Query 011046
Match_columns 495
No_of_seqs 206 out of 2292
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 07:30:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011046.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011046hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2737 Putative metallopeptid 100.0 1.2E-90 2.7E-95 663.1 33.7 475 11-489 11-487 (492)
2 PRK10879 proline aminopeptidas 100.0 1.9E-79 4.2E-84 638.1 47.2 423 12-482 1-434 (438)
3 KOG2414 Putative Xaa-Pro amino 100.0 1.1E-74 2.3E-79 559.5 32.8 420 5-482 55-486 (488)
4 PRK13607 proline dipeptidase; 100.0 8.5E-71 1.8E-75 571.7 43.0 426 14-468 5-438 (443)
5 COG0006 PepP Xaa-Pro aminopept 100.0 1.4E-61 3E-66 499.4 35.3 372 10-476 3-383 (384)
6 TIGR02993 ectoine_eutD ectoine 100.0 3.7E-61 8E-66 496.0 35.9 374 9-475 3-389 (391)
7 PRK09795 aminopeptidase; Provi 100.0 3.3E-60 7.2E-65 485.0 37.0 346 19-474 2-356 (361)
8 PRK14575 putative peptidase; P 100.0 8.3E-57 1.8E-61 465.1 37.5 358 20-474 12-403 (406)
9 PRK14576 putative endopeptidas 100.0 3.5E-55 7.7E-60 452.8 39.3 360 18-474 10-402 (405)
10 PRK15173 peptidase; Provisiona 100.0 2.5E-51 5.5E-56 411.6 31.9 274 129-475 44-321 (323)
11 PRK12897 methionine aminopepti 100.0 3E-49 6.5E-54 383.6 27.5 241 186-469 3-248 (248)
12 PRK07281 methionine aminopepti 100.0 3.3E-49 7.1E-54 387.3 27.7 246 185-472 2-283 (286)
13 PRK12318 methionine aminopepti 100.0 3.9E-48 8.4E-53 382.1 27.4 251 178-471 33-291 (291)
14 cd01087 Prolidase Prolidase. E 100.0 1.4E-47 3.1E-52 371.2 27.7 243 193-468 1-243 (243)
15 PRK05716 methionine aminopepti 100.0 6.3E-47 1.4E-51 368.8 28.2 245 185-472 3-252 (252)
16 TIGR00500 met_pdase_I methioni 100.0 6.3E-47 1.4E-51 367.6 27.3 240 186-468 2-246 (247)
17 PLN03158 methionine aminopepti 100.0 1.1E-46 2.4E-51 382.8 28.2 252 181-474 131-387 (396)
18 cd01090 Creatinase Creatine am 100.0 1.8E-46 3.8E-51 359.0 25.8 222 193-468 1-228 (228)
19 PRK12896 methionine aminopepti 100.0 9.9E-46 2.2E-50 361.0 27.2 243 184-468 7-254 (255)
20 cd01091 CDC68-like Related to 100.0 5.1E-44 1.1E-48 344.1 24.3 225 193-468 1-243 (243)
21 cd01086 MetAP1 Methionine Amin 100.0 2.1E-42 4.5E-47 334.1 26.4 233 193-468 1-238 (238)
22 cd01092 APP-like Similar to Pr 100.0 2.3E-42 5E-47 326.8 25.1 208 193-463 1-208 (208)
23 cd01085 APP X-Prolyl Aminopept 100.0 1E-41 2.3E-46 324.6 24.2 210 194-466 5-222 (224)
24 PF00557 Peptidase_M24: Metall 100.0 1.9E-40 4.2E-45 313.5 21.4 206 194-460 1-207 (207)
25 cd01066 APP_MetAP A family inc 100.0 3.2E-38 6.9E-43 297.1 24.6 207 193-463 1-207 (207)
26 cd01089 PA2G4-like Related to 100.0 3.7E-38 8.1E-43 302.0 23.6 214 193-468 1-228 (228)
27 KOG1189 Global transcriptional 100.0 9.5E-38 2.1E-42 320.9 18.9 361 58-483 9-392 (960)
28 COG0024 Map Methionine aminope 100.0 2.5E-35 5.4E-40 279.3 27.2 242 187-470 5-253 (255)
29 KOG2738 Putative methionine am 100.0 1.5E-35 3.3E-40 276.5 22.2 244 185-471 114-363 (369)
30 PRK08671 methionine aminopepti 100.0 6.8E-32 1.5E-36 267.1 26.5 189 192-418 1-190 (291)
31 PTZ00053 methionine aminopepti 100.0 1.6E-31 3.4E-36 273.9 27.2 204 185-420 150-363 (470)
32 TIGR00501 met_pdase_II methion 100.0 2.6E-31 5.7E-36 263.1 26.1 189 190-416 2-191 (295)
33 cd01088 MetAP2 Methionine Amin 100.0 7.1E-31 1.5E-35 259.9 25.0 187 193-417 1-188 (291)
34 COG5406 Nucleosome binding fac 100.0 9.3E-32 2E-36 271.6 18.6 400 10-485 4-434 (1001)
35 TIGR00495 crvDNA_42K 42K curve 100.0 1.6E-30 3.4E-35 265.4 27.9 209 185-421 11-236 (389)
36 KOG2413 Xaa-Pro aminopeptidase 99.9 1.1E-26 2.5E-31 237.0 18.8 240 178-474 298-557 (606)
37 PF05195 AMP_N: Aminopeptidase 99.8 1.6E-20 3.5E-25 164.1 7.8 124 12-147 1-125 (134)
38 KOG2776 Metallopeptidase [Gene 99.3 1.1E-10 2.4E-15 113.3 15.2 149 187-339 15-178 (398)
39 KOG2775 Metallopeptidase [Gene 99.1 3.1E-09 6.7E-14 100.8 15.0 197 191-414 83-284 (397)
40 PF01321 Creatinase_N: Creatin 98.6 5E-08 1.1E-12 84.7 4.7 123 20-187 1-132 (132)
41 PF14826 FACT-Spt16_Nlob: FACT 98.4 2.7E-07 5.8E-12 83.2 3.5 156 12-180 1-162 (163)
42 PLN03158 methionine aminopepti 96.7 0.013 2.8E-07 60.6 10.7 55 284-339 126-182 (396)
43 cd01086 MetAP1 Methionine Amin 96.1 0.052 1.1E-06 52.1 11.0 38 301-338 2-39 (238)
44 KOG2738 Putative methionine am 96.0 0.036 7.8E-07 53.6 8.6 88 301-418 123-211 (369)
45 COG0024 Map Methionine aminope 95.4 0.085 1.8E-06 50.9 9.0 88 302-418 13-101 (255)
46 cd01088 MetAP2 Methionine Amin 95.3 0.14 3.1E-06 50.9 10.6 39 301-339 2-40 (291)
47 PRK12896 methionine aminopepti 94.9 0.18 3.9E-06 48.9 9.8 49 289-338 4-54 (255)
48 cd01066 APP_MetAP A family inc 94.7 0.51 1.1E-05 43.5 12.0 99 194-295 102-202 (207)
49 TIGR00495 crvDNA_42K 42K curve 93.7 0.61 1.3E-05 48.3 11.2 39 302-340 21-59 (389)
50 PRK05716 methionine aminopepti 93.6 0.8 1.7E-05 44.3 11.4 96 196-295 120-238 (252)
51 TIGR00500 met_pdase_I methioni 93.5 1 2.2E-05 43.4 11.8 97 196-295 118-236 (247)
52 cd01092 APP-like Similar to Pr 92.2 2.5 5.4E-05 39.3 12.2 97 195-295 104-203 (208)
53 TIGR02993 ectoine_eutD ectoine 92.0 1.6 3.5E-05 45.3 11.5 98 195-295 271-372 (391)
54 cd01091 CDC68-like Related to 91.8 1.9 4E-05 41.7 10.9 99 195-295 120-232 (243)
55 PRK12897 methionine aminopepti 91.7 1.5 3.2E-05 42.4 10.2 95 196-295 119-237 (248)
56 cd01090 Creatinase Creatine am 91.2 3.1 6.7E-05 39.7 11.8 96 196-295 111-218 (228)
57 PTZ00053 methionine aminopepti 91.2 2.5 5.5E-05 44.6 11.9 88 303-418 161-248 (470)
58 PRK12318 methionine aminopepti 90.6 3.1 6.8E-05 41.3 11.5 84 195-283 159-247 (291)
59 cd01089 PA2G4-like Related to 90.6 2.7 5.9E-05 40.0 10.8 91 195-295 121-218 (228)
60 PF00557 Peptidase_M24: Metall 90.2 4.1 8.9E-05 37.9 11.5 96 196-295 104-205 (207)
61 TIGR00501 met_pdase_II methion 89.2 3.9 8.3E-05 40.7 10.9 39 301-339 6-44 (295)
62 PRK09795 aminopeptidase; Provi 88.8 6.1 0.00013 40.5 12.5 102 190-295 236-340 (361)
63 PRK07281 methionine aminopepti 88.7 3.9 8.6E-05 40.5 10.5 82 196-282 150-237 (286)
64 PRK08671 methionine aminopepti 88.5 8 0.00017 38.4 12.6 95 196-295 103-204 (291)
65 PRK15173 peptidase; Provisiona 87.8 6 0.00013 39.9 11.4 97 195-295 203-304 (323)
66 PRK14575 putative peptidase; P 87.5 5.3 0.00011 41.7 11.1 97 195-295 286-387 (406)
67 PRK14576 putative endopeptidas 86.7 7.9 0.00017 40.4 11.8 97 195-295 285-386 (405)
68 cd01087 Prolidase Prolidase. E 86.2 9.3 0.0002 36.6 11.4 100 195-295 104-233 (243)
69 COG0006 PepP Xaa-Pro aminopept 85.7 8.3 0.00018 39.9 11.4 96 196-295 264-365 (384)
70 KOG2775 Metallopeptidase [Gene 84.9 6.7 0.00015 38.4 9.2 91 301-420 86-177 (397)
71 KOG2776 Metallopeptidase [Gene 75.5 23 0.00049 35.8 9.6 110 302-461 23-133 (398)
72 cd01085 APP X-Prolyl Aminopept 75.4 19 0.00042 34.1 9.1 37 302-338 5-43 (224)
73 PRK10879 proline aminopeptidas 65.7 57 0.0012 34.4 10.9 37 302-338 181-217 (438)
74 PF07305 DUF1454: Protein of u 48.6 82 0.0018 28.9 7.2 39 301-339 115-153 (200)
75 KOG1189 Global transcriptional 39.8 1.6E+02 0.0035 32.9 9.0 94 196-295 259-366 (960)
76 PRK13607 proline dipeptidase; 39.7 1.4E+02 0.003 31.6 8.7 35 197-231 271-305 (443)
77 COG5406 Nucleosome binding fac 38.1 1E+02 0.0023 33.6 7.2 71 206-280 310-385 (1001)
78 PF09851 SHOCT: Short C-termin 29.5 53 0.0012 20.6 2.2 15 11-25 16-30 (31)
79 PF11149 DUF2924: Protein of u 28.5 2.3E+02 0.0049 24.7 6.6 35 452-486 94-128 (136)
80 PF14894 Lsm_C: Lsm C-terminal 23.2 1E+02 0.0022 23.1 2.9 33 448-480 26-59 (64)
81 PF00254 FKBP_C: FKBP-type pep 21.1 1.2E+02 0.0026 23.9 3.4 52 265-326 2-60 (94)
82 PRK05728 DNA polymerase III su 20.6 5.6E+02 0.012 22.2 7.8 94 195-295 14-109 (142)
No 1
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=1.2e-90 Score=663.06 Aligned_cols=475 Identities=66% Similarity=1.123 Sum_probs=449.4
Q ss_pred CCCHHHHHHHHHHHHHHhhhhhccC--CCCCCeEEEEeCCcceeeecCCcccccccCCCceeecCCCCCCeEEEEEecCC
Q 011046 11 KVPKELYFINREKVLNSLRQHLTET--SRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATG 88 (495)
Q Consensus 11 ~~~~~~y~~R~~~l~~~~~~~~~~~--~~~~~~~~v~~g~~~~~~~~~d~~~~f~~~sn~~YLtG~~~~~~~lvl~~~~g 88 (495)
.+|.+.|..+|.|+-++++...... +++..+++++.|++++.||.+|..+.|||++.|+||+|.++|+++.+|...+|
T Consensus 11 ~vP~~lf~~nr~rl~~~lr~k~~~~nr~~~~~s~vllqgGeE~nrYctD~~~lFrQesYF~~lfGV~ep~~yg~idv~tg 90 (492)
T KOG2737|consen 11 LVPMELFAGNRKRLLEALRKKLLSSNRSLDGGSFVLLQGGEEKNRYCTDTTELFRQESYFAYLFGVREPGFYGAIDVGTG 90 (492)
T ss_pred eecHHHhhcchHHHHHHHHhhcccccccccCceEEEEecchhhcccccchHHHHhhhhHHHHhhcCCCccceEEEEecCC
Confidence 3899999999999999988753211 24445799999999999999999999999999999999999999999988899
Q ss_pred eeEEecCCCCcccccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCchhhhhhhc
Q 011046 89 KSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGME 168 (495)
Q Consensus 89 ~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~l~ 168 (495)
+.+||+|+++.+.+.|.|.+.+.+++++.+.+|.+.+.+++...+... +++-++.+.+.++|+++.+....|.+..
T Consensus 91 KstLFvPrlp~~ya~W~G~i~~l~~fke~y~VDev~yvde~~~~~~~~----~~k~l~~l~g~nTDsg~v~~e~~f~g~~ 166 (492)
T KOG2737|consen 91 KSTLFVPRLPDSYATWMGEILSLQHFKEKYAVDEVFYVDEIIQVLKGS----KPKLLYLLRGLNTDSGNVLKEASFAGIS 166 (492)
T ss_pred ceEEEecCCChhhceeccccCCHHHHHHHhhhhheeehHhHHHHhhcc----CccceeeeeccccCcccccCcccccchh
Confidence 999999999999999999999999999999999999999999988665 7888999999999999888888888777
Q ss_pred cccccccchHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeee
Q 011046 169 KFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICAT 248 (495)
Q Consensus 169 ~~~~~~~d~~~~i~~lR~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~s 248 (495)
.+..+..-+.+++.+.|.|||+.||+.||.|++|+++|+.++|++++||+.|+++++.+++.....||+...+|.+||+|
T Consensus 167 kf~~D~~~lyp~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh~sYtcIc~s 246 (492)
T KOG2737|consen 167 KFETDLTLLYPILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRHLSYTCICAS 246 (492)
T ss_pred hcccCchhhhHHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccccccceeeec
Confidence 77667677889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Q 011046 249 GENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWV 328 (495)
Q Consensus 249 G~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~ 328 (495)
|.|++++||.+.+.||++.+|.||++++|.|++|++|.|||||+|+++|++|++|+.+|+++++++.++++++|||+.|.
T Consensus 247 G~ns~vLHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~ 326 (492)
T KOG2737|consen 247 GDNSAVLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWV 326 (492)
T ss_pred CCCcceeeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 99999999988789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCC
Q 011046 329 DMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERM 408 (495)
Q Consensus 329 dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GM 408 (495)
|+|..+.+++-++|++.|+++++++++++++.++.|+||++||.+||++||+++|+.+.+||..|++.+.+..+.|++||
T Consensus 327 Dmh~La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~M 406 (492)
T KOG2737|consen 327 DMHKLAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGM 406 (492)
T ss_pred cHHHHHHHHHHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCc
Confidence 99999999999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred EEEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCCCCCCHHHHHHHHhcCCCCCC
Q 011046 409 VITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAGAPWPSN 488 (495)
Q Consensus 409 v~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~~p~~~~~Ie~~~~~~~~~~~ 488 (495)
|+|+|||+||++.++++.+.||..+.|+|...++.|.++|||||||+|+||++|+|+||.+||+.++||+.|++..|+-+
T Consensus 407 viTvEPGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~enlt~vprtveeIEa~ma~g~~~p~ 486 (492)
T KOG2737|consen 407 VITVEPGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENLTCVPRTVEEIEACMAGGDKAPT 486 (492)
T ss_pred EEEecCChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEeccccccccCCCCCHHHHHHHHhcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999843
Q ss_pred C
Q 011046 489 K 489 (495)
Q Consensus 489 ~ 489 (495)
|
T Consensus 487 ~ 487 (492)
T KOG2737|consen 487 K 487 (492)
T ss_pred c
Confidence 3
No 2
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=1.9e-79 Score=638.09 Aligned_cols=423 Identities=33% Similarity=0.520 Sum_probs=363.0
Q ss_pred CCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCcceeeecCCcccccccCCCceeecCCCCCCeEEEEEecC---C
Q 011046 12 VPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIAT---G 88 (495)
Q Consensus 12 ~~~~~y~~R~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~d~~~~f~~~sn~~YLtG~~~~~~~lvl~~~~---g 88 (495)
++.++|.+||++|.+.|.+ ++++|+.++....++ .|+.|||||++||+||||+++|++++++.+.. .
T Consensus 1 ~~~~~~~~rR~~l~~~~~~---------~~~~v~~~~~~~~~~-~d~~y~Frq~s~F~YltG~~ep~~~lv~~~~~~~~~ 70 (438)
T PRK10879 1 MTQQEFQRRRQALLAKMQP---------GSAALIFAAPEATRS-ADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHN 70 (438)
T ss_pred CChHHHHHHHHHHHhhCCC---------CcEEEEeCCCccccC-CCCCCCccCCCceeeeeCCCCCCeEEEEecCCCCCC
Confidence 4678999999999999976 478899999998884 79999999999999999999999988775532 3
Q ss_pred eeEEecCCCCcccccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCchhhhhhhc
Q 011046 89 KSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGME 168 (495)
Q Consensus 89 ~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~l~ 168 (495)
+.+||+++++...+.|.|.+.+.+.+++.+++|.+.+.+++.+.|..++. +...++...+..... .......+..+.
T Consensus 71 ~~~Lf~~~~d~~~e~W~G~~~~~~~a~~~~g~d~v~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 147 (438)
T PRK10879 71 HSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALPFSEINQQLYQLLN--GLDVVYHAQGEYAYA-DEIVFSALEKLR 147 (438)
T ss_pred eEEEEeCCCCCCccEEcCcCCCHHHHHHHhCCCEEeeHHHHHHHHHHHhc--CCceEEecCCccccc-hhHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999988764 344555432211000 001011111111
Q ss_pred c-------ccccccchHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCC
Q 011046 169 K-------FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCS 241 (495)
Q Consensus 169 ~-------~~~~~~d~~~~i~~lR~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~ 241 (495)
. ...+++|+.+++.++|+|||++||+.||+|+++++.++.++++.++||+||.||++.+.+.+.++ |+...+
T Consensus 148 ~~~~~~~~~~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~-G~~~~~ 226 (438)
T PRK10879 148 KGSRQNLTAPATLTDWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRH-GARYPS 226 (438)
T ss_pred hhhccccCCcccchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHC-CCCCCC
Confidence 1 02467899999999999999999999999999999999999999999999999999998888766 777788
Q ss_pred ccceeeeCCCccccccCCCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 011046 242 YTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAM 321 (495)
Q Consensus 242 ~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~i 321 (495)
|+++|++|.|++++||.+ ++++|++||+|++|+|+.|+||++|+||||+++|+||++|+++|++++++|+++++++
T Consensus 227 ~~~iv~~G~na~~~H~~~----~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~ 302 (438)
T PRK10879 227 YNTIVGSGENGCILHYTE----NESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLY 302 (438)
T ss_pred CCcEEEEcCccccccCCC----CccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999764 8899999999999999999999999999999989999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCC
Q 011046 322 KPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTV 401 (495)
Q Consensus 322 kpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~ 401 (495)
|||+++++|+.++.+++.+.|.++|++++.++++++......||+|++||+|||++||.|.+. .+++
T Consensus 303 kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~-------------~~~~ 369 (438)
T PRK10879 303 RPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYG-------------QDRS 369 (438)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCCcC-------------CCCC
Confidence 999999999999999999999999999988888876666667999999999999999977542 1246
Q ss_pred CccCCCCEEEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCC-CCCCCHHHHHHHH
Q 011046 402 RELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPREISDIEAIM 480 (495)
Q Consensus 402 ~~l~~GMv~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT-~~p~~~~~Ie~~~ 480 (495)
.+|+||||||||||+|+.+ ++++++.|.|. ||||||||+||++|+|+|| .+||++++||++|
T Consensus 370 ~~L~~GmV~tvEPgiY~~~----------------~~~~~~~~~~~-GiRiED~VlVT~~G~e~LT~~~pk~~~~iE~~m 432 (438)
T PRK10879 370 RILEPGMVLTVEPGLYIAP----------------DADVPEQYRGI-GIRIEDDIVITETGNENLTASVVKKPDEIEALM 432 (438)
T ss_pred CcCCCCCEEEECCEEEECC----------------CcCcccccCcc-EEEeccEEEECCCcCeEcCccCCCCHHHHHHHH
Confidence 7899999999999999854 12345555666 9999999999999999999 7999999999999
Q ss_pred hc
Q 011046 481 AG 482 (495)
Q Consensus 481 ~~ 482 (495)
++
T Consensus 433 ~~ 434 (438)
T PRK10879 433 AA 434 (438)
T ss_pred Hh
Confidence 75
No 3
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-74 Score=559.54 Aligned_cols=420 Identities=26% Similarity=0.408 Sum_probs=360.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCcceeeecCCcccccccCCCceeecCCCCCCeEEEEE
Q 011046 5 SSLSPPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAID 84 (495)
Q Consensus 5 ~~~~~~~~~~~~y~~R~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~d~~~~f~~~sn~~YLtG~~~~~~~lvl~ 84 (495)
|++.+|.++..||+.||.||.+.+++ ++++|+.+++ ...++++.+|+|+|++||+||||+.+|+.++++.
T Consensus 55 pgEltPgis~~Ey~~RR~rl~~ll~~---------~a~~il~sap-~~~msg~ipY~f~Qd~df~YLtGc~EP~~vl~l~ 124 (488)
T KOG2414|consen 55 PGELTPGISATEYKERRSRLMSLLPA---------NAMVILGSAP-VKYMSGAIPYTFRQDNDFYYLTGCLEPDAVLLLL 124 (488)
T ss_pred CCCcCCCccHHHHHHHHHHHHHhCCc---------ccEEEEccCc-hhhhcCccceeeecCCCeEEEeccCCCCeeEEEe
Confidence 67788999999999999999999987 4788886654 4556888999999999999999999999988886
Q ss_pred ecCC---eeEEecCCCCcccccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCch
Q 011046 85 IATG---KSILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKP 161 (495)
Q Consensus 85 ~~~g---~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 161 (495)
+.+. ...+|+|++++..+.|+|.+.+...+.+.+++++..+.+.+..+|.+.... ...+.. +..... ..
T Consensus 125 ~~d~~s~~~~lf~p~kdP~~e~WeG~rtG~~~a~~if~v~ea~~~s~l~~~L~k~~~~--~~~i~~----d~~ss~--a~ 196 (488)
T KOG2414|consen 125 KGDERSVAYDLFMPPKDPTAELWEGPRTGTDGASEIFGVDEAYPLSGLAVFLPKMSAL--LYKIWQ----DKASSK--AS 196 (488)
T ss_pred ecccccceeeEecCCCCccHHhhcCccccchhhhhhhcchhhcchhhHHHHHHHHHhh--hhhhhh----hhccch--hh
Confidence 4222 468999999999999999998887888888899888888898888776421 112211 000000 01
Q ss_pred hhhhh---hcc---ccccccchHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcC
Q 011046 162 AQFEG---MEK---FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYG 235 (495)
Q Consensus 162 ~~~~~---l~~---~~~~~~d~~~~i~~lR~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~ 235 (495)
..++. +.. ....++.++.++.++|.|||++|+++||+||.|+++++-..+-.-|++..|..+.+.+++.++.+
T Consensus 197 s~~~~~~dl~~~~~~~~~~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~r- 275 (488)
T KOG2414|consen 197 SALKNMQDLLGFQSKSSTVRPVSNLIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRR- 275 (488)
T ss_pred hHHHHHHhhhhhcccCcccccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeec-
Confidence 11111 111 12347889999999999999999999999999999999999999999999999999999998766
Q ss_pred CCCCCCccceeeeCCCccccccCCCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHH
Q 011046 236 GCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHN 315 (495)
Q Consensus 236 G~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~ 315 (495)
|++..+|+|+|+.|.|+.+.||.. ++..++++|+|++|.||.++||+|||||||+++|++|+.|+++|++++..|+
T Consensus 276 Gad~~AYpPVVAgG~na~tIHY~~----Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ 351 (488)
T KOG2414|consen 276 GADRLAYPPVVAGGKNANTIHYVR----NNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQE 351 (488)
T ss_pred CccccccCCeeecCcccceEEEee----cccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHH
Confidence 999999999999999999999998 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCC--CCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCC
Q 011046 316 AVINAMKP--GVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEP 393 (495)
Q Consensus 316 ~~~~~ikp--G~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~ 393 (495)
.+++.++| |.+..+++......+.++|++.|+.+..-+++. ....++||++||-+||||||+|..+
T Consensus 352 ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~---~~~klcPHhVgHyLGmDVHD~p~v~--------- 419 (488)
T KOG2414|consen 352 ECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMI---QAEKLCPHHVGHYLGMDVHDCPTVS--------- 419 (488)
T ss_pred HHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHH---hhhhcCCcccchhcCcccccCCCCC---------
Confidence 99999999 999999999999999999999998766555555 2346899999999999999987443
Q ss_pred CCcCCCCCCccCCCCEEEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCC-CCCCC
Q 011046 394 GLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPRE 472 (495)
Q Consensus 394 ~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT-~~p~~ 472 (495)
.+.+|+||||||||||+|++. ++++|++|.|. |+||||+|+|+|||.++|| .+||+
T Consensus 420 ------r~~pL~pg~ViTIEPGvYIP~----------------d~d~P~~FrGI-GiRIEDDV~i~edg~evLT~a~pKe 476 (488)
T KOG2414|consen 420 ------RDIPLQPGMVITIEPGVYIPE----------------DDDPPEEFRGI-GIRIEDDVAIGEDGPEVLTAACPKE 476 (488)
T ss_pred ------CCccCCCCceEEecCceecCc----------------cCCCchHhcCc-eEEeecceEeccCCceeehhcccCC
Confidence 357899999999999999976 45788889999 9999999999999999999 89999
Q ss_pred HHHHHHHHhc
Q 011046 473 ISDIEAIMAG 482 (495)
Q Consensus 473 ~~~Ie~~~~~ 482 (495)
+.+||.+|+-
T Consensus 477 i~~ie~l~~~ 486 (488)
T KOG2414|consen 477 IIEIERLMKQ 486 (488)
T ss_pred HHHHHHHHhc
Confidence 9999999964
No 4
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=8.5e-71 Score=571.73 Aligned_cols=426 Identities=31% Similarity=0.462 Sum_probs=343.5
Q ss_pred HHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCcceeeecCCcccccccCCCceeecCCC-CCCeEEEEEecCC-eeE
Q 011046 14 KELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVR-EPGFYGAIDIATG-KSI 91 (495)
Q Consensus 14 ~~~y~~R~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~d~~~~f~~~sn~~YLtG~~-~~~~~lvl~~~~g-~~~ 91 (495)
.+.|.+.|+++.+++++.....+ .+.+|+.++....++..|+.|||||+++|+||||+. +|++++++.+.++ +.+
T Consensus 5 ~~~~~~~~~~~~~r~~~~~~~~~---~~~i~l~~g~~~~~~~~D~~~~Frq~s~F~yl~G~~~~p~~~~~i~~~~~~~~~ 81 (443)
T PRK13607 5 ASLYKEHIATLQQRTRDALAREG---LDALLIHSGELHRVFLDDHDYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLW 81 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC---CCEEEEECCCcccccCCCCCCCcCcCCCcchhcCCCCCCCeEEEEEeCCCCEEE
Confidence 46799999999988866543222 245677777777777889999999999999999996 7999988876434 555
Q ss_pred EecCCCCcccccccccCCC-hhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCchhhhhhhccc
Q 011046 92 LFAPRLPPDYAVWLGKIKP-LSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKF 170 (495)
Q Consensus 92 l~v~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~l~~~ 170 (495)
||.| .+ .|.+.... .+.+.+.++++.+.+.+.+...|... +.....+ +.... ...+..+...
T Consensus 82 l~~~-~d----~W~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~--~~~~~------~~~~~~~~~~ 144 (443)
T PRK13607 82 FYQP-VD----YWHNVEPLPESFWTEEVDIKALTKADGIASLLPAD----RGNVAYI--GEVPE------RALALGFEAS 144 (443)
T ss_pred EEec-Cc----cccCCCCCchHHHHHhcChHhcccHHHHHHhhccC----CCceEEe--ccccc------ccccccCccc
Confidence 5554 34 49887643 44567888887777777777776542 2222221 21111 0011112222
Q ss_pred cccccchHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCC
Q 011046 171 ETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGE 250 (495)
Q Consensus 171 ~~~~~d~~~~i~~lR~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~ 250 (495)
..+..++.+.|.++|+|||++||++||+|++|++++++++++.++||+||.|+++.+.... ..+....+|++||++|.
T Consensus 145 ~~~~~~l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~--~~~~~~~~y~~iva~G~ 222 (443)
T PRK13607 145 NINPKGVLDYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT--GQRDNDVPYGNIVALNE 222 (443)
T ss_pred ccChHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh--CCCCcCCCCCcEEEecC
Confidence 2456678899999999999999999999999999999999999999999999998765432 22455688999999999
Q ss_pred CccccccCCCCCCCC-CccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHH
Q 011046 251 NSAVLHYGHAAAPND-RTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVD 329 (495)
Q Consensus 251 ~~~~~h~~~~~~p~~-~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~d 329 (495)
|++++||.+ ++ +++++||+|++|+|+.|+||+||+||||+ |.++++++++|+++++||+++++++|||+++.|
T Consensus 223 naa~~H~~~----~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~--g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~d 296 (443)
T PRK13607 223 HAAVLHYTK----LDHQAPAEMRSFLIDAGAEYNGYAADITRTYA--AKEDNDFAALIKDVNKEQLALIATMKPGVSYVD 296 (443)
T ss_pred cceEecCCc----cCCCCCCCCCEEEEEeeEEECCEEecceEEEe--cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHH
Confidence 999999865 55 46899999999999999999999999997 678999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCccC-ChHHHHHhhccccccccccccccCcccccCCCCCC---CCCCCCCCCCcCCCCCCccC
Q 011046 330 MHKLAEKIILESLKKGGVMVG-NVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPK---GTERSKEPGLKSLRTVRELQ 405 (495)
Q Consensus 330 v~~~~~~~~~~~l~~~G~~~~-~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~---~~~~~~~~~~~~~~~~~~l~ 405 (495)
|+.++++++.+.|.++|+.++ ++++++++++...||+|++||+|||++||.+.+.. |..++..+...+.++.++|+
T Consensus 297 v~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~ 376 (443)
T PRK13607 297 LHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLE 376 (443)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCCcccccccccccccccccccccCCcCC
Confidence 999999999999999999986 78889999988889999999999999999876642 22222222333445678999
Q ss_pred CCCEEEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCC
Q 011046 406 ERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 468 (495)
Q Consensus 406 ~GMv~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~ 468 (495)
+|||||||||+|+++.+++.+. .++...++||+.+.+|+++|||||||+|+||++|+|+||.
T Consensus 377 ~GmV~TvEPGiY~~~~ll~~~~-~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~G~e~Lt~ 438 (443)
T PRK13607 377 PGMVLTIEPGLYFIDSLLAPLR-EGPFSKHFNWQKIDALKPFGGIRIEDNVVVHENGVENMTR 438 (443)
T ss_pred CCcEEEECCeeeeChhhhchhh-hhhhhhhccHHHHHhhcCCCEEeecceEEEcCCCCeECCh
Confidence 9999999999999988888887 4467789999999999999999999999999999999993
No 5
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-61 Score=499.36 Aligned_cols=372 Identities=31% Similarity=0.440 Sum_probs=294.1
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCcceeeecCCcccccccCCCceeecCCCCCC---eEEEEEec
Q 011046 10 PKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPG---FYGAIDIA 86 (495)
Q Consensus 10 ~~~~~~~y~~R~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~d~~~~f~~~sn~~YLtG~~~~~---~~lvl~~~ 86 (495)
..++..++..|+.+++..|.+. ++ +++ ++ .+.+|++||||+.... ...++++.
T Consensus 3 ~~~~~~~~~~rl~~~~~~~~~~----~~--~~~-~~-----------------~~~~n~~yltg~~~~~~~~~~~~~~~~ 58 (384)
T COG0006 3 LRFADEEYRARLARLRELMEEA----GL--DAL-LL-----------------TSPSNFYYLTGFDAFGFERLQALLVPA 58 (384)
T ss_pred cccchHHHHHHHHHHHHHHHHc----CC--cEE-Ee-----------------cCCCceEEEeCCCCCcccceEEEEEcC
Confidence 3567889999999999999974 44 333 33 3678999999998522 34556677
Q ss_pred CCeeEEecCCCCcccccccccCC--ChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCchhhh
Q 011046 87 TGKSILFAPRLPPDYAVWLGKIK--PLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQF 164 (495)
Q Consensus 87 ~g~~~l~v~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 164 (495)
+++++|+++..+...+.|...+. .+..+.+...... +.+.+.+.+..... ..+++++..... ......+
T Consensus 59 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~g~~~~~~-----~~~~~~~ 129 (384)
T COG0006 59 EGEPVLFVRGRDEEAAKETSWIKLENVEVYEDDEDPAA--PLDLLGALLEELGL--AGKRIGIESASI-----FLTLAAF 129 (384)
T ss_pred CCceEEEEcchhHHHHHhhcccccCceEEEecCCcccc--HHHHHHHHHHhccc--cccceEEEeccC-----ccCHHHH
Confidence 88899999998876655544321 1211111100000 23445555554411 255676533211 1222333
Q ss_pred hhhccc--cccccchHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCc
Q 011046 165 EGMEKF--ETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSY 242 (495)
Q Consensus 165 ~~l~~~--~~~~~d~~~~i~~lR~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~ 242 (495)
..+... ..++++++..+..+|+|||+.||+.||+|+.+++.++.++++.++||+||.|+++.++..+.+. |+++++|
T Consensus 130 ~~l~~~~~~~~~~~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~-G~~~~sf 208 (384)
T COG0006 130 ERLQAALPRAELVDASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKG-GAEGPSF 208 (384)
T ss_pred HHHHhhCCCCEEeccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHc-CCCccCc
Confidence 333322 1268999999999999999999999999999999999999999999999999999999988776 6777899
Q ss_pred cceeeeCCCccccccCCCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhC
Q 011046 243 TCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMK 322 (495)
Q Consensus 243 ~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ik 322 (495)
.+||++|+|+++|||.+ +++.+++||+|++|+|+.|+|||||+||||++ |+|+++|+++|+.+++||+++++++|
T Consensus 209 ~~iv~~G~n~a~pH~~~----~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~-G~~~~~~~~iy~~V~~aq~aa~~~~r 283 (384)
T COG0006 209 DTIVASGENAALPHYTP----SDRKLRDGDLVLIDLGGVYNGYCSDITRTFPI-GKPSDEQREIYEAVLEAQEAAIAAIR 283 (384)
T ss_pred CcEEeccccccCcCCCC----CcccccCCCEEEEEeeeEECCccccceeEEec-CCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999765 89999999999999999999999999999999 89999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccC--cccccCCCCCCCCCCCCCCCCcCCCC
Q 011046 323 PGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPGGYPKGTERSKEPGLKSLRT 400 (495)
Q Consensus 323 pG~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iG--l~~he~~~~~~~~~~~~~~~~~~~~~ 400 (495)
||+++.||+.+++++|.+ .|+ + .+|.|++||++| +++||.|.+ ....+
T Consensus 284 pG~~~~~vd~~ar~~i~~----~g~-------------~-~~~~h~~GHgvG~~l~vhE~p~~------------~~~~~ 333 (384)
T COG0006 284 PGVTGGEVDAAARQVLEK----AGY-------------G-LYFLHGTGHGVGFVLDVHEHPQY------------LSPGS 333 (384)
T ss_pred CCCcHHHHHHHHHHHHHh----cCC-------------c-ccccCCccccCCCCcccCcCccc------------cCCCC
Confidence 999999999999999853 333 3 478999999999 999997631 13346
Q ss_pred CCccCCCCEEEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCCCCCCHHHH
Q 011046 401 VRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDI 476 (495)
Q Consensus 401 ~~~l~~GMv~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~~p~~~~~I 476 (495)
+.+|+|||||++|||+|. +|.+||||||+|+||++|+|+||..|+++..+
T Consensus 334 ~~~L~~GMv~t~Epg~y~--------------------------~g~~GirIEd~vlVte~G~e~LT~~~~~~~~~ 383 (384)
T COG0006 334 DTTLEPGMVFSIEPGIYI--------------------------PGGGGVRIEDTVLVTEDGFEVLTRVPKELLVI 383 (384)
T ss_pred CccccCCcEEEecccccc--------------------------CCCceEEEEEEEEEcCCCceecccCCcceeec
Confidence 789999999999999997 56789999999999999999999888877544
No 6
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=3.7e-61 Score=495.95 Aligned_cols=374 Identities=17% Similarity=0.205 Sum_probs=285.7
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCcceeeecCCcccccccCCCceeecCCCCCC---eEEEEEe
Q 011046 9 PPKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPG---FYGAIDI 85 (495)
Q Consensus 9 ~~~~~~~~y~~R~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~d~~~~f~~~sn~~YLtG~~~~~---~~lvl~~ 85 (495)
+..|+.+||.+|++|+++.|+++ ++ |+++|+ ..+|++|||||.... ..+++++
T Consensus 3 ~~~f~~~E~~~Rl~rl~~~m~~~----~l--Dalli~------------------~~~ni~YltG~~~~~~~~~~~l~v~ 58 (391)
T TIGR02993 3 KLFFTRAEYQARLDKTRAAMEAR----GI--DLLIVT------------------DPSNMAWLTGYDGWSFYVHQCVLLP 58 (391)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHc----CC--CEEEEc------------------CcccceeeccCCCCceEEEEEEEEc
Confidence 46799999999999999999985 66 666544 356899999998543 2334557
Q ss_pred cCCeeEEecCCCCcccc---cccc--cCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCc
Q 011046 86 ATGKSILFAPRLPPDYA---VWLG--KIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSK 160 (495)
Q Consensus 86 ~~g~~~l~v~~~~~~~~---~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~ 160 (495)
.+|+++|+++..+.... .|.. .+..+.... .......+.+.+.+.|++.. ....+||+... . .+++
T Consensus 59 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~g--~~~~~ig~e~~----~-~~~~ 129 (391)
T TIGR02993 59 PEGEPIWYGRGQDANGAKRTAFMDHDNIVGYPDHY--VQSTERHPMDYLSEILQDRG--WDSLTIGVEMD----N-YYFS 129 (391)
T ss_pred CCCceEEEehhhhhhhHhheeeccccceeeccccc--ccCCCCCHHHHHHHHHHhcC--CCCCcEEEecC----C-CccC
Confidence 78999999987765422 2321 111111100 00000122344666665541 12447877422 1 1233
Q ss_pred hhhhhhhccc--cccccchHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc---C
Q 011046 161 PAQFEGMEKF--ETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMY---G 235 (495)
Q Consensus 161 ~~~~~~l~~~--~~~~~d~~~~i~~lR~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~---~ 235 (495)
...+..+... .++++|+++++.++|+|||++||++||+|++|++++++++.+.++||+||.||++.+.....+. .
T Consensus 130 ~~~~~~l~~~l~~~~~~d~~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~~~~ 209 (391)
T TIGR02993 130 AAAFASLQKHLPNARFVDATALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIRGVDGF 209 (391)
T ss_pred HHHHHHHHHhCCCCEEEehHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhcccCc
Confidence 4455555432 4678999999999999999999999999999999999999999999999999999886554321 2
Q ss_pred CCCCCCccceeeeCCCccccccCCCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHH
Q 011046 236 GCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHN 315 (495)
Q Consensus 236 G~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~ 315 (495)
|...++|.++++||.|++.+|+. |++++|++||+|++|+|+.|+|||+|+||||++ |+|+++|+++|+.++++|+
T Consensus 210 g~~~~~~~~iv~sG~~~a~pH~~----~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~v-G~p~~~~~~~~~~~~~a~~ 284 (391)
T TIGR02993 210 GGDYPAIVPLLPSGADASAPHLT----WDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFL-GKPTQAFLDAEKAVLEGME 284 (391)
T ss_pred CCCcCCcccccccCccccCCCCC----CCCCcccCCCEEEEEeeeecccCccceeEEEEc-CCCCHHHHHHHHHHHHHHH
Confidence 44456777899999999999964 589999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCC
Q 011046 316 AVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGL 395 (495)
Q Consensus 316 ~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~ 395 (495)
++++++|||++++||++++++++. +.|+ . ..|++|||||+++|+.+. +. +..
T Consensus 285 ~~i~~ikpG~~~~dv~~~~~~~~~----~~G~-------------~---~~h~~GhgiGl~~~~~~~-----e~---~~~ 336 (391)
T TIGR02993 285 AGLEAAKPGNTCEDIANAFFAVLK----KYGI-------------H---KDSRTGYPIGLSYPPDWG-----ER---TMS 336 (391)
T ss_pred HHHHHcCCCCcHHHHHHHHHHHHH----HcCC-------------c---cCCCceeeeccCcCCCCC-----Cc---ccc
Confidence 999999999999999999999874 4555 1 248999999999874210 00 112
Q ss_pred cCCCCCCccCCCCEEEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCCCCCCHHH
Q 011046 396 KSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISD 475 (495)
Q Consensus 396 ~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~~p~~~~~ 475 (495)
.+.+++.+|++||||++|||+|+ +|. |+||||+|+||++|+|+||.+|+++..
T Consensus 337 l~~~~~~~L~~GMv~tvEpgiy~--------------------------~~~-Gvried~v~VT~~G~e~Lt~~p~~l~~ 389 (391)
T TIGR02993 337 LRPGDNTVLKPGMTFHFMTGLWM--------------------------EDW-GLEITESILITETGVECLSSVPRKLFV 389 (391)
T ss_pred ccCCCCceecCCCEEEEcceeEe--------------------------CCC-CeEEeeEEEECCCcceecccCCcccEe
Confidence 23456789999999999999997 344 899999999999999999999998853
No 7
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=3.3e-60 Score=484.97 Aligned_cols=346 Identities=24% Similarity=0.334 Sum_probs=267.4
Q ss_pred HHHHHHHHHhhhhhccCCCCCCeEEEEeCCcceeeecCCcccccccCCCceeecCCCCCCeEEEEEecCCeeEEecCCCC
Q 011046 19 INREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSILFAPRLP 98 (495)
Q Consensus 19 ~R~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~d~~~~f~~~sn~~YLtG~~~~~~~lvl~~~~g~~~l~v~~~~ 98 (495)
+|+++|++.|.++ ++ |+++|. ...|++|||||......++| ..++ ..|+++.+.
T Consensus 2 ~Rl~~l~~~m~~~----~l--Da~lI~------------------~~~n~~YLTGf~g~~g~llI-t~~~-~~l~td~ry 55 (361)
T PRK09795 2 TLLASLRDWLKAQ----QL--DAVLLS------------------SRQNKQPHLGISTGSGYVVI-SRES-AHILVDSRY 55 (361)
T ss_pred cHHHHHHHHHHHC----CC--CEEEEC------------------CccccccccCccCCCeEEEE-ECCC-CEEEcCcch
Confidence 5899999999874 55 666554 34588999999976665555 4444 567776543
Q ss_pred ccc--ccccccCCChhHHHHHhcCceecc--hhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCchhhhhhhcc-cccc
Q 011046 99 PDY--AVWLGKIKPLSYFQEKYMVNMVYY--TDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEK-FETE 173 (495)
Q Consensus 99 ~~~--~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~l~~-~~~~ 173 (495)
... +.+. +.+.... .+.+.+.|.+.++..+.++|++... . ++...+..+.. +...
T Consensus 56 ~~qa~~~~~-------------~~~v~~~~~~~~~~~~L~~~L~~~~~~~Ig~e~~----~---~s~~~~~~L~~~l~~~ 115 (361)
T PRK09795 56 YADVEARAQ-------------GYQLHLLDATNTLTTIVNQIIADEQLQTLGFEGQ----Q---VSWETAHRWQSELNAK 115 (361)
T ss_pred HHHHHhhCC-------------CceEEEecCCccHHHHHHHHHHhcCCcEEEEecC----c---ccHHHHHHHHHhcCcc
Confidence 221 1111 0111110 1123334444433225578877432 1 22233333322 2234
Q ss_pred ccchHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCcc
Q 011046 174 LNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSA 253 (495)
Q Consensus 174 ~~d~~~~i~~lR~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~ 253 (495)
+++. .+..+|+|||++||++||+|++|++++++.+.+.++||+||.||++.++..+.++ |+...+|.+||+||.|++
T Consensus 116 ~~~~--~~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~-G~~~~~f~~iv~sG~~~~ 192 (361)
T PRK09795 116 LVSA--TPDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQ-GAEKASFDTIVASGWRGA 192 (361)
T ss_pred cccc--cHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHC-CCCcCCCCeEEEEecccc
Confidence 4444 3899999999999999999999999999999999999999999999999887766 778889999999999999
Q ss_pred ccccCCCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCC-CCHH---HHHHHHHHHHHHHHHHHHhCCCCCHHH
Q 011046 254 VLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGK-FTSD---QSLIYNAVLKAHNAVINAMKPGVCWVD 329 (495)
Q Consensus 254 ~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~-~~~~---~~~~~~~~~~a~~~~~~~ikpG~~~~d 329 (495)
.||+ .|++++|++||+|++|+|+.|+|||||+||||+++|+ ++++ ++++|+.++++|+++++++|||++++|
T Consensus 193 ~ph~----~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~ 268 (361)
T PRK09795 193 LPHG----KASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQ 268 (361)
T ss_pred ccCC----CCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH
Confidence 9995 4599999999999999999999999999999999544 3433 799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCE
Q 011046 330 MHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMV 409 (495)
Q Consensus 330 v~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv 409 (495)
|++++++++. +.|+ + .+|.|++||+|||++||.|.+. .+++.+|++|||
T Consensus 269 v~~~~~~~~~----~~g~-------------~-~~~~h~~GHgiGl~~he~p~i~-------------~~~~~~l~~gmv 317 (361)
T PRK09795 269 VDDAARRVIT----EAGY-------------G-DYFGHNTGHAIGIEVHEDPRFS-------------PRDTTTLQPGML 317 (361)
T ss_pred HHHHHHHHHH----HcCC-------------C-ccCCCCCCccCCccccCCCCcC-------------CCCCCCcCCCCE
Confidence 9999999974 4454 3 4789999999999999976432 345789999999
Q ss_pred EEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCCCCCCHH
Q 011046 410 ITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREIS 474 (495)
Q Consensus 410 ~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~~p~~~~ 474 (495)
|+||||+|+ +|.+|+||||||+||++|+|+||..|+++.
T Consensus 318 ~~iEpgiy~--------------------------~~~~gvriEd~v~vt~~G~e~Lt~~~~~l~ 356 (361)
T PRK09795 318 LTVEPGIYL--------------------------PGQGGVRIEDVVLVTPQGAEVLYAMPKTVL 356 (361)
T ss_pred EEECCEEEe--------------------------CCCCEEEEeeEEEECCCCcEeCcCCCceEE
Confidence 999999997 567799999999999999999999999874
No 8
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=8.3e-57 Score=465.15 Aligned_cols=358 Identities=16% Similarity=0.209 Sum_probs=268.9
Q ss_pred HHHHHHHHhhhhhccCCCCCCeEEEEeCCcceeeecCCcccccccCCCceeecCCCCCC--------eEEEEEecC-Cee
Q 011046 20 NREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPG--------FYGAIDIAT-GKS 90 (495)
Q Consensus 20 R~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~d~~~~f~~~sn~~YLtG~~~~~--------~~lvl~~~~-g~~ 90 (495)
-++|+++.|+++ ++ |++ |+. ..+||+|||||.... .++++++.+ ++|
T Consensus 12 ~~~rlr~~m~~~----gl--D~l-vl~-----------------~p~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p 67 (406)
T PRK14575 12 VSRKLRTIMERD----NI--DAV-IVT-----------------TCDNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIP 67 (406)
T ss_pred HHHHHHHHHHHc----CC--CEE-eec-----------------CcchheeecccccccceecccCCceEEEEEcCCCCC
Confidence 366778888774 77 544 442 467999999997433 123455766 456
Q ss_pred E-EecCCCCcccccc-----c-ccCCChhHHHHHh----------cCceecchh----HHHHHHHhcccCCCCCeEEEec
Q 011046 91 I-LFAPRLPPDYAVW-----L-GKIKPLSYFQEKY----------MVNMVYYTD----EIVGVLQGHYKEPGKPLLFLLH 149 (495)
Q Consensus 91 ~-l~v~~~~~~~~~~-----~-~~~~~~~~~~~~~----------~~d~~~~~~----~~~~~l~~~~~~~~~~~i~~~~ 149 (495)
+ +++|.++.....- . .++..+.+..... .-+...+.+ .+.+.|++.. ..+++||++.
T Consensus 68 ~~~i~p~~E~~~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~igve~ 145 (406)
T PRK14575 68 SLIIMNEFEAASLTLDMPNAELKTFPVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDAR--VLNKKIAIDL 145 (406)
T ss_pred ceEEechhhhhhhcccccccccccCCceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcC--CcCCEEEEcc
Confidence 6 7777776553211 1 0111111000000 000011123 3345554431 1467898743
Q ss_pred CCCCCCCCCCchhhhhhhccc--cccccchHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHH
Q 011046 150 GLNTDSNNFSKPAQFEGMEKF--ETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMF 227 (495)
Q Consensus 150 g~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~i~~lR~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~ 227 (495)
. . .+...+..+... ..+++|++..+.++|+|||++||++||+|+++++++++++++.++||+||.||++.+
T Consensus 146 ~----~---~~~~~~~~l~~~lp~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~ 218 (406)
T PRK14575 146 N----I---MSNGGKRVIDAVMPNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAY 218 (406)
T ss_pred C----C---CCHHHHHHHHHhCCCCeEEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHH
Confidence 2 1 233444444331 367899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCccceeeeCCCccccccCCCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHH
Q 011046 228 LHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIY 307 (495)
Q Consensus 228 ~~~~~~~~G~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~ 307 (495)
...+... |.....+.+++.+|.+ ..+|+ .|+++++++||+|++|+|+.|+|||+|+||||++ |+||++|+++|
T Consensus 219 ~~~~~~~-g~~~~~~~~~v~~G~~-~~~h~----~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~v-G~~~~~~~~~~ 291 (406)
T PRK14575 219 KAAVMSK-SETHFSRFHLISVGAD-FSPKL----IPSNTKACSGDLIKFDCGVDVDGYGADIARTFVV-GEPPEITRKIY 291 (406)
T ss_pred HHHHHHc-CCCcCCcCceEEECCC-cccCC----CCCCCcCCCCCEEEEEeceEECCEeeeeEEEEEC-CCCCHHHHHHH
Confidence 8887766 4444445578899988 46784 4699999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccC--cccccCCCCCC
Q 011046 308 NAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPGGYPK 385 (495)
Q Consensus 308 ~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iG--l~~he~~~~~~ 385 (495)
++++++|+++++++|||++++||++++++++. +.|+ . .++.|++|||+| +.+||.|.+.
T Consensus 292 ~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~----~~G~-------------~-~~~~~~~GHGiG~~lg~~e~P~i~- 352 (406)
T PRK14575 292 QTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIK----KSGL-------------P-NYNRGHLGHGNGVFLGLEESPFVS- 352 (406)
T ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH----HcCC-------------c-cccCCCCCCcccCCCCCccCCCCC-
Confidence 99999999999999999999999999999874 4555 2 367789999999 5889866432
Q ss_pred CCCCCCCCCCcCCCCCCccCCCCEEEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeee
Q 011046 386 GTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKN 465 (495)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~ 465 (495)
.+++.+|++||||++|||+|. +|.+|+||||||+||++|+|+
T Consensus 353 ------------~~~~~~Le~GMv~tiEpgiy~--------------------------~g~gGvriEDtvlVT~~G~e~ 394 (406)
T PRK14575 353 ------------THATESFTSGMVLSLETPYYG--------------------------YNLGSIMIEDMILINKEGIEF 394 (406)
T ss_pred ------------CCCCCCcCCCCEEEECCeeec--------------------------CCCcEEEEEeEEEEcCCCccc
Confidence 245689999999999999997 456799999999999999999
Q ss_pred CCCCCCCHH
Q 011046 466 MTSVPREIS 474 (495)
Q Consensus 466 LT~~p~~~~ 474 (495)
||.+|+++.
T Consensus 395 LT~~p~~l~ 403 (406)
T PRK14575 395 LSKLPRDLV 403 (406)
T ss_pred CCCCCcccc
Confidence 999999875
No 9
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=3.5e-55 Score=452.85 Aligned_cols=360 Identities=17% Similarity=0.170 Sum_probs=268.7
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCeEEEEeCCcceeeecCCcccccccCCCceeecCCCCCC-------e-EEEEEecC-C
Q 011046 18 FINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPG-------F-YGAIDIAT-G 88 (495)
Q Consensus 18 ~~R~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~d~~~~f~~~sn~~YLtG~~~~~-------~-~lvl~~~~-g 88 (495)
..-++|+++.|+++ ++ |+++|. .++||+|||||.... . ++++...+ +
T Consensus 10 ~~~~~r~r~~M~~~----gl--dalll~------------------~p~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~ 65 (405)
T PRK14576 10 EAVSRKARVVMERE----GI--DALVVT------------------VCDNFYYLTGFASFFMYTFRHTGAAVAIMFRDAN 65 (405)
T ss_pred HHHHHHHHHHHHHc----CC--CEEEec------------------cccceeeeccccccceeeeccCCeEEEEecCCCC
Confidence 34567888888875 67 555433 467999999998431 1 22222244 4
Q ss_pred ee-EEecCCCCccccc------ccccCCChhH-------HHHHh--c---Cceec-chhHHHHHHHhcccCCCCCeEEEe
Q 011046 89 KS-ILFAPRLPPDYAV------WLGKIKPLSY-------FQEKY--M---VNMVY-YTDEIVGVLQGHYKEPGKPLLFLL 148 (495)
Q Consensus 89 ~~-~l~v~~~~~~~~~------~~~~~~~~~~-------~~~~~--~---~d~~~-~~~~~~~~l~~~~~~~~~~~i~~~ 148 (495)
+| .++++.++..... |......+.+ +.... . -+... ..+.+.+.|++.. ..+++|++.
T Consensus 66 ~p~~~i~~~~e~~~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~rigve 143 (405)
T PRK14576 66 IPSQIIMNEFEAASTHFDMPNSVLKTFPVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLVKNALEDAG--VLDKTIAIE 143 (405)
T ss_pred CCcEEEechhhhhhhhccccccccccCCceEeecCCcccchhhhccccCCCCcHHHHHHHHHHHHHHhC--CCCCEEEEc
Confidence 55 6677776544321 1111111111 00000 0 00000 1134555665542 146789774
Q ss_pred cCCCCCCCCCCchhhhhhhcc--ccccccchHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHH
Q 011046 149 HGLNTDSNNFSKPAQFEGMEK--FETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESM 226 (495)
Q Consensus 149 ~g~~~~~~~~~~~~~~~~l~~--~~~~~~d~~~~i~~lR~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~ 226 (495)
.. . ++...+..+.. .+..++|++.++.++|+|||++||++||+|++++++++..+++.++||+||.||++.
T Consensus 144 ~~----~---~~~~~~~~l~~~~~~~~~vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~ 216 (405)
T PRK14576 144 LQ----A---MSNGGKGVLDKVAPGLKLVDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAA 216 (405)
T ss_pred cC----C---CCHHHHHHHHhhCCCCeEEEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHH
Confidence 32 1 22333333422 136789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCccceeeeCCCccccccCCCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHH
Q 011046 227 FLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLI 306 (495)
Q Consensus 227 ~~~~~~~~~G~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~ 306 (495)
+...+... |....++.+++++|+++ .+|+. |+++++++||+|++|+|+.|+||++|+||||++ |+|+++|+++
T Consensus 217 ~~~~~~~~-g~~~~~~~~~v~~G~~~-~~h~~----~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~-G~p~~~~~~~ 289 (405)
T PRK14576 217 FKAAVMSF-PETNFSRFNLISVGDNF-SPKII----ADTTPAKVGDLIKFDCGIDVAGYGADLARTFVL-GEPDKLTQQI 289 (405)
T ss_pred HHHHHHHc-CCCcCCCCCEEEECCcc-cCCCC----CCCcccCCCCEEEEEeceeECCEEeeeeEEEEC-CCCCHHHHHH
Confidence 98888766 53334445799999994 57844 589999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccC--cccccCCCCC
Q 011046 307 YNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPGGYP 384 (495)
Q Consensus 307 ~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iG--l~~he~~~~~ 384 (495)
|++++++++++++++|||++++||+.++++++. +.|+ . .++.|++|||+| +.+||.|.+
T Consensus 290 ~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~----~~G~-------------~-~~~~~~~GHgiG~~l~~~e~P~i- 350 (405)
T PRK14576 290 YDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIK----TSGL-------------P-HYNRGHLGHGDGVFLGLEEVPFV- 350 (405)
T ss_pred HHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH----HcCC-------------c-cccCCCCCCCCCCCCCcCcCCCc-
Confidence 999999999999999999999999999999874 4555 2 367789999999 888986643
Q ss_pred CCCCCCCCCCCcCCCCCCccCCCCEEEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCee
Q 011046 385 KGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSK 464 (495)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e 464 (495)
..+++.+|++||||++||++|. .|.+|+||||||+||++|+|
T Consensus 351 ------------~~~~~~~Le~GMv~~vEp~~y~--------------------------~g~ggvriEDtvlVTe~G~e 392 (405)
T PRK14576 351 ------------STQATETFCPGMVLSLETPYYG--------------------------IGVGSIMLEDMILITDSGFE 392 (405)
T ss_pred ------------CCCCCCccCCCCEEEECCceee--------------------------cCCCEEEEeeEEEECCCccc
Confidence 2245689999999999999997 46789999999999999999
Q ss_pred eCCCCCCCHH
Q 011046 465 NMTSVPREIS 474 (495)
Q Consensus 465 ~LT~~p~~~~ 474 (495)
+||.+|+++.
T Consensus 393 ~LT~~p~~l~ 402 (405)
T PRK14576 393 FLSKLDRDLR 402 (405)
T ss_pred cCCCCCcccc
Confidence 9999999874
No 10
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=2.5e-51 Score=411.57 Aligned_cols=274 Identities=20% Similarity=0.298 Sum_probs=227.9
Q ss_pred HHHHHHhcccCCCCCeEEEecCCCCCCCCCCchhhhhhhccc--cccccchHHHHHHhhhcCCHHHHHHHHHHHHHHHHH
Q 011046 129 IVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKF--ETELNTLHPILSECRVFKSDHELALIQFANDISSEA 206 (495)
Q Consensus 129 ~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~l~~~--~~~~~d~~~~i~~lR~vKs~~EI~~~r~Aa~i~~~a 206 (495)
+.+.|.++. ...++||++.+ +++...+..++.. ..+++|++.++.++|+|||++||+.||+|+++++++
T Consensus 44 l~~~l~~~g--~~~~rigve~~-------~~~~~~~~~l~~~l~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~i~~~~ 114 (323)
T PRK15173 44 LKDALNDAR--VLNKKIAIDLN-------IMSNGGKRVIDAVMPNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYG 114 (323)
T ss_pred HHHHHHHcC--ccCCEEEEecC-------ccCHHHHHHHHhhCCCCeEEEhHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 445454442 13578987432 1234445555432 367899999999999999999999999999999999
Q ss_pred HHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccccccCCCCCCCCCccCCCCeEEEEeCeEECceE
Q 011046 207 HVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYG 286 (495)
Q Consensus 207 ~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~ 286 (495)
+..+++.++||+||.|+++.+...+.+. |.....+.+++++|.++ .+|+ .|+++++++||+|++|+|+.|+|||
T Consensus 115 ~~~~~~~i~~G~tE~el~a~~~~~~~~~-g~~~~~~~~~i~~G~~~-~~h~----~~~~~~l~~Gd~V~iD~g~~~~GY~ 188 (323)
T PRK15173 115 ITEASKLIRVGCTSAELTAAYKAAVMSK-SETHFSRFHLISVGADF-SPKL----IPSNTKACSGDLIKFDCGVDVDGYG 188 (323)
T ss_pred HHHHHHHccCCCCHHHHHHHHHHHHHHc-CCCCCCCCcEEEECCCC-ccCC----CCCCCccCCCCEEEEEeCccCCCEe
Confidence 9999999999999999999998887765 54445555788889884 5784 4589999999999999999999999
Q ss_pred eeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccc
Q 011046 287 SDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMP 366 (495)
Q Consensus 287 sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~ 366 (495)
+|+||||++ |+|+++|+++|+.++++++++++++|||++++||+++++++++ +.|+ . .++.
T Consensus 189 aDitRT~~v-G~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~----~~G~-------------~-~~~~ 249 (323)
T PRK15173 189 ADIARTFVV-GEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIK----KSGL-------------P-NYNR 249 (323)
T ss_pred eeeEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH----HcCC-------------c-cccC
Confidence 999999999 9999999999999999999999999999999999999999874 4555 2 3677
Q ss_pred cccccccCc--ccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCccccccccccccccccccccccchhhhccc
Q 011046 367 HGLGHFLGI--DTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRF 444 (495)
Q Consensus 367 h~~GH~iGl--~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (495)
|++|||||+ .+||.|.+. ..++.+|++||||+||||+|.
T Consensus 250 ~~~GHGiG~~lg~~E~P~i~-------------~~~~~~Le~GMV~tiEPgiy~-------------------------- 290 (323)
T PRK15173 250 GHLGHGNGVFLGLEESPFVS-------------THATESFTSGMVLSLETPYYG-------------------------- 290 (323)
T ss_pred CCCCCcCCCCCCcCCCCCCC-------------CCCCCccCCCCEEEECCEEEc--------------------------
Confidence 889999995 889866432 235689999999999999996
Q ss_pred CCcceeEEceEEEEecCCeeeCCCCCCCHHH
Q 011046 445 KDFGGVRIESDVLVTANGSKNMTSVPREISD 475 (495)
Q Consensus 445 ~g~~gvrieD~vlVte~G~e~LT~~p~~~~~ 475 (495)
+|.+|+||||||+||++|+|+||..|+++..
T Consensus 291 ~g~ggvriEDtvlVTe~G~e~LT~~p~~l~~ 321 (323)
T PRK15173 291 YNLGSIMIEDMILINKEGIEFLSKLPRDLVS 321 (323)
T ss_pred CCCcEEEEeeEEEEcCCcceeCCCCCcccee
Confidence 4567999999999999999999999998753
No 11
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=3e-49 Score=383.57 Aligned_cols=241 Identities=20% Similarity=0.209 Sum_probs=202.7
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC-----CCCccceeeeCCCccccccCCC
Q 011046 186 VFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYGHA 260 (495)
Q Consensus 186 ~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~-----~~~~~~iv~sG~~~~~~h~~~~ 260 (495)
.|||++||++||+|++|++++++++++.++||+||.||++.+...+.++ |+. ..+|++++.+|.|+.++|+.
T Consensus 3 ~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~-G~~~~~~~~~~~~~~i~~g~n~~~~H~~-- 79 (248)
T PRK12897 3 TIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKH-GATSEQKGYNGYPYAICASVNDEMCHAF-- 79 (248)
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHc-CCcccccccCCCCcceEeccCCEeecCC--
Confidence 6999999999999999999999999999999999999999999888776 554 34777788899999999965
Q ss_pred CCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011046 261 AAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 340 (495)
Q Consensus 261 ~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~ 340 (495)
|++++|++||+|++|+|+.|+||++|++|||++ |+++++|+++|++++++++++++++|||++++||+.+++++++
T Consensus 80 --p~~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~v-G~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~- 155 (248)
T PRK12897 80 --PADVPLTEGDIVTIDMVVNLNGGLSDSAWTYRV-GKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVA- 155 (248)
T ss_pred --CCCcccCCCCEEEEEeeEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHH-
Confidence 489999999999999999999999999999999 9999999999999999999999999999999999999998864
Q ss_pred HHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcccccc
Q 011046 341 SLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFID 420 (495)
Q Consensus 341 ~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~ 420 (495)
+.|+ . .+.|.+||+||+++||.|.+.. +....++.+|++||||++|||+|+..
T Consensus 156 ---~~g~-------------~--~~~~~~GHgiGl~~hE~P~i~~---------~~~~~~~~~l~~Gmv~tiEP~~~~~~ 208 (248)
T PRK12897 156 ---NEGF-------------S--VARDFTGHGIGKEIHEEPAIFH---------FGKQGQGPELQEGMVITIEPIVNVGM 208 (248)
T ss_pred ---HcCC-------------c--cCCCeEECccCCcccCCCccCC---------CCCCCCCCCcCCCCEEEECCeEecCC
Confidence 4555 2 3478899999999999764421 11234567899999999999999643
Q ss_pred ccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCCC
Q 011046 421 ALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSV 469 (495)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~~ 469 (495)
.....+ .++|+.. ..+|.+|+|+||||+||++|+|+||.+
T Consensus 209 ~~~~~~-~~~~~~~--------~~~g~~g~r~edtv~Vt~~G~e~lt~~ 248 (248)
T PRK12897 209 RYSKVD-LNGWTAR--------TMDGKLSAQYEHTIAITKDGPIILTKL 248 (248)
T ss_pred CceEEC-CCCcEEE--------cCCCCeEeecceEEEEeCCccEEeecC
Confidence 221111 1223211 126778999999999999999999963
No 12
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=3.3e-49 Score=387.35 Aligned_cols=246 Identities=20% Similarity=0.210 Sum_probs=206.1
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCC---------CCCCccceeeeCCCcccc
Q 011046 185 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGC---------RHCSYTCICATGENSAVL 255 (495)
Q Consensus 185 R~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~---------~~~~~~~iv~sG~~~~~~ 255 (495)
..|||++||++||+|++|++++++++++.++||+||.||++.+++.+.+. |+ ...+|++++++|.|++++
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~-g~~~~~~G~~~~~~~f~~~v~~G~n~~~~ 80 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEE-NVLPLQIGVDGAMMDYPYATCCGLNDEVA 80 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHc-CCcccccCCCCcccCCCcceEEecccccc
Confidence 46999999999999999999999999999999999999999998887765 32 235788999999999999
Q ss_pred ccCCCCCCCCCccCCCCeEEEEeCe---------------------------EECceEeeeeeEEEeCCCCCHHHHHHHH
Q 011046 256 HYGHAAAPNDRTFEDGDMALLDMGA---------------------------EYQFYGSDITCSFPVNGKFTSDQSLIYN 308 (495)
Q Consensus 256 h~~~~~~p~~~~l~~Gd~v~iD~g~---------------------------~~~gY~sd~tRT~~v~G~~~~~~~~~~~ 308 (495)
|+ .|++++|++||+|++|+|+ .|+||++|++|||++ |+++++|+++|+
T Consensus 81 H~----~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~v-G~~~~~~~~l~~ 155 (286)
T PRK07281 81 HA----FPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAV-GTPSDEVKNLMD 155 (286)
T ss_pred CC----CCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEEC-CCCCHHHHHHHH
Confidence 95 4599999999999999997 489999999999988 999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCC
Q 011046 309 AVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTE 388 (495)
Q Consensus 309 ~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~ 388 (495)
+++++|+++++.+|||++++||++++++++. +.|+ + .+.|.+|||||+++||.|.++
T Consensus 156 ~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~----~~G~-------------~--~~~~~~GHGIGl~~hE~P~i~---- 212 (286)
T PRK07281 156 VTKEAMYRGIEQAVVGNRIGDIGAAIQEYAE----SRGY-------------G--VVRDLVGHGVGPTMHEEPMVP---- 212 (286)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH----HcCC-------------c--cCCCeeeeeCCCccCCCCcCC----
Confidence 9999999999999999999999999999874 4555 3 257889999999999976432
Q ss_pred CCCCCCCcCCCCCCccCCCCEEEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCC
Q 011046 389 RSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 468 (495)
Q Consensus 389 ~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~ 468 (495)
.+....++.+|++||||+|||++|+....+.....|+|+... .+|.+|+|+||||+||++|+|+||.
T Consensus 213 -----~~~~~~~~~~Le~GMV~tiEPgiy~~~~~~~~~~~~gw~~~~--------~~g~~gvr~EdtvlVT~~G~e~LT~ 279 (286)
T PRK07281 213 -----NYGTAGRGLRLREGMVLTIEPMINTGTWEIDTDMKTGWAHKT--------LDGGLSCQYEHQFVITKDGPVILTS 279 (286)
T ss_pred -----CcccCCCCCEECCCCEEEECCeeEcCCcceecccCCCceEEe--------cCCCcEEEeccEEEEeCCcceECCC
Confidence 111234568899999999999999843222222334443211 2466699999999999999999998
Q ss_pred CCCC
Q 011046 469 VPRE 472 (495)
Q Consensus 469 ~p~~ 472 (495)
.+++
T Consensus 280 ~~~~ 283 (286)
T PRK07281 280 QGEE 283 (286)
T ss_pred CCcc
Confidence 7765
No 13
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=3.9e-48 Score=382.09 Aligned_cols=251 Identities=19% Similarity=0.231 Sum_probs=204.0
Q ss_pred HHHHHHhhh-cCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC-------CCCccceeeeC
Q 011046 178 HPILSECRV-FKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-------HCSYTCICATG 249 (495)
Q Consensus 178 ~~~i~~lR~-vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~-------~~~~~~iv~sG 249 (495)
...++++|. |||++||+.||+|++|++++++++++.++||+||.||++.+...+... |.. ..+|++++.+|
T Consensus 33 ~~~~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~-G~~~~~~~~~~~~f~~~v~~g 111 (291)
T PRK12318 33 QLYASQYDIIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEY-NAIPAPLNYGSPPFPKTICTS 111 (291)
T ss_pred hhccCCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHc-CCCccccccCCCCCCcceEee
Confidence 344555666 999999999999999999999999999999999999998887666554 432 24688889999
Q ss_pred CCccccccCCCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHH
Q 011046 250 ENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVD 329 (495)
Q Consensus 250 ~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~d 329 (495)
.|+.++|+. |++++|++||+|++|+|+.|+||++|++|||++ |+++++|+++|++++++++++++++|||++++|
T Consensus 112 ~n~~~~H~~----p~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~v-G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~d 186 (291)
T PRK12318 112 LNEVICHGI----PNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMI-GEVSEIKKKVCQASLECLNAAIAILKPGIPLYE 186 (291)
T ss_pred ccceeecCC----CCCCccCCCCEEEEEEeEEECcEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHH
Confidence 999999964 589999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCE
Q 011046 330 MHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMV 409 (495)
Q Consensus 330 v~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv 409 (495)
|++++++++. +.|+ . ...|.+||+|||++||.|.++. . ...++.+|++|||
T Consensus 187 v~~a~~~~~~----~~G~-------------~--~~~~~~GHgIGl~~hE~P~i~~---------~-~~~~~~~L~~GMV 237 (291)
T PRK12318 187 IGEVIENCAD----KYGF-------------S--VVDQFVGHGVGIKFHENPYVPH---------H-RNSSKIPLAPGMI 237 (291)
T ss_pred HHHHHHHHHH----HcCC-------------c--cCCCcccCCcCccccCCCcccC---------c-CCCCCCEeCCCCE
Confidence 9999999874 4555 1 2347799999999999774431 0 1234578999999
Q ss_pred EEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCCCCC
Q 011046 410 ITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPR 471 (495)
Q Consensus 410 ~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~~p~ 471 (495)
|+|||++|......-....+.|+.... .|..++++||||+||++|+|+||.+|+
T Consensus 238 ~~iEP~i~~~~~~g~~~~~~~~~~~~~--------~g~~~~~~edtv~VTe~G~e~LT~~~~ 291 (291)
T PRK12318 238 FTIEPMINVGKKEGVIDPINHWEARTC--------DNQPSAQWEHTILITETGYEILTLLDK 291 (291)
T ss_pred EEECCEEEcCCCceEEecCCCcEEEec--------CCCeeeeeeeEEEEcCCcceeCCCCCC
Confidence 999999997421110011122222111 345588899999999999999999885
No 14
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=1.4e-47 Score=371.21 Aligned_cols=243 Identities=51% Similarity=0.814 Sum_probs=208.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccccccCCCCCCCCCccCCCC
Q 011046 193 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGD 272 (495)
Q Consensus 193 I~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd 272 (495)
|++||+|+++++++++++++.++||+||.||++.+...+.+. |+. .+|++++++|.|+..+|+. |++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~-G~~-~~~~~~v~~g~~~~~~H~~----~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSR-GAR-LAYSYIVAAGSNAAILHYV----HNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHc-CCC-cCCCCeEEECCCccccCCC----cCCCcCCCCC
Confidence 579999999999999999999999999999999999888776 555 6788999999999999965 4899999999
Q ss_pred eEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCCh
Q 011046 273 MALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNV 352 (495)
Q Consensus 273 ~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~ 352 (495)
+|++|+|+.|+||++|++|||+++|+++++|+++|++++++++++++.+|||++++||++++++++.+.+.+.|+.++.+
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~ 154 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDV 154 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCch
Confidence 99999999999999999999998679999999999999999999999999999999999999999998878888876544
Q ss_pred HHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcccccccccccccccccc
Q 011046 353 DEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENEST 432 (495)
Q Consensus 353 ~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~~~~~~~ 432 (495)
+++...+....+++|++||+||+++||.|.+. ...+++.+|++||||++|||+|++....+
T Consensus 155 ~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~~~-----------~~~~~~~~l~~GMv~~iEp~iy~~~~~~~-------- 215 (243)
T cd01087 155 DEIVESGAYAKFFPHGLGHYLGLDVHDVGGYL-----------RYLRRARPLEPGMVITIEPGIYFIPDLLD-------- 215 (243)
T ss_pred HhhhhhhhhhhhcCCCCccccCcccccCcccc-----------ccCCCCCCCCCCCEEEECCEEEeCCcccc--------
Confidence 44444444456899999999999999966431 02245689999999999999998542111
Q ss_pred ccccchhhhcccCCcceeEEceEEEEecCCeeeCCC
Q 011046 433 SKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 468 (495)
Q Consensus 433 ~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~ 468 (495)
.++. .+.+|+|+||||+||++|+|+||+
T Consensus 216 -------~~~~-~~~~g~~ied~v~Vt~~G~e~Lt~ 243 (243)
T cd01087 216 -------VPEY-FRGGGIRIEDDVLVTEDGPENLTR 243 (243)
T ss_pred -------cccc-cceeEEEeeeEEEEcCCcceeCcC
Confidence 1111 245699999999999999999984
No 15
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=6.3e-47 Score=368.78 Aligned_cols=245 Identities=21% Similarity=0.239 Sum_probs=204.9
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC-----CCCccceeeeCCCccccccCC
Q 011046 185 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYGH 259 (495)
Q Consensus 185 R~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~-----~~~~~~iv~sG~~~~~~h~~~ 259 (495)
-.|||++||++||+|++|++++++++++.++||+||.|+++.+...+.+. |.. ...|++++.+|.|+..+|+.
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~-G~~~~~~~~~~~~~~~~~g~~~~~~h~~- 80 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQ-GAIPAPLGYHGFPKSICTSVNEVVCHGI- 80 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHC-CCEecccCCCCCCcCeEecccceeecCC-
Confidence 46999999999999999999999999999999999999999998887776 442 24567788899999999964
Q ss_pred CCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011046 260 AAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 339 (495)
Q Consensus 260 ~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~ 339 (495)
|++++|++||+|++|+|+.|+||++|++||+++ |+++++|+++|+.++++++++++++|||++++||++++++++.
T Consensus 81 ---~~~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~v-G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~ 156 (252)
T PRK05716 81 ---PSDKVLKEGDIVNIDVTVIKDGYHGDTSRTFGV-GEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAE 156 (252)
T ss_pred ---CCCcccCCCCEEEEEEEEEECCEEEEeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999 9999999999999999999999999999999999999999864
Q ss_pred HHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCccccc
Q 011046 340 ESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFI 419 (495)
Q Consensus 340 ~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~ 419 (495)
+.|+ . ...|.+||+||+.+||.|.++ .+....++.+|++||||++||++|+.
T Consensus 157 ----~~g~-------------~--~~~~~~GHgiG~~~~e~p~~~---------~~~~~~~~~~le~Gmv~~vEp~i~~~ 208 (252)
T PRK05716 157 ----AEGF-------------S--VVREYCGHGIGRKFHEEPQIP---------HYGAPGDGPVLKEGMVFTIEPMINAG 208 (252)
T ss_pred ----HcCC-------------e--eecCccccccCCccCCCCccC---------cCCCCCCCCEecCCCEEEEccEEEcC
Confidence 4555 1 235679999999999976432 11234567899999999999999974
Q ss_pred cccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCCCCCC
Q 011046 420 DALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPRE 472 (495)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~~p~~ 472 (495)
...+. .+.++|+..+. +|.+|+||||||+||++|+|+||..|++
T Consensus 209 ~~~~~-~~~~~~~~~~~--------~g~~g~~~ed~v~Vt~~G~e~Lt~~~~~ 252 (252)
T PRK05716 209 KREVK-TLKDGWTVVTK--------DGSLSAQYEHTVAVTEDGPEILTLRPEE 252 (252)
T ss_pred CCceE-EcCCCCEEEcc--------CCCcEEeeeeEEEEcCCccEEeeCCCCC
Confidence 32221 12233322111 4667999999999999999999998875
No 16
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=6.3e-47 Score=367.60 Aligned_cols=240 Identities=21% Similarity=0.284 Sum_probs=198.8
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC-----CCCccceeeeCCCccccccCCC
Q 011046 186 VFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYGHA 260 (495)
Q Consensus 186 ~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~-----~~~~~~iv~sG~~~~~~h~~~~ 260 (495)
.|||++||++||+|++|++++++.+++.++||+||.||++.+.+.+.+. |+. ..+|++++.+|.|+.++|+.
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~n~~~~H~~-- 78 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKH-GAKPAFLGYYGFPGSVCISVNEVVIHGI-- 78 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHC-CCCccccCCCCCCceeEeccccEEEecC--
Confidence 6899999999999999999999999999999999999999998887766 543 23567788889999999965
Q ss_pred CCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011046 261 AAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 340 (495)
Q Consensus 261 ~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~ 340 (495)
|++++|++||+|++|+|+.|+||++|++|||++ |+|+++|+++|++++++++++++.+|||++++||++++++++.
T Consensus 79 --~~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~- 154 (247)
T TIGR00500 79 --PDKKVLKDGDIVNIDVGVIYDGYHGDTAKTFLV-GKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAE- 154 (247)
T ss_pred --CCCcccCCCCEEEEEEEEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-
Confidence 489999999999999999999999999999999 8999999999999999999999999999999999999999864
Q ss_pred HHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcccccc
Q 011046 341 SLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFID 420 (495)
Q Consensus 341 ~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~ 420 (495)
+.|+ . .+.|.+||+||+++||.|.++ .+....++.+|++||||+|||++|+..
T Consensus 155 ---~~g~-------------~--~~~~~~GHgiG~~~~e~p~i~---------~~~~~~~~~~l~~gmv~~iEp~i~~~~ 207 (247)
T TIGR00500 155 ---AKGF-------------S--VVREYCGHGIGRKFHEEPQIP---------NYGKKFTNVRLKEGMVFTIEPMVNTGT 207 (247)
T ss_pred ---HcCC-------------E--eccCccCCccCcccCCCCccC---------CcCcCCCCCEecCCCEEEEeeEEEcCC
Confidence 4565 1 235678999999999976432 111224578999999999999999853
Q ss_pred ccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCC
Q 011046 421 ALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 468 (495)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~ 468 (495)
..+..+ .++|.. .. ..|.+|+||||||+||++|+|+||.
T Consensus 208 ~~~~~~-~~~~~~-------~~-~~~~~g~ried~v~Vt~~G~e~Lt~ 246 (247)
T TIGR00500 208 EEITTA-ADGWTV-------KT-KDGSLSAQFEHTIVITDNGPEILTE 246 (247)
T ss_pred CcEEEC-CCCCEE-------Ec-cCCCeEEEEeEEEEEcCCccEEccC
Confidence 211111 111111 11 1356799999999999999999984
No 17
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.1e-46 Score=382.84 Aligned_cols=252 Identities=19% Similarity=0.253 Sum_probs=209.3
Q ss_pred HHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC----CCCccceeeeCCCccccc
Q 011046 181 LSECRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR----HCSYTCICATGENSAVLH 256 (495)
Q Consensus 181 i~~lR~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~----~~~~~~iv~sG~~~~~~h 256 (495)
+...|+|||++||+.||+|++++.++++.+++.++||+||.||++.+...+.++++.. +..|+.++.+|.|..++|
T Consensus 131 ~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~H 210 (396)
T PLN03158 131 LQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICH 210 (396)
T ss_pred cccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeecccccccC
Confidence 4466999999999999999999999999999999999999999999998888774321 235777888999999999
Q ss_pred cCCCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 011046 257 YGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEK 336 (495)
Q Consensus 257 ~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~ 336 (495)
+.|++++|++||+|++|+|+.++||++|++|||+| |+++++|+++|++++++++++++++|||++++||++++++
T Consensus 211 ----gip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~V-G~~~~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~ 285 (396)
T PLN03158 211 ----GIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFV-GNVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINR 285 (396)
T ss_pred ----CCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 45699999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcc
Q 011046 337 IILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGC 416 (495)
Q Consensus 337 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~ 416 (495)
++. +.|+ . .+.|.+|||||+.+||.|.++ .+...+...+|++||||||||++
T Consensus 286 ~~~----~~G~-------------~--~v~~~~GHGIG~~~He~P~i~---------~~~~~~~~~~l~~GMVfTIEP~i 337 (396)
T PLN03158 286 HAT----MSGL-------------S--VVKSYCGHGIGELFHCAPNIP---------HYARNKAVGVMKAGQVFTIEPMI 337 (396)
T ss_pred HHH----HcCC-------------C--ccCCccCCccccccCCCCCCC---------cccCCCCCCEecCCcEEEECCee
Confidence 864 5565 1 345778999999999976443 11112234789999999999999
Q ss_pred ccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCC-CCCCCHH
Q 011046 417 YFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPREIS 474 (495)
Q Consensus 417 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT-~~p~~~~ 474 (495)
|.... ....+.|+|+.... .|.+++|+|||||||++|+|+|| ..|+...
T Consensus 338 ~~g~~-~~~~~~d~wt~~t~--------dG~~~aq~E~tvlVTe~G~EiLT~~~~~~~~ 387 (396)
T PLN03158 338 NAGVW-RDRMWPDGWTAVTA--------DGKRSAQFEHTLLVTETGVEVLTARLPSSPD 387 (396)
T ss_pred ccCcc-cceecCCCceEEec--------CCceeeEeeeEEEEeCCcceECCCCCCCCcc
Confidence 97321 11223345543321 46668999999999999999999 6777654
No 18
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=1.8e-46 Score=358.96 Aligned_cols=222 Identities=19% Similarity=0.252 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCc------cceeeeCCCccccccCCCCCCCCC
Q 011046 193 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSY------TCICATGENSAVLHYGHAAAPNDR 266 (495)
Q Consensus 193 I~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~------~~iv~sG~~~~~~h~~~~~~p~~~ 266 (495)
|++||+|++|++++++++++.++||+||.||++.+.+.+.+. |+....+ .+++++|.|++.+|+. |+++
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~-ga~~~~~~~~~~~~~~v~~G~~~~~~H~~----~~~r 75 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVRE-IAKTFPEVELMDTWTWFQSGINTDGAHNP----VTNR 75 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCccCCcccccCcceEEEeeccccccCCC----CCCc
Confidence 679999999999999999999999999999999998887776 4333322 2578999999999954 5899
Q ss_pred ccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCC
Q 011046 267 TFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGG 346 (495)
Q Consensus 267 ~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G 346 (495)
+|++||+|++|+|+.++||++|++|||++ |+|+++|+++|++++++|+++++++|||++++||++++++++ ++.|
T Consensus 76 ~l~~GD~v~~d~g~~~~GY~ad~~RT~~v-G~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~----~~~G 150 (228)
T cd01090 76 KVQRGDILSLNCFPMIAGYYTALERTLFL-DEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMY----REHD 150 (228)
T ss_pred ccCCCCEEEEEEeEEECCEeeeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH----HHcC
Confidence 99999999999999999999999999998 999999999999999999999999999999999999999987 4556
Q ss_pred CccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcccccccccccc
Q 011046 347 VMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPA 426 (495)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~ 426 (495)
+ . .++.|++||+||+.+||.|... + + .....++.+|+|||||+|||++|.+..
T Consensus 151 ~-------------~-~~~~~~~GHgiGl~~he~~~~~-g---~----~~~~~~~~~Le~GMV~~iEP~i~~~~~----- 203 (228)
T cd01090 151 L-------------L-RYRTFGYGHSFGVLSHYYGREA-G---L----ELREDIDTVLEPGMVVSMEPMIMLPEG----- 203 (228)
T ss_pred C-------------C-cccccccCcccccccccCCCcc-c---c----ccCCCCCCccCCCCEEEECCEEeeccc-----
Confidence 5 2 3678999999999999965211 0 0 112345689999999999999997320
Q ss_pred ccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCC
Q 011046 427 MENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 468 (495)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~ 468 (495)
.+|.+|+|+||||+||++|+|+||.
T Consensus 204 -----------------~~g~gG~ried~v~Vt~~G~e~Lt~ 228 (228)
T cd01090 204 -----------------QPGAGGYREHDILVINENGAENITG 228 (228)
T ss_pred -----------------CCCCcEEEeeeEEEECCCccccCcC
Confidence 1367899999999999999999984
No 19
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=9.9e-46 Score=360.98 Aligned_cols=243 Identities=21% Similarity=0.194 Sum_probs=201.6
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC-----CCCccceeeeCCCccccccC
Q 011046 184 CRVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYG 258 (495)
Q Consensus 184 lR~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~-----~~~~~~iv~sG~~~~~~h~~ 258 (495)
+++|||++||++||+|+++++++++++++.++||+||.||++.+.+.+.+. |+. ...|++++.+|.|...+|+.
T Consensus 7 ~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 7 GMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEH-GAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred ceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHC-CCEeCcccCCCCCcceEecCCCeeEecC
Confidence 457999999999999999999999999999999999999999998887766 543 24577777888999999954
Q ss_pred CCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011046 259 HAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII 338 (495)
Q Consensus 259 ~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~ 338 (495)
|++++|++||+|++|+|+.|+||++|++|||++ |+++++|+++|++++++++++++++|||++++||++++++++
T Consensus 86 ----p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~ 160 (255)
T PRK12896 86 ----PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAV-GPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFA 160 (255)
T ss_pred ----CCCccCCCCCEEEEEEeEEECcEEEeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 588999999999999999999999999999999 999999999999999999999999999999999999999986
Q ss_pred HHHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcccc
Q 011046 339 LESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF 418 (495)
Q Consensus 339 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~ 418 (495)
. +.|+ ..+.|.+||+||+.+||.|.... ......++.+|++||||+|||++|.
T Consensus 161 ~----~~G~---------------~~~~~~~GHgiG~~~he~p~~~~--------~~~~~~~~~~le~GmV~~iEp~i~~ 213 (255)
T PRK12896 161 K----KNGY---------------SVVRDLTGHGVGRSLHEEPSVIL--------TYTDPLPNRLLRPGMTLAVEPFLNL 213 (255)
T ss_pred H----HcCC---------------EeccCcccCCcCcccccCCCccc--------cCCCCCCCCEecCCcEEEEeceEEc
Confidence 4 4555 13568899999999999763321 0112245689999999999999986
Q ss_pred ccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCC
Q 011046 419 IDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 468 (495)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~ 468 (495)
....+..+ .+.|+... -+|.+|+|+||||+||++|+|+||.
T Consensus 214 g~~~~~~~-~~~~~~~~--------~~~~~~~~~edtv~vt~~G~e~Lt~ 254 (255)
T PRK12896 214 GAKDAETL-DDGWTVVT--------PDKSLSAQFEHTVVVTRDGPEILTD 254 (255)
T ss_pred CCCceEEc-CCCCEEEe--------cCCCeEEEEEEEEEEcCCcceecCC
Confidence 43322222 23333211 1467799999999999999999994
No 20
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=5.1e-44 Score=344.07 Aligned_cols=225 Identities=18% Similarity=0.204 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH-----HccCC--CCHHHHHHHHHHHHHHcCCCC---------CCCccceeeeCCCc-ccc
Q 011046 193 LALIQFANDISSEAHVEVMK-----KTRVG--MKEYQMESMFLHHTYMYGGCR---------HCSYTCICATGENS-AVL 255 (495)
Q Consensus 193 I~~~r~Aa~i~~~a~~~~~~-----~i~~G--~tE~el~a~~~~~~~~~~G~~---------~~~~~~iv~sG~~~-~~~ 255 (495)
+++||+|+++++.+|+..+. .|.+| +||.+|+..++..+... +.. +++|+|||+||.|+ .++
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~-~~~~~~~~~~~~~~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDK-KKYKAKLDPEQLDWCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCc-hhhhcCCCHHHcCcccCCeEeECcCcccCC
Confidence 46899999999999986665 88999 99999999999888765 333 68999999999999 788
Q ss_pred ccCCCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 011046 256 HYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAE 335 (495)
Q Consensus 256 h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~ 335 (495)
|+. ++++.++.|++|++|+|++|+|||+|++|||++ | |+++|+++|++++++|+++++++|||++++||+++++
T Consensus 80 h~~----~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v-~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~ 153 (243)
T cd01091 80 SSS----SSDKLLYHFGVIICSLGARYKSYCSNIARTFLI-D-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTL 153 (243)
T ss_pred CCC----CCccccCCCCEEEEEeCcccCCEeecceEEEEc-C-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 954 488999999999999999999999999999999 5 7999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCc
Q 011046 336 KIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPG 415 (495)
Q Consensus 336 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg 415 (495)
+++.+. |. ++ ..+|+|++||+|||++||.+... +.+++.+|++||||+||||
T Consensus 154 ~~i~~~----~~-----------~~-~~~~~~~~GHgiGle~hE~~~~l------------~~~~~~~L~~GMvf~vepG 205 (243)
T cd01091 154 DYIKKK----KP-----------EL-EPNFTKNLGFGIGLEFRESSLII------------NAKNDRKLKKGMVFNLSIG 205 (243)
T ss_pred HHHHHh----Ch-----------hH-HHhCcCCcccccCcccccCcccc------------CCCCCCCcCCCCEEEEeCC
Confidence 998652 21 01 24789999999999999965321 2356789999999999999
Q ss_pred cccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCe-eeCCC
Q 011046 416 CYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGS-KNMTS 468 (495)
Q Consensus 416 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~-e~LT~ 468 (495)
+|+... ++ .+.+ ..+.+|+||||||+||++|+ ++||.
T Consensus 206 i~~~~~--------~~-------~~~~-~~~~~gv~ieDtV~Vt~~G~~~~LT~ 243 (243)
T cd01091 206 FSNLQN--------PE-------PKDK-ESKTYALLLSDTILVTEDEPAIVLTN 243 (243)
T ss_pred cccccC--------cc-------ccCc-cCCeeEEEEEEEEEEcCCCCceecCC
Confidence 995320 00 0011 13456999999999999999 99984
No 21
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=2.1e-42 Score=334.13 Aligned_cols=233 Identities=24% Similarity=0.272 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC-----CCCccceeeeCCCccccccCCCCCCCCCc
Q 011046 193 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYGHAAAPNDRT 267 (495)
Q Consensus 193 I~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~-----~~~~~~iv~sG~~~~~~h~~~~~~p~~~~ 267 (495)
|+.||+|+++++++++++++.++||+||.||++.+.+.+.+. |.. ...|+..+.+|.|+.++|+. |++++
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~h~~----~~~~~ 75 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEH-GAYPAPLGYYGFPKSICTSVNEVVCHGI----PDDRV 75 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc-CCCcccccCCCCCcceecCCCCceeCCC----CCCcc
Confidence 689999999999999999999999999999999998888776 543 23455677888999999954 58999
Q ss_pred cCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCC
Q 011046 268 FEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGV 347 (495)
Q Consensus 268 l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~ 347 (495)
|++||+|++|+|+.++||++|++|||++ |+++++|+++|+.++++++++++++|||++++||+++++++++ +.|+
T Consensus 76 l~~Gd~v~id~g~~~~GY~ad~~RT~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~----~~G~ 150 (238)
T cd01086 76 LKDGDIVNIDVGVELDGYHGDSARTFIV-GEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAE----KNGY 150 (238)
T ss_pred cCCCCEEEEEEEEEECCEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----HcCc
Confidence 9999999999999999999999999999 9999999999999999999999999999999999999999864 4555
Q ss_pred ccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCccccccccccccc
Q 011046 348 MVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAM 427 (495)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~~ 427 (495)
. .+.|.+||+||+.+||.|... .+....++.+|++||||++||++|+....+..+
T Consensus 151 -------------~--~~~~~~GHgiG~~~~e~p~~~---------~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~- 205 (238)
T cd01086 151 -------------S--VVREFGGHGIGRKFHEEPQIP---------NYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTL- 205 (238)
T ss_pred -------------c--eecCccccCCCCccccCCCcC---------CccCCCCCCEecCCCEEEEeeEEECCCCceEEC-
Confidence 1 246779999999999966432 111234678999999999999999742111110
Q ss_pred cccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCC
Q 011046 428 ENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 468 (495)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~ 468 (495)
.+.|.. . ..+|.+|+|+||||+||+||+|+||.
T Consensus 206 ~~~~~~-------~-~~~g~~g~~~edtv~Vte~G~e~Lt~ 238 (238)
T cd01086 206 PDGWTV-------V-TKDGSLSAQFEHTVLITEDGPEILTL 238 (238)
T ss_pred CCCCEE-------E-cCCCCEEEeeeeEEEEcCCcceeCCC
Confidence 011110 0 11467899999999999999999984
No 22
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=2.3e-42 Score=326.80 Aligned_cols=208 Identities=38% Similarity=0.571 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccccccCCCCCCCCCccCCCC
Q 011046 193 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGD 272 (495)
Q Consensus 193 I~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd 272 (495)
|++||+|+++++.++.++.+.++||+||.||++.+...+.++ |++..+|+++++||.|+..+|+. |++++|++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~-g~~~~~~~~~v~~g~~~~~~h~~----~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKL-GAEGPSFDTIVASGPNSALPHGV----PSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHc-CCCCCCCCcEEEECccccccCCC----CCCcCcCCCC
Confidence 579999999999999999999999999999999998887766 77778999999999999999965 4889999999
Q ss_pred eEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCCh
Q 011046 273 MALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNV 352 (495)
Q Consensus 273 ~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~ 352 (495)
+|++|+|+.|+||++|++||+++ |+++++|+++|+.++++++++++.+|||++++||++++++++. +.|+
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~----~~g~----- 145 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAV-GEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIE----EAGY----- 145 (208)
T ss_pred EEEEEeeeeECCEeccceeEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH----HcCc-----
Confidence 99999999999999999999999 8999999999999999999999999999999999999999874 4554
Q ss_pred HHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcccccccccccccccccc
Q 011046 353 DEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENEST 432 (495)
Q Consensus 353 ~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~~~~~~~ 432 (495)
. .+++|++||+||+++||.|.+ ..+++.+|++||||+|||++|+
T Consensus 146 --------~-~~~~~~~Gh~iG~~~~e~p~i-------------~~~~~~~l~~gmv~~iep~~~~-------------- 189 (208)
T cd01092 146 --------G-EYFIHRTGHGVGLEVHEAPYI-------------SPGSDDVLEEGMVFTIEPGIYI-------------- 189 (208)
T ss_pred --------c-ccCCCCCccccCcccCcCCCc-------------CCCCCCCcCCCCEEEECCeEEe--------------
Confidence 2 368999999999999996632 2346789999999999999986
Q ss_pred ccccchhhhcccCCcceeEEceEEEEecCCe
Q 011046 433 SKFFNHEVIGRFKDFGGVRIESDVLVTANGS 463 (495)
Q Consensus 433 ~~~~~~~~~~~~~g~~gvrieD~vlVte~G~ 463 (495)
++.+|+++||+|+||++|+
T Consensus 190 ------------~~~~g~~~ed~v~vt~~g~ 208 (208)
T cd01092 190 ------------PGKGGVRIEDDVLVTEDGC 208 (208)
T ss_pred ------------cCCCEEEeeeEEEECCCCC
Confidence 4567999999999999995
No 23
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=1e-41 Score=324.56 Aligned_cols=210 Identities=26% Similarity=0.349 Sum_probs=179.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCC--CCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccccccCCCCCCC---CCcc
Q 011046 194 ALIQFANDISSEAHVEVMKKTRVG--MKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPN---DRTF 268 (495)
Q Consensus 194 ~~~r~Aa~i~~~a~~~~~~~i~~G--~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~h~~~~~~p~---~~~l 268 (495)
+.||.+..++ ++++.+.+.++|| +||.||++.+++.+...++..+.+|+++|++|.|++++|+.+ + +++|
T Consensus 5 ~~~~~~~~~~-~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~v~~g~n~~~~H~~p----~~~~~r~l 79 (224)
T cd01085 5 AHIRDGVALV-EFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVGLSFDTISGFGPNGAIVHYSP----TEESNRKI 79 (224)
T ss_pred HHHHHHHHHH-HHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcCCCcceEEEecCccCcCCCCc----CcccCccc
Confidence 4566666664 8888899999999 999999999987665554444578999999999999999654 6 8999
Q ss_pred CCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhCCC
Q 011046 269 EDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAM-KPGVCWVDMHKLAEKIILESLKKGGV 347 (495)
Q Consensus 269 ~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~i-kpG~~~~dv~~~~~~~~~~~l~~~G~ 347 (495)
++||+|++|+|+.++||++|++|||++ |+++++|+++|+.+++++.++++.+ +||+++.+|++++++++. +.|+
T Consensus 80 ~~GD~V~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~----~~g~ 154 (224)
T cd01085 80 SPDGLYLIDSGGQYLDGTTDITRTVHL-GEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLW----KAGL 154 (224)
T ss_pred CCCCEEEEEeCccCCCcccccEEeecC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH----HhCC
Confidence 999999999999999999999999999 9999999999999999999999988 599999999999998864 3333
Q ss_pred ccCChHHHHHhhccccccccccccccC--cccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCccccccccccc
Q 011046 348 MVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVP 425 (495)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~h~~GH~iG--l~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~ 425 (495)
.|.|++||+|| |++||.|..+ ...+++.+|++||||+|||++|.
T Consensus 155 ----------------~~~h~~GHgIG~~l~~hE~P~i~-----------~~~~~~~~L~~GmvftiEP~iy~------- 200 (224)
T cd01085 155 ----------------DYGHGTGHGVGSFLNVHEGPQSI-----------SPAPNNVPLKAGMILSNEPGYYK------- 200 (224)
T ss_pred ----------------CCCCCCCCCCCCCCcCCCCCCcC-----------CcCCCCCCcCCCCEEEECCEeEe-------
Confidence 36899999999 6899966431 01235689999999999999997
Q ss_pred cccccccccccchhhhcccCCcceeEEceEEEEecCCeeeC
Q 011046 426 AMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNM 466 (495)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~L 466 (495)
+|.+|+|+||+|+||++|+.-+
T Consensus 201 -------------------~g~~gvried~v~Vt~~G~~~~ 222 (224)
T cd01085 201 -------------------EGKYGIRIENLVLVVEAETTEF 222 (224)
T ss_pred -------------------CCCeEEEeeEEEEEeeCCcCCC
Confidence 4567999999999999998643
No 24
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=1.9e-40 Score=313.54 Aligned_cols=206 Identities=33% Similarity=0.571 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccccccCCCCCCCCCccCCCCe
Q 011046 194 ALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDM 273 (495)
Q Consensus 194 ~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~ 273 (495)
++||+|+++++.+++++++.++||+||.||++.+...++.+.|..+++|++++.+|.|+.++|+. |++++|++||+
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~----~~~~~l~~gd~ 76 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPNTDLPHYT----PTDRRLQEGDI 76 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCCCGETTTB----CCSSBESTTEE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCcceeccee----ccceeeecCCc
Confidence 57999999999999999999999999999999999885555577788999999999999999975 48999999999
Q ss_pred EEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChH
Q 011046 274 ALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVD 353 (495)
Q Consensus 274 v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~~ 353 (495)
|++|+|+.|+||++|++||+++ | ++++|+++|+.++++++.+++.+|||++++||++++++++. +.|+
T Consensus 77 v~id~~~~~~gy~~d~~Rt~~~-G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~----~~g~------ 144 (207)
T PF00557_consen 77 VIIDFGPRYDGYHADIARTFVV-G-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLE----EYGL------ 144 (207)
T ss_dssp EEEEEEEEETTEEEEEEEEEES-S-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHH----HTTE------
T ss_pred ceeeccceeeeeEeeeeeEEEE-e-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHH----hhcc------
Confidence 9999999999999999999998 8 99999999999999999999999999999999999999874 3344
Q ss_pred HHHHhhccccccccccccccCcccccC-CCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcccccccccccccccccc
Q 011046 354 EMMAARLGAVFMPHGLGHFLGIDTHDP-GGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENEST 432 (495)
Q Consensus 354 ~~~~~~~~~~~~~h~~GH~iGl~~he~-~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~~~~~~~ 432 (495)
..+++|.+||+||+++||. |.+. ..+++.+|++||||+|||++++.
T Consensus 145 --------~~~~~~~~GH~iG~~~~~~~P~i~------------~~~~~~~l~~gmv~~iep~~~~~------------- 191 (207)
T PF00557_consen 145 --------EEPYPHGLGHGIGLEFHEPGPNIA------------RPGDDTVLEPGMVFAIEPGLYFI------------- 191 (207)
T ss_dssp --------GEEBTSSSEEEESSSSSEEEEEES------------STTTSSB--TTBEEEEEEEEEEE-------------
T ss_pred --------cceeeecccccccccccccceeee------------cccccceecCCCceeEeeeEEcc-------------
Confidence 1467899999999999985 4321 13467899999999999999853
Q ss_pred ccccchhhhcccCCcceeEEceEEEEec
Q 011046 433 SKFFNHEVIGRFKDFGGVRIESDVLVTA 460 (495)
Q Consensus 433 ~~~~~~~~~~~~~g~~gvrieD~vlVte 460 (495)
++.+|+++||+|+|||
T Consensus 192 ------------~~~~g~~~ed~v~Vte 207 (207)
T PF00557_consen 192 ------------PGWGGVRFEDTVLVTE 207 (207)
T ss_dssp ------------TTSEEEEEBEEEEEES
T ss_pred ------------CCCcEEEEEEEEEECc
Confidence 3567999999999996
No 25
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=3.2e-38 Score=297.14 Aligned_cols=207 Identities=31% Similarity=0.519 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccccccCCCCCCCCCccCCCC
Q 011046 193 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGD 272 (495)
Q Consensus 193 I~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd 272 (495)
|+.||+|+++++++++.+++.++||+||.|+.+.+...+.++ |+ .+++.+++++|.++..+|+.+ +++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~-g~-~~~~~~~v~~g~~~~~~h~~~----~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAA-GG-YPAGPTIVGSGARTALPHYRP----DDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHc-CC-CCCCCcEEEECccccCcCCCC----CCCCcCCCC
Confidence 578999999999999999999999999999999999988877 54 577889999999999999754 789999999
Q ss_pred eEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCCh
Q 011046 273 MALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNV 352 (495)
Q Consensus 273 ~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~ 352 (495)
+|++|+|+.++||++|++||+++ |+++++|+++|+.+.++++.+++.+|||+++.||++++++++.+ .|+
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~-g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~----~g~----- 144 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVI-GEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEE----HGL----- 144 (207)
T ss_pred EEEEEeceeECCCccceeceeEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH----cCc-----
Confidence 99999999999999999999999 89999999999999999999999999999999999999998753 343
Q ss_pred HHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcccccccccccccccccc
Q 011046 353 DEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENEST 432 (495)
Q Consensus 353 ~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~~~~~~~ 432 (495)
. .++.|++||+||+++||.|.+ ...++.+|++||||+|||++|.
T Consensus 145 --------~-~~~~~~~Gh~iG~~~~e~~~~-------------~~~~~~~l~~gmv~~iep~~~~-------------- 188 (207)
T cd01066 145 --------G-PNFGHRTGHGIGLEIHEPPVL-------------KAGDDTVLEPGMVFAVEPGLYL-------------- 188 (207)
T ss_pred --------c-ccCCCCCccccCcccCCCCCc-------------CCCCCCCcCCCCEEEECCEEEE--------------
Confidence 1 367899999999999996642 2345689999999999999986
Q ss_pred ccccchhhhcccCCcceeEEceEEEEecCCe
Q 011046 433 SKFFNHEVIGRFKDFGGVRIESDVLVTANGS 463 (495)
Q Consensus 433 ~~~~~~~~~~~~~g~~gvrieD~vlVte~G~ 463 (495)
++.+|+++||+|+||++|+
T Consensus 189 ------------~~~~g~~~ed~v~vt~~g~ 207 (207)
T cd01066 189 ------------PGGGGVRIEDTVLVTEDGP 207 (207)
T ss_pred ------------CCCcEEEeeeEEEEeCCCC
Confidence 3345999999999999985
No 26
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=3.7e-38 Score=302.01 Aligned_cols=214 Identities=16% Similarity=0.178 Sum_probs=177.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH---------cCCCCCCCccceeeeCCCccccccCCCCCC
Q 011046 193 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYM---------YGGCRHCSYTCICATGENSAVLHYGHAAAP 263 (495)
Q Consensus 193 I~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~---------~~G~~~~~~~~iv~sG~~~~~~h~~~~~~p 263 (495)
++.||+|++|++++++.+++.++||+||.||....+..+.. ..|..+.+|+++++ .|+..+|+.+...+
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~--~n~~~~H~~p~~~~ 78 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCIS--VNNCVCHFSPLKSD 78 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEec--cCceeecCCCCCCC
Confidence 36899999999999999999999999999997666555544 14566788887777 48888998641113
Q ss_pred CCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCH-----HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011046 264 NDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTS-----DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII 338 (495)
Q Consensus 264 ~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~-----~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~ 338 (495)
++++|++||+|++|+|+.|+||++|++|||++ |++++ +++++|++++++|+++++++|||++++||++++++++
T Consensus 79 ~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v-G~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~ 157 (228)
T cd01089 79 ATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVV-GAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVI 157 (228)
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEEEEEEEe-CCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 78899999999999999999999999999999 88874 8999999999999999999999999999999999997
Q ss_pred HHHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcccc
Q 011046 339 LESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF 418 (495)
Q Consensus 339 ~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~ 418 (495)
.+.|+. .+ ..++.|++||++ ..++.+. +-..+|++||||++||+++.
T Consensus 158 ----~~~G~~----------~~-~~~~~h~~g~~~--~~~~~~~----------------~~~~~l~~gmvf~~ep~~~~ 204 (228)
T cd01089 158 ----VDYGCT----------PV-EGVLSHQLKRVV--SSGEGKA----------------KLVECVKHGLLFPYPVLYEK 204 (228)
T ss_pred ----HHcCCE----------Ee-cCccccCcCceE--ecCCCCc----------------cchhhccCCcccccceeEcc
Confidence 456641 11 247789999944 4443110 12578999999999999986
Q ss_pred ccccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCC
Q 011046 419 IDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTS 468 (495)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~ 468 (495)
+|.+++++||||+||++|+|.||.
T Consensus 205 --------------------------~g~~~~~~~~Tv~vt~~G~e~lt~ 228 (228)
T cd01089 205 --------------------------EGEVVAQFKLTVLLTPNGVTVLTG 228 (228)
T ss_pred --------------------------CCCeEEEEEEEEEEcCCCCeeCCC
Confidence 577899999999999999999983
No 27
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=100.00 E-value=9.5e-38 Score=320.89 Aligned_cols=361 Identities=15% Similarity=0.191 Sum_probs=264.1
Q ss_pred cccccccCCCc-eeecCCCCCCeEEEEEecCCeeEEecCCCCccccccc-------ccCCChhHHHHHhcCceecchhHH
Q 011046 58 HLELFRQESYF-AYLFGVREPGFYGAIDIATGKSILFAPRLPPDYAVWL-------GKIKPLSYFQEKYMVNMVYYTDEI 129 (495)
Q Consensus 58 ~~~~f~~~sn~-~YLtG~~~~~~~lvl~~~~g~~~l~v~~~~~~~~~~~-------~~~~~~~~~~~~~~~d~~~~~~~~ 129 (495)
...||+..+.+ .||.||++|++++++.+ +..++++++..+..-.-. +..++...+...-.-+....++.+
T Consensus 9 dd~~Y~KssAL~~WLlGYEfpdTilv~~~--~~i~iltSkkKa~~l~~~~~~~~~~~~~~~v~llvR~k~d~n~~~fdki 86 (960)
T KOG1189|consen 9 DDNPYQKSSALFTWLLGYEFPDTILVLCK--DKIYILTSKKKAEFLQKVTNLAQSSEGKPTVNLLVRDKNDDNKGLFDKI 86 (960)
T ss_pred cccchhHHHHHHHHHhccccCceEEEEec--CcEEEEecchhHHHHHhhcccccCcccCcceEEEecccCccccccHHHH
Confidence 34566666665 59999999999988864 577777777655421110 011111111110001111122334
Q ss_pred HHHHHhcccCCCCCeEEEecCCCCCCCCCCchhhhhhhccccccccchHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHH
Q 011046 130 VGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEKFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVE 209 (495)
Q Consensus 130 ~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~i~~lR~vKs~~EI~~~r~Aa~i~~~a~~~ 209 (495)
.+.++. .++++|+... +.-.+.|+ ..|.+.+...+.+.+|++..+..+-+||++.||+.+|+|+.++...|..
T Consensus 87 i~~ik~-----~gk~vGvf~k-e~~~G~F~-~~W~~~l~~~~fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k 159 (960)
T KOG1189|consen 87 IKAIKS-----AGKKVGVFAK-EKFQGEFM-ESWNKRLEAGGFNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNK 159 (960)
T ss_pred HHHHHh-----cCCeeeeecc-cccchhHH-HHHHHHhhhcCCceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHH
Confidence 444433 4788988543 33344444 3455666655678899999999999999999999999999999999985
Q ss_pred HH-----HHccCC--CCHHHHHHHHHHHHHHcC---CC----CCCCccceeeeCCCccccccCCCCCCCCCccCCCCeEE
Q 011046 210 VM-----KKTRVG--MKEYQMESMFLHHTYMYG---GC----RHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMAL 275 (495)
Q Consensus 210 ~~-----~~i~~G--~tE~el~a~~~~~~~~~~---G~----~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~ 275 (495)
.+ .+|..| +|+..+...++..+.... |. -+++|+||++||.+..+-.. +..++..| + +|+
T Consensus 160 ~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~~d~cY~PIiqSGg~ydlk~s---a~s~~~~L--~-~I~ 233 (960)
T KOG1189|consen 160 YLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDLLDMCYPPIIQSGGKYDLKPS---AVSDDNHL--H-VIL 233 (960)
T ss_pred HHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCccccccccChhhhcCCccccccc---cccccccc--c-eEE
Confidence 44 455555 688888877777664321 11 25799999999999876442 34577777 4 999
Q ss_pred EEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHH
Q 011046 276 LDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEM 355 (495)
Q Consensus 276 iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~ 355 (495)
+.+|++|++|||+++||+.| .|+.+|.+.|++++.+|++++..+|||++.++||.++.+++.+. + +++
T Consensus 234 cs~G~RynsYCSNv~RT~Li--dpssemq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~--~--------Pel 301 (960)
T KOG1189|consen 234 CSLGIRYNSYCSNVSRTYLI--DPSSEMQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKN--K--------PEL 301 (960)
T ss_pred eeccchhhhhhccccceeee--cchHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhc--C--------cch
Confidence 99999999999999999999 99999999999999999999999999999999999999998752 1 112
Q ss_pred HHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCccccccccccccccccccccc
Q 011046 356 MAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKF 435 (495)
Q Consensus 356 ~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~~~~~~~~~~ 435 (495)
. ..|...+|.+|||+++|..... +++|+.+|++||||.|..|+.... ++..
T Consensus 302 ~------~~~~k~lG~~iGlEFREssl~i------------naKnd~~lk~gmvFni~lGf~nl~---n~~~-------- 352 (960)
T KOG1189|consen 302 V------PNFTKNLGFGIGLEFRESSLVI------------NAKNDRVLKKGMVFNISLGFSNLT---NPES-------- 352 (960)
T ss_pred h------hhhhhhcccccceeeecccccc------------cccchhhhccCcEEEEeecccccc---Cccc--------
Confidence 1 2466779999999999965332 568899999999999999986532 1111
Q ss_pred cchhhhcccCCcceeEEceEEEEecCCe-eeCCCCCCCHHHHHHHHhcC
Q 011046 436 FNHEVIGRFKDFGGVRIESDVLVTANGS-KNMTSVPREISDIEAIMAGA 483 (495)
Q Consensus 436 ~~~~~~~~~~g~~gvrieD~vlVte~G~-e~LT~~p~~~~~Ie~~~~~~ 483 (495)
.+.+.+.|.|||+|+++++ ++||.+++....|.+++...
T Consensus 353 ---------~~~yaL~l~DTvlv~e~~p~~vLT~~~K~~~dv~~~f~~e 392 (960)
T KOG1189|consen 353 ---------KNSYALLLSDTVLVGEDPPAEVLTDSAKAVKDVSYFFKDE 392 (960)
T ss_pred ---------ccchhhhccceeeecCCCcchhhcccchhhcccceeeccc
Confidence 2235889999999999997 99999999999999888643
No 28
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.5e-35 Score=279.28 Aligned_cols=242 Identities=24% Similarity=0.303 Sum_probs=196.0
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc------CCCCCCCccceeeeCCCccccccCCC
Q 011046 187 FKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMY------GGCRHCSYTCICATGENSAVLHYGHA 260 (495)
Q Consensus 187 vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~------~G~~~~~~~~iv~sG~~~~~~h~~~~ 260 (495)
+|+++||+.||+|++|+.++++.+...++||+|..||....+..+.++ .|..++.| +++.| .|...+|+.+
T Consensus 5 ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~-~~ciS-vNe~v~HgiP- 81 (255)
T COG0024 5 IKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPF-PTCIS-VNEVVAHGIP- 81 (255)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCc-ceEee-hhheeeecCC-
Confidence 899999999999999999999999999999999999999999888763 13334444 45555 8999999654
Q ss_pred CCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCC-HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011046 261 AAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFT-SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 339 (495)
Q Consensus 261 ~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~-~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~ 339 (495)
. .+++|++||+|.||+|+.++||++|.++|+.| |+.+ +..+++.+++.+++.++++.+|||++.+||-+++.+++
T Consensus 82 ~--d~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~v-g~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~- 157 (255)
T COG0024 82 G--DKKVLKEGDIVKIDVGAHIDGYIGDTAITFVV-GEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYA- 157 (255)
T ss_pred C--CCcccCCCCEEEEEEEEEECCeeeeEEEEEEC-CCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH-
Confidence 1 46789999999999999999999999999999 7655 57777999999999999999999999999999999886
Q ss_pred HHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCccccc
Q 011046 340 ESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFI 419 (495)
Q Consensus 340 ~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~ 419 (495)
+..||.+ + +.| +|||||..+||-|..+ .+.......+|++||||+|||.+...
T Consensus 158 ---~~~G~~v--V---------r~~----~GHgig~~~He~p~ip---------~y~~~~~~~~l~~Gmv~aIEPmi~~G 210 (255)
T COG0024 158 ---ESRGFSV--V---------RNL----TGHGIGRELHEEPSIP---------NYGKDGTGVRLKEGMVFAIEPMINTG 210 (255)
T ss_pred ---HHcCCEE--e---------ecc----cCCccCcccCCCCeec---------cccCCCCCcccCCCCEEEEeeEEEcC
Confidence 3667621 1 123 6999999999966544 33333344799999999999988776
Q ss_pred cccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCCCCC
Q 011046 420 DALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVP 470 (495)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT~~p 470 (495)
.........+.|+.... .|...+++|+||+||++|+++||..+
T Consensus 211 ~~~~~~~~~d~Wt~~t~--------d~~~~aq~EHTv~Vt~~g~eilT~~~ 253 (255)
T COG0024 211 SGEVVEGPSDRWTLVTK--------DGSLSAQFEHTVIVTEDGCEILTLRP 253 (255)
T ss_pred CCceEecCCCCeEEEeC--------CCCEEeEEEEEEEEeCCCcEEeeCCC
Confidence 55454555566664332 23348899999999999999999654
No 29
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-35 Score=276.48 Aligned_cols=244 Identities=18% Similarity=0.235 Sum_probs=203.2
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC-----CCCccceeeeCCCccccccCC
Q 011046 185 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-----HCSYTCICATGENSAVLHYGH 259 (495)
Q Consensus 185 R~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~-----~~~~~~iv~sG~~~~~~h~~~ 259 (495)
-.|.+++||+.||+|++++.+.+..+...++||+|..||......++.++ |+. +..|+--+.+..|-.++|
T Consensus 114 i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ier-g~YPSPLnYy~FPKS~CTSVNEviCH--- 189 (369)
T KOG2738|consen 114 IKILDPEGIEGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIER-GAYPSPLNYYGFPKSVCTSVNEVICH--- 189 (369)
T ss_pred eeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhc-CCcCCCcccCCCchhhhcchhheeec---
Confidence 35789999999999999999999999999999999999999999998887 442 345655566669999999
Q ss_pred CCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011046 260 AAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 339 (495)
Q Consensus 260 ~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~ 339 (495)
++|+.|+|++||+|.||+...++||+.|..+||+| |+.+++.+++.+...++++.+|+.+|||+++++|.+.+.+..
T Consensus 190 -GIPD~RpLedGDIvNiDVtvY~~GyHGDlneTffv-G~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha- 266 (369)
T KOG2738|consen 190 -GIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFV-GNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHA- 266 (369)
T ss_pred -CCCCcCcCCCCCEEeEEEEEEeccccCccccceEe-eccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHh-
Confidence 88999999999999999999999999999999999 999999999999999999999999999999999999887765
Q ss_pred HHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCccccc
Q 011046 340 ESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFI 419 (495)
Q Consensus 340 ~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~ 419 (495)
.+.||. .+ +.| +|||||--+|-.|++ |.+...+...++.+||+|||||.+...
T Consensus 267 ---~~~g~s--VV---------r~y----cGHGig~~FH~~Pni---------pHya~n~a~GvM~~G~tFTIEPmit~G 319 (369)
T KOG2738|consen 267 ---TKNGYS--VV---------RSY----CGHGIGRVFHCAPNI---------PHYAKNKAPGVMKPGQTFTIEPMITIG 319 (369)
T ss_pred ---hhcCce--ee---------hhh----hccccccccccCCCc---------hhhcccCCcceeecCceEEeeeeeccc
Confidence 456661 11 123 699999999976644 445444455789999999999988764
Q ss_pred cccccccccccccccccchhhhcccCCcceeEEceEEEEecCCeeeCC-CCCC
Q 011046 420 DALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPR 471 (495)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G~e~LT-~~p~ 471 (495)
. ..+..+.|.|++..- .|....++|.|+|||++|+|+|| +.|.
T Consensus 320 ~-~~d~tWPD~WT~vTa--------DG~~sAQFEhTlLVT~tG~EILT~r~~~ 363 (369)
T KOG2738|consen 320 T-WEDITWPDDWTAVTA--------DGKRSAQFEHTLLVTETGCEILTKRLPN 363 (369)
T ss_pred c-cccccCCCCceEEec--------CCceecceeeEEEEecccceehhcccCC
Confidence 3 334445566765432 35558999999999999999999 5554
No 30
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=6.8e-32 Score=267.13 Aligned_cols=189 Identities=24% Similarity=0.299 Sum_probs=158.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccccccCCCCCCCCCccCCC
Q 011046 192 ELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDG 271 (495)
Q Consensus 192 EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~G 271 (495)
+|+.||+|++|++++++.+++.++||+||.||++.++..+.+. |. +++|++++++|.+ .+||.+ ...++++|++|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~-g~-~~afp~~vs~n~~--~~H~~p-~~~d~~~l~~G 75 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIREL-GA-KPAFPCNISINEV--AAHYTP-SPGDERVFPEG 75 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHc-CC-ccCCCCEEeeCCC--ccCCCC-CCCCCcccCCC
Confidence 5899999999999999999999999999999999999888776 44 4788888886554 579875 11236889999
Q ss_pred CeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCC
Q 011046 272 DMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGN 351 (495)
Q Consensus 272 d~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~ 351 (495)
|+|.+|+|+.++||++|++||+++ | ++++++++++.+|++++++.+|||++++||++++++++. +.|+
T Consensus 76 DvV~iD~G~~~dGY~aD~arT~~v-G---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~----~~G~---- 143 (291)
T PRK08671 76 DVVKLDLGAHVDGYIADTAVTVDL-G---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIR----SYGF---- 143 (291)
T ss_pred CEEEEEEeEEECCEEEEEEEEEEe-C---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----HcCC----
Confidence 999999999999999999999999 6 588999999999999999999999999999999999874 5565
Q ss_pred hHHHHHhhccccccccccccccCc-ccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcccc
Q 011046 352 VDEMMAARLGAVFMPHGLGHFLGI-DTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF 418 (495)
Q Consensus 352 ~~~~~~~~~~~~~~~h~~GH~iGl-~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~ 418 (495)
. .+.|.+||+||+ .+|+.|.++ .+ ...++.+|++||||+|||.+..
T Consensus 144 ---------~--~~~~~~GHgiG~~~~he~p~ip---------~~-~~~~~~~le~GmV~aIEp~~t~ 190 (291)
T PRK08671 144 ---------K--PIRNLTGHGLERYELHAGPSIP---------NY-DEGGGVKLEEGDVYAIEPFATD 190 (291)
T ss_pred ---------c--ccCCCcccCcCCCcccCCCccC---------cc-CCCCCceeCCCCEEEEcceEEC
Confidence 1 235779999996 888865443 11 2345789999999999997543
No 31
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=1.6e-31 Score=273.93 Aligned_cols=204 Identities=14% Similarity=0.104 Sum_probs=164.9
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc---CCC-CCCCccceeeeCCCccccccCCC
Q 011046 185 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMY---GGC-RHCSYTCICATGENSAVLHYGHA 260 (495)
Q Consensus 185 R~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~---~G~-~~~~~~~iv~sG~~~~~~h~~~~ 260 (495)
+..+|++||+.||+|++|+.++++.+.+.|+||||+.||++.++..+++. .|. .+.+|++.++ .|.+.+|+.+
T Consensus 150 ~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt~vS--~N~~aaH~tP- 226 (470)
T PTZ00053 150 LEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCGWAFPTGCS--LNHCAAHYTP- 226 (470)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcccCCCCceee--cCccccCCCC-
Confidence 34579999999999999999999999999999999999999888765432 244 3678887653 7888999764
Q ss_pred CCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011046 261 AAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 340 (495)
Q Consensus 261 ~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~ 340 (495)
...++++|++||+|.||+|+.++||++|++||+++ | ++++++++++++|+++++++++||++++||.+++++++.
T Consensus 227 ~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~v-g---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevie- 301 (470)
T PTZ00053 227 NTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAF-N---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIE- 301 (470)
T ss_pred CCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEe-C---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-
Confidence 11136889999999999999999999999999998 5 789999999999999999999999999999999999974
Q ss_pred HHHhCCCccCChHHHHHhhccccc-----cccccccccCc-ccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcC
Q 011046 341 SLKKGGVMVGNVDEMMAARLGAVF-----MPHGLGHFLGI-DTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEP 414 (495)
Q Consensus 341 ~l~~~G~~~~~~~~~~~~~~~~~~-----~~h~~GH~iGl-~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiep 414 (495)
+.|+-- ...+ ..|.+||+||+ .+|+.+.+| .+ ...+..+|++||||+|||
T Consensus 302 ---s~G~e~-----------~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP---------~v-~~~~~~~LeeGmVfaIEP 357 (470)
T PTZ00053 302 ---SYEVEI-----------KGKTYPIKSIRNLNGHSIGPYIIHGGKSVP---------IV-KGGENTRMEEGELFAIET 357 (470)
T ss_pred ---HcCCcc-----------cCcccccccccCCcccCCCCccccCCCcCC---------ee-CCCCCCEecCCCEEEEcc
Confidence 455410 0112 37899999997 899844322 11 124567999999999999
Q ss_pred cccccc
Q 011046 415 GCYFID 420 (495)
Q Consensus 415 g~y~~~ 420 (495)
.+....
T Consensus 358 f~stG~ 363 (470)
T PTZ00053 358 FASTGR 363 (470)
T ss_pred eeeCCC
Confidence 654433
No 32
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=100.00 E-value=2.6e-31 Score=263.09 Aligned_cols=189 Identities=22% Similarity=0.296 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccccccCCCCCCCCCccC
Q 011046 190 DHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFE 269 (495)
Q Consensus 190 ~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~ 269 (495)
-+||+.||+|++|++++++.+++.++||++|.||++.++..+.+. |+. ++|+++++ .|...+||.+ ..+++++|+
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~-g~~-~aFp~~vs--~n~~~~H~~p-~~~d~~~l~ 76 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIREL-GAE-PAFPCNIS--INECAAHFTP-KAGDKTVFK 76 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHc-CCC-CCCCccee--cCCEeeCCCC-CCCcCccCC
Confidence 378999999999999999999999999999999999999888876 544 78988876 4667789875 222467899
Q ss_pred CCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCcc
Q 011046 270 DGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMV 349 (495)
Q Consensus 270 ~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~ 349 (495)
+||+|.+|+|+.++||++|++||+++ |+ .++++|+++++|++++++.+|||++++||++++++++. +.|+
T Consensus 77 ~GDvV~iD~G~~~dGY~aD~arT~~v-G~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~----~~G~-- 146 (295)
T TIGR00501 77 DGDVVKLDLGAHVDGYIADTAITVDL-GD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIE----SYGV-- 146 (295)
T ss_pred CCCEEEEEEeEEECCEEEEEEEEEEe-Cc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----HcCC--
Confidence 99999999999999999999999999 64 37899999999999999999999999999999999974 4565
Q ss_pred CChHHHHHhhccccccccccccccC-cccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcc
Q 011046 350 GNVDEMMAARLGAVFMPHGLGHFLG-IDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGC 416 (495)
Q Consensus 350 ~~~~~~~~~~~~~~~~~h~~GH~iG-l~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~ 416 (495)
. -..|.+||++| +.+|+.+.+| .+ ..+++.+|++||||+|||.+
T Consensus 147 -----------~--~i~~~~GHgig~~~~h~g~~ip---------~i-~~~~~~~le~GmV~aIEP~~ 191 (295)
T TIGR00501 147 -----------K--PISNLTGHSMAPYRLHGGKSIP---------NV-KERDTTKLEEGDVVAIEPFA 191 (295)
T ss_pred -----------e--eecCCCCcceecccccCCCccC---------ee-cCCCCCEeCCCCEEEEceeE
Confidence 2 13578999999 5778633221 11 22456889999999999954
No 33
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.98 E-value=7.1e-31 Score=259.87 Aligned_cols=187 Identities=20% Similarity=0.229 Sum_probs=155.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccccccCCCCCCCCCccCCCC
Q 011046 193 LALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGD 272 (495)
Q Consensus 193 I~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd 272 (495)
++.||+|++|++++++++++.++||+||.||++.++..+.+. |. +++|++.+ +.|...+||.+ ...++++|++||
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~-G~-~~afp~~i--s~n~~~~H~~p-~~~d~~~l~~GD 75 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIREL-GA-GPAFPVNL--SINECAAHYTP-NAGDDTVLKEGD 75 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHc-CC-CCCCCcee--ccCCEeeCCCC-CCCCCcccCCCC
Confidence 368999999999999999999999999999999999888776 44 57787554 46778899875 112358999999
Q ss_pred eEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCCh
Q 011046 273 MALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNV 352 (495)
Q Consensus 273 ~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~ 352 (495)
+|.+|+|+.++||++|++||+++ |+ +++++|+++++|++++++.+|||++++||++++++++. +.|+
T Consensus 76 vV~iD~G~~~dGY~sD~arT~~v-g~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~----~~G~----- 142 (291)
T cd01088 76 VVKLDFGAHVDGYIADSAFTVDF-DP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIE----SYGF----- 142 (291)
T ss_pred EEEEEEEEEECCEEEEEEEEEec-Ch---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH----HcCC-----
Confidence 99999999999999999999998 53 88999999999999999999999999999999999974 4565
Q ss_pred HHHHHhhccccccccccccccC-cccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCccc
Q 011046 353 DEMMAARLGAVFMPHGLGHFLG-IDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCY 417 (495)
Q Consensus 353 ~~~~~~~~~~~~~~h~~GH~iG-l~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y 417 (495)
. -..|.+||+|| +.+|+.+.++ .+ ...++.+|++||||+|||.+.
T Consensus 143 --------~--~~~~~~GHgig~~~~h~~~~ip---------~~-~~~~~~~le~gmV~aIEp~~s 188 (291)
T cd01088 143 --------K--PIRNLTGHSIERYRLHAGKSIP---------NV-KGGEGTRLEEGDVYAIEPFAT 188 (291)
T ss_pred --------E--EeecCCccCccCccccCCCccC---------cc-CCCCCCEeCCCCEEEEceeEE
Confidence 2 13578999999 5888854322 11 123468999999999999653
No 34
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.98 E-value=9.3e-32 Score=271.56 Aligned_cols=400 Identities=15% Similarity=0.145 Sum_probs=276.2
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCcceeeecCCcccccccCCCc-eeecCCCCCCeEEEEEecCC
Q 011046 10 PKVPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYF-AYLFGVREPGFYGAIDIATG 88 (495)
Q Consensus 10 ~~~~~~~y~~R~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~d~~~~f~~~sn~-~YLtG~~~~~~~lvl~~~~g 88 (495)
..|+.+.|.+|...|+..|.+. .-++|+++|+.|+. +...||+.++.+ .||.||++|.+++++. ++
T Consensus 4 ~~ide~~F~kR~~~l~~~~ne~----dG~p~sllv~lG~s-------~d~npyqk~taLh~wLLgYEFP~Tli~l~--~~ 70 (1001)
T COG5406 4 IRIDEERFEKRSRDLRKHLNEE----DGGPDSLLVMLGKS-------QDVNPYQKNTALHIWLLGYEFPETLIILD--DV 70 (1001)
T ss_pred ccccHHHHHHHHHHHHHhhhhc----cCCCceEEEEeccc-------cccChhhhhhHHHHHHHhccCcceEEEEe--cc
Confidence 4688999999999999999652 23568999999864 455788777765 4999999999987775 36
Q ss_pred eeEEecCCCCccccc---cc--ccCCChhHHHHHhcCceecchhHHHHHHH---hcccCCCCCeEEEecCCCCCCCCCCc
Q 011046 89 KSILFAPRLPPDYAV---WL--GKIKPLSYFQEKYMVNMVYYTDEIVGVLQ---GHYKEPGKPLLFLLHGLNTDSNNFSK 160 (495)
Q Consensus 89 ~~~l~v~~~~~~~~~---~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~l~---~~~~~~~~~~i~~~~g~~~~~~~~~~ 160 (495)
..++.++...+.... .. +.+.....+.. ....+...+++. .+++. ..+.||+... +.-.+.|+.
T Consensus 71 ~~~I~ts~~kA~~lqk~l~~~~~~~v~~n~~~r------~k~~eenkKlF~~~i~~i~s-~~k~VG~f~k-D~~qgkfi~ 142 (1001)
T COG5406 71 CTAITTSKKKAILLQKGLAETSLNIVVRNKDNR------TKNMEENKKLFKGSIYVIGS-ENKIVGDFCK-DVLQGKFIN 142 (1001)
T ss_pred eEEEEechhhHHHHHhhhccCcchhhhhhhhhc------ccCHHHHHHHHhhhheeccc-CCcccCccch-hhhhccccc
Confidence 667766654443110 00 00111111111 111122222222 23221 2456665322 222333432
Q ss_pred hh--hhhhhccccccccchHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHc----cCC--CCHHHHHHHHHHHH-
Q 011046 161 PA--QFEGMEKFETELNTLHPILSECRVFKSDHELALIQFANDISSEAHVEVMKKT----RVG--MKEYQMESMFLHHT- 231 (495)
Q Consensus 161 ~~--~~~~l~~~~~~~~d~~~~i~~lR~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i----~~G--~tE~el~a~~~~~~- 231 (495)
.+ .++.+.. ..+.+|++.-+..+-.+|+++||+.+|.+++.++..|....+.+ ..+ +|+..+...++..+
T Consensus 143 ew~~i~e~vk~-efN~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~id 221 (1001)
T COG5406 143 EWDSIFEPVKS-EFNASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLID 221 (1001)
T ss_pred ccchhhhhhhh-hcchhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcc
Confidence 21 1232221 35678899999999999999999999999999999988444322 221 44455544444322
Q ss_pred ---H-Hc----CCC-----CCCCccceeeeCCCccccccCCCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCC
Q 011046 232 ---Y-MY----GGC-----RHCSYTCICATGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGK 298 (495)
Q Consensus 232 ---~-~~----~G~-----~~~~~~~iv~sG~~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~ 298 (495)
+ +. .|- -.++|.||++||....+.-. +...++.+ .||+|++.+|.+|+||||+++||+++ +
T Consensus 222 dv~f~q~~s~~l~~~~~d~lew~ytpiiqsg~~~Dl~ps---a~s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~--d 295 (1001)
T COG5406 222 DVEFFQTKSLKLGDIDLDQLEWCYTPIIQSGGSIDLTPS---AFSFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILT--D 295 (1001)
T ss_pred hhhhhhhcCccccccchhhhhhhcchhhccCceeecccc---cccCchhh-cCceEEEEeeeeeccccccccceEEe--C
Confidence 1 11 011 25799999999988765221 22344554 48899999999999999999999987 9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccc
Q 011046 299 FTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTH 378 (495)
Q Consensus 299 ~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~h 378 (495)
|+.+|.+.|+.++.+|+.++..+|||.+.++||..+.+++... |. ..+ ..|..++|-+||++++
T Consensus 296 p~~e~~~Ny~fl~~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~----~p-----------el~-pnF~~nvG~~igiefR 359 (1001)
T COG5406 296 PDSEQQKNYEFLYMLQKYILGLVRPGTDSGIIYSEAEKYISSN----GP-----------ELG-PNFIYNVGLMIGIEFR 359 (1001)
T ss_pred CchHhhhhHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHhc----CC-----------ccC-chHhhhhhhhcccccc
Confidence 9999999999999999999999999999999999999998642 21 011 3566789999999999
Q ss_pred cCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEE
Q 011046 379 DPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLV 458 (495)
Q Consensus 379 e~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlV 458 (495)
+... ..+.+++++|+.||+|.|..|+-. ++++++. +.+++.+-||+-|
T Consensus 360 ~s~~------------~~nvkn~r~lq~g~~fnis~gf~n---l~~~~~~-----------------Nnyal~l~dt~qi 407 (1001)
T COG5406 360 SSQK------------PFNVKNGRVLQAGCIFNISLGFGN---LINPHPK-----------------NNYALLLIDTEQI 407 (1001)
T ss_pred cccc------------ceeccCCceeccccEEEEeecccc---cCCCCcc-----------------cchhhhhccceEe
Confidence 8431 125678899999999999998865 3333332 2358899999999
Q ss_pred ecCCeeeCCCCCCCHHHHHHHHhcCCC
Q 011046 459 TANGSKNMTSVPREISDIEAIMAGAPW 485 (495)
Q Consensus 459 te~G~e~LT~~p~~~~~Ie~~~~~~~~ 485 (495)
+-+.+.++|..|+.--+|.++++..+.
T Consensus 408 ~ls~p~~~t~~~kaq~~isf~fgedd~ 434 (1001)
T COG5406 408 SLSNPIVFTDSPKAQGDISFLFGEDDE 434 (1001)
T ss_pred ecCCceecccCcccccceeEEecCCCC
Confidence 999999999999999999999985533
No 35
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=99.98 E-value=1.6e-30 Score=265.44 Aligned_cols=209 Identities=16% Similarity=0.148 Sum_probs=166.9
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc---------CCCCCCCccceeeeCCCcccc
Q 011046 185 RVFKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMY---------GGCRHCSYTCICATGENSAVL 255 (495)
Q Consensus 185 R~vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~---------~G~~~~~~~~iv~sG~~~~~~ 255 (495)
-.+|+++||+.||+|++|+.++++.+.+.++||+|+.||++..+..+.++ .+..+++|+++++ .|...+
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vS--vN~~v~ 88 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCIS--VNNCVG 88 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEe--cCCeee
Confidence 35899999999999999999999999999999999999998776666542 2345678887776 789999
Q ss_pred ccCCCCCCC--CCccCCCCeEEEEeCeEECceEeeeeeEEEeCCC-----CCHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Q 011046 256 HYGHAAAPN--DRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGK-----FTSDQSLIYNAVLKAHNAVINAMKPGVCWV 328 (495)
Q Consensus 256 h~~~~~~p~--~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~-----~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~ 328 (495)
||.+ .++ +++|++||+|.||+|+.++||++|++||++| |+ ++++++++++++++|++++++.+|||++++
T Consensus 89 H~~P--~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~v-G~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~ 165 (389)
T TIGR00495 89 HFSP--LKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVV-GVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNT 165 (389)
T ss_pred CCCC--CCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEE-CCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHH
Confidence 9764 122 4789999999999999999999999999999 64 578999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCccccc-CCCCCCCCCCCCCCCCcCCCCCCccCCC
Q 011046 329 DMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHD-PGGYPKGTERSKEPGLKSLRTVRELQER 407 (495)
Q Consensus 329 dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he-~~~~~~~~~~~~~~~~~~~~~~~~l~~G 407 (495)
||+.++++++ ++.|+. -..+-+||+||..+|| .+.++..+. +.......+..|++|
T Consensus 166 dI~~ai~~v~----~~~G~~---------------~v~~~~gH~igr~~~~g~~~Ii~~~~----~~~~~~~~~~~le~g 222 (389)
T TIGR00495 166 QVTEAINKVA----HSYGCT---------------PVEGMLSHQLKQHVIDGEKVIISNPS----DSQKKDHDTAEFEEN 222 (389)
T ss_pred HHHHHHHHHH----HHcCCe---------------ecCCceeecccceeccCCCeeeecCC----ccccCCCCCCEecCC
Confidence 9999999997 456662 2334579999999998 333221100 000011245789999
Q ss_pred CEEEEcCccccccc
Q 011046 408 MVITVEPGCYFIDA 421 (495)
Q Consensus 408 Mv~tiepg~y~~~~ 421 (495)
|||+|||.+.....
T Consensus 223 ev~aIEp~vs~G~g 236 (389)
T TIGR00495 223 EVYAVDILVSTGEG 236 (389)
T ss_pred CEEEEeeeecCCCc
Confidence 99999997655443
No 36
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.95 E-value=1.1e-26 Score=237.04 Aligned_cols=240 Identities=28% Similarity=0.373 Sum_probs=194.0
Q ss_pred HHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHH----HccCC--CCHHHHHHHHHHHHHHcCCCCCCCccceeee-CC
Q 011046 178 HPILSECRVFKSDHELALIQFANDISSEAHVEVMK----KTRVG--MKEYQMESMFLHHTYMYGGCRHCSYTCICAT-GE 250 (495)
Q Consensus 178 ~~~i~~lR~vKs~~EI~~~r~Aa~i~~~a~~~~~~----~i~~G--~tE~el~a~~~~~~~~~~G~~~~~~~~iv~s-G~ 250 (495)
...|..++++|...|++.||.|----..|+...+. .+..| +||.+++..++..-.++.+..+.+|.+|.+| |+
T Consensus 298 ~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmglSFeTIS~s~G~ 377 (606)
T KOG2413|consen 298 PSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMGLSFETISSSVGP 377 (606)
T ss_pred cCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccCcCcceeeccCCC
Confidence 34577899999999999998875554455555553 44566 8999999999987777767788999999977 99
Q ss_pred CccccccCCCCCCCCCccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCC-CCCHHH
Q 011046 251 NSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKP-GVCWVD 329 (495)
Q Consensus 251 ~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikp-G~~~~d 329 (495)
|++++||.+ ..-+++.+.+..+.++|-|+.|.-=.+|+|||+.. |+||+++++.|..|+..+-+..+++-| |....-
T Consensus 378 NgAviHYsP-~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~Hf-gePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~ 455 (606)
T KOG2413|consen 378 NGAVIHYSP-PAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHF-GEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSV 455 (606)
T ss_pred CceeeecCC-CccccceecCceEEEEccCcccccCccceeEEEec-CCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcch
Confidence 999999987 23356899999999999999999999999999999 999999999999999999999999877 788888
Q ss_pred HHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccC--cccccCCCCCCCCCCCCCCCCcCCCCCCccCCC
Q 011046 330 MHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG--IDTHDPGGYPKGTERSKEPGLKSLRTVRELQER 407 (495)
Q Consensus 330 v~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iG--l~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~G 407 (495)
++..++..++ +.|+ .|.|++||||| |.+||.|... ++....+...|++|
T Consensus 456 lD~laR~~LW----~~gL----------------Dy~HgTGHGVG~fLnVhE~P~~i---------s~r~~~~~~~l~ag 506 (606)
T KOG2413|consen 456 LDALARSALW----KAGL----------------DYGHGTGHGVGSFLNVHEGPIGI---------GYRPYSSNFPLQAG 506 (606)
T ss_pred hHHHHHHHHH----hhcc----------------ccCCCCCcccccceEeccCCcee---------eeeecCCCchhcCc
Confidence 8888887764 4444 68999999999 9999966322 11112345789999
Q ss_pred CEEEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEEecCC----------eeeCCCCCCCHH
Q 011046 408 MVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANG----------SKNMTSVPREIS 474 (495)
Q Consensus 408 Mv~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte~G----------~e~LT~~p~~~~ 474 (495)
|++++|||.|- .|.+|+|||+.++|.+.+ .|.||-+|.+..
T Consensus 507 ~~~s~EPGYY~--------------------------dg~fGIRienv~~vvd~~~~~~~~~~L~fe~lT~vP~q~k 557 (606)
T KOG2413|consen 507 MVFSIEPGYYK--------------------------DGEFGIRIENVVEVVDAGTKHNFRGFLTFEPLTLVPYQTK 557 (606)
T ss_pred eEeccCCcccc--------------------------cCcceEEEeeEEEEEeccccccccceeeeccceecceecc
Confidence 99999999995 467899999999997654 355675665443
No 37
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=99.82 E-value=1.6e-20 Score=164.09 Aligned_cols=124 Identities=36% Similarity=0.527 Sum_probs=92.3
Q ss_pred CCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCcceeeecCCcccccccCCCceeecCCCCCCeEEEE-EecCCee
Q 011046 12 VPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAI-DIATGKS 90 (495)
Q Consensus 12 ~~~~~y~~R~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~d~~~~f~~~sn~~YLtG~~~~~~~lvl-~~~~g~~ 90 (495)
++.++|.+||++|.+.|.+ ++++|+.|+.+..++ +|..|||||+|||+||||+++|++++++ ...+++.
T Consensus 1 i~~~~~~~RR~~l~~~l~~---------~~~vil~~~~~~~~~-~D~~y~FrQ~s~F~YLTG~~ep~~~lvl~~~~~~~~ 70 (134)
T PF05195_consen 1 IPAEEYAERRKKLAEKLPD---------NSIVILPGGPEKYRS-NDIEYPFRQDSNFYYLTGFNEPDAVLVLKDGESGKS 70 (134)
T ss_dssp -EHHHHHHHHHHHHHHSHS---------SEEEEEE----EEEE-TTEEE-----HHHHHHH---STT-EEEEEECTTEEE
T ss_pred CCHHHHHHHHHHHHHhcCC---------CcEEEEECCCeeeec-CCCccccccCCcEEEEeCCCCCCEEEEEecCCCCeE
Confidence 5789999999999999987 489999999999998 9999999999999999999999999888 5556799
Q ss_pred EEecCCCCcccccccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEE
Q 011046 91 ILFAPRLPPDYAVWLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFL 147 (495)
Q Consensus 91 ~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~i~~ 147 (495)
+||+++.+...+.|.|.+.+.+++++.+++|.+.+.+++.+.|.++++ +..+++.
T Consensus 71 ~LF~~~~d~~~e~W~G~~~~~e~a~~~~gvd~v~~~~~l~~~l~~~~~--~~~~~~~ 125 (134)
T PF05195_consen 71 TLFVPPKDPDDEIWDGPRPGPEEAKEIYGVDEVYYIDELEEVLSELLK--RSRTVYY 125 (134)
T ss_dssp EEEE----CCGHHCCSS--HHHHHHHHHT-SEEEEGGGHHHHHHHHHT--TTSCEEE
T ss_pred EEEeCCCCcCccEECccCCCHHHHHHHhCCCEEEEHHHHHHHHHHHHc--CCCEEEE
Confidence 999999999999999999999999999999999999999999998875 3344544
No 38
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.27 E-value=1.1e-10 Score=113.30 Aligned_cols=149 Identities=16% Similarity=0.189 Sum_probs=124.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcC---------CCCCCCccceeeeCCCcccccc
Q 011046 187 FKSDHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYG---------GCRHCSYTCICATGENSAVLHY 257 (495)
Q Consensus 187 vKs~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~---------G~~~~~~~~iv~sG~~~~~~h~ 257 (495)
+-++.-+..+|-|++|+.++++.+.+.+.||.+-.||...-...+.++- --.+.+||+.+. .|.+.+||
T Consensus 15 ia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Is--vnncv~h~ 92 (398)
T KOG2776|consen 15 IANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSIS--VNNCVCHF 92 (398)
T ss_pred cccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceec--ccceeecc
Confidence 3456667889999999999999999999999999999876555554321 113578887766 67888999
Q ss_pred CCCCCCC-CCccCCCCeEEEEeCeEECceEeeeeeEEEeCCC-----CCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHH
Q 011046 258 GHAAAPN-DRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGK-----FTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMH 331 (495)
Q Consensus 258 ~~~~~p~-~~~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~-----~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~ 331 (495)
.+ ...+ +-.|++||+|.||+|+.++||.+.++.|++| +. .+....++..++..|.+++++.+|||.+-..|-
T Consensus 93 sP-lksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV-~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT 170 (398)
T KOG2776|consen 93 SP-LKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVV-GPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVT 170 (398)
T ss_pred Cc-CCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEe-ccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhh
Confidence 86 3333 5689999999999999999999999999999 43 356888999999999999999999999999999
Q ss_pred HHHHHHHH
Q 011046 332 KLAEKIIL 339 (495)
Q Consensus 332 ~~~~~~~~ 339 (495)
+++.+.+.
T Consensus 171 ~~i~k~aa 178 (398)
T KOG2776|consen 171 RAIVKTAA 178 (398)
T ss_pred HHHHHHHH
Confidence 99988874
No 39
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.08 E-value=3.1e-09 Score=100.75 Aligned_cols=197 Identities=15% Similarity=0.114 Sum_probs=144.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH---cCCC-CCCCccceeeeCCCccccccCCCCCCCCC
Q 011046 191 HELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYM---YGGC-RHCSYTCICATGENSAVLHYGHAAAPNDR 266 (495)
Q Consensus 191 ~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~---~~G~-~~~~~~~iv~sG~~~~~~h~~~~~~p~~~ 266 (495)
....-+|+||.+..++-..+...|+||||-.||...++...++ ++|. .+.+|++-++ -|.+..||.+. .-...
T Consensus 83 ~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG~S--lN~cAAHyTpN-aGd~t 159 (397)
T KOG2775|consen 83 DIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAGIGFPTGCS--LNHCAAHYTPN-AGDKT 159 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccccccCCCccc--ccchhhhcCCC-CCCce
Confidence 3457789999999999999999999999999999998877652 2232 3577876555 57777899861 11235
Q ss_pred ccCCCCeEEEEeCeEECceEeeeeeEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCC
Q 011046 267 TFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGG 346 (495)
Q Consensus 267 ~l~~Gd~v~iD~g~~~~gY~sd~tRT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G 346 (495)
+||.+|++.+|+|...+|-.-|.+.|+.+ .+....+..++.+|-..+|+..---++.+||-++++.++...-.+.+
T Consensus 160 VLqydDV~KiDfGthi~GrIiDsAFTv~F----~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSyEvEi~ 235 (397)
T KOG2775|consen 160 VLKYDDVMKIDFGTHIDGRIIDSAFTVAF----NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESYEVEIN 235 (397)
T ss_pred eeeecceEEEeccccccCeEeeeeeEEee----CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhheEEEeC
Confidence 89999999999999999999999999866 57777889999999999999999999999999999999864211111
Q ss_pred CccCChHHHHHhhccccccccccccccC-cccccCCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcC
Q 011046 347 VMVGNVDEMMAARLGAVFMPHGLGHFLG-IDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEP 414 (495)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~h~~GH~iG-l~~he~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiep 414 (495)
=..-.++ -...-.||+|+ ..+|---. .|. ...+..+.+++|..++||.
T Consensus 236 Gk~~~VK----------pIrnLnGHSI~~yrIH~gks---------VPi-Vkgge~trmee~e~yAIET 284 (397)
T KOG2775|consen 236 GKTYQVK----------PIRNLNGHSIAQYRIHGGKS---------VPI-VKGGEQTRMEEGEIYAIET 284 (397)
T ss_pred Cceecce----------eccccCCCcccceEeecCcc---------cce-ecCCcceeecCCeeEEEEe
Confidence 1000000 01112599998 45553111 121 1335568999999999985
No 40
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=98.59 E-value=5e-08 Score=84.70 Aligned_cols=123 Identities=15% Similarity=0.162 Sum_probs=77.3
Q ss_pred HHHHHHHHhhhhhccCCCCCCeEEEEeCCcceeeecCCcccccccCCCceeecCC---CCCCeEEEEEecCCeeEEecCC
Q 011046 20 NREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGV---REPGFYGAIDIATGKSILFAPR 96 (495)
Q Consensus 20 R~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~d~~~~f~~~sn~~YLtG~---~~~~~~lvl~~~~g~~~l~v~~ 96 (495)
|++|+++.|++. ++ |+++|. +..|++||||| .....++++++.++. +++++.
T Consensus 1 Rl~rl~~~m~~~----gi--d~lll~------------------~~~ni~YltG~~~~~~~~~~~l~i~~~~~-~l~~~~ 55 (132)
T PF01321_consen 1 RLERLRAAMAEA----GI--DALLLT------------------SPENIRYLTGFRWQPGERPVLLVITADGA-VLFVPK 55 (132)
T ss_dssp HHHHHHHHHHHT----T---SEEEEE------------------SHHHHHHHHS--ST-TSSEEEEEEESSSE-EEEEEG
T ss_pred CHHHHHHHHHHC----CC--CEEEEc------------------ChhhceEecCCCcCCCcceEEEEecccCc-EEEecc
Confidence 899999999985 66 555544 24689999999 555566664577777 999986
Q ss_pred CCcccc---c-ccccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCchhhhhhhcc-c-
Q 011046 97 LPPDYA---V-WLGKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFEGMEK-F- 170 (495)
Q Consensus 97 ~~~~~~---~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~l~~-~- 170 (495)
.+.... . +...+..+.+ +.+.+.+.|++.+. ..++||++.. .++...+..+.+ +
T Consensus 56 ~~~~~~~~~~~~~~~v~~~~~-----------~~~~~~~~l~~~~~--~~~~igve~~-------~~~~~~~~~l~~~~~ 115 (132)
T PF01321_consen 56 GEYERAAEESAPDDEVVEYED-----------PYEAIAEALKKLGP--EGKRIGVEPD-------SLSAAEYQRLQEALP 115 (132)
T ss_dssp GGHHHHHHHHTTSSEEEEEST-----------HHHHHHHHHHHHTT--TTSEEEEETT-------TSBHHHHHHHHHHST
T ss_pred ccHHHHHHhhcCCceEEEEec-----------ccchHHHHHHHhCC--CCCEEEEcCC-------cChHHHHHHHHHhCC
Confidence 544321 1 1111111100 24567888887743 3489987542 134455555533 2
Q ss_pred cccccchHHHHHHhhhc
Q 011046 171 ETELNTLHPILSECRVF 187 (495)
Q Consensus 171 ~~~~~d~~~~i~~lR~v 187 (495)
+.+++++++.+..+|+|
T Consensus 116 ~~~~v~~~~~i~~~R~I 132 (132)
T PF01321_consen 116 GAEFVDASPLIEELRMI 132 (132)
T ss_dssp TSEEEEEHHHHHHHHTS
T ss_pred CCEEEEcHHHHHHcCcC
Confidence 46899999999999987
No 41
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=98.36 E-value=2.7e-07 Score=83.24 Aligned_cols=156 Identities=13% Similarity=0.122 Sum_probs=77.5
Q ss_pred CCHHHHHHHHHHHHHHhhhhhccCCCCCCeEEEEeCCcceeeecCCcccccccCCCceeecCCCCCCeEEEEEecCCeeE
Q 011046 12 VPKELYFINREKVLNSLRQHLTETSRPLHGFVLLQGGEEQTRYCTDHLELFRQESYFAYLFGVREPGFYGAIDIATGKSI 91 (495)
Q Consensus 12 ~~~~~y~~R~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~d~~~~f~~~sn~~YLtG~~~~~~~lvl~~~~g~~~ 91 (495)
|+.+.|.+|+++|++.|.+......-+.|+++|+.|.. ..|..|. ++.+-..||+||++|+|++++++ .+.+
T Consensus 1 iD~~~F~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~~-----~e~~~Y~-Ks~aLq~WLlGYEfpdTiiv~tk--~~i~ 72 (163)
T PF14826_consen 1 IDKETFHKRLKRLYSSWKEHKDDLWGGADALVIAVGKA-----DEDNPYS-KSTALQTWLLGYEFPDTIIVFTK--KKIH 72 (163)
T ss_dssp --HHHHHHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S-------TTSTT--HHHHHHHHHHSS--SSEEEEEET--TEEE
T ss_pred CCHHHHHHHHHHHHHHHhccCccccCCCCEEEEEeCCc-----ccCccch-hHHHHHHHHhcccHhhhhhhhcC--CEEE
Confidence 57899999999999999985211123458999998863 2333333 34444569999999999988864 4788
Q ss_pred EecCCCCccccccc------ccCCChhHHHHHhcCceecchhHHHHHHHhcccCCCCCeEEEecCCCCCCCCCCchhhhh
Q 011046 92 LFAPRLPPDYAVWL------GKIKPLSYFQEKYMVNMVYYTDEIVGVLQGHYKEPGKPLLFLLHGLNTDSNNFSKPAQFE 165 (495)
Q Consensus 92 l~v~~~~~~~~~~~------~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 165 (495)
++++++.+..-.-. +...+++.+...- -|.....+.+.+++.. ++. .+++||++.. +...|.++ ..+.+
T Consensus 73 ~ltS~KKa~~L~~l~~~~~~~~~~~v~ll~R~k-~d~~~~~~~f~kl~~~-ik~-~g~~vG~~~K-d~~~G~f~-~~w~~ 147 (163)
T PF14826_consen 73 FLTSKKKAKFLEPLKKPAKEGGSIPVELLVRNK-KDPEKNKANFEKLIEA-IKK-AGKKVGVLAK-DKFEGKFV-DEWKE 147 (163)
T ss_dssp EEEEHHHHHCCCCHCCCTTTT-SSEEEEEEE-T-T-HHHHHHHHHHHHHH-HHC-CTSEEEE-TT-----SHHH-HHHHH
T ss_pred EEeCHHHHHHHHHHhhccccCCCceEEEEEeCC-CCccchHHHHHHHHHH-HHh-cCCeEeEecC-CCCCCchH-HHHHH
Confidence 88876544311100 1111111110000 0000111234444433 333 5788998754 33344333 33444
Q ss_pred hhccccccccchHHH
Q 011046 166 GMEKFETELNTLHPI 180 (495)
Q Consensus 166 ~l~~~~~~~~d~~~~ 180 (495)
.+...+.+.+|++..
T Consensus 148 ~l~~~~~~~vDvs~~ 162 (163)
T PF14826_consen 148 ALKKSGFEKVDVSSG 162 (163)
T ss_dssp HHCHHCSEEEE-HHH
T ss_pred HHhhcCCceeeccCC
Confidence 455445677887764
No 42
>PLN03158 methionine aminopeptidase; Provisional
Probab=96.66 E-value=0.013 Score=60.57 Aligned_cols=55 Identities=16% Similarity=0.181 Sum_probs=45.3
Q ss_pred ceEeeeeeEEEeCCCCC--HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011046 284 FYGSDITCSFPVNGKFT--SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 339 (495)
Q Consensus 284 gY~sd~tRT~~v~G~~~--~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~ 339 (495)
..++++.|+..| ..+. +.+|++.+.+.++++++++.+|||++-.||+.++++.+.
T Consensus 126 ~~~~~~~~~~~I-Ksp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~ 182 (396)
T PLN03158 126 EPNSDLQHSVEI-KTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATI 182 (396)
T ss_pred ccccccccceee-CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Confidence 446777888888 5544 466788999999999999999999999999999887753
No 43
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.13 E-value=0.052 Score=52.13 Aligned_cols=38 Identities=21% Similarity=0.316 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011046 301 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII 338 (495)
Q Consensus 301 ~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~ 338 (495)
+.+|++.+.+.++++++++.++||++..||..++.+.+
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~ 39 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFI 39 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999998887765
No 44
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=95.96 E-value=0.036 Score=53.58 Aligned_cols=88 Identities=14% Similarity=0.260 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccC-ccccc
Q 011046 301 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLG-IDTHD 379 (495)
Q Consensus 301 ~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iG-l~~he 379 (495)
+.+|++....++.++.|..++|||+|-.||+.++.+.+. ++|.-++ +.+-..||.++.-++- .-+|-
T Consensus 123 e~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~I----erg~YPS--------PLnYy~FPKS~CTSVNEviCHG 190 (369)
T KOG2738|consen 123 EGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAII----ERGAYPS--------PLNYYGFPKSVCTSVNEVICHG 190 (369)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHH----hcCCcCC--------CcccCCCchhhhcchhheeecC
Confidence 345778888999999999999999999999999998763 4444332 2222357777665553 12222
Q ss_pred CCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcccc
Q 011046 380 PGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF 418 (495)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~ 418 (495)
+| +.++||.|.+++|...+|.
T Consensus 191 ---IP---------------D~RpLedGDIvNiDVtvY~ 211 (369)
T KOG2738|consen 191 ---IP---------------DSRPLEDGDIVNIDVTVYL 211 (369)
T ss_pred ---CC---------------CcCcCCCCCEEeEEEEEEe
Confidence 11 3578999999999999986
No 45
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=95.41 E-value=0.085 Score=50.93 Aligned_cols=88 Identities=19% Similarity=0.208 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccccCC
Q 011046 302 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPG 381 (495)
Q Consensus 302 ~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~ 381 (495)
..|++-+.+.++++.+.+.++||++..||++.+++++.+ .|..+. ...-+++...+.+.+-|.-
T Consensus 13 k~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~----~ga~pa------------~~gy~g~~~~~ciSvNe~v 76 (255)
T COG0024 13 KMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIRE----KGAYPA------------FLGYKGFPFPTCISVNEVV 76 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH----cCceeh------------hccCcCCCcceEeehhhee
Confidence 456777788888889999999999999999999999853 444321 1111234455555555421
Q ss_pred -CCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcccc
Q 011046 382 -GYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF 418 (495)
Q Consensus 382 -~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~ 418 (495)
++ .+.++.+|++|.++.|..|..+
T Consensus 77 ~Hg-------------iP~d~~vlk~GDiv~IDvg~~~ 101 (255)
T COG0024 77 AHG-------------IPGDKKVLKEGDIVKIDVGAHI 101 (255)
T ss_pred eec-------------CCCCCcccCCCCEEEEEEEEEE
Confidence 11 1125689999999999998875
No 46
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=95.31 E-value=0.14 Score=50.87 Aligned_cols=39 Identities=13% Similarity=0.168 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011046 301 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 339 (495)
Q Consensus 301 ~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~ 339 (495)
+.++++.+.+.++++++++.++||++..||.+.+.+.+.
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~ 40 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIR 40 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHH
Confidence 357888999999999999999999999999999887764
No 47
>PRK12896 methionine aminopeptidase; Reviewed
Probab=94.87 E-value=0.18 Score=48.89 Aligned_cols=49 Identities=18% Similarity=0.194 Sum_probs=39.0
Q ss_pred eeeEEEeCCCCCH--HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011046 289 ITCSFPVNGKFTS--DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII 338 (495)
Q Consensus 289 ~tRT~~v~G~~~~--~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~ 338 (495)
-.|++.| ..+.+ ..|++.+.+.+++.++++.++||++-.||...+...+
T Consensus 4 ~~~~~~v-Ks~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~ 54 (255)
T PRK12896 4 EGRGMEI-KSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRL 54 (255)
T ss_pred cCCceeE-CCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHH
Confidence 3588877 34333 4578888888999999999999999999998887765
No 48
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=94.65 E-value=0.51 Score=43.49 Aligned_cols=99 Identities=15% Similarity=0.086 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccccccCCC-CCCCCCccCCCC
Q 011046 194 ALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGHA-AAPNDRTFEDGD 272 (495)
Q Consensus 194 ~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~h~~~~-~~p~~~~l~~Gd 272 (495)
..++++.+.+.++++.+++.++||++-.|+...+...+.+. |... .+...+.-|..-. .|-.+. ...++.+|++|.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~-g~~~-~~~~~~Gh~iG~~-~~e~~~~~~~~~~~l~~gm 178 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEH-GLGP-NFGHRTGHGIGLE-IHEPPVLKAGDDTVLEPGM 178 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc-Cccc-cCCCCCccccCcc-cCCCCCcCCCCCCCcCCCC
Confidence 46788888999999999999999999999999988877665 5321 1111111111111 121100 011467999999
Q ss_pred eEEEEeCeEEC-ceEeeeeeEEEe
Q 011046 273 MALLDMGAEYQ-FYGSDITCSFPV 295 (495)
Q Consensus 273 ~v~iD~g~~~~-gY~sd~tRT~~v 295 (495)
++.++.+.... ++..-+.-|++|
T Consensus 179 v~~iep~~~~~~~~g~~~ed~v~v 202 (207)
T cd01066 179 VFAVEPGLYLPGGGGVRIEDTVLV 202 (207)
T ss_pred EEEECCEEEECCCcEEEeeeEEEE
Confidence 99999999877 588999999988
No 49
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=93.74 E-value=0.61 Score=48.32 Aligned_cols=39 Identities=21% Similarity=0.305 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 011046 302 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILE 340 (495)
Q Consensus 302 ~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~ 340 (495)
..+++-+.+.++++.+++.++||++..||.+.+.+.+.+
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~ 59 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIME 59 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 456777788888888999999999999999999888865
No 50
>PRK05716 methionine aminopeptidase; Validated
Probab=93.63 E-value=0.8 Score=44.26 Aligned_cols=96 Identities=11% Similarity=0.128 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCC-CccceeeeCCC----ccccccCCCCCCCCCccCC
Q 011046 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHC-SYTCICATGEN----SAVLHYGHAAAPNDRTFED 270 (495)
Q Consensus 196 ~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~-~~~~iv~sG~~----~~~~h~~~~~~p~~~~l~~ 270 (495)
.|++.+++.++.+++++.++||++-.||...+...+.+. |.... .+... .-|.. ..+++|.. ..++.+|++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~-g~~~~~~~~GH-giG~~~~e~p~~~~~~~--~~~~~~le~ 195 (252)
T PRK05716 120 DKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAE-GFSVVREYCGH-GIGRKFHEEPQIPHYGA--PGDGPVLKE 195 (252)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCeeecCcccc-ccCCccCCCCccCcCCC--CCCCCEecC
Confidence 456677777888999999999999999999988877665 54311 11000 00111 11111111 124678999
Q ss_pred CCeEEEEeCeEE------------------CceEeeeeeEEEe
Q 011046 271 GDMALLDMGAEY------------------QFYGSDITCSFPV 295 (495)
Q Consensus 271 Gd~v~iD~g~~~------------------~gY~sd~tRT~~v 295 (495)
|+++.++.+... +++..-+.-|+.|
T Consensus 196 Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~V 238 (252)
T PRK05716 196 GMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAV 238 (252)
T ss_pred CCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEE
Confidence 999999987753 4577778888888
No 51
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=93.47 E-value=1 Score=43.39 Aligned_cols=97 Identities=9% Similarity=0.128 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCC-Ccc--cee-eeCCCccccccCCCCCCCCCccCCC
Q 011046 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHC-SYT--CIC-ATGENSAVLHYGHAAAPNDRTFEDG 271 (495)
Q Consensus 196 ~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~-~~~--~iv-~sG~~~~~~h~~~~~~p~~~~l~~G 271 (495)
++++..++.++++.+++.++||++-.++...+...+.+. |.... .+. .+- ...+...++++.. ..++.+|++|
T Consensus 118 ~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~-g~~~~~~~~GHgiG~~~~e~p~i~~~~~--~~~~~~l~~g 194 (247)
T TIGR00500 118 AEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAK-GFSVVREYCGHGIGRKFHEEPQIPNYGK--KFTNVRLKEG 194 (247)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCEeccCccCCccCcccCCCCccCCcCc--CCCCCEecCC
Confidence 456677777888999999999999999999888776655 43211 110 000 0001111111110 1146789999
Q ss_pred CeEEEEeCeEE------------------CceEeeeeeEEEe
Q 011046 272 DMALLDMGAEY------------------QFYGSDITCSFPV 295 (495)
Q Consensus 272 d~v~iD~g~~~------------------~gY~sd~tRT~~v 295 (495)
+++.++.|... +++..-+.-|+.|
T Consensus 195 mv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~V 236 (247)
T TIGR00500 195 MVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVI 236 (247)
T ss_pred CEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEE
Confidence 99999988654 3467778888888
No 52
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=92.24 E-value=2.5 Score=39.26 Aligned_cols=97 Identities=16% Similarity=0.153 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccc-cccCCCC-CCCCCccCCCC
Q 011046 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAV-LHYGHAA-APNDRTFEDGD 272 (495)
Q Consensus 195 ~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~-~h~~~~~-~p~~~~l~~Gd 272 (495)
.+|++...+.++++.+++.++||++-.||.+.+...+.+. |... .|... .|..-.+ .|-.+.- .-++.+|++|.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~-g~~~-~~~~~--~Gh~iG~~~~e~p~i~~~~~~~l~~gm 179 (208)
T cd01092 104 ELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEA-GYGE-YFIHR--TGHGVGLEVHEAPYISPGSDDVLEEGM 179 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-Cccc-cCCCC--CccccCcccCcCCCcCCCCCCCcCCCC
Confidence 4567888888899999999999999999998888776655 5421 12111 1111100 1111000 11568899999
Q ss_pred eEEEEeCeEECc-eEeeeeeEEEe
Q 011046 273 MALLDMGAEYQF-YGSDITCSFPV 295 (495)
Q Consensus 273 ~v~iD~g~~~~g-Y~sd~tRT~~v 295 (495)
++.++.+....| +..-+.-|++|
T Consensus 180 v~~iep~~~~~~~~g~~~ed~v~v 203 (208)
T cd01092 180 VFTIEPGIYIPGKGGVRIEDDVLV 203 (208)
T ss_pred EEEECCeEEecCCCEEEeeeEEEE
Confidence 999998886544 45557777877
No 53
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=91.96 E-value=1.6 Score=45.30 Aligned_cols=98 Identities=17% Similarity=0.170 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccccccCC---CCCC-CCCccCC
Q 011046 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAVLHYGH---AAAP-NDRTFED 270 (495)
Q Consensus 195 ~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~~h~~~---~~~p-~~~~l~~ 270 (495)
.++++.+++.++.+++++.++||++-.|+.+.+...+.+. |.....+.. -.-|-.. .+++.. ...| ++.+|++
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~-G~~~~h~~G-hgiGl~~-~~~~~e~~~~l~~~~~~~L~~ 347 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKY-GIHKDSRTG-YPIGLSY-PPDWGERTMSLRPGDNTVLKP 347 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCccCCCce-eeeccCc-CCCCCCccccccCCCCceecC
Confidence 3567788888999999999999999999999888776654 543211100 0111111 011100 0011 4678999
Q ss_pred CCeEEEEeCeEECceEeeeeeEEEe
Q 011046 271 GDMALLDMGAEYQFYGSDITCSFPV 295 (495)
Q Consensus 271 Gd~v~iD~g~~~~gY~sd~tRT~~v 295 (495)
|.++.++-|....|+..-+.-|++|
T Consensus 348 GMv~tvEpgiy~~~~Gvried~v~V 372 (391)
T TIGR02993 348 GMTFHFMTGLWMEDWGLEITESILI 372 (391)
T ss_pred CCEEEEcceeEeCCCCeEEeeEEEE
Confidence 9999999999877777788888888
No 54
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=91.75 E-value=1.9 Score=41.71 Aligned_cols=99 Identities=16% Similarity=0.091 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCC-CccceeeeCCCccccccCCC-CCC-CCCccCCC
Q 011046 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHC-SYTCICATGENSAVLHYGHA-AAP-NDRTFEDG 271 (495)
Q Consensus 195 ~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~-~~~~iv~sG~~~~~~h~~~~-~~p-~~~~l~~G 271 (495)
..|++..++.++.+++++.+|||++-.++...+...+.+. +.... .|..-+.-|..-. .|=.+. ..+ ++++|++|
T Consensus 120 ~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~-~~~~~~~~~~~~GHgiGle-~hE~~~~l~~~~~~~L~~G 197 (243)
T cd01091 120 EQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKK-KPELEPNFTKNLGFGIGLE-FRESSLIINAKNDRKLKKG 197 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHh-ChhHHHhCcCCcccccCcc-cccCccccCCCCCCCcCCC
Confidence 4566778888899999999999999999998887776654 31111 1111111110000 110000 001 46789999
Q ss_pred CeEEEEeCeE-E----------CceEeeeeeEEEe
Q 011046 272 DMALLDMGAE-Y----------QFYGSDITCSFPV 295 (495)
Q Consensus 272 d~v~iD~g~~-~----------~gY~sd~tRT~~v 295 (495)
.++.++.|.. + +.|..-++-|+.|
T Consensus 198 Mvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~V 232 (243)
T cd01091 198 MVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILV 232 (243)
T ss_pred CEEEEeCCcccccCccccCccCCeeEEEEEEEEEE
Confidence 9999999985 2 3688899999998
No 55
>PRK12897 methionine aminopeptidase; Reviewed
Probab=91.69 E-value=1.5 Score=42.44 Aligned_cols=95 Identities=8% Similarity=0.093 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCc------cccccCCCCCCCCCccC
Q 011046 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENS------AVLHYGHAAAPNDRTFE 269 (495)
Q Consensus 196 ~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~------~~~h~~~~~~p~~~~l~ 269 (495)
.|++.+++..+++.+++.++||++-.++...+...+.+. |... +...+.=|... .+.++.. ..+..+|+
T Consensus 119 ~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~-g~~~--~~~~~GHgiGl~~hE~P~i~~~~~--~~~~~~l~ 193 (248)
T PRK12897 119 AEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANE-GFSV--ARDFTGHGIGKEIHEEPAIFHFGK--QGQGPELQ 193 (248)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHc-CCcc--CCCeEECccCCcccCCCccCCCCC--CCCCCCcC
Confidence 455667777888999999999999999998888777655 4321 11111111111 1111110 01346899
Q ss_pred CCCeEEEEeCeE-----------------ECc-eEeeeeeEEEe
Q 011046 270 DGDMALLDMGAE-----------------YQF-YGSDITCSFPV 295 (495)
Q Consensus 270 ~Gd~v~iD~g~~-----------------~~g-Y~sd~tRT~~v 295 (495)
+|.++.++-|.. ++| +...+.-|+.|
T Consensus 194 ~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~V 237 (248)
T PRK12897 194 EGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAI 237 (248)
T ss_pred CCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEE
Confidence 999999998876 234 67788888888
No 56
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=91.24 E-value=3.1 Score=39.70 Aligned_cols=96 Identities=10% Similarity=-0.023 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccc-cccCCC------CCCCCCcc
Q 011046 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAV-LHYGHA------AAPNDRTF 268 (495)
Q Consensus 196 ~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~-~h~~~~------~~p~~~~l 268 (495)
.|++.+++.++++++++.+|||++-.|+.+.+...+.+. |...... ...|..-.+ .|..+. ..-++.+|
T Consensus 111 ~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~-G~~~~~~---~~~GHgiGl~~he~~~~~g~~~~~~~~~~L 186 (228)
T cd01090 111 HLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREH-DLLRYRT---FGYGHSFGVLSHYYGREAGLELREDIDTVL 186 (228)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCCcccc---cccCcccccccccCCCccccccCCCCCCcc
Confidence 567778888999999999999999999999988877665 5332100 111111111 121100 01145889
Q ss_pred CCCCeEEEEeCeEEC----c-eEeeeeeEEEe
Q 011046 269 EDGDMALLDMGAEYQ----F-YGSDITCSFPV 295 (495)
Q Consensus 269 ~~Gd~v~iD~g~~~~----g-Y~sd~tRT~~v 295 (495)
++|.++.++-+..+. | ..--+..|+.|
T Consensus 187 e~GMV~~iEP~i~~~~~~~g~gG~ried~v~V 218 (228)
T cd01090 187 EPGMVVSMEPMIMLPEGQPGAGGYREHDILVI 218 (228)
T ss_pred CCCCEEEECCEEeecccCCCCcEEEeeeEEEE
Confidence 999999999988752 2 24447888887
No 57
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=91.20 E-value=2.5 Score=44.58 Aligned_cols=88 Identities=17% Similarity=0.174 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccccCCC
Q 011046 303 QSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGG 382 (495)
Q Consensus 303 ~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~~~ 382 (495)
.+++-+.+..+.+.+.+.++||++..||.+.+...+.+.+.+.|... + .-||. ++++. +..++
T Consensus 161 ~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~---------g---~aFPt----~vS~N-~~aaH 223 (470)
T PTZ00053 161 LRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKC---------G---WAFPT----GCSLN-HCAAH 223 (470)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcc---------c---CCCCc----eeecC-ccccC
Confidence 45666677777888888999999999999988877655334434310 0 01222 22221 11111
Q ss_pred CCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcccc
Q 011046 383 YPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYF 418 (495)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~ 418 (495)
+. | +..++++|+.|.++.|+.|+..
T Consensus 224 ~t--------P---~~gd~~vLk~GDvVkID~G~~v 248 (470)
T PTZ00053 224 YT--------P---NTGDKTVLTYDDVCKLDFGTHV 248 (470)
T ss_pred CC--------C---CCCCCcEecCCCeEEEEEeEEE
Confidence 21 0 1124578999999999998764
No 58
>PRK12318 methionine aminopeptidase; Provisional
Probab=90.62 E-value=3.1 Score=41.31 Aligned_cols=84 Identities=13% Similarity=0.142 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCC-CccceeeeCC----CccccccCCCCCCCCCccC
Q 011046 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHC-SYTCICATGE----NSAVLHYGHAAAPNDRTFE 269 (495)
Q Consensus 195 ~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~-~~~~iv~sG~----~~~~~h~~~~~~p~~~~l~ 269 (495)
.+|++..++.++++.+++.++||++-.++...+...+.+. |.... .|... .-|- ...++++.. -++.+|+
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~-G~~~~~~~~GH-gIGl~~hE~P~i~~~~~---~~~~~L~ 233 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKY-GFSVVDQFVGH-GVGIKFHENPYVPHHRN---SSKIPLA 233 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCccCCCcccC-CcCccccCCCcccCcCC---CCCCEeC
Confidence 3567788888899999999999999999999888777655 43211 11000 0111 111111110 1346799
Q ss_pred CCCeEEEEeCeEEC
Q 011046 270 DGDMALLDMGAEYQ 283 (495)
Q Consensus 270 ~Gd~v~iD~g~~~~ 283 (495)
+|.++.++-+....
T Consensus 234 ~GMV~~iEP~i~~~ 247 (291)
T PRK12318 234 PGMIFTIEPMINVG 247 (291)
T ss_pred CCCEEEECCEEEcC
Confidence 99999998776543
No 59
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=90.55 E-value=2.7 Score=39.98 Aligned_cols=91 Identities=12% Similarity=0.071 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCC---CCC---CccceeeeCCCccccccCCCCCCCCCcc
Q 011046 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGC---RHC---SYTCICATGENSAVLHYGHAAAPNDRTF 268 (495)
Q Consensus 195 ~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~---~~~---~~~~iv~sG~~~~~~h~~~~~~p~~~~l 268 (495)
..+++.+.+.++.+++++.++||++-.||...+...+.+. |+ ... ...-.+..+++.. . -...|
T Consensus 121 ~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~-G~~~~~~~~~h~~g~~~~~~~~~~--------~-~~~~l 190 (228)
T cd01089 121 KKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDY-GCTPVEGVLSHQLKRVVSSGEGKA--------K-LVECV 190 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHc-CCEEecCccccCcCceEecCCCCc--------c-chhhc
Confidence 4667788888899999999999999999999888777665 52 110 0011122221110 0 13569
Q ss_pred CCCCeEEEEeCeEECc-eEeeeeeEEEe
Q 011046 269 EDGDMALLDMGAEYQF-YGSDITCSFPV 295 (495)
Q Consensus 269 ~~Gd~v~iD~g~~~~g-Y~sd~tRT~~v 295 (495)
++|.++.++.+....| +.+-+.-|+.|
T Consensus 191 ~~gmvf~~ep~~~~~g~~~~~~~~Tv~v 218 (228)
T cd01089 191 KHGLLFPYPVLYEKEGEVVAQFKLTVLL 218 (228)
T ss_pred cCCcccccceeEccCCCeEEEEEEEEEE
Confidence 9999999999988655 88999999998
No 60
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=90.18 E-value=4.1 Score=37.85 Aligned_cols=96 Identities=16% Similarity=0.115 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCcccee--eeCCCcc--ccccCCCCCCCCCccCCC
Q 011046 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCIC--ATGENSA--VLHYGHAAAPNDRTFEDG 271 (495)
Q Consensus 196 ~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv--~sG~~~~--~~h~~~~~~p~~~~l~~G 271 (495)
.+++.+.+.++++.+++.++||+|-.|+.+.+...+.+. |.. ..+...+ .-|.... .|.... .-++.+|++|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~-g~~-~~~~~~~GH~iG~~~~~~~P~i~~--~~~~~~l~~g 179 (207)
T PF00557_consen 104 QRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEY-GLE-EPYPHGLGHGIGLEFHEPGPNIAR--PGDDTVLEPG 179 (207)
T ss_dssp HHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHT-TEG-EEBTSSSEEEESSSSSEEEEEESS--TTTSSB--TT
T ss_pred ccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhh-ccc-ceeeecccccccccccccceeeec--ccccceecCC
Confidence 677778888899999999999999999999999888765 541 1111111 1221111 122110 1157799999
Q ss_pred CeEEEEeCeE-ECce-EeeeeeEEEe
Q 011046 272 DMALLDMGAE-YQFY-GSDITCSFPV 295 (495)
Q Consensus 272 d~v~iD~g~~-~~gY-~sd~tRT~~v 295 (495)
.++.++.+.. ..|. ..-+.-|+.|
T Consensus 180 mv~~iep~~~~~~~~~g~~~ed~v~V 205 (207)
T PF00557_consen 180 MVFAIEPGLYFIPGWGGVRFEDTVLV 205 (207)
T ss_dssp BEEEEEEEEEEETTSEEEEEBEEEEE
T ss_pred CceeEeeeEEccCCCcEEEEEEEEEE
Confidence 9999999875 3333 6666666666
No 61
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=89.21 E-value=3.9 Score=40.74 Aligned_cols=39 Identities=15% Similarity=0.147 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011046 301 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 339 (495)
Q Consensus 301 ~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~ 339 (495)
+..+++-+.+.++++.+++.++||++..||.+.+.+.+.
T Consensus 6 ~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~ 44 (295)
T TIGR00501 6 EKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIR 44 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHH
Confidence 345777888889999999999999999999999887764
No 62
>PRK09795 aminopeptidase; Provisional
Probab=88.84 E-value=6.1 Score=40.45 Aligned_cols=102 Identities=17% Similarity=0.167 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccc-cccCCCCCC-CCCc
Q 011046 190 DHELALIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAV-LHYGHAAAP-NDRT 267 (495)
Q Consensus 190 ~~EI~~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~-~h~~~~~~p-~~~~ 267 (495)
+++.+.++++-+++.++.+++++.++||++-.|+.+.+...+.+. |... .|.- ..|..-.+ .|-.+.-.| ++.+
T Consensus 236 ~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~-g~~~-~~~h--~~GHgiGl~~he~p~i~~~~~~~ 311 (361)
T PRK09795 236 SAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEA-GYGD-YFGH--NTGHAIGIEVHEDPRFSPRDTTT 311 (361)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCCc-cCCC--CCCccCCccccCCCCcCCCCCCC
Confidence 455456788999999999999999999999999999888877665 4321 1110 11111111 121110011 4678
Q ss_pred cCCCCeEEEEeCeEECce-EeeeeeEEEe
Q 011046 268 FEDGDMALLDMGAEYQFY-GSDITCSFPV 295 (495)
Q Consensus 268 l~~Gd~v~iD~g~~~~gY-~sd~tRT~~v 295 (495)
|++|.++.++-|....|. ..-+.-|++|
T Consensus 312 l~~gmv~~iEpgiy~~~~~gvriEd~v~v 340 (361)
T PRK09795 312 LQPGMLLTVEPGIYLPGQGGVRIEDVVLV 340 (361)
T ss_pred cCCCCEEEECCEEEeCCCCEEEEeeEEEE
Confidence 999999999999876543 4566778877
No 63
>PRK07281 methionine aminopeptidase; Reviewed
Probab=88.73 E-value=3.9 Score=40.47 Aligned_cols=82 Identities=15% Similarity=0.165 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceee--eCCC----ccccccCCCCCCCCCccC
Q 011046 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICA--TGEN----SAVLHYGHAAAPNDRTFE 269 (495)
Q Consensus 196 ~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~--sG~~----~~~~h~~~~~~p~~~~l~ 269 (495)
.|++.+++.++++++++.++||++-.+|...+...+.+. |... +...+. -|.. ..++++.. ..++.+|+
T Consensus 150 ~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~-G~~~--~~~~~GHGIGl~~hE~P~i~~~~~--~~~~~~Le 224 (286)
T PRK07281 150 VKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESR-GYGV--VRDLVGHGVGPTMHEEPMVPNYGT--AGRGLRLR 224 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHc-CCcc--CCCeeeeeCCCccCCCCcCCCccc--CCCCCEEC
Confidence 577888888999999999999999999999887776554 4321 111111 1111 00111110 01356899
Q ss_pred CCCeEEEEeCeEE
Q 011046 270 DGDMALLDMGAEY 282 (495)
Q Consensus 270 ~Gd~v~iD~g~~~ 282 (495)
+|.++.++-|...
T Consensus 225 ~GMV~tiEPgiy~ 237 (286)
T PRK07281 225 EGMVLTIEPMINT 237 (286)
T ss_pred CCCEEEECCeeEc
Confidence 9999999999854
No 64
>PRK08671 methionine aminopeptidase; Provisional
Probab=88.45 E-value=8 Score=38.37 Aligned_cols=95 Identities=17% Similarity=0.104 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCcc--ccccCCC----CCCCCCccC
Q 011046 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSA--VLHYGHA----AAPNDRTFE 269 (495)
Q Consensus 196 ~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~--~~h~~~~----~~p~~~~l~ 269 (495)
.+++.+.+..+++.+++.++||++-.|+.+.++..+.+. |.... ... +|..-. ..|-... ...++.+|+
T Consensus 103 ~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~-G~~~~--~~~--~GHgiG~~~~he~p~ip~~~~~~~~~le 177 (291)
T PRK08671 103 YEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSY-GFKPI--RNL--TGHGLERYELHAGPSIPNYDEGGGVKLE 177 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc-CCccc--CCC--cccCcCCCcccCCCccCccCCCCCceeC
Confidence 356777777889999999999999999999888776654 54321 011 111111 1221110 011467899
Q ss_pred CCCeEEEEeCeE-ECceEeeeeeEEEe
Q 011046 270 DGDMALLDMGAE-YQFYGSDITCSFPV 295 (495)
Q Consensus 270 ~Gd~v~iD~g~~-~~gY~sd~tRT~~v 295 (495)
+|+++.++.... -.|+..|-.||-..
T Consensus 178 ~GmV~aIEp~~t~G~G~v~~~~~~~iy 204 (291)
T PRK08671 178 EGDVYAIEPFATDGEGKVVEGPEVEIY 204 (291)
T ss_pred CCCEEEEcceEECCCCeEecCCceEEE
Confidence 999999998765 35888888777654
No 65
>PRK15173 peptidase; Provisional
Probab=87.77 E-value=6 Score=39.90 Aligned_cols=97 Identities=10% Similarity=0.020 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCcc---ccccCCCC-CCCCCccCC
Q 011046 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSA---VLHYGHAA-APNDRTFED 270 (495)
Q Consensus 195 ~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~---~~h~~~~~-~p~~~~l~~ 270 (495)
..|++..++.++++++++.++||++-.++.+.+...+.+. |.... +.. ..|..-. -.|-.+.. ..++.+|++
T Consensus 203 ~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~-G~~~~-~~~--~~GHGiG~~lg~~E~P~i~~~~~~~Le~ 278 (323)
T PRK15173 203 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKS-GLPNY-NRG--HLGHGNGVFLGLEESPFVSTHATESFTS 278 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCccc-cCC--CCCCcCCCCCCcCCCCCCCCCCCCccCC
Confidence 4567788888999999999999999999999887777655 54311 100 0111111 01211101 124678999
Q ss_pred CCeEEEEeCeEE-CceEeeeeeEEEe
Q 011046 271 GDMALLDMGAEY-QFYGSDITCSFPV 295 (495)
Q Consensus 271 Gd~v~iD~g~~~-~gY~sd~tRT~~v 295 (495)
|.++.++.|... +.+..-+.-|+.|
T Consensus 279 GMV~tiEPgiy~~g~ggvriEDtvlV 304 (323)
T PRK15173 279 GMVLSLETPYYGYNLGSIMIEDMILI 304 (323)
T ss_pred CCEEEECCEEEcCCCcEEEEeeEEEE
Confidence 999999988753 3345678888888
No 66
>PRK14575 putative peptidase; Provisional
Probab=87.50 E-value=5.3 Score=41.72 Aligned_cols=97 Identities=10% Similarity=0.013 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCcc---ccccCCCCC-CCCCccCC
Q 011046 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSA---VLHYGHAAA-PNDRTFED 270 (495)
Q Consensus 195 ~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~---~~h~~~~~~-p~~~~l~~ 270 (495)
..|++.+++.++..++++.+|||++-.++.+.+...+.+. |.... +.. ..|..-. -.|-.+... -++.+|++
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~-G~~~~-~~~--~~GHGiG~~lg~~e~P~i~~~~~~~Le~ 361 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKS-GLPNY-NRG--HLGHGNGVFLGLEESPFVSTHATESFTS 361 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCccc-cCC--CCCCcccCCCCCccCCCCCCCCCCCcCC
Confidence 3467777888999999999999999999999888777655 54321 100 0111111 011111001 14678999
Q ss_pred CCeEEEEeCeEEC-ceEeeeeeEEEe
Q 011046 271 GDMALLDMGAEYQ-FYGSDITCSFPV 295 (495)
Q Consensus 271 Gd~v~iD~g~~~~-gY~sd~tRT~~v 295 (495)
|.++.++.|.... .+..-+.-|+.|
T Consensus 362 GMv~tiEpgiy~~g~gGvriEDtvlV 387 (406)
T PRK14575 362 GMVLSLETPYYGYNLGSIMIEDMILI 387 (406)
T ss_pred CCEEEECCeeecCCCcEEEEEeEEEE
Confidence 9999999887643 355778889988
No 67
>PRK14576 putative endopeptidase; Provisional
Probab=86.66 E-value=7.9 Score=40.40 Aligned_cols=97 Identities=15% Similarity=0.017 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccc---cccCCCCC-CCCCccCC
Q 011046 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAV---LHYGHAAA-PNDRTFED 270 (495)
Q Consensus 195 ~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~---~h~~~~~~-p~~~~l~~ 270 (495)
..+++.+++.++.+++++.+|||++-.++...+...+.+. |.... +.. ..|..-.. .|..+... -++.+|++
T Consensus 285 ~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~-G~~~~-~~~--~~GHgiG~~l~~~e~P~i~~~~~~~Le~ 360 (405)
T PRK14576 285 LTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTS-GLPHY-NRG--HLGHGDGVFLGLEEVPFVSTQATETFCP 360 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-CCccc-cCC--CCCCCCCCCCCcCcCCCcCCCCCCccCC
Confidence 4667788888999999999999999999999888776655 54321 100 11111110 01111011 14678999
Q ss_pred CCeEEEEeCeEECc-eEeeeeeEEEe
Q 011046 271 GDMALLDMGAEYQF-YGSDITCSFPV 295 (495)
Q Consensus 271 Gd~v~iD~g~~~~g-Y~sd~tRT~~v 295 (495)
|.++.++.|....| ...-+.-|+.|
T Consensus 361 GMv~~vEp~~y~~g~ggvriEDtvlV 386 (405)
T PRK14576 361 GMVLSLETPYYGIGVGSIMLEDMILI 386 (405)
T ss_pred CCEEEECCceeecCCCEEEEeeEEEE
Confidence 99999997765433 34557888888
No 68
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=86.22 E-value=9.3 Score=36.61 Aligned_cols=100 Identities=12% Similarity=0.022 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcC---CCCC------------CCccceeeeCCCccc-cccC
Q 011046 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYG---GCRH------------CSYTCICATGENSAV-LHYG 258 (495)
Q Consensus 195 ~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~---G~~~------------~~~~~iv~sG~~~~~-~h~~ 258 (495)
..+++...+.++++.+++.++||++-.++.+.+...+.+.+ |... ..|.+. ..|..-.+ +|-.
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h-~~GhgiGl~~~e~ 182 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPH-GLGHYLGLDVHDV 182 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCC-CCccccCcccccC
Confidence 34566777778899999999999999999888776664331 1100 011000 01111001 1200
Q ss_pred CC---CCCCCCccCCCCeEEEEeCeEECc-----------eEeeeeeEEEe
Q 011046 259 HA---AAPNDRTFEDGDMALLDMGAEYQF-----------YGSDITCSFPV 295 (495)
Q Consensus 259 ~~---~~p~~~~l~~Gd~v~iD~g~~~~g-----------Y~sd~tRT~~v 295 (495)
+. ...++.+|++|.++.++.|....+ +..-+.-|++|
T Consensus 183 p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~V 233 (243)
T cd01087 183 GGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLV 233 (243)
T ss_pred ccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEE
Confidence 00 011467899999999999987654 77788889988
No 69
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=85.72 E-value=8.3 Score=39.85 Aligned_cols=96 Identities=18% Similarity=0.117 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCcc---ccccCC-CCCC-CCCccCC
Q 011046 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSA---VLHYGH-AAAP-NDRTFED 270 (495)
Q Consensus 196 ~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~---~~h~~~-~~~p-~~~~l~~ 270 (495)
.|+.-.++.+|++++++.++||++-.++.+.....+.+. |.. ..|.. ..|..-. -.|=.+ ...| ++..|++
T Consensus 264 ~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~-g~~-~~~~h--~~GHgvG~~l~vhE~p~~~~~~~~~~L~~ 339 (384)
T COG0006 264 QREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKA-GYG-LYFLH--GTGHGVGFVLDVHEHPQYLSPGSDTTLEP 339 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhc-CCc-ccccC--CccccCCCCcccCcCccccCCCCCccccC
Confidence 357778888999999999999999999998888777664 321 11110 0111111 112110 0112 5678999
Q ss_pred CCeEEEEeCeE-ECceEeeeeeEEEe
Q 011046 271 GDMALLDMGAE-YQFYGSDITCSFPV 295 (495)
Q Consensus 271 Gd~v~iD~g~~-~~gY~sd~tRT~~v 295 (495)
|.++.++-|.. .+.+..-|..+++|
T Consensus 340 GMv~t~Epg~y~~g~~GirIEd~vlV 365 (384)
T COG0006 340 GMVFSIEPGIYIPGGGGVRIEDTVLV 365 (384)
T ss_pred CcEEEeccccccCCCceEEEEEEEEE
Confidence 99999999965 46799999999999
No 70
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=84.86 E-value=6.7 Score=38.41 Aligned_cols=91 Identities=16% Similarity=0.216 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccc-c
Q 011046 301 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTH-D 379 (495)
Q Consensus 301 ~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~h-e 379 (495)
.+.|+..++=+++...+..-+|||++.-||.+..++...+-+.+.|+ .-++|+..|+... .
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl------------------~aGi~FPtG~SlN~c 147 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGL------------------NAGIGFPTGCSLNHC 147 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccc------------------cccccCCCcccccch
Confidence 34566666667777788889999999999999888876654455554 1245666665533 2
Q ss_pred CCCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCcccccc
Q 011046 380 PGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFID 420 (495)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~ 420 (495)
...|. .++++.++|+...|.-|.-|..+..
T Consensus 148 AAHyT-----------pNaGd~tVLqydDV~KiDfGthi~G 177 (397)
T KOG2775|consen 148 AAHYT-----------PNAGDKTVLKYDDVMKIDFGTHIDG 177 (397)
T ss_pred hhhcC-----------CCCCCceeeeecceEEEeccccccC
Confidence 22232 1445678999999999988876533
No 71
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=75.46 E-value=23 Score=35.75 Aligned_cols=110 Identities=15% Similarity=0.218 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhCCCccCChHHHHHhhccccccccccccccCcccccC-
Q 011046 302 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDP- 380 (495)
Q Consensus 302 ~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~h~~GH~iGl~~he~- 380 (495)
..+.+-+.+..+....++.++||++..||.....+.|-+.. |= +++.. +-|-.|+....-+.+..+
T Consensus 23 KYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t---~k-------iYK~e---K~~~KGIAfPT~Isvnncv 89 (398)
T KOG2776|consen 23 KYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEET---GK-------IYKKE---KDFEKGIAFPTSISVNNCV 89 (398)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHH---HH-------HHhhh---hhhhccccccceeccccee
Confidence 34555677888888889999999999999988888775432 11 11110 123344444444444431
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCccCCCCEEEEcCccccccccccccccccccccccchhhhcccCCcceeEEceEEEEec
Q 011046 381 GGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTA 460 (495)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~l~~GMv~tiepg~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gvrieD~vlVte 460 (495)
.+|.+.. ...+..|++|.|+-|.-|+-+ .|+ -.-+.+|++|++
T Consensus 90 ~h~sPlk----------sd~~~~Lk~GDvVKIdLG~Hi--------------------------DGf-iA~vaHT~VV~~ 132 (398)
T KOG2776|consen 90 CHFSPLK----------SDADYTLKEGDVVKIDLGVHI--------------------------DGF-IALVAHTIVVGP 132 (398)
T ss_pred eccCcCC----------CCCcccccCCCEEEEEeeeee--------------------------ccc-eeeeeeeEEecc
Confidence 1221111 112578999999999999876 344 567899999986
Q ss_pred C
Q 011046 461 N 461 (495)
Q Consensus 461 ~ 461 (495)
.
T Consensus 133 ~ 133 (398)
T KOG2776|consen 133 A 133 (398)
T ss_pred C
Confidence 4
No 72
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=75.36 E-value=19 Score=34.13 Aligned_cols=37 Identities=8% Similarity=-0.065 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCC--CCHHHHHHHHHHHH
Q 011046 302 DQSLIYNAVLKAHNAVINAMKPG--VCWVDMHKLAEKII 338 (495)
Q Consensus 302 ~~~~~~~~~~~a~~~~~~~ikpG--~~~~dv~~~~~~~~ 338 (495)
.+.+--..+.++.+.+.+.++|| ++-.||.+.+.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~ 43 (224)
T cd01085 5 AHIRDGVALVEFLAWLEQEVPKGETITELSAADKLEEFR 43 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCEeHHHHHHHHHHHH
Confidence 44444555668888899999999 99999999987765
No 73
>PRK10879 proline aminopeptidase P II; Provisional
Probab=65.72 E-value=57 Score=34.42 Aligned_cols=37 Identities=11% Similarity=0.053 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 011046 302 DQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKII 338 (495)
Q Consensus 302 ~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~ 338 (495)
..|++.+.+..++.++++.++||++-.||...+...+
T Consensus 181 ~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~ 217 (438)
T PRK10879 181 VLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEF 217 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 3456677788888899999999999999988776654
No 74
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=48.57 E-value=82 Score=28.87 Aligned_cols=39 Identities=10% Similarity=0.171 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 011046 301 SDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIIL 339 (495)
Q Consensus 301 ~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~~~~~~~~ 339 (495)
++|+..-..+.+-..+.+...-|..+..+-.+...+.+.
T Consensus 115 ~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~ 153 (200)
T PF07305_consen 115 PEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLT 153 (200)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHH
Confidence 778888999999999999999999999988777766653
No 75
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=39.81 E-value=1.6e+02 Score=32.95 Aligned_cols=94 Identities=19% Similarity=0.119 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC-CC------CccceeeeCCCccccccCCCCCCCCCcc
Q 011046 196 IQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCR-HC------SYTCICATGENSAVLHYGHAAAPNDRTF 268 (495)
Q Consensus 196 ~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~-~~------~~~~iv~sG~~~~~~h~~~~~~p~~~~l 268 (495)
|.+|-..--.+.++++..++||..-.++-......+.++ +-+ .+ +|..-+-+-.++..... -++++|
T Consensus 259 mq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~-~Pel~~~~~k~lG~~iGlEFREssl~ina-----Knd~~l 332 (960)
T KOG1189|consen 259 MQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKN-KPELVPNFTKNLGFGIGLEFRESSLVINA-----KNDRVL 332 (960)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhc-Ccchhhhhhhhcccccceeeecccccccc-----cchhhh
Confidence 566777777788899999999999999988777777654 211 11 11111122233332221 167999
Q ss_pred CCCCeEEEEeCeE-------ECceEeeeeeEEEe
Q 011046 269 EDGDMALLDMGAE-------YQFYGSDITCSFPV 295 (495)
Q Consensus 269 ~~Gd~v~iD~g~~-------~~gY~sd~tRT~~v 295 (495)
++|++..|.+|.. -+.|.--++-|+.|
T Consensus 333 k~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv 366 (960)
T KOG1189|consen 333 KKGMVFNISLGFSNLTNPESKNSYALLLSDTVLV 366 (960)
T ss_pred ccCcEEEEeeccccccCcccccchhhhccceeee
Confidence 9999999999963 24588889999998
No 76
>PRK13607 proline dipeptidase; Provisional
Probab=39.66 E-value=1.4e+02 Score=31.56 Aligned_cols=35 Identities=3% Similarity=0.053 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Q 011046 197 QFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHT 231 (495)
Q Consensus 197 r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~ 231 (495)
++...++.++.+++++.++||++-.|+.......+
T Consensus 271 ~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i 305 (443)
T PRK13607 271 AALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRI 305 (443)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Confidence 36677888899999999999999999987665444
No 77
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=38.13 E-value=1e+02 Score=33.56 Aligned_cols=71 Identities=13% Similarity=-0.012 Sum_probs=45.4
Q ss_pred HHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCC-----CccccccCCCCCCCCCccCCCCeEEEEeCe
Q 011046 206 AHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGE-----NSAVLHYGHAAAPNDRTFEDGDMALLDMGA 280 (495)
Q Consensus 206 a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~-----~~~~~h~~~~~~p~~~~l~~Gd~v~iD~g~ 280 (495)
+-+.++..+|||.+-.+|-..+...+...+-.-.+.|.-.+.++. .+..+... -++|+||.|+++.+.+|.
T Consensus 310 lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~igiefR~s~~~~nv----kn~r~lq~g~~fnis~gf 385 (1001)
T COG5406 310 LQKYILGLVRPGTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIGIEFRSSQKPFNV----KNGRVLQAGCIFNISLGF 385 (1001)
T ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCchHhhhhhhhccccccccccceec----cCCceeccccEEEEeecc
Confidence 445667789999999999888888876653222344433333322 11122211 267999999999999974
No 78
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=29.46 E-value=53 Score=20.59 Aligned_cols=15 Identities=20% Similarity=0.461 Sum_probs=13.3
Q ss_pred CCCHHHHHHHHHHHH
Q 011046 11 KVPKELYFINREKVL 25 (495)
Q Consensus 11 ~~~~~~y~~R~~~l~ 25 (495)
.|+.+||.+++++|.
T Consensus 16 ~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 16 EISEEEYEQKKARLL 30 (31)
T ss_pred CCCHHHHHHHHHHHh
Confidence 589999999999875
No 79
>PF11149 DUF2924: Protein of unknown function (DUF2924); InterPro: IPR021322 This entry is represented by Bacteriophage WO, Gp30. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This bacterial family of proteins has no known function.
Probab=28.53 E-value=2.3e+02 Score=24.74 Aligned_cols=35 Identities=23% Similarity=0.387 Sum_probs=29.4
Q ss_pred EceEEEEecCCeeeCCCCCCCHHHHHHHHhcCCCC
Q 011046 452 IESDVLVTANGSKNMTSVPREISDIEAIMAGAPWP 486 (495)
Q Consensus 452 ieD~vlVte~G~e~LT~~p~~~~~Ie~~~~~~~~~ 486 (495)
.+..|.|++||.|.--..=+.+..|-.-+.+..|+
T Consensus 94 ~~h~V~V~~dGfey~Gr~y~SLSaIAr~ITGt~Ws 128 (136)
T PF11149_consen 94 REHEVTVLEDGFEYQGRRYKSLSAIARAITGTRWS 128 (136)
T ss_pred EEEEEEEeCCCEEECCccccCHHHHHHHHhCCccc
Confidence 56788999999888776668999998888888885
No 80
>PF14894 Lsm_C: Lsm C-terminal; PDB: 1M5Q_1.
Probab=23.23 E-value=1e+02 Score=23.07 Aligned_cols=33 Identities=15% Similarity=0.293 Sum_probs=21.0
Q ss_pred ceeEEceEEEEecCCeeeCCCCCCCHHHH-HHHH
Q 011046 448 GGVRIESDVLVTANGSKNMTSVPREISDI-EAIM 480 (495)
Q Consensus 448 ~gvrieD~vlVte~G~e~LT~~p~~~~~I-e~~~ 480 (495)
+-|-+-|.|-||++|.|=--.+...+..| +.+|
T Consensus 26 ~vV~V~drirVse~GVEGsGPlAerv~~ly~eyi 59 (64)
T PF14894_consen 26 NVVVVMDRIRVSENGVEGSGPLAERVYDLYNEYI 59 (64)
T ss_dssp TEEEETTTEEEETTEEE--SHHHHHHHHHHHHHH
T ss_pred CEEEEeeeEEEeccccccCChHHHHHHHHHHHHH
Confidence 36788999999999987443444444444 4444
No 81
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=21.05 E-value=1.2e+02 Score=23.86 Aligned_cols=52 Identities=21% Similarity=0.247 Sum_probs=34.9
Q ss_pred CCccCCCCeEEEEeCeEE-CceEeeee------eEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 011046 265 DRTFEDGDMALLDMGAEY-QFYGSDIT------CSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVC 326 (495)
Q Consensus 265 ~~~l~~Gd~v~iD~g~~~-~gY~sd~t------RT~~v~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~ 326 (495)
++..+.||.|.+++-+.. +|-.-|-+ .+|.+ |. ..+..+.+.++..+++|-+
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~-g~---------~~~i~g~e~al~~m~~Ge~ 60 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRL-GS---------GQVIPGLEEALIGMKVGEK 60 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEET-TS---------SSSSHHHHHHHTTSBTTEE
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeee-cc---------CccccchhhhcccccCCCE
Confidence 356789999999999887 67666666 55665 54 1244466666777777643
No 82
>PRK05728 DNA polymerase III subunit chi; Validated
Probab=20.60 E-value=5.6e+02 Score=22.23 Aligned_cols=94 Identities=10% Similarity=0.045 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCCCCccceeeeCCCccc--cccCCCCCCCCCccCCCC
Q 011046 195 LIQFANDISSEAHVEVMKKTRVGMKEYQMESMFLHHTYMYGGCRHCSYTCICATGENSAV--LHYGHAAAPNDRTFEDGD 272 (495)
Q Consensus 195 ~~r~Aa~i~~~a~~~~~~~i~~G~tE~el~a~~~~~~~~~~G~~~~~~~~iv~sG~~~~~--~h~~~~~~p~~~~l~~Gd 272 (495)
..+.+|+++.+++..-.+.+--.-++ +.+..+...+..- ...+|.|....|..... |=... . .+..-..++
T Consensus 14 ~~~~~c~L~~ka~~~g~rv~I~~~d~-~~a~~lD~~LW~~---~~~sFlPH~~~~~~~~~~~PV~l~--~-~~~~~~~~~ 86 (142)
T PRK05728 14 LEALLCELAEKALRAGWRVLVQCEDE-EQAEALDEALWTF---RDESFLPHGLAGEGPAAGQPVLLT--W-PGKRNANHR 86 (142)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHHhcCC---CCCcCCCCCcCCCCCCCCCCEEEE--c-CCCCCCCCC
Confidence 57788999988877655544333344 4455566555432 34566665554443211 11000 0 111122345
Q ss_pred eEEEEeCeEECceEeeeeeEEEe
Q 011046 273 MALLDMGAEYQFYGSDITCSFPV 295 (495)
Q Consensus 273 ~v~iD~g~~~~gY~sd~tRT~~v 295 (495)
-++|.+....-.+.+...|.+-+
T Consensus 87 ~~LinL~~~~p~~~~~F~Rviei 109 (142)
T PRK05728 87 DLLINLDGAVPAFAAAFERVVDF 109 (142)
T ss_pred cEEEECCCCCcchhhcccEEEEE
Confidence 66777777777888889999765
Done!