Query 011045
Match_columns 495
No_of_seqs 301 out of 1690
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 19:39:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011045.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011045hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 5.4E-63 1.8E-67 517.2 29.5 337 140-493 5-398 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 2.6E-58 8.9E-63 481.0 30.6 331 142-495 8-394 (403)
3 3psg_A Pepsinogen; hydrolase(a 100.0 6.7E-57 2.3E-61 465.0 31.1 301 143-494 45-370 (370)
4 1tzs_A Cathepsin E; hydrolase, 100.0 1.4E-55 4.8E-60 452.2 31.1 304 144-495 13-343 (351)
5 1dpj_A Proteinase A; proteinas 100.0 8.9E-56 3E-60 449.6 29.0 299 145-494 4-329 (329)
6 1mpp_A Pepsin; hydrolase(acid 100.0 6.7E-56 2.3E-60 456.2 28.1 311 140-495 4-356 (361)
7 2apr_A Rhizopuspepsin; hydrola 100.0 1.2E-55 4.1E-60 448.1 29.0 292 155-494 13-324 (325)
8 3c9x_A Trichoderma reesei aspa 100.0 6.1E-56 2.1E-60 450.9 26.8 294 155-493 13-329 (329)
9 3cms_A Chymosin B; hydrolase, 100.0 1.3E-55 4.4E-60 447.4 26.5 297 144-494 4-323 (323)
10 2x0b_A Renin; hydrolase-hormon 100.0 7.4E-56 2.5E-60 458.7 25.0 300 144-494 51-383 (383)
11 1htr_B Gastricsin; aspartyl pr 100.0 2.5E-55 8.6E-60 446.3 26.8 299 146-494 5-329 (329)
12 1am5_A Pepsin, acid proteinase 100.0 3.3E-55 1.1E-59 444.5 27.6 298 144-494 2-324 (324)
13 4aa9_A Chymosin; hydrolase, as 100.0 1.5E-55 5E-60 446.2 24.8 297 146-494 3-320 (320)
14 1oew_A Endothiapepsin; hydrola 100.0 1.6E-55 5.6E-60 447.8 25.0 293 155-493 13-329 (329)
15 1j71_A Candidapepsin, aspartic 100.0 5.9E-55 2E-59 444.5 26.1 295 144-495 3-325 (334)
16 1t6e_X Xylanase inhibitor; two 100.0 2.2E-54 7.4E-59 448.1 29.3 318 144-494 3-373 (381)
17 2qzx_A Candidapepsin-5; aspart 100.0 1.1E-54 3.6E-59 444.0 26.0 298 144-495 3-332 (342)
18 3fv3_A SAPP1P-secreted asparti 100.0 2.1E-54 7.1E-59 441.2 27.2 296 144-495 3-330 (339)
19 3k1w_A Renin; protease, altern 100.0 1.2E-54 4.1E-59 443.2 25.2 303 141-494 5-340 (341)
20 1qdm_A Prophytepsin; aspartic 100.0 1.6E-53 5.5E-58 452.9 33.9 313 144-494 42-478 (478)
21 1miq_A Plasmepsin; aspartic pr 100.0 7.1E-54 2.4E-58 443.2 29.1 297 144-494 52-374 (375)
22 2bju_A Plasmepsin II; aspartic 100.0 6E-54 2E-58 452.2 25.2 298 144-494 128-450 (453)
23 1ibq_A Aspergillopepsin; aspar 100.0 1.9E-53 6.3E-58 432.0 27.6 291 155-494 12-325 (325)
24 3pvk_A Candidapepsin-2; hydrol 100.0 1.3E-53 4.3E-58 435.8 25.2 299 144-495 3-332 (342)
25 1yg9_A Aspartic protease BLA G 100.0 2.3E-53 7.9E-58 432.2 26.6 298 144-494 7-329 (330)
26 1izd_A Aspartic proteinase; su 100.0 1.9E-53 6.6E-58 431.5 25.8 289 155-494 13-323 (323)
27 2ewy_A Beta-secretase 2; BACE2 100.0 7.1E-53 2.4E-57 436.9 27.5 306 156-495 12-356 (383)
28 3qvc_A Histo-aspartic protease 100.0 4.3E-53 1.5E-57 446.0 25.9 298 143-494 126-449 (451)
29 1bxo_A Protein (penicillopepsi 100.0 1.3E-53 4.3E-58 432.8 21.0 289 155-494 13-323 (323)
30 2qp8_A Beta-secretase 1; BACE1 100.0 9.8E-53 3.4E-57 437.7 26.1 307 156-495 20-368 (395)
31 3vf3_A Beta-secretase 1; struc 100.0 1.4E-51 4.8E-56 429.9 28.2 308 156-495 27-375 (402)
32 3lpj_A Beta-secretase 1; alzhe 100.0 1.2E-51 4.2E-56 437.0 27.0 307 156-495 73-421 (455)
33 1wkr_A Polyporopepsin; hydrola 100.0 3.3E-51 1.1E-55 417.8 27.2 292 145-495 4-334 (340)
34 1b5f_A Protein (cardosin A); h 100.0 8E-41 2.8E-45 324.7 19.3 216 145-397 4-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 3.1E-35 1E-39 285.4 21.2 213 258-494 2-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 8.4E-22 2.9E-26 163.7 9.4 88 145-256 4-95 (97)
37 1b5f_B Protein (cardosin A); h 99.7 1.3E-16 4.3E-21 129.7 7.8 78 416-494 4-87 (87)
38 2i1a_A DNA damage-inducible pr 92.9 0.29 9.8E-06 42.4 7.7 108 339-491 25-134 (148)
39 3s8i_A Protein DDI1 homolog 1; 92.2 0.21 7E-06 43.8 5.8 109 339-492 23-134 (148)
40 2i1a_A DNA damage-inducible pr 92.2 0.19 6.6E-06 43.6 5.7 30 156-187 24-53 (148)
41 1fmb_A EIAV protease; hydrolas 80.2 1.7 5.8E-05 35.5 4.2 26 159-186 9-34 (104)
42 2hs1_A HIV-1 protease; ultra-h 79.9 2.1 7.1E-05 34.6 4.6 28 159-188 9-36 (99)
43 3ec0_A Protease; HIV-2, inhibi 75.3 3.5 0.00012 33.3 4.6 28 159-188 9-36 (99)
44 3liy_A Protease; hydrolase, hy 70.9 3.8 0.00013 33.8 3.9 32 159-190 11-45 (116)
45 2hah_A Protease, retropepsin; 69.1 4.4 0.00015 33.7 4.0 27 159-188 15-41 (116)
46 3s8i_A Protein DDI1 homolog 1; 64.0 6.3 0.00021 34.1 4.2 31 156-188 22-52 (148)
47 3sqf_A Protease; folded monome 62.4 7.9 0.00027 32.0 4.2 29 159-189 10-38 (114)
48 1lya_A Cathepsin D; lysosomal 57.0 12 0.00041 29.7 4.4 41 328-386 4-44 (97)
49 3slz_A GAG-Pro-POL polyprotein 48.5 20 0.00069 30.3 4.6 29 158-188 22-50 (132)
50 2rsp_A RSV protease; hydrolase 46.7 20 0.00067 30.1 4.2 23 165-189 27-49 (124)
51 3ka2_A [L-Ala51;Gly51']HIV-1 p 44.8 18 0.00062 33.0 4.0 27 159-187 9-35 (203)
52 1bxo_A Protein (penicillopepsi 33.5 40 0.0014 32.5 4.8 33 338-388 14-46 (323)
53 1izd_A Aspartic proteinase; su 32.8 42 0.0014 32.4 4.8 33 338-388 14-46 (323)
54 1ibq_A Aspergillopepsin; aspar 31.8 43 0.0015 32.3 4.7 33 338-388 13-45 (325)
55 1j71_A Candidapepsin, aspartic 29.7 56 0.0019 31.6 5.2 40 328-386 4-43 (334)
56 3aup_A SBG7S, BG, basic 7S glo 29.6 54 0.0019 32.7 5.2 42 328-386 11-52 (403)
57 2qzx_A Candidapepsin-5; aspart 29.3 63 0.0022 31.3 5.5 38 328-386 4-43 (342)
58 3fv3_A SAPP1P-secreted asparti 29.1 58 0.002 31.4 5.2 38 328-386 4-43 (339)
59 1wkr_A Polyporopepsin; hydrola 27.8 57 0.002 31.6 4.8 37 328-385 4-42 (340)
60 1b5f_A Protein (cardosin A); h 27.6 54 0.0018 30.1 4.4 40 329-386 5-44 (239)
61 3ka2_A [L-Ala51;Gly51']HIV-1 p 26.4 55 0.0019 29.7 4.0 27 159-187 113-139 (203)
62 1mpp_A Pepsin; hydrolase(acid 25.9 81 0.0028 30.7 5.6 42 325-386 6-49 (361)
63 3c9x_A Trichoderma reesei aspa 25.9 82 0.0028 30.3 5.6 33 338-388 14-48 (329)
64 3pvk_A Candidapepsin-2; hydrol 25.5 73 0.0025 30.7 5.2 33 338-386 11-43 (342)
65 3cms_A Chymosin B; hydrolase, 24.9 84 0.0029 30.1 5.4 42 327-386 4-45 (323)
66 2apr_A Rhizopuspepsin; hydrola 24.0 62 0.0021 31.1 4.3 31 338-386 14-46 (325)
67 1oew_A Endothiapepsin; hydrola 23.9 94 0.0032 29.9 5.6 32 338-387 14-47 (329)
68 3vla_A EDGP; extracellular, in 23.0 84 0.0029 31.6 5.2 44 325-385 7-50 (413)
69 1am5_A Pepsin, acid proteinase 22.3 98 0.0033 29.6 5.3 40 329-386 4-43 (324)
70 1dpj_A Proteinase A; proteinas 20.1 84 0.0029 30.2 4.3 16 372-387 30-45 (329)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=5.4e-63 Score=517.25 Aligned_cols=337 Identities=24% Similarity=0.462 Sum_probs=286.8
Q ss_pred CCCceeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccc
Q 011045 140 LPEDFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQC 219 (495)
Q Consensus 140 ~~~~~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C 219 (495)
+...+..||..+. .+++|+++|.||||||++.|+|||||+++||+|.+| .+|+||+.+.|.++.|
T Consensus 5 ~~~~~~~pv~~d~--~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C 69 (413)
T 3vla_A 5 RPSALVVPVKKDA--STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQC 69 (413)
T ss_dssp CCSEEEEEEEECT--TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHH
T ss_pred CCccEEEEeeecC--CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCcccc
Confidence 4567889999885 579999999999999999999999999999999875 2799999999999999
Q ss_pred cCCCCC-----------CcCCCCcceeeecC-CCceEEEEEEEEEEEECC--------CccccceEEeEEecC--CCCcc
Q 011045 220 KSLDVS-----------ACRANRCLYQVAYG-DGSFTVGDLVTETVSFGN--------SGSVKGIALGCGHDN--EGLFV 277 (495)
Q Consensus 220 ~~~~~~-----------~C~~~~c~y~~~Yg-dgs~~~G~~~~Dtlt~g~--------~~~v~~~~fG~~~~~--~g~~~ 277 (495)
...... .|.++.|.|.+.|+ |++.+.|++++|+|+|+. ...++++.|||++.+ .+.+.
T Consensus 70 ~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~ 149 (413)
T 3vla_A 70 SLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLAS 149 (413)
T ss_dssp HHTTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCT
T ss_pred cccccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCccc
Confidence 876433 35555699999995 888788999999999962 257889999999986 45567
Q ss_pred CcceeEeccCCCCCcccccC-----CCeEEEEecCCCCCCcceEEeccCCC---------CC-ceeeeeecCCCC-----
Q 011045 278 GSAGLLGLGGGMLSLTKQIK-----ATSLAYCLVDRDSPASGVLEFNSARG---------GD-AVTAPLIRNKKV----- 337 (495)
Q Consensus 278 ~~~GIlGLg~~~~S~~sQl~-----~~~FS~~L~~~~~~~~g~L~fGg~d~---------~~-~~~tpl~~~~~~----- 337 (495)
.++||||||++++|+++||. .++|||||.+. ....|.|+||+.+. ++ ++|+||+.++..
T Consensus 150 ~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~-~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~ 228 (413)
T 3vla_A 150 GVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGS-TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATS 228 (413)
T ss_dssp TCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSC-SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSC
T ss_pred ccccccccCCCCcchHHHHhhhcCCCceEEEeCCCC-CCCceEEEECCCcccccccccccCCceeEeecccCCccccccc
Confidence 79999999999999999987 48999999874 34479999999874 15 999999987533
Q ss_pred -----CeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhc--CCCCCCCCcc
Q 011045 338 -----DTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAG--NLKPTSGVAL 410 (495)
Q Consensus 338 -----~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~--~~~~~~~~~~ 410 (495)
..+|+|+|++|+||++.+.+++..|..+.++++++||||||++|+||+++|++|+++|++.+. ++++..+...
T Consensus 229 ~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~ 308 (413)
T 3vla_A 229 TQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAP 308 (413)
T ss_dssp CTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTT
T ss_pred cccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCC
Confidence 279999999999999999999888888777788999999999999999999999999998864 4444444445
Q ss_pred cccccccCCCcc----cccceEEEEEcC-CcEEEeCCCCceEEecCCCcEEEEEEecC---CCceeecHHhhcceEEEEe
Q 011045 411 FDTCYDFSGLRS----VRVPTVSLHFGA-GKALDLPAKNYLIPVDSAGTFCFAFAPTS---SALSIIGNVQQQGTRVSFD 482 (495)
Q Consensus 411 ~~~C~~~~~~~~----~~~P~ltf~f~g-g~~~~lp~~~y~~~~~~~g~~Cl~~~~~~---~~~~IlG~~fl~~~yvvfD 482 (495)
++.||++++... ..+|+|+|+|.| ++.|+|++++|+++.+ ++..|++|...+ ++.||||+.|||++|+|||
T Consensus 309 ~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~-~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD 387 (413)
T 3vla_A 309 FGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIN-DNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFD 387 (413)
T ss_dssp CSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEE-TTEEEECEEEEESSCSSSEEECHHHHTTEEEEEE
T ss_pred CcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeC-CCcEEEEEEecCCCcccceeEehhhhcCeEEEEE
Confidence 788999876532 479999999954 3899999999999876 477899888753 2579999999999999999
Q ss_pred CCCCEEEEeeC
Q 011045 483 LANNRVGFTPN 493 (495)
Q Consensus 483 ~~~~rIGFa~~ 493 (495)
++++|||||++
T Consensus 388 ~~~~riGfa~~ 398 (413)
T 3vla_A 388 LATSRVGFSGT 398 (413)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCEEEEEEe
Confidence 99999999985
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2.6e-58 Score=480.97 Aligned_cols=331 Identities=21% Similarity=0.384 Sum_probs=264.3
Q ss_pred CceeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccC
Q 011045 142 EDFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKS 221 (495)
Q Consensus 142 ~~~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~ 221 (495)
..+..||.... .+++|+++|.||||+|++.|+|||||+++||+|.+| .+|+||+.+.|.++.|..
T Consensus 8 ~~~~~pl~~~~--~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~-------------~~Sst~~~~~C~s~~C~~ 72 (403)
T 3aup_A 8 NLVVLPVQNDG--STGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ-------------YSSKTYQAPFCHSTQCSR 72 (403)
T ss_dssp CCEEEEEEECT--TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC-------------CCCSSCBCCCTTBHHHHH
T ss_pred ccEEEeeecCC--CCceEEEEEECCCCCceeEEEEECCCCceeECCCCC-------------CCCCCCCccCCCCccccC
Confidence 45678988432 478999999999999999999999999999999874 379999999999999976
Q ss_pred CCC-----------CCcCCCCcceeeecC-CCceEEEEEEEEEEEECCC-----------ccccceEEeEEecCC---CC
Q 011045 222 LDV-----------SACRANRCLYQVAYG-DGSFTVGDLVTETVSFGNS-----------GSVKGIALGCGHDNE---GL 275 (495)
Q Consensus 222 ~~~-----------~~C~~~~c~y~~~Yg-dgs~~~G~~~~Dtlt~g~~-----------~~v~~~~fG~~~~~~---g~ 275 (495)
... ..|.++.|.|.+.|+ |++.+.|.+++|+|+|+ + ..++++.|||++... +.
T Consensus 73 ~~~~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig-~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~ 151 (403)
T 3aup_A 73 ANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIH-ATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGL 151 (403)
T ss_dssp TTCCCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEE-ECCC----CCCEEEEEEEEEEEECGGGGSSSS
T ss_pred ccccCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEec-ccCCccccccccccccCEEEECCcccccccCC
Confidence 543 246555699999998 78888899999999998 5 688999999999864 33
Q ss_pred ccCcceeEeccCCCCCcccccC-----CCeEEEEecCCCCCCcceEEeccCCC-------C-----CceeeeeecCCCCC
Q 011045 276 FVGSAGLLGLGGGMLSLTKQIK-----ATSLAYCLVDRDSPASGVLEFNSARG-------G-----DAVTAPLIRNKKVD 338 (495)
Q Consensus 276 ~~~~~GIlGLg~~~~S~~sQl~-----~~~FS~~L~~~~~~~~g~L~fGg~d~-------~-----~~~~tpl~~~~~~~ 338 (495)
+..++||||||++.+|+++|+. .++|||||.+. ....|.|+||+ |+ + ++.|+|++.++ .
T Consensus 152 ~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~--~ 227 (403)
T 3aup_A 152 PRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRY-PTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL--Q 227 (403)
T ss_dssp STTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSC-TTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT--T
T ss_pred CCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCC-CCCCeeEEECC-CchhccccccccccCceeecccccCC--C
Confidence 4678999999999999999875 58999999764 23489999999 52 2 79999999864 3
Q ss_pred eeEEEEeeeeEecCeee-ecCCCccccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCccccccccc
Q 011045 339 TFYYVGLTGFSVGGQAV-QIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDF 417 (495)
Q Consensus 339 ~~y~V~l~gIsVgg~~~-~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~ 417 (495)
++|+|.|++|+||++.+ .++...+.++..+.+++||||||++++||+++|++|+++|.+.+..++.......++.||+
T Consensus 228 ~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~- 306 (403)
T 3aup_A 228 GEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFN- 306 (403)
T ss_dssp SCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEEC-
T ss_pred CcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEE-
Confidence 69999999999999998 7887777776677889999999999999999999999999876543333222223456875
Q ss_pred CCCcccccceEEEEEcCC--cEEEeCCCCceEEecCCCcEEEEEEecC---CCceeecHHhhcceEEEEeCCCCEEEE--
Q 011045 418 SGLRSVRVPTVSLHFGAG--KALDLPAKNYLIPVDSAGTFCFAFAPTS---SALSIIGNVQQQGTRVSFDLANNRVGF-- 490 (495)
Q Consensus 418 ~~~~~~~~P~ltf~f~gg--~~~~lp~~~y~~~~~~~g~~Cl~~~~~~---~~~~IlG~~fl~~~yvvfD~~~~rIGF-- 490 (495)
|.....+|+|+|+|.|+ ++|+|++++|+++.. ++..|++|+..+ .+.||||+.|||++|+|||++++||||
T Consensus 307 -c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~-~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A 384 (403)
T 3aup_A 307 -SNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQ-PGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFST 384 (403)
T ss_dssp -GGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC----CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEES
T ss_pred -CCCcCcCCcEEEEEcCCCceEEEEcccceEEEcC-CCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEec
Confidence 44444799999999554 699999999999865 467899998764 257999999999999999999999999
Q ss_pred -----eeCCC
Q 011045 491 -----TPNKC 495 (495)
Q Consensus 491 -----a~~~C 495 (495)
++++|
T Consensus 385 ~~~~~~~~~C 394 (403)
T 3aup_A 385 SSLHSHGVKC 394 (403)
T ss_dssp SCGGGGTCCG
T ss_pred ccccccCCCc
Confidence 66666
No 3
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=6.7e-57 Score=465.03 Aligned_cols=301 Identities=24% Similarity=0.387 Sum_probs=253.8
Q ss_pred ceeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCC
Q 011045 143 DFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSL 222 (495)
Q Consensus 143 ~~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~ 222 (495)
....|+.+. .+.+|+++|.||||||++.|++||||+++||+|..|..|.|+.++.|||++|+||+..+
T Consensus 45 ~~~~~l~n~---~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~--------- 112 (370)
T 3psg_A 45 IGDEPLENY---LDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS--------- 112 (370)
T ss_dssp SCCCTTGGG---TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE---------
T ss_pred cceecceec---cCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECC---------
Confidence 345677764 47899999999999999999999999999999999998888889999999999999887
Q ss_pred CCCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCC-c--cCcceeEeccCCCCCccc-----
Q 011045 223 DVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGL-F--VGSAGLLGLGGGMLSLTK----- 294 (495)
Q Consensus 223 ~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~-~--~~~~GIlGLg~~~~S~~s----- 294 (495)
|.|.+.|++|+. .|.+++|+|+|+ +..++++.|||++...+. | ..++||||||++.++...
T Consensus 113 ---------~~~~i~Yg~Gs~-~G~~~~Dtv~ig-~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~ 181 (370)
T 3psg_A 113 ---------QELSITYGTGSM-TGILGYDTVQVG-GISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVF 181 (370)
T ss_dssp ---------EEEEEESSSCEE-EEEEEEEEEEET-TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHH
T ss_pred ---------cEEEEEeCCceE-EEEEEEEEEeeC-CcccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHH
Confidence 899999999995 599999999999 999999999999988763 3 568999999998876432
Q ss_pred -----c--cCCCeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccc
Q 011045 295 -----Q--IKATSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFE 363 (495)
Q Consensus 295 -----Q--l~~~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~ 363 (495)
| +..++||+||.+. ....|.|+|||+|+. ++.|+|+... ++|.|.|++|+||++.+..
T Consensus 182 ~~l~~qg~i~~~~FS~~L~~~-~~~~G~l~fGg~D~~~y~g~l~~~pv~~~----~~w~v~l~~i~v~g~~~~~------ 250 (370)
T 3psg_A 182 DNLWDQGLVSQDLFSVYLSSN-DDSGSVVLLGGIDSSYYTGSLNWVPVSVE----GYWQITLDSITMDGETIAC------ 250 (370)
T ss_dssp HHHHHTTCSSSSEEEEEEC------CEEEEETCCCGGGBSSCCEEEECSEE----TTEEEEECEEESSSSEEEC------
T ss_pred HHHHHCCCCCCCEEEEEEccC-CCCCeEEEEEeeChHhcCCcceeeccccc----ceeEEEEeEEEECCEEEec------
Confidence 2 4579999999765 334899999999975 8999999864 7899999999999987753
Q ss_pred cccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCCC
Q 011045 364 MDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAK 443 (495)
Q Consensus 364 ~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~~ 443 (495)
.+.+.+||||||++++||.+++++|.+++++.. ...+ +|.++|.....+|+|+|+| ||++++||++
T Consensus 251 ---~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~----~~~g------~~~v~C~~~~~lP~i~f~~-~g~~~~l~~~ 316 (370)
T 3psg_A 251 ---SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE----NSDG------EMVISCSSIDSLPDIVFTI-DGVQYPLSPS 316 (370)
T ss_dssp ---TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE----CTTC------CEECCGGGGGGCCCEEEEE-TTEEEEECHH
T ss_pred ---CCCceEEEcCCCCcEECCHHHHHHHHHHhCCcc----cCCC------cEEEECCCcccCCcEEEEE-CCEEEEECHH
Confidence 234679999999999999999999999987542 1222 3455566567899999999 8999999999
Q ss_pred CceEEecCCCcEEE-EEEecC-----CCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 444 NYLIPVDSAGTFCF-AFAPTS-----SALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 444 ~y~~~~~~~g~~Cl-~~~~~~-----~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
+|+++ . +..|+ +|.+.+ +..||||++|||++|+|||++++|||||+++
T Consensus 317 ~yi~~-~--~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 317 AYILQ-D--DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp HHEEE-C--SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred Hhccc-C--CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 99998 3 33598 677642 3369999999999999999999999999975
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.4e-55 Score=452.17 Aligned_cols=304 Identities=25% Similarity=0.409 Sum_probs=251.0
Q ss_pred eeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCC
Q 011045 144 FSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLD 223 (495)
Q Consensus 144 ~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~ 223 (495)
...|+.+. .+++|+++|.||||+|++.|++||||+++||+|..|..+.|..++.|||++|+||+...
T Consensus 13 ~~~~l~n~---~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~---------- 79 (351)
T 1tzs_A 13 AKEPLINY---LDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPG---------- 79 (351)
T ss_dssp -CCTTGGG---SSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCBCCS----------
T ss_pred cceeceec---CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCCCcCCcccCcceEECC----------
Confidence 45677752 46899999999999999999999999999999999984334467899999999999887
Q ss_pred CCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCC-c--cCcceeEeccCCCCCcc-------
Q 011045 224 VSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGL-F--VGSAGLLGLGGGMLSLT------- 293 (495)
Q Consensus 224 ~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~-~--~~~~GIlGLg~~~~S~~------- 293 (495)
|.|.+.|++|+. .|.+++|+|+|+ +..++++.|||++...+. | ...+||||||++.++..
T Consensus 80 --------~~~~i~Yg~Gs~-~G~~~~D~v~ig-~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 149 (351)
T 1tzs_A 80 --------QSFSIQYGTGSL-SGIIGADQVSVE-GLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFD 149 (351)
T ss_dssp --------CEEEEESSSCEE-EEEEEEEEEEET-TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHH
T ss_pred --------CEEEEEeCCCCe-EEEEEEeEEEEC-CeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHH
Confidence 899999999985 599999999999 899999999999987764 2 46899999999987643
Q ss_pred ---cc--cCCCeEEEEecCCCCC-CcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccc
Q 011045 294 ---KQ--IKATSLAYCLVDRDSP-ASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFE 363 (495)
Q Consensus 294 ---sQ--l~~~~FS~~L~~~~~~-~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~ 363 (495)
.| +..++||+||.+.... ..|.|+||++|+. ++.|+|+... .+|.|.|++|+||++.+..
T Consensus 150 ~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~------ 219 (351)
T 1tzs_A 150 NMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ----AYWQIALDNIQVGGTVMFC------ 219 (351)
T ss_dssp HHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE----TTEEEEEEEEEETTEEEEC------
T ss_pred HHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC----ceEEEEeCEEEECCceEEc------
Confidence 23 4589999999765322 2799999999975 8999999863 7999999999999987642
Q ss_pred cccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCCC
Q 011045 364 MDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAK 443 (495)
Q Consensus 364 ~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~~ 443 (495)
.....+||||||++++||.++|++|.+++++... . +. +...|+. ...+|+|+|+| +|++++||++
T Consensus 220 ---~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~----~-g~-~~~~C~~-----~~~~P~i~f~f-~g~~~~i~~~ 284 (351)
T 1tzs_A 220 ---SEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV----D-GE-YAVECAN-----LNVMPDVTFTI-NGVPYTLSPT 284 (351)
T ss_dssp ---TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC----S-SS-EEECGGG-----GGGSCCEEEEE-TTEEEEECTT
T ss_pred ---CCCceEEeccCCcceeCCHHHHHHHHHHhCCccc----C-Ce-EEEeCCC-----CccCCcEEEEE-CCEEEEECHH
Confidence 2346799999999999999999999999975422 1 22 2334654 45789999999 8999999999
Q ss_pred CceEEecCC-CcEEE-EEEec-----CCCceeecHHhhcceEEEEeCCCCEEEEeeCCC
Q 011045 444 NYLIPVDSA-GTFCF-AFAPT-----SSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC 495 (495)
Q Consensus 444 ~y~~~~~~~-g~~Cl-~~~~~-----~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 495 (495)
+|+++.... +..|+ +|.+. ..+.||||+.|||++|+|||++++|||||+++|
T Consensus 285 ~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~ 343 (351)
T 1tzs_A 285 AYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVP 343 (351)
T ss_dssp TSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC-
T ss_pred HhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCc
Confidence 999975432 35898 68765 246799999999999999999999999999987
No 5
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=8.9e-56 Score=449.65 Aligned_cols=299 Identities=24% Similarity=0.437 Sum_probs=252.4
Q ss_pred eeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCC
Q 011045 145 STPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDV 224 (495)
Q Consensus 145 ~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~ 224 (495)
++|+.+. .+++|+++|.||||+|++.|++||||+++||+|.+|..|.|..++.|||++|+||+...
T Consensus 4 ~~~l~~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~----------- 69 (329)
T 1dpj_A 4 DVPLTNY---LNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKANG----------- 69 (329)
T ss_dssp EEECEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE-----------
T ss_pred ceeeeec---CCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCcCcCCcccCcCeEECC-----------
Confidence 5677653 36899999999999999999999999999999999997444467899999999999866
Q ss_pred CCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCC-Cc--cCcceeEeccCCCCCccc-------
Q 011045 225 SACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEG-LF--VGSAGLLGLGGGMLSLTK------- 294 (495)
Q Consensus 225 ~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g-~~--~~~~GIlGLg~~~~S~~s------- 294 (495)
|.|.+.|++|+. .|.+++|+|+|+ +..++++.|||++...+ .| ...+||||||+..+++..
T Consensus 70 -------~~~~i~Yg~Gs~-~G~~~~D~v~ig-~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~ 140 (329)
T 1dpj_A 70 -------TEFAIQYGTGSL-EGYISQDTLSIG-DLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYN 140 (329)
T ss_dssp -------EEEEEEETTEEE-EEEEEEEEEEET-TEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHH
T ss_pred -------cEEEEEECCceE-EEEEEEEEEEEC-CeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHH
Confidence 899999999964 599999999999 89999999999998766 22 468999999999877542
Q ss_pred ---c--cCCCeEEEEecCCC--CCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccc
Q 011045 295 ---Q--IKATSLAYCLVDRD--SPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFE 363 (495)
Q Consensus 295 ---Q--l~~~~FS~~L~~~~--~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~ 363 (495)
| +..++||+||.+.. ....|.|+||++|+. ++.|+|+... .+|.|.|++|+||++.+..
T Consensus 141 l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~------ 210 (329)
T 1dpj_A 141 AIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK----AYWEVKFEGIGLGDEYAEL------ 210 (329)
T ss_dssp HHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB----TTBEEEEEEEEETTEEEEC------
T ss_pred HHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC----ceEEEEeeeEEECCeEecC------
Confidence 3 55799999997642 123799999999975 7999999763 7999999999999988752
Q ss_pred cccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCCC
Q 011045 364 MDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAK 443 (495)
Q Consensus 364 ~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~~ 443 (495)
....+||||||++++||+++|++|.+++++.. .. ..||.++|.....+|+|+|+| +|++++||++
T Consensus 211 ----~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~----~~------~g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~ 275 (329)
T 1dpj_A 211 ----ESHGAAIDTGTSLITLPSGLAEMINAEIGAKK----GW------TGQYTLDCNTRDNLPDLIFNF-NGYNFTIGPY 275 (329)
T ss_dssp ----SSCEEEECTTCSCEEECHHHHHHHHHHHTCEE----CT------TSSEEECGGGGGGCCCEEEEE-TTEEEEECTT
T ss_pred ----CCccEEeeCCCCcEECCHHHHHHHHHHhCCcc----CC------CCeEEEECCCCCcCCcEEEEE-CCEEEEECHH
Confidence 24679999999999999999999999986431 11 124556666667899999999 7999999999
Q ss_pred CceEEecCCCcEEE-EEEec-----CCCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 444 NYLIPVDSAGTFCF-AFAPT-----SSALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 444 ~y~~~~~~~g~~Cl-~~~~~-----~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
+|+++.. ..|+ +|.+. .++.||||+.|||++|+|||++++|||||+++
T Consensus 276 ~y~~~~~---~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 276 DYTLEVS---GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp TSEEEET---TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HhEecCC---CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 9999764 5798 78764 24579999999999999999999999999975
No 6
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=6.7e-56 Score=456.16 Aligned_cols=311 Identities=20% Similarity=0.328 Sum_probs=259.2
Q ss_pred CCCceeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCC---CccCCCCCccCCCCCCcccCCCCCC
Q 011045 140 LPEDFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCT---ECYQQSDPIFDPKTSSSYSPLPCAA 216 (495)
Q Consensus 140 ~~~~~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~---~C~~~~~~~f~p~~SsT~~~~~C~~ 216 (495)
.+.....|+.+. .+++|+++|.||||+|++.|+|||||+++||+|.+|. .|. .++.|||++|+||+...
T Consensus 4 ~g~~~~~~l~~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~--- 75 (361)
T 1mpp_A 4 DGSVDTPGLYDF---DLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCV--GKRFFDPSSSSTFKETD--- 75 (361)
T ss_dssp -CCEEEEEEEET---TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCC--SSCCBCGGGCTTCEEEE---
T ss_pred CCccceEEeecC---CCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCC--CCCcCCCccCCceEecC---
Confidence 445566788763 4689999999999999999999999999999999998 575 57899999999999876
Q ss_pred ccccCCCCCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCC------Cc--cCcceeEeccCC
Q 011045 217 PQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEG------LF--VGSAGLLGLGGG 288 (495)
Q Consensus 217 ~~C~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g------~~--~~~~GIlGLg~~ 288 (495)
|.|.+.|++|+. .|.+++|+|+|+ +..++++.|||++...+ .+ ...+||||||++
T Consensus 76 ---------------~~~~i~Yg~Gs~-~G~~~~D~v~~g-~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~ 138 (361)
T 1mpp_A 76 ---------------YNLNITYGTGGA-NGIYFRDSITVG-GATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYP 138 (361)
T ss_dssp ---------------EEEEEECSSCEE-EEEEEEEEEEET-TEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCG
T ss_pred ---------------CeEEEEECCceE-EEEEEEEEEEEC-CEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCc
Confidence 899999999995 699999999999 89999999999998765 23 468999999998
Q ss_pred CCCccc----------------c--cCCCeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEee
Q 011045 289 MLSLTK----------------Q--IKATSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLT 346 (495)
Q Consensus 289 ~~S~~s----------------Q--l~~~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~ 346 (495)
.++... | +..++||+||.+. ...|.|+||++|+. ++.|+|++.......+|.|.|+
T Consensus 139 ~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~ 216 (361)
T 1mpp_A 139 DNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN--DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVT 216 (361)
T ss_dssp GGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS--SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEE
T ss_pred ccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC--CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEe
Confidence 776543 2 4579999999764 34799999999975 8999999886432339999999
Q ss_pred eeEecCeeeecCCCccccccCCCCcEE-EccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCccccc
Q 011045 347 GFSVGGQAVQIPPSLFEMDEAGDGGII-VDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRV 425 (495)
Q Consensus 347 gIsVgg~~~~i~~~~~~~~~~~~~~~i-iDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 425 (495)
+|+|+++.+.++ ....+| |||||++++||+++|++|.+++++.. +...+. +...|+. ...+
T Consensus 217 ~i~v~~~~~~~~---------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~---~~~~g~-~~~~C~~-----~~~~ 278 (361)
T 1mpp_A 217 GVKIDGSDAVSF---------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDA---TESQQG-YTVPCSK-----YQDS 278 (361)
T ss_dssp EEEETTEEEEEE---------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTC---EEETTE-EEEEHHH-----HTTC
T ss_pred EEEECCeeeccC---------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCcc---cCCCCc-EEEECCC-----cccC
Confidence 999999886421 235689 99999999999999999999997642 222232 2345765 3467
Q ss_pred -ceEEEEEc-C-----CcEEEeCCCCceEEecCCCcEEE-EEEecCCCceeecHHhhcceEEEEeCCCCEEEEeeCCC
Q 011045 426 -PTVSLHFG-A-----GKALDLPAKNYLIPVDSAGTFCF-AFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC 495 (495)
Q Consensus 426 -P~ltf~f~-g-----g~~~~lp~~~y~~~~~~~g~~Cl-~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 495 (495)
|+|+|+|. | |++++||+++|+++...++..|+ +|.+...+.||||+.|||++|+|||++++|||||+++|
T Consensus 279 ~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~ 356 (361)
T 1mpp_A 279 KTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLAS 356 (361)
T ss_dssp CCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCT
T ss_pred CCcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEccc
Confidence 99999994 4 89999999999998653356898 88876556899999999999999999999999999998
No 7
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.2e-55 Score=448.06 Aligned_cols=292 Identities=23% Similarity=0.381 Sum_probs=246.1
Q ss_pred CceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCCCCcCCCCcce
Q 011045 155 GSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLY 234 (495)
Q Consensus 155 ~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~c~y 234 (495)
.+++|+++|.||||+|++.|++||||+++||+|.+|..| ++.++.|||++|+||+... |.|
T Consensus 13 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~~~~~y~~~~SsT~~~~~------------------~~~ 73 (325)
T 2apr_A 13 NDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GSGQTKYDPNQSSTYQADG------------------RTW 73 (325)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CTTSCCBCGGGCTTCEEEE------------------EEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hcCCCCCCcccCCCeeeCC------------------CEE
Confidence 478999999999999999999999999999999999999 8889999999999999855 899
Q ss_pred eeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCCc--cCcceeEeccCCCCCcc-------c----c--cCCC
Q 011045 235 QVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLF--VGSAGLLGLGGGMLSLT-------K----Q--IKAT 299 (495)
Q Consensus 235 ~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~~--~~~~GIlGLg~~~~S~~-------s----Q--l~~~ 299 (495)
.+.|++|+...|.+++|+|+|+ +..++++.|||++...+.| ...+||||||+..++.+ . | +..+
T Consensus 74 ~i~Yg~Gs~~~G~~~~D~v~~g-~~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~ 152 (325)
T 2apr_A 74 SISYGDGSSASGILAKDNVNLG-GLLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRP 152 (325)
T ss_dssp EEECTTSCEEEEEEEEEEEEET-TEEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSS
T ss_pred EEEECCCCCEEEEEEEEEEEEC-CEEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCc
Confidence 9999999977799999999999 8999999999999876655 34899999999877643 2 2 5589
Q ss_pred eEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEc
Q 011045 300 SLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVD 375 (495)
Q Consensus 300 ~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiD 375 (495)
+||+||.+......|.|+||++|+. ++.|+|+... .++|.|.+++|+||+ .+. .....+|||
T Consensus 153 ~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~vg~-~~~----------~~~~~~iiD 218 (325)
T 2apr_A 153 IFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNS---RGWWGITVDRATVGT-STV----------ASSFDGILD 218 (325)
T ss_dssp EEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCT---TSSCEEEECEEEETT-EEE----------ECCEEEEEC
T ss_pred eEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCC---CCEEEEEEeEEEECC-Eec----------CCCceEEEe
Confidence 9999996543345799999999965 8999999753 478999999999999 332 123579999
Q ss_pred cCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCCCCceEEecCCCcE
Q 011045 376 CGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTF 455 (495)
Q Consensus 376 SGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~~~y~~~~~~~g~~ 455 (495)
|||++++||+++|++|.+++.+.+... +. +...|+ . ..+|+|+|+| +|.+++||+++|+++.. +..
T Consensus 219 SGTs~~~lP~~~~~~~~~~~~~~~~~~----g~-~~~~C~-----~-~~~p~i~f~f-~g~~~~ip~~~~~~~~~--~~~ 284 (325)
T 2apr_A 219 TGTTLLILPNNIAASVARAYGASDNGD----GT-YTISCD-----T-SAFKPLVFSI-NGASFQVSPDSLVFEEF--QGQ 284 (325)
T ss_dssp TTCSSEEEEHHHHHHHHHHHTCEECSS----SC-EEECSC-----G-GGCCCEEEEE-TTEEEEECGGGGEEEEE--TTE
T ss_pred cCCccEECCHHHHHHHHHHHhcccCCC----Ce-EEEECC-----C-CCCCcEEEEE-CCEEEEECHHHEEEcCC--CCe
Confidence 999999999999999999997654321 21 222354 2 3589999999 56699999999998754 568
Q ss_pred EEE-EEecCCCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 456 CFA-FAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 456 Cl~-~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
|++ |...+.+.||||+.|||++|+|||++++|||||+++
T Consensus 285 C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 285 CIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp EEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 984 565556689999999999999999999999999874
No 8
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=6.1e-56 Score=450.94 Aligned_cols=294 Identities=21% Similarity=0.369 Sum_probs=247.9
Q ss_pred CceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCCCCcCCCCcce
Q 011045 155 GSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLY 234 (495)
Q Consensus 155 ~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~c~y 234 (495)
.+++|+++|.||||+|++.|+|||||+++||+|.+|..|.++.++.|||++|+||+.+.| |.|
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~~-----------------~~~ 75 (329)
T 3c9x_A 13 ADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVSG-----------------ASW 75 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECTT-----------------CBE
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcCC-----------------CeE
Confidence 478999999999999999999999999999999999999888899999999999998654 899
Q ss_pred eeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCCc---cCcceeEeccCCCCCcc-------------cccCC
Q 011045 235 QVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLF---VGSAGLLGLGGGMLSLT-------------KQIKA 298 (495)
Q Consensus 235 ~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~~---~~~~GIlGLg~~~~S~~-------------sQl~~ 298 (495)
.+.|++|+...|.+++|+|+|+ +..++++.|||++...+.+ ...+||||||++.++.. .|+..
T Consensus 76 ~i~Yg~Gs~~~G~~~~D~v~ig-~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~i~~ 154 (329)
T 3c9x_A 76 SISYGDGSSSSGDVYTDKVTIG-GFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASSLAE 154 (329)
T ss_dssp EEECTTSCEEEEEEEEEEEEET-TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTTSSS
T ss_pred EEEeCCCCcEEEEEEEEEEEEC-CEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHhcCC
Confidence 9999999977799999999999 8999999999999876654 46899999999877653 24668
Q ss_pred CeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEE
Q 011045 299 TSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIV 374 (495)
Q Consensus 299 ~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~ii 374 (495)
++||+||.+. ..|.|+||++|+. ++.|+|+... .++|.|.|++|+||++.+. .....+||
T Consensus 155 ~~FS~~l~~~---~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~----------~~~~~aii 218 (329)
T 3c9x_A 155 PLFTADLRHG---QNGSYNFGYIDTSVAKGPVAYTPVDNS---QGFWEFTASGYSVGGGKLN----------RNSIDGIA 218 (329)
T ss_dssp SEEEEECCSS---SCEEEEESSCCGGGCSSCEEEEECBCT---TSSCEEEECCEEETTCCCC----------SCCEEEEE
T ss_pred CEEEEEecCC---CCcEEEEeCcChhhcccceEEEEccCC---CceEEEEEeeEEECCEecc----------CCCceEEE
Confidence 9999999652 3799999999965 8999999753 4789999999999998653 12457999
Q ss_pred ccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCCCCceEEecCC-C
Q 011045 375 DCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSA-G 453 (495)
Q Consensus 375 DSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~~~y~~~~~~~-g 453 (495)
||||++++||+++|++|.+++..... ....+. +...|+ ..+|+|+|+| +|++++||+++|+++...+ .
T Consensus 219 DSGTt~~~lp~~~~~~i~~~i~~a~~--~~~~~~-~~~~C~-------~~~P~i~f~f-~g~~~~ip~~~~~~~~~~~~~ 287 (329)
T 3c9x_A 219 DTGTTLLLLDDNVVDAYYANVQSAQY--DNQQEG-VVFDCD-------EDLPSFSFGV-GSSTITIPGDLLNLTPLEEGS 287 (329)
T ss_dssp CTTCCSEEECHHHHHHHHTTCTTCEE--ETTTTE-EEEETT-------CCCCCEEEEE-TTEEEEECGGGGEEEESSTTC
T ss_pred ECCCCcEeCCHHHHHHHHHhCCCcEE--cCCCCE-EEEECC-------CCCCcEEEEE-CCEEEEECHHHeeeeccCCCC
Confidence 99999999999999999998743211 111222 223465 3689999999 7999999999999876432 3
Q ss_pred cEEEE-EEecC-CCceeecHHhhcceEEEEeCCCCEEEEeeC
Q 011045 454 TFCFA-FAPTS-SALSIIGNVQQQGTRVSFDLANNRVGFTPN 493 (495)
Q Consensus 454 ~~Cl~-~~~~~-~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~ 493 (495)
..|++ |.+.+ .+.||||+.|||++|+|||++++|||||+.
T Consensus 288 ~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 288 STCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp SEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 78995 77653 468999999999999999999999999974
No 9
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.3e-55 Score=447.41 Aligned_cols=297 Identities=24% Similarity=0.373 Sum_probs=249.1
Q ss_pred eeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCC--CccCCCCCccCCCCCCcccCCCCCCccccC
Q 011045 144 FSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCT--ECYQQSDPIFDPKTSSSYSPLPCAAPQCKS 221 (495)
Q Consensus 144 ~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~--~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~ 221 (495)
...|+.+. .+++|+++|.||||+|++.|++||||+++||+|.+|. .|. .++.|||++|+||+...
T Consensus 4 ~~~~l~n~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~--~~~~y~~~~SsT~~~~~-------- 70 (323)
T 3cms_A 4 ASVPLTNY---LDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACK--NHQRFDPRKSSTFQNLG-------- 70 (323)
T ss_dssp EEEEEEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHH--TSCCBCGGGCTTCEEEE--------
T ss_pred ceeeeEec---cCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCccccc--CCCCCCCccCCCeEECC--------
Confidence 34677663 3689999999999999999999999999999999995 565 67899999999999877
Q ss_pred CCCCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCC-c--cCcceeEeccCCCCCcc-----
Q 011045 222 LDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGL-F--VGSAGLLGLGGGMLSLT----- 293 (495)
Q Consensus 222 ~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~-~--~~~~GIlGLg~~~~S~~----- 293 (495)
|.|.+.|++|+. .|.+++|+|+|+ +..++++.|||++...+. | ...+||||||++.++..
T Consensus 71 ----------~~~~i~Yg~Gs~-~G~~~~D~v~ig-~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~ 138 (323)
T 3cms_A 71 ----------KPLSIHYGTGSM-QGILGYDTVTVS-NIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPV 138 (323)
T ss_dssp ----------EEEEEEETTEEE-EEEEEEEEEEET-TEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCH
T ss_pred ----------cEEEEEeCCCCe-EEEEEEEEEEEC-CeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCH
Confidence 899999999985 599999999999 899999999999988662 3 46899999999887643
Q ss_pred -----cc--cCCCeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCcc
Q 011045 294 -----KQ--IKATSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLF 362 (495)
Q Consensus 294 -----sQ--l~~~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~ 362 (495)
+| +..++||+||.+... .|.|+||++|+. ++.|+|+... .+|.|.|++|+||++.+.++
T Consensus 139 ~~~l~~q~~i~~~~FS~~l~~~~~--~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~---- 208 (323)
T 3cms_A 139 FDNMMNRHLVAQDLFSVYMDRNGQ--ESMLTLGAIDPSYYTGSLHWVPVTVQ----QYWQFTVDSVTISGVVVACE---- 208 (323)
T ss_dssp HHHHHHTTCSSSSEEEEECCTTSS--CEEEEESCCCGGGEEEEEEEEECSSB----TTBEEEEEEEEETTEEEEST----
T ss_pred HHHHHHCCCCCCCEEEEEECCCCC--CEEEEECCCChhhccCceEEEECccC----CeEEEEEeeEEECCEEeecC----
Confidence 33 458999999976533 399999999975 7999999763 79999999999999887643
Q ss_pred ccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCC
Q 011045 363 EMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPA 442 (495)
Q Consensus 363 ~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~ 442 (495)
....+||||||++++||++++++|.+++++... ..+. +...|+ ....+|+|+|+| +|++++||+
T Consensus 209 -----~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~g~-~~~~C~-----~~~~~P~i~f~f-~g~~~~i~~ 272 (323)
T 3cms_A 209 -----GGCQAILDTGTSKLVGPSSDILNIQQAIGATQN----QYGE-FDIDCD-----NLSYMPTVVFEI-NGKMYPLTP 272 (323)
T ss_dssp -----TCEEEEECTTCCSEEECHHHHHHHHHHHTCEEE----TTTE-EEECTT-----CTTTSCCEEEEE-TTEEEEECH
T ss_pred -----CCcEEEEecCCccEeCCHHHHHHHHHHhCCeec----CCCc-EEEECC-----CCccCceEEEEE-CCEEEEECH
Confidence 245799999999999999999999999865321 1221 223454 345799999999 899999999
Q ss_pred CCceEEecCCCcEEE-EEEec-CCCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 443 KNYLIPVDSAGTFCF-AFAPT-SSALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 443 ~~y~~~~~~~g~~Cl-~~~~~-~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
++|+++ .+..|+ +|.+. ..+.||||+.|||++|+|||++++|||||+++
T Consensus 273 ~~y~~~---~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 273 SAYTSQ---DQGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp HHHEEE---ETTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHhccC---CCCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 999998 256898 68876 35689999999999999999999999999975
No 10
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=7.4e-56 Score=458.70 Aligned_cols=300 Identities=22% Similarity=0.386 Sum_probs=252.4
Q ss_pred eeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCC----CccCCCCCccCCCCCCcccCCCCCCccc
Q 011045 144 FSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCT----ECYQQSDPIFDPKTSSSYSPLPCAAPQC 219 (495)
Q Consensus 144 ~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~----~C~~~~~~~f~p~~SsT~~~~~C~~~~C 219 (495)
...|+.+. .+.+|+++|.||||||++.|+|||||+++||+|..|. .|. .++.|||++|+||+..+
T Consensus 51 ~~~~l~n~---~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~--~~~~y~~~~SsT~~~~~------ 119 (383)
T 2x0b_A 51 SSVILTNY---MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACV--YHKLFDASDSSSYKHNG------ 119 (383)
T ss_dssp CEEEEEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHH--TSCCBCGGGCTTCEEEE------
T ss_pred ceEeeeec---CCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCccccc--CCCCCCCCCCCcEEECC------
Confidence 35777763 4689999999999999999999999999999999996 586 56899999999999877
Q ss_pred cCCCCCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCC-c--cCcceeEeccCCCCCcc---
Q 011045 220 KSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGL-F--VGSAGLLGLGGGMLSLT--- 293 (495)
Q Consensus 220 ~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~-~--~~~~GIlGLg~~~~S~~--- 293 (495)
|.|.+.|++|+. .|.+++|+|+|+ +..++ +.|||++...+. | ..++||||||++.++..
T Consensus 120 ------------~~~~i~Yg~Gs~-~G~~~~Dtv~ig-~~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~ 184 (383)
T 2x0b_A 120 ------------TELTLRYSTGTV-SGFLSQDIITVG-GITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVT 184 (383)
T ss_dssp ------------EEEEEECSSCEE-EEEEEEEEEEET-TEEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCC
T ss_pred ------------cEEEEEcCCccE-EEEEEeeEEEEc-CceEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCC
Confidence 899999999985 599999999999 89999 999999988763 2 57899999999988743
Q ss_pred -------cc--cCCCeEEEEecCCCCC---CcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeec
Q 011045 294 -------KQ--IKATSLAYCLVDRDSP---ASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQI 357 (495)
Q Consensus 294 -------sQ--l~~~~FS~~L~~~~~~---~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i 357 (495)
+| +..++||+||.+.... ..|.|+|||+|+. ++.|+|+... ++|.|.|++|+||++.+..
T Consensus 185 ~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~----~~w~v~l~~i~v~~~~~~~ 260 (383)
T 2x0b_A 185 PIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT----GVWQIQMKGVSVGSSTLLC 260 (383)
T ss_dssp CHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST----TSCEEEECEEEESSCCCBS
T ss_pred cHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC----ceEEEEEeEEEeCCceEEc
Confidence 33 4589999999875433 3799999999976 8999999863 7999999999999987531
Q ss_pred CCCccccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcE
Q 011045 358 PPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKA 437 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~ 437 (495)
.+.+.+||||||+++++|.++|++|.+++++.. ..+. +...|+. ...+|+|+|+| +|++
T Consensus 261 ---------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----~~g~-~~v~C~~-----~~~~P~i~f~~-~g~~ 319 (383)
T 2x0b_A 261 ---------EDGCLALVDTGASYISGSTSSIEKLMEALGAKK-----RLFD-YVVKCNE-----GPTLPDISFHL-GGKE 319 (383)
T ss_dssp ---------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-----CSSC-EEEEGGG-----TTTCCCEEEEE-TTEE
T ss_pred ---------CCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-----cCCc-EEEeccc-----cccCceEEEEE-CCEE
Confidence 235679999999999999999999999997542 2232 2334764 45799999999 8999
Q ss_pred EEeCCCCceEEecCC-CcEEE-EEEec-----CCCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 438 LDLPAKNYLIPVDSA-GTFCF-AFAPT-----SSALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 438 ~~lp~~~y~~~~~~~-g~~Cl-~~~~~-----~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
++||+++|+++.... +..|+ +|.+. .++.||||+.|||++|+|||++|+|||||+++
T Consensus 320 ~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 320 YTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp EEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 999999999976532 46899 78765 24689999999999999999999999999874
No 11
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2.5e-55 Score=446.33 Aligned_cols=299 Identities=26% Similarity=0.494 Sum_probs=250.2
Q ss_pred eccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCCC
Q 011045 146 TPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVS 225 (495)
Q Consensus 146 ~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~ 225 (495)
.|+. ..+++|+++|.||||+|++.|++||||+++||+|.+|..+.|..++.|||++|+||+...
T Consensus 5 ~~l~----~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------ 68 (329)
T 1htr_B 5 EPMA----YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTNG------------ 68 (329)
T ss_dssp CGGG----GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE------------
T ss_pred eeeE----EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCCCcCCCccCCCeEECC------------
Confidence 5665 247899999999999999999999999999999999985333457899999999999876
Q ss_pred CcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCC-c--cCcceeEeccCCCCCccc--------
Q 011045 226 ACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGL-F--VGSAGLLGLGGGMLSLTK-------- 294 (495)
Q Consensus 226 ~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~-~--~~~~GIlGLg~~~~S~~s-------- 294 (495)
|.|.+.|++|+. .|.+++|+|+|+ +..++++.|||+++..+. | ...+||||||++.++...
T Consensus 69 ------~~~~i~Yg~gs~-~G~~~~D~v~~g-~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l 140 (329)
T 1htr_B 69 ------QTFSLQYGSGSL-TGFFGYDTLTVQ-SIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGM 140 (329)
T ss_dssp ------EEEEEEETTEEE-EEEEEEEEEEET-TEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHH
T ss_pred ------cEEEEEeCCCCe-EEEEEeeeEEEc-ceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHH
Confidence 899999999987 599999999999 899999999999988663 3 468999999999887542
Q ss_pred --c--cCCCeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCcccccc
Q 011045 295 --Q--IKATSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDE 366 (495)
Q Consensus 295 --Q--l~~~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~ 366 (495)
| +..++||+||.+......|.|+||++|+. ++.|+|+... .+|.|.|++|+||++.+...
T Consensus 141 ~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~-------- 208 (329)
T 1htr_B 141 VQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE----LYWQIGIEEFLIGGQASGWC-------- 208 (329)
T ss_dssp HHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSS----SSCEEEECEEEETTEECCTT--------
T ss_pred HhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCC----ceEEEEEeEEEECCceeeec--------
Confidence 2 44899999997753323799999999975 7999999763 79999999999999875411
Q ss_pred CCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCCCCce
Q 011045 367 AGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYL 446 (495)
Q Consensus 367 ~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~~~y~ 446 (495)
.....+||||||++++||+++|++|.+++++... ..+. +...|+. ...+|+|+|+| +|++++||+++|+
T Consensus 209 ~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~----~~g~-~~~~C~~-----~~~~P~i~f~f-~g~~~~i~~~~y~ 277 (329)
T 1htr_B 209 SEGCQAIVDTGTSLLTVPQQYMSALLQATGAQED----EYGQ-FLVNCNS-----IQNLPSLTFII-NGVEFPLPPSSYI 277 (329)
T ss_dssp TTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC----TTSC-EEECGGG-----GGGSCCEEEEE-TTEEEEECHHHHE
T ss_pred CCCceEEEecCCccEECCHHHHHHHHHHhCCeec----CCCe-EEEeCCC-----cccCCcEEEEE-CCEEEEECHHHhc
Confidence 2346799999999999999999999999975431 2222 2334654 45799999999 8999999999999
Q ss_pred EEecCCCcEEE-EEEecC-----CC-ceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 447 IPVDSAGTFCF-AFAPTS-----SA-LSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 447 ~~~~~~g~~Cl-~~~~~~-----~~-~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
++.. + .|+ +|.+.+ ++ .||||+.|||++|+|||++++|||||+++
T Consensus 278 ~~~~--g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 278 LSNN--G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EECS--S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccCC--C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 9765 4 898 787642 34 79999999999999999999999999875
No 12
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=3.3e-55 Score=444.52 Aligned_cols=298 Identities=25% Similarity=0.439 Sum_probs=250.3
Q ss_pred eeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCC
Q 011045 144 FSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLD 223 (495)
Q Consensus 144 ~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~ 223 (495)
+..|+.+. .+++|+++|.||||+|++.|++||||+++||+|..|..+.|..++.|||++|+||+...
T Consensus 2 ~~~~l~n~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~---------- 68 (324)
T 1am5_A 2 VTEQMKNE---ADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNKFKPRQSSTYVETG---------- 68 (324)
T ss_dssp EEEEEEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTSCCBCGGGCTTCEEEE----------
T ss_pred ceeeeecC---CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCCCcCCCccCCCeEeCC----------
Confidence 34677653 46899999999999999999999999999999999984333367899999999999876
Q ss_pred CCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCC-c--cCcceeEeccCCCCCccc------
Q 011045 224 VSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGL-F--VGSAGLLGLGGGMLSLTK------ 294 (495)
Q Consensus 224 ~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~-~--~~~~GIlGLg~~~~S~~s------ 294 (495)
|.|.+.|++|+. .|.+++|+|+|+ +..++++.|||++...+. | ...+||||||++.++...
T Consensus 69 --------~~~~i~Yg~Gs~-~G~~~~D~v~~g-~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 138 (324)
T 1am5_A 69 --------KTVDLTYGTGGM-RGILGQDTVSVG-GGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFD 138 (324)
T ss_dssp --------EEEEEECSSCEE-EEEEEEEEEESS-SSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHH
T ss_pred --------cEEEEEECCCCe-EEEEEECceeEC-CcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHH
Confidence 899999999988 599999999999 899999999999988663 3 468999999999877542
Q ss_pred ----c--cCCCeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCcccc
Q 011045 295 ----Q--IKATSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEM 364 (495)
Q Consensus 295 ----Q--l~~~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~ 364 (495)
| +..++||+||.+.. ...|.|+||++|+. ++.|+|+... .+|.|.|++|+||++.+..
T Consensus 139 ~l~~qg~i~~~~FS~~l~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~------- 206 (324)
T 1am5_A 139 NMGSQSLVEKDLFSFYLSGGG-ANGSEVMLGGVDNSHYTGSIHWIPVTAE----KYWQVALDGITVNGQTAAC------- 206 (324)
T ss_dssp HHHHTTCSSSSEEEEECCSTT-CSCEEEEESSCCGGGBCSCCEEEEEEEE----TTEEEEECEEEETTEECCC-------
T ss_pred hHHhcCCCCCCEEEEEecCCC-CCCcEEEECccCHHHcCCceEEEecCCC----cEEEEEEeEEEECCceeec-------
Confidence 2 44899999997653 34899999999975 8999999863 7999999999999987531
Q ss_pred ccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCCCC
Q 011045 365 DEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKN 444 (495)
Q Consensus 365 ~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~~~ 444 (495)
.+ ..+||||||++++||+++|++|.+++++. . ..+. +...|+ ....+|+|+|+| +|++++||+++
T Consensus 207 --~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~----~~g~-~~~~C~-----~~~~~P~i~f~f-~g~~~~i~~~~ 271 (324)
T 1am5_A 207 --EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS-E----NQGE-MMGNCA-----SVQSLPDITFTI-NGVKQPLPPSA 271 (324)
T ss_dssp --CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE-E----CCCC-EECCTT-----SSSSSCCEEEEE-TTEEEEECHHH
T ss_pred --cC-ceEEEecCCccEECCHHHHHHHHHHhCCc-c----cCCc-EEEeCC-----CcccCCcEEEEE-CCEEEEECHHH
Confidence 12 67999999999999999999999998754 1 2222 223454 445799999999 89999999999
Q ss_pred ceEEecCCCcEEE-EEEecC-----CCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 445 YLIPVDSAGTFCF-AFAPTS-----SALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 445 y~~~~~~~g~~Cl-~~~~~~-----~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
|+++. +..|+ +|.+.+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 272 y~~~~---~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 272 YIEGD---QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp HEEES---SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred hcccC---CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 99975 45798 787652 4579999999999999999999999999975
No 13
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.5e-55 Score=446.21 Aligned_cols=297 Identities=25% Similarity=0.380 Sum_probs=248.2
Q ss_pred eccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCCC
Q 011045 146 TPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVS 225 (495)
Q Consensus 146 ~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~ 225 (495)
.|+.+. .+.+|+++|.||||+|++.|++||||+++||+|.+|..|.|+.++.|||++|+||+..+
T Consensus 3 ~~l~n~---~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------ 67 (320)
T 4aa9_A 3 EPLTSY---LDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNLG------------ 67 (320)
T ss_dssp -----C---CCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE------------
T ss_pred ccceec---cCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcCC------------
Confidence 355543 47899999999999999999999999999999999996666678999999999999887
Q ss_pred CcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCC-c--cCcceeEeccCCCCCcc---------
Q 011045 226 ACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGL-F--VGSAGLLGLGGGMLSLT--------- 293 (495)
Q Consensus 226 ~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~-~--~~~~GIlGLg~~~~S~~--------- 293 (495)
|.|.+.|++|+. .|.+++|+|+|+ +..++++.|||++...+. + ...+||||||++.++..
T Consensus 68 ------~~~~i~Yg~gs~-~G~~~~D~v~ig-~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l 139 (320)
T 4aa9_A 68 ------KPLSIHYGTGSM-EGFLGYDTVTVS-NIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNM 139 (320)
T ss_dssp ------EEEEEEETTEEE-EEEEEEEEEEET-TEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHH
T ss_pred ------cEEEEEECCcEE-EEEEEEEEEEEC-CEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHH
Confidence 899999999995 699999999999 899999999999988763 3 45799999999876532
Q ss_pred -cc--cCCCeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCcccccc
Q 011045 294 -KQ--IKATSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDE 366 (495)
Q Consensus 294 -sQ--l~~~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~ 366 (495)
.| +..++||+||.+. ...|.|+||++|+. ++.|+|+.. ..+|.|.+++|+|+++.+.++
T Consensus 140 ~~~g~i~~~~Fs~~l~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~~~-------- 205 (320)
T 4aa9_A 140 MDRHLVARDLFSVYMDRN--GQGSMLTLGAIDPSYYTGSLHWVPVTL----QQYWQFTVDSVTINGVAVACV-------- 205 (320)
T ss_dssp HHTTCSSSSEEEEECCSS--SSCCEEEETCCCGGGEEEEEEEEECSS----BTTBEEEECEEEETTEEEEST--------
T ss_pred HhCCCCCCceEEEEeCCC--CCCeEEEEcccCHHHccCceEEEEccc----CCceEEEEeEEEECCEEeccC--------
Confidence 22 4488999999764 34799999999976 799999975 379999999999999987643
Q ss_pred CCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCCCCce
Q 011045 367 AGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYL 446 (495)
Q Consensus 367 ~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~~~y~ 446 (495)
....+||||||++++||++++++|.+++++... ..+ +|.++|.....+|+|+|+| +|++++||+++|+
T Consensus 206 -~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~----~~g------~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y~ 273 (320)
T 4aa9_A 206 -GGCQAILDTGTSVLFGPSSDILKIQMAIGATEN----RYG------EFDVNCGNLRSMPTVVFEI-NGRDYPLSPSAYT 273 (320)
T ss_dssp -TCEEEEECTTCSSEEEEHHHHHHHHHHTTCEEC----TTS------CEEECGGGGGGCCCEEEEE-TTEEEEECHHHHE
T ss_pred -CCcEEEEECCCCcEECCHHHHHHHHHHhCCccc----CCC------cEEEeCCCCCcCceEEEEE-CCEEEEECHHHhc
Confidence 245799999999999999999999999865421 122 2334444456799999999 8999999999999
Q ss_pred EEecCCCcEEE-EEEec-CCCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 447 IPVDSAGTFCF-AFAPT-SSALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 447 ~~~~~~g~~Cl-~~~~~-~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
.+ ++..|+ +|... .++.||||+.|||++|+|||++++|||||+++
T Consensus 274 ~~---~~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 274 SK---DQGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp EE---ETTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cC---CCCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 86 246898 68765 34579999999999999999999999999975
No 14
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.6e-55 Score=447.80 Aligned_cols=293 Identities=22% Similarity=0.353 Sum_probs=245.5
Q ss_pred CceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCCCCcCCCCcce
Q 011045 155 GSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLY 234 (495)
Q Consensus 155 ~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~c~y 234 (495)
.+++|+++|.||||+|++.|++||||+++||+|.+|..|.+ .++.|||++|+||+.+.| |.|
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-~~~~y~~~~SsT~~~~~~-----------------~~~ 74 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-XQTIYTPSKSTTAKLLSG-----------------ATW 74 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEEEE-----------------EEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-ccCccCCccCccceecCC-----------------CeE
Confidence 46899999999999999999999999999999999999987 789999999999998643 899
Q ss_pred eeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCCc---cCcceeEeccCCCCCcc-------------cccCC
Q 011045 235 QVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLF---VGSAGLLGLGGGMLSLT-------------KQIKA 298 (495)
Q Consensus 235 ~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~~---~~~~GIlGLg~~~~S~~-------------sQl~~ 298 (495)
.+.|++|+...|.+++|+|+|+ +..++++.|||++...+.+ ...+||||||++.++.. .|+..
T Consensus 75 ~i~Yg~Gs~~~G~~~~D~v~~g-~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~i~~ 153 (329)
T 1oew_A 75 SISYGDGSSSSGDVYTDTVSVG-GLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKASLDS 153 (329)
T ss_dssp EEECTTSCEEEEEEEEEEEEET-TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTTSSS
T ss_pred EEEeCCCCcEEEEEEEEEEEEC-CEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHhccC
Confidence 9999999977799999999999 8999999999999877654 46899999999877653 34668
Q ss_pred CeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEE
Q 011045 299 TSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIV 374 (495)
Q Consensus 299 ~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~ii 374 (495)
++||+||.+. ..|.|+||++|+. ++.|+|+..+ .++|.|.|++|+||++.+.. ....+||
T Consensus 154 ~~FS~~L~~~---~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~~v~l~~i~v~~~~~~~----------~~~~aii 217 (329)
T 1oew_A 154 PVFTADLGYH---APGTYNFGFIDTTAYTGSITYTAVSTK---QGFWEWTSTGYAVGSGTFKS----------TSIDGIA 217 (329)
T ss_dssp SEEEEECCSS---SCEEEEESCCCTTSSSSCCEEEECBCT---TSSCEEEEEEEEETTSCCEE----------EEEEEEE
T ss_pred cEEEEEccCC---CCeEEEEeccChHhcccceEEEEccCC---CceEEEEEeeEEECCeeccC----------CCceEEE
Confidence 9999999752 3799999999975 8999999853 47899999999999986531 1357999
Q ss_pred ccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCCCCceEEecC-CC
Q 011045 375 DCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDS-AG 453 (495)
Q Consensus 375 DSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~~~y~~~~~~-~g 453 (495)
||||++++||+++|++|.+++..... ....+. +...|+ ..+|+|+|+| ||++++||+++|+++... +.
T Consensus 218 DSGTt~~~lP~~~~~~l~~~i~~a~~--~~~~g~-~~~~C~-------~~~P~i~f~f-gg~~~~ip~~~~~~~~~~~~~ 286 (329)
T 1oew_A 218 DTGTTLLYLPATVVSAYWAQVSGAKS--SSSVGG-YVFPCS-------ATLPSFTFGV-GSARIVIPGDYIDFGPISTGS 286 (329)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCEE--ETTTTE-EEEETT-------CCCCCEEEEE-TTEEEEECHHHHEEEESSTTC
T ss_pred eCCCCCEECCHHHHHHHHHhCCCcEE--cCCCCE-EEEECC-------CCCCcEEEEE-CCEEEEECHHHeeeeecCCCC
Confidence 99999999999999999998743211 111222 223465 3689999999 899999999999987532 34
Q ss_pred cEEEE-EEecC-CCceeecHHhhcceEEEEeC-CCCEEEEeeC
Q 011045 454 TFCFA-FAPTS-SALSIIGNVQQQGTRVSFDL-ANNRVGFTPN 493 (495)
Q Consensus 454 ~~Cl~-~~~~~-~~~~IlG~~fl~~~yvvfD~-~~~rIGFa~~ 493 (495)
..|++ |.+.+ .+.||||+.|||++|+|||+ +++|||||+.
T Consensus 287 ~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 287 SSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp SEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 78995 66653 46899999999999999999 9999999984
No 15
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=5.9e-55 Score=444.54 Aligned_cols=295 Identities=19% Similarity=0.356 Sum_probs=247.2
Q ss_pred eeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCC--CCCCc-------cCCCCCccCCCCCCcccCCCC
Q 011045 144 FSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCR--PCTEC-------YQQSDPIFDPKTSSSYSPLPC 214 (495)
Q Consensus 144 ~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~--~C~~C-------~~~~~~~f~p~~SsT~~~~~C 214 (495)
+.+|+.+. +++|+++|.||||+|++.|+|||||+++||+|. +|..| .|+.++.|||++|+||+..+
T Consensus 3 ~~~~l~~~----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~- 77 (334)
T 1j71_A 3 VPTTLINE----GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN- 77 (334)
T ss_dssp EEEEEEEC----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE-
T ss_pred eeEEEecC----CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC-
Confidence 56777764 588999999999999999999999999999876 77654 34567899999999999876
Q ss_pred CCccccCCCCCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCCccCcceeEeccCCCC----
Q 011045 215 AAPQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLFVGSAGLLGLGGGML---- 290 (495)
Q Consensus 215 ~~~~C~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~~~~~~GIlGLg~~~~---- 290 (495)
|.|.+.|++|+...|.+++|+|+|+ +..++++.|||++... ..+||||||++.+
T Consensus 78 -----------------~~~~i~Yg~Gs~~~G~~~~D~v~~g-~~~~~~~~fg~~~~~~----~~~GilGLg~~~~~~~~ 135 (334)
T 1j71_A 78 -----------------QDFSIEYGDLTSSQGSFYKDTVGFG-GISIKNQQFADVTTTS----VDQGIMGIGFTADEAGY 135 (334)
T ss_dssp -----------------EEEEEEBTTSCEEEEEEEEEEEEET-TEEEEEEEEEEEEEES----SSSCEEECSCGGGSSTT
T ss_pred -----------------CceEEEECCCCEEEEEEEEEEEEEC-CEEEccEEEEEEEecC----CCccEEEEcCCcccCcc
Confidence 8999999999987899999999999 8999999999999764 5799999999865
Q ss_pred ----Cccccc------CCCeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeee
Q 011045 291 ----SLTKQI------KATSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQ 356 (495)
Q Consensus 291 ----S~~sQl------~~~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~ 356 (495)
+++.|| ..++||+||.+. ....|.|+||++|+. ++.|+|+..+ .+|.|.|++|+||++.+.
T Consensus 136 ~~~~~~~~~L~~qg~i~~~~Fs~~l~~~-~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~ 210 (334)
T 1j71_A 136 NLYDNVPVTLKKQGIINKNAYSLYLNSE-DASTGKIIFGGVDNAKYTGTLTALPVTSS----VELRVHLGSINFDGTSVS 210 (334)
T ss_dssp CCCCCHHHHHHHTTSCSSSEEEEECCCT-TCSEEEEEETEEETTSEEEEEEEEECCCS----SSCEEEEEEEEETTEEEE
T ss_pred ccCCcHHHHHHHCCCCCccEEEEEeCCC-CCCCeEEEEeeechHHccCceEEEEccCC----CeEEEEEeEEEECCEecc
Confidence 444443 378999999764 334899999999976 7999999865 589999999999998875
Q ss_pred cCCCccccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCc
Q 011045 357 IPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGK 436 (495)
Q Consensus 357 i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~ 436 (495)
. ...+||||||++++||+++|++|.+++++... ...+.+.+..|+ .+|.|+|+|.||+
T Consensus 211 ~-----------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~~~~~~~~C~--------~~p~i~f~f~~g~ 268 (334)
T 1j71_A 211 T-----------NADVVLDSGTTITYFSQSTADKFARIVGATWD---SRNEIYRLPSCD--------LSGDAVFNFDQGV 268 (334)
T ss_dssp E-----------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE---TTTTEEECSSSC--------CCSEEEEEESTTC
T ss_pred C-----------CccEEEeCCCCcEecCHHHHHHHHHHcCCccc---CCCceEEEEcCC--------CCCceEEEEcCCc
Confidence 3 24689999999999999999999999987542 111121114464 2899999997789
Q ss_pred EEEeCCCCceEEecCCCcEEE-EEEecCCCceeecHHhhcceEEEEeCCCCEEEEeeCCC
Q 011045 437 ALDLPAKNYLIPVDSAGTFCF-AFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC 495 (495)
Q Consensus 437 ~~~lp~~~y~~~~~~~g~~Cl-~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 495 (495)
+++||+++|+++.. ++..|+ +|.+. +.||||+.|||++|+|||++++|||||+++|
T Consensus 269 ~~~i~~~~y~~~~~-~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~ 325 (334)
T 1j71_A 269 KITVPLSELILKDS-DSSICYFGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQVKY 325 (334)
T ss_dssp EEEEEGGGGEEECS-SSSCEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEECC
T ss_pred EEEECHHHheeecC-CCCeeEEEEeEC--CCcEEChHhhccEEEEEECCCCEEEEEecCC
Confidence 99999999999865 344698 56554 4699999999999999999999999999998
No 16
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.2e-54 Score=448.13 Aligned_cols=318 Identities=25% Similarity=0.467 Sum_probs=254.2
Q ss_pred eeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCC-
Q 011045 144 FSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSL- 222 (495)
Q Consensus 144 ~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~- 222 (495)
+.+||... ..+++|+++|.|||| |+|||||+++||+|.+|. +|+.+.|.++.|...
T Consensus 3 ~~~pv~~~--~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~----------------~~~~~~C~s~~C~~~~ 59 (381)
T 1t6e_X 3 VLAPVTKD--PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ----------------PPAEIPCSSPTCLLAN 59 (381)
T ss_dssp EEEEEEEC--TTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC----------------CCCCCBTTSHHHHHHH
T ss_pred eEEeEEec--CCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC----------------CCCccCCCCchhcccc
Confidence 45677643 347899999999998 999999999999998651 356677888778542
Q ss_pred --CCCCcCC---------CCc-ceeeecCCCceEEEEEEEEEEEECC---Cccccce----EEeEEecC--CCCccCcce
Q 011045 223 --DVSACRA---------NRC-LYQVAYGDGSFTVGDLVTETVSFGN---SGSVKGI----ALGCGHDN--EGLFVGSAG 281 (495)
Q Consensus 223 --~~~~C~~---------~~c-~y~~~Ygdgs~~~G~~~~Dtlt~g~---~~~v~~~----~fG~~~~~--~g~~~~~~G 281 (495)
....|.. ..| .|.+.|+||+.+.|.+++|+|+|++ +..++++ .|||++.+ .+.+..++|
T Consensus 60 ~~~~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dG 139 (381)
T 1t6e_X 60 AYPAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTG 139 (381)
T ss_dssp SSCCTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEE
T ss_pred CCCCCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCCCce
Confidence 2224542 237 5999999999877999999999983 2466665 56999876 444567899
Q ss_pred eEeccCCCCCcccccC-----CCeEEEEecCCCCCCcceEEeccCCC------CCceeeeeecCCCCCeeEEEEeeeeEe
Q 011045 282 LLGLGGGMLSLTKQIK-----ATSLAYCLVDRDSPASGVLEFNSARG------GDAVTAPLIRNKKVDTFYYVGLTGFSV 350 (495)
Q Consensus 282 IlGLg~~~~S~~sQl~-----~~~FS~~L~~~~~~~~g~L~fGg~d~------~~~~~tpl~~~~~~~~~y~V~l~gIsV 350 (495)
|||||++++|+++|+. .++||+||.+. ..|.|+||+.+. +++.|+|++.++.. .+|+|.|++|+|
T Consensus 140 IlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~---~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~-~~y~v~l~~i~v 215 (381)
T 1t6e_X 140 VAGLANSGLALPAQVASAQKVANRFLLCLPTG---GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGS-PAHYISARSIVV 215 (381)
T ss_dssp EEECSSSTTSHHHHHHHHHTCCSEEEEECCSS---SCEEEEESCCSCSCHHHHTTCCEEECBCCTTC-CSCEECEEEEEE
T ss_pred EEEeCCCcchhHHHHhhhcccCceEEEEeCCC---CCeeEEeCCcccccccccCcceeeccccCCCC-cceEEEEEEEEE
Confidence 9999999999999875 58999999764 479999999875 28999999986543 356699999999
Q ss_pred cCeeeecCCCccccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhc-------CCCCC-CCCcccccccccCCCc-
Q 011045 351 GGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAG-------NLKPT-SGVALFDTCYDFSGLR- 421 (495)
Q Consensus 351 gg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~-------~~~~~-~~~~~~~~C~~~~~~~- 421 (495)
|++.+.++...|. ++++||||||++++||+++|++|+++|.+.+. .+++. .....++.||+.++..
T Consensus 216 g~~~~~~~~~~~~-----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~ 290 (381)
T 1t6e_X 216 GDTRVPVPEGALA-----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGN 290 (381)
T ss_dssp TTEECCCCTTCSC-----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCE
T ss_pred cCEEecCCHHHcc-----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcc
Confidence 9999887766552 46799999999999999999999999988763 23332 2223467899876543
Q ss_pred ---ccccceEEEEEcCCcEEEeCCCCceEEecCCCcEEEEEEecCC--------CceeecHHhhcceEEEEeCCCCEEEE
Q 011045 422 ---SVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSS--------ALSIIGNVQQQGTRVSFDLANNRVGF 490 (495)
Q Consensus 422 ---~~~~P~ltf~f~gg~~~~lp~~~y~~~~~~~g~~Cl~~~~~~~--------~~~IlG~~fl~~~yvvfD~~~~rIGF 490 (495)
...+|+|+|+|.||++|+||+++|+++.. ++..|++|+..+. +.||||+.|||++|+|||++++||||
T Consensus 291 ~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~-~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGf 369 (381)
T 1t6e_X 291 NLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVK-QGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGF 369 (381)
T ss_dssp ETTEECCCCEEEEETTSCEEEECHHHHEEEEE-TTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEE
T ss_pred cccCCcCCeEEEEECCCcEEEeCCCeEEEEcC-CCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEE
Confidence 14689999999667999999999999875 4678999887642 57999999999999999999999999
Q ss_pred eeCC
Q 011045 491 TPNK 494 (495)
Q Consensus 491 a~~~ 494 (495)
|++.
T Consensus 370 A~~~ 373 (381)
T 1t6e_X 370 SRLP 373 (381)
T ss_dssp EECC
T ss_pred eccc
Confidence 9865
No 17
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.1e-54 Score=444.03 Aligned_cols=298 Identities=20% Similarity=0.354 Sum_probs=246.5
Q ss_pred eeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCC--CCCCc-------cCCCCCccCCCCCCcccCCCC
Q 011045 144 FSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCR--PCTEC-------YQQSDPIFDPKTSSSYSPLPC 214 (495)
Q Consensus 144 ~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~--~C~~C-------~~~~~~~f~p~~SsT~~~~~C 214 (495)
+.+|+.+. +++|+++|.||||+|++.|+|||||+++||+|. +|..| .|+.++.|||++|+||+..+
T Consensus 3 v~~~l~~~----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~- 77 (342)
T 2qzx_A 3 VAVTLHNE----AITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN- 77 (342)
T ss_dssp EEEEEEEC----SSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE-
T ss_pred eeEEEecC----CeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC-
Confidence 56677763 589999999999999999999999999999866 67643 23467899999999999877
Q ss_pred CCccccCCCCCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCCccCcceeEeccCCCC----
Q 011045 215 AAPQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLFVGSAGLLGLGGGML---- 290 (495)
Q Consensus 215 ~~~~C~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~~~~~~GIlGLg~~~~---- 290 (495)
|.|.+.|++|+...|.+++|+|+|+ +..++++.|||++... ..+||||||+..+
T Consensus 78 -----------------~~~~i~Yg~Gs~~~G~~~~D~v~~g-~~~v~~~~fg~~~~~~----~~~GilGLg~~~~~~~~ 135 (342)
T 2qzx_A 78 -----------------TRFDIKYGDGSYAKGKLYKDTVGIG-GVSVRDQLFANVWSTS----ARKGILGIGFQSGEATE 135 (342)
T ss_dssp -----------------EEEEEECTTSCEEEEEEEEEEEEET-TEEEEEEEEEEEEEEC----SSSCEEECSCGGGCSSS
T ss_pred -----------------CcEEEEeCCCCeEEEEEEEEEEEEC-CEEecceEEEEEEecC----CCcCEEEEccccccCCC
Confidence 8999999999987899999999999 8999999999999874 5799999999865
Q ss_pred ----Cccccc------CCCeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeee
Q 011045 291 ----SLTKQI------KATSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQ 356 (495)
Q Consensus 291 ----S~~sQl------~~~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~ 356 (495)
+++.|| ..++||+||.+. ....|.|+||++|+. ++.|+|+..+ .+|.|.|++|+||++.+.
T Consensus 136 ~~~~~~~~~L~~qg~i~~~~Fs~~l~~~-~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~ 210 (342)
T 2qzx_A 136 FDYDNLPISLRNQGIIGKAAYSLYLNSA-EASTGQIIFGGIDKAKYSGSLVDLPITSE----KKLTVGLRSVNVRGRNVD 210 (342)
T ss_dssp SCCCCHHHHHHHTTSSSSSEEEEECCCT-TCSEEEEEETEEETTSBSSCCEEEECCCS----SSCEEEEEEEEETTEEEE
T ss_pred ccCccHHHHHHHCCCcCccEEEEEeCCC-CCCCeEEEECccchhhEecceEEEeccCC----ceEEEEEeEEEECCEecC
Confidence 444443 378999999764 234899999999875 7999999875 589999999999998875
Q ss_pred cCCCccccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCc
Q 011045 357 IPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGK 436 (495)
Q Consensus 357 i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~ 436 (495)
. ...+||||||++++||+++|++|++++++.+.. ....+. .|.++|.. +|+|+|+|.||+
T Consensus 211 ~-----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~-~~~~~~-----~~~~~C~~---~p~i~f~f~~g~ 270 (342)
T 2qzx_A 211 A-----------NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKF-DSAGNK-----VYVADCKT---SGTIDFQFGNNL 270 (342)
T ss_dssp E-----------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE-CTTSCE-----EEEECTTC---CCEEEEEETTTE
T ss_pred C-----------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeee-ccCCCc-----EEEEECCC---CCcEEEEECCCc
Confidence 3 246899999999999999999999999875431 111111 23333432 799999997789
Q ss_pred EEEeCCCCceEEec----CCCcEEE-EEEecCCCceeecHHhhcceEEEEeCCCCEEEEeeCCC
Q 011045 437 ALDLPAKNYLIPVD----SAGTFCF-AFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC 495 (495)
Q Consensus 437 ~~~lp~~~y~~~~~----~~g~~Cl-~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 495 (495)
+++||+++|+++.. ..+..|+ +|.+. +.||||+.|||++|+|||++++|||||+++|
T Consensus 271 ~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~ 332 (342)
T 2qzx_A 271 KISVPVSEFLFQTYYTSGKPFPKCEVRIRES--EDNILGDNFLRSAYVVYNLDDKKISMAPVKY 332 (342)
T ss_dssp EEEEEGGGGEECCBCTTSCBCSSEEESEEEC--SSCEECHHHHTTEEEEEETTTTEEEEEEBCC
T ss_pred EEEEcHHHhcccccccCCCCCCccEEEEecC--CCcEeChHhhhcEEEEEECCCCEEEEEeeCC
Confidence 99999999999742 2246798 45554 4699999999999999999999999999998
No 18
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.1e-54 Score=441.16 Aligned_cols=296 Identities=22% Similarity=0.400 Sum_probs=248.9
Q ss_pred eeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEe-----CCCCCCccCCCCCccCCCCCCcccCCCCCCcc
Q 011045 144 FSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQ-----CRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQ 218 (495)
Q Consensus 144 ~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~-----c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~ 218 (495)
+++|+.+. +++|+++|.||||+|++.|++||||+++||+ |.+|..|. .++.|||++|+||+..+
T Consensus 3 i~~~l~~~----~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~----- 71 (339)
T 3fv3_A 3 ISLSLINE----GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCK--SSGTFTPSSSSSYKNLG----- 71 (339)
T ss_dssp EEEEEEEC----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTT--TTCCBCGGGCTTCEEEE-----
T ss_pred eeeEEEcC----CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCC--CCCcCCCccCcceeeCC-----
Confidence 56788775 4789999999999999999999999999998 66666776 57899999999999887
Q ss_pred ccCCCCCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCCccCcceeEeccCCCCC-------
Q 011045 219 CKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLFVGSAGLLGLGGGMLS------- 291 (495)
Q Consensus 219 C~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~~~~~~GIlGLg~~~~S------- 291 (495)
|.|.+.|++|+...|.+++|+|+|+ +..++++.|||++...+ .+||||||++.++
T Consensus 72 -------------~~~~i~Yg~gs~~~G~~~~D~v~~g-~~~v~~~~fg~~~~~~~----~~GilGLg~~~~~~~~~~~~ 133 (339)
T 3fv3_A 72 -------------AAFTIRYGDGSTSQGTWGKDTVTIN-GVSITGQQIADVTQTSV----DQGILGIGYTSNEAVYDTSG 133 (339)
T ss_dssp -------------EEEEEECTTSCEEEEEEEEEEEEET-TEEEEEEEEEEEEEESS----SSCEEECSCGGGCCCBCTTS
T ss_pred -------------ceEEEEECCCceEEEEEEEEEEEEC-CEEECceEEEEEEecCC----CceeEEecCccccccccccc
Confidence 8999999999877899999999999 99999999999998774 6999999998764
Q ss_pred ---------ccccc------CCCeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecC
Q 011045 292 ---------LTKQI------KATSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGG 352 (495)
Q Consensus 292 ---------~~sQl------~~~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg 352 (495)
++.|| ..++||+||.+.. ...|.|+||++|+. ++.|+|+... .+|.|.|++|+|++
T Consensus 134 ~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g 208 (339)
T 3fv3_A 134 RQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPS-AETGTIIFGGVDNAKYSGKLVAEQVTSS----QALTISLASVNLKG 208 (339)
T ss_dssp CBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTT-CSEEEEEETEEETTSBSSCCEEEEBCCS----SSCEEEEEEEEESS
T ss_pred cccCccCCcHHHHHHHCCCCCCceEEEEECCCC-CCCeEEEEeeechHHeecceEEEecccC----ccEEEEEEEEEECC
Confidence 33343 3689999997643 34899999999975 8999999874 58999999999999
Q ss_pred eeeecCCCccccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEE
Q 011045 353 QAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHF 432 (495)
Q Consensus 353 ~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f 432 (495)
+.+.. ...+||||||++++||+++|++|.+++++.........+. +...|+. ..+|+|+|+|
T Consensus 209 ~~~~~-----------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~-~~~~C~~------~~~p~i~f~f 270 (339)
T 3fv3_A 209 SSFSF-----------GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYL-YFIDCNT------DTSGTTVFNF 270 (339)
T ss_dssp CEEEE-----------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEEE-EEECTTC------CCCSEEEEEE
T ss_pred EeecC-----------CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCce-EEEecCC------CCCCcEEEEE
Confidence 98763 2468999999999999999999999998653211011222 2334653 4689999999
Q ss_pred cCCcEEEeCCCCceEEecCCCcEEE-EEEecCCCceeecHHhhcceEEEEeCCCCEEEEeeCCC
Q 011045 433 GAGKALDLPAKNYLIPVDSAGTFCF-AFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC 495 (495)
Q Consensus 433 ~gg~~~~lp~~~y~~~~~~~g~~Cl-~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 495 (495)
.+|++++||+++|+++.. +..|+ +|.+ .+.||||+.|||++|+|||++++|||||+++|
T Consensus 271 ~~g~~~~v~~~~~~~~~~--~~~C~~~i~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~ 330 (339)
T 3fv3_A 271 GNGAKITVPNTEYVYQNG--DGTCLWGIQP--SDDTILGDNFLRHAYLLYNLDANTISIAQVKY 330 (339)
T ss_dssp TTSCEEEEEGGGGEEECS--SSCEEESEEE--CSSCEECHHHHTTEEEEEETTTTEEEEEEBCC
T ss_pred CCCCEEEECHHHheeeCC--CCeEEEEEEe--CCcEEeChHHHhCEEEEEECCCCEEEEEecCC
Confidence 668999999999999764 34685 8877 45799999999999999999999999999998
No 19
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.2e-54 Score=443.16 Aligned_cols=303 Identities=22% Similarity=0.376 Sum_probs=253.7
Q ss_pred CCceeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCC----CccCCCCCccCCCCCCcccCCCCCC
Q 011045 141 PEDFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCT----ECYQQSDPIFDPKTSSSYSPLPCAA 216 (495)
Q Consensus 141 ~~~~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~----~C~~~~~~~f~p~~SsT~~~~~C~~ 216 (495)
......|+.+. .+.+|+++|.||||+|++.|++||||+++||+|..|. .|. .++.|||++|+||+...
T Consensus 5 ~~~~~~~l~n~---~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~--~~~~y~~~~SsT~~~~~--- 76 (341)
T 3k1w_A 5 NTTSSVILTNY---MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACV--YHKLFDASDSSSYKHNG--- 76 (341)
T ss_dssp CBCEEEEEEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHH--TSCCBCGGGCTTCEEEE---
T ss_pred CCCccccceEc---cCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCccc--CCCCCCCCcCcCeeECC---
Confidence 34567888874 3689999999999999999999999999999999998 464 67899999999999876
Q ss_pred ccccCCCCCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCC-c--cCcceeEeccCCCCCc-
Q 011045 217 PQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGL-F--VGSAGLLGLGGGMLSL- 292 (495)
Q Consensus 217 ~~C~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~-~--~~~~GIlGLg~~~~S~- 292 (495)
|.|.+.|++|+ ..|.+++|+|+|+ +..+ ++.|||++...+. + ...+||||||++.++.
T Consensus 77 ---------------~~~~i~Yg~gs-~~G~~~~D~v~ig-~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 138 (341)
T 3k1w_A 77 ---------------TELTLRYSTGT-VSGFLSQDIITVG-GITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIG 138 (341)
T ss_dssp ---------------EEEEEEETTEE-EEEEEEEEEEEET-TEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGG
T ss_pred ---------------CEEEEEECCcE-EEEEEEEEEEEEC-Ccee-eEEEEEEEEccccccccCCcceEEECCchhhccc
Confidence 89999999999 4699999999999 8999 9999999988764 3 4679999999988762
Q ss_pred ---------ccc--cCCCeEEEEecCCCC---CCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCee
Q 011045 293 ---------TKQ--IKATSLAYCLVDRDS---PASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQA 354 (495)
Q Consensus 293 ---------~sQ--l~~~~FS~~L~~~~~---~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~ 354 (495)
..| +..++||+||.+... ...|.|+||++|+. ++.|+|+.. ..+|.|.+++|+|+++.
T Consensus 139 ~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~ 214 (341)
T 3k1w_A 139 RVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKGVSVGSST 214 (341)
T ss_dssp GCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSS----TTSCEEEECCEEETTEE
T ss_pred CCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCC----CCEEEEEEeEEEECCEE
Confidence 333 558999999987541 23799999999976 899999975 37999999999999987
Q ss_pred eecCCCccccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcC
Q 011045 355 VQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGA 434 (495)
Q Consensus 355 ~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~g 434 (495)
+..+ ....+||||||++++||++++++|.+++++... ..+ |.++|.....+|+|+|+| +
T Consensus 215 ~~~~---------~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~----~~g-------~~~~C~~~~~~p~i~f~f-~ 273 (341)
T 3k1w_A 215 LLCE---------DGCLALVDTGASYISGSTSSIEKLMEALGAKKR----LFD-------YVVKCNEGPTLPDISFHL-G 273 (341)
T ss_dssp EECT---------TCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC----SSC-------EEEEGGGGGGCCCEEEEE-T
T ss_pred eecC---------CCCEEEEECCCChhcCCHHHHHHHHHHcCCeec----CCC-------eEEeCCCCCcCCcEEEEE-C
Confidence 5432 245799999999999999999999999976531 222 333444456799999999 7
Q ss_pred CcEEEeCCCCceEEecC-CCcEEE-EEEec-----CCCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 435 GKALDLPAKNYLIPVDS-AGTFCF-AFAPT-----SSALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 435 g~~~~lp~~~y~~~~~~-~g~~Cl-~~~~~-----~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
|++++||+++|+++... ++..|+ +|... ..+.||||+.|||++|+|||++++|||||+++
T Consensus 274 g~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 274 GKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp TEEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CEEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 99999999999987653 357898 78763 34679999999999999999999999999975
No 20
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.6e-53 Score=452.87 Aligned_cols=313 Identities=23% Similarity=0.419 Sum_probs=251.9
Q ss_pred eeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCC---CccCCCCCccCCCCCCcccCCCCCCcccc
Q 011045 144 FSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCT---ECYQQSDPIFDPKTSSSYSPLPCAAPQCK 220 (495)
Q Consensus 144 ~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~---~C~~~~~~~f~p~~SsT~~~~~C~~~~C~ 220 (495)
...|+.+. .+++|+++|.||||+|++.|+|||||+++||+|..|. .|. .++.|||++|+||+..+
T Consensus 42 ~~~~l~n~---~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~------- 109 (478)
T 1qdm_A 42 DIVALKNY---MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACY--LHSRYKAGASSTYKKNG------- 109 (478)
T ss_dssp CSGGGCCG---GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGG--GSCCBCGGGCTTCBCCC-------
T ss_pred ceEEeEec---cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCcccc--CCCCCCcccCCCeeeCC-------
Confidence 45677663 4689999999999999999999999999999999996 576 46799999999999877
Q ss_pred CCCCCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCC-c--cCcceeEeccCCCCCcc----
Q 011045 221 SLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGL-F--VGSAGLLGLGGGMLSLT---- 293 (495)
Q Consensus 221 ~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~-~--~~~~GIlGLg~~~~S~~---- 293 (495)
|.|.+.|++|+. .|.+++|+|+|+ +..++++.|||++...+. | ..++||||||++.++..
T Consensus 110 -----------~~~~i~Yg~Gs~-~G~~~~Dtv~ig-~~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p 176 (478)
T 1qdm_A 110 -----------KPAAIQYGTGSI-AGYFSEDSVTVG-DLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVP 176 (478)
T ss_dssp -----------CEEEEEETTEEE-EEEEEEEEEEET-TEEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCC
T ss_pred -----------cEEEEEcCCCCe-EEEEEEEEEEEC-CeEECCEEEEEEEecCCcccccccccceecccccccccCCCCc
Confidence 789999999985 599999999999 899999999999987663 3 56899999999988743
Q ss_pred ------cc--cCCCeEEEEecCCC-CCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCC
Q 011045 294 ------KQ--IKATSLAYCLVDRD-SPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPS 360 (495)
Q Consensus 294 ------sQ--l~~~~FS~~L~~~~-~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~ 360 (495)
+| +..++||+||.+.. ....|.|+||++|+. ++.|+|+... ++|+|.|++|+||++.+.++
T Consensus 177 ~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~----~~w~v~l~~i~v~g~~~~~~-- 250 (478)
T 1qdm_A 177 VWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK----GYWQFDMGDVLVGGKSTGFC-- 250 (478)
T ss_dssp HHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE----TTEEEEECCEEETTEECSTT--
T ss_pred HHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCC----CeEEEEEeEEEECCEEEeec--
Confidence 33 44799999997652 234799999999986 7999999863 79999999999999887643
Q ss_pred ccccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhh----------------------cCCC-----------CCCC
Q 011045 361 LFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLA----------------------GNLK-----------PTSG 407 (495)
Q Consensus 361 ~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~----------------------~~~~-----------~~~~ 407 (495)
.+.+.+||||||++++||.++|++|.+++++.. ...+ ...+
T Consensus 251 ------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~ 324 (478)
T 1qdm_A 251 ------AGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDG 324 (478)
T ss_dssp ------TTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC----
T ss_pred ------CCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCc
Confidence 234679999999999999999999999986431 0000 0000
Q ss_pred ----------------------------------------------------Ccccccccc---------cCCCcccccc
Q 011045 408 ----------------------------------------------------VALFDTCYD---------FSGLRSVRVP 426 (495)
Q Consensus 408 ----------------------------------------------------~~~~~~C~~---------~~~~~~~~~P 426 (495)
....+.|+. ++|.....+|
T Consensus 325 ~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~~lP 404 (478)
T 1qdm_A 325 TRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMP 404 (478)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGTTCC
T ss_pred cccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccccccc
Confidence 001234544 3444456799
Q ss_pred eEEEEEcCCcEEEeCCCCceEEecCC-CcEEE-EEEecC-----CCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 427 TVSLHFGAGKALDLPAKNYLIPVDSA-GTFCF-AFAPTS-----SALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 427 ~ltf~f~gg~~~~lp~~~y~~~~~~~-g~~Cl-~~~~~~-----~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
+|+|+| ||+.|+|+|++|+++...+ +..|+ +|...+ ++.||||+.|||++|+|||++|+|||||++.
T Consensus 405 ~i~f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 405 DIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp CEEEEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cEEEEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 999999 8999999999999987642 35898 577542 4579999999999999999999999999863
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=7.1e-54 Score=443.18 Aligned_cols=297 Identities=23% Similarity=0.366 Sum_probs=250.9
Q ss_pred eeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCC
Q 011045 144 FSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLD 223 (495)
Q Consensus 144 ~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~ 223 (495)
...|+.+ ..+++|+++|.||||+|++.|+|||||+++||+|.+|..+.|..++.|||++|+||+..+
T Consensus 52 ~~~pl~~---~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~---------- 118 (375)
T 1miq_A 52 DVIELDD---VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDG---------- 118 (375)
T ss_dssp BCCCGGG---TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEEE----------
T ss_pred ceEEccc---CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCCCcCCCccCCceEECC----------
Confidence 4567775 246899999999999999999999999999999999985444568899999999999876
Q ss_pred CCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEec----CCCCc--cCcceeEeccCCCCCccc---
Q 011045 224 VSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHD----NEGLF--VGSAGLLGLGGGMLSLTK--- 294 (495)
Q Consensus 224 ~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~----~~g~~--~~~~GIlGLg~~~~S~~s--- 294 (495)
|.|.+.|++|+. .|.+++|+|+|+ +..+++ .|||++. .. .| ...+||||||++.++...
T Consensus 119 --------~~~~i~Yg~Gs~-~G~~~~Dtv~ig-~~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~ 186 (375)
T 1miq_A 119 --------TKVDITYGSGTV-KGFFSKDLVTLG-HLSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDP 186 (375)
T ss_dssp --------EEEEEEETTEEE-EEEEEEEEEEET-TEEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCC
T ss_pred --------cEEEEEeCCCeE-EEEEEEEEEEEc-CceECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCC
Confidence 899999999995 599999999999 899999 9999998 54 44 568999999999887542
Q ss_pred -------c--cCCCeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCc
Q 011045 295 -------Q--IKATSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSL 361 (495)
Q Consensus 295 -------Q--l~~~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~ 361 (495)
| +..++||+||.+.+ ...|.|+||++|+. ++.|+|+.. .++|.|.|+ |+||++.+
T Consensus 187 ~~~~l~~qg~i~~~~FS~~L~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~-i~v~g~~~------ 254 (375)
T 1miq_A 187 IVVELKNQNKIDNALFTFYLPVHD-VHAGYLTIGGIEEKFYEGNITYEKLNH----DLYWQIDLD-VHFGKQTM------ 254 (375)
T ss_dssp HHHHHHHTTSSSSSEEEEECCTTC-TTEEEEEESSCCGGGEEEEEEEEEBSS----SSSSEEEEE-EEETTEEE------
T ss_pred HHHHHHhccCcCCCEEEEEecCCC-CCCeEEEEcccCHHHcCCceEEEecCC----CceEEEEEE-EEECCEEc------
Confidence 3 45899999998753 35899999999975 799999975 379999999 99999876
Q ss_pred cccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeC
Q 011045 362 FEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLP 441 (495)
Q Consensus 362 ~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp 441 (495)
..+.+||||||++++||+++|++|.+++++.. +...+. +...|+. ..+|+|+|+| ||++++||
T Consensus 255 ------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~---~~~~g~-~~~~C~~------~~~P~i~f~f-~g~~~~l~ 317 (375)
T 1miq_A 255 ------EKANVIVDSGTTTITAPSEFLNKFFANLNVIK---VPFLPF-YVTTCDN------KEMPTLEFKS-ANNTYTLE 317 (375)
T ss_dssp ------EEEEEEECTTBSSEEECHHHHHHHHHHHTCEE---CTTSSC-EEEETTC------TTCCCEEEEC-SSCEEEEC
T ss_pred ------ccceEEecCCCccEEcCHHHHHHHHHHhCCcc---cCCCCe-EEEECCC------CCCCcEEEEE-CCEEEEEC
Confidence 12569999999999999999999999997642 222332 2345653 5789999999 89999999
Q ss_pred CCCceEEecC-CCcEEE-EEEecC--CCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 442 AKNYLIPVDS-AGTFCF-AFAPTS--SALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 442 ~~~y~~~~~~-~g~~Cl-~~~~~~--~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
+++|+++... ++..|+ +|.+.+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 318 ~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 318 PEYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp GGGSEEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred HHHhEeeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 9999998653 346898 888774 3689999999999999999999999999874
No 22
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=6e-54 Score=452.18 Aligned_cols=298 Identities=20% Similarity=0.303 Sum_probs=249.8
Q ss_pred eeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCC
Q 011045 144 FSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLD 223 (495)
Q Consensus 144 ~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~ 223 (495)
...|+.+. .+++|+++|.||||+|++.|++||||+++||+|.+|..+.|+.++.|||++|+||+..+
T Consensus 128 ~~~~L~n~---~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~~---------- 194 (453)
T 2bju_A 128 DNIELVDF---QNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKDG---------- 194 (453)
T ss_dssp EEEEEEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEEE----------
T ss_pred CceeeEec---CCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeECC----------
Confidence 45777652 46899999999999999999999999999999999985555578999999999999876
Q ss_pred CCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCC--CC-c--cCcceeEeccCCCCCccc----
Q 011045 224 VSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNE--GL-F--VGSAGLLGLGGGMLSLTK---- 294 (495)
Q Consensus 224 ~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~--g~-~--~~~~GIlGLg~~~~S~~s---- 294 (495)
|.|.+.|++|+. .|.+++|+|+|+ +..++ +.|||++... +. + ...+||||||++.++...
T Consensus 195 --------~~~~i~YgdGs~-~G~~~~Dtv~ig-~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~ 263 (453)
T 2bju_A 195 --------TKVEMNYVSGTV-SGFFSKDLVTVG-NLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPI 263 (453)
T ss_dssp --------EEEEEECSSSEE-EEEEEEEEEEET-TEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCH
T ss_pred --------cEEEEEcCCCCe-EEEEEEEEEEEe-CcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcH
Confidence 899999999995 599999999999 89999 9999999886 53 3 578999999998876542
Q ss_pred ------c--cCCCeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCcc
Q 011045 295 ------Q--IKATSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLF 362 (495)
Q Consensus 295 ------Q--l~~~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~ 362 (495)
| +..++||+||.+. +...|.|+||++|+. ++.|+|+... ++|.|.|+ |+||+ .+ +
T Consensus 264 ~~~L~~qg~i~~~~FS~~L~~~-~~~~G~l~fGg~D~~~y~G~l~~~pv~~~----~~w~V~l~-I~Vgg-~~-~----- 330 (453)
T 2bju_A 264 VVELKNQNKIENALFTFYLPVH-DKHTGFLTIGGIEERFYEGPLTYEKLNHD----LYWQITLD-AHVGN-IM-L----- 330 (453)
T ss_dssp HHHHHHTTSSSSCEEEEECCBT-TTBCEEEEESSCCGGGEEEEEEEEEEEEE----TTEEEEEE-EEETT-EE-E-----
T ss_pred HHHHHHCCCCCCCEEEEEeCCC-CCCCeEEEECCCCHHHcCCceEEEecCCC----ceEEEEEE-EEECc-EE-e-----
Confidence 3 4579999999875 334899999999975 7999999863 79999999 99999 33 1
Q ss_pred ccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCC
Q 011045 363 EMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPA 442 (495)
Q Consensus 363 ~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~ 442 (495)
..+.+||||||++++||+++|++|.+++++. +...+..+...|+. ..+|+|+|+| ||++++||+
T Consensus 331 -----~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~----~~~~g~~~~v~C~~------~~~P~itf~f-gg~~~~l~~ 394 (453)
T 2bju_A 331 -----EKANCIVDSGTSAITVPTDFLNKMLQNLDVI----KVPFLPFYVTLCNN------SKLPTFEFTS-ENGKYTLEP 394 (453)
T ss_dssp -----EEEEEEECTTCCSEEECHHHHHHHTTTSSCE----ECTTSSCEEEETTC------TTCCCEEEEC-SSCEEEECH
T ss_pred -----ccccEEEcCCCCeEecCHHHHHHHHHHhCCc----ccCCCceEEEecCC------CCCCcEEEEE-CCEEEEECH
Confidence 1357999999999999999999999988653 12223123344653 5789999999 899999999
Q ss_pred CCceEEecC-CCcEEE-EEEecC--CCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 443 KNYLIPVDS-AGTFCF-AFAPTS--SALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 443 ~~y~~~~~~-~g~~Cl-~~~~~~--~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
++|+++... ++..|+ +|.+.+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 395 ~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 395 EYYLQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp HHHEEECTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred HHhEeecccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999998753 346898 788764 3589999999999999999999999999864
No 23
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.9e-53 Score=431.96 Aligned_cols=291 Identities=21% Similarity=0.344 Sum_probs=243.9
Q ss_pred CceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCCCCcCCCCcce
Q 011045 155 GSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLY 234 (495)
Q Consensus 155 ~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~c~y 234 (495)
.+++|+++|.|| +|++.|++||||+++||+|.+|..|.++.++.|||++|+ ++... |.|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~------------------~~~ 70 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKLSG------------------YSW 70 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EECTT------------------CBE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-CccCC------------------CEE
Confidence 468999999999 999999999999999999999999988889999999998 66444 899
Q ss_pred eeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCCc---cCcceeEeccCCCCCc-------------ccccCC
Q 011045 235 QVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLF---VGSAGLLGLGGGMLSL-------------TKQIKA 298 (495)
Q Consensus 235 ~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~~---~~~~GIlGLg~~~~S~-------------~sQl~~ 298 (495)
.+.|++|+...|.+++|+|+|+ +..++++.|||++...+.+ ...+||||||++.++. .+|+..
T Consensus 71 ~i~Yg~Gs~~~G~~~~D~v~ig-~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~i~~ 149 (325)
T 1ibq_A 71 DISYGDGSSASGDVYRDTVTVG-GVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQLDS 149 (325)
T ss_dssp EEECSSSCEEEEEEEEEEEEET-TEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGGSSS
T ss_pred EEEeCCCCEEEEEEEEeEEEEC-CEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHhcCC
Confidence 9999999977799999999999 8999999999999876644 3689999999987664 235668
Q ss_pred CeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEE
Q 011045 299 TSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIV 374 (495)
Q Consensus 299 ~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~ii 374 (495)
++||+||.+. ..|.|+||++|+. ++.|+|+... .++|.|.|++|+||++.+. .....+||
T Consensus 150 ~~FS~~l~~~---~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~~~~~----------~~~~~aii 213 (325)
T 1ibq_A 150 PLFAVQLKHD---APGVYDFGYIDDSKYTGSITYTDADSS---QGYWGFSTDGYSIGDGSSS----------SSGFSAIA 213 (325)
T ss_dssp SEEEEEEETT---EEEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEECEEEETTSCCB----------SCCEEEEE
T ss_pred cEEEEEecCC---CCceEEECCcChhhccCceEEEEcCCC---CceEEEEECcEEECCeecc----------CCCceEEE
Confidence 9999999752 3799999999975 8999999753 4789999999999998653 12457999
Q ss_pred ccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCCCCceEEecC-CC
Q 011045 375 DCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDS-AG 453 (495)
Q Consensus 375 DSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~~~y~~~~~~-~g 453 (495)
||||++++||+++|++|.+++.... +....+.. ...|+ ..+|+|+|+| ||++++||+++|+++... +.
T Consensus 214 DSGTt~~~lP~~~~~~i~~~i~~a~--~~~~~g~~-~~~C~-------~~~P~i~f~f-gg~~~~i~~~~~~~~~~~~~~ 282 (325)
T 1ibq_A 214 DTGTTLILLDDEIVSAYYEQVSGAQ--ESYEAGGY-VFSCS-------TDLPDFTVVI-GDYKAVVPGKYINYAPVSTGS 282 (325)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCB--CCSSSSSC-EEETT-------CCCCCEEEEE-TTEEEEECHHHHEEEESSTTC
T ss_pred eCCCCcEeCCHHHHHHHHHhCCCce--EcCcCCeE-EEEcC-------CCCCcEEEEE-CCEEEEECHHHhcccccCCCC
Confidence 9999999999999999999984321 11122322 22465 3689999999 899999999999987643 23
Q ss_pred cEEEE-EEecC-CCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 454 TFCFA-FAPTS-SALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 454 ~~Cl~-~~~~~-~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
..|++ |.+.+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 283 ~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 283 STCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp SEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 78984 76653 4689999999999999999999999999874
No 24
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.3e-53 Score=435.78 Aligned_cols=299 Identities=22% Similarity=0.394 Sum_probs=242.5
Q ss_pred eeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCC--CCCc-------cCCCCCccCCCCCCcccCCCC
Q 011045 144 FSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRP--CTEC-------YQQSDPIFDPKTSSSYSPLPC 214 (495)
Q Consensus 144 ~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~--C~~C-------~~~~~~~f~p~~SsT~~~~~C 214 (495)
+.+|+.+. +++|+++|.||||+|++.|++||||+++||+|.. |..| .|..++.|||++|+||+..+
T Consensus 3 v~~~l~~~----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~- 77 (342)
T 3pvk_A 3 VPVTLHNE----QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLN- 77 (342)
T ss_dssp EEEEEEEC----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEE-
T ss_pred cceEEecC----CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecC-
Confidence 45566553 5899999999999999999999999999998653 5322 12357899999999999887
Q ss_pred CCccccCCCCCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCCccCcceeEeccCCCC----
Q 011045 215 AAPQCKSLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLFVGSAGLLGLGGGML---- 290 (495)
Q Consensus 215 ~~~~C~~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~~~~~~GIlGLg~~~~---- 290 (495)
|.|.+.|++|+...|.+++|+|+|+ +..++++.|||++... ..+||||||++.+
T Consensus 78 -----------------~~~~i~Yg~gs~~~G~~~~D~v~ig-~~~v~~~~fg~~~~~~----~~~GilGLg~~~~~~~~ 135 (342)
T 3pvk_A 78 -----------------TPFKIGYGDGSSSQGTLYKDTVGFG-GVSIKNQVLADVDSTS----IDQGILGVGYKTNEAGG 135 (342)
T ss_dssp -----------------EEEEEECSSSCEEEEEEEEEEEEET-TEEEEEEEEEEEEEES----SSSCEEECSCGGGCSSC
T ss_pred -----------------CeEEEEecCCCeEEEEEEEEEEEEC-CEEecceEEEEEEccC----CCccEEEecCccccccc
Confidence 8999999999977799999999999 9999999999999875 4799999999874
Q ss_pred ---Cccccc------CCCeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeec
Q 011045 291 ---SLTKQI------KATSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQI 357 (495)
Q Consensus 291 ---S~~sQl------~~~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i 357 (495)
+++.|| ..++||+||.+.. ...|.|+||++|+. ++.|+|+... .+|.|.|++|+|+++.+..
T Consensus 136 ~~~~~~~~L~~qg~i~~~~fs~~l~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~ 210 (342)
T 3pvk_A 136 SYDNVPVTLKKQGVIAKNAYSLYLNSPD-AATGQIIFGGVDNAKYSGSLIALPVTSD----RELRISLGSVEVSGKTINT 210 (342)
T ss_dssp SSCCHHHHHHHTTSSSSSEEEEECCCTT-CSEEEEEETEEETTSBSSCCEEEECCCS----SSCEEEEEEEEETTEEEEE
T ss_pred cCCcHHHHHHhcCCCCCceEEEEeCCCC-CCCcEEEECccCccceeeeeEEeecCcc----ceEEEEEeEEEECCEEecC
Confidence 444443 3689999997643 34799999999976 8999999875 5899999999999998764
Q ss_pred CCCccccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcE
Q 011045 358 PPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKA 437 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~ 437 (495)
+ ...+||||||++++||+++|++|.+++++..... ..+. .+|.++|.. .|+|+|+|.+|++
T Consensus 211 ~----------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~--~~~~----~~~~~~C~~---~p~i~f~f~~g~~ 271 (342)
T 3pvk_A 211 D----------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQD--SNGN----SFYEVDCNL---SGDVVFNFSKNAK 271 (342)
T ss_dssp E----------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEEC--TTSC----EEEEECSCC---CSEEEEEESTTCE
T ss_pred C----------CceEEEeCCCCCeecCHHHHHHHHHHcCCeeccc--CCCc----eEEEEecCC---CCceEEEECCCCE
Confidence 2 2468999999999999999999999997654311 1111 123334442 5999999965899
Q ss_pred EEeCCCCceEEecC-CC---cEEE-EEEecCCCceeecHHhhcceEEEEeCCCCEEEEeeCCC
Q 011045 438 LDLPAKNYLIPVDS-AG---TFCF-AFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC 495 (495)
Q Consensus 438 ~~lp~~~y~~~~~~-~g---~~Cl-~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 495 (495)
++||+++|+++... ++ ..|+ +|.+. +.||||+.|||++|++||++++|||||+++|
T Consensus 272 ~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~--~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~ 332 (342)
T 3pvk_A 272 ISVPASEFAASLQGDDGQPYDKCQLLFDVN--DANILGDNFLRSAYIVYDLDDNEISLAQVKY 332 (342)
T ss_dssp EEEEGGGGEEC----------CEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEBCC
T ss_pred EEEcHHHheeeccccCCCcCCeeEEEEeeC--CCeEeCHHHHhcEEEEEECCCCEEEEEecCC
Confidence 99999999987421 23 6798 56553 5799999999999999999999999999998
No 25
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.3e-53 Score=432.16 Aligned_cols=298 Identities=15% Similarity=0.243 Sum_probs=248.6
Q ss_pred eeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCC--CccCCCCCccCCCCCCcccCCCCCCccccC
Q 011045 144 FSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCT--ECYQQSDPIFDPKTSSSYSPLPCAAPQCKS 221 (495)
Q Consensus 144 ~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~--~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~ 221 (495)
+..|+.+. .+.+|+++|.|| +|++.|++||||+++||+|.+|. .|.++.++.|||++| ||+..+
T Consensus 7 ~~~~l~n~---~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~-------- 72 (330)
T 1yg9_A 7 LYKLVHVF---INTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG-------- 72 (330)
T ss_dssp SCSCEEEE---ECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE--------
T ss_pred eEeeeecC---CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC--------
Confidence 44566653 357899999999 99999999999999999999998 685567899999999 999876
Q ss_pred CCCCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCCc--cCcceeEeccCCCCC--------
Q 011045 222 LDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLF--VGSAGLLGLGGGMLS-------- 291 (495)
Q Consensus 222 ~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~~--~~~~GIlGLg~~~~S-------- 291 (495)
+.|.+.|++|+. .|.+++|+|+|+ +..++++.|||++.....| ...+||||||++.++
T Consensus 73 ----------~~~~i~Yg~Gs~-~G~~~~Dtv~ig-~~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~ 140 (330)
T 1yg9_A 73 ----------NVQVKFFDTGSA-VGRGIEDSLTIS-QLTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTV 140 (330)
T ss_dssp ----------EEEEEETTTEEE-EEEEEEEEEEET-TEEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCH
T ss_pred ----------CEEEEEECCceE-EEEEEEEEEEEC-CEEEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCH
Confidence 889999999998 699999999999 8999999999999874334 468999999999887
Q ss_pred ---cccc--cCCCeEEEEecCCCCC-CcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCc
Q 011045 292 ---LTKQ--IKATSLAYCLVDRDSP-ASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSL 361 (495)
Q Consensus 292 ---~~sQ--l~~~~FS~~L~~~~~~-~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~ 361 (495)
+.+| + .++||+||.+..+. ..|.|+||++|+. ++.|+|+.. .++|.|.|++|+|+++.+.
T Consensus 141 ~~~l~~qg~i-~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~----- 210 (330)
T 1yg9_A 141 LENFVEENLI-APVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVG----DDSWKFRLDGVKIGDTTVA----- 210 (330)
T ss_dssp HHHHHHTTSS-CSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSC----TTSCCEECSEEEETTEEEE-----
T ss_pred HHHHHhcCCC-CceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCC----CCEEEEEeCeEEECCEEEc-----
Confidence 2233 5 89999999875322 2799999999975 799999984 4799999999999998764
Q ss_pred cccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCccccccc-ccCCCcccccceEEEEEcCCcEEEe
Q 011045 362 FEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCY-DFSGLRSVRVPTVSLHFGAGKALDL 440 (495)
Q Consensus 362 ~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~-~~~~~~~~~~P~ltf~f~gg~~~~l 440 (495)
.....+||||||++++||+++|++|.+++++... ..+. ..| .++|.....+|+|+|+| ||++++|
T Consensus 211 -----~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~----~~g~----~~~~~~~C~~~~~~p~i~f~f-gg~~~~l 276 (330)
T 1yg9_A 211 -----PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE----KTTT----RRICKLDCSKIPSLPDVTFVI-NGRNFNI 276 (330)
T ss_dssp -----CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE----ECSS----CEEEEECGGGGGGSCCEEEEE-TTEEEEE
T ss_pred -----CCCcEEEEecCCccccCCHHHHHHHHHHhCCccc----CCCc----eEEEEEECCCccccCcEEEEE-CCEEEEE
Confidence 1245799999999999999999999999965421 1220 012 34444456799999999 8999999
Q ss_pred CCCCceEEecCCCcEEE-EEEec-CCCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 441 PAKNYLIPVDSAGTFCF-AFAPT-SSALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 441 p~~~y~~~~~~~g~~Cl-~~~~~-~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
|+++|+++. +..|+ +|.+. ..+.||||+.|||++|+|||++++|||||+++
T Consensus 277 ~~~~y~~~~---~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 277 SSQYYIQQN---GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp CHHHHEEEE---TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CHHHhcccC---CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 999999976 46898 77764 34689999999999999999999999999875
No 26
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.9e-53 Score=431.48 Aligned_cols=289 Identities=20% Similarity=0.330 Sum_probs=242.8
Q ss_pred CceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCCCCcCCCCcce
Q 011045 155 GSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLY 234 (495)
Q Consensus 155 ~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~c~y 234 (495)
.+++|+++|.|| +|++.|+|||||+++||+|.+|..|.++.++.|||++|+ ++... |.|
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~------------------~~~ 71 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKIDG------------------ATW 71 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEEEE------------------EEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-CccCC------------------CeE
Confidence 368999999999 899999999999999999999999988889999999998 66444 899
Q ss_pred eeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCCc---cCcceeEeccCCCCCcc-------------cccCC
Q 011045 235 QVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLF---VGSAGLLGLGGGMLSLT-------------KQIKA 298 (495)
Q Consensus 235 ~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~~---~~~~GIlGLg~~~~S~~-------------sQl~~ 298 (495)
.+.|++|+...|.+++|+|+|+ +..++++.|||++...+.+ ...+||||||++.++.. +|+..
T Consensus 72 ~i~Yg~Gs~~~G~~~~D~v~ig-~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~i~~ 150 (323)
T 1izd_A 72 SISYGDGSSASGDVYKDKVTVG-GVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSSLSE 150 (323)
T ss_dssp EEECTTSCEEEEEEEEEEEEET-TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGGSSS
T ss_pred EEEcCCCCeEEEEEEEEEEEEC-CEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHhccC
Confidence 9999999977799999999999 8999999999999876644 46899999999877652 35668
Q ss_pred CeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEE
Q 011045 299 TSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIV 374 (495)
Q Consensus 299 ~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~ii 374 (495)
++||+||.+. ..|.|+||++|+. ++.|+|+... .++|.|.+++|+||+ .+. .....+||
T Consensus 151 ~~FS~~L~~~---~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~-~~~----------~~~~~aii 213 (323)
T 1izd_A 151 PIFAVALKHN---APGVYDFGYTDSSKYTGSITYTDVDNS---QGFWGFTADGYSIGS-DSS----------SDSITGIA 213 (323)
T ss_dssp SEEEEECCTT---SCEEEEESSCCTTSEEEEEEEEECBCT---TSSCEEEESEEEETT-EEE----------CCCEEEEE
T ss_pred cEEEEEccCC---CCCEEEECCcCccccccceEEEECCCC---CceEEEEECeEEECC-ccc----------CCCceEEE
Confidence 9999999752 3799999999986 7999999753 478999999999999 543 12457999
Q ss_pred ccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCCCCceEEecCCCc
Q 011045 375 DCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGT 454 (495)
Q Consensus 375 DSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~~~y~~~~~~~g~ 454 (495)
||||++++||+++|++|.+++.... +....+... ..|+ ..+|+|+|+| ||++++||+++|+++.. ++.
T Consensus 214 DSGTs~~~lp~~~~~~i~~~i~ga~--~~~~~g~~~-~~C~-------~~~P~i~f~f-gg~~~~i~~~~~~~~~~-~~~ 281 (323)
T 1izd_A 214 DTGTTLLLLDDSIVDAYYEQVNGAS--YDSSQGGYV-FPSS-------ASLPDFSVTI-GDYTATVPGEYISFADV-GNG 281 (323)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCE--EETTTTEEE-EETT-------CCCCCEEEEE-TTEEEEECHHHHEEEEC-STT
T ss_pred eCCCcceeCCHHHHHHHHHhCCCcE--EcCcCCEEE-EECC-------CCCceEEEEE-CCEEEecCHHHeEEecC-CCC
Confidence 9999999999999999999884321 111222222 2364 3689999999 89999999999998764 367
Q ss_pred EEEE-EEecC-CCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 455 FCFA-FAPTS-SALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 455 ~Cl~-~~~~~-~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
.|++ |.+.+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 282 ~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 282 QTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp EEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 8995 77753 4689999999999999999999999999864
No 27
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=7.1e-53 Score=436.88 Aligned_cols=306 Identities=23% Similarity=0.395 Sum_probs=245.4
Q ss_pred ceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCCCCcCCCCccee
Q 011045 156 SGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQ 235 (495)
Q Consensus 156 ~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~c~y~ 235 (495)
+..|+++|.||||+|++.|+|||||+++||+|.+|..| ++.|||++|+||+..+ |.|.
T Consensus 12 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~----~~~f~~~~SsT~~~~~------------------~~~~ 69 (383)
T 2ewy_A 12 GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI----DTYFDTERSSTYRSKG------------------FDVT 69 (383)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB----SCCCCGGGCTTCEEEE------------------EEEE
T ss_pred CCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc----ccCcccccCccceeCC------------------ceEE
Confidence 45799999999999999999999999999999999776 4789999999999887 8999
Q ss_pred eecCCCceEEEEEEEEEEEECCCcccc-ceEEeEEecCCCCc---cCcceeEeccCCCCCc------------ccccC-C
Q 011045 236 VAYGDGSFTVGDLVTETVSFGNSGSVK-GIALGCGHDNEGLF---VGSAGLLGLGGGMLSL------------TKQIK-A 298 (495)
Q Consensus 236 ~~Ygdgs~~~G~~~~Dtlt~g~~~~v~-~~~fG~~~~~~g~~---~~~~GIlGLg~~~~S~------------~sQl~-~ 298 (495)
+.|++|+. .|.+++|+|+|++..... .+.|+|..+..+.| ...+||||||++.++. .+|.. .
T Consensus 70 i~Yg~Gs~-~G~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i~ 148 (383)
T 2ewy_A 70 VKYTQGSW-TGFVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANIP 148 (383)
T ss_dssp EECSSCEE-EEEEEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTCC
T ss_pred EEECCcEE-EEEEEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCCC
Confidence 99999997 599999999998332222 36788887666555 3579999999988754 23422 6
Q ss_pred CeEEEEecCC------CCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCC
Q 011045 299 TSLAYCLVDR------DSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAG 368 (495)
Q Consensus 299 ~~FS~~L~~~------~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~ 368 (495)
++||+||... .....|.|+||++|+. ++.|+|+... .+|+|.|++|+||++.+.++...+ .
T Consensus 149 ~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~~~~~~-----~ 219 (383)
T 2ewy_A 149 NVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE----WYYQIEILKLEIGGQSLNLDCREY-----N 219 (383)
T ss_dssp SCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB----TTBBCCEEEEEETTEECCCCTTTT-----T
T ss_pred cceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC----ceEEEEEEEEEECCEEcccccccc-----C
Confidence 8999999641 1234799999999964 8999999864 689999999999999987665443 2
Q ss_pred CCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCC-CC--cccccccccCCCcccccceEEEEEcCC-----cEEEe
Q 011045 369 DGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTS-GV--ALFDTCYDFSGLRSVRVPTVSLHFGAG-----KALDL 440 (495)
Q Consensus 369 ~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~-~~--~~~~~C~~~~~~~~~~~P~ltf~f~gg-----~~~~l 440 (495)
...+||||||++++||+++|++|++++.+.... +... +. .....|+..+......+|+|+|+|.|+ .+++|
T Consensus 220 ~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~-~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l 298 (383)
T 2ewy_A 220 ADKAIVDSGTTLLRLPQKVFDAVVEAVARASLI-PEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITI 298 (383)
T ss_dssp SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCS-SCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEE
T ss_pred CccEEEEcCCccccCCHHHHHHHHHHHhhhccc-ccCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEE
Confidence 457999999999999999999999999886531 1111 11 134579876544445799999999543 37999
Q ss_pred CCCCceEEecC--CCcEEEEE--EecCCCceeecHHhhcceEEEEeCCCCEEEEeeCCC
Q 011045 441 PAKNYLIPVDS--AGTFCFAF--APTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC 495 (495)
Q Consensus 441 p~~~y~~~~~~--~g~~Cl~~--~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 495 (495)
|+++|+++... .+..|++| .+. .+.||||+.|||++|+|||++++|||||+++|
T Consensus 299 ~~~~yi~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c 356 (383)
T 2ewy_A 299 LPQLYIQPMMGAGLNYECYRFGISPS-TNALVIGATVMEGFYVIFDRAQKRVGFAASPC 356 (383)
T ss_dssp CHHHHEEEECCCTTCSEEEEESEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEECTT
T ss_pred ChHHheeecccCCCCceeEEEEecCC-CCcEEEChHHhCCeeEEEECCCCeEEEEeccC
Confidence 99999998642 35689854 443 45799999999999999999999999999999
No 28
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=4.3e-53 Score=445.98 Aligned_cols=298 Identities=20% Similarity=0.290 Sum_probs=249.5
Q ss_pred ceeeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCC
Q 011045 143 DFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSL 222 (495)
Q Consensus 143 ~~~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~ 222 (495)
....|+.+. .+.+|+++|.||||||++.|++||||+++||+|..|....|..++.|||++|+||+..+
T Consensus 126 ~~~~pL~n~---~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~~~ydps~SsT~~~~~--------- 193 (451)
T 3qvc_A 126 FDNVELKDL---ANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEKDD--------- 193 (451)
T ss_dssp -CCCCGGGG---BCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE---------
T ss_pred CCccceeec---CCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCCCCCCCCCCcccccCC---------
Confidence 345677763 36899999999999999999999999999999999964333567899999999999876
Q ss_pred CCCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEec----CCCCc--cCcceeEeccCCCCCc----
Q 011045 223 DVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHD----NEGLF--VGSAGLLGLGGGMLSL---- 292 (495)
Q Consensus 223 ~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~----~~g~~--~~~~GIlGLg~~~~S~---- 292 (495)
|.|.+.|++|+ ..|.+++|+|+|+ +..++ +.|||++. ..+ + ...+||||||++.++.
T Consensus 194 ---------~~f~i~YgdGs-~~G~~~~Dtv~ig-g~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~~ 260 (451)
T 3qvc_A 194 ---------TPVKLTSKAGT-ISGIFSKDLVTIG-KLSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSID 260 (451)
T ss_dssp ---------EEEEEECSSEE-EEEEEEEEEEEET-TEEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCCC
T ss_pred ---------CEEEEEECCCE-EEEEEEEEEEEEC-CEEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCCC
Confidence 89999999999 5699999999999 99999 99999998 666 5 4679999999987653
Q ss_pred ------ccc--cCCCeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCC
Q 011045 293 ------TKQ--IKATSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPS 360 (495)
Q Consensus 293 ------~sQ--l~~~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~ 360 (495)
..| +..++||+||.+.. ...|.|+|||+|+. ++.|+|+.. +++|.|.++ |+||++ .
T Consensus 261 ~~~~~L~~qg~I~~~~FS~~L~~~~-~~~G~l~fGgiD~s~y~G~l~~~pv~~----~~~w~v~l~-I~Vgg~-~----- 328 (451)
T 3qvc_A 261 PYIVELKTQNKIEQAVYSIYLPPEN-KNKGYLTIGGIEERFFDGPLNYEKLNH----DLMWQVDLD-VHFGNV-S----- 328 (451)
T ss_dssp CHHHHHHHTTSSSSSEEEEECCTTC-TTEEEEEESSCCGGGEEEEEEEEECSS----TTSSEEEEE-EEETTE-E-----
T ss_pred CHHHHHHHcCCCCCCEEEEEEcCCC-CCCCEEEECCcchhhcCCceEEEEccc----CCeeEEEEE-EEECCc-c-----
Confidence 223 55889999998763 34899999999986 899999985 479999999 999998 1
Q ss_pred ccccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEe
Q 011045 361 LFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDL 440 (495)
Q Consensus 361 ~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~l 440 (495)
.....+||||||++++||++++++|.+++++... ...+ +|.++|. ...+|+|+|+| ||.+++|
T Consensus 329 ------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~---~~~g------~y~v~C~-~~~~P~itf~f-gg~~i~l 391 (451)
T 3qvc_A 329 ------SKKANVILDSATSVITVPTEFFNQFVESASVFKV---PFLS------LYVTTCG-NTKLPTLEYRS-PNKVYTL 391 (451)
T ss_dssp ------EEEEEEEECTTBSSEEECHHHHHHHHTTTTCEEC---TTSS------CEEEETT-CTTCCCEEEEE-TTEEEEE
T ss_pred ------CCCceEEEeCCCccccCCHHHHHHHHHHcCCeec---CCCC------eEEeeCC-cCcCCcEEEEE-CCEEEEE
Confidence 1235699999999999999999999999865422 1112 2445555 46799999999 8999999
Q ss_pred CCCCceEEecC-CCcEEE-EEEecC--CCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 441 PAKNYLIPVDS-AGTFCF-AFAPTS--SALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 441 p~~~y~~~~~~-~g~~Cl-~~~~~~--~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
|+++|+++... ++..|+ +|.+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 392 p~~~yi~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 392 EPKQYLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp CHHHHEEECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred cHHHheeecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99999998653 346898 787765 5689999999999999999999999999875
No 29
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.3e-53 Score=432.81 Aligned_cols=289 Identities=20% Similarity=0.371 Sum_probs=241.7
Q ss_pred CceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCCCCcCCCCcce
Q 011045 155 GSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLY 234 (495)
Q Consensus 155 ~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~c~y 234 (495)
.+++|+++|.|| +|++.|+|||||+++||+|.+|..|.++.++.|||++|+ ++... |.|
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~------------------~~~ 71 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KELSG------------------YTW 71 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEEEE------------------EEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-cccCC------------------CeE
Confidence 368999999999 999999999999999999999999988889999999998 66444 899
Q ss_pred eeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCCc---cCcceeEeccCCCCCcc-------------cccCC
Q 011045 235 QVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLF---VGSAGLLGLGGGMLSLT-------------KQIKA 298 (495)
Q Consensus 235 ~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~~---~~~~GIlGLg~~~~S~~-------------sQl~~ 298 (495)
.+.|++|+...|.+++|+|+|+ +..++++.|||++...+.+ ...+||||||++.++.. .|+..
T Consensus 72 ~i~Yg~Gs~~~G~~~~D~v~ig-~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~i~~ 150 (323)
T 1bxo_A 72 SISYGDGSSASGNVFTDSVTVG-GVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSSLAQ 150 (323)
T ss_dssp EEECTTSCEEEEEEEEEEEEET-TEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGGBSS
T ss_pred EEEeCCCCeEEEEEEEEEEEEC-CEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHhcCC
Confidence 9999999977799999999999 8999999999999876644 46899999999876653 35668
Q ss_pred CeEEEEecCCCCCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEE
Q 011045 299 TSLAYCLVDRDSPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIV 374 (495)
Q Consensus 299 ~~FS~~L~~~~~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~ii 374 (495)
++||+||.+. ..|.|+||++|+. ++.|+|+..+ .++|.|.|++|+||+ +. .....+||
T Consensus 151 ~~FS~~L~~~---~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~--~~----------~~~~~aii 212 (323)
T 1bxo_A 151 PLFAVALKHQ---QPGVYDFGFIDSSKYTGSLTYTGVDNS---QGFWSFNVDSYTAGS--QS----------GDGFSGIA 212 (323)
T ss_dssp SEEEEECCSS---SCEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEEEEEEETT--EE----------EEEEEEEE
T ss_pred cEEEEEEeCC---CCceEEEeCcChhhccCceEEEECCCC---CCeEEEEEeeEEECC--cc----------CCCceEEE
Confidence 9999999752 3799999999975 8999999754 478999999999999 21 12357999
Q ss_pred ccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCCCCceEEecCCCc
Q 011045 375 DCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGT 454 (495)
Q Consensus 375 DSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~~~y~~~~~~~g~ 454 (495)
||||++++||++++++|.+++.... +....+. +...|+ ..+|+|+|+| ||++++||+++|+++...++.
T Consensus 213 DSGTs~~~lP~~~~~~l~~~i~~a~--~~~~~g~-~~~~C~-------~~~P~i~f~f-gg~~~~l~~~~~~~~~~~~~~ 281 (323)
T 1bxo_A 213 DTGTTLLLLDDSVVSQYYSQVSGAQ--QDSNAGG-YVFDCS-------TNLPDFSVSI-SGYTATVPGSLINYGPSGDGS 281 (323)
T ss_dssp CTTCSSEEECHHHHHHHHTTSTTCE--EETTTTE-EEECTT-------CCCCCEEEEE-TTEEEEECHHHHEEEECSSSS
T ss_pred eCCCCceeCCHHHHHHHHHhCCCce--EcCcCCE-EEEECC-------CCCceEEEEE-CCEEEEECHHHeEEeccCCCC
Confidence 9999999999999999999984321 1112222 122354 3689999999 899999999999987643347
Q ss_pred EEEE-EEecC-CCceeecHHhhcceEEEEeCCCCEEEEeeCC
Q 011045 455 FCFA-FAPTS-SALSIIGNVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 455 ~Cl~-~~~~~-~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
.|++ |.+.+ .+.||||+.|||++|+|||++++|||||++.
T Consensus 282 ~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 282 TCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp CEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred eEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 8984 77653 4689999999999999999999999999874
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=9.8e-53 Score=437.67 Aligned_cols=307 Identities=23% Similarity=0.370 Sum_probs=245.7
Q ss_pred ceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCCCCcCCCCccee
Q 011045 156 SGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQ 235 (495)
Q Consensus 156 ~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~c~y~ 235 (495)
+.+|+++|.||||+|++.|+|||||+++||+|.+|..| ++.|||++|+||+... |.|.
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~----~~~y~~~~SsT~~~~~------------------~~~~ 77 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL----HRYYQRQLSSTYRDLR------------------KGVY 77 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC----SCCCCGGGCTTCEEEE------------------EEEE
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc----cCCcCcccCCCceeCC------------------ceEE
Confidence 46899999999999999999999999999999998655 5789999999999887 8999
Q ss_pred eecCCCceEEEEEEEEEEEECCCcccc-ceEEeEEecCCCCc---cCcceeEeccCCCCCcc------------cccC-C
Q 011045 236 VAYGDGSFTVGDLVTETVSFGNSGSVK-GIALGCGHDNEGLF---VGSAGLLGLGGGMLSLT------------KQIK-A 298 (495)
Q Consensus 236 ~~Ygdgs~~~G~~~~Dtlt~g~~~~v~-~~~fG~~~~~~g~~---~~~~GIlGLg~~~~S~~------------sQl~-~ 298 (495)
+.|++|+. .|.+++|+|+|+++..++ .+.|++..+..+.| ...+||||||++.++.+ +|.. .
T Consensus 78 i~Yg~Gs~-~G~~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~ 156 (395)
T 2qp8_A 78 VPYTQGKW-EGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP 156 (395)
T ss_dssp EECSSCEE-EEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC
T ss_pred EEECCcEE-EEEEEeEEEEECCCCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc
Confidence 99999998 599999999998334443 36788887665555 36799999999877543 2322 4
Q ss_pred CeEEEEecCCC---------CCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccc
Q 011045 299 TSLAYCLVDRD---------SPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMD 365 (495)
Q Consensus 299 ~~FS~~L~~~~---------~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~ 365 (495)
++||+||.+.. ....|.|+||++|+. ++.|+|+... .+|.|.|++|+||++.+.++...+.
T Consensus 157 ~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~g~~~~~~~~~~~-- 230 (395)
T 2qp8_A 157 NLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE----WYYEVIIVRVEINGQDLKMDCKEYN-- 230 (395)
T ss_dssp SCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB----TTBBCCEEEEEETTEECCCCGGGGG--
T ss_pred ceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC----ceEEEEEEEEEECCEEcccCccccC--
Confidence 79999996521 124799999999975 7999999763 7899999999999999876654432
Q ss_pred cCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCC--cccccccccCCCcccccceEEEEEcCCc-----EE
Q 011045 366 EAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGV--ALFDTCYDFSGLRSVRVPTVSLHFGAGK-----AL 438 (495)
Q Consensus 366 ~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~--~~~~~C~~~~~~~~~~~P~ltf~f~gg~-----~~ 438 (495)
...+||||||++++||+++|++|.+++.+.........+. .....|+..+......+|+|+|+|.|+. ++
T Consensus 231 ---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~ 307 (395)
T 2qp8_A 231 ---YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRI 307 (395)
T ss_dssp ---SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEE
T ss_pred ---CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEEEEccCCCCceEEE
Confidence 3579999999999999999999999999875311111111 1235698765444457999999995543 79
Q ss_pred EeCCCCceEEecC---CCcEEE--EEEecCCCceeecHHhhcceEEEEeCCCCEEEEeeCCC
Q 011045 439 DLPAKNYLIPVDS---AGTFCF--AFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC 495 (495)
Q Consensus 439 ~lp~~~y~~~~~~---~g~~Cl--~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 495 (495)
+|++++|+++... ....|+ ++.+. .+.||||+.|||++|+|||++++|||||+++|
T Consensus 308 ~l~p~~yi~~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c 368 (395)
T 2qp8_A 308 TILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSAC 368 (395)
T ss_dssp EECHHHHEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETT
T ss_pred EECHHHhEeecccCCCCCceEEEEEecCC-CCcEEEChHHhCCeeEEEECCCCEEEEEeccC
Confidence 9999999998653 235897 45443 35799999999999999999999999999999
No 31
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.4e-51 Score=429.89 Aligned_cols=308 Identities=23% Similarity=0.367 Sum_probs=244.5
Q ss_pred ceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCCCCcCCCCccee
Q 011045 156 SGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQ 235 (495)
Q Consensus 156 ~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~c~y~ 235 (495)
..+|+++|.||||+|++.|+|||||+++||+|.+| | +.++.|||++|+||+... |.|.
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~--~~~~~y~~~~SsT~~~~~------------------~~~~ 84 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--P--FLHRYYQRQLSSTYRDLR------------------KGVY 84 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--T--TCSCCCCGGGCTTCEEEE------------------EEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--C--cccCCcCcccCcccccCC------------------CEEE
Confidence 36899999999999999999999999999999988 4 357899999999999887 8999
Q ss_pred eecCCCceEEEEEEEEEEEECCCcccc-ceEEeEEecCCCCc---cCcceeEeccCCCCCccc--------ccC-----C
Q 011045 236 VAYGDGSFTVGDLVTETVSFGNSGSVK-GIALGCGHDNEGLF---VGSAGLLGLGGGMLSLTK--------QIK-----A 298 (495)
Q Consensus 236 ~~Ygdgs~~~G~~~~Dtlt~g~~~~v~-~~~fG~~~~~~g~~---~~~~GIlGLg~~~~S~~s--------Ql~-----~ 298 (495)
+.|++|+. .|.+++|+|+|+++..+. .+.|+|.....+.+ ...+||||||++.++... ||. .
T Consensus 85 i~Yg~Gs~-~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~ 163 (402)
T 3vf3_A 85 VPYTQGKW-EGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP 163 (402)
T ss_dssp EECSSCEE-EEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC
T ss_pred EEECcEEE-EEEEEEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc
Confidence 99999997 599999999998434444 34588887766554 467999999998776532 221 4
Q ss_pred CeEEEEecCC----C-----CCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccc
Q 011045 299 TSLAYCLVDR----D-----SPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMD 365 (495)
Q Consensus 299 ~~FS~~L~~~----~-----~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~ 365 (495)
++||+||.+. + ....|.|+||++|+. ++.|+|+.. ..+|.|.+++|+||++.+.++...+
T Consensus 164 ~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~g~~~~~~~~~~--- 236 (402)
T 3vf3_A 164 NLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDCKEY--- 236 (402)
T ss_dssp SCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSS----BTTBEECEEEEEETTEECCCCGGGG---
T ss_pred cceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCc----CcEEEEEEeEEEECCEEeccccccc---
Confidence 7999999642 1 234799999999976 799999976 3789999999999999987655433
Q ss_pred cCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCC--cccccccccCCCcccccceEEEEEcCCc-----EE
Q 011045 366 EAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGV--ALFDTCYDFSGLRSVRVPTVSLHFGAGK-----AL 438 (495)
Q Consensus 366 ~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~--~~~~~C~~~~~~~~~~~P~ltf~f~gg~-----~~ 438 (495)
+...+||||||++++||.++|++|.+++++.....+...+. .+...|+.........+|+|+|+|.|+. .+
T Consensus 237 --~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~ 314 (402)
T 3vf3_A 237 --NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRI 314 (402)
T ss_dssp --GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEE
T ss_pred --CCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEecCCCCceEEE
Confidence 24579999999999999999999999999875311111221 1256798765444457999999995433 59
Q ss_pred EeCCCCceEEecCC---CcEEEEEEe-cCCCceeecHHhhcceEEEEeCCCCEEEEeeCCC
Q 011045 439 DLPAKNYLIPVDSA---GTFCFAFAP-TSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC 495 (495)
Q Consensus 439 ~lp~~~y~~~~~~~---g~~Cl~~~~-~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 495 (495)
+|++++|+++.... ...|++|.. ...+.||||+.|||++|+|||++++|||||+++|
T Consensus 315 ~l~~~~yi~~~~~~~~~~~~C~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c 375 (402)
T 3vf3_A 315 TILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSAC 375 (402)
T ss_dssp EECHHHHEEECCCGGGTTEEEEEECEEEESSCEEECHHHHTTEEEEEEGGGTEEEEEEETT
T ss_pred EECHHHheehhccCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEeccc
Confidence 99999999986532 148986432 2346799999999999999999999999999999
No 32
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.2e-51 Score=437.04 Aligned_cols=307 Identities=22% Similarity=0.364 Sum_probs=247.8
Q ss_pred ceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCCCCcCCCCccee
Q 011045 156 SGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQ 235 (495)
Q Consensus 156 ~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~~~C~~~~c~y~ 235 (495)
+.+|+++|.||||+|++.|+|||||+++||+|.+| | +.++.|||++|+||+..+ |.|.
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c--~~~~~y~~~~SsT~~~~~------------------~~~~ 130 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--P--FLHRYYQRQLSSTYRDLR------------------KGVY 130 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--T--TCSCCCCGGGCTTCEEEE------------------EEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--c--ccCCcccCCCCCCcccCC------------------ccEE
Confidence 45899999999999999999999999999999988 4 357899999999999887 8999
Q ss_pred eecCCCceEEEEEEEEEEEECCCcccc-ceEEeEEecCCCCc---cCcceeEeccCCCCCccc--------ccC-----C
Q 011045 236 VAYGDGSFTVGDLVTETVSFGNSGSVK-GIALGCGHDNEGLF---VGSAGLLGLGGGMLSLTK--------QIK-----A 298 (495)
Q Consensus 236 ~~Ygdgs~~~G~~~~Dtlt~g~~~~v~-~~~fG~~~~~~g~~---~~~~GIlGLg~~~~S~~s--------Ql~-----~ 298 (495)
+.|++|+. .|.+++|+|+|+++..+. ++.|+|+.+..+.| ...+||||||++.++... +|. .
T Consensus 131 i~Yg~Gs~-~G~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~ 209 (455)
T 3lpj_A 131 VPYTQGKW-EGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP 209 (455)
T ss_dssp EECSSCEE-EEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC
T ss_pred EEeCCeEE-EEEEEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC
Confidence 99999998 599999999998433333 36789988776655 467999999998776532 221 4
Q ss_pred CeEEEEecCCC---------CCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccc
Q 011045 299 TSLAYCLVDRD---------SPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMD 365 (495)
Q Consensus 299 ~~FS~~L~~~~---------~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~ 365 (495)
++||+||.+.. ....|.|+||++|+. ++.|+|+.. ..+|.|.+++|+||++.+.++...+
T Consensus 210 ~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~g~~~~~~~~~~--- 282 (455)
T 3lpj_A 210 NLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDCKEY--- 282 (455)
T ss_dssp SCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCEEEEEETTEECCCCGGGG---
T ss_pred ceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCC----CceeEEEEeEEEECCEEcccccccc---
Confidence 79999997531 234799999999976 799999986 3799999999999999987665433
Q ss_pred cCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCC---CcccccccccCCCcccccceEEEEEcCCc-----E
Q 011045 366 EAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSG---VALFDTCYDFSGLRSVRVPTVSLHFGAGK-----A 437 (495)
Q Consensus 366 ~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~P~ltf~f~gg~-----~ 437 (495)
+...+||||||++++||+++|++|.+++++... .....+ ..+...|+.........+|+|+|+|.|+. +
T Consensus 283 --~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~-~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~ 359 (455)
T 3lpj_A 283 --NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS-TEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFR 359 (455)
T ss_dssp --GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTT-TSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEE
T ss_pred --CCCeEEEECCCcceeCCHHHHHHHHHHhhhhcc-ccccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceEE
Confidence 245799999999999999999999999998753 111111 11256798865544456999999995443 5
Q ss_pred EEeCCCCceEEecCCC---cEEEEEEec-CCCceeecHHhhcceEEEEeCCCCEEEEeeCCC
Q 011045 438 LDLPAKNYLIPVDSAG---TFCFAFAPT-SSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC 495 (495)
Q Consensus 438 ~~lp~~~y~~~~~~~g---~~Cl~~~~~-~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 495 (495)
|+|++++|+++....+ ..|++|... ..+.||||+.|||++|+|||++++|||||+++|
T Consensus 360 ~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c 421 (455)
T 3lpj_A 360 ITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSAC 421 (455)
T ss_dssp EEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETT
T ss_pred EEECHHHheEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEeccc
Confidence 9999999999876432 589975322 346799999999999999999999999999999
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=3.3e-51 Score=417.83 Aligned_cols=292 Identities=22% Similarity=0.401 Sum_probs=237.1
Q ss_pred eeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCCCccCCCCCccCCCCCCcccCCCCCCccccCCCC
Q 011045 145 STPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDV 224 (495)
Q Consensus 145 ~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~ 224 (495)
++|+.+. +.+|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++. .
T Consensus 4 ~~~l~n~----~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~----------~~y~~s~Ss~~~--~----------- 56 (340)
T 1wkr_A 4 SVPATNQ----LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD----------KSYVKTSTSSAT--S----------- 56 (340)
T ss_dssp EEEEEEC----SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS----------SCCCCCTTCEEE--E-----------
T ss_pred cEeeecc----CcEEEEEEEECCCCcEEEEEEeCCChhheecCC----------CccCCcCCcccc--C-----------
Confidence 4677764 468999999999999999999999999999874 479998887653 2
Q ss_pred CCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCCccCcceeEeccCCCCCcc-----------
Q 011045 225 SACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGLFVGSAGLLGLGGGMLSLT----------- 293 (495)
Q Consensus 225 ~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~~~~~~GIlGLg~~~~S~~----------- 293 (495)
|.|.+.|++|+. .|.+++|+|+|+ +..++++.|||++...+ |...+||||||++.+++.
T Consensus 57 -------~~~~i~Yg~Gs~-~G~~~~Dtv~~g-~~~v~~~~fg~~~~~~~-~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 126 (340)
T 1wkr_A 57 -------DKVSVTYGSGSF-SGTEYTDTVTLG-SLTIPKQSIGVASRDSG-FDGVDGILGVGPVDLTVGTLSPHTSTSIP 126 (340)
T ss_dssp -------EEEEEECSSCEE-EEEEEEEEEEET-TEEEEEEEEEEEEEEES-CTTCSEEEECSCGGGGTTSEESCTTCCCC
T ss_pred -------ceEEEEECCcEE-EEEEEEEEEEEC-CEEEcceEEEEEEccCC-CcCCCcEEECCccccccccccccccccCC
Confidence 889999999985 599999999999 89999999999998766 557899999999887652
Q ss_pred ---cc------cCCCeEEEEecCCCC--CCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecC-eeeec
Q 011045 294 ---KQ------IKATSLAYCLVDRDS--PASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGG-QAVQI 357 (495)
Q Consensus 294 ---sQ------l~~~~FS~~L~~~~~--~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg-~~~~i 357 (495)
.+ +..++||+||.+..+ ...|.|+||++|+. ++.|+|++.++....+|.|. .+|+|++ +.+..
T Consensus 127 ~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~~ 205 (340)
T 1wkr_A 127 TVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSILS 205 (340)
T ss_dssp CHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEEE
T ss_pred CHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEccC
Confidence 11 347899999976422 23799999999964 89999998865446899999 9999998 77641
Q ss_pred CCCccccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcE
Q 011045 358 PPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKA 437 (495)
Q Consensus 358 ~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~ 437 (495)
.+.+||||||++++||+++|++|.+++++... ...+ +|.++|.....+|+|+|+| +|+.
T Consensus 206 -----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~---~~~g------~~~~~C~~~~~~p~i~f~f-~g~~ 264 (340)
T 1wkr_A 206 -----------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD---NNTG------LLRLTTAQYANLQSLFFTI-GGQT 264 (340)
T ss_dssp -----------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC---TTTS------SEEECHHHHHTCCCEEEEE-TTEE
T ss_pred -----------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc---CCCC------eEEeeccccccCCcEEEEE-CCEE
Confidence 24689999999999999999999998875432 1122 2334444446789999999 8999
Q ss_pred EEeCCCCceEEecC------CCcEEE-EEEecC-----CCceeecHHhhcceEEEEeCCCCEEEEeeCCC
Q 011045 438 LDLPAKNYLIPVDS------AGTFCF-AFAPTS-----SALSIIGNVQQQGTRVSFDLANNRVGFTPNKC 495 (495)
Q Consensus 438 ~~lp~~~y~~~~~~------~g~~Cl-~~~~~~-----~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C 495 (495)
++|++++|+++... ....|+ +|.+.. +..||||+.|||++|+|||++++|||||+++|
T Consensus 265 ~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~ 334 (340)
T 1wkr_A 265 FELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSF 334 (340)
T ss_dssp EEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTT
T ss_pred EEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCC
Confidence 99999999986531 124575 676531 24699999999999999999999999999987
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=8e-41 Score=324.67 Aligned_cols=216 Identities=23% Similarity=0.427 Sum_probs=184.5
Q ss_pred eeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCC---CccCCCCCccCCCCCCcccCCCCCCccccC
Q 011045 145 STPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCT---ECYQQSDPIFDPKTSSSYSPLPCAAPQCKS 221 (495)
Q Consensus 145 ~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~---~C~~~~~~~f~p~~SsT~~~~~C~~~~C~~ 221 (495)
.+|+.+. .+++|+++|.||||+|++.|+|||||+++||+|.+|. .|. .++.|||++|+||+...
T Consensus 4 ~~~l~n~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~-------- 70 (239)
T 1b5f_A 4 VVALTND---RDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACR--AHSMYESSDSSTYKENG-------- 70 (239)
T ss_dssp EEEEEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHH--TSCCBCGGGCTTCEEEE--------
T ss_pred eeeeeec---CCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccC--CCCCCCCccCCCeeeCC--------
Confidence 4666653 4689999999999999999999999999999999997 576 46899999999999876
Q ss_pred CCCCCcCCCCcceeeecCCCceEEEEEEEEEEEECCCccccceEEeEEecCCCC-c--cCcceeEeccCCCCCc------
Q 011045 222 LDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFGNSGSVKGIALGCGHDNEGL-F--VGSAGLLGLGGGMLSL------ 292 (495)
Q Consensus 222 ~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g~~~~v~~~~fG~~~~~~g~-~--~~~~GIlGLg~~~~S~------ 292 (495)
|.|.+.|++|+. .|.+++|+|+|+ +..++++.|||++...+. | ..++||||||++.++.
T Consensus 71 ----------~~~~i~Yg~Gs~-~G~~~~D~v~~g-~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l 138 (239)
T 1b5f_A 71 ----------TFGAIIYGTGSI-TGFFSQDSVTIG-DLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNM 138 (239)
T ss_dssp ----------EEEEEECSSCEE-EEEEEEEEEEET-TEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHH
T ss_pred ----------cEEEEEECCCcE-EEEEEEEEEEEC-CcEEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHH
Confidence 789999999985 599999999999 899999999999987642 2 4689999999999873
Q ss_pred ccc--cCCCeEEEEecCCC-CCCcceEEeccCCCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccc
Q 011045 293 TKQ--IKATSLAYCLVDRD-SPASGVLEFNSARGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMD 365 (495)
Q Consensus 293 ~sQ--l~~~~FS~~L~~~~-~~~~g~L~fGg~d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~ 365 (495)
.+| +..++||+||.+.. ....|.|+||++|+. ++.|+|+... .+|.|.|++|+|+++.+.+..
T Consensus 139 ~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~----~~~~v~l~~i~v~~~~~~~~~------ 208 (239)
T 1b5f_A 139 LNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ----YYWQFGIGDVLIGDKSTGFCA------ 208 (239)
T ss_dssp HHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE----TTEEEEECCEEETTEECCTTT------
T ss_pred HHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC----CeEEEEeeEEEECCEEecccC------
Confidence 334 45799999997643 234799999999975 7999999864 699999999999999876432
Q ss_pred cCCCCcEEEccCccceeecHHHHHHHHHHHHH
Q 011045 366 EAGDGGIIVDCGTAITRLQTQAYNSLRDSFVR 397 (495)
Q Consensus 366 ~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~ 397 (495)
....+||||||++++||+++|++|.+++++
T Consensus 209 --~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 209 --PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp --TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred --CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 246799999999999999999999999864
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=3.1e-35 Score=285.44 Aligned_cols=213 Identities=23% Similarity=0.364 Sum_probs=172.0
Q ss_pred CccccceEEeEEecCCCC-c--cCcceeEeccCCCCCcc----------cc--cCCCeEEEEecCCCCC-CcceEEeccC
Q 011045 258 SGSVKGIALGCGHDNEGL-F--VGSAGLLGLGGGMLSLT----------KQ--IKATSLAYCLVDRDSP-ASGVLEFNSA 321 (495)
Q Consensus 258 ~~~v~~~~fG~~~~~~g~-~--~~~~GIlGLg~~~~S~~----------sQ--l~~~~FS~~L~~~~~~-~~g~L~fGg~ 321 (495)
+.+++++.|||++...+. | ...+||||||++.++.. +| +..++||+||.+..+. ..|.|+||++
T Consensus 2 g~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 81 (241)
T 1lya_B 2 GVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGT 81 (241)
T ss_dssp CEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSC
T ss_pred CeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCc
Confidence 567899999999998764 3 46899999999887643 22 4589999999775322 2799999999
Q ss_pred CCC----CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecHHHHHHHHHHHHH
Q 011045 322 RGG----DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVR 397 (495)
Q Consensus 322 d~~----~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~ 397 (495)
|++ ++.|+|+.. ..+|.|.+++|+|+++.+.. .....+||||||++++||+++|++|.+++++
T Consensus 82 d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~---------~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~ 148 (241)
T 1lya_B 82 DSKYYKGSLSYLNVTR----KAYWQVHLDQVEVASGLTLC---------KEGCEAIVDTGTSLMVGPVDEVRELQKAIGA 148 (241)
T ss_dssp CGGGEEEEEEEEECSS----BTTBEEEEEEEEETTSCEES---------TTCEEEEECTTCSSEEECHHHHHHHHHHHTC
T ss_pred CHHHcCCceEEEECcc----ccEEEEEEeEEEECCeeEec---------cCCCEEEEECCCccccCCHHHHHHHHHHhCC
Confidence 975 799999975 37999999999999987531 2345799999999999999999999999965
Q ss_pred hhcCCCCCCCCcccccccccCCCcccccceEEEEEcCCcEEEeCCCCceEEecCC-CcEEE-EEEec-----CCCceeec
Q 011045 398 LAGNLKPTSGVALFDTCYDFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSA-GTFCF-AFAPT-----SSALSIIG 470 (495)
Q Consensus 398 ~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ltf~f~gg~~~~lp~~~y~~~~~~~-g~~Cl-~~~~~-----~~~~~IlG 470 (495)
... ..+. +...|+. ...+|+|+|+| +|++++||+++|+++.... +..|+ +|.+. ..+.||||
T Consensus 149 ~~~----~~g~-~~~~C~~-----~~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG 217 (241)
T 1lya_B 149 VPL----IQGE-YMIPCEK-----VSTLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILG 217 (241)
T ss_dssp EEE----ETTE-EEEEGGG-----GGGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEEC
T ss_pred eec----cCCc-EEEECCC-----CccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEec
Confidence 421 1222 2234653 45799999999 8999999999999987632 46898 68765 24689999
Q ss_pred HHhhcceEEEEeCCCCEEEEeeCC
Q 011045 471 NVQQQGTRVSFDLANNRVGFTPNK 494 (495)
Q Consensus 471 ~~fl~~~yvvfD~~~~rIGFa~~~ 494 (495)
+.|||++|+|||++++|||||+++
T Consensus 218 ~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 218 DVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp HHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hHHhcceEEEEECCCCEEEEEEcC
Confidence 999999999999999999999875
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.86 E-value=8.4e-22 Score=163.67 Aligned_cols=88 Identities=32% Similarity=0.640 Sum_probs=79.0
Q ss_pred eeccccCCCCCceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCCCCC----CccCCCCCccCCCCCCcccCCCCCCcccc
Q 011045 145 STPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCT----ECYQQSDPIFDPKTSSSYSPLPCAAPQCK 220 (495)
Q Consensus 145 ~~p~~~~~~~~~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~C~----~C~~~~~~~f~p~~SsT~~~~~C~~~~C~ 220 (495)
..||.+. .+++|+++|.||||+|++.|+|||||+++||+|.+|. .|. .++.|||++|+||+...
T Consensus 4 ~~~l~n~---~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~--~~~~y~p~~SsT~~~~~------- 71 (97)
T 1lya_A 4 PEVLKNY---MDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACW--IHHKYNSDKSSTYVKNG------- 71 (97)
T ss_dssp EEEEEEE---TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHH--TSCCBCGGGCTTCEEEE-------
T ss_pred eEeeEEC---CCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccC--CCCCCCchhCCCceeCC-------
Confidence 4566653 4689999999999999999999999999999999997 676 47899999999999877
Q ss_pred CCCCCCcCCCCcceeeecCCCceEEEEEEEEEEEEC
Q 011045 221 SLDVSACRANRCLYQVAYGDGSFTVGDLVTETVSFG 256 (495)
Q Consensus 221 ~~~~~~C~~~~c~y~~~Ygdgs~~~G~~~~Dtlt~g 256 (495)
|.|.+.|++|+. .|.+++|+|+|+
T Consensus 72 -----------~~~~i~Yg~Gs~-~G~~~~Dtv~i~ 95 (97)
T 1lya_A 72 -----------TSFDIHYGSGSL-SGYLSQDTVSVP 95 (97)
T ss_dssp -----------EEEEEECSSCEE-EEEEEEEEEEES
T ss_pred -----------CcEEEEECCcEE-EEEEEEEEEEEC
Confidence 899999999995 599999999998
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.66 E-value=1.3e-16 Score=129.74 Aligned_cols=78 Identities=27% Similarity=0.456 Sum_probs=65.5
Q ss_pred ccCCCcccccceEEEEEcCCcEEEeCCCCceEEecCC-CcEEE-EEEec----CCCceeecHHhhcceEEEEeCCCCEEE
Q 011045 416 DFSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSA-GTFCF-AFAPT----SSALSIIGNVQQQGTRVSFDLANNRVG 489 (495)
Q Consensus 416 ~~~~~~~~~~P~ltf~f~gg~~~~lp~~~y~~~~~~~-g~~Cl-~~~~~----~~~~~IlG~~fl~~~yvvfD~~~~rIG 489 (495)
.++|.....+|+|+|+| ||++++|++++|+++.... +..|+ +|.+. .++.||||+.|||++|+|||++++|||
T Consensus 4 ~v~C~~~~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riG 82 (87)
T 1b5f_B 4 QVDCNTLSSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVG 82 (87)
T ss_dssp EECGGGGGGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEE
T ss_pred EEECCCCCcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEE
Confidence 34555556799999999 8999999999999987532 36898 68764 245799999999999999999999999
Q ss_pred EeeCC
Q 011045 490 FTPNK 494 (495)
Q Consensus 490 Fa~~~ 494 (495)
||+++
T Consensus 83 fA~~~ 87 (87)
T 1b5f_B 83 FAEAA 87 (87)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 99874
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.85 E-value=0.29 Score=42.44 Aligned_cols=108 Identities=16% Similarity=0.210 Sum_probs=60.5
Q ss_pred eeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhc-CCC-CCCCCcccccccc
Q 011045 339 TFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAG-NLK-PTSGVALFDTCYD 416 (495)
Q Consensus 339 ~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~-~~~-~~~~~~~~~~C~~ 416 (495)
+.++|. +.|+|+.+. ++||||.+.+.++.+..+.+--. .... ... ...+.... .+
T Consensus 25 ~~~~v~---v~InG~~~~---------------~LvDTGAs~s~is~~~a~~lgl~--~~~~~~~~~~a~g~g~~-~~-- 81 (148)
T 2i1a_A 25 PMLYIN---IEINNYPVK---------------AFVDTGAQTTIMSTRLAKKTGLS--RMIDKRFIGEARGVGTG-KI-- 81 (148)
T ss_dssp CCCEEE---EEETTEEEE---------------EEECTTCSSCEEEHHHHHHHTGG--GGCBCCCC--------------
T ss_pred ceEEEE---EEECCEEEE---------------EEEECCCCccccCHHHHHHcCCC--ccCCcceEEEEecCCCc-cc--
Confidence 445555 678888665 79999999999998877654210 0000 000 00111000 00
Q ss_pred cCCCcccccceEEEEEcCCcEEEeCCCCceEEecCCCcEEEEEEecCCCceeecHHhhcceEEEEeCCCCEEEEe
Q 011045 417 FSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFT 491 (495)
Q Consensus 417 ~~~~~~~~~P~ltf~f~gg~~~~lp~~~y~~~~~~~g~~Cl~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa 491 (495)
........+.+ |+..+.++ + .+.. .+...|||..||+.+-+..|+.+++|-|.
T Consensus 82 -----~~~~~~~~i~i-g~~~~~~~---~------------~vl~-~~~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 82 -----IGRIHQAQVKI-ETQYIPCS---F------------TVLD-TDIDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp -----CEEEEEEEEEE-TTEEEEEE---E------------EEEC-SSCSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred -----ccEEEEEEEEE-CCEEecee---E------------EEec-CCCCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 01122235566 55442211 1 1112 12358999999999999999999999885
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=92.20 E-value=0.21 Score=43.76 Aligned_cols=109 Identities=20% Similarity=0.320 Sum_probs=62.9
Q ss_pred eeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecHHHHHHHHHHHHHhhcC-CC-CCCCCcccccccc
Q 011045 339 TFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGN-LK-PTSGVALFDTCYD 416 (495)
Q Consensus 339 ~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~~~l~~~l~~~~~~-~~-~~~~~~~~~~C~~ 416 (495)
..++|+ +.|+|+.+. ++||||.+.+.++.+..+.+- +...... +. ...+... ..+
T Consensus 23 ~~l~v~---~~Ing~~v~---------------~LVDTGAs~s~Is~~~A~rlG--L~~~~~~~~~~~a~g~G~-~~~-- 79 (148)
T 3s8i_A 23 TMLYIN---CKVNGHPLK---------------AFVDSGAQMTIMSQACAERCN--IMRLVDRRWAGVAKGVGT-QRI-- 79 (148)
T ss_dssp CCCEEE---EEETTEEEE---------------EEECTTCSSCEEEHHHHHHTT--CGGGEEGGGCEECCC----CEE--
T ss_pred CEEEEE---EEECCEEEE---------------EEEeCCCCcEeeCHHHHHHcC--CccccCcceeEEEEcCCc-cEE--
Confidence 345555 457888765 799999999999998887761 1000000 00 0011000 000
Q ss_pred cCCCcccccceEEEEEcCCcEEEeCCCCceEEecCCCcEEE-EEEecCCCceeecHHhhcceEEEEeCCCCEEEEee
Q 011045 417 FSGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCF-AFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTP 492 (495)
Q Consensus 417 ~~~~~~~~~P~ltf~f~gg~~~~lp~~~y~~~~~~~g~~Cl-~~~~~~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~ 492 (495)
....+...+.+ |+..+. |- .+.....-..|||..||+.+-.+.|++++++-|..
T Consensus 80 -----~g~v~~~~I~I-g~~~~~----------------~~~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 80 -----IGRVHLAQIQI-EGDFLQ----------------CSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp -----EEEEEEEEEEE-TTEEEE----------------EEEEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTT
T ss_pred -----EEEEEEEEEEE-CCEEEE----------------EEEEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 11233345555 443321 22 22222233589999999999999999999998754
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.17 E-value=0.19 Score=43.56 Aligned_cols=30 Identities=13% Similarity=0.231 Sum_probs=26.9
Q ss_pred ceeEEEEEEeCCCCcEEEEEEecCCCCeeEeC
Q 011045 156 SGEYFSRIGVGTPPRQFSMVLDTGSDINWLQC 187 (495)
Q Consensus 156 ~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c 187 (495)
.+.|++++.|+ ++++.+++|||++.+-+.-
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 57899999999 8999999999999998853
No 41
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=80.20 E-value=1.7 Score=35.46 Aligned_cols=26 Identities=23% Similarity=0.341 Sum_probs=23.8
Q ss_pred EEEEEEeCCCCcEEEEEEecCCCCeeEe
Q 011045 159 YFSRIGVGTPPRQFSMVLDTGSDINWLQ 186 (495)
Q Consensus 159 Y~~~i~IGTP~q~~~livDTGS~~~WV~ 186 (495)
-++.|.|| +|.+.+++|||.+++-+.
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 46789999 899999999999999997
No 42
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=79.89 E-value=2.1 Score=34.62 Aligned_cols=28 Identities=25% Similarity=0.298 Sum_probs=24.5
Q ss_pred EEEEEEeCCCCcEEEEEEecCCCCeeEeCC
Q 011045 159 YFSRIGVGTPPRQFSMVLDTGSDINWLQCR 188 (495)
Q Consensus 159 Y~~~i~IGTP~q~~~livDTGS~~~WV~c~ 188 (495)
-++.|.|| .|.+.+++|||.|++-+.-.
T Consensus 9 P~vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 9 PLVTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 46789999 89999999999999999644
No 43
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=75.25 E-value=3.5 Score=33.29 Aligned_cols=28 Identities=18% Similarity=0.154 Sum_probs=24.3
Q ss_pred EEEEEEeCCCCcEEEEEEecCCCCeeEeCC
Q 011045 159 YFSRIGVGTPPRQFSMVLDTGSDINWLQCR 188 (495)
Q Consensus 159 Y~~~i~IGTP~q~~~livDTGS~~~WV~c~ 188 (495)
-++.|.|| +|.+.+++|||.|++-+.-.
T Consensus 9 P~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 9 PVVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 36789999 99999999999999999543
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=70.92 E-value=3.8 Score=33.82 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=26.1
Q ss_pred EEEEEEeC---CCCcEEEEEEecCCCCeeEeCCCC
Q 011045 159 YFSRIGVG---TPPRQFSMVLDTGSDINWLQCRPC 190 (495)
Q Consensus 159 Y~~~i~IG---TP~q~~~livDTGS~~~WV~c~~C 190 (495)
=.+.|.|| +|+|.+..++|||-|++-+.-..+
T Consensus 11 PlvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 11 PVIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp CEEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred CeEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 35666666 889999999999999999986544
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=69.09 E-value=4.4 Score=33.68 Aligned_cols=27 Identities=37% Similarity=0.401 Sum_probs=23.2
Q ss_pred EEEEEEeCCCCcEEEEEEecCCCCeeEeCC
Q 011045 159 YFSRIGVGTPPRQFSMVLDTGSDINWLQCR 188 (495)
Q Consensus 159 Y~~~i~IGTP~q~~~livDTGS~~~WV~c~ 188 (495)
=++ |.|| +|.+.+++|||.|++-+.-.
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 445 9999 89999999999999999643
No 46
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=64.01 E-value=6.3 Score=34.12 Aligned_cols=31 Identities=10% Similarity=0.208 Sum_probs=27.3
Q ss_pred ceeEEEEEEeCCCCcEEEEEEecCCCCeeEeCC
Q 011045 156 SGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCR 188 (495)
Q Consensus 156 ~g~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~ 188 (495)
...|++++.|+ .+++.+++|||++.+.+.-.
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 45799999998 89999999999999999654
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=62.36 E-value=7.9 Score=31.99 Aligned_cols=29 Identities=14% Similarity=0.283 Sum_probs=25.2
Q ss_pred EEEEEEeCCCCcEEEEEEecCCCCeeEeCCC
Q 011045 159 YFSRIGVGTPPRQFSMVLDTGSDINWLQCRP 189 (495)
Q Consensus 159 Y~~~i~IGTP~q~~~livDTGS~~~WV~c~~ 189 (495)
-.+.+.|| +|.+.+++|||-|++-+.-..
T Consensus 10 P~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 10 PSLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred CeEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 36789999 899999999999999997654
No 48
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=57.04 E-value=12 Score=29.68 Aligned_cols=41 Identities=24% Similarity=0.488 Sum_probs=26.1
Q ss_pred eeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecHH
Q 011045 328 TAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQ 386 (495)
Q Consensus 328 ~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 386 (495)
..||... ....|+++ |.||. |+..+ .++||||++.+|+|..
T Consensus 4 ~~~l~n~--~~~~Y~~~---i~iGT-----P~Q~~--------~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 4 PEVLKNY--MDAQYYGE---IGIGT-----PPQCF--------TVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEEEE--TTTEEEEE---EEETT-----TTEEE--------EEEEETTCCCEEEEBT
T ss_pred eEeeEEC--CCCeEEEE---EEECC-----CCeEE--------EEEEeCCCCceEEeEc
Confidence 3566432 13567765 77873 22222 2799999999999965
No 49
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=48.52 E-value=20 Score=30.35 Aligned_cols=29 Identities=24% Similarity=0.315 Sum_probs=25.0
Q ss_pred eEEEEEEeCCCCcEEEEEEecCCCCeeEeCC
Q 011045 158 EYFSRIGVGTPPRQFSMVLDTGSDINWLQCR 188 (495)
Q Consensus 158 ~Y~~~i~IGTP~q~~~livDTGS~~~WV~c~ 188 (495)
.-++.+.|+ +|.+.+++|||.+.+-+.-.
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 457789999 89999999999999999643
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=46.71 E-value=20 Score=30.05 Aligned_cols=23 Identities=22% Similarity=0.332 Sum_probs=19.7
Q ss_pred eCCCCcEEEEEEecCCCCeeEeCCC
Q 011045 165 VGTPPRQFSMVLDTGSDINWLQCRP 189 (495)
Q Consensus 165 IGTP~q~~~livDTGS~~~WV~c~~ 189 (495)
|| +|.+.+++|||-|++-+.-..
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 66 788899999999999997553
No 51
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=44.84 E-value=18 Score=32.95 Aligned_cols=27 Identities=26% Similarity=0.321 Sum_probs=24.2
Q ss_pred EEEEEEeCCCCcEEEEEEecCCCCeeEeC
Q 011045 159 YFSRIGVGTPPRQFSMVLDTGSDINWLQC 187 (495)
Q Consensus 159 Y~~~i~IGTP~q~~~livDTGS~~~WV~c 187 (495)
-.+.|.|| +|.+.+++|||.|++-+.-
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEec
Confidence 57889999 8999999999999999953
No 52
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=33.54 E-value=40 Score=32.54 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=24.5
Q ss_pred CeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecHHHH
Q 011045 338 DTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAY 388 (495)
Q Consensus 338 ~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~ 388 (495)
...|+++ |+||.+.+. ++||||++.+|+|..-.
T Consensus 14 ~~~Y~~~---i~iG~Q~~~---------------v~~DTGSs~lWv~~~~C 46 (323)
T 1bxo_A 14 DEEYITP---VTIGGTTLN---------------LNFDTGSADLWVFSTEL 46 (323)
T ss_dssp GSCEEEE---EEETTEEEE---------------EEEETTCCCEEECBTTS
T ss_pred CCEEEEE---EEECCEEEE---------------EEEeCCCcceEEecCCC
Confidence 3567665 778855544 79999999999997543
No 53
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=32.78 E-value=42 Score=32.38 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=24.4
Q ss_pred CeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecHHHH
Q 011045 338 DTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAY 388 (495)
Q Consensus 338 ~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~ 388 (495)
...|+++ |+||.+.+. ++||||++.+|+|..-.
T Consensus 14 ~~~Y~~~---i~iG~q~~~---------------v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 14 DEEYITQ---VTVGDDTLG---------------LDFDTGSADLWVFSSQT 46 (323)
T ss_dssp GCCEEEE---EEETTEEEE---------------EEEETTCCCEEECBTTS
T ss_pred CCEEEEE---EEECCEEEE---------------EEEcCCCcceEEecCCC
Confidence 3567665 778855543 79999999999997543
No 54
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=31.84 E-value=43 Score=32.30 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=24.7
Q ss_pred CeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecHHHH
Q 011045 338 DTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAY 388 (495)
Q Consensus 338 ~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~ 388 (495)
...|+++ |+||.+.+. ++||||++.+|+|..-.
T Consensus 13 ~~~Y~~~---i~iG~Q~~~---------------v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 13 DEEYLTP---VTVGKSTLH---------------LDFDTGSADLWVFSDEL 45 (325)
T ss_dssp TSCEEEE---EEEBTEEEE---------------EEEETTCCCEEEECTTS
T ss_pred CCEEEEE---EEECCEEEE---------------EEEeCCCccceEeeCCC
Confidence 4667765 678855544 79999999999997543
No 55
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=29.70 E-value=56 Score=31.57 Aligned_cols=40 Identities=18% Similarity=0.278 Sum_probs=25.9
Q ss_pred eeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecHH
Q 011045 328 TAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQ 386 (495)
Q Consensus 328 ~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 386 (495)
.+|+... ...|+++ |.||. |+..+ .++||||++.+|+|..
T Consensus 4 ~~~l~~~---~~~Y~~~---i~iGt-----P~q~~--------~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 4 PTTLINE---GPSYAAD---IVVGS-----NQQKQ--------TVVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEEEC---SSSEEEE---EEETT-----TTEEE--------EEEEETTCCCEEEEEE
T ss_pred eEEEecC---CcEEEEE---EEEcC-----CCcEE--------EEEEcCCCCCEEEecC
Confidence 3455543 3567765 77773 22222 2799999999999843
No 56
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=29.57 E-value=54 Score=32.70 Aligned_cols=42 Identities=10% Similarity=0.155 Sum_probs=27.3
Q ss_pred eeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecHH
Q 011045 328 TAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQ 386 (495)
Q Consensus 328 ~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 386 (495)
..||..+. ....|+++ |.||. |+..+ .++||||++.+|+|..
T Consensus 11 ~~pl~~~~-~~~~Y~~~---i~iGT-----P~Q~~--------~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 11 VLPVQNDG-STGLHWAN---LQKRT-----PLMQV--------PVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEECT-TTCCEEEE---EEETT-----TTEEE--------EEEEETTCSSEEEECS
T ss_pred EEeeecCC-CCceEEEE---EECCC-----CCcee--------EEEEECCCCceeECCC
Confidence 46776432 24567765 66773 22222 2799999999999854
No 57
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=29.31 E-value=63 Score=31.27 Aligned_cols=38 Identities=24% Similarity=0.392 Sum_probs=25.8
Q ss_pred eeeeecCCCCCeeEEEEeeeeEec--CeeeecCCCccccccCCCCcEEEccCccceeecHH
Q 011045 328 TAPLIRNKKVDTFYYVGLTGFSVG--GQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQ 386 (495)
Q Consensus 328 ~tpl~~~~~~~~~y~V~l~gIsVg--g~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 386 (495)
-+|+... ...|+++ |.|| .+.+. ++||||++.+|+|..
T Consensus 4 ~~~l~~~---~~~Y~~~---i~iGtP~q~~~---------------v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 4 AVTLHNE---AITYTAD---ITVGSDNQKLN---------------VIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEEEEC---SSCEEEE---EEETTTTEEEE---------------EEEETTCCCEEEEEE
T ss_pred eEEEecC---CeEEEEE---EEECCCCcEEE---------------EEEeCCCCCeEEecC
Confidence 3455543 4567765 6787 33333 799999999999843
No 58
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=29.14 E-value=58 Score=31.44 Aligned_cols=38 Identities=26% Similarity=0.361 Sum_probs=26.2
Q ss_pred eeeeecCCCCCeeEEEEeeeeEecC--eeeecCCCccccccCCCCcEEEccCccceeecHH
Q 011045 328 TAPLIRNKKVDTFYYVGLTGFSVGG--QAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQ 386 (495)
Q Consensus 328 ~tpl~~~~~~~~~y~V~l~gIsVgg--~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 386 (495)
.+|+... ..+|+++ |.||. +.+. ++||||++.+|+|..
T Consensus 4 ~~~l~~~---~~~Y~~~---i~iGtP~Q~~~---------------v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 4 SLSLINE---GPSYASK---VSVGSNKQQQT---------------VIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEEEC---SSSEEEE---EEETTTTEEEE---------------EEEETTCCCEEEEEE
T ss_pred eeEEEcC---CCEEEEE---EEEcCCCcEEE---------------EEEeCCCCceEEecC
Confidence 4566543 3567766 67773 3333 799999999999843
No 59
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=27.78 E-value=57 Score=31.57 Aligned_cols=37 Identities=27% Similarity=0.408 Sum_probs=25.6
Q ss_pred eeeeecCCCCCeeEEEEeeeeEec--CeeeecCCCccccccCCCCcEEEccCccceeecH
Q 011045 328 TAPLIRNKKVDTFYYVGLTGFSVG--GQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQT 385 (495)
Q Consensus 328 ~tpl~~~~~~~~~y~V~l~gIsVg--g~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~ 385 (495)
.+||... ...|+++ |.|| .+.+. ++||||++.+|++.
T Consensus 4 ~~~l~n~---~~~Y~~~---i~iGTP~q~~~---------------v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 4 SVPATNQ---LVDYVVN---VGVGSPATTYS---------------LLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEEEC---SSCEEEE---EEETTTTEEEE---------------EEEETTCCCCEECS
T ss_pred cEeeecc---CcEEEEE---EEECCCCcEEE---------------EEEeCCChhheecC
Confidence 4566543 3567665 7787 33333 79999999999985
No 60
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=27.65 E-value=54 Score=30.10 Aligned_cols=40 Identities=28% Similarity=0.591 Sum_probs=25.5
Q ss_pred eeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecHH
Q 011045 329 APLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQ 386 (495)
Q Consensus 329 tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 386 (495)
+||... ....|+++ |.||. |+..+ .++||||++.+|+|..
T Consensus 5 ~~l~n~--~~~~Y~~~---i~iGt-----P~q~~--------~v~~DTGSs~lWv~~~ 44 (239)
T 1b5f_A 5 VALTND--RDTSYFGE---IGIGT-----PPQKF--------TVIFDTGSSVLWVPSS 44 (239)
T ss_dssp EEEEEE--TTTEEEEE---EEETT-----TTEEE--------EEEEETTCCCEEEEBT
T ss_pred eeeeec--CCCEEEEE---EEECC-----CCeEE--------EEEEeCCCcceEEEcC
Confidence 455432 23567765 67873 22222 2799999999999864
No 61
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=26.43 E-value=55 Score=29.74 Aligned_cols=27 Identities=26% Similarity=0.321 Sum_probs=24.0
Q ss_pred EEEEEEeCCCCcEEEEEEecCCCCeeEeC
Q 011045 159 YFSRIGVGTPPRQFSMVLDTGSDINWLQC 187 (495)
Q Consensus 159 Y~~~i~IGTP~q~~~livDTGS~~~WV~c 187 (495)
-.+++.|| +|.+.+++|||.|++-+.-
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeec
Confidence 57889999 8999999999999999953
No 62
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=25.91 E-value=81 Score=30.75 Aligned_cols=42 Identities=24% Similarity=0.267 Sum_probs=28.8
Q ss_pred CceeeeeecCCCCCeeEEEEeeeeEec--CeeeecCCCccccccCCCCcEEEccCccceeecHH
Q 011045 325 DAVTAPLIRNKKVDTFYYVGLTGFSVG--GQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQ 386 (495)
Q Consensus 325 ~~~~tpl~~~~~~~~~y~V~l~gIsVg--g~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 386 (495)
.+...|+... ....|+++ |.|| .+.+. ++||||++.+|+|..
T Consensus 6 ~~~~~~l~~~--~~~~Y~~~---i~iGtP~q~~~---------------v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 6 SVDTPGLYDF--DLEEYAIP---VSIGTPGQDFY---------------LLFDTGSSDTWVPHK 49 (361)
T ss_dssp CEEEEEEEET--TTTEEEEE---EEETTTTEEEE---------------EEEETTCCCCEEEBT
T ss_pred ccceEEeecC--CCCEEEEE---EEECCCCcEEE---------------EEEcCCCCCeEECCC
Confidence 4455677642 23577765 7788 34433 799999999999965
No 63
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=25.90 E-value=82 Score=30.32 Aligned_cols=33 Identities=21% Similarity=0.320 Sum_probs=23.8
Q ss_pred CeeEEEEeeeeEec--CeeeecCCCccccccCCCCcEEEccCccceeecHHHH
Q 011045 338 DTFYYVGLTGFSVG--GQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQAY 388 (495)
Q Consensus 338 ~~~y~V~l~gIsVg--g~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~~ 388 (495)
...|+++ |+|| .+.+. ++||||++.+|+|..-.
T Consensus 14 ~~~Y~~~---i~iGTP~Q~~~---------------v~~DTGSs~lWv~~~~C 48 (329)
T 3c9x_A 14 DSEYITS---VSIGTPAQVLP---------------LDFDTGSSDLWVFSSET 48 (329)
T ss_dssp CCCEEEE---EEETTTTEEEE---------------EEEETTCCCEEECBTTS
T ss_pred CCEEEEE---EEECCCCeEEE---------------EEEcCCCCCeEEecCCC
Confidence 3567654 7788 34433 79999999999997543
No 64
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=25.54 E-value=73 Score=30.69 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=22.6
Q ss_pred CeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecHH
Q 011045 338 DTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQ 386 (495)
Q Consensus 338 ~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 386 (495)
...|+++ |.||. |+..+ .++||||++.+|+|..
T Consensus 11 ~~~Y~~~---i~iGt-----P~q~~--------~v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 11 QVTYAAD---ITVGS-----NNQKL--------NVIVDTGSSDLWVPDV 43 (342)
T ss_dssp SSSEEEE---EEETT-----TTEEE--------EEEEETTCCCEEEEEE
T ss_pred CcEEEEE---EEEcC-----CCcEE--------EEEEECCCcceEEEcC
Confidence 3567766 67773 22222 2799999999999854
No 65
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=24.89 E-value=84 Score=30.11 Aligned_cols=42 Identities=24% Similarity=0.504 Sum_probs=27.1
Q ss_pred eeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecHH
Q 011045 327 VTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQ 386 (495)
Q Consensus 327 ~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 386 (495)
...||... ....|+++ |.||. |+..+ .++||||++.+|+|..
T Consensus 4 ~~~~l~n~--~~~~Y~~~---i~iGt-----P~q~~--------~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 4 ASVPLTNY--LDSQYFGK---IYLGT-----PPQEF--------TVLFDTGSSDFWVPSI 45 (323)
T ss_dssp EEEEEEEE--TTTEEEEE---EEETT-----TTEEE--------EEEEETTCCCEEEEBT
T ss_pred ceeeeEec--cCCEEEEE---EEECC-----CCeEE--------EEEEeCCccceEEcCC
Confidence 44566542 23567765 67873 22222 2799999999999965
No 66
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=23.99 E-value=62 Score=31.13 Aligned_cols=31 Identities=23% Similarity=0.444 Sum_probs=23.1
Q ss_pred CeeEEEEeeeeEec--CeeeecCCCccccccCCCCcEEEccCccceeecHH
Q 011045 338 DTFYYVGLTGFSVG--GQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQ 386 (495)
Q Consensus 338 ~~~y~V~l~gIsVg--g~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 386 (495)
...|+++ |.|| .+.+. ++||||++.+|+|..
T Consensus 14 ~~~Y~~~---i~iGTP~q~~~---------------v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 14 DIEYYGQ---VTIGTPGKKFN---------------LDFDTGSSDLWIAST 46 (325)
T ss_dssp TTEEEEE---EEETTTTEEEE---------------EEEETTCCCCEEEBT
T ss_pred CCEEEEE---EEECCCCeEEE---------------EEEcCCCCCEEEccC
Confidence 4567665 7788 44433 799999999999964
No 67
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=23.92 E-value=94 Score=29.88 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=23.4
Q ss_pred CeeEEEEeeeeEec--CeeeecCCCccccccCCCCcEEEccCccceeecHHH
Q 011045 338 DTFYYVGLTGFSVG--GQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQA 387 (495)
Q Consensus 338 ~~~y~V~l~gIsVg--g~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~ 387 (495)
...|+++ |.|| .+.+. ++||||++.+|+|..-
T Consensus 14 ~~~Y~~~---i~iGTP~Q~~~---------------v~~DTGSs~lWv~~~~ 47 (329)
T 1oew_A 14 DDAYITP---VQIGTPAQTLN---------------LDFDTGSSDLWVFSSE 47 (329)
T ss_dssp CCCEEEE---EEETTTTEEEE---------------EEEETTCCCEEECBTT
T ss_pred CCEEEEE---EEECCCCeEEE---------------EEECCCCCCeEEecCC
Confidence 4567664 7788 34433 7999999999999643
No 68
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=23.02 E-value=84 Score=31.55 Aligned_cols=44 Identities=16% Similarity=0.244 Sum_probs=30.1
Q ss_pred CceeeeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecH
Q 011045 325 DAVTAPLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQT 385 (495)
Q Consensus 325 ~~~~tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~ 385 (495)
.....|+..+. ....|+++ |.||. |+..| .++||||+.++|+|-
T Consensus 7 ~~~~~pv~~d~-~~~~Y~~~---i~iGT-----Ppq~~--------~v~~DTGS~~lWv~c 50 (413)
T 3vla_A 7 SALVVPVKKDA-STLQYVTT---INQRT-----PLVSE--------NLVVDLGGRFLWVDC 50 (413)
T ss_dssp SEEEEEEEECT-TTCCEEEE---EEETT-----TTEEE--------EEEEETTCSSEEEEC
T ss_pred ccEEEEeeecC-CCCeEEEE---EEcCC-----CCcce--------EEEEeCCChhhhccc
Confidence 34557887774 34567666 66774 33333 379999999999995
No 69
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=22.32 E-value=98 Score=29.61 Aligned_cols=40 Identities=30% Similarity=0.532 Sum_probs=26.0
Q ss_pred eeeecCCCCCeeEEEEeeeeEecCeeeecCCCccccccCCCCcEEEccCccceeecHH
Q 011045 329 APLIRNKKVDTFYYVGLTGFSVGGQAVQIPPSLFEMDEAGDGGIIVDCGTAITRLQTQ 386 (495)
Q Consensus 329 tpl~~~~~~~~~y~V~l~gIsVgg~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~ 386 (495)
.||... ....|+++ |.||. |+..+ .++||||++.+|+|..
T Consensus 4 ~~l~n~--~~~~Y~~~---i~iGt-----P~q~~--------~v~~DTGSs~~Wv~~~ 43 (324)
T 1am5_A 4 EQMKNE--ADTEYYGV---ISIGT-----PPESF--------KVIFDTGSSNLWVSSS 43 (324)
T ss_dssp EEEEEE--TTTEEEEE---EEETT-----TTEEE--------EEEEETTCCCEEECBT
T ss_pred eeeecC--CCCEEEEE---EEECC-----CCeEE--------EEEEeCCCcceEEecC
Confidence 455532 23567766 66773 22222 2799999999999965
No 70
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=20.07 E-value=84 Score=30.17 Aligned_cols=16 Identities=19% Similarity=0.426 Sum_probs=14.1
Q ss_pred EEEccCccceeecHHH
Q 011045 372 IIVDCGTAITRLQTQA 387 (495)
Q Consensus 372 ~iiDSGTt~t~Lp~~~ 387 (495)
++||||++.+|+|...
T Consensus 30 v~~DTGSs~lWv~~~~ 45 (329)
T 1dpj_A 30 VILDTGSSNLWVPSNE 45 (329)
T ss_dssp EEEETTCCCEEEEBTT
T ss_pred EEEeCCCcCeEEecCC
Confidence 7999999999998653
Done!