495)
Q Consensus 237 ---------~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n 307 (495)
.+.+|..+..+++|..|++++|.+. .+|..++ .+..|+.|+++.|.|. ..|..+..+..++.+-.++|
T Consensus 415 T~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~-~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~n 491 (565)
T KOG0472|consen 415 TDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMG-SLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNN 491 (565)
T ss_pred HHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhh-hhhhhheecccccccc-cchHHHhhHHHHHHHHhccc
Confidence 3356666777788888888888776 7887777 6777888888888876 67777766677777777778
Q ss_pred cccccCCccccCCCcCCEEeCcCCcccccCCcCccCCCCCcEEEccCCcCc
Q 011044 308 KLQGKIPHEIGNLRKLEWLMLSHNKLVGVVPAPIFNLSTLISLQLHNNSLS 358 (495)
Q Consensus 308 ~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 358 (495)
++...-+..+.++.+|..|++.+|.+. .+|..++++.+|++|++++|++.
T Consensus 492 qi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 492 QIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 887555556899999999999999988 67889999999999999999987
No 9
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=2.9e-22 Score=223.29 Aligned_cols=308 Identities=24% Similarity=0.266 Sum_probs=151.4
Q ss_pred CeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEEc
Q 011044 56 RVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLFL 135 (495)
Q Consensus 56 ~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~l 135 (495)
+++.|.+.++.+. .+|..+ .+.+|++|++.+|.+. .++..+..+++|++|+++++...+.+|. +. .+++|++|++
T Consensus 590 ~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls-~l~~Le~L~L 664 (1153)
T PLN03210 590 KLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LS-MATNLETLKL 664 (1153)
T ss_pred ccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cc-cCCcccEEEe
Confidence 4555555555443 334333 3455666666666554 4455555566666666665544445543 22 2566666666
Q ss_pred ccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCCCc
Q 011044 136 KYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLTGT 215 (495)
Q Consensus 136 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ 215 (495)
++|.....+|..++++++|+.|++++|.....+|..+ ++++|++|++++|.....+|.. .++|++|++++|.+. .
T Consensus 665 ~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~ 739 (1153)
T PLN03210 665 SDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-E 739 (1153)
T ss_pred cCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-c
Confidence 6655444556666666666666666554333455443 4556666666665444333321 234555666655554 3
Q ss_pred CchhhhcCCCCceeeCCCCcCC-------CCCCcccccccccceeeccCcccccccchhhhhCCccccccccccceeeec
Q 011044 216 IPSSIFSLSSLLNLDLSLNNFT-------GIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSGA 288 (495)
Q Consensus 216 ~~~~l~~l~~L~~L~Ls~n~l~-------~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 288 (495)
+|..+ .+++|++|.+.++... ...+......++|+.|++++|.....+|..+. .+++|+.|++++|...+.
T Consensus 740 lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~-~L~~L~~L~Ls~C~~L~~ 817 (1153)
T PLN03210 740 FPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQ-NLHKLEHLEIENCINLET 817 (1153)
T ss_pred ccccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhh-CCCCCCEEECCCCCCcCe
Confidence 33322 2344444444332110 00011111224555555555544445555544 555666666655543334
Q ss_pred ccccccCCCCCCeeecccccccccCCccccCCCcCCEEeCcCCcccccCCcCccCCCCCcEEEccCCcCceecCCCCCCC
Q 011044 289 IPKEIGNLTKLTDLYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLVGVVPAPIFNLSTLISLQLHNNSLSGSLPSSADVP 368 (495)
Q Consensus 289 ~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 368 (495)
+|..+ .+++|+.|++++|.....+|. ..++|+.|++++|.+. .+|.++..+++|+.|++++|+-...+|.... .
T Consensus 818 LP~~~-~L~sL~~L~Ls~c~~L~~~p~---~~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~-~ 891 (1153)
T PLN03210 818 LPTGI-NLESLESLDLSGCSRLRTFPD---ISTNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNIS-K 891 (1153)
T ss_pred eCCCC-CccccCEEECCCCCccccccc---cccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccc-c
Confidence 44333 455555555555543333332 1245555666665554 3455555666666666666443334443322 3
Q ss_pred CCChhhhhhhhcC
Q 011044 369 LPNLEELFLWEYG 381 (495)
Q Consensus 369 l~~L~~L~l~~~~ 381 (495)
+++|+.+++.+|.
T Consensus 892 L~~L~~L~l~~C~ 904 (1153)
T PLN03210 892 LKHLETVDFSDCG 904 (1153)
T ss_pred ccCCCeeecCCCc
Confidence 4445554544443
No 10
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.88 E-value=2.4e-21 Score=216.02 Aligned_cols=288 Identities=24% Similarity=0.291 Sum_probs=230.1
Q ss_pred CCCeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEE
Q 011044 54 SHRVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESL 133 (495)
Q Consensus 54 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L 133 (495)
+.+++.|+|+++.+. .++..+..+++|++|+|+++.....+|. +..+++|++|++++|.....+|..+.. +++|+.|
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~-L~~L~~L 686 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQY-LNKLEDL 686 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhc-cCCCCEE
Confidence 468999999999987 5677788999999999998865557774 888999999999999887899988876 9999999
Q ss_pred EcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCC
Q 011044 134 FLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLT 213 (495)
Q Consensus 134 ~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 213 (495)
++++|.....+|..+ ++++|++|++++|.....+|.. ..+|++|++++|.+. .+|..+ .+++|++|.+.++...
T Consensus 687 ~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~ 760 (1153)
T PLN03210 687 DMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSE 760 (1153)
T ss_pred eCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchh
Confidence 999987555777765 7899999999998765555542 468999999999986 566654 5788888888764321
Q ss_pred -------CcCchhhhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCccccccccccceee
Q 011044 214 -------GTIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFS 286 (495)
Q Consensus 214 -------~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 286 (495)
...+......++|+.|++++|...+.+|..++++++|+.|++++|...+.+|..+ .+++|+.|++++|...
T Consensus 761 ~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~--~L~sL~~L~Ls~c~~L 838 (1153)
T PLN03210 761 KLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI--NLESLESLDLSGCSRL 838 (1153)
T ss_pred hccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC--CccccCEEECCCCCcc
Confidence 1112223345789999999998877888889999999999999885444777654 5789999999998654
Q ss_pred ecccccccCCCCCCeeecccccccccCCccccCCCcCCEEeCcCCcccccCCcCccCCCCCcEEEccCCc
Q 011044 287 GAIPKEIGNLTKLTDLYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLVGVVPAPIFNLSTLISLQLHNNS 356 (495)
Q Consensus 287 ~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 356 (495)
..+|.. .++|+.|+|++|.+. .+|..+..+++|+.|++++|+-...+|..+..+++|+.+++++|.
T Consensus 839 ~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 839 RTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred cccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 455543 367899999999987 678888999999999999975444577778888999999999886
No 11
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.85 E-value=1.5e-20 Score=195.43 Aligned_cols=263 Identities=28% Similarity=0.380 Sum_probs=200.8
Q ss_pred CCeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEE
Q 011044 55 HRVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLF 134 (495)
Q Consensus 55 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~ 134 (495)
.+-..|++++++++ .+|+.+. ++|+.|++.+|.++ .+|. ..++|++|++++|.++ .+|.. .++|+.|+
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lt-sLP~l----p~sL~~L~ 268 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPVL----PPGLLELS 268 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccC-cccCc----ccccceee
Confidence 34567899999998 6777665 48999999999988 4664 2578999999999886 55642 57899999
Q ss_pred cccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCCC
Q 011044 135 LKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLTG 214 (495)
Q Consensus 135 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 214 (495)
+++|.++ .+|..+ .+|+.|++++|+++ .+|. ..++|++|++++|.+.+ +|.. ..+|+.|++++|.+++
T Consensus 269 Ls~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~ 336 (788)
T PRK15387 269 IFSNPLT-HLPALP---SGLCKLWIFGNQLT-SLPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS 336 (788)
T ss_pred ccCCchh-hhhhch---hhcCEEECcCCccc-cccc---cccccceeECCCCcccc-CCCC---cccccccccccCcccc
Confidence 9999887 455432 56888999999988 4554 24689999999999884 4432 3467888999999873
Q ss_pred cCchhhhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCccccccccccceeeeccccccc
Q 011044 215 TIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSGAIPKEIG 294 (495)
Q Consensus 215 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 294 (495)
+|.. ..+|+.|++++|++++. |.. ..+|+.|++++|.++ .+|.. ..+|+.|++++|.+++ +|..
T Consensus 337 -LP~l---p~~Lq~LdLS~N~Ls~L-P~l---p~~L~~L~Ls~N~L~-~LP~l----~~~L~~LdLs~N~Lt~-LP~l-- 400 (788)
T PRK15387 337 -LPTL---PSGLQELSVSDNQLASL-PTL---PSELYKLWAYNNRLT-SLPAL----PSGLKELIVSGNRLTS-LPVL-- 400 (788)
T ss_pred -cccc---ccccceEecCCCccCCC-CCC---Ccccceehhhccccc-cCccc----ccccceEEecCCcccC-CCCc--
Confidence 5531 24799999999999853 432 357888999999987 56642 3578999999999874 4432
Q ss_pred CCCCCCeeecccccccccCCccccCCCcCCEEeCcCCcccccCCcCccCCCCCcEEEccCCcCceecCC
Q 011044 295 NLTKLTDLYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLVGVVPAPIFNLSTLISLQLHNNSLSGSLPS 363 (495)
Q Consensus 295 ~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 363 (495)
.++|+.|++++|+++. +|.. ..+|+.|++++|+++ .+|..+..+++|+.|++++|++++..+.
T Consensus 401 -~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 401 -PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred -ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 3678999999999884 6643 347888999999988 5788888999999999999999866443
No 12
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.85 E-value=1.1e-22 Score=205.66 Aligned_cols=245 Identities=29% Similarity=0.357 Sum_probs=170.5
Q ss_pred CCCcEEEccCCcccccCChhHhhcCCCCCEEEcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEE
Q 011044 103 SSLLSIYFNNNTLFGELPPNFCNQMSNLESLFLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLN 182 (495)
Q Consensus 103 ~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 182 (495)
.+|++++++.|.++ .+|..+.. +.+|+.|...+|.++ .+|..+...++|+.|.+..|.+. .+|....++..|++|+
T Consensus 241 ~nl~~~dis~n~l~-~lp~wi~~-~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLd 316 (1081)
T KOG0618|consen 241 LNLQYLDISHNNLS-NLPEWIGA-CANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLD 316 (1081)
T ss_pred ccceeeecchhhhh-cchHHHHh-cccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeee
Confidence 45666666666663 45544444 666666666666664 55666666666666666666665 4555556666777777
Q ss_pred ccCCCCCCCCChh-hhCccc-ccEEEecCCcCCCcCchhhhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCccc
Q 011044 183 LRQNKLQGEIPEE-LGNLAE-LEMLWLQNNSLTGTIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQL 260 (495)
Q Consensus 183 L~~n~l~~~~~~~-l~~l~~-L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l 260 (495)
|..|.+. .+|+. +.-... |+.|+.+.|.+.......=...+.|+.|.+.+|.+++.....+..+.+|+.|+|++|.+
T Consensus 317 L~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL 395 (1081)
T KOG0618|consen 317 LQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRL 395 (1081)
T ss_pred ehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccccc
Confidence 7777665 33332 222222 55555565555422211122356788888888888877666788888999999999988
Q ss_pred ccccchhhhhCCccccccccccceeeecccccccCCCCCCeeecccccccccCCccccCCCcCCEEeCcCCcccccCCcC
Q 011044 261 SGELPANIGNNLPSLQTLSLYVNDFSGAIPKEIGNLTKLTDLYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLVGVVPAP 340 (495)
Q Consensus 261 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 340 (495)
. .+|.....+++.|+.|+|++|+++ .+|..+..++.|++|...+|++. ..| .+..++.|+.+|++.|+++......
T Consensus 396 ~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~ 471 (1081)
T KOG0618|consen 396 N-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPE 471 (1081)
T ss_pred c-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhh
Confidence 7 788777778888999999999887 67788888889999999888887 556 6788899999999999887544333
Q ss_pred ccCCCCCcEEEccCCc
Q 011044 341 IFNLSTLISLQLHNNS 356 (495)
Q Consensus 341 ~~~l~~L~~L~l~~n~ 356 (495)
...-++|++||+++|.
T Consensus 472 ~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 472 ALPSPNLKYLDLSGNT 487 (1081)
T ss_pred hCCCcccceeeccCCc
Confidence 3333789999999986
No 13
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=3.9e-20 Score=193.65 Aligned_cols=313 Identities=23% Similarity=0.397 Sum_probs=226.9
Q ss_pred CChHHHHHHHHHHhhCCCCCCcccc---CCCCCCCCCCccce----------------eeeCCCCCCeEEEEcCCCCCcc
Q 011044 9 SITTDQQALLVLKAHVTDDPTNFLA---KNWNTSSSFCYWTG----------------VTCDVRSHRVAALNISGLNLTG 69 (495)
Q Consensus 9 ~~~~~~~~ll~~~~~~~~~~~~~l~---~~w~~~~~~c~w~g----------------v~c~~~~~~l~~L~L~~~~l~~ 69 (495)
...+|.++++++...+ ..|. ... ..|+...++|.-.. |.|.. +.++++..-+.....
T Consensus 60 ~~~~~~~~~~~~~~~l-~~p~-~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~--~~vt~l~~~g~~~~~ 135 (754)
T PRK15370 60 ASPEEIKSKFECLRML-AFPA-YADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGG--KSVTYTRVTESEQAS 135 (754)
T ss_pred CCHHHHHHHHHHHHHh-cCCc-hhhccccccCCCCcccccCCcchhhheeeecCCceEEecCC--Ccccccccccccccc
Confidence 3567899999999999 4663 343 24998889997644 45543 567777654432211
Q ss_pred cC--ch--------------------------hc-----cCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCccc
Q 011044 70 TI--PS--------------------------EL-----ANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLF 116 (495)
Q Consensus 70 ~~--~~--------------------------~l-----~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 116 (495)
.. +. .+ .-..+...|+++++.++ .+|..+. ++|+.|++++|.+.
T Consensus 136 ~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt 212 (754)
T PRK15370 136 SASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK 212 (754)
T ss_pred cCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC
Confidence 10 00 00 01145788999998887 5666553 57999999999985
Q ss_pred ccCChhHhhcCCCCCEEEcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhh
Q 011044 117 GELPPNFCNQMSNLESLFLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEEL 196 (495)
Q Consensus 117 ~~~p~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l 196 (495)
.+|..+. ++|++|++++|.++ .+|..+. ++|+.|++++|.+. .+|..+. .+|++|++++|.+. .+|..+
T Consensus 213 -sLP~~l~---~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l 281 (754)
T PRK15370 213 -SLPENLQ---GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENL 281 (754)
T ss_pred -cCChhhc---cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-cccccc
Confidence 6777663 58999999999988 5666553 47999999999988 6676654 57999999999988 567655
Q ss_pred hCcccccEEEecCCcCCCcCchhhhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCcccc
Q 011044 197 GNLAELEMLWLQNNSLTGTIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQ 276 (495)
Q Consensus 197 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 276 (495)
. ++|+.|++++|.++. +|..+. ++|+.|++++|.++.. |..+ .++|+.|++++|.++ .+|..+. ++|+
T Consensus 282 ~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~L-P~~l--~~sL~~L~Ls~N~Lt-~LP~~l~---~sL~ 349 (754)
T PRK15370 282 P--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTAL-PETL--PPGLKTLEAGENALT-SLPASLP---PELQ 349 (754)
T ss_pred C--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccccC-Cccc--cccceeccccCCccc-cCChhhc---Cccc
Confidence 3 589999999999884 554432 4788999999998853 4333 368999999999988 5776543 6899
Q ss_pred ccccccceeeecccccccCCCCCCeeecccccccccCCccccCCCcCCEEeCcCCcccccCCcCc----cCCCCCcEEEc
Q 011044 277 TLSLYVNDFSGAIPKEIGNLTKLTDLYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLVGVVPAPI----FNLSTLISLQL 352 (495)
Q Consensus 277 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~----~~l~~L~~L~l 352 (495)
.|++++|+++ .+|..+. ++|+.|++++|.++ .+|..+. ..|+.|++++|++. .+|..+ ..++.+..+++
T Consensus 350 ~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L 422 (754)
T PRK15370 350 VLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIV 422 (754)
T ss_pred EEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEe
Confidence 9999999887 4565543 68999999999988 5565543 46889999999987 445433 34578899999
Q ss_pred cCCcCc
Q 011044 353 HNNSLS 358 (495)
Q Consensus 353 ~~n~l~ 358 (495)
.+|++.
T Consensus 423 ~~Npls 428 (754)
T PRK15370 423 EYNPFS 428 (754)
T ss_pred eCCCcc
Confidence 999886
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.84 E-value=6.3e-23 Score=207.30 Aligned_cols=309 Identities=28% Similarity=0.367 Sum_probs=190.5
Q ss_pred CeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcc--------------------
Q 011044 56 RVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTL-------------------- 115 (495)
Q Consensus 56 ~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~-------------------- 115 (495)
.++.++|..+.+.+.++..+..+.+ .|+|+.|.+.. ..+.++.+|+.|....|.+
T Consensus 157 ~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~---~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l 231 (1081)
T KOG0618|consen 157 SIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEV---LDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPL 231 (1081)
T ss_pred cchhhhhhhhhcccchhcchhhhhe--eeecccchhhh---hhhhhccchhhhhhhhcccceEEecCcchheeeeccCcc
Confidence 3677777777777777777776666 67777777651 1244455555555555444
Q ss_pred cccCChhHhhcCCCCCEEEcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChh
Q 011044 116 FGELPPNFCNQMSNLESLFLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEE 195 (495)
Q Consensus 116 ~~~~p~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 195 (495)
....+.. .-.+|+++++++|.++ .+|..++.+.+|+.++..+|.+. .+|..+....+|++|.+..|.+. .+|..
T Consensus 232 ~~~~~~p---~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~ 305 (1081)
T KOG0618|consen 232 TTLDVHP---VPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPF 305 (1081)
T ss_pred eeecccc---ccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCc
Confidence 2111100 0234555555555554 34455555555555555555553 44444555555555555555554 44444
Q ss_pred hhCcccccEEEecCCcCCCcCchhh-hcCC-CCceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCc
Q 011044 196 LGNLAELEMLWLQNNSLTGTIPSSI-FSLS-SLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLP 273 (495)
Q Consensus 196 l~~l~~L~~L~l~~n~l~~~~~~~l-~~l~-~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~ 273 (495)
..+++.|++|+|..|.+. .+|+.+ .-.. .|..|+.+.|.+.......=...+.|+.|++.+|.+++.....+. .++
T Consensus 306 le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~-~~~ 383 (1081)
T KOG0618|consen 306 LEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLV-NFK 383 (1081)
T ss_pred ccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhc-ccc
Confidence 455555555555555554 233322 2222 244555555554432211112345678888888888866555444 778
Q ss_pred cccccccccceeeecccccccCCCCCCeeecccccccccCCccccCCCcCCEEeCcCCcccccCCcCccCCCCCcEEEcc
Q 011044 274 SLQTLSLYVNDFSGAIPKEIGNLTKLTDLYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLVGVVPAPIFNLSTLISLQLH 353 (495)
Q Consensus 274 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 353 (495)
+|+.|+|++|++.......+.+++.|+.|+|++|+++ .+|.....++.|++|...+|++. ..| .+..++.|+.+|++
T Consensus 384 hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS 460 (1081)
T KOG0618|consen 384 HLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLS 460 (1081)
T ss_pred ceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecc
Confidence 8999999999887544456788888889999999888 67788888889999988888887 456 78899999999999
Q ss_pred CCcCceecCCCCCCCCCChhhhhhhhcC
Q 011044 354 NNSLSGSLPSSADVPLPNLEELFLWEYG 381 (495)
Q Consensus 354 ~n~l~~~~~~~~~~~l~~L~~L~l~~~~ 381 (495)
.|+++...-. ...+-|+|++|++.+|.
T Consensus 461 ~N~L~~~~l~-~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 461 CNNLSEVTLP-EALPSPNLKYLDLSGNT 487 (1081)
T ss_pred cchhhhhhhh-hhCCCcccceeeccCCc
Confidence 9998733222 12234789999888666
No 15
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.81 E-value=6.5e-20 Score=191.98 Aligned_cols=252 Identities=26% Similarity=0.442 Sum_probs=192.1
Q ss_pred eeeCCCCCCeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcC
Q 011044 48 VTCDVRSHRVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQM 127 (495)
Q Consensus 48 v~c~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l 127 (495)
..|.. .+.+.|++++++++ .+|..+. ++|+.|+|++|.++ .+|..+. ++|++|++++|.+. .+|..+ .
T Consensus 173 ~~Cl~--~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l---~ 240 (754)
T PRK15370 173 RDCLK--NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATL---P 240 (754)
T ss_pred Hhhcc--cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhh---h
Confidence 34543 56789999999988 4565453 57999999999998 5666554 58999999999985 677765 3
Q ss_pred CCCCEEEcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEe
Q 011044 128 SNLESLFLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWL 207 (495)
Q Consensus 128 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l 207 (495)
++|+.|++++|.+. .+|..+. .+|+.|++++|+++ .+|..+. ++|++|++++|.++. +|..+. ++|+.|++
T Consensus 241 ~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~L 311 (754)
T PRK15370 241 DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNV 311 (754)
T ss_pred ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHh
Confidence 57999999999988 6676654 57999999999988 5676554 589999999999884 554442 47889999
Q ss_pred cCCcCCCcCchhhhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCccccccccccceeee
Q 011044 208 QNNSLTGTIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSG 287 (495)
Q Consensus 208 ~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 287 (495)
++|.++. +|..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|.++
T Consensus 312 s~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp---~~L~~LdLs~N~Lt- 380 (754)
T PRK15370 312 QSNSLTA-LPETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP---PTITTLDVSRNALT- 380 (754)
T ss_pred cCCcccc-CCccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc---CCcCEEECCCCcCC-
Confidence 9999883 55443 3689999999999886 454443 68999999999987 6776543 68999999999987
Q ss_pred cccccccCCCCCCeeecccccccccCCcc----ccCCCcCCEEeCcCCccc
Q 011044 288 AIPKEIGNLTKLTDLYLDQNKLQGKIPHE----IGNLRKLEWLMLSHNKLV 334 (495)
Q Consensus 288 ~~~~~l~~l~~L~~L~L~~n~i~~~~~~~----l~~l~~L~~L~l~~n~l~ 334 (495)
.+|..+. ..|+.|++++|++. .+|.. +..++.+..|++.+|++.
T Consensus 381 ~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 381 NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 4555543 36889999999987 44443 344578899999999876
No 16
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.81 E-value=9.6e-22 Score=181.19 Aligned_cols=134 Identities=24% Similarity=0.308 Sum_probs=119.6
Q ss_pred CCCeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccC-CcccccCChhHhhcCCCCCE
Q 011044 54 SHRVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNN-NTLFGELPPNFCNQMSNLES 132 (495)
Q Consensus 54 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~-n~~~~~~p~~~~~~l~~L~~ 132 (495)
|+..+.|.|..|+|+...+.+|+.+++||.|+|++|.|+.+.|++|.++++|..|.+.+ |+| ..+|...+.++..|+.
T Consensus 66 P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI-~~l~k~~F~gL~slqr 144 (498)
T KOG4237|consen 66 PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI-TDLPKGAFGGLSSLQR 144 (498)
T ss_pred CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch-hhhhhhHhhhHHHHHH
Confidence 67889999999999988888999999999999999999999999999999998888877 666 6899998888999999
Q ss_pred EEcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCC
Q 011044 133 LFLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKL 188 (495)
Q Consensus 133 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 188 (495)
|.+.-|++.-.....|..+++|..|.+.+|.+...--..|..+..++.+.+..|.+
T Consensus 145 LllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ 200 (498)
T KOG4237|consen 145 LLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPF 200 (498)
T ss_pred HhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcc
Confidence 99999999877788899999999999999988844444788889999999988874
No 17
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.81 E-value=5.6e-19 Score=183.90 Aligned_cols=244 Identities=27% Similarity=0.353 Sum_probs=193.5
Q ss_pred CCeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEE
Q 011044 55 HRVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLF 134 (495)
Q Consensus 55 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~ 134 (495)
++++.|++.+|+++. +|. .+++|++|++++|+++ .+|.. .++|++|++++|.+. .+|.. ..+|+.|+
T Consensus 222 ~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~Lp~l----p~~L~~L~ 288 (788)
T PRK15387 222 AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLT-HLPAL----PSGLCKLW 288 (788)
T ss_pred cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccCCchh-hhhhc----hhhcCEEE
Confidence 579999999999985 453 3689999999999998 45642 468999999999984 45542 46799999
Q ss_pred cccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCCC
Q 011044 135 LKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLTG 214 (495)
Q Consensus 135 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 214 (495)
+++|+++ .+|.. .++|+.|++++|++++ +|.. ..+|+.|++++|.+++ +|. ...+|+.|++++|.++.
T Consensus 289 Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-LP~---lp~~Lq~LdLS~N~Ls~ 356 (788)
T PRK15387 289 IFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-LPT---LPSGLQELSVSDNQLAS 356 (788)
T ss_pred CcCCccc-ccccc---ccccceeECCCCcccc-CCCC---cccccccccccCcccc-ccc---cccccceEecCCCccCC
Confidence 9999998 45553 4789999999999985 4542 2468889999999874 553 12579999999999984
Q ss_pred cCchhhhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCccccccccccceeeeccccccc
Q 011044 215 TIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSGAIPKEIG 294 (495)
Q Consensus 215 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 294 (495)
+|.. .++|+.|++++|.++. +|.. ..+|+.|++++|.++ .+|.. .++|+.|++++|.+++ +|..
T Consensus 357 -LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt-~LP~l----~s~L~~LdLS~N~Lss-IP~l-- 420 (788)
T PRK15387 357 -LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLT-SLPVL----PSELKELMVSGNRLTS-LPML-- 420 (788)
T ss_pred -CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCccc-CCCCc----ccCCCEEEccCCcCCC-CCcc--
Confidence 5542 3578899999999985 4543 357999999999998 56642 3689999999999984 5543
Q ss_pred CCCCCCeeecccccccccCCccccCCCcCCEEeCcCCcccccCCcCc
Q 011044 295 NLTKLTDLYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLVGVVPAPI 341 (495)
Q Consensus 295 ~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~ 341 (495)
..+|+.|++++|+++ .+|..+..+++|+.|++++|++.+..+..+
T Consensus 421 -~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 421 -PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred -hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 357889999999998 789999999999999999999998766655
No 18
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.79 E-value=1e-20 Score=183.65 Aligned_cols=203 Identities=27% Similarity=0.293 Sum_probs=108.1
Q ss_pred EEEcCCCCCcc-cCchhccCCCCCCEEeCcCCcCCcc----CCccccCCCCCcEEEccCCcccc------cCChhHhhcC
Q 011044 59 ALNISGLNLTG-TIPSELANLSSLQALDLSFNWFYGS----IPSSIFNMSSLLSIYFNNNTLFG------ELPPNFCNQM 127 (495)
Q Consensus 59 ~L~L~~~~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~l~~n~~~~------~~p~~~~~~l 127 (495)
.|+|..+.+++ .....+..+++|++|+++++.+++. ++..+...++|++++++++.+.+ .++..+.. +
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~-~ 80 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTK-G 80 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHh-c
Confidence 35555666552 2334455566677777777766432 34445556666777776665531 12222323 5
Q ss_pred CCCCEEEcccccCCccCCcccCCCCC---CCEEEcccCcCcc----ccCccccCC-CCCCEEEccCCCCCCC----CChh
Q 011044 128 SNLESLFLKYNMFHGKIPSTLSSCKQ---LRELSLSSNYFSG----TIPKEIGNL-TKLTRLNLRQNKLQGE----IPEE 195 (495)
Q Consensus 128 ~~L~~L~l~~n~l~~~~~~~l~~l~~---L~~L~l~~n~l~~----~~~~~l~~l-~~L~~L~L~~n~l~~~----~~~~ 195 (495)
++|+.|++++|.+....+..+..+.+ |++|++++|.+.+ .+...+..+ ++|+.|++++|.+++. ++..
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 160 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKA 160 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHH
Confidence 66777777666665444443333333 6777776666652 122334444 6667777776666532 2223
Q ss_pred hhCcccccEEEecCCcCCCc----CchhhhcCCCCceeeCCCCcCCCCC----CcccccccccceeeccCccccc
Q 011044 196 LGNLAELEMLWLQNNSLTGT----IPSSIFSLSSLLNLDLSLNNFTGII----PSSIGNLSSLQKLYLSDNQLSG 262 (495)
Q Consensus 196 l~~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~~----~~~l~~~~~L~~L~l~~n~l~~ 262 (495)
+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+++.. ...+..+++|+.|++++|.+++
T Consensus 161 ~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 161 LRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 44555666666666666532 2223344456666666666654321 2223445556666666665553
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.76 E-value=5e-20 Score=178.79 Aligned_cols=254 Identities=22% Similarity=0.244 Sum_probs=114.8
Q ss_pred EEeCcCCcCCc-cCCccccCCCCCcEEEccCCccccc----CChhHhhcCCCCCEEEcccccCCc------cCCcccCCC
Q 011044 83 ALDLSFNWFYG-SIPSSIFNMSSLLSIYFNNNTLFGE----LPPNFCNQMSNLESLFLKYNMFHG------KIPSTLSSC 151 (495)
Q Consensus 83 ~L~L~~n~l~~-~~~~~l~~l~~L~~L~l~~n~~~~~----~p~~~~~~l~~L~~L~l~~n~l~~------~~~~~l~~l 151 (495)
.|+|..+.+++ .....+..+.+|++|+++++.+.+. ++..+. ..++|++|+++++.+.+ .++..+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~-~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~ 80 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALR-PQPSLKELCLSLNETGRIPRGLQSLLQGLTKG 80 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHh-hCCCceEEeccccccCCcchHHHHHHHHHHhc
Confidence 35555555552 2333344455566666666665322 222222 24556666665555441 112233344
Q ss_pred CCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCCC----cCchhhhcC-CCC
Q 011044 152 KQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLTG----TIPSSIFSL-SSL 226 (495)
Q Consensus 152 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~----~~~~~l~~l-~~L 226 (495)
++|+.|++++|.+.+..+..+..+.+ . ++|++|++++|.+++ .+...+..+ ++|
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~--------------------~-~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L 139 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLR--------------------S-SSLQELKLNNNGLGDRGLRLLAKGLKDLPPAL 139 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhc--------------------c-CcccEEEeeCCccchHHHHHHHHHHHhCCCCc
Confidence 45555555544444333333322222 0 114455554444431 111223333 455
Q ss_pred ceeeCCCCcCCCC----CCcccccccccceeeccCcccccccchhhh---hCCccccccccccceeeec----ccccccC
Q 011044 227 LNLDLSLNNFTGI----IPSSIGNLSSLQKLYLSDNQLSGELPANIG---NNLPSLQTLSLYVNDFSGA----IPKEIGN 295 (495)
Q Consensus 227 ~~L~Ls~n~l~~~----~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~---~~l~~L~~L~L~~n~l~~~----~~~~l~~ 295 (495)
+.|++++|.+++. ++..+..+++|++|++++|.+++.....+. ..+++|+.|++++|.+++. +...+..
T Consensus 140 ~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~ 219 (319)
T cd00116 140 EKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLAS 219 (319)
T ss_pred eEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcc
Confidence 5555555554421 112233344555555555555432111111 1233555555655555321 2233445
Q ss_pred CCCCCeeecccccccccCCcccc-----CCCcCCEEeCcCCcccc----cCCcCccCCCCCcEEEccCCcCc
Q 011044 296 LTKLTDLYLDQNKLQGKIPHEIG-----NLRKLEWLMLSHNKLVG----VVPAPIFNLSTLISLQLHNNSLS 358 (495)
Q Consensus 296 l~~L~~L~L~~n~i~~~~~~~l~-----~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~ 358 (495)
+++|++|++++|.+++.....+. ..+.|++|++++|.+++ .+...+..+++|+++++++|.+.
T Consensus 220 ~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 220 LKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred cCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 56666666666666542111111 13566666666666642 12223344466677777776665
No 20
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.76 E-value=2.2e-20 Score=172.33 Aligned_cols=293 Identities=23% Similarity=0.251 Sum_probs=178.5
Q ss_pred EcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEEccc-cc
Q 011044 61 NISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLFLKY-NM 139 (495)
Q Consensus 61 ~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~l~~-n~ 139 (495)
+-++.+++ .+|..+- +.-..++|..|+|+...+.+|+.+++|+.|+|++|.|+..-|..|.. +++|.+|-+.+ |+
T Consensus 52 dCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~G-L~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 52 DCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKG-LASLLSLVLYGNNK 127 (498)
T ss_pred EccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhh-hHhhhHHHhhcCCc
Confidence 44455555 3444332 35678889999998777788888999999999999886555555554 88877776666 78
Q ss_pred CCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCCC-----
Q 011044 140 FHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLTG----- 214 (495)
Q Consensus 140 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~----- 214 (495)
|+......|.++..|+.|.+.-|++.-...+.|..+++|..|.+.+|.+....-.+|..+..++.+.+..|.+..
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~ 207 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLP 207 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccc
Confidence 886556678888888888888888876666778888888888888887763333367777888888777665320
Q ss_pred -------cCchhhhcCCCCceeeCCCCcCCCCCCccccc-ccccceeeccCcccccccchhhhhCCccccccccccceee
Q 011044 215 -------TIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGN-LSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFS 286 (495)
Q Consensus 215 -------~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~-~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 286 (495)
..|..++...-..-..+.+.++..+.+..+.- ...+..--.+.+...+..|..-+..+++|+.|+|++|.++
T Consensus 208 wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~ 287 (498)
T KOG4237|consen 208 WLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKIT 287 (498)
T ss_pred hhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccc
Confidence 01111111111111222222222221111110 0111111112222223444444556666777777777666
Q ss_pred ecccccccCCCCCCeeecccccccccCCccccCCCcCCEEeCcCCcccccCCcCccCCCCCcEEEccCCcC
Q 011044 287 GAIPKEIGNLTKLTDLYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLVGVVPAPIFNLSTLISLQLHNNSL 357 (495)
Q Consensus 287 ~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 357 (495)
++-..+|.+...++.|.|..|++.......|.++..|+.|+|.+|+|+...|..|..+.+|..|++-.|++
T Consensus 288 ~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 288 RIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred hhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 66666666666666677766666644444566666666677777776666666666666666666666544
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.68 E-value=6.5e-19 Score=144.65 Aligned_cols=155 Identities=28% Similarity=0.474 Sum_probs=96.6
Q ss_pred CCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEEcccccCCccCCcccCCCCCCCE
Q 011044 77 NLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLFLKYNMFHGKIPSTLSSCKQLRE 156 (495)
Q Consensus 77 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 156 (495)
++.+++.|.|++|+++ .+|..++.+.+|+.|++++|++ ..+|..+.. +++|+.|++.-|++. .+|..|+.++.|++
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqi-e~lp~~iss-l~klr~lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQI-EELPTSISS-LPKLRILNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchh-hhcChhhhh-chhhhheecchhhhh-cCccccCCCchhhh
Confidence 4455555666666665 4455566666666666666665 455666555 666666666666665 56666777777777
Q ss_pred EEcccCcCc-cccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCCCcCchhhhcCCCCceeeCCCCc
Q 011044 157 LSLSSNYFS-GTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLTGTIPSSIFSLSSLLNLDLSLNN 235 (495)
Q Consensus 157 L~l~~n~l~-~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~ 235 (495)
||+.+|++. ..+|..|..+..|+.|++++|.+. .+|..++++++|+.|.+..|.+- .+|..++.+..|++|.+.+|+
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccce
Confidence 777666554 235555666666666666666665 55666666666666666666655 456666666666666666666
Q ss_pred CC
Q 011044 236 FT 237 (495)
Q Consensus 236 l~ 237 (495)
++
T Consensus 185 l~ 186 (264)
T KOG0617|consen 185 LT 186 (264)
T ss_pred ee
Confidence 65
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.68 E-value=1.2e-18 Score=143.21 Aligned_cols=161 Identities=36% Similarity=0.606 Sum_probs=111.1
Q ss_pred CCCCCEEEcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEE
Q 011044 127 MSNLESLFLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLW 206 (495)
Q Consensus 127 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 206 (495)
+.+.+.|.+++|+++ .+|..+..+.+|++|++.+|++. .+|..++.+++|+.|+++-|++. ..|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 555666667777666 45556667777777777777766 56666777777777777776665 6677777777777777
Q ss_pred ecCCcCC-CcCchhhhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCcccccccccccee
Q 011044 207 LQNNSLT-GTIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDF 285 (495)
Q Consensus 207 l~~n~l~-~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l 285 (495)
+.+|.+. ..+|..|..+..|+.|.+++|.++ .+|..++++++|+.|.+..|.+. ..|..++ .+..|+.|++.+|.+
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig-~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIG-DLTRLRELHIQGNRL 185 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHH-HHHHHHHHhccccee
Confidence 7776665 345666777777777777777776 55556777777777777777776 6777766 577777777777777
Q ss_pred eeccccccc
Q 011044 286 SGAIPKEIG 294 (495)
Q Consensus 286 ~~~~~~~l~ 294 (495)
+ .+|..++
T Consensus 186 ~-vlppel~ 193 (264)
T KOG0617|consen 186 T-VLPPELA 193 (264)
T ss_pred e-ecChhhh
Confidence 6 4444443
No 23
>PLN03150 hypothetical protein; Provisional
Probab=99.61 E-value=6.7e-15 Score=153.79 Aligned_cols=151 Identities=26% Similarity=0.500 Sum_probs=117.4
Q ss_pred CCCCChHHHHHHHHHHhhCCCCCCccccCCCCCCCCCC-----ccceeeeCCCC----CCeEEEEcCCCCCcccCchhcc
Q 011044 6 NTTSITTDQQALLVLKAHVTDDPTNFLAKNWNTSSSFC-----YWTGVTCDVRS----HRVAALNISGLNLTGTIPSELA 76 (495)
Q Consensus 6 ~~~~~~~~~~~ll~~~~~~~~~~~~~l~~~w~~~~~~c-----~w~gv~c~~~~----~~l~~L~L~~~~l~~~~~~~l~ 76 (495)
.+...++|+.||+.+|+.+ +++.. . +|+. ++| .|.|+.|.... ..++.|+|+++.+.|.+|..++
T Consensus 366 ~~~t~~~~~~aL~~~k~~~-~~~~~--~-~W~g--~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~ 439 (623)
T PLN03150 366 ESKTLLEEVSALQTLKSSL-GLPLR--F-GWNG--DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDIS 439 (623)
T ss_pred ccccCchHHHHHHHHHHhc-CCccc--C-CCCC--CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHh
Confidence 3445677999999999999 45542 3 8964 344 79999995321 2589999999999999999999
Q ss_pred CCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEEcccccCCccCCcccCCC-CCCC
Q 011044 77 NLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLFLKYNMFHGKIPSTLSSC-KQLR 155 (495)
Q Consensus 77 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l-~~L~ 155 (495)
.+++|++|+|++|.+.|.+|..+..+++|++|++++|.+.+.+|..+.. +++|+.|++++|.+++.+|..+... .++.
T Consensus 440 ~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~-L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~ 518 (623)
T PLN03150 440 KLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQ-LTSLRILNLNGNSLSGRVPAALGGRLLHRA 518 (623)
T ss_pred CCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhc-CCCCCEEECcCCcccccCChHHhhccccCc
Confidence 9999999999999999888888888888888888888888888877765 7788888888887777777766542 3455
Q ss_pred EEEcccCc
Q 011044 156 ELSLSSNY 163 (495)
Q Consensus 156 ~L~l~~n~ 163 (495)
.+++.+|.
T Consensus 519 ~l~~~~N~ 526 (623)
T PLN03150 519 SFNFTDNA 526 (623)
T ss_pred eEEecCCc
Confidence 56655554
No 24
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.56 E-value=5.2e-15 Score=143.87 Aligned_cols=105 Identities=26% Similarity=0.496 Sum_probs=89.0
Q ss_pred hhhcCCCccccCCCcceeehhhhhhcccCCCCCcccc-CCCCCHHHHHHHHhCC-Ccceeeeccccc-cccccccchhhH
Q 011044 377 LWEYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIF-NGEMTLRRWVNDLLSI-SVMEVVDANLLS-WKDKHFMTKEQC 453 (495)
Q Consensus 377 l~~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~-~~~~~l~~wv~~~~~~-~~~~v~d~~l~~-~~~~~~~~~~~~ 453 (495)
.+||..++.+++|+|||||||+++|++||++|.|... .+..+++.|++..... .+.+++|+++.. .+. .+++
T Consensus 246 ~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~-----~~~~ 320 (361)
T KOG1187|consen 246 APEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYP-----DEKE 320 (361)
T ss_pred ChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCC-----hHHH
Confidence 4688888999999999999999999999999998654 4456799999888876 588999999863 221 1267
Q ss_pred HHHHHHHHhhcCCCCccCchhHHHHHHHHHHHH
Q 011044 454 MSFVFNLAMECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 454 ~~~~~~~~~~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
+..++++|+.|++..|.+||+|.||+++|+.+.
T Consensus 321 ~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 321 VKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 888999999999999999999999999997654
No 25
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.24 E-value=1.6e-11 Score=122.69 Aligned_cols=178 Identities=39% Similarity=0.582 Sum_probs=83.7
Q ss_pred CCCCCcEEEccCCcccccCChhHhhcCC-CCCEEEcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCC
Q 011044 101 NMSSLLSIYFNNNTLFGELPPNFCNQMS-NLESLFLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLT 179 (495)
Q Consensus 101 ~l~~L~~L~l~~n~~~~~~p~~~~~~l~-~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 179 (495)
.++.++.|++.+|.++ .++..... .. +|+.|++++|.+. .+|..+..+++|+.|++++|.+. .+|...+.++.|+
T Consensus 114 ~~~~l~~L~l~~n~i~-~i~~~~~~-~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~ 189 (394)
T COG4886 114 ELTNLTSLDLDNNNIT-DIPPLIGL-LKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLN 189 (394)
T ss_pred cccceeEEecCCcccc-cCcccccc-chhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhh
Confidence 3344555555555542 33333322 32 5555555555554 33344455555555555555554 3333333445555
Q ss_pred EEEccCCCCCCCCChhhhCcccccEEEecCCcCCCcCchhhhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCcc
Q 011044 180 RLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLTGTIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQ 259 (495)
Q Consensus 180 ~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~ 259 (495)
.|++++|.+. .+|..+.....|++|.+++|.+. ..+..+.++.++..+.+.+|++... +..++.+++++.|++++|.
T Consensus 190 ~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~-~~~~~~l~~l~~L~~s~n~ 266 (394)
T COG4886 190 NLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDL-PESIGNLSNLETLDLSNNQ 266 (394)
T ss_pred heeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeec-cchhccccccceecccccc
Confidence 5555555554 34443333444555555555322 2334444555555555555544321 3334445555555555555
Q ss_pred cccccchhhhhCCccccccccccceeeec
Q 011044 260 LSGELPANIGNNLPSLQTLSLYVNDFSGA 288 (495)
Q Consensus 260 l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 288 (495)
++ .++. ++ .+.+++.|+++++.+...
T Consensus 267 i~-~i~~-~~-~~~~l~~L~~s~n~~~~~ 292 (394)
T COG4886 267 IS-SISS-LG-SLTNLRELDLSGNSLSNA 292 (394)
T ss_pred cc-cccc-cc-ccCccCEEeccCcccccc
Confidence 54 3322 22 445555555555555433
No 26
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.21 E-value=5.2e-12 Score=119.03 Aligned_cols=111 Identities=26% Similarity=0.266 Sum_probs=46.8
Q ss_pred cccceeeccCcccccccchhhhhCCccccccccccceeeecccccccCCCCCCeeeccccccccc-CCccccCCCcCCEE
Q 011044 248 SSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSGAIPKEIGNLTKLTDLYLDQNKLQGK-IPHEIGNLRKLEWL 326 (495)
Q Consensus 248 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~-~~~~l~~l~~L~~L 326 (495)
+.|+.|.++.|.++..-...+...+|+|+.|+|+.|............+..|+.|+|++|++.+. .....+.++.|+.|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 44455555555544332233333445555555555532111122223334455555555544421 11223445555555
Q ss_pred eCcCCcccccC-CcC-----ccCCCCCcEEEccCCcCc
Q 011044 327 MLSHNKLVGVV-PAP-----IFNLSTLISLQLHNNSLS 358 (495)
Q Consensus 327 ~l~~n~l~~~~-~~~-----~~~l~~L~~L~l~~n~l~ 358 (495)
+++.|.+...- |.. ...+++|++|++..|++.
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 55555443211 111 123455555555555553
No 27
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.20 E-value=2.8e-12 Score=117.66 Aligned_cols=249 Identities=22% Similarity=0.261 Sum_probs=117.8
Q ss_pred CCCeEEEEcCCCCCccc----CchhccCCCCCCEEeCcCCc---CCccCCc-------cccCCCCCcEEEccCCcccccC
Q 011044 54 SHRVAALNISGLNLTGT----IPSELANLSSLQALDLSFNW---FYGSIPS-------SIFNMSSLLSIYFNNNTLFGEL 119 (495)
Q Consensus 54 ~~~l~~L~L~~~~l~~~----~~~~l~~l~~L~~L~L~~n~---l~~~~~~-------~l~~l~~L~~L~l~~n~~~~~~ 119 (495)
...++.|+|++|.+... +...+.+.++|+..+++.-. ....+|. .+..+++|++|+|++|-+....
T Consensus 29 ~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 29 MDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred cCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 35678888888777533 33455666777777775431 1122332 2334555666666665553333
Q ss_pred ChhH---hhcCCCCCEEEcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCC----
Q 011044 120 PPNF---CNQMSNLESLFLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEI---- 192 (495)
Q Consensus 120 p~~~---~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~---- 192 (495)
++.+ ..++..|++|.|.+|.+...-...++ ..|..|. .+ ...+.-++|+.+..++|++....
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~--~al~~l~--~~-------kk~~~~~~Lrv~i~~rNrlen~ga~~~ 177 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLGPEAGGRLG--RALFELA--VN-------KKAASKPKLRVFICGRNRLENGGATAL 177 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCChhHHHHHH--HHHHHHH--HH-------hccCCCcceEEEEeeccccccccHHHH
Confidence 3222 22344455555555444321111111 0111111 00 11223356666666666654321
Q ss_pred ChhhhCcccccEEEecCCcCCCc----CchhhhcCCCCceeeCCCCcCCCC----CCcccccccccceeeccCccccccc
Q 011044 193 PEELGNLAELEMLWLQNNSLTGT----IPSSIFSLSSLLNLDLSLNNFTGI----IPSSIGNLSSLQKLYLSDNQLSGEL 264 (495)
Q Consensus 193 ~~~l~~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~----~~~~l~~~~~L~~L~l~~n~l~~~~ 264 (495)
...|...+.|+.+.+..|.+... +...+..+++|+.|+|.+|.++.. +...+..+++|+.|++++|.+....
T Consensus 178 A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~G 257 (382)
T KOG1909|consen 178 AEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEG 257 (382)
T ss_pred HHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccccccccccc
Confidence 23344455666666666655421 223344555555555555554422 1122334444455555444443222
Q ss_pred chhhhhCCccccccccccceeeecccccccCCCCCCeeeccccccccc----CCccccCCCcCCEEeCcCCcc
Q 011044 265 PANIGNNLPSLQTLSLYVNDFSGAIPKEIGNLTKLTDLYLDQNKLQGK----IPHEIGNLRKLEWLMLSHNKL 333 (495)
Q Consensus 265 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~----~~~~l~~l~~L~~L~l~~n~l 333 (495)
...+... .-...|+|+.|.+.+|.|+.. +..++...+.|+.|+|++|++
T Consensus 258 a~a~~~a--------------------l~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 258 AIAFVDA--------------------LKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHHHH--------------------HhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 2221100 012246677777777766642 222344567777788888776
No 28
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.18 E-value=4e-11 Score=119.87 Aligned_cols=174 Identities=39% Similarity=0.569 Sum_probs=74.5
Q ss_pred CCCCEEEcccCcCccccCccccCCC-CCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCCCcCchhhhcCCCCceee
Q 011044 152 KQLRELSLSSNYFSGTIPKEIGNLT-KLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLTGTIPSSIFSLSSLLNLD 230 (495)
Q Consensus 152 ~~L~~L~l~~n~l~~~~~~~l~~l~-~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 230 (495)
+.++.|++.+|.++ .++.....+. +|+.|++++|.+. .+|..+..+++|+.|++++|.++ .++...+..++|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 44455555555444 3333333332 4555555555544 33333445555555555555544 3333333444455555
Q ss_pred CCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCccccccccccceeeecccccccCCCCCCeeeccccccc
Q 011044 231 LSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSGAIPKEIGNLTKLTDLYLDQNKLQ 310 (495)
Q Consensus 231 Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~ 310 (495)
+++|++... |..+.....|+++.+++|.+. ..+..+. .+.++..+.+.+|.+. .++..+..++.++.|++++|.++
T Consensus 193 ls~N~i~~l-~~~~~~~~~L~~l~~~~N~~~-~~~~~~~-~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~ 268 (394)
T COG4886 193 LSGNKISDL-PPEIELLSALEELDLSNNSII-ELLSSLS-NLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS 268 (394)
T ss_pred ccCCccccC-chhhhhhhhhhhhhhcCCcce-ecchhhh-hcccccccccCCceee-eccchhccccccceecccccccc
Confidence 555544422 222223333444444444322 2222222 3444444444444443 11333444444455555554444
Q ss_pred ccCCccccCCCcCCEEeCcCCccc
Q 011044 311 GKIPHEIGNLRKLEWLMLSHNKLV 334 (495)
Q Consensus 311 ~~~~~~l~~l~~L~~L~l~~n~l~ 334 (495)
. ++. ++.+.+++.|++++|.+.
T Consensus 269 ~-i~~-~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 269 S-ISS-LGSLTNLRELDLSGNSLS 290 (394)
T ss_pred c-ccc-ccccCccCEEeccCcccc
Confidence 2 211 444444445554444444
No 29
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.17 E-value=8.3e-13 Score=128.08 Aligned_cols=170 Identities=29% Similarity=0.487 Sum_probs=125.2
Q ss_pred EEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEEccc
Q 011044 58 AALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLFLKY 137 (495)
Q Consensus 58 ~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~l~~ 137 (495)
+..||+.|.+. .+|..+..|..|+.+.|.+|.+. .+|..+.++..|++|+|+.|++ ..+|..++. |+ |+.|.+++
T Consensus 78 ~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~Nql-S~lp~~lC~-lp-Lkvli~sN 152 (722)
T KOG0532|consen 78 VFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQL-SHLPDGLCD-LP-LKVLIVSN 152 (722)
T ss_pred hhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchh-hcCChhhhc-Cc-ceeEEEec
Confidence 44566666665 56666677777777777777776 6777778888888888888887 467777765 44 77888888
Q ss_pred ccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCCCcCc
Q 011044 138 NMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLTGTIP 217 (495)
Q Consensus 138 n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~ 217 (495)
|+++ .+|..++..+.|..|+.+.|.+. .+|..++++.+|+.|++..|.+. .+|+.+..+ .|..||+++|++. .+|
T Consensus 153 Nkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iP 227 (722)
T KOG0532|consen 153 NKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLP 227 (722)
T ss_pred Cccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecc
Confidence 8877 67777777777888888887776 56777777778888888777776 566666644 3777888888777 677
Q ss_pred hhhhcCCCCceeeCCCCcCC
Q 011044 218 SSIFSLSSLLNLDLSLNNFT 237 (495)
Q Consensus 218 ~~l~~l~~L~~L~Ls~n~l~ 237 (495)
..|.+|..|++|-|.+|.++
T Consensus 228 v~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 228 VDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred hhhhhhhhheeeeeccCCCC
Confidence 77778888888888877776
No 30
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.15 E-value=8e-12 Score=114.68 Aligned_cols=217 Identities=26% Similarity=0.295 Sum_probs=122.9
Q ss_pred CCeEEEEcCCCCCccc----Cc-------hhccCCCCCCEEeCcCCcCCccCCc----cccCCCCCcEEEccCCcccccC
Q 011044 55 HRVAALNISGLNLTGT----IP-------SELANLSSLQALDLSFNWFYGSIPS----SIFNMSSLLSIYFNNNTLFGEL 119 (495)
Q Consensus 55 ~~l~~L~L~~~~l~~~----~~-------~~l~~l~~L~~L~L~~n~l~~~~~~----~l~~l~~L~~L~l~~n~~~~~~ 119 (495)
+.++..++++. ++|. +| +.+..+|+|++|+||.|.+.-..+. -+.++..|++|.|.+|.+...-
T Consensus 58 ~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~a 136 (382)
T KOG1909|consen 58 KELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEA 136 (382)
T ss_pred ccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhH
Confidence 57888888764 2332 33 3556778999999999998754443 3557899999999999884222
Q ss_pred ChhHhhcCCCCCEEEcccccCCccCCcccCCCCCCCEEEcccCcCccc----cCccccCCCCCCEEEccCCCCCCC----
Q 011044 120 PPNFCNQMSNLESLFLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGT----IPKEIGNLTKLTRLNLRQNKLQGE---- 191 (495)
Q Consensus 120 p~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~---- 191 (495)
...+... |..|. .++ ...+-+.|+++...+|.+... +...|...+.|+.+.+..|.+...
T Consensus 137 g~~l~~a---l~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~a 204 (382)
T KOG1909|consen 137 GGRLGRA---LFELA--VNK-------KAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTA 204 (382)
T ss_pred HHHHHHH---HHHHH--HHh-------ccCCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHH
Confidence 2222221 11111 111 112235566666666665422 222344556667777766665421
Q ss_pred CChhhhCcccccEEEecCCcCCCc----CchhhhcCCCCceeeCCCCcCCCCCCccc-----ccccccceeeccCccccc
Q 011044 192 IPEELGNLAELEMLWLQNNSLTGT----IPSSIFSLSSLLNLDLSLNNFTGIIPSSI-----GNLSSLQKLYLSDNQLSG 262 (495)
Q Consensus 192 ~~~~l~~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l-----~~~~~L~~L~l~~n~l~~ 262 (495)
+...+..+++|+.|||..|.++.. +...+..+++|+.|++++|.+.......+ ...++|+.|.+.+|.++-
T Consensus 205 l~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~ 284 (382)
T KOG1909|consen 205 LAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITR 284 (382)
T ss_pred HHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHH
Confidence 223455667777777777766522 33445566777777777777664432222 234566666666666542
Q ss_pred cc----chhhhhCCcccccccccccee
Q 011044 263 EL----PANIGNNLPSLQTLSLYVNDF 285 (495)
Q Consensus 263 ~~----~~~~~~~l~~L~~L~L~~n~l 285 (495)
.. ...+. ..+.|..|+|++|.+
T Consensus 285 da~~~la~~~~-ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 285 DAALALAACMA-EKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHHHHHHHh-cchhhHHhcCCcccc
Confidence 21 11122 245566666666655
No 31
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.15 E-value=1.6e-12 Score=126.18 Aligned_cols=196 Identities=31% Similarity=0.499 Sum_probs=158.6
Q ss_pred CCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEEcccccCCccCCcccCCCCCCCE
Q 011044 77 NLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLFLKYNMFHGKIPSTLSSCKQLRE 156 (495)
Q Consensus 77 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 156 (495)
.+.--...+++.|++. .+|..+..+..|..+.+..|.+ -.+|..++. +..|+.|+|+.|+++ .+|..++.|+ |+.
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~-r~ip~~i~~-L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCI-RTIPEAICN-LEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccc-eecchhhhh-hhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 3455567788899887 8888888888899999999988 588888887 899999999999988 6788888877 899
Q ss_pred EEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCCCcCchhhhcCCCCceeeCCCCcC
Q 011044 157 LSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLTGTIPSSIFSLSSLLNLDLSLNNF 236 (495)
Q Consensus 157 L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l 236 (495)
|-+++|+++ .+|..++.+.+|..|+.+.|.+. .+|..++.+.+|+.|++..|++. .+|..+..+ .|..||++.|++
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNki 223 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKI 223 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCce
Confidence 999999988 78888998889999999999987 67888999999999999999887 677777744 588999999998
Q ss_pred CCCCCcccccccccceeeccCcccccccchhhhh--CCccccccccccc
Q 011044 237 TGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGN--NLPSLQTLSLYVN 283 (495)
Q Consensus 237 ~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~--~l~~L~~L~L~~n 283 (495)
. .+|-.|.+++.|++|.|.+|.+. .-|..+.. ...=.++|+...+
T Consensus 224 s-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 224 S-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred e-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 8 56777899999999999999987 44544321 1122455555555
No 32
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.15 E-value=1.1e-11 Score=111.23 Aligned_cols=133 Identities=32% Similarity=0.311 Sum_probs=85.5
Q ss_pred hhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCccccccccccceeeecccccccCCCCC
Q 011044 220 IFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSGAIPKEIGNLTKL 299 (495)
Q Consensus 220 l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 299 (495)
+...+.|++++|++|.|+. +..+..-.+.++.|++++|.+. .+.. +. .+++|+.|+|++|.++ .+..+-..+.+.
T Consensus 280 ~dTWq~LtelDLS~N~I~~-iDESvKL~Pkir~L~lS~N~i~-~v~n-La-~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNI 354 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLITQ-IDESVKLAPKLRRLILSQNRIR-TVQN-LA-ELPQLQLLDLSGNLLA-ECVGWHLKLGNI 354 (490)
T ss_pred cchHhhhhhccccccchhh-hhhhhhhccceeEEecccccee-eehh-hh-hcccceEeecccchhH-hhhhhHhhhcCE
Confidence 3344566677777776653 3344555567777777777665 2222 33 5677777777777665 333344456677
Q ss_pred CeeecccccccccCCccccCCCcCCEEeCcCCcccc-cCCcCccCCCCCcEEEccCCcCce
Q 011044 300 TDLYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLVG-VVPAPIFNLSTLISLQLHNNSLSG 359 (495)
Q Consensus 300 ~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~ 359 (495)
+.|.|++|.+.+. ..++.+-+|..|++++|+|.. .-...++++|-|+.+.+.+|++.+
T Consensus 355 KtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 355 KTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred eeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 7777777776532 345566677788888887654 223467888888888888888873
No 33
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.15 E-value=5.2e-12 Score=119.03 Aligned_cols=226 Identities=22% Similarity=0.205 Sum_probs=150.0
Q ss_pred EEEcCCCCCcccCchh----ccCCCCCCEEeCcCCcCCccCC-ccccCCCCCcEEEccCCcccccCC-hhHhhcCCCCCE
Q 011044 59 ALNISGLNLTGTIPSE----LANLSSLQALDLSFNWFYGSIP-SSIFNMSSLLSIYFNNNTLFGELP-PNFCNQMSNLES 132 (495)
Q Consensus 59 ~L~L~~~~l~~~~~~~----l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~~~~~~p-~~~~~~l~~L~~ 132 (495)
.+.+++..+.+..-+. =+++.+|+...|.++.+....- .....|++++.|+|++|-+..-.+ ..+...+|+|+.
T Consensus 97 ~~si~nK~vE~iGfDki~akQsn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~ 176 (505)
T KOG3207|consen 97 VLSISNKQVEFIGFDKIAAKQSNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLEN 176 (505)
T ss_pred HhhhcCceeEEecHHHHHHHhhhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchh
Confidence 3444554444332222 2467888888888887753221 345678889999999887754322 456667899999
Q ss_pred EEcccccCCccCCc-ccCCCCCCCEEEcccCcCccc-cCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCC
Q 011044 133 LFLKYNMFHGKIPS-TLSSCKQLRELSLSSNYFSGT-IPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNN 210 (495)
Q Consensus 133 L~l~~n~l~~~~~~-~l~~l~~L~~L~l~~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 210 (495)
|+++.|++...... .-..+++|+.|.++.|.++.. +..-+..+++|+.|++..|.....-......+..|+.|+|++|
T Consensus 177 LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N 256 (505)
T KOG3207|consen 177 LNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNN 256 (505)
T ss_pred cccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCC
Confidence 99999887532211 113567888999999888732 2223446788999999988533333344556778999999988
Q ss_pred cCCCc-CchhhhcCCCCceeeCCCCcCCCC-CCcc-----cccccccceeeccCcccccccc--hhhhhCCccccccccc
Q 011044 211 SLTGT-IPSSIFSLSSLLNLDLSLNNFTGI-IPSS-----IGNLSSLQKLYLSDNQLSGELP--ANIGNNLPSLQTLSLY 281 (495)
Q Consensus 211 ~l~~~-~~~~l~~l~~L~~L~Ls~n~l~~~-~~~~-----l~~~~~L~~L~l~~n~l~~~~~--~~~~~~l~~L~~L~L~ 281 (495)
.+-.. .....+.++.|+.|+++.+.+... .|+. ...+++|+.|++..|++. ..+ ..+. .+++|+.|.+.
T Consensus 257 ~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~-~w~sl~~l~-~l~nlk~l~~~ 334 (505)
T KOG3207|consen 257 NLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR-DWRSLNHLR-TLENLKHLRIT 334 (505)
T ss_pred cccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccc-cccccchhh-ccchhhhhhcc
Confidence 87522 124567788999999998887754 2222 245689999999999885 222 2233 56788888887
Q ss_pred cceee
Q 011044 282 VNDFS 286 (495)
Q Consensus 282 ~n~l~ 286 (495)
.|.+.
T Consensus 335 ~n~ln 339 (505)
T KOG3207|consen 335 LNYLN 339 (505)
T ss_pred ccccc
Confidence 77775
No 34
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.09 E-value=1.4e-10 Score=99.79 Aligned_cols=105 Identities=27% Similarity=0.377 Sum_probs=30.9
Q ss_pred CeEEEEcCCCCCcccCchhcc-CCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEE
Q 011044 56 RVAALNISGLNLTGTIPSELA-NLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLF 134 (495)
Q Consensus 56 ~l~~L~L~~~~l~~~~~~~l~-~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~ 134 (495)
++++|+|+++.|+.. ..++ .+.+|+.|++++|.|+. +. .+..+++|++|++++|.++ .++..+...+++|++|+
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEE
Confidence 567777777777633 3454 46677777777777763 22 3566677777777777764 34444433366777777
Q ss_pred cccccCCcc-CCcccCCCCCCCEEEcccCcCc
Q 011044 135 LKYNMFHGK-IPSTLSSCKQLRELSLSSNYFS 165 (495)
Q Consensus 135 l~~n~l~~~-~~~~l~~l~~L~~L~l~~n~l~ 165 (495)
+++|++... .-..+..+++|++|++.+|.++
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 777766531 1233445556666666655554
No 35
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.08 E-value=1e-10 Score=125.17 Aligned_cols=271 Identities=22% Similarity=0.220 Sum_probs=130.5
Q ss_pred CeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCc--CCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEE
Q 011044 56 RVAALNISGLNLTGTIPSELANLSSLQALDLSFNW--FYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESL 133 (495)
Q Consensus 56 ~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~--l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L 133 (495)
.++...+-++.+.-. +. -...+.|++|-+..|. +.......|..++.|++||+++|.-.+.+|..+.. +-+|++|
T Consensus 524 ~~rr~s~~~~~~~~~-~~-~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~-Li~LryL 600 (889)
T KOG4658|consen 524 SVRRMSLMNNKIEHI-AG-SSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGE-LVHLRYL 600 (889)
T ss_pred heeEEEEeccchhhc-cC-CCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhh-hhhhhcc
Confidence 455555555544311 11 1233456666666664 33222233555666777777766655666666665 6667777
Q ss_pred EcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCC--CCCCChhhhCcccccEEEecCCc
Q 011044 134 FLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKL--QGEIPEELGNLAELEMLWLQNNS 211 (495)
Q Consensus 134 ~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l--~~~~~~~l~~l~~L~~L~l~~n~ 211 (495)
+++++.+. .+|..++++..|.+|++..+.....+|..+..+.+|++|.+..... +...-..+.++.+|+.+......
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s 679 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISS 679 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecch
Confidence 77766666 5666666777777777666554434455455566777766654431 11122233444444444443222
Q ss_pred CCCcCchhhhcCCCCc----eeeCCCCcCCCCCCcccccccccceeeccCcccccccchh-----hhhCCcccccccccc
Q 011044 212 LTGTIPSSIFSLSSLL----NLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPAN-----IGNNLPSLQTLSLYV 282 (495)
Q Consensus 212 l~~~~~~~l~~l~~L~----~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~-----~~~~l~~L~~L~L~~ 282 (495)
. .+...+..+++|. .+.+.++... ..+..+..+.+|+.|.+.++.+....... ....++++..+...+
T Consensus 680 ~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~ 756 (889)
T KOG4658|consen 680 V--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILN 756 (889)
T ss_pred h--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhc
Confidence 1 1111122222222 2222222221 22334556666777777666554211100 000122333333333
Q ss_pred ceeeecccccccCCCCCCeeecccccccccCCccccCCCcCCEEeCcCCccc
Q 011044 283 NDFSGAIPKEIGNLTKLTDLYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLV 334 (495)
Q Consensus 283 n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~ 334 (495)
+... ..+.+..-.++|+.|.+..+.....+......+..+..+.+..+.+.
T Consensus 757 ~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~ 807 (889)
T KOG4658|consen 757 CHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLE 807 (889)
T ss_pred cccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccc
Confidence 3222 12223334567777777777655444444444444444444444443
No 36
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.06 E-value=1.4e-10 Score=124.29 Aligned_cols=275 Identities=23% Similarity=0.260 Sum_probs=170.5
Q ss_pred ccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcc-cccCChhHhhcCCCCCEEEcccccCCccCCcccCCCCC
Q 011044 75 LANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTL-FGELPPNFCNQMSNLESLFLKYNMFHGKIPSTLSSCKQ 153 (495)
Q Consensus 75 l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~-~~~~p~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 153 (495)
..+....+...+.+|.+. .++.. ..+++|++|-+.+|.. ...++..++..++.|+.|++++|.-.+.+|..++++-+
T Consensus 519 ~~~~~~~rr~s~~~~~~~-~~~~~-~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~ 596 (889)
T KOG4658|consen 519 VKSWNSVRRMSLMNNKIE-HIAGS-SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVH 596 (889)
T ss_pred ccchhheeEEEEeccchh-hccCC-CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhh
Confidence 344567788888888765 33332 3455899999988862 46777887877999999999988776789999999999
Q ss_pred CCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCC--CcCchhhhcCCCCceeeC
Q 011044 154 LRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLT--GTIPSSIFSLSSLLNLDL 231 (495)
Q Consensus 154 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~--~~~~~~l~~l~~L~~L~L 231 (495)
||+|+++++.+. .+|..++++..|.+|++..+.....+|.....+++|++|.+...... ......+.++.+|+.+..
T Consensus 597 LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~ 675 (889)
T KOG4658|consen 597 LRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSI 675 (889)
T ss_pred hhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhhee
Confidence 999999999888 78999999999999999888765556666677899999988765422 223334455566665555
Q ss_pred CCCcCCCCCCcccccccccc----eeeccCcccccccchhhhhCCccccccccccceeeecccccccC------CCCCCe
Q 011044 232 SLNNFTGIIPSSIGNLSSLQ----KLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSGAIPKEIGN------LTKLTD 301 (495)
Q Consensus 232 s~n~l~~~~~~~l~~~~~L~----~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~------l~~L~~ 301 (495)
..... .+...+..+..|. .+.+.++... ..+..+. .+.+|+.|.+..+.+.......... ++++..
T Consensus 676 ~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~-~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~ 751 (889)
T KOG4658|consen 676 TISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLG-SLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSK 751 (889)
T ss_pred ecchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccc-cccCcceEEEEcCCCchhhcccccccchhhhHHHHHH
Confidence 43322 0111122222332 2232222222 2233333 6788888888888775433222111 223333
Q ss_pred eecccccccccCCccccCCCcCCEEeCcCCcccccCCcCccCCCCCcEEEccCCcC
Q 011044 302 LYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLVGVVPAPIFNLSTLISLQLHNNSL 357 (495)
Q Consensus 302 L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 357 (495)
+...++... ..+.+....++|+.|++.+++....+......+..+..+-+..+.+
T Consensus 752 ~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~ 806 (889)
T KOG4658|consen 752 VSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKL 806 (889)
T ss_pred HHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEeccccc
Confidence 333333322 2233334668899999998876554444444444444433444433
No 37
>PLN03150 hypothetical protein; Provisional
Probab=99.06 E-value=3.7e-10 Score=118.37 Aligned_cols=109 Identities=33% Similarity=0.507 Sum_probs=98.1
Q ss_pred CCcEEEccCCcccccCChhHhhcCCCCCEEEcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEc
Q 011044 104 SLLSIYFNNNTLFGELPPNFCNQMSNLESLFLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNL 183 (495)
Q Consensus 104 ~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 183 (495)
.++.|+|++|.+.+.+|..+.. +++|+.|+|++|.+.+.+|..++.+++|+.|++++|.+.+.+|..++.+++|++|+|
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~-L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISK-LRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhC-CCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEEC
Confidence 4788999999999999998876 999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCChhhhCc-ccccEEEecCCcCC
Q 011044 184 RQNKLQGEIPEELGNL-AELEMLWLQNNSLT 213 (495)
Q Consensus 184 ~~n~l~~~~~~~l~~l-~~L~~L~l~~n~l~ 213 (495)
++|.+++.+|..+... .++..+++.+|...
T Consensus 498 s~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred cCCcccccCChHHhhccccCceEEecCCccc
Confidence 9999999999988764 46778888888644
No 38
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.03 E-value=8.5e-11 Score=105.70 Aligned_cols=142 Identities=25% Similarity=0.241 Sum_probs=109.5
Q ss_pred ccccccccceeeccCcccccccchhhhhCCccccccccccceeeecccccccCCCCCCeeecccccccccCCccccCCCc
Q 011044 243 SIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSGAIPKEIGNLTKLTDLYLDQNKLQGKIPHEIGNLRK 322 (495)
Q Consensus 243 ~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~ 322 (495)
.+..+..|+++++++|.++ .+....- -.|.++.|++++|.+... ..+..+++|+.|||++|.++ .+..+-..+-+
T Consensus 279 ~~dTWq~LtelDLS~N~I~-~iDESvK-L~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGN 353 (490)
T KOG1259|consen 279 SADTWQELTELDLSGNLIT-QIDESVK-LAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGN 353 (490)
T ss_pred ecchHhhhhhccccccchh-hhhhhhh-hccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcC
Confidence 3445678999999999987 6665554 578999999999999733 34888999999999999887 44455557788
Q ss_pred CCEEeCcCCcccccCCcCccCCCCCcEEEccCCcCceecCCCCCCCCCChhhhhhhhcCCCccccCCCc
Q 011044 323 LEWLMLSHNKLVGVVPAPIFNLSTLISLQLHNNSLSGSLPSSADVPLPNLEELFLWEYGREGRVSTNGD 391 (495)
Q Consensus 323 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~d 391 (495)
.+.|.+++|.+.. ...++.+-+|..||+++|+|..--.......+|.|+.+.+.+|+..+.+..+..
T Consensus 354 IKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdYRTK 420 (490)
T KOG1259|consen 354 IKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDYRTK 420 (490)
T ss_pred EeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchHHHH
Confidence 9999999998863 345778889999999999987322222345799999999999998776654443
No 39
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.98 E-value=5.1e-10 Score=96.41 Aligned_cols=9 Identities=56% Similarity=0.910 Sum_probs=3.0
Q ss_pred CCccccccc
Q 011044 271 NLPSLQTLS 279 (495)
Q Consensus 271 ~l~~L~~L~ 279 (495)
.+|+|+.|+
T Consensus 138 ~lP~Lk~LD 146 (175)
T PF14580_consen 138 KLPSLKVLD 146 (175)
T ss_dssp H-TT-SEET
T ss_pred HcChhheeC
Confidence 344444443
No 40
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.83 E-value=5e-10 Score=112.22 Aligned_cols=173 Identities=34% Similarity=0.351 Sum_probs=70.7
Q ss_pred cCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCCCcCc-hhhhcCCCC
Q 011044 148 LSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLTGTIP-SSIFSLSSL 226 (495)
Q Consensus 148 l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L 226 (495)
+..+++|++|++++|.|+.. ..+..++.|+.|++++|.+... ..+..++.|+.+++++|.+...-+ . +..+.++
T Consensus 114 l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l 188 (414)
T KOG0531|consen 114 LSSLVNLQVLDLSFNKITKL--EGLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISL 188 (414)
T ss_pred hhhhhcchheeccccccccc--cchhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccch
Confidence 33444444444444444422 1233334444444444444311 123334444444444444442211 1 2344455
Q ss_pred ceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCc--cccccccccceeeecccccccCCCCCCeeec
Q 011044 227 LNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLP--SLQTLSLYVNDFSGAIPKEIGNLTKLTDLYL 304 (495)
Q Consensus 227 ~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~--~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 304 (495)
+.+.+.+|.+... ..+..+..+..+++..|.++..-+.. .+. .|+.+++++|.+. ..+..+..+..+..|++
T Consensus 189 ~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~~~~l~---~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~ 262 (414)
T KOG0531|consen 189 EELDLGGNSIREI--EGLDLLKKLVLLSLLDNKISKLEGLN---ELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDL 262 (414)
T ss_pred HHHhccCCchhcc--cchHHHHHHHHhhcccccceeccCcc---cchhHHHHHHhcccCccc-cccccccccccccccch
Confidence 5555555544322 11222233333344444443111100 111 2555555555554 22234445555556666
Q ss_pred ccccccccCCccccCCCcCCEEeCcCCcc
Q 011044 305 DQNKLQGKIPHEIGNLRKLEWLMLSHNKL 333 (495)
Q Consensus 305 ~~n~i~~~~~~~l~~l~~L~~L~l~~n~l 333 (495)
.+|++... ..+.....+..+....+.+
T Consensus 263 ~~n~~~~~--~~~~~~~~~~~~~~~~~~~ 289 (414)
T KOG0531|consen 263 SSNRISNL--EGLERLPKLSELWLNDNKL 289 (414)
T ss_pred hhcccccc--ccccccchHHHhccCcchh
Confidence 65555432 1123344444444444443
No 41
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.80 E-value=8.5e-10 Score=110.58 Aligned_cols=217 Identities=31% Similarity=0.375 Sum_probs=150.0
Q ss_pred CCCCCEEEcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCChhhhCcccccEEE
Q 011044 127 MSNLESLFLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPEELGNLAELEMLW 206 (495)
Q Consensus 127 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 206 (495)
+..++.+.+..|.+.. +-..+..+.+|..|++.+|.+... ...+..+++|++|++++|.|+... .+..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhhe
Confidence 5566666677777663 334477888999999999988843 222677899999999999988543 367777899999
Q ss_pred ecCCcCCCcCchhhhcCCCCceeeCCCCcCCCCCC-cccccccccceeeccCcccccccchhhhhCCcccccccccccee
Q 011044 207 LQNNSLTGTIPSSIFSLSSLLNLDLSLNNFTGIIP-SSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDF 285 (495)
Q Consensus 207 l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~-~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l 285 (495)
+++|.++.. ..+..++.|+.+++++|.+....+ . +..+.+++.+.+.+|.+...-... .+..+..+++..|.+
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~~~---~~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIEGLD---LLKKLVLLSLLDNKI 220 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcccchH---HHHHHHHhhcccccc
Confidence 999998733 445568899999999998876544 2 467788888899888776221111 234555557777777
Q ss_pred eecccccccCCCC--CCeeecccccccccCCccccCCCcCCEEeCcCCcccccCCcCccCCCCCcEEEccCCcCc
Q 011044 286 SGAIPKEIGNLTK--LTDLYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLVGVVPAPIFNLSTLISLQLHNNSLS 358 (495)
Q Consensus 286 ~~~~~~~l~~l~~--L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 358 (495)
+..- .+..+.. |+.+++++|++. ..+..+..+..+..|++..|++...- .+...+.+..+....+.+.
T Consensus 221 ~~~~--~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 221 SKLE--GLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLA 290 (414)
T ss_pred eecc--CcccchhHHHHHHhcccCccc-cccccccccccccccchhhccccccc--cccccchHHHhccCcchhc
Confidence 5322 2223333 788889988887 33355667888888888888776432 2344556666666666654
No 42
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.76 E-value=1e-08 Score=66.42 Aligned_cols=40 Identities=50% Similarity=1.020 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHhhCCCCCCccccCCCCCC--CCCCccceeeeC
Q 011044 11 TTDQQALLVLKAHVTDDPTNFLAKNWNTS--SSFCYWTGVTCD 51 (495)
Q Consensus 11 ~~~~~~ll~~~~~~~~~~~~~l~~~w~~~--~~~c~w~gv~c~ 51 (495)
++|++||++||+++..+|.+.+. +|+.+ .++|.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~-~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLS-SWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCT-T--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccc-cCCCcCCCCCeeeccEEeC
Confidence 57999999999999666767777 99987 799999999995
No 43
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.73 E-value=1.1e-08 Score=72.26 Aligned_cols=59 Identities=31% Similarity=0.432 Sum_probs=39.4
Q ss_pred CeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCc
Q 011044 56 RVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNT 114 (495)
Q Consensus 56 ~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 114 (495)
+|++|++++|.++...+..|.++++|++|++++|.++...+..|.++++|++|++++|.
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 56667777777765555566667777777777777665556666666666666666665
No 44
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.68 E-value=1.7e-08 Score=71.33 Aligned_cols=61 Identities=41% Similarity=0.507 Sum_probs=41.6
Q ss_pred CCCCeeecccccccccCCccccCCCcCCEEeCcCCcccccCCcCccCCCCCcEEEccCCcC
Q 011044 297 TKLTDLYLDQNKLQGKIPHEIGNLRKLEWLMLSHNKLVGVVPAPIFNLSTLISLQLHNNSL 357 (495)
Q Consensus 297 ~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 357 (495)
|+|++|++++|+++...+..|..+++|++|++++|++....+..|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4566777777776655555666777777777777777666666677777777777777654
No 45
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.62 E-value=6.7e-09 Score=93.61 Aligned_cols=88 Identities=25% Similarity=0.289 Sum_probs=45.4
Q ss_pred HhhcCCCCCEEEcccccCCc--cCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCC-CChhhhCc
Q 011044 123 FCNQMSNLESLFLKYNMFHG--KIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGE-IPEELGNL 199 (495)
Q Consensus 123 ~~~~l~~L~~L~l~~n~l~~--~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~l~~l 199 (495)
+...++.++.++|.+|.++. .+...+.++|+|++|+++.|++...+...-....+|+.|.|.+..+... ....+..+
T Consensus 66 ~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~l 145 (418)
T KOG2982|consen 66 FGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDL 145 (418)
T ss_pred HHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcc
Confidence 33446666667777666654 2334455666666666666666533222112344566666655544322 11223445
Q ss_pred ccccEEEecCC
Q 011044 200 AELEMLWLQNN 210 (495)
Q Consensus 200 ~~L~~L~l~~n 210 (495)
|.++.|.++.|
T Consensus 146 P~vtelHmS~N 156 (418)
T KOG2982|consen 146 PKVTELHMSDN 156 (418)
T ss_pred hhhhhhhhccc
Confidence 55555555554
No 46
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.58 E-value=1.2e-09 Score=98.36 Aligned_cols=177 Identities=22% Similarity=0.222 Sum_probs=107.5
Q ss_pred CCCEEEccCCCCCCC-CChhhhCcccccEEEecCCcCCCcCchhhhcCCCCceeeCCCCc-CCCC-CCccccccccccee
Q 011044 177 KLTRLNLRQNKLQGE-IPEELGNLAELEMLWLQNNSLTGTIPSSIFSLSSLLNLDLSLNN-FTGI-IPSSIGNLSSLQKL 253 (495)
Q Consensus 177 ~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~-l~~~-~~~~l~~~~~L~~L 253 (495)
.|++|||+...++.. .-.-++.+.+|+.|.+.++++...+...++...+|+.|+++.+. ++.. ....+.+|+.|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 477788877766521 12234567778888888888877777777777888888887764 2211 11235677788888
Q ss_pred eccCcccccccchhh-hhCCcccccccccccee--e-ecccccccCCCCCCeeeccccc-ccccCCccccCCCcCCEEeC
Q 011044 254 YLSDNQLSGELPANI-GNNLPSLQTLSLYVNDF--S-GAIPKEIGNLTKLTDLYLDQNK-LQGKIPHEIGNLRKLEWLML 328 (495)
Q Consensus 254 ~l~~n~l~~~~~~~~-~~~l~~L~~L~L~~n~l--~-~~~~~~l~~l~~L~~L~L~~n~-i~~~~~~~l~~l~~L~~L~l 328 (495)
++++|.+.......+ ..--++|+.|+++++.- . ..+..-...+++|..|||++|. ++......|-.++.|++|.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 888876653332222 11225677777777632 1 1122223566778888887764 33333345566777888888
Q ss_pred cCCcccccCCc---CccCCCCCcEEEccCC
Q 011044 329 SHNKLVGVVPA---PIFNLSTLISLQLHNN 355 (495)
Q Consensus 329 ~~n~l~~~~~~---~~~~l~~L~~L~l~~n 355 (495)
+.|.. .+|. .+...|+|.+|++.++
T Consensus 346 sRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 346 SRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 77753 2332 3456677777777665
No 47
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.53 E-value=1.9e-09 Score=97.09 Aligned_cols=202 Identities=23% Similarity=0.230 Sum_probs=134.4
Q ss_pred CCeEEEEcCCCCCccc-CchhccCC-CCCCEEeCcCCcCCcc-CCccccCCCCCcEEEccCCcccccCChhHhhcCCCCC
Q 011044 55 HRVAALNISGLNLTGT-IPSELANL-SSLQALDLSFNWFYGS-IPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLE 131 (495)
Q Consensus 55 ~~l~~L~L~~~~l~~~-~~~~l~~l-~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~ 131 (495)
..|..+.+...-.... +.+.+.-+ +.|++|||+...|+.. .-.-+..|.+|+.|.+.++.+.+.+...+.. -.+|+
T Consensus 159 rgV~v~Rlar~~~~~prlae~~~~frsRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAk-N~~L~ 237 (419)
T KOG2120|consen 159 RGVIVFRLARSFMDQPRLAEHFSPFRSRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAK-NSNLV 237 (419)
T ss_pred CCeEEEEcchhhhcCchhhhhhhhhhhhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhc-cccce
Confidence 5677777764433322 22333322 3588899988877643 2234677889999999999888777777766 78899
Q ss_pred EEEccccc-CCcc-CCcccCCCCCCCEEEcccCcCccccCcc-cc-CCCCCCEEEccCCCCC---CCCChhhhCcccccE
Q 011044 132 SLFLKYNM-FHGK-IPSTLSSCKQLRELSLSSNYFSGTIPKE-IG-NLTKLTRLNLRQNKLQ---GEIPEELGNLAELEM 204 (495)
Q Consensus 132 ~L~l~~n~-l~~~-~~~~l~~l~~L~~L~l~~n~l~~~~~~~-l~-~l~~L~~L~L~~n~l~---~~~~~~l~~l~~L~~ 204 (495)
.|+++.+. ++.. ..-.+.+|+.|..|+++.|.+....... +. --++|+.|+++++.-. ..+..-...+++|..
T Consensus 238 ~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~ 317 (419)
T KOG2120|consen 238 RLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVH 317 (419)
T ss_pred eeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceee
Confidence 99998874 4421 2224578889999999988765332211 11 1257888899887421 112222357899999
Q ss_pred EEecCCc-CCCcCchhhhcCCCCceeeCCCCcCCCCCCc---ccccccccceeeccCcc
Q 011044 205 LWLQNNS-LTGTIPSSIFSLSSLLNLDLSLNNFTGIIPS---SIGNLSSLQKLYLSDNQ 259 (495)
Q Consensus 205 L~l~~n~-l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~---~l~~~~~L~~L~l~~n~ 259 (495)
||++.|. ++......|.+++.|++|.++.|.. ++|. .+...+.|.+|++.++-
T Consensus 318 LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g~v 374 (419)
T KOG2120|consen 318 LDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVFGCV 374 (419)
T ss_pred eccccccccCchHHHHHHhcchheeeehhhhcC--CChHHeeeeccCcceEEEEecccc
Confidence 9999864 4444456678899999999999863 3443 35677899999988763
No 48
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.53 E-value=3e-09 Score=106.56 Aligned_cols=126 Identities=33% Similarity=0.426 Sum_probs=74.6
Q ss_pred CCCEEEcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCCCCCh-hhhCcccccEEEe
Q 011044 129 NLESLFLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQGEIPE-ELGNLAELEMLWL 207 (495)
Q Consensus 129 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~l 207 (495)
.|.+.++++|.+. .+..++.-++.|+.|+|++|+++.. ..+..+++|++|||++|.+. .+|. ....+. |+.|++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 3555566666665 4445566666777777777777633 35666777777777777665 3332 122333 677777
Q ss_pred cCCcCCCcCchhhhcCCCCceeeCCCCcCCCCC-CcccccccccceeeccCcccc
Q 011044 208 QNNSLTGTIPSSIFSLSSLLNLDLSLNNFTGII-PSSIGNLSSLQKLYLSDNQLS 261 (495)
Q Consensus 208 ~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~-~~~l~~~~~L~~L~l~~n~l~ 261 (495)
++|.++. -..+.++.+|+.||+++|-+.+.- -..++.+..|+.|+|.+|.+.
T Consensus 240 rnN~l~t--L~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTT--LRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHh--hhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 7776652 234566667777777777655431 122445566667777776654
No 49
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=98.46 E-value=2.1e-07 Score=90.85 Aligned_cols=93 Identities=24% Similarity=0.293 Sum_probs=71.1
Q ss_pred hhhhhcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhH
Q 011044 375 LFLWEYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQC 453 (495)
Q Consensus 375 L~l~~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~ 453 (495)
...+|....++.+.|+|||||||+|.|++| |+.|. ++++..+.++..-++.-+. ..+.|
T Consensus 370 WtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py-----~~msn~ev~~~le~GyRlp---------------~P~~C 429 (468)
T KOG0197|consen 370 WTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPY-----PGMSNEEVLELLERGYRLP---------------RPEGC 429 (468)
T ss_pred ecCHHHHhhCCcccccceeehhhhHHHHhccCCCCC-----CCCCHHHHHHHHhccCcCC---------------CCCCC
Confidence 345677788899999999999999999998 45553 4677777666554433111 13357
Q ss_pred HHHHHHHHhhcCCCCccCchhHHHHHHHHHHHHH
Q 011044 454 MSFVFNLAMECTVESPIRESTQRKLLQDSQKLET 487 (495)
Q Consensus 454 ~~~~~~~~~~C~~~~p~~Rp~m~~v~~~l~~i~~ 487 (495)
...+.+|-..|..++|.+|||+......++++..
T Consensus 430 P~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 430 PDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred CHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 8889999999999999999999988777777654
No 50
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.41 E-value=8.1e-09 Score=103.52 Aligned_cols=180 Identities=27% Similarity=0.281 Sum_probs=107.5
Q ss_pred ChhhhCcccccEEEecCCcCCCcCchhhhcCC-CCceeeCCCCcCC----------CCCCcccccccccceeeccCcccc
Q 011044 193 PEELGNLAELEMLWLQNNSLTGTIPSSIFSLS-SLLNLDLSLNNFT----------GIIPSSIGNLSSLQKLYLSDNQLS 261 (495)
Q Consensus 193 ~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~-~L~~L~Ls~n~l~----------~~~~~~l~~~~~L~~L~l~~n~l~ 261 (495)
|-.+..+.+|+.|.+.++.+.. ...+..+. .|++|.-.+ .+. |.+..++ .+..|...+.++|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~~-Sl~Al~~v~ascggd~~ns~-~Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICHN-SLDALRHVFASCGGDISNSP-VWNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhhc-cHHHHHHHHHHhccccccch-hhhhHhhhhcchhhHH
Confidence 5567788899999999998762 22222222 344442221 111 1111111 1235667777777775
Q ss_pred cccchhhhhCCccccccccccceeeecccccccCCCCCCeeecccccccccCCc-cccCCCcCCEEeCcCCcccccCCcC
Q 011044 262 GELPANIGNNLPSLQTLSLYVNDFSGAIPKEIGNLTKLTDLYLDQNKLQGKIPH-EIGNLRKLEWLMLSHNKLVGVVPAP 340 (495)
Q Consensus 262 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~ 340 (495)
.+...+- -++.++.|+|++|+++.. ..+..+++|++|||++|.++ .+|. ....|. |..|.+++|.++.. ..
T Consensus 178 -~mD~SLq-ll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~tL--~g 249 (1096)
T KOG1859|consen 178 -LMDESLQ-LLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALTTL--RG 249 (1096)
T ss_pred -hHHHHHH-HHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeeecccHHHhh--hh
Confidence 3434333 467888888888888643 36778888888888888877 3443 223344 88888888877632 34
Q ss_pred ccCCCCCcEEEccCCcCceecCCCCCCCCCChhhhhhhhcCCCc
Q 011044 341 IFNLSTLISLQLHNNSLSGSLPSSADVPLPNLEELFLWEYGREG 384 (495)
Q Consensus 341 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~~~~~~ 384 (495)
+.++.+|+.||+++|-+.+.-.......+..|+.|.+.+|+.-+
T Consensus 250 ie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 250 IENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred HHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 66788888888888877644322222334556666665555433
No 51
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.37 E-value=1.6e-07 Score=83.80 Aligned_cols=138 Identities=25% Similarity=0.244 Sum_probs=83.3
Q ss_pred CCCCCCEEEccCCCCCCCCC----hhhhCcccccEEEecCCcCCCc-----CchhhhcCCCCceeeCCCCcCCCC----C
Q 011044 174 NLTKLTRLNLRQNKLQGEIP----EELGNLAELEMLWLQNNSLTGT-----IPSSIFSLSSLLNLDLSLNNFTGI----I 240 (495)
Q Consensus 174 ~l~~L~~L~L~~n~l~~~~~----~~l~~l~~L~~L~l~~n~l~~~-----~~~~l~~l~~L~~L~Ls~n~l~~~----~ 240 (495)
.-+.|+......|++..-.. ..+..-.+|+.+.+..|.|... +...++.+.+|+.|++..|.++-. +
T Consensus 155 ~kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~L 234 (388)
T COG5238 155 DKPKLEVVICGRNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYL 234 (388)
T ss_pred cCCCceEEEeccchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHH
Confidence 34677777777777652211 1223335677788877776532 112344567888888888876632 2
Q ss_pred CcccccccccceeeccCcccccccchhhhh-----CCccccccccccceeeeccccc-------ccCCCCCCeeeccccc
Q 011044 241 PSSIGNLSSLQKLYLSDNQLSGELPANIGN-----NLPSLQTLSLYVNDFSGAIPKE-------IGNLTKLTDLYLDQNK 308 (495)
Q Consensus 241 ~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~-----~l~~L~~L~L~~n~l~~~~~~~-------l~~l~~L~~L~L~~n~ 308 (495)
...+..++.|+.|.+.+|-++......+.. ..|+|..|...+|...+.+... -..+|-|..|.+.+|+
T Consensus 235 a~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr 314 (388)
T COG5238 235 ADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNR 314 (388)
T ss_pred HHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCc
Confidence 233456677888888888766444433322 3467788888877654322211 1445677778888888
Q ss_pred ccc
Q 011044 309 LQG 311 (495)
Q Consensus 309 i~~ 311 (495)
+..
T Consensus 315 ~~E 317 (388)
T COG5238 315 IKE 317 (388)
T ss_pred chh
Confidence 763
No 52
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.36 E-value=1.9e-07 Score=83.31 Aligned_cols=189 Identities=24% Similarity=0.205 Sum_probs=119.5
Q ss_pred ccCCCCCCCEEEcccCcCccccCcc----ccCCCCCCEEEccCCCCCCC----CChh---------hhCcccccEEEecC
Q 011044 147 TLSSCKQLRELSLSSNYFSGTIPKE----IGNLTKLTRLNLRQNKLQGE----IPEE---------LGNLAELEMLWLQN 209 (495)
Q Consensus 147 ~l~~l~~L~~L~l~~n~l~~~~~~~----l~~l~~L~~L~L~~n~l~~~----~~~~---------l~~l~~L~~L~l~~ 209 (495)
.+-+||+|+..+|+.|.+....|.. ++.-+.|.+|.+++|.+.-. +-.+ ..+-|.|+......
T Consensus 87 aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgr 166 (388)
T COG5238 87 ALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGR 166 (388)
T ss_pred HHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEecc
Confidence 3456677777777777666544433 34456677777777765411 1111 22446799999998
Q ss_pred CcCCCcCc----hhhhcCCCCceeeCCCCcCCCCC-----CcccccccccceeeccCcccccccchhhh---hCCccccc
Q 011044 210 NSLTGTIP----SSIFSLSSLLNLDLSLNNFTGII-----PSSIGNLSSLQKLYLSDNQLSGELPANIG---NNLPSLQT 277 (495)
Q Consensus 210 n~l~~~~~----~~l~~l~~L~~L~Ls~n~l~~~~-----~~~l~~~~~L~~L~l~~n~l~~~~~~~~~---~~l~~L~~ 277 (495)
|++..-.. ..+..-.+|+++.+..|.|.... -..+..+.+|+.|++.+|.++-.....++ ...+.|+.
T Consensus 167 NRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrE 246 (388)
T COG5238 167 NRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRE 246 (388)
T ss_pred chhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhh
Confidence 88762211 12223358999999999876431 12345678999999999988744333222 24567899
Q ss_pred cccccceeeeccccc----c--cCCCCCCeeecccccccccCCcc-------ccCCCcCCEEeCcCCcccc
Q 011044 278 LSLYVNDFSGAIPKE----I--GNLTKLTDLYLDQNKLQGKIPHE-------IGNLRKLEWLMLSHNKLVG 335 (495)
Q Consensus 278 L~L~~n~l~~~~~~~----l--~~l~~L~~L~L~~n~i~~~~~~~-------l~~l~~L~~L~l~~n~l~~ 335 (495)
|.+..|-++...... + ...|+|..|-..+|.+.+.+... -..++-|..|.+.+|++..
T Consensus 247 L~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~E 317 (388)
T COG5238 247 LRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIKE 317 (388)
T ss_pred ccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcchh
Confidence 999999876533322 1 33578889999998776532221 1356778888888898763
No 53
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.31 E-value=1.8e-07 Score=84.53 Aligned_cols=186 Identities=23% Similarity=0.209 Sum_probs=90.5
Q ss_pred CCCCCCEEEccCCCCCC--CCChhhhCcccccEEEecCCcCCCcCchhhhcCCCCceeeCCCCcCCCC-CCccccccccc
Q 011044 174 NLTKLTRLNLRQNKLQG--EIPEELGNLAELEMLWLQNNSLTGTIPSSIFSLSSLLNLDLSLNNFTGI-IPSSIGNLSSL 250 (495)
Q Consensus 174 ~l~~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~-~~~~l~~~~~L 250 (495)
.++.++.++|.+|.++. .+...+.++|.|++|+++.|++...+...-....+|+.|.|.+..+.-. ....+..++.+
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~v 148 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKV 148 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhh
Confidence 34667777777777662 2223345777777777777777633222113455677777766554321 22334556666
Q ss_pred ceeeccCccccc--ccchhhhhCCccccccccccceeee--cccccccCCCCCCeeeccccccccc-CCccccCCCcCCE
Q 011044 251 QKLYLSDNQLSG--ELPANIGNNLPSLQTLSLYVNDFSG--AIPKEIGNLTKLTDLYLDQNKLQGK-IPHEIGNLRKLEW 325 (495)
Q Consensus 251 ~~L~l~~n~l~~--~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~L~~n~i~~~-~~~~l~~l~~L~~ 325 (495)
++|.++.|.+.- .........-+.+++|+...|...- .....-.-+|++..+.+..|++.+. ....+..++.+..
T Consensus 149 telHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~ 228 (418)
T KOG2982|consen 149 TELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSC 228 (418)
T ss_pred hhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchh
Confidence 777776663320 0011111111233444433332210 0001112245566666666655432 1123344555556
Q ss_pred EeCcCCccccc-CCcCccCCCCCcEEEccCCcCce
Q 011044 326 LMLSHNKLVGV-VPAPIFNLSTLISLQLHNNSLSG 359 (495)
Q Consensus 326 L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~ 359 (495)
|+|+.+++... ....+..++.|..|.++++++..
T Consensus 229 LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 229 LNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred hhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 66666655431 11234456666666666666553
No 54
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.27 E-value=9e-07 Score=77.62 Aligned_cols=95 Identities=17% Similarity=0.207 Sum_probs=58.0
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|||||||++.|++||+.|......-...+..++....+.... +... . ........+.++..
T Consensus 78 ~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~-----~~~~~~~~~~~~i~ 146 (176)
T smart00750 78 GQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPR---DRSN---L-----ESVSAARSFADFMR 146 (176)
T ss_pred CCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcc---cccc---H-----HHHHhhhhHHHHHH
Confidence 44556789999999999999999999643221111222222211111000 0000 0 00011124788999
Q ss_pred hcCCCCccCchhHHHHHHHHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQDSQKLETR 488 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~l~~i~~~ 488 (495)
.|...+|.+||++.|+++.+..+..+
T Consensus 147 ~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 147 VCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred HHHhcccccccCHHHHHHHHHHHHHH
Confidence 99999999999999999888766544
No 55
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=98.27 E-value=5.7e-07 Score=87.34 Aligned_cols=89 Identities=15% Similarity=0.343 Sum_probs=61.6
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.|+|||||||++-|++||+.|+..... .+-+......+. .+.+ ...|...+..+..
T Consensus 220 ~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-----~~~~~~v~~~~~----Rp~~----------p~~~~~~l~~l~~ 280 (362)
T KOG0192|consen 220 KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-----VQVASAVVVGGL----RPPI----------PKECPPHLSSLME 280 (362)
T ss_pred CCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhcCC----CCCC----------CccCCHHHHHHHH
Confidence 45688999999999999999999999654332 121111111110 0000 1124555777778
Q ss_pred hcCCCCccCchhHHHHHHHHHHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQDSQKLETRCL 490 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~l~~i~~~~~ 490 (495)
.|...+|..||++.+++..|+.+...+.
T Consensus 281 ~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 281 RCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred HhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 8999999999999999999999876554
No 56
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.20 E-value=6e-07 Score=85.36 Aligned_cols=99 Identities=15% Similarity=0.241 Sum_probs=59.3
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhC-CCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLS-ISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~-~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.++||||||+++.|++||+.|....-..-.....+...... ....+..+..... .....+...+.++
T Consensus 183 ~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l 256 (283)
T cd05080 183 KENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRL------PCPKNCPQEVYIL 256 (283)
T ss_pred cccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCC------CCCCCCCHHHHHH
Confidence 34556789999999999999999998854311100000000000000 0011111111100 0012345568899
Q ss_pred HhhcCCCCccCchhHHHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
...|.+.+|.+||+|.+++++|+.++
T Consensus 257 i~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 257 MKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred HHHHhccChhhCCCHHHHHHHHHHhh
Confidence 99999999999999999999998875
No 57
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=98.19 E-value=1.3e-06 Score=82.97 Aligned_cols=90 Identities=21% Similarity=0.339 Sum_probs=59.0
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCCCC----------CHHHHHHHHhCCCcceeeeccccccccccccchh
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEM----------TLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKE 451 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~----------~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~ 451 (495)
.....+.++|+||||+++.|++||+.|......... ....+++..-... +. ....
T Consensus 185 ~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--------~~~~ 249 (284)
T cd05038 185 RTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGE-------RL--------PRPP 249 (284)
T ss_pred ccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCC-------cC--------CCCc
Confidence 344667789999999999999999988653221111 1111111111100 00 0111
Q ss_pred hHHHHHHHHHhhcCCCCccCchhHHHHHHHHHHHH
Q 011044 452 QCMSFVFNLAMECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 452 ~~~~~~~~~~~~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
.+...+.++...|...+|.+||+|.||+++|+.|+
T Consensus 250 ~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 250 SCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred cCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 33456889999999999999999999999998763
No 58
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.18 E-value=1.2e-07 Score=75.94 Aligned_cols=104 Identities=26% Similarity=0.330 Sum_probs=53.4
Q ss_pred CEEeCcCCcCCccCCc---cccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEEcccccCCccCCcccCCCCCCCEEE
Q 011044 82 QALDLSFNWFYGSIPS---SIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLFLKYNMFHGKIPSTLSSCKQLRELS 158 (495)
Q Consensus 82 ~~L~L~~n~l~~~~~~---~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 158 (495)
-.++|++|++. .+++ .+.....|+..++++|.+ ..+|..+....+.+++|++++|.++ .+|..+..++.|+.|+
T Consensus 30 h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~f-k~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 30 HFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGF-KKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhcccccchhh-HHHHHHHHHhCCceEEEEecccchh-hhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 34455555443 2222 233334455556666655 4555555554555666666666555 4455555555555555
Q ss_pred cccCcCccccCccccCCCCCCEEEccCCCCC
Q 011044 159 LSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQ 189 (495)
Q Consensus 159 l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 189 (495)
++.|.+. ..|..+..+.++-+|+..+|.+.
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 5555554 34444444555555555555443
No 59
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.17 E-value=6.8e-08 Score=91.23 Aligned_cols=293 Identities=20% Similarity=0.120 Sum_probs=160.5
Q ss_pred CCCEEeCcCCcCCcc--CCccccCCCCCcEEEccCCcc-cccCChhHhhcCCCCCEEEccccc-CCccCCc-ccCCCCCC
Q 011044 80 SLQALDLSFNWFYGS--IPSSIFNMSSLLSIYFNNNTL-FGELPPNFCNQMSNLESLFLKYNM-FHGKIPS-TLSSCKQL 154 (495)
Q Consensus 80 ~L~~L~L~~n~l~~~--~~~~l~~l~~L~~L~l~~n~~-~~~~p~~~~~~l~~L~~L~l~~n~-l~~~~~~-~l~~l~~L 154 (495)
.|+.|.++++.-.+. .-....+++++++|.+.++.. ++..-..+...+++|++|++..|. ++..... .-..+++|
T Consensus 139 ~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL 218 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKL 218 (483)
T ss_pred ccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhH
Confidence 466677766643222 112344577777777777642 333334555567777777777643 3332222 22456777
Q ss_pred CEEEcccCc-Cccc-cCccccCCCCCCEEEccCCCCCCCCChhh----hCcccccEEEecCCc-CCCcCc-hhhhcCCCC
Q 011044 155 RELSLSSNY-FSGT-IPKEIGNLTKLTRLNLRQNKLQGEIPEEL----GNLAELEMLWLQNNS-LTGTIP-SSIFSLSSL 226 (495)
Q Consensus 155 ~~L~l~~n~-l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~l----~~l~~L~~L~l~~n~-l~~~~~-~~l~~l~~L 226 (495)
.+|+++.+. +++. +...+.++..++.+.+.+|.-. -.+.+ +.+..+.++++..|. ++.... ..-..+..|
T Consensus 219 ~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~--~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~l 296 (483)
T KOG4341|consen 219 KYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLEL--ELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHAL 296 (483)
T ss_pred HHhhhccCchhhcCcchHHhccchhhhhhhhcccccc--cHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHh
Confidence 777777652 3221 1112334555666655554311 11222 233445555554442 222111 111235677
Q ss_pred ceeeCCCCcCCCC-CCccc-ccccccceeeccCcc-cccccchhhhhCCccccccccccceee--ecccccccCCCCCCe
Q 011044 227 LNLDLSLNNFTGI-IPSSI-GNLSSLQKLYLSDNQ-LSGELPANIGNNLPSLQTLSLYVNDFS--GAIPKEIGNLTKLTD 301 (495)
Q Consensus 227 ~~L~Ls~n~l~~~-~~~~l-~~~~~L~~L~l~~n~-l~~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~l~~l~~L~~ 301 (495)
+.+..+++...+. +...+ .++++|+.+.++.++ ++..-...++.+.+.|+.+++..+... +.+...-.+++.|+.
T Consensus 297 q~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~ 376 (483)
T KOG4341|consen 297 QVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRV 376 (483)
T ss_pred hhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhcc
Confidence 7887777653222 11222 466788888888874 554444566667888888888877542 223334466788888
Q ss_pred eecccccccccC-----CccccCCCcCCEEeCcCCccc-ccCCcCccCCCCCcEEEccCCcCceecCC-CCCCCCCChhh
Q 011044 302 LYLDQNKLQGKI-----PHEIGNLRKLEWLMLSHNKLV-GVVPAPIFNLSTLISLQLHNNSLSGSLPS-SADVPLPNLEE 374 (495)
Q Consensus 302 L~L~~n~i~~~~-----~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~~l~~L~~ 374 (495)
+.+++|...... ...-.....|+.+.+++++.. +.....+..+++|+.+++.+++--...+. .....+|+++.
T Consensus 377 lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q~vtk~~i~~~~~~lp~i~v 456 (483)
T KOG4341|consen 377 LSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQDVTKEAISRFATHLPNIKV 456 (483)
T ss_pred CChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechhhhhhhhhHHHHhhCcccee
Confidence 888887543221 112234567888889888643 44445566788899998888864322221 12334565554
No 60
>PHA02988 hypothetical protein; Provisional
Probab=98.16 E-value=2.2e-06 Score=81.50 Aligned_cols=84 Identities=19% Similarity=0.371 Sum_probs=58.2
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++|||||||++.|++||+.|.+. .+...+.+........ ..+ ...+...+.++...
T Consensus 197 ~~~~~k~Di~SlGvil~el~~g~~Pf~~-----~~~~~~~~~i~~~~~~----~~~----------~~~~~~~l~~li~~ 257 (283)
T PHA02988 197 SEYTIKDDIYSLGVVLWEIFTGKIPFEN-----LTTKEIYDLIINKNNS----LKL----------PLDCPLEIKCIVEA 257 (283)
T ss_pred ccccchhhhhHHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHhcCCC----CCC----------CCcCcHHHHHHHHH
Confidence 3567899999999999999999999653 2223333332221110 000 00233447788999
Q ss_pred cCCCCccCchhHHHHHHHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
|.+.+|.+||+|.|+++.|+..+
T Consensus 258 cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 258 CTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HhcCCcccCcCHHHHHHHHHHHH
Confidence 99999999999999999998765
No 61
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.15 E-value=8e-08 Score=90.74 Aligned_cols=279 Identities=23% Similarity=0.168 Sum_probs=152.4
Q ss_pred CCcEEEccCCcccccCC-hhHhhcCCCCCEEEccccc-CCccCCccc-CCCCCCCEEEcccC-cCccccCc-cccCCCCC
Q 011044 104 SLLSIYFNNNTLFGELP-PNFCNQMSNLESLFLKYNM-FHGKIPSTL-SSCKQLRELSLSSN-YFSGTIPK-EIGNLTKL 178 (495)
Q Consensus 104 ~L~~L~l~~n~~~~~~p-~~~~~~l~~L~~L~l~~n~-l~~~~~~~l-~~l~~L~~L~l~~n-~l~~~~~~-~l~~l~~L 178 (495)
.|+.|.+.++.-.+.-+ ..+...++++++|.+.+|. +++..-..+ ..+++|++|++..| .++..... -...+++|
T Consensus 139 ~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL 218 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKL 218 (483)
T ss_pred ccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhH
Confidence 46777777776544333 3445568888888887775 332222222 35678888888774 34433222 22357788
Q ss_pred CEEEccCCC-CCCCC-ChhhhCcccccEEEecCCcCCCc--CchhhhcCCCCceeeCCCCc-CCCCCC-cccccccccce
Q 011044 179 TRLNLRQNK-LQGEI-PEELGNLAELEMLWLQNNSLTGT--IPSSIFSLSSLLNLDLSLNN-FTGIIP-SSIGNLSSLQK 252 (495)
Q Consensus 179 ~~L~L~~n~-l~~~~-~~~l~~l~~L~~L~l~~n~l~~~--~~~~l~~l~~L~~L~Ls~n~-l~~~~~-~~l~~~~~L~~ 252 (495)
++|+++++. +++.. -.-..++..++.+.+.||.-.+. +-..-+.+..+.++++..|. +++..- ..-..+..|+.
T Consensus 219 ~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~ 298 (483)
T KOG4341|consen 219 KYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHALQV 298 (483)
T ss_pred HHhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHhhh
Confidence 888888774 33321 12234555666666666532211 11111234455666655553 222211 11134667788
Q ss_pred eeccCcc-cccccchhhhhCCccccccccccce-eeeccc-ccccCCCCCCeeeccccccccc--CCccccCCCcCCEEe
Q 011044 253 LYLSDNQ-LSGELPANIGNNLPSLQTLSLYVND-FSGAIP-KEIGNLTKLTDLYLDQNKLQGK--IPHEIGNLRKLEWLM 327 (495)
Q Consensus 253 L~l~~n~-l~~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~-~~l~~l~~L~~L~L~~n~i~~~--~~~~l~~l~~L~~L~ 327 (495)
|+.+++. +++..-..++++.++|+.|.++.++ ++..-- ..-.+.+.|+.+++..+..... +.+.-.+++.|+.+.
T Consensus 299 l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~ls 378 (483)
T KOG4341|consen 299 LCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLS 378 (483)
T ss_pred hcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccCC
Confidence 8877763 3333334566677888888888775 332111 1124557788888877753321 222234678888888
Q ss_pred CcCCcccccC-----CcCccCCCCCcEEEccCCcCceecCCCCCCCCCChhhhhhhhcCC
Q 011044 328 LSHNKLVGVV-----PAPIFNLSTLISLQLHNNSLSGSLPSSADVPLPNLEELFLWEYGR 382 (495)
Q Consensus 328 l~~n~l~~~~-----~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~~~~ 382 (495)
+++|...... ...-.....|..+.+++++.....-......+++|+.+++.++..
T Consensus 379 lshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q~ 438 (483)
T KOG4341|consen 379 LSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQD 438 (483)
T ss_pred hhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechhh
Confidence 8887543211 112235567788888888765332222333566777766666553
No 62
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=98.15 E-value=4.8e-07 Score=84.89 Aligned_cols=84 Identities=20% Similarity=0.464 Sum_probs=54.9
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|+......+.++||||||++++|++| |+.|.. +.+..++............ ...+...+
T Consensus 175 E~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~-----~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~ 234 (259)
T PF07714_consen 175 EVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFS-----DYDNEEIIEKLKQGQRLPI---------------PDNCPKDI 234 (259)
T ss_dssp HHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTT-----TSCHHHHHHHHHTTEETTS---------------BTTSBHHH
T ss_pred ccccccccccccccccccccccccccccccccc-----cccccccccccccccccee---------------ccchhHHH
Confidence 44334457889999999999999999 567743 2244455444432221110 11234457
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l 482 (495)
.++...|.+.+|.+||+|.++++.|
T Consensus 235 ~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 235 YSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHHhcC
Confidence 8999999999999999999999876
No 63
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.08 E-value=3e-06 Score=87.37 Aligned_cols=90 Identities=22% Similarity=0.427 Sum_probs=66.7
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|.-..++.++++|||||||+|-|+|| |+.|.... +=.+-++..-..+++. ..+.|...+
T Consensus 675 EsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~gl-----Sn~EVIe~i~~g~lL~---------------~Pe~CP~~v 734 (774)
T KOG1026|consen 675 ESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGL-----SNQEVIECIRAGQLLS---------------CPENCPTEV 734 (774)
T ss_pred HHhhcCcccchhhhhhhhhhhhhhhccccCccccc-----chHHHHHHHHcCCccc---------------CCCCCCHHH
Confidence 55567899999999999999999998 67886432 2112222222222221 244789999
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQKLETR 488 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~i~~~ 488 (495)
..+-+.|..+.|.+||++.|+-..|+.....
T Consensus 735 Y~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 735 YSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred HHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999876543
No 64
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=98.06 E-value=3.2e-06 Score=80.28 Aligned_cols=86 Identities=23% Similarity=0.421 Sum_probs=58.3
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|....+..+.++|||||||++.|++| |+.|...... ..+..+++. .....+ ...+...+
T Consensus 196 E~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~--~~~~~~i~~---~~~~~~---------------~~~~~~~~ 255 (283)
T cd05048 196 EAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN--QEVIEMIRS---RQLLPC---------------PEDCPARV 255 (283)
T ss_pred HHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHc---CCcCCC---------------cccCCHHH
Confidence 44444567788999999999999998 8888643221 122222221 111000 11234558
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQK 484 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~ 484 (495)
.++...|++.+|.+||++.||++.|+.
T Consensus 256 ~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 256 YALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 899999999999999999999999875
No 65
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.05 E-value=5.9e-07 Score=72.02 Aligned_cols=84 Identities=35% Similarity=0.446 Sum_probs=45.9
Q ss_pred CCCCCEEEcccCcCccccCcccc-CCCCCCEEEccCCCCCCCCChhhhCcccccEEEecCCcCCCcCchhhhcCCCCcee
Q 011044 151 CKQLRELSLSSNYFSGTIPKEIG-NLTKLTRLNLRQNKLQGEIPEELGNLAELEMLWLQNNSLTGTIPSSIFSLSSLLNL 229 (495)
Q Consensus 151 l~~L~~L~l~~n~l~~~~~~~l~-~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 229 (495)
...|...++++|.+. ..|..|. .++.++.|++++|.++ .+|..+..++.|+.|+++.|.+. ..|..+..+.+|..|
T Consensus 52 ~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~L 128 (177)
T KOG4579|consen 52 GYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDML 128 (177)
T ss_pred CceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHh
Confidence 344455555555555 2333333 3345566666666655 45555666666666666666655 445555556666666
Q ss_pred eCCCCcCC
Q 011044 230 DLSLNNFT 237 (495)
Q Consensus 230 ~Ls~n~l~ 237 (495)
+..+|.+.
T Consensus 129 ds~~na~~ 136 (177)
T KOG4579|consen 129 DSPENARA 136 (177)
T ss_pred cCCCCccc
Confidence 66655544
No 66
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=98.04 E-value=1.5e-06 Score=91.33 Aligned_cols=179 Identities=19% Similarity=0.209 Sum_probs=99.3
Q ss_pred CeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCc------------cc---cCCCCCcEEEccCCccc-ccC
Q 011044 56 RVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPS------------SI---FNMSSLLSIYFNNNTLF-GEL 119 (495)
Q Consensus 56 ~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~------------~l---~~l~~L~~L~l~~n~~~-~~~ 119 (495)
.++.+++.+..+.......+.... |++|.|.+-......-. .+ ..-.+|++|+++|.... ..-
T Consensus 61 ~ltki~l~~~~~~~~~~~~l~~~~-L~sl~LGnl~~~k~~~~~~~~idi~~lL~~~Ln~~sr~nL~~LdI~G~~~~s~~W 139 (699)
T KOG3665|consen 61 NLTKIDLKNVTLQHQTLEMLRKQD-LESLKLGNLDKIKQDYLDDATIDIISLLKDLLNEESRQNLQHLDISGSELFSNGW 139 (699)
T ss_pred eeEEeeccceecchhHHHHHhhcc-ccccCCcchHhhhhhhhhhhhccHHHHHHHHHhHHHHHhhhhcCccccchhhccH
Confidence 577777777666554444444444 77777755322211100 00 01256777777776432 334
Q ss_pred ChhHhhcCCCCCEEEcccccCCc-cCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCCC-CCChhhh
Q 011044 120 PPNFCNQMSNLESLFLKYNMFHG-KIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQG-EIPEELG 197 (495)
Q Consensus 120 p~~~~~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~l~ 197 (495)
|..++..+|+|++|.+.+-.+.. ..-....++|+|..||+++++++.. .+++++++|+.|.+.+-.+.. ..-..+-
T Consensus 140 ~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF 217 (699)
T KOG3665|consen 140 PKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLF 217 (699)
T ss_pred HHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHh
Confidence 45566667777777777755432 2223345677777777777777633 566777777777776655542 1223455
Q ss_pred CcccccEEEecCCcCCCcC--c----hhhhcCCCCceeeCCCCcCC
Q 011044 198 NLAELEMLWLQNNSLTGTI--P----SSIFSLSSLLNLDLSLNNFT 237 (495)
Q Consensus 198 ~l~~L~~L~l~~n~l~~~~--~----~~l~~l~~L~~L~Ls~n~l~ 237 (495)
++++|+.||+|........ . +.-..+|+|+.||.|++.+.
T Consensus 218 ~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~ 263 (699)
T KOG3665|consen 218 NLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDIN 263 (699)
T ss_pred cccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchh
Confidence 6777777777765433111 0 01123566666666655544
No 67
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=98.03 E-value=5.6e-06 Score=79.05 Aligned_cols=86 Identities=19% Similarity=0.373 Sum_probs=58.4
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.++||||||+++.|++| |+.|.... +....++.......... ...+...+.++
T Consensus 198 ~~~~~~~~~Di~slG~il~el~t~g~~p~~~~-----~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l 257 (291)
T cd05094 198 MYRKFTTESDVWSFGVILWEIFTYGKQPWFQL-----SNTEVIECITQGRVLER---------------PRVCPKEVYDI 257 (291)
T ss_pred ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHhCCCCCCC---------------CccCCHHHHHH
Confidence 34456778999999999999999 88885432 11222222111111100 01123447789
Q ss_pred HhhcCCCCccCchhHHHHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQKLET 487 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~i~~ 487 (495)
...|+..+|.+||+|.+|+++|+.+..
T Consensus 258 i~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 258 MLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999998864
No 68
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=98.03 E-value=3.2e-06 Score=80.19 Aligned_cols=86 Identities=19% Similarity=0.387 Sum_probs=59.3
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++||||||+++.|++| |+.|.+.. ....+..+++...... . ...+...+.++.
T Consensus 193 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--~~~~~~~~~~~~~~~~-----~-------------~~~~~~~~~~li 252 (280)
T cd05043 193 NKEYSSASDVWSFGVLLWELMTLGQTPYVEI--DPFEMAAYLKDGYRLA-----Q-------------PINCPDELFAVM 252 (280)
T ss_pred cCCCCchhhHHHhHHHHHHHhcCCCCCcCcC--CHHHHHHHHHcCCCCC-----C-------------CCcCCHHHHHHH
Confidence 3446778999999999999999 98886532 1123333333211100 0 011233477899
Q ss_pred hhcCCCCccCchhHHHHHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQKLETR 488 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~i~~~ 488 (495)
..|...+|.+||++.+|++.|+.+.++
T Consensus 253 ~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 253 ACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred HHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999987653
No 69
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=98.01 E-value=2e-06 Score=81.71 Aligned_cols=99 Identities=14% Similarity=0.281 Sum_probs=57.3
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccc--cccccchhhHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWK--DKHFMTKEQCMSFVFN 459 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~--~~~~~~~~~~~~~~~~ 459 (495)
..+..+.++|+|+||++++|+++|..|..... ..|.+..-...........+.... .........+...+.+
T Consensus 184 ~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (284)
T cd05081 184 TESKFSVASDVWSFGVVLYELFTYSDKSCSPP------AEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYA 257 (284)
T ss_pred ccCCcChHHHHHHHHHHHHHHhhcCCcCCCcc------hhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHH
Confidence 34456778999999999999999876642210 111111111110000000000000 0000011123456889
Q ss_pred HHhhcCCCCccCchhHHHHHHHHHHHH
Q 011044 460 LAMECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 460 ~~~~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
+...|++.+|.+||++.|++++|+.++
T Consensus 258 li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 258 IMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred HHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 999999999999999999999998764
No 70
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=97.98 E-value=4.6e-06 Score=79.11 Aligned_cols=89 Identities=13% Similarity=0.279 Sum_probs=58.9
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|....+..+.++||||||+++.|++| |+.|+..... ..+.+++... . ....+ ..|...+
T Consensus 181 E~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~~---~--~~~~~-------------~~~~~~~ 240 (279)
T cd05111 181 ESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--HEVPDLLEKG---E--RLAQP-------------QICTIDV 240 (279)
T ss_pred HHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCC---C--cCCCC-------------CCCCHHH
Confidence 33334556789999999999999998 8888643221 1122232211 0 00011 1133446
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQKLET 487 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~i~~ 487 (495)
..+...|...+|.+||++.|+++.+..+..
T Consensus 241 ~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 241 YMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 778889999999999999999999987653
No 71
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=97.98 E-value=4.3e-06 Score=78.22 Aligned_cols=88 Identities=18% Similarity=0.337 Sum_probs=60.4
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|....+..+.++|+||||+++.|++| |+.|++... +..+..++....+ ... ...+...+
T Consensus 168 E~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~--~~~~~~~~~~~~~---~~~---------------~~~~~~~l 227 (257)
T cd05060 168 ECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK--GAEVIAMLESGER---LPR---------------PEECPQEI 227 (257)
T ss_pred HHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHHcCCc---CCC---------------CCCCCHHH
Confidence 44445567789999999999999998 888865421 2233333322111 000 11223457
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
.++...|...+|.+||++.++++.|+.+.
T Consensus 228 ~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 228 YSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 78999999999999999999999998763
No 72
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=97.98 E-value=7.5e-06 Score=76.86 Aligned_cols=87 Identities=20% Similarity=0.249 Sum_probs=58.0
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|.......+.++||||||+++.|++| |+.|... .+..++.+....... ... .+.+...+
T Consensus 175 E~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~-----~~~~~~~~~~~~~~~-----~~~----------~~~~~~~~ 234 (263)
T cd05052 175 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-----IDLSQVYELLEKGYR-----MER----------PEGCPPKV 234 (263)
T ss_pred HHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHCCCC-----CCC----------CCCCCHHH
Confidence 33344556778999999999999998 8877432 233333333221110 000 01123447
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
.++...|...+|.+||+|.+++++|+.+
T Consensus 235 ~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 235 YELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 7889999999999999999999998864
No 73
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=97.98 E-value=8.4e-06 Score=76.56 Aligned_cols=87 Identities=15% Similarity=0.252 Sum_probs=59.5
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+||||+++.|+++|+.|... +..++.++.+.........+ ..+.....+.++..
T Consensus 180 ~~~~~~~~Di~slG~il~~l~~g~~p~~~---~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~i~ 242 (267)
T cd08224 180 ENGYNFKSDIWSLGCLLYEMAALQSPFYG---DKMNLYSLCKKIEKCDYPPL--------------PADHYSEELRDLVS 242 (267)
T ss_pred cCCCCchhcHHHHHHHHHHHHHCCCCccc---CCccHHHHHhhhhcCCCCCC--------------ChhhcCHHHHHHHH
Confidence 44567789999999999999999998532 23454444433222111000 01112334778889
Q ss_pred hcCCCCccCchhHHHHHHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
.|+..+|.+||++.+++++++.+.
T Consensus 243 ~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 243 RCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHcCCCcccCCCHHHHHHHHHHhc
Confidence 999999999999999999998764
No 74
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=97.97 E-value=4.3e-06 Score=78.72 Aligned_cols=83 Identities=17% Similarity=0.347 Sum_probs=57.1
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++||||||+++.|++| |+.|.... +-.++.+........ + ...++...+.+++
T Consensus 184 ~~~~~~~~Dv~slG~il~ell~~g~~p~~~~-----~~~~~~~~i~~~~~~----~-----------~~~~~~~~~~~li 243 (268)
T cd05063 184 YRKFTSASDVWSFGIVMWEVMSFGERPYWDM-----SNHEVMKAINDGFRL----P-----------APMDCPSAVYQLM 243 (268)
T ss_pred cCCcChHhHHHHHHHHHHHHHhCCCCCCCcC-----CHHHHHHHHhcCCCC----C-----------CCCCCCHHHHHHH
Confidence 3456778999999999999998 99996432 112333322111000 0 0112344578999
Q ss_pred hhcCCCCccCchhHHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
..|.+.+|.+||+|.+|++.|+++
T Consensus 244 ~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 244 LQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999875
No 75
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=97.97 E-value=6.9e-06 Score=80.29 Aligned_cols=85 Identities=16% Similarity=0.303 Sum_probs=56.1
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++||||||+++.|++| |+.|....-. -..+.+....... ... ...+...+.++.
T Consensus 250 ~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~----~~~~~~~~~~~~~-----~~~----------~~~~~~~l~~li 310 (338)
T cd05102 250 DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI----NEEFCQRLKDGTR-----MRA----------PENATPEIYRIM 310 (338)
T ss_pred cCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc----cHHHHHHHhcCCC-----CCC----------CCCCCHHHHHHH
Confidence 4456788999999999999997 8888543111 1112221111110 000 001223477899
Q ss_pred hhcCCCCccCchhHHHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
..|...+|.+||+|.|++++|+.+.
T Consensus 311 ~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 311 LACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999999998764
No 76
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=97.96 E-value=7.6e-06 Score=76.70 Aligned_cols=89 Identities=18% Similarity=0.291 Sum_probs=58.0
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVF 458 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~ 458 (495)
|+......+.++||||||+++.|+++|..|... ..+....++......... ..+.+...+.
T Consensus 172 E~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~----~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 232 (262)
T cd05058 172 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP----DVDSFDITVYLLQGRRLL---------------QPEYCPDPLY 232 (262)
T ss_pred hHhccCccchHHHHHHHHHHHHHHHcCCCCCCC----CCCHHHHHHHHhcCCCCC---------------CCCcCCHHHH
Confidence 333345567899999999999999997655321 122223333222211000 0011233577
Q ss_pred HHHhhcCCCCccCchhHHHHHHHHHHHH
Q 011044 459 NLAMECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 459 ~~~~~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
++...|...+|.+||++.|++++++.+.
T Consensus 233 ~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 233 EVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 8999999999999999999999998764
No 77
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=97.96 E-value=9.4e-06 Score=76.32 Aligned_cols=87 Identities=16% Similarity=0.209 Sum_probs=58.6
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+||||+++.|++||+.|... +..+...+........ .+... .......+.++..
T Consensus 180 ~~~~~~~~Di~slG~~l~el~~g~~p~~~---~~~~~~~~~~~~~~~~-----~~~~~---------~~~~~~~~~~li~ 242 (267)
T cd08228 180 ENGYNFKSDIWSLGCLLYEMAALQSPFYG---DKMNLFSLCQKIEQCD-----YPPLP---------TEHYSEKLRELVS 242 (267)
T ss_pred cCCCCchhhHHHHHHHHHHHhcCCCCCcc---ccccHHHHHHHHhcCC-----CCCCC---------hhhcCHHHHHHHH
Confidence 34456789999999999999999999532 2334444443322111 11110 0112234677888
Q ss_pred hcCCCCccCchhHHHHHHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
.|...+|.+||++.+|++.++.++
T Consensus 243 ~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 243 MCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHCCCCcccCcCHHHHHHHHHHhc
Confidence 999999999999999999998764
No 78
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=97.95 E-value=4.5e-06 Score=79.66 Aligned_cols=86 Identities=23% Similarity=0.389 Sum_probs=57.3
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.++||||||+++.|++| |+.|... ....+++.......... . ...+...+.++
T Consensus 202 ~~~~~~~~~Di~slG~~l~el~t~g~~p~~~-----~~~~~~~~~~~~~~~~~-----~----------~~~~~~~~~~~ 261 (290)
T cd05045 202 FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG-----IAPERLFNLLKTGYRME-----R----------PENCSEEMYNL 261 (290)
T ss_pred ccCCcchHhHHHHHHHHHHHHHhcCCCCCCC-----CCHHHHHHHHhCCCCCC-----C----------CCCCCHHHHHH
Confidence 34456788999999999999999 8888542 12222222111110000 0 01123347789
Q ss_pred HhhcCCCCccCchhHHHHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQKLET 487 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~i~~ 487 (495)
...|.+.+|.+||+|.++++.|+.+-.
T Consensus 262 i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 262 MLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 999999999999999999999988643
No 79
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.94 E-value=2.9e-06 Score=89.17 Aligned_cols=151 Identities=24% Similarity=0.222 Sum_probs=106.1
Q ss_pred CCCCEEeCcCCcC-CccCCcccc-CCCCCcEEEccCCcccccCChhHhhcCCCCCEEEcccccCCccCCcccCCCCCCCE
Q 011044 79 SSLQALDLSFNWF-YGSIPSSIF-NMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLFLKYNMFHGKIPSTLSSCKQLRE 156 (495)
Q Consensus 79 ~~L~~L~L~~n~l-~~~~~~~l~-~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 156 (495)
.+|++|++++... ....|..++ .+|.|+.|.+.+-.+...--..++.++|+|..||+++++++.. ..++++++|++
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 6799999988643 223333444 4899999999997775444456777899999999999998743 67889999999
Q ss_pred EEcccCcCcc-ccCccccCCCCCCEEEccCCCCCCCC--C----hhhhCcccccEEEecCCcCCCcCchhh-hcCCCCce
Q 011044 157 LSLSSNYFSG-TIPKEIGNLTKLTRLNLRQNKLQGEI--P----EELGNLAELEMLWLQNNSLTGTIPSSI-FSLSSLLN 228 (495)
Q Consensus 157 L~l~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~--~----~~l~~l~~L~~L~l~~n~l~~~~~~~l-~~l~~L~~ 228 (495)
|.+.+=.+.. ..-..+..+++|+.||+|........ . +.-..+|+|+.||.+++.+...+.+.+ ..-++|+.
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~ 279 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQQ 279 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHhh
Confidence 9988755542 22245678999999999987654221 1 112458999999999988775544333 23455555
Q ss_pred eeC
Q 011044 229 LDL 231 (495)
Q Consensus 229 L~L 231 (495)
+.+
T Consensus 280 i~~ 282 (699)
T KOG3665|consen 280 IAA 282 (699)
T ss_pred hhh
Confidence 543
No 80
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=97.93 E-value=7.5e-06 Score=79.99 Aligned_cols=89 Identities=17% Similarity=0.242 Sum_probs=58.0
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|.......+.++|||||||++.|++| |+.|+...... ...............+ ......+
T Consensus 245 E~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~--------------~~~~~~~ 305 (337)
T cd05054 245 ESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID-----EEFCRRLKEGTRMRAP--------------EYATPEI 305 (337)
T ss_pred HHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc-----HHHHHHHhccCCCCCC--------------ccCCHHH
Confidence 33344567889999999999999998 88886432111 1111111111100000 0122347
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
.+++..|.+.+|.+||++.|+++.|+.+-
T Consensus 306 ~~l~~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 306 YSIMLDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 88999999999999999999999998753
No 81
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=97.93 E-value=9.2e-06 Score=76.61 Aligned_cols=84 Identities=20% Similarity=0.350 Sum_probs=56.8
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.++||||||+++.|++| |+.|+.. .+..+..+........+. ...+...+.++
T Consensus 184 ~~~~~~~~~Di~slG~il~el~~~g~~pf~~-----~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l 243 (270)
T cd05047 184 NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-----MTCAELYEKLPQGYRLEK---------------PLNCDDEVYDL 243 (270)
T ss_pred ccCCCCchhhHHHHHHHHHHHHcCCCCCccc-----cCHHHHHHHHhCCCCCCC---------------CCcCCHHHHHH
Confidence 34456778999999999999997 8888542 222233332211110000 00122347799
Q ss_pred HhhcCCCCccCchhHHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
...|...+|.+||++.+++++|+.+
T Consensus 244 i~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 244 MRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred HHHHcccChhhCCCHHHHHHHHHHh
Confidence 9999999999999999999999865
No 82
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.92 E-value=8.8e-06 Score=77.28 Aligned_cols=82 Identities=21% Similarity=0.455 Sum_probs=56.4
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
..+..+.++||||||+++.|++| |..|... ....++++.........+ ...+...+..+
T Consensus 199 ~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~-----~~~~~~~~~i~~~~~~~~---------------~~~~~~~~~~l 258 (283)
T cd05091 199 MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG-----YSNQDVIEMIRNRQVLPC---------------PDDCPAWVYTL 258 (283)
T ss_pred hcCCCCcchhHHHHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHcCCcCCC---------------CCCCCHHHHHH
Confidence 34556778999999999999998 6666432 222344443332221110 11234457889
Q ss_pred HhhcCCCCccCchhHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
...|++.+|.+||+|.++++.|+
T Consensus 259 i~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 259 MLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHhCCCcccCCCHHHHHHHhh
Confidence 99999999999999999998876
No 83
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=97.89 E-value=8.5e-06 Score=76.77 Aligned_cols=87 Identities=11% Similarity=0.286 Sum_probs=58.2
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|....+..+.++||||||+++.|+++ |+.|+.... ......++....+.. ...++...+
T Consensus 181 E~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~--~~~~~~~i~~~~~~~------------------~~~~~~~~~ 240 (269)
T cd05065 181 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS--NQDVINAIEQDYRLP------------------PPMDCPTAL 240 (269)
T ss_pred hHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC--HHHHHHHHHcCCcCC------------------CcccCCHHH
Confidence 33334556778999999999999886 888864321 112333332111100 011334557
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
.++...|.+.+|.+||+|.+++..|+.+
T Consensus 241 ~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 241 HQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 7899999999999999999999988764
No 84
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.89 E-value=8e-06 Score=78.54 Aligned_cols=89 Identities=13% Similarity=0.222 Sum_probs=55.8
Q ss_pred CCccccCCCcceeehhhhhhcccCC--CCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAK--KPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFN 459 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk--~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~ 459 (495)
..+..+.++||||||+++.|++++. .|....- ......++...+......+... ....+...+.+
T Consensus 213 ~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 279 (304)
T cd05096 213 LMGKFTTASDVWAFGVTLWEILMLCKEQPYGELT--DEQVIENAGEFFRDQGRQVYLF-----------RPPPCPQGLYE 279 (304)
T ss_pred hcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCC--HHHHHHHHHHHhhhcccccccc-----------CCCCCCHHHHH
Confidence 3456778999999999999998754 4433211 1223333333332211111000 01123455889
Q ss_pred HHhhcCCCCccCchhHHHHHHHHH
Q 011044 460 LAMECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 460 ~~~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
+...|.+.+|.+||+|.+|++.|+
T Consensus 280 li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 280 LMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHHHHccCCchhCcCHHHHHHHHh
Confidence 999999999999999999988875
No 85
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=97.88 E-value=1.5e-05 Score=76.29 Aligned_cols=87 Identities=18% Similarity=0.298 Sum_probs=58.5
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.++|||||||++.||+| |+.|... .+..++.+......... . ...+...+.++
T Consensus 191 ~~~~~~~~~DvwSlG~il~el~t~g~~pf~~-----~~~~~~~~~~~~~~~~~-----~----------~~~~~~~~~~l 250 (297)
T cd05089 191 NYSVYTTKSDVWSFGVLLWEIVSLGGTPYCG-----MTCAELYEKLPQGYRME-----K----------PRNCDDEVYEL 250 (297)
T ss_pred ccCCCCchhhHHHHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHhcCCCCC-----C----------CCCCCHHHHHH
Confidence 34456778999999999999998 8888542 22233333222111000 0 01122347789
Q ss_pred HhhcCCCCccCchhHHHHHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQKLETR 488 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~i~~~ 488 (495)
...|...+|.+||++.+++++|+.+...
T Consensus 251 i~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 251 MRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred HHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999887643
No 86
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=97.88 E-value=1.7e-05 Score=74.67 Aligned_cols=83 Identities=18% Similarity=0.332 Sum_probs=55.6
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++||||||+++.|+++ |..|... ..-.++.+......... . ...+...+.++.
T Consensus 189 ~~~~~~~~Dv~SlG~il~el~~~g~~p~~~-----~~~~~~~~~~~~~~~~~-----~----------~~~~~~~~~~li 248 (273)
T cd05035 189 DRVYTSKSDVWAFGVTMWEIATRGQTPYPG-----VENHEIYDYLRHGNRLK-----Q----------PEDCLDELYDLM 248 (273)
T ss_pred cCCCCcccchHHHHHHHHHHHhCCCCCCCC-----CCHHHHHHHHHcCCCCC-----C----------CcCCCHHHHHHH
Confidence 4456778999999999999999 7777532 11122222222111100 0 012334578888
Q ss_pred hhcCCCCccCchhHHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
..|...+|.+||++.|+++.|+.+
T Consensus 249 ~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 249 YSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHHcCCChhhCcCHHHHHHHHHhh
Confidence 999999999999999999998764
No 87
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=97.88 E-value=1.4e-05 Score=76.17 Aligned_cols=88 Identities=18% Similarity=0.322 Sum_probs=59.3
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.++|+||||+++.||+| |+.|..... -...++......... . ...+...+.++
T Consensus 195 ~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~-----~~~~~~~i~~~~~~~-----~----------~~~~~~~l~~l 254 (288)
T cd05093 195 MYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS-----NNEVIECITQGRVLQ-----R----------PRTCPKEVYDL 254 (288)
T ss_pred ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCcCC-----C----------CCCCCHHHHHH
Confidence 34456778999999999999998 888754321 112222111111100 0 00122348899
Q ss_pred HhhcCCCCccCchhHHHHHHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQKLETRC 489 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~i~~~~ 489 (495)
...|.+.+|.+||++.+|++.|+.+....
T Consensus 255 i~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 255 MLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred HHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999887653
No 88
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=97.87 E-value=1e-05 Score=76.06 Aligned_cols=83 Identities=18% Similarity=0.394 Sum_probs=55.5
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++||||||+++.|+++ |..|+..... ..+.+++....... . ...+...+.++.
T Consensus 182 ~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~~-------~-----------~~~~~~~l~~li 241 (266)
T cd05033 182 YRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN--QDVIKAVEDGYRLP-------P-----------PMDCPSALYQLM 241 (266)
T ss_pred cCCCccccchHHHHHHHHHHHccCCCCCCCCCH--HHHHHHHHcCCCCC-------C-----------CCCCCHHHHHHH
Confidence 3456778999999999999998 8888643211 11222221111000 0 012234477999
Q ss_pred hhcCCCCccCchhHHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
..|.+.+|.+||+|.++++.|+++
T Consensus 242 ~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 242 LDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999864
No 89
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=97.86 E-value=8.6e-06 Score=76.33 Aligned_cols=83 Identities=18% Similarity=0.291 Sum_probs=55.1
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
..+..+.++|+||||+++.|++| |+.|....- ......++....+. +. ...+...+.++
T Consensus 177 ~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~~~~~~-------~~-----------~~~~~~~~~~l 236 (261)
T cd05072 177 NFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS--NSDVMSALQRGYRM-------PR-----------MENCPDELYDI 236 (261)
T ss_pred ccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC--HHHHHHHHHcCCCC-------CC-----------CCCCCHHHHHH
Confidence 34556778999999999999999 888853211 11222222211110 00 01123347789
Q ss_pred HhhcCCCCccCchhHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQK 484 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~ 484 (495)
...|...+|.+||++.++.+.|+.
T Consensus 237 i~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 237 MKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHHccCCcccCcCHHHHHHHHhc
Confidence 999999999999999999998874
No 90
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.86 E-value=1.7e-05 Score=76.33 Aligned_cols=85 Identities=19% Similarity=0.395 Sum_probs=59.0
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++||||||+++.|++| |..|.. +.+..++++.......... ...+...+.++.
T Consensus 213 ~~~~~~~~Di~slG~~l~el~~~g~~p~~-----~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~li 272 (304)
T cd05101 213 DRVYTHQSDVWSFGVLMWEIFTLGGSPYP-----GIPVEELFKLLKEGHRMDK---------------PANCTNELYMMM 272 (304)
T ss_pred cCCCCchhhHHHHHHHHHHHHcCCCCCcc-----cCCHHHHHHHHHcCCcCCC---------------CCCCCHHHHHHH
Confidence 4456778999999999999998 666643 2344455443322111100 012344577889
Q ss_pred hhcCCCCccCchhHHHHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQKLET 487 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~i~~ 487 (495)
..|...+|.+||+|.|+++.|+++..
T Consensus 273 ~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 273 RDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred HHHcccChhhCCCHHHHHHHHHHHHH
Confidence 99999999999999999999988754
No 91
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=97.86 E-value=2.1e-05 Score=74.72 Aligned_cols=89 Identities=20% Similarity=0.359 Sum_probs=57.3
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCcccc----------CCCCCHHHHHHHHhCCCcceeeeccccccccccccchh
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIF----------NGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKE 451 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~----------~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~ 451 (495)
.....+.++|+||||+++.|++|++.|..... .+......+++......... ...
T Consensus 185 ~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~ 249 (284)
T cd05079 185 IQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLP---------------RPP 249 (284)
T ss_pred ccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCC---------------CCC
Confidence 34456778999999999999999876532110 11222222222211111000 011
Q ss_pred hHHHHHHHHHhhcCCCCccCchhHHHHHHHHHHH
Q 011044 452 QCMSFVFNLAMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 452 ~~~~~~~~~~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
.+...+.++...|.+.+|.+||++.++++.++.|
T Consensus 250 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 250 NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 2345688999999999999999999999998875
No 92
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=97.86 E-value=1.1e-05 Score=75.86 Aligned_cols=85 Identities=8% Similarity=0.127 Sum_probs=54.9
Q ss_pred cCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHH
Q 011044 380 YGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFN 459 (495)
Q Consensus 380 ~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~ 459 (495)
....+..+.++||||||+++.|+++|+.|... .+....+..........+.+ ......+.+
T Consensus 184 ~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~-----~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~~ 244 (269)
T cd08528 184 IVKNEPYGEKADVWAFGCILYQMCTLQPPFYS-----TNMLSLATKIVEAVYEPLPE--------------GMYSEDVTD 244 (269)
T ss_pred hhcCCCCchHHHHHHHHHHHHHHHhCCCcccc-----cCHHHHHHHHhhccCCcCCc--------------ccCCHHHHH
Confidence 33345567889999999999999999988532 12223332222111110000 011233667
Q ss_pred HHhhcCCCCccCchhHHHHHHHHH
Q 011044 460 LAMECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 460 ~~~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
+...|.+.+|.+||+|.||+++++
T Consensus 245 li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 245 VITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHHCCCCCccCCCHHHHHHHhc
Confidence 788999999999999999998875
No 93
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=97.85 E-value=9.7e-06 Score=77.58 Aligned_cols=92 Identities=21% Similarity=0.271 Sum_probs=54.6
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCC--CCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAK--KPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSF 456 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk--~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~ 456 (495)
|....+..+.++||||||+++.|++|+. .|.+... .....+.+..........+... ....+...
T Consensus 201 E~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 267 (295)
T cd05097 201 ESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS--DEQVIENTGEFFRNQGRQIYLS-----------QTPLCPSP 267 (295)
T ss_pred hhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC--hHHHHHHHHHhhhhccccccCC-----------CCCCCCHH
Confidence 3334456788999999999999999854 3432211 1111111111111110000000 00112345
Q ss_pred HHHHHhhcCCCCccCchhHHHHHHHHH
Q 011044 457 VFNLAMECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 457 ~~~~~~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
+.+++..|.+.+|.+||+|.+|++.|+
T Consensus 268 l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 268 VFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 889999999999999999999998886
No 94
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=97.84 E-value=2.7e-05 Score=74.36 Aligned_cols=84 Identities=21% Similarity=0.437 Sum_probs=55.8
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.++|||||||++.|+++ |..|... .+..+..+......... ....+...+.++
T Consensus 207 ~~~~~~~~~Di~slG~il~el~~~g~~p~~~-----~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~l 266 (293)
T cd05053 207 FDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG-----IPVEELFKLLKEGYRME---------------KPQNCTQELYHL 266 (293)
T ss_pred ccCCcCcccceeehhhHHHHHhcCCCCCCCC-----CCHHHHHHHHHcCCcCC---------------CCCCCCHHHHHH
Confidence 34456788999999999999997 7777432 22222221111110000 011223458889
Q ss_pred HhhcCCCCccCchhHHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
...|...+|.+||++.|+++.|+.+
T Consensus 267 i~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 267 MRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred HHHHcccCcccCcCHHHHHHHHHHh
Confidence 9999999999999999999999876
No 95
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=97.84 E-value=2.1e-05 Score=73.97 Aligned_cols=86 Identities=14% Similarity=0.213 Sum_probs=55.9
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+||||+++.|+++|+.|... +..+...+.+.... ...+... .......+..+..
T Consensus 180 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~---~~~~~~~~~~~~~~-----~~~~~~~---------~~~~~~~~~~li~ 242 (267)
T cd08229 180 ENGYNFKSDIWSLGCLLYEMAALQSPFYG---DKMNLYSLCKKIEQ-----CDYPPLP---------SDHYSEELRQLVN 242 (267)
T ss_pred CCCccchhhHHHHHHHHHHHHhCCCCccc---ccchHHHHhhhhhc-----CCCCCCC---------cccccHHHHHHHH
Confidence 34456789999999999999999999532 22232333222111 1111110 0012234667888
Q ss_pred hcCCCCccCchhHHHHHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
.|...+|.+||+|.+|+++++++
T Consensus 243 ~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 243 MCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred HhcCCCcccCCCHHHHHHHHhhh
Confidence 99999999999999999988764
No 96
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=97.83 E-value=1.4e-05 Score=79.21 Aligned_cols=88 Identities=16% Similarity=0.289 Sum_probs=56.6
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|....+..+.++|||||||++.|+++ |+.|......+. .+.+. ..... ....+.. ....+
T Consensus 284 E~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~----~~~~~-~~~~~-~~~~~~~-------------~~~~l 344 (374)
T cd05106 284 ESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS----KFYKM-VKRGY-QMSRPDF-------------APPEI 344 (374)
T ss_pred HHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH----HHHHH-HHccc-CccCCCC-------------CCHHH
Confidence 33334557789999999999999997 998865322111 11111 11110 0000100 12336
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
.++...|.+.+|.+||++.+|+++|+++
T Consensus 345 ~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 345 YSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 7888899999999999999999999875
No 97
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=97.83 E-value=9.2e-06 Score=78.09 Aligned_cols=86 Identities=16% Similarity=0.285 Sum_probs=58.2
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.++||||||+++.|++| |+.|..... ...+.++++.... .. ....+...+..+
T Consensus 184 ~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~~~----------~~--------~~~~~~~~~~~l 243 (303)
T cd05110 184 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIPDLLEKGER----------LP--------QPPICTIDVYMV 243 (303)
T ss_pred ccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHCCCC----------CC--------CCCCCCHHHHHH
Confidence 34556778999999999999997 888864321 1122333321100 00 001233457888
Q ss_pred HhhcCCCCccCchhHHHHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQKLET 487 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~i~~ 487 (495)
...|...+|.+||+|.++++.++++..
T Consensus 244 i~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 244 MVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred HHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999988753
No 98
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=97.83 E-value=1.4e-05 Score=74.65 Aligned_cols=84 Identities=20% Similarity=0.423 Sum_probs=56.8
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.++|||+||+++.|+++ |+.|.. ..+..+++.........++ ...+...+.++
T Consensus 172 ~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~-----~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l 231 (256)
T cd05082 172 REKKFSTKSDVWSFGILLWEIYSFGRVPYP-----RIPLKDVVPRVEKGYKMDA---------------PDGCPPVVYDV 231 (256)
T ss_pred ccCCCCchhhhHHHHHHHHHHHhCCCCCCC-----CCCHHHHHHHHhcCCCCCC---------------CCCCCHHHHHH
Confidence 34456778999999999999998 877743 2233343332221111110 01223457788
Q ss_pred HhhcCCCCccCchhHHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
...|...+|.+||++.++++.|+.+
T Consensus 232 i~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 232 MKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHHHhcCChhhCcCHHHHHHHHhcC
Confidence 9999999999999999999988753
No 99
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=97.81 E-value=1.5e-05 Score=79.05 Aligned_cols=84 Identities=13% Similarity=0.314 Sum_probs=55.3
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.++||||||+++.|++| |+.|...... ...+.++++...... .+. .....+.++
T Consensus 289 ~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~-~~~~~~~~~~~~~~~-----~~~-------------~~~~~l~~l 349 (375)
T cd05104 289 FNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV-DSKFYKMIKEGYRML-----SPE-------------CAPSEMYDI 349 (375)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc-hHHHHHHHHhCccCC-----CCC-------------CCCHHHHHH
Confidence 34556778999999999999998 7777543211 112233332211100 000 012346788
Q ss_pred HhhcCCCCccCchhHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQK 484 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~ 484 (495)
...|...+|.+||+|.||+++|+.
T Consensus 350 i~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 350 MKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HHHHccCChhHCcCHHHHHHHHHh
Confidence 999999999999999999999885
No 100
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=97.80 E-value=2.1e-05 Score=73.43 Aligned_cols=80 Identities=23% Similarity=0.338 Sum_probs=53.4
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++|+||||+++.|+++ |+.|... .+..+.++....... ...+.. ....+.++.
T Consensus 175 ~~~~~~~~Di~s~G~~l~el~~~g~~p~~~-----~~~~~~~~~i~~~~~--~~~~~~-------------~~~~~~~li 234 (256)
T cd05114 175 FSKYSSKSDVWSFGVLMWEVFTEGKMPFEK-----KSNYEVVEMISRGFR--LYRPKL-------------ASMTVYEVM 234 (256)
T ss_pred cCccchhhhhHHHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHCCCC--CCCCCC-------------CCHHHHHHH
Confidence 3456778999999999999999 8888532 122233332222110 001111 123478999
Q ss_pred hhcCCCCccCchhHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l 482 (495)
..|.+.+|.+||+|.++++.|
T Consensus 235 ~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 235 YSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHccCCcccCcCHHHHHHhh
Confidence 999999999999999998876
No 101
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=97.80 E-value=1.7e-05 Score=75.97 Aligned_cols=86 Identities=14% Similarity=0.303 Sum_probs=54.6
Q ss_pred CCccccCCCcceeehhhhhhccc--CCCCCccccCCCCCHHHHHHHH---hCCCcceeeeccccccccccccchhhHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT--AKKPTDEIFNGEMTLRRWVNDL---LSISVMEVVDANLLSWKDKHFMTKEQCMSF 456 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t--gk~p~~~~~~~~~~l~~wv~~~---~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~ 456 (495)
..+..+.++||||||+++.|++| |..|... .+..+++... +.........+ ....+...
T Consensus 205 ~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 268 (296)
T cd05095 205 LLGKFTTASDVWAFGVTLWEILTLCKEQPYSQ-----LSDEQVIENTGEFFRDQGRQVYLP-----------KPALCPDS 268 (296)
T ss_pred hcCCccchhhhhHHHHHHHHHHHhCCCCCccc-----cChHHHHHHHHHHHhhccccccCC-----------CCCCCCHH
Confidence 34567789999999999999998 4455321 1222333221 11110000000 01123456
Q ss_pred HHHHHhhcCCCCccCchhHHHHHHHHH
Q 011044 457 VFNLAMECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 457 ~~~~~~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
+.++...|...+|.+||+|.+|++.|+
T Consensus 269 ~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 269 LYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 889999999999999999999998875
No 102
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.79 E-value=2.5e-05 Score=75.21 Aligned_cols=86 Identities=17% Similarity=0.385 Sum_probs=58.8
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++|||||||++.|+++ |+.|.. +.+....++........+ ....+...+.++.
T Consensus 216 ~~~~~~~~DvwslG~~l~el~~~g~~p~~-----~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~li 275 (307)
T cd05098 216 DRIYTHQSDVWSFGVLLWEIFTLGGSPYP-----GVPVEELFKLLKEGHRMD---------------KPSNCTNELYMMM 275 (307)
T ss_pred cCCCCcHHHHHHHHHHHHHHHcCCCCCCC-----cCCHHHHHHHHHcCCCCC---------------CCCcCCHHHHHHH
Confidence 3445678999999999999998 777743 234334433322111100 0112234577889
Q ss_pred hhcCCCCccCchhHHHHHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQKLETR 488 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~i~~~ 488 (495)
..|...+|.+||+|.+|++.|+++...
T Consensus 276 ~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 276 RDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999988654
No 103
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=97.79 E-value=1.8e-05 Score=74.16 Aligned_cols=86 Identities=21% Similarity=0.319 Sum_probs=55.9
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|.......+.++||||||+++.|++| |+.|.... .-..-........... . ...+...+
T Consensus 174 E~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~-----~~~~~~~~~~~~~~~~-----~----------~~~~~~~~ 233 (261)
T cd05068 174 EAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGM-----TNAEVLQQVDQGYRMP-----C----------PPGCPKEL 233 (261)
T ss_pred cccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHHHcCCCCC-----C----------CCcCCHHH
Confidence 33344556789999999999999999 88775431 1111111111110000 0 01123457
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQK 484 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~ 484 (495)
.+++..|...+|.+||+|.++++.|++
T Consensus 234 ~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 234 YDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 889999999999999999999999875
No 104
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=97.74 E-value=1.8e-05 Score=76.57 Aligned_cols=85 Identities=18% Similarity=0.291 Sum_probs=57.3
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++||||||+++.|++| |+.|.+. .+..++......... . . ....+...+.++.
T Consensus 185 ~~~~~~~~Di~slGv~l~el~t~g~~p~~~-----~~~~~~~~~~~~~~~-------~-~-------~~~~~~~~~~~li 244 (316)
T cd05108 185 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG-----IPASEISSILEKGER-------L-P-------QPPICTIDVYMIM 244 (316)
T ss_pred cCCCCchhhhHHHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHhCCCC-------C-C-------CCCCCCHHHHHHH
Confidence 4456788999999999999998 8888643 222222211111100 0 0 0112344578899
Q ss_pred hhcCCCCccCchhHHHHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQKLET 487 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~i~~ 487 (495)
..|...+|.+||++.+++..+..+..
T Consensus 245 ~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 245 VKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHc
Confidence 99999999999999999999887653
No 105
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=97.74 E-value=2.8e-05 Score=72.58 Aligned_cols=86 Identities=21% Similarity=0.342 Sum_probs=56.1
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|+......+.++|+||||+++.||+| |+.|++.. +-.+.++....... .. . ........+
T Consensus 170 E~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~-----~~~~~~~~~~~~~~------~~-~-------~~~~~~~~~ 230 (257)
T cd05040 170 ESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL-----SGSQILKKIDKEGE------RL-E-------RPEACPQDI 230 (257)
T ss_pred HHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHhcCC------cC-C-------CCccCCHHH
Confidence 33334456778999999999999999 99996532 22222222211100 00 0 001123457
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
.++...|...+|.+||++.++++.|.
T Consensus 231 ~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 231 YNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 88999999999999999999998774
No 106
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=97.74 E-value=2.7e-05 Score=72.39 Aligned_cols=86 Identities=21% Similarity=0.298 Sum_probs=56.1
Q ss_pred hhcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHH
Q 011044 378 WEYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSF 456 (495)
Q Consensus 378 ~~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~ 456 (495)
+|+...+..+.++|+||||+++.|+++ |..|.... ....-........... . ...+...
T Consensus 163 PE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~-----~~~~~~~~~~~~~~~~-----~----------~~~~~~~ 222 (250)
T cd05085 163 PEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGM-----TNQQAREQVEKGYRMS-----C----------PQKCPDD 222 (250)
T ss_pred HHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHHHHcCCCCC-----C----------CCCCCHH
Confidence 344445667889999999999999998 88785322 2111111111110000 0 0112345
Q ss_pred HHHHHhhcCCCCccCchhHHHHHHHHH
Q 011044 457 VFNLAMECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 457 ~~~~~~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
+.++...|...+|.+||+|.|++++|.
T Consensus 223 ~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 223 VYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 788999999999999999999998874
No 107
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=97.73 E-value=2.2e-05 Score=75.01 Aligned_cols=92 Identities=17% Similarity=0.288 Sum_probs=55.3
Q ss_pred hcCCCccccCCCcceeehhhhhhccc--CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT--AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSF 456 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t--gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~ 456 (495)
|+...+..+.++||||||+++.|+++ +..|..... ...+.+++...+.........+ ....+...
T Consensus 202 E~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 268 (296)
T cd05051 202 ESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT--DQQVIENAGHFFRDDGRQIYLP-----------RPPNCPKD 268 (296)
T ss_pred HHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--hHHHHHHHHhccccccccccCC-----------CccCCCHH
Confidence 33344567889999999999999998 445543211 1112222222111110000000 00112345
Q ss_pred HHHHHhhcCCCCccCchhHHHHHHHHH
Q 011044 457 VFNLAMECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 457 ~~~~~~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
+.++...|.+.+|.+||++.++++.|+
T Consensus 269 l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 269 IYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 889999999999999999999988875
No 108
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=97.73 E-value=3.4e-05 Score=72.75 Aligned_cols=86 Identities=16% Similarity=0.262 Sum_probs=56.1
Q ss_pred cCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHH
Q 011044 380 YGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVF 458 (495)
Q Consensus 380 ~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~ 458 (495)
+......+.++|+||||+++.|+++ |+.|... ..-.+..+......... . ...+...+.
T Consensus 185 ~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~-----~~~~~~~~~~~~~~~~~-----~----------~~~~~~~~~ 244 (272)
T cd05075 185 SLADRVYTTKSDVWSFGVTMWEIATRGQTPYPG-----VENSEIYDYLRQGNRLK-----Q----------PPDCLDGLY 244 (272)
T ss_pred HccCCCcChHHHHHHHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHcCCCCC-----C----------CCCCCHHHH
Confidence 3334456778999999999999999 6777532 11122222211111100 0 012233477
Q ss_pred HHHhhcCCCCccCchhHHHHHHHHHHH
Q 011044 459 NLAMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 459 ~~~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
++...|.+.+|.+||++.++++.|+.+
T Consensus 245 ~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 245 SLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 899999999999999999999998864
No 109
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=97.72 E-value=2.8e-05 Score=77.25 Aligned_cols=91 Identities=15% Similarity=0.277 Sum_probs=64.1
Q ss_pred hhcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHH-HHHhCCCcceeeeccccccccccccchhhHHH
Q 011044 378 WEYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWV-NDLLSISVMEVVDANLLSWKDKHFMTKEQCMS 455 (495)
Q Consensus 378 ~~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv-~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~ 455 (495)
+|.-.++..+.++|||+|||++-|+++ |..|...+- ...+..|| +..++.... .....
T Consensus 331 PEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~--~~~v~~kI~~~~~r~~~~------------------~~~p~ 390 (474)
T KOG0194|consen 331 PETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK--NYEVKAKIVKNGYRMPIP------------------SKTPK 390 (474)
T ss_pred hhhhccCccccccchhheeeeEEeeeccCCCCCCCCC--HHHHHHHHHhcCccCCCC------------------CCCHH
Confidence 466667788999999999999999998 677865322 12344555 222222111 12244
Q ss_pred HHHHHHhhcCCCCccCchhHHHHHHHHHHHHHH
Q 011044 456 FVFNLAMECTVESPIRESTQRKLLQDSQKLETR 488 (495)
Q Consensus 456 ~~~~~~~~C~~~~p~~Rp~m~~v~~~l~~i~~~ 488 (495)
.+..+.-.|...+|.+||+|.+|++.++.+...
T Consensus 391 ~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 391 ELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred HHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 466777799999999999999999999987654
No 110
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=97.72 E-value=2.5e-05 Score=74.42 Aligned_cols=85 Identities=19% Similarity=0.284 Sum_probs=57.2
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|.......+.++|||||||++.|+++ |..|.. +.+...+++.......... .+.+...+
T Consensus 202 E~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~-----~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l 261 (288)
T cd05050 202 ESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY-----GMAHEEVIYYVRDGNVLSC---------------PDNCPLEL 261 (288)
T ss_pred HHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCC-----CCCHHHHHHHHhcCCCCCC---------------CCCCCHHH
Confidence 33344566788999999999999997 766743 2233344433322221100 01123457
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
.++...|.+.+|.+||++.|+++.|+
T Consensus 262 ~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 262 YNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred HHHHHHHcccCcccCCCHHHHHHHhh
Confidence 88999999999999999999999886
No 111
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.72 E-value=4.3e-05 Score=72.78 Aligned_cols=86 Identities=14% Similarity=0.254 Sum_probs=53.9
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccC---CCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFN---GEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFN 459 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~---~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~ 459 (495)
....+.++|||++|+++.|++||+.|.+..-. ....+..|+.........+..+. .......+.+
T Consensus 177 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ 244 (287)
T cd06621 177 GKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGN------------GIKWSEEFKD 244 (287)
T ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCC------------CCchHHHHHH
Confidence 44567789999999999999999999764311 11233333332111111000000 0011234778
Q ss_pred HHhhcCCCCccCchhHHHHHH
Q 011044 460 LAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 460 ~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
+...|...+|.+||+|.|+++
T Consensus 245 li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 245 FIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred HHHHHcCCCcccCCCHHHHHh
Confidence 999999999999999999965
No 112
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=97.71 E-value=3.1e-05 Score=72.81 Aligned_cols=84 Identities=13% Similarity=0.287 Sum_probs=55.7
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
..+..+.++||||||+++.|+++ |+.|.... +-...++......... ....+...+.++
T Consensus 181 ~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~-----~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~l 240 (266)
T cd05064 181 QYHHFSSASDVWSFGIVMWEVMSYGERPYWDM-----SGQDVIKAVEDGFRLP---------------APRNCPNLLHQL 240 (266)
T ss_pred hhCCccchhHHHHHHHHHHHHhcCCCCCcCcC-----CHHHHHHHHHCCCCCC---------------CCCCCCHHHHHH
Confidence 34567789999999999999775 98886432 2222222211110000 011234557788
Q ss_pred HhhcCCCCccCchhHHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
...|.+.+|.+||+|.++.+.|+.+
T Consensus 241 i~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 241 MLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHcCCCchhCCCHHHHHHHHHhh
Confidence 9999999999999999999888653
No 113
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=97.71 E-value=3e-05 Score=72.45 Aligned_cols=82 Identities=17% Similarity=0.251 Sum_probs=55.0
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.+..+.++|+||||+++.|++| |+.|..... -..+.+..-......+ ...+...+.++.
T Consensus 172 ~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----~~~~~~~i~~~~~~~~---------------~~~~~~~l~~li 231 (257)
T cd05116 172 YYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK-----GNEVTQMIESGERMEC---------------PQRCPPEMYDLM 231 (257)
T ss_pred cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHCCCCCCC---------------CCCCCHHHHHHH
Confidence 3456678999999999999998 888865321 1223222211111100 011233467899
Q ss_pred hhcCCCCccCchhHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQK 484 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~ 484 (495)
..|...+|.+||+|.+|+++|+.
T Consensus 232 ~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 232 KLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHhccCchhCcCHHHHHHHHhc
Confidence 99999999999999999998863
No 114
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.70 E-value=5e-05 Score=73.37 Aligned_cols=89 Identities=21% Similarity=0.345 Sum_probs=59.2
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|....+..+.++|+||||+++.|+++ |+.|.. +.+....++........+. ...+...+
T Consensus 206 E~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~-----~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l 265 (314)
T cd05099 206 EALFDRVYTHQSDVWSFGILMWEIFTLGGSPYP-----GIPVEELFKLLREGHRMDK---------------PSNCTHEL 265 (314)
T ss_pred HHHccCCcCccchhhHHHHHHHHHHhCCCCCCC-----CCCHHHHHHHHHcCCCCCC---------------CCCCCHHH
Confidence 33334556788999999999999999 777743 2233333322211111110 01223457
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQKLET 487 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~i~~ 487 (495)
.++...|...+|.+||++.++++.|+.+..
T Consensus 266 ~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 266 YMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 788999999999999999999999988764
No 115
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.70 E-value=9.2e-05 Score=63.75 Aligned_cols=84 Identities=25% Similarity=0.364 Sum_probs=46.6
Q ss_pred CCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEEcccccCCcc-CCcccCCCCCCCEE
Q 011044 79 SSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLFLKYNMFHGK-IPSTLSSCKQLREL 157 (495)
Q Consensus 79 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~l~~n~l~~~-~~~~l~~l~~L~~L 157 (495)
.+...+||+.|.+.. ...|..++.|.+|.+.+|.|+ .+.+.+...+++|..|.+.+|.+... --..+..||+|++|
T Consensus 42 d~~d~iDLtdNdl~~--l~~lp~l~rL~tLll~nNrIt-~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~L 118 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLRK--LDNLPHLPRLHTLLLNNNRIT-RIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYL 118 (233)
T ss_pred cccceecccccchhh--cccCCCccccceEEecCCcce-eeccchhhhccccceEEecCcchhhhhhcchhccCCcccee
Confidence 455666777766541 224556666666777666664 33344444466677777776665421 11234455666666
Q ss_pred EcccCcCc
Q 011044 158 SLSSNYFS 165 (495)
Q Consensus 158 ~l~~n~l~ 165 (495)
.+-+|.++
T Consensus 119 tll~Npv~ 126 (233)
T KOG1644|consen 119 TLLGNPVE 126 (233)
T ss_pred eecCCchh
Confidence 66555544
No 116
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=97.70 E-value=4.4e-05 Score=74.48 Aligned_cols=85 Identities=20% Similarity=0.398 Sum_probs=59.1
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++||||||+++.|+++ |..|.. +.+..++.+........+. ...+...+.++.
T Consensus 210 ~~~~~~~~Di~slG~il~el~~~g~~p~~-----~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~li 269 (334)
T cd05100 210 DRVYTHQSDVWSFGVLLWEIFTLGGSPYP-----GIPVEELFKLLKEGHRMDK---------------PANCTHELYMIM 269 (334)
T ss_pred cCCcCchhhhHHHHHHHHHHHhcCCCCCC-----CCCHHHHHHHHHcCCCCCC---------------CCCCCHHHHHHH
Confidence 3445678999999999999998 677743 2344455443322211110 011233477899
Q ss_pred hhcCCCCccCchhHHHHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQKLET 487 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~i~~ 487 (495)
..|...+|.+||+|.|+++.|+.+..
T Consensus 270 ~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 270 RECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred HHHcccChhhCcCHHHHHHHHHHHhh
Confidence 99999999999999999999998874
No 117
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=97.69 E-value=2.4e-05 Score=74.12 Aligned_cols=87 Identities=16% Similarity=0.311 Sum_probs=59.0
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.++||||||+++.|++| |+.|.+... ...+..++........ ...+...+.++
T Consensus 184 ~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~~~~~~------------------~~~~~~~~~~l 243 (279)
T cd05109 184 LHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP--AREIPDLLEKGERLPQ------------------PPICTIDVYMI 243 (279)
T ss_pred ccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHHCCCcCCC------------------CccCCHHHHHH
Confidence 34456788999999999999998 888865322 1223344432111000 00123347788
Q ss_pred HhhcCCCCccCchhHHHHHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQKLETR 488 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~i~~~ 488 (495)
...|...+|..||++.++++.++.++..
T Consensus 244 i~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 244 MVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred HHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 9999999999999999999988877543
No 118
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=97.69 E-value=2.3e-05 Score=73.39 Aligned_cols=83 Identities=19% Similarity=0.426 Sum_probs=55.1
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
..+..+.++|+|+||+++.|+++ |+.|..... .....+++....... . ...+...+.++
T Consensus 177 ~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~--~~~~~~~~~~~~~~~--------~----------~~~~~~~~~~~ 236 (261)
T cd05148 177 SHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN--NHEVYDQITAGYRMP--------C----------PAKCPQEIYKI 236 (261)
T ss_pred ccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC--HHHHHHHHHhCCcCC--------C----------CCCCCHHHHHH
Confidence 34456778999999999999998 788853211 111222222111100 0 01233457789
Q ss_pred HhhcCCCCccCchhHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQK 484 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~ 484 (495)
...|...+|.+||++.++++.|+.
T Consensus 237 i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 237 MLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred HHHHcCCCchhCcCHHHHHHHHhc
Confidence 999999999999999999999875
No 119
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.69 E-value=0.00013 Score=70.97 Aligned_cols=32 Identities=25% Similarity=0.336 Sum_probs=14.7
Q ss_pred ccccEEEecCCcCCCcCchhhhcCCCCceeeCCCC
Q 011044 200 AELEMLWLQNNSLTGTIPSSIFSLSSLLNLDLSLN 234 (495)
Q Consensus 200 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n 234 (495)
++|++|++++|... ..|..+. .+|+.|.++.+
T Consensus 156 sSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ls~n 187 (426)
T PRK15386 156 PSLKTLSLTGCSNI-ILPEKLP--ESLQSITLHIE 187 (426)
T ss_pred CcccEEEecCCCcc-cCccccc--ccCcEEEeccc
Confidence 34555666555533 2222221 35555555544
No 120
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=97.69 E-value=2.5e-05 Score=72.85 Aligned_cols=82 Identities=16% Similarity=0.228 Sum_probs=53.2
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVF 458 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~ 458 (495)
|+...+..+.++|+||||+++.|++||+.|....- -...++.........+. ......+.
T Consensus 171 E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~---------------~~~~~~~~ 230 (256)
T cd08529 171 ELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN-----QGALILKIIRGVFPPVS---------------QMYSQQLA 230 (256)
T ss_pred HHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCCCCCCc---------------cccCHHHH
Confidence 44444556788999999999999999999964321 11111211111110000 01223478
Q ss_pred HHHhhcCCCCccCchhHHHHHH
Q 011044 459 NLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 459 ~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
++...|.+.+|.+||+|.++++
T Consensus 231 ~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 231 QLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred HHHHHHccCCcccCcCHHHHhh
Confidence 8899999999999999999875
No 121
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.68 E-value=4e-05 Score=49.59 Aligned_cols=34 Identities=32% Similarity=0.536 Sum_probs=12.5
Q ss_pred CCEEeCcCCcCCccCCccccCCCCCcEEEccCCcc
Q 011044 81 LQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTL 115 (495)
Q Consensus 81 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 115 (495)
|++|++++|+|+ .+|..+.++++|++|++++|.+
T Consensus 3 L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i 36 (44)
T PF12799_consen 3 LEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPI 36 (44)
T ss_dssp -SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCC
T ss_pred ceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCC
Confidence 444444444443 2222333444444444444433
No 122
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=97.68 E-value=3.8e-05 Score=72.01 Aligned_cols=88 Identities=15% Similarity=0.201 Sum_probs=55.7
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVF 458 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~ 458 (495)
|.......+.++|+|+||+++.|+++|+.|..............++......... +. .......+.
T Consensus 169 E~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---------~~~~~~~~~ 234 (265)
T cd06605 169 ERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPR-----LP---------SGKFSPDFQ 234 (265)
T ss_pred HHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCC-----CC---------hhhcCHHHH
Confidence 3333445678899999999999999999997543322223334444333221110 00 000122366
Q ss_pred HHHhhcCCCCccCchhHHHHHH
Q 011044 459 NLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 459 ~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
++...|...+|.+||++.+++.
T Consensus 235 ~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 235 DFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred HHHHHHcCCCchhCcCHHHHhh
Confidence 7788999999999999999864
No 123
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.67 E-value=6.4e-05 Score=64.70 Aligned_cols=103 Identities=24% Similarity=0.278 Sum_probs=77.5
Q ss_pred CeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCccc--ccCChhHhhcCCCCCEE
Q 011044 56 RVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLF--GELPPNFCNQMSNLESL 133 (495)
Q Consensus 56 ~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~--~~~p~~~~~~l~~L~~L 133 (495)
....+||++|.+... ..|..++.|.+|.|.+|.|+..-|.--.-+++|..|.+.+|.+. +.+-+ + ..||.|++|
T Consensus 43 ~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~p-L-a~~p~L~~L 118 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDP-L-ASCPKLEYL 118 (233)
T ss_pred ccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcch-h-ccCCcccee
Confidence 567889999998644 46888999999999999999777765556788999999999874 22222 2 238999999
Q ss_pred EcccccCCccCC---cccCCCCCCCEEEcccC
Q 011044 134 FLKYNMFHGKIP---STLSSCKQLRELSLSSN 162 (495)
Q Consensus 134 ~l~~n~l~~~~~---~~l~~l~~L~~L~l~~n 162 (495)
.+-+|.+...-- -.+..+|+|++||++.-
T Consensus 119 tll~Npv~~k~~YR~yvl~klp~l~~LDF~kV 150 (233)
T KOG1644|consen 119 TLLGNPVEHKKNYRLYVLYKLPSLRTLDFQKV 150 (233)
T ss_pred eecCCchhcccCceeEEEEecCcceEeehhhh
Confidence 999998774211 13467788888887653
No 124
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=97.67 E-value=3.6e-05 Score=72.87 Aligned_cols=81 Identities=19% Similarity=0.400 Sum_probs=54.5
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.+..+.++||||||+++.|+++ |+.|.... +-.+.++.......... .......+.++.
T Consensus 198 ~~~~~~~~Di~slG~il~e~~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~li 257 (280)
T cd05049 198 YRKFTTESDVWSFGVVLWEIFTYGKQPWYGL-----SNEEVIECITQGRLLQR---------------PRTCPSEVYDIM 257 (280)
T ss_pred cCCcchhhhHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHHHcCCcCCC---------------CCCCCHHHHHHH
Confidence 4456778999999999999999 98885421 22222322221111100 001234478899
Q ss_pred hhcCCCCccCchhHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
..|.+.+|.+||++.||++.|+
T Consensus 258 ~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 258 LGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHcCCCcccCCCHHHHHHHhh
Confidence 9999999999999999998875
No 125
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=97.66 E-value=4.2e-05 Score=72.40 Aligned_cols=86 Identities=17% Similarity=0.301 Sum_probs=56.8
Q ss_pred hhcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHH
Q 011044 378 WEYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSF 456 (495)
Q Consensus 378 ~~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~ 456 (495)
+|....+..+.++|||||||++.|++| |+.|.+. .+..+.++......... . ...+...
T Consensus 190 PE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~-----~~~~~~~~~~~~~~~~~-----~----------~~~~~~~ 249 (277)
T cd05036 190 PEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPG-----RTNQEVMEFVTGGGRLD-----P----------PKGCPGP 249 (277)
T ss_pred HHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHcCCcCC-----C----------CCCCCHH
Confidence 344455667889999999999999997 8877542 12223332222111000 0 0112345
Q ss_pred HHHHHhhcCCCCccCchhHHHHHHHHH
Q 011044 457 VFNLAMECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 457 ~~~~~~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
+.++...|.+.+|.+||++.+|++.|.
T Consensus 250 ~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 250 VYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 778999999999999999999988775
No 126
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=97.66 E-value=5.9e-05 Score=72.47 Aligned_cols=83 Identities=20% Similarity=0.351 Sum_probs=55.0
Q ss_pred ccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 384 GRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
...+.++||||||+++.|++| |..|+.. .+..+..+........+ . .......+.++..
T Consensus 198 ~~~~~~~Di~slG~il~ellt~g~~p~~~-----~~~~~~~~~~~~~~~~~-----~----------~~~~~~~~~~li~ 257 (303)
T cd05088 198 SVYTTNSDVWSYGVLLWEIVSLGGTPYCG-----MTCAELYEKLPQGYRLE-----K----------PLNCDDEVYDLMR 257 (303)
T ss_pred cCCcccccchhhhhHHHHHHhcCCCCccc-----CChHHHHHHHhcCCcCC-----C----------CCCCCHHHHHHHH
Confidence 345678999999999999998 8888532 12223222211110000 0 0011234778899
Q ss_pred hcCCCCccCchhHHHHHHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
.|.+.+|.+||++.+++++++.+-
T Consensus 258 ~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 258 QCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred HHcCCChhhCcCHHHHHHHHHHHH
Confidence 999999999999999999988764
No 127
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=97.66 E-value=2.7e-05 Score=73.39 Aligned_cols=83 Identities=16% Similarity=0.354 Sum_probs=54.8
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++||||||+++.|+++ |+.|..... ...+..++.. ..... . ...+...+.+++
T Consensus 189 ~~~~~~~sDi~slG~il~el~~~g~~p~~~~~--~~~~~~~~~~---~~~~~-----~----------~~~~~~~~~~l~ 248 (273)
T cd05074 189 DNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE--NSEIYNYLIK---GNRLK-----Q----------PPDCLEDVYELM 248 (273)
T ss_pred cCccchhhhhHHHHHHHHHHhhCCCCCCCCCC--HHHHHHHHHc---CCcCC-----C----------CCCCCHHHHHHH
Confidence 3445678999999999999999 777743211 1122222221 11000 0 011234588899
Q ss_pred hhcCCCCccCchhHHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
..|.+.+|.+||++.++.+.|+.+
T Consensus 249 ~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 249 CQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHcCCChhhCcCHHHHHHHHHhh
Confidence 999999999999999999999875
No 128
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=97.65 E-value=4.8e-05 Score=71.15 Aligned_cols=83 Identities=14% Similarity=0.281 Sum_probs=56.1
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++||||||+++.|+++ |+.|.... .-..+........... . ...+...+.++.
T Consensus 172 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-----~~~~~~~~~~~~~~~~-~--------------~~~~~~~l~~li 231 (257)
T cd05115 172 FRKFSSRSDVWSYGITMWEAFSYGQKPYKKM-----KGPEVMSFIEQGKRLD-C--------------PAECPPEMYALM 231 (257)
T ss_pred cCCCCchhhHHHHHHHHHHHhcCCCCCcCcC-----CHHHHHHHHHCCCCCC-C--------------CCCCCHHHHHHH
Confidence 4456778999999999999996 88886532 2222222211111000 0 112334577899
Q ss_pred hhcCCCCccCchhHHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
..|...+|.+||+|.+|.+.|+.+
T Consensus 232 ~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 232 KDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHcCCChhhCcCHHHHHHHHhhh
Confidence 999999999999999999888754
No 129
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=97.65 E-value=4.1e-05 Score=71.43 Aligned_cols=84 Identities=21% Similarity=0.339 Sum_probs=55.8
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|....+..+.++|||+||+++.|+++ |+.|.+.. .....++...... ...++.. ....+
T Consensus 171 e~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~-----~~~~~~~~~~~~~--~~~~~~~-------------~~~~~ 230 (256)
T cd05112 171 EVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENR-----SNSEVVETINAGF--RLYKPRL-------------ASQSV 230 (256)
T ss_pred hHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcC-----CHHHHHHHHhCCC--CCCCCCC-------------CCHHH
Confidence 33344567778999999999999998 88886432 2223333222111 0011111 12348
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l 482 (495)
.+++..|.+.+|.+||+|.+|+++|
T Consensus 231 ~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 231 YELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHHHHHHcccChhhCCCHHHHHHhh
Confidence 8899999999999999999998876
No 130
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=97.65 E-value=4.9e-05 Score=70.92 Aligned_cols=82 Identities=17% Similarity=0.205 Sum_probs=54.4
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVF 458 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~ 458 (495)
|.......+.++|+||||+++.|++||+.|... ......+..........+ .......+.
T Consensus 171 e~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~-----~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 230 (256)
T cd08218 171 EICENRPYNNKSDIWALGCVLYEMCTLKHAFEA-----GNMKNLVLKIIRGSYPPV---------------SSHYSYDLR 230 (256)
T ss_pred HHhCCCCCCCccchhHHHHHHHHHHcCCCCccC-----CCHHHHHHHHhcCCCCCC---------------cccCCHHHH
Confidence 333445667889999999999999999998542 123334433332221110 001123467
Q ss_pred HHHhhcCCCCccCchhHHHHHH
Q 011044 459 NLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 459 ~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
++...|...+|.+||+|.+|++
T Consensus 231 ~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 231 NLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred HHHHHHhhCChhhCcCHHHHhh
Confidence 7888999999999999999975
No 131
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=97.64 E-value=3.2e-05 Score=73.16 Aligned_cols=79 Identities=16% Similarity=0.277 Sum_probs=51.5
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.....+.++||||||+++.|++||+.|....... ....++ .... .+.+ ...+...+.++.
T Consensus 174 ~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~~----~~~~----~~~~----------~~~~~~~~~~li 233 (277)
T cd06642 174 KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM--RVLFLI----PKNS----PPTL----------EGQYSKPFKEFV 233 (277)
T ss_pred CcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh--hHHhhh----hcCC----CCCC----------CcccCHHHHHHH
Confidence 3445677899999999999999999996432211 111111 1100 0111 112234477888
Q ss_pred hhcCCCCccCchhHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~ 480 (495)
..|...+|.+||+|.+|++
T Consensus 234 ~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 234 EACLNKDPRFRPTAKELLK 252 (277)
T ss_pred HHHccCCcccCcCHHHHHH
Confidence 9999999999999999976
No 132
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.64 E-value=6e-05 Score=48.78 Aligned_cols=34 Identities=38% Similarity=0.475 Sum_probs=12.5
Q ss_pred CCEEEcccccCCccCCcccCCCCCCCEEEcccCcC
Q 011044 130 LESLFLKYNMFHGKIPSTLSSCKQLRELSLSSNYF 164 (495)
Q Consensus 130 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 164 (495)
|++|++++|+++ .+|..++++++|++|++++|.+
T Consensus 3 L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i 36 (44)
T PF12799_consen 3 LEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPI 36 (44)
T ss_dssp -SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCC
T ss_pred ceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCC
Confidence 344444444433 2232334444444444444433
No 133
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=97.64 E-value=5.6e-05 Score=71.09 Aligned_cols=85 Identities=21% Similarity=0.422 Sum_probs=55.5
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|....+..+.++||||||+++.|++| |+.|..... ......++. ... .+. ........+
T Consensus 183 E~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~--~~~~~~~~~---~~~-------~~~--------~~~~~~~~~ 242 (269)
T cd05044 183 ESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN--NQEVLQHVT---AGG-------RLQ--------KPENCPDKI 242 (269)
T ss_pred HHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC--HHHHHHHHh---cCC-------ccC--------CcccchHHH
Confidence 33345567889999999999999998 888854211 111212211 110 000 001123457
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
.++...|...+|.+||+|.++.+.|+
T Consensus 243 ~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 243 YQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred HHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 78999999999999999999998875
No 134
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=97.64 E-value=3.3e-05 Score=72.62 Aligned_cols=87 Identities=14% Similarity=0.296 Sum_probs=57.1
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|.......+.++|+|+||+++.|+++ |+.|+...- ......++..... . +. ...+...+
T Consensus 179 e~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~--~~~~~~~~~~~~~--~-----~~-----------~~~~~~~~ 238 (267)
T cd05066 179 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS--NQDVIKAIEEGYR--L-----PA-----------PMDCPAAL 238 (267)
T ss_pred hHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC--HHHHHHHHhCCCc--C-----CC-----------CCCCCHHH
Confidence 33334556788999999999999886 888864321 1122222221110 0 00 00123446
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
.++...|...+|.+||+|.++++.|+.+
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 239 HQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 7889999999999999999999998864
No 135
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=97.63 E-value=3.8e-05 Score=76.76 Aligned_cols=86 Identities=14% Similarity=0.285 Sum_probs=56.5
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.++|||||||++.|+++ |..|......+ ..+........ ... ....+...+.++
T Consensus 312 ~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~-----~~~~~~~~~~~------~~~--------~~~~~~~~l~~l 372 (400)
T cd05105 312 FDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD-----STFYNKIKSGY------RMA--------KPDHATQEVYDI 372 (400)
T ss_pred cCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh-----HHHHHHHhcCC------CCC--------CCccCCHHHHHH
Confidence 34456778999999999999997 88886543211 11111111110 000 011223457889
Q ss_pred HhhcCCCCccCchhHHHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
...|...+|.+||++.+|+++|+.+.
T Consensus 373 i~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 373 MVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 99999999999999999999998653
No 136
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=97.62 E-value=5.1e-05 Score=81.44 Aligned_cols=90 Identities=19% Similarity=0.382 Sum_probs=62.9
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|.-..+..++|+|||||||++-|+|| |..|.-..-..+ -+..|++ ++ ++. ....|...+
T Consensus 874 Esl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~-v~~~~~~----gg-------RL~--------~P~~CP~~l 933 (1025)
T KOG1095|consen 874 ESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE-VLLDVLE----GG-------RLD--------PPSYCPEKL 933 (1025)
T ss_pred HHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH-HHHHHHh----CC-------ccC--------CCCCCChHH
Confidence 55556888999999999999999998 455643211100 1111221 11 121 133688889
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQKLETR 488 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~i~~~ 488 (495)
.+|...|...+|++||++..+++.+..|...
T Consensus 934 y~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 934 YQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred HHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 9999999999999999999999988877543
No 137
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=97.61 E-value=4.2e-05 Score=72.36 Aligned_cols=81 Identities=19% Similarity=0.412 Sum_probs=54.4
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.+..+.++|||||||++.|++| |+.|... .+.....+.......... ...+...+.++.
T Consensus 195 ~~~~~~~~Di~slG~~l~el~~~~~~p~~~-----~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~li 254 (277)
T cd05062 195 DGVFTTYSDVWSFGVVLWEIATLAEQPYQG-----MSNEQVLRFVMEGGLLDK---------------PDNCPDMLFELM 254 (277)
T ss_pred cCCcCchhHHHHHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHcCCcCCC---------------CCCCCHHHHHHH
Confidence 4456778999999999999999 5667432 222333332222111100 012234578899
Q ss_pred hhcCCCCccCchhHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
..|...+|.+||++.|+++.++
T Consensus 255 ~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 255 RMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHcCCChhhCcCHHHHHHHhh
Confidence 9999999999999999998875
No 138
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.61 E-value=0.00023 Score=69.34 Aligned_cols=56 Identities=13% Similarity=0.244 Sum_probs=28.7
Q ss_pred cCCCCCcEEEccCCcccccCChhHhhcCCCCCEEEcccccCCccCCcccCCCCCCCEEEcccC
Q 011044 100 FNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLFLKYNMFHGKIPSTLSSCKQLRELSLSSN 162 (495)
Q Consensus 100 ~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 162 (495)
..++++++|++++|.+ ..+|. + ..+|++|.+++|.--..+|..+. ++|++|++++|
T Consensus 49 ~~~~~l~~L~Is~c~L-~sLP~-L---P~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~C 104 (426)
T PRK15386 49 EEARASGRLYIKDCDI-ESLPV-L---PNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHC 104 (426)
T ss_pred HHhcCCCEEEeCCCCC-cccCC-C---CCCCcEEEccCCCCcccCCchhh--hhhhheEccCc
Confidence 3456666777776654 34441 1 33566666665432223443331 35556666555
No 139
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=97.59 E-value=3.8e-05 Score=71.75 Aligned_cols=81 Identities=21% Similarity=0.351 Sum_probs=52.8
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.++|+||||+++.|++| |+.|.+..- .......++.... ... ...+...+.++
T Consensus 174 ~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~~~~~~~~--------~~~----------~~~~~~~~~~l 233 (256)
T cd05059 174 DYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFS--NSEVVESVSAGYR--------LYR----------PKLAPTEVYTI 233 (256)
T ss_pred ccCCCCchhhHHHHHHHHHHHhccCCCCCCCCC--HHHHHHHHHcCCc--------CCC----------CCCCCHHHHHH
Confidence 34556778999999999999999 677754211 1111111111000 000 01234458899
Q ss_pred HhhcCCCCccCchhHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l 482 (495)
...|...+|.+||+|.|+++.|
T Consensus 234 i~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 234 MYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHHhcCChhhCcCHHHHHHHh
Confidence 9999999999999999998876
No 140
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=97.59 E-value=4.4e-05 Score=73.35 Aligned_cols=85 Identities=14% Similarity=0.333 Sum_probs=54.6
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
..+..+.++|||||||++.|++| |+.|....... ..+.+++....+.. .+ ......+.++
T Consensus 216 ~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~-----~~-------------~~~~~~~~~l 276 (302)
T cd05055 216 FNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD-SKFYKLIKEGYRMA-----QP-------------EHAPAEIYDI 276 (302)
T ss_pred ccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch-HHHHHHHHcCCcCC-----CC-------------CCCCHHHHHH
Confidence 34556778999999999999998 88885432111 11112211110000 00 0011247788
Q ss_pred HhhcCCCCccCchhHHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
...|...+|.+||++.|+++.|+.+
T Consensus 277 i~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 277 MKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHHcCCCchhCcCHHHHHHHHHhh
Confidence 9999999999999999999988763
No 141
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=97.58 E-value=2.3e-05 Score=73.87 Aligned_cols=83 Identities=20% Similarity=0.331 Sum_probs=58.0
Q ss_pred ccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 384 GRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
...+..+|||+|||++-|+.| |+.|.-+.-.. ....++++.++ +. ....|.-+++.|..
T Consensus 473 ~~yssasDvWsfGVllWELmtlg~~PyaeIDPf--Em~~ylkdGyR----------la--------QP~NCPDeLf~vMa 532 (563)
T KOG1024|consen 473 SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF--EMEHYLKDGYR----------LA--------QPFNCPDELFTVMA 532 (563)
T ss_pred hhhcchhhhHHHHHHHHHHHhcCCCCccccCHH--HHHHHHhccce----------ec--------CCCCCcHHHHHHHH
Confidence 345677999999999999997 78886432111 11223322221 11 12257777999999
Q ss_pred hcCCCCccCchhHHHHHHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
.|.+..|++||+++|++.-|.+--
T Consensus 533 cCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 533 CCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred HHHhcCcccCCCHHHHHHHHHHHH
Confidence 999999999999999998887643
No 142
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=97.56 E-value=8.4e-05 Score=70.57 Aligned_cols=83 Identities=20% Similarity=0.425 Sum_probs=53.8
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
..+..+.++||||||+++.|++| |+.|.... +-....+......... . .+.+...+.++
T Consensus 199 ~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~-----~~~~~~~~~~~~~~~~-----~----------~~~~~~~~~~l 258 (283)
T cd05090 199 MYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGF-----SNQEVIEMVRKRQLLP-----C----------SEDCPPRMYSL 258 (283)
T ss_pred ccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHHcCCcCC-----C----------CCCCCHHHHHH
Confidence 34556788999999999999998 77774321 1112222211111110 0 11223446778
Q ss_pred HhhcCCCCccCchhHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQK 484 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~ 484 (495)
...|.+.+|.+||++.++.+.++.
T Consensus 259 i~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 259 MTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHcccCcccCcCHHHHHHHhhc
Confidence 889999999999999999888763
No 143
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=97.56 E-value=6.9e-05 Score=71.07 Aligned_cols=82 Identities=20% Similarity=0.336 Sum_probs=53.4
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.++||||||+++.|++| |+.|..... -.+.+.......... . ...+...+.++
T Consensus 197 ~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~~~~~~~~~~--~-------------~~~~~~~~~~l 256 (280)
T cd05092 197 LYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLS-----NTEAIECITQGRELE--R-------------PRTCPPEVYAI 256 (280)
T ss_pred ccCCcCchhhHHHHHHHHHHHHcCCCCCCccCC-----HHHHHHHHHcCccCC--C-------------CCCCCHHHHHH
Confidence 34456788999999999999998 777753211 111121111110000 0 01223447788
Q ss_pred HhhcCCCCccCchhHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
...|.+.+|.+||++.||.+.|+
T Consensus 257 i~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 257 MQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHccCChhhCCCHHHHHHHHh
Confidence 99999999999999999998875
No 144
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=97.55 E-value=3.2e-05 Score=72.02 Aligned_cols=82 Identities=24% Similarity=0.415 Sum_probs=53.4
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
..+..+.++||||||+++.|+++ |+.|.+.... ............. . ....+...+.++
T Consensus 169 ~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~------~~~~~~~~~~~~~----~----------~~~~~~~~~~~l 228 (252)
T cd05084 169 NYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN------QQTREAIEQGVRL----P----------CPELCPDAVYRL 228 (252)
T ss_pred cCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH------HHHHHHHHcCCCC----C----------CcccCCHHHHHH
Confidence 44556778999999999999998 7777543211 1111111111000 0 011223457889
Q ss_pred HhhcCCCCccCchhHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
...|...+|.+||++.+|.++|+
T Consensus 229 i~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 229 MERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHcCCChhhCcCHHHHHHHHh
Confidence 99999999999999999998875
No 145
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=97.55 E-value=0.0001 Score=69.74 Aligned_cols=85 Identities=16% Similarity=0.286 Sum_probs=58.1
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.+..+.++|+||||+++.|++| |+.|++.. +..++.......... ..+ ..+...+..+.
T Consensus 185 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-----~~~~~~~~~~~~~~~--~~~-------------~~~~~~~~~~~ 244 (279)
T cd05057 185 HRIYTHKSDVWSYGVTVWELMTFGAKPYEGI-----PAVEIPDLLEKGERL--PQP-------------PICTIDVYMVL 244 (279)
T ss_pred cCCcCchhhHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHHHhCCCCC--CCC-------------CCCCHHHHHHH
Confidence 3456778999999999999999 99986532 222333222211110 000 01233477889
Q ss_pred hhcCCCCccCchhHHHHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQKLET 487 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~i~~ 487 (495)
..|...+|.+||++.++++.++++..
T Consensus 245 ~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 245 VKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred HHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 99999999999999999999988754
No 146
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.55 E-value=7.9e-05 Score=69.72 Aligned_cols=86 Identities=21% Similarity=0.322 Sum_probs=56.0
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|.....+.+.++|+||||+++.|+++ |+.|.... +-....+......... . .......+
T Consensus 173 E~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~-----~~~~~~~~~~~~~~~~-----~----------~~~~~~~~ 232 (260)
T cd05070 173 EAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM-----NNREVLEQVERGYRMP-----C----------PQDCPISL 232 (260)
T ss_pred HHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHHHcCCCCC-----C----------CCcCCHHH
Confidence 33334567789999999999999999 77775431 1112222211110000 0 01223457
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQK 484 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~ 484 (495)
.++...|...+|.+||+|.++++.|+.
T Consensus 233 ~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 233 HELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 889999999999999999999888764
No 147
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=97.55 E-value=5.7e-05 Score=70.43 Aligned_cols=78 Identities=17% Similarity=0.198 Sum_probs=53.7
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+||||+++.|+++|+.|.. ..+..+++..........+ .+ .....+.++..
T Consensus 176 ~~~~~~~~Dv~slG~il~~l~~g~~p~~-----~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~i~ 235 (257)
T cd08225 176 NRPYNNKTDIWSLGCVLYELCTLKHPFE-----GNNLHQLVLKICQGYFAPI-SP--------------NFSRDLRSLIS 235 (257)
T ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCC-----CccHHHHHHHHhcccCCCC-CC--------------CCCHHHHHHHH
Confidence 3456778999999999999999999853 2344566655443322111 00 01123667778
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||++.|+++
T Consensus 236 ~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 236 QLFKVSPRDRPSITSILK 253 (257)
T ss_pred HHhccChhhCcCHHHHhh
Confidence 899999999999999865
No 148
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=97.55 E-value=5.4e-05 Score=71.94 Aligned_cols=86 Identities=16% Similarity=0.253 Sum_probs=56.2
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCC------CCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNG------EMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSF 456 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~------~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~ 456 (495)
.+..+.++|+||||+++.|++||+.|.+..... ...+..+++....... +.+ ...+....
T Consensus 176 ~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---------~~~~~~~~ 241 (284)
T cd06620 176 GGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP-----PRL---------PSSDFPED 241 (284)
T ss_pred cCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC-----CCC---------CchhcCHH
Confidence 346677999999999999999999997643321 1122334433332210 111 00112344
Q ss_pred HHHHHhhcCCCCccCchhHHHHHHHH
Q 011044 457 VFNLAMECTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 457 ~~~~~~~C~~~~p~~Rp~m~~v~~~l 482 (495)
+..+...|...+|.+||++.||+++.
T Consensus 242 ~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 242 LRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred HHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 77788899999999999999998764
No 149
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=97.53 E-value=4.8e-05 Score=71.22 Aligned_cols=86 Identities=20% Similarity=0.290 Sum_probs=55.2
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|....+..+.++|+||||+++.|++| |+.|...... .....+....... .. .......+
T Consensus 173 e~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~~--------~~----------~~~~~~~~ 232 (260)
T cd05069 173 EAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN--REVLEQVERGYRM--------PC----------PQGCPESL 232 (260)
T ss_pred HHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCCC--------CC----------CcccCHHH
Confidence 33344567788999999999999999 7877543211 1111222111100 00 00122346
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQK 484 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~ 484 (495)
.++...|...+|.+||++.+|++.|+.
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 233 HELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 678889999999999999999988864
No 150
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=97.53 E-value=8e-05 Score=69.44 Aligned_cols=82 Identities=22% Similarity=0.426 Sum_probs=54.3
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
..+..+.++|+||||+++.|+++ |+.|... .+...+..........+. ...+...+.++
T Consensus 170 ~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~-----~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l 229 (254)
T cd05083 170 KHKKFSSKSDVWSYGVLLWEVFSYGRAPYPK-----MSLKEVKECVEKGYRMEP---------------PEGCPADVYVL 229 (254)
T ss_pred ccCCcCchhhHHHHHHHHHHHHhCCCCCCcc-----CCHHHHHHHHhCCCCCCC---------------CCcCCHHHHHH
Confidence 34556778999999999999997 8777532 222233222211110000 01123447789
Q ss_pred HhhcCCCCccCchhHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
...|.+.+|..||++.++++.++
T Consensus 230 i~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 230 MTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred HHHHcCCChhhCcCHHHHHHHHc
Confidence 99999999999999999998875
No 151
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=97.53 E-value=7.9e-05 Score=70.18 Aligned_cols=84 Identities=15% Similarity=0.319 Sum_probs=56.1
Q ss_pred ccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 384 GRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
...+.++||||||+++.|+++ |+.|.+.... .....+++... .. . . ...+...+.++..
T Consensus 183 ~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~~~~~~~~~~~--~~-~-----~----------~~~~~~~~~~li~ 242 (270)
T cd05056 183 RRFTSASDVWMFGVCMWEILMLGVKPFQGVKN--NDVIGRIENGE--RL-P-----M----------PPNCPPTLYSLMT 242 (270)
T ss_pred CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHcCC--cC-C-----C----------CCCCCHHHHHHHH
Confidence 345678999999999999996 8888643221 11222222110 00 0 0 0122345778889
Q ss_pred hcCCCCccCchhHHHHHHHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQDSQKLET 487 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~l~~i~~ 487 (495)
.|...+|.+||++.+++..|+.++.
T Consensus 243 ~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 243 KCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred HHcCCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999988764
No 152
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=97.52 E-value=7.1e-05 Score=69.84 Aligned_cols=84 Identities=26% Similarity=0.466 Sum_probs=54.4
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
..+..+.++|+||||+++.|+++ |+.|.... +...-............ .......+.++
T Consensus 172 ~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l 231 (256)
T cd05039 172 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPHVEKGYRMEA---------------PEGCPPEVYKV 231 (256)
T ss_pred cCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHHhcCCCCCC---------------ccCCCHHHHHH
Confidence 34456678999999999999997 88885421 21111111111100000 01123447788
Q ss_pred HhhcCCCCccCchhHHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
...|+..+|.+||++.|++++|+.+
T Consensus 232 i~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 232 MKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred HHHHhccChhhCcCHHHHHHHHhcC
Confidence 9999999999999999999998753
No 153
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=97.51 E-value=9.6e-05 Score=69.57 Aligned_cols=83 Identities=13% Similarity=0.225 Sum_probs=49.7
Q ss_pred cccCCCcceeehhhhhhcccC-CCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 385 RVSTNGDIYNFGIMIMETFTA-KKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tg-k~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
..+.++||||||+++.|++++ +.|.+. .+-..++..........+.++.+.... ...+.++...
T Consensus 184 ~~~~~~DiwslG~~l~el~~~~~~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~ 248 (268)
T cd05086 184 EQTKPSNVWALGVTLWELFENAAQPYSH-----LSDREVLNHVIKDQQVKLFKPQLELPY----------SERWYEVLQF 248 (268)
T ss_pred CCCCcchhHHHHHHHHHHHhCCCCCCCC-----CCHHHHHHHHHhhcccccCCCccCCCC----------cHHHHHHHHH
Confidence 346789999999999999975 445432 122334444333333333444332111 1123445556
Q ss_pred cCCCCccCchhHHHHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~~l~ 483 (495)
|. .+|.+||++++|++.|.
T Consensus 249 c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 249 CW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred Hh-hCcccCCCHHHHHHHhc
Confidence 76 56999999999988763
No 154
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.51 E-value=7e-05 Score=69.96 Aligned_cols=81 Identities=17% Similarity=0.301 Sum_probs=52.6
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
..+..+.++||||||+++.|++| |+.|.... +-.............. .+. .....+.++
T Consensus 174 ~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~-----~~~~~~~~~~~~~~~~--~~~-------------~~~~~~~~l 233 (256)
T cd05113 174 LYSKFSSKSDVWAFGVLMWEVYSLGKMPYERF-----NNSETVEKVSQGLRLY--RPH-------------LASEKVYAI 233 (256)
T ss_pred hcCcccchhHHHHHHHHHHHHhcCCCCCcCcC-----CHHHHHHHHhcCCCCC--CCC-------------CCCHHHHHH
Confidence 34456778999999999999999 88885421 1112222111111000 000 112347788
Q ss_pred HhhcCCCCccCchhHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l 482 (495)
...|...+|.+||++.++++.+
T Consensus 234 i~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 234 MYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred HHHHcCCCcccCCCHHHHHHhh
Confidence 9999999999999999998776
No 155
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=97.51 E-value=8.7e-05 Score=70.14 Aligned_cols=82 Identities=21% Similarity=0.415 Sum_probs=54.5
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
..+..+.++|||+||+++.|++| |+.|.... ....+.+++. ...... . ...+...+.++
T Consensus 194 ~~~~~~~~~Di~slG~il~el~t~g~~p~~~~--~~~~~~~~~~---~~~~~~-----~----------~~~~~~~~~~l 253 (277)
T cd05032 194 KDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL--SNEEVLKFVI---DGGHLD-----L----------PENCPDKLLEL 253 (277)
T ss_pred hcCCCCcccchHHHHHHHHHhhccCCCCCccC--CHHHHHHHHh---cCCCCC-----C----------CCCCCHHHHHH
Confidence 34556788999999999999998 77775321 1112222222 111100 0 01123458899
Q ss_pred HhhcCCCCccCchhHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
...|...+|.+||++.++++.|+
T Consensus 254 i~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 254 MRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHcCCChhhCCCHHHHHHHhc
Confidence 99999999999999999998875
No 156
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=97.51 E-value=8.1e-05 Score=70.27 Aligned_cols=83 Identities=14% Similarity=0.224 Sum_probs=51.7
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVF 458 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~ 458 (495)
|.......+.++|||+||+++.|++||+.|.+.... ..............+.+. .....+.
T Consensus 168 E~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~--------------~~~~~~~ 228 (274)
T cd06609 168 EVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP-----MRVLFLIPKNNPPSLEGN--------------KFSKPFK 228 (274)
T ss_pred hhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch-----HHHHHHhhhcCCCCCccc--------------ccCHHHH
Confidence 433444577899999999999999999999643211 111111111110011000 0122366
Q ss_pred HHHhhcCCCCccCchhHHHHHH
Q 011044 459 NLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 459 ~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
++...|...+|.+||+++++++
T Consensus 229 ~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 229 DFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHHHHHhhCChhhCcCHHHHhh
Confidence 7788899999999999999964
No 157
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.50 E-value=0.00011 Score=68.77 Aligned_cols=82 Identities=22% Similarity=0.326 Sum_probs=54.5
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.+..+.++|+||||+++.|+++ |+.|.... +-...++.........+ .......+.++.
T Consensus 177 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~li 236 (260)
T cd05067 177 YGTFTIKSDVWSFGILLTEIVTYGRIPYPGM-----TNPEVIQNLERGYRMPR---------------PDNCPEELYELM 236 (260)
T ss_pred cCCcCcccchHHHHHHHHHHHhCCCCCCCCC-----ChHHHHHHHHcCCCCCC---------------CCCCCHHHHHHH
Confidence 4456778999999999999999 88886432 22222222211110000 001123478889
Q ss_pred hhcCCCCccCchhHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQK 484 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~ 484 (495)
..|...+|.+||++.+++..|+.
T Consensus 237 ~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 237 RLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHccCChhhCCCHHHHHHHhhc
Confidence 99999999999999999988763
No 158
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=97.49 E-value=8.4e-05 Score=69.23 Aligned_cols=77 Identities=14% Similarity=0.226 Sum_probs=51.7
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++||||||+++.|+++|+.|.+. .+....+..........+.+ .....+.++...
T Consensus 176 ~~~~~~~Dv~slG~~l~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~~li~~ 235 (256)
T cd08220 176 KPYNQKSDIWALGCVLYELASLKRAFEA-----ANLPALVLKIMSGTFAPISD---------------RYSPDLRQLILS 235 (256)
T ss_pred CCCCcccchHHHHHHHHHHHhCCCCccc-----CchHHHHHHHHhcCCCCCCC---------------CcCHHHHHHHHH
Confidence 4456789999999999999999988532 23333443332221111100 112336788899
Q ss_pred cCCCCccCchhHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQ 480 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~ 480 (495)
|...+|.+||++.|+++
T Consensus 236 ~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 236 MLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HccCChhhCCCHHHHhh
Confidence 99999999999999865
No 159
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.49 E-value=0.0001 Score=69.16 Aligned_cols=86 Identities=21% Similarity=0.327 Sum_probs=55.9
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|....+..+.++||||||+++.|++| |+.|.... .+ .+........... . ...++...+
T Consensus 173 E~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~----~~-~~~~~~~~~~~~~-----~----------~~~~~~~~l 232 (262)
T cd05071 173 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM----VN-REVLDQVERGYRM-----P----------CPPECPESL 232 (262)
T ss_pred hHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC----Ch-HHHHHHHhcCCCC-----C----------CccccCHHH
Confidence 33345567889999999999999999 66664321 11 1111111111000 0 011234457
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQK 484 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~ 484 (495)
.++...|.+.+|.+||++.++.+.|+.
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 233 HDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred HHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 899999999999999999999998875
No 160
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=97.49 E-value=0.0001 Score=68.82 Aligned_cols=79 Identities=11% Similarity=0.175 Sum_probs=53.0
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.....+.++||||||+++.|++||+.|.+. .+...++..........+ .. .....+.++.
T Consensus 175 ~~~~~~~~~Dv~slG~il~~l~~g~~~~~~-----~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~li 234 (257)
T cd08223 175 SNKPYNYKSDVWALGCCVYEMATLKHAFNA-----KDMNSLVYRIIEGKLPPM-PK--------------DYSPELGELI 234 (257)
T ss_pred cCCCCCchhhhHHHHHHHHHHHcCCCCCCC-----CCHHHHHHHHHhcCCCCC-cc--------------ccCHHHHHHH
Confidence 344567789999999999999999988542 233344433322211110 00 1123477889
Q ss_pred hhcCCCCccCchhHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~ 480 (495)
..|.+.+|.+||++.++++
T Consensus 235 ~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 235 ATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred HHHhccCcccCCCHHHHhc
Confidence 9999999999999999875
No 161
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=97.47 E-value=5.6e-05 Score=70.44 Aligned_cols=80 Identities=23% Similarity=0.303 Sum_probs=49.4
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|||+||+++.|++||+.|....... ..... ..... .+.+. ........+.++..
T Consensus 173 ~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~----~~~~~--~~~~~----~~~~~--------~~~~~~~~~~~~i~ 234 (256)
T cd06612 173 EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM----RAIFM--IPNKP----PPTLS--------DPEKWSPEFNDFVK 234 (256)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh----hhhhh--hccCC----CCCCC--------chhhcCHHHHHHHH
Confidence 345677899999999999999999996532111 01100 00000 00000 00011223677788
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|.+.+|.+||++.||++
T Consensus 235 ~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 235 KCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHHhcChhhCcCHHHHhc
Confidence 999999999999999864
No 162
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.46 E-value=8.3e-05 Score=69.62 Aligned_cols=83 Identities=22% Similarity=0.358 Sum_probs=54.1
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
..+..+.++|+||||+++.|++| |+.|....- ...+..+++.... .... ......+.++
T Consensus 176 ~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~~~~~---~~~~---------------~~~~~~~~~~ 235 (260)
T cd05073 176 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALERGYR---MPRP---------------ENCPEELYNI 235 (260)
T ss_pred ccCCcCccccchHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHhCCCC---CCCc---------------ccCCHHHHHH
Confidence 34456778999999999999999 777753211 1122222221111 0000 0112347788
Q ss_pred HhhcCCCCccCchhHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQK 484 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~ 484 (495)
...|...+|.+||++.++.+.|+.
T Consensus 236 i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 236 MMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHcccCcccCcCHHHHHHHHhc
Confidence 899999999999999999998874
No 163
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=97.44 E-value=9.3e-05 Score=72.50 Aligned_cols=85 Identities=15% Similarity=0.324 Sum_probs=54.6
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++|+|+||+++.|+++ |..|...... . ....+.......... +. .....+.++.
T Consensus 255 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~-~~~~~~~~~~~~~~~--~~-------------~~~~~~~~~~ 315 (343)
T cd05103 255 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---D-EEFCRRLKEGTRMRA--PD-------------YTTPEMYQTM 315 (343)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc---c-HHHHHHHhccCCCCC--CC-------------CCCHHHHHHH
Confidence 3456778999999999999997 8888643211 0 111111111100000 00 0112377889
Q ss_pred hhcCCCCccCchhHHHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
..|.+.+|.+||++.|+++.|+.+-
T Consensus 316 ~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 316 LDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999999998764
No 164
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=97.43 E-value=0.00012 Score=68.28 Aligned_cols=80 Identities=20% Similarity=0.385 Sum_probs=53.1
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++||||+|+++.|+++ |+.|.+.. +-....+......... . ...+...+.++.
T Consensus 181 ~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----~~~~~~~~~~~~~~~~-----~----------~~~~~~~~~~li 240 (262)
T cd00192 181 DGIFTSKSDVWSFGVLLWEIFTLGATPYPGL-----SNEEVLEYLRKGYRLP-----K----------PEYCPDELYELM 240 (262)
T ss_pred cCCcchhhccHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHHHcCCCCC-----C----------CccCChHHHHHH
Confidence 3356778999999999999999 58886542 2222222222111000 0 011234477889
Q ss_pred hhcCCCCccCchhHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l 482 (495)
..|...+|.+||++.|+++.|
T Consensus 241 ~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 241 LSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred HHHccCCcccCcCHHHHHHhh
Confidence 999999999999999998876
No 165
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=97.43 E-value=0.00013 Score=69.45 Aligned_cols=87 Identities=17% Similarity=0.296 Sum_probs=57.1
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|....+..+.++||||||+++.|+++ |+.|... ..-.++.+......... . .+.+...+
T Consensus 191 E~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~-----~~~~~~~~~~~~~~~~~-----~----------~~~~~~~~ 250 (288)
T cd05061 191 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG-----LSNEQVLKFVMDGGYLD-----Q----------PDNCPERV 250 (288)
T ss_pred HHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCC-----CCHHHHHHHHHcCCCCC-----C----------CCCCCHHH
Confidence 33334556778999999999999998 5666432 22233333222111100 0 11223458
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
.++...|...+|.+||+|.++++.++..
T Consensus 251 ~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 251 TDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 8899999999999999999998888764
No 166
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.41 E-value=0.00013 Score=69.85 Aligned_cols=80 Identities=20% Similarity=0.258 Sum_probs=49.8
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|||+|||++.|+++|+.|... ......+.... ......+-++ ......+.++..
T Consensus 190 ~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~----~~~~~~~~~~~-~~~~~~~~~~-------------~~~~~~l~~li~ 251 (296)
T cd06654 190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLN----ENPLRALYLIA-TNGTPELQNP-------------EKLSAIFRDFLN 251 (296)
T ss_pred CCCCCccchHHHHHHHHHHHHhCCCCCCC----CCHHHhHHHHh-cCCCCCCCCc-------------cccCHHHHHHHH
Confidence 34456789999999999999999999643 11222222111 1110000000 011123567788
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||++.++++
T Consensus 252 ~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 252 RCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred HHCcCCcccCcCHHHHhh
Confidence 999999999999999965
No 167
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=97.40 E-value=0.00015 Score=68.69 Aligned_cols=80 Identities=15% Similarity=0.237 Sum_probs=52.7
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.....+.++||||||+++.|++||+.|....... ..+........ +. ........+.++.
T Consensus 174 ~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~-----~~----------~~~~~~~~~~~li 233 (277)
T cd06640 174 QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-----RVLFLIPKNNP-----PT----------LTGEFSKPFKEFI 233 (277)
T ss_pred ccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-----hHhhhhhcCCC-----CC----------CchhhhHHHHHHH
Confidence 3445678899999999999999999986432211 11111100000 00 1113445577899
Q ss_pred hhcCCCCccCchhHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQD 481 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~ 481 (495)
..|...+|.+||++.++++.
T Consensus 234 ~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 234 DACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HHHcccCcccCcCHHHHHhC
Confidence 99999999999999999653
No 168
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=97.39 E-value=0.00023 Score=67.41 Aligned_cols=88 Identities=15% Similarity=0.223 Sum_probs=53.6
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCccccCCC--CCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGE--MTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSF 456 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~--~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~ 456 (495)
|.......+.++||||||+++.|++||+.|.+..+... .....+.+...... .+.+... .....
T Consensus 163 E~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---------~~~~~ 228 (279)
T cd06619 163 ERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-----PPVLPVG---------QFSEK 228 (279)
T ss_pred eeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-----CCCCCCC---------cCCHH
Confidence 33334456789999999999999999999976543221 11112222111110 0111000 01123
Q ss_pred HHHHHhhcCCCCccCchhHHHHHH
Q 011044 457 VFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 457 ~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
+.++...|...+|..||++.|+++
T Consensus 229 ~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 229 FVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred HHHHHHHHhhCChhhCCCHHHHhc
Confidence 567788899999999999999964
No 169
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=97.39 E-value=0.00016 Score=64.23 Aligned_cols=92 Identities=16% Similarity=0.264 Sum_probs=65.4
Q ss_pred hhhcCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHH
Q 011044 377 LWEYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSF 456 (495)
Q Consensus 377 l~~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~ 456 (495)
++.+.....++++.||||+||.+-+|.-|..|.+..+..|-++ .+.|..+.+.-..+. -.-..
T Consensus 209 Lf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSl-----------aLAv~n~q~s~P~~~------~yse~ 271 (302)
T KOG2345|consen 209 LFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSL-----------ALAVQNAQISIPNSS------RYSEA 271 (302)
T ss_pred heecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeE-----------EEeeeccccccCCCC------CccHH
Confidence 4566677889999999999999999999999987655433221 133444443211110 12344
Q ss_pred HHHHHhhcCCCCccCchhHHHHHHHHHHH
Q 011044 457 VFNLAMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 457 ~~~~~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
+.++..+|...+|.+||+..+++..++.+
T Consensus 272 l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 272 LHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred HHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 78889999999999999999998877653
No 170
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=97.38 E-value=0.00016 Score=67.61 Aligned_cols=78 Identities=14% Similarity=0.135 Sum_probs=51.7
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+|+||+++.|+++|+.|.+..- ...+.+......... + .......+.++..
T Consensus 184 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~-----~----------~~~~~~~~~~l~~ 243 (265)
T cd08217 184 HMSYDEKSDIWSLGCLIYELCALSPPFTARN-----QLQLASKIKEGKFRR-----I----------PYRYSSELNEVIK 243 (265)
T ss_pred CCCCCchhHHHHHHHHHHHHHHCCCcccCcC-----HHHHHHHHhcCCCCC-----C----------ccccCHHHHHHHH
Confidence 3446778999999999999999999965321 222222211111100 0 0112344778899
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||+|.+|++
T Consensus 244 ~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 244 SMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred HHccCCcccCCCHHHHhh
Confidence 999999999999999975
No 171
>PHA02882 putative serine/threonine kinase; Provisional
Probab=97.36 E-value=5.8e-05 Score=72.17 Aligned_cols=83 Identities=14% Similarity=0.167 Sum_probs=54.2
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHH-----HHHHHHhCCCcceeeeccccccccccccchhhHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLR-----RWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSF 456 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~-----~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~ 456 (495)
.....+.++|||||||++.|++||+.|+...-..+ .+. ++++....... . ...+...
T Consensus 206 ~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~----------------~~~~~~~ 267 (294)
T PHA02882 206 NGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-NLIHAAKCDFIKRLHEGKI-K----------------IKNANKF 267 (294)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch-HHHHHhHHHHHHHhhhhhh-c----------------cCCCCHH
Confidence 34456788999999999999999999975431111 111 12211111110 0 1123345
Q ss_pred HHHHHhhcCCCCccCchhHHHHHHHH
Q 011044 457 VFNLAMECTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 457 ~~~~~~~C~~~~p~~Rp~m~~v~~~l 482 (495)
+.++.-.|...+|.+||++.++++.+
T Consensus 268 ~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 268 IYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 77888899999999999999998765
No 172
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=97.36 E-value=0.00013 Score=68.48 Aligned_cols=81 Identities=19% Similarity=0.232 Sum_probs=50.4
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
..+.++|+|+||+++.|+++|+.|...... ...+.++++. . .+.+.... ........+.++...|
T Consensus 183 ~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-~~~~~~~~~~----~-----~~~~~~~~-----~~~~~~~~~~~li~~~ 247 (267)
T cd06610 183 GYDFKADIWSFGITAIELATGAAPYSKYPP-MKVLMLTLQN----D-----PPSLETGA-----DYKKYSKSFRKMISLC 247 (267)
T ss_pred CcCcccchHhHhHHHHHHHhCCCCccccCh-hhhHHHHhcC----C-----CCCcCCcc-----ccccccHHHHHHHHHH
Confidence 457789999999999999999999754221 1112222211 1 00010000 0011234467888899
Q ss_pred CCCCccCchhHHHHHH
Q 011044 465 TVESPIRESTQRKLLQ 480 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~~ 480 (495)
...+|.+||++.++++
T Consensus 248 l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 248 LQKDPSKRPTAEELLK 263 (267)
T ss_pred cCCChhhCcCHHHHhh
Confidence 9999999999999864
No 173
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=97.36 E-value=0.00016 Score=72.35 Aligned_cols=84 Identities=17% Similarity=0.300 Sum_probs=54.2
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++|||+|||++.|+++ |+.|.... .............. ....+ ..+...+.++.
T Consensus 315 ~~~~~~~~DvwslGvil~e~l~~g~~P~~~~-----~~~~~~~~~~~~~~-~~~~p-------------~~~~~~l~~li 375 (401)
T cd05107 315 NNLYTTLSDVWSFGILLWEIFTLGGTPYPEL-----PMNEQFYNAIKRGY-RMAKP-------------AHASDEIYEIM 375 (401)
T ss_pred CCCCCcHhHHHHHHHHHHHHHHcCCCCCCCC-----CchHHHHHHHHcCC-CCCCC-------------CCCCHHHHHHH
Confidence 3456778999999999999998 77785431 11111111111110 00000 01123477888
Q ss_pred hhcCCCCccCchhHHHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
..|...+|.+||+|.++++.|+.+
T Consensus 376 ~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 376 QKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred HHHcCCChhHCcCHHHHHHHHHHH
Confidence 899999999999999999999875
No 174
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=97.36 E-value=0.00015 Score=76.41 Aligned_cols=88 Identities=22% Similarity=0.339 Sum_probs=59.4
Q ss_pred hcCCCccccCCCcceeehhhhhhcccC-CCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTA-KKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tg-k~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|.-.....+.++|||||||+|.|++|- ..|.-. .....++.+|++...+ ++ ..+.|...+
T Consensus 491 Esl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~-~~~~~~l~~~l~~G~r---~~---------------~P~~c~~ei 551 (609)
T KOG0200|consen 491 ESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG-IPPTEELLEFLKEGNR---ME---------------QPEHCSDEI 551 (609)
T ss_pred HHhccCcccccchhhHHHHHHHHHhhCCCCCCCC-CCcHHHHHHHHhcCCC---CC---------------CCCCCCHHH
Confidence 444456678899999999999999985 445422 1111122333332221 10 122466668
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
..+...|-..+|.+||++.+.++.++..
T Consensus 552 Y~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 552 YDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred HHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 8999999999999999999999888763
No 175
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.36 E-value=9.2e-06 Score=73.09 Aligned_cols=100 Identities=22% Similarity=0.286 Sum_probs=71.9
Q ss_pred CCeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEE
Q 011044 55 HRVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLF 134 (495)
Q Consensus 55 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~ 134 (495)
.++++|++-||+++++ .....++.|++|.|+-|+|+.. ..+..|++|+.|+|..|.|...-.-....++++|+.|.
T Consensus 19 ~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LW 94 (388)
T KOG2123|consen 19 ENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLW 94 (388)
T ss_pred HHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHh
Confidence 4688888889998865 4466899999999999998743 34788899999999999885433334445688888888
Q ss_pred cccccCCccCCc-----ccCCCCCCCEEE
Q 011044 135 LKYNMFHGKIPS-----TLSSCKQLRELS 158 (495)
Q Consensus 135 l~~n~l~~~~~~-----~l~~l~~L~~L~ 158 (495)
|..|.-.+..+. .+.-+|+|+.||
T Consensus 95 L~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 95 LDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hccCCcccccchhHHHHHHHHcccchhcc
Confidence 888776554332 234556666654
No 176
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=97.35 E-value=0.00015 Score=72.28 Aligned_cols=86 Identities=20% Similarity=0.211 Sum_probs=58.7
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
.+..+|||+|||+..||+||.-|.-.. .++.+.-++-...... ........|..+|-++...|.
T Consensus 570 fS~qSDVYaFGiV~YELltg~lPysi~--------------~~dqIifmVGrG~l~p--d~s~~~s~~pk~mk~Ll~~C~ 633 (678)
T KOG0193|consen 570 FSFQSDVYAFGIVWYELLTGELPYSIQ--------------NRDQIIFMVGRGYLMP--DLSKIRSNCPKAMKRLLSDCW 633 (678)
T ss_pred CCcccchhhhhHHHHHHHhCcCCcCCC--------------ChhheEEEecccccCc--cchhhhccCHHHHHHHHHHHH
Confidence 456799999999999999999885411 1122222222211100 000012257888999999999
Q ss_pred CCCccCchhHHHHHHHHHHHHH
Q 011044 466 VESPIRESTQRKLLQDSQKLET 487 (495)
Q Consensus 466 ~~~p~~Rp~m~~v~~~l~~i~~ 487 (495)
..++.+||.+.+++.+|+.+..
T Consensus 634 ~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 634 KFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred hcCcccCccHHHHHHHHHHhhh
Confidence 9999999999999998887654
No 177
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.33 E-value=2.1e-05 Score=70.79 Aligned_cols=101 Identities=28% Similarity=0.299 Sum_probs=64.4
Q ss_pred cccccEEEecCCcCCCcCchhhhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCcccccc
Q 011044 199 LAELEMLWLQNNSLTGTIPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTL 278 (495)
Q Consensus 199 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 278 (495)
+.+.++|+..||.++.. .....++.|+.|.|+-|.|+..-| +..|++|++|+|..|.|....-.....++++|+.|
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhH
Confidence 44566677777776532 344567777777777777765433 67777888888877777633233344567778888
Q ss_pred ccccceeeecccc-----cccCCCCCCeee
Q 011044 279 SLYVNDFSGAIPK-----EIGNLTKLTDLY 303 (495)
Q Consensus 279 ~L~~n~l~~~~~~-----~l~~l~~L~~L~ 303 (495)
.|..|...+..+. .+.-+|+|+.||
T Consensus 94 WL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 94 WLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hhccCCcccccchhHHHHHHHHcccchhcc
Confidence 8877766554332 345566776664
No 178
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.31 E-value=0.00022 Score=66.25 Aligned_cols=81 Identities=19% Similarity=0.410 Sum_probs=52.4
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.+..+.++|+||||+++.|++| |..|.... ....+........ .... .......+.++.
T Consensus 169 ~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~-----~~~~~~~~~~~~~--~~~~-------------~~~~~~~~~~li 228 (251)
T cd05041 169 YGRYTSESDVWSYGILLWETFSLGDTPYPGM-----SNQQTRERIESGY--RMPA-------------PQLCPEEIYRLM 228 (251)
T ss_pred cCCCCcchhHHHHHHHHHHHHhccCCCCccC-----CHHHHHHHHhcCC--CCCC-------------CccCCHHHHHHH
Confidence 3456778999999999999999 67775321 1111111111110 0000 011234577889
Q ss_pred hhcCCCCccCchhHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
..|...+|.+||++.|+++.|+
T Consensus 229 ~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 229 LQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHhccChhhCcCHHHHHHHhh
Confidence 9999999999999999998875
No 179
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=97.31 E-value=0.00021 Score=67.24 Aligned_cols=77 Identities=14% Similarity=0.223 Sum_probs=49.0
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
..+.++|||||||++.|+++|+.|.+.. .....+.... ... ..... ...+...+.++...|
T Consensus 192 ~~~~~~Dv~slGv~l~el~~g~~p~~~~----~~~~~~~~~~-~~~-----~~~~~---------~~~~~~~~~~li~~~ 252 (272)
T cd06637 192 TYDFKSDLWSLGITAIEMAEGAPPLCDM----HPMRALFLIP-RNP-----APRLK---------SKKWSKKFQSFIESC 252 (272)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcccc----CHHHHHHHHh-cCC-----CCCCC---------CCCcCHHHHHHHHHH
Confidence 4567899999999999999999996432 1111221110 000 00010 001223467788899
Q ss_pred CCCCccCchhHHHHHH
Q 011044 465 TVESPIRESTQRKLLQ 480 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~~ 480 (495)
...+|.+||++.++++
T Consensus 253 l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 253 LVKNHSQRPTTEQLMK 268 (272)
T ss_pred cCCChhhCCCHHHHhh
Confidence 9999999999999864
No 180
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.29 E-value=0.001 Score=54.78 Aligned_cols=105 Identities=23% Similarity=0.295 Sum_probs=38.6
Q ss_pred hccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEEcccccCCccCCcccCCCCC
Q 011044 74 ELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLFLKYNMFHGKIPSTLSSCKQ 153 (495)
Q Consensus 74 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 153 (495)
.|.++++|+.+.+.. .+.......|.++++|+.+.+.++ + ..++...+..+++|+.+.+.. .+.......|..+++
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~-~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~ 82 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-L-TSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTN 82 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-T-SCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TT
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-c-cccceeeeecccccccccccc-ccccccccccccccc
Confidence 345555555555543 233333344555555555555543 2 333444444454555555543 222222334444555
Q ss_pred CCEEEcccCcCccccCccccCCCCCCEEEcc
Q 011044 154 LRELSLSSNYFSGTIPKEIGNLTKLTRLNLR 184 (495)
Q Consensus 154 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~ 184 (495)
|+.+.+..+ +...-...|.++ +|+.+.+.
T Consensus 83 l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~ 111 (129)
T PF13306_consen 83 LKNIDIPSN-ITEIGSSSFSNC-NLKEINIP 111 (129)
T ss_dssp ECEEEETTT--BEEHTTTTTT--T--EEE-T
T ss_pred ccccccCcc-ccEEchhhhcCC-CceEEEEC
Confidence 555555433 332223334443 55555544
No 181
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=97.28 E-value=0.00021 Score=67.20 Aligned_cols=82 Identities=10% Similarity=0.215 Sum_probs=46.4
Q ss_pred ccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 386 VSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
.+.++|+||||+++.|+++ |+.|....... ....+ ........+.++.+.. ...+ .+..+.-.|
T Consensus 186 ~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~-------~~~~---~~~~l~~~c 250 (269)
T cd05087 186 QTKESNVWSLGVTIWELFELGSQPYRHLSDE--QVLTY---TVREQQLKLPKPRLKL-------PLSD---RWYEVMQFC 250 (269)
T ss_pred CCccchhHHHHHHHHHHHhCCCCCCCCCChH--HHHHH---HhhcccCCCCCCccCC-------CCCh---HHHHHHHHH
Confidence 4678999999999999996 98886432111 11111 1111111111222110 0111 133445567
Q ss_pred CCCCccCchhHHHHHHHHH
Q 011044 465 TVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~~~l~ 483 (495)
. .+|.+||++.||++.|.
T Consensus 251 ~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 251 W-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred h-cCcccCCCHHHHHHHhc
Confidence 5 57999999999998764
No 182
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=97.28 E-value=0.00027 Score=67.13 Aligned_cols=80 Identities=14% Similarity=0.184 Sum_probs=50.3
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++||||+||++.|++||+.|.... .....+.+. .........++. .+...+..+...
T Consensus 204 ~~~~~~~Dv~slGvi~~el~~g~~p~~~~----~~~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~li~~ 265 (286)
T cd06638 204 STYDARCDVWSLGITAIELGDGDPPLADL----HPMRALFKI-PRNPPPTLHQPE-------------LWSNEFNDFIRK 265 (286)
T ss_pred ccccchhhhhhHHHHHHHHhcCCCCCCCC----chhHHHhhc-cccCCCcccCCC-------------CcCHHHHHHHHH
Confidence 34577899999999999999999996432 111111110 000000111111 112236778899
Q ss_pred cCCCCccCchhHHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQD 481 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~~ 481 (495)
|.+.+|.+||++.|+++-
T Consensus 266 ~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 266 CLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred HccCCcccCCCHHHHhhc
Confidence 999999999999999753
No 183
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.27 E-value=0.00066 Score=55.91 Aligned_cols=13 Identities=46% Similarity=0.608 Sum_probs=4.3
Q ss_pred ccCCCCCcEEEcc
Q 011044 99 IFNMSSLLSIYFN 111 (495)
Q Consensus 99 l~~l~~L~~L~l~ 111 (495)
|.++++|+.+.+.
T Consensus 8 F~~~~~l~~i~~~ 20 (129)
T PF13306_consen 8 FYNCSNLESITFP 20 (129)
T ss_dssp TTT-TT--EEEET
T ss_pred HhCCCCCCEEEEC
Confidence 3344444444443
No 184
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=97.26 E-value=0.00017 Score=67.77 Aligned_cols=77 Identities=23% Similarity=0.333 Sum_probs=48.0
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
.+.++||||||+++.|+++|+.|....- ......|....... .+.+ .......+..+...|.
T Consensus 188 ~~~~~Dv~slGvvl~~l~~g~~p~~~~~--~~~~~~~~~~~~~~------~~~~----------~~~~~~~~~~li~~~l 249 (268)
T cd06624 188 YGAPADIWSLGCTIVEMATGKPPFIELG--EPQAAMFKVGMFKI------HPEI----------PESLSAEAKNFILRCF 249 (268)
T ss_pred CCchhhhHHHHHHHHHHHhCCCCCcccc--ChhhhHhhhhhhcc------CCCC----------CcccCHHHHHHHHHHc
Confidence 4578999999999999999999864321 11111111111110 0001 0011223667789999
Q ss_pred CCCccCchhHHHHHH
Q 011044 466 VESPIRESTQRKLLQ 480 (495)
Q Consensus 466 ~~~p~~Rp~m~~v~~ 480 (495)
..+|.+||++.|++.
T Consensus 250 ~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 250 EPDPDKRASAHDLLQ 264 (268)
T ss_pred CCCchhCCCHHHHHh
Confidence 999999999999864
No 185
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=97.26 E-value=0.00024 Score=66.74 Aligned_cols=79 Identities=15% Similarity=0.217 Sum_probs=46.7
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.....+.++||||||+++.|++||+.|.... .-...+........ .+.+- ..+...++..
T Consensus 182 ~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~-----~~~~~~~~~~~~~~----~~~~~-----------~~~~~~~~~l 241 (266)
T cd06651 182 SGEGYGRKADVWSLGCTVVEMLTEKPPWAEY-----EAMAAIFKIATQPT----NPQLP-----------SHISEHARDF 241 (266)
T ss_pred CCCCCCchhhhHHHHHHHHHHHHCCCCcccc-----chHHHHHHHhcCCC----CCCCc-----------hhcCHHHHHH
Confidence 3445677899999999999999999985421 11122222111110 11110 0111123334
Q ss_pred hhcCCCCccCchhHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~ 480 (495)
+.|...+|.+||+|.||++
T Consensus 242 i~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 242 LGCIFVEARHRPSAEELLR 260 (266)
T ss_pred HHHhcCChhhCcCHHHHhc
Confidence 4688889999999999853
No 186
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=97.25 E-value=0.00032 Score=65.63 Aligned_cols=82 Identities=16% Similarity=0.189 Sum_probs=51.9
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+|+||+++.|++||+.|+..... ....+-++.........+ +.. .....+.++..
T Consensus 174 ~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~-~~~-------------~~~~~l~~li~ 237 (264)
T cd06623 174 GESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFELMQAICDGPPPSL-PAE-------------EFSPEFRDFIS 237 (264)
T ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHHHHHHHhcCCCCCC-Ccc-------------cCCHHHHHHHH
Confidence 34567789999999999999999999754332 111121111111111000 000 02344777888
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||++.++++
T Consensus 238 ~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 238 ACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred HHccCChhhCCCHHHHHh
Confidence 899999999999999975
No 187
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=97.25 E-value=0.00017 Score=67.52 Aligned_cols=86 Identities=22% Similarity=0.362 Sum_probs=55.0
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|.......+.++|+||||+++.|++| |+.|.... .-....+......... ........+
T Consensus 174 E~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~-----~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 233 (261)
T cd05034 174 EAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM-----TNREVLEQVERGYRMP---------------RPPNCPEEL 233 (261)
T ss_pred HHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHcCCCCC---------------CCCCCCHHH
Confidence 33334456778999999999999998 88885321 1111222111110000 001123347
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQK 484 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~ 484 (495)
.++...|...+|.+||++.++++.++.
T Consensus 234 ~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 234 YDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 889999999999999999999888763
No 188
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=97.25 E-value=0.00021 Score=70.68 Aligned_cols=88 Identities=22% Similarity=0.285 Sum_probs=56.3
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVF 458 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~ 458 (495)
|.-...-+++|.|||||||+|-||+||..|+-..-.- ++=. .| -.+.+.- ....+|..-..
T Consensus 281 EvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss----------AIIw---GV-GsNsL~L-----pvPstcP~Gfk 341 (904)
T KOG4721|consen 281 EVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS----------AIIW---GV-GSNSLHL-----PVPSTCPDGFK 341 (904)
T ss_pred HHhhcCCcccccceehhHHHHHHHHhcCCCccccchh----------eeEE---ec-cCCcccc-----cCcccCchHHH
Confidence 4444556789999999999999999999996432100 0000 00 0111000 01224555566
Q ss_pred HHHhhcCCCCccCchhHHHHHHHHHHH
Q 011044 459 NLAMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 459 ~~~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
-+...|...-|+.||++++++.-|+-.
T Consensus 342 lL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 342 LLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred HHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 677889999999999999998776543
No 189
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.24 E-value=0.00021 Score=73.61 Aligned_cols=79 Identities=19% Similarity=0.310 Sum_probs=54.2
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.....+.++|||||||++.|+++|+.|.+ +.+...++.......... ..+ .....+..+.
T Consensus 218 ~~~~~s~k~DVwSlGvilyeLltG~~Pf~-----~~~~~~~~~~~~~~~~~~-~~~--------------~~~~~l~~li 277 (496)
T PTZ00283 218 RRKPYSKKADMFSLGVLLYELLTLKRPFD-----GENMEEVMHKTLAGRYDP-LPP--------------SISPEMQEIV 277 (496)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHCCCCCC-----CCCHHHHHHHHhcCCCCC-CCC--------------CCCHHHHHHH
Confidence 34456778999999999999999999964 234445554443322111 001 1123367888
Q ss_pred hhcCCCCccCchhHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~ 480 (495)
..|...+|.+||++.++++
T Consensus 278 ~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 278 TALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred HHHcccChhhCcCHHHHHh
Confidence 9999999999999999864
No 190
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=97.23 E-value=0.00025 Score=66.06 Aligned_cols=78 Identities=14% Similarity=0.181 Sum_probs=50.4
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++|+||||+++.|+++|+.|.+. .+....+..........+ .. .....+.++...
T Consensus 175 ~~~~~~~Dv~slG~i~~~l~~g~~p~~~-----~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~li~~ 234 (255)
T cd08219 175 MPYNNKSDIWSLGCILYELCTLKHPFQA-----NSWKNLILKVCQGSYKPL-PS--------------HYSYELRSLIKQ 234 (255)
T ss_pred CCcCchhhhhhhchhheehhhccCCCCC-----CCHHHHHHHHhcCCCCCC-Cc--------------ccCHHHHHHHHH
Confidence 3467789999999999999999999653 122222222221111100 00 011235677889
Q ss_pred cCCCCccCchhHHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQD 481 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~~ 481 (495)
|...+|.+||++.+++..
T Consensus 235 ~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 235 MFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHhCCcccCCCHHHHhhc
Confidence 999999999999999754
No 191
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=97.23 E-value=0.00029 Score=65.46 Aligned_cols=83 Identities=23% Similarity=0.241 Sum_probs=52.0
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhC-CCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLS-ISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~-~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|.......+.++|||+||+++.|+++|+.|.+... +...-+..... ..... + .......+
T Consensus 173 E~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~-----~----------~~~~~~~l 233 (260)
T cd06606 173 EVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG----NPMAALYKIGSSGEPPE-----I----------PEHLSEEA 233 (260)
T ss_pred hhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----chHHHHHhccccCCCcC-----C----------CcccCHHH
Confidence 44444447888999999999999999999965422 11111111110 00000 0 00112346
Q ss_pred HHHHhhcCCCCccCchhHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
.++...|.+.+|.+||++.|+++
T Consensus 234 ~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 234 KDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HHHHHHhCcCChhhCCCHHHHhh
Confidence 77788999999999999999864
No 192
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=97.23 E-value=0.00016 Score=74.22 Aligned_cols=88 Identities=15% Similarity=0.316 Sum_probs=63.1
Q ss_pred hhcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHH
Q 011044 378 WEYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSF 456 (495)
Q Consensus 378 ~~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~ 456 (495)
+|--...+.+..+|||||||++-|.++ |.+|.=++-. .+..+-+++-++- ....+|...
T Consensus 803 PEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN--QdVIkaIe~gyRL------------------PpPmDCP~a 862 (996)
T KOG0196|consen 803 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVIKAIEQGYRL------------------PPPMDCPAA 862 (996)
T ss_pred hhHhhhcccCchhhccccceEEEEecccCCCcccccch--HHHHHHHHhccCC------------------CCCCCCcHH
Confidence 344455678889999999999999886 7788533221 1222222222211 123378999
Q ss_pred HHHHHhhcCCCCccCchhHHHHHHHHHHH
Q 011044 457 VFNLAMECTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 457 ~~~~~~~C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
+-++.+.|.+.+..+||.+.++|..|+++
T Consensus 863 L~qLMldCWqkdR~~RP~F~qiV~~lDkl 891 (996)
T KOG0196|consen 863 LYQLMLDCWQKDRNRRPKFAQIVSTLDKL 891 (996)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 99999999999999999999999999875
No 193
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=97.22 E-value=0.0003 Score=67.69 Aligned_cols=78 Identities=17% Similarity=0.296 Sum_probs=49.9
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
+..+.++|||+||+++.|++||+.|.... +....+........ +.+ ....+...+..+...
T Consensus 189 ~~~~~~sDv~s~G~il~el~tg~~p~~~~-----~~~~~~~~~~~~~~-----~~~---------~~~~~~~~~~~li~~ 249 (307)
T cd06607 189 GQYDGKVDVWSLGITCIELAERKPPLFNM-----NAMSALYHIAQNDS-----PTL---------SSNDWSDYFRNFVDS 249 (307)
T ss_pred CCCCcccchHHHHHHHHHHHcCCCCCCCc-----cHHHHHHHHhcCCC-----CCC---------CchhhCHHHHHHHHH
Confidence 34667899999999999999999986421 11111111111100 000 011122346778889
Q ss_pred cCCCCccCchhHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQ 480 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~ 480 (495)
|...+|.+||+|.+++.
T Consensus 250 ~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 250 CLQKIPQDRPSSEELLK 266 (307)
T ss_pred HhcCChhhCcCHHHHhc
Confidence 99999999999999975
No 194
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=97.22 E-value=0.00019 Score=67.91 Aligned_cols=93 Identities=14% Similarity=0.085 Sum_probs=52.6
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCC------------cceeeeccccccccccccchh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSIS------------VMEVVDANLLSWKDKHFMTKE 451 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~------------~~~v~d~~l~~~~~~~~~~~~ 451 (495)
+..+.++|+|||||++.|+++|+.|.... +..+...+........ ......+........ ....
T Consensus 174 ~~~~~~~Di~slGv~l~el~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 249 (282)
T cd07831 174 GYYGPKMDIWAVGCVFFEILSLFPLFPGT--NELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLR--KLLP 249 (282)
T ss_pred CCCCcchhHHHHHHHHHHHHcCCcCCCCC--CHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHH--HHcc
Confidence 34567899999999999999998886431 1122222332222111 100000000000000 0001
Q ss_pred hHHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 452 QCMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 452 ~~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
.....+.++...|...+|.+||++.++++
T Consensus 250 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 250 NASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 22455788999999999999999999864
No 195
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=97.21 E-value=0.00027 Score=66.58 Aligned_cols=80 Identities=19% Similarity=0.330 Sum_probs=49.4
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
.+.++|||++|+++.|+++|+.|... ......+.+. ........++... ..+....+.++...|.
T Consensus 189 ~~~~~Dv~slG~~l~~l~~g~~p~~~----~~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~~li~~~l 253 (272)
T cd06629 189 YSAKVDIWSLGCVVLEMFAGRRPWSD----EEAIAAMFKL-GNKRSAPPIPPDV----------SMNLSPVALDFLNACF 253 (272)
T ss_pred CCccchhHHHHHHHHHHHhCCCCCcC----cchHHHHHHh-hccccCCcCCccc----------cccCCHHHHHHHHHHh
Confidence 56789999999999999999999642 1122222221 1111111111111 0012234667788999
Q ss_pred CCCccCchhHHHHHH
Q 011044 466 VESPIRESTQRKLLQ 480 (495)
Q Consensus 466 ~~~p~~Rp~m~~v~~ 480 (495)
..+|.+||+|.+|++
T Consensus 254 ~~~p~~Rps~~~il~ 268 (272)
T cd06629 254 TINPDNRPTARELLQ 268 (272)
T ss_pred cCChhhCCCHHHHhh
Confidence 999999999999875
No 196
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=97.19 E-value=0.00042 Score=69.34 Aligned_cols=83 Identities=22% Similarity=0.301 Sum_probs=59.9
Q ss_pred CCccccCCCcceeehhhhhhcccC-CCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTA-KKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tg-k~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.|+|||.|||+|-|+.|- ..|. -++++.+... .+... -++ .+.+.|...|.++
T Consensus 439 AyNtFSiKSDVWAFGVLLWEIATYGMsPY-----PGidlSqVY~-LLEkg------yRM--------~~PeGCPpkVYeL 498 (1157)
T KOG4278|consen 439 AYNTFSIKSDVWAFGVLLWEIATYGMSPY-----PGIDLSQVYG-LLEKG------YRM--------DGPEGCPPKVYEL 498 (1157)
T ss_pred cccccccchhhHHHHHHHHHHHhcCCCCC-----CCccHHHHHH-HHhcc------ccc--------cCCCCCCHHHHHH
Confidence 344678899999999999999874 4553 2566655322 22211 111 1345689999999
Q ss_pred HhhcCCCCccCchhHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQK 484 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~ 484 (495)
...|..=+|.+||++.|+-+.++.
T Consensus 499 MraCW~WsPsDRPsFaeiHqafEt 522 (1157)
T KOG4278|consen 499 MRACWNWSPSDRPSFAEIHQAFET 522 (1157)
T ss_pred HHHHhcCCcccCccHHHHHHHHHH
Confidence 999999999999999999877753
No 197
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=97.19 E-value=0.00033 Score=64.77 Aligned_cols=80 Identities=18% Similarity=0.265 Sum_probs=49.9
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|||+||+++.|+++|+.|.+.. +...............+.+. ......+.++..
T Consensus 171 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~i~ 232 (253)
T cd05122 171 GKPYDYKADIWSLGITAIELAEGKPPYSEL-----PPMKALFKIATNGPPGLRNP-------------EKWSDEFKDFLK 232 (253)
T ss_pred CCCCCccccHHHHHHHHHHHHhCCCCCCCC-----chHHHHHHHHhcCCCCcCcc-------------cccCHHHHHHHH
Confidence 344678899999999999999999986431 11122211111111111000 001233677888
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||++.|+++
T Consensus 233 ~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 233 KCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HHccCChhhCCCHHHHhc
Confidence 999999999999999864
No 198
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=97.18 E-value=0.00035 Score=66.54 Aligned_cols=78 Identities=14% Similarity=0.187 Sum_probs=49.4
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
..+.++|+|||||++.|+++|+.|...... ...+.++. ......+.++ +.....+..+...|
T Consensus 209 ~~~~~~Di~slGvi~~el~~g~~p~~~~~~-~~~~~~~~----~~~~~~~~~~-------------~~~~~~l~~li~~~ 270 (291)
T cd06639 209 SYDARCDVWSLGITAIELGDGDPPLFDMHP-VKTLFKIP----RNPPPTLLHP-------------EKWCRSFNHFISQC 270 (291)
T ss_pred ccCCccchHHHHHHHHHHhhCCCCCCCCcH-HHHHHHHh----cCCCCCCCcc-------------cccCHHHHHHHHHH
Confidence 356789999999999999999998643211 01111111 1111111111 11123477889999
Q ss_pred CCCCccCchhHHHHHH
Q 011044 465 TVESPIRESTQRKLLQ 480 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~~ 480 (495)
.+.+|.+||+|.|+++
T Consensus 271 l~~~p~~Rps~~~il~ 286 (291)
T cd06639 271 LIKDFEARPSVTHLLE 286 (291)
T ss_pred hhcChhhCcCHHHHhc
Confidence 9999999999999864
No 199
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=97.18 E-value=0.00041 Score=65.76 Aligned_cols=78 Identities=17% Similarity=0.229 Sum_probs=48.5
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
..+.++|||||||++.|+++|+.|.... +-.+-+..........+..+. .....+.++...|
T Consensus 184 ~~~~~~Dv~slGvil~el~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~li~~~ 245 (282)
T cd06643 184 PYDYKADVWSLGITLIEMAQIEPPHHEL-----NPMRVLLKIAKSEPPTLAQPS-------------RWSSEFKDFLKKC 245 (282)
T ss_pred CCCccchhhhHHHHHHHHccCCCCcccc-----CHHHHHHHHhhcCCCCCCCcc-------------ccCHHHHHHHHHH
Confidence 3567899999999999999999885421 111111111111100110110 1123467788999
Q ss_pred CCCCccCchhHHHHHH
Q 011044 465 TVESPIRESTQRKLLQ 480 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~~ 480 (495)
...+|.+||++.++++
T Consensus 246 l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 246 LEKNVDARWTTTQLLQ 261 (282)
T ss_pred ccCChhhCcCHHHHhc
Confidence 9999999999999853
No 200
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=97.18 E-value=4.4e-05 Score=78.49 Aligned_cols=237 Identities=22% Similarity=0.134 Sum_probs=123.9
Q ss_pred CCCCCcEEEccCCcccccCC-hhHhhcCCCCCEEEcccc-cCCccC----CcccCCCCCCCEEEcccCc-CccccCcccc
Q 011044 101 NMSSLLSIYFNNNTLFGELP-PNFCNQMSNLESLFLKYN-MFHGKI----PSTLSSCKQLRELSLSSNY-FSGTIPKEIG 173 (495)
Q Consensus 101 ~l~~L~~L~l~~n~~~~~~p-~~~~~~l~~L~~L~l~~n-~l~~~~----~~~l~~l~~L~~L~l~~n~-l~~~~~~~l~ 173 (495)
.++.|+.+.+.++.-..... ..+...+++|+.|+++++ ...... ......+++|+.|+++.+. ++...-..+.
T Consensus 186 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~ 265 (482)
T KOG1947|consen 186 SCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALA 265 (482)
T ss_pred hCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHH
Confidence 36777777777764333321 233444788888888763 211111 1233456788888888776 5433333333
Q ss_pred C-CCCCCEEEccCCC-CCCCCCh-hhhCcccccEEEecCCcCCCc--CchhhhcCCCCceeeCCCCcCCCCCCccccccc
Q 011044 174 N-LTKLTRLNLRQNK-LQGEIPE-ELGNLAELEMLWLQNNSLTGT--IPSSIFSLSSLLNLDLSLNNFTGIIPSSIGNLS 248 (495)
Q Consensus 174 ~-l~~L~~L~L~~n~-l~~~~~~-~l~~l~~L~~L~l~~n~l~~~--~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~ 248 (495)
. +++|++|.+.++. ++...-. ....++.|++|++++|..... +.....++++|+.+.+.... .+.
T Consensus 266 ~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~----------~c~ 335 (482)
T KOG1947|consen 266 SRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLN----------GCP 335 (482)
T ss_pred hhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcC----------CCc
Confidence 3 7788888877776 4433222 234677888888887765311 22334456677665543321 144
Q ss_pred ccceeeccCccccc--ccchhhhhCCccccccccccceeeecc-cccccCCCCCCeeecccccccccCCccccCCCcCCE
Q 011044 249 SLQKLYLSDNQLSG--ELPANIGNNLPSLQTLSLYVNDFSGAI-PKEIGNLTKLTDLYLDQNKLQGKIPHEIGNLRKLEW 325 (495)
Q Consensus 249 ~L~~L~l~~n~l~~--~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~ 325 (495)
.++.+.+.+..-.. .........+++++.+.+..+...... ...+.+++.|. ..+.. .......++.
T Consensus 336 ~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l~-~~l~~---------~~~~~~~l~~ 405 (482)
T KOG1947|consen 336 SLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNLT-ESLEL---------RLCRSDSLRV 405 (482)
T ss_pred cHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCcccc-hHHHH---------HhccCCccce
Confidence 55555554432211 233334446778888888777643222 23345555552 21111 1112222777
Q ss_pred EeCcCCcccc-cCCcCccC-CCCCcEEEccCCcC
Q 011044 326 LMLSHNKLVG-VVPAPIFN-LSTLISLQLHNNSL 357 (495)
Q Consensus 326 L~l~~n~l~~-~~~~~~~~-l~~L~~L~l~~n~l 357 (495)
|+++.+.... ........ +..+..+++.++..
T Consensus 406 L~l~~~~~~t~~~l~~~~~~~~~~~~l~~~~~~~ 439 (482)
T KOG1947|consen 406 LNLSDCRLVTDKGLRCLADSCSNLKDLDLSGCRV 439 (482)
T ss_pred EecccCccccccchHHHhhhhhccccCCccCccc
Confidence 7777775332 11111111 45566666666543
No 201
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.16 E-value=0.00019 Score=64.41 Aligned_cols=107 Identities=27% Similarity=0.300 Sum_probs=63.2
Q ss_pred CCccccccccccceeeecccccccCCCCCCeeecccc--cccccCCccccCCCcCCEEeCcCCcccc-cCCcCccCCCCC
Q 011044 271 NLPSLQTLSLYVNDFSGAIPKEIGNLTKLTDLYLDQN--KLQGKIPHEIGNLRKLEWLMLSHNKLVG-VVPAPIFNLSTL 347 (495)
Q Consensus 271 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n--~i~~~~~~~l~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L 347 (495)
.+..|+.|++.+..++.. ..+..+++|+.|.++.| ++.+..+.....+++|+++++++|+++. .....+..+.+|
T Consensus 41 ~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL 118 (260)
T KOG2739|consen 41 EFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENL 118 (260)
T ss_pred cccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcch
Confidence 344556666655555421 23555677777777777 5554444444566788888888887763 122344566777
Q ss_pred cEEEccCCcCceecCC---CCCCCCCChhhhhhhhc
Q 011044 348 ISLQLHNNSLSGSLPS---SADVPLPNLEELFLWEY 380 (495)
Q Consensus 348 ~~L~l~~n~l~~~~~~---~~~~~l~~L~~L~l~~~ 380 (495)
..|++.+|..+. .-. ..+..+|+|.+|+-...
T Consensus 119 ~~Ldl~n~~~~~-l~dyre~vf~ll~~L~~LD~~dv 153 (260)
T KOG2739|consen 119 KSLDLFNCSVTN-LDDYREKVFLLLPSLKYLDGCDV 153 (260)
T ss_pred hhhhcccCCccc-cccHHHHHHHHhhhhcccccccc
Confidence 788888887663 111 12334677777664433
No 202
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=97.16 E-value=0.00031 Score=68.42 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=26.0
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCc
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
|.......+.++|+||||+++.|++||+.|..
T Consensus 172 E~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 203 (331)
T cd06649 172 ERLQGTHYSVQSDIWSMGLSLVELAIGRYPIP 203 (331)
T ss_pred hHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 33334456778999999999999999999964
No 203
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=97.16 E-value=0.00029 Score=68.46 Aligned_cols=26 Identities=27% Similarity=0.456 Sum_probs=23.2
Q ss_pred ccCCCcceeehhhhhhcccCCCCCcc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDE 411 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~ 411 (495)
.+.++|||||||++.|++||+.|.+.
T Consensus 187 ~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 187 YDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred CCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 56789999999999999999999753
No 204
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=97.15 E-value=0.00031 Score=65.69 Aligned_cols=76 Identities=17% Similarity=0.214 Sum_probs=48.0
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
.+.++|+||||+++.|+++|..+... ..+-...... .... ..+- ......+.++...|.
T Consensus 182 ~~~~~DiwslG~~l~~l~~g~~~~~~----~~~~~~~~~~-~~~~------~~~~----------~~~~~~~~~li~~~l 240 (258)
T cd05078 182 LSLAADKWSFGTTLWEIFSGGDKPLS----ALDSQKKLQF-YEDR------HQLP----------APKWTELANLINQCM 240 (258)
T ss_pred CCchhhHHHHHHHHHHHHcCCCCChh----hccHHHHHHH-HHcc------ccCC----------CCCcHHHHHHHHHHh
Confidence 56789999999999999999644211 1111111110 1100 0000 011234678899999
Q ss_pred CCCccCchhHHHHHHHH
Q 011044 466 VESPIRESTQRKLLQDS 482 (495)
Q Consensus 466 ~~~p~~Rp~m~~v~~~l 482 (495)
+.+|.+||++++++++|
T Consensus 241 ~~~p~~Rps~~~il~~l 257 (258)
T cd05078 241 DYEPDFRPSFRAIIRDL 257 (258)
T ss_pred ccChhhCCCHHHHHHhc
Confidence 99999999999999876
No 205
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=97.15 E-value=0.00025 Score=66.97 Aligned_cols=77 Identities=22% Similarity=0.351 Sum_probs=49.4
Q ss_pred ccccCCCcceeehhhhhhc-ccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 384 GRVSTNGDIYNFGIMIMET-FTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~-~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
...+.++||||||+++.|+ ++|+.|....-. .....+...... +.. .....+.++..
T Consensus 196 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~----------~~~----------~~~~~~~~li~ 253 (274)
T cd05076 196 NSLSTAADKWSFGTTLLEICFDGEVPLKERTP--SEKERFYEKKHR----------LPE----------PSCKELATLIS 253 (274)
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCCccccCh--HHHHHHHHhccC----------CCC----------CCChHHHHHHH
Confidence 3457789999999999998 578887543211 111122111000 000 00123678889
Q ss_pred hcCCCCccCchhHHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~l 482 (495)
.|.+.+|.+||+|.++++.|
T Consensus 254 ~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 254 QCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHcccChhhCcCHHHHHHhh
Confidence 99999999999999998876
No 206
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=97.14 E-value=0.00035 Score=66.79 Aligned_cols=79 Identities=18% Similarity=0.221 Sum_probs=50.2
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
..+.++|+||||+++.|+++|+.|..... .-.+..+.........+-+ ...+...+.++...|
T Consensus 194 ~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~li~~~ 256 (296)
T cd06618 194 KYDIRADVWSLGISLVELATGQFPYKNCK----TEFEVLTKILQEEPPSLPP-------------NEGFSPDFCSFVDLC 256 (296)
T ss_pred ccccchhHHHHHHHHHHHHhCCCCCCcch----hHHHHHHHHhcCCCCCCCC-------------CCCCCHHHHHHHHHH
Confidence 36678999999999999999999964311 1112222222111100000 001233477788999
Q ss_pred CCCCccCchhHHHHHH
Q 011044 465 TVESPIRESTQRKLLQ 480 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~~ 480 (495)
...+|.+||++.++++
T Consensus 257 l~~~p~~Rp~~~~il~ 272 (296)
T cd06618 257 LTKDHRKRPKYRELLQ 272 (296)
T ss_pred ccCChhhCCCHHHHhc
Confidence 9999999999999964
No 207
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=97.13 E-value=0.00051 Score=63.96 Aligned_cols=79 Identities=18% Similarity=0.216 Sum_probs=51.6
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++||||||+++.|+++|+.|.+. .+....+........... . ......+.++..
T Consensus 175 ~~~~~~~~Dv~slG~i~~~l~~g~~~~~~-----~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~~~~i~ 234 (256)
T cd08221 175 GVKYNFKSDIWALGCVLYELLTLKRTFDA-----TNPLNLVVKIVQGNYTPV-V--------------SVYSSELISLVH 234 (256)
T ss_pred CCCCCCcchhHHHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHcCCCCCC-c--------------cccCHHHHHHHH
Confidence 33456789999999999999999988542 223333433332221110 0 011233667788
Q ss_pred hcCCCCccCchhHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQD 481 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~ 481 (495)
.|...+|.+||++.++++.
T Consensus 235 ~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 235 SLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HHcccCcccCCCHHHHhhC
Confidence 8999999999999999764
No 208
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=97.13 E-value=0.00043 Score=65.09 Aligned_cols=78 Identities=15% Similarity=0.255 Sum_probs=49.0
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
..+.++|||+||+++.|++||+.|..... .... +..........+.. .......+.++...|
T Consensus 194 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~-~~~~~~~~~~~~~~-------------~~~~~~~~~~li~~~ 255 (275)
T cd06608 194 SYDARSDVWSLGITAIELADGKPPLCDMH----PMRA-LFKIPRNPPPTLKS-------------PENWSKKFNDFISEC 255 (275)
T ss_pred CccccccHHHhHHHHHHHHhCCCCccccc----hHHH-HHHhhccCCCCCCc-------------hhhcCHHHHHHHHHH
Confidence 45678999999999999999999964321 1111 11111111001100 011223466788899
Q ss_pred CCCCccCchhHHHHHH
Q 011044 465 TVESPIRESTQRKLLQ 480 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~~ 480 (495)
...+|.+||++.|+++
T Consensus 256 l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 256 LIKNYEQRPFMEELLE 271 (275)
T ss_pred hhcChhhCcCHHHHhc
Confidence 9999999999999875
No 209
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.12 E-value=0.00029 Score=63.27 Aligned_cols=90 Identities=17% Similarity=0.129 Sum_probs=46.0
Q ss_pred hhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCC--cccccCChhHhhcCCCCCEEEcccccCCc-cCCcccC
Q 011044 73 SELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNN--TLFGELPPNFCNQMSNLESLFLKYNMFHG-KIPSTLS 149 (495)
Q Consensus 73 ~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n--~~~~~~p~~~~~~l~~L~~L~l~~n~l~~-~~~~~l~ 149 (495)
.....+..|+.|++.+..++.. ..+..+++|++|.++.| .+.+.++.-... +++|++|++++|++.. .....+.
T Consensus 37 gl~d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~-~P~l~~l~ls~Nki~~lstl~pl~ 113 (260)
T KOG2739|consen 37 GLTDEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEK-APNLKVLNLSGNKIKDLSTLRPLK 113 (260)
T ss_pred cccccccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhh-CCceeEEeecCCccccccccchhh
Confidence 3334455566666655555411 23445666777777777 444444333333 5666666666666552 1111233
Q ss_pred CCCCCCEEEcccCcCc
Q 011044 150 SCKQLRELSLSSNYFS 165 (495)
Q Consensus 150 ~l~~L~~L~l~~n~l~ 165 (495)
.+.+|..|++.+|..+
T Consensus 114 ~l~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 114 ELENLKSLDLFNCSVT 129 (260)
T ss_pred hhcchhhhhcccCCcc
Confidence 4455555555555444
No 210
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=97.11 E-value=0.00049 Score=63.12 Aligned_cols=81 Identities=16% Similarity=0.125 Sum_probs=52.7
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+|+||+++.|+++|+.|.+.. .+...+.+......... ... .......+.++..
T Consensus 160 ~~~~~~~~Di~slG~~l~~l~~~~~p~~~~----~~~~~~~~~~~~~~~~~-~~~------------~~~~~~~~~~~i~ 222 (244)
T smart00220 160 GKGYGKAVDVWSLGVILYELLTGKPPFPGD----DQLLELFKKIGKPKPPF-PPP------------EWKISPEAKDLIR 222 (244)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCCCCC----CcHHHHHHHHhccCCCC-ccc------------cccCCHHHHHHHH
Confidence 445677899999999999999999886432 12223333222111100 000 0002345788999
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||++.++++
T Consensus 223 ~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 223 KLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHccCCchhccCHHHHhh
Confidence 999999999999999975
No 211
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=97.11 E-value=0.00051 Score=65.28 Aligned_cols=79 Identities=22% Similarity=0.304 Sum_probs=50.0
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++|+|+||+++.|++||+.|... ..+. ..+............++ ......+.++...
T Consensus 191 ~~~~~~~Dv~slGvil~~l~~g~~p~~~----~~~~-~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~~ 252 (286)
T cd06614 191 KDYGPKVDIWSLGIMCIEMAEGEPPYLR----EPPL-RALFLITTKGIPPLKNP-------------EKWSPEFKDFLNK 252 (286)
T ss_pred CCCCCccccHHHHHHHHHHHhCCCCCCC----CCHH-HHHHHHHhcCCCCCcch-------------hhCCHHHHHHHHH
Confidence 3457789999999999999999998532 1111 11111111111111010 0122347788999
Q ss_pred cCCCCccCchhHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQ 480 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~ 480 (495)
|.+.+|.+||++.++++
T Consensus 253 ~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 253 CLVKDPEKRPSAEELLQ 269 (286)
T ss_pred HhccChhhCcCHHHHhh
Confidence 99999999999999965
No 212
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=97.11 E-value=0.00041 Score=65.28 Aligned_cols=87 Identities=14% Similarity=0.171 Sum_probs=51.9
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVF 458 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~ 458 (495)
|--.+...+.++||||||+.++|+.+|+-|.-....+.++....+.....+. -|++-.. .+-.+..
T Consensus 247 ERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~p-----pP~lP~~---------~fS~ef~ 312 (364)
T KOG0581|consen 247 ERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEP-----PPRLPEG---------EFSPEFR 312 (364)
T ss_pred hhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCC-----CCCCCcc---------cCCHHHH
Confidence 4444556677899999999999999999986543222222222111111111 0111100 1122244
Q ss_pred HHHhhcCCCCccCchhHHHHH
Q 011044 459 NLAMECTVESPIRESTQRKLL 479 (495)
Q Consensus 459 ~~~~~C~~~~p~~Rp~m~~v~ 479 (495)
...-.|...+|.+||+..|.+
T Consensus 313 ~FV~~CL~Kdp~~R~s~~qLl 333 (364)
T KOG0581|consen 313 SFVSCCLRKDPSERPSAKQLL 333 (364)
T ss_pred HHHHHHhcCCcccCCCHHHHh
Confidence 556789999999999999984
No 213
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=97.09 E-value=0.00037 Score=66.27 Aligned_cols=81 Identities=15% Similarity=0.238 Sum_probs=50.5
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
..+.++||||||+++.|+++|+.|.... .....-+....... .+.+.... .......+.++...|
T Consensus 186 ~~~~~~Di~slG~il~el~~g~~p~~~~----~~~~~~~~~~~~~~-----~~~~~~~~------~~~~~~~l~~li~~~ 250 (288)
T cd06616 186 GYDVRSDVWSLGITLYEVATGKFPYPKW----NSVFDQLTQVVKGD-----PPILSNSE------EREFSPSFVNFINLC 250 (288)
T ss_pred CCcchhhhhHHHHHHHHHHhCCCCchhc----chHHHHHhhhcCCC-----CCcCCCcC------CCccCHHHHHHHHHH
Confidence 4667899999999999999999995431 11111111111111 01111100 011233477888999
Q ss_pred CCCCccCchhHHHHHH
Q 011044 465 TVESPIRESTQRKLLQ 480 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~~ 480 (495)
...+|.+||++.+|++
T Consensus 251 l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 251 LIKDESKRPKYKELLE 266 (288)
T ss_pred ccCChhhCcCHHHHhc
Confidence 9999999999999964
No 214
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=97.09 E-value=0.00054 Score=64.84 Aligned_cols=79 Identities=20% Similarity=0.307 Sum_probs=49.0
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++|+||||+++.|+++|+.|.... +..+.+..........+..+. .....+.++...
T Consensus 183 ~~~~~~sDi~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~li~~ 244 (280)
T cd06611 183 NPYDYKADIWSLGITLIELAQMEPPHHEL-----NPMRVLLKILKSEPPTLDQPS-------------KWSSSFNDFLKS 244 (280)
T ss_pred CCCCccccHHHHHHHHHHHHhCCCCcccC-----CHHHHHHHHhcCCCCCcCCcc-------------cCCHHHHHHHHH
Confidence 34567899999999999999999996432 111222211111100000000 112235667788
Q ss_pred cCCCCccCchhHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQ 480 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~ 480 (495)
|...+|.+||++.+|++
T Consensus 245 ~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 245 CLVKDPDDRPTAAELLK 261 (280)
T ss_pred HhccChhhCcCHHHHhc
Confidence 99999999999999964
No 215
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=97.08 E-value=0.00033 Score=66.46 Aligned_cols=92 Identities=18% Similarity=0.244 Sum_probs=50.2
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHH--h---CCCcceeeecc------ccccccccc---cch
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDL--L---SISVMEVVDAN------LLSWKDKHF---MTK 450 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~--~---~~~~~~v~d~~------l~~~~~~~~---~~~ 450 (495)
..+.++||||||+++.|++||+.|.. ++.....+.+.. . ........+.. ......... ...
T Consensus 177 ~~~~~~Dv~slG~~l~el~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (286)
T cd07846 177 KYGRAVDIWAVGCLVTEMLTGEPLFP----GDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRF 252 (286)
T ss_pred ccCchHhHHHHHHHHHHHHcCCCCCC----CCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhC
Confidence 35678999999999999999987753 222222221111 0 00000000000 000000000 000
Q ss_pred hhHHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 451 EQCMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 451 ~~~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
......+.++...|...+|.+||+|.++++
T Consensus 253 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 253 PKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred CCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 122345788999999999999999999864
No 216
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=97.08 E-value=0.00042 Score=68.20 Aligned_cols=77 Identities=18% Similarity=0.313 Sum_probs=47.4
Q ss_pred cCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcCC
Q 011044 387 STNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECTV 466 (495)
Q Consensus 387 ~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~ 466 (495)
+.++|||||||++.|+++|+.|....-. ..|........... .+.. ...+-..+.++...|..
T Consensus 251 ~~~~DvwslGvil~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~--~~~~----------~~~~~~~l~~li~~~l~ 313 (353)
T PLN00034 251 GYAGDIWSLGVSILEFYLGRFPFGVGRQ-----GDWASLMCAICMSQ--PPEA----------PATASREFRHFISCCLQ 313 (353)
T ss_pred CcchhHHHHHHHHHHHHhCCCCCCCCCC-----ccHHHHHHHHhccC--CCCC----------CCccCHHHHHHHHHHcc
Confidence 4579999999999999999999652111 12222111100000 0000 00112236677889999
Q ss_pred CCccCchhHHHHHH
Q 011044 467 ESPIRESTQRKLLQ 480 (495)
Q Consensus 467 ~~p~~Rp~m~~v~~ 480 (495)
.+|.+||++.|+++
T Consensus 314 ~~P~~Rpt~~ell~ 327 (353)
T PLN00034 314 REPAKRWSAMQLLQ 327 (353)
T ss_pred CChhhCcCHHHHhc
Confidence 99999999999965
No 217
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=97.08 E-value=0.00044 Score=66.16 Aligned_cols=80 Identities=20% Similarity=0.275 Sum_probs=49.3
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|||||||++.|++||+.|.+. .... ..+.............+ ......+.++..
T Consensus 189 ~~~~~~~~Dv~slGvil~~lltg~~pf~~----~~~~-~~~~~~~~~~~~~~~~~-------------~~~~~~~~~li~ 250 (296)
T cd06655 189 RKAYGPKVDIWSLGIMAIEMVEGEPPYLN----ENPL-RALYLIATNGTPELQNP-------------EKLSPIFRDFLN 250 (296)
T ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCC----CCHH-HHHHHHHhcCCcccCCc-------------ccCCHHHHHHHH
Confidence 34467789999999999999999999643 1111 11111111110000000 011223667788
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||++.+++.
T Consensus 251 ~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 251 RCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHhhcChhhCCCHHHHhh
Confidence 999999999999999953
No 218
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=97.07 E-value=0.00072 Score=68.71 Aligned_cols=85 Identities=20% Similarity=0.344 Sum_probs=60.4
Q ss_pred hhcCCCccccCCCcceeehhhhhhcccC-CCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHH
Q 011044 378 WEYGREGRVSTNGDIYNFGIMIMETFTA-KKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSF 456 (495)
Q Consensus 378 ~~~~~~~~~~~~~dvysfgilllE~~tg-k~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~ 456 (495)
.|+...++.+.++|||.|||-+-||||+ ..|+-..- +.. +++-+|..- .-..-+.|...
T Consensus 284 PEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~--g~q------------IL~~iD~~e------rLpRPk~csed 343 (1039)
T KOG0199|consen 284 PESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR--GIQ------------ILKNIDAGE------RLPRPKYCSED 343 (1039)
T ss_pred HhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC--HHH------------HHHhccccc------cCCCCCCChHH
Confidence 4666788899999999999999999985 55653211 111 222223110 00123468889
Q ss_pred HHHHHhhcCCCCccCchhHHHHHHHH
Q 011044 457 VFNLAMECTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 457 ~~~~~~~C~~~~p~~Rp~m~~v~~~l 482 (495)
+.+++..|.+..|.+||++.++++.+
T Consensus 344 IY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 344 IYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHHHHHhccCCccccccHHHHHHhH
Confidence 99999999999999999999998655
No 219
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=97.07 E-value=0.00054 Score=65.16 Aligned_cols=80 Identities=19% Similarity=0.215 Sum_probs=51.2
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++||||||+++.|+++|+.|... . +-..+++....... +.+.. .......+.++..
T Consensus 189 ~~~~~~~~Dv~slGv~l~ell~g~~p~~~----~-~~~~~~~~~~~~~~-----~~~~~--------~~~~~~~l~~li~ 250 (285)
T cd06648 189 RLPYGTEVDIWSLGIMVIEMVDGEPPYFN----E-PPLQAMKRIRDNLP-----PKLKN--------LHKVSPRLRSFLD 250 (285)
T ss_pred CCCCCCcccHHHHHHHHHHHHhCCCCCcC----C-CHHHHHHHHHhcCC-----CCCcc--------cccCCHHHHHHHH
Confidence 34456789999999999999999998542 1 11233332222110 01100 0011234778899
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||++.++++
T Consensus 251 ~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 251 RMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHcccChhhCcCHHHHcc
Confidence 999999999999999864
No 220
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=97.07 E-value=0.00049 Score=64.02 Aligned_cols=81 Identities=22% Similarity=0.466 Sum_probs=52.8
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
.....+.++|+|++|+++.|+++ |+.|.+. .+.....+.......... .......+.++
T Consensus 177 ~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~-----~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 236 (258)
T smart00219 177 KDGKFTSKSDVWSFGVLLWEIFTLGESPYPG-----MSNEEVLEYLKKGYRLPK---------------PENCPPEIYKL 236 (258)
T ss_pred ccCCCCcchhHHHHHHHHHHHHhCCCCCCCC-----CCHHHHHHHHhcCCCCCC---------------CCcCCHHHHHH
Confidence 34556788999999999999998 5666432 233333332222111100 00123347788
Q ss_pred HhhcCCCCccCchhHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l 482 (495)
...|...+|.+||++.|+++.|
T Consensus 237 i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 237 MLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHCcCChhhCcCHHHHHhhC
Confidence 9999999999999999998753
No 221
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=97.06 E-value=0.00029 Score=66.95 Aligned_cols=94 Identities=14% Similarity=0.125 Sum_probs=50.6
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHh---CCCccee--eeccccc-----cccccc---cchh
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLL---SISVMEV--VDANLLS-----WKDKHF---MTKE 451 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~---~~~~~~v--~d~~l~~-----~~~~~~---~~~~ 451 (495)
..+.++||||||+++.|+++|+.|....- ..+......... +...... .++.... ...... ....
T Consensus 178 ~~~~~~Dv~slG~~l~~l~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (288)
T cd07833 178 NYGKPVDVWAIGCIMAELLDGEPLFPGDS--DIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPG 255 (288)
T ss_pred CcCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCC
Confidence 45678999999999999999998864311 111111111111 0000000 0110000 000000 0000
Q ss_pred hHHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 452 QCMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 452 ~~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
.....+.++...|...+|.+||++.++++
T Consensus 256 ~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 256 KVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 12455888999999999999999999864
No 222
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=97.05 E-value=0.00018 Score=70.12 Aligned_cols=95 Identities=15% Similarity=0.136 Sum_probs=50.1
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCc----ceeeecc-------ccccccc-cccchh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISV----MEVVDAN-------LLSWKDK-HFMTKE 451 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~----~~v~d~~-------l~~~~~~-~~~~~~ 451 (495)
...+.++|||||||++.|++||+.|.... .......++........ ..+.... +...... ......
T Consensus 183 ~~~~~~~DvwSlGvvl~el~tg~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (338)
T cd07859 183 SKYTPAIDIWSIGCIFAEVLTGKPLFPGK--NVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFP 260 (338)
T ss_pred cccCchhHHHHHHHHHHHHHcCCCCCCCC--ChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcC
Confidence 34567899999999999999999885321 01111111111111100 0000000 0000000 000000
Q ss_pred hHHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 452 QCMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 452 ~~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
.....+.++...|...+|.+||++.|+++
T Consensus 261 ~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 261 NADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred CCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 11234678899999999999999999964
No 223
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=97.05 E-value=0.00058 Score=64.40 Aligned_cols=82 Identities=23% Similarity=0.376 Sum_probs=52.6
Q ss_pred CccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.+..+.++||||||+++.|+++ |..|... ..-...+........... ....+...+.++.
T Consensus 192 ~~~~~~~~Di~slG~~l~~l~~~~~~p~~~-----~~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~~i 252 (275)
T cd05046 192 EDDFSTKSDVWSFGVLMWEVFTQGELPFYG-----LSDEEVLNRLQAGKLELP--------------VPEGCPSRLYKLM 252 (275)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCCccc-----cchHHHHHHHHcCCcCCC--------------CCCCCCHHHHHHH
Confidence 3445678999999999999998 5666422 111222222111111000 0012234588899
Q ss_pred hhcCCCCccCchhHHHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
..|...+|.+||++.|++..|.
T Consensus 253 ~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 253 TRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHcCCCcccCCCHHHHHHHhc
Confidence 9999999999999999988875
No 224
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=97.03 E-value=0.00053 Score=64.48 Aligned_cols=83 Identities=13% Similarity=0.224 Sum_probs=46.0
Q ss_pred ccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 384 GRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
...+.++||||||+++.|+++ |+.|....- +. .-...........+.++.+.. .....+.++..
T Consensus 184 ~~~~~~~DiwslG~~l~el~~~~~~p~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 248 (269)
T cd05042 184 KDQTKKSNIWSLGVTMWELFTAADQPYPDLS----DE-QVLKQVVREQDIKLPKPQLDL----------KYSDRWYEVMQ 248 (269)
T ss_pred cccchhhHHHHHHHHHHHHHhCCCCCCCcCC----HH-HHHHHHhhccCccCCCCcccc----------cCCHHHHHHHH
Confidence 345778999999999999999 666653211 11 111111111111111221110 11122334455
Q ss_pred hcCCCCccCchhHHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~l 482 (495)
.|. .+|.+||++.+|++.|
T Consensus 249 ~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 249 FCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred HHh-cCcccccCHHHHHHHh
Confidence 565 4999999999998876
No 225
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=97.02 E-value=0.00052 Score=64.31 Aligned_cols=79 Identities=15% Similarity=0.208 Sum_probs=48.8
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++|||+||+++.|++||+.|....- .............. .+.+. ......+..+...
T Consensus 183 ~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~----~~~~~~~~~~~~~~----~~~~~----------~~~~~~~~~~i~~ 244 (265)
T cd06631 183 SGYGRKSDIWSIGCTVFEMATGKPPLASMD----RLAAMFYIGAHRGL----MPRLP----------DSFSAAAIDFVTS 244 (265)
T ss_pred CCCcchhhHHHHHHHHHHHHhCCCccccCC----hHHHHHHhhhccCC----CCCCC----------CCCCHHHHHHHHH
Confidence 345678999999999999999999964321 11111100000000 01110 0122336778899
Q ss_pred cCCCCccCchhHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQ 480 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~ 480 (495)
|...+|.+||++.+++.
T Consensus 245 ~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 245 CLTRDQHERPSALQLLR 261 (265)
T ss_pred HhcCCcccCCCHHHHhc
Confidence 99999999999999864
No 226
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=97.02 E-value=0.00062 Score=65.83 Aligned_cols=79 Identities=19% Similarity=0.294 Sum_probs=49.8
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
+..+.++||||||+++.|+++|+.|....-. ...+..+.+...+ .. ........+.++...
T Consensus 199 ~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-~~~~~~~~~~~~~---------~~---------~~~~~~~~l~~li~~ 259 (317)
T cd06635 199 GQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESP---------TL---------QSNEWSDYFRNFVDS 259 (317)
T ss_pred CCCCccccHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHhccCC---------CC---------CCccccHHHHHHHHH
Confidence 4567789999999999999999998532110 0111111111100 00 000112336678889
Q ss_pred cCCCCccCchhHHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQD 481 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~~ 481 (495)
|...+|.+||++.++++.
T Consensus 260 ~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 260 CLQKIPQDRPTSEELLKH 277 (317)
T ss_pred HccCCcccCcCHHHHHhC
Confidence 999999999999999764
No 227
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=97.02 E-value=0.00071 Score=63.19 Aligned_cols=80 Identities=21% Similarity=0.337 Sum_probs=49.6
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
..+.++|+||||+++.||+||+.|..... ....-.. ... .+...+.+. ........+.++...|
T Consensus 180 ~~~~~~Di~slG~~l~~~~tg~~p~~~~~----~~~~~~~-~~~---~~~~~~~~~--------~~~~~~~~~~~li~~~ 243 (262)
T cd06613 180 GYDGKCDIWALGITAIELAELQPPMFDLH----PMRALFL-ISK---SNFPPPKLK--------DKEKWSPVFHDFIKKC 243 (262)
T ss_pred CcCchhhhHHHHHHHHHHHhCCCCCCCCC----HHHHHHH-HHh---ccCCCcccc--------chhhhhHHHHHHHHHH
Confidence 56678999999999999999999965321 1111000 000 000001110 0111234477899999
Q ss_pred CCCCccCchhHHHHHH
Q 011044 465 TVESPIRESTQRKLLQ 480 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~~ 480 (495)
...+|.+||++.+|+.
T Consensus 244 l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 244 LTKDPKKRPTATKLLQ 259 (262)
T ss_pred cCCChhhCCCHHHHhc
Confidence 9999999999999864
No 228
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=97.01 E-value=0.00074 Score=65.01 Aligned_cols=78 Identities=18% Similarity=0.262 Sum_probs=49.0
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
+..+.++||||||+++.|+++|+.|.... .-..++........ +... .......+..+...
T Consensus 189 ~~~~~~~Di~slG~il~el~~g~~p~~~~-----~~~~~~~~~~~~~~-----~~~~---------~~~~~~~~~~li~~ 249 (308)
T cd06634 189 GQYDGKVDVWSLGITCIELAERKPPLFNM-----NAMSALYHIAQNES-----PALQ---------SGHWSEYFRNFVDS 249 (308)
T ss_pred CCCCcccchHHHHHHHHHHHcCCCCCccc-----cHHHHHHHHhhcCC-----CCcC---------cccccHHHHHHHHH
Confidence 34667899999999999999999985331 11111111111110 0000 00122336678889
Q ss_pred cCCCCccCchhHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQ 480 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~ 480 (495)
|...+|.+||++.+|++
T Consensus 250 cl~~~P~~Rp~~~~ll~ 266 (308)
T cd06634 250 CLQKIPQDRPTSEVLLK 266 (308)
T ss_pred HhhCCcccCCCHHHHhh
Confidence 99999999999999864
No 229
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=97.01 E-value=0.00064 Score=64.29 Aligned_cols=78 Identities=17% Similarity=0.256 Sum_probs=50.7
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+||||+++.|++||+.|.... .-..++......... .+ .......+.++..
T Consensus 175 ~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~-----~~----------~~~~~~~~~~~i~ 234 (277)
T cd06641 175 QSAYDSKADIWSLGITAIELAKGEPPHSEL-----HPMKVLFLIPKNNPP-----TL----------EGNYSKPLKEFVE 234 (277)
T ss_pred cCCCCchhhHHHHHHHHHHHHcCCCCCCcc-----chHHHHHHHhcCCCC-----CC----------CcccCHHHHHHHH
Confidence 345667899999999999999999986432 111222221111110 01 0012233667889
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||+|.++++
T Consensus 235 ~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 235 ACLNKEPSFRPTAKELLK 252 (277)
T ss_pred HHccCChhhCcCHHHHHh
Confidence 999999999999999976
No 230
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=97.01 E-value=0.00018 Score=73.99 Aligned_cols=224 Identities=23% Similarity=0.129 Sum_probs=132.2
Q ss_pred cccccCChhHhhcCCCCCEEEcccccCCcc--CCcccCCCCCCCEEEcccC-cCcccc----CccccCCCCCCEEEccCC
Q 011044 114 TLFGELPPNFCNQMSNLESLFLKYNMFHGK--IPSTLSSCKQLRELSLSSN-YFSGTI----PKEIGNLTKLTRLNLRQN 186 (495)
Q Consensus 114 ~~~~~~p~~~~~~l~~L~~L~l~~n~l~~~--~~~~l~~l~~L~~L~l~~n-~l~~~~----~~~l~~l~~L~~L~L~~n 186 (495)
.....+...+...+++|+.|.+..+.-... .-.....+++|+.|+++++ ...... ......+.+|+.|+++.+
T Consensus 174 ~~~~~~~~~l~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~ 253 (482)
T KOG1947|consen 174 LLLDKILLRLLSSCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGC 253 (482)
T ss_pred cccHHHHHHHHhhCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhh
Confidence 333333344555579999999998853323 3345578899999999873 211111 122345688999999998
Q ss_pred C-CCCCCChhhh-CcccccEEEecCCc-CCCcC-chhhhcCCCCceeeCCCCcCCCC--CCcccccccccceeeccCccc
Q 011044 187 K-LQGEIPEELG-NLAELEMLWLQNNS-LTGTI-PSSIFSLSSLLNLDLSLNNFTGI--IPSSIGNLSSLQKLYLSDNQL 260 (495)
Q Consensus 187 ~-l~~~~~~~l~-~l~~L~~L~l~~n~-l~~~~-~~~l~~l~~L~~L~Ls~n~l~~~--~~~~l~~~~~L~~L~l~~n~l 260 (495)
. ++...-..+. .+++|+.|.+.++. ++... ......+++|++|+++++..... +......+++++.|.+....
T Consensus 254 ~~isd~~l~~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~- 332 (482)
T KOG1947|consen 254 GLVTDIGLSALASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLN- 332 (482)
T ss_pred hccCchhHHHHHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcC-
Confidence 8 5544444444 37899999988777 55332 23345688899999998865321 22223456666665543321
Q ss_pred ccccchhhhhCCcccccccccccee---eecccccccCCCCCCeeecccccccccC-CccccCCCcCCEEeCcCCccccc
Q 011044 261 SGELPANIGNNLPSLQTLSLYVNDF---SGAIPKEIGNLTKLTDLYLDQNKLQGKI-PHEIGNLRKLEWLMLSHNKLVGV 336 (495)
Q Consensus 261 ~~~~~~~~~~~l~~L~~L~L~~n~l---~~~~~~~l~~l~~L~~L~L~~n~i~~~~-~~~l~~l~~L~~L~l~~n~l~~~ 336 (495)
.++.++.+.+.+... ..........+++++.+.+.++...... ...+..++.|+ ..+..+
T Consensus 333 ----------~c~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l~-~~l~~~----- 396 (482)
T KOG1947|consen 333 ----------GCPSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNLT-ESLELR----- 396 (482)
T ss_pred ----------CCccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCcccc-hHHHHH-----
Confidence 134455555544322 1223345677889999999988744322 24455666663 222211
Q ss_pred CCcCccCCCCCcEEEccCCcCc
Q 011044 337 VPAPIFNLSTLISLQLHNNSLS 358 (495)
Q Consensus 337 ~~~~~~~l~~L~~L~l~~n~l~ 358 (495)
......++.|+++.+...
T Consensus 397 ----~~~~~~l~~L~l~~~~~~ 414 (482)
T KOG1947|consen 397 ----LCRSDSLRVLNLSDCRLV 414 (482)
T ss_pred ----hccCCccceEecccCccc
Confidence 112222888888888643
No 231
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=97.00 E-value=0.00067 Score=64.94 Aligned_cols=80 Identities=16% Similarity=0.233 Sum_probs=48.8
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++||||||+++.|+++|+.|.... ........++ ..... .... .......+.++..
T Consensus 191 ~~~~~~~~Dv~slG~il~el~~g~~p~~~~--~~~~~~~~~~---~~~~~-----~~~~--------~~~~~~~l~~~i~ 252 (297)
T cd06659 191 RTPYGTEVDIWSLGIMVIEMVDGEPPYFSD--SPVQAMKRLR---DSPPP-----KLKN--------AHKISPVLRDFLE 252 (297)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHh---ccCCC-----Cccc--------cCCCCHHHHHHHH
Confidence 345677899999999999999999996421 1111111111 11100 0000 0001122567788
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||++.++++
T Consensus 253 ~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 253 RMLTREPQERATAQELLD 270 (297)
T ss_pred HHhcCCcccCcCHHHHhh
Confidence 999999999999999976
No 232
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=96.99 E-value=0.00098 Score=64.14 Aligned_cols=97 Identities=11% Similarity=0.123 Sum_probs=51.9
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCc-ceeeec-cccccccc--------------c
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISV-MEVVDA-NLLSWKDK--------------H 446 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~-~~v~d~-~l~~~~~~--------------~ 446 (495)
....+.++|+|+||+++.|++||+.|..... ...+..+......... .....+ ........ .
T Consensus 172 ~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (308)
T cd06615 172 GTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD--AKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNE 249 (308)
T ss_pred CCCCCccchHHHHHHHHHHHHhCCCCCCCcc--hhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcC
Confidence 3446678999999999999999999964321 1122222211110000 000000 00000000 0
Q ss_pred ---ccchhhHHHHHHHHHhhcCCCCccCchhHHHHHHH
Q 011044 447 ---FMTKEQCMSFVFNLAMECTVESPIRESTQRKLLQD 481 (495)
Q Consensus 447 ---~~~~~~~~~~~~~~~~~C~~~~p~~Rp~m~~v~~~ 481 (495)
.......-..+.++...|...+|.+||++.+|++.
T Consensus 250 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 250 PPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000112347788999999999999999999653
No 233
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=96.99 E-value=0.00058 Score=65.00 Aligned_cols=95 Identities=14% Similarity=0.137 Sum_probs=49.7
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhC--C--C-ccee-eeccccccccccc--cchhhHHH
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLS--I--S-VMEV-VDANLLSWKDKHF--MTKEQCMS 455 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~--~--~-~~~v-~d~~l~~~~~~~~--~~~~~~~~ 455 (495)
...+.++|||||||++.|+++|+.|....- .......+..... . . ..++ .+........... ......-.
T Consensus 184 ~~~~~~~DiwslG~il~el~~g~~~f~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (290)
T cd07862 184 SSYATPVDLWSVGCIFAEMFRRKPLFRGSS--DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDE 261 (290)
T ss_pred CCCCCccchHHHHHHHHHHHcCCCCcCCCC--HHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCH
Confidence 345678999999999999999998854211 1111112211110 0 0 0000 0000000000000 00001112
Q ss_pred HHHHHHhhcCCCCccCchhHHHHHH
Q 011044 456 FVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 456 ~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
.+.++...|...+|.+||++.|+++
T Consensus 262 ~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 262 LGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HHHHHHHHHhccCchhcCCHHHHhc
Confidence 3567899999999999999999864
No 234
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=96.99 E-value=0.00061 Score=65.79 Aligned_cols=78 Identities=14% Similarity=0.197 Sum_probs=49.3
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
+..+.++||||||+++.|+++|+.|.... +-...+.............+ .....+..+...
T Consensus 195 ~~~~~~sDv~slGvil~el~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~li~~ 255 (313)
T cd06633 195 GQYDGKVDVWSLGITCIELAERKPPLFNM-----NAMSALYHIAQNDSPTLQSN--------------EWTDSFRGFVDY 255 (313)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHhcCCCCCCcc--------------ccCHHHHHHHHH
Confidence 34566899999999999999999986432 11222222221111000000 011235677889
Q ss_pred cCCCCccCchhHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQ 480 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~ 480 (495)
|.+.+|.+||++.+++.
T Consensus 256 ~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 256 CLQKIPQERPASAELLR 272 (313)
T ss_pred HccCChhhCcCHHHHhc
Confidence 99999999999999964
No 235
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=96.99 E-value=0.00082 Score=62.49 Aligned_cols=78 Identities=14% Similarity=0.114 Sum_probs=50.6
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+|++|++++|+++|+.|.+.. +...............+ .......+..+..
T Consensus 175 ~~~~~~~~D~~slG~~~~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~li~ 234 (256)
T cd08530 175 GRPYSYKSDIWSLGCLLYEMATFAPPFEAR-----SMQDLRYKVQRGKYPPI---------------PPIYSQDLQNFIR 234 (256)
T ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHhcCCCCCC---------------chhhCHHHHHHHH
Confidence 344567899999999999999999996432 21121111111111110 0112234788899
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||++.++++
T Consensus 235 ~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 235 SMLQVKPKLRPNCDKILA 252 (256)
T ss_pred HHcCCCcccCCCHHHHhc
Confidence 999999999999999864
No 236
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=96.99 E-value=0.00068 Score=64.40 Aligned_cols=28 Identities=11% Similarity=0.120 Sum_probs=23.7
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCc
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
....+.++|+|||||++.|+++|+.|..
T Consensus 175 ~~~~~~~~DiwslGvil~el~~g~~pf~ 202 (287)
T cd07848 175 GAPYGKAVDMWSVGCILGELSDGQPLFP 202 (287)
T ss_pred CCCCCCchhHHhHHHHHHHHHhCCCCCC
Confidence 3445678999999999999999998854
No 237
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=96.98 E-value=0.00058 Score=63.84 Aligned_cols=78 Identities=17% Similarity=0.250 Sum_probs=48.8
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++||||+|+++.|+++|+.|.... .......+ ....... ..+ ....-..+..+...
T Consensus 182 ~~~~~~~Di~slG~il~el~~g~~p~~~~----~~~~~~~~-~~~~~~~----~~~----------~~~~~~~~~~li~~ 242 (263)
T cd06625 182 EGYGRKADVWSVGCTVVEMLTEKPPWAEF----EAMAAIFK-IATQPTN----PQL----------PSHVSPDARNFLRR 242 (263)
T ss_pred CCCCchhhhHHHHHHHHHHHhCCCCcccc----chHHHHHH-HhccCCC----CCC----------CccCCHHHHHHHHH
Confidence 34667899999999999999999985321 11111111 1111000 000 00112336678889
Q ss_pred cCCCCccCchhHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQ 480 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~ 480 (495)
|...+|.+||++.++++
T Consensus 243 ~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 243 TFVENAKKRPSAEELLR 259 (263)
T ss_pred HhhcCcccCCCHHHHhh
Confidence 99999999999999875
No 238
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=96.98 E-value=0.00057 Score=64.54 Aligned_cols=76 Identities=21% Similarity=0.308 Sum_probs=49.5
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
.+.++|+|+||+++.|+++|+.|.+.. ...+++....... .+.+.. ......+.++...|.
T Consensus 179 ~~~~~Dv~slG~~l~~ll~g~~p~~~~-----~~~~~~~~~~~~~-----~~~~~~---------~~~~~~~~~~i~~~l 239 (277)
T cd06917 179 YDTKADIWSLGITIYEMATGNPPYSDV-----DAFRAMMLIPKSK-----PPRLED---------NGYSKLLREFVAACL 239 (277)
T ss_pred cccchhHHHHHHHHHHHHhCCCCCCCC-----ChhhhhhccccCC-----CCCCCc---------ccCCHHHHHHHHHHc
Confidence 467899999999999999999996431 2222222111110 111100 012334777888999
Q ss_pred CCCccCchhHHHHHH
Q 011044 466 VESPIRESTQRKLLQ 480 (495)
Q Consensus 466 ~~~p~~Rp~m~~v~~ 480 (495)
..+|.+||++.+++.
T Consensus 240 ~~~p~~R~~~~~il~ 254 (277)
T cd06917 240 DEEPKERLSAEELLK 254 (277)
T ss_pred CCCcccCcCHHHHhh
Confidence 999999999999964
No 239
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=96.97 E-value=0.00089 Score=63.84 Aligned_cols=77 Identities=14% Similarity=0.206 Sum_probs=48.1
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
.+.++|+||||+++.|++||+.|.... +-...+.............+ ......+..+...|.
T Consensus 192 ~~~~~Dv~slG~il~el~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~li~~~l 253 (292)
T cd06644 192 YDYKADIWSLGITLIEMAQIEPPHHEL-----NPMRVLLKIAKSEPPTLSQP-------------SKWSMEFRDFLKTAL 253 (292)
T ss_pred CCchhhhHhHHHHHHHHhcCCCCCccc-----cHHHHHHHHhcCCCccCCCC-------------cccCHHHHHHHHHHh
Confidence 466899999999999999999885321 11122222211111000000 011233667888899
Q ss_pred CCCccCchhHHHHHH
Q 011044 466 VESPIRESTQRKLLQ 480 (495)
Q Consensus 466 ~~~p~~Rp~m~~v~~ 480 (495)
..+|.+||++.++++
T Consensus 254 ~~~p~~Rp~~~~il~ 268 (292)
T cd06644 254 DKHPETRPSAAQLLE 268 (292)
T ss_pred cCCcccCcCHHHHhc
Confidence 999999999999954
No 240
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=96.95 E-value=0.00059 Score=63.61 Aligned_cols=76 Identities=17% Similarity=0.250 Sum_probs=48.9
Q ss_pred cccCCCcceeehhhhhhcccC-CCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 385 RVSTNGDIYNFGIMIMETFTA-KKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tg-k~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
..+.++|+||||+++.|+++| ..|..... -..+........ .... .....+.++...
T Consensus 182 ~~~~~~Di~slG~~~~~l~~~~~~p~~~~~-----~~~~~~~~~~~~--------~~~~---------~~~~~~~~li~~ 239 (259)
T cd05037 182 SLTIAADKWSFGTTLLEICSNGEEPLSTLS-----SSEKERFYQDQH--------RLPM---------PDCAELANLINQ 239 (259)
T ss_pred CcchhhHHHHHHHHHHHHHhCCCCCcccCC-----chhHHHHHhcCC--------CCCC---------CCchHHHHHHHH
Confidence 467789999999999999995 45543211 111211111000 0000 001457789999
Q ss_pred cCCCCccCchhHHHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~~l 482 (495)
|...+|.+||++.+|++.|
T Consensus 240 ~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 240 CWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred HhccChhhCCCHHHHHHhc
Confidence 9999999999999998876
No 241
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=96.95 E-value=0.0007 Score=64.61 Aligned_cols=79 Identities=22% Similarity=0.271 Sum_probs=46.9
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++||||||+++.|+++|+.|... .... .-+.. .... ..+.+.... .....+..+...
T Consensus 193 ~~~~~~~Dv~slGvil~el~~g~~p~~~----~~~~-~~~~~-~~~~----~~~~~~~~~--------~~~~~~~~li~~ 254 (292)
T cd06658 193 LPYGTEVDIWSLGIMVIEMIDGEPPYFN----EPPL-QAMRR-IRDN----LPPRVKDSH--------KVSSVLRGFLDL 254 (292)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCC----CCHH-HHHHH-HHhc----CCCcccccc--------ccCHHHHHHHHH
Confidence 3456789999999999999999999532 1111 11111 1100 011110000 011124456667
Q ss_pred cCCCCccCchhHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQ 480 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~ 480 (495)
|...+|.+||++.++++
T Consensus 255 ~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 255 MLVREPSQRATAQELLQ 271 (292)
T ss_pred HccCChhHCcCHHHHhh
Confidence 89999999999999975
No 242
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=96.95 E-value=0.0004 Score=64.67 Aligned_cols=75 Identities=17% Similarity=0.253 Sum_probs=47.6
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhC-CCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLS-ISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~-~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
.+.++|+|+||+++.|+++|+.|.+... .. ..+..... .....+ .+ .....+.++...|
T Consensus 179 ~~~~~D~~slG~~l~~l~~g~~pf~~~~----~~-~~~~~~~~~~~~~~~-~~--------------~~~~~~~~li~~~ 238 (258)
T cd06632 179 YGLAADIWSLGCTVLEMATGKPPWSQLE----GV-AAVFKIGRSKELPPI-PD--------------HLSDEAKDFILKC 238 (258)
T ss_pred CCchhhhHHHHHHHHHHHhCCCCcccCc----HH-HHHHHHHhcccCCCc-CC--------------CcCHHHHHHHHHH
Confidence 6778999999999999999999964322 11 11111111 000000 00 1112355677889
Q ss_pred CCCCccCchhHHHHHH
Q 011044 465 TVESPIRESTQRKLLQ 480 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~~ 480 (495)
...+|.+||++.+++.
T Consensus 239 l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 239 LQRDPSLRPTAAELLE 254 (258)
T ss_pred hhcCcccCcCHHHHhc
Confidence 9999999999999864
No 243
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=96.94 E-value=0.001 Score=62.25 Aligned_cols=78 Identities=19% Similarity=0.203 Sum_probs=47.6
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
.+.++|||+||+++.|+++|+.|..... +-........... .+.+-.. ......+.++...|.
T Consensus 183 ~~~~~Dv~s~G~il~~l~~g~~pf~~~~----~~~~~~~~~~~~~-----~~~~~~~--------~~~~~~~~~li~~~l 245 (264)
T cd06626 183 HGRAADIWSLGCVVLEMATGKRPWSELD----NEFQIMFHVGAGH-----KPPIPDS--------LQLSPEGKDFLDRCL 245 (264)
T ss_pred CCcccchHHHHHHHHHHHhCCCCccCCc----chHHHHHHHhcCC-----CCCCCcc--------cccCHHHHHHHHHHc
Confidence 5678999999999999999999964321 1111111101110 0111000 011223557788999
Q ss_pred CCCccCchhHHHHHH
Q 011044 466 VESPIRESTQRKLLQ 480 (495)
Q Consensus 466 ~~~p~~Rp~m~~v~~ 480 (495)
..+|.+||++.|++.
T Consensus 246 ~~~p~~R~~~~~i~~ 260 (264)
T cd06626 246 ESDPKKRPTASELLQ 260 (264)
T ss_pred cCCcccCCCHHHHhc
Confidence 999999999999853
No 244
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=96.94 E-value=0.00025 Score=67.29 Aligned_cols=90 Identities=14% Similarity=0.104 Sum_probs=50.0
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhC---CC----cceeeec----ccccc--cccc--ccch
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLS---IS----VMEVVDA----NLLSW--KDKH--FMTK 450 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~---~~----~~~v~d~----~l~~~--~~~~--~~~~ 450 (495)
.+.++|||+||+++.|++||+.|.+..- -...+..... .. ...+.+. ..... .... ....
T Consensus 179 ~~~~~Dv~slG~~l~el~t~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (287)
T cd07840 179 YGPEVDMWSVGCILAELFLGKPIFQGST-----ELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFK 253 (287)
T ss_pred CChHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhc
Confidence 4678999999999999999998864211 1111221110 00 0000000 00000 0000 0000
Q ss_pred hhHHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 451 EQCMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 451 ~~~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
..+...+.++...|...+|.+||++.++++
T Consensus 254 ~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 254 HLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 012456889999999999999999999864
No 245
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=96.93 E-value=0.00046 Score=64.78 Aligned_cols=80 Identities=19% Similarity=0.209 Sum_probs=48.1
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
..+.++||||||+++.|+++|+.|........ ....+.+. ....+.... .......+.++...|
T Consensus 185 ~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~-~~~~~~~~-------~~~~~~~~~--------~~~~~~~~~~li~~~ 248 (267)
T cd06646 185 GYNQLCDIWAVGITAIELAELQPPMFDLHPMR-ALFLMSKS-------NFQPPKLKD--------KTKWSSTFHNFVKIS 248 (267)
T ss_pred CCcchhhHHHHHHHHHHHHhCCCCccccchhh-hheeeecC-------CCCCCCCcc--------ccccCHHHHHHHHHH
Confidence 35668999999999999999999864321100 00000000 000011100 001123466788899
Q ss_pred CCCCccCchhHHHHHH
Q 011044 465 TVESPIRESTQRKLLQ 480 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~~ 480 (495)
...+|.+||++.++++
T Consensus 249 l~~~P~~Rp~~~~il~ 264 (267)
T cd06646 249 LTKNPKKRPTAERLLT 264 (267)
T ss_pred hhCChhhCcCHHHHhc
Confidence 9999999999999875
No 246
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=96.92 E-value=0.00051 Score=65.01 Aligned_cols=84 Identities=14% Similarity=0.120 Sum_probs=51.9
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.....+.++||||+||++.|+++|+.|.... ....+-..+.+........ .... .....+.++.
T Consensus 167 ~~~~~~~~~DvwslGv~l~el~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~-~~~~--------------~~~~~~~~li 230 (277)
T cd05607 167 KEEPYSYPVDWFAMGCSIYEMVAGRTPFKDH-KEKVAKEELKRRTLEDEVK-FEHQ--------------NFTEESKDIC 230 (277)
T ss_pred ccCCCCCchhHHHHHHHHHHHHhCCCCCCCC-cchhhHHHHHHHhhccccc-cccc--------------cCCHHHHHHH
Confidence 3445678899999999999999999996431 1112222222222221110 0000 0122367888
Q ss_pred hhcCCCCccCchhHHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQD 481 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~~ 481 (495)
..|...+|.+||++.|+++.
T Consensus 231 ~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 231 RLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred HHHhccCHhhCCCCccchhh
Confidence 99999999999999877543
No 247
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=96.91 E-value=0.00096 Score=62.31 Aligned_cols=77 Identities=12% Similarity=0.163 Sum_probs=50.4
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++|+|+||+++.|+++|+.|.+. ................. + ...+...+.++...
T Consensus 180 ~~~~~~~Dv~slG~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~-----~----------~~~~~~~~~~li~~ 239 (260)
T cd08222 180 QGYDSKSDIWSLGCILYEMCCLAHAFEG-----QNFLSVVLRIVEGPTPS-----L----------PETYSRQLNSIMQS 239 (260)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCC-----ccHHHHHHHHHcCCCCC-----C----------cchhcHHHHHHHHH
Confidence 3456689999999999999999988532 22333333322211100 0 00122346778889
Q ss_pred cCCCCccCchhHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQ 480 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~ 480 (495)
|+..+|.+||++.|+++
T Consensus 240 ~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 240 MLNKDPSLRPSAAEILR 256 (260)
T ss_pred HhcCChhhCcCHHHHhh
Confidence 99999999999999864
No 248
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=96.91 E-value=0.00076 Score=63.94 Aligned_cols=98 Identities=11% Similarity=0.045 Sum_probs=51.5
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhC-CCc---cee-eecccccccccc--ccchhhHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLS-ISV---MEV-VDANLLSWKDKH--FMTKEQCM 454 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~-~~~---~~v-~d~~l~~~~~~~--~~~~~~~~ 454 (495)
.....+.++|+|+||+++.|++||+.|.+.. .....+.++.+.... ... ... ............ .....+-.
T Consensus 179 ~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (287)
T cd07838 179 LQSSYATPVDMWSVGCIFAELFRRRPLFRGT-SEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEIC 257 (287)
T ss_pred ccCCCCCcchhhhHHHHHHHHHhCCCcccCC-ChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhh
Confidence 3445677899999999999999997775421 111122222221110 000 000 000000000000 00000112
Q ss_pred HHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 455 SFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 455 ~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
..+.++...|.+.+|.+||++.+++.
T Consensus 258 ~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 258 EEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred HHHHHHHHHHhccCCccCCCHHHHhc
Confidence 34567889999999999999999863
No 249
>PLN00181 protein SPA1-RELATED; Provisional
Probab=96.90 E-value=0.00061 Score=74.61 Aligned_cols=81 Identities=16% Similarity=0.233 Sum_probs=49.3
Q ss_pred hhcCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 378 WEYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 378 ~~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
+|.......+.++|||||||+++||++|..|.... ...+..+.... .++... ......
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~---~~~~~~~~~~~--------~~~~~~-----------~~~~~~ 241 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEK---SRTMSSLRHRV--------LPPQIL-----------LNWPKE 241 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhH---HHHHHHHHHhh--------cChhhh-----------hcCHHH
Confidence 34444556778999999999999999987764321 00111111111 111110 011223
Q ss_pred HHHHhhcCCCCccCchhHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
..+...|...+|.+||+|.|+++
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhh
Confidence 46677899999999999999964
No 250
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=96.90 E-value=0.001 Score=62.91 Aligned_cols=93 Identities=16% Similarity=0.121 Sum_probs=49.9
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccC-----------CCCCHHHHHHHHhCCC-cceeeeccccccccccccchhh
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFN-----------GEMTLRRWVNDLLSIS-VMEVVDANLLSWKDKHFMTKEQ 452 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~-----------~~~~l~~wv~~~~~~~-~~~v~d~~l~~~~~~~~~~~~~ 452 (495)
..+.++|+||||+++.|++||+.|....-. +...-..|........ ....+.......... ..+.
T Consensus 175 ~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 251 (283)
T cd07830 175 SYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQ---LIPN 251 (283)
T ss_pred CcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHH---Hccc
Confidence 356789999999999999999877532100 0001111221111000 000000000000000 0001
Q ss_pred HHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 453 CMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 453 ~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
....+..+...|...+|.+||++.|++.
T Consensus 252 ~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 252 ASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred CCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 1345889999999999999999999864
No 251
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=96.86 E-value=0.00075 Score=63.95 Aligned_cols=75 Identities=19% Similarity=0.242 Sum_probs=46.5
Q ss_pred CCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcCCC
Q 011044 388 TNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECTVE 467 (495)
Q Consensus 388 ~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 467 (495)
.++|+||+||.++||+||+.|+...+ ....|+-...... .-|.+-+. . ....-+.-..|...
T Consensus 201 ~~sDiWSlGCtVvEM~Tg~~PW~~~~----~~~~~~~~ig~~~----~~P~ip~~-------l---s~~a~~Fl~~C~~~ 262 (313)
T KOG0198|consen 201 RESDIWSLGCTVVEMLTGKPPWSEFF----EEAEALLLIGRED----SLPEIPDS-------L---SDEAKDFLRKCFKR 262 (313)
T ss_pred ccchhhhcCCEEEeccCCCCcchhhc----chHHHHHHHhccC----CCCCCCcc-------c---CHHHHHHHHHHhhc
Confidence 47999999999999999999987641 1112221111111 01111111 0 11134557889999
Q ss_pred CccCchhHHHHHH
Q 011044 468 SPIRESTQRKLLQ 480 (495)
Q Consensus 468 ~p~~Rp~m~~v~~ 480 (495)
+|..||++.+.+.
T Consensus 263 ~p~~Rpta~eLL~ 275 (313)
T KOG0198|consen 263 DPEKRPTAEELLE 275 (313)
T ss_pred CcccCcCHHHHhh
Confidence 9999999999854
No 252
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=96.85 E-value=0.00097 Score=62.56 Aligned_cols=81 Identities=20% Similarity=0.185 Sum_probs=47.7
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
+..+.++|+||+||++.|+++|+.|....... ..+.... .... ..+... .. ......+.++...
T Consensus 184 ~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~-~~~~~~~----~~~~---~~~~~~-~~-------~~~~~~~~~li~~ 247 (267)
T cd06645 184 GGYNQLCDIWAVGITAIELAELQPPMFDLHPM-RALFLMT----KSNF---QPPKLK-DK-------MKWSNSFHHFVKM 247 (267)
T ss_pred CCCCchhhhHHHHHHHHHHhcCCCCcccccch-hhHHhhh----ccCC---CCCccc-cc-------CCCCHHHHHHHHH
Confidence 34567899999999999999999885322110 0010110 0000 000000 00 0011235678889
Q ss_pred cCCCCccCchhHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQ 480 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~ 480 (495)
|.+.+|.+||++.++++
T Consensus 248 ~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 248 ALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HccCCchhCcCHHHHhc
Confidence 99999999999999864
No 253
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=96.85 E-value=0.00077 Score=63.41 Aligned_cols=80 Identities=13% Similarity=0.127 Sum_probs=52.5
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++||||||+++.|++||+.|......+......|.... .... ...+ ..-..+.++..
T Consensus 180 ~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~-~~~~---------------~~~~~~~~li~ 242 (267)
T PHA03390 180 GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKL-PFIK---------------NVSKNANDFVQ 242 (267)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccC-Cccc---------------ccCHHHHHHHH
Confidence 34456789999999999999999999875544445555555443 1110 0000 01122556677
Q ss_pred hcCCCCccCchh-HHHHH
Q 011044 463 ECTVESPIREST-QRKLL 479 (495)
Q Consensus 463 ~C~~~~p~~Rp~-m~~v~ 479 (495)
.|.+.+|.+||+ +.+++
T Consensus 243 ~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 243 SMLKYNINYRLTNYNEII 260 (267)
T ss_pred HHhccChhhCCchHHHHh
Confidence 999999999995 67775
No 254
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=96.84 E-value=0.00082 Score=66.14 Aligned_cols=27 Identities=22% Similarity=0.171 Sum_probs=23.3
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCc
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
...+.++|+|||||++.||++|+.|..
T Consensus 193 ~~~~~~~DiwslG~il~el~~g~~pf~ 219 (355)
T cd07874 193 MGYKENVDIWSVGCIMGEMVRHKILFP 219 (355)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 345678999999999999999999853
No 255
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=96.83 E-value=0.001 Score=62.35 Aligned_cols=78 Identities=15% Similarity=0.247 Sum_probs=49.3
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
.+..+.++|+|++|+++.|++||+.|.... ... +-+..... . ..+.+. ......+..+..
T Consensus 186 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~----~~~-~~~~~~~~-~----~~~~~~----------~~~~~~~~~li~ 245 (267)
T cd06628 186 QTSYTRKADIWSLGCLVVEMLTGKHPFPDC----TQL-QAIFKIGE-N----ASPEIP----------SNISSEAIDFLE 245 (267)
T ss_pred cCCCCchhhhHHHHHHHHHHhhCCCCCCCc----cHH-HHHHHHhc-c----CCCcCC----------cccCHHHHHHHH
Confidence 345567899999999999999999996531 111 11111000 0 011110 011234667778
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||++.++++
T Consensus 246 ~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 246 KTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HHccCCchhCcCHHHHhh
Confidence 999999999999999864
No 256
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=96.82 E-value=0.00056 Score=65.28 Aligned_cols=90 Identities=17% Similarity=0.070 Sum_probs=48.4
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHH--HhCCCcceee-------ec-----cccccccccccch
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVND--LLSISVMEVV-------DA-----NLLSWKDKHFMTK 450 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~--~~~~~~~~v~-------d~-----~l~~~~~~~~~~~ 450 (495)
..+.++||||+|+++.|++||+.|.... .....+.+. .......... |. ........ ...
T Consensus 180 ~~~~~~Dv~slG~i~~~l~tg~~pf~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 253 (294)
T PLN00009 180 HYSTPVDIWSVGCIFAEMVNQKPLFPGD----SEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLA--TVV 253 (294)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHH--HhC
Confidence 3567899999999999999998885321 111111110 0010000000 00 00000000 000
Q ss_pred hhHHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 451 EQCMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 451 ~~~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
......+.++...|.+.+|.+||++.++++
T Consensus 254 ~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 254 PTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred cCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011223677889999999999999999974
No 257
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=96.81 E-value=0.00038 Score=65.97 Aligned_cols=94 Identities=16% Similarity=0.011 Sum_probs=48.7
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHh-CCCc-c-e-eeeccccccccccc-----cchhhHHHH
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLL-SISV-M-E-VVDANLLSWKDKHF-----MTKEQCMSF 456 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~-~~~~-~-~-v~d~~l~~~~~~~~-----~~~~~~~~~ 456 (495)
.+.++|+||||+++.|++||+.|....-. ...+.+.++... +... . . ...+.......... .........
T Consensus 177 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (283)
T cd07835 177 YSTPVDIWSIGCIFAEMVNRRPLFPGDSE-IDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDED 255 (283)
T ss_pred cCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHH
Confidence 46689999999999999999988532100 001111111100 0000 0 0 00000000000000 000111234
Q ss_pred HHHHHhhcCCCCccCchhHHHHHH
Q 011044 457 VFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 457 ~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
+.++...|.+.+|.+||++.|+++
T Consensus 256 ~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 256 GLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhc
Confidence 778999999999999999999864
No 258
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.81 E-value=0.00086 Score=66.37 Aligned_cols=80 Identities=15% Similarity=0.206 Sum_probs=54.4
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHH-HHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLR-RWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~-~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
..+++.++||||+||+|.+|+-||.|.-. +. .|.+- ..|.||+.--.+.... .-..++.++
T Consensus 546 k~Ki~r~SDvWSLGCILYqMvYgktPf~~-------~~n~~aKl------~aI~~P~~~Iefp~~~-----~~~~li~~m 607 (677)
T KOG0596|consen 546 KIKISRKSDVWSLGCILYQMVYGKTPFGQ-------IINQIAKL------HAITDPNHEIEFPDIP-----ENDELIDVM 607 (677)
T ss_pred ceeecCccchhhhhhHHHHHHhcCCchHH-------HHHHHHHH------HhhcCCCccccccCCC-----CchHHHHHH
Confidence 45689999999999999999999999432 22 34432 2344443211111111 111278899
Q ss_pred hhcCCCCccCchhHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~ 480 (495)
-.|.+-+|.+||+..++++
T Consensus 608 K~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 608 KCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HHHHhcCcccCCCcHHHhc
Confidence 9999999999999999853
No 259
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=96.79 E-value=0.0012 Score=62.61 Aligned_cols=77 Identities=17% Similarity=0.304 Sum_probs=48.0
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
.+.++|+|+||+++.|+++|+.|.+.... .... +....... .+.+.. ......+..+...|.
T Consensus 184 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~-~~~~~~~~-----~~~~~~---------~~~~~~l~~li~~~l 245 (283)
T cd06617 184 YDVKSDVWSLGITMIELATGRFPYDSWKT---PFQQ-LKQVVEEP-----SPQLPA---------EKFSPEFQDFVNKCL 245 (283)
T ss_pred cCccccchhhHHHHHHHHhCCCCCCcccc---CHHH-HHHHHhcC-----CCCCCc---------cccCHHHHHHHHHHc
Confidence 46689999999999999999999643111 1111 11111110 011100 011123667888899
Q ss_pred CCCccCchhHHHHHH
Q 011044 466 VESPIRESTQRKLLQ 480 (495)
Q Consensus 466 ~~~p~~Rp~m~~v~~ 480 (495)
..+|.+||++.++++
T Consensus 246 ~~~p~~Rp~~~~il~ 260 (283)
T cd06617 246 KKNYKERPNYPELLQ 260 (283)
T ss_pred cCChhhCcCHHHHhc
Confidence 999999999999964
No 260
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=96.79 E-value=0.00098 Score=63.13 Aligned_cols=78 Identities=15% Similarity=0.290 Sum_probs=48.9
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++||||||+++.|++||+.|....- +...-.. .... ..+.+. ...+...+.++...
T Consensus 201 ~~~~~~~DvwslG~~l~el~~g~~p~~~~~----~~~~~~~--~~~~----~~~~~~---------~~~~~~~~~~li~~ 261 (282)
T cd06636 201 ATYDYRSDIWSLGITAIEMAEGAPPLCDMH----PMRALFL--IPRN----PPPKLK---------SKKWSKKFIDFIEG 261 (282)
T ss_pred cCCCcccchhHHHHHHHHHHhCCCCccccC----HHhhhhh--HhhC----CCCCCc---------ccccCHHHHHHHHH
Confidence 345678999999999999999999964321 1111000 0000 000010 00123347788889
Q ss_pred cCCCCccCchhHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQ 480 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~ 480 (495)
|...+|.+||+..|+++
T Consensus 262 cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 262 CLVKNYLSRPSTEQLLK 278 (282)
T ss_pred HhCCChhhCcCHHHHhc
Confidence 99999999999999863
No 261
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=96.79 E-value=0.0018 Score=62.47 Aligned_cols=25 Identities=28% Similarity=0.434 Sum_probs=22.4
Q ss_pred ccCCCcceeehhhhhhcccCCCCCc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.+.++|+||||+++.|+++|+.|..
T Consensus 187 ~~~~~Diws~G~il~el~~g~~pf~ 211 (314)
T cd08216 187 YNEKSDIYSVGITACELANGHVPFK 211 (314)
T ss_pred CCcchhHHHHHHHHHHHHhCCCCCC
Confidence 4568999999999999999999964
No 262
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=96.79 E-value=0.00064 Score=66.35 Aligned_cols=94 Identities=12% Similarity=0.086 Sum_probs=49.9
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCC------------cceeeeccccccccccccchhh
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSIS------------VMEVVDANLLSWKDKHFMTKEQ 452 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~------------~~~v~d~~l~~~~~~~~~~~~~ 452 (495)
..+.++|+||||+++.|++||+.|....-. ......+....... ...+.+................
T Consensus 189 ~~~~~sDi~slG~~l~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (337)
T cd07852 189 RYTKGVDMWSVGCILGEMLLGKPLFPGTST--LNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPK 266 (337)
T ss_pred cccccchHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccC
Confidence 356789999999999999999988532110 00000010000000 0001110000000000000011
Q ss_pred HHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 453 CMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 453 ~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
....+.++...|...+|.+||++.++++
T Consensus 267 ~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 267 ASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred CCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 2345788999999999999999999975
No 263
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=96.78 E-value=0.00093 Score=68.60 Aligned_cols=78 Identities=19% Similarity=0.257 Sum_probs=51.0
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|||||||++.|++||+.|... .+....+......... + . . ......+.++..
T Consensus 245 ~~~~~~~~Dv~slG~~l~el~tg~~Pf~~-----~~~~~~~~~~~~~~~~----~-~-~---------~~~s~~~~~li~ 304 (478)
T PTZ00267 245 RKRYSKKADMWSLGVILYELLTLHRPFKG-----PSQREIMQQVLYGKYD----P-F-P---------CPVSSGMKALLD 304 (478)
T ss_pred CCCCCcHHhHHHHHHHHHHHHhCCCCCCC-----CCHHHHHHHHHhCCCC----C-C-C---------ccCCHHHHHHHH
Confidence 44567789999999999999999999642 2222333332221110 0 0 0 011123667888
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||++.+++.
T Consensus 305 ~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 305 PLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHhccChhhCcCHHHHHh
Confidence 999999999999999864
No 264
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=96.78 E-value=0.00096 Score=62.53 Aligned_cols=77 Identities=18% Similarity=0.238 Sum_probs=47.9
Q ss_pred ccccCCCcceeehhhhhhcc-cCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 384 GRVSTNGDIYNFGIMIMETF-TAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~-tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
...+.++||||||+++.|++ +|+.|.... ...... .+......... .....+..+..
T Consensus 184 ~~~~~~~DiwslG~~l~el~~~~~~p~~~~-----~~~~~~--~~~~~~~~~~~---------------~~~~~~~~li~ 241 (262)
T cd05077 184 KNLSIAADKWSFGTTLWEICYNGEIPLKDK-----TLAEKE--RFYEGQCMLVT---------------PSCKELADLMT 241 (262)
T ss_pred CCCCchhHHHHHHHHHHHHHhCCCCCCCCc-----chhHHH--HHHhcCccCCC---------------CChHHHHHHHH
Confidence 34567899999999999997 576664321 111110 01111000000 11223667889
Q ss_pred hcCCCCccCchhHHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~l 482 (495)
.|...+|.+||++.++++.+
T Consensus 242 ~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 242 HCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHcCCChhhCcCHHHHHHhc
Confidence 99999999999999998765
No 265
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=96.77 E-value=0.00097 Score=64.06 Aligned_cols=83 Identities=13% Similarity=0.069 Sum_probs=52.5
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+||||+++.|++||+.|... ....++.......... .+.. .......+.++..
T Consensus 190 ~~~~~~~~Di~slG~vl~el~~g~~pf~~-----~~~~~~~~~~~~~~~~---~~~~----------~~~~~~~~~~li~ 251 (305)
T cd05609 190 RQGYGKPVDWWAMGIILYEFLVGCVPFFG-----DTPEELFGQVISDDIE---WPEG----------DEALPADAQDLIS 251 (305)
T ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCC-----CCHHHHHHHHHhcccC---CCCc----------cccCCHHHHHHHH
Confidence 34567789999999999999999998532 1223333332222110 1100 0011233678999
Q ss_pred hcCCCCccCchhHHHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~l~ 483 (495)
.|.+.+|.+||++.++.+.++
T Consensus 252 ~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 252 RLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred HHhccChhhccCccCHHHHHh
Confidence 999999999999766655554
No 266
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=96.76 E-value=0.0014 Score=60.95 Aligned_cols=78 Identities=21% Similarity=0.224 Sum_probs=51.7
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+|++|+++.|+++|+.|.+. .+..+............ +. ......+.++..
T Consensus 177 ~~~~~~~~Dv~slG~~~~~l~~g~~p~~~-----~~~~~~~~~~~~~~~~~-----~~----------~~~~~~~~~~i~ 236 (258)
T cd08215 177 NKPYNYKSDIWSLGCVLYELCTLKHPFEG-----ENLLELALKILKGQYPP-----IP----------SQYSSELRNLVS 236 (258)
T ss_pred cCCCCccccHHHHHHHHHHHHcCCCCCCC-----CcHHHHHHHHhcCCCCC-----CC----------CCCCHHHHHHHH
Confidence 34466789999999999999999998643 12233333322211110 00 012234678889
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||++.++++
T Consensus 237 ~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 237 SLLQKDPEERPSIAQILQ 254 (258)
T ss_pred HHcCCChhhCcCHHHHhc
Confidence 999999999999999864
No 267
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=96.76 E-value=0.00064 Score=66.30 Aligned_cols=94 Identities=12% Similarity=0.095 Sum_probs=51.9
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCc----ceeeecccccc----ccccccc----hhh
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISV----MEVVDANLLSW----KDKHFMT----KEQ 452 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~----~~v~d~~l~~~----~~~~~~~----~~~ 452 (495)
..+.++|+|+||+++.|+++|+.|.+..- .......+........ ..+.+..+... ....... ...
T Consensus 188 ~~~~~~Di~slG~~l~el~~g~~pf~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (334)
T cd07855 188 EYTTAIDMWSVGCIFAEMLGRRQLFPGKN--YVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPK 265 (334)
T ss_pred ccccccchHHHHHHHHHHHcCCCccCCCC--hHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHccc
Confidence 45778999999999999999999864321 1111122222111110 01111111000 0000000 011
Q ss_pred HHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 453 CMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 453 ~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
....+.++...|...+|.+||++.+++.
T Consensus 266 ~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 266 ASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 2345788999999999999999999865
No 268
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=96.75 E-value=0.0005 Score=65.21 Aligned_cols=24 Identities=29% Similarity=0.373 Sum_probs=21.5
Q ss_pred ccCCCcceeehhhhhhcccCCCCC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~ 409 (495)
.+.++|||+||+++.|++||+.|.
T Consensus 178 ~~~~~Dv~slG~il~~l~tg~~p~ 201 (284)
T cd07860 178 YSTAVDIWSLGCIFAEMVTRRALF 201 (284)
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCC
Confidence 366799999999999999999885
No 269
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=96.75 E-value=0.00059 Score=65.57 Aligned_cols=25 Identities=16% Similarity=0.203 Sum_probs=21.8
Q ss_pred HHHHHHhhcCCCCccCchhHHHHHH
Q 011044 456 FVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 456 ~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
...++...|...+|.+||++.++++
T Consensus 282 ~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 282 HALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HHHHHHHHHhcCChhhccCHHHHhc
Confidence 3567999999999999999999864
No 270
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=96.73 E-value=0.0011 Score=63.43 Aligned_cols=80 Identities=19% Similarity=0.246 Sum_probs=48.5
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
.+..+.++|+||||+++.|+++|+.|.+..- ... .+........ +... ........+..+..
T Consensus 189 ~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~----~~~-~~~~~~~~~~-----~~~~--------~~~~~~~~l~~li~ 250 (293)
T cd06647 189 RKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN----PLR-ALYLIATNGT-----PELQ--------NPEKLSAIFRDFLN 250 (293)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----hhh-heeehhcCCC-----CCCC--------CccccCHHHHHHHH
Confidence 3445778999999999999999999964321 100 0000000000 0000 00011223556788
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|.+.+|.+||++.+++.
T Consensus 251 ~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 251 RCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred HHccCChhhCcCHHHHhc
Confidence 999999999999999964
No 271
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=96.73 E-value=0.00097 Score=65.12 Aligned_cols=94 Identities=13% Similarity=0.115 Sum_probs=50.2
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCC----Ccceeeecccccc------ccc--cccchhh
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSI----SVMEVVDANLLSW------KDK--HFMTKEQ 452 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~----~~~~v~d~~l~~~------~~~--~~~~~~~ 452 (495)
..+.++|+|+||+++.|+++|+.|....- .............. ....+.+...... ... .......
T Consensus 185 ~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (337)
T cd07858 185 EYTTAIDVWSVGCIFAELLGRKPLFPGKD--YVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPH 262 (337)
T ss_pred CCCCcccHHHHHHHHHHHHcCCCCCCCCC--hHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHccc
Confidence 36678999999999999999998864210 00000000010000 0001111110000 000 0000012
Q ss_pred HHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 453 CMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 453 ~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
....+.++...|...+|.+||++.++++
T Consensus 263 ~~~~~~~li~~~l~~~P~~Rps~~ell~ 290 (337)
T cd07858 263 ANPLAIDLLEKMLVFDPSKRITVEEALA 290 (337)
T ss_pred CCHHHHHHHHHHhcCChhhccCHHHHHc
Confidence 2344778999999999999999999964
No 272
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=96.70 E-value=0.00061 Score=65.21 Aligned_cols=80 Identities=20% Similarity=0.256 Sum_probs=48.2
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+|+||+++.|++||+.|....- ....... ..........++ ......+.++..
T Consensus 189 ~~~~~~~~Di~slGvil~~l~tg~~pf~~~~----~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~li~ 250 (297)
T cd06656 189 RKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN----PLRALYL-IATNGTPELQNP-------------ERLSAVFRDFLN 250 (297)
T ss_pred CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----cchheee-eccCCCCCCCCc-------------cccCHHHHHHHH
Confidence 3456678999999999999999999864211 1000000 000000000000 011122556788
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||++.++++
T Consensus 251 ~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 251 RCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHccCChhhCcCHHHHhc
Confidence 999999999999999965
No 273
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=96.70 E-value=0.00055 Score=64.94 Aligned_cols=25 Identities=32% Similarity=0.324 Sum_probs=21.9
Q ss_pred ccCCCcceeehhhhhhcccCCCCCc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.+.++||||||+++.|++||+.|..
T Consensus 179 ~~~~~Dv~slG~il~~l~tg~~~~~ 203 (285)
T cd07861 179 YSTPVDIWSIGTIFAEMATKKPLFH 203 (285)
T ss_pred cCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 4668999999999999999988753
No 274
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=96.70 E-value=0.0014 Score=62.34 Aligned_cols=82 Identities=11% Similarity=0.110 Sum_probs=48.9
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.....+.++|||||||++.|+++|+.|....... ..... +........... .. .....+..+.
T Consensus 174 ~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-~~~~~-~~~~~~~~~~~~-~~--------------~~s~~~~~li 236 (285)
T cd05631 174 NNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER-VKREE-VDRRVKEDQEEY-SE--------------KFSEDAKSIC 236 (285)
T ss_pred cCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc-hhHHH-HHHHhhcccccC-Cc--------------cCCHHHHHHH
Confidence 3445677899999999999999999996532111 01111 111111110000 00 0112366788
Q ss_pred hhcCCCCccCchh-----HHHHHH
Q 011044 462 MECTVESPIREST-----QRKLLQ 480 (495)
Q Consensus 462 ~~C~~~~p~~Rp~-----m~~v~~ 480 (495)
..|...+|.+||+ +.++.+
T Consensus 237 ~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 237 RMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred HHHhhcCHHHhcCCCCCCHHHHhc
Confidence 9999999999997 677653
No 275
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=96.68 E-value=0.00091 Score=63.41 Aligned_cols=91 Identities=16% Similarity=0.113 Sum_probs=49.0
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHh---CCC-------cceeeecccccccccccc---chhh
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLL---SIS-------VMEVVDANLLSWKDKHFM---TKEQ 452 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~---~~~-------~~~v~d~~l~~~~~~~~~---~~~~ 452 (495)
.+.++|||||||++.||+||+.|..... +.....+... ... ...+.+............ ....
T Consensus 177 ~~~~~DiwslG~il~~l~tg~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (284)
T cd07839 177 YSTSIDMWSAGCIFAELANAGRPLFPGN----DVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPK 252 (284)
T ss_pred cCcHHHHHHHHHHHHHHHhcCCCCcCCC----CHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhccc
Confidence 4678999999999999999999853211 1122222111 000 001111100000000000 0001
Q ss_pred HHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 453 CMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 453 ~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
....+.++...|...+|.+||++.+++.
T Consensus 253 ~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 253 LNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 1234667899999999999999999864
No 276
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=96.66 E-value=0.0012 Score=64.29 Aligned_cols=28 Identities=21% Similarity=0.431 Sum_probs=24.2
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCc
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
....+.++|||||||++.|+++|+.|.+
T Consensus 176 ~~~~~~~~DvwslG~il~~l~~g~~p~~ 203 (333)
T cd06650 176 GTHYSVQSDIWSMGLSLVEMAIGRYPIP 203 (333)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 3456678999999999999999999965
No 277
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=96.65 E-value=0.0019 Score=64.66 Aligned_cols=88 Identities=18% Similarity=0.229 Sum_probs=59.2
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCC--CHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEM--TLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~--~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
.+.++|+|||||++-|+++.+.|++....... .+..++++ .......|.+.... +....+..+...
T Consensus 135 ~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~----~~~~~~rP~i~~~~--------e~~~~l~~l~~~ 202 (484)
T KOG1023|consen 135 LTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK----GGSNPFRPSIELLN--------ELPPELLLLVAR 202 (484)
T ss_pred ccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh----cCCCCcCcchhhhh--------hcchHHHHHHHH
Confidence 57789999999999999999999876433222 24444444 11222233332110 222258889999
Q ss_pred cCCCCccCchhHHHHHHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQDSQKL 485 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~~l~~i 485 (495)
|..+.|..||++.+|-..++.+
T Consensus 203 cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 203 CWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred hcccChhhCccHHHHHhhhhhh
Confidence 9999999999999996666544
No 278
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=96.65 E-value=0.00042 Score=64.63 Aligned_cols=84 Identities=17% Similarity=0.265 Sum_probs=53.1
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+||+|+++.||++|+.|+.... ..+-...+........ .... .........+.++..
T Consensus 173 ~~~~~~~~Di~slG~il~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~~----~~~~--------~~~~~~~~~l~~li~ 238 (260)
T PF00069_consen 173 GKKYTRKSDIWSLGIILYELLTGKLPFEESN--SDDQLEIIEKILKRPL----PSSS--------QQSREKSEELRDLIK 238 (260)
T ss_dssp TSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS--HHHHHHHHHHHHHTHH----HHHT--------TSHTTSHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccc--chhhhhhhhhcccccc----cccc--------cccchhHHHHHHHHH
Confidence 5667889999999999999999999976531 0111111111111000 0000 001111356888999
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||++.++++
T Consensus 239 ~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 239 KMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHSSSSGGGSTTHHHHHT
T ss_pred HHccCChhHCcCHHHHhc
Confidence 999999999999999874
No 279
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=96.63 E-value=0.00054 Score=67.09 Aligned_cols=90 Identities=16% Similarity=0.149 Sum_probs=49.1
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHh---C------------CCcceeeec-ccccccccccc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLL---S------------ISVMEVVDA-NLLSWKDKHFM 448 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~---~------------~~~~~v~d~-~l~~~~~~~~~ 448 (495)
..+.++||||+|+++.|++||+.|... . +-...++... + ......+.. ..........
T Consensus 192 ~~~~~~DvwslGv~l~elltg~~pf~~----~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 265 (343)
T cd07851 192 HYNQTVDIWSVGCIMAELLTGKTLFPG----S-DHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKE- 265 (343)
T ss_pred CCCchHhHHHHHHHHHHHHhCCCCCCC----C-ChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHH-
Confidence 356789999999999999999988532 1 1111222111 0 000000000 0000000000
Q ss_pred chhhHHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 449 TKEQCMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 449 ~~~~~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
........+.++...|...+|.+||++.++++
T Consensus 266 ~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 266 VFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 00011234778999999999999999999853
No 280
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.61 E-value=0.0021 Score=60.94 Aligned_cols=76 Identities=17% Similarity=0.276 Sum_probs=48.5
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHH---HhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVND---LLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~---~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
..+.++|+|+|||++.|++||+.|.... ....+... ...... +.+ .......+..+.
T Consensus 183 ~~~~~~DiwslG~il~~l~~g~~pf~~~-----~~~~~~~~~~~~~~~~~-----~~~----------~~~~~~~~~~li 242 (286)
T cd06622 183 TYTVQSDVWSLGLSILEMALGRYPYPPE-----TYANIFAQLSAIVDGDP-----PTL----------PSGYSDDAQDFV 242 (286)
T ss_pred CCCcccchHhHHHHHHHHHhCCCCCCCc-----chhhHHHHHHHHhhcCC-----CCC----------CcccCHHHHHHH
Confidence 3467899999999999999999996431 11111111 111110 001 001223366778
Q ss_pred hhcCCCCccCchhHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~ 480 (495)
..|...+|.+||++.+++.
T Consensus 243 ~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 243 AKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred HHHcccCcccCCCHHHHhc
Confidence 8999999999999999965
No 281
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=96.61 E-value=0.00084 Score=65.72 Aligned_cols=26 Identities=23% Similarity=0.367 Sum_probs=22.8
Q ss_pred cccCCCcceeehhhhhhcccCCCCCc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
..+.++|||||||++.|+++|+.|..
T Consensus 191 ~~~~~~Dv~slGvil~el~~g~~pf~ 216 (342)
T cd07879 191 HYNQTVDIWSVGCIMAEMLTGKTLFK 216 (342)
T ss_pred ccCchHHHHHHHHHHHHHHhCCCCCC
Confidence 35678999999999999999999864
No 282
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=96.61 E-value=0.00095 Score=64.90 Aligned_cols=28 Identities=21% Similarity=0.302 Sum_probs=24.4
Q ss_pred HHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 453 CMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 453 ~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
+...+.++...|...+|.+||++.|+++
T Consensus 280 ~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 280 FSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 4456889999999999999999999963
No 283
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=96.60 E-value=0.002 Score=62.72 Aligned_cols=78 Identities=9% Similarity=0.161 Sum_probs=48.0
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCC---CCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNG---EMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVF 458 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~---~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~ 458 (495)
.....+.++||||||+++.|++||+.|.+..... ......|+..........+ .. .....+.
T Consensus 169 ~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~-p~--------------~~~~~~~ 233 (329)
T cd05618 169 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI-PR--------------SLSVKAA 233 (329)
T ss_pred cCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCC-CC--------------CCCHHHH
Confidence 3445567899999999999999999997532111 1222334433322111110 00 1122356
Q ss_pred HHHhhcCCCCccCchh
Q 011044 459 NLAMECTVESPIREST 474 (495)
Q Consensus 459 ~~~~~C~~~~p~~Rp~ 474 (495)
.+...|...+|.+||+
T Consensus 234 ~ll~~~L~~dP~~R~~ 249 (329)
T cd05618 234 SVLKSFLNKDPKERLG 249 (329)
T ss_pred HHHHHHhcCCHHHcCC
Confidence 7888999999999998
No 284
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=96.59 E-value=0.00046 Score=65.75 Aligned_cols=25 Identities=20% Similarity=0.323 Sum_probs=22.2
Q ss_pred ccCCCcceeehhhhhhcccCCCCCc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.+.++||||||+++.|++||+.|.+
T Consensus 181 ~~~~~Dv~slG~~l~~l~~g~~~f~ 205 (291)
T cd07870 181 YSSALDIWGAGCIFIEMLQGQPAFP 205 (291)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4567999999999999999999865
No 285
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=96.58 E-value=0.0024 Score=59.90 Aligned_cols=81 Identities=19% Similarity=0.274 Sum_probs=49.3
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++|||++|+++.|+++|+.|..... ......+......... .+.+ .+.....+.++...
T Consensus 183 ~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~----~~~~----------~~~~~~~~~~~i~~ 246 (268)
T cd06630 183 EQYGRSCDVWSVGCVIIEMATAKPPWNAEK--HSNHLALIFKIASATT----APSI----------PEHLSPGLRDVTLR 246 (268)
T ss_pred CCCCcccchHHHHHHHHHHHhCCCCCCCCC--CcchHHHHHHHhccCC----CCCC----------chhhCHHHHHHHHH
Confidence 345678999999999999999999864211 1111111111111000 0000 00112346778899
Q ss_pred cCCCCccCchhHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQ 480 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~ 480 (495)
|...+|.+||++.++++
T Consensus 247 ~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 247 CLELQPEDRPPSRELLK 263 (268)
T ss_pred HcCCCcccCcCHHHHhc
Confidence 99999999999999863
No 286
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=96.56 E-value=0.00077 Score=63.73 Aligned_cols=94 Identities=16% Similarity=0.147 Sum_probs=49.7
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCC-------ccee--eeccccccccccc-cchhhHH
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSIS-------VMEV--VDANLLSWKDKHF-MTKEQCM 454 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~-------~~~v--~d~~l~~~~~~~~-~~~~~~~ 454 (495)
..+.++|||+||+++.|+++|+.|....- ......++....... ..++ .+........... .....--
T Consensus 175 ~~~~~~Dv~slG~~l~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (282)
T cd07829 175 HYSTAVDIWSVGCIFAEMITGKPLFPGDS--EIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLD 252 (282)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhccccc
Confidence 56778999999999999999987753210 011111111111100 0000 0000000000000 0000112
Q ss_pred HHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 455 SFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 455 ~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
..+.++...|...+|.+||++.+|+.
T Consensus 253 ~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 253 PEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHHHHHHHhhccCcccCCCHHHHhh
Confidence 35888999999999999999999864
No 287
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=96.56 E-value=0.0018 Score=60.45 Aligned_cols=81 Identities=12% Similarity=0.144 Sum_probs=50.2
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|||+||+++.|++||+.|.+.. ....+.......... . .. .......+..+..
T Consensus 175 ~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~------~---~~-----~~~~~~~~~~~i~ 235 (265)
T cd05579 175 GQGHSKTVDWWSLGCILYEFLVGIPPFHGE-----TPEEIFQNILNGKIE------W---PE-----DVEVSDEAIDLIS 235 (265)
T ss_pred CCCCCcchhhHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHhcCCcC------C---Cc-----cccCCHHHHHHHH
Confidence 344667899999999999999999996432 122222222111100 0 00 0001234678888
Q ss_pred hcCCCCccCchhHHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~l 482 (495)
.|...+|.+||++.+|.+.|
T Consensus 236 ~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 236 KLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HHhcCCHhhcCCCccHHHHh
Confidence 89999999999996665444
No 288
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=96.55 E-value=0.0027 Score=61.89 Aligned_cols=85 Identities=11% Similarity=0.020 Sum_probs=48.8
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++||||+||++.||++|+.|.+.. +..+......... ..+..+..... .......+.++..
T Consensus 172 ~~~~~~~~DvwslG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~-~~~~~~~~~~~-------~~~~s~~~~~li~ 238 (333)
T cd05600 172 GKGYDFTVDYWSLGCMLYEFLCGFPPFSGS-----TPNETWENLKYWK-ETLQRPVYDDP-------RFNLSDEAWDLIT 238 (333)
T ss_pred CCCCCCccceecchHHHhhhhhCCCCCCCC-----CHHHHHHHHHhcc-ccccCCCCCcc-------ccccCHHHHHHHH
Confidence 345677899999999999999999996431 1111111111110 00000100000 0011123556677
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|....|.+||++.++++
T Consensus 239 ~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 239 KLINDPSRRFGSLEDIKN 256 (333)
T ss_pred HHhhChhhhcCCHHHHHh
Confidence 888899999999999964
No 289
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=96.55 E-value=0.0013 Score=63.39 Aligned_cols=26 Identities=23% Similarity=0.227 Sum_probs=22.8
Q ss_pred HHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 455 SFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 455 ~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
..+.++...|...+|.+||++.|++.
T Consensus 287 ~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 287 SQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 45778899999999999999999864
No 290
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=96.55 E-value=0.0017 Score=61.45 Aligned_cols=92 Identities=12% Similarity=0.067 Sum_probs=50.2
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHH--HHHHhCCCc----ceeee------cccccccc-ccccchh
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRW--VNDLLSISV----MEVVD------ANLLSWKD-KHFMTKE 451 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~w--v~~~~~~~~----~~v~d------~~l~~~~~-~~~~~~~ 451 (495)
..+.++|+|++|+++.|++||+.|... ......+ +........ ..+.+ ..+..... ......+
T Consensus 175 ~~~~~~Di~slG~~l~~l~tg~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (283)
T cd05118 175 GYSTPVDIWSVGCIFAELLSRRPLFPG----KSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFP 250 (283)
T ss_pred CCCchhHHHHHHHHHHHHHhCCCCCCC----CCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhh
Confidence 457789999999999999999877532 1111111 111111000 00000 00000000 0000011
Q ss_pred hHHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 452 QCMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 452 ~~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
..-..+.++...|...+|.+||++.+++.
T Consensus 251 ~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 251 NASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 23345789999999999999999999874
No 291
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=96.53 E-value=0.002 Score=62.07 Aligned_cols=74 Identities=12% Similarity=0.142 Sum_probs=47.6
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|||||||++.|++||+.|... .+...+.+........ +.. .....+.++..
T Consensus 167 ~~~~~~~~DvwslGvil~el~tg~~pf~~-----~~~~~~~~~~~~~~~~------~~~----------~~~~~~~~li~ 225 (312)
T cd05585 167 GHGYTKAVDWWTLGVLLYEMLTGLPPFYD-----ENVNEMYRKILQEPLR------FPD----------GFDRDAKDLLI 225 (312)
T ss_pred CCCCCCccceechhHHHHHHHhCCCCcCC-----CCHHHHHHHHHcCCCC------CCC----------cCCHHHHHHHH
Confidence 34456789999999999999999999542 2334444443332210 000 01122557788
Q ss_pred hcCCCCccCchhHHH
Q 011044 463 ECTVESPIRESTQRK 477 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~ 477 (495)
.|...+|.+||+...
T Consensus 226 ~~L~~dp~~R~~~~~ 240 (312)
T cd05585 226 GLLSRDPTRRLGYNG 240 (312)
T ss_pred HHcCCCHHHcCCCCC
Confidence 999999999986543
No 292
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=96.52 E-value=0.0018 Score=69.23 Aligned_cols=85 Identities=15% Similarity=0.105 Sum_probs=53.2
Q ss_pred hhcCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 378 WEYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 378 ~~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
+|.........++|||||||++.|++||+.|.+. .....++...+..... .+.. .+.....+
T Consensus 549 PE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~-----~~~~~~~~~il~~~~~---~p~~----------~~~~~~~~ 610 (669)
T cd05610 549 PELLLGKPHGPAVDWWALGVCLFEFLTGIPPFND-----ETPQQVFQNILNRDIP---WPEG----------EEKLSVNA 610 (669)
T ss_pred HHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHhcCCC---CCcc----------cccCCHHH
Confidence 3444445567889999999999999999999542 2333444333221110 0000 00112235
Q ss_pred HHHHhhcCCCCccCchhHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
..+...|...+|.+||++.|+++
T Consensus 611 ~~~l~~lL~~dP~~R~ta~e~l~ 633 (669)
T cd05610 611 QNAIEILLTMDPTKRAGLKELKQ 633 (669)
T ss_pred HHHHHHHcccChhHCcCHHHHHh
Confidence 56667789999999999999965
No 293
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=96.52 E-value=0.0018 Score=70.46 Aligned_cols=75 Identities=13% Similarity=0.154 Sum_probs=50.2
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
..+.++|||||||++.||+||+.|... .-+...++.......... + ......+..+...|
T Consensus 219 ~~s~KSDVWSLG~ILYELLTGk~PF~~----~~~~~qli~~lk~~p~lp-----i-----------~~~S~eL~dLI~~~ 278 (1021)
T PTZ00266 219 SYDDKSDMWALGCIIYELCSGKTPFHK----ANNFSQLISELKRGPDLP-----I-----------KGKSKELNILIKNL 278 (1021)
T ss_pred CCCchhHHHHHHHHHHHHHHCCCCCCc----CCcHHHHHHHHhcCCCCC-----c-----------CCCCHHHHHHHHHH
Confidence 356789999999999999999999542 223334433322111000 0 00122366788899
Q ss_pred CCCCccCchhHHHHH
Q 011044 465 TVESPIRESTQRKLL 479 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~ 479 (495)
...+|.+||++.|++
T Consensus 279 L~~dPeeRPSa~QlL 293 (1021)
T PTZ00266 279 LNLSAKERPSALQCL 293 (1021)
T ss_pred hcCChhHCcCHHHHh
Confidence 999999999999986
No 294
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=96.48 E-value=0.0024 Score=62.99 Aligned_cols=28 Identities=18% Similarity=0.150 Sum_probs=23.8
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCc
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
....+.++||||+|+++.||+||+.|..
T Consensus 196 ~~~~~~~~DiwSlG~il~el~tg~~pf~ 223 (359)
T cd07876 196 GMGYKENVDIWSVGCIMGELVKGSVIFQ 223 (359)
T ss_pred CCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 3446678999999999999999999854
No 295
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=96.47 E-value=0.0018 Score=62.25 Aligned_cols=91 Identities=14% Similarity=0.087 Sum_probs=48.9
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhC------C-------Ccceeeecccccccccc-ccch
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLS------I-------SVMEVVDANLLSWKDKH-FMTK 450 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~------~-------~~~~v~d~~l~~~~~~~-~~~~ 450 (495)
..+.++||||||+++.|+++|+.|... . +-....+.... . ......+.......... ....
T Consensus 203 ~~~~~~Dv~slG~il~el~~g~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (311)
T cd07866 203 RYTTAVDIWGIGCVFAEMFTRRPILQG----K-SDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERF 277 (311)
T ss_pred ccCchhHhHHHHHHHHHHHhCCCCCCC----C-CHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHc
Confidence 356789999999999999999988532 1 11111111110 0 00000000000000000 0000
Q ss_pred hhHHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 451 EQCMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 451 ~~~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
......+.++...|...+|.+||++.|++.
T Consensus 278 ~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 278 GKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred ccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 011244778899999999999999999864
No 296
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=96.46 E-value=0.0016 Score=61.71 Aligned_cols=93 Identities=13% Similarity=0.143 Sum_probs=49.4
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCC---cceeeeccc------cccccccccchh----
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSIS---VMEVVDANL------LSWKDKHFMTKE---- 451 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~---~~~v~d~~l------~~~~~~~~~~~~---- 451 (495)
..+.++|+||||+++.|++||+.|....-. ..-...+....... ..++.+..- ....... ...+
T Consensus 177 ~~~~~~Di~slG~i~~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 253 (286)
T cd07847 177 QYGPPVDVWAIGCVFAELLTGQPLWPGKSD--VDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETR-EPLESKFP 253 (286)
T ss_pred CcCchhhhHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccc-cCHHHHhc
Confidence 356789999999999999999988643211 01111111111110 001111000 0000000 0000
Q ss_pred hHHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 452 QCMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 452 ~~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
.-...+.++...|...+|.+||++.|++.
T Consensus 254 ~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 254 NISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 01234678899999999999999999864
No 297
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=96.46 E-value=0.0015 Score=70.60 Aligned_cols=89 Identities=18% Similarity=0.233 Sum_probs=53.4
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVF 458 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~ 458 (495)
|.......+.++|||||||++.||+||+.|....-...+. .+... .++.-... ..+....+.
T Consensus 201 E~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~----~~~~i-------~~P~~~~p-------~~~iP~~L~ 262 (932)
T PRK13184 201 ERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS----YRDVI-------LSPIEVAP-------YREIPPFLS 262 (932)
T ss_pred HHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh----hhhhc-------cChhhccc-------cccCCHHHH
Confidence 4444455678899999999999999999996431111110 00000 01100000 001123366
Q ss_pred HHHhhcCCCCccCch-hHHHHHHHHHHH
Q 011044 459 NLAMECTVESPIRES-TQRKLLQDSQKL 485 (495)
Q Consensus 459 ~~~~~C~~~~p~~Rp-~m~~v~~~l~~i 485 (495)
+++..|.+.+|.+|| ++.++.+.|+..
T Consensus 263 ~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 263 QIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 788999999999995 677777777654
No 298
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=96.44 E-value=0.0024 Score=59.24 Aligned_cols=77 Identities=21% Similarity=0.291 Sum_probs=48.8
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++|||++|+++.|+++|+.|... ........+... ... +.+ .......+..+...
T Consensus 174 ~~~~~~~Dv~~lG~~l~~l~~g~~p~~~----~~~~~~~~~~~~-~~~-----~~~----------~~~~~~~~~~~i~~ 233 (254)
T cd06627 174 SGASTASDIWSLGCTVIELLTGNPPYYD----LNPMAALFRIVQ-DDH-----PPL----------PEGISPELKDFLMQ 233 (254)
T ss_pred CCCCcchhHHHHHHHHHHHHhCCCCCCC----ccHHHHHHHHhc-cCC-----CCC----------CCCCCHHHHHHHHH
Confidence 3366789999999999999999988542 112222221111 100 000 00112336678889
Q ss_pred cCCCCccCchhHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQ 480 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~ 480 (495)
|...+|.+||++.+++.
T Consensus 234 ~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 234 CFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHhCChhhCcCHHHHhc
Confidence 99999999999999863
No 299
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=96.43 E-value=0.0029 Score=60.06 Aligned_cols=97 Identities=12% Similarity=0.043 Sum_probs=50.0
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHh-CCC---cce--eeeccccccccc-cccchhhHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLL-SIS---VME--VVDANLLSWKDK-HFMTKEQCMS 455 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~-~~~---~~~--v~d~~l~~~~~~-~~~~~~~~~~ 455 (495)
....+.++|+||+||++.|+++|+.|....- ....+.+...... +.. ... +....+...... ..........
T Consensus 181 ~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (288)
T cd07863 181 QSTYATPVDMWSVGCIFAEMFRRKPLFCGNS-EADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEE 259 (288)
T ss_pred CCCCCCcchhhhHHHHHHHHHhCCcCcCCCC-HHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCH
Confidence 3456778999999999999999988743210 0011111111110 000 000 000000000000 0000011223
Q ss_pred HHHHHHhhcCCCCccCchhHHHHHH
Q 011044 456 FVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 456 ~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
...++...|.+.+|.+||++.|++.
T Consensus 260 ~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 260 SGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred HHHHHHHHHhccCcccCCCHHHHhc
Confidence 4668889999999999999999863
No 300
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=96.42 E-value=0.0015 Score=63.77 Aligned_cols=94 Identities=10% Similarity=0.054 Sum_probs=51.0
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCC----cceeeecccccc---ccc-cccch----hh
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSIS----VMEVVDANLLSW---KDK-HFMTK----EQ 452 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~----~~~v~d~~l~~~---~~~-~~~~~----~~ 452 (495)
..+.++||||+||++.|++||+.|..... ......++...+... ...+.+...... ... ..... ..
T Consensus 186 ~~~~~~DvwslGvil~el~~G~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (336)
T cd07849 186 GYTKAIDIWSVGCILAEMLSNRPLFPGKD--YLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPN 263 (336)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcc
Confidence 35678999999999999999998864211 011111111111111 111111111000 000 00000 01
Q ss_pred HHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 453 CMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 453 ~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
....+..+...|...+|.+||++.++++
T Consensus 264 ~~~~~~~li~~~l~~dP~~Rpt~~e~l~ 291 (336)
T cd07849 264 ADPKALDLLDKMLTFNPHKRITVEEALA 291 (336)
T ss_pred cCcHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1234778999999999999999999865
No 301
>PHA03207 serine/threonine kinase US3; Provisional
Probab=96.41 E-value=0.0023 Score=63.88 Aligned_cols=28 Identities=14% Similarity=0.189 Sum_probs=23.8
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCc
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
....+.++|||||||++.|+++|+.|..
T Consensus 261 ~~~~~~~~DvwslGvil~el~~g~~pf~ 288 (392)
T PHA03207 261 LDPYCAKTDIWSAGLVLFEMSVKNVTLF 288 (392)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 3445678999999999999999999853
No 302
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=96.39 E-value=0.0016 Score=62.38 Aligned_cols=93 Identities=12% Similarity=0.051 Sum_probs=49.1
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCccee----eec------cccccccc-cccchhhHH
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEV----VDA------NLLSWKDK-HFMTKEQCM 454 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v----~d~------~l~~~~~~-~~~~~~~~~ 454 (495)
.+.++||||+|+++.||+||+.|....- .......+...+....... .+. ........ .........
T Consensus 182 ~~~~~Dv~slG~~l~el~tg~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (301)
T cd07873 182 YSTQIDMWGVGCIFYEMSTGRPLFPGST--VEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLD 259 (301)
T ss_pred CccHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCC
Confidence 4568999999999999999998854210 0011111111111111100 000 00000000 000000112
Q ss_pred HHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 455 SFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 455 ~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
..+.++...|...+|.+||++.|+++
T Consensus 260 ~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 260 SDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 23567899999999999999999975
No 303
>PTZ00284 protein kinase; Provisional
Probab=96.37 E-value=0.0014 Score=67.09 Aligned_cols=28 Identities=25% Similarity=0.303 Sum_probs=24.1
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCc
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
....+.++|||||||++.||+||+.|.+
T Consensus 319 ~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 319 GLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred cCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 3446678999999999999999999965
No 304
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=96.36 E-value=0.00095 Score=64.92 Aligned_cols=95 Identities=13% Similarity=0.050 Sum_probs=50.4
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCC----------CCCHHHHHHHHhCCCcceeeec-cccccccccccchhhH
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNG----------EMTLRRWVNDLLSISVMEVVDA-NLLSWKDKHFMTKEQC 453 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~----------~~~l~~wv~~~~~~~~~~v~d~-~l~~~~~~~~~~~~~~ 453 (495)
..+.++|+|+||+++.|++||+.|....... +....+|.+.........+... ......... ......
T Consensus 182 ~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 260 (328)
T cd07856 182 KYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFS-EKFKNA 260 (328)
T ss_pred CcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHH-HHcCCC
Confidence 3567899999999999999999885421100 0011222222111111111000 000000000 000012
Q ss_pred HHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 454 MSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 454 ~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
...+.++...|...+|.+||++.+++.
T Consensus 261 ~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 261 DPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 245777888999999999999999864
No 305
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=96.36 E-value=0.0028 Score=59.19 Aligned_cols=79 Identities=16% Similarity=0.174 Sum_probs=49.2
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
.+.++|||+||+++.|++||+.|.... +....+......... ..+.. ...+...+.++...|.
T Consensus 170 ~~~~~Dv~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~--~~~~~----------~~~~~~~~~~~i~~~l 232 (260)
T cd05611 170 DDKMSDWWSLGCVIFEFLFGYPPFHAE-----TPDAVFDNILSRRIN--WPEEV----------KEFCSPEAVDLINRLL 232 (260)
T ss_pred CcchhhhHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhcccC--CCCcc----------cccCCHHHHHHHHHHc
Confidence 567899999999999999999996431 222222222111100 00000 0112344788999999
Q ss_pred CCCccCchhHHHHHHH
Q 011044 466 VESPIRESTQRKLLQD 481 (495)
Q Consensus 466 ~~~p~~Rp~m~~v~~~ 481 (495)
..+|.+||+..++.+.
T Consensus 233 ~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 233 CMDPAKRLGANGYQEI 248 (260)
T ss_pred cCCHHHccCCCcHHHH
Confidence 9999999987765443
No 306
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=96.36 E-value=0.0026 Score=60.50 Aligned_cols=25 Identities=24% Similarity=0.285 Sum_probs=22.1
Q ss_pred ccCCCcceeehhhhhhcccCCCCCc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.+.++||||+|+++.|+++|+.|..
T Consensus 181 ~~~~~Dv~slG~il~~l~~g~~~~~ 205 (291)
T cd07844 181 YSTSLDMWGVGCIFYEMATGRPLFP 205 (291)
T ss_pred cCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4668999999999999999998864
No 307
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=96.36 E-value=0.0016 Score=64.57 Aligned_cols=25 Identities=16% Similarity=0.268 Sum_probs=22.2
Q ss_pred ccCCCcceeehhhhhhcccCCCCCc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.+.++||||+||++.||++|+.|.+
T Consensus 182 ~~~~~DiwslG~il~el~~g~~pf~ 206 (372)
T cd07853 182 YTSAVDIWSVGCIFAELLGRRILFQ 206 (372)
T ss_pred CCcHHHHHhHHHHHHHHHcCCCCCC
Confidence 4678999999999999999999864
No 308
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=96.36 E-value=0.0028 Score=61.19 Aligned_cols=81 Identities=15% Similarity=0.147 Sum_probs=49.7
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+||||+++.|+++|+.|..... .-..+.+. ..... ... ........+.++..
T Consensus 206 ~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~----~~~~~~~~-~~~~~------~~~--------~~~~~~~~~~~li~ 266 (316)
T cd05574 206 GDGHGSAVDWWTLGILLYEMLYGTTPFKGSN----RDETFSNI-LKKEV------TFP--------GSPPVSSSARDLIR 266 (316)
T ss_pred CCCCCchHHHHHHHHHHHHHhhCCCCCCCCc----hHHHHHHH-hcCCc------cCC--------CccccCHHHHHHHH
Confidence 4456778999999999999999999964321 11112111 11100 000 00001234788899
Q ss_pred hcCCCCccCchhHHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQDS 482 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~l 482 (495)
.|.+.+|.+||++...++++
T Consensus 267 ~~l~~~p~~R~s~~~~~~~l 286 (316)
T cd05574 267 KLLVKDPSKRLGSKRGAAEI 286 (316)
T ss_pred HHccCCHhHCCCchhhHHHH
Confidence 99999999999955554444
No 309
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=96.35 E-value=0.0024 Score=60.99 Aligned_cols=80 Identities=18% Similarity=0.249 Sum_probs=48.8
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+||||+++.|+++|+.|.... ........++...+.....+ . .....+.++..
T Consensus 190 ~~~~~~~~Dv~slGvil~el~tg~~p~~~~--~~~~~~~~~~~~~~~~~~~~--~--------------~~~~~l~~li~ 251 (292)
T cd06657 190 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPKLKNL--H--------------KVSPSLKGFLD 251 (292)
T ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhhCCcccCCc--c--------------cCCHHHHHHHH
Confidence 344567899999999999999999985321 11111122222222111100 0 01122456677
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||++.++++
T Consensus 252 ~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 252 RLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHhCCcccCcCHHHHhc
Confidence 899999999999999965
No 310
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=96.33 E-value=0.0035 Score=60.92 Aligned_cols=27 Identities=19% Similarity=0.457 Sum_probs=23.5
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCc
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
...+.++|||||||++.|++||+.|..
T Consensus 184 ~~~~~~~DiwslG~il~el~~g~~Pf~ 210 (330)
T cd05601 184 GTYGVECDWWSLGVIAYEMIYGRSPFH 210 (330)
T ss_pred CCCCCcceeecccceeeeeccCCCCCC
Confidence 345678999999999999999999954
No 311
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=96.29 E-value=0.0034 Score=62.04 Aligned_cols=28 Identities=18% Similarity=0.139 Sum_probs=23.9
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCc
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
....+.++|||||||++.||+||+.|..
T Consensus 199 ~~~~~~~~DiwSlG~il~ell~g~~pf~ 226 (364)
T cd07875 199 GMGYKENVDIWSVGCIMGEMIKGGVLFP 226 (364)
T ss_pred CCCCCchhhHHhHHHHHHHHHhCCCCCC
Confidence 3456778999999999999999998854
No 312
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=96.29 E-value=0.0048 Score=60.51 Aligned_cols=29 Identities=17% Similarity=0.298 Sum_probs=24.8
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCc
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.....+.++|||||||++.||++|+.|..
T Consensus 203 ~~~~~~~~~DiwSlG~il~ell~g~~Pf~ 231 (350)
T cd05573 203 RGTPYGLECDWWSLGVILYEMLYGFPPFY 231 (350)
T ss_pred cCCCCCCceeeEecchhhhhhccCCCCCC
Confidence 34456789999999999999999999964
No 313
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=96.28 E-value=0.0033 Score=59.51 Aligned_cols=77 Identities=12% Similarity=0.146 Sum_probs=45.3
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.....+.++||||||+++.|++||+.|....-. ........+....... .+ .+.....+.++.
T Consensus 170 ~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~------~~----------~~~~~~~~~~li 232 (280)
T cd05608 170 QGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-KVENKELKQRILNDSV------TY----------PDKFSPASKSFC 232 (280)
T ss_pred cCCCCCccccHHHHHHHHHHHHhCCCCCCCCCc-chhHHHHHHhhcccCC------CC----------cccCCHHHHHHH
Confidence 344566789999999999999999999643111 1111111111111110 00 001123366778
Q ss_pred hhcCCCCccCchhH
Q 011044 462 MECTVESPIRESTQ 475 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m 475 (495)
..|...+|.+||+.
T Consensus 233 ~~~l~~~P~~R~~~ 246 (280)
T cd05608 233 EALLAKDPEKRLGF 246 (280)
T ss_pred HHHhcCCHHHhcCC
Confidence 89999999999944
No 314
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=96.28 E-value=0.0014 Score=62.21 Aligned_cols=91 Identities=14% Similarity=0.180 Sum_probs=49.3
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHH--HHHHHhCCC-------cceeeeccccccccccc----cchhh
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRR--WVNDLLSIS-------VMEVVDANLLSWKDKHF----MTKEQ 452 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~--wv~~~~~~~-------~~~v~d~~l~~~~~~~~----~~~~~ 452 (495)
.+.++|||++|+++.|++||+.|.. +..+... ++...+... ..++.+..-........ .....
T Consensus 178 ~~~~~Di~slG~~l~~l~tg~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (286)
T cd07832 178 YDPGVDLWAVGCIFAELLNGSPLFP----GENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPD 253 (286)
T ss_pred CCchhHHHHHHHHHHHHHcCCcCcC----CCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCC
Confidence 4678999999999999999965532 2222222 222211110 00000000000000000 00012
Q ss_pred HHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 453 CMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 453 ~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
....+.++...|...+|.+||++.+++.
T Consensus 254 ~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 254 ASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred ccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 2356788999999999999999999864
No 315
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=96.25 E-value=0.0031 Score=60.11 Aligned_cols=91 Identities=13% Similarity=0.137 Sum_probs=49.2
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhC---CCcce----eee-ccc--ccc-cccc-ccchhh
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLS---ISVME----VVD-ANL--LSW-KDKH-FMTKEQ 452 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~---~~~~~----v~d-~~l--~~~-~~~~-~~~~~~ 452 (495)
..+.++|+|+||+++.|++||+.|... ..+... ....+. ..... +.+ +.. ... .... ....+.
T Consensus 188 ~~~~~~Di~slG~~l~~l~~g~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (295)
T cd07837 188 HYSTPVDIWSVGCIFAEMSRKQPLFPG----DSELQQ-LLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPD 262 (295)
T ss_pred CCCchHHHHHHHHHHHHHHcCCCCCCC----CCHHHH-HHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccc
Confidence 356789999999999999999988532 222222 211110 00000 000 000 000 0000 000011
Q ss_pred HHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 453 CMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 453 ~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
....+.++...|...+|.+||++.|++.
T Consensus 263 ~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 263 LSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred cCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 2234677889999999999999999864
No 316
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=96.24 E-value=0.0039 Score=60.31 Aligned_cols=76 Identities=9% Similarity=0.097 Sum_probs=49.1
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+|||||++.|++||+.|.+. .+-....+........ -+. .....+.++..
T Consensus 170 ~~~~~~~~DiwslGvil~~l~~G~~pf~~-----~~~~~~~~~i~~~~~~---~~~-------------~~~~~~~~li~ 228 (318)
T cd05570 170 YQPYGPAVDWWALGVLLYEMLAGQSPFEG-----DDEDELFQSILEDEVR---YPR-------------WLSKEAKSILK 228 (318)
T ss_pred CCCCCcchhhhhHHHHHHHHhhCCCCCCC-----CCHHHHHHHHHcCCCC---CCC-------------cCCHHHHHHHH
Confidence 34567789999999999999999999642 1222222222221110 000 11123667888
Q ss_pred hcCCCCccCchhH-----HHHH
Q 011044 463 ECTVESPIRESTQ-----RKLL 479 (495)
Q Consensus 463 ~C~~~~p~~Rp~m-----~~v~ 479 (495)
.|...+|.+||+. .+++
T Consensus 229 ~~l~~dP~~R~s~~~~~~~~ll 250 (318)
T cd05570 229 SFLTKNPEKRLGCLPTGEQDIK 250 (318)
T ss_pred HHccCCHHHcCCCCCCCHHHHh
Confidence 9999999999999 7764
No 317
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=96.22 E-value=0.0025 Score=62.65 Aligned_cols=28 Identities=18% Similarity=0.150 Sum_probs=23.6
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCc
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
....+.++||||||+++.|+++|+.|..
T Consensus 191 ~~~~~~~~DvwslG~~l~~l~~g~~pf~ 218 (353)
T cd07850 191 GMGYKENVDIWSVGCIMGEMIRGTVLFP 218 (353)
T ss_pred CCCCCCchhhHhHHHHHHHHHHCCCCCC
Confidence 3446778999999999999999998853
No 318
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=96.22 E-value=0.0037 Score=59.42 Aligned_cols=80 Identities=11% Similarity=0.148 Sum_probs=50.2
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCC-CHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEM-TLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~-~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
.+.++|||+||+++.|++||+.|... .+.. ....+.+...... +.. .......+.++...|
T Consensus 185 ~~~~~Dv~slG~il~el~tg~~p~~~--~~~~~~~~~~~~~~~~~~------~~~----------~~~~~~~l~~li~~~ 246 (288)
T cd05583 185 HDKAVDWWSLGVLTFELLTGASPFTV--DGEQNSQSEISRRILKSK------PPF----------PKTMSAEARDFIQKL 246 (288)
T ss_pred CcchhhhHHHHHHHHHHHhCCCCccc--CcccchHHHHHHHHHccC------CCC----------CcccCHHHHHHHHHH
Confidence 46789999999999999999999632 1111 1222222222111 000 001112356778899
Q ss_pred CCCCccCchhHHHHHHHHH
Q 011044 465 TVESPIRESTQRKLLQDSQ 483 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~~~l~ 483 (495)
.+.+|.+||++++|.+.|+
T Consensus 247 l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 247 LEKDPKKRLGANGADEIKN 265 (288)
T ss_pred hcCCHhhccCcchHHHHhc
Confidence 9999999999999876664
No 319
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=96.21 E-value=0.0037 Score=59.34 Aligned_cols=80 Identities=16% Similarity=0.142 Sum_probs=47.8
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++||||||+++.|+++|+.|....- .......+...+......+ . ......+.++..
T Consensus 175 ~~~~~~~~Diws~G~~l~el~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~~~li~ 237 (285)
T cd05605 175 NERYTFSPDWWGLGCLIYEMIEGKSPFRQRK--EKVKREEVERRVKEDQEEY-S--------------EKFSEAARSICR 237 (285)
T ss_pred CCCCCccccchhHHHHHHHHHHCCCCCCCCc--hhhHHHHHHHHhhhccccc-C--------------cccCHHHHHHHH
Confidence 3456678999999999999999999964211 1111111211111110000 0 011223667899
Q ss_pred hcCCCCccCch-----hHHHHH
Q 011044 463 ECTVESPIRES-----TQRKLL 479 (495)
Q Consensus 463 ~C~~~~p~~Rp-----~m~~v~ 479 (495)
.|...+|.+|| ++.++.
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~l~ 259 (285)
T cd05605 238 QLLTKDPGFRLGCRGEGAEEVK 259 (285)
T ss_pred HHccCCHHHhcCCCCCCHHHHh
Confidence 99999999999 666763
No 320
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=96.20 E-value=0.0033 Score=59.74 Aligned_cols=79 Identities=9% Similarity=0.070 Sum_probs=46.7
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.....+.++|+||||+++.|++||+.|....-. ......+.+. ....... .. ......+.++.
T Consensus 174 ~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~-~~~~~~~~~~-~~~~~~~-~~--------------~~~~~~~~~li 236 (285)
T cd05632 174 NNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKE-KVKREEVDRR-VLETEEV-YS--------------AKFSEEAKSIC 236 (285)
T ss_pred cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHh-hhccccc-cC--------------ccCCHHHHHHH
Confidence 344567789999999999999999999643110 0011111111 1111000 00 01122366788
Q ss_pred hhcCCCCccCchhHHH
Q 011044 462 MECTVESPIRESTQRK 477 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~ 477 (495)
..|...+|.+||++.+
T Consensus 237 ~~~l~~~P~~R~~~~~ 252 (285)
T cd05632 237 KMLLTKDPKQRLGCQE 252 (285)
T ss_pred HHHccCCHhHcCCCcc
Confidence 8999999999999543
No 321
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=96.18 E-value=0.0028 Score=60.55 Aligned_cols=26 Identities=19% Similarity=0.218 Sum_probs=23.2
Q ss_pred HHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 455 SFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 455 ~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
..+.++...|...+|.+||++.||++
T Consensus 256 ~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 256 DDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 45778999999999999999999975
No 322
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=96.18 E-value=0.0056 Score=57.04 Aligned_cols=78 Identities=14% Similarity=0.148 Sum_probs=49.3
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+|++|+++.|+++|+.|.+..-. ....++.......... ..+ .....+.++..
T Consensus 173 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~-~~~--------------~~~~~~~~~i~ 234 (258)
T cd05578 173 RQGYSVAVDWWSLGVTAYECLRGKRPYRGHSR---TIRDQIRAKQETADVL-YPA--------------TWSTEAIDAIN 234 (258)
T ss_pred ccCCCCcccchhhHHHHHHHHhCCCCCCCCCc---cHHHHHHHHhcccccc-Ccc--------------cCcHHHHHHHH
Confidence 33467889999999999999999999753221 1223333222211000 000 11234667888
Q ss_pred hcCCCCccCchhH--HHH
Q 011044 463 ECTVESPIRESTQ--RKL 478 (495)
Q Consensus 463 ~C~~~~p~~Rp~m--~~v 478 (495)
.|...+|.+||+. .|+
T Consensus 235 ~~l~~~p~~R~~~~~~~l 252 (258)
T cd05578 235 KLLERDPQKRLGDNLKDL 252 (258)
T ss_pred HHccCChhHcCCccHHHH
Confidence 9999999999999 554
No 323
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=96.16 E-value=0.0029 Score=60.73 Aligned_cols=25 Identities=20% Similarity=0.263 Sum_probs=22.1
Q ss_pred ccCCCcceeehhhhhhcccCCCCCc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.+.++|+||+||++.|++||+.|..
T Consensus 181 ~~~~~DiwslG~il~~l~~g~~pf~ 205 (303)
T cd07869 181 YSTCLDMWGVGCIFVEMIQGVAAFP 205 (303)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4567899999999999999999964
No 324
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=96.16 E-value=2.3e-05 Score=78.97 Aligned_cols=181 Identities=24% Similarity=0.254 Sum_probs=83.7
Q ss_pred CCEEeCcCCcCCccCC----ccccCCCCCcEEEccCCcccccCChhHhhcC----CCCCEEEcccccCCcc----CCccc
Q 011044 81 LQALDLSFNWFYGSIP----SSIFNMSSLLSIYFNNNTLFGELPPNFCNQM----SNLESLFLKYNMFHGK----IPSTL 148 (495)
Q Consensus 81 L~~L~L~~n~l~~~~~----~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l----~~L~~L~l~~n~l~~~----~~~~l 148 (495)
+..|.|.+|.+..... ..+.....|..|++++|.+.+.--..+...+ ..|++|.+..|.++.. +...+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 4455555555443211 2334445555555555555322222222211 2244455555554432 23334
Q ss_pred CCCCCCCEEEcccCcCcc----ccCcccc----CCCCCCEEEccCCCCCCCC----ChhhhCccc-ccEEEecCCcCCCc
Q 011044 149 SSCKQLRELSLSSNYFSG----TIPKEIG----NLTKLTRLNLRQNKLQGEI----PEELGNLAE-LEMLWLQNNSLTGT 215 (495)
Q Consensus 149 ~~l~~L~~L~l~~n~l~~----~~~~~l~----~l~~L~~L~L~~n~l~~~~----~~~l~~l~~-L~~L~l~~n~l~~~ 215 (495)
.....++.++++.|.+.. .++..+. ...++++|.+.+|.++... ...+...+. +..|++..|.+.+.
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~ 248 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDV 248 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchH
Confidence 445556666666655421 1111222 3455666666666654211 112233333 45566666665422
Q ss_pred ----CchhhhcC-CCCceeeCCCCcCCCCCC----cccccccccceeeccCcccc
Q 011044 216 ----IPSSIFSL-SSLLNLDLSLNNFTGIIP----SSIGNLSSLQKLYLSDNQLS 261 (495)
Q Consensus 216 ----~~~~l~~l-~~L~~L~Ls~n~l~~~~~----~~l~~~~~L~~L~l~~n~l~ 261 (495)
....+..+ +.+++++++.|.++.... ..+..++.++++.+.+|.+.
T Consensus 249 g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 249 GVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred HHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 12223333 455666666666654322 23344556666666666554
No 325
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=96.15 E-value=0.0068 Score=58.77 Aligned_cols=74 Identities=9% Similarity=0.148 Sum_probs=47.2
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
..+.++||||+||++.|+++|+.|... .+....+........ .+ .+ .....+.++...|
T Consensus 176 ~~~~~~DiwslG~il~ell~G~~pf~~-----~~~~~~~~~~~~~~~-~~-~~--------------~~~~~~~~li~~~ 234 (323)
T cd05584 176 GHGKAVDWWSLGALMYDMLTGAPPFTA-----ENRKKTIDKILKGKL-NL-PP--------------YLTPEARDLLKKL 234 (323)
T ss_pred CCCCcceecccHHHHHHHhcCCCCCCC-----CCHHHHHHHHHcCCC-CC-CC--------------CCCHHHHHHHHHH
Confidence 346789999999999999999999642 122233333222211 00 00 0112356788899
Q ss_pred CCCCccCch-----hHHHHH
Q 011044 465 TVESPIRES-----TQRKLL 479 (495)
Q Consensus 465 ~~~~p~~Rp-----~m~~v~ 479 (495)
...+|.+|| +..++.
T Consensus 235 l~~~p~~R~~~~~~~~~~l~ 254 (323)
T cd05584 235 LKRNPSSRLGAGPGDAAEVQ 254 (323)
T ss_pred cccCHhHcCCCCCCCHHHHh
Confidence 999999999 666653
No 326
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=96.05 E-value=0.0059 Score=59.29 Aligned_cols=79 Identities=10% Similarity=0.184 Sum_probs=48.3
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccC-CCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFN-GEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~-~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
....+.++|+|||||++.|++||+.|.+..-. .......++..........+ +.. ......++.
T Consensus 170 ~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~-------------~~~~~~~li 234 (327)
T cd05617 170 GEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRI--PRF-------------LSVKASHVL 234 (327)
T ss_pred CCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCC--CCC-------------CCHHHHHHH
Confidence 44556789999999999999999999753221 12233344433332211100 100 012245678
Q ss_pred hhcCCCCccCchhHH
Q 011044 462 MECTVESPIRESTQR 476 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~ 476 (495)
..|...+|.+|+++.
T Consensus 235 ~~~L~~dP~~R~~~~ 249 (327)
T cd05617 235 KGFLNKDPKERLGCQ 249 (327)
T ss_pred HHHhccCHHHcCCCC
Confidence 889999999999853
No 327
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=96.04 E-value=0.0053 Score=59.69 Aligned_cols=83 Identities=10% Similarity=0.139 Sum_probs=50.6
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccC-C--CCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFN-G--EMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVF 458 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~-~--~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~ 458 (495)
.....+.++|+|||||++.|++||+.|.+..-. + .....+|........... +-. .....+.
T Consensus 169 ~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~----------~~~~~~~ 233 (329)
T cd05588 169 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR-----IPR----------SLSVKAS 233 (329)
T ss_pred cCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC-----CCC----------CCCHHHH
Confidence 334556789999999999999999999763211 1 122334443333221110 000 1112356
Q ss_pred HHHhhcCCCCccCchh------HHHHH
Q 011044 459 NLAMECTVESPIREST------QRKLL 479 (495)
Q Consensus 459 ~~~~~C~~~~p~~Rp~------m~~v~ 479 (495)
++...|...+|.+||+ +.+++
T Consensus 234 ~li~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 234 SVLKGFLNKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred HHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence 7888999999999997 56663
No 328
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=96.03 E-value=0.0022 Score=61.37 Aligned_cols=93 Identities=15% Similarity=0.120 Sum_probs=49.5
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCC----cceeeeccccc---ccc----ccccchhhHH
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSIS----VMEVVDANLLS---WKD----KHFMTKEQCM 454 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~----~~~v~d~~l~~---~~~----~~~~~~~~~~ 454 (495)
.+.++|||+||+++.|+++|+.|.+.. +...-..-+....... ..++....... ... ..........
T Consensus 195 ~~~~~Di~slG~~~~el~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (302)
T cd07864 195 YGPAIDVWSCGCILGELFTKKPIFQAN--QELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIP 272 (302)
T ss_pred CCchhHHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCC
Confidence 456899999999999999999886531 1111111111111110 00110000000 000 0000001123
Q ss_pred HHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 455 SFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 455 ~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
..+.++...|...+|.+||++.+++.
T Consensus 273 ~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 273 TPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 45778899999999999999999864
No 329
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=96.02 E-value=0.0042 Score=58.80 Aligned_cols=77 Identities=8% Similarity=0.116 Sum_probs=47.3
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
.+.++|+||||+++.|++||+.|....... .. ..+....... +..+. +.....+.++...|.
T Consensus 173 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~-~~~~~~~~~~-----~~~~~----------~~~~~~~~~li~~~l 234 (279)
T cd05633 173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DK-HEIDRMTLTV-----NVELP----------DSFSPELKSLLEGLL 234 (279)
T ss_pred CCchhhhHHHHHHHHHHHhCCCCcCCCCCc--CH-HHHHHHhhcC-----CcCCc----------cccCHHHHHHHHHHh
Confidence 567899999999999999999996542211 11 1222111100 01110 011223556678899
Q ss_pred CCCccCch-----hHHHHHH
Q 011044 466 VESPIRES-----TQRKLLQ 480 (495)
Q Consensus 466 ~~~p~~Rp-----~m~~v~~ 480 (495)
..+|.+|| +++++++
T Consensus 235 ~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 235 QRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred cCCHHHhcCCCCCCHHHHHh
Confidence 99999999 5888754
No 330
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=96.02 E-value=0.0025 Score=61.51 Aligned_cols=25 Identities=20% Similarity=0.290 Sum_probs=22.3
Q ss_pred ccCCCcceeehhhhhhcccCCCCCc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.+.++||||||+++.|++||+.|..
T Consensus 193 ~~~~~DiwSlG~il~el~tg~~~f~ 217 (317)
T cd07867 193 YTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred cCcHHHHHhHHHHHHHHHhCCCCcc
Confidence 5678999999999999999998864
No 331
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=96.00 E-value=0.0059 Score=57.15 Aligned_cols=28 Identities=25% Similarity=0.419 Sum_probs=23.9
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCc
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
....+.++||||||+++.|+++|+.|..
T Consensus 183 ~~~~~~~~Dv~slG~il~el~~g~~p~~ 210 (265)
T cd06652 183 GEGYGRKADIWSVGCTVVEMLTEKPPWA 210 (265)
T ss_pred CCCCCcchhHHHHHHHHHHHhhCCCCCC
Confidence 3446778999999999999999999953
No 332
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=95.99 E-value=0.0065 Score=58.73 Aligned_cols=73 Identities=12% Similarity=0.153 Sum_probs=45.6
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++||||||+++.|++||+.|.... +-............ .+ .. .....+.++...
T Consensus 173 ~~~~~~~DiwslG~il~el~tg~~p~~~~-----~~~~~~~~i~~~~~-~~-p~--------------~~~~~~~~li~~ 231 (318)
T cd05582 173 RGHTQSADWWSFGVLMFEMLTGSLPFQGK-----DRKETMTMILKAKL-GM-PQ--------------FLSPEAQSLLRA 231 (318)
T ss_pred CCCCCccceeccceEeeeeccCCCCCCCC-----CHHHHHHHHHcCCC-CC-CC--------------CCCHHHHHHHHH
Confidence 34567899999999999999999996431 11222222222111 00 00 011225577789
Q ss_pred cCCCCccCchhHHH
Q 011044 464 CTVESPIRESTQRK 477 (495)
Q Consensus 464 C~~~~p~~Rp~m~~ 477 (495)
|.+.+|.+||++.+
T Consensus 232 ~l~~~P~~R~~a~~ 245 (318)
T cd05582 232 LFKRNPANRLGAGP 245 (318)
T ss_pred HhhcCHhHcCCCCC
Confidence 99999999999655
No 333
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=95.99 E-value=0.0055 Score=59.42 Aligned_cols=74 Identities=9% Similarity=0.104 Sum_probs=47.2
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|||||||++.|+++|+.|... .+..+..+........ ..+.+ ...+.++..
T Consensus 170 ~~~~~~~~DvwslG~il~ell~g~~pf~~-----~~~~~~~~~i~~~~~~--~~~~~--------------~~~~~~li~ 228 (323)
T cd05575 170 KQPYDRTVDWWCLGAVLYEMLYGLPPFYS-----RDTAEMYDNILNKPLR--LKPNI--------------SVSARHLLE 228 (323)
T ss_pred CCCCCccccccccchhhhhhhcCCCCCCC-----CCHHHHHHHHHcCCCC--CCCCC--------------CHHHHHHHH
Confidence 34456789999999999999999999532 2333333333322110 00111 123566788
Q ss_pred hcCCCCccCchhHHH
Q 011044 463 ECTVESPIRESTQRK 477 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~ 477 (495)
.|.+.+|.+||++.+
T Consensus 229 ~~l~~~p~~R~~~~~ 243 (323)
T cd05575 229 GLLQKDRTKRLGAKD 243 (323)
T ss_pred HHhhcCHHhCCCCCC
Confidence 899999999998853
No 334
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=95.99 E-value=0.0046 Score=59.99 Aligned_cols=78 Identities=10% Similarity=0.131 Sum_probs=48.8
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|||||||++.||++|+.|... .+..+..+....... ...+. ......++..
T Consensus 170 ~~~~~~~~DvwslG~il~el~~G~~pf~~-----~~~~~~~~~~~~~~~--~~~~~--------------~~~~~~~ll~ 228 (325)
T cd05604 170 KQPYDNTVDWWCLGAVLYEMLYGLPPFYC-----RDVAEMYDNILHKPL--VLRPG--------------ASLTAWSILE 228 (325)
T ss_pred CCCCCCcCccccccceehhhhcCCCCCCC-----CCHHHHHHHHHcCCc--cCCCC--------------CCHHHHHHHH
Confidence 44456789999999999999999999532 122233332222111 00111 1123557788
Q ss_pred hcCCCCccCchhHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQD 481 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~ 481 (495)
.|...+|.+||++++.+++
T Consensus 229 ~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 229 ELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred HHhccCHHhcCCCCCCHHH
Confidence 8999999999988754433
No 335
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=95.95 E-value=0.0086 Score=55.89 Aligned_cols=77 Identities=17% Similarity=0.137 Sum_probs=48.1
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++|+|+||+++.|+++|+.|....-. +-.++.+....... . ... .......+.++...
T Consensus 167 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~-~---~~~----------~~~~~~~~~~~i~~ 229 (262)
T cd05572 167 KGYDFSVDYWSLGILLYELLTGRPPFGEDDE---DPMEIYNDILKGNG-K---LEF----------PNYIDKAAKDLIKQ 229 (262)
T ss_pred CCCCChhhhhhhHHHHHHHHhCCCCcCCCCC---CHHHHHHHHhccCC-C---CCC----------CcccCHHHHHHHHH
Confidence 3456789999999999999999999653221 22333333221110 0 000 00112347788999
Q ss_pred cCCCCccCchhHHH
Q 011044 464 CTVESPIRESTQRK 477 (495)
Q Consensus 464 C~~~~p~~Rp~m~~ 477 (495)
|...+|.+||+|.+
T Consensus 230 ~l~~~p~~R~~~~~ 243 (262)
T cd05572 230 LLRRNPEERLGNLK 243 (262)
T ss_pred HccCChhhCcCCcc
Confidence 99999999999544
No 336
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=95.94 E-value=0.0088 Score=57.92 Aligned_cols=76 Identities=11% Similarity=0.150 Sum_probs=47.5
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++||||+||++.|++||+.|.+.. +-....+....... .-+.. .-..+.++..
T Consensus 170 ~~~~~~~~DvwslG~il~el~tg~~Pf~~~-----~~~~~~~~i~~~~~---~~p~~-------------~~~~~~~ll~ 228 (321)
T cd05591 170 ELEYGPSVDWWALGVLMYEMMAGQPPFEAD-----NEDDLFESILHDDV---LYPVW-------------LSKEAVSILK 228 (321)
T ss_pred CCCCCCccceechhHHHHHHhcCCCCCCCC-----CHHHHHHHHHcCCC---CCCCC-------------CCHHHHHHHH
Confidence 344567899999999999999999996531 22233332222111 00100 0122567788
Q ss_pred hcCCCCccCch-------hHHHHH
Q 011044 463 ECTVESPIRES-------TQRKLL 479 (495)
Q Consensus 463 ~C~~~~p~~Rp-------~m~~v~ 479 (495)
.|...+|.+|| ++.++.
T Consensus 229 ~~L~~dp~~R~~~~~~~~~~~~~~ 252 (321)
T cd05591 229 AFMTKNPNKRLGCVASQGGEDAIK 252 (321)
T ss_pred HHhccCHHHcCCCCCCCCCHHHHh
Confidence 89999999999 556653
No 337
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=95.93 E-value=0.0075 Score=58.24 Aligned_cols=75 Identities=9% Similarity=0.110 Sum_probs=46.4
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|||||||++.||++|+.|... .+-.+......... +.+-. .....+.++..
T Consensus 170 ~~~~~~~~DvwslG~il~ell~G~~Pf~~-----~~~~~~~~~i~~~~------~~~~~----------~~~~~~~~ll~ 228 (316)
T cd05592 170 GQKYNESVDWWSFGVLLYEMLIGQSPFHG-----EDEDELFDSILNDR------PHFPR----------WISKEAKDCLS 228 (316)
T ss_pred CCCCCCcccchhHHHHHHHHHhCCCCCCC-----CCHHHHHHHHHcCC------CCCCC----------CCCHHHHHHHH
Confidence 34456789999999999999999999642 12222222221111 00000 01122556778
Q ss_pred hcCCCCccCchhHHHH
Q 011044 463 ECTVESPIRESTQRKL 478 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v 478 (495)
.|...+|.+||++.+.
T Consensus 229 ~~l~~~P~~R~~~~~~ 244 (316)
T cd05592 229 KLFERDPTKRLGVDGD 244 (316)
T ss_pred HHccCCHHHcCCChHH
Confidence 9999999999998643
No 338
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=95.92 E-value=0.0018 Score=61.64 Aligned_cols=25 Identities=28% Similarity=0.311 Sum_probs=22.0
Q ss_pred ccCCCcceeehhhhhhcccCCCCCc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.+.++|+||+|+++.|+++|+.|..
T Consensus 184 ~~~~~Di~slG~~l~~l~~g~~~f~ 208 (293)
T cd07843 184 YSTAIDMWSVGCIFAELLTKKPLFP 208 (293)
T ss_pred ccchhhHHHHHHHHHHHHhCCCCCC
Confidence 4678999999999999999988753
No 339
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=95.91 E-value=0.0056 Score=57.90 Aligned_cols=77 Identities=10% Similarity=0.102 Sum_probs=47.5
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
.+.++|+||||+++.|+++|+.|.+..... ......+.... .+..+.. ..-..+.++...|.
T Consensus 173 ~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~------~~~~~~~----------~~s~~~~~li~~~l 234 (278)
T cd05606 173 YDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMTLT------MAVELPD----------SFSPELRSLLEGLL 234 (278)
T ss_pred CCcccchHhHHHHHHHHHhCCCCCCCCCcc--chHHHHHHhhc------cCCCCCC----------cCCHHHHHHHHHHh
Confidence 567899999999999999999997542111 11111111110 0111100 11233667788999
Q ss_pred CCCccCch-----hHHHHHH
Q 011044 466 VESPIRES-----TQRKLLQ 480 (495)
Q Consensus 466 ~~~p~~Rp-----~m~~v~~ 480 (495)
..+|.+|| ++.++++
T Consensus 235 ~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 235 QRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred hcCHHhccCCCCCCHHHHHh
Confidence 99999999 8888853
No 340
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=95.89 E-value=0.0026 Score=61.88 Aligned_cols=92 Identities=9% Similarity=0.042 Sum_probs=48.8
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCC----cceeeecccc---ccc-----cccccchhhH
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSIS----VMEVVDANLL---SWK-----DKHFMTKEQC 453 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~----~~~v~d~~l~---~~~-----~~~~~~~~~~ 453 (495)
.+.++|+||+|+++.|+++|+.|....- .......+...+... ...+.++... ... ..........
T Consensus 187 ~~~~~Di~slGv~l~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (332)
T cd07857 187 YTKAIDVWSVGCILAELLGRKPVFKGKD--YVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNA 264 (332)
T ss_pred CCcHHHHHHHHHHHHHHHhCCcCCCCCC--HHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCC
Confidence 5678999999999999999998854210 011111111111100 0000010000 000 0000000012
Q ss_pred HHHHHHHHhhcCCCCccCchhHHHHH
Q 011044 454 MSFVFNLAMECTVESPIRESTQRKLL 479 (495)
Q Consensus 454 ~~~~~~~~~~C~~~~p~~Rp~m~~v~ 479 (495)
-..+.++...|...+|.+||++.+++
T Consensus 265 ~~~~~~li~~~l~~~P~~R~t~~~ll 290 (332)
T cd07857 265 NPLALDLLEKLLAFDPTKRISVEEAL 290 (332)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHh
Confidence 34577899999999999999999985
No 341
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=95.88 E-value=0.0097 Score=57.67 Aligned_cols=76 Identities=9% Similarity=0.159 Sum_probs=47.1
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++||||+||++.||+||+.|.... +.....+....... .+-. .....+.++..
T Consensus 169 ~~~~~~~~DiwSlG~il~elltg~~Pf~~~-----~~~~~~~~~~~~~~------~~p~----------~~~~~~~~li~ 227 (323)
T cd05571 169 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHEKLFELILMEEI------RFPR----------TLSPEAKSLLA 227 (323)
T ss_pred CCCCCccccCcccchhhhhhhcCCCCCCCC-----CHHHHHHHHHcCCC------CCCC----------CCCHHHHHHHH
Confidence 344567899999999999999999996421 11122222111110 1100 01122567788
Q ss_pred hcCCCCccCch-----hHHHHH
Q 011044 463 ECTVESPIRES-----TQRKLL 479 (495)
Q Consensus 463 ~C~~~~p~~Rp-----~m~~v~ 479 (495)
.|...+|.+|| +..+++
T Consensus 228 ~~L~~dP~~R~~~~~~~~~~ll 249 (323)
T cd05571 228 GLLKKDPKQRLGGGPEDAKEIM 249 (323)
T ss_pred HHccCCHHHcCCCCCCCHHHHH
Confidence 99999999999 677764
No 342
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=95.86 E-value=0.004 Score=60.68 Aligned_cols=93 Identities=14% Similarity=0.094 Sum_probs=49.5
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcce----eee-ccccc---ccccc-ccchhhHHHH
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVME----VVD-ANLLS---WKDKH-FMTKEQCMSF 456 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~----v~d-~~l~~---~~~~~-~~~~~~~~~~ 456 (495)
.+.++||||+|+++.|++||+.|....- .......+.......... ..+ +.... ..... ......+...
T Consensus 211 ~~~~~Dv~slG~~l~el~tg~~p~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (335)
T PTZ00024 211 YHFAVDMWSVGCIFAELLTGKPLFPGEN--EIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDD 288 (335)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChH
Confidence 4678999999999999999998854211 111111121111110000 000 00000 00000 0000012234
Q ss_pred HHHHHhhcCCCCccCchhHHHHHH
Q 011044 457 VFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 457 ~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
+.++...|...+|.+||++.|++.
T Consensus 289 ~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 289 AIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHHcCCCchhccCHHHHhc
Confidence 678899999999999999999964
No 343
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=95.85 E-value=0.0039 Score=60.54 Aligned_cols=94 Identities=16% Similarity=0.128 Sum_probs=50.1
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcce----eeecccccc----ccccccc----hhh
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVME----VVDANLLSW----KDKHFMT----KEQ 452 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~----v~d~~l~~~----~~~~~~~----~~~ 452 (495)
..+.++|+||||+++.|+++|+.|....-. ......+.........+ ......... ....... ...
T Consensus 183 ~~~~~sDi~slG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (330)
T cd07834 183 RYTKAIDIWSVGCIFAELLTRKPLFPGRDY--IDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPG 260 (330)
T ss_pred CCCcchhHHHHHHHHHHHHcCCCCcCCCCH--HHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhccc
Confidence 467789999999999999999988542210 11111111111100000 000000000 0000000 001
Q ss_pred HHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 453 CMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 453 ~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
....+.++...|.+.+|.+||++.+++.
T Consensus 261 ~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 261 ASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 1234678999999999999999999975
No 344
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=95.81 E-value=0.0086 Score=57.97 Aligned_cols=72 Identities=13% Similarity=0.158 Sum_probs=46.3
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+|||||++.|++||+.|... .+-....+....... ..+.. ....+.++..
T Consensus 170 ~~~~~~~~DiwslG~il~el~~g~~Pf~~-----~~~~~~~~~i~~~~~---~~~~~-------------~~~~~~~li~ 228 (320)
T cd05590 170 EMLYGPSVDWWAMGVLLYEMLCGHAPFEA-----ENEDDLFEAILNDEV---VYPTW-------------LSQDAVDILK 228 (320)
T ss_pred CCCCCCccchhhhHHHHHHHhhCCCCCCC-----CCHHHHHHHHhcCCC---CCCCC-------------CCHHHHHHHH
Confidence 34456789999999999999999999642 222333333322211 01110 0122567788
Q ss_pred hcCCCCccCchhH
Q 011044 463 ECTVESPIRESTQ 475 (495)
Q Consensus 463 ~C~~~~p~~Rp~m 475 (495)
.|...+|.+||+.
T Consensus 229 ~~L~~dP~~R~~~ 241 (320)
T cd05590 229 AFMTKNPTMRLGS 241 (320)
T ss_pred HHcccCHHHCCCC
Confidence 9999999999998
No 345
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=95.81 E-value=0.0061 Score=57.88 Aligned_cols=82 Identities=15% Similarity=0.204 Sum_probs=48.8
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
.....+.++|+||||+++.|+++|+.|....... ..... ++..... .. .... ......+.++.
T Consensus 174 ~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~-~~~~~-~~~~~~~-~~----~~~~----------~~~~~~~~~li 236 (285)
T cd05630 174 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK-IKREE-VERLVKE-VQ----EEYS----------EKFSPDARSLC 236 (285)
T ss_pred cCCCCCCccccHHHHHHHHHHHhCCCCCCCCCcc-chHHH-HHhhhhh-hh----hhcC----------ccCCHHHHHHH
Confidence 3455677899999999999999999997532110 11001 1110000 00 0000 01122356778
Q ss_pred hhcCCCCccCchh-----HHHHHH
Q 011044 462 MECTVESPIREST-----QRKLLQ 480 (495)
Q Consensus 462 ~~C~~~~p~~Rp~-----m~~v~~ 480 (495)
..|...+|.+||+ +.|+.+
T Consensus 237 ~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 237 KMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HHHhhcCHHHccCCCCCchHHHHc
Confidence 8899999999999 677754
No 346
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.80 E-value=0.01 Score=57.53 Aligned_cols=78 Identities=21% Similarity=0.258 Sum_probs=49.1
Q ss_pred cCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCc--ce--eeeccccccccccccchhhHHHHHHHHHh
Q 011044 387 STNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISV--ME--VVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 387 ~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~--~~--v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
.-|+|+|||||-.+|+.+|..|.... +=.+..-..+.+.. .+ ..|..- ....-..+-+..-
T Consensus 210 dfKaDIwSfGITA~ELA~G~aPf~k~-----pPmkvLl~tLqn~pp~~~t~~~~~d~----------~k~~~ksf~e~i~ 274 (516)
T KOG0582|consen 210 DFKADIWSFGITACELAHGHAPFSKY-----PPMKVLLLTLQNDPPTLLTSGLDKDE----------DKKFSKSFREMIA 274 (516)
T ss_pred cchhhhhhhhHHHHHHhcCCCCcccC-----ChHHHHHHHhcCCCCCcccccCChHH----------hhhhcHHHHHHHH
Confidence 34799999999999999999996432 22233333343321 11 111110 0011123667778
Q ss_pred hcCCCCccCchhHHHHH
Q 011044 463 ECTVESPIRESTQRKLL 479 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~ 479 (495)
.|+..+|..||+..+.+
T Consensus 275 ~CL~kDP~kRptAskLl 291 (516)
T KOG0582|consen 275 LCLVKDPSKRPTASKLL 291 (516)
T ss_pred HHhhcCcccCCCHHHHh
Confidence 89999999999999974
No 347
>PHA03212 serine/threonine kinase US3; Provisional
Probab=95.78 E-value=0.0056 Score=61.07 Aligned_cols=26 Identities=23% Similarity=0.346 Sum_probs=22.5
Q ss_pred ccccCCCcceeehhhhhhcccCCCCC
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~ 409 (495)
...+.++|+||+||++.|++||+.|.
T Consensus 258 ~~~~~~~DiwSlGvil~elltg~~p~ 283 (391)
T PHA03212 258 DPYGPAVDIWSAGIVLFEMATCHDSL 283 (391)
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 34567899999999999999999874
No 348
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=95.76 E-value=0.0085 Score=58.29 Aligned_cols=77 Identities=16% Similarity=0.111 Sum_probs=46.0
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
.+.++|||||||++.|++||+.|.+..-. ........+...... +.+.. .....+.++...|.
T Consensus 184 ~~~~~DiwslG~il~elltg~~pf~~~~~-~~~~~~~~~~~~~~~------~~~~~----------~~~~~~~~li~~~l 246 (332)
T cd05614 184 HGKAVDWWSLGILIFELLTGASPFTLEGE-RNTQSEVSRRILKCD------PPFPS----------FIGPEAQDLLHKLL 246 (332)
T ss_pred CCCccccccchhhhhhhhcCCCCCCCCCC-CCCHHHHHHHHhcCC------CCCCC----------CCCHHHHHHHHHHc
Confidence 45689999999999999999999653211 112222222222111 11100 01122556788999
Q ss_pred CCCccCch-----hHHHHH
Q 011044 466 VESPIRES-----TQRKLL 479 (495)
Q Consensus 466 ~~~p~~Rp-----~m~~v~ 479 (495)
..+|.+|| +..+++
T Consensus 247 ~~dp~~R~~~~~~~~~~~l 265 (332)
T cd05614 247 RKDPKKRLGAGPQGASEIK 265 (332)
T ss_pred CCCHHHcCCCCCCCHHHHH
Confidence 99999999 555664
No 349
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=95.75 E-value=0.0097 Score=62.02 Aligned_cols=85 Identities=20% Similarity=0.335 Sum_probs=60.7
Q ss_pred CCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHH
Q 011044 382 REGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNL 460 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~ 460 (495)
...+.+.++|||+|||..-|++| |.+|.+..-.+ .+++.++..- ++ ...+-|...+..+
T Consensus 873 ~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~--eI~dlle~ge----------RL--------sqPpiCtiDVy~~ 932 (1177)
T KOG1025|consen 873 RIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE--EIPDLLEKGE----------RL--------SQPPICTIDVYMV 932 (1177)
T ss_pred hccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH--HhhHHHhccc----------cC--------CCCCCccHHHHHH
Confidence 34455678999999999999998 78887654332 2223322111 11 1234578889999
Q ss_pred HhhcCCCCccCchhHHHHHHHHHHHH
Q 011044 461 AMECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 461 ~~~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
...|...++..||.+++...+..+..
T Consensus 933 mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 933 MVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred HHHHhccCcccCccHHHHHHHHHHHh
Confidence 99999999999999999988776654
No 350
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=95.71 E-value=0.004 Score=58.96 Aligned_cols=25 Identities=28% Similarity=0.368 Sum_probs=21.9
Q ss_pred ccCCCcceeehhhhhhcccCCCCCc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.+.++|+|+||+++.|+++|+.|..
T Consensus 178 ~~~~~Dv~slG~~l~~l~~g~~~~~ 202 (284)
T cd07836 178 YSTSIDIWSVGCIMAEMITGRPLFP 202 (284)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4568999999999999999998853
No 351
>PHA03209 serine/threonine kinase US3; Provisional
Probab=95.66 E-value=0.0052 Score=60.53 Aligned_cols=27 Identities=19% Similarity=0.448 Sum_probs=22.1
Q ss_pred CccccCCCcceeehhhhhhcccCCCCC
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~ 409 (495)
....+.++|||||||++.|++++..|.
T Consensus 230 ~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 230 RDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred CCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 445677899999999999999976653
No 352
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=95.65 E-value=0.0093 Score=56.80 Aligned_cols=75 Identities=13% Similarity=0.099 Sum_probs=47.0
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++||||+|+++.|++||+.|... .+.....+....... .+-. ..-..+.++...
T Consensus 173 ~~~~~~~DiwSlG~il~~l~~g~~pf~~-----~~~~~~~~~i~~~~~------~~~~----------~~~~~~~~li~~ 231 (291)
T cd05612 173 KGHNKAVDWWALGILIYEMLVGYPPFFD-----DNPFGIYEKILAGKL------EFPR----------HLDLYAKDLIKK 231 (291)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCC-----CCHHHHHHHHHhCCc------CCCc----------cCCHHHHHHHHH
Confidence 3456789999999999999999999542 122223332222211 0000 001235678899
Q ss_pred cCCCCccCchh-----HHHHH
Q 011044 464 CTVESPIREST-----QRKLL 479 (495)
Q Consensus 464 C~~~~p~~Rp~-----m~~v~ 479 (495)
|...+|.+||+ ..|+.
T Consensus 232 ~l~~dp~~R~~~~~~~~~~~l 252 (291)
T cd05612 232 LLVVDRTRRLGNMKNGADDVK 252 (291)
T ss_pred HcCCCHHHccCCccCCHHHHh
Confidence 99999999995 66653
No 353
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=95.64 E-value=0.0077 Score=60.29 Aligned_cols=96 Identities=18% Similarity=0.327 Sum_probs=65.3
Q ss_pred hhhhcCCCccccCCCcceeehhhhhhcccC--CCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhH
Q 011044 376 FLWEYGREGRVSTNGDIYNFGIMIMETFTA--KKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQC 453 (495)
Q Consensus 376 ~l~~~~~~~~~~~~~dvysfgilllE~~tg--k~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~ 453 (495)
..||.-..++.++++|||.||+-+-|+++- .+|...+-.+ .+++=....++++-..++-. ....|
T Consensus 706 mawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e--~vven~~~~~~~~~~~~~l~-----------~P~~c 772 (807)
T KOG1094|consen 706 MAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE--QVVENAGEFFRDQGRQVVLS-----------RPPAC 772 (807)
T ss_pred hhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH--HHHHhhhhhcCCCCcceecc-----------CCCcC
Confidence 457888889999999999999999999864 4565433221 12222222333332221111 12257
Q ss_pred HHHHHHHHhhcCCCCccCchhHHHHHHHHHH
Q 011044 454 MSFVFNLAMECTVESPIRESTQRKLLQDSQK 484 (495)
Q Consensus 454 ~~~~~~~~~~C~~~~p~~Rp~m~~v~~~l~~ 484 (495)
...+.++.+.|-.-+..+||++.++..-|.+
T Consensus 773 p~~lyelml~Cw~~es~~RPsFe~lh~~lq~ 803 (807)
T KOG1094|consen 773 PQGLYELMLRCWRRESEQRPSFEQLHLFLQE 803 (807)
T ss_pred cHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence 7789999999999999999999999877765
No 354
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=95.64 E-value=0.011 Score=61.91 Aligned_cols=86 Identities=12% Similarity=0.099 Sum_probs=48.8
Q ss_pred ccCCCcceeehhhhhhcccCCCCCcccc--------CCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIF--------NGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~--------~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
.+.+.|||||||+++||+++.-|.+... ..+.++..|.+...+... +.+...... ........
T Consensus 356 ~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~----~d~~~~~~ 426 (566)
T PLN03225 356 LPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRAS-----PDLRRGFEV----LDLDGGAG 426 (566)
T ss_pred CCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccc-----hhhhhhhhh----ccccchHH
Confidence 4567899999999999999876654311 112344455432221110 000000000 00001123
Q ss_pred HHHHhhcCCCCccCchhHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
.++...|...+|.+||++.++++
T Consensus 427 ~dLi~~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 427 WELLKSMMRFKGRQRISAKAALA 449 (566)
T ss_pred HHHHHHHccCCcccCCCHHHHhC
Confidence 47888999999999999999954
No 355
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=95.63 E-value=0.0086 Score=60.54 Aligned_cols=78 Identities=12% Similarity=0.126 Sum_probs=48.8
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHH-H
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSF-V 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~-~ 457 (495)
|.......+..+|+||+|++|.||++|+.|....-. +..++.-++ ..... +++++ .
T Consensus 483 Evl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~-~~ei~~~i~---~~~~s-------------------~~vS~~A 539 (612)
T KOG0603|consen 483 EVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPA-GIEIHTRIQ---MPKFS-------------------ECVSDEA 539 (612)
T ss_pred hhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCc-hHHHHHhhc---CCccc-------------------cccCHHH
Confidence 333344467789999999999999999999654332 222222111 11111 11111 2
Q ss_pred HHHHhhcCCCCccCchhHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLL 479 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~ 479 (495)
-.+.-.+...+|.+||+|.++.
T Consensus 540 KdLl~~LL~~dP~~Rl~~~~i~ 561 (612)
T KOG0603|consen 540 KDLLQQLLQVDPALRLGADEIG 561 (612)
T ss_pred HHHHHHhccCChhhCcChhhhc
Confidence 2356678899999999999984
No 356
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=95.63 E-value=0.0062 Score=59.02 Aligned_cols=76 Identities=11% Similarity=0.126 Sum_probs=46.9
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVF 458 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~ 458 (495)
|.......+.++|+|||||++.|++||+.|.+.. +-....+........ ... .....+.
T Consensus 171 E~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~-----~~~~~~~~i~~~~~~--~p~--------------~~s~~~~ 229 (323)
T cd05616 171 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-----DEDELFQSIMEHNVA--YPK--------------SMSKEAV 229 (323)
T ss_pred HHhcCCCCCCccchhchhHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCC--CCC--------------cCCHHHH
Confidence 3333445678899999999999999999996432 111222221111100 000 0112356
Q ss_pred HHHhhcCCCCccCchhH
Q 011044 459 NLAMECTVESPIRESTQ 475 (495)
Q Consensus 459 ~~~~~C~~~~p~~Rp~m 475 (495)
.+...|...+|.+|++.
T Consensus 230 ~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 230 AICKGLMTKHPGKRLGC 246 (323)
T ss_pred HHHHHHcccCHHhcCCC
Confidence 78899999999999985
No 357
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=95.61 E-value=0.0092 Score=57.89 Aligned_cols=77 Identities=9% Similarity=0.088 Sum_probs=47.9
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++||||+||++.||++|+.|... .+...+.+........ ..+. ....+.++..
T Consensus 170 ~~~~~~~~DiwslG~il~el~~g~~pf~~-----~~~~~~~~~i~~~~~~--~~~~--------------~~~~~~~li~ 228 (325)
T cd05602 170 KQPYDRTVDWWCLGAVLYEMLYGLPPFYS-----RNTAEMYDNILNKPLQ--LKPN--------------ITNSARHLLE 228 (325)
T ss_pred CCCCCCccccccccHHHHHHhcCCCCCCC-----CCHHHHHHHHHhCCcC--CCCC--------------CCHHHHHHHH
Confidence 34456789999999999999999999642 1222333322221110 0111 1122556777
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|...+|.+||+..+.+.
T Consensus 229 ~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 229 GLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred HHcccCHHHCCCCCCCHH
Confidence 899999999998875443
No 358
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=95.61 E-value=0.013 Score=56.85 Aligned_cols=73 Identities=11% Similarity=0.119 Sum_probs=45.9
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++|+|||||++.|+++|+.|... .+.............. .. ......+.++...
T Consensus 176 ~~~~~~~DiwslG~il~el~~G~~pf~~-----~~~~~~~~~i~~~~~~------~p----------~~~~~~~~~li~~ 234 (324)
T cd05589 176 TSYTRAVDWWGLGVLIYEMLVGESPFPG-----DDEEEVFDSIVNDEVR------YP----------RFLSREAISIMRR 234 (324)
T ss_pred CCCCcccchhhHHHHHHHHHhCCCCCCC-----CCHHHHHHHHHhCCCC------CC----------CCCCHHHHHHHHH
Confidence 3456789999999999999999999542 1222333222221110 00 0112235678889
Q ss_pred cCCCCccCchhHHH
Q 011044 464 CTVESPIRESTQRK 477 (495)
Q Consensus 464 C~~~~p~~Rp~m~~ 477 (495)
|...+|.+||++.+
T Consensus 235 ~L~~dP~~R~~~~~ 248 (324)
T cd05589 235 LLRRNPERRLGSGE 248 (324)
T ss_pred HhhcCHhHcCCCCC
Confidence 99999999996544
No 359
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=95.61 E-value=0.0061 Score=58.91 Aligned_cols=75 Identities=13% Similarity=0.239 Sum_probs=46.2
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|||||||++.|+++|+.|.... +.....+...... +.+... . -..+.++..
T Consensus 170 ~~~~~~~~DvwslG~il~el~~G~~pf~~~-----~~~~~~~~i~~~~------~~~~~~-------~---~~~~~~li~ 228 (316)
T cd05619 170 GQKYNTSVDWWSFGVLLYEMLIGQSPFHGH-----DEEELFQSIRMDN------PCYPRW-------L---TREAKDILV 228 (316)
T ss_pred CCCCCchhhhhhHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCC------CCCCcc-------C---CHHHHHHHH
Confidence 344677899999999999999999996421 1122222111111 101000 0 112556778
Q ss_pred hcCCCCccCchhHH-HH
Q 011044 463 ECTVESPIRESTQR-KL 478 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~-~v 478 (495)
.|...+|.+||++. ++
T Consensus 229 ~~l~~~P~~R~~~~~~l 245 (316)
T cd05619 229 KLFVREPERRLGVKGDI 245 (316)
T ss_pred HHhccCHhhcCCChHHH
Confidence 89999999999997 44
No 360
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=95.60 E-value=0.0038 Score=60.29 Aligned_cols=25 Identities=20% Similarity=0.290 Sum_probs=22.3
Q ss_pred ccCCCcceeehhhhhhcccCCCCCc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.+.++|+||+||++.|++||+.|..
T Consensus 193 ~~~~~DiwslG~il~el~~g~~~f~ 217 (317)
T cd07868 193 YTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred cCchhhHHHHHHHHHHHHhCCCCcc
Confidence 4668999999999999999998864
No 361
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=95.59 E-value=0.014 Score=57.74 Aligned_cols=26 Identities=15% Similarity=0.345 Sum_probs=23.0
Q ss_pred cccCCCcceeehhhhhhcccCCCCCc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
..+.++|||||||++.|++||+.|..
T Consensus 223 ~~~~~~DiwSlGvilyelltG~~Pf~ 248 (370)
T cd05596 223 YYGRECDWWSVGVFLYEMLVGDTPFY 248 (370)
T ss_pred CCCCceeeeehhHHHHHHHhCCCCcC
Confidence 45678999999999999999999953
No 362
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=95.53 E-value=0.011 Score=57.21 Aligned_cols=73 Identities=11% Similarity=0.128 Sum_probs=46.6
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|||||||++.||++|+.|... .+...+.+....... . + .......+.++..
T Consensus 170 ~~~~~~~~DiwslG~il~el~~g~~pf~~-----~~~~~~~~~i~~~~~-~-----~----------~~~~~~~~~~li~ 228 (321)
T cd05603 170 KEPYDRTVDWWCLGAVLYEMLYGLPPFYS-----RDVSQMYDNILHKPL-Q-----L----------PGGKTVAACDLLV 228 (321)
T ss_pred CCCCCCcCcccccchhhhhhhcCCCCCCC-----CCHHHHHHHHhcCCC-C-----C----------CCCCCHHHHHHHH
Confidence 34456789999999999999999999532 233333332222110 0 0 0011223667889
Q ss_pred hcCCCCccCchhHH
Q 011044 463 ECTVESPIRESTQR 476 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~ 476 (495)
.|.+.+|.+||+..
T Consensus 229 ~~l~~~p~~R~~~~ 242 (321)
T cd05603 229 GLLHKDQRRRLGAK 242 (321)
T ss_pred HHccCCHhhcCCCC
Confidence 99999999998754
No 363
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=95.52 E-value=0.006 Score=58.68 Aligned_cols=26 Identities=19% Similarity=0.286 Sum_probs=22.6
Q ss_pred cccCCCcceeehhhhhhcccCCCCCc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
..+.++||||+|+++.|++||+.|..
T Consensus 181 ~~~~~~DiwslG~il~el~tg~~pf~ 206 (309)
T cd07872 181 EYSTQIDMWGVGCIFFEMASGRPLFP 206 (309)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 35668999999999999999998854
No 364
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=95.51 E-value=0.013 Score=56.85 Aligned_cols=76 Identities=12% Similarity=0.094 Sum_probs=46.6
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|||||||++.||+||+.|... . +-.+..+....... .+ +.. .-..+.++..
T Consensus 189 ~~~~~~~~DiwslG~il~elltg~~pf~~----~-~~~~~~~~i~~~~~-~~--p~~-------------~~~~~~~li~ 247 (329)
T PTZ00263 189 SKGHGKAVDWWTMGVLLYEFIAGYPPFFD----D-TPFRIYEKILAGRL-KF--PNW-------------FDGRARDLVK 247 (329)
T ss_pred CCCCCCcceeechHHHHHHHHcCCCCCCC----C-CHHHHHHHHhcCCc-CC--CCC-------------CCHHHHHHHH
Confidence 33456789999999999999999999532 2 11222222222111 00 000 0112557888
Q ss_pred hcCCCCccCchh-----HHHHH
Q 011044 463 ECTVESPIREST-----QRKLL 479 (495)
Q Consensus 463 ~C~~~~p~~Rp~-----m~~v~ 479 (495)
.|...+|.+||+ ..+++
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~ll 269 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADVK 269 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHHh
Confidence 999999999996 56653
No 365
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=95.47 E-value=0.0084 Score=57.64 Aligned_cols=25 Identities=20% Similarity=0.291 Sum_probs=22.0
Q ss_pred ccCCCcceeehhhhhhcccCCCCCc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.+.++||||+|+++.|+++|+.|..
T Consensus 186 ~~~~~DvwslG~il~el~~g~~~f~ 210 (309)
T cd07845 186 YTTAIDMWAVGCILAELLAHKPLLP 210 (309)
T ss_pred cCchHHHHHHHHHHHHHHhCCCCCC
Confidence 4678999999999999999998854
No 366
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=95.47 E-value=0.0058 Score=58.09 Aligned_cols=26 Identities=23% Similarity=0.277 Sum_probs=22.4
Q ss_pred cccCCCcceeehhhhhhcccCCCCCc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
..+.++|+||+||++.|++||+.|..
T Consensus 180 ~~~~~~DiwslG~~l~~l~~g~~pf~ 205 (288)
T cd07871 180 EYSTPIDMWGVGCILYEMATGRPMFP 205 (288)
T ss_pred ccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 35667999999999999999998853
No 367
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=95.47 E-value=0.017 Score=56.20 Aligned_cols=77 Identities=9% Similarity=0.191 Sum_probs=47.9
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+|||||++.|++||+.|... .+.....+....... .+.. .....+.++..
T Consensus 169 ~~~~~~~~DiwslGvil~elltG~~Pf~~-----~~~~~~~~~~~~~~~------~~p~----------~~~~~~~~li~ 227 (328)
T cd05593 169 DNDYGRAVDWWGLGVVMYEMMCGRLPFYN-----QDHEKLFELILMEDI------KFPR----------TLSADAKSLLS 227 (328)
T ss_pred CCCCCccCCccccchHHHHHhhCCCCCCC-----CCHHHHHHHhccCCc------cCCC----------CCCHHHHHHHH
Confidence 34456789999999999999999999532 122233322221110 0100 01122556777
Q ss_pred hcCCCCccCch-----hHHHHHH
Q 011044 463 ECTVESPIRES-----TQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp-----~m~~v~~ 480 (495)
.|...+|.+|| +..++++
T Consensus 228 ~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 228 GLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred HHcCCCHHHcCCCCCCCHHHHhc
Confidence 89999999997 7777753
No 368
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=95.46 E-value=0.02 Score=56.49 Aligned_cols=28 Identities=14% Similarity=0.279 Sum_probs=24.0
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCc
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
....+.++|||||||++.||++|+.|..
T Consensus 210 ~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 210 QTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred CCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 3446678999999999999999999964
No 369
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=95.46 E-value=0.0065 Score=59.07 Aligned_cols=73 Identities=8% Similarity=0.045 Sum_probs=44.2
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
.+.++||||+||++.||+||+.|... .+..+..+....... ++... .....+.++...|.
T Consensus 174 ~~~~~DvwslGvil~elltG~~Pf~~-----~~~~~~~~~i~~~~~------~~~~~---------~~~~~~~~li~~~L 233 (330)
T cd05586 174 YTKHVDFWSLGVLVFEMCCGWSPFYA-----EDTQQMYRNIAFGKV------RFPKN---------VLSDEGRQFVKGLL 233 (330)
T ss_pred CCCccceeccccEEEEeccCCCCCCC-----CCHHHHHHHHHcCCC------CCCCc---------cCCHHHHHHHHHHc
Confidence 46789999999999999999999542 122232222221110 01000 00112456778999
Q ss_pred CCCccCchhHHHH
Q 011044 466 VESPIRESTQRKL 478 (495)
Q Consensus 466 ~~~p~~Rp~m~~v 478 (495)
..+|.+||+..+.
T Consensus 234 ~~~P~~R~~~~~~ 246 (330)
T cd05586 234 NRNPQHRLGAHRD 246 (330)
T ss_pred CCCHHHCCCCCCC
Confidence 9999999965443
No 370
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=95.46 E-value=0.0056 Score=59.90 Aligned_cols=26 Identities=19% Similarity=0.305 Sum_probs=22.6
Q ss_pred cccCCCcceeehhhhhhcccCCCCCc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
..+.++||||+||++.||++|+.|..
T Consensus 192 ~~~~~~DiwslG~il~el~~g~~pf~ 217 (343)
T cd07878 192 HYNQTVDIWSVGCIMAELLKGKALFP 217 (343)
T ss_pred cCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 35678999999999999999998853
No 371
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=95.42 E-value=0.027 Score=56.02 Aligned_cols=27 Identities=15% Similarity=0.319 Sum_probs=23.5
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCc
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
...+.++|||||||++.||+||+.|..
T Consensus 223 ~~~~~~~DiwSlG~il~elltG~~Pf~ 249 (381)
T cd05626 223 KGYTQLCDWWSVGVILFEMLVGQPPFL 249 (381)
T ss_pred CCCCCccceeehhhHHHHHHhCCCCCc
Confidence 345678999999999999999999964
No 372
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=95.41 E-value=0.0072 Score=59.09 Aligned_cols=25 Identities=20% Similarity=0.248 Sum_probs=22.4
Q ss_pred ccCCCcceeehhhhhhcccCCCCCc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.+.++|+|||||++.|+++|+.|..
T Consensus 196 ~~~~~DiwSlGvil~el~~g~~pf~ 220 (342)
T cd07854 196 YTKAIDMWAAGCIFAEMLTGKPLFA 220 (342)
T ss_pred cCchhhHHHHHHHHHHHHhCCCCCC
Confidence 5668999999999999999999864
No 373
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=95.38 E-value=0.0078 Score=58.36 Aligned_cols=71 Identities=11% Similarity=0.191 Sum_probs=43.9
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++|+||+||++.|++||+.|.+.. +-..-.+....... .+.. .....+..+...
T Consensus 176 ~~~~~~~DiwslGvil~elltG~~pf~~~-----~~~~~~~~i~~~~~------~~~~----------~~~~~~~~li~~ 234 (324)
T cd05587 176 QPYGKSVDWWAFGVLLYEMLAGQPPFDGE-----DEDELFQSIMEHNV------SYPK----------SLSKEAVSICKG 234 (324)
T ss_pred CCCCcccchhhhHHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCC------CCCC----------CCCHHHHHHHHH
Confidence 34567899999999999999999996431 11111111111110 0000 011235677889
Q ss_pred cCCCCccCchhH
Q 011044 464 CTVESPIRESTQ 475 (495)
Q Consensus 464 C~~~~p~~Rp~m 475 (495)
|...+|.+|++.
T Consensus 235 ~l~~~P~~R~~~ 246 (324)
T cd05587 235 LLTKHPAKRLGC 246 (324)
T ss_pred HhhcCHHHcCCC
Confidence 999999999976
No 374
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=95.37 E-value=0.015 Score=56.35 Aligned_cols=76 Identities=11% Similarity=0.163 Sum_probs=46.4
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
.+..+.++|||||||++.|++||+.|.... +...-.+....... .+.. .....+.++..
T Consensus 169 ~~~~~~~~DiwSlGvil~ell~g~~Pf~~~-----~~~~~~~~~~~~~~------~~p~----------~~~~~~~~li~ 227 (323)
T cd05595 169 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHERLFELILMEEI------RFPR----------TLSPEAKSLLA 227 (323)
T ss_pred CCCCCchhchhhhHHHHHHHHhCCCCCCCC-----CHHHHHHHHhcCCC------CCCC----------CCCHHHHHHHH
Confidence 345677899999999999999999995321 11111111111110 0000 01122556777
Q ss_pred hcCCCCccCch-----hHHHHH
Q 011044 463 ECTVESPIRES-----TQRKLL 479 (495)
Q Consensus 463 ~C~~~~p~~Rp-----~m~~v~ 479 (495)
.|...+|.+|| +..+++
T Consensus 228 ~~L~~dP~~R~~~~~~~~~~~l 249 (323)
T cd05595 228 GLLKKDPKQRLGGGPSDAKEVM 249 (323)
T ss_pred HHccCCHHHhCCCCCCCHHHHH
Confidence 89999999998 677764
No 375
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=95.36 E-value=0.0096 Score=57.50 Aligned_cols=74 Identities=11% Similarity=0.177 Sum_probs=45.8
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++||||+||++.|+++|+.|... . +-....+...... +.+-.. .-..+.++..
T Consensus 170 ~~~~~~~~DiwslGvil~el~~g~~Pf~~----~-~~~~~~~~~~~~~------~~~~~~----------~~~~~~~li~ 228 (316)
T cd05620 170 GLKYTFSVDWWSFGVLLYEMLIGQSPFHG----D-DEDELFESIRVDT------PHYPRW----------ITKESKDILE 228 (316)
T ss_pred CCCCCcccchhhhHHHHHHHHhCCCCCCC----C-CHHHHHHHHHhCC------CCCCCC----------CCHHHHHHHH
Confidence 34566789999999999999999999642 1 2222222211110 111000 1122556778
Q ss_pred hcCCCCccCchhHHH
Q 011044 463 ECTVESPIRESTQRK 477 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~ 477 (495)
.|...+|.+||++.+
T Consensus 229 ~~l~~dP~~R~~~~~ 243 (316)
T cd05620 229 KLFERDPTRRLGVVG 243 (316)
T ss_pred HHccCCHHHcCCChH
Confidence 899999999999853
No 376
>PTZ00036 glycogen synthase kinase; Provisional
Probab=95.32 E-value=0.0092 Score=60.58 Aligned_cols=91 Identities=14% Similarity=0.178 Sum_probs=48.8
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHH--HHhCCC---cceeeeccccc----ccc-c-c-ccchhh
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVN--DLLSIS---VMEVVDANLLS----WKD-K-H-FMTKEQ 452 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~--~~~~~~---~~~v~d~~l~~----~~~-~-~-~~~~~~ 452 (495)
..+.++|||||||++.||+||+.|.. +........+ ...... ......+.... ... . . ......
T Consensus 247 ~~~~~~DiwSlGvil~elltG~~pf~----~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~ 322 (440)
T PTZ00036 247 NYTTHIDLWSLGCIIAEMILGYPIFS----GQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKG 322 (440)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCC----CCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccC
Confidence 35678999999999999999998853 2211111111 111000 00000111000 000 0 0 000001
Q ss_pred HHHHHHHHHhhcCCCCccCchhHHHHH
Q 011044 453 CMSFVFNLAMECTVESPIRESTQRKLL 479 (495)
Q Consensus 453 ~~~~~~~~~~~C~~~~p~~Rp~m~~v~ 479 (495)
....+.++...|...+|.+||+..|++
T Consensus 323 ~~~~~~~li~~~L~~dP~~R~ta~e~l 349 (440)
T PTZ00036 323 TPDDAINFISQFLKYEPLKRLNPIEAL 349 (440)
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 123477888999999999999999985
No 377
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=95.31 E-value=0.015 Score=56.37 Aligned_cols=76 Identities=9% Similarity=0.160 Sum_probs=47.4
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+|||||++.|++||+.|... .+.....+....... .+-. .....+.++..
T Consensus 170 ~~~~~~~~DiwslG~il~el~tG~~Pf~~-----~~~~~~~~~i~~~~~------~~p~----------~~~~~~~~li~ 228 (325)
T cd05594 170 DNDYGRAVDWWGLGVVMYEMMCGRLPFYN-----QDHEKLFELILMEEI------RFPR----------TLSPEAKSLLS 228 (325)
T ss_pred cCCCCCccccccccceeeeeccCCCCCCC-----CCHHHHHHHHhcCCC------CCCC----------CCCHHHHHHHH
Confidence 44567789999999999999999999632 122222222211110 0000 01122556778
Q ss_pred hcCCCCccCch-----hHHHHH
Q 011044 463 ECTVESPIRES-----TQRKLL 479 (495)
Q Consensus 463 ~C~~~~p~~Rp-----~m~~v~ 479 (495)
.|.+.+|.+|+ +..+++
T Consensus 229 ~~L~~dP~~R~~~~~~~~~~il 250 (325)
T cd05594 229 GLLKKDPKQRLGGGPDDAKEIM 250 (325)
T ss_pred HHhhcCHHHhCCCCCCCHHHHh
Confidence 89999999996 788775
No 378
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=95.21 E-value=0.012 Score=55.49 Aligned_cols=83 Identities=10% Similarity=0.095 Sum_probs=47.8
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
.+..+.++|+||+|+++.|+++|+.|....-. ........+...... ..... .....+.++..
T Consensus 168 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~------~~~~~----------~~~~~~~~li~ 230 (277)
T cd05577 168 GEVYDFSVDWFALGCTLYEMIAGRSPFRQRKE-KVEKEELKRRTLEMA------VEYPD----------KFSPEAKDLCE 230 (277)
T ss_pred CCCCCchhhhHHHHHHHHHHhhCCCCCCCCcc-cccHHHHHhcccccc------ccCCc----------cCCHHHHHHHH
Confidence 34466789999999999999999999643211 011111111111000 00000 01123567788
Q ss_pred hcCCCCccCchhHHH-HHHHH
Q 011044 463 ECTVESPIRESTQRK-LLQDS 482 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~-v~~~l 482 (495)
.|.+.+|.+||+.++ .+..+
T Consensus 231 ~~l~~~p~~R~~~~~~~~~~l 251 (277)
T cd05577 231 ALLQKDPEKRLGCRGGSADEV 251 (277)
T ss_pred HHccCChhHccCCCcccHHHH
Confidence 899999999996666 44444
No 379
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=95.19 E-value=0.0058 Score=59.83 Aligned_cols=26 Identities=23% Similarity=0.365 Sum_probs=22.8
Q ss_pred cccCCCcceeehhhhhhcccCCCCCc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
..+.++|+|++|+++.|+++|+.|..
T Consensus 192 ~~~~~~Di~slG~ll~~l~~g~~pf~ 217 (343)
T cd07880 192 HYTQTVDIWSVGCIMAEMLTGKPLFK 217 (343)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 35678999999999999999999864
No 380
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=95.12 E-value=0.016 Score=53.46 Aligned_cols=73 Identities=12% Similarity=0.120 Sum_probs=46.6
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++|+|+||+++.|+++|+.|.+.. +-....+....... .+ .. .....+.++...
T Consensus 168 ~~~~~~~D~~slG~~~~~l~~g~~p~~~~-----~~~~~~~~~~~~~~------~~-~~---------~~~~~l~~~i~~ 226 (250)
T cd05123 168 KGYGKAVDWWSLGVLLYEMLTGKPPFYAE-----DRKEIYEKILKDPL------RF-PE---------FLSPEARDLISG 226 (250)
T ss_pred CCCCchhhHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHhcCCC------CC-CC---------CCCHHHHHHHHH
Confidence 34567899999999999999999996432 11222322222110 00 00 011236678888
Q ss_pred cCCCCccCchhHHH
Q 011044 464 CTVESPIRESTQRK 477 (495)
Q Consensus 464 C~~~~p~~Rp~m~~ 477 (495)
|...+|.+||++.+
T Consensus 227 ~l~~~p~~R~~~~~ 240 (250)
T cd05123 227 LLQKDPTKRLGSGG 240 (250)
T ss_pred HhcCCHhhCCCccc
Confidence 99999999999954
No 381
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=95.11 E-value=0.036 Score=53.87 Aligned_cols=81 Identities=10% Similarity=0.215 Sum_probs=45.5
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCC-cceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSIS-VMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~-~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
..+.++|||||||++.||++|+.|... .+..+......... ...+ .+.. ....+.+..+++ .+.
T Consensus 184 ~~~~~~DiwslG~~l~el~~g~~Pf~~-----~~~~~~~~~i~~~~~~~~~-~~~~--------~~~~~~~~~li~-~ll 248 (331)
T cd05597 184 RYGPECDWWSLGVCMYEMLYGETPFYA-----ESLVETYGKIMNHKEHFQF-PPDV--------TDVSEEAKDLIR-RLI 248 (331)
T ss_pred CCCCcceeehhhhHHHHHhhCCCCCCC-----CCHHHHHHHHHcCCCcccC-CCcc--------CCCCHHHHHHHH-HHc
Confidence 456689999999999999999999532 22233333222111 0110 0000 001123333443 345
Q ss_pred cCCCCccCchhHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQ 480 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~ 480 (495)
|....+..||++.+++.
T Consensus 249 ~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 249 CSPETRLGRNGLQDFKD 265 (331)
T ss_pred cCcccccCCCCHHHHhc
Confidence 77778888999988853
No 382
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=95.00 E-value=0.048 Score=53.04 Aligned_cols=82 Identities=11% Similarity=0.172 Sum_probs=45.5
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
..+.++|||||||++.|+++|+.|... .+..+...........--..+.. . .....+..+++ .+.|
T Consensus 184 ~~~~~~DvwSlGvil~ell~g~~Pf~~-----~~~~~~~~~i~~~~~~~~~p~~~-~-------~~s~~~~~li~-~ll~ 249 (332)
T cd05623 184 KYGPECDWWSLGVCMYEMLYGETPFYA-----ESLVETYGKIMNHKERFQFPAQV-T-------DVSEDAKDLIR-RLIC 249 (332)
T ss_pred CCCCcCCEEeeHHHHHHHhcCCCCCCC-----CCHHHHHHHHhCCCccccCCCcc-c-------cCCHHHHHHHH-HHcc
Confidence 456789999999999999999999542 23333333322211000000000 0 01122333333 3447
Q ss_pred CCCCccCchhHHHHHH
Q 011044 465 TVESPIRESTQRKLLQ 480 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~~ 480 (495)
..+.+..|+++.|+.+
T Consensus 250 ~~~~r~~r~~~~~~~~ 265 (332)
T cd05623 250 SREHRLGQNGIEDFKQ 265 (332)
T ss_pred ChhhhcCCCCHHHHhC
Confidence 7777777889888853
No 383
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=94.97 E-value=0.014 Score=54.84 Aligned_cols=76 Identities=16% Similarity=0.164 Sum_probs=47.5
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+|++|+++.|+++|+.|....- . ..-.+...... ..+ .......+.++..
T Consensus 196 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~-~~~~~~~~~~~------~~~----------~~~~~~~~~~li~ 254 (280)
T cd05581 196 EKPAGKSSDLWALGCIIYQMLTGKPPFRGSN----E-YLTFQKILKLE------YSF----------PPNFPPDAKDLIE 254 (280)
T ss_pred CCCCChhhhHHHHHHHHHHHHhCCCCCCCcc----H-HHHHHHHHhcC------CCC----------CCccCHHHHHHHH
Confidence 3446778999999999999999999854311 1 01111111100 000 0011233778899
Q ss_pred hcCCCCccCchhH----HHHH
Q 011044 463 ECTVESPIRESTQ----RKLL 479 (495)
Q Consensus 463 ~C~~~~p~~Rp~m----~~v~ 479 (495)
.|...+|.+||++ .+++
T Consensus 255 ~~l~~~p~~R~~~~~~~~~ll 275 (280)
T cd05581 255 KLLVLDPQDRLGVNEGYDELK 275 (280)
T ss_pred HHhcCCHhhCCCcccCHHHHh
Confidence 9999999999999 6654
No 384
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=94.91 E-value=0.00024 Score=71.75 Aligned_cols=37 Identities=24% Similarity=0.231 Sum_probs=16.9
Q ss_pred CcEEEccCCcccccCChhHhh---cCCCCCEEEcccccCC
Q 011044 105 LLSIYFNNNTLFGELPPNFCN---QMSNLESLFLKYNMFH 141 (495)
Q Consensus 105 L~~L~l~~n~~~~~~p~~~~~---~l~~L~~L~l~~n~l~ 141 (495)
+..+.+.+|.+.......+.. ..+.|..|++++|.+.
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~ 128 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLG 128 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCc
Confidence 555666666554332222221 1344555555555544
No 385
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=94.89 E-value=0.028 Score=51.13 Aligned_cols=78 Identities=17% Similarity=0.281 Sum_probs=46.8
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
+...++|||||||-+.|+.||+-|...- .+++.-.-+ .+.+. .|.+-... . + . ....+....|
T Consensus 270 kYDiRaDVWSlGITlveLaTg~yPy~~c---~tdFe~ltk-vln~e-----PP~L~~~~-g-F--S----p~F~~fv~~C 332 (391)
T KOG0983|consen 270 KYDIRADVWSLGITLVELATGQYPYKGC---KTDFEVLTK-VLNEE-----PPLLPGHM-G-F--S----PDFQSFVKDC 332 (391)
T ss_pred ccchhhhhhhhccchhhhhcccCCCCCC---CccHHHHHH-HHhcC-----CCCCCccc-C-c--C----HHHHHHHHHH
Confidence 4456899999999999999999995321 122211111 11110 12221110 0 0 1 1245677899
Q ss_pred CCCCccCchhHHHHH
Q 011044 465 TVESPIRESTQRKLL 479 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~ 479 (495)
...++.+||...+.+
T Consensus 333 L~kd~r~RP~Y~~Ll 347 (391)
T KOG0983|consen 333 LTKDHRKRPKYNKLL 347 (391)
T ss_pred hhcCcccCcchHHHh
Confidence 999999999998874
No 386
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=94.72 E-value=0.024 Score=54.87 Aligned_cols=73 Identities=10% Similarity=0.150 Sum_probs=45.7
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
....+.++|+|||||++.|++||+.|.... +-...++........ -+. .......++..
T Consensus 175 ~~~~~~~~DiwslGvil~elltG~~pf~~~-----~~~~~~~~i~~~~~~---~p~-------------~~~~~~~~li~ 233 (323)
T cd05615 175 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGE-----DEDELFQSIMEHNVS---YPK-------------SLSKEAVSICK 233 (323)
T ss_pred CCCCCCccchhhhHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCC---CCc-------------cCCHHHHHHHH
Confidence 344677899999999999999999996532 112222222221110 000 01123567788
Q ss_pred hcCCCCccCchhHH
Q 011044 463 ECTVESPIRESTQR 476 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~ 476 (495)
.|...+|.+|++..
T Consensus 234 ~~l~~~p~~R~~~~ 247 (323)
T cd05615 234 GLMTKHPSKRLGCG 247 (323)
T ss_pred HHcccCHhhCCCCC
Confidence 89999999999853
No 387
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=94.56 E-value=0.014 Score=31.22 Aligned_cols=12 Identities=50% Similarity=0.376 Sum_probs=5.6
Q ss_pred CCEEeCcCCcCC
Q 011044 81 LQALDLSFNWFY 92 (495)
Q Consensus 81 L~~L~L~~n~l~ 92 (495)
|++|+|++|.++
T Consensus 2 L~~Ldls~n~l~ 13 (22)
T PF00560_consen 2 LEYLDLSGNNLT 13 (22)
T ss_dssp ESEEEETSSEES
T ss_pred ccEEECCCCcCE
Confidence 444444444444
No 388
>PHA03211 serine/threonine kinase US3; Provisional
Probab=94.44 E-value=0.028 Score=57.21 Aligned_cols=28 Identities=18% Similarity=0.285 Sum_probs=22.9
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCC
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~ 409 (495)
.....+.++|||||||++.|+++|..|.
T Consensus 335 ~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 335 AGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 3445677899999999999999987653
No 389
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=94.36 E-value=0.052 Score=53.73 Aligned_cols=26 Identities=15% Similarity=0.345 Sum_probs=23.1
Q ss_pred cccCCCcceeehhhhhhcccCCCCCc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
..+.++|+||+||++.||++|+.|..
T Consensus 223 ~~~~~~DiwSlGvilyell~G~~Pf~ 248 (371)
T cd05622 223 YYGRECDWWSVGVFLYEMLVGDTPFY 248 (371)
T ss_pred cCCCccceeehhHHHHHHHhCCCCCC
Confidence 35678999999999999999999964
No 390
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=94.36 E-value=0.044 Score=53.54 Aligned_cols=75 Identities=12% Similarity=0.049 Sum_probs=45.0
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++|+|||||++.||+||+.|... .... .-.+....... . .... . ...+..+...
T Consensus 203 ~~~~~~~DiwSlGvil~ell~G~~Pf~~----~~~~-~~~~~i~~~~~-~-~p~~-----------~---~~~~~~li~~ 261 (340)
T PTZ00426 203 VGHGKAADWWTLGIFIYEILVGCPPFYA----NEPL-LIYQKILEGII-Y-FPKF-----------L---DNNCKHLMKK 261 (340)
T ss_pred CCCCccccccchhhHHHHHhcCCCCCCC----CCHH-HHHHHHhcCCC-C-CCCC-----------C---CHHHHHHHHH
Confidence 3456789999999999999999999642 2111 11111111110 0 0000 0 1124567789
Q ss_pred cCCCCccCch-----hHHHHH
Q 011044 464 CTVESPIRES-----TQRKLL 479 (495)
Q Consensus 464 C~~~~p~~Rp-----~m~~v~ 479 (495)
|...+|.+|+ +..++.
T Consensus 262 ~l~~dp~~R~~~~~~~~~~~~ 282 (340)
T PTZ00426 262 LLSHDLTKRYGNLKKGAQNVK 282 (340)
T ss_pred HcccCHHHcCCCCCCCHHHHH
Confidence 9999999995 677764
No 391
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=94.34 E-value=0.016 Score=53.28 Aligned_cols=70 Identities=13% Similarity=0.092 Sum_probs=43.2
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++|+||+|+++.|+++|+.|.+..... ........+-. .....+.++...
T Consensus 157 ~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------------~~~~~~~~~~~----------~~~~~~~~li~~ 211 (237)
T cd05576 157 SEETEACDWWSLGAILFELLTGKTLVECHPSG---------------INTHTTLNIPE----------WVSEEARSLLQQ 211 (237)
T ss_pred CCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------------cccccccCCcc----------cCCHHHHHHHHH
Confidence 34567899999999999999998764321100 00000000100 011235567888
Q ss_pred cCCCCccCchhHHHH
Q 011044 464 CTVESPIRESTQRKL 478 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v 478 (495)
|...+|.+||+++++
T Consensus 212 ~l~~dp~~R~~~~~~ 226 (237)
T cd05576 212 LLQFNPTERLGAGVA 226 (237)
T ss_pred HccCCHHHhcCCCcc
Confidence 999999999998655
No 392
>PHA03210 serine/threonine kinase US3; Provisional
Probab=94.33 E-value=0.023 Score=58.70 Aligned_cols=26 Identities=12% Similarity=0.291 Sum_probs=21.7
Q ss_pred CccccCCCcceeehhhhhhcccCCCC
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKP 408 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p 408 (495)
....+.++|||||||+++||++|+.+
T Consensus 342 ~~~~~~~~DiwSlGvil~ell~~~~~ 367 (501)
T PHA03210 342 GDGYCEITDIWSCGLILLDMLSHDFC 367 (501)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 34567789999999999999998753
No 393
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=94.33 E-value=0.039 Score=54.73 Aligned_cols=28 Identities=14% Similarity=0.291 Sum_probs=24.0
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCc
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
....+.++|||||||++.||+||+.|..
T Consensus 218 ~~~~~~~~DiwSlGvilyell~G~~Pf~ 245 (376)
T cd05598 218 RTGYTQLCDWWSVGVILYEMLVGQPPFL 245 (376)
T ss_pred CCCCCcceeeeeccceeeehhhCCCCCC
Confidence 3445678999999999999999999964
No 394
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=94.27 E-value=0.067 Score=52.96 Aligned_cols=26 Identities=15% Similarity=0.368 Sum_probs=23.0
Q ss_pred cccCCCcceeehhhhhhcccCCCCCc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
..+.++|+||+||++.||+||+.|..
T Consensus 223 ~~~~~~DiwSlG~ilyell~G~~Pf~ 248 (370)
T cd05621 223 YYGRECDWWSVGVFLFEMLVGDTPFY 248 (370)
T ss_pred CCCcccCEEeehHHHHHHHhCCCCCC
Confidence 35678999999999999999999953
No 395
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.23 E-value=0.044 Score=54.78 Aligned_cols=78 Identities=19% Similarity=0.253 Sum_probs=49.3
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHH-HHHHHh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSF-VFNLAM 462 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~-~~~~~~ 462 (495)
..-..|.||||+|||.+||+-|..|.-. +-++......+.. +..++-.+. .+.. +-+...
T Consensus 444 k~YG~KVDIWSLGIMaIEMveGEPPYln----E~PlrAlyLIa~n-g~P~lk~~~--------------klS~~~kdFL~ 504 (550)
T KOG0578|consen 444 KPYGPKVDIWSLGIMAIEMVEGEPPYLN----ENPLRALYLIATN-GTPKLKNPE--------------KLSPELKDFLD 504 (550)
T ss_pred cccCccccchhhhhHHHHHhcCCCCccC----CChHHHHHHHhhc-CCCCcCCcc--------------ccCHHHHHHHH
Confidence 3345789999999999999999999532 3343332221111 111221221 1222 335678
Q ss_pred hcCCCCccCchhHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~ 480 (495)
.|..-++.+||+..|.++
T Consensus 505 ~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 505 RCLVVDVEQRASAKELLE 522 (550)
T ss_pred HHhhcchhcCCCHHHHhc
Confidence 899999999999999853
No 396
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.10 E-value=0.03 Score=57.45 Aligned_cols=74 Identities=22% Similarity=0.398 Sum_probs=45.9
Q ss_pred CCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHH-HHHHHhhcCC
Q 011044 388 TNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSF-VFNLAMECTV 466 (495)
Q Consensus 388 ~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~-~~~~~~~C~~ 466 (495)
..+|+|||||-..||.|||.|.-+.-. + +-+ +++-+.- -+.|.+ ++++.. .-...+.|-.
T Consensus 757 ~aADIWS~GCT~vEMATGrPPF~Elgs---p--qAA--MFkVGmy-KvHP~i-----------Peelsaeak~FilrcFe 817 (1226)
T KOG4279|consen 757 KAADIWSFGCTMVEMATGRPPFVELGS---P--QAA--MFKVGMY-KVHPPI-----------PEELSAEAKNFILRCFE 817 (1226)
T ss_pred chhhhhhccceeEeeccCCCCeeecCC---h--hHh--hhhhcce-ecCCCC-----------cHHHHHHHHHHHHHHcC
Confidence 458999999999999999999654211 1 000 1111100 012222 122222 3356789999
Q ss_pred CCccCchhHHHHHH
Q 011044 467 ESPIRESTQRKLLQ 480 (495)
Q Consensus 467 ~~p~~Rp~m~~v~~ 480 (495)
.+|.+||+..+.++
T Consensus 818 pd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 818 PDPCDRPSAKDLLQ 831 (1226)
T ss_pred CCcccCccHHHhcc
Confidence 99999999999854
No 397
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=94.10 E-value=0.029 Score=53.35 Aligned_cols=37 Identities=16% Similarity=0.110 Sum_probs=28.0
Q ss_pred hhhhhhhhcCCCccccCCCcceeehhhhhhcccCCCC
Q 011044 372 LEELFLWEYGREGRVSTNGDIYNFGIMIMETFTAKKP 408 (495)
Q Consensus 372 L~~L~l~~~~~~~~~~~~~dvysfgilllE~~tgk~p 408 (495)
-+....+|--.+--.++++||||+||+|.|++||..-
T Consensus 272 TRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~L 308 (415)
T KOG0671|consen 272 TRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETL 308 (415)
T ss_pred ccccCCchheeccCcCCccCceeeeeEEEEeecccee
Confidence 3444555554555578899999999999999999763
No 398
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=94.09 E-value=0.06 Score=53.07 Aligned_cols=29 Identities=14% Similarity=0.296 Sum_probs=24.6
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCc
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.....+.++|+|||||++.||++|+.|..
T Consensus 212 ~~~~~~~~~DiwSlG~il~el~~G~~Pf~ 240 (364)
T cd05599 212 LQTGYNKECDWWSLGVIMYEMLVGYPPFC 240 (364)
T ss_pred cCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence 34456778999999999999999999964
No 399
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=94.05 E-value=0.05 Score=51.60 Aligned_cols=71 Identities=10% Similarity=0.177 Sum_probs=43.7
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
.+.++|||+||+++.|++||+.|.+.. ........+.+...... +.. .......+..+...|.
T Consensus 185 ~~~~~Dv~slG~~l~~ll~g~~p~~~~-~~~~~~~~~~~~~~~~~------~~~----------~~~~~~~~~~ll~~~l 247 (290)
T cd05613 185 HDKAVDWWSMGVLMYELLTGASPFTVD-GEKNSQAEISRRILKSE------PPY----------PQEMSALAKDIIQRLL 247 (290)
T ss_pred CCccccHHHHHHHHHHHhcCCCCCCcC-CccccHHHHHHHhhccC------CCC----------CccCCHHHHHHHHHHh
Confidence 456799999999999999999996421 11123333333222211 000 0011223667889999
Q ss_pred CCCccCch
Q 011044 466 VESPIRES 473 (495)
Q Consensus 466 ~~~p~~Rp 473 (495)
..+|.+||
T Consensus 248 ~~~p~~R~ 255 (290)
T cd05613 248 MKDPKKRL 255 (290)
T ss_pred cCCHHHhc
Confidence 99999997
No 400
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=94.02 E-value=0.061 Score=50.22 Aligned_cols=28 Identities=18% Similarity=0.336 Sum_probs=24.1
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCc
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
....+.++|+||||+++.|+++|+.|..
T Consensus 183 ~~~~~~~~Di~slG~il~~l~~g~~p~~ 210 (264)
T cd06653 183 GEGYGRKADVWSVACTVVEMLTEKPPWA 210 (264)
T ss_pred CCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 3456778999999999999999999954
No 401
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=94.02 E-value=0.03 Score=54.86 Aligned_cols=25 Identities=20% Similarity=0.359 Sum_probs=22.0
Q ss_pred cccCCCcceeehhhhhhcccCCCCC
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~ 409 (495)
..+.++||||||+++.|+++|+.|.
T Consensus 194 ~~~~~~DvwslG~il~el~~g~~pf 218 (345)
T cd07877 194 HYNQTVDIWSVGCIMAELLTGRTLF 218 (345)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCC
Confidence 3566899999999999999999885
No 402
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=93.87 E-value=0.065 Score=49.07 Aligned_cols=77 Identities=19% Similarity=0.325 Sum_probs=50.1
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
-+.|+||||.||++.||..=+.| |.|. ++....++.-.... +.+ ..+..-..+.+++-.|.
T Consensus 205 Y~~kSDiWslGCllyEMcaL~~P----F~g~-n~~~L~~KI~qgd~-----~~~---------p~~~YS~~l~~li~~ci 265 (375)
T KOG0591|consen 205 YNFKSDIWSLGCLLYEMCALQSP----FYGD-NLLSLCKKIEQGDY-----PPL---------PDEHYSTDLRELINMCI 265 (375)
T ss_pred CCcchhHHHHHHHHHHHHhcCCC----cccc-cHHHHHHHHHcCCC-----CCC---------cHHHhhhHHHHHHHHHc
Confidence 45689999999999999988888 4443 44443332222111 111 22334455888999999
Q ss_pred CCCccCchhHHHHHHH
Q 011044 466 VESPIRESTQRKLLQD 481 (495)
Q Consensus 466 ~~~p~~Rp~m~~v~~~ 481 (495)
+.+|..||+.-..|+.
T Consensus 266 ~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 266 AVDPEQRPDTVPYVQD 281 (375)
T ss_pred cCCcccCCCcchHHHH
Confidence 9999999985444433
No 403
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.83 E-value=0.062 Score=52.12 Aligned_cols=70 Identities=19% Similarity=0.338 Sum_probs=46.5
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceee----eccccccccccccchhhHHHHHHHHH
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVV----DANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~----d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
-..|+|+||+||...||.+|..|.-.... -+.+-++ -|.+.. ++-..+-+..
T Consensus 188 Y~~KADIWSLGITaiEla~GePP~s~~hP--------------mrvlflIpk~~PP~L~~----------~~S~~~kEFV 243 (467)
T KOG0201|consen 188 YDTKADIWSLGITAIELAKGEPPHSKLHP--------------MRVLFLIPKSAPPRLDG----------DFSPPFKEFV 243 (467)
T ss_pred ccchhhhhhhhHHHHHHhcCCCCCcccCc--------------ceEEEeccCCCCCcccc----------ccCHHHHHHH
Confidence 46789999999999999999999643322 1111111 122211 1122245567
Q ss_pred hhcCCCCccCchhHHHHH
Q 011044 462 MECTVESPIRESTQRKLL 479 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~ 479 (495)
-.|...+|..||+..+.+
T Consensus 244 ~~CL~k~P~~RpsA~~LL 261 (467)
T KOG0201|consen 244 EACLDKNPEFRPSAKELL 261 (467)
T ss_pred HHHhhcCcccCcCHHHHh
Confidence 789999999999999985
No 404
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=93.53 E-value=0.11 Score=54.80 Aligned_cols=82 Identities=12% Similarity=0.175 Sum_probs=58.8
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
..-+.+|+|+|..||+|..++-..-|.+. + +...|++.+..= .....+-..+-.+..
T Consensus 232 g~pI~eKsDIWALGclLYkLCy~t~PFe~----s-------------g~laIlng~Y~~------P~~p~ys~~l~~LI~ 288 (738)
T KOG1989|consen 232 GLPIGEKSDIWALGCLLYKLCYFTTPFEE----S-------------GKLAILNGNYSF------PPFPNYSDRLKDLIR 288 (738)
T ss_pred CCCCcchhHHHHHHHHHHHHHHhCCCcCc----C-------------cceeEEeccccC------CCCccHHHHHHHHHH
Confidence 34578899999999999999988888442 1 123444444320 011123445777899
Q ss_pred hcCCCCccCchhHHHHHHHHHHHHH
Q 011044 463 ECTVESPIRESTQRKLLQDSQKLET 487 (495)
Q Consensus 463 ~C~~~~p~~Rp~m~~v~~~l~~i~~ 487 (495)
.|.+++|.+||+.-+|+..+-+++.
T Consensus 289 ~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 289 TMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred HHhccCcccCCCHHHHHHHHHHHhc
Confidence 9999999999999999998887764
No 405
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=93.49 E-value=0.091 Score=51.72 Aligned_cols=28 Identities=14% Similarity=0.279 Sum_probs=23.8
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCc
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
....+.++|+|||||++.||+||+.|..
T Consensus 210 ~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 210 QTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred CCCCCCcceeccccceeeecccCCCCCC
Confidence 3445678999999999999999999954
No 406
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=93.41 E-value=0.17 Score=49.18 Aligned_cols=26 Identities=15% Similarity=0.379 Sum_probs=23.0
Q ss_pred cccCCCcceeehhhhhhcccCCCCCc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
..+.++|+||||+++.||+||+.|..
T Consensus 184 ~~~~~~DiwSlGvil~ell~g~~Pf~ 209 (331)
T cd05624 184 KYGPECDWWSLGVCMYEMLYGETPFY 209 (331)
T ss_pred CCCCcccEEeeehhhhhhhhCCCCcc
Confidence 45678999999999999999999964
No 407
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=93.24 E-value=0.085 Score=50.08 Aligned_cols=69 Identities=14% Similarity=0.087 Sum_probs=41.7
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
...+.++|+||||+++.|+++|+.|.... .. ..-.+....... .+... .-..+.++...
T Consensus 173 ~~~~~~~Di~slG~il~~l~~g~~p~~~~----~~-~~~~~~~~~~~~------~~~~~----------~~~~l~~li~~ 231 (290)
T cd05580 173 KGYGKAVDWWALGILIYEMLAGYPPFFDD----NP-IQIYEKILEGKV------RFPSF----------FSPDAKDLIRN 231 (290)
T ss_pred CCCCccccHHHHHHHHHHHHhCCCCCCCC----CH-HHHHHHHhcCCc------cCCcc----------CCHHHHHHHHH
Confidence 34567899999999999999999995421 11 111111111110 00000 01235577888
Q ss_pred cCCCCccCch
Q 011044 464 CTVESPIRES 473 (495)
Q Consensus 464 C~~~~p~~Rp 473 (495)
|...+|.+||
T Consensus 232 ~l~~~p~~R~ 241 (290)
T cd05580 232 LLQVDLTKRL 241 (290)
T ss_pred HccCCHHHcc
Confidence 9999999998
No 408
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=93.20 E-value=0.14 Score=50.72 Aligned_cols=29 Identities=14% Similarity=0.244 Sum_probs=24.4
Q ss_pred CCccccCCCcceeehhhhhhcccCCCCCc
Q 011044 382 REGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 382 ~~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.....+.++|+|||||++.|++||+.|..
T Consensus 221 ~~~~~~~~~DiwSlGvil~elltG~~Pf~ 249 (377)
T cd05629 221 LQQGYGQECDWWSLGAIMFECLIGWPPFC 249 (377)
T ss_pred ccCCCCCceeeEecchhhhhhhcCCCCCC
Confidence 34456778999999999999999999953
No 409
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=92.99 E-value=0.11 Score=51.12 Aligned_cols=73 Identities=14% Similarity=0.200 Sum_probs=48.1
Q ss_pred cCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcCC
Q 011044 387 STNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECTV 466 (495)
Q Consensus 387 ~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~ 466 (495)
..++||||+||+|..|++|+-|.+. .+.+.-.+....... .=|.... -.....+...|..
T Consensus 201 g~~aDvWS~GViLy~ml~G~~PF~d-----~~~~~l~~ki~~~~~---~~p~~~~------------S~~~~~Li~~mL~ 260 (370)
T KOG0583|consen 201 GKAADVWSLGVILYVLLCGRLPFDD-----SNVPNLYRKIRKGEF---KIPSYLL------------SPEARSLIEKMLV 260 (370)
T ss_pred CchhhhhhhHHHHHHHHhCCCCCCC-----ccHHHHHHHHhcCCc---cCCCCcC------------CHHHHHHHHHHcC
Confidence 4579999999999999999999764 233333332222110 0011100 1225678889999
Q ss_pred CCccCchhHHHHH
Q 011044 467 ESPIRESTQRKLL 479 (495)
Q Consensus 467 ~~p~~Rp~m~~v~ 479 (495)
.+|..|+++.++.
T Consensus 261 ~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 261 PDPSTRITLLEIL 273 (370)
T ss_pred CCcccCCCHHHHh
Confidence 9999999999996
No 410
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=92.92 E-value=0.072 Score=58.66 Aligned_cols=23 Identities=35% Similarity=0.666 Sum_probs=21.3
Q ss_pred CCcceeehhhhhhcccCCCCCcc
Q 011044 389 NGDIYNFGIMIMETFTAKKPTDE 411 (495)
Q Consensus 389 ~~dvysfgilllE~~tgk~p~~~ 411 (495)
..||||.||+++||.|||+|+-+
T Consensus 1421 A~DiWslGCVVlEM~tGkrPW~~ 1443 (1509)
T KOG4645|consen 1421 AADIWSLGCVVLEMATGKRPWAE 1443 (1509)
T ss_pred chhhhcccceEEEeecCCCchhh
Confidence 57999999999999999999865
No 411
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=92.83 E-value=0.12 Score=51.25 Aligned_cols=28 Identities=14% Similarity=0.291 Sum_probs=23.9
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCc
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
....+.++||||+||++.||+||+.|..
T Consensus 222 ~~~~~~~~DiwSlGvil~elltG~~Pf~ 249 (382)
T cd05625 222 RTGYTQLCDWWSVGVILYEMLVGQPPFL 249 (382)
T ss_pred CCCCCCeeeEEechHHHHHHHhCCCCCC
Confidence 3345678999999999999999999964
No 412
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=92.65 E-value=0.07 Score=48.48 Aligned_cols=80 Identities=15% Similarity=0.209 Sum_probs=49.9
Q ss_pred CCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcCCC
Q 011044 388 TNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECTVE 467 (495)
Q Consensus 388 ~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 467 (495)
..+|.|||.|++-|+.|...|..+.- +..-=++-++ ++..--+.|.+ ..-+.++.-.|..+
T Consensus 368 raadmwsfaillwel~trevpfadls----pmecgmkial-eglrv~ippgi--------------s~hm~klm~icmne 428 (448)
T KOG0195|consen 368 RAADMWSFAILLWELNTREVPFADLS----PMECGMKIAL-EGLRVHIPPGI--------------SRHMNKLMNICMNE 428 (448)
T ss_pred hhhhHHHHHHHHHHhhccccccccCC----chhhhhhhhh-ccccccCCCCc--------------cHHHHHHHHHHhcC
Confidence 46899999999999999988843211 1000001111 11111112222 11266778889999
Q ss_pred CccCchhHHHHHHHHHHHH
Q 011044 468 SPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 468 ~p~~Rp~m~~v~~~l~~i~ 486 (495)
+|.+||.+..||-.|+++.
T Consensus 429 dpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 429 DPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred CCCcCCCcceehhhHHHhc
Confidence 9999999999998888653
No 413
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=92.42 E-value=0.035 Score=56.19 Aligned_cols=72 Identities=21% Similarity=0.312 Sum_probs=49.1
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCC----cceeeeccccccccccccchhhHHHHHHHHH
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSIS----VMEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~----~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
..+..|||+||+=+|||+|+.-|..+ =.+-.+.-|+..++. ..-|-||. +-++.
T Consensus 220 YnE~VDVYaFGMCmLEMvT~eYPYsE----C~n~AQIYKKV~SGiKP~sl~kV~dPe------------------vr~fI 277 (632)
T KOG0584|consen 220 YNELVDVYAFGMCMLEMVTSEYPYSE----CTNPAQIYKKVTSGIKPAALSKVKDPE------------------VREFI 277 (632)
T ss_pred cchhhhhhhhhHHHHHHHhccCChhh----hCCHHHHHHHHHcCCCHHHhhccCCHH------------------HHHHH
Confidence 34678999999999999999999643 223334444444332 22333332 55678
Q ss_pred hhcCCCCccCchhHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~ 480 (495)
..|... ..+||+..|.++
T Consensus 278 ekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 278 EKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHhcC-chhccCHHHHhh
Confidence 889988 889999998753
No 414
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=91.94 E-value=0.22 Score=51.12 Aligned_cols=33 Identities=21% Similarity=0.477 Sum_probs=25.5
Q ss_pred CCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHH
Q 011044 388 TNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVND 425 (495)
Q Consensus 388 ~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~ 425 (495)
.++||||+||+|.-++||+-|.| +.++.....+
T Consensus 191 ~~sDVWSCGVILfALLtG~LPFd-----DdNir~LLlK 223 (786)
T KOG0588|consen 191 RPSDVWSCGVILFALLTGKLPFD-----DDNIRVLLLK 223 (786)
T ss_pred CccccchhHHHHHHHHhCCCCCC-----CccHHHHHHH
Confidence 36899999999999999999965 3355554443
No 415
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=90.78 E-value=0.096 Score=47.62 Aligned_cols=79 Identities=13% Similarity=0.214 Sum_probs=47.3
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
-..++||||+||-+.|+.||+-|.+.- . ++-+-+.....+ |+.++.... ...+.-..+....-.|+
T Consensus 246 yDiRSDvWSLGITL~EvAtG~fPyr~w-~---svfeql~~Vv~g------dpp~l~~~~----~~~~~s~~~~~fintCl 311 (361)
T KOG1006|consen 246 YDIRSDVWSLGITLYEVATGNFPYRKW-D---SVFEQLCQVVIG------DPPILLFDK----ECVHYSFSMVRFINTCL 311 (361)
T ss_pred cchhhhhhhhcceEeeeecCCCCcchH-H---HHHHHHHHHHcC------CCCeecCcc----cccccCHHHHHHHHHHh
Confidence 346799999999999999999997531 1 111222222211 222221100 00111233566677899
Q ss_pred CCCccCchhHHHH
Q 011044 466 VESPIRESTQRKL 478 (495)
Q Consensus 466 ~~~p~~Rp~m~~v 478 (495)
-.+..+||...+.
T Consensus 312 ~Kd~~~Rpky~~L 324 (361)
T KOG1006|consen 312 IKDRSDRPKYDDL 324 (361)
T ss_pred hcccccCcchhhh
Confidence 9999999999886
No 416
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=90.71 E-value=0.11 Score=45.86 Aligned_cols=25 Identities=12% Similarity=0.320 Sum_probs=21.5
Q ss_pred HHHHHhhcCCCCccCchhHHHHHHH
Q 011044 457 VFNLAMECTVESPIRESTQRKLLQD 481 (495)
Q Consensus 457 ~~~~~~~C~~~~p~~Rp~m~~v~~~ 481 (495)
+.++...|...+|.+||++.++++.
T Consensus 190 ~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 190 LKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHhhCCcccCcCHHHHhhC
Confidence 6677888999999999999998753
No 417
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=90.58 E-value=0.13 Score=52.44 Aligned_cols=83 Identities=16% Similarity=0.054 Sum_probs=47.2
Q ss_pred CCCcCCEEeCcCCccccc--CCcCccCCCCCcEEEccCCcCceecCCCCCCCCCChhhhhhhhcCCCccccCCCcceeeh
Q 011044 319 NLRKLEWLMLSHNKLVGV--VPAPIFNLSTLISLQLHNNSLSGSLPSSADVPLPNLEELFLWEYGREGRVSTNGDIYNFG 396 (495)
Q Consensus 319 ~l~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~dvysfg 396 (495)
.+.-|..+.|-||.++-+ +... ..-..++.+|+..-...+.-.-. .. +-+....+|--.+....++.|+||+|
T Consensus 301 ~L~~L~~l~IIHcDLKPENILL~~-~~r~~vKVIDFGSSc~~~q~vyt---Yi-QSRfYRAPEVILGlpY~~~IDmWSLG 375 (586)
T KOG0667|consen 301 ALLFLHELGIIHCDLKPENILLKD-PKRSRIKVIDFGSSCFESQRVYT---YI-QSRFYRAPEVILGLPYDTAIDMWSLG 375 (586)
T ss_pred HHHHHHhCCeeeccCChhheeecc-CCcCceeEEecccccccCCccee---ee-eccccccchhhccCCCCCccceeehh
Confidence 445566666777765421 1001 11235666666443222111000 00 12345556666777888999999999
Q ss_pred hhhhhcccCC
Q 011044 397 IMIMETFTAK 406 (495)
Q Consensus 397 illlE~~tgk 406 (495)
|++-||+||.
T Consensus 376 CIlAEL~tG~ 385 (586)
T KOG0667|consen 376 CILAELFTGE 385 (586)
T ss_pred hhHHhHhcCc
Confidence 9999999994
No 418
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=90.54 E-value=0.17 Score=25.11 Aligned_cols=12 Identities=50% Similarity=0.639 Sum_probs=4.4
Q ss_pred CCCEEeCcCCcC
Q 011044 80 SLQALDLSFNWF 91 (495)
Q Consensus 80 ~L~~L~L~~n~l 91 (495)
+|++|+|++|++
T Consensus 2 ~L~~L~l~~n~L 13 (17)
T PF13504_consen 2 NLRTLDLSNNRL 13 (17)
T ss_dssp T-SEEEETSS--
T ss_pred ccCEEECCCCCC
Confidence 344455544444
No 419
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=90.41 E-value=0.26 Score=50.28 Aligned_cols=88 Identities=17% Similarity=0.316 Sum_probs=59.8
Q ss_pred hcCCCccccCCCcceeehhhhhhccc-CCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHH
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFT-AKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFV 457 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~t-gk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~ 457 (495)
|--...+.++.+|||-|||-.-|+++ |.+|... |+.. +|+- .+ ++.+ .-.-.+.|...+
T Consensus 562 ESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg-----------vkNs------DVI~-~i-EnGe-RlP~P~nCPp~L 621 (974)
T KOG4257|consen 562 ESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG-----------VKNS------DVIG-HI-ENGE-RLPCPPNCPPAL 621 (974)
T ss_pred cccchhcccchhhHHHHHHHHHHHHHhcCCcccc-----------cccc------ceEE-Ee-cCCC-CCCCCCCCChHH
Confidence 33345678889999999999999885 7888432 2110 1100 00 0000 011234688888
Q ss_pred HHHHhhcCCCCccCchhHHHHHHHHHHHH
Q 011044 458 FNLAMECTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 458 ~~~~~~C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
..+--.|.+-.|.+||.+.++...|.+|.
T Consensus 622 YslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 622 YSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred HHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 99999999999999999999988887764
No 420
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.46 E-value=0.037 Score=48.12 Aligned_cols=33 Identities=24% Similarity=0.204 Sum_probs=15.3
Q ss_pred CCCCeeecccc-cccccCCccccCCCcCCEEeCc
Q 011044 297 TKLTDLYLDQN-KLQGKIPHEIGNLRKLEWLMLS 329 (495)
Q Consensus 297 ~~L~~L~L~~n-~i~~~~~~~l~~l~~L~~L~l~ 329 (495)
++|+.|++++| +|++.....+..+++|+.|.+.
T Consensus 151 ~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L~l~ 184 (221)
T KOG3864|consen 151 PSLQDLDLSGCPRITDGGLACLLKLKNLRRLHLY 184 (221)
T ss_pred cchheeeccCCCeechhHHHHHHHhhhhHHHHhc
Confidence 45555555544 2333333344445555555443
No 421
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.86 E-value=0.51 Score=48.30 Aligned_cols=74 Identities=22% Similarity=0.310 Sum_probs=45.2
Q ss_pred cCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHH-HhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 387 STNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVND-LLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 387 ~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~-~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
..++|||||||-|.||.-+..|-.+ ++-.+.+-+ +-++. |.++... . |. ...-.+...|.
T Consensus 213 DykaDiWSlGITLIEMAqiEPPHhe-----lnpMRVllKiaKSeP------PTLlqPS-~---Ws----~~F~DfLk~cL 273 (1187)
T KOG0579|consen 213 DYKADIWSLGITLIEMAQIEPPHHE-----LNPMRVLLKIAKSEP------PTLLQPS-H---WS----RSFSDFLKRCL 273 (1187)
T ss_pred hhhhhHHhhhhHHHHHhccCCCccc-----cchHHHHHHHhhcCC------CcccCcc-h---hh----hHHHHHHHHHH
Confidence 3579999999999999998888432 222222211 11111 2222110 1 11 12345677899
Q ss_pred CCCccCchhHHHHH
Q 011044 466 VESPIRESTQRKLL 479 (495)
Q Consensus 466 ~~~p~~Rp~m~~v~ 479 (495)
..+|..||+..+++
T Consensus 274 ~Knp~~Rp~aaqll 287 (1187)
T KOG0579|consen 274 VKNPRNRPPAAQLL 287 (1187)
T ss_pred hcCCccCCCHHHHh
Confidence 99999999999984
No 422
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.81 E-value=0.12 Score=45.08 Aligned_cols=83 Identities=19% Similarity=0.164 Sum_probs=41.6
Q ss_pred CeEEEEcCCCCCcccCchhccCCCCCCEEeCcCCcCCccCCccccCCCCCcEEEccCCcccccCChhHhhcCCCCCEEEc
Q 011044 56 RVAALNISGLNLTGTIPSELANLSSLQALDLSFNWFYGSIPSSIFNMSSLLSIYFNNNTLFGELPPNFCNQMSNLESLFL 135 (495)
Q Consensus 56 ~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~l~~L~~L~l 135 (495)
.|+.++-+++.|....-..+.+++.++.|.+.+|.--+... -..+....++|+.|++
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~-----------------------L~~l~~~~~~L~~L~l 158 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWC-----------------------LERLGGLAPSLQDLDL 158 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHH-----------------------HHHhcccccchheeec
Confidence 45556666666555554555555555555555553211100 0011112456666666
Q ss_pred cccc-CCccCCcccCCCCCCCEEEccc
Q 011044 136 KYNM-FHGKIPSTLSSCKQLRELSLSS 161 (495)
Q Consensus 136 ~~n~-l~~~~~~~l~~l~~L~~L~l~~ 161 (495)
++|. |+..--..+..+++|+.|.+.+
T Consensus 159 sgC~rIT~~GL~~L~~lknLr~L~l~~ 185 (221)
T KOG3864|consen 159 SGCPRITDGGLACLLKLKNLRRLHLYD 185 (221)
T ss_pred cCCCeechhHHHHHHHhhhhHHHHhcC
Confidence 6663 4444444455666666666553
No 423
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=87.56 E-value=0.014 Score=51.69 Aligned_cols=61 Identities=15% Similarity=0.152 Sum_probs=33.9
Q ss_pred CCCCCEEEcccccCCccCCcccCCCCCCCEEEcccCcCccccCccccCCCCCCEEEccCCCCC
Q 011044 127 MSNLESLFLKYNMFHGKIPSTLSSCKQLRELSLSSNYFSGTIPKEIGNLTKLTRLNLRQNKLQ 189 (495)
Q Consensus 127 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 189 (495)
+..|..|+++.|.+. ..|..++....++.+++..|..+ ..|.+++..++++++++-.|.+.
T Consensus 64 ~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 64 LTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKNEQKKTEFF 124 (326)
T ss_pred HHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchhhhccCcch
Confidence 344455555555444 44555555555555555555544 55666666666666666666543
No 424
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=86.97 E-value=0.43 Score=48.44 Aligned_cols=24 Identities=21% Similarity=0.473 Sum_probs=21.1
Q ss_pred cCCCcceeehhhhhhcccCCCCCc
Q 011044 387 STNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 387 ~~~~dvysfgilllE~~tgk~p~~ 410 (495)
+-.+||||.||++--++.|+.|.+
T Consensus 196 sfEvDiWSlGcvmYtLL~G~PPFe 219 (592)
T KOG0575|consen 196 SFEVDIWSLGCVMYTLLVGRPPFE 219 (592)
T ss_pred CCchhhhhhhhHHHhhhhCCCCcc
Confidence 446899999999999999999954
No 425
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=86.69 E-value=0.73 Score=45.61 Aligned_cols=76 Identities=14% Similarity=0.139 Sum_probs=51.1
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECT 465 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~ 465 (495)
-..|+|+||+||.+-||.+=|.+.. +-+....+.+..+.. .+|- .......+-.+--.|+
T Consensus 183 Yn~KSDiWsLGC~~yEm~~lk~aF~-----a~~m~~Li~ki~~~~----~~Pl-----------p~~ys~el~~lv~~~l 242 (426)
T KOG0589|consen 183 YNEKSDIWSLGCCLYEMCTLKPAFK-----ASNMSELILKINRGL----YSPL-----------PSMYSSELRSLVKSML 242 (426)
T ss_pred CCccCcchhhcchHHHHHhcccccC-----ccchHHHHHHHhhcc----CCCC-----------CccccHHHHHHHHHHh
Confidence 4568999999999999999887743 234444444444322 1110 0011223556778899
Q ss_pred CCCccCchhHHHHHHH
Q 011044 466 VESPIRESTQRKLLQD 481 (495)
Q Consensus 466 ~~~p~~Rp~m~~v~~~ 481 (495)
..+|..||+..+++.+
T Consensus 243 ~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 243 RKNPEHRPSALELLRR 258 (426)
T ss_pred hcCCccCCCHHHHhhC
Confidence 9999999999999876
No 426
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=85.87 E-value=0.77 Score=44.55 Aligned_cols=76 Identities=13% Similarity=0.234 Sum_probs=42.8
Q ss_pred CCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHH-HHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhcCC
Q 011044 388 TNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVN-DLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMECTV 466 (495)
Q Consensus 388 ~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~-~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~ 466 (495)
.+.|+||.||+|.-++||-.|..+... ..++-+-+. ..+... -..+.++ .++ ...+.-.=..
T Consensus 360 ~kVDiWSlGcvLfvcLsG~pPFS~~~~-~~sl~eQI~~G~y~f~--p~~w~~I-----------see---a~dlI~~mL~ 422 (475)
T KOG0615|consen 360 SKVDIWSLGCVLFVCLSGYPPFSEEYT-DPSLKEQILKGRYAFG--PLQWDRI-----------SEE---ALDLINWMLV 422 (475)
T ss_pred chheeeeccceEEEEeccCCCcccccC-CccHHHHHhcCccccc--Chhhhhh-----------hHH---HHHHHHHhhE
Confidence 477999999999999999999544332 222222111 111110 0001111 111 3333444456
Q ss_pred CCccCchhHHHHHH
Q 011044 467 ESPIRESTQRKLLQ 480 (495)
Q Consensus 467 ~~p~~Rp~m~~v~~ 480 (495)
-+|..||+..|+++
T Consensus 423 VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 423 VDPENRPSADEALN 436 (475)
T ss_pred eCcccCcCHHHHhc
Confidence 79999999999963
No 427
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=85.80 E-value=1.1 Score=46.03 Aligned_cols=21 Identities=19% Similarity=0.325 Sum_probs=18.1
Q ss_pred cCCCcceeehhhhhhcccCCC
Q 011044 387 STNGDIYNFGIMIMETFTAKK 407 (495)
Q Consensus 387 ~~~~dvysfgilllE~~tgk~ 407 (495)
+.+.|+||+||+++||+++..
T Consensus 410 ~~~~DvwSlGvil~em~~~~l 430 (507)
T PLN03224 410 PDLFDSYTAGVLLMQMCVPEL 430 (507)
T ss_pred CCccchhhHHHHHHHHHhCCC
Confidence 345799999999999999874
No 428
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=85.67 E-value=0.64 Score=51.25 Aligned_cols=74 Identities=22% Similarity=0.333 Sum_probs=42.8
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCc---ceeeeccccccccccccchhhHHHHHHHHH
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISV---MEVVDANLLSWKDKHFMTKEQCMSFVFNLA 461 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~---~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~ 461 (495)
+...|.|.||.||+++||+- | |+-+|.-..-+...-...+ .++.|++. ..=.++.
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---P----F~TsMERa~iL~~LR~g~iP~~~~f~~~~~---------------~~e~slI 851 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---P----FGTSMERASILTNLRKGSIPEPADFFDPEH---------------PEEASLI 851 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---c----CCchHHHHHHHHhcccCCCCCCcccccccc---------------hHHHHHH
Confidence 56789999999999999994 3 2223332222222222221 12223222 1122444
Q ss_pred hhcCCCCccCchhHHHHHH
Q 011044 462 MECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 462 ~~C~~~~p~~Rp~m~~v~~ 480 (495)
.+=++.+|.+||+..|++.
T Consensus 852 ~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 852 RWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHhcCCCccCCCHHHHhh
Confidence 5557789999999999853
No 429
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=83.04 E-value=0.55 Score=43.73 Aligned_cols=90 Identities=17% Similarity=0.248 Sum_probs=48.7
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHH--HHHHHHhCC---Ccceeeecc-ccccc----cccccchh----
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLR--RWVNDLLSI---SVMEVVDAN-LLSWK----DKHFMTKE---- 451 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~--~wv~~~~~~---~~~~v~d~~-l~~~~----~~~~~~~~---- 451 (495)
.....|||+.||+.-||+||..- |.|..++. -.+++.+.+ +...++..+ ..... ..+....+
T Consensus 179 YG~pVDiWAiGCv~aEl~~G~pL----~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p 254 (396)
T KOG0593|consen 179 YGKPVDIWAIGCVFAELLTGEPL----WPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYP 254 (396)
T ss_pred CCCcccchhhhHHHHHHhcCCcC----CCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcc
Confidence 34568999999999999999764 33433322 222322211 111111111 10000 00000001
Q ss_pred hHHHHHHHHHhhcCCCCccCchhHHHHH
Q 011044 452 QCMSFVFNLAMECTVESPIRESTQRKLL 479 (495)
Q Consensus 452 ~~~~~~~~~~~~C~~~~p~~Rp~m~~v~ 479 (495)
.--...+.+.-.|..-+|.+|++..|.+
T Consensus 255 ~~s~~~ld~~k~cL~~dP~~R~sc~qll 282 (396)
T KOG0593|consen 255 KISNVLLDLLKKCLKMDPDDRLSCEQLL 282 (396)
T ss_pred cchHHHHHHHHHHhcCCccccccHHHHh
Confidence 1112367889999999999999999984
No 430
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=81.83 E-value=1.2 Score=24.67 Aligned_cols=14 Identities=43% Similarity=0.472 Sum_probs=7.3
Q ss_pred CCCCEEeCcCCcCC
Q 011044 79 SSLQALDLSFNWFY 92 (495)
Q Consensus 79 ~~L~~L~L~~n~l~ 92 (495)
++|++|+|++|.+.
T Consensus 2 ~~L~~L~L~~N~l~ 15 (26)
T smart00369 2 PNLRELDLSNNQLS 15 (26)
T ss_pred CCCCEEECCCCcCC
Confidence 44555555555554
No 431
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=81.83 E-value=1.2 Score=24.67 Aligned_cols=14 Identities=43% Similarity=0.472 Sum_probs=7.3
Q ss_pred CCCCEEeCcCCcCC
Q 011044 79 SSLQALDLSFNWFY 92 (495)
Q Consensus 79 ~~L~~L~L~~n~l~ 92 (495)
++|++|+|++|.+.
T Consensus 2 ~~L~~L~L~~N~l~ 15 (26)
T smart00370 2 PNLRELDLSNNQLS 15 (26)
T ss_pred CCCCEEECCCCcCC
Confidence 44555555555554
No 432
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=81.54 E-value=0.53 Score=42.24 Aligned_cols=27 Identities=19% Similarity=0.398 Sum_probs=23.1
Q ss_pred cccCCCcceeehhhhhhcccCCCCCcc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDE 411 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~ 411 (495)
..+.++|+|+||+++.|+++|+.|.+.
T Consensus 176 ~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 176 GYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 445589999999999999999999643
No 433
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=81.53 E-value=1 Score=44.67 Aligned_cols=108 Identities=13% Similarity=0.030 Sum_probs=61.4
Q ss_pred hhhhhhhcCCCccccCCCcceeehhhhhhcccCCCCCccccC-----CCCCHHHHHHHH--h------CCC-cceeeecc
Q 011044 373 EELFLWEYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFN-----GEMTLRRWVNDL--L------SIS-VMEVVDAN 438 (495)
Q Consensus 373 ~~L~l~~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~-----~~~~l~~wv~~~--~------~~~-~~~v~d~~ 438 (495)
+++...|.-.+...++.+|+|||.|+.+|+.||.--.+..-+ ++..|...++-. + .++ -.++++.+
T Consensus 415 RQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~ 494 (590)
T KOG1290|consen 415 RQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRR 494 (590)
T ss_pred hhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccc
Confidence 445555666677778889999999999999999765443211 122333333211 1 111 11222221
Q ss_pred ----------cccccc---ccccchhhHHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 439 ----------LLSWKD---KHFMTKEQCMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 439 ----------l~~~~~---~~~~~~~~~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
...-.+ ..+.+.++++.++....+-=.+..|++||+.++.++
T Consensus 495 G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~ 549 (590)
T KOG1290|consen 495 GELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK 549 (590)
T ss_pred cceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence 111000 111234466667777666667789999999998763
No 434
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=81.41 E-value=0.58 Score=25.41 Aligned_cols=10 Identities=30% Similarity=0.441 Sum_probs=2.9
Q ss_pred CcEEEccCCc
Q 011044 105 LLSIYFNNNT 114 (495)
Q Consensus 105 L~~L~l~~n~ 114 (495)
|++|++++|.
T Consensus 4 L~~L~l~~n~ 13 (24)
T PF13516_consen 4 LETLDLSNNQ 13 (24)
T ss_dssp -SEEE-TSSB
T ss_pred CCEEEccCCc
Confidence 3333333333
No 435
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=81.36 E-value=1.2 Score=40.18 Aligned_cols=75 Identities=12% Similarity=0.166 Sum_probs=48.9
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
.-....|+|+.||+..|.+.|..|....-.+ .-.++. ...++.+|..+.. ....+...|
T Consensus 198 ~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~-----etYkrI---~k~~~~~p~~is~-------------~a~dlI~~l 256 (281)
T KOG0580|consen 198 GHDKFVDLWSLGVLCYEFLVGLPPFESQSHS-----ETYKRI---RKVDLKFPSTISG-------------GAADLISRL 256 (281)
T ss_pred CccchhhHHHHHHHHHHHHhcCCchhhhhhH-----HHHHHH---HHccccCCcccCh-------------hHHHHHHHH
Confidence 3455789999999999999999995432211 111111 1133444432211 145678899
Q ss_pred CCCCccCchhHHHHHH
Q 011044 465 TVESPIRESTQRKLLQ 480 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~~ 480 (495)
...+|.+|.+..||+.
T Consensus 257 l~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 257 LVKNPIERLALTEVMD 272 (281)
T ss_pred hccCccccccHHHHhh
Confidence 9999999999999864
No 436
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=81.18 E-value=0.53 Score=41.37 Aligned_cols=27 Identities=22% Similarity=0.460 Sum_probs=24.3
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccc
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEI 412 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~ 412 (495)
.+.++||||+||-..|+.+++-|.+.-
T Consensus 229 Y~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 229 YSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred ceeehhhhhhhhhhhhhhhcccccccc
Confidence 567899999999999999999998753
No 437
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=80.00 E-value=0.13 Score=45.74 Aligned_cols=87 Identities=23% Similarity=0.218 Sum_probs=46.5
Q ss_pred hhcCCCCceeeCCCCcCCCCCCcccccccccceeeccCcccccccchhhhhCCccccccccccceeeecccccccCCCCC
Q 011044 220 IFSLSSLLNLDLSLNNFTGIIPSSIGNLSSLQKLYLSDNQLSGELPANIGNNLPSLQTLSLYVNDFSGAIPKEIGNLTKL 299 (495)
Q Consensus 220 l~~l~~L~~L~Ls~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 299 (495)
+......+.||++.|++... -..++.++.+..|+++.|++. ..|..+. ....+..+.+..|+.+ ..|.++...+++
T Consensus 38 i~~~kr~tvld~~s~r~vn~-~~n~s~~t~~~rl~~sknq~~-~~~~d~~-q~~e~~~~~~~~n~~~-~~p~s~~k~~~~ 113 (326)
T KOG0473|consen 38 IASFKRVTVLDLSSNRLVNL-GKNFSILTRLVRLDLSKNQIK-FLPKDAK-QQRETVNAASHKNNHS-QQPKSQKKEPHP 113 (326)
T ss_pred hhccceeeeehhhhhHHHhh-ccchHHHHHHHHHhccHhhHh-hChhhHH-HHHHHHHHHhhccchh-hCCccccccCCc
Confidence 34444555555555554321 122444455566666666654 4555444 4455555555555554 555666666666
Q ss_pred Ceeeccccccc
Q 011044 300 TDLYLDQNKLQ 310 (495)
Q Consensus 300 ~~L~L~~n~i~ 310 (495)
+++++.++.+.
T Consensus 114 k~~e~k~~~~~ 124 (326)
T KOG0473|consen 114 KKNEQKKTEFF 124 (326)
T ss_pred chhhhccCcch
Confidence 66666665543
No 438
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=76.78 E-value=11 Score=37.61 Aligned_cols=108 Identities=21% Similarity=0.140 Sum_probs=51.8
Q ss_pred ccceeeccCcccccccchhhh-hCCcccccccccccee---e--ecc--c--ccccCCCCCCeeecccccccccCC---c
Q 011044 249 SLQKLYLSDNQLSGELPANIG-NNLPSLQTLSLYVNDF---S--GAI--P--KEIGNLTKLTDLYLDQNKLQGKIP---H 315 (495)
Q Consensus 249 ~L~~L~l~~n~l~~~~~~~~~-~~l~~L~~L~L~~n~l---~--~~~--~--~~l~~l~~L~~L~L~~n~i~~~~~---~ 315 (495)
.+++|.+..|.+.++.-.... ..-++.+.+++....- . +.. + ..-....-+..+.++.|....... .
T Consensus 355 R~q~l~~rdnnldgeg~~vgk~~~s~s~r~l~agrs~~kqvm~s~~~a~~v~k~~~~~g~l~el~ls~~~lka~l~s~in 434 (553)
T KOG4242|consen 355 RVQVLLQRDNNLDGEGGAVGKRKQSKSGRILKAGRSGDKQVMDSSTEAPPVSKKSRTHGVLAELSLSPGPLKAGLESAIN 434 (553)
T ss_pred eeeEeeccccccccccccccceeeccccccccccccCCceeccccccchhhhhhhcccccccCcccCCCcccccHHHHHH
Confidence 477777777766654332211 0223455555543221 0 000 0 001222345667777776653221 2
Q ss_pred cccCCCcCCEEeCcCCcccc----cCCcCccCCCCCcEEEccCCc
Q 011044 316 EIGNLRKLEWLMLSHNKLVG----VVPAPIFNLSTLISLQLHNNS 356 (495)
Q Consensus 316 ~l~~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~n~ 356 (495)
.+..-+.+..|++++|.... .+|........+.....+.|.
T Consensus 435 ~l~stqtl~kldisgn~mgd~gap~lpkalq~n~rlr~ipds~n~ 479 (553)
T KOG4242|consen 435 KLLSTQTLAKLDISGNGMGDGGAPPLPKALQSNCRLRPIPDSLNL 479 (553)
T ss_pred hhccCcccccccccCCCcccCCCCcCccccCCCCccCCCCCCCCC
Confidence 34455778888888886543 233333333444444444444
No 439
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=74.57 E-value=1.6 Score=40.05 Aligned_cols=38 Identities=26% Similarity=0.448 Sum_probs=28.6
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHH
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWV 423 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv 423 (495)
+....|+|.|||++.-.+||+-|+......+-+...|.
T Consensus 202 ~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~ 239 (378)
T KOG1345|consen 202 VNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWE 239 (378)
T ss_pred ecccccchheeeeeeeeecCCCcchhhhccCchHHHHH
Confidence 44568999999999999999999986554444444443
No 440
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=72.41 E-value=2.9 Score=41.51 Aligned_cols=94 Identities=18% Similarity=0.162 Sum_probs=53.4
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHH--hCCCcceeeec--cccc-------ccccc--ccc
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDL--LSISVMEVVDA--NLLS-------WKDKH--FMT 449 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~--~~~~~~~v~d~--~l~~-------~~~~~--~~~ 449 (495)
.+--+.+.|+|++|++..|+.+=+. .|.|.-.+.+..+.. +.....+..+. .+.+ +.... ...
T Consensus 184 s~~Ys~pvD~wA~GcI~aEl~sLrP----LFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L 259 (538)
T KOG0661|consen 184 SGYYSSPVDMWAVGCIMAELYSLRP----LFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDL 259 (538)
T ss_pred ccccCCchHHHHHHHHHHHHHHhcc----cCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHh
Confidence 3445668999999999999987543 355554444444432 21111111111 1111 00000 001
Q ss_pred hhhHHHHHHHHHhhcCCCCccCchhHHHHHH
Q 011044 450 KEQCMSFVFNLAMECTVESPIRESTQRKLLQ 480 (495)
Q Consensus 450 ~~~~~~~~~~~~~~C~~~~p~~Rp~m~~v~~ 480 (495)
...+..+.+++...|.+=+|.+||+..++++
T Consensus 260 ~p~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 260 LPNASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred CcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 1134556788888999999999999999864
No 441
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=69.39 E-value=15 Score=36.61 Aligned_cols=85 Identities=16% Similarity=0.053 Sum_probs=46.7
Q ss_pred cccccccccceeeecccc--cccCCCCCCeeecccccccc-cCCccc--------cCCCcCCEEeCcCCcccccC---Cc
Q 011044 274 SLQTLSLYVNDFSGAIPK--EIGNLTKLTDLYLDQNKLQG-KIPHEI--------GNLRKLEWLMLSHNKLVGVV---PA 339 (495)
Q Consensus 274 ~L~~L~L~~n~l~~~~~~--~l~~l~~L~~L~L~~n~i~~-~~~~~l--------~~l~~L~~L~l~~n~l~~~~---~~ 339 (495)
.++.|.+..|++.+..-. .....+..+.+++....-.. .++... ...--+..+.++.|++.... ..
T Consensus 355 R~q~l~~rdnnldgeg~~vgk~~~s~s~r~l~agrs~~kqvm~s~~~a~~v~k~~~~~g~l~el~ls~~~lka~l~s~in 434 (553)
T KOG4242|consen 355 RVQVLLQRDNNLDGEGGAVGKRKQSKSGRILKAGRSGDKQVMDSSTEAPPVSKKSRTHGVLAELSLSPGPLKAGLESAIN 434 (553)
T ss_pred eeeEeeccccccccccccccceeeccccccccccccCCceeccccccchhhhhhhcccccccCcccCCCcccccHHHHHH
Confidence 477888887777654332 23334556666655432210 000000 11224667778888765322 22
Q ss_pred CccCCCCCcEEEccCCcCc
Q 011044 340 PIFNLSTLISLQLHNNSLS 358 (495)
Q Consensus 340 ~~~~l~~L~~L~l~~n~l~ 358 (495)
....-+.+..|++++|...
T Consensus 435 ~l~stqtl~kldisgn~mg 453 (553)
T KOG4242|consen 435 KLLSTQTLAKLDISGNGMG 453 (553)
T ss_pred hhccCcccccccccCCCcc
Confidence 3445678999999999765
No 442
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=68.67 E-value=4.6 Score=22.56 Aligned_cols=14 Identities=43% Similarity=0.468 Sum_probs=9.1
Q ss_pred CCCCEEeCcCCcCC
Q 011044 79 SSLQALDLSFNWFY 92 (495)
Q Consensus 79 ~~L~~L~L~~n~l~ 92 (495)
++|++|+++.|+|+
T Consensus 2 ~~L~~L~L~~NkI~ 15 (26)
T smart00365 2 TNLEELDLSQNKIK 15 (26)
T ss_pred CccCEEECCCCccc
Confidence 46666777776664
No 443
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=68.44 E-value=6.2 Score=40.51 Aligned_cols=77 Identities=21% Similarity=0.323 Sum_probs=45.2
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 463 (495)
|...-+.||||+||-..|+.-.|.|...|- .|+ -+-....+. .|.+.+ + .|.+ ......-.
T Consensus 200 GqYdgkvDvWSLGITCIELAERkPPlFnMN--AMS---ALYHIAQNe-----sPtLqs--~----eWS~---~F~~Fvd~ 260 (948)
T KOG0577|consen 200 GQYDGKVDVWSLGITCIELAERKPPLFNMN--AMS---ALYHIAQNE-----SPTLQS--N----EWSD---YFRNFVDS 260 (948)
T ss_pred cccCCccceeeccchhhhhhhcCCCccCch--HHH---HHHHHHhcC-----CCCCCC--c----hhHH---HHHHHHHH
Confidence 445557899999999999998888854321 121 111000100 122211 1 1111 24456778
Q ss_pred cCCCCccCchhHHHHH
Q 011044 464 CTVESPIRESTQRKLL 479 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~ 479 (495)
|...-|.+||+..+.+
T Consensus 261 CLqKipqeRptse~ll 276 (948)
T KOG0577|consen 261 CLQKIPQERPTSEELL 276 (948)
T ss_pred HHhhCcccCCcHHHHh
Confidence 9999999999988874
No 444
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=68.16 E-value=3.8 Score=39.26 Aligned_cols=47 Identities=19% Similarity=0.262 Sum_probs=32.9
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCC
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSIS 430 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~ 430 (495)
|.-.....+..+|-||.||++.||++|+.|.. +-+..+|.+.....+
T Consensus 195 Eil~~~gy~~~vDWWsLGillYeML~G~pPF~-----~~~~~~~~~~I~~~k 241 (357)
T KOG0598|consen 195 EILLGKGYDKAVDWWSLGILLYEMLTGKPPFY-----AEDVKKMYDKILKGK 241 (357)
T ss_pred HHHhcCCCCcccchHhHHHHHHHHhhCCCCCc-----CccHHHHHHHHhcCc
Confidence 33334445667899999999999999999943 235556666655444
No 445
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=67.48 E-value=6.7 Score=37.62 Aligned_cols=99 Identities=15% Similarity=0.102 Sum_probs=56.1
Q ss_pred hhhhcCCCc-cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHH--Hh--CCC--c-------ceeeeccccc
Q 011044 376 FLWEYGREG-RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVND--LL--SIS--V-------MEVVDANLLS 441 (495)
Q Consensus 376 ~l~~~~~~~-~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~--~~--~~~--~-------~~v~d~~l~~ 441 (495)
..+|.-++. .-+.+.||||-||++-||+-|+.- |.|+....+.+.- .+ |.. + .+...+.+..
T Consensus 192 RaPELifga~~Yt~~IDiWSaGCV~aELl~g~pl----FpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~ 267 (364)
T KOG0658|consen 192 RAPELIFGATEYTTSIDIWSAGCVMAELLKGQPL----FPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKA 267 (364)
T ss_pred cCHHHHcCccccCceeEEhhhhHHHHHHhcCCcc----cCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCccccc
Confidence 333433332 356789999999999999998754 5555444444432 22 111 1 1111222211
Q ss_pred cccccccchhhHHHHHHHHHhhcCCCCccCchhHHHHH
Q 011044 442 WKDKHFMTKEQCMSFVFNLAMECTVESPIRESTQRKLL 479 (495)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~C~~~~p~~Rp~m~~v~ 479 (495)
..-. .......-.+.+++...+..-+|.+|-+..|++
T Consensus 268 ~~~~-~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l 304 (364)
T KOG0658|consen 268 HPWH-KVFFKRLPPDALDLLSKLLQYSPSKRLSALEAL 304 (364)
T ss_pred ccce-eecccCCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence 1000 001112334478889999999999999988885
No 446
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=66.32 E-value=1.8 Score=42.06 Aligned_cols=32 Identities=22% Similarity=0.436 Sum_probs=26.8
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCc
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
|--...+...|+|.||.|+++.|+++|+.|.+
T Consensus 184 EV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~ 215 (429)
T KOG0595|consen 184 EVIMSQQYDAKADLWSIGTILYQCLTGKPPFD 215 (429)
T ss_pred HHHHhccccchhhHHHHHHHHHHHHhCCCCcc
Confidence 33345666788999999999999999999976
No 447
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=65.66 E-value=9.4 Score=36.38 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=25.8
Q ss_pred hhhhhcCCCccccCCCcceeehhhhhhcccCCC
Q 011044 375 LFLWEYGREGRVSTNGDIYNFGIMIMETFTAKK 407 (495)
Q Consensus 375 L~l~~~~~~~~~~~~~dvysfgilllE~~tgk~ 407 (495)
....+++.+.+.+...|+|+||.-.+||-.+..
T Consensus 248 ~~a~~sg~~tn~~~a~dIy~fgmcAlemailEi 280 (458)
T KOG1266|consen 248 FSAPESGTTTNTTGASDIYKFGMCALEMAILEI 280 (458)
T ss_pred cccCCcCcccccccchhhhhhhHHHHHHHHhee
Confidence 344567777778889999999988888877653
No 448
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=63.72 E-value=5 Score=40.44 Aligned_cols=25 Identities=20% Similarity=0.452 Sum_probs=21.5
Q ss_pred CCCcceeehhhhhhcccCCCCCccc
Q 011044 388 TNGDIYNFGIMIMETFTAKKPTDEI 412 (495)
Q Consensus 388 ~~~dvysfgilllE~~tgk~p~~~~ 412 (495)
...||||+||+|.-++.|+.|..+.
T Consensus 198 PAVDiWSLGVILyMLVCGq~PFqeA 222 (864)
T KOG4717|consen 198 PAVDIWSLGVILYMLVCGQPPFQEA 222 (864)
T ss_pred cchhhhHHHHHHHHHHhCCCccccc
Confidence 3589999999999999999996543
No 449
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=63.23 E-value=3.9 Score=39.09 Aligned_cols=23 Identities=26% Similarity=0.405 Sum_probs=19.7
Q ss_pred ccCCCcceeehhhhhhcccCCCC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKP 408 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p 408 (495)
-+...|+||.||++-||++||.-
T Consensus 205 Yt~aiDiWSvGCI~AEmL~gkpl 227 (359)
T KOG0660|consen 205 YTKAIDIWSVGCILAEMLTGKPL 227 (359)
T ss_pred ccchhhhhhhhHHHHHHHcCCCC
Confidence 45568999999999999999764
No 450
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=61.77 E-value=4.9 Score=36.07 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=26.3
Q ss_pred CcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHH
Q 011044 390 GDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDL 426 (495)
Q Consensus 390 ~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~ 426 (495)
-|+|||||++-+|+-.|.|. |.|..+-.+.|+-+
T Consensus 214 LD~WS~GcmlA~miFrkepF---FhG~dN~DQLVkIa 247 (338)
T KOG0668|consen 214 LDMWSLGCMLASMIFRKEPF---FHGHDNYDQLVKIA 247 (338)
T ss_pred HHHHHHHHHHHHHHhccCcc---cCCCCCHHHHHHHH
Confidence 68999999999999999983 55655555666543
No 451
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=61.76 E-value=5 Score=40.63 Aligned_cols=31 Identities=13% Similarity=0.410 Sum_probs=26.0
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCC
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~ 409 (495)
|....+.++..+|+|.|||++..|+.|+.|.
T Consensus 257 ElL~~~~~~~~sDiWAlGCilyQmlaG~PPF 287 (604)
T KOG0592|consen 257 ELLNDSPAGPSSDLWALGCILYQMLAGQPPF 287 (604)
T ss_pred HHhcCCCCCcccchHHHHHHHHHHhcCCCCC
Confidence 4444566778899999999999999999994
No 452
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=61.56 E-value=3.3 Score=40.40 Aligned_cols=24 Identities=25% Similarity=0.595 Sum_probs=21.1
Q ss_pred CCCcceeehhhhhhcccCCCCCcc
Q 011044 388 TNGDIYNFGIMIMETFTAKKPTDE 411 (495)
Q Consensus 388 ~~~dvysfgilllE~~tgk~p~~~ 411 (495)
...|-|+|||+|.||+.|+.|.|.
T Consensus 529 ksvDWWa~GVLLyEmlaGQpPFdG 552 (683)
T KOG0696|consen 529 KSVDWWAFGVLLYEMLAGQPPFDG 552 (683)
T ss_pred cchhHHHHHHHHHHHHcCCCCCCC
Confidence 357999999999999999999764
No 453
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=61.33 E-value=15 Score=38.52 Aligned_cols=100 Identities=11% Similarity=0.131 Sum_probs=53.1
Q ss_pred ccccCCCcceeehhhhhhcccCCCCCccccCCCCCH-HHHHHHHh-CCCcceeeeccccc---ccc------ccccchhh
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTL-RRWVNDLL-SISVMEVVDANLLS---WKD------KHFMTKEQ 452 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l-~~wv~~~~-~~~~~~v~d~~l~~---~~~------~~~~~~~~ 452 (495)
+..+...|.|||||.+.|..||..|.....+..-+- .-|....- +..+.-.+++...+ +.. ....+..+
T Consensus 199 ~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~ 278 (732)
T KOG4250|consen 199 KKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLAT 278 (732)
T ss_pred cCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHh
Confidence 445667899999999999999999976533221111 12332221 22333333333321 111 11122334
Q ss_pred HHHHHHHHHhhcCCCCccCch--hHHHHHHHHHHHH
Q 011044 453 CMSFVFNLAMECTVESPIRES--TQRKLLQDSQKLE 486 (495)
Q Consensus 453 ~~~~~~~~~~~C~~~~p~~Rp--~m~~v~~~l~~i~ 486 (495)
.+..++...+.| +|++|- ...+..+.+..|.
T Consensus 279 ~~~kwLa~~L~~---~~~~~~~~~~~~~Fa~~~dIL 311 (732)
T KOG4250|consen 279 RLTKWLASMLEW---NPRKRGHEGFDRFFAEVDDIL 311 (732)
T ss_pred hhhHHHHHHHhh---hHHHhCCCCcchHHHHHHHHH
Confidence 566677766666 445555 5555555555543
No 454
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=61.16 E-value=13 Score=36.73 Aligned_cols=26 Identities=12% Similarity=0.344 Sum_probs=22.9
Q ss_pred ccccCCCcceeehhhhhhcccCCCCC
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~ 409 (495)
...+...|+||.||++..|++|..|.
T Consensus 213 ~~y~~~~DiWS~Gvi~yiLL~G~~PF 238 (382)
T KOG0032|consen 213 RPYGDEVDVWSIGVILYILLSGVPPF 238 (382)
T ss_pred CCCCcccchhHHHHHHHHHhhCCCCC
Confidence 45677899999999999999999994
No 455
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=59.65 E-value=5.3 Score=40.06 Aligned_cols=25 Identities=24% Similarity=0.373 Sum_probs=21.3
Q ss_pred cccCCCcceeehhhhhhcccCCCCC
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~ 409 (495)
..+...|+||.||++.||++||.+.
T Consensus 296 ~Yg~aVDlWS~GCIl~El~~gkPI~ 320 (560)
T KOG0600|consen 296 SYGTAVDLWSVGCILAELFLGKPIL 320 (560)
T ss_pred ccccceeehhhhHHHHHHHcCCCCc
Confidence 3456789999999999999998763
No 456
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=59.41 E-value=4.5 Score=38.43 Aligned_cols=92 Identities=20% Similarity=0.256 Sum_probs=50.9
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHH--Hh--CCC--ccee---eecc--ccccccccccch--hh
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVND--LL--SIS--VMEV---VDAN--LLSWKDKHFMTK--EQ 452 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~--~~--~~~--~~~v---~d~~--l~~~~~~~~~~~--~~ 452 (495)
.++..|+||+||+..||++++.- |.|..++.+-.+- .+ |.. .-.+ .|-. ...+........ ..
T Consensus 198 Ys~~vDiWs~GcIfaEm~~~~~L----FpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~ 273 (323)
T KOG0594|consen 198 YSTSVDIWSLGCIFAEMFTRRPL----FPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPK 273 (323)
T ss_pred CCCCcchHhHHHHHHHHHhCCCC----CCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccc
Confidence 56789999999999999996543 5554443332221 11 211 1111 1111 111110000000 00
Q ss_pred HHHHHHHHHhhcCCCCccCchhHHHHHHH
Q 011044 453 CMSFVFNLAMECTVESPIRESTQRKLLQD 481 (495)
Q Consensus 453 ~~~~~~~~~~~C~~~~p~~Rp~m~~v~~~ 481 (495)
-.....++...+...+|..|.|...+++.
T Consensus 274 ~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 274 LDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 01347788999999999999999998764
No 457
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=58.75 E-value=8.4 Score=21.80 Aligned_cols=13 Identities=54% Similarity=0.458 Sum_probs=7.0
Q ss_pred CCCEEeCcCCcCC
Q 011044 80 SLQALDLSFNWFY 92 (495)
Q Consensus 80 ~L~~L~L~~n~l~ 92 (495)
+|++|+|++|.+.
T Consensus 3 ~L~~LdL~~N~i~ 15 (28)
T smart00368 3 SLRELDLSNNKLG 15 (28)
T ss_pred ccCEEECCCCCCC
Confidence 4555555555553
No 458
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=55.07 E-value=8.9 Score=39.01 Aligned_cols=81 Identities=20% Similarity=0.135 Sum_probs=35.7
Q ss_pred CCCCCCEEeCcCCcCCcc--CCccccCCCCCcEEEccCC--cccccCChhHhhcCCCCCEEEcccccCCccCCc---cc-
Q 011044 77 NLSSLQALDLSFNWFYGS--IPSSIFNMSSLLSIYFNNN--TLFGELPPNFCNQMSNLESLFLKYNMFHGKIPS---TL- 148 (495)
Q Consensus 77 ~l~~L~~L~L~~n~l~~~--~~~~l~~l~~L~~L~l~~n--~~~~~~p~~~~~~l~~L~~L~l~~n~l~~~~~~---~l- 148 (495)
+.+.+..++|++|++... +..--...|+|+.|+|++| .+.. .+.--..+...|++|-+.+|.+...... .+
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~-~~el~K~k~l~Leel~l~GNPlc~tf~~~s~yv~ 294 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISS-ESELDKLKGLPLEELVLEGNPLCTTFSDRSEYVS 294 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcc-hhhhhhhcCCCHHHeeecCCccccchhhhHHHHH
Confidence 345555555555555421 1111123455666666666 2211 1110001134466777777766542211 11
Q ss_pred ---CCCCCCCEEE
Q 011044 149 ---SSCKQLRELS 158 (495)
Q Consensus 149 ---~~l~~L~~L~ 158 (495)
..+|+|..||
T Consensus 295 ~i~~~FPKL~~LD 307 (585)
T KOG3763|consen 295 AIRELFPKLLRLD 307 (585)
T ss_pred HHHHhcchheeec
Confidence 2456666665
No 459
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=54.95 E-value=7.6 Score=38.41 Aligned_cols=96 Identities=19% Similarity=0.254 Sum_probs=53.0
Q ss_pred CCCcceeehhhhhhcccCCCCCccccCC-CCCHHHHHHHHhCC-Cccee-eecccccccc-ccccchhhHHHHHHHHHhh
Q 011044 388 TNGDIYNFGIMIMETFTAKKPTDEIFNG-EMTLRRWVNDLLSI-SVMEV-VDANLLSWKD-KHFMTKEQCMSFVFNLAME 463 (495)
Q Consensus 388 ~~~dvysfgilllE~~tgk~p~~~~~~~-~~~l~~wv~~~~~~-~~~~v-~d~~l~~~~~-~~~~~~~~~~~~~~~~~~~ 463 (495)
..+|+|+||.++-|+.....-.. ...+ ..+.-+||-.--+. .+.+| -..++..... .| ...+++..+.++...
T Consensus 405 k~ADIYafgLVlWEiarRc~~gg-i~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW--~s~~~l~~m~klMke 481 (513)
T KOG2052|consen 405 KRADIYAFGLVLWEIARRCESGG-IVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRW--KSDPALRVMAKLMKE 481 (513)
T ss_pred hHHHHHHHHHHHHHHHHHhhcCC-EehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCccc--ccCHHHHHHHHHHHH
Confidence 35899999999999874322111 0110 12222333211110 11122 2222322111 11 123678889999999
Q ss_pred cCCCCccCchhHHHHHHHHHHHH
Q 011044 464 CTVESPIRESTQRKLLQDSQKLE 486 (495)
Q Consensus 464 C~~~~p~~Rp~m~~v~~~l~~i~ 486 (495)
|...+|..|-+.-.+-+.|.++.
T Consensus 482 CW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 482 CWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred hhcCCchhhhHHHHHHHHHHHHh
Confidence 99999999998877766666554
No 460
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=54.25 E-value=7.6 Score=37.00 Aligned_cols=24 Identities=29% Similarity=0.380 Sum_probs=20.2
Q ss_pred cccCCCcceeehhhhhhcccCCCC
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKP 408 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p 408 (495)
..++..|+||+||++-|+++++.-
T Consensus 254 tyst~iDMWSvGCI~aE~l~~kPl 277 (419)
T KOG0663|consen 254 TYSTAVDMWSVGCIFAELLTQKPL 277 (419)
T ss_pred ccCcchhhhhHHHHHHHHHhcCCC
Confidence 356789999999999999988653
No 461
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=54.07 E-value=7.9 Score=39.35 Aligned_cols=62 Identities=32% Similarity=0.315 Sum_probs=26.8
Q ss_pred CcccccEEEecCCcCCCc--CchhhhcCCCCceeeCCCC--cCCCCCCccccc--ccccceeeccCcccc
Q 011044 198 NLAELEMLWLQNNSLTGT--IPSSIFSLSSLLNLDLSLN--NFTGIIPSSIGN--LSSLQKLYLSDNQLS 261 (495)
Q Consensus 198 ~l~~L~~L~l~~n~l~~~--~~~~l~~l~~L~~L~Ls~n--~l~~~~~~~l~~--~~~L~~L~l~~n~l~ 261 (495)
+.+.+..++|++|++... +..--...|+|..|+|++| .+... ..+.+ ...|++|-+.+|.+.
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~--~el~K~k~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSE--SELDKLKGLPLEELVLEGNPLC 283 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcch--hhhhhhcCCCHHHeeecCCccc
Confidence 344455555555554311 1111123455666666665 22211 11111 124556666666554
No 462
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=53.22 E-value=9.9 Score=21.23 Aligned_cols=13 Identities=38% Similarity=0.411 Sum_probs=7.5
Q ss_pred CCCEEeCcCCcCC
Q 011044 80 SLQALDLSFNWFY 92 (495)
Q Consensus 80 ~L~~L~L~~n~l~ 92 (495)
+|++|++++|+++
T Consensus 3 ~L~~L~vs~N~Lt 15 (26)
T smart00364 3 SLKELNVSNNQLT 15 (26)
T ss_pred ccceeecCCCccc
Confidence 4556666666554
No 463
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=53.10 E-value=6.1 Score=41.12 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=26.0
Q ss_pred hhcCCCccccCCCcceeehhhhhhcccCCCCC
Q 011044 378 WEYGREGRVSTNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 378 ~~~~~~~~~~~~~dvysfgilllE~~tgk~p~ 409 (495)
+|-......+...|=|+|||++.||+.|..|.
T Consensus 537 PEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF 568 (694)
T KOG0694|consen 537 PEVLTEQSYTRAVDWWGLGVLLYEMLVGESPF 568 (694)
T ss_pred hhhhccCcccchhhHHHHHHHHHHHHcCCCCC
Confidence 34444556677899999999999999999994
No 464
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=52.47 E-value=6.1 Score=37.34 Aligned_cols=36 Identities=22% Similarity=0.394 Sum_probs=29.3
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHH
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVND 425 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~ 425 (495)
..+..|+||.||++-||++|+.- |.|+..+.+|-+.
T Consensus 194 ~ke~vdiwSvGci~gEli~~~Vl----f~g~d~idQ~~ki 229 (369)
T KOG0665|consen 194 YKENVDIWSVGCIMGELILGTVL----FPGKDHIDQWNKI 229 (369)
T ss_pred CcccchhhhhhhHHHHHhhceEE----ecCchHHHHHHHH
Confidence 66789999999999999999764 5566777788764
No 465
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=47.82 E-value=16 Score=36.15 Aligned_cols=26 Identities=19% Similarity=0.557 Sum_probs=23.3
Q ss_pred ccccCCCcceeehhhhhhcccCCCCC
Q 011044 384 GRVSTNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 384 ~~~~~~~dvysfgilllE~~tgk~p~ 409 (495)
.+++.|.||||.||+...-+-|++|.
T Consensus 659 PKIsnKVDVWSvGVIFyQClYGrKPF 684 (775)
T KOG1151|consen 659 PKISNKVDVWSVGVIFYQCLYGRKPF 684 (775)
T ss_pred CccccceeeEeeehhhhhhhccCCCC
Confidence 36778999999999999999999994
No 466
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=47.55 E-value=7.9 Score=35.22 Aligned_cols=27 Identities=19% Similarity=0.311 Sum_probs=22.8
Q ss_pred CccccCCCcceeehhhhhhcccCCCCC
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~ 409 (495)
....+-..|+|+.||+|.-++.|..|.
T Consensus 186 kdpy~kpvDiW~cGViLfiLL~G~~PF 212 (355)
T KOG0033|consen 186 KDPYSKPVDIWACGVILYILLVGYPPF 212 (355)
T ss_pred cCCCCCcchhhhhhHHHHHHHhCCCCC
Confidence 445566799999999999999999993
No 467
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=44.15 E-value=23 Score=33.21 Aligned_cols=73 Identities=21% Similarity=0.375 Sum_probs=42.9
Q ss_pred CCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHH-HHHHHhhcCC
Q 011044 388 TNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSF-VFNLAMECTV 466 (495)
Q Consensus 388 ~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~-~~~~~~~C~~ 466 (495)
.++|+||+||-..||..||.|...... ....+ +++.+. .|.+ ..++.+.. .-.....|..
T Consensus 208 ~~ADIWSLGITaIEMAEG~PPYsDIHP----MRAIF--MIPT~P----PPTF---------~KPE~WS~~F~DFi~~CLi 268 (502)
T KOG0574|consen 208 TKADIWSLGITAIEMAEGRPPYSDIHP----MRAIF--MIPTKP----PPTF---------KKPEEWSSEFNDFIRSCLI 268 (502)
T ss_pred hhhhHhhhcchhhhhhcCCCCcccccc----cceeE--eccCCC----CCCC---------CChHhhhhHHHHHHHHHhc
Confidence 468999999999999999999653221 00000 011110 0111 01122222 4456778999
Q ss_pred CCccCchhHHHHH
Q 011044 467 ESPIRESTQRKLL 479 (495)
Q Consensus 467 ~~p~~Rp~m~~v~ 479 (495)
..|++|.+..+..
T Consensus 269 K~PE~R~TA~~L~ 281 (502)
T KOG0574|consen 269 KKPEERKTALRLC 281 (502)
T ss_pred CCHHHHHHHHHHh
Confidence 9999998877763
No 468
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=41.33 E-value=9.9 Score=38.93 Aligned_cols=41 Identities=17% Similarity=0.432 Sum_probs=29.4
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhC
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLS 428 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~ 428 (495)
....+..+|.||.||++.|+++|+.|.- ..++.+.|+....
T Consensus 174 e~pyd~~sDlWslGcilYE~~~G~PPF~-----a~si~~Lv~~I~~ 214 (808)
T KOG0597|consen 174 EQPYDHTSDLWSLGCILYELYVGQPPFY-----ARSITQLVKSILK 214 (808)
T ss_pred CCCccchhhHHHHHHHHHHHhcCCCCch-----HHHHHHHHHHHhc
Confidence 4445567899999999999999999943 1244555655543
No 469
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=39.00 E-value=33 Score=32.36 Aligned_cols=83 Identities=10% Similarity=0.171 Sum_probs=52.2
Q ss_pred CccccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHh
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAM 462 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 462 (495)
..+....+|.||.||+..-++.|=.|.-...+ ..+..=++..+..+.-++=+ ....|+++..+=.+
T Consensus 237 ~eKydkscdmwSlgVimYIlLCGyPPFYS~hg--~aispgMk~rI~~gqy~FP~------------pEWs~VSe~aKdlI 302 (400)
T KOG0604|consen 237 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG--LAISPGMKRRIRTGQYEFPE------------PEWSCVSEAAKDLI 302 (400)
T ss_pred chhcCCCCCccchhHHHHHhhcCCCcccccCC--ccCChhHHhHhhccCccCCC------------hhHhHHHHHHHHHH
Confidence 34445568999999999999999888655443 33334444444333222211 12256666665445
Q ss_pred hc-CCCCccCchhHHHHH
Q 011044 463 EC-TVESPIRESTQRKLL 479 (495)
Q Consensus 463 ~C-~~~~p~~Rp~m~~v~ 479 (495)
.| ....|.+|-+..++.
T Consensus 303 R~LLkt~PteRlTI~~~m 320 (400)
T KOG0604|consen 303 RKLLKTEPTERLTIEEVM 320 (400)
T ss_pred HHHhcCCchhheeHHHhh
Confidence 55 568999999999984
No 470
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=36.56 E-value=26 Score=19.22 Aligned_cols=11 Identities=45% Similarity=0.446 Sum_probs=5.4
Q ss_pred CCCCEEeCcCC
Q 011044 79 SSLQALDLSFN 89 (495)
Q Consensus 79 ~~L~~L~L~~n 89 (495)
++|++|+|++|
T Consensus 2 ~~L~~L~l~~C 12 (26)
T smart00367 2 PNLRELDLSGC 12 (26)
T ss_pred CCCCEeCCCCC
Confidence 44455555544
No 471
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=33.98 E-value=42 Score=31.14 Aligned_cols=35 Identities=20% Similarity=0.427 Sum_probs=25.2
Q ss_pred ccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHH
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVN 424 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~ 424 (495)
-....|+|+-||++-|++-|. | .|.|+.++.+..+
T Consensus 179 Yg~~VDmWavGCI~AELllr~-P---~fpG~sDidQL~~ 213 (318)
T KOG0659|consen 179 YGTGVDMWAVGCIFAELLLRV-P---FFPGDSDIDQLSK 213 (318)
T ss_pred cCCcchhhhHHHHHHHHHccC-C---CCCCCchHHHHHH
Confidence 456689999999999999653 3 3556666655544
No 472
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=32.43 E-value=61 Score=35.05 Aligned_cols=27 Identities=26% Similarity=0.465 Sum_probs=21.3
Q ss_pred CccccCCCcceeehhhhhhcccC-CCCC
Q 011044 383 EGRVSTNGDIYNFGIMIMETFTA-KKPT 409 (495)
Q Consensus 383 ~~~~~~~~dvysfgilllE~~tg-k~p~ 409 (495)
..+-+...|+||+||+..-.+|| +-|.
T Consensus 688 ~~~~~~avDiFslGCvfyYvltgG~HpF 715 (903)
T KOG1027|consen 688 EDRKTQAVDIFSLGCVFYYVLTGGSHPF 715 (903)
T ss_pred ccccCcccchhhcCceEEEEecCCccCC
Confidence 34445578999999999999988 6773
No 473
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=31.47 E-value=58 Score=32.13 Aligned_cols=24 Identities=17% Similarity=0.390 Sum_probs=20.9
Q ss_pred CCCcceeehhhhhhcccCCCCCcc
Q 011044 388 TNGDIYNFGIMIMETFTAKKPTDE 411 (495)
Q Consensus 388 ~~~dvysfgilllE~~tgk~p~~~ 411 (495)
...|-||+||+|.-++-|-.|.|.
T Consensus 232 PEVDsWsLGvLLYtLVyGtMPFDG 255 (668)
T KOG0611|consen 232 PEVDSWSLGVLLYTLVYGTMPFDG 255 (668)
T ss_pred CccchhhHHHHHHHHhhcccccCC
Confidence 457999999999999999999663
No 474
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=31.41 E-value=34 Score=33.64 Aligned_cols=26 Identities=23% Similarity=0.448 Sum_probs=22.5
Q ss_pred cccCCCcceeehhhhhhcccCCCCCc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
.-+++.||||-||++|-+++++-|.-
T Consensus 254 ~QttaiDiws~GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 254 RQTTAIDIWSAGVILLSLLSRRYPFF 279 (418)
T ss_pred CcCCccceeeccceeehhhccccccc
Confidence 45678999999999999999998853
No 475
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=29.38 E-value=23 Score=34.82 Aligned_cols=23 Identities=26% Similarity=0.534 Sum_probs=20.4
Q ss_pred cCCCcceeehhhhhhcccCCCCC
Q 011044 387 STNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 387 ~~~~dvysfgilllE~~tgk~p~ 409 (495)
....|=|.|||++.||+-|+.|.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPF 335 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPF 335 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCc
Confidence 45689999999999999999994
No 476
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=28.00 E-value=38 Score=34.51 Aligned_cols=24 Identities=17% Similarity=0.372 Sum_probs=20.9
Q ss_pred ccCCCcceeehhhhhhcccCCCCC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~ 409 (495)
-...+|-||.|+++.||+.|=.|.
T Consensus 365 Y~~~cDwWSLG~ImyEmLvGyPPF 388 (550)
T KOG0605|consen 365 YGKECDWWSLGCIMYEMLVGYPPF 388 (550)
T ss_pred CCccccHHHHHHHHHHHHhCCCCC
Confidence 345689999999999999999983
No 477
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=27.29 E-value=44 Score=36.26 Aligned_cols=77 Identities=17% Similarity=0.218 Sum_probs=47.1
Q ss_pred cccCCCcceeehhhhhhcccCCCCCccccCCCCCHHHHHHHHhCCCcceeeeccccccccccccchhhHHHHHHHHHhhc
Q 011044 385 RVSTNGDIYNFGIMIMETFTAKKPTDEIFNGEMTLRRWVNDLLSISVMEVVDANLLSWKDKHFMTKEQCMSFVFNLAMEC 464 (495)
Q Consensus 385 ~~~~~~dvysfgilllE~~tgk~p~~~~~~~~~~l~~wv~~~~~~~~~~v~d~~l~~~~~~~~~~~~~~~~~~~~~~~~C 464 (495)
....++|+||.||..+||-.|+.|.-.+.. ++-++...-- =.|.+.+... | -.+......-|
T Consensus 204 tyd~R~D~WsLGITaIEladG~PPl~DmHP--------mraLF~IpRN--PPPkLkrp~k----W----s~~FndFIs~c 265 (953)
T KOG0587|consen 204 TYDYRSDLWSLGITAIEMAEGAPPLCDMHP--------MRALFLIPRN--PPPKLKRPKK----W----SKKFNDFISTC 265 (953)
T ss_pred CcccccchhhccceeehhcCCCCCccCcch--------hhhhccCCCC--CCccccchhh----H----HHHHHHHHHHH
Confidence 345679999999999999999988543321 2222211000 0122322211 1 12255667789
Q ss_pred CCCCccCchhHHHHH
Q 011044 465 TVESPIRESTQRKLL 479 (495)
Q Consensus 465 ~~~~p~~Rp~m~~v~ 479 (495)
...+-..||+|.+.+
T Consensus 266 L~Kd~e~RP~~~~ll 280 (953)
T KOG0587|consen 266 LVKDYEQRPSTEELL 280 (953)
T ss_pred HhhccccCcchhhhc
Confidence 999999999999875
No 478
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=26.51 E-value=24 Score=33.53 Aligned_cols=37 Identities=19% Similarity=0.442 Sum_probs=26.0
Q ss_pred CCcceeehhhhhhcccCCCCCcccc--CCCCCHHHHHHH
Q 011044 389 NGDIYNFGIMIMETFTAKKPTDEIF--NGEMTLRRWVND 425 (495)
Q Consensus 389 ~~dvysfgilllE~~tgk~p~~~~~--~~~~~l~~wv~~ 425 (495)
..|-|.+||+++||..|+.|.|-.- ..+++-.+++-+
T Consensus 431 svdwwalgvlmfemmagrspfdivgm~n~d~ntedylfq 469 (593)
T KOG0695|consen 431 SVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQ 469 (593)
T ss_pred eehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHH
Confidence 3688999999999999999987432 223444455433
No 479
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=26.23 E-value=38 Score=35.84 Aligned_cols=26 Identities=15% Similarity=0.276 Sum_probs=21.8
Q ss_pred cCCCcceeehhhhhhcccCCCCCccc
Q 011044 387 STNGDIYNFGIMIMETFTAKKPTDEI 412 (495)
Q Consensus 387 ~~~~dvysfgilllE~~tgk~p~~~~ 412 (495)
+...||||.||+...|++|+-|+-..
T Consensus 503 pr~vDiwS~~ii~~~m~~~~~~Wk~a 528 (601)
T KOG0590|consen 503 PRAVDVWSCGIIYICMILGRFPWKVA 528 (601)
T ss_pred cchhhhhhccceEEEEecCCCccccc
Confidence 34589999999999999999987543
No 480
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=25.48 E-value=23 Score=33.29 Aligned_cols=22 Identities=23% Similarity=0.460 Sum_probs=19.6
Q ss_pred CCCcceeehhhhhhcccCCCCC
Q 011044 388 TNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 388 ~~~dvysfgilllE~~tgk~p~ 409 (495)
...|=|+|||++.||+.|..|.
T Consensus 220 kavDWWalGVLIYEMlaG~pPF 241 (355)
T KOG0616|consen 220 KAVDWWALGVLIYEMLAGYPPF 241 (355)
T ss_pred cchhHHHHHHHHHHHHcCCCCC
Confidence 3578999999999999999994
No 481
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=24.57 E-value=32 Score=34.95 Aligned_cols=22 Identities=32% Similarity=0.537 Sum_probs=19.8
Q ss_pred CCCcceeehhhhhhcccCCCCC
Q 011044 388 TNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 388 ~~~dvysfgilllE~~tgk~p~ 409 (495)
...|.|++||++-|++||+.|.
T Consensus 598 ~avDyWaLGIli~ELL~G~pPF 619 (732)
T KOG0614|consen 598 RAVDYWALGILIYELLTGSPPF 619 (732)
T ss_pred hhhHHHHHHHHHHHHHcCCCCC
Confidence 3579999999999999999994
No 482
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=24.49 E-value=60 Score=30.26 Aligned_cols=24 Identities=17% Similarity=0.307 Sum_probs=20.7
Q ss_pred ccCCCcceeehhhhhhcccCCCCC
Q 011044 386 VSTNGDIYNFGIMIMETFTAKKPT 409 (495)
Q Consensus 386 ~~~~~dvysfgilllE~~tgk~p~ 409 (495)
.+...|.|++||++.-++.|..|.
T Consensus 205 Ys~EVD~Wa~GVImyTLLaGcpPF 228 (411)
T KOG0599|consen 205 YSKEVDEWACGVIMYTLLAGCPPF 228 (411)
T ss_pred ccchhhHHHHHHHHHHHHcCCCch
Confidence 355689999999999999998883
No 483
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only]
Probab=23.31 E-value=1.2e+02 Score=27.08 Aligned_cols=12 Identities=25% Similarity=0.418 Sum_probs=4.9
Q ss_pred CCCEEEccCCCC
Q 011044 177 KLTRLNLRQNKL 188 (495)
Q Consensus 177 ~L~~L~L~~n~l 188 (495)
+|+--+|.++.+
T Consensus 217 NLeganLkG~~~ 228 (302)
T KOG1665|consen 217 NLEGANLKGADM 228 (302)
T ss_pred cccccccccccc
Confidence 344444444433
No 484
>PF05953 Allatostatin: Allatostatin; InterPro: IPR010276 This family consists of allatostatins, bombystatins, helicostatins, cydiastatins and schistostatin from several insect species. Allatostatins (ASTs) of the Tyr/Phe-Xaa-Phe-Gly Leu/Ile-NH2 family are a group of insect neuropeptides that inhibit juvenile hormone biosynthesis by the corpora allata [].; GO: 0005184 neuropeptide hormone activity
Probab=23.16 E-value=35 Score=14.85 Aligned_cols=8 Identities=38% Similarity=1.136 Sum_probs=5.0
Q ss_pred Ccceeehh
Q 011044 390 GDIYNFGI 397 (495)
Q Consensus 390 ~dvysfgi 397 (495)
...|+||.
T Consensus 3 ~~~Y~FGL 10 (11)
T PF05953_consen 3 SPMYSFGL 10 (11)
T ss_pred CCccccCc
Confidence 34588874
No 485
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=20.84 E-value=40 Score=33.80 Aligned_cols=32 Identities=16% Similarity=0.282 Sum_probs=25.2
Q ss_pred hcCCCccccCCCcceeehhhhhhcccCCCCCc
Q 011044 379 EYGREGRVSTNGDIYNFGIMIMETFTAKKPTD 410 (495)
Q Consensus 379 ~~~~~~~~~~~~dvysfgilllE~~tgk~p~~ 410 (495)
|--..++.+...|-|++||++.||+.|+.|..
T Consensus 356 Evl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr 387 (591)
T KOG0986|consen 356 EVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFR 387 (591)
T ss_pred HHHcCCcccCCccHHHHHhHHHHHHcccCchh
Confidence 33444556667899999999999999999953
Done!