Query         011047
Match_columns 494
No_of_seqs    158 out of 468
Neff          4.2 
Searched_HMMs 29240
Date          Mon Mar 25 19:42:21 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011047.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011047hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1vko_A Inositol-3-phosphate sy 100.0  5E-167  2E-171 1308.9  35.9  448   42-494    76-526 (537)
  2 1p1j_A Inositol-3-phosphate sy 100.0  1E-166  4E-171 1305.2  36.8  449   43-494    66-531 (533)
  3 3qvs_A MIPS, MYO-inositol-1-ph 100.0  2E-134  5E-139 1038.2  32.0  381   43-480     1-391 (392)
  4 3cin_A MYO-inositol-1-phosphat 100.0  2E-101  6E-106  796.6  22.6  370   43-486    14-392 (394)
  5 1gr0_A Inositol-3-phosphate sy 100.0 4.3E-99  1E-103  770.4  12.8  343   45-478    18-366 (367)
  6 1vjp_A MYO-inositol-1-phosphat 100.0 1.8E-90   6E-95  710.0  25.8  362   43-480    14-390 (394)
  7 1eye_A DHPS 1, dihydropteroate  84.7     3.5 0.00012   40.8   9.2  112  177-291    15-132 (280)
  8 1aj0_A DHPS, dihydropteroate s  83.2     7.3 0.00025   38.5  10.7  137  177-317    24-183 (282)
  9 1tx2_A DHPS, dihydropteroate s  82.7     6.1 0.00021   39.5  10.0  114  175-291    47-167 (297)
 10 2dqw_A Dihydropteroate synthas  76.6      11 0.00037   37.7   9.5  139  175-318    36-197 (294)
 11 2y5s_A DHPS, dihydropteroate s  72.7       5 0.00017   40.0   6.0  113  175-291    30-148 (294)
 12 2vef_A Dihydropteroate synthas  69.9     9.2 0.00032   38.4   7.3  108  178-288    20-134 (314)
 13 3tr9_A Dihydropteroate synthas  66.1      27 0.00092   35.2   9.7  116  198-317    56-197 (314)
 14 2h9a_B CO dehydrogenase/acetyl  62.0      44  0.0015   33.5  10.4   65  250-317   138-205 (310)
 15 2vp8_A Dihydropteroate synthas  60.6      13 0.00044   37.6   6.2  112  175-291    49-168 (318)
 16 3mtj_A Homoserine dehydrogenas  60.4      17 0.00058   38.1   7.3  131  187-319    23-163 (444)
 17 4hb7_A Dihydropteroate synthas  58.4      44  0.0015   33.1   9.5  106  179-287    18-129 (270)
 18 4a26_A Putative C-1-tetrahydro  56.9      18 0.00062   36.3   6.5  101  198-316    88-195 (300)
 19 3p2o_A Bifunctional protein fo  53.8      23  0.0008   35.2   6.7  101  198-316    84-190 (285)
 20 2fp4_A Succinyl-COA ligase [GD  53.5      61  0.0021   31.9   9.7  118  199-324    33-187 (305)
 21 4a5o_A Bifunctional protein fo  52.5      29   0.001   34.6   7.2   84  226-316   104-191 (286)
 22 4e38_A Keto-hydroxyglutarate-a  51.9     9.5 0.00032   36.8   3.4   61  248-318    95-155 (232)
 23 3l07_A Bifunctional protein fo  49.6      26 0.00088   34.9   6.2   85  226-316   103-191 (285)
 24 4djd_D C/Fe-SP, corrinoid/iron  43.4      83  0.0028   31.8   8.9   62  250-317   145-212 (323)
 25 2yv1_A Succinyl-COA ligase [AD  42.0 2.4E+02  0.0082   27.4  11.8  148  204-380    36-220 (294)
 26 2z2v_A Hypothetical protein PH  41.6      71  0.0024   32.0   8.1   91  230-325    67-163 (365)
 27 4fo4_A Inosine 5'-monophosphat  41.0      60  0.0021   33.1   7.6   44  248-291   159-219 (366)
 28 3do5_A HOM, homoserine dehydro  40.5      35  0.0012   34.1   5.6  126  187-318    15-167 (327)
 29 3khj_A Inosine-5-monophosphate  39.4      51  0.0017   33.4   6.7   50  248-297   155-222 (361)
 30 3lab_A Putative KDPG (2-keto-3  38.9      10 0.00034   36.5   1.3   30  252-284    78-107 (217)
 31 1oi7_A Succinyl-COA synthetase  38.1 2.3E+02  0.0078   27.5  10.9  148  204-380    30-214 (288)
 32 3mcm_A 2-amino-4-hydroxy-6-hyd  37.9      66  0.0023   33.9   7.4   91  198-292   219-324 (442)
 33 2g0t_A Conserved hypothetical   34.2      45  0.0016   33.9   5.4   84  232-315   110-203 (350)
 34 2k0d_X IMME7, colicin-E7 immun  31.8      24 0.00082   30.4   2.4   56  143-207    36-96  (101)
 35 3eoo_A Methylisocitrate lyase;  31.7 1.4E+02  0.0049   29.7   8.4  102  185-317   136-239 (298)
 36 2bmb_A Folic acid synthesis pr  31.6      60  0.0021   35.1   6.0   81  208-289   269-362 (545)
 37 3ea0_A ATPase, para family; al  30.6 2.9E+02  0.0098   24.5  10.1   44   45-92      7-52  (245)
 38 1wa3_A 2-keto-3-deoxy-6-phosph  29.9      34  0.0012   30.7   3.3   56  251-316    75-130 (205)
 39 3abi_A Putative uncharacterize  29.8      38  0.0013   33.5   3.8   65  251-319    93-158 (365)
 40 3lmz_A Putative sugar isomeras  29.6      71  0.0024   29.2   5.5   65  196-286    65-129 (257)
 41 1y81_A Conserved hypothetical   29.1      51  0.0017   28.6   4.1   82  204-290    40-123 (138)
 42 2d59_A Hypothetical protein PH  26.7      58   0.002   28.2   4.1   82  204-290    48-131 (144)
 43 2nu8_A Succinyl-COA ligase [AD  26.1 1.8E+02  0.0062   28.1   7.9  149  204-379    30-213 (288)
 44 4fxs_A Inosine-5'-monophosphat  25.9      75  0.0026   33.4   5.5   50  248-297   282-349 (496)
 45 3fgn_A Dethiobiotin synthetase  23.8      50  0.0017   31.6   3.4   45  282-326    27-71  (251)
 46 3of5_A Dethiobiotin synthetase  23.7      38  0.0013   31.7   2.4   42  282-323     5-46  (228)
 47 2kxe_A DNA polymerase II small  22.4      56  0.0019   26.5   2.8   63  232-314     5-69  (75)
 48 2obn_A Hypothetical protein; s  22.2      80  0.0027   32.1   4.7   85  230-315    92-186 (349)
 49 4adb_A Succinylornithine trans  21.8 2.6E+02  0.0087   26.6   8.0   23  272-294   206-228 (406)
 50 1j6u_A UDP-N-acetylmuramate-al  21.1      80  0.0027   32.5   4.5   27  294-320   124-150 (469)
 51 1a4i_A Methylenetetrahydrofola  21.0 1.8E+02  0.0063   29.0   6.9  104  197-316    85-195 (301)
 52 2yci_X 5-methyltetrahydrofolat  21.0      84  0.0029   30.6   4.4   70  247-317    86-167 (271)
 53 2csu_A 457AA long hypothetical  21.0 2.1E+02  0.0072   29.6   7.6  147  204-380    34-217 (457)
 54 2duw_A Putative COA-binding pr  20.6      81  0.0028   27.4   3.8   82  204-290    39-124 (145)
 55 3qxc_A Dethiobiotin synthetase  20.2      48  0.0016   31.6   2.4   43  282-324    22-64  (242)
 56 1b0a_A Protein (fold bifunctio  20.1 2.4E+02  0.0082   28.0   7.5  102  197-316    83-189 (288)

No 1  
>1vko_A Inositol-3-phosphate synthase; CE21227, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD; 2.30A {Caenorhabditis elegans} SCOP: c.2.1.3 d.81.1.3
Probab=100.00  E-value=4.8e-167  Score=1308.91  Aligned_cols=448  Identities=54%  Similarity=0.920  Sum_probs=439.4

Q ss_pred             hhhhhhhccCcchhHHHHHHHHhhhhhhcCCcccccccccccccccCcccccceeccccC--CcccccccccCCCCCCCC
Q 011047           42 SLNLGLCLWVGVETTAQLSRVVLSRIESEGISWATKDTVQQANYFGSLTQASAIRVGSYN--GEEIYAPFKSILPMVNPD  119 (494)
Q Consensus        42 ~lGv~lvG~gG~v~TT~~aG~~A~~~~r~gl~w~tk~g~~~~n~~Gsvtq~~t~rlg~~~--~~~~~~p~~~~lPl~~~~  119 (494)
                      =+||||||||||||||++||++||   |+||+|+||+|+++|||||||||+||||||..+  |+++|+||+++|||++||
T Consensus        76 k~GvmlVG~gGn~~TT~~aG~~A~---r~gl~~~tk~g~~~~ny~GSltq~stirlG~~~~tg~~~~~p~~~~lpl~~p~  152 (537)
T 1vko_A           76 KTGLLLVGLGGNNGSTAVGSIFAN---QYAMTWRTKEGHSQANYFGSVTQTATVHLGYDSATQNQIFVPFKDIVPILSPN  152 (537)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHH---HTTCEEEETTEEEECCCTTCHHHHCEEEEEEETTTTEEEEEEGGGTSCCCCGG
T ss_pred             ceEEEEEecCccHHHHHHHHHHHH---HcCCCcccccCccCCccccceeeeeeEeeccccCCCcccccchhccCCCCChh
Confidence            489999999999999999999999   999999999999999999999999999999743  669999999999999999


Q ss_pred             CeeeecccCCCCCHHHHHHHCCCCChhHHHHhHHHhhhcCCCCCCCChhhHhhhccccCCCCccCCH-HHHHHHHHHHHH
Q 011047          120 DIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTK-KEQMLQIIKDIR  198 (494)
Q Consensus       120 dlVfGGwDI~~~~l~ea~~~a~Vl~~~l~~~v~~~L~~i~p~p~v~~~~fia~nq~~ra~nv~~gt~-~e~ve~ir~DIr  198 (494)
                      |||||||||+++||+|||.||+|||++||+||+|+|++|+|+|+||||+||++||++|++|+++|++ +|++||||+|||
T Consensus       153 dlVfGGwDI~~~nl~~a~~rA~VLd~~l~~~v~~~l~~i~p~p~i~~~~fia~nq~~ra~nv~~g~~~~e~ve~ir~DIr  232 (537)
T 1vko_A          153 DLIISGWDISDSNLYEAMGRAKVFEPELQEKLRPFMEPIVPLPSIYYPDFIASNQGDRANNVIPGDNKLEHLEHIRADIR  232 (537)
T ss_dssp             GEEEEEECSSCCCTTHHHHHHTCSCHHHHHHHHHHHTTCCCBCBCCCGGGSCGGGGGGCCSBCCSSCHHHHHHHHHHHHH
T ss_pred             hEEEecccCCCCCHHHHHHHCCCCCHHHHHHHHHHHHhCCcCCcccCHHHHhhhcccccccccCCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999976 899999999999


Q ss_pred             HHHHhcCCCeEEEEEccCCcccccccCCccccHHHHHHhhhcCCCCCChhHHHHHHHHhcCCCeecCCCCCCCchhHHHH
Q 011047          199 EFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDL  278 (494)
Q Consensus       199 ~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~~al~~n~~~i~aS~~YA~AAl~aG~~fINgtP~~t~ipal~el  278 (494)
                      +||++|||||||||||||||||+++.+++|+|+++|+++|++|+++|+||++||+||++||||||||+||++++|+|.|+
T Consensus       233 ~Fk~~~~ldrvVVlwtAsTE~~~~~~~g~~~t~~~L~~ai~~~~~eisaS~~YA~AAl~aG~~FIN~sP~~~~~P~~~el  312 (537)
T 1vko_A          233 KFKQEHELECVIVLWTANTERYTDVRQGLNATADEIMESIRVNEDEVSPSNIFAVASILEGAHYINGSPQNTLVPGLIEL  312 (537)
T ss_dssp             HHHHHHTCSEEEEEECSCCCCCCCCCTTTTSSHHHHHHHHHTTCSSCCHHHHHHHHHHHTTCEEEECSSSCCCCHHHHHH
T ss_pred             HHHHHhCCCeEEEEeCCCCcCCCCCccccccCHHHHHHHHhcCCccCChHHHHHHHHHhcCCceeecCCcccCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCccccCCCCCCcchhHHHHHHHHHhcCCceeEEEeeeecCCccccCCCCcccchhhhhhhhhHHhhhhhcCCccC
Q 011047          279 AIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILY  358 (494)
Q Consensus       279 ae~~gvpi~GdD~KSGqT~lks~La~~l~~RGlkv~s~~s~NilGN~Dg~nL~~p~~~~SKeiSKs~vv~dil~~~~~ly  358 (494)
                      |+++|+||+|||||||||++||+|++||++||++|.+||||||||||||+||++|+||+|||+||+++|++|++++.+||
T Consensus       313 ae~~gvpI~GDD~KSGqT~lksvLa~~l~~RGlkv~~~~s~NilGN~Dg~NL~~p~~~~SKeiSKs~vV~dil~~~~~lY  392 (537)
T 1vko_A          313 AERHKVFVGGDDFKSGQTKFKSAFVDFLVSSGMKPESIVSYNHLGNNDGKNLSEARQFRSKEISKSSVVDDMVKSNQILF  392 (537)
T ss_dssp             HHHHTCCEECSCBCCSHHHHHHHHHHHHHHTTCEEEEEEEEEEECSHHHHHTTSHHHHHHHHHHHHTTTHHHHHHCTTTC
T ss_pred             HHHhCCceeccccccCCchhHHHHHHHHHHcCCceeEEEEEEeccCcchhhhCCHhhhhhhhhHHHHHHHHHhccCcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcceeeecccCCCCCceeEEEEEeeeecCCCeEEEEEEeeeccccchhhHHHhHHHHHHHHHHhhhhhcCCCccc
Q 011047          359 GPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFH  438 (494)
Q Consensus       359 ~~g~~~~h~v~I~YvP~lGD~K~A~d~i~~~gFlG~~~ti~i~~~c~DS~lAApLviDLirla~la~r~g~~~~~~~~~~  438 (494)
                      +||++++|+|+||||||+||+|+|||+|++++|||+||+|+++|+|+||+||||||||||||+|+|+|+|+.+  +++|+
T Consensus       393 ~~G~~~dh~V~IdYVP~lGD~K~A~d~~~~~~FlG~~~~I~i~~~~~DS~lAApliIDLvrlaklA~r~g~~g--~~~~~  470 (537)
T 1vko_A          393 PDAKNPDYCVVIKYVPYVADSKRAMDEYICSIFMGGKQTFVVHNTCEDSLLASPLIYDLAILTELASRVSYKV--DDEYK  470 (537)
T ss_dssp             TTCCCCEEEECCEECGGGTTEEEEEEEEEEECGGGCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTEEEES--SSSEE
T ss_pred             cCCCCCCCceEEeecCCCCCcEEEEEEEEEeeecCCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHhcccCC--ccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999864  36899


Q ss_pred             ccCCchhhhhhhccCCCCCCCCCccCcHHHHHHHHHHHHHHhcCCCCCCccccccC
Q 011047          439 SFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK  494 (494)
Q Consensus       439 ~~g~V~s~lsy~fKsP~~~~g~~~~~~l~~Q~~~L~n~lr~~~g~~~~~~~~le~~  494 (494)
                      .+++|+++||||||+|++|+|++++|+|++||++|+||+|+|+|++|++||+|||+
T Consensus       471 ~~~~v~s~lSy~fKsP~~~~g~~~~n~L~~Qr~~Lenfir~~~Gl~~~~~~~le~~  526 (537)
T 1vko_A          471 PFHSVLSILSLLLKAPVVPPGTPISNAFMRQFSTLTKLVTALAGFPSDTDMQIEFF  526 (537)
T ss_dssp             CCCSBCGGGGGGBSSCCCSTTSCCCCCHHHHHHHHHHHHHHHHTCCCCTTSCGGGT
T ss_pred             cccchhhHHHHHccCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccccceee
Confidence            99999999999999999999999999999999999999999999999999999996


No 2  
>1p1j_A Inositol-3-phosphate synthase; 1L-MYO-inositol 1-phosphate, NADH, isomerase, rossmann fold; HET: NAI; 1.70A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.3 PDB: 1jkf_A* 1la2_A* 1p1f_A 1jki_A* 1p1i_A* 1p1h_A* 1p1k_A* 1rm0_A*
Probab=100.00  E-value=1.1e-166  Score=1305.24  Aligned_cols=449  Identities=54%  Similarity=0.890  Sum_probs=439.7

Q ss_pred             hhhhhhccCcchhHHHHHHHHhhhhhhcCCcccccccccccccccCcccccceeccccC-CcccccccccCCCCCCCCCe
Q 011047           43 LNLGLCLWVGVETTAQLSRVVLSRIESEGISWATKDTVQQANYFGSLTQASAIRVGSYN-GEEIYAPFKSILPMVNPDDI  121 (494)
Q Consensus        43 lGv~lvG~gG~v~TT~~aG~~A~~~~r~gl~w~tk~g~~~~n~~Gsvtq~~t~rlg~~~-~~~~~~p~~~~lPl~~~~dl  121 (494)
                      +||||||||||||||++||++||   |+||+|+||+|+++|||||||||+||||||.++ ++++|+||+++|||++||||
T Consensus        66 ~GvmlVG~gGn~~TT~~aG~~A~---r~gl~~~tk~g~~~pny~GS~tq~stirlG~~~~~~~~~~p~~~~lpl~~p~dl  142 (533)
T 1p1j_A           66 LGIMLIGLGGNNGSTLVASVLAN---KHNVEFQTKEGVKQPNYFGSMTQCSTLKLGIDAEGNDVYAPFNSLLPMVSPNDF  142 (533)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHH---HTTCCEEETTEEECCCCTTCHHHHCEEEEEECTTSCEEEEEGGGSSCCCCGGGE
T ss_pred             eEEEEEecCccHHHHHHHHHHHH---HcCCCcccCCccccCccccceeeeeeeeecccCCCCcccCchhhcCCCCChhhe
Confidence            79999999999999999999999   999999999999999999999999999999855 77999999999999999999


Q ss_pred             eeecccCCCCCHHHHHHHCCCCChhHHHHhHHHhhhcCCCCCCCChhhHhhhccccCCCCc--------cCCH-HHHHHH
Q 011047          122 VFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVI--------KGTK-KEQMLQ  192 (494)
Q Consensus       122 VfGGwDI~~~~l~ea~~~a~Vl~~~l~~~v~~~L~~i~p~p~v~~~~fia~nq~~ra~nv~--------~gt~-~e~ve~  192 (494)
                      |||||||+++||+|||.||||||++||+||+|+|++|+|+|+||||+|||+||++|++|++        +|++ +|++||
T Consensus       143 VfGGWDI~~~nl~~a~~rA~VL~~~l~~~v~~~l~~i~p~p~i~~~~fia~nq~~ra~nv~~~~~g~~~~g~~~~e~ve~  222 (533)
T 1p1j_A          143 VVSGWDINNADLYEAMQRSQVLEYDLQQRLKAKMSLVKPLPSIYYPDFIAANQDERANNCINLDEKGNVTTRGKWTHLQR  222 (533)
T ss_dssp             EEEEECSSCCCHHHHHHHHTCSCHHHHHHHHHHHTTCCCBCBCCCGGGSCGGGGGGCCCBSCBCTTSCBCSCCHHHHHHH
T ss_pred             EEecccCCCCCHHHHHHHcCCCCHHHHHHHHHHHHhCCcCccccChhHHhhhccccCCceeecccccCCCCCcHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999        7865 899999


Q ss_pred             HHHHHHHHHHhcCCCeEEEEEccCCcccccccCCccccHHHHHHhhhcCCCCCChhHHHHHHHHhcCCCeecCCCCCCCc
Q 011047          193 IIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFV  272 (494)
Q Consensus       193 ir~DIr~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~~al~~n~~~i~aS~~YA~AAl~aG~~fINgtP~~t~i  272 (494)
                      ||+|||+||++|||||||||||||||||+++.+++|+|+++|+++|++|+++|+||++||+||++||||||||+||++++
T Consensus       223 ir~DIr~Fk~~~~ldrvVVlwtAsTE~~~~~~~g~~~t~~~l~~ai~~~~~eispS~~YA~AAl~aG~~fIN~sP~~t~~  302 (533)
T 1p1j_A          223 IRRDIQNFKEENALDKVIVLWTANTERYVEVSPGVNDTMENLLQSIKNDHEEIAPSTIFAAASILEGVPYINGSPQNTFV  302 (533)
T ss_dssp             HHHHHHHHHHHTTCSCEEEEECSCCCCCCCCCTTTTSSHHHHHHHHHTTCTTCCHHHHHHHHHHHTTCCEEECSCSCCCC
T ss_pred             HHHHHHHHHHHcCCCeEEEEeCcCccCCCCCccccccCHHHHHHHHhcCCccCChHHHHHHHHHhcCCceeecCCcccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHhCCccccCCCCCCcchhHHHHHHHHHhcCCceeEEEeeeecCCccccCCCCcccchhhhhhhhhHHhhhhh
Q 011047          273 PGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVS  352 (494)
Q Consensus       273 pal~elae~~gvpi~GdD~KSGqT~lks~La~~l~~RGlkv~s~~s~NilGN~Dg~nL~~p~~~~SKeiSKs~vv~dil~  352 (494)
                      |+|+|+|+++|+||+|||||||||++||+|++||++||++|.+||||||||||||+||++|+||+|||+||+++|++|++
T Consensus       303 P~~~elae~~gvpI~GDD~KSGqT~lksvLa~~l~~RGlkv~~~~s~N~lGN~Dg~NL~~p~~f~SKeiSKs~vV~dil~  382 (533)
T 1p1j_A          303 PGLVQLAEHEGTFIAGDDLKSGQTKLKSVLAQFLVDAGIKPVSIASYNHLGNNDGYNLSAPKQFRSKEISKSSVIDDIIA  382 (533)
T ss_dssp             HHHHHHHHHHTCCEEESSBCCSHHHHHHHHHHHHHHTTCEEEEEEEEEEECSHHHHHHTSHHHHHHHHHHHHHTTHHHHH
T ss_pred             HHHHHHHHHhCCceeccccccCCchhHHHHHHHHHHcCCceeEEEEEEeccCcchhhhCCHhhhhhhhhHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCccCCC--CCCCcceeeecccCCCCCceeEEEEEeeeecCCCeEEEEEEeeeccccchhhHHHhHHHHHHHHHHhhhh
Q 011047          353 SNGILYGP--GEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLK  430 (494)
Q Consensus       353 ~~~~ly~~--g~~~~h~v~I~YvP~lGD~K~A~d~i~~~gFlG~~~ti~i~~~c~DS~lAApLviDLirla~la~r~g~~  430 (494)
                      ++.+||++  |++++|+|+|+||||+||+|+|||+|++++|||+||+|+++|+|+||+||||||||||||+|||+|+|+.
T Consensus       383 ~~~~ly~~~~G~~~dh~V~IdYVP~lGD~K~A~d~~~~~~F~G~~~~I~i~~~c~DS~lAApliIDLvrla~la~r~g~~  462 (533)
T 1p1j_A          383 SNDILYNDKLGKKVDHCIVIKYMKPVGDSKVAMDEYYSELMLGGHNRISIHNVCEDSLLATPLIIDLLVMTEFCTRVSYK  462 (533)
T ss_dssp             TCTTTSBTTTBCCCEEEEEEEECGGGTTEEEEEEEEEEECGGGCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHTEEEE
T ss_pred             ccccccccccCCCCCCceEEeecCCCCCcEEEEEEEEEeeecCCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHhcCcC
Confidence            99999987  8899999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             hc-----CCCcccccCCchhhhhhhccCCCCCCCCCccCcHHHHHHHHHHHHHHhcCCCCCCccccccC
Q 011047          431 AE-----GEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK  494 (494)
Q Consensus       431 ~~-----~~~~~~~~g~V~s~lsy~fKsP~~~~g~~~~~~l~~Q~~~L~n~lr~~~g~~~~~~~~le~~  494 (494)
                      +.     ++++|+.+++|+++||||||+|++++|.+++|+|++||++|+||+|+|+|++|+|||+||||
T Consensus       463 g~~~~~~~~~~~~~~~~v~s~lSy~fKsP~~~~g~~~~n~L~~Qr~~lenfir~~~Gl~~~~~~~le~~  531 (533)
T 1p1j_A          463 KVDPVKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHPVNGLNKQRTALENFLRLLIGLPSQNELRFEER  531 (533)
T ss_dssp             ECBTTBTTCSCCBCCCSBCGGGGGGBSSCCCCTTCCCCCCHHHHHHHHHHHHHHHTTCCCCCCCCHHHH
T ss_pred             CcccccccccccccccchHHHHHHHccCCCCCCCCcccChHHHHHHHHHHHHHHhcCCCccccccceee
Confidence            52     56789999999999999999999999999999999999999999999999999999999996


No 3  
>3qvs_A MIPS, MYO-inositol-1-phosphate synthase (INO1); NAD binding rossmann fold, L-MYO-inositol 1-phosphate syntha isomerase; HET: NAD PG4; 1.70A {Archaeoglobus fulgidus} PDB: 1u1i_A* 3qvt_A* 3qvw_A* 3qvx_A* 3qw2_A*
Probab=100.00  E-value=1.5e-134  Score=1038.21  Aligned_cols=381  Identities=24%  Similarity=0.321  Sum_probs=363.5

Q ss_pred             hhhhhhccCcchhHHHHHHHHhhhhhhcCCcccccccccccccccCcccccceeccccCCcccccccccCCCCCCCCCee
Q 011047           43 LNLGLCLWVGVETTAQLSRVVLSRIESEGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIV  122 (494)
Q Consensus        43 lGv~lvG~gG~v~TT~~aG~~A~~~~r~gl~w~tk~g~~~~n~~Gsvtq~~t~rlg~~~~~~~~~p~~~~lPl~~~~dlV  122 (494)
                      .||||||||||||||++||++||   |+|++|+|          |++||.+               +.++|||++|||||
T Consensus         1 ~Gv~lvG~gG~vaTT~~aG~~A~---k~gl~~~~----------G~~~~~~---------------~~~~lpl~~~~Dlv   52 (392)
T 3qvs_A            1 MKVWLVGAYGIVSTTAMVGARAI---ERGIAPKI----------GLVSELP---------------HFEGIEKYAPFSFE   52 (392)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHH---HTTCSCCT----------TCGGGSG---------------GGTTGGGTSCSCCE
T ss_pred             CceEEecCCccHHHHHHHHHHHH---HcCCCCcc----------cccccCc---------------ccccCCCCChhhEE
Confidence            39999999999999999999999   99999988          9998853               33579999999999


Q ss_pred             eecccCCC-CCHHHHHH----HCCCCChhHHHHhHHHhhhcCCCCCCCChhhHhhhccccCCCCcc---CCHHHHHHHHH
Q 011047          123 FGGWDISD-MNLADAMA----RARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIK---GTKKEQMLQII  194 (494)
Q Consensus       123 fGGwDI~~-~~l~ea~~----~a~Vl~~~l~~~v~~~L~~i~p~p~v~~~~fia~nq~~ra~nv~~---gt~~e~ve~ir  194 (494)
                      ||||||++ +||||||.    ||+|||++||+||+|+|++|+|+|++|+|+|++. |+.|++|+++   +|++|++|+||
T Consensus        53 ~GGwDI~~~~~l~~aa~~~~~~a~Vl~~~l~~~v~~~L~~i~p~~~~~~~~~~~~-~~~~~~~~l~~~~~t~~e~ve~ir  131 (392)
T 3qvs_A           53 FGGHEIRLLSNAYEAAKEHWELNRHFDREILEAVKSDLEGIVARKGTALNCGSGI-KELGDIKTLEGEGLSLAEMVSRIE  131 (392)
T ss_dssp             EEEEESSCCSCHHHHHHHHHHHHCCSCHHHHHHTHHHHHTCCCEECCCTTCCGGG-GGGCSCCCSGGGTCCHHHHHHHHH
T ss_pred             EeeeeCCCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHhCCccccccccchhhh-hcccccccccCCCCCHHHHHHHHH
Confidence            99999999 99999888    8999999999999999999999999999988766 9999999964   48999999999


Q ss_pred             HHHHHHHHhcCCCeEEEEEccCCcccccccCCccccHHHHHHhhhcCCCCC-ChhHHHHHHHHhcCCCeecCCCC-CCCc
Q 011047          195 KDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEI-SPSTLYAIACVLENIPFINGSPQ-NTFV  272 (494)
Q Consensus       195 ~DIr~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~~al~~n~~~i-~aS~~YA~AAl~aG~~fINgtP~-~t~i  272 (494)
                      +|||+||+    ||||||||||||||++..+++|+|+++|+++|++|+++| |||++||+||++||||||||+|+ ++++
T Consensus       132 ~DIr~Fk~----d~vVVlw~asTE~~~~~~~~~~~t~~~l~~ai~~~~~ei~spS~~YA~AAl~ag~~fvN~~P~~~a~~  207 (392)
T 3qvs_A          132 EDIKSFAD----DETVVINVASTEPLPNYSEEYHGSLEGFERMIDEDRKEYASASMLYAYAALKLGLPYANFTPSPGSAI  207 (392)
T ss_dssp             HHHHHHCC----TTEEEEECSCCCCCCCCCHHHHSSHHHHHHHHHTTCGGGCCHHHHHHHHHHHTTCCEEECSSSCTTCS
T ss_pred             HHHHHhhc----CCEEEEECCCCCCCCCCCcccccCHHHHHHHHhcCCccccChHHHHHHHHHHcCCCeeecCCccccCC
Confidence            99999998    999999999999999999889999999999999999999 99999999999999999999999 4789


Q ss_pred             hhHHHHHHHhCCccccCCCCCCcchhHHHHHHHHHhcCCceeEEEeeeecCCccccCCCCcccchhhhhhhhhHHhhhhh
Q 011047          273 PGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVS  352 (494)
Q Consensus       273 pal~elae~~gvpi~GdD~KSGqT~lks~La~~l~~RGlkv~s~~s~NilGN~Dg~nL~~p~~~~SKeiSKs~vv~dil~  352 (494)
                      |++.|+|+++|+||+|||||||||++||+|++||++||++|.+||||||||||||+||++|+||+|||+||+++|++|++
T Consensus       208 P~~~ela~~~g~pi~GdD~KsGqT~~ks~La~~l~~Rglkv~~~~q~N~lGN~Dg~nL~~~~~~~SK~iSKs~vv~~~lg  287 (392)
T 3qvs_A          208 PALKELAEKKGVPHAGNDGKTGETLVKTTLAPMFAYRNMEVVGWMSYNILGDYDGKVLSARDNKESKVLSKDKVLEKMLG  287 (392)
T ss_dssp             HHHHHHHHHHTCEEECSSBCCSHHHHHHHHHHHHHHTTCEEEEEEEEEEECHHHHHHTTSHHHHHHHHHHHHTHHHHHHS
T ss_pred             HHHHHHHHHcCCCEecCcccCCCchHHHHHHHHHHHcCCceeEEEEEeccccchhhhhCCHhHhhhhhhHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999994


Q ss_pred             cCCccCCCCCCCcceeeecccCCCCCceeEEEEEeeeecCCCeEEEEEEeeeccccchhhHHHhHHHHHHHHHHhhhhhc
Q 011047          353 SNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAE  432 (494)
Q Consensus       353 ~~~~ly~~g~~~~h~v~I~YvP~lGD~K~A~d~i~~~gFlG~~~ti~i~~~c~DS~lAApLviDLirla~la~r~g~~~~  432 (494)
                               ++++|+|+|+||||+||+|+|||+|++++|||+||+|+++|+|+||+|||||||||+||+|+|+|+|    
T Consensus       288 ---------~~~~~~v~I~Yvp~lGD~K~a~d~i~~~~F~G~~~~i~~~~~~~DS~laAplviDlvrl~~la~~~g----  354 (392)
T 3qvs_A          288 ---------YSPYSITEIQYFPSLVDNKTAFDFVHFKGFLGKLMKFYFIWDAIDAIVAAPLILDIARFLLFAKKKG----  354 (392)
T ss_dssp             ---------SCCEEEEEEEECGGGTTCCEEEEEEEEECGGGCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHTT----
T ss_pred             ---------CCCCCceEEeecCCCCCceEEEEEEEeeeeCCCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHhcC----
Confidence                     4678999999999999999999999999999999999999999999999999999999999999987    


Q ss_pred             CCCcccccCCchhhhhhhccCCCCCCCCCccCcHHHHHHHHHHHHHHh
Q 011047          433 GEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRAC  480 (494)
Q Consensus       433 ~~~~~~~~g~V~s~lsy~fKsP~~~~g~~~~~~l~~Q~~~L~n~lr~~  480 (494)
                             ++|+++++|||||+|++++    +|+|++|+++|+||+|.+
T Consensus       355 -------~~G~l~~ls~~~K~P~~~~----~~~l~~q~~~l~~~~r~~  391 (392)
T 3qvs_A          355 -------VKGVVKEMAFFFKSPMDTN----VINTHEQFVVLKEWYSNL  391 (392)
T ss_dssp             -------CCEECGGGGGGBSSCTTCC----CCCHHHHHHHHHHHHHHH
T ss_pred             -------CCCchHHHHHHhcCCCCCC----CCcHHHHHHHHHHHHHhc
Confidence                   4679999999999999764    489999999999999975


No 4  
>3cin_A MYO-inositol-1-phosphate synthase-related protein; structura genomics, joint center for structural genomics, JCSG; HET: NAD; 1.70A {Thermotoga maritima MSB8}
Probab=100.00  E-value=1.9e-101  Score=796.57  Aligned_cols=370  Identities=21%  Similarity=0.325  Sum_probs=321.1

Q ss_pred             hhhhhhccCcchhHHHHHHHHhhhhhhcCCcccccccccccccccCcccccceeccccCCcccccccccCCCCCCCCCee
Q 011047           43 LNLGLCLWVGVETTAQLSRVVLSRIESEGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIV  122 (494)
Q Consensus        43 lGv~lvG~gG~v~TT~~aG~~A~~~~r~gl~w~tk~g~~~~n~~Gsvtq~~t~rlg~~~~~~~~~p~~~~lPl~~~~dlV  122 (494)
                      ++||+||+ ||||||+++|++++   |+|+.-+          +|                   +|+.+.+|+..+|++|
T Consensus        14 IrVaIvGv-GnvASTlvqGv~~~---r~g~~~~----------~G-------------------~p~~~~~p~~~~Di~v   60 (394)
T 3cin_A           14 VKVLILGQ-GYVASTFVAGLEKL---RKGEIEP----------YG-------------------VPLARELPIGFEDIKI   60 (394)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHH---HTTSSCC----------TT-------------------CTTTTCSSSCGGGEEE
T ss_pred             eEEEEecC-CHHHHHHHHHHHHH---HcCCCCC----------cc-------------------ccccccCCCCCCCcEE
Confidence            79999998 79999999999999   9885322          23                   4677789999999999


Q ss_pred             eecccCCCCCHHHHHHHCCCCChhHHHHhHHHhhhcCCCCCCCChhhHhhhccccCCCCc-cCCHHHHHHHHHHHHHHH-
Q 011047          123 FGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVI-KGTKKEQMLQIIKDIREF-  200 (494)
Q Consensus       123 fGGwDI~~~~l~ea~~~a~Vl~~~l~~~v~~~L~~i~p~p~v~~~~fia~nq~~ra~nv~-~gt~~e~ve~ir~DIr~F-  200 (494)
                      ||||||+..++++.          +.+++..+...+.+++.+  |++....+..+..|.. .++..+..+++++||++| 
T Consensus        61 vgg~DId~~kvgk~----------l~eAi~~~~n~~~~~~~~--p~~~~~v~~~~~~~~~~~~~~~~~~~~~~e~i~~~~  128 (394)
T 3cin_A           61 VGSYDVDRAKIGKK----------LSEVVKQYWNDVDSLTSD--PEIRKGVHLGSVRNLPIEAEGLEDSMTLKEAVDTLV  128 (394)
T ss_dssp             EEEEECBTTTTTSB----------HHHHHHHHCTTCCCCSSC--CBCEECCCTTTTTTSSCCBCCGGGSSCHHHHHHHHH
T ss_pred             EEEecCCcchhHHH----------HHHHHhhchhccccccCc--cccccCcccccccCcCccccchhhhhhHHHhHHHHH
Confidence            99999998877553          344566666666665543  5666666766666653 234455555677777777 


Q ss_pred             HHhcCCCeEEEEEccCCcccccccCCccccHHHHHHhhhcCCCC-CChhHHHHHHHH-----hcCCCeecCCCCCCC-ch
Q 011047          201 KEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAE-ISPSTLYAIACV-----LENIPFINGSPQNTF-VP  273 (494)
Q Consensus       201 k~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~~al~~n~~~-i~aS~~YA~AAl-----~aG~~fINgtP~~t~-ip  273 (494)
                      |+.+++|++||||+||||+|.+    + .|.+++++++++++.+ |+||++||+||+     ++|||||||+|+++. +|
T Consensus       129 k~~~~~~~~Vvvn~asTE~ylp----v-gs~~~~~~a~~~~~~~~i~as~~YA~AAl~~aa~~aG~~fvN~~P~~ia~~P  203 (394)
T 3cin_A          129 KEWTELDPDVIVNTCTTEAFVP----F-GNKEDLLKAIENNDKERLTATQVYAYAAALYANKRGGAAFVNVIPTFIANDP  203 (394)
T ss_dssp             HHHHHHCCSEEEECCCCCCCCC----C-SSHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHTCEEEEECSSSCSTTCH
T ss_pred             HHhhhccceeEeeecccccCCC----C-CCHHHHHHHhhccccccCChhHHHHHHHHHhhhhhcCCceecCCCccccCcH
Confidence            5557899999999999999984    2 5889999999988766 999999999999     799999999998765 79


Q ss_pred             hHHHHHHHhCCccccCCCCCCcchhHHHHHHHHHhcCCceeEEEeeeecCCccccCCCCcccchhhhhhhhhHHhhhhhc
Q 011047          274 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSS  353 (494)
Q Consensus       274 al~elae~~gvpi~GdD~KSGqT~lks~La~~l~~RGlkv~s~~s~NilGN~Dg~nL~~p~~~~SKeiSKs~vv~dil~~  353 (494)
                      +|.|+|+++|+||+|||+|||||++||+|++||++||++|.+|||+|||||+||+||++|+||+|||+||+++|++|+++
T Consensus       204 ~~~ela~~~gvpi~GdD~ktG~T~~k~~L~~~l~~rgl~v~~~~q~N~lGN~Dg~nl~~~~~~~sK~~SK~~vv~~~l~~  283 (394)
T 3cin_A          204 AFVELAKENNLVVFGDDGATGATPFTADVLSHLAQRNRYVKDVAQFNIGGNMDFLALTDDGKNKSKEFTKSSIVKDILGY  283 (394)
T ss_dssp             HHHHHHHHTTEEEECSSBSCSHHHHHHHHHHHHHHTTCEEEEEEEEEEECCGGGGSSCHHHHHHHHHHHSCCHHHHHHSS
T ss_pred             HHHHHHHHcCCcEecccccccchhHHHHHHHHHHHCCCeEeEEEEEeecccchhhHhCCHhhhhhHHHHHHHHHHHHhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999974


Q ss_pred             CCccCCCCCCCcceeeecccCCCCCceeEEEEEeeeecCCCeEEEEEEeeeccccchhhHHHhHHHHHHHHHHhhhhhcC
Q 011047          354 NGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEG  433 (494)
Q Consensus       354 ~~~ly~~g~~~~h~v~I~YvP~lGD~K~A~d~i~~~gFlG~~~ti~i~~~c~DS~lAApLviDLirla~la~r~g~~~~~  433 (494)
                      +        .++|+++|+||||+||+|+|||+|++++|||+||+|+++|+|+||+||||||||||||+|+|+|+|     
T Consensus       284 ~--------~~~h~~~~~Yvp~lgD~K~a~~~ie~~~f~g~~~~i~~~~~~~DS~laAplviDlir~~~la~~~g-----  350 (394)
T 3cin_A          284 D--------APHYIKPTGYLEPLGDKKFIAIHIEYVSFNGATDELMINGRINDSPALGGLLVDLVRLGKIALDRK-----  350 (394)
T ss_dssp             C--------CCEECCCCEECGGGTTEEEEEEEEEEECGGGCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHTT-----
T ss_pred             c--------ccccccccCCCCcCCCCeEEEEEEEEEEecCcceEEEEEeEEechhhhHHHHHHHHHHHHHHHHhc-----
Confidence            3        568999999999999999999999999999999999999999999999999999999999998877     


Q ss_pred             CCcccccCCchhhhhhhccCCCCCCCCCccCcHHHHHHHHHHHHHHhcCCCCC
Q 011047          434 EGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPE  486 (494)
Q Consensus       434 ~~~~~~~g~V~s~lsy~fKsP~~~~g~~~~~~l~~Q~~~L~n~lr~~~g~~~~  486 (494)
                           .+|+++++||||||+|+.+.+...      |++.+++++|.|+|++|+
T Consensus       351 -----~~g~v~~~~s~~~K~P~~~~~~~~------~~~~~~~~lr~~~g~~p~  392 (394)
T 3cin_A          351 -----EFGTVYPVNAFYMKNPGPAEEKNI------PRIIAYEKMRIWAGLKPK  392 (394)
T ss_dssp             -----CCEECHHHHHHHBSSCSSTTCCCC------CHHHHHHHHHHHTTCCCC
T ss_pred             -----CCCcchhHHHHHcCCCCCCCCCcH------HHHHHHHHHHHHcCCCcc
Confidence                 478899999999999998765544      677778889999999996


No 5  
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=100.00  E-value=4.3e-99  Score=770.37  Aligned_cols=343  Identities=19%  Similarity=0.178  Sum_probs=287.0

Q ss_pred             hhhhccCcchhHHHHHHHHhhhhhhcCCcccccccccccccccCcccccceeccccCCcccccccccCCCCCCCCCe-ee
Q 011047           45 LGLCLWVGVETTAQLSRVVLSRIESEGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDI-VF  123 (494)
Q Consensus        45 v~lvG~gG~v~TT~~aG~~A~~~~r~gl~w~tk~g~~~~n~~Gsvtq~~t~rlg~~~~~~~~~p~~~~lPl~~~~dl-Vf  123 (494)
                      |.|||| ||+|||+++|++|+   |+|.+|+++.|+...                           ++. +++|+|+ ++
T Consensus        18 VaIVGv-GN~GsaLv~Gi~~y---k~~~~~~~~~Gl~~~---------------------------~~g-~~~~~Di~iV   65 (367)
T 1gr0_A           18 VAIVGV-GNCASSLVQGVEYY---YNADDTSTVPGLMHV---------------------------RFG-PYHVRDVKFV   65 (367)
T ss_dssp             EEEECC-SHHHHHHHHHHHHT---TTCCTTSCCTTCSCS---------------------------EET-TEEGGGEEEE
T ss_pred             EEEECc-ChHHHHHHHHHHHH---hccCcccccCCcccc---------------------------ccC-CccCCCeEEE
Confidence            445999 79999999999999   999999998775442                           222 4678999 69


Q ss_pred             ecccCCCCCHHHHHHHCCCCChhHHHHhHHHhh--hcCCCCCCCChhhHhhhccccCCCCccCCHHHHHHHHHHHHHHHH
Q 011047          124 GGWDISDMNLADAMARARVFDIDLQKQLRPYME--SMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQIIKDIREFK  201 (494)
Q Consensus       124 GGwDI~~~~l~ea~~~a~Vl~~~l~~~v~~~L~--~i~p~p~v~~~~fia~nq~~ra~nv~~gt~~e~ve~ir~DIr~Fk  201 (494)
                      +||||++.+++++|.+|.|++++++.+++ +|.  .++|+|++| +||++++|.    |+++++.     +++.||++|+
T Consensus        66 aafDId~~KVG~~l~~A~~~~~n~~~~~~-~v~~~~v~v~~g~~-ldgia~~~~----~~i~~s~-----~~~~Di~~~~  134 (367)
T 1gr0_A           66 AAFDVDAKKVGFDLSDAIFASENNTIKIA-DVAPTNVIVQRGPT-LDGIGKYYA----DTIELSD-----AEPVDVVQAL  134 (367)
T ss_dssp             EEEECBTTTTTSBHHHHTTSTTCCCCCCS-CCCCCCCBCEECCC-TTSCCHHHH----TTSCBCS-----SCCCCHHHHH
T ss_pred             EEEcCChHHHHHHhhCCEecCCCchhhhh-cccccCceEccCCC-CCchhhhhh----hcccccc-----chhhHHHHHH
Confidence            99999999999999999999999999999 998  899999999 999999993    6777763     3788999999


Q ss_pred             HhcCCCeEEEEEccCCcccccccCCccccHHHHHHhhhcCCCCCChhHHHHHHHHhcCCCeecCCCCCCC-chhHHHHHH
Q 011047          202 EKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTF-VPGLIDLAI  280 (494)
Q Consensus       202 ~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~~al~~n~~~i~aS~~YA~AAl~aG~~fINgtP~~t~-ipal~elae  280 (494)
                      +++++| |||.|       .    ++               .+++||++||+||+++||+||||+|++++ +|+|.|+|+
T Consensus       135 ~~~~~d-VvV~~-------l----p~---------------gs~~aS~~YA~Aal~ag~~fvN~~P~~~~~~P~~~el~~  187 (367)
T 1gr0_A          135 KEAKVD-VLVSY-------L----PV---------------GSEEADKFYAQCAIDAGVAFVNALPVFIASDPVWAKKFT  187 (367)
T ss_dssp             HHTTCS-EEEEC-------C----CT---------------TCHHHHHHHHHHHHHHTCEEEECSSCCSTTSHHHHHHHH
T ss_pred             HHhCCc-EEEEe-------e----eC---------------CCcCHHHHHHHHHHHcCCceEecCCccccCCHHHHHHHH
Confidence            999999 66665       1    11               13579999999999999999999999987 899999999


Q ss_pred             HhCCccccCCCC--CCcchhHHHHHHHHHhcCCceeEEEeeeecCCccccCCCCcccchhhhhhhhhHHhhhhhcCCccC
Q 011047          281 RRNCLIGGDDFK--SGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVSSNGILY  358 (494)
Q Consensus       281 ~~gvpi~GdD~K--SGqT~lks~La~~l~~RGlkv~s~~s~NilGN~Dg~nL~~p~~~~SKeiSKs~vv~dil~~~~~ly  358 (494)
                      ++|+||+|||||  ||||++||+|++||++||++|.+||||||||||||+||++|+||+|||+||+++|++|++++    
T Consensus       188 ~~g~pi~GdD~Ksq~G~T~~k~~La~~l~~rg~kv~~~~q~N~lGN~D~~nL~~~~~~~sK~iSKs~vv~~~l~~~----  263 (367)
T 1gr0_A          188 DARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLKRE----  263 (367)
T ss_dssp             HHTCEEEESSBCCSSCHHHHHHHHHHHHHHTTCEEEEEEEEEEECSHHHHHHHC--------------------------
T ss_pred             HcCCCEeccccccccCCChHHHHHHHHHHHcCCceeEEEEEeccCchhhhhhCChhhhhhhhhHHHHHHHHHhccC----
Confidence            999999999999  89999999999999999999999999999999999999999999999999999999999752    


Q ss_pred             CCCCCCcceeeecccCCCCCceeEEEEEeeeecCCCeEEEEEEeeeccccchhhHHHhHHHHHHHHHHhhhhhcCCCccc
Q 011047          359 GPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQLKAEGEGKFH  438 (494)
Q Consensus       359 ~~g~~~~h~v~I~YvP~lGD~K~A~d~i~~~gFlG~~~ti~i~~~c~DS~lAApLviDLirla~la~r~g~~~~~~~~~~  438 (494)
                       +..+..|++|++||||+||+|+|||+|++++|||+||+|+++|+|+||+|||||||||+||+|+|+|+|+         
T Consensus       264 -~~d~~v~Igps~Yvp~lgD~K~a~d~i~~~~F~G~~~~i~~~~~~~DS~laAplviDlvrl~~la~~~g~---------  333 (367)
T 1gr0_A          264 -FKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGI---------  333 (367)
T ss_dssp             -----CEECSEEEECGGGTTEEEEEEEEEEEEGGGEEEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHTTC---------
T ss_pred             -CCCCcEEECccccCCcCCCceEEEEEEEeeecCCCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHhcCC---------
Confidence             1123344555599999999999999999999999999999999999999999999999999999999984         


Q ss_pred             ccCCchhhhhhhccCCCCCCCCCccCcHHHHHHHHHHHHH
Q 011047          439 SFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILR  478 (494)
Q Consensus       439 ~~g~V~s~lsy~fKsP~~~~g~~~~~~l~~Q~~~L~n~lr  478 (494)
                       .|++.+++|||||+|++|+      ...++|+++++|++
T Consensus       334 -~G~v~~~ssy~~K~P~~~~------~~~~a~~~~~~fi~  366 (367)
T 1gr0_A          334 -GGPVIPASAYLMKSPPEQL------PDDIARAQLEEFII  366 (367)
T ss_dssp             -CEECHHHHHHHBSSCSSCC------CHHHHHHHHHHHHH
T ss_pred             -CcchhHHHHHHccCCCCCC------CHHHHHHHHHHHhc
Confidence             4689999999999999987      55799999999997


No 6  
>1vjp_A MYO-inositol-1-phosphate synthase-related protein; TM1419, structural genomics, JCSG, PSI, protein structure initiative; HET: NAD; 1.70A {Thermotoga maritima} PDB: 3cin_A*
Probab=100.00  E-value=1.8e-90  Score=709.99  Aligned_cols=362  Identities=20%  Similarity=0.257  Sum_probs=295.9

Q ss_pred             hhhhhhccCcchhHHHHHHHHhhhhhhcCCcccccccccccccccCcccccceeccccCCcccccccccCCCCCCCCCe-
Q 011047           43 LNLGLCLWVGVETTAQLSRVVLSRIESEGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDI-  121 (494)
Q Consensus        43 lGv~lvG~gG~v~TT~~aG~~A~~~~r~gl~w~tk~g~~~~n~~Gsvtq~~t~rlg~~~~~~~~~p~~~~lPl~~~~dl-  121 (494)
                      .-|+++|.| |+||+++.|+...   |++-..          ++|-+                   ..++.|. .|.|+ 
T Consensus        14 ~~~~~~GvG-n~ASslvqGie~y---k~~~~~----------~~Gl~-------------------~~~~~~y-~~~Die   59 (394)
T 1vjp_A           14 VKVLILGQG-YVASTFVAGLEKL---RKGEIE----------PYGVP-------------------LARELPI-GFEDIK   59 (394)
T ss_dssp             EEEEEECCS-HHHHHHHHHHHHH---HTTSSC----------CTTCT-------------------TTTCSSS-CGGGEE
T ss_pred             eeeEEEEeh-HHHHHHHHHHHHH---HcCCCC----------Ccccc-------------------chhccCC-CcCceE
Confidence            357899995 9999999999999   888221          12432                   1122222 23444 


Q ss_pred             eeecccCCCC----CHHHHHHHC-CCCChhHHHHhHHHhhhcCCCCCCCChhhHhhhccccCCCCccC-CHHHHHHHHHH
Q 011047          122 VFGGWDISDM----NLADAMARA-RVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKG-TKKEQMLQIIK  195 (494)
Q Consensus       122 VfGGwDI~~~----~l~ea~~~a-~Vl~~~l~~~v~~~L~~i~p~p~v~~~~fia~nq~~ra~nv~~g-t~~e~ve~ir~  195 (494)
                      ++++|||...    +|+||..+. ..        |.+.|..++-+++.--.-.-.-.  ....+.... +.++.+++|++
T Consensus        60 vvaafDVd~~KVGkdl~eai~~~pn~--------Vp~~l~~V~V~~G~~ldg~~~~~--~~~~~~~e~~s~~e~v~~vv~  129 (394)
T 1vjp_A           60 IVGSYDVDRAKIGKKLSEVVKQYWND--------VDSLTSDPEIRKGVHLGSVRNLP--IEAEGLEDSMTLKEAVDTLVK  129 (394)
T ss_dssp             EEEEEECBTTTTTSBHHHHHHHHCTT--------CCCCSSCCBCEECCCTTTTTTSS--CCBCCGGGSSCHHHHHHHHHH
T ss_pred             EEEEEeccccccCCcHHHHHhhCcCC--------CCcccCCCEEEeccccCcccccc--hhhhccccccchhhHHHHHHH
Confidence            7899999987    889998863 23        33444555555444211110000  001112222 46788888885


Q ss_pred             HHHHHHHhcCCCeEEEEEccCCcccccccCCccccHHHHHHhhhcCC-CCCChhHHHHHHHHh-----cCCCeecCCCCC
Q 011047          196 DIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNE-AEISPSTLYAIACVL-----ENIPFINGSPQN  269 (494)
Q Consensus       196 DIr~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~~al~~n~-~~i~aS~~YA~AAl~-----aG~~fINgtP~~  269 (494)
                      ++++    +++|  ||||++|||||+++     +|.++|+++|++|+ ++||||++||+||++     +|||||||+|+.
T Consensus       130 ~lk~----~~~D--VvIn~~STE~~~p~-----gs~~~l~~ai~~~~~~~i~aS~~YA~AAl~~~~~~aG~~fVN~~P~~  198 (394)
T 1vjp_A          130 EWTE----LDPD--VIVNTCTTEAFVPF-----GNKEDLLKAIENNDKERLTATQVYAYAAALYANKRGGAAFVNVIPTF  198 (394)
T ss_dssp             HHHH----HCCS--EEEECCCCCCCCCC-----SSHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHTCEEEEECSSSC
T ss_pred             HHHH----cCCC--EEEEecCccCCCCC-----CCHHHHHHHHhcCCCCccChHHHHHHHHHhhccccCCcceEecCCcc
Confidence            5544    5678  67799999999943     59999999999998 569999999999999     999999999974


Q ss_pred             C-CchhHHHHHHHhCCccccCCCCCCcchhHHHHHHHHHhcCCceeEEEeeeecCCccccCCCCcccchhhhhhhhhHHh
Q 011047          270 T-FVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVD  348 (494)
Q Consensus       270 t-~ipal~elae~~gvpi~GdD~KSGqT~lks~La~~l~~RGlkv~s~~s~NilGN~Dg~nL~~p~~~~SKeiSKs~vv~  348 (494)
                      + .+|+|.++|+++|+||+|||+|||||++||+|++||++||++|.+||||||||||||+||++|+||+|||+||+++|+
T Consensus       199 ia~~P~~~ela~~~gvpi~GDD~ktGqT~lks~La~~l~~Rglkv~~~~q~NilGN~Dg~nL~~p~~~~SKeiSKs~vv~  278 (394)
T 1vjp_A          199 IANDPAFVELAKENNLVVFGDDGATGATPFTADVLSHLAQRNRYVKDVAQFNIGGNMDFLALTDDGKNKSKEFTKSSIVK  278 (394)
T ss_dssp             STTCHHHHHHHHHTTEEEECSSBSCSHHHHHHHHHHHHHHTTCEEEEEEEEEEECCGGGGSSCHHHHHHHHHHHSCCHHH
T ss_pred             ccCCHHHHHHHHHcCCCEEccccCCCCCchHHHHHHHHHHcCCceeEEEEEeccccchhhhhCCHhHhhhhhhHHHHHHH
Confidence            3 479999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcCCccCCCCCCCcceeeecccCCCCCceeEEEEEeeeecCCCeEEEEEEeeeccccchhhHHHhHHHHHHHHHHhh
Q 011047          349 DMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDSLLAAPIVLDLVLLAELSTRIQ  428 (494)
Q Consensus       349 dil~~~~~ly~~g~~~~h~v~I~YvP~lGD~K~A~d~i~~~gFlG~~~ti~i~~~c~DS~lAApLviDLirla~la~r~g  428 (494)
                      +|++++        .++|+++|+||||+||+|+|||+|++++|||+||+|+++|+|+||+|||||||||+||+|+|+|+|
T Consensus       279 d~l~~~--------~~~hi~~i~Yvp~lGD~K~A~d~ie~~~FlG~~~~i~~~~~~~DS~lAAplviDlvrla~la~~~g  350 (394)
T 1vjp_A          279 DILGYD--------APHYIKPTGYLEPLGDKKFIAIHIEYVSFNGATDELMINGRINDSPALGGLLVDLVRLGKIALDRK  350 (394)
T ss_dssp             HHHSSC--------CCEECCCCEECGGGTTEEEEEEEEEEECGGGCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHhcCC--------CCccccccccCCcCCCceEEEEEEEeeecCCCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHHhc
Confidence            999854        458999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             hhhcCCCcccccCCchhhhhhhccCC-CCCCCCCccCcHHHHHHHHHHHHHHh
Q 011047          429 LKAEGEGKFHSFHPVATILSYLTKAP-LVPPGTPVVNALSKQRAMLENILRAC  480 (494)
Q Consensus       429 ~~~~~~~~~~~~g~V~s~lsy~fKsP-~~~~g~~~~~~l~~Q~~~L~n~lr~~  480 (494)
                                .+|++.+++|||||+| |++  .+. +++.+|+++|++|++.+
T Consensus       351 ----------~~G~v~~~~sy~~K~P~P~~--~~~-~~~~~a~~~l~~f~~~~  390 (394)
T 1vjp_A          351 ----------EFGTVYPVNAFYMKNPGPAE--EKN-IPRIIAYEKMRIWAGLK  390 (394)
T ss_dssp             ----------CCEECHHHHHHHBSSCSSTT--CCC-CCHHHHHHHHHHHTTCC
T ss_pred             ----------CCCcchHHHHHHccCCCCCC--CCC-chHHHHHHHHHHHHhhc
Confidence                      5789999999999999 764  333 47789999999998753


No 7  
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=84.66  E-value=3.5  Score=40.78  Aligned_cols=112  Identities=8%  Similarity=0.004  Sum_probs=60.4

Q ss_pred             cCCCCccCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCcccccccCCccccHHHHH---HhhhcCCCCC---ChhHH
Q 011047          177 RANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLL---ASLDKNEAEI---SPSTL  250 (494)
Q Consensus       177 ra~nv~~gt~~e~ve~ir~DIr~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~---~al~~n~~~i---~aS~~  250 (494)
                      ++|..-.|.+....+.+.+-.++..+ .|.| +|=|..-||.|..+... .....+.+.   +++.+.+-.|   +...-
T Consensus        15 TpDSFsdgg~~~~~~~a~~~a~~~v~-~GAd-iIDIGgestrpga~~v~-~~eE~~Rv~pvi~~l~~~~~piSIDT~~~~   91 (280)
T 1eye_A           15 TDDSFSDGGCYLDLDDAVKHGLAMAA-AGAG-IVDVGGESSRPGATRVD-PAVETSRVIPVVKELAAQGITVSIDTMRAD   91 (280)
T ss_dssp             SCCTTCSSCCCCSHHHHHHHHHHHHH-TTCS-EEEEECC---------------HHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred             CCCCcCCCcccCCHHHHHHHHHHHHH-CCCC-EEEECCccCCCCCCCCC-HHHHHHHHHHHHHHhhcCCCEEEEeCCCHH
Confidence            34444444222223333333345444 6755 55567879987643221 122233322   3443323333   45667


Q ss_pred             HHHHHHhcCCCeecCCCCCCCchhHHHHHHHhCCccccCCC
Q 011047          251 YAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDF  291 (494)
Q Consensus       251 YA~AAl~aG~~fINgtP~~t~ipal~elae~~gvpi~GdD~  291 (494)
                      -|.||+++|++.||-.-.....|.+.+++.+.|+|++.--.
T Consensus        92 va~aAl~aGa~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~  132 (280)
T 1eye_A           92 VARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHW  132 (280)
T ss_dssp             HHHHHHHTTCCEEEETTTTSSCTTHHHHHHHHTCCEEEECC
T ss_pred             HHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcC
Confidence            78999999999999887544589999999999999887544


No 8  
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=83.19  E-value=7.3  Score=38.54  Aligned_cols=137  Identities=10%  Similarity=0.123  Sum_probs=80.8

Q ss_pred             cCCCCccCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCcccccccCCccccHHHHH---HhhhcC-CCCC---ChhH
Q 011047          177 RANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLL---ASLDKN-EAEI---SPST  249 (494)
Q Consensus       177 ra~nv~~gt~~e~ve~ir~DIr~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~---~al~~n-~~~i---~aS~  249 (494)
                      ++|....|.+....+.+.+-.++..+ .|.| +|=|..-||.|..+... ..+.++.+.   +++++. +-.|   +...
T Consensus        24 TpdSFsdgg~~~~~~~a~~~a~~~v~-~GAd-iIDIGgestrPga~~v~-~~eE~~rv~pvi~~l~~~~~~piSIDT~~~  100 (282)
T 1aj0_A           24 TPDSFSDGGTHNSLIDAVKHANLMIN-AGAT-IIDVGGESTRPGAAEVS-VEEELQRVIPVVEAIAQRFEVWISVDTSKP  100 (282)
T ss_dssp             CTTTSCCCCCCTHHHHHHHHHHHHHH-HTCS-EEEEESSCCSTTCCCCC-HHHHHHHHHHHHHHHHHHCCCEEEEECCCH
T ss_pred             CCCccccccccCCHHHHHHHHHHHHH-CCCC-EEEECCCcCCCCCCcCC-HHHHHHHHHHHHHHHHhhcCCeEEEeCCCH
Confidence            34444444333334444444455555 5755 45567879988753322 223333333   333332 2223   4566


Q ss_pred             HHHHHHHhcCCCeecCCCCCCCchhHHHHHHHhCCccccCCCCC-Ccc---------------hhHHHHHHHHHhcCCce
Q 011047          250 LYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKS-GQT---------------KMKSVLVDFLVGAGIKP  313 (494)
Q Consensus       250 ~YA~AAl~aG~~fINgtP~~t~ipal~elae~~gvpi~GdD~KS-GqT---------------~lks~La~~l~~RGlkv  313 (494)
                      --|.||+++|++.||-.-.. ..|.+.+++.+.|+|+..--.+. -+|               .+-...++.+.+.|++.
T Consensus       101 ~va~aAl~aGa~iINdvsg~-~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~  179 (282)
T 1aj0_A          101 EVIRESAKVGAHIINDIRSL-SEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAK  179 (282)
T ss_dssp             HHHHHHHHTTCCEEEETTTT-CSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred             HHHHHHHHcCCCEEEECCCC-CCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCCh
Confidence            77899999999999988753 68999999999999998754421 121               11222445566788886


Q ss_pred             eEEE
Q 011047          314 TSIV  317 (494)
Q Consensus       314 ~s~~  317 (494)
                      ..++
T Consensus       180 ~~Ii  183 (282)
T 1aj0_A          180 EKLL  183 (282)
T ss_dssp             GGEE
T ss_pred             hhEE
Confidence            5443


No 9  
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=82.68  E-value=6.1  Score=39.46  Aligned_cols=114  Identities=10%  Similarity=0.115  Sum_probs=70.9

Q ss_pred             cccCCCCccCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCcccccccCCccccHHHHH---HhhhcC-CCCC---Ch
Q 011047          175 GSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLL---ASLDKN-EAEI---SP  247 (494)
Q Consensus       175 ~~ra~nv~~gt~~e~ve~ir~DIr~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~---~al~~n-~~~i---~a  247 (494)
                      +.++|..-.|.+....+.+.+-.++..+ .|.| +|=|..-||-|-.+... .....+.+.   +++.+. +-.|   +.
T Consensus        47 NvTPDSFsdgg~~~~~~~a~~~a~~~v~-~GAd-iIDIGgeStrPga~~v~-~~eE~~RvvpvI~~l~~~~~vpiSIDT~  123 (297)
T 1tx2_A           47 NVTPDSFSDGGSYNEVDAAVRHAKEMRD-EGAH-IIDIGGESTRPGFAKVS-VEEEIKRVVPMIQAVSKEVKLPISIDTY  123 (297)
T ss_dssp             CCCCCTTCSSCBHHHHHHHHHHHHHHHH-TTCS-EEEEESCC----CCCCC-HHHHHHHHHHHHHHHHHHSCSCEEEECS
T ss_pred             eCCCCccccCCccCCHHHHHHHHHHHHH-cCCC-EEEECCCcCCCCCCCCC-HHHHHHHHHHHHHHHHhcCCceEEEeCC
Confidence            4455555556555555666666666664 6755 55677889988653222 222333334   444442 2223   45


Q ss_pred             hHHHHHHHHhcCCCeecCCCCCCCchhHHHHHHHhCCccccCCC
Q 011047          248 STLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDF  291 (494)
Q Consensus       248 S~~YA~AAl~aG~~fINgtP~~t~ipal~elae~~gvpi~GdD~  291 (494)
                      ..--|.||+++|++.||-.-.....|.+.+++.+.|+|++.--.
T Consensus       124 ~~~V~~aAl~aGa~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~  167 (297)
T 1tx2_A          124 KAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHN  167 (297)
T ss_dssp             CHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHHTCCEEEECC
T ss_pred             CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeC
Confidence            66778999999999999887544589999999999999887543


No 10 
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=76.58  E-value=11  Score=37.68  Aligned_cols=139  Identities=12%  Similarity=0.085  Sum_probs=71.1

Q ss_pred             cccCCCCccCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCcccccccCCccccHHHHH---HhhhcCCCCC---Chh
Q 011047          175 GSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLL---ASLDKNEAEI---SPS  248 (494)
Q Consensus       175 ~~ra~nv~~gt~~e~ve~ir~DIr~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~---~al~~n~~~i---~aS  248 (494)
                      +.++|..-.|.+....+.+.+-.++..+ .|.| +|=|..-||.|..+... .....+.+.   +++.+.+-.|   +..
T Consensus        36 NvTPDSFsdgg~~~~~~~a~~~a~~~v~-~GAd-IIDIGgeSTrPga~~v~-~~eE~~Rv~pvI~~l~~~~vpiSIDT~~  112 (294)
T 2dqw_A           36 NLTPDSFSDGGRYLDPERALERAREMVA-EGAD-ILDLGAESTRPGAAPVP-VEEEKRRLLPVLEAVLSLGVPVSVDTRK  112 (294)
T ss_dssp             ECCC-------------CCHHHHHHHHH-HTCS-EEEEECC------------CCHHHHHHHHHHHHHTTCSCEEEECSC
T ss_pred             eCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCC-EEEECCCcCCCCCCCCC-HHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence            3344444445433333444444445444 5755 55678889988643222 222333333   4444333223   466


Q ss_pred             HHHHHHHHhcCCCeecCCCCCCCchhHHHHHHHhCCccccCCCC--CCcch---------------hHHHHHHHHHhcCC
Q 011047          249 TLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFK--SGQTK---------------MKSVLVDFLVGAGI  311 (494)
Q Consensus       249 ~~YA~AAl~aG~~fINgtP~~t~ipal~elae~~gvpi~GdD~K--SGqT~---------------lks~La~~l~~RGl  311 (494)
                      .--|.||+++|+..||-.-.. ..|.+.+++.+.|+|+..--.+  +-+|.               +=...++.+.+.|+
T Consensus       113 ~~Va~aAl~aGa~iINdVsg~-~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi  191 (294)
T 2dqw_A          113 PEVAEEALKLGAHLLNDVTGL-RDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGV  191 (294)
T ss_dssp             HHHHHHHHHHTCSEEECSSCS-CCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhCCCEEEECCCC-CChHHHHHHHHhCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHHCCC
Confidence            778899999999999998764 7899999999999999875443  22231               11224555667898


Q ss_pred             ceeEEEe
Q 011047          312 KPTSIVS  318 (494)
Q Consensus       312 kv~s~~s  318 (494)
                      + .=+.-
T Consensus       192 ~-~IilD  197 (294)
T 2dqw_A          192 P-QVVLD  197 (294)
T ss_dssp             S-CEEEE
T ss_pred             C-cEEEc
Confidence            8 44444


No 11 
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=72.72  E-value=5  Score=40.01  Aligned_cols=113  Identities=12%  Similarity=0.108  Sum_probs=64.9

Q ss_pred             cccCCCCccCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCcccccccCCccccHHHHH---HhhhcCCCCC---Chh
Q 011047          175 GSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLL---ASLDKNEAEI---SPS  248 (494)
Q Consensus       175 ~~ra~nv~~gt~~e~ve~ir~DIr~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~---~al~~n~~~i---~aS  248 (494)
                      +.++|..-.|.+....+.+.+-.++..+ .|.| +|=|..-||.|..+... .....+.+.   +++.+.+-.|   +..
T Consensus        30 NvTPDSFsdgg~~~~~~~a~~~a~~~v~-~GAd-iIDIGgeSTrPga~~v~-~~eE~~Rv~pvi~~l~~~~vpiSIDT~~  106 (294)
T 2y5s_A           30 NATPDSFSDGGRFLARDDALRRAERMIA-EGAD-LLDIGGESTRPGAPPVP-LDEELARVIPLVEALRPLNVPLSIDTYK  106 (294)
T ss_dssp             ECCC----------CTTHHHHHHHHHHH-TTCS-EEEEESSCCSTTCCCCC-HHHHHHHHHHHHHHHGGGCSCEEEECCC
T ss_pred             eCCCCCCCCCCCcCCHHHHHHHHHHHHH-CCCC-EEEECCCcCCCCCCCCC-HHHHHHHHHHHHHHHhhCCCeEEEECCC
Confidence            3344444445333333333333445554 5755 56678889998653332 222333333   3443322223   456


Q ss_pred             HHHHHHHHhcCCCeecCCCCCCCchhHHHHHHHhCCccccCCC
Q 011047          249 TLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDF  291 (494)
Q Consensus       249 ~~YA~AAl~aG~~fINgtP~~t~ipal~elae~~gvpi~GdD~  291 (494)
                      .--|.||+++|++.||-.-... .|.+.+++.+.|+|++.--.
T Consensus       107 ~~Va~aAl~aGa~iINdVsg~~-d~~m~~~~a~~~~~vVlmh~  148 (294)
T 2y5s_A          107 PAVMRAALAAGADLINDIWGFR-QPGAIDAVRDGNSGLCAMHM  148 (294)
T ss_dssp             HHHHHHHHHHTCSEEEETTTTC-STTHHHHHSSSSCEEEEECC
T ss_pred             HHHHHHHHHcCCCEEEECCCCC-chHHHHHHHHhCCCEEEECC
Confidence            6778999999999999887544 89999999999999887443


No 12 
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=69.95  E-value=9.2  Score=38.37  Aligned_cols=108  Identities=9%  Similarity=0.087  Sum_probs=59.8

Q ss_pred             CCCCccCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCcccccccCCccccHHHHH---HhhhcC-CCCC---ChhHH
Q 011047          178 ANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLL---ASLDKN-EAEI---SPSTL  250 (494)
Q Consensus       178 a~nv~~gt~~e~ve~ir~DIr~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~---~al~~n-~~~i---~aS~~  250 (494)
                      +|..-.|.+....+.+.+-.++..+ .|.| +|=|..-||-|-.+... ....++.+.   ++|++. +-.|   +...-
T Consensus        20 PDSFsdgg~~~~~~~a~~~a~~~v~-~GAd-IIDIGgeSTrPGa~~v~-~~eE~~Rv~pvI~~l~~~~~vpiSIDT~~~~   96 (314)
T 2vef_A           20 PDSFSDGGQFFALEQALQQARKLIA-EGAS-MLDIGGESTRPGSSYVE-IEEEIQRVVPVIKAIRKESDVLISIDTWKSQ   96 (314)
T ss_dssp             C---------CHHHHHHHHHHHHHH-TTCS-EEEEECCC-----CHHH-HHHHHHHHHHHHHHHHHHCCCEEEEECSCHH
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHH-CCCC-EEEECCCcCCCCCCCCC-HHHHHHHHHHHHHHHHhhCCceEEEeCCCHH
Confidence            3433445444344555555566655 6755 55678889988653221 122333333   334432 2223   45667


Q ss_pred             HHHHHHhcCCCeecCCCCCCCchhHHHHHHHhCCcccc
Q 011047          251 YAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGG  288 (494)
Q Consensus       251 YA~AAl~aG~~fINgtP~~t~ipal~elae~~gvpi~G  288 (494)
                      -|.||+++|++.||-.-.....|.+.+++.+.|+|++.
T Consensus        97 Va~aAl~aGa~iINDVsg~~~d~~m~~v~a~~~~~vvl  134 (314)
T 2vef_A           97 VAEAALAAGADLVNDITGLMGDEKMPHVVAEARAQVVI  134 (314)
T ss_dssp             HHHHHHHTTCCEEEETTTTCSCTTHHHHHHHHTCEEEE
T ss_pred             HHHHHHHcCCCEEEECCCCCCChHHHHHHHHcCCCEEE
Confidence            78999999999999877544579999999999998876


No 13 
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=66.12  E-value=27  Score=35.25  Aligned_cols=116  Identities=13%  Similarity=0.125  Sum_probs=70.6

Q ss_pred             HHHHHhcCCCeEEEEEccCCccccc----ccCCccccHHHH---HHhhhcC-CCCC---ChhHHHHHHHHhcCCCeecCC
Q 011047          198 REFKEKNKVDRVVVLWTANTERYSN----VIVGLNDTVENL---LASLDKN-EAEI---SPSTLYAIACVLENIPFINGS  266 (494)
Q Consensus       198 r~Fk~~~~ld~vVVlw~AsTE~~~~----~~~~~~~t~~~l---~~al~~n-~~~i---~aS~~YA~AAl~aG~~fINgt  266 (494)
                      ++..+ .|.| +|=|..-||-|..+    ... .....+.+   .++|++. +-.|   +...--|.||+++|++.||-.
T Consensus        56 ~~~v~-~GAd-IIDIGgeSTrPga~~~~~~V~-~~eE~~Rv~pvI~~l~~~~~vpISIDT~~~~Va~aAl~aGa~iINDV  132 (314)
T 3tr9_A           56 EKMVD-EGAD-ILDIGGEATNPFVDIKTDSPS-TQIELDRLLPVIDAIKKRFPQLISVDTSRPRVMREAVNTGADMINDQ  132 (314)
T ss_dssp             HHHHH-TTCS-EEEEECCCSCTTC-----CHH-HHHHHHHHHHHHHHHHHHCCSEEEEECSCHHHHHHHHHHTCCEEEET
T ss_pred             HHHHH-CCCC-EEEECCCCCCCCcccccCCCC-HHHHHHHHHHHHHHHHhhCCCeEEEeCCCHHHHHHHHHcCCCEEEEC
Confidence            44444 6877 66678889998763    111 11122222   2344332 2223   444567899999999999988


Q ss_pred             CCCCCchhHHHHHHHhCCccccCCCCC-Ccch-----------hH---HHHHHHHHhcCCceeEEE
Q 011047          267 PQNTFVPGLIDLAIRRNCLIGGDDFKS-GQTK-----------MK---SVLVDFLVGAGIKPTSIV  317 (494)
Q Consensus       267 P~~t~ipal~elae~~gvpi~GdD~KS-GqT~-----------lk---s~La~~l~~RGlkv~s~~  317 (494)
                      -... .|.+.+++.+.|+|++--..+. -+|.           +.   ...++.+.+.|++...++
T Consensus       133 sg~~-~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~Ii  197 (314)
T 3tr9_A          133 RALQ-LDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRII  197 (314)
T ss_dssp             TTTC-STTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred             CCCC-chHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHEE
Confidence            7533 7899999999999998655432 2221           11   224456678899866555


No 14 
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=61.96  E-value=44  Score=33.45  Aligned_cols=65  Identities=5%  Similarity=0.005  Sum_probs=41.3

Q ss_pred             HHHHHHHhcCCC---eecCCCCCCCchhHHHHHHHhCCccccCCCCCCcchhHHHHHHHHHhcCCceeEEE
Q 011047          250 LYAIACVLENIP---FINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIV  317 (494)
Q Consensus       250 ~YA~AAl~aG~~---fINgtP~~t~ipal~elae~~gvpi~GdD~KSGqT~lks~La~~l~~RGlkv~s~~  317 (494)
                      --+.||+++|..   .||-.-. ...|.+.+++.+.|+|++.--...  -.+=.-+.+.+.+.|++...++
T Consensus       138 ~V~eaal~aga~~k~iINdvs~-~~~~~~~~~aa~~g~~vv~m~~~d--v~~l~~~~~~a~~~Gi~~e~Ii  205 (310)
T 2h9a_B          138 EIFPVIGEALSGRNCLLSSATK-DNYKPIVATCMVHGHSVVASAPLD--INLSKQLNIMIMEMNLAPNRII  205 (310)
T ss_dssp             HHHHHHHHHTTTSCCEEEEECT-TTHHHHHHHHHHHTCEEEEECSSC--HHHHHHHHHHHHTTTCCGGGEE
T ss_pred             HHHHHHHHhCCCCCCEEEECCC-CccHHHHHHHHHhCCCEEEEChhH--HHHHHHHHHHHHHCCCChhhEE
Confidence            446677777775   8887654 247888888899998887633211  1222335566667777665544


No 15 
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=60.58  E-value=13  Score=37.58  Aligned_cols=112  Identities=10%  Similarity=0.030  Sum_probs=55.9

Q ss_pred             cccCCCCccCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCcccccccCCccccHHHH---HHhhhcC--CCCC---C
Q 011047          175 GSRANNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENL---LASLDKN--EAEI---S  246 (494)
Q Consensus       175 ~~ra~nv~~gt~~e~ve~ir~DIr~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l---~~al~~n--~~~i---~  246 (494)
                      +.+.|..-.|.+....+.+.+-.++..+ .|.| +|=|..-||.|- +... .....+.+   .++|++.  +-.|   +
T Consensus        49 NvTPDSFsdgg~~~~~~~a~~~A~~~v~-~GAd-IIDIGgeSTrPG-~~v~-~~eEl~Rv~pvI~~l~~~~~~vpISIDT  124 (318)
T 2vp8_A           49 NRTPDSFYDKGATFSDAAARDAVHRAVA-DGAD-VIDVGGVKAGPG-ERVD-VDTEITRLVPFIEWLRGAYPDQLISVDT  124 (318)
T ss_dssp             C--------------CHHHHHHHHHHHH-TTCS-EEEEC-----------C-HHHHHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred             eCCCCcccCCCccCCHHHHHHHHHHHHH-CCCC-EEEECCCcCCCC-CCCC-HHHHHHHHHHHHHHHHhhCCCCeEEEeC
Confidence            3344444445444334444444455555 6755 455677799876 2221 22233333   3444443  2223   4


Q ss_pred             hhHHHHHHHHhcCCCeecCCCCCCCchhHHHHHHHhCCccccCCC
Q 011047          247 PSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDF  291 (494)
Q Consensus       247 aS~~YA~AAl~aG~~fINgtP~~t~ipal~elae~~gvpi~GdD~  291 (494)
                      ...--|.||+++|+..||-.-.. ..|.+.+++.+.|+|++.--.
T Consensus       125 ~~~~VaeaAl~aGa~iINDVsg~-~d~~m~~vaa~~g~~vVlmh~  168 (318)
T 2vp8_A          125 WRAQVAKAACAAGADLINDTWGG-VDPAMPEVAAEFGAGLVCAHT  168 (318)
T ss_dssp             SCHHHHHHHHHHTCCEEEETTSS-SSTTHHHHHHHHTCEEEEECC
T ss_pred             CCHHHHHHHHHhCCCEEEECCCC-CchHHHHHHHHhCCCEEEECC
Confidence            55677899999999999988753 389999999999999887443


No 16 
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=60.40  E-value=17  Score=38.13  Aligned_cols=131  Identities=8%  Similarity=0.098  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHhcCCC-eEEEEEccCCcccccc--cCCccccHHHHHHhhhcC-----CCCCChhHHHHHHHHhc
Q 011047          187 KEQMLQIIKDIREFKEKNKVD-RVVVLWTANTERYSNV--IVGLNDTVENLLASLDKN-----EAEISPSTLYAIACVLE  258 (494)
Q Consensus       187 ~e~ve~ir~DIr~Fk~~~~ld-~vVVlw~AsTE~~~~~--~~~~~~t~~~l~~al~~n-----~~~i~aS~~YA~AAl~a  258 (494)
                      +.++++|++....++++.+.+ +|+-|...+.++....  .....++++++.+.-+-+     -+...+..-|+.+|+++
T Consensus        23 ~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~tp~~~~h~~~~~~AL~a  102 (444)
T 3mtj_A           23 GGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELIGGLEPARELVMQAIAN  102 (444)
T ss_dssp             HHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECCCSSTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHc
Confidence            467888888888888877766 4555555555543221  123455666665421100     11123556788999999


Q ss_pred             CCCeecCCCCCCC--chhHHHHHHHhCCccccCCCCCCcchhHHHHHHHHHhcCCceeEEEee
Q 011047          259 NIPFINGSPQNTF--VPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSY  319 (494)
Q Consensus       259 G~~fINgtP~~t~--ipal~elae~~gvpi~GdD~KSGqT~lks~La~~l~~RGlkv~s~~s~  319 (494)
                      |.+.+-.-|..+.  ...+.++|+++|+.+.=.=.-.|..++-+.|-+.+  +|=++.++..+
T Consensus       103 GKhVvtenkal~a~~~~eL~~~A~~~gv~l~~Ea~V~~giPii~~LrelL--~~~~Ig~I~GI  163 (444)
T 3mtj_A          103 GKHVVTANKHLVAKYGNEIFAAAQAKGVMVTFEAAVAGGIPIIKALREGL--TANRIEWLAGI  163 (444)
T ss_dssp             TCEEEECCHHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCHHHHHHTTT--TTSCEEEEEEE
T ss_pred             CCEEEECCcccCHHHHHHHHHHHHHhCCeEEEEEeeeCChHHHHHHHHHH--hCCCCceEEEE
Confidence            9999988784222  47899999999998742222346778888888876  44566666553


No 17 
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=58.44  E-value=44  Score=33.09  Aligned_cols=106  Identities=13%  Similarity=0.219  Sum_probs=60.2

Q ss_pred             CCCccCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCcccccccCCccccHHH---HHHhhhcCCCCCCh---hHHHH
Q 011047          179 NNVIKGTKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVEN---LLASLDKNEAEISP---STLYA  252 (494)
Q Consensus       179 ~nv~~gt~~e~ve~ir~DIr~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~---l~~al~~n~~~i~a---S~~YA  252 (494)
                      |..-.|.+....+...+-.+++.+ .|.| +|=|-.-||=|-.+... ....++.   +.++|++.+-.||-   ..--|
T Consensus        18 DSFsDGG~~~~~~~a~~~a~~m~~-~GAd-iIDIGgeSTRPga~~vs-~eeE~~Rv~pvi~~l~~~~v~iSIDT~~~~Va   94 (270)
T 4hb7_A           18 DSFSDGGKFNNVETAINRVKAMID-EGAD-IIDVGGVSTRPGHEMVT-LEEELNRVLPVVEAIVGFDVKISVDTFRSEVA   94 (270)
T ss_dssp             ---------CHHHHHHHHHHHHHH-TTCS-EEEEESCCCSTTCCCCC-HHHHHHHHHHHHHHHTTSSSEEEEECSCHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHH-CCCC-EEEECCccCCCCCCCCc-hHHHHHHHHHHHHHhhcCCCeEEEECCCHHHH
Confidence            333334333334444444455555 6877 44455669988764332 1122222   23445443333333   23457


Q ss_pred             HHHHhcCCCeecCCCCCCCchhHHHHHHHhCCccc
Q 011047          253 IACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIG  287 (494)
Q Consensus       253 ~AAl~aG~~fINgtP~~t~ipal~elae~~gvpi~  287 (494)
                      .+|+++|+..||=.-.....|.+.+.+.+.++|+.
T Consensus        95 ~~al~aGa~iINDVs~g~~d~~m~~~va~~~~~~v  129 (270)
T 4hb7_A           95 EACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEII  129 (270)
T ss_dssp             HHHHHHTCCEEEETTTTSSCTHHHHHHHHTTCEEE
T ss_pred             HHHHHhccceeccccccccchhHHHHHHHcCCCeE
Confidence            89999999999977654568999999999999987


No 18 
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=56.85  E-value=18  Score=36.30  Aligned_cols=101  Identities=12%  Similarity=0.203  Sum_probs=68.2

Q ss_pred             HHHHHhcCCCeEEEEEccCCcccccccCCccccHHHHHHhhhcC--CCCCChhHHHHHHHHhcC---CCeecCCCCCCCc
Q 011047          198 REFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKN--EAEISPSTLYAIACVLEN---IPFINGSPQNTFV  272 (494)
Q Consensus       198 r~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~~al~~n--~~~i~aS~~YA~AAl~aG---~~fINgtP~~t~i  272 (494)
                      +++-+..+++-++|-          .+-|.|-+.+.+.++|.-.  -+.+.|-.+--   +..|   -.|++|||.    
T Consensus        88 ~~lN~d~~v~GIlVq----------lPLP~~id~~~v~~~I~p~KDVDG~~~~N~G~---l~~g~~~~~~~PcTp~----  150 (300)
T 4a26_A           88 EKLNNDPNCHGIIVQ----------LPLPKHLNENRAIEKIHPHKDADALLPVNVGL---LHYKGREPPFTPCTAK----  150 (300)
T ss_dssp             HHHHTCTTCCEEEEC----------SCCCTTSCHHHHHHTSCGGGCTTCCSHHHHHH---HHCTTCCCSCCCHHHH----
T ss_pred             HHhcCCCCCCEEEEc----------CCCCCCCCHHHHHhhCCcccccccCCcceEEE---eecCCCcCCCCCCCHH----
Confidence            455555555655532          2224566778888888642  23366654432   3233   468999996    


Q ss_pred             hhHHHHHHHhCCccccCCCCC-Ccch-hHHHHHHHHHhcCCceeEE
Q 011047          273 PGLIDLAIRRNCLIGGDDFKS-GQTK-MKSVLVDFLVGAGIKPTSI  316 (494)
Q Consensus       273 pal~elae~~gvpi~GdD~KS-GqT~-lks~La~~l~~RGlkv~s~  316 (494)
                       +..++.++.++++.|...-= |... +=+.+|.+|..+|..|.-.
T Consensus       151 -gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~  195 (300)
T 4a26_A          151 -GVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIV  195 (300)
T ss_dssp             -HHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEE
T ss_pred             -HHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEE
Confidence             89999999999998876433 7654 7889999999999987644


No 19 
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=53.77  E-value=23  Score=35.24  Aligned_cols=101  Identities=15%  Similarity=0.221  Sum_probs=66.7

Q ss_pred             HHHHHhcCCCeEEEEEccCCcccccccCCccccHHHHHHhhhc--CCCCCChhHHHHHHHHhcCCC--eecCCCCCCCch
Q 011047          198 REFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDK--NEAEISPSTLYAIACVLENIP--FINGSPQNTFVP  273 (494)
Q Consensus       198 r~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~~al~~--n~~~i~aS~~YA~AAl~aG~~--fINgtP~~t~ip  273 (494)
                      ++..+.-+++-++|-          .+-|.|-+.+.+.++|.-  +-+.+.|-.+--   +..|-+  |++|||.     
T Consensus        84 ~~lN~d~~v~GIlvq----------lPlp~~id~~~v~~~I~p~KDVDg~~~~N~g~---l~~g~~~g~~PcTp~-----  145 (285)
T 3p2o_A           84 NTLNHDDSVHGILVQ----------LPLPDHICKDLILESIISSKDVDGFHPINVGY---LNLGLESGFLPCTPL-----  145 (285)
T ss_dssp             HHHHHCTTCCEEEEC----------SCCCTTSCHHHHHHHSCGGGCTTCCSHHHHHH---HHTTCCSSCCCHHHH-----
T ss_pred             HHHhCCCCCCEEEec----------CCCCCCcCHHHHHhhCCcccccccCCHhhhhh---hhcCCCCCCCCCCHH-----
Confidence            455554555555532          222356677888888854  223366644332   223332  8899996     


Q ss_pred             hHHHHHHHhCCccccCCCCC-Ccch-hHHHHHHHHHhcCCceeEE
Q 011047          274 GLIDLAIRRNCLIGGDDFKS-GQTK-MKSVLVDFLVGAGIKPTSI  316 (494)
Q Consensus       274 al~elae~~gvpi~GdD~KS-GqT~-lks~La~~l~~RGlkv~s~  316 (494)
                      +..++.++.++.+.|...-= |... +=+.+|.+|..+|..|.-.
T Consensus       146 gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~  190 (285)
T 3p2o_A          146 GVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVC  190 (285)
T ss_dssp             HHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEE
Confidence            88999999999988876432 7654 7899999999999987654


No 20 
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=53.47  E-value=61  Score=31.92  Aligned_cols=118  Identities=13%  Similarity=0.079  Sum_probs=75.1

Q ss_pred             HHHHhcCCCeEEEEEccC--CcccccccCCccccHHHHHHhhhcC--CCCCChhHHH--HHHHHhcCCCe-ecCCCCCCC
Q 011047          199 EFKEKNKVDRVVVLWTAN--TERYSNVIVGLNDTVENLLASLDKN--EAEISPSTLY--AIACVLENIPF-INGSPQNTF  271 (494)
Q Consensus       199 ~Fk~~~~ld~vVVlw~As--TE~~~~~~~~~~~t~~~l~~al~~n--~~~i~aS~~Y--A~AAl~aG~~f-INgtP~~t~  271 (494)
                      .+++ +|.+.|.-+|-..  +|..   -.+++.|.+++.+...-+  ---+||....  +..|++.|+.- |+++|....
T Consensus        33 ~l~~-~G~~~v~~VnP~~~g~~i~---G~~vy~sl~el~~~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~~t~G~~~  108 (305)
T 2fp4_A           33 QALE-YGTNLVGGTTPGKGGKTHL---GLPVFNTVKEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQ  108 (305)
T ss_dssp             HHHH-HTCEEEEEECTTCTTCEET---TEEEESSHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCCCCCH
T ss_pred             HHHH-CCCcEEEEeCCCcCcceEC---CeeeechHHHhhhcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCh
Confidence            4443 6777444666653  3421   224677888877521111  1125666554  44577889998 899995222


Q ss_pred             ch--hHHHHHHHh-CCccccCCC---------CCC------------------cchhHHHHHHHHHhcCCceeEEEeeee
Q 011047          272 VP--GLIDLAIRR-NCLIGGDDF---------KSG------------------QTKMKSVLVDFLVGAGIKPTSIVSYNH  321 (494)
Q Consensus       272 ip--al~elae~~-gvpi~GdD~---------KSG------------------qT~lks~La~~l~~RGlkv~s~~s~Ni  321 (494)
                      -.  .+.+.|+++ |+.+.|...         +.|                  .| +-..+.+.+..||+.+..+++   
T Consensus       109 ~~~~~l~~~a~~~~gi~liGPnc~Gii~p~~~~~~~~~~~~~~~G~va~vSqSG~-l~~~~~~~~~~~g~G~S~~vs---  184 (305)
T 2fp4_A          109 QDMVRVKHRLLRQGKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIVSRSGT-LTYEAVHQTTQVGLGQSLCVG---  184 (305)
T ss_dssp             HHHHHHHHHHTTCSSCEEECSSSCEEEETTTEEEESSCGGGCCEEEEEEEESCSH-HHHHHHHHHHHTTCCEEEEEE---
T ss_pred             HHHHHHHHHHHhcCCcEEEeCCCCeEecccccceeeccccCCCCCCEEEEecchH-HHHHHHHHHHhcCCCeeEEec---
Confidence            23  788999999 999998764         111                  11 234677889999999999988   


Q ss_pred             cCC
Q 011047          322 LGN  324 (494)
Q Consensus       322 lGN  324 (494)
                      +||
T Consensus       185 ~G~  187 (305)
T 2fp4_A          185 IGG  187 (305)
T ss_dssp             CCS
T ss_pred             cCC
Confidence            576


No 21 
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=52.46  E-value=29  Score=34.56  Aligned_cols=84  Identities=15%  Similarity=0.114  Sum_probs=59.5

Q ss_pred             CccccHHHHHHhhhc--CCCCCChhHHHHHHHHhcCCCeecCCCCCCCchhHHHHHHHhCCccccCCCCC-Ccc-hhHHH
Q 011047          226 GLNDTVENLLASLDK--NEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKS-GQT-KMKSV  301 (494)
Q Consensus       226 ~~~~t~~~l~~al~~--n~~~i~aS~~YA~AAl~aG~~fINgtP~~t~ipal~elae~~gvpi~GdD~KS-GqT-~lks~  301 (494)
                      |.|-+.+.+.++|.-  +-+.+.|-.+--...  ..-.|++|||.     +..++.++.++++.|...-= |.. .+=+.
T Consensus       104 P~~id~~~v~~~I~p~KDVDG~~~~N~g~l~~--g~~~~~PcTp~-----gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p  176 (286)
T 4a5o_A          104 PAHLDASLLLERIHPDKDVDGFHPYNIGRLAQ--RMPLLRPCTPK-----GIMTLLASTGADLYGMDAVVVGASNIVGRP  176 (286)
T ss_dssp             CTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHT--TCCSSCCHHHH-----HHHHHHHHTTCCCTTCEEEEECTTSTTHHH
T ss_pred             CCCcCHHHHHhhCCcccccccCChhhhHHHhc--CCCCCCCCCHH-----HHHHHHHHhCCCCCCCEEEEECCCchhHHH
Confidence            356677788888854  223366654332221  23468888886     89999999999998877533 765 47899


Q ss_pred             HHHHHHhcCCceeEE
Q 011047          302 LVDFLVGAGIKPTSI  316 (494)
Q Consensus       302 La~~l~~RGlkv~s~  316 (494)
                      +|.+|..+|-.|.-.
T Consensus       177 lA~lL~~~gAtVtv~  191 (286)
T 4a5o_A          177 MALELLLGGCTVTVT  191 (286)
T ss_dssp             HHHHHHHTTCEEEEE
T ss_pred             HHHHHHHCCCeEEEE
Confidence            999999999988765


No 22 
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=51.87  E-value=9.5  Score=36.81  Aligned_cols=61  Identities=15%  Similarity=0.197  Sum_probs=41.7

Q ss_pred             hHHHHHHHHhcCCCeecCCCCCCCchhHHHHHHHhCCccccCCCCCCcchhHHHHHHHHHhcCCceeEEEe
Q 011047          248 STLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVS  318 (494)
Q Consensus       248 S~~YA~AAl~aG~~fINgtP~~t~ipal~elae~~gvpi~GdD~KSGqT~lks~La~~l~~RGlkv~s~~s  318 (494)
                      +.-.|.+|+++|+.|| .+|+  +.|.+.+.+.+.|+|+.=+ ..| -|-+.++     .+.|......|=
T Consensus        95 t~~~a~~Ai~AGA~fI-vsP~--~~~~vi~~~~~~gi~~ipG-v~T-ptEi~~A-----~~~Gad~vK~FP  155 (232)
T 4e38_A           95 NGEQALAAKEAGATFV-VSPG--FNPNTVRACQEIGIDIVPG-VNN-PSTVEAA-----LEMGLTTLKFFP  155 (232)
T ss_dssp             SHHHHHHHHHHTCSEE-ECSS--CCHHHHHHHHHHTCEEECE-ECS-HHHHHHH-----HHTTCCEEEECS
T ss_pred             CHHHHHHHHHcCCCEE-EeCC--CCHHHHHHHHHcCCCEEcC-CCC-HHHHHHH-----HHcCCCEEEECc
Confidence            3567888999999999 7896  7899999999999997432 211 1111111     356777776643


No 23 
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=49.59  E-value=26  Score=34.94  Aligned_cols=85  Identities=12%  Similarity=0.159  Sum_probs=59.1

Q ss_pred             CccccHHHHHHhhhcC--CCCCChhHHHHHHHHhcCCCeecCCCCCCCchhHHHHHHHhCCccccCCCCC-Ccch-hHHH
Q 011047          226 GLNDTVENLLASLDKN--EAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKS-GQTK-MKSV  301 (494)
Q Consensus       226 ~~~~t~~~l~~al~~n--~~~i~aS~~YA~AAl~aG~~fINgtP~~t~ipal~elae~~gvpi~GdD~KS-GqT~-lks~  301 (494)
                      |.|-+.+.+.++|.-.  -+.+.|-.+-.... ...-.|++|||.     +..++.++.++.+.|...-= |... +=+.
T Consensus       103 p~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~-g~~~~~~PcTp~-----gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p  176 (285)
T 3l07_A          103 PAHINKNNVIYSIKPEKDVDGFHPTNVGRLQL-RDKKCLESCTPK-----GIMTMLREYGIKTEGAYAVVVGASNVVGKP  176 (285)
T ss_dssp             CTTSCHHHHHHHSCGGGBTTCCSHHHHHHHHH-TCTTCCCCHHHH-----HHHHHHHHTTCCCTTCEEEEECCCTTTHHH
T ss_pred             CCCcCHHHHHhhCCcccccccCChhheeehhc-CCCCCCCCCCHH-----HHHHHHHHhCCCCCCCEEEEECCCchhHHH
Confidence            3566778888888542  23366654332222 111568888886     89999999999988876533 7654 7899


Q ss_pred             HHHHHHhcCCceeEE
Q 011047          302 LVDFLVGAGIKPTSI  316 (494)
Q Consensus       302 La~~l~~RGlkv~s~  316 (494)
                      +|.+|..+|..|.-.
T Consensus       177 ~A~lL~~~gAtVtv~  191 (285)
T 3l07_A          177 VSQLLLNAKATVTTC  191 (285)
T ss_dssp             HHHHHHHTTCEEEEE
T ss_pred             HHHHHHHCCCeEEEE
Confidence            999999999987544


No 24 
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=43.43  E-value=83  Score=31.76  Aligned_cols=62  Identities=13%  Similarity=0.024  Sum_probs=39.1

Q ss_pred             HHHHHHHhcCC---CeecCCCCCCCchhHHHHHHHhCCccccC---CCCCCcchhHHHHHHHHHhcCCceeEEE
Q 011047          250 LYAIACVLENI---PFINGSPQNTFVPGLIDLAIRRNCLIGGD---DFKSGQTKMKSVLVDFLVGAGIKPTSIV  317 (494)
Q Consensus       250 ~YA~AAl~aG~---~fINgtP~~t~ipal~elae~~gvpi~Gd---D~KSGqT~lks~La~~l~~RGlkv~s~~  317 (494)
                      --+.+|+++|.   +.||..-. -..|.+.+++.+.|+|++.-   |+     -+-..+...+.+.|++...++
T Consensus       145 eV~eaAleagag~~~lINsv~~-~~~~~m~~laa~~g~~vVlmh~~d~-----~~~~~l~~~a~~~GI~~e~II  212 (323)
T 4djd_D          145 EVLEAVAEAAAGENLLLGNAEQ-ENYKSLTAACMVHKHNIIARSPLDI-----NICKQLNILINEMNLPLDHIV  212 (323)
T ss_dssp             HHHHHHHHHTTTSCCEEEEEBT-TBCHHHHHHHHHHTCEEEEECSSCH-----HHHHHHHHHHHTTTCCGGGEE
T ss_pred             HHHHHHHHhcCCCCCeEEECCc-ccHHHHHHHHHHhCCeEEEEccchH-----HHHHHHHHHHHHcCCCHHHEE
Confidence            44566667664   36775543 12578888888888888772   32     233345567777788766654


No 25 
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=41.99  E-value=2.4e+02  Score=27.37  Aligned_cols=148  Identities=13%  Similarity=0.107  Sum_probs=88.3

Q ss_pred             cCCCeEEEEEccC--CcccccccCCccccHHHHHHhhhcC--CCCCChhHHH--HHHHHhcCCC-eecCCCCCCC--chh
Q 011047          204 NKVDRVVVLWTAN--TERYSNVIVGLNDTVENLLASLDKN--EAEISPSTLY--AIACVLENIP-FINGSPQNTF--VPG  274 (494)
Q Consensus       204 ~~ld~vVVlw~As--TE~~~~~~~~~~~t~~~l~~al~~n--~~~i~aS~~Y--A~AAl~aG~~-fINgtP~~t~--ipa  274 (494)
                      +|...|.-++-..  +|.+   -.+++.|.+++.+...-+  ---++|...+  +..|++.|++ .|.++...+-  ...
T Consensus        36 ~g~~~V~~VnP~~~g~~i~---G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~  112 (294)
T 2yv1_A           36 CGTKIVGGVTPGKGGQNVH---GVPVFDTVKEAVKETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTME  112 (294)
T ss_dssp             TTCCEEEEECTTCTTCEET---TEEEESSHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHH
T ss_pred             CCCeEEEEeCCCCCCceEC---CEeeeCCHHHHhhcCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
Confidence            4666444565443  2321   224678888876622111  1124666544  4567889999 7877763211  347


Q ss_pred             HHHHHHHhCCccccCCCCC----Ccc----------------------hhHHHHHHHHHhcCCceeEEEeeeecCCcc--
Q 011047          275 LIDLAIRRNCLIGGDDFKS----GQT----------------------KMKSVLVDFLVGAGIKPTSIVSYNHLGNND--  326 (494)
Q Consensus       275 l~elae~~gvpi~GdD~KS----GqT----------------------~lks~La~~l~~RGlkv~s~~s~NilGN~D--  326 (494)
                      +.+.|++.|+.+.|..--.    ++-                      -+-..+.+.+..||+.+..+++   +||.-  
T Consensus       113 l~~~A~~~gi~viGPNc~Gii~~~~~~~~~~~~~~~~~G~va~vSqSG~l~~~~~~~~~~~g~G~s~~vs---~G~~~~~  189 (294)
T 2yv1_A          113 FVNYAEDVGVKIIGPNTPGIASPKVGKLGIIPMEVLKEGSVGMVSRSGTLTYEIAHQIKKAGFGVSTCVG---IGGDPIV  189 (294)
T ss_dssp             HHHHHHHHTCEEECSSCCEEEETTTEEEECCCGGGCCEEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEE---CCSSSSC
T ss_pred             HHHHHHHcCCEEEcCCCceeeccCcceeeecccCCCCCCCEEEEECCHHHHHHHHHHHHhCCCCeEEEEe---eCCCCCC
Confidence            8999999999888866221    110                      1334677899999999999988   57632  


Q ss_pred             ccCCCCcccchhhhhhhhhHHhhhhhcCCccCCCCCCCcceeeecccCCCCCce
Q 011047          327 GMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSK  380 (494)
Q Consensus       327 g~nL~~p~~~~SKeiSKs~vv~dil~~~~~ly~~g~~~~h~v~I~YvP~lGD~K  380 (494)
                      +.+.             ..+++-..          ++++..+..=|++..||..
T Consensus       190 ~~~~-------------~d~l~~~~----------~D~~T~~I~l~~E~~g~~~  220 (294)
T 2yv1_A          190 GLRY-------------KEVLDLFE----------KDDETEAIVMIGEIGGGAE  220 (294)
T ss_dssp             SSCH-------------HHHHHHHH----------TCTTCSEEEEEEESSSSHH
T ss_pred             CCCH-------------HHHHHHHh----------cCCCCCEEEEEEeeCCCHH
Confidence            2221             23333333          2445566677888888754


No 26 
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=41.57  E-value=71  Score=32.02  Aligned_cols=91  Identities=13%  Similarity=0.069  Sum_probs=56.6

Q ss_pred             cHHHHHHhhhcCCCC---CChhH--HHHHHHHhcCCCeecCCCCCCCchhHHHHHHHhCCccc-cCCCCCCcchhHHHHH
Q 011047          230 TVENLLASLDKNEAE---ISPST--LYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIG-GDDFKSGQTKMKSVLV  303 (494)
Q Consensus       230 t~~~l~~al~~n~~~---i~aS~--~YA~AAl~aG~~fINgtP~~t~ipal~elae~~gvpi~-GdD~KSGqT~lks~La  303 (494)
                      +.+++++.+++-+--   +|++.  -.+.+|+++|+.|+..+=...-.-.+.+.|+++|+.++ |--+--|   +...++
T Consensus        67 ~~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~~~vD~s~~~~~~~~l~~~Ak~aG~~~l~g~G~dPG---~~~~~a  143 (365)
T 2z2v_A           67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAGFAPG---LSNILM  143 (365)
T ss_dssp             CHHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTCCEEECCCCSSCGGGGHHHHHHTTCEEECSCBTTTB---HHHHHH
T ss_pred             CHHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCCeEEEccCCcHHHHHHHHHHHHcCCEEEECCCCcch---HHHHHH
Confidence            456777777653222   34432  24678999999999977321124578999999999865 2223334   445666


Q ss_pred             HHHHhcCCceeEEEeeeecCCc
Q 011047          304 DFLVGAGIKPTSIVSYNHLGNN  325 (494)
Q Consensus       304 ~~l~~RGlkv~s~~s~NilGN~  325 (494)
                      ..+.++ +.+. ...++++|..
T Consensus       144 ~~~~~~-~~v~-~i~~~~Gglp  163 (365)
T 2z2v_A          144 GRIFQE-LDLK-EGYIYVGGLP  163 (365)
T ss_dssp             HHHHHH-SCEE-EEEEEEEEEE
T ss_pred             HHHHHh-cCCC-EEEEEeccCC
Confidence            666666 6644 4456777764


No 27 
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=40.99  E-value=60  Score=33.06  Aligned_cols=44  Identities=16%  Similarity=0.033  Sum_probs=26.5

Q ss_pred             hHHHHHHHHhcCCCeecCC--C---------------CCCCchhHHHHHHHhCCccccCCC
Q 011047          248 STLYAIACVLENIPFINGS--P---------------QNTFVPGLIDLAIRRNCLIGGDDF  291 (494)
Q Consensus       248 S~~YA~AAl~aG~~fINgt--P---------------~~t~ipal~elae~~gvpi~GdD~  291 (494)
                      +.--|.++.++|+.||-..  |               +.+.++.+.+.+++.++|+..+=+
T Consensus       159 t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GG  219 (366)
T 4fo4_A          159 TAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGG  219 (366)
T ss_dssp             SHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESC
T ss_pred             CHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCC
Confidence            4556788889999998652  2               111123333334456899887643


No 28 
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=40.46  E-value=35  Score=34.09  Aligned_cols=126  Identities=16%  Similarity=0.152  Sum_probs=74.5

Q ss_pred             HHHHHHHHHHHHHHHHhcCCC-eEEEEEccCCcccccc-----------cCCccc--cHHHHHHhhhcCCCC----CChh
Q 011047          187 KEQMLQIIKDIREFKEKNKVD-RVVVLWTANTERYSNV-----------IVGLND--TVENLLASLDKNEAE----ISPS  248 (494)
Q Consensus       187 ~e~ve~ir~DIr~Fk~~~~ld-~vVVlw~AsTE~~~~~-----------~~~~~~--t~~~l~~al~~n~~~----i~aS  248 (494)
                      +.++++|.+.-..+ ++.|.+ +|+-|...+.++..+.           ....++  +.+++.+.   .+.+    .+|+
T Consensus        15 ~~~~~~l~~~~~~l-~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~---~~iDvVv~~tp~   90 (327)
T 3do5_A           15 QGVAELLIRKREEI-EKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRS---ADYDVLIEASVT   90 (327)
T ss_dssp             HHHHHHHHHTHHHH-HHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHH---SCCSEEEECCCC
T ss_pred             HHHHHHHHhhHHHH-HhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcC---CCCCEEEECCCC
Confidence            35666666554555 556666 4555544444443210           011333  56655543   2322    2433


Q ss_pred             -------HHHHHHHHhcCCCeecC--CCCCCCchhHHHHHHHhCCccccCCCCCCcchhHHHHHHHHHhcCCceeEEEe
Q 011047          249 -------TLYAIACVLENIPFING--SPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVS  318 (494)
Q Consensus       249 -------~~YA~AAl~aG~~fINg--tP~~t~ipal~elae~~gvpi~GdD~KSGqT~lks~La~~l~~RGlkv~s~~s  318 (494)
                             .-|+.+|+++|.+.|-.  -|-....+.+.++|+++|+.+.=.=.-.+..++-+.|-+++  +|=++.++..
T Consensus        91 ~~h~~~a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~~ea~v~~g~Pii~~l~~~l--~~~~I~~I~G  167 (327)
T 3do5_A           91 RVDGGEGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEATVGGAMPVVKLAKRYL--ALCEIESVKG  167 (327)
T ss_dssp             C----CHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEECGGGSSTTSCCHHHHHTTT--TTSCEEEEEE
T ss_pred             cccchhHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEEEEEEeeecCHHHHHHHHHh--hCCCccEEEE
Confidence                   45789999999999977  44211257899999999997653323346677777787776  5666666665


No 29 
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=39.42  E-value=51  Score=33.39  Aligned_cols=50  Identities=14%  Similarity=-0.001  Sum_probs=29.7

Q ss_pred             hHHHHHHHHhcCCCeecCC-----------------CCCCCchhHHHHHHHhCCccccCC-CCCCcch
Q 011047          248 STLYAIACVLENIPFINGS-----------------PQNTFVPGLIDLAIRRNCLIGGDD-FKSGQTK  297 (494)
Q Consensus       248 S~~YA~AAl~aG~~fINgt-----------------P~~t~ipal~elae~~gvpi~GdD-~KSGqT~  297 (494)
                      +.--|.+++++|+.+|-..                 |+.+.++.+.+.+++.++||..+= +++++..
T Consensus       155 t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di  222 (361)
T 3khj_A          155 TEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDI  222 (361)
T ss_dssp             SHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHH
T ss_pred             CHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHH
Confidence            4456788889999998752                 221112333344555689988764 3455443


No 30 
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=38.86  E-value=10  Score=36.46  Aligned_cols=30  Identities=27%  Similarity=0.306  Sum_probs=26.5

Q ss_pred             HHHHHhcCCCeecCCCCCCCchhHHHHHHHhCC
Q 011047          252 AIACVLENIPFINGSPQNTFVPGLIDLAIRRNC  284 (494)
Q Consensus       252 A~AAl~aG~~fINgtP~~t~ipal~elae~~gv  284 (494)
                      |.+|+++|+.|| .||.  +.|.+++.|.+.|+
T Consensus        78 a~~ai~AGA~fi-vsP~--~~~evi~~~~~~~v  107 (217)
T 3lab_A           78 FQKAIDAGAQFI-VSPG--LTPELIEKAKQVKL  107 (217)
T ss_dssp             HHHHHHHTCSEE-EESS--CCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCEE-EeCC--CcHHHHHHHHHcCC
Confidence            567778999999 8895  89999999999999


No 31 
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=38.15  E-value=2.3e+02  Score=27.48  Aligned_cols=148  Identities=16%  Similarity=0.166  Sum_probs=87.0

Q ss_pred             cCCCeEEEEEccC--CcccccccCCccccHHHHHH--hhhcCCCCCChhHHH--HHHHHhcCCC-eecCCCCCCC--chh
Q 011047          204 NKVDRVVVLWTAN--TERYSNVIVGLNDTVENLLA--SLDKNEAEISPSTLY--AIACVLENIP-FINGSPQNTF--VPG  274 (494)
Q Consensus       204 ~~ld~vVVlw~As--TE~~~~~~~~~~~t~~~l~~--al~~n~~~i~aS~~Y--A~AAl~aG~~-fINgtP~~t~--ipa  274 (494)
                      +|.+.|..++-..  .|.   .-.+++.|.+++.+  ..+-----++|....  +..|++.|++ .|.+|...+.  ...
T Consensus        30 ~g~~~v~~VnP~~~g~~i---~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~  106 (288)
T 1oi7_A           30 YGTKIVAGVTPGKGGMEV---LGVPVYDTVKEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVR  106 (288)
T ss_dssp             HTCEEEEEECTTCTTCEE---TTEEEESSHHHHHHHSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHH
T ss_pred             cCCeEEEEECCCCCCceE---CCEEeeCCHHHHhhcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
Confidence            4666444565543  332   12246778887765  111101124666544  4567788999 7888874211  347


Q ss_pred             HHHHHHHhCCccccCCCCC----Ccc----------------------hhHHHHHHHHHhcCCceeEEEeeeecCCcc--
Q 011047          275 LIDLAIRRNCLIGGDDFKS----GQT----------------------KMKSVLVDFLVGAGIKPTSIVSYNHLGNND--  326 (494)
Q Consensus       275 l~elae~~gvpi~GdD~KS----GqT----------------------~lks~La~~l~~RGlkv~s~~s~NilGN~D--  326 (494)
                      +.+.|++.|+.+.|..--.    ++-                      -+-..+.+.+..||+....+++   +||.-  
T Consensus       107 l~~~a~~~gi~vigPNc~Gii~~~~~~~~~~~~~~~~~G~va~vsqSG~l~~~~~~~~~~~g~G~s~~vs---~G~~~~~  183 (288)
T 1oi7_A          107 AVEEIKALGSRLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVG---IGGDPVI  183 (288)
T ss_dssp             HHHHHHHHTCEEEESSSCEEEETTTEEEESSCGGGCCEEEEEEEESCHHHHHHHHHHHHHTTCCEEEEEE---CCSSSCC
T ss_pred             HHHHHHHcCCEEEeCCCCeEEcCCCceeEEcccCCCCCCCEEEEECCHHHHHHHHHHHHhCCCCEEEEEe---eCCCcCC
Confidence            8999999999888766321    110                      1334677889999999999988   56632  


Q ss_pred             ccCCCCcccchhhhhhhhhHHhhhhhcCCccCCCCCCCcceeeecccCCCCCce
Q 011047          327 GMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSK  380 (494)
Q Consensus       327 g~nL~~p~~~~SKeiSKs~vv~dil~~~~~ly~~g~~~~h~v~I~YvP~lGD~K  380 (494)
                      +.+.             ..+++-..+          +++..+..=|++..||..
T Consensus       184 ~~~~-------------~d~l~~~~~----------D~~t~~I~l~~E~~~~~~  214 (288)
T 1oi7_A          184 GTTF-------------KDLLPLFNE----------DPETEAVVLIGEIGGSDE  214 (288)
T ss_dssp             SSCH-------------HHHHHHHHT----------CTTCCEEEEEECSSSSHH
T ss_pred             CCCH-------------HHHHHHHhc----------CCCCCEEEEEEeeCCCHH
Confidence            2221             223333332          445566667888888653


No 32 
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=37.91  E-value=66  Score=33.90  Aligned_cols=91  Identities=12%  Similarity=0.084  Sum_probs=56.9

Q ss_pred             HHHHHhcCCCeEEEEEccCCcccccccCCccccHHHH---HHhhhc---C---CCCC---ChhHHHHHHHHh--cCCCe-
Q 011047          198 REFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENL---LASLDK---N---EAEI---SPSTLYAIACVL--ENIPF-  262 (494)
Q Consensus       198 r~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l---~~al~~---n---~~~i---~aS~~YA~AAl~--aG~~f-  262 (494)
                      +++.+ .|.| +|=|..-||.|..+... .....+.+   .++|++   .   +-.|   +...--|.||++  +|++. 
T Consensus       219 ~~mv~-~GAd-IIDIGgeSTrPGa~~Vs-~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~~~VaeaAL~~~aGa~i~  295 (442)
T 3mcm_A          219 DELIQ-SGAE-IIDIGAESTKPDAKPIS-IEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRKLEVMQKILAKHHDIIWM  295 (442)
T ss_dssp             HHHHH-HTCS-EEEEECCCCCC----CC-HHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCCHHHHHHHHHHHGGGCCE
T ss_pred             HHHHH-CCCC-EEEECCCCCCCCCCCCC-HHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCCHHHHHHHHhhCCCCCEE
Confidence            34443 5766 66677889998763322 12223332   344544   1   2223   344567889999  99999 


Q ss_pred             ecCCCCCCCchhHHHHHHHhCCccccCCCC
Q 011047          263 INGSPQNTFVPGLIDLAIRRNCLIGGDDFK  292 (494)
Q Consensus       263 INgtP~~t~ipal~elae~~gvpi~GdD~K  292 (494)
                      ||-.-. ...|.+.+++.+.|+|++--..+
T Consensus       296 INDVsg-~~d~~m~~v~a~~g~~vVlMh~~  324 (442)
T 3mcm_A          296 INDVEC-NNIEQKAQLIAKYNKKYVIIHNL  324 (442)
T ss_dssp             EEECCC-TTHHHHHHHHHHHTCEEEEECC-
T ss_pred             EEcCCC-CCChHHHHHHHHhCCeEEEECCC
Confidence            988765 56899999999999999875543


No 33 
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=34.22  E-value=45  Score=33.91  Aligned_cols=84  Identities=18%  Similarity=0.100  Sum_probs=51.1

Q ss_pred             HHHHHhhhcC-------CCCCChhHHHHHHHHhcCCCeecCC-CCCCC--chhHHHHHHHhCCccccCCCCCCcchhHHH
Q 011047          232 ENLLASLDKN-------EAEISPSTLYAIACVLENIPFINGS-PQNTF--VPGLIDLAIRRNCLIGGDDFKSGQTKMKSV  301 (494)
Q Consensus       232 ~~l~~al~~n-------~~~i~aS~~YA~AAl~aG~~fINgt-P~~t~--ipal~elae~~gvpi~GdD~KSGqT~lks~  301 (494)
                      +.+++||+++       |..++-..-++.+|-+.|+.++..- |...+  ..+.++--.-+.+++.|.|--.|.|..-..
T Consensus       110 ~~I~~Al~~G~nVvsglh~~l~~~pel~~~A~~~Gv~i~dvr~~p~~l~v~~g~i~~i~~~ri~v~GTDt~vGKt~t~~~  189 (350)
T 2g0t_A          110 TLVKKALSLGMDVISGLHFKISQQTEFLKIAHENGTRIIDIRIPPLELDVLRGGIYRKKIKVVGVFGTDCVVGKRTTAVQ  189 (350)
T ss_dssp             HHHHHHHHTTCEEEECCCC--CCHHHHHHHHHHHTCCEEESSSCCSSCCCCCSGGGGCCSEEEEEEESSSSSSHHHHHHH
T ss_pred             HHHHHHHHcCCcEEeCChhhhhCCHHHHHHHHHCCCEEEEeCcCCCcccccccceeeecceEEEEecCCCCccCccHHHH
Confidence            4555666542       2234433335666766777776542 21111  122222122356888999997799999999


Q ss_pred             HHHHHHhcCCceeE
Q 011047          302 LVDFLVGAGIKPTS  315 (494)
Q Consensus       302 La~~l~~RGlkv~s  315 (494)
                      |...|+.+|+++.-
T Consensus       190 L~~~l~~~G~~v~~  203 (350)
T 2g0t_A          190 LWERALEKGIKAGF  203 (350)
T ss_dssp             HHHHHHHTTCCEEE
T ss_pred             HHHHHHhcCCeEEE
Confidence            99999999998744


No 34 
>2k0d_X IMME7, colicin-E7 immunity protein; toxin inhibitor; NMR {Escherichia coli}
Probab=31.80  E-value=24  Score=30.44  Aligned_cols=56  Identities=25%  Similarity=0.363  Sum_probs=41.1

Q ss_pred             CChhHHHHhHHHhhhcCCCCC----CCCh-hhHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHhcCCC
Q 011047          143 FDIDLQKQLRPYMESMVPLPG----IYDP-DFIAANQGSRANNVIKGTKKEQMLQIIKDIREFKEKNKVD  207 (494)
Q Consensus       143 l~~~l~~~v~~~L~~i~p~p~----v~~~-~fia~nq~~ra~nv~~gt~~e~ve~ir~DIr~Fk~~~~ld  207 (494)
                      .+.+.++.+-++...+.+-|.    |||| .+-|+|...+.+.     ...    |.+-|.+||.+||+-
T Consensus        36 ~e~e~~d~Ll~hF~~iteHP~GSDLIfYP~~~~~~~~~~~e~s-----PEg----Ivk~IKeWRa~nGkP   96 (101)
T 2k0d_X           36 ATDDVLDVLLEHFVKITEHPDGTALIYEAAARAAANPGGDGGG-----PEG----IVKEIKEWRAANGKP   96 (101)
T ss_dssp             TCSHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHCSSSTTSS-----GGG----HHHHHHHHHHHHTCC
T ss_pred             cchHHHHHHHHHHHHcCCCCCCCceeeecccccccCCCCCCCC-----HHH----HHHHHHHHHHHcCCc
Confidence            455557888999999999997    7888 6777777555543     333    555568999999974


No 35 
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=31.72  E-value=1.4e+02  Score=29.65  Aligned_cols=102  Identities=19%  Similarity=0.158  Sum_probs=62.8

Q ss_pred             CHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCcccccccCCccccHHHHHHhhhcCCCCCChhHHHHHHHHhcCC--Ce
Q 011047          185 TKKEQMLQIIKDIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENI--PF  262 (494)
Q Consensus       185 t~~e~ve~ir~DIr~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~~al~~n~~~i~aS~~YA~AAl~aG~--~f  262 (494)
                      +..|++++|++=..   .+.+.|-+|   .|.||-+.         .+.|+++|++           |.|..++|+  -|
T Consensus       136 ~~~e~~~ri~Aa~~---A~~~~~~~I---~ARTDa~~---------~~gldeai~R-----------a~ay~~AGAD~if  189 (298)
T 3eoo_A          136 PAGEMVDRIKAAVD---ARTDETFVI---MARTDAAA---------AEGIDAAIER-----------AIAYVEAGADMIF  189 (298)
T ss_dssp             CHHHHHHHHHHHHH---HCSSTTSEE---EEEECTHH---------HHHHHHHHHH-----------HHHHHHTTCSEEE
T ss_pred             CHHHHHHHHHHHHH---hccCCCeEE---EEeehhhh---------hcCHHHHHHH-----------HHhhHhcCCCEEE
Confidence            57899999986432   223566666   68898764         2346667655           223334454  45


Q ss_pred             ecCCCCCCCchhHHHHHHHhCCccccCCCCCCcchhHHHHHHHHHhcCCceeEEE
Q 011047          263 INGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIV  317 (494)
Q Consensus       263 INgtP~~t~ipal~elae~~gvpi~GdD~KSGqT~lks~La~~l~~RGlkv~s~~  317 (494)
                      +-+.+   -...+.+++++-.+|+.-+=...|.|..-+  .+-|.+-|++..++-
T Consensus       190 ~~~~~---~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~--~~eL~~lGv~~v~~~  239 (298)
T 3eoo_A          190 PEAMK---TLDDYRRFKEAVKVPILANLTEFGSTPLFT--LDELKGANVDIALYC  239 (298)
T ss_dssp             ECCCC---SHHHHHHHHHHHCSCBEEECCTTSSSCCCC--HHHHHHTTCCEEEEC
T ss_pred             eCCCC---CHHHHHHHHHHcCCCeEEEeccCCCCCCCC--HHHHHHcCCeEEEEc
Confidence            54433   234566677777899866555446655333  567888898887764


No 36 
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=31.56  E-value=60  Score=35.12  Aligned_cols=81  Identities=7%  Similarity=0.045  Sum_probs=52.4

Q ss_pred             eEEEEEccCCcccccccCCccccHHHH---HHhhhcC------CCCC---ChhHHHHHHHHhcCCCeecCCCCCCCchhH
Q 011047          208 RVVVLWTANTERYSNVIVGLNDTVENL---LASLDKN------EAEI---SPSTLYAIACVLENIPFINGSPQNTFVPGL  275 (494)
Q Consensus       208 ~vVVlw~AsTE~~~~~~~~~~~t~~~l---~~al~~n------~~~i---~aS~~YA~AAl~aG~~fINgtP~~t~ipal  275 (494)
                      .+|=|..-||.|-.+... .....+.+   .++|++.      +-.|   +...--|.||+++|+..||-.-...+.|.+
T Consensus       269 dIIDIGgeSTRPGa~~vs-~eEEl~RvvpvI~~i~~~~~~~~~~vpISIDT~~a~VaeaAl~aGadIINDVsg~~~d~~m  347 (545)
T 2bmb_A          269 VIIDVGGCSTRPNSIQAS-EEEEIRRSIPLIKAIRESTELPQDKVILSIDTYRSNVAKEAIKVGVDIINDISGGLFDSNM  347 (545)
T ss_dssp             EEEEEECSCCSTTCCCCC-HHHHHHHHHHHHHHHHHCSSSCGGGEEEEEECCCHHHHHHHHHTTCCEEEETTTTSSCTTH
T ss_pred             eEEEECCCCCCCCCCCCC-HHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCcHHHHHHHHHcCCCEEEeCCCCcCChHH
Confidence            355566669988763332 12222222   3444431      1112   445567899999999999977654568999


Q ss_pred             HHHHHHh-CCccccC
Q 011047          276 IDLAIRR-NCLIGGD  289 (494)
Q Consensus       276 ~elae~~-gvpi~Gd  289 (494)
                      .+++.+. |+|++--
T Consensus       348 ~~vva~~~~~~vVlm  362 (545)
T 2bmb_A          348 FAVIAENPEICYILS  362 (545)
T ss_dssp             HHHHHTCTTSEEEEE
T ss_pred             HHHHHHhCCCeEEEE
Confidence            9999999 9998764


No 37 
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=30.59  E-value=2.9e+02  Score=24.51  Aligned_cols=44  Identities=14%  Similarity=0.103  Sum_probs=29.6

Q ss_pred             hhhhccCcchhHHHHHHHHhhhhhhc-CCcccccccccccccc-cCcccc
Q 011047           45 LGLCLWVGVETTAQLSRVVLSRIESE-GISWATKDTVQQANYF-GSLTQA   92 (494)
Q Consensus        45 v~lvG~gG~v~TT~~aG~~A~~~~r~-gl~w~tk~g~~~~n~~-Gsvtq~   92 (494)
                      +.+.+..|++|.|.+|.-+|..+.++ |.    |--+.+.++. |++++.
T Consensus         7 I~v~s~kGGvGKTt~a~~LA~~la~~~g~----~VlliD~D~~~~~l~~~   52 (245)
T 3ea0_A            7 FGFVSAKGGDGGSCIAANFAFALSQEPDI----HVLAVDISLPFGDLDMY   52 (245)
T ss_dssp             EEEEESSTTSSHHHHHHHHHHHHTTSTTC----CEEEEECCTTTCCGGGG
T ss_pred             EEEECCCCCcchHHHHHHHHHHHHhCcCC----CEEEEECCCCCCCHHHH
Confidence            34567778999999988888867666 63    2335566665 666553


No 38 
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=29.92  E-value=34  Score=30.65  Aligned_cols=56  Identities=11%  Similarity=0.066  Sum_probs=39.8

Q ss_pred             HHHHHHhcCCCeecCCCCCCCchhHHHHHHHhCCccccCCCCCCcchhHHHHHHHHHhcCCceeEE
Q 011047          251 YAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSI  316 (494)
Q Consensus       251 YA~AAl~aG~~fINgtP~~t~ipal~elae~~gvpi~GdD~KSGqT~lks~La~~l~~RGlkv~s~  316 (494)
                      -+..|+++|+.|| .+|.  +.+.+.+.+++.|+|+.- +..|++.      +......|......
T Consensus        75 ~~~~a~~~Gad~i-v~~~--~~~~~~~~~~~~g~~vi~-g~~t~~e------~~~a~~~Gad~vk~  130 (205)
T 1wa3_A           75 QCRKAVESGAEFI-VSPH--LDEEISQFCKEKGVFYMP-GVMTPTE------LVKAMKLGHTILKL  130 (205)
T ss_dssp             HHHHHHHHTCSEE-ECSS--CCHHHHHHHHHHTCEEEC-EECSHHH------HHHHHHTTCCEEEE
T ss_pred             HHHHHHHcCCCEE-EcCC--CCHHHHHHHHHcCCcEEC-CcCCHHH------HHHHHHcCCCEEEE
Confidence            4688889999999 8884  668899999999999987 3434322      22234667665543


No 39 
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=29.83  E-value=38  Score=33.45  Aligned_cols=65  Identities=15%  Similarity=0.060  Sum_probs=42.0

Q ss_pred             HHHHHHhcCCCeecCCCCCCCchhHHHHHHHhCCccccCCCCC-CcchhHHHHHHHHHhcCCceeEEEee
Q 011047          251 YAIACVLENIPFINGSPQNTFVPGLIDLAIRRNCLIGGDDFKS-GQTKMKSVLVDFLVGAGIKPTSIVSY  319 (494)
Q Consensus       251 YA~AAl~aG~~fINgtP~~t~ipal~elae~~gvpi~GdD~KS-GqT~lks~La~~l~~RGlkv~s~~s~  319 (494)
                      -|.||+++|+.||..+=.....-.+.+.|+++|+.++-+=+-. |   +-..++..+.++ ++..+...+
T Consensus        93 v~~~~~~~g~~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~G~~PG---~~~~~a~~~~~~-~~~~~~~~~  158 (365)
T 3abi_A           93 SIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAGFAPG---LSNILMGRIFQE-LDLKEGYIY  158 (365)
T ss_dssp             HHHHHHHHTCEEEECCCCSSCGGGGHHHHHHTTCEEECCCBTTTB---HHHHHHHHHHHH-SCEEEEEEE
T ss_pred             HHHHHHhcCcceEeeeccchhhhhhhhhhccCCceeeecCCCCCc---hHHHHHHHHHHh-ccccceeEE
Confidence            3678999999999876432345678899999998776433222 5   334556665554 455554443


No 40 
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=29.59  E-value=71  Score=29.20  Aligned_cols=65  Identities=12%  Similarity=0.104  Sum_probs=35.9

Q ss_pred             HHHHHHHhcCCCeEEEEEccCCcccccccCCccccHHHHHHhhhcCCCCCChhHHHHHHHHhcCCCeecCCCCCCCchhH
Q 011047          196 DIREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIACVLENIPFINGSPQNTFVPGL  275 (494)
Q Consensus       196 DIr~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~~al~~n~~~i~aS~~YA~AAl~aG~~fINgtP~~t~ipal  275 (494)
                      .+++..+++|+.-+ .+.....           .+.+.+++.++              .|-..||++|.+.|....+..+
T Consensus        65 ~~~~~l~~~gl~i~-~~~~~~~-----------~~~~~~~~~i~--------------~A~~lGa~~v~~~p~~~~l~~l  118 (257)
T 3lmz_A           65 AFHDKCAAHKVTGY-AVGPIYM-----------KSEEEIDRAFD--------------YAKRVGVKLIVGVPNYELLPYV  118 (257)
T ss_dssp             HHHHHHHHTTCEEE-EEEEEEE-----------CSHHHHHHHHH--------------HHHHHTCSEEEEEECGGGHHHH
T ss_pred             HHHHHHHHcCCeEE-EEecccc-----------CCHHHHHHHHH--------------HHHHhCCCEEEecCCHHHHHHH
Confidence            34555666998644 3432211           34555555543              3446799999987752224445


Q ss_pred             HHHHHHhCCcc
Q 011047          276 IDLAIRRNCLI  286 (494)
Q Consensus       276 ~elae~~gvpi  286 (494)
                      .++|++.|+.+
T Consensus       119 ~~~a~~~gv~l  129 (257)
T 3lmz_A          119 DKKVKEYDFHY  129 (257)
T ss_dssp             HHHHHHHTCEE
T ss_pred             HHHHHHcCCEE
Confidence            55555555543


No 41 
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=29.11  E-value=51  Score=28.56  Aligned_cols=82  Identities=11%  Similarity=-0.023  Sum_probs=47.8

Q ss_pred             cCCCeEEEEEccCCcccccccCCccccHHHHHHhhhcCCCCCChhHHHHHH--HHhcCCCeecCCCCCCCchhHHHHHHH
Q 011047          204 NKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIA--CVLENIPFINGSPQNTFVPGLIDLAIR  281 (494)
Q Consensus       204 ~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~~al~~n~~~i~aS~~YA~A--Al~aG~~fINgtP~~t~ipal~elae~  281 (494)
                      .|. +|+.+|....|..   -.+++.|.+++.+.++-----+++....+..  +++.|+.-|=..++ ++...+.++|++
T Consensus        40 ~G~-~V~~vnp~~~~i~---G~~~~~s~~el~~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~~-~~~~~l~~~a~~  114 (138)
T 1y81_A           40 KGF-EVLPVNPNYDEIE---GLKCYRSVRELPKDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQPG-AESEEIRRFLEK  114 (138)
T ss_dssp             TTC-EEEEECTTCSEET---TEECBSSGGGSCTTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECTT-SCCHHHHHHHHH
T ss_pred             CCC-EEEEeCCCCCeEC---CeeecCCHHHhCCCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCc-cHHHHHHHHHHH
Confidence            565 4776666544431   1124556665544322111125666555444  66677764333333 567889999999


Q ss_pred             hCCccccCC
Q 011047          282 RNCLIGGDD  290 (494)
Q Consensus       282 ~gvpi~GdD  290 (494)
                      +|+.++|..
T Consensus       115 ~Gi~~igpn  123 (138)
T 1y81_A          115 AGVEYSFGR  123 (138)
T ss_dssp             HTCEEECSC
T ss_pred             CCCEEEcCC
Confidence            999999865


No 42 
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=26.70  E-value=58  Score=28.21  Aligned_cols=82  Identities=9%  Similarity=-0.033  Sum_probs=48.1

Q ss_pred             cCCCeEEEEEccCCcccccccCCccccHHHHHHhhhcCCCCCChhHHHH--HHHHhcCCCeecCCCCCCCchhHHHHHHH
Q 011047          204 NKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYA--IACVLENIPFINGSPQNTFVPGLIDLAIR  281 (494)
Q Consensus       204 ~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~~al~~n~~~i~aS~~YA--~AAl~aG~~fINgtP~~t~ipal~elae~  281 (494)
                      .|. +|+-++....|..   -.+++.+.+++.+.++--.--+++.....  .+|++.|+..|=..|. +.-..+.++|++
T Consensus        48 ~G~-~v~~Vnp~~~~i~---G~~~y~sl~~l~~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~g-~~~~~l~~~a~~  122 (144)
T 2d59_A           48 HGY-DVYPVNPKYEEVL---GRKCYPSVLDIPDKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQYN-TYNREASKKADE  122 (144)
T ss_dssp             TTC-EEEEECTTCSEET---TEECBSSGGGCSSCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECTT-CCCHHHHHHHHH
T ss_pred             CCC-EEEEECCCCCeEC---CeeccCCHHHcCCCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECCC-chHHHHHHHHHH
Confidence            566 4666665543331   11355566655432211111246655443  3477788876655554 456889999999


Q ss_pred             hCCccccCC
Q 011047          282 RNCLIGGDD  290 (494)
Q Consensus       282 ~gvpi~GdD  290 (494)
                      +|+.+.|..
T Consensus       123 ~Gi~vvGpn  131 (144)
T 2d59_A          123 AGLIIVANR  131 (144)
T ss_dssp             TTCEEEESC
T ss_pred             cCCEEEcCC
Confidence            999999865


No 43 
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=26.14  E-value=1.8e+02  Score=28.09  Aligned_cols=149  Identities=11%  Similarity=0.075  Sum_probs=87.0

Q ss_pred             cCCCeEEEEEccC--CcccccccCCccccHHHHHHh--hhcCCCCCChhHH--HHHHHHhcCCCe-ecCCCCCCC--chh
Q 011047          204 NKVDRVVVLWTAN--TERYSNVIVGLNDTVENLLAS--LDKNEAEISPSTL--YAIACVLENIPF-INGSPQNTF--VPG  274 (494)
Q Consensus       204 ~~ld~vVVlw~As--TE~~~~~~~~~~~t~~~l~~a--l~~n~~~i~aS~~--YA~AAl~aG~~f-INgtP~~t~--ipa  274 (494)
                      ++.+.|..++-..  .|.+   --+++.|.+++.+.  ++-----+||...  .+..|+++|+.. |.+++..+.  ...
T Consensus        30 ~g~~~V~~V~p~~~g~~~~---G~~vy~sl~el~~~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~  106 (288)
T 2nu8_A           30 YGTKMVGGVTPGKGGTTHL---GLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLT  106 (288)
T ss_dssp             HTCEEEEEECTTCTTCEET---TEEEESSHHHHHHHHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHH
T ss_pred             CCCeEEEEeCCCcccceeC---CeeccCCHHHHhhcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
Confidence            3555444555542  2321   12367788777652  2110111455544  356678899995 888874222  237


Q ss_pred             HHHHHHHhCCccccCCC---------CC----------C-------cchhHHHHHHHHHhcCCceeEEEeeeecCCcccc
Q 011047          275 LIDLAIRRNCLIGGDDF---------KS----------G-------QTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGM  328 (494)
Q Consensus       275 l~elae~~gvpi~GdD~---------KS----------G-------qT~lks~La~~l~~RGlkv~s~~s~NilGN~Dg~  328 (494)
                      +.+.|+++|+.+.|...         +.          |       ---+...+...+..+|+.+..+++   +||.-  
T Consensus       107 l~~~A~~~gv~liGPNc~Gi~~p~~~~~~~~~~~~~~~G~i~~vsqSG~l~~~~~~~~~~~g~G~s~~vs---~G~~~--  181 (288)
T 2nu8_A          107 VKVKLDEAGVRMIGPNTPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVG---IGGDP--  181 (288)
T ss_dssp             HHHHHHHHTCEEECSSCCEEEETTTEEEESSCTTSCCEEEEEEEESCHHHHHHHHHHHHHTTCCEEEEEE---CCSSS--
T ss_pred             HHHHHHHcCCEEEecCCcceecCCcceeEecccCCCCCCCEEEEECcHHHHHHHHHHHHhcCCCEEEEEe---eCCCc--
Confidence            89999999998888765         10          1       011346677888999999999987   56611  


Q ss_pred             CCCCcccchhhhhhhhhHHhhhhhcCCccCCCCCCCcceeeecccCCCCCc
Q 011047          329 NLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDS  379 (494)
Q Consensus       329 nL~~p~~~~SKeiSKs~vv~dil~~~~~ly~~g~~~~h~v~I~YvP~lGD~  379 (494)
                         +..      ++-..+++-..+          +++..+..=|++..||.
T Consensus       182 ---~~~------~~~~d~l~~l~~----------D~~t~~I~l~~E~~~~~  213 (288)
T 2nu8_A          182 ---IPG------SNFIDILEMFEK----------DPQTEAIVMIGEIGGSA  213 (288)
T ss_dssp             ---SCS------SCHHHHHHHHHT----------CTTCCEEEEEEESSSSH
T ss_pred             ---CCC------CCHHHHHHHHhc----------CCCCCEEEEEEeeCCCH
Confidence               000      122445554442          34556667788888864


No 44 
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=25.93  E-value=75  Score=33.39  Aligned_cols=50  Identities=14%  Similarity=0.043  Sum_probs=31.6

Q ss_pred             hHHHHHHHHhcCCCeecC-----------------CCCCCCchhHHHHHHHhCCccccC-CCCCCcch
Q 011047          248 STLYAIACVLENIPFING-----------------SPQNTFVPGLIDLAIRRNCLIGGD-DFKSGQTK  297 (494)
Q Consensus       248 S~~YA~AAl~aG~~fINg-----------------tP~~t~ipal~elae~~gvpi~Gd-D~KSGqT~  297 (494)
                      +.-.|.+++++|+.+|-.                 .|+.+.++.+.+.+++.++|+..+ .+++++-.
T Consensus       282 t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di  349 (496)
T 4fxs_A          282 TAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDI  349 (496)
T ss_dssp             SHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHH
T ss_pred             cHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHH
Confidence            556788899999999842                 232222345555555678999886 34455444


No 45 
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=23.83  E-value=50  Score=31.63  Aligned_cols=45  Identities=16%  Similarity=0.087  Sum_probs=37.6

Q ss_pred             hCCccccCCCCCCcchhHHHHHHHHHhcCCceeEEEeeeecCCcc
Q 011047          282 RNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNND  326 (494)
Q Consensus       282 ~gvpi~GdD~KSGqT~lks~La~~l~~RGlkv~s~~s~NilGN~D  326 (494)
                      +.+.|.|-|--+|-|.+-..|+..|+.+|++|.-+=-.+.+-+.|
T Consensus        27 ~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~   71 (251)
T 3fgn_A           27 TILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARG   71 (251)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGT
T ss_pred             CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCC
Confidence            468899999999999999999999999999998876666554333


No 46 
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=23.69  E-value=38  Score=31.65  Aligned_cols=42  Identities=19%  Similarity=0.245  Sum_probs=35.7

Q ss_pred             hCCccccCCCCCCcchhHHHHHHHHHhcCCceeEEEeeeecC
Q 011047          282 RNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLG  323 (494)
Q Consensus       282 ~gvpi~GdD~KSGqT~lks~La~~l~~RGlkv~s~~s~NilG  323 (494)
                      +++.|.|.|--+|-|.+-..|+..|+.+|.+|.-+=-.+.+.
T Consensus         5 k~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~KPv~~g~   46 (228)
T 3of5_A            5 KKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLKPVASGQ   46 (228)
T ss_dssp             EEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEECSEEESB
T ss_pred             cEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEecceeecC
Confidence            467899999999999999999999999999998765455543


No 47 
>2kxe_A DNA polymerase II small subunit; D-family, archara, helical BU transferase; HET: DNA; NMR {Pyrococcus horikoshii}
Probab=22.41  E-value=56  Score=26.50  Aligned_cols=63  Identities=29%  Similarity=0.406  Sum_probs=46.5

Q ss_pred             HHHHHhhhcCCCCCChhHHHHHHHH-hcCCCeecCCCCCCC-chhHHHHHHHhCCccccCCCCCCcchhHHHHHHHHHhc
Q 011047          232 ENLLASLDKNEAEISPSTLYAIACV-LENIPFINGSPQNTF-VPGLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGA  309 (494)
Q Consensus       232 ~~l~~al~~n~~~i~aS~~YA~AAl-~aG~~fINgtP~~t~-ipal~elae~~gvpi~GdD~KSGqT~lks~La~~l~~R  309 (494)
                      ++|.+++-.|.--|+||..|-..-- +.|          -| ++.++..|+.+|.+|.-+++          --+||++.
T Consensus         5 delVk~L~~n~YLiTPsAYyLL~~~ykkg----------~FsL~ELiKFAksrgtFvId~~l----------A~EFL~~k   64 (75)
T 2kxe_A            5 DEFVKGLMKNGYLITPSAYYLLVGHFNEG----------KFSLIELIKFAKSRETFIIDDEI----------ANEFLKSI   64 (75)
T ss_dssp             CHHHHHHHTTTCEECHHHHHHHHHHHHTT----------SSCHHHHHHHHHHHTCSEECHHH----------HHHHHHHH
T ss_pred             HHHHHHHHHCCceeCchHHHHHHHHhhcc----------cccHHHHHHHHHhcCcEEechHH----------HHHHHHhc
Confidence            4578888888888999999865443 222          13 67999999999999876543          34788888


Q ss_pred             CCcee
Q 011047          310 GIKPT  314 (494)
Q Consensus       310 Glkv~  314 (494)
                      |+.|.
T Consensus        65 G~~~~   69 (75)
T 2kxe_A           65 GAEVE   69 (75)
T ss_dssp             TCCCC
T ss_pred             Cceec
Confidence            87653


No 48 
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=22.20  E-value=80  Score=32.15  Aligned_cols=85  Identities=12%  Similarity=-0.020  Sum_probs=54.3

Q ss_pred             cHHHHHHhhhcC-------CCCCChhHHHHHHHHhcCCCeecCC-CCCC--CchhHHHHHHHhCCccccCCCCCCcchhH
Q 011047          230 TVENLLASLDKN-------EAEISPSTLYAIACVLENIPFINGS-PQNT--FVPGLIDLAIRRNCLIGGDDFKSGQTKMK  299 (494)
Q Consensus       230 t~~~l~~al~~n-------~~~i~aS~~YA~AAl~aG~~fINgt-P~~t--~ipal~elae~~gvpi~GdD~KSGqT~lk  299 (494)
                      -.+.+++||+.+       |..++--.-++.+|-+ |+.+...- |...  ...+..+.-.-+.+++.|.|---|-|..-
T Consensus        92 ~~~~i~~Al~~G~~Vvsglh~~l~~~pel~~~A~~-g~~i~dvr~pp~~l~~~~g~~~~v~~k~i~v~GTD~~VGK~~ts  170 (349)
T 2obn_A           92 YWIELKTALQAGMSLVNGLHTPLANIPDLNALLQP-GQLIWDVRKEPANLDVASGAARTLPCRRVLTVGTDMAIGKMSTS  170 (349)
T ss_dssp             GHHHHHHHHHTTCEEEECSSSCCTTCHHHHHHCCT-TCCEEETTCCCSSCCCCCSGGGGCSSEEEEEEESSSSSSHHHHH
T ss_pred             HHHHHHHHHHcCCcEEeCccchhhCCHHHHHHHHc-CCEEEEeccCcccccccccceeeecceEEEEcCCCccccceeHH
Confidence            345566666653       3333322226666666 88886654 2211  12233322224568899999888999999


Q ss_pred             HHHHHHHHhcCCceeE
Q 011047          300 SVLVDFLVGAGIKPTS  315 (494)
Q Consensus       300 s~La~~l~~RGlkv~s  315 (494)
                      ..|...|+.||+++.-
T Consensus       171 ~~L~~~l~~~G~~a~~  186 (349)
T 2obn_A          171 LELHWAAKLRGWRSKF  186 (349)
T ss_dssp             HHHHHHHHHTTCCEEE
T ss_pred             HHHHHHHHhcCCcEEE
Confidence            9999999999998765


No 49 
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=21.77  E-value=2.6e+02  Score=26.63  Aligned_cols=23  Identities=35%  Similarity=0.551  Sum_probs=19.8

Q ss_pred             chhHHHHHHHhCCccccCCCCCC
Q 011047          272 VPGLIDLAIRRNCLIGGDDFKSG  294 (494)
Q Consensus       272 ipal~elae~~gvpi~GdD~KSG  294 (494)
                      +..+.++|+++|+++.=|+.-+|
T Consensus       206 l~~l~~l~~~~~~~li~De~~~~  228 (406)
T 4adb_A          206 LQGLRELCNRHNALLIFDEVQTG  228 (406)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTT
T ss_pred             HHHHHHHHHHcCCEEEEeccccC
Confidence            57899999999999999987763


No 50 
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=21.07  E-value=80  Score=32.49  Aligned_cols=27  Identities=19%  Similarity=0.218  Sum_probs=22.4

Q ss_pred             CcchhHHHHHHHHHhcCCceeEEEeee
Q 011047          294 GQTKMKSVLVDFLVGAGIKPTSIVSYN  320 (494)
Q Consensus       294 GqT~lks~La~~l~~RGlkv~s~~s~N  320 (494)
                      |-|-.++.|+.+|...|.++....+-|
T Consensus       124 GKTTTt~ml~~iL~~~G~~~~~~~~g~  150 (469)
T 1j6u_A          124 GKTTTTAMVAHVLKHLRKSPTVFLGGI  150 (469)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred             CHHHHHHHHHHHHHHcCCCceEEECCe
Confidence            888999999999999999985554544


No 51 
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=21.04  E-value=1.8e+02  Score=29.05  Aligned_cols=104  Identities=17%  Similarity=0.234  Sum_probs=69.4

Q ss_pred             HHHHHHhcCCCeEEEEEccCCcccccccCCcc--ccHHHHHHhhhcC--CCCCChhHHHHHHHHhc-CCCeecCCCCCCC
Q 011047          197 IREFKEKNKVDRVVVLWTANTERYSNVIVGLN--DTVENLLASLDKN--EAEISPSTLYAIACVLE-NIPFINGSPQNTF  271 (494)
Q Consensus       197 Ir~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~--~t~~~l~~al~~n--~~~i~aS~~YA~AAl~a-G~~fINgtP~~t~  271 (494)
                      |+++-+...+|-++|-          .+-|.|  -+.+.+.++|.-.  -+-+.|-.+--.+. .. .-.|+=|||.   
T Consensus        85 I~~lN~D~~V~GIlvq----------lPLP~~~~id~~~i~~~I~p~KDVDG~hp~N~G~l~~-g~~~~~~~PcTp~---  150 (301)
T 1a4i_A           85 ITSLNEDSTVHGFLVQ----------LPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLAR-GDLNDCFIPCTPK---  150 (301)
T ss_dssp             HHHHHHCTTCCEEEEC----------SSCCCSSCCCHHHHHHTSCGGGBTTCCSHHHHHHHHT-TCCSSCCCCHHHH---
T ss_pred             HHHhcCCCCCcEEEEe----------ccCCCCCccCHHHHHhccCCCCCccCCChhhHHHHhc-CCCCCCccCchHH---
Confidence            3566666777777753          222456  6778888888532  23366665544432 11 0347777775   


Q ss_pred             chhHHHHHHHhCCccccCCCCC-Ccc-hhHHHHHHHHHhcCCceeEE
Q 011047          272 VPGLIDLAIRRNCLIGGDDFKS-GQT-KMKSVLVDFLVGAGIKPTSI  316 (494)
Q Consensus       272 ipal~elae~~gvpi~GdD~KS-GqT-~lks~La~~l~~RGlkv~s~  316 (494)
                        +..++.++.++.+.|...-= |.. .+=+-+|.+|..+|-+|.-.
T Consensus       151 --gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~  195 (301)
T 1a4i_A          151 --GCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTC  195 (301)
T ss_dssp             --HHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEE
T ss_pred             --HHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEE
Confidence              89999999999888876433 777 57888999999999887654


No 52 
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=20.99  E-value=84  Score=30.63  Aligned_cols=70  Identities=17%  Similarity=0.123  Sum_probs=46.1

Q ss_pred             hhHHHHHHHHhc--CCCeecCCCCCCCc--hhHHHHHHHhCCccccCCCC-CC--cc-----hhHHHHHHHHHhcCCcee
Q 011047          247 PSTLYAIACVLE--NIPFINGSPQNTFV--PGLIDLAIRRNCLIGGDDFK-SG--QT-----KMKSVLVDFLVGAGIKPT  314 (494)
Q Consensus       247 aS~~YA~AAl~a--G~~fINgtP~~t~i--pal~elae~~gvpi~GdD~K-SG--qT-----~lks~La~~l~~RGlkv~  314 (494)
                      ...--+.||+++  |.+.||-..... .  |.+.+++.+.|+|+..--+. .|  +|     .+=.-+.+.+.+.|++..
T Consensus        86 ~~~~v~~aal~a~~Ga~iINdvs~~~-d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~  164 (271)
T 2yci_X           86 TNPDAIEAGLKVHRGHAMINSTSADQ-WKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMT  164 (271)
T ss_dssp             SCHHHHHHHHHHCCSCCEEEEECSCH-HHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred             CCHHHHHHHHHhCCCCCEEEECCCCc-cccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcc
Confidence            344456778888  999999665322 4  88999999999999884441 12  22     122235566678888875


Q ss_pred             EEE
Q 011047          315 SIV  317 (494)
Q Consensus       315 s~~  317 (494)
                      .++
T Consensus       165 ~Ii  167 (271)
T 2yci_X          165 ELY  167 (271)
T ss_dssp             GEE
T ss_pred             cEE
Confidence            554


No 53 
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=20.96  E-value=2.1e+02  Score=29.56  Aligned_cols=147  Identities=14%  Similarity=0.176  Sum_probs=87.4

Q ss_pred             cCCCeEEEEEccCCcccccccCCccccHHHHHHhhhcCCCCCChhHHH--HHHHHhcCCCe-ecCCCCCC--C------c
Q 011047          204 NKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNEAEISPSTLY--AIACVLENIPF-INGSPQNT--F------V  272 (494)
Q Consensus       204 ~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~~al~~n~~~i~aS~~Y--A~AAl~aG~~f-INgtP~~t--~------i  272 (494)
                      +|--+|.-||-...|..-   .+++.|.+++.+.++--.=-++|....  +..|++.|+.. |..+....  -      -
T Consensus        34 ~g~~~v~pVnP~~~~i~G---~~~y~sl~~lp~~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~  110 (457)
T 2csu_A           34 YKKGKVYPVNIKEEEVQG---VKAYKSVKDIPDEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREE  110 (457)
T ss_dssp             CCSSEEEEECSSCSEETT---EECBSSTTSCSSCCSEEEECSCHHHHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHH
T ss_pred             cCCCEEEEECCCCCeECC---EeccCCHHHcCCCCCEEEEecCHHHHHHHHHHHHHcCCCEEEEecCCCCccccccHHHH
Confidence            554567777776555421   235666655543221101114666543  44577789986 44443211  1      3


Q ss_pred             hhHHHHHHHhCCccccCCC----------CC--------C--------cchhHHHHHHHHHhcCCceeEEEeeeecCCcc
Q 011047          273 PGLIDLAIRRNCLIGGDDF----------KS--------G--------QTKMKSVLVDFLVGAGIKPTSIVSYNHLGNND  326 (494)
Q Consensus       273 pal~elae~~gvpi~GdD~----------KS--------G--------qT~lks~La~~l~~RGlkv~s~~s~NilGN~D  326 (494)
                      ..+.+.|+++|+.+.|.+-          +.        |        .| +-..+.+.+..||+.+..+++   +||.+
T Consensus       111 ~~l~~~a~~~g~~viGPnc~Gv~~~~~~~~~~~~~~~~~G~v~~vsqSG~-~~~~~~~~~~~~g~G~s~~vs---~G~~~  186 (457)
T 2csu_A          111 KELVEIAHKYGMRIIGPNCVGIMNTHVDLNATFITVAKKGNVAFISQSGA-LGAGIVYKTIKEDIGFSKFIS---VGNMA  186 (457)
T ss_dssp             HHHHHHHHHHTCEEECSSCCEEEEGGGTEEEESSCCCEECSEEEEESCHH-HHHHHHHHHHHTTCEESEEEE---CTTCC
T ss_pred             HHHHHHHHHcCCEEEcCCcceEEccCCCceeeecCCCCCCCEEEEeCCHH-HHHHHHHHHHhcCCCeeEEEE---CCCcC
Confidence            5678888999999999762          11        1        11 334677899999999999998   68876


Q ss_pred             ccCCCCcccchhhhhhhhhHHhhhhhcCCccCCCCCCCcceeeecccCCCCCce
Q 011047          327 GMNLSAPQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSK  380 (494)
Q Consensus       327 g~nL~~p~~~~SKeiSKs~vv~dil~~~~~ly~~g~~~~h~v~I~YvP~lGD~K  380 (494)
                      +.+.             ..+++-..          ++++..+..=|++.+||-.
T Consensus       187 ~~~~-------------~d~l~~~~----------~D~~t~~I~l~~E~i~~~~  217 (457)
T 2csu_A          187 DVDF-------------AELMEYLA----------DTEEDKAIALYIEGVRNGK  217 (457)
T ss_dssp             SSCH-------------HHHHHHHT----------TCSSCCEEEEEESCCSCHH
T ss_pred             CCCH-------------HHHHHHHh----------cCCCCCEEEEEEecCCCHH
Confidence            4322             22333332          2456666677888888743


No 54 
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=20.57  E-value=81  Score=27.36  Aligned_cols=82  Identities=9%  Similarity=-0.068  Sum_probs=42.7

Q ss_pred             cCCCeEEEEEccC--CcccccccCCccccHHHHHHhhhcCCCCCChhHHHHHH--HHhcCCCeecCCCCCCCchhHHHHH
Q 011047          204 NKVDRVVVLWTAN--TERYSNVIVGLNDTVENLLASLDKNEAEISPSTLYAIA--CVLENIPFINGSPQNTFVPGLIDLA  279 (494)
Q Consensus       204 ~~ld~vVVlw~As--TE~~~~~~~~~~~t~~~l~~al~~n~~~i~aS~~YA~A--Al~aG~~fINgtP~~t~ipal~ela  279 (494)
                      .|.+ |..+|...  .|..   -..++.|++++.+.++-----+++...-...  +++.|+..|=..|+ ++...+.++|
T Consensus        39 ~G~~-v~~vnp~~~g~~i~---G~~~~~sl~el~~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~~-~~~~~l~~~a  113 (145)
T 2duw_A           39 QGYH-VIPVSPKVAGKTLL---GQQGYATLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQLG-VINEQAAVLA  113 (145)
T ss_dssp             HTCC-EEEECSSSTTSEET---TEECCSSTTTCSSCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCTT-CCCHHHHHHH
T ss_pred             CCCE-EEEeCCcccccccC---CeeccCCHHHcCCCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC-hHHHHHHHHH
Confidence            4554 66666554  3321   1124445554433221101113444433332  55667665444454 5677888888


Q ss_pred             HHhCCccccCC
Q 011047          280 IRRNCLIGGDD  290 (494)
Q Consensus       280 e~~gvpi~GdD  290 (494)
                      +++|+.++|..
T Consensus       114 ~~~Gi~~igpn  124 (145)
T 2duw_A          114 REAGLSVVMDR  124 (145)
T ss_dssp             HTTTCEEECSC
T ss_pred             HHcCCEEEcCC
Confidence            88888888865


No 55 
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=20.17  E-value=48  Score=31.59  Aligned_cols=43  Identities=16%  Similarity=0.249  Sum_probs=37.2

Q ss_pred             hCCccccCCCCCCcchhHHHHHHHHHhcCCceeEEEeeeecCC
Q 011047          282 RNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGN  324 (494)
Q Consensus       282 ~gvpi~GdD~KSGqT~lks~La~~l~~RGlkv~s~~s~NilGN  324 (494)
                      +.++|.|-|--+|-|.+-..|+..|+.+|++|.-+=-.+.+.+
T Consensus        22 k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fKPv~~g~~   64 (242)
T 3qxc_A           22 HMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVN   64 (242)
T ss_dssp             EEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEECCEECSCC
T ss_pred             cEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEeeeecCCc
Confidence            5688999999999999999999999999999988765665544


No 56 
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=20.08  E-value=2.4e+02  Score=28.02  Aligned_cols=102  Identities=17%  Similarity=0.166  Sum_probs=69.3

Q ss_pred             HHHHHHhcCCCeEEEEEccCCcccccccCCccccHHHHHHhhhcC--CCCCChhHHHHHHHHhcC-CCeecCCCCCCCch
Q 011047          197 IREFKEKNKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKN--EAEISPSTLYAIACVLEN-IPFINGSPQNTFVP  273 (494)
Q Consensus       197 Ir~Fk~~~~ld~vVVlw~AsTE~~~~~~~~~~~t~~~l~~al~~n--~~~i~aS~~YA~AAl~aG-~~fINgtP~~t~ip  273 (494)
                      |++.-+...++-++|-          .+-|.|-+.+.+.++|.-.  -+-+.|-.+...+.   | -.|+=|||.     
T Consensus        83 I~~lN~D~~V~GIlvq----------lPLP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~---g~~~~~PcTp~-----  144 (288)
T 1b0a_A           83 IDTLNADNTIDGILVQ----------LPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQ---RAPRLRPCTPR-----  144 (288)
T ss_dssp             HHHHHTCTTCCEEEEC----------SSCCTTSCHHHHHTTSCTTTCTTCCSHHHHHHHHT---TCCSSCCHHHH-----
T ss_pred             HHHhcCCCCCcEEEEe----------CCCCCCCCHHHHHhccCCccCcccCCccchhHHhC---CCCCCCCCcHH-----
Confidence            4566666667776643          2224577888888888542  23367766655542   3 245555554     


Q ss_pred             hHHHHHHHhCCccccCCCCC-Ccc-hhHHHHHHHHHhcCCceeEE
Q 011047          274 GLIDLAIRRNCLIGGDDFKS-GQT-KMKSVLVDFLVGAGIKPTSI  316 (494)
Q Consensus       274 al~elae~~gvpi~GdD~KS-GqT-~lks~La~~l~~RGlkv~s~  316 (494)
                      +..++.++.++.+.|...-= |.. .+=+-+|.+|..+|-.|.-.
T Consensus       145 gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~  189 (288)
T 1b0a_A          145 GIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVT  189 (288)
T ss_dssp             HHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEE
T ss_pred             HHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEE
Confidence            89999999999888876433 777 46888999999999877665


Done!