Query 011049
Match_columns 494
No_of_seqs 432 out of 3604
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 07:32:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011049.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011049hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1506 DAP2 Dipeptidyl aminop 100.0 2.6E-45 5.7E-50 373.7 39.6 434 16-485 147-619 (620)
2 PRK10115 protease 2; Provision 100.0 6.1E-43 1.3E-47 357.9 39.6 438 19-489 154-682 (686)
3 KOG2281 Dipeptidyl aminopeptid 100.0 5.1E-35 1.1E-39 275.2 21.4 320 137-481 530-866 (867)
4 KOG2100 Dipeptidyl aminopeptid 100.0 9.9E-32 2.1E-36 275.7 31.9 392 46-484 345-749 (755)
5 PF00326 Peptidase_S9: Prolyl 100.0 3.5E-32 7.5E-37 242.9 14.5 196 288-485 5-212 (213)
6 COG1770 PtrB Protease II [Amin 100.0 8.2E-28 1.8E-32 230.2 38.3 285 178-484 372-680 (682)
7 KOG2237 Predicted serine prote 99.9 1.3E-24 2.9E-29 206.4 29.0 290 179-485 392-708 (712)
8 COG1505 Serine proteases of th 99.9 7.2E-26 1.6E-30 214.1 19.7 290 175-484 346-648 (648)
9 PLN02442 S-formylglutathione h 99.9 5.2E-22 1.1E-26 183.9 22.3 240 223-484 17-282 (283)
10 PRK10566 esterase; Provisional 99.9 7.4E-22 1.6E-26 181.0 23.0 220 235-483 10-249 (249)
11 TIGR02821 fghA_ester_D S-formy 99.9 1.1E-21 2.3E-26 181.6 22.6 239 223-483 12-275 (275)
12 PLN02298 hydrolase, alpha/beta 99.9 6.4E-21 1.4E-25 182.2 25.9 242 221-487 29-322 (330)
13 PRK13604 luxD acyl transferase 99.9 5.7E-21 1.2E-25 173.0 21.6 211 225-464 10-247 (307)
14 PF01738 DLH: Dienelactone hyd 99.9 6.3E-22 1.4E-26 177.2 14.7 201 237-483 1-218 (218)
15 PRK05077 frsA fermentation/res 99.9 8.5E-21 1.8E-25 184.3 23.0 230 221-483 165-413 (414)
16 COG0412 Dienelactone hydrolase 99.9 3.4E-20 7.4E-25 165.5 22.3 212 225-484 3-235 (236)
17 PF05448 AXE1: Acetyl xylan es 99.9 6.3E-21 1.4E-25 177.4 17.2 232 221-482 53-320 (320)
18 PLN02385 hydrolase; alpha/beta 99.9 5.6E-20 1.2E-24 176.8 23.6 235 224-484 61-347 (349)
19 KOG1455 Lysophospholipase [Lip 99.9 8.2E-20 1.8E-24 160.3 20.5 234 224-482 27-312 (313)
20 PRK10162 acetyl esterase; Prov 99.9 1.3E-19 2.7E-24 171.0 22.8 229 223-484 56-317 (318)
21 PHA02857 monoglyceride lipase; 99.8 2.4E-19 5.3E-24 167.0 23.0 224 229-483 5-274 (276)
22 PRK10749 lysophospholipase L2; 99.8 7.4E-19 1.6E-23 167.4 22.6 229 224-482 30-329 (330)
23 PRK05371 x-prolyl-dipeptidyl a 99.8 1.1E-17 2.5E-22 173.0 26.8 194 289-487 271-524 (767)
24 COG3458 Acetyl esterase (deace 99.8 4.6E-19 9.9E-24 151.9 13.2 231 220-482 52-317 (321)
25 PLN02652 hydrolase; alpha/beta 99.8 2.1E-17 4.6E-22 159.3 24.7 232 224-485 110-390 (395)
26 PRK11460 putative hydrolase; P 99.8 1.1E-17 2.4E-22 150.2 21.1 129 323-484 82-210 (232)
27 KOG4391 Predicted alpha/beta h 99.8 3.5E-18 7.6E-23 141.2 13.7 238 214-485 44-285 (300)
28 COG4099 Predicted peptidase [G 99.8 3.9E-18 8.5E-23 147.8 13.1 206 232-481 169-384 (387)
29 TIGR01840 esterase_phb esteras 99.8 1.2E-17 2.5E-22 148.6 16.1 189 239-446 1-197 (212)
30 COG1647 Esterase/lipase [Gener 99.8 8.3E-18 1.8E-22 140.3 13.8 198 256-480 16-242 (243)
31 KOG1552 Predicted alpha/beta h 99.8 3.1E-17 6.7E-22 141.4 16.8 221 223-485 34-255 (258)
32 COG0657 Aes Esterase/lipase [L 99.8 9.8E-17 2.1E-21 151.8 21.5 225 230-481 57-309 (312)
33 TIGR00976 /NonD putative hydro 99.8 5.4E-17 1.2E-21 164.8 20.1 231 230-487 2-308 (550)
34 COG2267 PldB Lysophospholipase 99.7 5.9E-16 1.3E-20 143.5 22.5 232 224-485 9-297 (298)
35 PRK04043 tolB translocation pr 99.7 3.6E-16 7.9E-21 152.0 20.3 151 17-212 212-367 (419)
36 PF06500 DUF1100: Alpha/beta h 99.7 1.8E-16 3.8E-21 148.3 15.6 226 221-483 162-410 (411)
37 PF02230 Abhydrolase_2: Phosph 99.7 1.4E-15 3.1E-20 135.5 19.7 132 322-483 84-216 (216)
38 PF12715 Abhydrolase_7: Abhydr 99.7 6.9E-17 1.5E-21 148.1 10.7 154 220-378 84-259 (390)
39 PF02129 Peptidase_S15: X-Pro 99.7 3.7E-16 8E-21 144.5 15.3 213 233-461 1-271 (272)
40 PF07859 Abhydrolase_3: alpha/ 99.7 1.2E-16 2.6E-21 142.5 11.4 181 258-463 1-210 (211)
41 TIGR03100 hydr1_PEP hydrolase, 99.7 2.2E-15 4.7E-20 139.5 19.7 229 225-480 3-273 (274)
42 KOG1515 Arylacetamide deacetyl 99.7 4.5E-15 9.8E-20 137.3 21.5 233 224-482 63-335 (336)
43 PF10503 Esterase_phd: Esteras 99.7 8.1E-16 1.8E-20 134.1 15.2 190 237-446 1-198 (220)
44 PLN02872 triacylglycerol lipas 99.7 1.7E-15 3.7E-20 145.4 18.4 246 220-486 40-393 (395)
45 TIGR01607 PST-A Plasmodium sub 99.7 4.6E-15 9.9E-20 140.9 21.2 236 229-480 2-331 (332)
46 PRK03629 tolB translocation pr 99.7 3.5E-15 7.7E-20 146.8 21.0 152 16-211 177-328 (429)
47 TIGR03611 RutD pyrimidine util 99.7 1.8E-15 3.9E-20 139.3 17.7 194 255-480 13-256 (257)
48 PRK04043 tolB translocation pr 99.7 3.3E-15 7.1E-20 145.3 19.6 150 17-211 168-318 (419)
49 COG0400 Predicted esterase [Ge 99.7 7.2E-15 1.6E-19 126.7 19.2 127 325-483 80-206 (207)
50 PRK01029 tolB translocation pr 99.7 5.7E-15 1.2E-19 144.7 20.5 154 16-212 163-325 (428)
51 PLN02511 hydrolase 99.7 3.5E-15 7.6E-20 144.6 18.7 237 223-485 70-368 (388)
52 PRK05137 tolB translocation pr 99.7 8.2E-15 1.8E-19 145.1 21.4 151 17-211 181-331 (435)
53 PRK04792 tolB translocation pr 99.7 9.8E-15 2.1E-19 144.2 21.3 151 17-211 197-347 (448)
54 PF12695 Abhydrolase_5: Alpha/ 99.7 3E-15 6.5E-20 124.9 14.0 145 257-461 1-145 (145)
55 TIGR03343 biphenyl_bphD 2-hydr 99.6 4.4E-15 9.6E-20 138.9 16.3 198 255-480 30-281 (282)
56 PRK10985 putative hydrolase; P 99.6 1.9E-14 4E-19 136.8 19.9 233 226-484 33-322 (324)
57 TIGR03056 bchO_mg_che_rel puta 99.6 1.7E-14 3.7E-19 134.5 18.5 212 229-480 10-278 (278)
58 COG0823 TolB Periplasmic compo 99.6 1.3E-14 2.8E-19 139.9 17.7 149 18-210 218-367 (425)
59 PRK02889 tolB translocation pr 99.6 3.8E-14 8.3E-19 139.6 21.2 151 17-211 175-325 (427)
60 PRK00870 haloalkane dehalogena 99.6 1.5E-14 3.2E-19 136.6 17.4 225 223-482 20-301 (302)
61 PLN00021 chlorophyllase 99.6 4.2E-14 9.2E-19 131.7 19.7 208 235-487 37-288 (313)
62 PRK10439 enterobactin/ferric e 99.6 8.6E-14 1.9E-18 134.4 22.3 207 223-463 179-393 (411)
63 PRK04792 tolB translocation pr 99.6 5.6E-14 1.2E-18 138.8 21.4 151 17-211 241-391 (448)
64 KOG4178 Soluble epoxide hydrol 99.6 1.9E-13 4.2E-18 122.6 22.6 200 255-483 44-321 (322)
65 PRK03629 tolB translocation pr 99.6 5.8E-14 1.3E-18 138.2 21.0 151 17-211 222-372 (429)
66 PRK10673 acyl-CoA esterase; Pr 99.6 5.1E-14 1.1E-18 129.6 19.0 195 255-481 16-254 (255)
67 PLN02824 hydrolase, alpha/beta 99.6 7.1E-14 1.5E-18 131.5 19.7 195 256-482 30-294 (294)
68 PRK00178 tolB translocation pr 99.6 8.2E-14 1.8E-18 138.2 20.9 149 19-211 180-328 (430)
69 TIGR02427 protocat_pcaD 3-oxoa 99.6 1.6E-14 3.4E-19 132.3 14.5 193 255-479 13-250 (251)
70 TIGR02240 PHA_depoly_arom poly 99.6 7.9E-14 1.7E-18 129.8 19.4 214 232-485 9-269 (276)
71 PRK04922 tolB translocation pr 99.6 9.4E-14 2E-18 137.3 21.0 151 17-211 183-333 (433)
72 PF08840 BAAT_C: BAAT / Acyl-C 99.6 1.5E-14 3.2E-19 127.6 13.1 155 328-484 6-212 (213)
73 PLN02965 Probable pheophorbida 99.6 9.7E-14 2.1E-18 127.5 19.0 195 257-481 5-252 (255)
74 PRK00178 tolB translocation pr 99.6 1.3E-13 2.9E-18 136.7 21.1 152 17-212 222-373 (430)
75 PRK02889 tolB translocation pr 99.6 1.7E-13 3.7E-18 135.0 20.9 151 17-211 219-369 (427)
76 PRK05137 tolB translocation pr 99.6 1.4E-13 3.1E-18 136.2 20.2 151 17-211 225-375 (435)
77 PLN03087 BODYGUARD 1 domain co 99.6 1.3E-13 2.8E-18 134.9 19.4 222 227-481 178-478 (481)
78 TIGR03695 menH_SHCHC 2-succiny 99.6 7.9E-14 1.7E-18 127.4 16.8 195 256-479 2-250 (251)
79 PLN02679 hydrolase, alpha/beta 99.6 1.7E-13 3.7E-18 132.1 19.1 199 255-481 88-356 (360)
80 PRK01029 tolB translocation pr 99.6 2.3E-13 5.1E-18 133.4 20.3 155 17-212 210-369 (428)
81 PRK03592 haloalkane dehalogena 99.6 5.3E-13 1.1E-17 125.6 21.5 212 232-484 14-291 (295)
82 PLN02894 hydrolase, alpha/beta 99.6 8.4E-13 1.8E-17 128.6 23.1 204 255-487 105-390 (402)
83 PRK04922 tolB translocation pr 99.6 4.3E-13 9.3E-18 132.7 20.9 151 17-211 227-377 (433)
84 COG0823 TolB Periplasmic compo 99.6 3.3E-13 7.1E-18 130.3 19.4 155 16-213 171-325 (425)
85 TIGR01249 pro_imino_pep_1 prol 99.6 9.4E-14 2E-18 131.1 15.4 213 228-483 8-306 (306)
86 TIGR01836 PHA_synth_III_C poly 99.5 4.8E-13 1.1E-17 128.6 20.2 185 288-482 85-350 (350)
87 COG2945 Predicted hydrolase of 99.5 1.8E-13 3.8E-18 112.1 14.4 201 225-480 5-205 (210)
88 TIGR01250 pro_imino_pep_2 prol 99.5 1.6E-13 3.4E-18 128.5 16.3 195 255-480 25-288 (288)
89 KOG3101 Esterase D [General fu 99.5 4.9E-14 1.1E-18 116.3 10.7 214 234-464 25-264 (283)
90 PRK06489 hypothetical protein; 99.5 4.9E-13 1.1E-17 129.2 19.2 173 295-483 103-358 (360)
91 PRK01742 tolB translocation pr 99.5 2.4E-13 5.2E-18 134.2 17.3 149 17-209 183-331 (429)
92 COG3509 LpqC Poly(3-hydroxybut 99.5 7.2E-13 1.6E-17 116.4 18.1 231 227-484 38-309 (312)
93 TIGR03101 hydr2_PEP hydrolase, 99.5 2.5E-12 5.4E-17 116.5 22.2 208 226-458 2-243 (266)
94 TIGR01738 bioH putative pimelo 99.5 2.4E-13 5.1E-18 124.0 15.3 189 256-479 5-245 (245)
95 PRK14875 acetoin dehydrogenase 99.5 4.1E-13 8.9E-18 130.9 17.5 192 255-481 131-370 (371)
96 KOG3043 Predicted hydrolase re 99.5 9.2E-14 2E-18 116.6 10.7 166 288-484 58-242 (242)
97 PRK11071 esterase YqiA; Provis 99.5 1.2E-12 2.6E-17 113.6 17.2 177 256-480 2-189 (190)
98 COG2936 Predicted acyl esteras 99.5 6.6E-13 1.4E-17 128.8 17.0 217 222-461 17-291 (563)
99 COG0429 Predicted hydrolase of 99.5 1.6E-12 3.5E-17 116.4 17.5 232 226-484 51-342 (345)
100 PRK10349 carboxylesterase BioH 99.5 6.6E-13 1.4E-17 122.2 15.6 190 256-480 14-254 (256)
101 PRK03204 haloalkane dehalogena 99.5 4.1E-12 8.8E-17 118.6 20.7 196 255-479 34-285 (286)
102 PRK00175 metX homoserine O-ace 99.5 3.3E-12 7.3E-17 123.9 20.2 70 410-482 304-374 (379)
103 PLN02578 hydrolase 99.5 2.5E-12 5.4E-17 123.8 19.2 169 295-480 110-353 (354)
104 PF12697 Abhydrolase_6: Alpha/ 99.5 9.3E-14 2E-18 124.9 8.1 175 258-463 1-218 (228)
105 PRK01742 tolB translocation pr 99.5 4.5E-12 9.8E-17 125.2 20.5 142 18-210 228-369 (429)
106 PF00756 Esterase: Putative es 99.5 3.9E-14 8.4E-19 129.9 5.4 215 234-479 5-251 (251)
107 PRK07581 hypothetical protein; 99.5 8.3E-13 1.8E-17 126.8 14.6 68 410-484 270-338 (339)
108 PRK08775 homoserine O-acetyltr 99.5 9.6E-13 2.1E-17 126.3 14.9 175 293-482 95-339 (343)
109 TIGR01392 homoserO_Ac_trn homo 99.5 2.2E-12 4.8E-17 124.2 17.1 68 410-480 283-351 (351)
110 PLN03084 alpha/beta hydrolase 99.5 1.1E-11 2.5E-16 118.9 21.0 193 255-480 127-382 (383)
111 TIGR02800 propeller_TolB tol-p 99.4 1.8E-11 3.8E-16 121.3 21.1 151 17-211 169-319 (417)
112 KOG1838 Alpha/beta hydrolase [ 99.4 1.7E-11 3.7E-16 114.2 18.1 241 222-483 91-389 (409)
113 PRK11126 2-succinyl-6-hydroxy- 99.4 8.4E-12 1.8E-16 113.8 16.0 188 255-481 2-241 (242)
114 KOG1454 Predicted hydrolase/ac 99.4 2.5E-11 5.5E-16 113.9 18.2 200 255-483 58-325 (326)
115 PLN02211 methyl indole-3-aceta 99.4 3.7E-11 8E-16 111.1 18.9 193 255-478 18-266 (273)
116 PF12740 Chlorophyllase2: Chlo 99.3 8.9E-11 1.9E-15 103.8 17.7 206 238-487 5-255 (259)
117 COG2382 Fes Enterochelin ester 99.3 3E-11 6.4E-16 107.3 14.0 222 224-484 69-297 (299)
118 TIGR02800 propeller_TolB tol-p 99.3 1.4E-10 3E-15 114.9 20.4 150 18-211 214-363 (417)
119 KOG4409 Predicted hydrolase/ac 99.3 1.6E-10 3.5E-15 104.3 18.3 177 292-481 112-363 (365)
120 PF03583 LIP: Secretory lipase 99.3 1.6E-10 3.5E-15 106.9 19.0 191 289-488 18-287 (290)
121 COG0627 Predicted esterase [Ge 99.3 6.4E-11 1.4E-15 109.2 15.8 147 335-485 141-314 (316)
122 KOG4627 Kynurenine formamidase 99.3 3.1E-11 6.8E-16 99.6 11.4 202 222-461 43-247 (270)
123 KOG4667 Predicted esterase [Li 99.3 5.3E-11 1.2E-15 99.1 12.8 210 223-466 9-244 (269)
124 PF03403 PAF-AH_p_II: Platelet 99.3 8.1E-11 1.8E-15 112.6 15.0 188 253-485 98-361 (379)
125 PRK06765 homoserine O-acetyltr 99.3 9.2E-11 2E-15 112.9 15.1 69 410-481 318-387 (389)
126 PRK05855 short chain dehydroge 99.3 8.7E-11 1.9E-15 121.8 15.7 214 230-483 8-293 (582)
127 PLN02980 2-oxoglutarate decarb 99.2 6.3E-10 1.4E-14 125.6 20.9 202 255-485 1371-1642(1655)
128 KOG2112 Lysophospholipase [Lip 99.2 1.3E-09 2.8E-14 91.5 17.1 129 325-481 75-203 (206)
129 KOG2624 Triglyceride lipase-ch 99.2 6.9E-10 1.5E-14 105.3 16.8 241 220-483 44-399 (403)
130 PRK07868 acyl-CoA synthetase; 99.2 2.4E-09 5.1E-14 116.8 22.3 233 236-490 48-369 (994)
131 cd00312 Esterase_lipase Estera 99.2 8.9E-11 1.9E-15 118.7 10.5 129 236-380 78-214 (493)
132 PF08538 DUF1749: Protein of u 99.2 2.5E-10 5.5E-15 102.8 12.0 208 255-480 33-303 (303)
133 COG4946 Uncharacterized protei 99.2 1E-09 2.2E-14 101.5 15.7 194 17-246 58-296 (668)
134 KOG2984 Predicted hydrolase [G 99.2 7.3E-11 1.6E-15 97.2 7.2 172 297-481 71-275 (277)
135 COG2819 Predicted hydrolase of 99.2 5.6E-09 1.2E-13 91.8 19.2 126 334-480 127-259 (264)
136 COG4188 Predicted dienelactone 99.2 4.8E-10 1E-14 102.8 12.6 217 224-462 38-295 (365)
137 KOG3847 Phospholipase A2 (plat 99.1 1.9E-09 4E-14 95.2 13.4 191 252-487 115-376 (399)
138 TIGR01838 PHA_synth_I poly(R)- 99.1 1.2E-08 2.7E-13 101.2 19.9 88 288-380 211-303 (532)
139 PF09752 DUF2048: Uncharacteri 99.0 1.2E-08 2.5E-13 93.6 16.6 219 236-480 76-347 (348)
140 PF00561 Abhydrolase_1: alpha/ 99.0 2.2E-10 4.7E-15 103.4 5.2 155 298-463 1-217 (230)
141 PF14583 Pectate_lyase22: Olig 99.0 1.7E-08 3.7E-13 93.9 17.3 76 29-113 19-99 (386)
142 COG2272 PnbA Carboxylesterase 99.0 1.1E-09 2.5E-14 103.7 8.1 127 237-380 80-218 (491)
143 PF00930 DPPIV_N: Dipeptidyl p 99.0 8.9E-09 1.9E-13 99.0 13.6 180 12-209 17-225 (353)
144 PF02273 Acyl_transf_2: Acyl t 99.0 1.3E-07 2.7E-12 81.1 18.3 207 229-463 7-239 (294)
145 KOG2382 Predicted alpha/beta h 98.9 1.6E-08 3.4E-13 91.4 13.4 203 254-483 51-314 (315)
146 COG3571 Predicted hydrolase of 98.9 1.1E-07 2.4E-12 75.7 16.2 168 255-463 14-183 (213)
147 PF05728 UPF0227: Uncharacteri 98.9 7.7E-08 1.7E-12 82.3 15.4 133 330-479 47-186 (187)
148 PF10340 DUF2424: Protein of u 98.9 1.6E-07 3.6E-12 87.7 18.0 201 237-461 106-349 (374)
149 PF00135 COesterase: Carboxyle 98.9 3E-09 6.6E-14 109.1 7.4 130 236-378 108-244 (535)
150 PF07224 Chlorophyllase: Chlor 98.7 4.1E-08 8.9E-13 85.0 8.5 182 236-461 32-230 (307)
151 COG4757 Predicted alpha/beta h 98.7 3.2E-07 6.9E-12 78.0 12.5 225 227-479 8-280 (281)
152 TIGR01839 PHA_synth_II poly(R) 98.7 8.2E-07 1.8E-11 87.4 16.7 87 288-380 238-329 (560)
153 PF03959 FSH1: Serine hydrolas 98.6 1.9E-07 4.1E-12 82.7 9.9 102 332-463 94-203 (212)
154 PF06342 DUF1057: Alpha/beta h 98.6 6.9E-06 1.5E-10 72.8 19.3 128 225-378 7-136 (297)
155 COG1073 Hydrolases of the alph 98.6 2.8E-07 6.1E-12 86.7 11.4 79 401-483 217-298 (299)
156 COG3208 GrsT Predicted thioest 98.6 7.1E-07 1.5E-11 77.3 12.5 148 325-479 53-233 (244)
157 cd00707 Pancreat_lipase_like P 98.6 2.7E-07 5.8E-12 85.1 10.3 109 255-379 36-147 (275)
158 PRK13616 lipoprotein LpqB; Pro 98.6 6.5E-07 1.4E-11 90.7 13.3 82 16-113 377-466 (591)
159 COG2021 MET2 Homoserine acetyl 98.6 2.2E-06 4.7E-11 79.0 15.0 65 411-480 302-366 (368)
160 PF06057 VirJ: Bacterial virul 98.5 2.3E-06 4.9E-11 71.8 12.5 172 282-480 14-190 (192)
161 TIGR03230 lipo_lipase lipoprot 98.5 1.5E-06 3.2E-11 84.1 12.0 109 255-378 41-153 (442)
162 KOG2564 Predicted acetyltransf 98.5 1.2E-06 2.6E-11 76.7 10.1 115 223-365 49-167 (343)
163 PF06821 Ser_hydrolase: Serine 98.5 1.5E-06 3.2E-11 73.6 10.4 100 344-463 55-155 (171)
164 PF00930 DPPIV_N: Dipeptidyl p 98.5 1.1E-06 2.3E-11 84.7 10.7 138 17-194 209-353 (353)
165 PF07676 PD40: WD40-like Beta 98.5 2.1E-07 4.5E-12 57.4 3.7 36 34-70 2-39 (39)
166 KOG2551 Phospholipase/carboxyh 98.4 2.7E-06 5.8E-11 72.3 11.2 124 328-485 92-223 (230)
167 COG4947 Uncharacterized protei 98.4 6.1E-07 1.3E-11 72.2 6.1 119 329-462 88-216 (227)
168 COG0596 MhpC Predicted hydrola 98.4 1.2E-05 2.6E-10 73.6 15.3 72 298-378 51-122 (282)
169 KOG1553 Predicted alpha/beta h 98.4 8.7E-07 1.9E-11 79.6 6.8 180 224-430 214-398 (517)
170 PF11144 DUF2920: Protein of u 98.4 1.9E-05 4E-10 74.3 15.5 163 319-485 157-370 (403)
171 COG4946 Uncharacterized protei 98.3 8.7E-06 1.9E-10 76.1 11.6 131 19-193 383-513 (668)
172 PRK04940 hypothetical protein; 98.3 3.8E-05 8.3E-10 64.4 14.3 116 344-480 60-178 (180)
173 TIGR01849 PHB_depoly_PhaZ poly 98.3 3.9E-05 8.5E-10 73.5 16.2 70 411-482 333-406 (406)
174 PF14583 Pectate_lyase22: Olig 98.3 2E-05 4.3E-10 73.8 13.4 163 18-202 216-383 (386)
175 PF11339 DUF3141: Protein of u 98.3 7.1E-05 1.5E-09 71.9 17.0 50 410-461 292-348 (581)
176 PF10230 DUF2305: Uncharacteri 98.2 7.9E-05 1.7E-09 68.3 16.1 108 255-380 2-123 (266)
177 PF10142 PhoPQ_related: PhoPQ- 98.2 1.3E-05 2.7E-10 75.6 10.3 145 334-488 162-326 (367)
178 PF02897 Peptidase_S9_N: Proly 98.1 4.8E-05 1E-09 75.3 14.1 92 19-117 151-249 (414)
179 TIGR03502 lipase_Pla1_cef extr 98.1 2.1E-05 4.6E-10 81.1 11.6 93 255-365 449-576 (792)
180 PF08662 eIF2A: Eukaryotic tra 98.1 0.0001 2.2E-09 64.1 13.2 125 18-189 39-164 (194)
181 PRK13616 lipoprotein LpqB; Pro 98.1 0.00013 2.8E-09 74.3 15.5 130 42-211 351-487 (591)
182 KOG1516 Carboxylesterase and r 98.0 8E-06 1.7E-10 83.8 6.7 131 236-379 96-232 (545)
183 PF06028 DUF915: Alpha/beta hy 98.0 0.00018 4E-09 64.8 13.0 151 321-479 82-252 (255)
184 PF12146 Hydrolase_4: Putative 97.9 2.8E-05 6.1E-10 56.3 6.2 75 234-332 1-78 (79)
185 PF12048 DUF3530: Protein of u 97.9 0.0012 2.5E-08 61.9 18.5 205 234-482 70-309 (310)
186 COG3243 PhaC Poly(3-hydroxyalk 97.9 0.00042 9.1E-09 65.2 14.2 87 289-380 131-218 (445)
187 PF05705 DUF829: Eukaryotic pr 97.9 0.00039 8.4E-09 63.0 13.8 65 413-479 176-240 (240)
188 KOG3253 Predicted alpha/beta h 97.8 0.00082 1.8E-08 65.6 15.1 116 325-463 229-347 (784)
189 PF07819 PGAP1: PGAP1-like pro 97.7 0.00026 5.7E-09 63.0 10.3 54 325-378 63-122 (225)
190 COG3545 Predicted esterase of 97.7 0.00063 1.4E-08 56.0 11.2 118 343-480 58-177 (181)
191 PF05677 DUF818: Chlamydia CHL 97.7 0.00075 1.6E-08 61.8 12.8 119 223-365 111-236 (365)
192 COG4814 Uncharacterized protei 97.7 0.0011 2.4E-08 57.7 12.8 149 323-481 117-286 (288)
193 KOG4840 Predicted hydrolases o 97.6 0.0024 5.2E-08 54.4 13.8 87 289-382 58-147 (299)
194 TIGR02171 Fb_sc_TIGR02171 Fibr 97.6 0.00015 3.2E-09 74.7 8.0 87 18-115 329-420 (912)
195 PF02897 Peptidase_S9_N: Proly 97.6 0.0011 2.5E-08 65.5 14.3 138 45-210 128-273 (414)
196 PF05577 Peptidase_S28: Serine 97.5 0.00054 1.2E-08 68.1 10.5 61 321-381 89-150 (434)
197 PF03096 Ndr: Ndr family; Int 97.5 0.0042 9.1E-08 56.2 14.6 220 229-480 4-277 (283)
198 PF08662 eIF2A: Eukaryotic tra 97.5 0.01 2.2E-07 51.7 16.8 150 43-245 8-166 (194)
199 TIGR03866 PQQ_ABC_repeats PQQ- 97.5 0.015 3.2E-07 54.4 19.4 141 16-206 51-191 (300)
200 COG2706 3-carboxymuconate cycl 97.4 0.008 1.7E-07 55.1 15.4 159 18-210 167-331 (346)
201 PRK10115 protease 2; Provision 97.4 0.0037 8.1E-08 65.5 14.9 123 43-201 129-254 (686)
202 PLN02733 phosphatidylcholine-s 97.4 0.00068 1.5E-08 66.3 8.7 87 288-380 112-202 (440)
203 COG3150 Predicted esterase [Ge 97.4 0.0067 1.4E-07 49.4 12.6 120 345-480 60-187 (191)
204 PTZ00472 serine carboxypeptida 97.4 0.0024 5.3E-08 63.4 12.6 142 234-380 60-217 (462)
205 TIGR03866 PQQ_ABC_repeats PQQ- 97.3 0.0094 2E-07 55.7 15.8 141 15-205 8-148 (300)
206 KOG2931 Differentiation-relate 97.3 0.024 5.3E-07 50.8 16.5 225 224-480 22-304 (326)
207 PF07433 DUF1513: Protein of u 97.2 0.12 2.7E-06 47.4 20.4 178 40-263 4-197 (305)
208 PF07082 DUF1350: Protein of u 97.2 0.024 5.1E-07 50.1 14.8 154 288-461 38-204 (250)
209 PF00151 Lipase: Lipase; Inte 97.1 0.00045 9.8E-09 65.1 3.8 111 255-379 71-187 (331)
210 KOG4389 Acetylcholinesterase/B 97.1 0.00097 2.1E-08 63.6 5.8 125 237-380 121-256 (601)
211 PF01674 Lipase_2: Lipase (cla 97.1 0.0022 4.8E-08 56.4 7.6 71 288-365 20-96 (219)
212 KOG1446 Histone H3 (Lys4) meth 97.1 0.0058 1.3E-07 54.8 10.0 109 18-156 162-273 (311)
213 KOG2139 WD40 repeat protein [G 97.0 0.01 2.2E-07 54.4 11.3 96 4-115 203-301 (445)
214 TIGR02658 TTQ_MADH_Hv methylam 97.0 0.024 5.2E-07 53.7 14.4 89 18-112 27-122 (352)
215 KOG0293 WD40 repeat-containing 97.0 0.0077 1.7E-07 56.0 10.3 126 35-206 219-346 (519)
216 PF00450 Peptidase_S10: Serine 96.9 0.0062 1.4E-07 60.3 10.3 148 228-380 17-182 (415)
217 PF00975 Thioesterase: Thioest 96.9 0.0059 1.3E-07 54.8 9.1 78 292-377 22-102 (229)
218 KOG2315 Predicted translation 96.8 0.022 4.8E-07 55.1 12.2 128 14-189 245-375 (566)
219 KOG3967 Uncharacterized conser 96.7 0.015 3.2E-07 49.4 9.2 111 255-367 101-213 (297)
220 PF08386 Abhydrolase_4: TAP-li 96.6 0.0049 1.1E-07 47.3 5.7 60 415-481 34-93 (103)
221 PF07519 Tannase: Tannase and 96.6 0.028 6E-07 56.1 12.3 131 231-380 9-151 (474)
222 KOG1446 Histone H3 (Lys4) meth 96.5 0.44 9.5E-06 43.2 17.7 171 16-233 120-294 (311)
223 KOG2182 Hydrolytic enzymes of 96.5 0.042 9.2E-07 53.1 12.1 134 229-379 63-207 (514)
224 PF07676 PD40: WD40-like Beta 96.5 0.0031 6.6E-08 38.5 3.1 28 81-115 2-29 (39)
225 KOG0293 WD40 repeat-containing 96.5 0.036 7.8E-07 51.7 11.1 118 43-207 272-389 (519)
226 COG3386 Gluconolactonase [Carb 96.5 0.2 4.4E-06 46.8 16.1 52 16-74 141-193 (307)
227 KOG2183 Prolylcarboxypeptidase 96.4 0.0037 8.1E-08 58.5 4.5 56 321-376 144-199 (492)
228 PF10282 Lactonase: Lactonase, 96.4 0.078 1.7E-06 50.9 13.7 131 45-210 196-332 (345)
229 KOG2055 WD40 repeat protein [G 96.3 0.026 5.6E-07 53.4 8.8 117 5-158 266-387 (514)
230 PF02239 Cytochrom_D1: Cytochr 96.2 0.15 3.3E-06 49.2 14.3 100 16-151 14-114 (369)
231 PF08450 SGL: SMP-30/Gluconola 96.2 0.25 5.4E-06 44.8 15.0 86 14-113 56-152 (246)
232 COG4782 Uncharacterized protei 96.0 0.046 1E-06 50.8 9.0 58 321-380 170-235 (377)
233 KOG2139 WD40 repeat protein [G 96.0 0.075 1.6E-06 48.9 10.1 99 2-112 146-256 (445)
234 TIGR02658 TTQ_MADH_Hv methylam 95.9 0.096 2.1E-06 49.7 11.2 107 14-151 211-336 (352)
235 KOG0271 Notchless-like WD40 re 95.9 0.027 5.8E-07 52.0 7.0 78 19-112 347-427 (480)
236 PF10647 Gmad1: Lipoprotein Lp 95.9 1.3 2.9E-05 40.3 18.2 86 16-115 46-132 (253)
237 TIGR02171 Fb_sc_TIGR02171 Fibr 95.9 0.11 2.4E-06 54.3 12.1 49 53-113 319-368 (912)
238 PF10647 Gmad1: Lipoprotein Lp 95.7 0.32 7E-06 44.3 13.5 59 41-111 24-82 (253)
239 PTZ00420 coronin; Provisional 95.7 0.41 8.9E-06 48.8 15.2 146 15-203 94-249 (568)
240 KOG3975 Uncharacterized conser 95.7 0.23 4.9E-06 43.7 11.3 48 415-467 242-289 (301)
241 KOG2394 WD40 protein DMR-N9 [G 95.6 0.011 2.3E-07 57.0 3.5 99 2-112 225-350 (636)
242 PTZ00421 coronin; Provisional 95.6 0.57 1.2E-05 47.2 15.7 144 15-203 95-246 (493)
243 PF05990 DUF900: Alpha/beta hy 95.5 0.06 1.3E-06 48.3 7.9 83 324-428 75-166 (233)
244 PRK11028 6-phosphogluconolacto 95.5 1 2.2E-05 42.9 17.0 65 45-112 179-245 (330)
245 KOG2565 Predicted hydrolases o 95.5 0.088 1.9E-06 48.9 8.8 118 233-374 132-259 (469)
246 COG3319 Thioesterase domains o 95.5 0.036 7.8E-07 50.0 6.4 53 320-377 46-101 (257)
247 COG1506 DAP2 Dipeptidyl aminop 95.5 0.36 7.9E-06 50.3 14.4 81 14-113 39-119 (620)
248 PF05057 DUF676: Putative seri 95.4 0.019 4E-07 51.0 4.1 22 343-364 77-98 (217)
249 PF11187 DUF2974: Protein of u 95.3 0.03 6.5E-07 49.7 5.0 49 330-378 70-122 (224)
250 PRK11028 6-phosphogluconolacto 95.2 1.9 4.1E-05 41.0 17.6 85 16-113 10-98 (330)
251 PF06433 Me-amine-dh_H: Methyl 95.1 0.47 1E-05 44.3 12.4 116 18-158 17-139 (342)
252 PF04083 Abhydro_lipase: Parti 95.1 0.091 2E-06 35.8 5.8 45 220-264 8-52 (63)
253 PF04762 IKI3: IKI3 family; I 95.1 1.4 3E-05 48.0 17.7 43 14-59 93-139 (928)
254 KOG0973 Histone transcription 95.0 0.32 6.9E-06 51.2 12.1 29 42-72 71-99 (942)
255 KOG2048 WD40 repeat protein [G 95.0 1.1 2.5E-05 44.9 15.0 135 37-210 379-513 (691)
256 PLN02209 serine carboxypeptida 95.0 0.3 6.5E-06 48.2 11.3 61 416-480 352-433 (437)
257 COG3946 VirJ Type IV secretory 94.9 0.19 4.1E-06 47.4 9.2 171 282-479 272-446 (456)
258 cd00741 Lipase Lipase. Lipase 94.9 0.098 2.1E-06 43.5 6.9 51 325-377 11-65 (153)
259 PRK10252 entF enterobactin syn 94.9 0.13 2.8E-06 59.2 10.0 75 295-377 1092-1169(1296)
260 COG3490 Uncharacterized protei 94.9 2.9 6.3E-05 37.8 18.3 186 30-262 57-259 (366)
261 KOG4497 Uncharacterized conser 94.8 0.23 5E-06 45.2 9.2 16 99-114 96-111 (447)
262 KOG0279 G protein beta subunit 94.8 1 2.2E-05 40.3 12.9 170 19-206 39-226 (315)
263 PTZ00420 coronin; Provisional 94.8 1.9 4E-05 44.2 16.8 55 15-76 145-199 (568)
264 KOG1551 Uncharacterized conser 94.8 0.13 2.8E-06 45.5 7.3 68 408-482 294-366 (371)
265 KOG0266 WD40 repeat-containing 94.8 1.2 2.5E-05 44.7 15.4 123 36-206 199-322 (456)
266 KOG1407 WD40 repeat protein [F 94.8 1.3 2.8E-05 39.2 13.2 39 18-59 87-125 (313)
267 PF07433 DUF1513: Protein of u 94.7 2.4 5.3E-05 39.1 15.6 121 17-154 27-155 (305)
268 PF01764 Lipase_3: Lipase (cla 94.7 0.083 1.8E-06 43.1 5.8 39 324-364 46-84 (140)
269 PF03283 PAE: Pectinacetyleste 94.6 0.053 1.1E-06 51.9 5.1 36 327-362 139-174 (361)
270 PF02239 Cytochrom_D1: Cytochr 94.6 0.57 1.2E-05 45.3 12.1 109 53-207 5-113 (369)
271 KOG0291 WD40-repeat-containing 94.5 0.2 4.3E-06 50.7 8.7 81 19-114 459-540 (893)
272 cd00200 WD40 WD40 domain, foun 94.5 2 4.3E-05 38.9 15.4 141 14-205 69-210 (289)
273 PF02450 LCAT: Lecithin:choles 94.4 0.079 1.7E-06 51.6 6.0 85 288-379 69-160 (389)
274 KOG0296 Angio-associated migra 94.4 1.6 3.4E-05 40.6 13.5 138 18-205 86-223 (399)
275 KOG0318 WD40 repeat stress pro 94.4 0.49 1.1E-05 45.9 10.7 59 45-113 195-254 (603)
276 KOG0271 Notchless-like WD40 re 94.3 0.042 9.1E-07 50.8 3.4 72 45-149 120-191 (480)
277 PF08450 SGL: SMP-30/Gluconola 94.3 0.4 8.7E-06 43.5 9.9 142 18-203 22-165 (246)
278 KOG4388 Hormone-sensitive lipa 94.2 0.039 8.4E-07 54.1 3.2 67 416-486 788-858 (880)
279 PLN03016 sinapoylglucose-malat 94.2 0.3 6.6E-06 48.1 9.5 62 415-480 347-429 (433)
280 KOG1445 Tumor-specific antigen 94.0 0.26 5.6E-06 48.9 8.3 88 14-114 696-784 (1012)
281 TIGR03712 acc_sec_asp2 accesso 94.0 4.7 0.0001 39.6 16.4 114 339-461 353-486 (511)
282 PF10282 Lactonase: Lactonase, 93.9 3.1 6.8E-05 39.9 15.8 64 45-113 91-162 (345)
283 PF11288 DUF3089: Protein of u 93.9 0.19 4E-06 43.6 6.4 67 298-365 46-116 (207)
284 cd00200 WD40 WD40 domain, foun 93.8 2.9 6.2E-05 37.9 15.1 138 17-205 114-252 (289)
285 PF07519 Tannase: Tannase and 93.6 0.11 2.5E-06 51.7 5.3 68 415-484 353-429 (474)
286 PTZ00421 coronin; Provisional 93.5 4.9 0.00011 40.5 16.8 55 15-76 145-200 (493)
287 KOG0288 WD40 repeat protein Ti 93.5 0.58 1.2E-05 44.0 9.2 100 29-157 330-429 (459)
288 COG1075 LipA Predicted acetylt 93.5 0.17 3.6E-06 48.3 6.0 36 343-378 126-163 (336)
289 PF06259 Abhydrolase_8: Alpha/ 93.4 0.73 1.6E-05 39.1 9.0 56 318-374 84-139 (177)
290 KOG1274 WD40 repeat protein [G 93.4 0.24 5.3E-06 51.1 7.2 89 13-114 155-252 (933)
291 KOG2055 WD40 repeat protein [G 93.3 1.1 2.3E-05 43.0 10.6 117 43-204 260-376 (514)
292 COG3386 Gluconolactonase [Carb 93.3 3.2 6.9E-05 38.9 14.0 50 138-202 144-193 (307)
293 KOG2394 WD40 protein DMR-N9 [G 93.2 0.23 5E-06 48.2 6.4 53 101-185 297-349 (636)
294 COG1770 PtrB Protease II [Amin 93.2 9.7 0.00021 38.9 17.7 62 44-115 132-194 (682)
295 COG2706 3-carboxymuconate cycl 93.1 0.84 1.8E-05 42.3 9.5 85 44-153 247-331 (346)
296 PF06433 Me-amine-dh_H: Methyl 93.0 1.4 3.1E-05 41.2 11.0 165 14-208 153-326 (342)
297 KOG1282 Serine carboxypeptidas 92.9 0.92 2E-05 44.6 10.1 149 227-380 49-214 (454)
298 KOG2110 Uncharacterized conser 92.9 0.34 7.4E-06 44.9 6.6 84 17-113 152-237 (391)
299 KOG0318 WD40 repeat stress pro 92.7 5.3 0.00012 39.2 14.4 86 14-114 35-123 (603)
300 KOG2521 Uncharacterized conser 92.6 3.8 8.3E-05 38.8 13.4 69 415-485 225-293 (350)
301 PLN02454 triacylglycerol lipas 92.5 0.3 6.4E-06 47.1 6.1 42 323-364 207-248 (414)
302 KOG0772 Uncharacterized conser 92.5 3.5 7.5E-05 40.3 12.9 59 47-111 275-334 (641)
303 COG4287 PqaA PhoPQ-activated p 92.5 0.1 2.2E-06 48.4 2.8 133 325-463 214-372 (507)
304 KOG4497 Uncharacterized conser 92.5 0.6 1.3E-05 42.7 7.5 83 15-114 68-153 (447)
305 KOG0266 WD40 repeat-containing 92.5 2.4 5.1E-05 42.5 12.8 142 15-204 222-366 (456)
306 KOG2106 Uncharacterized conser 92.4 0.41 8.9E-06 46.2 6.7 86 15-113 425-510 (626)
307 COG5354 Uncharacterized protei 92.1 2.8 6E-05 40.9 11.7 80 18-113 255-334 (561)
308 KOG2096 WD40 repeat protein [G 92.1 1.7 3.6E-05 39.7 9.7 67 39-114 85-152 (420)
309 cd00519 Lipase_3 Lipase (class 92.0 0.49 1.1E-05 42.4 6.7 40 323-364 109-148 (229)
310 PLN02919 haloacid dehalogenase 91.9 13 0.00028 41.6 18.5 29 45-76 744-772 (1057)
311 KOG0279 G protein beta subunit 91.8 9.5 0.00021 34.4 15.1 45 12-59 79-124 (315)
312 KOG1283 Serine carboxypeptidas 91.4 3.8 8.3E-05 37.7 11.3 141 232-378 11-165 (414)
313 PRK02888 nitrous-oxide reducta 91.2 2.3 5E-05 43.3 10.8 136 14-203 211-352 (635)
314 PLN02408 phospholipase A1 91.2 0.44 9.6E-06 45.2 5.6 40 325-364 181-220 (365)
315 KOG1273 WD40 repeat protein [G 91.0 5.4 0.00012 36.5 11.8 56 15-76 42-97 (405)
316 KOG3724 Negative regulator of 90.6 0.53 1.1E-05 48.4 5.8 52 321-373 152-210 (973)
317 PLN02571 triacylglycerol lipas 90.5 0.61 1.3E-05 45.0 5.9 40 325-364 207-246 (413)
318 KOG0643 Translation initiation 90.0 9.9 0.00021 34.1 12.3 98 21-148 77-180 (327)
319 PLN02324 triacylglycerol lipas 90.0 0.72 1.6E-05 44.5 5.9 40 325-364 196-235 (415)
320 KOG0315 G-protein beta subunit 89.9 5.9 0.00013 35.1 10.7 88 16-113 144-234 (311)
321 PLN02606 palmitoyl-protein thi 89.3 3.5 7.6E-05 38.1 9.5 35 344-378 95-131 (306)
322 KOG2110 Uncharacterized conser 89.3 5.7 0.00012 37.2 10.7 86 15-113 103-192 (391)
323 PF06850 PHB_depo_C: PHB de-po 89.0 0.81 1.8E-05 38.9 4.8 66 415-482 134-202 (202)
324 PLN02802 triacylglycerol lipas 88.9 0.82 1.8E-05 45.1 5.5 39 326-364 312-350 (509)
325 KOG0291 WD40-repeat-containing 87.9 4.6 9.9E-05 41.4 9.9 64 36-112 10-73 (893)
326 COG2939 Carboxypeptidase C (ca 87.4 2.9 6.3E-05 41.2 8.1 106 255-363 101-217 (498)
327 PLN02633 palmitoyl protein thi 87.1 6.3 0.00014 36.5 9.7 35 344-378 94-130 (314)
328 PLN00413 triacylglycerol lipas 86.8 1.3 2.8E-05 43.4 5.4 35 327-363 269-303 (479)
329 COG3391 Uncharacterized conser 86.6 33 0.00071 33.4 15.8 128 42-207 117-244 (381)
330 PLN02753 triacylglycerol lipas 86.6 1.4 3E-05 43.8 5.5 39 325-363 290-331 (531)
331 PLN02310 triacylglycerol lipas 86.5 1.3 2.7E-05 42.8 5.1 21 344-364 209-229 (405)
332 PLN02761 lipase class 3 family 86.2 1.5 3.2E-05 43.5 5.5 39 325-363 271-313 (527)
333 KOG1274 WD40 repeat protein [G 86.2 11 0.00024 39.7 11.8 92 30-131 128-221 (933)
334 PLN03037 lipase class 3 family 86.1 1.2 2.6E-05 44.1 4.9 20 344-363 318-337 (525)
335 smart00824 PKS_TE Thioesterase 86.1 6.4 0.00014 34.1 9.4 34 343-376 63-99 (212)
336 KOG1539 WD repeat protein [Gen 86.0 1.4 3E-05 45.4 5.4 80 19-114 557-637 (910)
337 KOG1445 Tumor-specific antigen 85.9 6.2 0.00013 39.7 9.5 67 36-113 673-739 (1012)
338 KOG1520 Predicted alkaloid syn 85.6 8 0.00017 36.7 9.7 129 46-199 120-249 (376)
339 PLN02162 triacylglycerol lipas 85.4 1.7 3.8E-05 42.4 5.5 36 326-363 262-297 (475)
340 PLN02934 triacylglycerol lipas 85.2 1.7 3.7E-05 42.9 5.5 36 326-363 305-340 (515)
341 KOG0645 WD40 repeat protein [G 85.2 6.7 0.00015 35.2 8.5 62 43-114 64-125 (312)
342 KOG0263 Transcription initiati 84.7 24 0.00052 36.5 13.2 44 29-74 440-483 (707)
343 KOG0275 Conserved WD40 repeat- 84.3 4.4 9.5E-05 37.0 7.1 81 18-113 285-367 (508)
344 PLN02919 haloacid dehalogenase 84.2 26 0.00056 39.3 14.6 81 45-153 687-778 (1057)
345 KOG2369 Lecithin:cholesterol a 84.0 4.5 9.8E-05 39.5 7.5 45 321-367 161-205 (473)
346 KOG0272 U4/U6 small nuclear ri 83.4 11 0.00023 36.0 9.5 54 14-72 237-291 (459)
347 KOG2919 Guanine nucleotide-bin 83.4 6 0.00013 36.4 7.6 33 42-76 51-83 (406)
348 PLN02719 triacylglycerol lipas 83.2 2.4 5.3E-05 42.0 5.5 39 325-363 276-317 (518)
349 KOG0973 Histone transcription 83.0 3.5 7.6E-05 43.8 6.9 92 13-113 146-238 (942)
350 KOG2096 WD40 repeat protein [G 82.8 15 0.00033 33.8 9.8 87 18-113 209-297 (420)
351 PF01083 Cutinase: Cutinase; 82.7 2.9 6.3E-05 35.7 5.3 54 322-377 61-120 (179)
352 KOG0263 Transcription initiati 82.6 4 8.6E-05 41.8 6.8 109 31-185 525-636 (707)
353 KOG4499 Ca2+-binding protein R 82.6 14 0.00031 32.5 9.2 104 18-149 139-245 (310)
354 PLN02517 phosphatidylcholine-s 82.5 3.8 8.3E-05 41.4 6.7 70 288-364 160-233 (642)
355 KOG2314 Translation initiation 81.9 13 0.00028 37.0 9.6 65 41-113 446-511 (698)
356 PF04762 IKI3: IKI3 family; I 80.9 28 0.0006 38.4 13.1 77 44-130 213-291 (928)
357 KOG1539 WD repeat protein [Gen 79.9 7.5 0.00016 40.4 7.7 65 100-200 582-646 (910)
358 PF05787 DUF839: Bacterial pro 79.9 30 0.00065 35.3 12.1 42 139-190 482-523 (524)
359 PF02089 Palm_thioest: Palmito 79.2 12 0.00025 34.4 8.1 35 344-378 80-115 (279)
360 KOG0305 Anaphase promoting com 79.0 7 0.00015 38.8 7.1 83 18-113 368-450 (484)
361 KOG0303 Actin-binding protein 78.7 63 0.0014 30.9 15.4 78 15-107 151-229 (472)
362 KOG2100 Dipeptidyl aminopeptid 78.6 8 0.00017 41.4 8.0 49 9-60 118-167 (755)
363 KOG4569 Predicted lipase [Lipi 78.2 4.1 8.8E-05 38.9 5.2 36 327-364 156-191 (336)
364 KOG1920 IkappaB kinase complex 77.6 39 0.00085 37.2 12.3 43 14-59 86-128 (1265)
365 KOG0265 U5 snRNP-specific prot 77.3 60 0.0013 29.9 14.5 87 36-154 43-129 (338)
366 COG3673 Uncharacterized conser 77.1 42 0.00091 31.2 10.7 45 319-364 98-142 (423)
367 KOG0273 Beta-transducin family 76.8 8.9 0.00019 37.1 6.8 83 15-113 429-512 (524)
368 KOG1407 WD40 repeat protein [F 76.8 57 0.0012 29.4 12.1 117 41-203 21-137 (313)
369 PRK02888 nitrous-oxide reducta 76.8 57 0.0012 33.7 12.8 52 18-75 296-352 (635)
370 KOG1273 WD40 repeat protein [G 76.6 38 0.00082 31.3 10.3 55 45-113 28-84 (405)
371 COG3490 Uncharacterized protei 76.5 23 0.00049 32.3 8.8 76 31-113 102-180 (366)
372 KOG1009 Chromatin assembly com 75.9 27 0.00059 33.3 9.5 60 42-113 125-184 (434)
373 KOG0286 G-protein beta subunit 74.6 40 0.00087 30.8 9.8 124 17-185 165-290 (343)
374 KOG2111 Uncharacterized conser 74.4 27 0.00059 32.2 8.9 89 16-114 157-246 (346)
375 TIGR02604 Piru_Ver_Nterm putat 73.2 93 0.002 30.1 14.7 96 43-152 74-179 (367)
376 KOG0771 Prolactin regulatory e 72.1 77 0.0017 30.4 11.5 44 41-90 187-230 (398)
377 PF03088 Str_synth: Strictosid 71.8 8.4 0.00018 28.4 4.3 55 15-75 34-88 (89)
378 KOG0264 Nucleosome remodeling 71.6 1E+02 0.0022 29.9 15.3 60 14-75 143-211 (422)
379 KOG2541 Palmitoyl protein thio 71.3 38 0.00082 30.7 8.9 35 343-377 91-126 (296)
380 KOG0282 mRNA splicing factor [ 71.3 17 0.00038 35.3 7.3 85 15-113 234-318 (503)
381 COG3204 Uncharacterized protei 71.1 82 0.0018 29.1 11.1 33 41-76 86-118 (316)
382 KOG4378 Nuclear protein COP1 [ 70.9 27 0.00059 34.3 8.4 85 14-113 183-269 (673)
383 KOG0647 mRNA export protein (c 70.6 24 0.00051 32.4 7.6 83 42-157 29-114 (347)
384 KOG4388 Hormone-sensitive lipa 70.3 18 0.0004 36.3 7.4 88 255-363 396-488 (880)
385 PLN02847 triacylglycerol lipas 69.7 12 0.00025 38.1 6.0 21 344-364 251-271 (633)
386 PF10605 3HBOH: 3HB-oligomer h 69.6 1.4E+02 0.003 30.7 14.4 72 413-486 552-637 (690)
387 PF13360 PQQ_2: PQQ-like domai 68.1 86 0.0019 27.7 12.1 140 18-207 3-145 (238)
388 KOG2315 Predicted translation 68.0 19 0.00041 35.8 6.9 58 45-113 316-373 (566)
389 PF08237 PE-PPE: PE-PPE domain 67.9 25 0.00054 31.3 7.3 24 342-365 46-69 (225)
390 PF06977 SdiA-regulated: SdiA- 67.2 49 0.0011 30.0 9.1 39 35-76 16-54 (248)
391 KOG0296 Angio-associated migra 67.2 46 0.001 31.4 8.8 98 15-150 125-225 (399)
392 KOG2106 Uncharacterized conser 67.0 1.1E+02 0.0024 30.4 11.6 81 65-184 427-507 (626)
393 PF15525 DUF4652: Domain of un 66.3 27 0.00058 29.6 6.6 71 11-86 81-158 (200)
394 PLN02213 sinapoylglucose-malat 65.6 23 0.0005 33.5 7.1 61 416-480 234-315 (319)
395 KOG2314 Translation initiation 65.5 25 0.00055 35.0 7.2 64 42-114 494-557 (698)
396 KOG0256 1-aminocyclopropane-1- 64.1 1.5E+02 0.0032 28.9 12.2 39 329-367 131-170 (471)
397 KOG0319 WD40-repeat-containing 63.3 33 0.00071 35.5 7.7 78 46-155 25-102 (775)
398 PF12566 DUF3748: Protein of u 62.2 6.2 0.00013 30.1 2.0 14 47-60 74-87 (122)
399 KOG0288 WD40 repeat protein Ti 62.2 19 0.00042 34.3 5.6 82 18-112 363-449 (459)
400 KOG4649 PQQ (pyrrolo-quinoline 62.1 1.2E+02 0.0027 27.4 12.6 63 7-76 62-125 (354)
401 PF10605 3HBOH: 3HB-oligomer h 61.1 20 0.00044 36.3 5.8 14 328-341 404-417 (690)
402 PF08484 Methyltransf_14: C-me 60.9 32 0.00069 28.7 6.3 50 325-378 54-103 (160)
403 KOG0289 mRNA splicing factor [ 60.9 1.6E+02 0.0034 28.8 11.2 36 174-213 438-473 (506)
404 PF09994 DUF2235: Uncharacteri 60.7 17 0.00037 33.6 5.1 41 323-364 72-112 (277)
405 PF10584 Proteasome_A_N: Prote 59.9 4.2 9E-05 21.3 0.5 8 47-54 7-14 (23)
406 KOG0283 WD40 repeat-containing 59.9 70 0.0015 33.5 9.5 39 18-59 432-470 (712)
407 PF15492 Nbas_N: Neuroblastoma 59.5 1.4E+02 0.0031 27.3 15.7 61 46-114 3-63 (282)
408 KOG1920 IkappaB kinase complex 59.2 3E+02 0.0065 30.9 16.7 76 45-130 200-276 (1265)
409 KOG1538 Uncharacterized conser 59.1 15 0.00033 37.3 4.6 30 42-76 14-43 (1081)
410 PF05576 Peptidase_S37: PS-10 58.6 29 0.00062 33.6 6.1 56 321-379 114-169 (448)
411 KOG1063 RNA polymerase II elon 58.2 18 0.00039 37.0 5.0 49 19-71 553-601 (764)
412 PF12242 Eno-Rase_NADH_b: NAD( 58.0 42 0.00092 23.8 5.4 42 323-364 18-60 (78)
413 KOG0265 U5 snRNP-specific prot 57.4 1.3E+02 0.0027 27.9 9.6 58 14-76 65-122 (338)
414 PF03088 Str_synth: Strictosid 57.0 25 0.00054 25.9 4.4 41 65-114 36-76 (89)
415 KOG0315 G-protein beta subunit 56.9 1.5E+02 0.0032 26.7 12.7 84 15-112 17-101 (311)
416 KOG2048 WD40 repeat protein [G 56.6 86 0.0019 32.2 9.2 161 45-266 433-594 (691)
417 PF04301 DUF452: Protein of un 56.1 12 0.00026 32.8 3.1 33 344-378 57-89 (213)
418 PLN02213 sinapoylglucose-malat 55.6 32 0.00069 32.6 6.2 55 326-380 32-97 (319)
419 KOG0772 Uncharacterized conser 55.0 61 0.0013 32.2 7.7 89 14-112 335-427 (641)
420 KOG4540 Putative lipase essent 54.9 20 0.00043 32.5 4.3 22 344-365 276-297 (425)
421 COG5153 CVT17 Putative lipase 54.9 20 0.00043 32.5 4.3 22 344-365 276-297 (425)
422 KOG0305 Anaphase promoting com 54.4 2.4E+02 0.0053 28.4 12.0 122 36-199 297-418 (484)
423 KOG1524 WD40 repeat-containing 54.3 2.5E+02 0.0053 28.4 13.5 62 38-114 102-165 (737)
424 PF05694 SBP56: 56kDa selenium 53.5 47 0.001 32.5 6.8 69 42-114 313-393 (461)
425 smart00135 LY Low-density lipo 53.4 32 0.00069 20.5 4.0 30 44-76 12-41 (43)
426 PF12146 Hydrolase_4: Putative 51.9 65 0.0014 23.1 5.9 58 415-479 16-78 (79)
427 PTZ00472 serine carboxypeptida 51.8 32 0.0007 34.5 5.8 63 415-480 364-457 (462)
428 COG3391 Uncharacterized conser 51.7 2.4E+02 0.0052 27.5 15.5 147 17-206 139-287 (381)
429 PF09910 DUF2139: Uncharacteri 51.3 79 0.0017 29.2 7.4 70 137-213 78-150 (339)
430 KOG4532 WD40-like repeat conta 51.1 2E+02 0.0042 26.3 13.9 59 44-111 162-220 (344)
431 PLN03016 sinapoylglucose-malat 50.7 47 0.001 33.0 6.6 56 325-380 145-211 (433)
432 PLN02209 serine carboxypeptida 50.1 50 0.0011 32.8 6.7 150 226-380 43-213 (437)
433 KOG0282 mRNA splicing factor [ 49.1 72 0.0016 31.3 7.2 59 12-76 274-332 (503)
434 PLN00181 protein SPA1-RELATED; 48.6 3.9E+02 0.0085 29.1 17.4 30 43-76 535-565 (793)
435 COG5354 Uncharacterized protei 47.4 3.1E+02 0.0067 27.5 11.6 65 40-113 222-293 (561)
436 PLN02376 1-aminocyclopropane-1 46.9 3.3E+02 0.0071 27.7 13.5 37 341-379 117-153 (496)
437 KOG0310 Conserved WD40 repeat- 46.8 1.4E+02 0.0031 29.3 8.8 56 14-76 172-227 (487)
438 KOG1009 Chromatin assembly com 46.1 1.6E+02 0.0034 28.5 8.7 35 36-72 61-95 (434)
439 PRK13613 lipoprotein LpqB; Pro 45.5 3.8E+02 0.0083 28.0 14.7 62 42-114 410-474 (599)
440 PF08553 VID27: VID27 cytoplas 44.0 3.6E+02 0.0077 29.2 12.0 54 17-76 503-562 (794)
441 TIGR03032 conserved hypothetic 44.0 1.8E+02 0.0039 27.3 8.6 107 22-150 189-295 (335)
442 PF05787 DUF839: Bacterial pro 43.5 1.1E+02 0.0023 31.4 8.0 12 102-113 509-520 (524)
443 KOG0284 Polyadenylation factor 42.3 3.3E+02 0.0072 26.4 11.1 18 99-116 101-118 (464)
444 KOG0277 Peroxisomal targeting 42.3 2.6E+02 0.0057 25.3 12.3 64 44-115 12-81 (311)
445 PF15492 Nbas_N: Neuroblastoma 42.2 30 0.00065 31.4 3.4 28 45-76 48-75 (282)
446 PF06500 DUF1100: Alpha/beta h 42.0 25 0.00053 34.3 3.1 64 415-481 189-254 (411)
447 COG4553 DepA Poly-beta-hydroxy 40.8 38 0.00081 31.1 3.8 68 415-484 339-409 (415)
448 KOG0273 Beta-transducin family 40.4 1E+02 0.0022 30.3 6.7 99 7-115 246-348 (524)
449 KOG2029 Uncharacterized conser 40.0 42 0.00092 34.1 4.3 36 329-364 511-546 (697)
450 cd07224 Pat_like Patatin-like 39.4 42 0.00091 30.1 4.0 35 330-365 16-50 (233)
451 KOG0272 U4/U6 small nuclear ri 39.1 70 0.0015 30.9 5.4 30 41-72 346-375 (459)
452 KOG1063 RNA polymerase II elon 38.9 1.3E+02 0.0028 31.2 7.4 65 41-113 526-591 (764)
453 PRK13614 lipoprotein LpqB; Pro 38.8 4.7E+02 0.01 27.2 15.7 76 30-114 373-453 (573)
454 KOG3617 WD40 and TPR repeat-co 38.5 3.1E+02 0.0067 29.6 10.1 34 29-63 48-81 (1416)
455 KOG4547 WD40 repeat-containing 35.7 4.9E+02 0.011 26.5 11.9 103 14-154 76-181 (541)
456 KOG1034 Transcriptional repres 35.1 1.4E+02 0.0029 28.1 6.4 90 13-113 110-200 (385)
457 KOG0278 Serine/threonine kinas 35.1 3.4E+02 0.0074 24.5 10.8 152 2-203 149-300 (334)
458 KOG0306 WD40-repeat-containing 34.9 1.4E+02 0.0031 31.3 7.1 72 38-113 452-527 (888)
459 KOG0316 Conserved WD40 repeat- 34.7 3.1E+02 0.0067 24.6 8.2 63 19-88 82-145 (307)
460 PLN02607 1-aminocyclopropane-1 34.3 4.9E+02 0.011 26.0 11.6 38 340-379 117-154 (447)
461 PRK13615 lipoprotein LpqB; Pro 33.9 4.4E+02 0.0096 27.2 10.6 124 2-133 367-507 (557)
462 TIGR03100 hydr1_PEP hydrolase, 33.6 2.7E+02 0.0059 25.5 8.6 45 415-462 26-70 (274)
463 PF00400 WD40: WD domain, G-be 33.6 58 0.0013 18.8 2.8 24 36-59 7-30 (39)
464 KOG0277 Peroxisomal targeting 33.6 3.7E+02 0.008 24.4 12.3 56 11-70 31-89 (311)
465 KOG1034 Transcriptional repres 33.1 80 0.0017 29.5 4.6 54 16-73 327-382 (385)
466 PLN00181 protein SPA1-RELATED; 32.7 4.5E+02 0.0097 28.7 11.3 89 15-113 637-727 (793)
467 PF00450 Peptidase_S10: Serine 32.5 42 0.0009 33.0 3.2 62 415-479 330-413 (415)
468 PF12894 Apc4_WD40: Anaphase-p 32.4 92 0.002 19.7 3.6 29 43-75 14-42 (47)
469 PRK13614 lipoprotein LpqB; Pro 31.9 1.6E+02 0.0035 30.4 7.2 67 43-112 436-503 (573)
470 KOG2281 Dipeptidyl aminopeptid 31.8 2.1E+02 0.0046 29.7 7.6 36 44-86 203-239 (867)
471 PF13360 PQQ_2: PQQ-like domai 31.4 3.6E+02 0.0077 23.6 14.7 54 15-76 43-96 (238)
472 KOG4378 Nuclear protein COP1 [ 31.3 1.2E+02 0.0026 30.1 5.7 65 12-84 225-290 (673)
473 KOG1963 WD40 repeat protein [G 31.1 1.3E+02 0.0028 31.9 6.3 81 18-113 227-311 (792)
474 KOG0268 Sof1-like rRNA process 31.0 1E+02 0.0022 29.2 5.0 83 17-113 209-291 (433)
475 KOG0974 WD-repeat protein WDR6 31.0 66 0.0014 34.7 4.3 53 17-73 154-206 (967)
476 COG1647 Esterase/lipase [Gener 30.9 1.4E+02 0.003 26.4 5.5 60 415-479 15-76 (243)
477 KOG1282 Serine carboxypeptidas 30.9 1.2E+02 0.0025 30.4 5.8 62 416-480 364-446 (454)
478 PF10081 Abhydrolase_9: Alpha/ 30.8 2.1E+02 0.0045 26.5 6.8 45 333-377 98-145 (289)
479 KOG0268 Sof1-like rRNA process 30.2 65 0.0014 30.5 3.6 92 9-113 241-334 (433)
480 KOG0639 Transducin-like enhanc 30.2 1.2E+02 0.0026 30.1 5.5 81 15-110 484-567 (705)
481 PRK13613 lipoprotein LpqB; Pro 30.2 5.7E+02 0.012 26.8 10.8 64 42-111 456-522 (599)
482 TIGR02276 beta_rpt_yvtn 40-res 29.4 92 0.002 18.4 3.3 24 50-76 1-24 (42)
483 KOG4640 Anaphase-promoting com 28.7 96 0.0021 31.7 4.7 29 44-76 66-94 (665)
484 PRK05579 bifunctional phosphop 28.1 3.4E+02 0.0073 26.7 8.5 59 289-351 138-196 (399)
485 KOG1523 Actin-related protein 27.7 3.7E+02 0.0079 25.3 7.8 62 43-113 13-74 (361)
486 cd07230 Pat_TGL4-5_like Triacy 27.5 64 0.0014 31.9 3.4 36 330-368 90-125 (421)
487 KOG1524 WD40 repeat-containing 27.5 94 0.002 31.1 4.4 64 4-75 112-175 (737)
488 cd07198 Patatin Patatin-like p 27.5 87 0.0019 26.3 3.9 35 329-366 14-48 (172)
489 PRK13690 hypothetical protein; 27.3 1.3E+02 0.0028 25.4 4.5 32 322-353 4-35 (184)
490 COG5169 HSF1 Heat shock transc 27.3 41 0.00089 30.9 1.9 23 36-58 20-42 (282)
491 PF01731 Arylesterase: Arylest 26.6 2.2E+02 0.0049 20.8 5.3 39 31-72 44-82 (86)
492 PF15525 DUF4652: Domain of un 26.5 4.2E+02 0.0091 22.8 8.1 72 65-155 87-158 (200)
493 KOG1916 Nuclear protein, conta 26.5 60 0.0013 34.7 3.1 47 48-103 243-290 (1283)
494 KOG0264 Nucleosome remodeling 26.4 2.9E+02 0.0063 26.9 7.3 61 14-76 291-351 (422)
495 TIGR00128 fabD malonyl CoA-acy 26.0 1E+02 0.0022 28.4 4.5 34 330-365 71-104 (290)
496 KOG0286 G-protein beta subunit 25.8 5.4E+02 0.012 23.9 11.2 80 19-112 210-290 (343)
497 KOG0640 mRNA cleavage stimulat 25.0 5.5E+02 0.012 24.1 8.4 18 139-156 329-346 (430)
498 KOG0290 Conserved WD40 repeat- 24.8 5.7E+02 0.012 23.8 10.7 74 5-82 62-139 (364)
499 TIGR03300 assembly_YfgL outer 24.7 6.3E+02 0.014 24.3 17.7 54 138-207 290-343 (377)
500 cd07218 Pat_iPLA2 Calcium-inde 24.5 1.1E+02 0.0024 27.7 4.1 32 331-363 18-49 (245)
No 1
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-45 Score=373.71 Aligned_cols=434 Identities=23% Similarity=0.256 Sum_probs=305.5
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeec---cceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT---SQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~---~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
.+.++|+++. ++ ....+...+.....+.|.+|++.++....... .-...++.....+ ....++......
T Consensus 147 ~~~~l~~~d~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-- 218 (620)
T COG1506 147 ERSDLYVVDI---ES-KLIKLGLGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNG--ELESLTPGEGSI-- 218 (620)
T ss_pred cccceEEEcc---Cc-ccccccCCCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCC--ceEEEcCCCcee--
Confidence 5668999988 54 55566666666677778888887777664321 1122222222333 666666655443
Q ss_pred CCCCCCceeeCCCCCEEEEEEeccCc---cce-EEEEc-cCCCCCC-----C------------CCCceEeeecC-CCce
Q 011049 93 SDPGSPMMTRTSTGTNVIAKIKKEND---EQI-YILLN-GRGFTPE-----G------------NIPFLDLFDIN-TGSK 149 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~~~~~~---~~~-~~~~~-~~g~~~~-----~------------~~~~l~~~d~~-~g~~ 149 (494)
..+. +.+||+.+++....... ... .+.+. ..+.... + ....++.+-.. .|..
T Consensus 219 ---~~~~--~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 293 (620)
T COG1506 219 ---SKLA--FDADGKSIALLGTESDRGLAEGDFILLLDGELGEVDGDLSSGDDTRGAWAVEGGLDGDGLLFIATDGGGSS 293 (620)
T ss_pred ---eeee--eCCCCCeeEEeccCCccCccccceEEEEeccccccceeeccCCcccCcHHhccccCCCcEEEEEecCCCce
Confidence 3334 79999988887754331 111 11111 1111000 0 00001111111 1111
Q ss_pred EEEEeeCcchhhhheeeeccC-CCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCC-CCCcccccccEEE
Q 011049 150 ERIWESNREKYFETAVALVFG-QGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPH-PYPTLASLQKEMI 227 (494)
Q Consensus 150 ~~l~~~~~~~~~~~~~~~~s~-~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~-~~~~~~~~~~~~~ 227 (494)
..+...... ......... ..-..|+.+++.+++..+++..|+++|+++. ++..+++..+. ........++|.+
T Consensus 294 ~l~~~~~~~---~~~~~~~~~~~~v~~f~~~~~~~~~~~s~~~~p~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~e~~ 368 (620)
T COG1506 294 PLFRVDDLG---GGVEGLSGDDGGVPGFDVDGRKLALAYSSPTEPPEIYLYDR--GEEAKLTSSNNSGLKKVKLAEPEPV 368 (620)
T ss_pred EEEEEeccC---CceeeecCCCceEEEEeeCCCEEEEEecCCCCccceEEEcC--CCceEEeecccccccccccCCceEE
Confidence 111111000 000000011 1224666788999999999999999999986 34444554433 3445566789999
Q ss_pred EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 228 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 228 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
++++.||.++++++++|+++++.++ +|+||++||||... .. + ......+.|+++||+|+.+|+||
T Consensus 369 ~~~~~dG~~i~~~l~~P~~~~~~k~--yP~i~~~hGGP~~~------~~-----~--~~~~~~q~~~~~G~~V~~~n~RG 433 (620)
T COG1506 369 TYKSNDGETIHGWLYKPPGFDPRKK--YPLIVYIHGGPSAQ------VG-----Y--SFNPEIQVLASAGYAVLAPNYRG 433 (620)
T ss_pred EEEcCCCCEEEEEEecCCCCCCCCC--CCEEEEeCCCCccc------cc-----c--ccchhhHHHhcCCeEEEEeCCCC
Confidence 9999999999999999999988776 99999999998432 11 1 12356779999999999999999
Q ss_pred CCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC
Q 011049 308 IIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 308 ~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~ 384 (494)
+.|+|.++.. ..++....+|+.++++++.+.+.+|++||+|+|+||||||+++++++.| +|+|+++..+.+++...
T Consensus 434 S~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~ 512 (620)
T COG1506 434 STGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLY 512 (620)
T ss_pred CCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhh
Confidence 9999988654 3445567999999999999999999999999999999999999999996 89999999988775443
Q ss_pred CCCcccc--------cccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 011049 385 PFGFQTE--------FRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP 456 (494)
Q Consensus 385 ~~~~~~~--------~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~ 456 (494)
....... ...+|.+.+.|.+.||+.+++++++|+|+|||++|.+|| .+|+++|+++|+.+|+++++++||
T Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~--~~q~~~~~~aL~~~g~~~~~~~~p 590 (620)
T COG1506 513 FGESTEGLRFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVP--IEQAEQLVDALKRKGKPVELVVFP 590 (620)
T ss_pred ccccchhhcCCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCC--hHHHHHHHHHHHHcCceEEEEEeC
Confidence 3222111 112222678899999999999999999999999999998 999999999999999999999999
Q ss_pred CCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 457 FEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 457 ~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+++|++..+++....+.++++||++|++.
T Consensus 591 ~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 591 DEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred CCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 99999998888999999999999999875
No 2
>PRK10115 protease 2; Provisional
Probab=100.00 E-value=6.1e-43 Score=357.85 Aligned_cols=438 Identities=17% Similarity=0.157 Sum_probs=299.3
Q ss_pred eeeeccCCCCCCCC--CeeccccccccccceecCCCceEEEEeeee--ccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 19 IIYTQPAEPAEGEK--PEILHKLDLRFRSVSWCDDSLALVNETWYK--TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 19 ~i~~~~~~~~~~~~--~~~lt~~~~~~~~p~wspDg~~i~f~~~~~--~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
+|+++++ ++|. +..+.... ....|++||+.|+|++... .+..++|++++.++..+.+.|+.+.....+
T Consensus 154 ~l~v~d~---~tg~~l~~~i~~~~---~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~-- 225 (686)
T PRK10115 154 GIRFRNL---ETGNWYPELLDNVE---PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFY-- 225 (686)
T ss_pred EEEEEEC---CCCCCCCccccCcc---eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEE--
Confidence 6888888 6676 44444432 4589999999999998742 246899999999874466777775433211
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccc-------------------------------eEEEEccCCCCCCCCCCceEeee
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQ-------------------------------IYILLNGRGFTPEGNIPFLDLFD 143 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~-------------------------------~~~~~~~~g~~~~~~~~~l~~~d 143 (494)
.....+.||+++++.+....... ..+++..+.. ..+..|..++
T Consensus 226 ---~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~tn~~---~~~~~l~~~~ 299 (686)
T PRK10115 226 ---VSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLDHYQHRFYLRSNRH---GKNFGLYRTR 299 (686)
T ss_pred ---EEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEEeCCCEEEEEEcCC---CCCceEEEec
Confidence 01112448877765443221100 1122211111 1122355555
Q ss_pred cC-CCceEEEEee-Ccc-----hhhhh------------eeeeccCC-------------Cc--cccc--ccCcEEEEEE
Q 011049 144 IN-TGSKERIWES-NRE-----KYFET------------AVALVFGQ-------------GE--EDIN--LNQLKILTSK 187 (494)
Q Consensus 144 ~~-~g~~~~l~~~-~~~-----~~~~~------------~~~~~s~~-------------~~--~~~s--~d~~~~~~~~ 187 (494)
+. .++.+.+... +.. ..+.. .+.++... .. ..++ +++..+++..
T Consensus 300 ~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (686)
T PRK10115 300 VRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWIAYNPEPETSRLRYGY 379 (686)
T ss_pred CCCcccCeEEECCCCCCEEEEEEEECCEEEEEEEeCCEEEEEEEcCCCCceEEecCCCCceEeeecccCCCCCceEEEEE
Confidence 55 3333333322 110 00000 00011100 00 1123 4567899999
Q ss_pred ecCCCCCeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcC
Q 011049 188 ESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYK 267 (494)
Q Consensus 188 ~s~~~p~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~ 267 (494)
+++..|+++|.++.++++.+.|+..+.+......+.+|.+++++.||.+|+++++++++... .++.|+||++|||+..
T Consensus 380 ss~~~P~~~y~~d~~~~~~~~l~~~~~~~~~~~~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~--~~~~P~ll~~hGg~~~ 457 (686)
T PRK10115 380 SSMTTPDTLFELDMDTGERRVLKQTEVPGFDAANYRSEHLWITARDGVEVPVSLVYHRKHFR--KGHNPLLVYGYGSYGA 457 (686)
T ss_pred ecCCCCCEEEEEECCCCcEEEEEecCCCCcCccccEEEEEEEECCCCCEEEEEEEEECCCCC--CCCCCEEEEEECCCCC
Confidence 99999999999999888878887665432223356899999999999999997777554322 2347999999998743
Q ss_pred CcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCch---hHHHHHHHHHHHHHHHHHcCCCCCC
Q 011049 268 SKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR---FVEQLVSSAEAAVEEVVRRGVADPS 344 (494)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~---~~~~~~~d~~~~v~~l~~~~~~d~~ 344 (494)
+..+ .| ....+.|+++||+|+.++.||+.|+|..+.... +....++|+++++++|++++++|++
T Consensus 458 ~~~p---------~f----~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~ 524 (686)
T PRK10115 458 SIDA---------DF----SFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPS 524 (686)
T ss_pred CCCC---------Cc----cHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChH
Confidence 3211 12 235568999999999999999999998754421 1225689999999999999999999
Q ss_pred cEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC------C--CCccccccccccc--HHHHHhcCccccccCC
Q 011049 345 RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT------P--FGFQTEFRTLWEA--TNVYIEMSPITHANKI 414 (494)
Q Consensus 345 ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~------~--~~~~~~~~~~~~~--~~~~~~~sp~~~~~~~ 414 (494)
|++|+|.|+||+++.++++++|++|+|+|+..|++|.... + +....+.+.+++. .+.+.+.||+.+++++
T Consensus 525 rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~ 604 (686)
T PRK10115 525 LCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQ 604 (686)
T ss_pred HeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCcc
Confidence 9999999999999999999999999999999999985321 1 1122344566532 3445679999999999
Q ss_pred CCC-EEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEc---CCCCCccCCcccHH---HHHHHHHHHHHHhcCCCC
Q 011049 415 KKP-ILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLL---PFEHHVYAARENVM---HVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 415 ~~P-~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~---~~~~H~~~~~~~~~---~~~~~~~~fl~~~l~~~~ 487 (494)
+.| +|++||++|++|| +.|+.+++++|++++++++++++ +++||+.. .++. ........|+...+....
T Consensus 605 ~~P~lLi~~g~~D~RV~--~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~--~~r~~~~~~~A~~~aFl~~~~~~~~ 680 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQ--YWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK--SGRFKSYEGVAMEYAFLIALAQGTL 680 (686)
T ss_pred CCCceeEEecCCCCCcC--chHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC--cCHHHHHHHHHHHHHHHHHHhCCcC
Confidence 999 6778999999998 99999999999999999888888 99999843 3333 344556899999888765
Q ss_pred CC
Q 011049 488 SD 489 (494)
Q Consensus 488 ~~ 489 (494)
..
T Consensus 681 ~~ 682 (686)
T PRK10115 681 PA 682 (686)
T ss_pred CC
Confidence 44
No 3
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.1e-35 Score=275.23 Aligned_cols=320 Identities=19% Similarity=0.244 Sum_probs=247.9
Q ss_pred CceEeeecC-CCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEee----c
Q 011049 137 PFLDLFDIN-TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT----N 211 (494)
Q Consensus 137 ~~l~~~d~~-~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt----~ 211 (494)
.+||++..+ .|+..+++...=. ....++.+-+.++..+++...|+++..+.+.+.+...+. .
T Consensus 530 ~hLyvvsye~~g~~~rlt~~g~s-------------h~~~l~~~~d~fv~~~~sv~sP~cv~~y~ls~~~~~~l~~q~~~ 596 (867)
T KOG2281|consen 530 HHLYVVSYENPGEIARLTEPGYS-------------HSCELDQQCDHFVSYYSSVGSPPCVSLYSLSWPENDPLPKQVSF 596 (867)
T ss_pred eeEEEEEEecCCceeeccCCCcc-------------cchhhhhhhhhHhhhhhcCCCCceEEEEeccCCccCcccchhhH
Confidence 368998887 7888887764311 112345555556666777788888766665443322221 0
Q ss_pred ---CCC-CCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCc
Q 011049 212 ---FPH-PYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP 287 (494)
Q Consensus 212 ---~~~-~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~ 287 (494)
+.. ..+...-.+.|.+.|.+..|..+.+.+|.|.+++++++ +|++++++|||.- |+. .+.|.+...
T Consensus 597 ~~~l~~~~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~~pgkk--Yptvl~VYGGP~V------QlV--nnsfkgi~y 666 (867)
T KOG2281|consen 597 WAILVSGAPPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNFQPGKK--YPTVLNVYGGPGV------QLV--NNSFKGIQY 666 (867)
T ss_pred HHHHHhcCCCCCccCChhheeeecCCCcEEEEEEEccccCCCCCC--CceEEEEcCCCce------EEe--eccccceeh
Confidence 001 11122223458899999889999999999999999987 9999999999721 222 244665555
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcC-CCCCCcEEEEecChHHHHHHHHHH
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRG-VADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~-~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
.....|+++||.|+..|.||+.-+|.++.. .+.+.-.++|...++++|.++. ++|.+||+|.|||||||+++++++
T Consensus 667 lR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~ 746 (867)
T KOG2281|consen 667 LRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLA 746 (867)
T ss_pred hhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhh
Confidence 556688999999999999988877776432 2223345789999999999984 899999999999999999999999
Q ss_pred hCCCceeEEEeCCCCCCCCCCCCCccccc-ccccccHHHHHhcCccccccCCC---CCEEEEecCCCCCCCCCHHHHHHH
Q 011049 364 HAPHLFCCGIARSGSYNKTLTPFGFQTEF-RTLWEATNVYIEMSPITHANKIK---KPILIIHGEVDDKVGLFPMQAERF 439 (494)
Q Consensus 364 ~~p~~~~a~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~sp~~~~~~~~---~P~li~~G~~D~~v~~~~~~~~~~ 439 (494)
++|+.|+++|+.+|+++|....-++.... +.|..+...|...|...++.++. ..+|++||--|.+|+ +.+...+
T Consensus 747 ~~P~IfrvAIAGapVT~W~~YDTgYTERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVH--F~Hts~L 824 (867)
T KOG2281|consen 747 QYPNIFRVAIAGAPVTDWRLYDTGYTERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVH--FAHTSRL 824 (867)
T ss_pred cCcceeeEEeccCcceeeeeecccchhhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchh--hhhHHHH
Confidence 99999999999999999887776665543 44556777888888888888874 459999999999998 9999999
Q ss_pred HHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 440 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 440 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
+.+|.++|++.++++||++.|++...+....+-.+++.|+++
T Consensus 825 vs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 825 VSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred HHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 999999999999999999999999888888888889999876
No 4
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.9e-32 Score=275.69 Aligned_cols=392 Identities=22% Similarity=0.240 Sum_probs=267.9
Q ss_pred ceecCCCceEEEEee-eeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEE
Q 011049 46 VSWCDDSLALVNETW-YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 124 (494)
Q Consensus 46 p~wspDg~~i~f~~~-~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~ 124 (494)
|.++.|+....+... .++....+..+....+. +++.+|...-... . ++.++.|..+++|....
T Consensus 345 ~~~~~d~~~~~~~~~~~~~~~~hi~~~~~~~~~-~~~~lt~g~w~v~----~--i~~~~~~~~~i~f~~~~--------- 408 (755)
T KOG2100|consen 345 PVFSSDGSSYLKVDSVSDGGYNHIAYLKLSNGS-EPRMLTSGNWEVT----S--ILGYDKDSNRIYFDAYE--------- 408 (755)
T ss_pred ceEeecCCceeEEEeeccCCEEEEEEEEcCCCC-ccccccccceEEE----E--eccccCCCceEEEEecC---------
Confidence 566666644333322 22113445555544432 4444554433221 0 11145677777776532
Q ss_pred EccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCe-EEEEEcCC
Q 011049 125 LNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQ-YHILSWPL 203 (494)
Q Consensus 125 ~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~-l~~~~~~~ 203 (494)
......+|+.+++.++..+.++..... ..... .+.++++..+.++..+..+..|.. +-....+.
T Consensus 409 -------~~~~~~~ly~i~~~~~~~~~lt~~~~~----~~~~~----~~~~~~~~~~~~v~~~~gP~~p~~~~~~~~~~~ 473 (755)
T KOG2100|consen 409 -------EDPSERHLYSISLGSGTVESLTCSLIT----GPCTY----LSVSFSKSAKYYVLSCSGPKVPDGQLTRHSSKN 473 (755)
T ss_pred -------CCCCceEEEEEEccccccccccccCCC----CcceE----EEEecCCcccEEEEEccCCCCCcceeecccccc
Confidence 112345799999888776666554431 00001 123556666778887777776643 22222221
Q ss_pred Cc-eeEeecCCCCCCc----ccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCC
Q 011049 204 KK-SSQITNFPHPYPT----LASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGS 278 (494)
Q Consensus 204 ~~-~~~lt~~~~~~~~----~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~ 278 (494)
.+ ...|. .+..... ...+..+..++.. ||....+.+++|+++++.++ +|+||.+||||.+ +++...
T Consensus 474 ~~~~~~Le-~n~~~~~~~~~~~~p~~~~~~i~~-~~~~~~~~~~lP~~~~~~~k--yPllv~~yGGP~s-----q~v~~~ 544 (755)
T KOG2100|consen 474 SKTIVVLE-TNEELKKTIENVALPIVEFGKIEI-DGITANAILILPPNFDPSKK--YPLLVVVYGGPGS-----QSVTSK 544 (755)
T ss_pred ceEEEEec-cChhhHHHhhcccCCcceeEEEEe-ccEEEEEEEecCCCCCCCCC--CCEEEEecCCCCc-----ceeeee
Confidence 11 22222 2222211 1122333334443 89999999999999998875 9999999999842 122211
Q ss_pred CCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHH
Q 011049 279 PNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGA 355 (494)
Q Consensus 279 ~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG 355 (494)
+. ..+....+..+|++|+.+|+||+.|+|.+... .+.+...++|+..+++++.+++++|++||+|+||||||
T Consensus 545 ---~~--~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGG 619 (755)
T KOG2100|consen 545 ---FS--VDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGG 619 (755)
T ss_pred ---EE--ecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHH
Confidence 11 11233356789999999999999999987533 34455679999999999999999999999999999999
Q ss_pred HHHHHHHHhCC-CceeEEEeCCCCCCCCCCCCCccccc-ccccccHHHHHhcCccccccCCCCCE-EEEecCCCCCCCCC
Q 011049 356 FMTAHLLAHAP-HLFCCGIARSGSYNKTLTPFGFQTEF-RTLWEATNVYIEMSPITHANKIKKPI-LIIHGEVDDKVGLF 432 (494)
Q Consensus 356 ~~a~~~~~~~p-~~~~a~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~sp~~~~~~~~~P~-li~~G~~D~~v~~~ 432 (494)
|++++++.++| +.|+|+++++|++|+.+....+..+. +.++++...|.+.++..++.+++.|. |++||+.|.+|+
T Consensus 620 y~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~terymg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh-- 697 (755)
T KOG2100|consen 620 YLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERYMGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVH-- 697 (755)
T ss_pred HHHHHHhhhCcCceEEEEEEecceeeeeeecccccHhhcCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcC--
Confidence 99999999998 89999999999999874333333332 44566666799999999999998776 999999999998
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 433 PMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 433 ~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
++|+.+++++|+.+|+++++++||+++|++.......+.+..+..||..++.
T Consensus 698 ~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 698 FQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFG 749 (755)
T ss_pred HHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999878778999999999995544
No 5
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.98 E-value=3.5e-32 Score=242.85 Aligned_cols=196 Identities=28% Similarity=0.441 Sum_probs=166.3
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~---~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
...+.|+++||+|+.+++|++.|+|..+. ...+....++|+.+++++|++++.+|++||+|+|+|+||++++.++.+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 45678899999999999999999887632 344556779999999999999999999999999999999999999999
Q ss_pred CCCceeEEEeCCCCCCCCCCCCC---ccc----ccccccccHHHHHhcCccccccC--CCCCEEEEecCCCCCCCCCHHH
Q 011049 365 APHLFCCGIARSGSYNKTLTPFG---FQT----EFRTLWEATNVYIEMSPITHANK--IKKPILIIHGEVDDKVGLFPMQ 435 (494)
Q Consensus 365 ~p~~~~a~v~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~sp~~~~~~--~~~P~li~~G~~D~~v~~~~~~ 435 (494)
+|++|+++|+.+|+++....... +.. +...++...+.|...+|+..+.+ +++|+||+||++|.+|| +.+
T Consensus 85 ~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp--~~~ 162 (213)
T PF00326_consen 85 HPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVP--PSQ 162 (213)
T ss_dssp TCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSST--THH
T ss_pred cceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCCCccC--HHH
Confidence 99999999999999886443211 111 12445567888999999999999 88999999999999998 999
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 436 AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 436 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+.+++++|+++|+++++++||+++|++...+.....++++++||+++|++
T Consensus 163 s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 163 SLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp HHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999988788889999999999999986
No 6
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.97 E-value=8.2e-28 Score=230.18 Aligned_cols=285 Identities=19% Similarity=0.159 Sum_probs=209.9
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCC-CcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCc
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPY-PTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLP 256 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~~~-~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P 256 (494)
++...+.+..+|.++|.+++-+|+.+++.+.|.....+. -....+.++++..+..||+.|+..|+.-+++. ..++.|
T Consensus 372 ~~s~~lR~~ysS~ttP~~~~~~dm~t~er~~LkqqeV~~g~dp~~Y~s~riwa~a~dgv~VPVSLvyrkd~~--~~g~~p 449 (682)
T COG1770 372 FDSDRLRYSYSSMTTPATLFDYDMATGERTLLKQQEVPGGFDPEDYVSRRIWATADDGVQVPVSLVYRKDTK--LDGSAP 449 (682)
T ss_pred CCCccEEEEeecccccceeEEeeccCCcEEEEEeccCCCCCChhHeEEEEEEEEcCCCcEeeEEEEEecccC--CCCCCc
Confidence 456789999999999999999999999998887655443 34456789999999999999999999988743 356689
Q ss_pred EEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHH--------HHHHHH
Q 011049 257 CLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVE--------QLVSSA 328 (494)
Q Consensus 257 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~--------~~~~d~ 328 (494)
++++.||....+.++ .|+ .....|+.||++.....-||. .+.+..|.+ ..++|+
T Consensus 450 ~lLygYGaYG~s~~p---------~Fs----~~~lSLlDRGfiyAIAHVRGG-----gelG~~WYe~GK~l~K~NTf~DF 511 (682)
T COG1770 450 LLLYGYGAYGISMDP---------SFS----IARLSLLDRGFVYAIAHVRGG-----GELGRAWYEDGKLLNKKNTFTDF 511 (682)
T ss_pred EEEEEeccccccCCc---------Ccc----cceeeeecCceEEEEEEeecc-----cccChHHHHhhhhhhccccHHHH
Confidence 999999976443322 233 234467899987655333332 223333333 237899
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC----CCCCccccccccccc---H--
Q 011049 329 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL----TPFGFQTEFRTLWEA---T-- 399 (494)
Q Consensus 329 ~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~----~~~~~~~~~~~~~~~---~-- 399 (494)
+++.++|+++++.++++|+++|.|+||++...++...|++|+++|+..|+.|... ....+.......|.+ +
T Consensus 512 Ia~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~d~e~ 591 (682)
T COG1770 512 IAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPLDPEY 591 (682)
T ss_pred HHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhhhCCcCCHHH
Confidence 9999999999999999999999999999999999999999999999999987321 111112222223333 2
Q ss_pred -HHHHhcCccccccCCC-CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCC---cEEEEEcCCCCCcc-CCcccHHHHHH
Q 011049 400 -NVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGA---LSRLVLLPFEHHVY-AARENVMHVIW 473 (494)
Q Consensus 400 -~~~~~~sp~~~~~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~---~~~~~~~~~~~H~~-~~~~~~~~~~~ 473 (494)
+.+..+||..++..-. +|+|++.|.+|++|. +.+..+++++|+..+. ++-+.+--++||+- +......+...
T Consensus 592 y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~--YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgRf~~lee~A 669 (682)
T COG1770 592 YDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQ--YWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGRFQRLEEIA 669 (682)
T ss_pred HHHHhhcCchhccccCCCCceEEEccccCCccc--cchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCchHHHHHHH
Confidence 3456789999988765 779999999999998 9999999999998753 45666667899974 33333333334
Q ss_pred HHHHHHHHhcC
Q 011049 474 ETDRWLQKYCL 484 (494)
Q Consensus 474 ~~~~fl~~~l~ 484 (494)
.-..|+.+.+.
T Consensus 670 ~eYaF~l~~~~ 680 (682)
T COG1770 670 FEYAFLLKLAG 680 (682)
T ss_pred HHHHHHhhhcc
Confidence 44667666543
No 7
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=1.3e-24 Score=206.42 Aligned_cols=290 Identities=20% Similarity=0.194 Sum_probs=211.6
Q ss_pred cCcEEEEEEecCCCCCeEEEEEcCCCce----eEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCC
Q 011049 179 NQLKILTSKESKTEITQYHILSWPLKKS----SQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGP 254 (494)
Q Consensus 179 d~~~~~~~~~s~~~p~~l~~~~~~~~~~----~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~ 254 (494)
+...+.|+.+|+..|+.||.+|+..++. .+-...+.+....+.++++++.+++.||+.|+..+++-+.. +..++
T Consensus 392 ~~~~~~f~~sS~l~P~~iy~yDl~~~~~e~~vf~e~~~~lpg~~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~~--k~dg~ 469 (712)
T KOG2237|consen 392 KSSTIRFQFSSFLTPGSIYDYDLANGKPEPSVFREITVVLPGFDASDYVVERIEVSSKDGTKVPMFIVYKKDI--KLDGS 469 (712)
T ss_pred CCceEEEEEeccCCCCeEEEeeccCCCCCCcceeeeccccCcccccceEEEEEEEecCCCCccceEEEEechh--hhcCC
Confidence 3467889999999999999999987732 11122222333445568999999999999999999995543 23456
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchh---HHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRF---VEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~---~~~~~~d~~~~ 331 (494)
.|++++.||+...+..+ .|. .....|..+|++....+-||..++|.++..... -.+.++|++++
T Consensus 470 ~P~LLygYGay~isl~p---------~f~----~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~ 536 (712)
T KOG2237|consen 470 KPLLLYGYGAYGISLDP---------SFR----ASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIAC 536 (712)
T ss_pred CceEEEEecccceeecc---------ccc----cceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHH
Confidence 89999999986332221 132 223356779999888888888788887654222 23458999999
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC----CCCcccccccccccH---HHHHh
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT----PFGFQTEFRTLWEAT---NVYIE 404 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~ 404 (494)
++||++++++.++++++.|.|.||.++..++.++|++|+|+|+..|+.|...+ ......+.-..|.++ +.+..
T Consensus 537 AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g~p~~~~~~~~ 616 (712)
T KOG2237|consen 537 AEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWGNPEDFEDLIK 616 (712)
T ss_pred HHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhcccCChhhhhhhhe
Confidence 99999999999999999999999999999999999999999999999883211 111122222233333 45556
Q ss_pred cCccccccCCC-----CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC-------CcEEEEEcCCCCCccCCccc-HHHH
Q 011049 405 MSPITHANKIK-----KPILIIHGEVDDKVGLFPMQAERFFDALKGHG-------ALSRLVLLPFEHHVYAAREN-VMHV 471 (494)
Q Consensus 405 ~sp~~~~~~~~-----~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g-------~~~~~~~~~~~~H~~~~~~~-~~~~ 471 (494)
.+|+...++++ +-+|+..+.+|.||+ +.++..+.++|+..- .++-+.+..++||+...... +.+.
T Consensus 617 i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~--~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~~~~k~~~E 694 (712)
T KOG2237|consen 617 ISPYSPVDNIKKQVQYPSMLVTTADHDDRVG--PLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEKPRFKQIEE 694 (712)
T ss_pred ecccCccCCCchhccCcceEEeeccCCCccc--ccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCCchHHHHHH
Confidence 66666666653 448999999999998 999999999998642 45788899999998764332 2344
Q ss_pred HHHHHHHHHHhcCC
Q 011049 472 IWETDRWLQKYCLS 485 (494)
Q Consensus 472 ~~~~~~fl~~~l~~ 485 (494)
.....+||.+.+..
T Consensus 695 ~a~~yaFl~K~~~~ 708 (712)
T KOG2237|consen 695 AAFRYAFLAKMLNS 708 (712)
T ss_pred HHHHHHHHHHHhcC
Confidence 55678888887753
No 8
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.94 E-value=7.2e-26 Score=214.10 Aligned_cols=290 Identities=19% Similarity=0.201 Sum_probs=225.5
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCC
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGP 254 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~ 254 (494)
+-+.++..+++...+...|+.+|+.+..+.+.+.+...... -+...+.+|....+|.||++|+++++. ++.+.. +
T Consensus 346 ~~~~~g~ev~l~~t~F~tP~~~~r~~~~~~eLe~ik~~p~~-FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~~~d---~ 420 (648)
T COG1505 346 SADKDGDEVFLAFTSFTTPSTLYRLDLFGGELEVIREQPVQ-FDADNYEVEQFFATSKDGTRIPYFIVR-KGAKKD---E 420 (648)
T ss_pred cCCCCCcEEEEEeecccCCCceEEEecCCceehhhhhccCC-cCccCceEEEEEEEcCCCccccEEEEe-cCCcCC---C
Confidence 33456788888899999999999999988887766544322 234567889999999999999999999 765433 4
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchh---HHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRF---VEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~---~~~~~~d~~~~ 331 (494)
.|++|+.|||.. +.-.|. |++ ....|+++|.+.+..|-||...+|..+..... -...++|..++
T Consensus 421 ~pTll~aYGGF~--------vsltP~-fs~----~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AV 487 (648)
T COG1505 421 NPTLLYAYGGFN--------ISLTPR-FSG----SRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAV 487 (648)
T ss_pred CceEEEeccccc--------cccCCc-cch----hhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHH
Confidence 799999999862 222221 332 23578899988777777777667766443222 23568999999
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC-----CCCCccccccccc--ccHHHHHh
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL-----TPFGFQTEFRTLW--EATNVYIE 404 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~ 404 (494)
.+.|+++++..|++++|.|.|.||.++..+++++|++|.|+|+..|+.|+.- ..+.+..+.+.|- ++...+.+
T Consensus 488 aedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~sW~~EYG~Pd~P~d~~~l~~ 567 (648)
T COG1505 488 AEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAEYGNPDDPEDRAFLLA 567 (648)
T ss_pred HHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccchhhHhhcCCCCCHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999998532 2233444444442 34456788
Q ss_pred cCccccccC-CC-CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccH-HHHHHHHHHHHHH
Q 011049 405 MSPITHANK-IK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENV-MHVIWETDRWLQK 481 (494)
Q Consensus 405 ~sp~~~~~~-~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~-~~~~~~~~~fl~~ 481 (494)
+||+.+++. .+ +|+||..+.+|.+|+ +.++++|+.+|++.+.++-+.+-.+.||+-...... ......+..||.+
T Consensus 568 YSPy~nl~~g~kYP~~LITTs~~DDRVH--PaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r 645 (648)
T COG1505 568 YSPYHNLKPGQKYPPTLITTSLHDDRVH--PAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLR 645 (648)
T ss_pred cCchhcCCccccCCCeEEEccccccccc--chHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHH
Confidence 999999887 33 889999999999998 999999999999999999998888999987654443 3455667889988
Q ss_pred hcC
Q 011049 482 YCL 484 (494)
Q Consensus 482 ~l~ 484 (494)
.|.
T Consensus 646 ~L~ 648 (648)
T COG1505 646 TLG 648 (648)
T ss_pred hhC
Confidence 764
No 9
>PLN02442 S-formylglutathione hydrolase
Probab=99.90 E-value=5.2e-22 Score=183.92 Aligned_cols=240 Identities=23% Similarity=0.249 Sum_probs=154.6
Q ss_pred ccEEEEEEc-CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 223 QKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~-~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
..+.+++.| .-|.++++.+|+|+.. ++ .++|+|+++||.+. +...|.... .....+...||+|+
T Consensus 17 ~~~~~~~~s~~l~~~~~~~vy~P~~~-~~--~~~Pvv~~lHG~~~-----------~~~~~~~~~-~~~~~~~~~g~~Vv 81 (283)
T PLN02442 17 FNRRYKHFSSTLGCSMTFSVYFPPAS-DS--GKVPVLYWLSGLTC-----------TDENFIQKS-GAQRAAAARGIALV 81 (283)
T ss_pred EEEEEEEeccccCCceEEEEEcCCcc-cC--CCCCEEEEecCCCc-----------ChHHHHHhh-hHHHHHhhcCeEEE
Confidence 455666665 3567999999999842 22 34999999999642 111221111 12234567899999
Q ss_pred eCCCCCCC------------CCCCCC----C-----CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHH
Q 011049 302 AGPSIPII------------GEGDKL----P-----NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH 360 (494)
Q Consensus 302 ~~~~~~~~------------g~g~~~----~-----~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~ 360 (494)
+++..... +.+.+. . ...+.....+++...++...+ .+|+++++|+|+|+||++++.
T Consensus 82 ~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~--~~~~~~~~i~G~S~GG~~a~~ 159 (283)
T PLN02442 82 APDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFD--QLDTSRASIFGHSMGGHGALT 159 (283)
T ss_pred ecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHH--hcCCCceEEEEEChhHHHHHH
Confidence 97753210 111110 0 011223334444444443332 268899999999999999999
Q ss_pred HHHhCCCceeEEEeCCCCCCCCCCCCCcc---cccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHH-HH
Q 011049 361 LLAHAPHLFCCGIARSGSYNKTLTPFGFQ---TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPM-QA 436 (494)
Q Consensus 361 ~~~~~p~~~~a~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~-~~ 436 (494)
++.++|++|+++++.+|+.+.....+... ...+......+.+...+++..+.+.++|+|++||++|..++ .. ++
T Consensus 160 ~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~--~~~~s 237 (283)
T PLN02442 160 IYLKNPDKYKSVSAFAPIANPINCPWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLK--EQLLP 237 (283)
T ss_pred HHHhCchhEEEEEEECCccCcccCchhhHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCcccc--ccccH
Confidence 99999999999999999877432222111 01111111222333344455565678999999999999986 53 57
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 437 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 437 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
+.+++++++.|.+++++++|+++|.+. ....++.+.+.|..++++
T Consensus 238 ~~~~~~l~~~g~~~~~~~~pg~~H~~~---~~~~~i~~~~~~~~~~~~ 282 (283)
T PLN02442 238 ENFEEACKEAGAPVTLRLQPGYDHSYF---FIATFIDDHINHHAQALK 282 (283)
T ss_pred HHHHHHHHHcCCCeEEEEeCCCCccHH---HHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999875 334555566667666654
No 10
>PRK10566 esterase; Provisional
Probab=99.90 E-value=7.4e-22 Score=181.04 Aligned_cols=220 Identities=19% Similarity=0.247 Sum_probs=146.8
Q ss_pred ceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCC
Q 011049 235 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK 314 (494)
Q Consensus 235 ~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~ 314 (494)
..+..+.+.|.+. .+++.|+||++||.+. +...+ ...+..|+++||.|+++++++. |.+
T Consensus 10 ~~~~~~~~~p~~~---~~~~~p~vv~~HG~~~-----------~~~~~----~~~~~~l~~~G~~v~~~d~~g~---G~~ 68 (249)
T PRK10566 10 AGIEVLHAFPAGQ---RDTPLPTVFFYHGFTS-----------SKLVY----SYFAVALAQAGFRVIMPDAPMH---GAR 68 (249)
T ss_pred cCcceEEEcCCCC---CCCCCCEEEEeCCCCc-----------ccchH----HHHHHHHHhCCCEEEEecCCcc---ccc
Confidence 3566677888642 1234799999999642 11112 2356688899999999777643 322
Q ss_pred CC------Cchh---HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC--CCCCC-
Q 011049 315 LP------NDRF---VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG--SYNKT- 382 (494)
Q Consensus 315 ~~------~~~~---~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~--~~~~~- 382 (494)
.. ...+ .....+|+.++++++.+++.+|++||+++|||+||++++.++.++|+. ++++...+ .+...
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~-~~~~~~~~~~~~~~~~ 147 (249)
T PRK10566 69 FSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWV-KCVASLMGSGYFTSLA 147 (249)
T ss_pred CCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCe-eEEEEeeCcHHHHHHH
Confidence 11 0111 123467888889999998889999999999999999999999998765 44433322 11100
Q ss_pred --CCCCCccccc---ccccccHHHHHhcCccccccCC-CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc--EEEEE
Q 011049 383 --LTPFGFQTEF---RTLWEATNVYIEMSPITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL--SRLVL 454 (494)
Q Consensus 383 --~~~~~~~~~~---~~~~~~~~~~~~~sp~~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~--~~~~~ 454 (494)
..+....... .........+...++...+.++ ++|+|++||++|..|| +.++++++++|+.+|.+ +++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~--~~~~~~l~~~l~~~g~~~~~~~~~ 225 (249)
T PRK10566 148 RTLFPPLIPETAAQQAEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVP--AAESLRLQQALRERGLDKNLTCLW 225 (249)
T ss_pred HHhcccccccccccHHHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCC--HHHHHHHHHHHHhcCCCcceEEEe
Confidence 0000000000 0000011123334555566676 6999999999999998 99999999999998864 78999
Q ss_pred cCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 455 LPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 455 ~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
|++++|.+. ...+.++.+||+++|
T Consensus 226 ~~~~~H~~~-----~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 226 EPGVRHRIT-----PEALDAGVAFFRQHL 249 (249)
T ss_pred cCCCCCccC-----HHHHHHHHHHHHhhC
Confidence 999999875 256889999999875
No 11
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.89 E-value=1.1e-21 Score=181.64 Aligned_cols=239 Identities=18% Similarity=0.203 Sum_probs=153.0
Q ss_pred ccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHH-HhCCeEE
Q 011049 223 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARRFAV 300 (494)
Q Consensus 223 ~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G~~v 300 (494)
+.+.+++.+. -+.++.+.+|+|+++... ++|+|+++||.+.. ...|... .....+ .+.||.|
T Consensus 12 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~~---~~P~vvllHG~~~~-----------~~~~~~~--~~~~~la~~~g~~V 75 (275)
T TIGR02821 12 TQGFYRHKSETCGVPMTFGVFLPPQAAAG---PVPVLWYLSGLTCT-----------HENFMIK--AGAQRFAAEHGLAL 75 (275)
T ss_pred EEEEEEEeccccCCceEEEEEcCCCccCC---CCCEEEEccCCCCC-----------ccHHHhh--hHHHHHHhhcCcEE
Confidence 4555666654 567889999999875432 38999999997521 1122111 112234 4579999
Q ss_pred EeCCCCCCCCCCCC-------------CC----Cchh--HHHHHHHHHHHHHHHH-HcCCCCCCcEEEEecChHHHHHHH
Q 011049 301 LAGPSIPIIGEGDK-------------LP----NDRF--VEQLVSSAEAAVEEVV-RRGVADPSRIAVGGHSYGAFMTAH 360 (494)
Q Consensus 301 ~~~~~~~~~g~g~~-------------~~----~~~~--~~~~~~d~~~~v~~l~-~~~~~d~~ri~i~G~S~GG~~a~~ 360 (494)
++++.. ..|.+.. +. ...+ .......+...+..++ +...+|.++++|+|+||||++++.
T Consensus 76 v~Pd~~-~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~ 154 (275)
T TIGR02821 76 VAPDTS-PRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALV 154 (275)
T ss_pred EEeCCC-CCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHH
Confidence 998762 1222210 00 0000 0011222222333333 334478899999999999999999
Q ss_pred HHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccC--CCCCEEEEecCCCCCCCCCH-HHHH
Q 011049 361 LLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANK--IKKPILIIHGEVDDKVGLFP-MQAE 437 (494)
Q Consensus 361 ~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~--~~~P~li~~G~~D~~v~~~~-~~~~ 437 (494)
++.++|++|+++++++|+.+.....+...........+.+.+...+|...+.+ ..+|+++.||+.|+++| . .++.
T Consensus 155 ~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~--~~~~~~ 232 (275)
T TIGR02821 155 IALKNPDRFKSVSAFAPIVAPSRCPWGQKAFSAYLGADEAAWRSYDASLLVADGGRHSTILIDQGTADQFLD--EQLRPD 232 (275)
T ss_pred HHHhCcccceEEEEECCccCcccCcchHHHHHHHhcccccchhhcchHHHHhhcccCCCeeEeecCCCcccC--ccccHH
Confidence 99999999999999999877432221100000000111223334455554443 45899999999999987 7 5788
Q ss_pred HHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 438 RFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 438 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
.+.++|+++++++++.++|+++|+|.. ....+.+.++|+.+++
T Consensus 233 ~~~~~l~~~g~~v~~~~~~g~~H~f~~---~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 233 AFEQACRAAGQALTLRRQAGYDHSYYF---IASFIADHLRHHAERL 275 (275)
T ss_pred HHHHHHHHcCCCeEEEEeCCCCccchh---HHHhHHHHHHHHHhhC
Confidence 999999999999999999999999853 4466777788887764
No 12
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.89 E-value=6.4e-21 Score=182.24 Aligned_cols=242 Identities=16% Similarity=0.201 Sum_probs=163.6
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
.++.+...+++.||.++.+..+.|.+. ..+.|+||++||.+.. ..|. .......|+++||.|
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~~----~~~~~~VvllHG~~~~------------~~~~--~~~~~~~L~~~Gy~V 90 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSSS----SPPRALIFMVHGYGND------------ISWT--FQSTAIFLAQMGFAC 90 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCCC----CCCceEEEEEcCCCCC------------ccee--hhHHHHHHHhCCCEE
Confidence 345666778889999999999988642 1236899999996310 0111 112344678899999
Q ss_pred EeCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC
Q 011049 301 LAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 377 (494)
+++|.+ |+|.+... ....+...+|+.++++++......+..+++|+|||+||.+++.++.++|++++++|+.+|
T Consensus 91 ~~~D~r---GhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~ 167 (330)
T PLN02298 91 FALDLE---GHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAP 167 (330)
T ss_pred EEecCC---CCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecc
Confidence 996655 55555321 123466789999999999876444556899999999999999999999999999999988
Q ss_pred CCCCCCC---CCCcc-----------c----cccccc------ccHHHHHhcCc----------------------cccc
Q 011049 378 SYNKTLT---PFGFQ-----------T----EFRTLW------EATNVYIEMSP----------------------ITHA 411 (494)
Q Consensus 378 ~~~~~~~---~~~~~-----------~----~~~~~~------~~~~~~~~~sp----------------------~~~~ 411 (494)
....... .+... . ...... .....+...+| ...+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 247 (330)
T PLN02298 168 MCKISDKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKL 247 (330)
T ss_pred cccCCcccCCchHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhh
Confidence 6432110 00000 0 000000 00001111111 1235
Q ss_pred cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc---cHHHHHHHHHHHHHHhcCCCC
Q 011049 412 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE---NVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 412 ~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~---~~~~~~~~~~~fl~~~l~~~~ 487 (494)
.++++|+||+||++|..+| +..++.+++.+... ..+++++++++|.+...+ ....+.+.+.+||.+++....
T Consensus 248 ~~i~~PvLii~G~~D~ivp--~~~~~~l~~~i~~~--~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~ 322 (330)
T PLN02298 248 KDVSIPFIVLHGSADVVTD--PDVSRALYEEAKSE--DKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKA 322 (330)
T ss_pred hhcCCCEEEEecCCCCCCC--HHHHHHHHHHhccC--CceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCC
Confidence 6788999999999999998 89999988887643 358899999999975322 234677889999999986553
No 13
>PRK13604 luxD acyl transferase; Provisional
Probab=99.88 E-value=5.7e-21 Score=173.02 Aligned_cols=211 Identities=13% Similarity=0.017 Sum_probs=144.0
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
....+.+.||.+|.||+..|++.. ..+.|+||+.||-+ +... .....+..|+++||+|+..|
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~---~~~~~~vIi~HGf~-----------~~~~----~~~~~A~~La~~G~~vLrfD 71 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENS---PKKNNTILIASGFA-----------RRMD----HFAGLAEYLSSNGFHVIRYD 71 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccC---CCCCCEEEEeCCCC-----------CChH----HHHHHHHHHHHCCCEEEEec
Confidence 334567789999999999997522 23478999999842 1111 12345668899999999977
Q ss_pred CCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC
Q 011049 305 SIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT 382 (494)
Q Consensus 305 ~~~~~g~g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~ 382 (494)
.++.. |.+... .........|+.++++|+.++. .++|+++|||+||.+++.+|... .++++|+.+|+.+..
T Consensus 72 ~rg~~--GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 72 SLHHV--GLSSGTIDEFTMSIGKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLR 144 (307)
T ss_pred CCCCC--CCCCCccccCcccccHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHH
Confidence 65432 222111 1112234789999999998864 46899999999999987666643 489999999998721
Q ss_pred C------CC----CCcccc-------ccccc--ccHHH------HHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHH
Q 011049 383 L------TP----FGFQTE-------FRTLW--EATNV------YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAE 437 (494)
Q Consensus 383 ~------~~----~~~~~~-------~~~~~--~~~~~------~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~ 437 (494)
. .. +.+... ..... ...+. ....+|+..+++++.|+|++||+.|..|| +..++
T Consensus 145 d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp--~~~s~ 222 (307)
T PRK13604 145 DTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVK--QSEVI 222 (307)
T ss_pred HHHHHhhhcccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccC--HHHHH
Confidence 0 00 000000 00000 00000 11345667788889999999999999998 99999
Q ss_pred HHHHHHHhCCCcEEEEEcCCCCCccCC
Q 011049 438 RFFDALKGHGALSRLVLLPFEHHVYAA 464 (494)
Q Consensus 438 ~~~~~l~~~g~~~~~~~~~~~~H~~~~ 464 (494)
+++++++. .+++++++||+.|.+..
T Consensus 223 ~l~e~~~s--~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 223 DLLDSIRS--EQCKLYSLIGSSHDLGE 247 (307)
T ss_pred HHHHHhcc--CCcEEEEeCCCccccCc
Confidence 99998764 45799999999999873
No 14
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.88 E-value=6.3e-22 Score=177.17 Aligned_cols=201 Identities=23% Similarity=0.252 Sum_probs=140.8
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCC-CCCCC
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG-EGDKL 315 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g-~g~~~ 315 (494)
+.+++..|++. ++.|.||++|+.. | +.......+..|+++||.|+++|.+...+ .-...
T Consensus 1 ~~ay~~~P~~~-----~~~~~Vvv~~d~~-----------G----~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~ 60 (218)
T PF01738_consen 1 IDAYVARPEGG-----GPRPAVVVIHDIF-----------G----LNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDP 60 (218)
T ss_dssp EEEEEEEETTS-----SSEEEEEEE-BTT-----------B----S-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCH
T ss_pred CeEEEEeCCCC-----CCCCEEEEEcCCC-----------C----CchHHHHHHHHHHhcCCCEEecccccCCCCCccch
Confidence 57899999872 4589999999742 1 21112235668899999999988865444 11110
Q ss_pred C-Cc-hh-------HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC
Q 011049 316 P-ND-RF-------VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF 386 (494)
Q Consensus 316 ~-~~-~~-------~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~ 386 (494)
. .. .+ .+....|+.+++++|.+++.++.+||+++|+|+||.+++.++... ..++++|+..|...
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~------ 133 (218)
T PF01738_consen 61 EEAFAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP------ 133 (218)
T ss_dssp HCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS------
T ss_pred hhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC------
Confidence 0 00 11 234578888999999999888899999999999999999998887 78999999888100
Q ss_pred CcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc
Q 011049 387 GFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE 466 (494)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 466 (494)
...+.....++++|+|+++|++|+.++ .+...++.+.|++.+.++++.+||+++|+|....
T Consensus 134 -----------------~~~~~~~~~~~~~P~l~~~g~~D~~~~--~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~ 194 (218)
T PF01738_consen 134 -----------------PPPPLEDAPKIKAPVLILFGENDPFFP--PEEVEALEEALKAAGVDVEVHVYPGAGHGFANPS 194 (218)
T ss_dssp -----------------GGGHHHHGGG--S-EEEEEETT-TTS---HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTT
T ss_pred -----------------CCcchhhhcccCCCEeecCccCCCCCC--hHHHHHHHHHHHhcCCcEEEEECCCCcccccCCC
Confidence 012233456788999999999999998 8888999999999999999999999999996533
Q ss_pred -------cHHHHHHHHHHHHHHhc
Q 011049 467 -------NVMHVIWETDRWLQKYC 483 (494)
Q Consensus 467 -------~~~~~~~~~~~fl~~~l 483 (494)
...+.++++++||++||
T Consensus 195 ~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 195 RPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp STT--HHHHHHHHHHHHHHHCC--
T ss_pred CcccCHHHHHHHHHHHHHHHHhcC
Confidence 23467889999999886
No 15
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.88 E-value=8.5e-21 Score=184.35 Aligned_cols=230 Identities=17% Similarity=0.156 Sum_probs=152.0
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
....+.++++..+|.++++++++|+. .++.|+||+.||.+ +.. ..........|+++||+|
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~-----~~~~P~Vli~gG~~-----------~~~---~~~~~~~~~~La~~Gy~v 225 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKG-----DGPFPTVLVCGGLD-----------SLQ---TDYYRLFRDYLAPRGIAM 225 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCC-----CCCccEEEEeCCcc-----------cch---hhhHHHHHHHHHhCCCEE
Confidence 34578999998898899999999973 23479888766532 000 001112445788999999
Q ss_pred EeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 301 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
+++|.+ |+|.+.... ...+......+++++|...+.+|.+||+++|+|+||++++.++..+|++++++|+.+|+.+
T Consensus 226 l~~D~p---G~G~s~~~~-~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 226 LTIDMP---SVGFSSKWK-LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVH 301 (414)
T ss_pred EEECCC---CCCCCCCCC-ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccc
Confidence 996665 444432211 0011122235778999999889999999999999999999999999999999999998865
Q ss_pred CCCCCCC--------cc----cccccccccHHHH----HhcCcc--c-cccCCCCCEEEEecCCCCCCCCCHHHHHHHHH
Q 011049 381 KTLTPFG--------FQ----TEFRTLWEATNVY----IEMSPI--T-HANKIKKPILIIHGEVDDKVGLFPMQAERFFD 441 (494)
Q Consensus 381 ~~~~~~~--------~~----~~~~~~~~~~~~~----~~~sp~--~-~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~ 441 (494)
....... +. ...+......+.+ ...+.. . ...++++|+|++||++|+++| +.+++.+.+
T Consensus 302 ~~~~~~~~~~~~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP--~~~a~~l~~ 379 (414)
T PRK05077 302 TLLTDPKRQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSP--EEDSRLIAS 379 (414)
T ss_pred hhhcchhhhhhchHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCC--HHHHHHHHH
Confidence 2111100 00 0000001111111 111111 1 125688999999999999998 888876654
Q ss_pred HHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 442 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 442 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
.. .+.+++++|+. |. .+....++..+.+||.++|
T Consensus 380 ~~----~~~~l~~i~~~-~~---~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 380 SS----ADGKLLEIPFK-PV---YRNFDKALQEISDWLEDRL 413 (414)
T ss_pred hC----CCCeEEEccCC-Cc---cCCHHHHHHHHHHHHHHHh
Confidence 43 34678999986 32 2466789999999999886
No 16
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.87 E-value=3.4e-20 Score=165.45 Aligned_cols=212 Identities=19% Similarity=0.206 Sum_probs=164.0
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
+.+++++.| .++.+++.+|.+ .++.|+||++|+.. | ........+..|+.+||.|++++
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~-----~~~~P~VIv~hei~-----------G----l~~~i~~~a~rlA~~Gy~v~~Pd 61 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAG-----AGGFPGVIVLHEIF-----------G----LNPHIRDVARRLAKAGYVVLAPD 61 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCc-----CCCCCEEEEEeccc-----------C----CchHHHHHHHHHHhCCcEEEech
Confidence 467788777 799999999987 33459999999742 1 11223345678999999999987
Q ss_pred CCCCCCCCCCCC--C----c-----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEE
Q 011049 305 SIPIIGEGDKLP--N----D-----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 373 (494)
Q Consensus 305 ~~~~~g~g~~~~--~----~-----~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v 373 (494)
.+...|...... . . ........|+.++++||.+++.++++||+++|+|+||.+++.++.+.| .+++++
T Consensus 62 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v 140 (236)
T COG0412 62 LYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAV 140 (236)
T ss_pred hhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEE
Confidence 665433322211 0 0 111466889999999999999899999999999999999999999986 789999
Q ss_pred eCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEE
Q 011049 374 ARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLV 453 (494)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~ 453 (494)
++.|..-. +......++++|+|+.+|+.|..+| ......+.+++.++++++++.
T Consensus 141 ~fyg~~~~------------------------~~~~~~~~~~~pvl~~~~~~D~~~p--~~~~~~~~~~~~~~~~~~~~~ 194 (236)
T COG0412 141 AFYGGLIA------------------------DDTADAPKIKVPVLLHLAGEDPYIP--AADVDALAAALEDAGVKVDLE 194 (236)
T ss_pred EecCCCCC------------------------CcccccccccCcEEEEecccCCCCC--hhHHHHHHHHHHhcCCCeeEE
Confidence 99884221 0111256789999999999999998 888899999999998899999
Q ss_pred EcCCCCCccCCcc----------cHHHHHHHHHHHHHHhcC
Q 011049 454 LLPFEHHVYAARE----------NVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 454 ~~~~~~H~~~~~~----------~~~~~~~~~~~fl~~~l~ 484 (494)
+|+++.|+|.... .....++++++||.+++.
T Consensus 195 ~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 195 IYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred EeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999999998432 124678899999999875
No 17
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.86 E-value=6.3e-21 Score=177.36 Aligned_cols=232 Identities=21% Similarity=0.179 Sum_probs=154.0
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
......|+|++.+|..|.+++++|++. ++++|+||.+||.+... . .......++.+||+|
T Consensus 53 ~~~vy~v~f~s~~g~~V~g~l~~P~~~----~~~~Pavv~~hGyg~~~-----------~-----~~~~~~~~a~~G~~v 112 (320)
T PF05448_consen 53 GVEVYDVSFESFDGSRVYGWLYRPKNA----KGKLPAVVQFHGYGGRS-----------G-----DPFDLLPWAAAGYAV 112 (320)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEES-S----SSSEEEEEEE--TT--G-----------G-----GHHHHHHHHHTT-EE
T ss_pred CEEEEEEEEEccCCCEEEEEEEecCCC----CCCcCEEEEecCCCCCC-----------C-----CcccccccccCCeEE
Confidence 456788999999999999999999852 35599999999854110 0 112234679999999
Q ss_pred EeCCCCCCCCCC------------------CCC-CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHH
Q 011049 301 LAGPSIPIIGEG------------------DKL-PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361 (494)
Q Consensus 301 ~~~~~~~~~g~g------------------~~~-~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~ 361 (494)
+.++.+|..|.. ... ....+...++.|+..++++|.+++.+|++||+++|.|.||.+++.+
T Consensus 113 l~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~ 192 (320)
T PF05448_consen 113 LAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAA 192 (320)
T ss_dssp EEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHH
T ss_pred EEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHH
Confidence 997766554211 111 2233456678999999999999999999999999999999999999
Q ss_pred HHhCCCceeEEEeCCCCCCCCC-----C--CCCccc---ccc----cccc---cHHHHHhcCccccccCCCCCEEEEecC
Q 011049 362 LAHAPHLFCCGIARSGSYNKTL-----T--PFGFQT---EFR----TLWE---ATNVYIEMSPITHANKIKKPILIIHGE 424 (494)
Q Consensus 362 ~~~~p~~~~a~v~~~~~~~~~~-----~--~~~~~~---~~~----~~~~---~~~~~~~~sp~~~~~~~~~P~li~~G~ 424 (494)
++.. ++++++++..|...... . ...+.. ..+ ..-. ..+.+...+..+.+.+|++|+|+..|-
T Consensus 193 aaLd-~rv~~~~~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl 271 (320)
T PF05448_consen 193 AALD-PRVKAAAADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGL 271 (320)
T ss_dssp HHHS-ST-SEEEEESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEET
T ss_pred HHhC-ccccEEEecCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEec
Confidence 9998 57999999888643110 0 011100 000 0001 123345567888899999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 425 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 425 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
.|+.|| +......+..+.. +.++.+||..+|.... ....++.++||.+|
T Consensus 272 ~D~~cP--P~t~fA~yN~i~~---~K~l~vyp~~~He~~~----~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 272 QDPVCP--PSTQFAAYNAIPG---PKELVVYPEYGHEYGP----EFQEDKQLNFLKEH 320 (320)
T ss_dssp T-SSS---HHHHHHHHCC--S---SEEEEEETT--SSTTH----HHHHHHHHHHHHH-
T ss_pred CCCCCC--chhHHHHHhccCC---CeeEEeccCcCCCchh----hHHHHHHHHHHhcC
Confidence 999988 8888888888864 4799999999996542 23367789999876
No 18
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.86 E-value=5.6e-20 Score=176.80 Aligned_cols=235 Identities=14% Similarity=0.145 Sum_probs=156.9
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
.+...+.+.||.++.+..+.|++- .+.|+||++||.+.. .. + +.......|+++||.|+++
T Consensus 61 ~~~~~~~~~~g~~l~~~~~~p~~~-----~~~~~iv~lHG~~~~-----------~~-~--~~~~~~~~l~~~g~~v~~~ 121 (349)
T PLN02385 61 TEESYEVNSRGVEIFSKSWLPENS-----RPKAAVCFCHGYGDT-----------CT-F--FFEGIARKIASSGYGVFAM 121 (349)
T ss_pred eeeeeEEcCCCCEEEEEEEecCCC-----CCCeEEEEECCCCCc-----------cc-h--HHHHHHHHHHhCCCEEEEe
Confidence 344456668999999999998641 236899999996411 00 0 1112345677899999996
Q ss_pred CCCCCCCCCCCCCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 304 PSIPIIGEGDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~---~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
|.+ |+|.+.... ...+..++|+.+.++.+..+...+..++.++||||||.+++.++.++|++++++|+++|...
T Consensus 122 D~~---G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~ 198 (349)
T PLN02385 122 DYP---GFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCK 198 (349)
T ss_pred cCC---CCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccc
Confidence 665 556554321 13456788888888888665444556899999999999999999999999999999988643
Q ss_pred CCC---CCCC----------------c-cc-cc-ccccccH-----------------------HHHHh-cCccccccCC
Q 011049 381 KTL---TPFG----------------F-QT-EF-RTLWEAT-----------------------NVYIE-MSPITHANKI 414 (494)
Q Consensus 381 ~~~---~~~~----------------~-~~-~~-~~~~~~~-----------------------~~~~~-~sp~~~~~~~ 414 (494)
... .... . .. .. ...+... +.+.. .+....+.++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i 278 (349)
T PLN02385 199 IADDVVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEV 278 (349)
T ss_pred ccccccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccC
Confidence 110 0000 0 00 00 0000000 00100 0112345678
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCccc---HHHHHHHHHHHHHHhcC
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN---VMHVIWETDRWLQKYCL 484 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~---~~~~~~~~~~fl~~~l~ 484 (494)
++|+|++||++|..+| +..++.+++.+... +.+++++++++|.+...+. ...++..+.+||++++.
T Consensus 279 ~~P~Lii~G~~D~vv~--~~~~~~l~~~~~~~--~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 279 SLPLLILHGEADKVTD--PSVSKFLYEKASSS--DKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred CCCEEEEEeCCCCccC--hHHHHHHHHHcCCC--CceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 9999999999999998 88888888877543 3588899999999763221 34588899999999875
No 19
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.86 E-value=8.2e-20 Score=160.34 Aligned_cols=234 Identities=18% Similarity=0.198 Sum_probs=165.9
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
...-.+++.+|..+....+.|.+- ..+..+|+++||.+... .......+..|+..||.|+..
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~----~~pr~lv~~~HG~g~~~--------------s~~~~~~a~~l~~~g~~v~a~ 88 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSG----TEPRGLVFLCHGYGEHS--------------SWRYQSTAKRLAKSGFAVYAI 88 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCC----CCCceEEEEEcCCcccc--------------hhhHHHHHHHHHhCCCeEEEe
Confidence 444567788999999999999652 13468999999954110 011223566889999999995
Q ss_pred CCCCCCCCCCCCCCch---hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 304 PSIPIIGEGDKLPNDR---FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~~---~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
|+ .|+|.+..... -.+..++|+..-++.++.+..-.....+++||||||.+++.++.++|+.+.++|+.+|+.-
T Consensus 89 D~---~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~ 165 (313)
T KOG1455|consen 89 DY---EGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCK 165 (313)
T ss_pred ec---cCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccc
Confidence 54 46666654333 3567789999999988777544456789999999999999999999999999999998753
Q ss_pred CCC-------------------CCCCc-ccc--cccccccHH--HHHhcCc----------------------cccccCC
Q 011049 381 KTL-------------------TPFGF-QTE--FRTLWEATN--VYIEMSP----------------------ITHANKI 414 (494)
Q Consensus 381 ~~~-------------------~~~~~-~~~--~~~~~~~~~--~~~~~sp----------------------~~~~~~~ 414 (494)
... ..|.. ... ......+++ .....+| ..++.++
T Consensus 166 i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~v 245 (313)
T KOG1455|consen 166 ISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEV 245 (313)
T ss_pred cCCccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccc
Confidence 110 01110 000 000001111 1111222 3456788
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC---CcccHHHHHHHHHHHHHHh
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA---ARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~---~~~~~~~~~~~~~~fl~~~ 482 (494)
+.|+|++||+.|.+.. +.-++++++......+ ++.+|||.-|.+. ..++.+.++..|++||+++
T Consensus 246 tvPflilHG~dD~VTD--p~~Sk~Lye~A~S~DK--TlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 246 TVPFLILHGTDDKVTD--PKVSKELYEKASSSDK--TLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cccEEEEecCCCcccC--cHHHHHHHHhccCCCC--ceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999999976 9999999999887665 7889999999976 3567788999999999876
No 20
>PRK10162 acetyl esterase; Provisional
Probab=99.85 E-value=1.3e-19 Score=170.99 Aligned_cols=229 Identities=15% Similarity=0.167 Sum_probs=157.5
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEE
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~ 301 (494)
..+.+++++.+| .+.+.+|.|.. . +.|+||++|||+|..+ +...+. .....|+. .|+.|+
T Consensus 56 ~~~~~~i~~~~g-~i~~~~y~P~~---~---~~p~vv~~HGGg~~~g--------~~~~~~----~~~~~la~~~g~~Vv 116 (318)
T PRK10162 56 ATRAYMVPTPYG-QVETRLYYPQP---D---SQATLFYLHGGGFILG--------NLDTHD----RIMRLLASYSGCTVI 116 (318)
T ss_pred eEEEEEEecCCC-ceEEEEECCCC---C---CCCEEEEEeCCcccCC--------Cchhhh----HHHHHHHHHcCCEEE
Confidence 467788888887 69999999963 1 2699999999986432 222222 23446666 699999
Q ss_pred eCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhC------CCceeEE
Q 011049 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA------PHLFCCG 372 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~------p~~~~a~ 372 (494)
.++++..... .+ ...++|+.++++|+.++ ..+|++||+|+|+|+||.+++.++.+. +.+++++
T Consensus 117 ~vdYrlape~-------~~-p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~ 188 (318)
T PRK10162 117 GIDYTLSPEA-------RF-PQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGV 188 (318)
T ss_pred EecCCCCCCC-------CC-CCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhhe
Confidence 9898754321 11 22467888888988764 347899999999999999999988653 3578899
Q ss_pred EeCCCCCCCCCCCCCccccccccc-----ccHHH----HH-----hcCccccc--cCC---CCCEEEEecCCCCCCCCCH
Q 011049 373 IARSGSYNKTLTPFGFQTEFRTLW-----EATNV----YI-----EMSPITHA--NKI---KKPILIIHGEVDDKVGLFP 433 (494)
Q Consensus 373 v~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~----~~-----~~sp~~~~--~~~---~~P~li~~G~~D~~v~~~~ 433 (494)
++++|+.+..... ... .....| ...+. |. ..+|.... ..+ -.|++|++|+.|++ .
T Consensus 189 vl~~p~~~~~~~~-s~~-~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L----~ 262 (318)
T PRK10162 189 LLWYGLYGLRDSV-SRR-LLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPL----L 262 (318)
T ss_pred EEECCccCCCCCh-hHH-HhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcC----c
Confidence 9999987642111 000 000011 00011 11 12333211 222 37999999999998 4
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCCCCCccCCc----ccHHHHHHHHHHHHHHhcC
Q 011049 434 MQAERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 434 ~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~l~ 484 (494)
.+++.+.++|++.|+++++++|++..|+|... +.....++.+.+||.++++
T Consensus 263 de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 263 DDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred ChHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 68899999999999999999999999998532 2234678889999998875
No 21
>PHA02857 monoglyceride lipase; Provisional
Probab=99.85 E-value=2.4e-19 Score=167.03 Aligned_cols=224 Identities=17% Similarity=0.127 Sum_probs=151.5
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+.+.||.++.+.+|.|.+ .+.|+|+++||.+.. ...| ......|+++||.|+++|.+
T Consensus 5 ~~~~~g~~l~~~~~~~~~------~~~~~v~llHG~~~~-----------~~~~----~~~~~~l~~~g~~via~D~~-- 61 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPIT------YPKALVFISHGAGEH-----------SGRY----EELAENISSLGILVFSHDHI-- 61 (276)
T ss_pred eecCCCCEEEEEeccCCC------CCCEEEEEeCCCccc-----------cchH----HHHHHHHHhCCCEEEEccCC--
Confidence 345699999999998852 236889999996421 1112 24566788899999995554
Q ss_pred CCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC
Q 011049 309 IGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP 385 (494)
Q Consensus 309 ~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~ 385 (494)
|+|.+... .......++|+...++++.+.. ...+++++|||+||.+++.++.++|++++++|+.+|..+.....
T Consensus 62 -G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~ 138 (276)
T PHA02857 62 -GHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVP 138 (276)
T ss_pred -CCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccccccc
Confidence 55655322 1223455788888888776542 23679999999999999999999999999999999865421100
Q ss_pred CC-----------cccc----ccccc--ccH---HHHH--------------------h-cCccccccCCCCCEEEEecC
Q 011049 386 FG-----------FQTE----FRTLW--EAT---NVYI--------------------E-MSPITHANKIKKPILIIHGE 424 (494)
Q Consensus 386 ~~-----------~~~~----~~~~~--~~~---~~~~--------------------~-~sp~~~~~~~~~P~li~~G~ 424 (494)
.. +... ....+ ... ..+. . ......+.++++|+|+++|+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~ 218 (276)
T PHA02857 139 RLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGT 218 (276)
T ss_pred HHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecC
Confidence 00 0000 00000 000 0000 0 01123456789999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc--cHHHHHHHHHHHHHHhc
Q 011049 425 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE--NVMHVIWETDRWLQKYC 483 (494)
Q Consensus 425 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~fl~~~l 483 (494)
+|..+| +..+.++.+.+.. ++++.++++++|.+.... ..+++++.+.+||+++.
T Consensus 219 ~D~i~~--~~~~~~l~~~~~~---~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 219 NNEISD--VSGAYYFMQHANC---NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred CCCcCC--hHHHHHHHHHccC---CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 999988 8888888777643 468999999999987543 36788999999999873
No 22
>PRK10749 lysophospholipase L2; Provisional
Probab=99.83 E-value=7.4e-19 Score=167.44 Aligned_cols=229 Identities=14% Similarity=0.155 Sum_probs=155.4
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
.+...+...||.++.+..+.|.. +.|+||++||.+. ........+..++++||.|+++
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~~-------~~~~vll~HG~~~---------------~~~~y~~~~~~l~~~g~~v~~~ 87 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAPH-------HDRVVVICPGRIE---------------SYVKYAELAYDLFHLGYDVLII 87 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCCC-------CCcEEEEECCccc---------------hHHHHHHHHHHHHHCCCeEEEE
Confidence 45667777899999998887642 1478999999531 1111112344678899999996
Q ss_pred CCCCCCCCCCCCCC--------chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeC
Q 011049 304 PSIPIIGEGDKLPN--------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 375 (494)
Q Consensus 304 ~~~~~~g~g~~~~~--------~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~ 375 (494)
|.+ |+|.+... ....+..++|+.++++.+.+.. +..++.++||||||.+++.++.++|++++++|+.
T Consensus 88 D~~---G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~ 162 (330)
T PRK10749 88 DHR---GQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPG--PYRKRYALAHSMGGAILTLFLQRHPGVFDAIALC 162 (330)
T ss_pred cCC---CCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcC--CCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEE
Confidence 665 45544221 1134667888888888776542 3478999999999999999999999999999999
Q ss_pred CCCCCCCCC-CCC-------------------------ccc-cccccc--ccH-------HHHHhcCc------------
Q 011049 376 SGSYNKTLT-PFG-------------------------FQT-EFRTLW--EAT-------NVYIEMSP------------ 407 (494)
Q Consensus 376 ~~~~~~~~~-~~~-------------------------~~~-~~~~~~--~~~-------~~~~~~sp------------ 407 (494)
+|....... ... +.. .....| ... +.+. .+|
T Consensus 163 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 241 (330)
T PRK10749 163 APMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYA-DDPELRVGGPTYHWV 241 (330)
T ss_pred CchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHH-hCCCcccCCCcHHHH
Confidence 886431100 000 000 000000 000 1111 111
Q ss_pred ----------cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC---CcEEEEEcCCCCCccCCccc--HHHHH
Q 011049 408 ----------ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG---ALSRLVLLPFEHHVYAAREN--VMHVI 472 (494)
Q Consensus 408 ----------~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g---~~~~~~~~~~~~H~~~~~~~--~~~~~ 472 (494)
...+.++++|+|++||++|..|+ +..++.+++.+++.+ .+.++++|++++|.+..... ...++
T Consensus 242 ~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~--~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~ 319 (330)
T PRK10749 242 RESILAGEQVLAGAGDITTPLLLLQAEEERVVD--NRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVAL 319 (330)
T ss_pred HHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeC--HHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHH
Confidence 23456788999999999999998 898999999998765 34689999999999875443 56788
Q ss_pred HHHHHHHHHh
Q 011049 473 WETDRWLQKY 482 (494)
Q Consensus 473 ~~~~~fl~~~ 482 (494)
+.+.+||+++
T Consensus 320 ~~i~~fl~~~ 329 (330)
T PRK10749 320 NAIVDFFNRH 329 (330)
T ss_pred HHHHHHHhhc
Confidence 9999999875
No 23
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.81 E-value=1.1e-17 Score=172.96 Aligned_cols=194 Identities=22% Similarity=0.230 Sum_probs=143.1
Q ss_pred hHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC--CCC------------CCcEEEEecChH
Q 011049 289 SSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG--VAD------------PSRIAVGGHSYG 354 (494)
Q Consensus 289 ~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~--~~d------------~~ri~i~G~S~G 354 (494)
...+|+.+||+|+..+.||..+..+.. ..+.....+|..++|+||..+. +.| ..||+++|.|||
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~--~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCP--TTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcC--ccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 446889999999997776654433221 2233567889999999998542 223 479999999999
Q ss_pred HHHHHHHHHhCCCceeEEEeCCCCCCCCCCC---------CCccccc---------------------cccc--------
Q 011049 355 AFMTAHLLAHAPHLFCCGIARSGSYNKTLTP---------FGFQTEF---------------------RTLW-------- 396 (494)
Q Consensus 355 G~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~---------~~~~~~~---------------------~~~~-------- 396 (494)
|++++.+|+..|..++|+|+.++++++.... .++..+. ...+
T Consensus 349 G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 428 (767)
T PRK05371 349 GTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELT 428 (767)
T ss_pred HHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhh
Confidence 9999999999889999999999987642110 0110000 0000
Q ss_pred --------ccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccH
Q 011049 397 --------EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENV 468 (494)
Q Consensus 397 --------~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~ 468 (494)
...+.|...+++.+++++++|+|++||..|.+|+ +.++.+++++|++++++.++++.++ +|........
T Consensus 429 ~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~--~~~s~~ly~aL~~~g~pkkL~l~~g-~H~~~~~~~~ 505 (767)
T PRK05371 429 AAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVK--PKQVYQWWDALPENGVPKKLFLHQG-GHVYPNNWQS 505 (767)
T ss_pred hhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCC--hHHHHHHHHHHHhcCCCeEEEEeCC-CccCCCchhH
Confidence 0112345567888899999999999999999998 8999999999999998889887766 6865544445
Q ss_pred HHHHHHHHHHHHHhcCCCC
Q 011049 469 MHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 469 ~~~~~~~~~fl~~~l~~~~ 487 (494)
.++.+.+.+||+++|++..
T Consensus 506 ~d~~e~~~~Wfd~~LkG~~ 524 (767)
T PRK05371 506 IDFRDTMNAWFTHKLLGID 524 (767)
T ss_pred HHHHHHHHHHHHhccccCC
Confidence 6788899999999998754
No 24
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.81 E-value=4.6e-19 Score=151.92 Aligned_cols=231 Identities=17% Similarity=0.160 Sum_probs=160.2
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeE
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 299 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 299 (494)
...++-.++|++.+|.+|.+|+++|... +++.|+||..||=+ ++...+. ....|+..||+
T Consensus 52 ~~ve~ydvTf~g~~g~rI~gwlvlP~~~----~~~~P~vV~fhGY~-----------g~~g~~~-----~~l~wa~~Gya 111 (321)
T COG3458 52 PRVEVYDVTFTGYGGARIKGWLVLPRHE----KGKLPAVVQFHGYG-----------GRGGEWH-----DMLHWAVAGYA 111 (321)
T ss_pred CceEEEEEEEeccCCceEEEEEEeeccc----CCccceEEEEeecc-----------CCCCCcc-----cccccccccee
Confidence 3456778999999999999999999862 35699999999832 1111121 22356899999
Q ss_pred EEeCCCCCCCCCCCC-------------------C-CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHH
Q 011049 300 VLAGPSIPIIGEGDK-------------------L-PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTA 359 (494)
Q Consensus 300 v~~~~~~~~~g~g~~-------------------~-~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~ 359 (494)
|+..+.||..+.... + .+.-+....+.|+..+++.+.+...+|.+||++.|+|.||.+++
T Consensus 112 vf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglal 191 (321)
T COG3458 112 VFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLAL 191 (321)
T ss_pred EEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhh
Confidence 999777765444211 0 11112344588999999999999999999999999999999999
Q ss_pred HHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccc------------c---HHHHHhcCccccccCCCCCEEEEecC
Q 011049 360 HLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWE------------A---TNVYIEMSPITHANKIKKPILIIHGE 424 (494)
Q Consensus 360 ~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~------------~---~~~~~~~sp~~~~~~~~~P~li~~G~ 424 (494)
.+++.. .+++++++..|........+.... ..++. . .+.+...+..+.+.++|.|+|+..|-
T Consensus 192 aaaal~-~rik~~~~~~Pfl~df~r~i~~~~--~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL 268 (321)
T COG3458 192 AAAALD-PRIKAVVADYPFLSDFPRAIELAT--EGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGL 268 (321)
T ss_pred hhhhcC-hhhhcccccccccccchhheeecc--cCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecc
Confidence 999998 588999999997653221111110 01111 1 12233345556788899999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 425 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 425 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
.|+.|| +.....++++|... .++.+||.-+|.-.. ....+++..|+...
T Consensus 269 ~D~vcp--PstqFA~yN~l~~~---K~i~iy~~~aHe~~p----~~~~~~~~~~l~~l 317 (321)
T COG3458 269 MDPVCP--PSTQFAAYNALTTS---KTIEIYPYFAHEGGP----GFQSRQQVHFLKIL 317 (321)
T ss_pred cCCCCC--ChhhHHHhhcccCC---ceEEEeeccccccCc----chhHHHHHHHHHhh
Confidence 999987 78777888877643 467788877786432 12334456666543
No 25
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.80 E-value=2.1e-17 Score=159.28 Aligned_cols=232 Identities=14% Similarity=0.110 Sum_probs=156.2
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
.....+...++..+.+.++.|.. ..+.|+||++||.+.+ ...| ...+..|+++||.|+++
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~-----~~~~~~Vl~lHG~~~~-----------~~~~----~~~a~~L~~~Gy~V~~~ 169 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAA-----GEMRGILIIIHGLNEH-----------SGRY----LHFAKQLTSCGFGVYAM 169 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCC-----CCCceEEEEECCchHH-----------HHHH----HHHHHHHHHCCCEEEEe
Confidence 45566777888899999999864 1226899999996411 1111 23455788899999996
Q ss_pred CCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC---ceeEEEeCCC
Q 011049 304 PSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH---LFCCGIARSG 377 (494)
Q Consensus 304 ~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~---~~~a~v~~~~ 377 (494)
|.+ |+|.+... ....+...+|+.++++++.... +..++.|+|||+||.+++.++. +|+ +++++|+.+|
T Consensus 170 D~r---GhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP 243 (395)
T PLN02652 170 DWI---GHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSP 243 (395)
T ss_pred CCC---CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECc
Confidence 655 55554322 1234566789999999987652 2357999999999999987664 554 7899999888
Q ss_pred CCCCCCC---------------C-CCccc---ccccccccHHHH-H-hcC----------------------ccccccCC
Q 011049 378 SYNKTLT---------------P-FGFQT---EFRTLWEATNVY-I-EMS----------------------PITHANKI 414 (494)
Q Consensus 378 ~~~~~~~---------------~-~~~~~---~~~~~~~~~~~~-~-~~s----------------------p~~~~~~~ 414 (494)
....... + +.+.. .......+++.. . ..+ ....+.++
T Consensus 244 ~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I 323 (395)
T PLN02652 244 ALRVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSV 323 (395)
T ss_pred ccccccchHHHHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccC
Confidence 7542110 0 00000 000000000000 0 001 12345678
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
++|+|++||++|..+| +.+++++++.+... ..++++|++++|.....+..+.+++.+.+||..++..
T Consensus 324 ~vPvLIi~G~~D~vvp--~~~a~~l~~~~~~~--~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 324 TVPFMVLHGTADRVTD--PLASQDLYNEAASR--HKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLDL 390 (395)
T ss_pred CCCEEEEEeCCCCCCC--HHHHHHHHHhcCCC--CceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhhc
Confidence 9999999999999998 99999998887553 3578889999999876567889999999999998863
No 26
>PRK11460 putative hydrolase; Provisional
Probab=99.80 E-value=1.1e-17 Score=150.25 Aligned_cols=129 Identities=21% Similarity=0.159 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHH
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVY 402 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (494)
.....+.+.++++.++..++++||+++|+|+||.+++.++..+|+++.++++++|.... ..
T Consensus 82 ~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~------~~------------- 142 (232)
T PRK11460 82 AIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS------LP------------- 142 (232)
T ss_pred HHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc------cc-------------
Confidence 33455666777777776788999999999999999999999999988888887774210 00
Q ss_pred HhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 403 IEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 403 ~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
.....++|+|++||++|++|| +..++++.+.|++.+.++++++|++++|.+.. +..+.+.+||.+.
T Consensus 143 -------~~~~~~~pvli~hG~~D~vvp--~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~-----~~~~~~~~~l~~~ 208 (232)
T PRK11460 143 -------ETAPTATTIHLIHGGEDPVID--VAHAVAAQEALISLGGDVTLDIVEDLGHAIDP-----RLMQFALDRLRYT 208 (232)
T ss_pred -------ccccCCCcEEEEecCCCCccC--HHHHHHHHHHHHHCCCCeEEEEECCCCCCCCH-----HHHHHHHHHHHHH
Confidence 011236899999999999998 99999999999999999999999999999863 4556667777666
Q ss_pred cC
Q 011049 483 CL 484 (494)
Q Consensus 483 l~ 484 (494)
+.
T Consensus 209 l~ 210 (232)
T PRK11460 209 VP 210 (232)
T ss_pred cc
Confidence 54
No 27
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.78 E-value=3.5e-18 Score=141.24 Aligned_cols=238 Identities=20% Similarity=0.263 Sum_probs=167.3
Q ss_pred CCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHH
Q 011049 214 HPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF 293 (494)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 293 (494)
.+.|....++.|++++++.|..++++++++-+. ..|+++++|+.. |+.. + ........+
T Consensus 44 vptP~~~n~pye~i~l~T~D~vtL~a~~~~~E~-------S~pTlLyfh~NA-----------GNmG-h--r~~i~~~fy 102 (300)
T KOG4391|consen 44 VPTPKEFNMPYERIELRTRDKVTLDAYLMLSES-------SRPTLLYFHANA-----------GNMG-H--RLPIARVFY 102 (300)
T ss_pred CCCccccCCCceEEEEEcCcceeEeeeeecccC-------CCceEEEEccCC-----------Cccc-c--hhhHHHHHH
Confidence 344555667889999999999999999998332 379999999832 1111 1 111222356
Q ss_pred HhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEE
Q 011049 294 LARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 373 (494)
Q Consensus 294 ~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v 373 (494)
.+.+..|+.+++| |||.+..... .+....|..++++||..+...|..+|+++|.|.||..|..+|+.+.+++.|+|
T Consensus 103 ~~l~mnv~ivsYR---GYG~S~Gsps-E~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~i 178 (300)
T KOG4391|consen 103 VNLKMNVLIVSYR---GYGKSEGSPS-EEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAII 178 (300)
T ss_pred HHcCceEEEEEee---ccccCCCCcc-ccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeee
Confidence 7789999996665 6776644322 24457788899999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCC--CCCCcc--cccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc
Q 011049 374 ARSGSYNKTL--TPFGFQ--TEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL 449 (494)
Q Consensus 374 ~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~ 449 (494)
...-+..... .+.-+. ...-..|-... ..+....+.+.+.|.|++.|.+|..|| +.+.+++++..-...+
T Consensus 179 vENTF~SIp~~~i~~v~p~~~k~i~~lc~kn---~~~S~~ki~~~~~P~LFiSGlkDelVP--P~~Mr~Ly~~c~S~~K- 252 (300)
T KOG4391|consen 179 VENTFLSIPHMAIPLVFPFPMKYIPLLCYKN---KWLSYRKIGQCRMPFLFISGLKDELVP--PVMMRQLYELCPSRTK- 252 (300)
T ss_pred eechhccchhhhhheeccchhhHHHHHHHHh---hhcchhhhccccCceEEeecCccccCC--cHHHHHHHHhCchhhh-
Confidence 8776544211 111010 00001110111 122333455667999999999999998 8999999998876554
Q ss_pred EEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 450 SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 450 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
++..||++.|+-.. -..-+++.+.+||.+.-..
T Consensus 253 -rl~eFP~gtHNDT~--i~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 253 -RLAEFPDGTHNDTW--ICDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred -hheeCCCCccCceE--EeccHHHHHHHHHHHhccC
Confidence 78999999997432 1236788899999887653
No 28
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.77 E-value=3.9e-18 Score=147.77 Aligned_cols=206 Identities=19% Similarity=0.220 Sum_probs=136.4
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCC-cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH--hCCeEEEeCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPL-PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL--ARRFAVLAGPSIPI 308 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~-P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~G~~v~~~~~~~~ 308 (494)
.-|.++.+.+|.|+++++.++ + |+|+|+||+|....+...++.++.. +..++ +-++-|++|.+-..
T Consensus 169 ~tgneLkYrly~Pkdy~pdkk--y~PLvlfLHgagq~g~dn~~~l~sg~g---------aiawa~pedqcfVlAPQy~~i 237 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKK--YYPLVLFLHGAGQGGSDNDKVLSSGIG---------AIAWAGPEDQCFVLAPQYNPI 237 (387)
T ss_pred ccCceeeEEEecccccCCCCc--cccEEEEEecCCCCCchhhhhhhcCcc---------ceeeecccCceEEEccccccc
Confidence 467899999999999999887 5 9999999987443222222211110 00111 23455666443221
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHH-HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCC
Q 011049 309 IGEGDKLPNDRFVEQLVSSAEAAVE-EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFG 387 (494)
Q Consensus 309 ~g~g~~~~~~~~~~~~~~d~~~~v~-~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~ 387 (494)
.-..+ . +. .........+++ -|.++..||.+||.++|.|+||++++.++.++|+.|+|++.++|-.+.
T Consensus 238 f~d~e--~--~t-~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~------ 306 (387)
T COG4099 238 FADSE--E--KT-LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR------ 306 (387)
T ss_pred ccccc--c--cc-chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch------
Confidence 11111 1 11 112233344444 777888999999999999999999999999999999999999985442
Q ss_pred cccccccccccHHHHHhcCccccccCC-CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcC---CCCCccC
Q 011049 388 FQTEFRTLWEATNVYIEMSPITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP---FEHHVYA 463 (494)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~sp~~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~---~~~H~~~ 463 (494)
..++..+ +.|+.++|+.+|..+| .++++-+++.|+..+.++.+..|. -.-|++.
T Consensus 307 --------------------v~lv~~lk~~piWvfhs~dDkv~P--v~nSrv~y~~lk~~~~kv~Ytaf~~g~~~~eG~d 364 (387)
T COG4099 307 --------------------VYLVRTLKKAPIWVFHSSDDKVIP--VSNSRVLYERLKALDRKVNYTAFLEGTTVLEGVD 364 (387)
T ss_pred --------------------hhhhhhhccCceEEEEecCCCccc--cCcceeehHHHHhhccccchhhhhhccccccccC
Confidence 1122223 4899999999999998 999999999999998888777665 2234433
Q ss_pred CcccHH--HHHHHHHHHHHH
Q 011049 464 ARENVM--HVIWETDRWLQK 481 (494)
Q Consensus 464 ~~~~~~--~~~~~~~~fl~~ 481 (494)
....+. .-..++.+||-+
T Consensus 365 ~~g~w~atyn~~eaieWLl~ 384 (387)
T COG4099 365 HSGVWWATYNDAEAIEWLLK 384 (387)
T ss_pred CCCcceeecCCHHHHHHHHh
Confidence 222221 223466777754
No 29
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.77 E-value=1.2e-17 Score=148.61 Aligned_cols=189 Identities=18% Similarity=0.133 Sum_probs=117.8
Q ss_pred EEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCC--C
Q 011049 239 ATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL--P 316 (494)
Q Consensus 239 ~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~--~ 316 (494)
+++|+|++.. +++|+||++||++.... .+... ..+...+.+.||+|++++.++..+.+..+ .
T Consensus 1 ~~ly~P~~~~----~~~P~vv~lHG~~~~~~-----------~~~~~-~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~ 64 (212)
T TIGR01840 1 MYVYVPAGLT----GPRALVLALHGCGQTAS-----------AYVID-WGWKAAADRYGFVLVAPEQTSYNSSNNCWDWF 64 (212)
T ss_pred CEEEcCCCCC----CCCCEEEEeCCCCCCHH-----------HHhhh-cChHHHHHhCCeEEEecCCcCccccCCCCCCC
Confidence 4789998752 34899999999763221 11100 01222334589999998876543221110 0
Q ss_pred Cc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC-Cccccc
Q 011049 317 ND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF-GFQTEF 392 (494)
Q Consensus 317 ~~---~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~-~~~~~~ 392 (494)
.. ........|+..+++++.++..+|++||+|+|+|+||++++.++..+|++|++++++++......... ......
T Consensus 65 ~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~ 144 (212)
T TIGR01840 65 FTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQM 144 (212)
T ss_pred CccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhc
Confidence 00 01123467788899999988789999999999999999999999999999999999887532110000 000000
Q ss_pred ccccccHHHHHhc-Cc-cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhC
Q 011049 393 RTLWEATNVYIEM-SP-ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGH 446 (494)
Q Consensus 393 ~~~~~~~~~~~~~-sp-~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~ 446 (494)
..-.....+.+. .. .....+...|++++||++|.+|| +..+++++++|++.
T Consensus 145 -~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp--~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 145 -CTAATAASVCRLVRGMQSEYNGPTPIMSVVHGDADYTVL--PGNADEIRDAMLKV 197 (212)
T ss_pred -CCCCCHHHHHHHHhccCCcccCCCCeEEEEEcCCCceeC--cchHHHHHHHHHHh
Confidence 000011111110 00 11122234567899999999998 99999999999985
No 30
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.77 E-value=8.3e-18 Score=140.35 Aligned_cols=198 Identities=18% Similarity=0.156 Sum_probs=142.5
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCC--CCCchhHHHHHHHHHHHHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK--LPNDRFVEQLVSSAEAAVE 333 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~--~~~~~~~~~~~~d~~~~v~ 333 (494)
-.|+++|| ++|++..+. .....|.++||.|.+|++. |+|.. ..-....++..+|+.++.+
T Consensus 16 ~AVLllHG-----------FTGt~~Dvr----~Lgr~L~e~GyTv~aP~yp---GHG~~~e~fl~t~~~DW~~~v~d~Y~ 77 (243)
T COG1647 16 RAVLLLHG-----------FTGTPRDVR----MLGRYLNENGYTVYAPRYP---GHGTLPEDFLKTTPRDWWEDVEDGYR 77 (243)
T ss_pred EEEEEEec-----------cCCCcHHHH----HHHHHHHHCCceEecCCCC---CCCCCHHHHhcCCHHHHHHHHHHHHH
Confidence 68999998 445554443 3556788899999997764 44433 1112234667889999999
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcc----------c-ccc---------
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ----------T-EFR--------- 393 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~----------~-~~~--------- 393 (494)
+|.+.++ +.|+|.|.||||.+|+.++.++| .+++|.+|+..+......-+. . +..
T Consensus 78 ~L~~~gy---~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~ 152 (243)
T COG1647 78 DLKEAGY---DEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEM 152 (243)
T ss_pred HHHHcCC---CeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHH
Confidence 9999987 78999999999999999999997 688888877665221110000 0 000
Q ss_pred -----cccccHHHHHh--cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc
Q 011049 394 -----TLWEATNVYIE--MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE 466 (494)
Q Consensus 394 -----~~~~~~~~~~~--~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 466 (494)
++|.....+.. ......++.|..|+|+++|.+|+.|| .+.+..++..+... +.++.+|.+.||.+....
T Consensus 153 ~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~--~~sA~~Iy~~v~s~--~KeL~~~e~SgHVIt~D~ 228 (243)
T COG1647 153 KSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVP--AESANFIYDHVESD--DKELKWLEGSGHVITLDK 228 (243)
T ss_pred HHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCC--HHHHHHHHHhccCC--cceeEEEccCCceeecch
Confidence 01111111111 12345678899999999999999998 88888888888764 458999999999999888
Q ss_pred cHHHHHHHHHHHHH
Q 011049 467 NVMHVIWETDRWLQ 480 (494)
Q Consensus 467 ~~~~~~~~~~~fl~ 480 (494)
.++.+.+.++.||+
T Consensus 229 Erd~v~e~V~~FL~ 242 (243)
T COG1647 229 ERDQVEEDVITFLE 242 (243)
T ss_pred hHHHHHHHHHHHhh
Confidence 88899999999996
No 31
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.76 E-value=3.1e-17 Score=141.45 Aligned_cols=221 Identities=19% Similarity=0.169 Sum_probs=155.3
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEE
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~ 301 (494)
..+.+..+++.|..+....+.|+.. ..++|++.||--. . ... .......|.. ..+.|+
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~------~~~~lly~hGNa~-------D-------lgq-~~~~~~~l~~~ln~nv~ 92 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEA------AHPTLLYSHGNAA-------D-------LGQ-MVELFKELSIFLNCNVV 92 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccc------cceEEEEcCCccc-------c-------hHH-HHHHHHHHhhcccceEE
Confidence 4667777888888999988888753 2689999998310 0 000 0112223333 589999
Q ss_pred eCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC
Q 011049 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~ 381 (494)
..|+ .|+|.+.....- ....+|+.++.+||++... .+++|+++|+|+|...++.+|++.| .+++|+.+|+.+.
T Consensus 93 ~~DY---SGyG~S~G~psE-~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 93 SYDY---SGYGRSSGKPSE-RNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSG 165 (258)
T ss_pred EEec---ccccccCCCccc-ccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhh
Confidence 9554 466665433221 2568999999999999876 7799999999999999999999997 8999999998763
Q ss_pred CCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc
Q 011049 382 TLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461 (494)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 461 (494)
.-.-.. ......|- ....-+..+..+++|+|++||++|++|| ..+..++++..++. ++..+..|++|.
T Consensus 166 ~rv~~~--~~~~~~~~-----d~f~~i~kI~~i~~PVLiiHgtdDevv~--~sHg~~Lye~~k~~---~epl~v~g~gH~ 233 (258)
T KOG1552|consen 166 MRVAFP--DTKTTYCF-----DAFPNIEKISKITCPVLIIHGTDDEVVD--FSHGKALYERCKEK---VEPLWVKGAGHN 233 (258)
T ss_pred hhhhcc--CcceEEee-----ccccccCcceeccCCEEEEecccCceec--ccccHHHHHhcccc---CCCcEEecCCCc
Confidence 211110 00011110 1112256677788999999999999998 99999999999865 677788899997
Q ss_pred cCCcccHHHHHHHHHHHHHHhcCC
Q 011049 462 YAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 462 ~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
-. +...++...+..|+..-++.
T Consensus 234 ~~--~~~~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 234 DI--ELYPEYIEHLRRFISSVLPS 255 (258)
T ss_pred cc--ccCHHHHHHHHHHHHHhccc
Confidence 54 33346777888888766543
No 32
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.76 E-value=9.8e-17 Score=151.80 Aligned_cols=225 Identities=18% Similarity=0.162 Sum_probs=151.4
Q ss_pred EcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCC
Q 011049 230 QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII 309 (494)
Q Consensus 230 ~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~ 309 (494)
....+..+++.+|.|.. ....+.|+||++|||+|..++ ...+. ......++..|+.|+.++|+-..
T Consensus 57 ~~~~~~~~~~~~y~p~~---~~~~~~p~vly~HGGg~~~g~--------~~~~~---~~~~~~~~~~g~~vv~vdYrlaP 122 (312)
T COG0657 57 AGPSGDGVPVRVYRPDR---KAAATAPVVLYLHGGGWVLGS--------LRTHD---ALVARLAAAAGAVVVSVDYRLAP 122 (312)
T ss_pred cCCCCCceeEEEECCCC---CCCCCCcEEEEEeCCeeeecC--------hhhhH---HHHHHHHHHcCCEEEecCCCCCC
Confidence 33455668899999921 223348999999999875433 22221 12334556799999999987543
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhCCC----ceeEEEeCCCCCCCC
Q 011049 310 GEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCGIARSGSYNKT 382 (494)
Q Consensus 310 g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~p~----~~~a~v~~~~~~~~~ 382 (494)
.+ . ....++|+.+++.|+.++. .+|+++|+|+|+|.||++++.++..-.+ ..++.+.++|+.+..
T Consensus 123 e~-------~-~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 123 EH-------P-FPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred CC-------C-CCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 32 1 2345778889999998773 4899999999999999999998876543 468889999988765
Q ss_pred CCCCCcccccccccc--------cHHHH---------HhcCccccc--cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHH
Q 011049 383 LTPFGFQTEFRTLWE--------ATNVY---------IEMSPITHA--NKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 443 (494)
Q Consensus 383 ~~~~~~~~~~~~~~~--------~~~~~---------~~~sp~~~~--~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l 443 (494)
.....+.......+- ....| ...+|+... .. -.|+++++|+.|.+ ..+++.+.++|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l----~~~~~~~a~~L 269 (312)
T COG0657 195 SSAASLPGYGEADLLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPL----RDEGEAYAERL 269 (312)
T ss_pred ccccchhhcCCccccCHHHHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcc----hhHHHHHHHHH
Confidence 311111110000000 00001 123444333 22 47899999999998 45899999999
Q ss_pred HhCCCcEEEEEcCCCCCccCCcc--cHHHHHHHHHHHHHH
Q 011049 444 KGHGALSRLVLLPFEHHVYAARE--NVMHVIWETDRWLQK 481 (494)
Q Consensus 444 ~~~g~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~fl~~ 481 (494)
++.|+++++..+++..|+|.... .....+.++.+|+..
T Consensus 270 ~~agv~~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 270 RAAGVPVELRVYPGMIHGFDLLTGPEARSALRQIAAFLRA 309 (312)
T ss_pred HHcCCeEEEEEeCCcceeccccCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999884322 233456677777763
No 33
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.75 E-value=5.4e-17 Score=164.77 Aligned_cols=231 Identities=19% Similarity=0.260 Sum_probs=148.0
Q ss_pred EcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCC
Q 011049 230 QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII 309 (494)
Q Consensus 230 ~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~ 309 (494)
++.||.+|.+.+++|++ .++.|+||++||-+..... ...........|+++||+|+.++.||.
T Consensus 2 ~~~DG~~L~~~~~~P~~-----~~~~P~Il~~~gyg~~~~~-----------~~~~~~~~~~~l~~~Gy~vv~~D~RG~- 64 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAG-----GGPVPVILSRTPYGKDAGL-----------RWGLDKTEPAWFVAQGYAVVIQDTRGR- 64 (550)
T ss_pred cCCCCCEEEEEEEecCC-----CCCCCEEEEecCCCCchhh-----------ccccccccHHHHHhCCcEEEEEecccc-
Confidence 56799999999999975 2348999999985421100 000111234578999999999777654
Q ss_pred CCCCCCCCchhH-HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC---C
Q 011049 310 GEGDKLPNDRFV-EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT---P 385 (494)
Q Consensus 310 g~g~~~~~~~~~-~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~---~ 385 (494)
|.+....... ....+|+.++++|+.++.+.+ .||+++|+||||++++.++..+|+.++|+|+.++..+.... .
T Consensus 65 --g~S~g~~~~~~~~~~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~~~~~~ 141 (550)
T TIGR00976 65 --GASEGEFDLLGSDEAADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYRDIAFP 141 (550)
T ss_pred --ccCCCceEecCcccchHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhHhhccC
Confidence 4443221112 456889999999999998766 69999999999999999999999999999998887663210 0
Q ss_pred CCcccc-------------cc----c---cc----------ccH-------------------------------HHHHh
Q 011049 386 FGFQTE-------------FR----T---LW----------EAT-------------------------------NVYIE 404 (494)
Q Consensus 386 ~~~~~~-------------~~----~---~~----------~~~-------------------------------~~~~~ 404 (494)
-.+... .. . .+ ... +.+..
T Consensus 142 g~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 221 (550)
T TIGR00976 142 GALRLDVLLGWWALLATDSMRPRADDRPPRYAAAARLAQSYDDCQTALSHTPRSSVLALDRFIGWWIQVVDDDYDESWVS 221 (550)
T ss_pred CeeccchhHHHHHhhccccccccccccccchHHHHHHhhhhhhHHHHHhcCCccccccccccchhhhhccCCCCChhhcc
Confidence 000000 00 0 00 000 01111
Q ss_pred cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC---------CcccHHHHHH--
Q 011049 405 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA---------ARENVMHVIW-- 473 (494)
Q Consensus 405 ~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~---------~~~~~~~~~~-- 473 (494)
.+....++++++|+|++.|-.|.. ...+.+.++.+.+.+ +.++++=|. .|... .... .....
T Consensus 222 ~~~~~~~~~i~vP~l~~~gw~D~~----~~g~~~~~~~~~~~~-~~~lilGpw-~H~~~~~~~~~~~~g~~~-~~~~~~~ 294 (550)
T TIGR00976 222 ISLWRDLGGSDVPTLVTGGWYDNH----SRGSIRLFLAVHRGG-AQRLVVGPW-THSGLGGRVGDGNYGMAA-LSWVDEA 294 (550)
T ss_pred CchhhHhcCCCCCEEEeCcccCCC----CchHHHHHHHHhhcC-CceEEEccC-CCCCcccccCCCccCccc-cccchhh
Confidence 222335667899999999999953 456677778877654 456665444 57511 1111 11122
Q ss_pred HHHHHHHHhcCCCC
Q 011049 474 ETDRWLQKYCLSNT 487 (494)
Q Consensus 474 ~~~~fl~~~l~~~~ 487 (494)
.+++||++||++..
T Consensus 295 ~~~~wfD~~Lkg~~ 308 (550)
T TIGR00976 295 EQLAFFDRHLKGGT 308 (550)
T ss_pred hhHHHHHHHhCCCC
Confidence 46899999999754
No 34
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.74 E-value=5.9e-16 Score=143.54 Aligned_cols=232 Identities=19% Similarity=0.187 Sum_probs=156.1
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
..+-.+.+.||..+....+.+... +..+||++||.+. +.......+..|..+||.|++
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~~------~~g~Vvl~HG~~E---------------h~~ry~~la~~l~~~G~~V~~- 66 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPEP------PKGVVVLVHGLGE---------------HSGRYEELADDLAARGFDVYA- 66 (298)
T ss_pred cccceeecCCCceEEEEeecCCCC------CCcEEEEecCchH---------------HHHHHHHHHHHHHhCCCEEEE-
Confidence 344567778999999999988741 1379999999642 222223456788999999999
Q ss_pred CCCCCCCCCCCC-CC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 304 PSIPIIGEGDKL-PN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 304 ~~~~~~g~g~~~-~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
.+.+|+|.+. .. ...+.+.+.|+...++.+.... -..+++++||||||.+++.++.+++..++++|+.+|++
T Consensus 67 --~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~--~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~ 142 (298)
T COG2267 67 --LDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPD--PGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPAL 142 (298)
T ss_pred --ecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccC--CCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccc
Confidence 4455666663 11 1224566777777777776541 13689999999999999999999999999999999987
Q ss_pred CCCC--C-----------------CCCccc----cccccc--ccHH--HHHhcCc-----------------------cc
Q 011049 380 NKTL--T-----------------PFGFQT----EFRTLW--EATN--VYIEMSP-----------------------IT 409 (494)
Q Consensus 380 ~~~~--~-----------------~~~~~~----~~~~~~--~~~~--~~~~~sp-----------------------~~ 409 (494)
.... . .+.+.. .....| .+++ .....+| ..
T Consensus 143 ~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~ 222 (298)
T COG2267 143 GLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALR 222 (298)
T ss_pred cCChhHHHHHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchh
Confidence 6431 0 011111 000000 0110 0111122 11
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc-EEEEEcCCCCCccCCcccH--HHHHHHHHHHHHHhcCC
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL-SRLVLLPFEHHVYAARENV--MHVIWETDRWLQKYCLS 485 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~-~~~~~~~~~~H~~~~~~~~--~~~~~~~~~fl~~~l~~ 485 (494)
...++++|+|+++|++|.+|+ . .....+.+++.+.+ .++.+|+|+.|.+...... +.+++.+.+||.+++..
T Consensus 223 ~~~~~~~PvLll~g~~D~vv~--~--~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 223 DAPAIALPVLLLQGGDDRVVD--N--VEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALPS 297 (298)
T ss_pred ccccccCCEEEEecCCCcccc--C--cHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhccC
Confidence 245678999999999999975 3 33444444555544 6999999999998877776 88999999999988753
No 35
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.73 E-value=3.6e-16 Score=151.96 Aligned_cols=151 Identities=12% Similarity=0.043 Sum_probs=121.0
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++|+ .+++.++||..+.....|.|||||+.|+|....++ +.+||+++++++ +.++||...+.+ .
T Consensus 212 ~~~Iyv~dl---~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g-~~~Iy~~dl~~g--~~~~LT~~~~~d-----~ 280 (419)
T PRK04043 212 KPTLYKYNL---YTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKG-QPDIYLYDTNTK--TLTQITNYPGID-----V 280 (419)
T ss_pred CCEEEEEEC---CCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCC-CcEEEEEECCCC--cEEEcccCCCcc-----C
Confidence 458999999 89999999987777778999999999999987766 789999999988 889999876543 4
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.+.. ...++||++|+++|+.++++..... ...|
T Consensus 281 ~p~--~SPDG~~I~F~Sdr------------------~g~~~Iy~~dl~~g~~~rlt~~g~~--------------~~~~ 326 (419)
T PRK04043 281 NGN--FVEDDKRIVFVSDR------------------LGYPNIFMKKLNSGSVEQVVFHGKN--------------NSSV 326 (419)
T ss_pred ccE--ECCCCCEEEEEECC------------------CCCceEEEEECCCCCeEeCccCCCc--------------CceE
Confidence 455 99999999999732 2235799999999998887653211 2379
Q ss_pred cccCcEEEEEEecCC-----CCCeEEEEEcCCCceeEeecC
Q 011049 177 NLNQLKILTSKESKT-----EITQYHILSWPLKKSSQITNF 212 (494)
Q Consensus 177 s~d~~~~~~~~~s~~-----~p~~l~~~~~~~~~~~~lt~~ 212 (494)
||||+.++++..... ...+||++++++++.++|+..
T Consensus 327 SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~LT~~ 367 (419)
T PRK04043 327 STYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRLTAN 367 (419)
T ss_pred CCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEECCCC
Confidence 999999999875432 235899999999998888863
No 36
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.71 E-value=1.8e-16 Score=148.28 Aligned_cols=226 Identities=19% Similarity=0.217 Sum_probs=131.5
Q ss_pred ccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchh-HHHHHhCCeE
Q 011049 221 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTS-SLIFLARRFA 299 (494)
Q Consensus 221 ~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~G~~ 299 (494)
....++++++-. |.+|++++.+|++ .+|+|+||++-|. +.+..-.... ...|+.+|++
T Consensus 162 ~~~i~~v~iP~e-g~~I~g~LhlP~~-----~~p~P~VIv~gGl---------------Ds~qeD~~~l~~~~l~~rGiA 220 (411)
T PF06500_consen 162 DYPIEEVEIPFE-GKTIPGYLHLPSG-----EKPYPTVIVCGGL---------------DSLQEDLYRLFRDYLAPRGIA 220 (411)
T ss_dssp SSEEEEEEEEET-TCEEEEEEEESSS-----SS-EEEEEEE--T---------------TS-GGGGHHHHHCCCHHCT-E
T ss_pred CCCcEEEEEeeC-CcEEEEEEEcCCC-----CCCCCEEEEeCCc---------------chhHHHHHHHHHHHHHhCCCE
Confidence 456889999854 5899999999984 3458999987552 1121111111 1246789999
Q ss_pred EEeCCCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 300 VLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 300 v~~~~~~~~~g~g~~~~~-~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
+++.+. ++.|+.....- .+. +.. ..++++||.+.++||.+||+++|.|+||+.+..+|..++++++++|+..|+
T Consensus 221 ~LtvDm-PG~G~s~~~~l~~D~-~~l---~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~ 295 (411)
T PF06500_consen 221 MLTVDM-PGQGESPKWPLTQDS-SRL---HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAP 295 (411)
T ss_dssp EEEE---TTSGGGTTT-S-S-C-CHH---HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES--
T ss_pred EEEEcc-CCCcccccCCCCcCH-HHH---HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCch
Confidence 999554 33333221111 111 111 347789999999999999999999999999999998888999999999987
Q ss_pred CCCCCCCCCcccc------------cccccccH----HHHHhcCccc--cc--cCCCCCEEEEecCCCCCCCCCHHHHHH
Q 011049 379 YNKTLTPFGFQTE------------FRTLWEAT----NVYIEMSPIT--HA--NKIKKPILIIHGEVDDKVGLFPMQAER 438 (494)
Q Consensus 379 ~~~~~~~~~~~~~------------~~~~~~~~----~~~~~~sp~~--~~--~~~~~P~li~~G~~D~~v~~~~~~~~~ 438 (494)
++..+........ .+..-.+. ..+...|... .+ .+.++|+|.+.|++|+++| .++++.
T Consensus 296 vh~~ft~~~~~~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P--~eD~~l 373 (411)
T PF06500_consen 296 VHHFFTDPEWQQRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSP--IEDSRL 373 (411)
T ss_dssp -SCGGH-HHHHTTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS---HHHHHH
T ss_pred HhhhhccHHHHhcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCC--HHHHHH
Confidence 6643321110000 00000011 1123344433 23 5567999999999999987 777644
Q ss_pred HHHHHHhCCCcEEEEEcCCCC-CccCCcccHHHHHHHHHHHHHHhc
Q 011049 439 FFDALKGHGALSRLVLLPFEH-HVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 439 ~~~~l~~~g~~~~~~~~~~~~-H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
++. .+.+-+...++... | ......+..+.+||++.|
T Consensus 374 ia~----~s~~gk~~~~~~~~~~-----~gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 374 IAE----SSTDGKALRIPSKPLH-----MGYPQALDEIYKWLEDKL 410 (411)
T ss_dssp HHH----TBTT-EEEEE-SSSHH-----HHHHHHHHHHHHHHHHHH
T ss_pred HHh----cCCCCceeecCCCccc-----cchHHHHHHHHHHHHHhc
Confidence 333 33334555555433 3 334578889999999875
No 37
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.70 E-value=1.4e-15 Score=135.51 Aligned_cols=132 Identities=30% Similarity=0.346 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHH
Q 011049 322 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNV 401 (494)
Q Consensus 322 ~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (494)
....+-+.+.++...+.+ ++++||+++|+|.||.+++.++.++|+.+.++|+++|.......
T Consensus 84 ~~s~~~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~----------------- 145 (216)
T PF02230_consen 84 EESAERLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE----------------- 145 (216)
T ss_dssp HHHHHHHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC-----------------
T ss_pred HHHHHHHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc-----------------
Confidence 334455566666666665 89999999999999999999999999999999999986431100
Q ss_pred HHhcCccccccCC-CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 402 YIEMSPITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 402 ~~~~sp~~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
........ ++|++++||..|++|| ...+++..+.|++.+.++++..|++.+|.+.. +.+..+.+||.
T Consensus 146 -----~~~~~~~~~~~pi~~~hG~~D~vvp--~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~-----~~~~~~~~~l~ 213 (216)
T PF02230_consen 146 -----LEDRPEALAKTPILIIHGDEDPVVP--FEWAEKTAEFLKAAGANVEFHEYPGGGHEISP-----EELRDLREFLE 213 (216)
T ss_dssp -----CHCCHCCCCTS-EEEEEETT-SSST--HHHHHHHHHHHHCTT-GEEEEEETT-SSS--H-----HHHHHHHHHHH
T ss_pred -----ccccccccCCCcEEEEecCCCCccc--HHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCH-----HHHHHHHHHHh
Confidence 00011111 6899999999999998 99999999999999999999999999998763 66788999999
Q ss_pred Hhc
Q 011049 481 KYC 483 (494)
Q Consensus 481 ~~l 483 (494)
+++
T Consensus 214 ~~~ 216 (216)
T PF02230_consen 214 KHI 216 (216)
T ss_dssp HH-
T ss_pred hhC
Confidence 874
No 38
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.70 E-value=6.9e-17 Score=148.10 Aligned_cols=154 Identities=18% Similarity=0.244 Sum_probs=93.3
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcc---cCCCCccCCCCchhHHHHHhC
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQV---RGSPNEFSGMTPTSSLIFLAR 296 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~ 296 (494)
..+..|.+.|.+.++..++++++.|++. ++|.|+||.+||.+...-.-.+.. ......+..........|+.+
T Consensus 84 dGY~~EKv~f~~~p~~~vpaylLvPd~~----~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~ 159 (390)
T PF12715_consen 84 DGYTREKVEFNTTPGSRVPAYLLVPDGA----KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKR 159 (390)
T ss_dssp TTEEEEEEEE--STTB-EEEEEEEETT------S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTT
T ss_pred CCeEEEEEEEEccCCeeEEEEEEecCCC----CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhC
Confidence 4567899999999999999999999974 467999999998754321100000 000011222223456789999
Q ss_pred CeEEEeCCCCCCCCCCCCCC-------------------CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHH
Q 011049 297 RFAVLAGPSIPIIGEGDKLP-------------------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFM 357 (494)
Q Consensus 297 G~~v~~~~~~~~~g~g~~~~-------------------~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~ 357 (494)
||+|+++|..+...++.... +..+......|.+.++|||.+++.||++||+++|+|+||+.
T Consensus 160 GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~ 239 (390)
T PF12715_consen 160 GYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYR 239 (390)
T ss_dssp TSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHH
T ss_pred CCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHH
Confidence 99999977654322222110 01112223556678999999999999999999999999999
Q ss_pred HHHHHHhCCCceeEEEeCCCC
Q 011049 358 TAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 358 a~~~~~~~p~~~~a~v~~~~~ 378 (494)
++++++.. ++++++|+.+-+
T Consensus 240 a~~LaALD-dRIka~v~~~~l 259 (390)
T PF12715_consen 240 AWWLAALD-DRIKATVANGYL 259 (390)
T ss_dssp HHHHHHH--TT--EEEEES-B
T ss_pred HHHHHHcc-hhhHhHhhhhhh
Confidence 99999998 788888865443
No 39
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.70 E-value=3.7e-16 Score=144.53 Aligned_cols=213 Identities=24% Similarity=0.307 Sum_probs=133.8
Q ss_pred CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCC
Q 011049 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 312 (494)
Q Consensus 233 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 312 (494)
||++|.+.+|+| +.. ..+++|+||..|+-+.... ..................|+++||+|+..+.||. |
T Consensus 1 DGv~L~adv~~P-~~~--~~~~~P~il~~tpY~~~~~-----~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~---g 69 (272)
T PF02129_consen 1 DGVRLAADVYRP-GAD--GGGPFPVILTRTPYGKGDQ-----TASDLAGANPGPPSARRPFAERGYAVVVQDVRGT---G 69 (272)
T ss_dssp TS-EEEEEEEEE---T--TSSSEEEEEEEESSTCTC------HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTS---T
T ss_pred CCCEEEEEEEec-CCC--CCCcccEEEEccCcCCCCC-----cccchhhhhcccchhHHHHHhCCCEEEEECCccc---c
Confidence 799999999999 322 2456999999986321000 0000000000000011238999999999777654 4
Q ss_pred CCCCCchh-HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-C--CCc
Q 011049 313 DKLPNDRF-VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-P--FGF 388 (494)
Q Consensus 313 ~~~~~~~~-~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~-~--~~~ 388 (494)
.+...... ......|..++|+|+.++++.+ .||+++|.||+|+.++.+|+..|..+||+++..+..|.... . -+.
T Consensus 70 ~S~G~~~~~~~~e~~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~ 148 (272)
T PF02129_consen 70 GSEGEFDPMSPNEAQDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGA 148 (272)
T ss_dssp TS-S-B-TTSHHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTE
T ss_pred cCCCccccCChhHHHHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCc
Confidence 34333222 5667899999999999998755 69999999999999999999888899999999888774431 0 000
Q ss_pred ccc-ccccc----------------------------------------------------ccHHHHHhcCccccccCCC
Q 011049 389 QTE-FRTLW----------------------------------------------------EATNVYIEMSPITHANKIK 415 (494)
Q Consensus 389 ~~~-~~~~~----------------------------------------------------~~~~~~~~~sp~~~~~~~~ 415 (494)
... ....| ...+.+.+.++...+.+++
T Consensus 149 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~ 228 (272)
T PF02129_consen 149 FRLGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKID 228 (272)
T ss_dssp EBCCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--
T ss_pred ccccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCC
Confidence 000 00000 0112334445555678999
Q ss_pred CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC-CcEEEEEcCCCCCc
Q 011049 416 KPILIIHGEVDDKVGLFPMQAERFFDALKGHG-ALSRLVLLPFEHHV 461 (494)
Q Consensus 416 ~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~ 461 (494)
+|+|+++|..|... ...+.+.+++|++.+ ++.++++-|. +|.
T Consensus 229 vP~l~v~Gw~D~~~---~~~~~~~~~~l~~~~~~~~~Liigpw-~H~ 271 (272)
T PF02129_consen 229 VPVLIVGGWYDTLF---LRGALRAYEALRAPGSKPQRLIIGPW-THG 271 (272)
T ss_dssp SEEEEEEETTCSST---SHHHHHHHHHHCTTSTC-EEEEEESE-STT
T ss_pred CCEEEecccCCccc---chHHHHHHHHhhcCCCCCCEEEEeCC-CCC
Confidence 99999999999765 478899999999988 7778888776 564
No 40
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.69 E-value=1.2e-16 Score=142.51 Aligned_cols=181 Identities=20% Similarity=0.153 Sum_probs=121.3
Q ss_pred EEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 011049 258 LFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVV 336 (494)
Q Consensus 258 vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~ 336 (494)
||++|||+|..+.... . ......+++ +|++|+.++|+-... . .....++|+.++++|+.
T Consensus 1 v~~~HGGg~~~g~~~~--------~----~~~~~~la~~~g~~v~~~~Yrl~p~-------~-~~p~~~~D~~~a~~~l~ 60 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES--------H----WPFAARLAAERGFVVVSIDYRLAPE-------A-PFPAALEDVKAAYRWLL 60 (211)
T ss_dssp EEEE--STTTSCGTTT--------H----HHHHHHHHHHHTSEEEEEE---TTT-------S-STTHHHHHHHHHHHHHH
T ss_pred CEEECCcccccCChHH--------H----HHHHHHHHhhccEEEEEeecccccc-------c-cccccccccccceeeec
Confidence 7899999976543221 1 234445665 999999988864321 1 22467899999999999
Q ss_pred Hc---CCCCCCcEEEEecChHHHHHHHHHHhCCC----ceeEEEeCCCCCCC-CCCCCCcc----ccccccccc------
Q 011049 337 RR---GVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCGIARSGSYNK-TLTPFGFQ----TEFRTLWEA------ 398 (494)
Q Consensus 337 ~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~p~----~~~a~v~~~~~~~~-~~~~~~~~----~~~~~~~~~------ 398 (494)
++ ..+|+++|+|+|+|.||.+++.++....+ .++++++++|+.+. ........ ......+..
T Consensus 61 ~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (211)
T PF07859_consen 61 KNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWF 140 (211)
T ss_dssp HTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHH
T ss_pred cccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccc
Confidence 97 24789999999999999999999875433 48999999998765 21111110 000001100
Q ss_pred HHHH--------HhcCccccccCC--CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC
Q 011049 399 TNVY--------IEMSPITHANKI--KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 399 ~~~~--------~~~sp~~~~~~~--~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 463 (494)
.+.| ...+|+.. ..+ -+|+++++|+.|.. ..++..++++|++.|++++++++++..|.|.
T Consensus 141 ~~~~~~~~~~~~~~~sp~~~-~~~~~~Pp~~i~~g~~D~l----~~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 141 WKLYLPGSDRDDPLASPLNA-SDLKGLPPTLIIHGEDDVL----VDDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp HHHHHSTGGTTSTTTSGGGS-SCCTTCHEEEEEEETTSTT----HHHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred cccccccccccccccccccc-cccccCCCeeeeccccccc----hHHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 0111 12455554 123 36899999999986 6788999999999999999999999999874
No 41
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.69 E-value=2.2e-15 Score=139.48 Aligned_cols=229 Identities=14% Similarity=0.070 Sum_probs=140.7
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
+.+.|. .+|.++.++++.|.+. + .+.||++|||+... .+. +. .....+..|+++||.|+++|
T Consensus 3 ~~~~~~-~~~~~l~g~~~~p~~~---~---~~~vv~i~gg~~~~-------~g~---~~-~~~~la~~l~~~G~~v~~~D 64 (274)
T TIGR03100 3 RALTFS-CEGETLVGVLHIPGAS---H---TTGVLIVVGGPQYR-------VGS---HR-QFVLLARRLAEAGFPVLRFD 64 (274)
T ss_pred eeEEEE-cCCcEEEEEEEcCCCC---C---CCeEEEEeCCcccc-------CCc---hh-HHHHHHHHHHHCCCEEEEeC
Confidence 457777 4578999999999752 1 35667677653110 011 11 11234567888999999966
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC
Q 011049 305 SIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 305 ~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~ 384 (494)
.+ |+|.+............|+.++++++.++. ...++|.++|||+||++++.++... .+++++|+++|.......
T Consensus 65 l~---G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~-~g~~~i~l~G~S~Gg~~a~~~a~~~-~~v~~lil~~p~~~~~~~ 139 (274)
T TIGR03100 65 YR---GMGDSEGENLGFEGIDADIAAAIDAFREAA-PHLRRIVAWGLCDAASAALLYAPAD-LRVAGLVLLNPWVRTEAA 139 (274)
T ss_pred CC---CCCCCCCCCCCHHHHHHHHHHHHHHHHhhC-CCCCcEEEEEECHHHHHHHHHhhhC-CCccEEEEECCccCCccc
Confidence 54 566554332234566789999999998752 1226799999999999999887664 789999999987442110
Q ss_pred C-C-Cccc------ccccc--------cccH---HHHHh----c---Cc-----------cccccCCCCCEEEEecCCCC
Q 011049 385 P-F-GFQT------EFRTL--------WEAT---NVYIE----M---SP-----------ITHANKIKKPILIIHGEVDD 427 (494)
Q Consensus 385 ~-~-~~~~------~~~~~--------~~~~---~~~~~----~---sp-----------~~~~~~~~~P~li~~G~~D~ 427 (494)
. . .... ..... |+.. ..+.. . .+ ...+.++++|+|+++|..|.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~ 219 (274)
T TIGR03100 140 QAASRIRHYYLGQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDL 219 (274)
T ss_pred chHHHHHHHHHHHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcch
Confidence 0 0 0000 00011 1100 01110 1 00 12244678999999999998
Q ss_pred CCCCCHHH-----HHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 428 KVGLFPMQ-----AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 428 ~v~~~~~~-----~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
..+ ... +..+.+.+.. ..+++.++++++|.+.....+..+.+.+.+||+
T Consensus 220 ~~~--~~~~~~~~~~~~~~~l~~--~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 220 TAQ--EFADSVLGEPAWRGALED--PGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred hHH--HHHHHhccChhhHHHhhc--CCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 642 111 0222222332 347899999999988766777889999999995
No 42
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.69 E-value=4.5e-15 Score=137.27 Aligned_cols=233 Identities=14% Similarity=0.086 Sum_probs=152.3
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHH-HhCCeEEEe
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARRFAVLA 302 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G~~v~~ 302 (494)
...+.+. ....+..++|+|....+.+ ..|+|||+|||||..++... .....+...+ .+.+.+|+.
T Consensus 63 ~~dv~~~--~~~~l~vRly~P~~~~~~~--~~p~lvyfHGGGf~~~S~~~----------~~y~~~~~~~a~~~~~vvvS 128 (336)
T KOG1515|consen 63 SKDVTID--PFTNLPVRLYRPTSSSSET--KLPVLVYFHGGGFCLGSANS----------PAYDSFCTRLAAELNCVVVS 128 (336)
T ss_pred eeeeEec--CCCCeEEEEEcCCCCCccc--CceEEEEEeCCccEeCCCCC----------chhHHHHHHHHHHcCeEEEe
Confidence 3444444 4456999999998765522 38999999999986543221 1112233344 458999999
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc----CCCCCCcEEEEecChHHHHHHHHHHhC------CCceeEE
Q 011049 303 GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR----GVADPSRIAVGGHSYGAFMTAHLLAHA------PHLFCCG 372 (494)
Q Consensus 303 ~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~----~~~d~~ri~i~G~S~GG~~a~~~~~~~------p~~~~a~ 372 (494)
++||-...+ ......+|..+++.|+.++ ..+|++||+|+|-|.||.+|..++.+. +-.+++.
T Consensus 129 VdYRLAPEh--------~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ 200 (336)
T KOG1515|consen 129 VDYRLAPEH--------PFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQ 200 (336)
T ss_pred cCcccCCCC--------CCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEE
Confidence 888744322 1133467788888888875 348999999999999999998887653 3478999
Q ss_pred EeCCCCCCCCCCCC-Ccc----cccccccccHHHHH----------h----cCccc-----cccCCC-CCEEEEecCCCC
Q 011049 373 IARSGSYNKTLTPF-GFQ----TEFRTLWEATNVYI----------E----MSPIT-----HANKIK-KPILIIHGEVDD 427 (494)
Q Consensus 373 v~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~----------~----~sp~~-----~~~~~~-~P~li~~G~~D~ 427 (494)
|++.|++......- .++ ......+...+.++ . .+|.. ...... .|+|++.++.|.
T Consensus 201 ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~ 280 (336)
T KOG1515|consen 201 ILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDV 280 (336)
T ss_pred EEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchh
Confidence 99999876322111 000 00000000111111 1 12222 111222 569999999999
Q ss_pred CCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCc----ccHHHHHHHHHHHHHHh
Q 011049 428 KVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKY 482 (494)
Q Consensus 428 ~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~fl~~~ 482 (494)
+ .+++..++++|++.|+++++..++++.|++... ......+..+.+|+.+.
T Consensus 281 L----~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 281 L----RDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred h----hhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 8 688999999999999999999999999996432 23456677788888754
No 43
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.69 E-value=8.1e-16 Score=134.10 Aligned_cols=190 Identities=22% Similarity=0.217 Sum_probs=114.2
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCCCCCC-
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDK- 314 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~- 314 (494)
|.+.||.|++... ++.|+||++||.+... ..+.... ....+++ +||+|+.|...........
T Consensus 1 l~Y~lYvP~~~~~---~~~PLVv~LHG~~~~a-----------~~~~~~s--~~~~lAd~~GfivvyP~~~~~~~~~~cw 64 (220)
T PF10503_consen 1 LSYRLYVPPGAPR---GPVPLVVVLHGCGQSA-----------EDFAAGS--GWNALADREGFIVVYPEQSRRANPQGCW 64 (220)
T ss_pred CcEEEecCCCCCC---CCCCEEEEeCCCCCCH-----------HHHHhhc--CHHHHhhcCCeEEEcccccccCCCCCcc
Confidence 4578999997532 3489999999975321 1121111 1123454 7999998654211000000
Q ss_pred -CCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-CCC-cc
Q 011049 315 -LPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-PFG-FQ 389 (494)
Q Consensus 315 -~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~-~~~-~~ 389 (494)
+.. ..........+.+.++++.++..+|++||++.|+|.||.|+..+++.+|++|+++..++|+.--... ... +.
T Consensus 65 ~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~ 144 (220)
T PF10503_consen 65 NWFSDDQQRGGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALS 144 (220)
T ss_pred cccccccccCccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHH
Confidence 000 1111223556678889999998999999999999999999999999999999999998886321100 000 00
Q ss_pred cccccccccHHHHHhcCccccc-cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhC
Q 011049 390 TEFRTLWEATNVYIEMSPITHA-NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGH 446 (494)
Q Consensus 390 ~~~~~~~~~~~~~~~~sp~~~~-~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~ 446 (494)
......-..+..... ..... ..-..|++++||+.|..|. +.+..++.+++...
T Consensus 145 ~m~~g~~~~p~~~~~--a~~~~g~~~~~P~~v~hG~~D~tV~--~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 145 AMRSGPRPAPAAAWG--ARSDAGAYPGYPRIVFHGTADTTVN--PQNADQLVAQWLNV 198 (220)
T ss_pred HhhCCCCCChHHHHH--hhhhccCCCCCCEEEEecCCCCccC--cchHHHHHHHHHHc
Confidence 000000001111100 00000 1113699999999999998 88898888888763
No 44
>PLN02872 triacylglycerol lipase
Probab=99.68 E-value=1.7e-15 Score=145.39 Aligned_cols=246 Identities=15% Similarity=0.073 Sum_probs=157.4
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCC--chhHHHHHhCC
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT--PTSSLIFLARR 297 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~G 297 (494)
..++.|+..+++.||..+....+.+..... ...+.|+|+++||.+.++ ..|.... ...+..|+++|
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~-~~~~~~~Vll~HGl~~ss-----------~~w~~~~~~~sla~~La~~G 107 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRL-GSQRGPPVLLQHGLFMAG-----------DAWFLNSPEQSLGFILADHG 107 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCC-CCCCCCeEEEeCcccccc-----------cceeecCcccchHHHHHhCC
Confidence 357789999999999999887775432111 112357899999965322 2232111 12344678999
Q ss_pred eEEEeCCCCCCCC-CCCCC--------CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC-
Q 011049 298 FAVLAGPSIPIIG-EGDKL--------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH- 367 (494)
Q Consensus 298 ~~v~~~~~~~~~g-~g~~~--------~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~- 367 (494)
|.|+.+|.||... +|... ....+.+....|+.++++++.+.. .+++.++|||+||.+++.++ .+|+
T Consensus 108 ydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~ 183 (395)
T PLN02872 108 FDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNV 183 (395)
T ss_pred CCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHH
Confidence 9999988876421 22111 112233344589999999998753 36899999999999998555 5665
Q ss_pred --ceeEEEeCCCCCCCCC--------------------------CCCC----------cccc------------------
Q 011049 368 --LFCCGIARSGSYNKTL--------------------------TPFG----------FQTE------------------ 391 (494)
Q Consensus 368 --~~~a~v~~~~~~~~~~--------------------------~~~~----------~~~~------------------ 391 (494)
+++++++.+|+..... .+.. +...
T Consensus 184 ~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n 263 (395)
T PLN02872 184 VEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFN 263 (395)
T ss_pred HHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccc
Confidence 5677777666521000 0000 0000
Q ss_pred -----------------------------------cccccccHHHHHh-cCccccccCC--CCCEEEEecCCCCCCCCCH
Q 011049 392 -----------------------------------FRTLWEATNVYIE-MSPITHANKI--KKPILIIHGEVDDKVGLFP 433 (494)
Q Consensus 392 -----------------------------------~~~~~~~~~~~~~-~sp~~~~~~~--~~P~li~~G~~D~~v~~~~ 433 (494)
......+...|.. .-|...+.++ ++|+++++|++|..++ +
T Consensus 264 ~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~--~ 341 (395)
T PLN02872 264 ASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLAD--V 341 (395)
T ss_pred hhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCC--H
Confidence 0000011122222 2345567888 5799999999999987 8
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCCCCCc--cCCcccHHHHHHHHHHHHHHhcCCC
Q 011049 434 MQAERFFDALKGHGALSRLVLLPFEHHV--YAARENVMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 434 ~~~~~~~~~l~~~g~~~~~~~~~~~~H~--~~~~~~~~~~~~~~~~fl~~~l~~~ 486 (494)
...+.+.+.|.. ..++..+++.+|. +...+..+.+++.+++||+++++..
T Consensus 342 ~dv~~l~~~Lp~---~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~~ 393 (395)
T PLN02872 342 TDVEHTLAELPS---KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKSS 393 (395)
T ss_pred HHHHHHHHHCCC---ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhhcc
Confidence 887777777753 2478889999997 4456777889999999999887654
No 45
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.68 E-value=4.6e-15 Score=140.94 Aligned_cols=236 Identities=16% Similarity=0.133 Sum_probs=144.6
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccC-------------CCCccCCCCchhHHHHHh
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRG-------------SPNEFSGMTPTSSLIFLA 295 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~ 295 (494)
+++.||.+|..+.+.|++ +..+|+++||-+...... .+.. .+.++..+...++..|.+
T Consensus 2 ~~~~~g~~l~~~~~~~~~-------~kg~v~i~HG~~eh~~~~--~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~ 72 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKN-------AIGIIVLIHGLKSHLRLQ--FLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNK 72 (332)
T ss_pred ccCCCCCeEEEeeeeccC-------CeEEEEEECCCchhhhhh--hhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHH
Confidence 566799999999998852 257999999954332110 0000 000110011234678899
Q ss_pred CCeEEEeCCCCCCCCCCCCCCC---c---hhHHHHHHHHHHHHHHHHHc------------------CCCCCCcEEEEec
Q 011049 296 RRFAVLAGPSIPIIGEGDKLPN---D---RFVEQLVSSAEAAVEEVVRR------------------GVADPSRIAVGGH 351 (494)
Q Consensus 296 ~G~~v~~~~~~~~~g~g~~~~~---~---~~~~~~~~d~~~~v~~l~~~------------------~~~d~~ri~i~G~ 351 (494)
+||.|++.|.+ |+|.+... . ...++.++|+...++.+.+. ..-...+++|+||
T Consensus 73 ~G~~V~~~D~r---GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~Gh 149 (332)
T TIGR01607 73 NGYSVYGLDLQ---GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGL 149 (332)
T ss_pred CCCcEEEeccc---ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeec
Confidence 99999995554 55544321 1 23466788888888877652 1111357999999
Q ss_pred ChHHHHHHHHHHhCCC--------ceeEEEeCCCCCCCCCC--------C----------------CCcccccccccc-c
Q 011049 352 SYGAFMTAHLLAHAPH--------LFCCGIARSGSYNKTLT--------P----------------FGFQTEFRTLWE-A 398 (494)
Q Consensus 352 S~GG~~a~~~~~~~p~--------~~~a~v~~~~~~~~~~~--------~----------------~~~~~~~~~~~~-~ 398 (494)
||||.+++.++...++ .++++|+.+|+...... . ..........+. .
T Consensus 150 SmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~ 229 (332)
T TIGR01607 150 SMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPY 229 (332)
T ss_pred cCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChh
Confidence 9999999988865432 58888888876421100 0 000000000000 0
Q ss_pred HHHHHhcCc----------------------cccccCC--CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEE
Q 011049 399 TNVYIEMSP----------------------ITHANKI--KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL 454 (494)
Q Consensus 399 ~~~~~~~sp----------------------~~~~~~~--~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 454 (494)
.......+| ...+.++ ++|+|++||++|..++ +..+..+++.+.. .+.++.+
T Consensus 230 ~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~--~~~~~~~~~~~~~--~~~~l~~ 305 (332)
T TIGR01607 230 VNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCS--YEGTVSFYNKLSI--SNKELHT 305 (332)
T ss_pred hhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccC--HHHHHHHHHhccC--CCcEEEE
Confidence 000000111 1123445 6899999999999998 8888877776644 3467889
Q ss_pred cCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 455 LPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 455 ~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
|++++|.+........+++.+.+||+
T Consensus 306 ~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 306 LEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred ECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 99999998876667889999999985
No 46
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.68 E-value=3.5e-15 Score=146.77 Aligned_cols=152 Identities=14% Similarity=0.122 Sum_probs=119.4
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
++.+||++|. +|..++++|.+......|+|||||+.|+|.+..++ ..++|++++++| +.++++...+..
T Consensus 177 ~~~~l~~~d~---dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g-~~~i~i~dl~~G--~~~~l~~~~~~~----- 245 (429)
T PRK03629 177 FPYELRVSDY---DGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESG-RSALVIQTLANG--AVRQVASFPRHN----- 245 (429)
T ss_pred cceeEEEEcC---CCCCCEEeecCCCceeeeEEcCCCCEEEEEEecCC-CcEEEEEECCCC--CeEEccCCCCCc-----
Confidence 4568999999 88899999998878889999999999999987655 678999999987 788888765543
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
..|. |||||++|+|.... ....+|+++|+++++.++++..... ...+.
T Consensus 246 ~~~~--~SPDG~~La~~~~~------------------~g~~~I~~~d~~tg~~~~lt~~~~~------------~~~~~ 293 (429)
T PRK03629 246 GAPA--FSPDGSKLAFALSK------------------TGSLNLYVMDLASGQIRQVTDGRSN------------NTEPT 293 (429)
T ss_pred CCeE--ECCCCCEEEEEEcC------------------CCCcEEEEEECCCCCEEEccCCCCC------------cCceE
Confidence 4455 99999999998631 1123599999999988887754321 13468
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
|+|||+.++|..... ..++||.+++++++.++++.
T Consensus 294 wSPDG~~I~f~s~~~-g~~~Iy~~d~~~g~~~~lt~ 328 (429)
T PRK03629 294 WFPDSQNLAYTSDQA-GRPQVYKVNINGGAPQRITW 328 (429)
T ss_pred ECCCCCEEEEEeCCC-CCceEEEEECCCCCeEEeec
Confidence 999999998876433 34689999998888887764
No 47
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.68 E-value=1.8e-15 Score=139.25 Aligned_cols=194 Identities=16% Similarity=0.199 Sum_probs=123.4
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~ 331 (494)
.|+||++||.+.+ ...|. .......+||.|+++|.+ |+|.+... ....++.++|+.+.
T Consensus 13 ~~~iv~lhG~~~~-----------~~~~~-----~~~~~l~~~~~vi~~D~~---G~G~S~~~~~~~~~~~~~~~~~~~~ 73 (257)
T TIGR03611 13 APVVVLSSGLGGS-----------GSYWA-----PQLDVLTQRFHVVTYDHR---GTGRSPGELPPGYSIAHMADDVLQL 73 (257)
T ss_pred CCEEEEEcCCCcc-----------hhHHH-----HHHHHHHhccEEEEEcCC---CCCCCCCCCcccCCHHHHHHHHHHH
Confidence 5889999996421 11121 122334578999996665 45544321 12234555666555
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCC----------------C--------
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPF----------------G-------- 387 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~----------------~-------- 387 (494)
++.+ +..++.++|||+||.+++.++.++|+.++++|.+++......... .
T Consensus 74 i~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (257)
T TIGR03611 74 LDAL------NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALF 147 (257)
T ss_pred HHHh------CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhh
Confidence 5543 346899999999999999999999999999998877543210000 0
Q ss_pred -c----cccc-----------ccccccH-------HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 011049 388 -F----QTEF-----------RTLWEAT-------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK 444 (494)
Q Consensus 388 -~----~~~~-----------~~~~~~~-------~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~ 444 (494)
+ .... ...+... ..+...+....+.++++|+|+++|++|..+| +.+++++++.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~ 225 (257)
T TIGR03611 148 LYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVP--YTQSLRLAAALP 225 (257)
T ss_pred hccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccC--HHHHHHHHHhcC
Confidence 0 0000 0000000 1111223334567789999999999999988 888877777654
Q ss_pred hCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 445 GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 445 ~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
..++.+++++||.+.. ++...+.+.+.+||+
T Consensus 226 ----~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 226 ----NAQLKLLPYGGHASNV-TDPETFNRALLDFLK 256 (257)
T ss_pred ----CceEEEECCCCCCccc-cCHHHHHHHHHHHhc
Confidence 3578889999998764 677788888888885
No 48
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.68 E-value=3.3e-15 Score=145.31 Aligned_cols=150 Identities=8% Similarity=0.010 Sum_probs=117.9
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCce-EEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLA-LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~-i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
+.+||++|. +|..++++|.+. ....|+|||||+. ++|++..++ ..+||++++.+| +.++|+...+..
T Consensus 168 ~~~l~~~d~---dg~~~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~-~~~Iyv~dl~tg--~~~~lt~~~g~~----- 235 (419)
T PRK04043 168 KSNIVLADY---TLTYQKVIVKGG-LNIFPKWANKEQTAFYYTSYGER-KPTLYKYNLYTG--KKEKIASSQGML----- 235 (419)
T ss_pred cceEEEECC---CCCceeEEccCC-CeEeEEECCCCCcEEEEEEccCC-CCEEEEEECCCC--cEEEEecCCCcE-----
Confidence 569999999 888899898885 6778999999996 666666544 579999999988 889998755433
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
..|. |||||++|+|.... ..+.+||++|+++++.++|+...+. +..+.
T Consensus 236 ~~~~--~SPDG~~la~~~~~------------------~g~~~Iy~~dl~~g~~~~LT~~~~~------------d~~p~ 283 (419)
T PRK04043 236 VVSD--VSKDGSKLLLTMAP------------------KGQPDIYLYDTNTKTLTQITNYPGI------------DVNGN 283 (419)
T ss_pred EeeE--ECCCCCEEEEEEcc------------------CCCcEEEEEECCCCcEEEcccCCCc------------cCccE
Confidence 2344 99999999998732 1234699999999988888765431 23458
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
|+|||++++|+... ...++||++++++++.++++.
T Consensus 284 ~SPDG~~I~F~Sdr-~g~~~Iy~~dl~~g~~~rlt~ 318 (419)
T PRK04043 284 FVEDDKRIVFVSDR-LGYPNIFMKKLNSGSVEQVVF 318 (419)
T ss_pred ECCCCCEEEEEECC-CCCceEEEEECCCCCeEeCcc
Confidence 99999999997654 445799999999998888874
No 49
>COG0400 Predicted esterase [General function prediction only]
Probab=99.67 E-value=7.2e-15 Score=126.70 Aligned_cols=127 Identities=25% Similarity=0.237 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHh
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE 404 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (494)
...+.+.++.+.++..+|.+|+.+.|+|.|+.+++.++.++|+.|+++|+++|..-....
T Consensus 80 ~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~-------------------- 139 (207)
T COG0400 80 TEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE-------------------- 139 (207)
T ss_pred HHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc--------------------
Confidence 455666777777777789999999999999999999999999999999999996432110
Q ss_pred cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 405 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 405 ~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
.....-.+|+|++||+.|++|| ...+.++.+.|++.|.+++...++ .||.+.. ..++.+.+|+.+.+
T Consensus 140 ----~~~~~~~~pill~hG~~Dpvvp--~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~-----e~~~~~~~wl~~~~ 206 (207)
T COG0400 140 ----LLPDLAGTPILLSHGTEDPVVP--LALAEALAEYLTASGADVEVRWHE-GGHEIPP-----EELEAARSWLANTL 206 (207)
T ss_pred ----cccccCCCeEEEeccCcCCccC--HHHHHHHHHHHHHcCCCEEEEEec-CCCcCCH-----HHHHHHHHHHHhcc
Confidence 0111235899999999999998 999999999999999999999999 7998863 55667777887654
No 50
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=5.7e-15 Score=144.71 Aligned_cols=154 Identities=11% Similarity=0.115 Sum_probs=111.6
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCce--EEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLA--LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~--i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
++.+||++|. +|+++++||........|+|||||+. |+|++.+++ ..+||++++++| +.++|+...+..
T Consensus 163 ~~~~l~~~d~---dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g-~~~I~~~~l~~g--~~~~lt~~~g~~--- 233 (428)
T PRK01029 163 KQGELWSVDY---DGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLG-VPKIFLGSLENP--AGKKILALQGNQ--- 233 (428)
T ss_pred ccceEEEEcC---CCCCceEcccCCCCcccceEccCCCceEEEEEEccCC-CceEEEEECCCC--CceEeecCCCCc---
Confidence 3679999999 99999999998877889999999987 667887776 689999999988 889999877665
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEe--eecCC---CceEEEEeeCcchhhhheeeec
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDL--FDINT---GSKERIWESNREKYFETAVALV 168 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~--~d~~~---g~~~~l~~~~~~~~~~~~~~~~ 168 (494)
..|. |||||++|+|.+.. +| ...+++ +++.+ ++.++++.....
T Consensus 234 --~~p~--wSPDG~~Laf~s~~------------~g------~~di~~~~~~~~~g~~g~~~~lt~~~~~---------- 281 (428)
T PRK01029 234 --LMPT--FSPRKKLLAFISDR------------YG------NPDLFIQSFSLETGAIGKPRRLLNEAFG---------- 281 (428)
T ss_pred --cceE--ECCCCCEEEEEECC------------CC------CcceeEEEeecccCCCCcceEeecCCCC----------
Confidence 3455 99999999998732 11 112444 35543 345566543211
Q ss_pred cCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC--CceeEeecC
Q 011049 169 FGQGEEDINLNQLKILTSKESKTEITQYHILSWPL--KKSSQITNF 212 (494)
Q Consensus 169 s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~--~~~~~lt~~ 212 (494)
....+.|||||+.++|.... ...+++|++++++ +..++++..
T Consensus 282 -~~~~p~wSPDG~~Laf~s~~-~g~~~ly~~~~~~~g~~~~~lt~~ 325 (428)
T PRK01029 282 -TQGNPSFSPDGTRLVFVSNK-DGRPRIYIMQIDPEGQSPRLLTKK 325 (428)
T ss_pred -CcCCeEECCCCCEEEEEECC-CCCceEEEEECcccccceEEeccC
Confidence 12346899999999987643 2345799988753 445666643
No 51
>PLN02511 hydrolase
Probab=99.67 E-value=3.5e-15 Score=144.64 Aligned_cols=237 Identities=12% Similarity=0.083 Sum_probs=145.2
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
..++..+++.||..+....+.+..... ....|+||++||.+. +.. ..+.......+.++||.|++
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~--~~~~p~vvllHG~~g-----------~s~--~~y~~~~~~~~~~~g~~vv~ 134 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRAL--PADAPVLILLPGLTG-----------GSD--DSYVRHMLLRARSKGWRVVV 134 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccC--CCCCCEEEEECCCCC-----------CCC--CHHHHHHHHHHHHCCCEEEE
Confidence 345556777899888765554322111 122689999999641 111 11111233456789999999
Q ss_pred CCCCCCCCCCCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc--eeEEEeCCCC
Q 011049 303 GPSIPIIGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL--FCCGIARSGS 378 (494)
Q Consensus 303 ~~~~~~~g~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~--~~a~v~~~~~ 378 (494)
+|.+| +|.+.. ...+.....+|+.++++++..+. ...++.++|+|+||.+++.++.++|+. +++++++++.
T Consensus 135 ~d~rG---~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p 209 (388)
T PLN02511 135 FNSRG---CADSPVTTPQFYSASFTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNP 209 (388)
T ss_pred EecCC---CCCCCCCCcCEEcCCchHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCC
Confidence 77664 444422 12223345789999999998763 235899999999999999999999886 7777776655
Q ss_pred CCCCC------CCCC------cc---------cc---------c--------cc-------------ccccH-HHHHhcC
Q 011049 379 YNKTL------TPFG------FQ---------TE---------F--------RT-------------LWEAT-NVYIEMS 406 (494)
Q Consensus 379 ~~~~~------~~~~------~~---------~~---------~--------~~-------------~~~~~-~~~~~~s 406 (494)
.+... ..+. +. .. . .. .+... +.|...|
T Consensus 210 ~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s 289 (388)
T PLN02511 210 FDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSS 289 (388)
T ss_pred cCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcC
Confidence 43100 0000 00 00 0 00 00111 2234556
Q ss_pred ccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHH------HHHHHHHHHHH
Q 011049 407 PITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVM------HVIWETDRWLQ 480 (494)
Q Consensus 407 p~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~------~~~~~~~~fl~ 480 (494)
+...+.++++|+|+++|++|+.+| ..... ..+.+....+++++++++||.... +... -..+.+.+||+
T Consensus 290 ~~~~L~~I~vPtLiI~g~dDpi~p--~~~~~---~~~~~~~p~~~l~~~~~gGH~~~~-E~p~~~~~~~w~~~~i~~Fl~ 363 (388)
T PLN02511 290 SSDSIKHVRVPLLCIQAANDPIAP--ARGIP---REDIKANPNCLLIVTPSGGHLGWV-AGPEAPFGAPWTDPVVMEFLE 363 (388)
T ss_pred chhhhccCCCCeEEEEcCCCCcCC--cccCc---HhHHhcCCCEEEEECCCcceeccc-cCCCCCCCCccHHHHHHHHHH
Confidence 777888999999999999999987 44321 112233456899999999997543 2221 13567888988
Q ss_pred HhcCC
Q 011049 481 KYCLS 485 (494)
Q Consensus 481 ~~l~~ 485 (494)
.....
T Consensus 364 ~~~~~ 368 (388)
T PLN02511 364 ALEEG 368 (388)
T ss_pred HHHHh
Confidence 77643
No 52
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.66 E-value=8.2e-15 Score=145.08 Aligned_cols=151 Identities=10% Similarity=0.107 Sum_probs=119.4
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++|. +|..++++|........|+|||||+.|+|.+..++ ..+||++++.++ +.++++...+.. .
T Consensus 181 ~~~l~~~d~---dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g-~~~i~~~dl~~g--~~~~l~~~~g~~-----~ 249 (435)
T PRK05137 181 IKRLAIMDQ---DGANVRYLTDGSSLVLTPRFSPNRQEITYMSYANG-RPRVYLLDLETG--QRELVGNFPGMT-----F 249 (435)
T ss_pred ceEEEEECC---CCCCcEEEecCCCCeEeeEECCCCCEEEEEEecCC-CCEEEEEECCCC--cEEEeecCCCcc-----c
Confidence 558999999 89999999988877889999999999999987665 689999999987 778888665543 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.... ....+||++|+++++.++++...+. ...+.|
T Consensus 250 ~~~--~SPDG~~la~~~~~------------------~g~~~Iy~~d~~~~~~~~Lt~~~~~------------~~~~~~ 297 (435)
T PRK05137 250 APR--FSPDGRKVVMSLSQ------------------GGNTDIYTMDLRSGTTTRLTDSPAI------------DTSPSY 297 (435)
T ss_pred CcE--ECCCCCEEEEEEec------------------CCCceEEEEECCCCceEEccCCCCc------------cCceeE
Confidence 445 99999999998632 1234699999999988887764432 124589
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
+|||++++|.... ...++||++++++++.++++.
T Consensus 298 spDG~~i~f~s~~-~g~~~Iy~~d~~g~~~~~lt~ 331 (435)
T PRK05137 298 SPDGSQIVFESDR-SGSPQLYVMNADGSNPRRISF 331 (435)
T ss_pred cCCCCEEEEEECC-CCCCeEEEEECCCCCeEEeec
Confidence 9999999987543 334689999998888888875
No 53
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.66 E-value=9.8e-15 Score=144.21 Aligned_cols=151 Identities=15% Similarity=0.135 Sum_probs=118.1
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
..+||++|. +|..++++|..+.....|+|||||++|+|++..++ ..+||+++++++ +.++++...+.. .
T Consensus 197 ~~~l~i~d~---dG~~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g-~~~L~~~dl~tg--~~~~lt~~~g~~-----~ 265 (448)
T PRK04792 197 PYQLMIADY---DGYNEQMLLRSPEPLMSPAWSPDGRKLAYVSFENR-KAEIFVQDIYTQ--VREKVTSFPGIN-----G 265 (448)
T ss_pred ceEEEEEeC---CCCCceEeecCCCcccCceECCCCCEEEEEEecCC-CcEEEEEECCCC--CeEEecCCCCCc-----C
Confidence 348999998 88889999999888889999999999999987655 679999999987 778887665433 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.... ....+||++|+++++.++++..... ...+.|
T Consensus 266 ~~~--wSPDG~~La~~~~~------------------~g~~~Iy~~dl~tg~~~~lt~~~~~------------~~~p~w 313 (448)
T PRK04792 266 APR--FSPDGKKLALVLSK------------------DGQPEIYVVDIATKALTRITRHRAI------------DTEPSW 313 (448)
T ss_pred Cee--ECCCCCEEEEEEeC------------------CCCeEEEEEECCCCCeEECccCCCC------------ccceEE
Confidence 444 99999999997632 1234699999999988877654321 134589
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
+|||+.++++... ...+++|++++++++.++++.
T Consensus 314 SpDG~~I~f~s~~-~g~~~Iy~~dl~~g~~~~Lt~ 347 (448)
T PRK04792 314 HPDGKSLIFTSER-GGKPQIYRVNLASGKVSRLTF 347 (448)
T ss_pred CCCCCEEEEEECC-CCCceEEEEECCCCCEEEEec
Confidence 9999999887643 334689999999888888863
No 54
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.65 E-value=3e-15 Score=124.93 Aligned_cols=145 Identities=26% Similarity=0.329 Sum_probs=104.6
Q ss_pred EEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 011049 257 CLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVV 336 (494)
Q Consensus 257 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~ 336 (494)
+||++||.+. +...+ ...+..|+++||.|+.++++ +.+.. ....++..+++++.
T Consensus 1 ~vv~~HG~~~-----------~~~~~----~~~~~~l~~~G~~v~~~~~~---~~~~~--------~~~~~~~~~~~~~~ 54 (145)
T PF12695_consen 1 VVVLLHGWGG-----------SRRDY----QPLAEALAEQGYAVVAFDYP---GHGDS--------DGADAVERVLADIR 54 (145)
T ss_dssp EEEEECTTTT-----------TTHHH----HHHHHHHHHTTEEEEEESCT---TSTTS--------HHSHHHHHHHHHHH
T ss_pred CEEEECCCCC-----------CHHHH----HHHHHHHHHCCCEEEEEecC---CCCcc--------chhHHHHHHHHHHH
Confidence 5899999752 11112 24566889999999996654 33332 11224445555543
Q ss_pred HcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCC
Q 011049 337 RRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKK 416 (494)
Q Consensus 337 ~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~ 416 (494)
+.. .|+++|+++|||+||.+++.++... ..++++|+++|..+ ...+.+.+.
T Consensus 55 ~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~---------------------------~~~~~~~~~ 105 (145)
T PF12695_consen 55 AGY-PDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD---------------------------SEDLAKIRI 105 (145)
T ss_dssp HHH-CTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESSG---------------------------CHHHTTTTS
T ss_pred hhc-CCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCccc---------------------------hhhhhccCC
Confidence 322 2889999999999999999999998 78999999988200 112345678
Q ss_pred CEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc
Q 011049 417 PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461 (494)
Q Consensus 417 P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 461 (494)
|+|+++|++|..++ ..+.++++++++ .+.+++++++++|+
T Consensus 106 pv~~i~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 106 PVLFIHGENDPLVP--PEQVRRLYEALP---GPKELYIIPGAGHF 145 (145)
T ss_dssp EEEEEEETT-SSSH--HHHHHHHHHHHC---SSEEEEEETTS-TT
T ss_pred cEEEEEECCCCcCC--HHHHHHHHHHcC---CCcEEEEeCCCcCc
Confidence 99999999999997 888888888887 56899999999995
No 55
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.65 E-value=4.4e-15 Score=138.89 Aligned_cols=198 Identities=13% Similarity=0.074 Sum_probs=123.0
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 331 (494)
.|.||++||.+.+. ..|..+. .....+++.||.|+++|.+ |+|.+.... .......+|+.++
T Consensus 30 ~~~ivllHG~~~~~-----------~~~~~~~-~~~~~l~~~~~~vi~~D~~---G~G~S~~~~~~~~~~~~~~~~l~~~ 94 (282)
T TIGR03343 30 GEAVIMLHGGGPGA-----------GGWSNYY-RNIGPFVDAGYRVILKDSP---GFNKSDAVVMDEQRGLVNARAVKGL 94 (282)
T ss_pred CCeEEEECCCCCch-----------hhHHHHH-HHHHHHHhCCCEEEEECCC---CCCCCCCCcCcccccchhHHHHHHH
Confidence 46799999964211 1122111 1233566789999996654 556554321 1111234555554
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC--CCCCC----------------------
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT--LTPFG---------------------- 387 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~--~~~~~---------------------- 387 (494)
++.+ +.+++.++|||+||.+++.++.++|++++++|++++..... .....
T Consensus 95 l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (282)
T TIGR03343 95 MDAL------DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQM 168 (282)
T ss_pred HHHc------CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHH
Confidence 4443 45789999999999999999999999999999987642110 00000
Q ss_pred -----ccccc------ccccc----cHH---HHHh---------cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHH
Q 011049 388 -----FQTEF------RTLWE----ATN---VYIE---------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF 440 (494)
Q Consensus 388 -----~~~~~------~~~~~----~~~---~~~~---------~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~ 440 (494)
+.... ...|. .+. .+.. .+....+.++++|+|+++|++|..++ +..+.++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~--~~~~~~~~ 246 (282)
T TIGR03343 169 LNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVP--LDHGLKLL 246 (282)
T ss_pred HhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCC--chhHHHHH
Confidence 00000 00000 000 0100 01122356789999999999999997 77777777
Q ss_pred HHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 441 DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 441 ~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+.+. ++++++++++||... .+....+.+.+.+||.
T Consensus 247 ~~~~----~~~~~~i~~agH~~~-~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 247 WNMP----DAQLHVFSRCGHWAQ-WEHADAFNRLVIDFLR 281 (282)
T ss_pred HhCC----CCEEEEeCCCCcCCc-ccCHHHHHHHHHHHhh
Confidence 6664 478899999999976 4777788888999985
No 56
>PRK10985 putative hydrolase; Provisional
Probab=99.64 E-value=1.9e-14 Score=136.78 Aligned_cols=233 Identities=18% Similarity=0.091 Sum_probs=138.0
Q ss_pred EEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCC
Q 011049 226 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 305 (494)
Q Consensus 226 ~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~ 305 (494)
.-.++..||..+.......+. . +.+.|+||++||.+. +. ...+....+..|+++||.|+..|.
T Consensus 33 ~~~~~~~dg~~~~l~w~~~~~-~---~~~~p~vll~HG~~g-----------~~--~~~~~~~~~~~l~~~G~~v~~~d~ 95 (324)
T PRK10985 33 WQRLELPDGDFVDLAWSEDPA-Q---ARHKPRLVLFHGLEG-----------SF--NSPYAHGLLEAAQKRGWLGVVMHF 95 (324)
T ss_pred eeEEECCCCCEEEEecCCCCc-c---CCCCCEEEEeCCCCC-----------CC--cCHHHHHHHHHHHHCCCEEEEEeC
Confidence 334566788766554322111 1 223699999999531 11 111112345578899999999777
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc--eeEEEeCCCCCCCCC
Q 011049 306 IPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL--FCCGIARSGSYNKTL 383 (494)
Q Consensus 306 ~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~--~~a~v~~~~~~~~~~ 383 (494)
+|..+..... ...+.....+|+..+++++.++. ...++.++|||+||.+++.+++.+++. ++++|++++..+...
T Consensus 96 rG~g~~~~~~-~~~~~~~~~~D~~~~i~~l~~~~--~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~ 172 (324)
T PRK10985 96 RGCSGEPNRL-HRIYHSGETEDARFFLRWLQREF--GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEA 172 (324)
T ss_pred CCCCCCccCC-cceECCCchHHHHHHHHHHHHhC--CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHH
Confidence 6543221111 11111234688889999998763 236799999999999888887776543 788888877654110
Q ss_pred C-----C-------C------------------C---ccccc----c----------c---cc-ccHHHHHhcCcccccc
Q 011049 384 T-----P-------F------------------G---FQTEF----R----------T---LW-EATNVYIEMSPITHAN 412 (494)
Q Consensus 384 ~-----~-------~------------------~---~~~~~----~----------~---~~-~~~~~~~~~sp~~~~~ 412 (494)
. . . . ...+. . . .+ ...+.|...++...+.
T Consensus 173 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~ 252 (324)
T PRK10985 173 CSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLN 252 (324)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHh
Confidence 0 0 0 0 00000 0 0 00 1123344556666778
Q ss_pred CCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc---cHHHHH-HHHHHHHHHhcC
Q 011049 413 KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE---NVMHVI-WETDRWLQKYCL 484 (494)
Q Consensus 413 ~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~---~~~~~~-~~~~~fl~~~l~ 484 (494)
++++|+|+++|++|+.++ ......+ .+....+++.+++++||...... ....+. +.+.+||+..+.
T Consensus 253 ~i~~P~lii~g~~D~~~~--~~~~~~~----~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 253 QIRKPTLIIHAKDDPFMT--HEVIPKP----ESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred CCCCCEEEEecCCCCCCC--hhhChHH----HHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhc
Confidence 899999999999999986 5544333 23334578899999999743221 112333 457889877653
No 57
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.63 E-value=1.7e-14 Score=134.55 Aligned_cols=212 Identities=19% Similarity=0.149 Sum_probs=127.1
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+...+|.++.+...-++ + .|+||++||.+. +...|. ..... ++++|.|+.+|.+
T Consensus 10 ~~~~~~~~~~~~~~g~~------~--~~~vv~~hG~~~-----------~~~~~~----~~~~~-l~~~~~vi~~D~~-- 63 (278)
T TIGR03056 10 RVTVGPFHWHVQDMGPT------A--GPLLLLLHGTGA-----------STHSWR----DLMPP-LARSFRVVAPDLP-- 63 (278)
T ss_pred eeeECCEEEEEEecCCC------C--CCeEEEEcCCCC-----------CHHHHH----HHHHH-HhhCcEEEeecCC--
Confidence 33346766654433221 1 478999999642 111121 12223 4567999996654
Q ss_pred CCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-
Q 011049 309 IGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT- 384 (494)
Q Consensus 309 ~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~- 384 (494)
|+|.+... ....+..++|+.++++.+ + .+++.++|||+||.+++.++.++|++++++|++++.......
T Consensus 64 -G~G~S~~~~~~~~~~~~~~~~l~~~i~~~---~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~ 136 (278)
T TIGR03056 64 -GHGFTRAPFRFRFTLPSMAEDLSALCAAE---G---LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGM 136 (278)
T ss_pred -CCCCCCCccccCCCHHHHHHHHHHHHHHc---C---CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccc
Confidence 56655322 123455566665554432 2 357899999999999999999999989988887764321100
Q ss_pred -----CC--------Ccc---------ccc---------ccccc--cHHHHH-----------------hc---Cccccc
Q 011049 385 -----PF--------GFQ---------TEF---------RTLWE--ATNVYI-----------------EM---SPITHA 411 (494)
Q Consensus 385 -----~~--------~~~---------~~~---------~~~~~--~~~~~~-----------------~~---sp~~~~ 411 (494)
+. .+. ... ...+. ....+. .. .....+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (278)
T TIGR03056 137 AGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDL 216 (278)
T ss_pred cccccchhhHhhhhcccchHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhc
Confidence 00 000 000 00000 000000 00 011235
Q ss_pred cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 412 NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 412 ~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.++++|+|+++|++|..+| ...++++.+.+. .+++.+++++||.+.. +....+.+.+.+||+
T Consensus 217 ~~i~~P~lii~g~~D~~vp--~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 217 PRITIPLHLIAGEEDKAVP--PDESKRAATRVP----TATLHVVPGGGHLVHE-EQADGVVGLILQAAE 278 (278)
T ss_pred ccCCCCEEEEEeCCCcccC--HHHHHHHHHhcc----CCeEEEECCCCCcccc-cCHHHHHHHHHHHhC
Confidence 6688999999999999997 777767665553 3578999999998764 667788888888873
No 58
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.63 E-value=1.3e-14 Score=139.93 Aligned_cols=149 Identities=15% Similarity=0.102 Sum_probs=119.1
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.+||++++ +.++..++.........|+|||||++|+|...+++ +.+||++|++++ +.++||+..+.+ .+
T Consensus 218 ~~i~~~~l---~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg-~~~iy~~dl~~~--~~~~Lt~~~gi~-----~~ 286 (425)
T COG0823 218 PRIYYLDL---NTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDG-SPDIYLMDLDGK--NLPRLTNGFGIN-----TS 286 (425)
T ss_pred ceEEEEec---cCCccceeeccCCccCCccCCCCCCEEEEEECCCC-CccEEEEcCCCC--cceecccCCccc-----cC
Confidence 68999999 77887887777788889999999999999999887 899999999998 677799888877 57
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 177 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s 177 (494)
|. |||||++|+|.+. ...+++|++++++++..++++...+. ...+.||
T Consensus 287 Ps--~spdG~~ivf~Sd------------------r~G~p~I~~~~~~g~~~~riT~~~~~------------~~~p~~S 334 (425)
T COG0823 287 PS--WSPDGSKIVFTSD------------------RGGRPQIYLYDLEGSQVTRLTFSGGG------------NSNPVWS 334 (425)
T ss_pred cc--CCCCCCEEEEEeC------------------CCCCcceEEECCCCCceeEeeccCCC------------CcCccCC
Confidence 77 9999999999973 23456799999999999888876543 1145899
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCc-eeEee
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKK-SSQIT 210 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~-~~~lt 210 (494)
|||+++++....... ..+...++.++. .+.++
T Consensus 335 pdG~~i~~~~~~~g~-~~i~~~~~~~~~~~~~lt 367 (425)
T COG0823 335 PDGDKIVFESSSGGQ-WDIDKNDLASGGKIRILT 367 (425)
T ss_pred CCCCEEEEEeccCCc-eeeEEeccCCCCcEEEcc
Confidence 999999998744222 456777665554 55554
No 59
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=3.8e-14 Score=139.63 Aligned_cols=151 Identities=12% Similarity=0.111 Sum_probs=115.9
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++|. +|..+++++........|+|||||+.|+|.+..++ ..+||+.++.++ +.++++...+.. .
T Consensus 175 ~~~L~~~D~---dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~-~~~I~~~dl~~g--~~~~l~~~~g~~-----~ 243 (427)
T PRK02889 175 RYQLQISDA---DGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESK-KPVVYVHDLATG--RRRVVANFKGSN-----S 243 (427)
T ss_pred ccEEEEECC---CCCCceEeccCCCCcccceEcCCCCEEEEEEccCC-CcEEEEEECCCC--CEEEeecCCCCc-----c
Confidence 458999998 88888999888777889999999999999987654 678999999987 777887655433 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.... ....+||++|+++++.++++...+. ...+.|
T Consensus 244 ~~~--~SPDG~~la~~~~~------------------~g~~~Iy~~d~~~~~~~~lt~~~~~------------~~~~~w 291 (427)
T PRK02889 244 APA--WSPDGRTLAVALSR------------------DGNSQIYTVNADGSGLRRLTQSSGI------------DTEPFF 291 (427)
T ss_pred ceE--ECCCCCEEEEEEcc------------------CCCceEEEEECCCCCcEECCCCCCC------------CcCeEE
Confidence 455 99999999997631 1234699999998887777654321 124589
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
+|||+++++... ....+++|.++.++++.++++.
T Consensus 292 SpDG~~l~f~s~-~~g~~~Iy~~~~~~g~~~~lt~ 325 (427)
T PRK02889 292 SPDGRSIYFTSD-RGGAPQIYRMPASGGAAQRVTF 325 (427)
T ss_pred cCCCCEEEEEec-CCCCcEEEEEECCCCceEEEec
Confidence 999999988643 3334689999988887777763
No 60
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.62 E-value=1.5e-14 Score=136.57 Aligned_cols=225 Identities=16% Similarity=0.125 Sum_probs=132.7
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
....+++...+|..+..... ..+ .+ ..|.||++||.+.. ...| ......|.++||.|++
T Consensus 20 ~~~~~~~~~~~~~~~~i~y~-~~G-~~----~~~~lvliHG~~~~-----------~~~w----~~~~~~L~~~gy~vi~ 78 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMHYV-DEG-PA----DGPPVLLLHGEPSW-----------SYLY----RKMIPILAAAGHRVIA 78 (302)
T ss_pred CceeEeecCCCCceEEEEEE-ecC-CC----CCCEEEEECCCCCc-----------hhhH----HHHHHHHHhCCCEEEE
Confidence 34556666556654443322 222 11 14689999996421 1112 1234456678999999
Q ss_pred CCCCCCCCCCCCCCCc----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 303 GPSIPIIGEGDKLPND----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 303 ~~~~~~~g~g~~~~~~----~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
+|. +|+|.+.... ...+..++|+.+.++.+ +.+++.++|||+||.++..++..+|++++++|.+++.
T Consensus 79 ~Dl---~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 79 PDL---IGFGRSDKPTRREDYTYARHVEWMRSWFEQL------DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred ECC---CCCCCCCCCCCcccCCHHHHHHHHHHHHHHc------CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCC
Confidence 555 4566653321 12345556655554433 2367999999999999999999999999999988753
Q ss_pred CCCCCC--C-----CC-c--c-------c---cccccc---ccHHHHH----------------h---cCc---------
Q 011049 379 YNKTLT--P-----FG-F--Q-------T---EFRTLW---EATNVYI----------------E---MSP--------- 407 (494)
Q Consensus 379 ~~~~~~--~-----~~-~--~-------~---~~~~~~---~~~~~~~----------------~---~sp--------- 407 (494)
...... . +. + . . .....+ +....|. . ..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (302)
T PRK00870 150 LPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANR 229 (302)
T ss_pred CCCccccchHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHH
Confidence 210000 0 00 0 0 0 000000 0000010 0 000
Q ss_pred --cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 408 --ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 408 --~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
...+.++++|+|+++|++|+.+| ... .++.+.+... ..+++.++++++|... .+..+.+...+.+||.++
T Consensus 230 ~~~~~l~~i~~P~lii~G~~D~~~~--~~~-~~~~~~~~~~-~~~~~~~i~~~gH~~~-~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 230 AAWAVLERWDKPFLTAFSDSDPITG--GGD-AILQKRIPGA-AGQPHPTIKGAGHFLQ-EDSGEELAEAVLEFIRAT 301 (302)
T ss_pred HHHHhhhcCCCceEEEecCCCCccc--Cch-HHHHhhcccc-cccceeeecCCCccch-hhChHHHHHHHHHHHhcC
Confidence 02346788999999999999987 544 6666655532 1134778999999976 467788888999999765
No 61
>PLN00021 chlorophyllase
Probab=99.62 E-value=4.2e-14 Score=131.71 Aligned_cols=208 Identities=17% Similarity=0.156 Sum_probs=130.8
Q ss_pred ceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCC
Q 011049 235 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK 314 (494)
Q Consensus 235 ~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~ 314 (494)
..+++.+++|.. .+++|+||++||.+... . ........|+++||.|++++.++..+.+
T Consensus 37 ~~~p~~v~~P~~-----~g~~PvVv~lHG~~~~~-----------~----~y~~l~~~Las~G~~VvapD~~g~~~~~-- 94 (313)
T PLN00021 37 PPKPLLVATPSE-----AGTYPVLLFLHGYLLYN-----------S----FYSQLLQHIASHGFIVVAPQLYTLAGPD-- 94 (313)
T ss_pred CCceEEEEeCCC-----CCCCCEEEEECCCCCCc-----------c----cHHHHHHHHHhCCCEEEEecCCCcCCCC--
Confidence 468999999975 24489999999975211 1 1123455788999999997765532111
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHc--------CCCCCCcEEEEecChHHHHHHHHHHhCCC-----ceeEEEeCCCCCCC
Q 011049 315 LPNDRFVEQLVSSAEAAVEEVVRR--------GVADPSRIAVGGHSYGAFMTAHLLAHAPH-----LFCCGIARSGSYNK 381 (494)
Q Consensus 315 ~~~~~~~~~~~~d~~~~v~~l~~~--------~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-----~~~a~v~~~~~~~~ 381 (494)
. ....+|..++++|+.+. ..+|.++++++|||+||++++.++..+++ +|+++|++.|+...
T Consensus 95 ---~---~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 95 ---G---TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGT 168 (313)
T ss_pred ---c---hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccc
Confidence 1 12234556666776642 23677899999999999999999998874 58899988887542
Q ss_pred CCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCC-----C----CCCCHHHHHHHHHHHHhCCCcEEE
Q 011049 382 TLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDD-----K----VGLFPMQAERFFDALKGHGALSRL 452 (494)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~-----~----v~~~~~~~~~~~~~l~~~g~~~~~ 452 (494)
.... .. .+..+ ...+ ..-++.+|+|++++..|. . .| +..+..++++..+ .+..+
T Consensus 169 ~~~~------~~----~p~il-~~~~--~s~~~~~P~liig~g~~~~~~~~~~p~~ap-~~~~~~~f~~~~~---~~~~~ 231 (313)
T PLN00021 169 SKGK------QT----PPPVL-TYAP--HSFNLDIPVLVIGTGLGGEPRNPLFPPCAP-DGVNHAEFFNECK---APAVH 231 (313)
T ss_pred cccc------CC----CCccc-ccCc--ccccCCCCeEEEecCCCcccccccccccCC-CCCCHHHHHHhcC---CCeee
Confidence 1100 00 00000 0011 122367999999999764 1 22 1223356776654 35788
Q ss_pred EEcCCCCCccCCcc----------------------cHHHHHHHHHHHHHHhcCCCC
Q 011049 453 VLLPFEHHVYAARE----------------------NVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 453 ~~~~~~~H~~~~~~----------------------~~~~~~~~~~~fl~~~l~~~~ 487 (494)
++.++.+|.-...+ .+......++.||..+|.+..
T Consensus 232 ~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~~ 288 (313)
T PLN00021 232 FVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGDT 288 (313)
T ss_pred eeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcCch
Confidence 88899999632111 112344578899999998754
No 62
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.62 E-value=8.6e-14 Score=134.43 Aligned_cols=207 Identities=14% Similarity=0.071 Sum_probs=129.7
Q ss_pred ccEEEEEEcC-CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCC----
Q 011049 223 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR---- 297 (494)
Q Consensus 223 ~~~~~~~~~~-dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G---- 297 (494)
..+.+++.+. -|.+..+++|+|+++. .+ ++|+|+++||..|... . ........|.++|
T Consensus 179 ~~~~~~~~S~~Lg~~r~v~VY~P~~y~-~~--~~PvlyllDG~~w~~~------------~--~~~~~ld~li~~g~i~P 241 (411)
T PRK10439 179 PAKEIIWKSERLGNSRRVWIYTTGDAA-PE--ERPLAILLDGQFWAES------------M--PVWPALDSLTHRGQLPP 241 (411)
T ss_pred ceEEEEEEccccCCceEEEEEECCCCC-CC--CCCEEEEEECHHhhhc------------C--CHHHHHHHHHHcCCCCc
Confidence 3566677654 5678999999999886 22 4999999999653210 0 0112233556667
Q ss_pred eEEEeCCCCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEe
Q 011049 298 FAVLAGPSIPIIGEGDKL-PNDRFVEQLVSSAEAAVEEVVRRG--VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA 374 (494)
Q Consensus 298 ~~v~~~~~~~~~g~g~~~-~~~~~~~~~~~d~~~~v~~l~~~~--~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 374 (494)
.+++.++..+...+..+. ....+...+.+++... +.++. ..|+++.+|+|+||||+.|++++.++|++|.++++
T Consensus 242 ~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~---I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s 318 (411)
T PRK10439 242 AVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQ---VRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLS 318 (411)
T ss_pred eEEEEECCCCcccccccCCchHHHHHHHHHHHHHH---HHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEE
Confidence 334554443221121111 2233444445555444 44432 25788999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEE
Q 011049 375 RSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL 454 (494)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 454 (494)
++|.+-+... ......| ..+.+... .....+..++|-+|+.|..+ ...++++.+.|+++|.++++.+
T Consensus 319 ~Sgs~ww~~~-----~~~~~~~-l~~~l~~~----~~~~~~lr~~i~~G~~E~~~---~~~~~~l~~~L~~~G~~~~~~~ 385 (411)
T PRK10439 319 QSGSFWWPHR-----GGQQEGV-LLEQLKAG----EVSARGLRIVLEAGRREPMI---MRANQALYAQLHPAGHSVFWRQ 385 (411)
T ss_pred eccceecCCc-----cCCchhH-HHHHHHhc----ccCCCCceEEEeCCCCCchH---HHHHHHHHHHHHHCCCcEEEEE
Confidence 9986421110 0000000 01111110 01112346889999999654 6778999999999999999999
Q ss_pred cCCCCCccC
Q 011049 455 LPFEHHVYA 463 (494)
Q Consensus 455 ~~~~~H~~~ 463 (494)
++| ||.+.
T Consensus 386 ~~G-GHd~~ 393 (411)
T PRK10439 386 VDG-GHDAL 393 (411)
T ss_pred CCC-CcCHH
Confidence 998 79653
No 63
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=5.6e-14 Score=138.84 Aligned_cols=151 Identities=12% Similarity=0.076 Sum_probs=115.4
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++|+ .++++++++..+.....|+|||||+.|+|+...++ ..+||+++++++ +.++++.....+ .
T Consensus 241 ~~~L~~~dl---~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g-~~~Iy~~dl~tg--~~~~lt~~~~~~-----~ 309 (448)
T PRK04792 241 KAEIFVQDI---YTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDG-QPEIYVVDIATK--ALTRITRHRAID-----T 309 (448)
T ss_pred CcEEEEEEC---CCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCC-CeEEEEEECCCC--CeEECccCCCCc-----c
Confidence 347999999 88888889887766678999999999999887666 689999999987 778888754332 4
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.+.. ...++||++|+++|+.++++..... ...+.|
T Consensus 310 ~p~--wSpDG~~I~f~s~~------------------~g~~~Iy~~dl~~g~~~~Lt~~g~~------------~~~~~~ 357 (448)
T PRK04792 310 EPS--WHPDGKSLIFTSER------------------GGKPQIYRVNLASGKVSRLTFEGEQ------------NLGGSI 357 (448)
T ss_pred ceE--ECCCCCEEEEEECC------------------CCCceEEEEECCCCCEEEEecCCCC------------CcCeeE
Confidence 455 99999999998631 1234799999999988887642211 113489
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
+|||+.+++.... .....||++++++++.+.++.
T Consensus 358 SpDG~~l~~~~~~-~g~~~I~~~dl~~g~~~~lt~ 391 (448)
T PRK04792 358 TPDGRSMIMVNRT-NGKFNIARQDLETGAMQVLTS 391 (448)
T ss_pred CCCCCEEEEEEec-CCceEEEEEECCCCCeEEccC
Confidence 9999998886543 234579999999888877764
No 64
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.62 E-value=1.9e-13 Score=122.64 Aligned_cols=200 Identities=17% Similarity=0.171 Sum_probs=130.3
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCch----hHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR----FVEQLVSSAEA 330 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~----~~~~~~~d~~~ 330 (494)
-|+|+++||-|. .|..+ +.....|+++||.|+++| .+|+|.+..... .....+.|+..
T Consensus 44 gP~illlHGfPe--------------~wysw-r~q~~~la~~~~rviA~D---lrGyG~Sd~P~~~~~Yt~~~l~~di~~ 105 (322)
T KOG4178|consen 44 GPIVLLLHGFPE--------------SWYSW-RHQIPGLASRGYRVIAPD---LRGYGFSDAPPHISEYTIDELVGDIVA 105 (322)
T ss_pred CCEEEEEccCCc--------------cchhh-hhhhhhhhhcceEEEecC---CCCCCCCCCCCCcceeeHHHHHHHHHH
Confidence 699999998652 22222 234558899999999944 557887755433 24556778777
Q ss_pred HHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC--------CC-------CCCCCccc----c
Q 011049 331 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN--------KT-------LTPFGFQT----E 391 (494)
Q Consensus 331 ~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~--------~~-------~~~~~~~~----~ 391 (494)
.++.| + -+|+.++||++|+.+|+.++..+|+++++.|..+.... .. .....++. +
T Consensus 106 lld~L---g---~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E 179 (322)
T KOG4178|consen 106 LLDHL---G---LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPE 179 (322)
T ss_pred HHHHh---c---cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcch
Confidence 77776 3 37999999999999999999999999999998765432 00 00000000 0
Q ss_pred -------------------------------ccccc---ccH-------------------HHHHhcCc--cccccCCCC
Q 011049 392 -------------------------------FRTLW---EAT-------------------NVYIEMSP--ITHANKIKK 416 (494)
Q Consensus 392 -------------------------------~~~~~---~~~-------------------~~~~~~sp--~~~~~~~~~ 416 (494)
....| ++. +.+....+ -....++++
T Consensus 180 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~i 259 (322)
T KOG4178|consen 180 TELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITI 259 (322)
T ss_pred hhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhcccccccccc
Confidence 00112 111 11222221 233456789
Q ss_pred CEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 417 PILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 417 P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
|++++.|++|...+ +..-.+.+++.... -.+.+++++.||... .+..+.+.+.++.||++..
T Consensus 260 Pv~fi~G~~D~v~~--~p~~~~~~rk~vp~--l~~~vv~~~~gH~vq-qe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 260 PVLFIWGDLDPVLP--YPIFGELYRKDVPR--LTERVVIEGIGHFVQ-QEKPQEVNQAILGFINSFS 321 (322)
T ss_pred ceEEEEecCccccc--chhHHHHHHHhhcc--ccceEEecCCccccc-ccCHHHHHHHHHHHHHhhc
Confidence 99999999999987 44222233322211 136789999999877 5788899999999998753
No 65
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.61 E-value=5.8e-14 Score=138.21 Aligned_cols=151 Identities=12% Similarity=0.077 Sum_probs=115.9
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++++ .+|++++++..+.....|+|||||+.|+|+....+ ..+||+++++++ +.++++...... .
T Consensus 222 ~~~i~i~dl---~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~g-~~~I~~~d~~tg--~~~~lt~~~~~~-----~ 290 (429)
T PRK03629 222 RSALVIQTL---ANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTG-SLNLYVMDLASG--QIRQVTDGRSNN-----T 290 (429)
T ss_pred CcEEEEEEC---CCCCeEEccCCCCCcCCeEECCCCCEEEEEEcCCC-CcEEEEEECCCC--CEEEccCCCCCc-----C
Confidence 458999999 88999999887776778999999999999876555 568999999987 778888765332 4
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.+.. ...++||++|+++++.+++...... ...+.|
T Consensus 291 ~~~--wSPDG~~I~f~s~~------------------~g~~~Iy~~d~~~g~~~~lt~~~~~------------~~~~~~ 338 (429)
T PRK03629 291 EPT--WFPDSQNLAYTSDQ------------------AGRPQVYKVNINGGAPQRITWEGSQ------------NQDADV 338 (429)
T ss_pred ceE--ECCCCCEEEEEeCC------------------CCCceEEEEECCCCCeEEeecCCCC------------ccCEEE
Confidence 455 99999999998731 1234799999999888777543221 123589
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
||||+.+++.... .....++++++++++.+.|+.
T Consensus 339 SpDG~~Ia~~~~~-~g~~~I~~~dl~~g~~~~Lt~ 372 (429)
T PRK03629 339 SSDGKFMVMVSSN-GGQQHIAKQDLATGGVQVLTD 372 (429)
T ss_pred CCCCCEEEEEEcc-CCCceEEEEECCCCCeEEeCC
Confidence 9999998886543 334579999999888888874
No 66
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.61 E-value=5.1e-14 Score=129.57 Aligned_cols=195 Identities=13% Similarity=0.086 Sum_probs=120.8
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC-chhHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVE 333 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~-~~~~~~~~~d~~~~v~ 333 (494)
.|.||++||.+. +...|. .....| ..+|.|+.+|.+ |+|.+... ....++..+|+.++++
T Consensus 16 ~~~iv~lhG~~~-----------~~~~~~----~~~~~l-~~~~~vi~~D~~---G~G~s~~~~~~~~~~~~~d~~~~l~ 76 (255)
T PRK10673 16 NSPIVLVHGLFG-----------SLDNLG----VLARDL-VNDHDIIQVDMR---NHGLSPRDPVMNYPAMAQDLLDTLD 76 (255)
T ss_pred CCCEEEECCCCC-----------chhHHH----HHHHHH-hhCCeEEEECCC---CCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 588999999642 111121 122233 467999995554 55655332 2234566778877777
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC-CCCCCC-------------CCCcccc-c------
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS-YNKTLT-------------PFGFQTE-F------ 392 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~-~~~~~~-------------~~~~~~~-~------ 392 (494)
++ ..+++.++|||+||.+++.++.++|++++++|++++. ...... ....... .
T Consensus 77 ~l------~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
T PRK10673 77 AL------QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMR 150 (255)
T ss_pred Hc------CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHH
Confidence 64 2367999999999999999999999999999986432 110000 0000000 0
Q ss_pred -----------------ccccc--cH---HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcE
Q 011049 393 -----------------RTLWE--AT---NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALS 450 (494)
Q Consensus 393 -----------------~~~~~--~~---~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~ 450 (494)
...|. .+ +.+........+.++++|+|+++|++|..++ ....+.+.+.+ ..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~--~~~~~~~~~~~----~~~ 224 (255)
T PRK10673 151 QHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVT--EAYRDDLLAQF----PQA 224 (255)
T ss_pred HhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCC--HHHHHHHHHhC----CCc
Confidence 00000 00 0111111122345678999999999999987 66555554443 346
Q ss_pred EEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 451 RLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 451 ~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
++.++++++|... .+....+.+.+.+||.+
T Consensus 225 ~~~~~~~~gH~~~-~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 225 RAHVIAGAGHWVH-AEKPDAVLRAIRRYLND 254 (255)
T ss_pred EEEEeCCCCCeee-ccCHHHHHHHHHHHHhc
Confidence 8899999999765 46677888899999875
No 67
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.60 E-value=7.1e-14 Score=131.47 Aligned_cols=195 Identities=17% Similarity=0.153 Sum_probs=121.4
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc---------hhHHHHHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---------RFVEQLVS 326 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---------~~~~~~~~ 326 (494)
|.||++||.+.+. ..|. .....|+.+ |.|+++|. .|+|.+.... ...++..+
T Consensus 30 ~~vlllHG~~~~~-----------~~w~----~~~~~L~~~-~~vi~~Dl---pG~G~S~~~~~~~~~~~~~~~~~~~a~ 90 (294)
T PLN02824 30 PALVLVHGFGGNA-----------DHWR----KNTPVLAKS-HRVYAIDL---LGYGYSDKPNPRSAPPNSFYTFETWGE 90 (294)
T ss_pred CeEEEECCCCCCh-----------hHHH----HHHHHHHhC-CeEEEEcC---CCCCCCCCCccccccccccCCHHHHHH
Confidence 6799999965221 2232 234456655 68888555 4566554321 12345566
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC---CCC-CCc------ccc-----
Q 011049 327 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT---LTP-FGF------QTE----- 391 (494)
Q Consensus 327 d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~---~~~-~~~------~~~----- 391 (494)
|+.+.++.+ + .+++.++|||+||.+++.++.++|++++++|++++..... ... ... ...
T Consensus 91 ~l~~~l~~l---~---~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (294)
T PLN02824 91 QLNDFCSDV---V---GDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETA 164 (294)
T ss_pred HHHHHHHHh---c---CCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchh
Confidence 666665544 3 2679999999999999999999999999999988643110 000 000 000
Q ss_pred --------c------cc----ccc-----cH----------------HHHHh---c----CccccccCCCCCEEEEecCC
Q 011049 392 --------F------RT----LWE-----AT----------------NVYIE---M----SPITHANKIKKPILIIHGEV 425 (494)
Q Consensus 392 --------~------~~----~~~-----~~----------------~~~~~---~----sp~~~~~~~~~P~li~~G~~ 425 (494)
. .. .+. .. ..+.+ . .....+.++++|+|+++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~ 244 (294)
T PLN02824 165 VGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEK 244 (294)
T ss_pred HHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecC
Confidence 0 00 000 00 00000 0 01133567899999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 426 DDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 426 D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
|..+| ...++.+ .+.....++++++++||... .+....+.+.+.+||+++
T Consensus 245 D~~~~--~~~~~~~----~~~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 245 DPWEP--VELGRAY----ANFDAVEDFIVLPGVGHCPQ-DEAPELVNPLIESFVARH 294 (294)
T ss_pred CCCCC--hHHHHHH----HhcCCccceEEeCCCCCChh-hhCHHHHHHHHHHHHhcC
Confidence 99987 6665443 33333368899999999876 477888999999999764
No 68
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.60 E-value=8.2e-14 Score=138.17 Aligned_cols=149 Identities=11% Similarity=0.121 Sum_probs=115.6
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP 98 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~ 98 (494)
+||++|. +|+.+++++........|+|||||+.|+|++..++ ..+||+++++++ +.++++...+.. ..|
T Consensus 180 ~l~~~d~---~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~-~~~l~~~~l~~g--~~~~l~~~~g~~-----~~~ 248 (430)
T PRK00178 180 TLQRSDY---DGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQK-RPRIFVQNLDTG--RREQITNFEGLN-----GAP 248 (430)
T ss_pred EEEEECC---CCCCceEEecCCCceeeeeECCCCCEEEEEEcCCC-CCEEEEEECCCC--CEEEccCCCCCc-----CCe
Confidence 6999999 88889999888777789999999999999987655 679999999988 778887655432 344
Q ss_pred ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccc
Q 011049 99 MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINL 178 (494)
Q Consensus 99 ~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~ 178 (494)
. |||||++|+|.... .....||++|+++++.++++...+. ...+.|+|
T Consensus 249 ~--~SpDG~~la~~~~~------------------~g~~~Iy~~d~~~~~~~~lt~~~~~------------~~~~~~sp 296 (430)
T PRK00178 249 A--WSPDGSKLAFVLSK------------------DGNPEIYVMDLASRQLSRVTNHPAI------------DTEPFWGK 296 (430)
T ss_pred E--ECCCCCEEEEEEcc------------------CCCceEEEEECCCCCeEEcccCCCC------------cCCeEECC
Confidence 4 99999999998632 1124699999999988877654321 12458999
Q ss_pred cCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 179 NQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 179 d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
||+.++|.... ...+++|.+++.+++.++++.
T Consensus 297 Dg~~i~f~s~~-~g~~~iy~~d~~~g~~~~lt~ 328 (430)
T PRK00178 297 DGRTLYFTSDR-GGKPQIYKVNVNGGRAERVTF 328 (430)
T ss_pred CCCEEEEEECC-CCCceEEEEECCCCCEEEeec
Confidence 99999887543 334689999998888887764
No 69
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.60 E-value=1.6e-14 Score=132.25 Aligned_cols=193 Identities=18% Similarity=0.187 Sum_probs=118.4
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~v 332 (494)
.|+||++||.+.+ ...|. ... .....||.|++++.+ |+|.+... .....+.++|+.+.+
T Consensus 13 ~~~li~~hg~~~~-----------~~~~~----~~~-~~l~~~~~v~~~d~~---G~G~s~~~~~~~~~~~~~~~~~~~i 73 (251)
T TIGR02427 13 APVLVFINSLGTD-----------LRMWD----PVL-PALTPDFRVLRYDKR---GHGLSDAPEGPYSIEDLADDVLALL 73 (251)
T ss_pred CCeEEEEcCcccc-----------hhhHH----HHH-HHhhcccEEEEecCC---CCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 5899999985421 11121 222 334579999996664 45544322 112345555665555
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-CC----------Ccc------------
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-PF----------GFQ------------ 389 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~-~~----------~~~------------ 389 (494)
+.+ +.+++.++|||+||++++.++.++|++++++|+.++....... .+ ...
T Consensus 74 ~~~------~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (251)
T TIGR02427 74 DHL------GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFT 147 (251)
T ss_pred HHh------CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcc
Confidence 543 3468999999999999999999999999998887754321100 00 000
Q ss_pred cccc--c-----ccc------cH-------HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc
Q 011049 390 TEFR--T-----LWE------AT-------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL 449 (494)
Q Consensus 390 ~~~~--~-----~~~------~~-------~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~ 449 (494)
.... . .+. .. ..+...+....+.++++|+|+++|++|..+| ......+.+.+. .
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~--~~~~~~~~~~~~----~ 221 (251)
T TIGR02427 148 PGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTP--PELVREIADLVP----G 221 (251)
T ss_pred cccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCC--hHHHHHHHHhCC----C
Confidence 0000 0 000 00 0011112233456788999999999999997 776666665553 3
Q ss_pred EEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 450 SRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 450 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
.+++++++++|.... +....+.+.+.+||
T Consensus 222 ~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl 250 (251)
T TIGR02427 222 ARFAEIRGAGHIPCV-EQPEAFNAALRDFL 250 (251)
T ss_pred ceEEEECCCCCcccc-cChHHHHHHHHHHh
Confidence 578999999998764 55667777777776
No 70
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.60 E-value=7.9e-14 Score=129.81 Aligned_cols=214 Identities=14% Similarity=0.126 Sum_probs=132.4
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+...... ++ .|.||++||.+.+ ...|. ..... .+.+|.|+++|. .|+
T Consensus 9 ~~~~~~~~~~~~~~---~~----~~plvllHG~~~~-----------~~~w~----~~~~~-L~~~~~vi~~Dl---~G~ 62 (276)
T TIGR02240 9 LDGQSIRTAVRPGK---EG----LTPLLIFNGIGAN-----------LELVF----PFIEA-LDPDLEVIAFDV---PGV 62 (276)
T ss_pred cCCcEEEEEEecCC---CC----CCcEEEEeCCCcc-----------hHHHH----HHHHH-hccCceEEEECC---CCC
Confidence 47777777654211 11 3568999995421 11121 12223 346799999555 466
Q ss_pred CCCCCC--chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC------
Q 011049 312 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL------ 383 (494)
Q Consensus 312 g~~~~~--~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~------ 383 (494)
|.+... ....+...+|+.+.++.+ +.+++.++|||+||.+++.++.++|++++++|++++......
T Consensus 63 G~S~~~~~~~~~~~~~~~~~~~i~~l------~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 136 (276)
T TIGR02240 63 GGSSTPRHPYRFPGLAKLAARMLDYL------DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPK 136 (276)
T ss_pred CCCCCCCCcCcHHHHHHHHHHHHHHh------CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchh
Confidence 665432 122455566766666665 236799999999999999999999999999999886542100
Q ss_pred ------CCCCcccc----------ccccc-ccHH----------------HHH------hcCccccccCCCCCEEEEecC
Q 011049 384 ------TPFGFQTE----------FRTLW-EATN----------------VYI------EMSPITHANKIKKPILIIHGE 424 (494)
Q Consensus 384 ------~~~~~~~~----------~~~~~-~~~~----------------~~~------~~sp~~~~~~~~~P~li~~G~ 424 (494)
....+... ..... .+++ .+. .......+.++++|+|+++|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 216 (276)
T TIGR02240 137 VLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGD 216 (276)
T ss_pred HHHHhcCchhhhccccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeC
Confidence 00000000 00000 0000 000 011223357889999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 425 VDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 425 ~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+|..+| +..++++.+.+.. .++.++++ ||... .+....+.+.+.+|+++.-.+
T Consensus 217 ~D~~v~--~~~~~~l~~~~~~----~~~~~i~~-gH~~~-~e~p~~~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 217 DDPIIP--LINMRLLAWRIPN----AELHIIDD-GHLFL-ITRAEAVAPIIMKFLAEERQR 269 (276)
T ss_pred CCCcCC--HHHHHHHHHhCCC----CEEEEEcC-CCchh-hccHHHHHHHHHHHHHHhhhh
Confidence 999998 8877777766543 56777776 99866 467778899999999886544
No 71
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.60 E-value=9.4e-14 Score=137.35 Aligned_cols=151 Identities=12% Similarity=0.136 Sum_probs=116.2
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++|. +++.+++||.+......|+|||||+.|+|.+...+ ..+||+++++++ +.++++...+.. .
T Consensus 183 ~~~l~i~D~---~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~-~~~l~~~dl~~g--~~~~l~~~~g~~-----~ 251 (433)
T PRK04922 183 RYALQVADS---DGYNPQTILRSAEPILSPAWSPDGKKLAYVSFERG-RSAIYVQDLATG--QRELVASFRGIN-----G 251 (433)
T ss_pred eEEEEEECC---CCCCceEeecCCCccccccCCCCCCEEEEEecCCC-CcEEEEEECCCC--CEEEeccCCCCc-----c
Confidence 347999999 88889999998877889999999999999987555 678999999987 777887665432 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.... ....+||++|+++++.++++...+. ...+.|
T Consensus 252 ~~~--~SpDG~~l~~~~s~------------------~g~~~Iy~~d~~~g~~~~lt~~~~~------------~~~~~~ 299 (433)
T PRK04922 252 APS--FSPDGRRLALTLSR------------------DGNPEIYVMDLGSRQLTRLTNHFGI------------DTEPTW 299 (433)
T ss_pred Cce--ECCCCCEEEEEEeC------------------CCCceEEEEECCCCCeEECccCCCC------------ccceEE
Confidence 445 99999999998632 1124699999999988777654321 124589
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
+|||+++++.... ...+++|.+++++++.++++.
T Consensus 300 spDG~~l~f~sd~-~g~~~iy~~dl~~g~~~~lt~ 333 (433)
T PRK04922 300 APDGKSIYFTSDR-GGRPQIYRVAASGGSAERLTF 333 (433)
T ss_pred CCCCCEEEEEECC-CCCceEEEEECCCCCeEEeec
Confidence 9999999887543 234689999998888877764
No 72
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.59 E-value=1.5e-14 Score=127.64 Aligned_cols=155 Identities=23% Similarity=0.195 Sum_probs=93.9
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC---------CCCccccc--cccc
Q 011049 328 AEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT---------PFGFQTEF--RTLW 396 (494)
Q Consensus 328 ~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~---------~~~~~~~~--~~~~ 396 (494)
+..+++||.+++.+++++|+|+|.|.||-+|+.+++++| .++|+|+++|..-.... +..+.... ...+
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 84 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFSW 84 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG-EE
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhcee
Confidence 468899999999999999999999999999999999996 78999998875321100 00000000 0000
Q ss_pred ccH------HHHH------hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCc--EEEEEcCCCCCcc
Q 011049 397 EAT------NVYI------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGAL--SRLVLLPFEHHVY 462 (494)
Q Consensus 397 ~~~------~~~~------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~--~~~~~~~~~~H~~ 462 (494)
... ..+. .....-.+.++++|+|+++|++|...| ....+..+.+.|++++.+ ++++.||++||.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~Wp-S~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 85 NEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWP-SSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp -TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS--HHHHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred cCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccc-hHHHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 000 0000 011122367789999999999999987 244556778889998865 8889999999986
Q ss_pred CCc---------------------------ccHHHHHHHHHHHHHHhcC
Q 011049 463 AAR---------------------------ENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 463 ~~~---------------------------~~~~~~~~~~~~fl~~~l~ 484 (494)
..+ ...++.+.++++||++||.
T Consensus 164 ~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 164 EPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp -STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred cCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 311 0235678899999999986
No 73
>PLN02965 Probable pheophorbidase
Probab=99.59 E-value=9.7e-14 Score=127.55 Aligned_cols=195 Identities=11% Similarity=0.074 Sum_probs=121.5
Q ss_pred EEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHH
Q 011049 257 CLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVE 333 (494)
Q Consensus 257 ~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~ 333 (494)
.||++||.+.+ ...|. .....|+++||.|+++|. +|+|.+... ....+...+|+.+.++
T Consensus 5 ~vvllHG~~~~-----------~~~w~----~~~~~L~~~~~~via~Dl---~G~G~S~~~~~~~~~~~~~a~dl~~~l~ 66 (255)
T PLN02965 5 HFVFVHGASHG-----------AWCWY----KLATLLDAAGFKSTCVDL---TGAGISLTDSNTVSSSDQYNRPLFALLS 66 (255)
T ss_pred EEEEECCCCCC-----------cCcHH----HHHHHHhhCCceEEEecC---CcCCCCCCCccccCCHHHHHHHHHHHHH
Confidence 48999997521 11121 234466788999999555 456655322 1224566677777666
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC---CCC-C-------C----CCCc--ccccccc-
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY---NKT-L-------T----PFGF--QTEFRTL- 395 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~---~~~-~-------~----~~~~--~~~~~~~- 395 (494)
.+ + + .+++.++||||||.++..++.++|++++.+|..++.. ... . . .+.+ .......
T Consensus 67 ~l---~-~-~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (255)
T PLN02965 67 DL---P-P-DHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPP 141 (255)
T ss_pred hc---C-C-CCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCc
Confidence 54 2 1 1589999999999999999999999999999877541 100 0 0 0000 0000000
Q ss_pred ---cccHH---H-H-------------Hh--cCcc----------ccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHH
Q 011049 396 ---WEATN---V-Y-------------IE--MSPI----------THANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 443 (494)
Q Consensus 396 ---~~~~~---~-~-------------~~--~sp~----------~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l 443 (494)
....+ . + .. ..+. ..+.++++|+|+++|++|..+| +..++.+.+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~--~~~~~~~~~~~ 219 (255)
T PLN02965 142 TGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFD--PVRQDVMVENW 219 (255)
T ss_pred chhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCC--HHHHHHHHHhC
Confidence 00000 0 0 00 0000 1233588999999999999998 77666666555
Q ss_pred HhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 444 KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 444 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
. ..++.+++++||.... +..+.+.+.+.+|+++
T Consensus 220 ~----~a~~~~i~~~GH~~~~-e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 220 P----PAQTYVLEDSDHSAFF-SVPTTLFQYLLQAVSS 252 (255)
T ss_pred C----cceEEEecCCCCchhh-cCHHHHHHHHHHHHHH
Confidence 4 3578999999999874 7788888888888764
No 74
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.59 E-value=1.3e-13 Score=136.67 Aligned_cols=152 Identities=11% Similarity=0.123 Sum_probs=116.4
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++++ ++++.++++..+.....|+|||||+.|+|....++ ..+||+++++++ +.++++.....+ .
T Consensus 222 ~~~l~~~~l---~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~g-~~~Iy~~d~~~~--~~~~lt~~~~~~-----~ 290 (430)
T PRK00178 222 RPRIFVQNL---DTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDG-NPEIYVMDLASR--QLSRVTNHPAID-----T 290 (430)
T ss_pred CCEEEEEEC---CCCCEEEccCCCCCcCCeEECCCCCEEEEEEccCC-CceEEEEECCCC--CeEEcccCCCCc-----C
Confidence 348999999 88898999887766778999999999999887666 679999999987 778888755433 4
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.+.. ...++||++|+.+|+.++++..... ...+.|
T Consensus 291 ~~~--~spDg~~i~f~s~~------------------~g~~~iy~~d~~~g~~~~lt~~~~~------------~~~~~~ 338 (430)
T PRK00178 291 EPF--WGKDGRTLYFTSDR------------------GGKPQIYKVNVNGGRAERVTFVGNY------------NARPRL 338 (430)
T ss_pred CeE--ECCCCCEEEEEECC------------------CCCceEEEEECCCCCEEEeecCCCC------------ccceEE
Confidence 455 99999999998631 1234699999999988777643211 123579
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecC
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITNF 212 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~ 212 (494)
||||+.+++..... ....|+++++++++.+.|+..
T Consensus 339 Spdg~~i~~~~~~~-~~~~l~~~dl~tg~~~~lt~~ 373 (430)
T PRK00178 339 SADGKTLVMVHRQD-GNFHVAAQDLQRGSVRILTDT 373 (430)
T ss_pred CCCCCEEEEEEccC-CceEEEEEECCCCCEEEccCC
Confidence 99999998876432 345799999999888888753
No 75
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.58 E-value=1.7e-13 Score=135.03 Aligned_cols=151 Identities=10% Similarity=0.145 Sum_probs=114.8
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++|+ .+++.++++..+.....|+|||||+.|+|+...++ ..+||+++++++ +.++++.....+ .
T Consensus 219 ~~~I~~~dl---~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g-~~~Iy~~d~~~~--~~~~lt~~~~~~-----~ 287 (427)
T PRK02889 219 KPVVYVHDL---ATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRDG-NSQIYTVNADGS--GLRRLTQSSGID-----T 287 (427)
T ss_pred CcEEEEEEC---CCCCEEEeecCCCCccceEECCCCCEEEEEEccCC-CceEEEEECCCC--CcEECCCCCCCC-----c
Confidence 347999999 88888889877767778999999999999877666 689999999887 778888755433 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.+.. ...++||.+++++++.++++..... ...+.|
T Consensus 288 ~~~--wSpDG~~l~f~s~~------------------~g~~~Iy~~~~~~g~~~~lt~~g~~------------~~~~~~ 335 (427)
T PRK02889 288 EPF--FSPDGRSIYFTSDR------------------GGAPQIYRMPASGGAAQRVTFTGSY------------NTSPRI 335 (427)
T ss_pred CeE--EcCCCCEEEEEecC------------------CCCcEEEEEECCCCceEEEecCCCC------------cCceEE
Confidence 455 99999999998631 1234699999998887777643211 123589
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
||||+.+++.... ....+|+++++.+++.++++.
T Consensus 336 SpDG~~Ia~~s~~-~g~~~I~v~d~~~g~~~~lt~ 369 (427)
T PRK02889 336 SPDGKLLAYISRV-GGAFKLYVQDLATGQVTALTD 369 (427)
T ss_pred CCCCCEEEEEEcc-CCcEEEEEEECCCCCeEEccC
Confidence 9999999886543 223479999998888887764
No 76
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.58 E-value=1.4e-13 Score=136.20 Aligned_cols=151 Identities=13% Similarity=0.066 Sum_probs=116.0
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++++ ++++.++++..+.....|+|||||+.|+|+...++ +.+||+++++++ +.++||.....+ .
T Consensus 225 ~~~i~~~dl---~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g-~~~Iy~~d~~~~--~~~~Lt~~~~~~-----~ 293 (435)
T PRK05137 225 RPRVYLLDL---ETGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQGG-NTDIYTMDLRSG--TTTRLTDSPAID-----T 293 (435)
T ss_pred CCEEEEEEC---CCCcEEEeecCCCcccCcEECCCCCEEEEEEecCC-CceEEEEECCCC--ceEEccCCCCcc-----C
Confidence 358999999 88888999987777789999999999999887666 689999999988 778898766443 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.+.. ...++||++|+++++.++++...+. ...+.|
T Consensus 294 ~~~--~spDG~~i~f~s~~------------------~g~~~Iy~~d~~g~~~~~lt~~~~~------------~~~~~~ 341 (435)
T PRK05137 294 SPS--YSPDGSQIVFESDR------------------SGSPQLYVMNADGSNPRRISFGGGR------------YSTPVW 341 (435)
T ss_pred cee--EcCCCCEEEEEECC------------------CCCCeEEEEECCCCCeEEeecCCCc------------ccCeEE
Confidence 455 99999999998731 1134699999999988888754322 123579
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
||||+.+++..... ....+++++++++..+.++.
T Consensus 342 SpdG~~ia~~~~~~-~~~~i~~~d~~~~~~~~lt~ 375 (435)
T PRK05137 342 SPRGDLIAFTKQGG-GQFSIGVMKPDGSGERILTS 375 (435)
T ss_pred CCCCCEEEEEEcCC-CceEEEEEECCCCceEeccC
Confidence 99999998876432 23478999987776666653
No 77
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.58 E-value=1.3e-13 Score=134.88 Aligned_cols=222 Identities=14% Similarity=0.143 Sum_probs=132.2
Q ss_pred EEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH---hCCeEEEeC
Q 011049 227 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL---ARRFAVLAG 303 (494)
Q Consensus 227 ~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~G~~v~~~ 303 (494)
..|.+..|.++++....|++. .+.|.||++||.+.+ ...|.. .....|+ .++|.|+++
T Consensus 178 ~~~~~~~~~~l~~~~~gp~~~-----~~k~~VVLlHG~~~s-----------~~~W~~---~~~~~L~~~~~~~yrVia~ 238 (481)
T PLN03087 178 TSWLSSSNESLFVHVQQPKDN-----KAKEDVLFIHGFISS-----------SAFWTE---TLFPNFSDAAKSTYRLFAV 238 (481)
T ss_pred eeeEeeCCeEEEEEEecCCCC-----CCCCeEEEECCCCcc-----------HHHHHH---HHHHHHHHHhhCCCEEEEE
Confidence 345555667888888888752 114789999996421 111211 1112233 479999996
Q ss_pred CCCCCCCCCCCCCC--c-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 304 PSIPIIGEGDKLPN--D-RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 304 ~~~~~~g~g~~~~~--~-~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
|.+ |+|.+... . ...++..+|+. ..+++. ...+++.++|||+||++++.++.++|++++++|++++...
T Consensus 239 Dl~---G~G~S~~p~~~~ytl~~~a~~l~---~~ll~~--lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~ 310 (481)
T PLN03087 239 DLL---GFGRSPKPADSLYTLREHLEMIE---RSVLER--YKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYY 310 (481)
T ss_pred CCC---CCCCCcCCCCCcCCHHHHHHHHH---HHHHHH--cCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcc
Confidence 654 56655322 1 11233344442 122232 1236899999999999999999999999999999876432
Q ss_pred CCCC----------------CC---Cccc------c--ccc----------cccc----------HHHHH----hc--Cc
Q 011049 381 KTLT----------------PF---GFQT------E--FRT----------LWEA----------TNVYI----EM--SP 407 (494)
Q Consensus 381 ~~~~----------------~~---~~~~------~--~~~----------~~~~----------~~~~~----~~--sp 407 (494)
.... .+ .+.. + ... .|+. ...+. .. .+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~ 390 (481)
T PLN03087 311 PVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNA 390 (481)
T ss_pred ccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchh
Confidence 1000 00 0000 0 000 0110 00000 00 00
Q ss_pred c--------------------ccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCccc
Q 011049 408 I--------------------THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN 467 (494)
Q Consensus 408 ~--------------------~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 467 (494)
. ....++++|+|+++|++|..+| +..++.+.+.+. ..++++++++||.....+.
T Consensus 391 ~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP--~~~~~~la~~iP----~a~l~vI~~aGH~~~v~e~ 464 (481)
T PLN03087 391 AWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIP--VECSYAVKAKVP----RARVKVIDDKDHITIVVGR 464 (481)
T ss_pred hHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCC--HHHHHHHHHhCC----CCEEEEeCCCCCcchhhcC
Confidence 0 0112588999999999999998 888777766664 3689999999998664466
Q ss_pred HHHHHHHHHHHHHH
Q 011049 468 VMHVIWETDRWLQK 481 (494)
Q Consensus 468 ~~~~~~~~~~fl~~ 481 (494)
...+.+.+.+|+..
T Consensus 465 p~~fa~~L~~F~~~ 478 (481)
T PLN03087 465 QKEFARELEEIWRR 478 (481)
T ss_pred HHHHHHHHHHHhhc
Confidence 67888888888754
No 78
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.58 E-value=7.9e-14 Score=127.41 Aligned_cols=195 Identities=18% Similarity=0.125 Sum_probs=113.6
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHH-HHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAA-VEE 334 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~-v~~ 334 (494)
|+||++||.+. +...|. .....|+ +||.|+.++.+ |+|.+...........+++... +..
T Consensus 2 ~~vv~~hG~~~-----------~~~~~~----~~~~~L~-~~~~v~~~d~~---g~G~s~~~~~~~~~~~~~~~~~~~~~ 62 (251)
T TIGR03695 2 PVLVFLHGFLG-----------SGADWQ----ALIELLG-PHFRCLAIDLP---GHGSSQSPDEIERYDFEEAAQDILAT 62 (251)
T ss_pred CEEEEEcCCCC-----------chhhHH----HHHHHhc-ccCeEEEEcCC---CCCCCCCCCccChhhHHHHHHHHHHH
Confidence 67999999642 111221 2334555 89999996654 5555533211111112222222 333
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC-----CC--------cccc----------
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-----FG--------FQTE---------- 391 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~-----~~--------~~~~---------- 391 (494)
+.+. .+.+++.++|||+||.+++.++.++|+.++++++.++........ .. +...
T Consensus 63 ~~~~--~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (251)
T TIGR03695 63 LLDQ--LGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWY 140 (251)
T ss_pred HHHH--cCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHh
Confidence 4333 234789999999999999999999999999999887653211000 00 0000
Q ss_pred ----ccc---cc-ccH----------------HHHH------hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHH
Q 011049 392 ----FRT---LW-EAT----------------NVYI------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFD 441 (494)
Q Consensus 392 ----~~~---~~-~~~----------------~~~~------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~ 441 (494)
... .. ... ..+. ..++...+.++++|+|+++|++|..++ . ..+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~---~----~~~ 213 (251)
T TIGR03695 141 QQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV---Q----IAK 213 (251)
T ss_pred cCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH---H----HHH
Confidence 000 00 000 0000 012223456788999999999998642 2 233
Q ss_pred HHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 442 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 442 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
.+.+...+++++++++++|.+.. +....+...+.+||
T Consensus 214 ~~~~~~~~~~~~~~~~~gH~~~~-e~~~~~~~~i~~~l 250 (251)
T TIGR03695 214 EMQKLLPNLTLVIIANAGHNIHL-ENPEAFAKILLAFL 250 (251)
T ss_pred HHHhcCCCCcEEEEcCCCCCcCc-cChHHHHHHHHHHh
Confidence 44444456789999999998764 55667777788886
No 79
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.57 E-value=1.7e-13 Score=132.09 Aligned_cols=199 Identities=15% Similarity=0.124 Sum_probs=121.7
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc---hhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~d~~~~ 331 (494)
.|.||++||.+.+ ...|. .....| +.+|.|+.+|.+ |+|.+.... ...+...+++.+.
T Consensus 88 gp~lvllHG~~~~-----------~~~w~----~~~~~L-~~~~~via~Dl~---G~G~S~~~~~~~~~~~~~a~~l~~~ 148 (360)
T PLN02679 88 GPPVLLVHGFGAS-----------IPHWR----RNIGVL-AKNYTVYAIDLL---GFGASDKPPGFSYTMETWAELILDF 148 (360)
T ss_pred CCeEEEECCCCCC-----------HHHHH----HHHHHH-hcCCEEEEECCC---CCCCCCCCCCccccHHHHHHHHHHH
Confidence 3789999996521 11121 122234 458999995554 566554321 1234555565555
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHH-hCCCceeEEEeCCCCCCCCC----CCCC----------c--------
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA-HAPHLFCCGIARSGSYNKTL----TPFG----------F-------- 388 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~-~~p~~~~a~v~~~~~~~~~~----~~~~----------~-------- 388 (494)
++.+ + .+++.++|||+||.+++.++. ++|++++++|++++...... ..+. +
T Consensus 149 l~~l---~---~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (360)
T PLN02679 149 LEEV---V---QKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRG 222 (360)
T ss_pred HHHh---c---CCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchh
Confidence 5543 2 368999999999999988887 47999999998876431100 0000 0
Q ss_pred ------cc----c-c--------ccccc-c----------------HHHHHh-------cCccccccCCCCCEEEEecCC
Q 011049 389 ------QT----E-F--------RTLWE-A----------------TNVYIE-------MSPITHANKIKKPILIIHGEV 425 (494)
Q Consensus 389 ------~~----~-~--------~~~~~-~----------------~~~~~~-------~sp~~~~~~~~~P~li~~G~~ 425 (494)
.. . . ..... . ...+.. .+....+.++++|+|+++|++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~ 302 (360)
T PLN02679 223 IASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQ 302 (360)
T ss_pred hHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCC
Confidence 00 0 0 00000 0 000110 011234567889999999999
Q ss_pred CCCCCCCHHHH-HHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 426 DDKVGLFPMQA-ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 426 D~~v~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
|..+| +... .++++.+.+.-.+.++++++++||... .+..+.+.+.+.+||.+
T Consensus 303 D~~~p--~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~-~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 303 DPFTP--LDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPH-DDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CCCcC--chhhHHHHHHhhhccCCceEEEEcCCCCCCcc-ccCHHHHHHHHHHHHHh
Confidence 99987 5532 235555655545689999999999876 47788899999999975
No 80
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.57 E-value=2.3e-13 Score=133.38 Aligned_cols=155 Identities=15% Similarity=0.120 Sum_probs=111.8
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEE--cCCCC-CCCceEeeecccccccC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLV--CPGSK-DVAPRVLFDRVFENVYS 93 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~--~~~~g-~~~~~~lt~~~~~~~~~ 93 (494)
+.+||++++ ++|+.++||..+.....|+|||||++|+|++...+ +.++|++ +++++ .++++++|......
T Consensus 210 ~~~I~~~~l---~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g-~~di~~~~~~~~~g~~g~~~~lt~~~~~~--- 282 (428)
T PRK01029 210 VPKIFLGSL---ENPAGKKILALQGNQLMPTFSPRKKLLAFISDRYG-NPDLFIQSFSLETGAIGKPRRLLNEAFGT--- 282 (428)
T ss_pred CceEEEEEC---CCCCceEeecCCCCccceEECCCCCEEEEEECCCC-CcceeEEEeecccCCCCcceEeecCCCCC---
Confidence 458999999 89999999998888889999999999999987655 5678886 44432 13678888653221
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCC--CceEEEEeeCcchhhhheeeeccCC
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT--GSKERIWESNREKYFETAVALVFGQ 171 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~--g~~~~l~~~~~~~~~~~~~~~~s~~ 171 (494)
...|. |||||++|+|.+.. ....+||++++++ ++.++++...+. .
T Consensus 283 -~~~p~--wSPDG~~Laf~s~~------------------~g~~~ly~~~~~~~g~~~~~lt~~~~~------------~ 329 (428)
T PRK01029 283 -QGNPS--FSPDGTRLVFVSNK------------------DGRPRIYIMQIDPEGQSPRLLTKKYRN------------S 329 (428)
T ss_pred -cCCeE--ECCCCCEEEEEECC------------------CCCceEEEEECcccccceEEeccCCCC------------c
Confidence 14455 99999999998731 1223688888753 445555543221 1
Q ss_pred CcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecC
Q 011049 172 GEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNF 212 (494)
Q Consensus 172 ~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~ 212 (494)
..+.|||||+++++..... ...+|+++++++++.++|+..
T Consensus 330 ~~p~wSPDG~~Laf~~~~~-g~~~I~v~dl~~g~~~~Lt~~ 369 (428)
T PRK01029 330 SCPAWSPDGKKIAFCSVIK-GVRQICVYDLATGRDYQLTTS 369 (428)
T ss_pred cceeECCCCCEEEEEEcCC-CCcEEEEEECCCCCeEEccCC
Confidence 2458999999999876542 346899999999988888743
No 81
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.56 E-value=5.3e-13 Score=125.61 Aligned_cols=212 Identities=13% Similarity=0.095 Sum_probs=129.3
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 311 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 311 (494)
.+|.++.+... + . .|.||++||.+.+ ...|. .....|++++ .|+++|.+ |+
T Consensus 14 ~~g~~i~y~~~---G-----~--g~~vvllHG~~~~-----------~~~w~----~~~~~L~~~~-~via~D~~---G~ 64 (295)
T PRK03592 14 VLGSRMAYIET---G-----E--GDPIVFLHGNPTS-----------SYLWR----NIIPHLAGLG-RCLAPDLI---GM 64 (295)
T ss_pred ECCEEEEEEEe---C-----C--CCEEEEECCCCCC-----------HHHHH----HHHHHHhhCC-EEEEEcCC---CC
Confidence 37777665543 1 1 3679999996521 11222 2444666676 88885554 56
Q ss_pred CCCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC---CCC
Q 011049 312 GDKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL---TPF 386 (494)
Q Consensus 312 g~~~~~~--~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~---~~~ 386 (494)
|.+.... .......+|+.+.++.+ + .+++.++|||+||.+++.++.++|++++++|.+++...... ...
T Consensus 65 G~S~~~~~~~~~~~~a~dl~~ll~~l---~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~ 138 (295)
T PRK03592 65 GASDKPDIDYTFADHARYLDAWFDAL---G---LDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPP 138 (295)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh---C---CCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcch
Confidence 6554321 22455566666665554 2 36899999999999999999999999999998886432100 000
Q ss_pred C-------cc--c--c-------------cccc---cccHH---HHH-----------------hcCc------------
Q 011049 387 G-------FQ--T--E-------------FRTL---WEATN---VYI-----------------EMSP------------ 407 (494)
Q Consensus 387 ~-------~~--~--~-------------~~~~---~~~~~---~~~-----------------~~sp------------ 407 (494)
. +. . . .... .-.++ .+. ...+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (295)
T PRK03592 139 AVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVE 218 (295)
T ss_pred hHHHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhh
Confidence 0 00 0 0 0000 00000 000 0000
Q ss_pred --cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 408 --ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 408 --~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
...+.++++|+|+++|++|..++ +....++...+.. +.++.+++++||... .+..+.+.+.+.+|+.+...
T Consensus 219 ~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~~~~---~~~~~~i~~~gH~~~-~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 219 EYAQWLATSDVPKLLINAEPGAILT--TGAIRDWCRSWPN---QLEITVFGAGLHFAQ-EDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred HhHHHhccCCCCeEEEeccCCcccC--cHHHHHHHHHhhh---hcceeeccCcchhhh-hcCHHHHHHHHHHHHHHhcc
Confidence 11245678999999999999985 4544455443332 368889999999987 46788899999999987643
No 82
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.56 E-value=8.4e-13 Score=128.61 Aligned_cols=204 Identities=17% Similarity=0.114 Sum_probs=120.2
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCch---hHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR---FVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~---~~~~~~~d~~~~ 331 (494)
.|+||++||.+... ..|. .....|+ ++|.|+++|.+ |+|.+..... ......+.+.+.
T Consensus 105 ~p~vvllHG~~~~~-----------~~~~----~~~~~L~-~~~~vi~~D~r---G~G~S~~~~~~~~~~~~~~~~~~~~ 165 (402)
T PLN02894 105 APTLVMVHGYGASQ-----------GFFF----RNFDALA-SRFRVIAIDQL---GWGGSSRPDFTCKSTEETEAWFIDS 165 (402)
T ss_pred CCEEEEECCCCcch-----------hHHH----HHHHHHH-hCCEEEEECCC---CCCCCCCCCcccccHHHHHHHHHHH
Confidence 58999999965211 1111 1233444 56999996655 4555432211 111111222222
Q ss_pred -HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-C-----------C-----------C
Q 011049 332 -VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-P-----------F-----------G 387 (494)
Q Consensus 332 -v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~-~-----------~-----------~ 387 (494)
.+++... +.+++.++|||+||++++.++.++|++++++|+.+|....... . + .
T Consensus 166 i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (402)
T PLN02894 166 FEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESN 242 (402)
T ss_pred HHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcC
Confidence 2344333 3468999999999999999999999999999988765311000 0 0 0
Q ss_pred c-c---------------ccc----------c--cccccHHHH---H-----------------------hcCcc-cccc
Q 011049 388 F-Q---------------TEF----------R--TLWEATNVY---I-----------------------EMSPI-THAN 412 (494)
Q Consensus 388 ~-~---------------~~~----------~--~~~~~~~~~---~-----------------------~~sp~-~~~~ 412 (494)
+ . ... . ...+..+.+ . ...+. ..+.
T Consensus 243 ~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 322 (402)
T PLN02894 243 FTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESAS 322 (402)
T ss_pred CCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcc
Confidence 0 0 000 0 000000000 0 01122 2367
Q ss_pred CCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCCC
Q 011049 413 KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 413 ~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
++++|+++++|++|..++ ....++.+.+ +.++++++++++||... .++...+.+.+.+|++.++....
T Consensus 323 ~I~vP~liI~G~~D~i~~---~~~~~~~~~~---~~~~~~~~i~~aGH~~~-~E~P~~f~~~l~~~~~~~~~~~~ 390 (402)
T PLN02894 323 EWKVPTTFIYGRHDWMNY---EGAVEARKRM---KVPCEIIRVPQGGHFVF-LDNPSGFHSAVLYACRKYLSPDR 390 (402)
T ss_pred cCCCCEEEEEeCCCCCCc---HHHHHHHHHc---CCCCcEEEeCCCCCeee-ccCHHHHHHHHHHHHHHhccCCc
Confidence 789999999999998653 4444443333 44578999999999866 47788899999999999987643
No 83
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.55 E-value=4.3e-13 Score=132.67 Aligned_cols=151 Identities=15% Similarity=0.146 Sum_probs=114.7
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
+.+||++++ .+++.++++..+.....|+|||||+.|+|+...++ +.+||+++++++ +.++++.....+ .
T Consensus 227 ~~~l~~~dl---~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g-~~~Iy~~d~~~g--~~~~lt~~~~~~-----~ 295 (433)
T PRK04922 227 RSAIYVQDL---ATGQRELVASFRGINGAPSFSPDGRRLALTLSRDG-NPEIYVMDLGSR--QLTRLTNHFGID-----T 295 (433)
T ss_pred CcEEEEEEC---CCCCEEEeccCCCCccCceECCCCCEEEEEEeCCC-CceEEEEECCCC--CeEECccCCCCc-----c
Confidence 347999999 88888889877766778999999999999887666 679999999987 778888654332 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.|. |||||++|+|.+.. ...++||.+|+++++.++++..... ...+.|
T Consensus 296 ~~~--~spDG~~l~f~sd~------------------~g~~~iy~~dl~~g~~~~lt~~g~~------------~~~~~~ 343 (433)
T PRK04922 296 EPT--WAPDGKSIYFTSDR------------------GGRPQIYRVAASGGSAERLTFQGNY------------NARASV 343 (433)
T ss_pred ceE--ECCCCCEEEEEECC------------------CCCceEEEEECCCCCeEEeecCCCC------------ccCEEE
Confidence 444 99999999998731 1234699999999888887643211 123589
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
||||+.+++.... .....|+++++.+++.+.|+.
T Consensus 344 SpDG~~Ia~~~~~-~~~~~I~v~d~~~g~~~~Lt~ 377 (433)
T PRK04922 344 SPDGKKIAMVHGS-GGQYRIAVMDLSTGSVRTLTP 377 (433)
T ss_pred CCCCCEEEEEECC-CCceeEEEEECCCCCeEECCC
Confidence 9999999887542 223479999998888887764
No 84
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.55 E-value=3.3e-13 Score=130.29 Aligned_cols=155 Identities=12% Similarity=0.111 Sum_probs=123.5
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
...+|++.|- +|-..+.++........|.|||||+.|+|.+.+.+...++|+++++++ ...++....+..
T Consensus 171 ~~~~l~~~D~---dg~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g--~~~~i~~~~g~~----- 240 (425)
T COG0823 171 LPYELALGDY---DGYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTG--KRPVILNFNGNN----- 240 (425)
T ss_pred CCceEEEEcc---CCcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCC--ccceeeccCCcc-----
Confidence 4558999998 777888899888888899999999999999877662379999999988 556666666655
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
..|. |||||++|+|...+ .....||++|+.++...+|+...+. +..++
T Consensus 241 ~~P~--fspDG~~l~f~~~r------------------dg~~~iy~~dl~~~~~~~Lt~~~gi------------~~~Ps 288 (425)
T COG0823 241 GAPA--FSPDGSKLAFSSSR------------------DGSPDIYLMDLDGKNLPRLTNGFGI------------NTSPS 288 (425)
T ss_pred CCcc--CCCCCCEEEEEECC------------------CCCccEEEEcCCCCcceecccCCcc------------ccCcc
Confidence 5566 99999999999842 2344699999999988787776653 23679
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCC
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFP 213 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~ 213 (494)
|+|||++++|....... ++||++++++++.+++|...
T Consensus 289 ~spdG~~ivf~Sdr~G~-p~I~~~~~~g~~~~riT~~~ 325 (425)
T COG0823 289 WSPDGSKIVFTSDRGGR-PQIYLYDLEGSQVTRLTFSG 325 (425)
T ss_pred CCCCCCEEEEEeCCCCC-cceEEECCCCCceeEeeccC
Confidence 99999999998655444 48999999999888887543
No 85
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.55 E-value=9.4e-14 Score=131.12 Aligned_cols=213 Identities=16% Similarity=0.121 Sum_probs=123.3
Q ss_pred EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 228 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 228 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
.+...||.++.+...-++ + .+.||++||++... . . ......+...+|.|+++|.+
T Consensus 8 ~~~~~~~~~l~y~~~g~~------~--~~~lvllHG~~~~~-----------~-~----~~~~~~~~~~~~~vi~~D~~- 62 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSGNP------D--GKPVVFLHGGPGSG-----------T-D----PGCRRFFDPETYRIVLFDQR- 62 (306)
T ss_pred eEEcCCCcEEEEEECcCC------C--CCEEEEECCCCCCC-----------C-C----HHHHhccCccCCEEEEECCC-
Confidence 445567877776553221 1 24578899975211 0 0 01112334578999996654
Q ss_pred CCCCCCCCCCch----hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC-
Q 011049 308 IIGEGDKLPNDR----FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT- 382 (494)
Q Consensus 308 ~~g~g~~~~~~~----~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~- 382 (494)
|+|.+..... ...+...|+...++.+ +.+++.++||||||++++.++.++|++++++|..++.....
T Consensus 63 --G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 134 (306)
T TIGR01249 63 --GCGKSTPHACLEENTTWDLVADIEKLREKL------GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREK 134 (306)
T ss_pred --CCCCCCCCCCcccCCHHHHHHHHHHHHHHc------CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHH
Confidence 5665543221 1233444444433332 23679999999999999999999999998888766432100
Q ss_pred ------------CC---------C--CCcc-------------ccc-------ccc---ccc----------------HH
Q 011049 383 ------------LT---------P--FGFQ-------------TEF-------RTL---WEA----------------TN 400 (494)
Q Consensus 383 ------------~~---------~--~~~~-------------~~~-------~~~---~~~----------------~~ 400 (494)
.. . .... ... ... |.. +.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (306)
T TIGR01249 135 EWSWFYEGGASMIYPDAWQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFK 214 (306)
T ss_pred HHHHHHhcchhhhCHHHHHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchH
Confidence 00 0 0000 000 000 000 00
Q ss_pred ---HHHh-----------cC----ccccccCC-CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc
Q 011049 401 ---VYIE-----------MS----PITHANKI-KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461 (494)
Q Consensus 401 ---~~~~-----------~s----p~~~~~~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 461 (494)
.+.. .+ -...+.++ ++|+|++||++|..+| ...+.++++.+. ..+++++++.||.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p--~~~~~~~~~~~~----~~~~~~~~~~gH~ 288 (306)
T TIGR01249 215 FSLAFARLENHYFVNKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCP--LQSAWALHKAFP----EAELKVTNNAGHS 288 (306)
T ss_pred HHHHHHHHHHhHHHHhchhcCchHHHHhhhhccCCCeEEEecCCCCCCC--HHHHHHHHHhCC----CCEEEEECCCCCC
Confidence 0000 00 01234556 5899999999999998 888877777654 3688999999998
Q ss_pred cCCcccHHHHHHHHHHHHHHhc
Q 011049 462 YAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 462 ~~~~~~~~~~~~~~~~fl~~~l 483 (494)
...+ ...+++.+|+..+|
T Consensus 289 ~~~~----~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 289 AFDP----NNLAALVHALETYL 306 (306)
T ss_pred CCCh----HHHHHHHHHHHHhC
Confidence 7532 45677777777654
No 86
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.55 E-value=4.8e-13 Score=128.64 Aligned_cols=185 Identities=17% Similarity=0.073 Sum_probs=119.9
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 367 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~ 367 (494)
..+..|+++||.|+.+|.+ |.|.+.....+.+....|+.++++++.++. ..+++.++|||+||.+++.++..+|+
T Consensus 85 ~~~~~L~~~G~~V~~~D~~---g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~--~~~~i~lvGhS~GG~i~~~~~~~~~~ 159 (350)
T TIGR01836 85 SLVRGLLERGQDVYLIDWG---YPDRADRYLTLDDYINGYIDKCVDYICRTS--KLDQISLLGICQGGTFSLCYAALYPD 159 (350)
T ss_pred hHHHHHHHCCCeEEEEeCC---CCCHHHhcCCHHHHHHHHHHHHHHHHHHHh--CCCcccEEEECHHHHHHHHHHHhCch
Confidence 4566889999999996654 334332222222223355888899998864 24689999999999999999999999
Q ss_pred ceeEEEeCCCCCCCCCCCCC-------------------cccc-----------ccccc----------ccHH---HHH-
Q 011049 368 LFCCGIARSGSYNKTLTPFG-------------------FQTE-----------FRTLW----------EATN---VYI- 403 (494)
Q Consensus 368 ~~~a~v~~~~~~~~~~~~~~-------------------~~~~-----------~~~~~----------~~~~---~~~- 403 (494)
+++++|+.++..+....... +... ....| .+++ .|.
T Consensus 160 ~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (350)
T TIGR01836 160 KIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLR 239 (350)
T ss_pred heeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHH
Confidence 99999998887653211000 0000 00000 0110 000
Q ss_pred -----hcC-c-----------------------------cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCC
Q 011049 404 -----EMS-P-----------------------------ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGA 448 (494)
Q Consensus 404 -----~~s-p-----------------------------~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~ 448 (494)
... + ...+.++++|+|+++|++|..+| +..+..+++.+.. .
T Consensus 240 ~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~--~~~~~~~~~~~~~--~ 315 (350)
T TIGR01836 240 MEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVP--PDASKALNDLVSS--E 315 (350)
T ss_pred HHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCC--HHHHHHHHHHcCC--C
Confidence 000 0 01245678999999999999988 8888888887654 4
Q ss_pred cEEEEEcCCCCCcc-CC-cccHHHHHHHHHHHHHHh
Q 011049 449 LSRLVLLPFEHHVY-AA-RENVMHVIWETDRWLQKY 482 (494)
Q Consensus 449 ~~~~~~~~~~~H~~-~~-~~~~~~~~~~~~~fl~~~ 482 (494)
+.++.++++ +|.. .. .......+..+.+||.++
T Consensus 316 ~~~~~~~~~-gH~~~~~~~~~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 316 DYTELSFPG-GHIGIYVSGKAQKEVPPAIGKWLQAR 350 (350)
T ss_pred CeEEEEcCC-CCEEEEECchhHhhhhHHHHHHHHhC
Confidence 568888885 6653 32 233578889999999763
No 87
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.55 E-value=1.8e-13 Score=112.08 Aligned_cols=201 Identities=18% Similarity=0.250 Sum_probs=129.9
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
..+.+...-| ++.+. +.|.+ ....|+.|.+|..|- ..|+.+ .......+..|..+||+++.+|
T Consensus 5 ~~v~i~Gp~G-~le~~-~~~~~-----~~~~~iAli~HPHPl--------~gGtm~--nkvv~~la~~l~~~G~atlRfN 67 (210)
T COG2945 5 PTVIINGPAG-RLEGR-YEPAK-----TPAAPIALICHPHPL--------FGGTMN--NKVVQTLARALVKRGFATLRFN 67 (210)
T ss_pred CcEEecCCcc-cceec-cCCCC-----CCCCceEEecCCCcc--------ccCccC--CHHHHHHHHHHHhCCceEEeec
Confidence 4455555544 44443 33433 123788998887552 222221 1122234557788999999988
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC
Q 011049 305 SIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 305 ~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~ 384 (494)
+|+..+..+++.+ +-...+|+.++++|+.++.. +..-..+.|+|+|+++++.++.+.|+. ...++..|..+. .
T Consensus 68 fRgVG~S~G~fD~---GiGE~~Da~aaldW~~~~hp-~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~~--~ 140 (210)
T COG2945 68 FRGVGRSQGEFDN---GIGELEDAAAALDWLQARHP-DSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPINA--Y 140 (210)
T ss_pred ccccccccCcccC---CcchHHHHHHHHHHHHhhCC-CchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCCc--h
Confidence 8765444333322 23457899999999998753 323347899999999999999999653 566666666541 0
Q ss_pred CCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCC
Q 011049 385 PFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAA 464 (494)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 464 (494)
. ..++.....|.++++|+.|..++ .....+..+ +.+.++++.++++|.|..
T Consensus 141 d----------------------fs~l~P~P~~~lvi~g~~Ddvv~--l~~~l~~~~-----~~~~~~i~i~~a~HFF~g 191 (210)
T COG2945 141 D----------------------FSFLAPCPSPGLVIQGDADDVVD--LVAVLKWQE-----SIKITVITIPGADHFFHG 191 (210)
T ss_pred h----------------------hhhccCCCCCceeEecChhhhhc--HHHHHHhhc-----CCCCceEEecCCCceecc
Confidence 0 01233456899999999999886 554433333 366789999999999874
Q ss_pred cccHHHHHHHHHHHHH
Q 011049 465 RENVMHVIWETDRWLQ 480 (494)
Q Consensus 465 ~~~~~~~~~~~~~fl~ 480 (494)
......+.+.+|+.
T Consensus 192 --Kl~~l~~~i~~~l~ 205 (210)
T COG2945 192 --KLIELRDTIADFLE 205 (210)
T ss_pred --cHHHHHHHHHHHhh
Confidence 34466667788874
No 88
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.55 E-value=1.6e-13 Score=128.54 Aligned_cols=195 Identities=18% Similarity=0.181 Sum_probs=114.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc-----hhHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-----RFVEQLVSSAE 329 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~-----~~~~~~~~d~~ 329 (494)
.|.||++||++.++ ..+ .......+.+.||.|+.++.+ |+|.+.... ...+...+|+.
T Consensus 25 ~~~vl~~hG~~g~~-----------~~~---~~~~~~~l~~~g~~vi~~d~~---G~G~s~~~~~~~~~~~~~~~~~~~~ 87 (288)
T TIGR01250 25 KIKLLLLHGGPGMS-----------HEY---LENLRELLKEEGREVIMYDQL---GCGYSDQPDDSDELWTIDYFVDELE 87 (288)
T ss_pred CCeEEEEcCCCCcc-----------HHH---HHHHHHHHHhcCCEEEEEcCC---CCCCCCCCCcccccccHHHHHHHHH
Confidence 47788899964211 011 111222334459999996665 455443221 11334445544
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC---------CCC--ccc-----ccc
Q 011049 330 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT---------PFG--FQT-----EFR 393 (494)
Q Consensus 330 ~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~---------~~~--~~~-----~~~ 393 (494)
+.++.+ +.+++.++|||+||.+++.++..+|++++++|..+++...... ... ... ...
T Consensus 88 ~~~~~~------~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (288)
T TIGR01250 88 EVREKL------GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEAS 161 (288)
T ss_pred HHHHHc------CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhc
Confidence 443322 2356999999999999999999999999999987765321000 000 000 000
Q ss_pred cccccH---------------------------------HHH---------------HhcCccccccCCCCCEEEEecCC
Q 011049 394 TLWEAT---------------------------------NVY---------------IEMSPITHANKIKKPILIIHGEV 425 (494)
Q Consensus 394 ~~~~~~---------------------------------~~~---------------~~~sp~~~~~~~~~P~li~~G~~ 425 (494)
..+.+. ..+ ...+....+.++++|+|+++|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 241 (288)
T TIGR01250 162 GDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEF 241 (288)
T ss_pred cCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCC
Confidence 000000 000 00011123457889999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 426 DDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 426 D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
|. ++ +.....+.+.+. ..+++++++++|.... +....+.+.+.+||+
T Consensus 242 D~-~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 242 DT-MT--PEAAREMQELIA----GSRLVVFPDGSHMTMI-EDPEVYFKLLSDFIR 288 (288)
T ss_pred Cc-cC--HHHHHHHHHhcc----CCeEEEeCCCCCCccc-CCHHHHHHHHHHHhC
Confidence 98 44 566666655443 3578899999998764 567788888888873
No 89
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.54 E-value=4.9e-14 Score=116.33 Aligned_cols=214 Identities=19% Similarity=0.206 Sum_probs=139.6
Q ss_pred CceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC----C
Q 011049 234 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI----I 309 (494)
Q Consensus 234 g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~----~ 309 (494)
+..+..-+|+|+....+++ .|++.++-|- +.+...|..... +.+.-...|++|+.+|..+. .
T Consensus 25 ~c~Mtf~vylPp~a~~~k~--~P~lf~LSGL-----------TCT~~Nfi~Ksg-~qq~As~hgl~vV~PDTSPRG~~v~ 90 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDAPRGKR--CPVLFYLSGL-----------TCTHENFIEKSG-FQQQASKHGLAVVAPDTSPRGVEVA 90 (283)
T ss_pred ccceEEEEecCCCcccCCc--CceEEEecCC-----------cccchhhHhhhh-HHHhHhhcCeEEECCCCCCCccccC
Confidence 4578888999998766665 9999999883 444444543221 12233458999999776432 1
Q ss_pred CCCCCC------------CCchhHH--HHHHHHHH-HHHHHH-HcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEE
Q 011049 310 GEGDKL------------PNDRFVE--QLVSSAEA-AVEEVV-RRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 373 (494)
Q Consensus 310 g~g~~~------------~~~~~~~--~~~~d~~~-~v~~l~-~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v 373 (494)
|..+++ ....|.. .+.+-+.. ..+-|. ..-.+|+.+++|.||||||+-|+-+..+.|.+++.+-
T Consensus 91 g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvS 170 (283)
T KOG3101|consen 91 GDDESWDFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVS 170 (283)
T ss_pred CCcccccccCCceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCccccccee
Confidence 111111 0111211 11111111 112121 1234799999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCC---CCCEEEEecCCCCCCCCCHHH--HHHHHHHHHhCC-
Q 011049 374 ARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKI---KKPILIIHGEVDDKVGLFPMQ--AERFFDALKGHG- 447 (494)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~---~~P~li~~G~~D~~v~~~~~~--~~~~~~~l~~~g- 447 (494)
+++|+.|....+|+-....+-.-++...|...++...+++. ..-+||-+|+.|...+ .| .+.+.++.+...
T Consensus 171 AFAPI~NP~~cpWGqKAf~gYLG~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~---~qLlPe~l~~a~~~~~~ 247 (283)
T KOG3101|consen 171 AFAPICNPINCPWGQKAFTGYLGDNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLA---EQLLPENLLEACKATWQ 247 (283)
T ss_pred ccccccCcccCcchHHHhhcccCCChHHHhhcchHHHHHhcCCCCccEEEecCccchhhh---hhcChHHHHHHhhcccc
Confidence 99999999888887554444444566777777776655554 4559999999998752 22 245555555433
Q ss_pred CcEEEEEcCCCCCccCC
Q 011049 448 ALSRLVLLPFEHHVYAA 464 (494)
Q Consensus 448 ~~~~~~~~~~~~H~~~~ 464 (494)
.++.+..-++-.|.+..
T Consensus 248 ~~v~~r~~~gyDHSYyf 264 (283)
T KOG3101|consen 248 APVVFRLQEGYDHSYYF 264 (283)
T ss_pred ccEEEEeecCCCcceee
Confidence 67888889999998653
No 90
>PRK06489 hypothetical protein; Provisional
Probab=99.54 E-value=4.9e-13 Score=129.15 Aligned_cols=173 Identities=18% Similarity=0.244 Sum_probs=105.1
Q ss_pred hCCeEEEeCCCCCCCCCCCCCCCc--------h-hHHHHHHHHHHHHHHHHHcCCCCCCcEE-EEecChHHHHHHHHHHh
Q 011049 295 ARRFAVLAGPSIPIIGEGDKLPND--------R-FVEQLVSSAEAAVEEVVRRGVADPSRIA-VGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 295 ~~G~~v~~~~~~~~~g~g~~~~~~--------~-~~~~~~~d~~~~v~~l~~~~~~d~~ri~-i~G~S~GG~~a~~~~~~ 364 (494)
+++|.|+++|.+ |+|.+.... . ..++.++|+.+. +.+.- +-+++. |+||||||++++.++.+
T Consensus 103 ~~~~~Via~Dl~---GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~---l~~~l--gi~~~~~lvG~SmGG~vAl~~A~~ 174 (360)
T PRK06489 103 ASKYFIILPDGI---GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRL---VTEGL--GVKHLRLILGTSMGGMHAWMWGEK 174 (360)
T ss_pred ccCCEEEEeCCC---CCCCCCCCCcCCCCCCCcccHHHHHHHHHHH---HHHhc--CCCceeEEEEECHHHHHHHHHHHh
Confidence 678999996655 555553221 1 123333333332 32321 225664 89999999999999999
Q ss_pred CCCceeEEEeCCCCCCCC------C-----------CCC---Cccc-c-c---------------------cccc-cc--
Q 011049 365 APHLFCCGIARSGSYNKT------L-----------TPF---GFQT-E-F---------------------RTLW-EA-- 398 (494)
Q Consensus 365 ~p~~~~a~v~~~~~~~~~------~-----------~~~---~~~~-~-~---------------------~~~~-~~-- 398 (494)
+|++++++|++++..... . ..+ .+.. . . .... ..
T Consensus 175 ~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (360)
T PRK06489 175 YPDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAAD 254 (360)
T ss_pred CchhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHH
Confidence 999999999876542100 0 000 0000 0 0 0000 00
Q ss_pred --------------HHHHH-------hcCccccccCCCCCEEEEecCCCCCCCCCHHHH--HHHHHHHHhCCCcEEEEEc
Q 011049 399 --------------TNVYI-------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQA--ERFFDALKGHGALSRLVLL 455 (494)
Q Consensus 399 --------------~~~~~-------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~--~~~~~~l~~~g~~~~~~~~ 455 (494)
...+. ..+....+.++++|+|+++|++|..+| +..+ +.+.+.+. ..+++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p--~~~~~~~~la~~ip----~a~l~~i 328 (360)
T PRK06489 255 KLVDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNP--PETGVMEAALKRVK----HGRLVLI 328 (360)
T ss_pred HHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccC--hhhHHHHHHHHhCc----CCeEEEE
Confidence 00110 112223466789999999999999987 6654 45555543 3689999
Q ss_pred CCC----CCccCCcccHHHHHHHHHHHHHHhc
Q 011049 456 PFE----HHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 456 ~~~----~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
+++ ||... +..+.+.+.+.+||+++-
T Consensus 329 ~~a~~~~GH~~~--e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 329 PASPETRGHGTT--GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred CCCCCCCCcccc--cCHHHHHHHHHHHHHhcc
Confidence 996 99874 578888899999998653
No 91
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.54 E-value=2.4e-13 Score=134.18 Aligned_cols=149 Identities=15% Similarity=0.137 Sum_probs=112.6
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
...||++|. +|..++.||.+......|+|||||+.|+|.+..++ ..+||+.++.++ +.++++...+.. .
T Consensus 183 ~~~i~i~d~---dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~-~~~i~i~dl~tg--~~~~l~~~~g~~-----~ 251 (429)
T PRK01742 183 PYEVRVADY---DGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFENK-KSQLVVHDLRSG--ARKVVASFRGHN-----G 251 (429)
T ss_pred eEEEEEECC---CCCCceEeccCCCccccceEcCCCCEEEEEEecCC-CcEEEEEeCCCC--ceEEEecCCCcc-----C
Confidence 368999999 88888889988877889999999999999987554 678999999887 777777655433 3
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.+. |||||++|++.... .....||++|+++++.++++..... ...+.|
T Consensus 252 ~~~--wSPDG~~La~~~~~------------------~g~~~Iy~~d~~~~~~~~lt~~~~~------------~~~~~w 299 (429)
T PRK01742 252 APA--FSPDGSRLAFASSK------------------DGVLNIYVMGANGGTPSQLTSGAGN------------NTEPSW 299 (429)
T ss_pred cee--ECCCCCEEEEEEec------------------CCcEEEEEEECCCCCeEeeccCCCC------------cCCEEE
Confidence 344 99999999997631 1123599999999888777654321 234689
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEe
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~l 209 (494)
+|||+.+++... ....++||.++..++..+.+
T Consensus 300 SpDG~~i~f~s~-~~g~~~I~~~~~~~~~~~~l 331 (429)
T PRK01742 300 SPDGQSILFTSD-RSGSPQVYRMSASGGGASLV 331 (429)
T ss_pred CCCCCEEEEEEC-CCCCceEEEEECCCCCeEEe
Confidence 999999888654 33446899998877665554
No 92
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.54 E-value=7.2e-13 Score=116.43 Aligned_cols=231 Identities=18% Similarity=0.170 Sum_probs=139.7
Q ss_pred EEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCC
Q 011049 227 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI 306 (494)
Q Consensus 227 ~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 306 (494)
.++. .+|.+.+++||.|++...+ .|+||++||+..+ ..++.+.+ .|+ ......||.|+.++..
T Consensus 38 ~s~~-~~g~~r~y~l~vP~g~~~~----apLvv~LHG~~~s---gag~~~~s--g~d-------~lAd~~gFlV~yPdg~ 100 (312)
T COG3509 38 ASFD-VNGLKRSYRLYVPPGLPSG----APLVVVLHGSGGS---GAGQLHGT--GWD-------ALADREGFLVAYPDGY 100 (312)
T ss_pred cccc-cCCCccceEEEcCCCCCCC----CCEEEEEecCCCC---hHHhhccc--chh-------hhhcccCcEEECcCcc
Confidence 3444 4678999999999986432 4999999997522 22222211 121 1224589999996543
Q ss_pred CCCC----CCCCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC-
Q 011049 307 PIIG----EGDKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY- 379 (494)
Q Consensus 307 ~~~g----~g~~~~~~--~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~- 379 (494)
+..- .+..+... .-.-+.+..+.+++..|+.+..||+.||+|.|.|.||.|+..+++.+|++|.++..+++..
T Consensus 101 ~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~ 180 (312)
T COG3509 101 DRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLA 180 (312)
T ss_pred ccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccC
Confidence 3211 11111111 1123557788899999999999999999999999999999999999999999999888864
Q ss_pred CCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHH---------------
Q 011049 380 NKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK--------------- 444 (494)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~--------------- 444 (494)
+-.... ... +-.-...--..+|..--..=..| |.+|..|..|+ ..+..+..+.+-
T Consensus 181 ~~~a~~----~~r--p~~~m~~~G~~Dp~~p~~gG~~~--~g~g~~~~~v~--~~~~~~~Waa~ng~~~~p~~~~~~~~~ 250 (312)
T COG3509 181 LGVACT----PPR--PVSVMAFHGTADPLNPYHGGGVP--IGRGQRDGVVS--AADLAARWAAVNGCQAGPDTAELPDVG 250 (312)
T ss_pred CCcccC----CCC--chhHHHhcCCCCCCCCCCCCCcc--ccccccccccc--HHHHHHHHHHhcCCCCCCcccccCCCc
Confidence 211000 000 00000000011221111111123 77788887765 455444444442
Q ss_pred --------hCCCcEEEEEcCCCCCccCCcccH-----------HHHHHHHHHHHHHhcC
Q 011049 445 --------GHGALSRLVLLPFEHHVYAARENV-----------MHVIWETDRWLQKYCL 484 (494)
Q Consensus 445 --------~~g~~~~~~~~~~~~H~~~~~~~~-----------~~~~~~~~~fl~~~l~ 484 (494)
+.+.++++..+.+.||.+...... .+.-++|.+||..|-.
T Consensus 251 ~~~~~~~~~~~~~V~~y~i~g~GH~wp~~~~~~~~~~g~~t~~~dat~~iw~Ff~~~~R 309 (312)
T COG3509 251 DGTDYDTCDGNARVELYTIDGGGHTWPGGTQYGPAALGMSTRGFDATERIWRFFRQHRR 309 (312)
T ss_pred ccceeeccCCCcceEEEEEeCCcccCcCCCCCCcccccccccCcchHHHHHHHHHhccc
Confidence 122357889999999987532211 2456788999987743
No 93
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.53 E-value=2.5e-12 Score=116.54 Aligned_cols=208 Identities=13% Similarity=0.065 Sum_probs=128.2
Q ss_pred EEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCC
Q 011049 226 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 305 (494)
Q Consensus 226 ~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~ 305 (494)
.+.+++..| .+.++++.|.+ ..+.|+||++||.+.. ...+.......+..|+++||.|+.+|+
T Consensus 2 ~~~l~~~~g-~~~~~~~~p~~-----~~~~~~VlllHG~g~~-----------~~~~~~~~~~la~~La~~Gy~Vl~~Dl 64 (266)
T TIGR03101 2 PFFLDAPHG-FRFCLYHPPVA-----VGPRGVVIYLPPFAEE-----------MNKSRRMVALQARAFAAGGFGVLQIDL 64 (266)
T ss_pred CEEecCCCC-cEEEEEecCCC-----CCCceEEEEECCCccc-----------ccchhHHHHHHHHHHHHCCCEEEEECC
Confidence 355666666 46687887765 2236899999985311 011111112235577889999999666
Q ss_pred CCCCCCCCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC
Q 011049 306 IPIIGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 383 (494)
Q Consensus 306 ~~~~g~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~ 383 (494)
+ |+|.+.. .........+|+..+++++.+.+ ..+++++|+|+||.+++.++.++|+.++++|+.+|+.+-..
T Consensus 65 ~---G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~ 138 (266)
T TIGR03101 65 Y---GCGDSAGDFAAARWDVWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQ 138 (266)
T ss_pred C---CCCCCCCccccCCHHHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHH
Confidence 5 4554422 12223566789999999998764 36899999999999999999999999999999999765211
Q ss_pred CCCC---------------------ccccc-cc------ccc----cHHHHHhcCccccccCCCCCEEEEecCCCCCCCC
Q 011049 384 TPFG---------------------FQTEF-RT------LWE----ATNVYIEMSPITHANKIKKPILIIHGEVDDKVGL 431 (494)
Q Consensus 384 ~~~~---------------------~~~~~-~~------~~~----~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~ 431 (494)
.... ..... .. -+. ....+...+....... ..++|++.-+-+.--+
T Consensus 139 ~l~~~lrl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~~- 216 (266)
T TIGR03101 139 QLQQFLRLRLVARRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPK-NCPVHWFEVRPEEGAT- 216 (266)
T ss_pred HHHHHHHHHHHHHhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCC-CCceEEEEeccccCCC-
Confidence 0000 00000 00 000 0111222221111111 4567777664322111
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 011049 432 FPMQAERFFDALKGHGALSRLVLLPFE 458 (494)
Q Consensus 432 ~~~~~~~~~~~l~~~g~~~~~~~~~~~ 458 (494)
.......+.+++++.|+.++...|++.
T Consensus 217 ~~~~~~~l~~~~~~~g~~v~~~~~~~~ 243 (266)
T TIGR03101 217 LSPVFSRLGEQWVQSGVEVTVDLVPGP 243 (266)
T ss_pred CCHHHHHHHHHHHHcCCeEeeeecCCc
Confidence 145677999999999999999999997
No 94
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.53 E-value=2.4e-13 Score=123.96 Aligned_cols=189 Identities=15% Similarity=0.100 Sum_probs=113.6
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEV 335 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l 335 (494)
|.||++||.+. +...|. ..... ...+|.|++++.+ |+|.+...... ++...++.+
T Consensus 5 ~~iv~~HG~~~-----------~~~~~~----~~~~~-l~~~~~vi~~d~~---G~G~s~~~~~~------~~~~~~~~~ 59 (245)
T TIGR01738 5 VHLVLIHGWGM-----------NAEVFR----CLDEE-LSAHFTLHLVDLP---GHGRSRGFGPL------SLADAAEAI 59 (245)
T ss_pred ceEEEEcCCCC-----------chhhHH----HHHHh-hccCeEEEEecCC---cCccCCCCCCc------CHHHHHHHH
Confidence 78999999642 111121 12223 3467999996654 55554322111 122223333
Q ss_pred HHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC-CCC--Ccc------------ccc--------
Q 011049 336 VRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL-TPF--GFQ------------TEF-------- 392 (494)
Q Consensus 336 ~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~-~~~--~~~------------~~~-------- 392 (494)
.+.. .+++.++|||+||++++.++.++|++++++|++++...... ..+ ... ...
T Consensus 60 ~~~~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (245)
T TIGR01738 60 AAQA---PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFL 136 (245)
T ss_pred HHhC---CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHH
Confidence 3322 26899999999999999999999999999998765432100 000 000 000
Q ss_pred -----ccccccH-----------------H-------HHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHH
Q 011049 393 -----RTLWEAT-----------------N-------VYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDAL 443 (494)
Q Consensus 393 -----~~~~~~~-----------------~-------~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l 443 (494)
....... . .+...+....+.++++|+|+++|++|..+| ....+.+.+.+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~--~~~~~~~~~~~ 214 (245)
T TIGR01738 137 ALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVP--AKVVPYLDKLA 214 (245)
T ss_pred HHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccC--HHHHHHHHHhC
Confidence 0000000 0 001111223456889999999999999987 77766665554
Q ss_pred HhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 444 KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 444 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
. ++++.+++++||.... +....+.+.+.+|+
T Consensus 215 ~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fi 245 (245)
T TIGR01738 215 P----HSELYIFAKAAHAPFL-SHAEAFCALLVAFK 245 (245)
T ss_pred C----CCeEEEeCCCCCCccc-cCHHHHHHHHHhhC
Confidence 3 4688999999998764 67778888888874
No 95
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.52 E-value=4.1e-13 Score=130.85 Aligned_cols=192 Identities=17% Similarity=0.093 Sum_probs=113.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCC--CchhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP--NDRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~--~~~~~~~~~~d~~~~v 332 (494)
.|.||++||.+. +...|. ... ..+.++|.|+.++.+ |+|.+.. .........+++...+
T Consensus 131 ~~~vl~~HG~~~-----------~~~~~~----~~~-~~l~~~~~v~~~d~~---g~G~s~~~~~~~~~~~~~~~~~~~~ 191 (371)
T PRK14875 131 GTPVVLIHGFGG-----------DLNNWL----FNH-AALAAGRPVIALDLP---GHGASSKAVGAGSLDELAAAVLAFL 191 (371)
T ss_pred CCeEEEECCCCC-----------ccchHH----HHH-HHHhcCCEEEEEcCC---CCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 578999998541 111121 122 234466999996654 4554421 2222334444443333
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcc----c----c-------------
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQ----T----E------------- 391 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~----~----~------------- 391 (494)
+. ++..++.++|||+||++++.++..+|++++++|+.+|..........+. . .
T Consensus 192 ----~~--~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (371)
T PRK14875 192 ----DA--LGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADP 265 (371)
T ss_pred ----Hh--cCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcCh
Confidence 32 3457899999999999999999999999999998877532110000000 0 0
Q ss_pred cccccc------------c-HHHHH------------hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhC
Q 011049 392 FRTLWE------------A-TNVYI------------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGH 446 (494)
Q Consensus 392 ~~~~~~------------~-~~~~~------------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~ 446 (494)
....+. . ...+. ..+....+.++++|+|+++|++|..+| +.++..+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp--~~~~~~l~------ 337 (371)
T PRK14875 266 ALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIP--AAHAQGLP------ 337 (371)
T ss_pred hhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccC--HHHHhhcc------
Confidence 000000 0 00000 011222456789999999999999987 76654332
Q ss_pred CCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 447 GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 447 g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
..+++.+++++||.... +....+.+.+.+||++
T Consensus 338 -~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 338 -DGVAVHVLPGAGHMPQM-EAAADVNRLLAEFLGK 370 (371)
T ss_pred -CCCeEEEeCCCCCChhh-hCHHHHHHHHHHHhcc
Confidence 24688999999998663 5666777777788764
No 96
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.52 E-value=9.2e-14 Score=116.57 Aligned_cols=166 Identities=20% Similarity=0.269 Sum_probs=122.9
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCC---CCCCCchhH-----HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHH
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEG---DKLPNDRFV-----EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTA 359 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g---~~~~~~~~~-----~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~ 359 (494)
..+..++..||.|+.||.+...-.. .......|. +....|+...++||..++ ++.+|+++|+++||-.+.
T Consensus 58 ~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak~vv 135 (242)
T KOG3043|consen 58 EGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGAKVVV 135 (242)
T ss_pred HHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC--CcceeeEEEEeecceEEE
Confidence 3455778899999998875321111 111112222 234678899999999776 468999999999999999
Q ss_pred HHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHH
Q 011049 360 HLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERF 439 (494)
Q Consensus 360 ~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~ 439 (494)
.+....| .|.++++..|..- | ...+.++++|+|++.++.|..+| +....++
T Consensus 136 ~~~~~~~-~f~a~v~~hps~~-------------------------d-~~D~~~vk~Pilfl~ae~D~~~p--~~~v~~~ 186 (242)
T KOG3043|consen 136 TLSAKDP-EFDAGVSFHPSFV-------------------------D-SADIANVKAPILFLFAELDEDVP--PKDVKAW 186 (242)
T ss_pred Eeeccch-hheeeeEecCCcC-------------------------C-hhHHhcCCCCEEEEeecccccCC--HHHHHHH
Confidence 8888875 8999998888421 1 23456788999999999999998 8888888
Q ss_pred HHHHHhCC-CcEEEEEcCCCCCccCC-------cc---cHHHHHHHHHHHHHHhcC
Q 011049 440 FDALKGHG-ALSRLVLLPFEHHVYAA-------RE---NVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 440 ~~~l~~~g-~~~~~~~~~~~~H~~~~-------~~---~~~~~~~~~~~fl~~~l~ 484 (494)
-++|++.. ...++.+|++.+|+|.. ++ ..+..++.++.||.+++.
T Consensus 187 ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~~ 242 (242)
T KOG3043|consen 187 EEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYLA 242 (242)
T ss_pred HHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhhC
Confidence 88888753 23579999999999863 11 224678899999999874
No 97
>PRK11071 esterase YqiA; Provisional
Probab=99.51 E-value=1.2e-12 Score=113.58 Aligned_cols=177 Identities=11% Similarity=0.030 Sum_probs=105.0
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh--CCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 333 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~ 333 (494)
|.||++||.+ +++..|.. ......+.+ .+|.|++++-+ |++ .+ +.+.+.
T Consensus 2 p~illlHGf~-----------ss~~~~~~--~~~~~~l~~~~~~~~v~~~dl~---g~~---------~~----~~~~l~ 52 (190)
T PRK11071 2 STLLYLHGFN-----------SSPRSAKA--TLLKNWLAQHHPDIEMIVPQLP---PYP---------AD----AAELLE 52 (190)
T ss_pred CeEEEECCCC-----------CCcchHHH--HHHHHHHHHhCCCCeEEeCCCC---CCH---------HH----HHHHHH
Confidence 6799999954 22222211 011223444 37999885553 331 22 233344
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC-----CCCccccccccccc-HH---HHHh
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-----PFGFQTEFRTLWEA-TN---VYIE 404 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~---~~~~ 404 (494)
.+.++. +.+++.++|+|+||++++.++.++|. + +|.++|..+.... ...........+.. .+ ....
T Consensus 53 ~l~~~~--~~~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 127 (190)
T PRK11071 53 SLVLEH--GGDPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKV 127 (190)
T ss_pred HHHHHc--CCCCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHh
Confidence 444432 23689999999999999999999983 3 4667776552000 00000000001111 11 1222
Q ss_pred cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 405 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 405 ~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
..+.. +. ...|++++||++|..|| +..+.++++. +++.+++|++|.+... +.+.+.+.+|+.
T Consensus 128 ~~~~~-i~-~~~~v~iihg~~De~V~--~~~a~~~~~~-------~~~~~~~ggdH~f~~~---~~~~~~i~~fl~ 189 (190)
T PRK11071 128 MQIDP-LE-SPDLIWLLQQTGDEVLD--YRQAVAYYAA-------CRQTVEEGGNHAFVGF---ERYFNQIVDFLG 189 (190)
T ss_pred cCCcc-CC-ChhhEEEEEeCCCCcCC--HHHHHHHHHh-------cceEEECCCCcchhhH---HHhHHHHHHHhc
Confidence 22222 22 56788999999999998 9999988884 3566779999998543 677888888874
No 98
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.50 E-value=6.6e-13 Score=128.76 Aligned_cols=217 Identities=20% Similarity=0.240 Sum_probs=142.0
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
+....+.++.+||++|...+|+|++ .++.|+++..+-.|+.... +... ...........|+.+||+|+
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~-----~g~~Pvll~~~~~Py~k~~------~~~~-~~~~~~p~~~~~aa~GYavV 84 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAG-----AGPLPVLLSRTRLPYRKRN------GTFG-PQLSALPQPAWFAAQGYAVV 84 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCC-----CCCCceeEEeecccccccc------ccCc-chhhcccccceeecCceEEE
Confidence 4456788899999999999999997 3559999998844433221 0000 00000011126799999999
Q ss_pred eCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 302 AGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
..|.||. +.++... .+..+..+|-.+.|+|+.++++.+ .+|+++|.||+|+..+++|+..|.-.||++..++..|
T Consensus 85 ~qDvRG~---~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 85 NQDVRGR---GGSEGVFDPESSREAEDGYDTIEWLAKQPWSN-GNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred Eeccccc---ccCCcccceeccccccchhHHHHHHHhCCccC-CeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 9666654 4443321 122246788899999999999876 7899999999999999999999888999999888766
Q ss_pred CCCC--------------CCCc-----------cc-----------------------cccccccc--------H-HHHH
Q 011049 381 KTLT--------------PFGF-----------QT-----------------------EFRTLWEA--------T-NVYI 403 (494)
Q Consensus 381 ~~~~--------------~~~~-----------~~-----------------------~~~~~~~~--------~-~~~~ 403 (494)
.... .|.. .. ....+|.. . ..|.
T Consensus 161 ~y~d~~~~~G~~~~~~~~~W~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~~~~~~hp~~ddfW~ 240 (563)
T COG2936 161 RYRDDAFYGGGAELNFNLGWALTMLAPQPLTRIRPARLDRLAPLRVGAERWRDAPTELLEGEPYFLELWLEHPLRDDFWR 240 (563)
T ss_pred ccccccccCcchhhhhhHHHHhhhcccCcccccccccccccchhhhhhccccccccchhccCcccchhhhcCCCccchhh
Confidence 2100 0000 00 00011110 0 1233
Q ss_pred hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc
Q 011049 404 EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461 (494)
Q Consensus 404 ~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 461 (494)
+.+-....+++++|+|.+.|-.|.. ...+.+++..++.. +..+++-|- .|.
T Consensus 241 ~~~~~~d~~~i~vP~L~i~gW~D~~----l~~~~~~~~~~~~r--~~~lvvgPw-~H~ 291 (563)
T COG2936 241 RGDRVADLSKIKVPALVIGGWSDGY----LHTAIKLFAFLRSR--PVKLVVGPW-THG 291 (563)
T ss_pred ccCcccccccCCCcEEEEccccccc----ccchHHHhhhcccC--CceeEEccc-ccC
Confidence 3455566788999999999999975 34566788888775 344555443 454
No 99
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.50 E-value=1.6e-12 Score=116.38 Aligned_cols=232 Identities=18% Similarity=0.174 Sum_probs=141.4
Q ss_pred EEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCC
Q 011049 226 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 305 (494)
Q Consensus 226 ~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~ 305 (494)
...++..||..+......++. ..+ .|+||.+||-. |+. .+.+.......+.++||.|++.+.
T Consensus 51 re~v~~pdg~~~~ldw~~~p~---~~~--~P~vVl~HGL~-----------G~s--~s~y~r~L~~~~~~rg~~~Vv~~~ 112 (345)
T COG0429 51 RERLETPDGGFIDLDWSEDPR---AAK--KPLVVLFHGLE-----------GSS--NSPYARGLMRALSRRGWLVVVFHF 112 (345)
T ss_pred eEEEEcCCCCEEEEeeccCcc---ccC--CceEEEEeccC-----------CCC--cCHHHHHHHHHHHhcCCeEEEEec
Confidence 335566787666666665432 112 69999999942 322 112223344566789999999777
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHH-HHHHHHHHhCCC-ceeEEEeCCCCCCCCC
Q 011049 306 IPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGA-FMTAHLLAHAPH-LFCCGIARSGSYNKTL 383 (494)
Q Consensus 306 ~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG-~~a~~~~~~~p~-~~~a~v~~~~~~~~~~ 383 (494)
|+..|.-... ..-+.....+|+..+++++.++.. +.++..+|.|+|| +++.+++...-+ ...|+++++..+|...
T Consensus 113 Rgcs~~~n~~-p~~yh~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~ 189 (345)
T COG0429 113 RGCSGEANTS-PRLYHSGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEA 189 (345)
T ss_pred ccccCCcccC-cceecccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHH
Confidence 7654432221 122233346899999999998764 5789999999999 555555544322 3455555554333100
Q ss_pred ------CCCC--c------------------------c-------ccccccc--------------ccHHHHHhcCcccc
Q 011049 384 ------TPFG--F------------------------Q-------TEFRTLW--------------EATNVYIEMSPITH 410 (494)
Q Consensus 384 ------~~~~--~------------------------~-------~~~~~~~--------------~~~~~~~~~sp~~~ 410 (494)
..+. + . ...++.| +..+.|.+.|.+..
T Consensus 190 ~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~ 269 (345)
T COG0429 190 CAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPL 269 (345)
T ss_pred HHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhcccccc
Confidence 0000 0 0 0001111 12356788899999
Q ss_pred ccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHh-CCCcEEEEEcCCCCCc-cCC-cc-cHH-HHHHHHHHHHHHhcC
Q 011049 411 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKG-HGALSRLVLLPFEHHV-YAA-RE-NVM-HVIWETDRWLQKYCL 484 (494)
Q Consensus 411 ~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~H~-~~~-~~-~~~-~~~~~~~~fl~~~l~ 484 (494)
+.+|.+|+||||..+|+.++ ... .-.++. .+..+.+.+-+..||. +.. .. +.. -.-+++.+||+..+.
T Consensus 270 L~~Ir~PtLii~A~DDP~~~--~~~----iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 270 LPKIRKPTLIINAKDDPFMP--PEV----IPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred ccccccceEEEecCCCCCCC--hhh----CCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 99999999999999999986 322 222222 4567899999999996 322 22 122 233468999998765
No 100
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.49 E-value=6.6e-13 Score=122.22 Aligned_cols=190 Identities=12% Similarity=0.053 Sum_probs=112.6
Q ss_pred cEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 011049 256 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEV 335 (494)
Q Consensus 256 P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l 335 (494)
|.||++||.+.+ ...|. .....| +..|.|+++|.+ |+|.+.....+ ..++ .++.+
T Consensus 14 ~~ivllHG~~~~-----------~~~w~----~~~~~L-~~~~~vi~~Dl~---G~G~S~~~~~~---~~~~---~~~~l 68 (256)
T PRK10349 14 VHLVLLHGWGLN-----------AEVWR----CIDEEL-SSHFTLHLVDLP---GFGRSRGFGAL---SLAD---MAEAV 68 (256)
T ss_pred CeEEEECCCCCC-----------hhHHH----HHHHHH-hcCCEEEEecCC---CCCCCCCCCCC---CHHH---HHHHH
Confidence 569999996521 11221 223344 456999995554 55555322211 1122 22233
Q ss_pred HHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC--C-CCCCCc-----------cccccc---cc--
Q 011049 336 VRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK--T-LTPFGF-----------QTEFRT---LW-- 396 (494)
Q Consensus 336 ~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~--~-~~~~~~-----------~~~~~~---~~-- 396 (494)
.+.. .+++.++|||+||++++.++.++|++++.+|.+++.... . ...... ...... .+
T Consensus 69 ~~~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (256)
T PRK10349 69 LQQA---PDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLA 145 (256)
T ss_pred HhcC---CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHH
Confidence 3332 378999999999999999999999999999987653211 0 000000 000000 00
Q ss_pred ------c--c-----------------H-------HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHH
Q 011049 397 ------E--A-----------------T-------NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALK 444 (494)
Q Consensus 397 ------~--~-----------------~-------~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~ 444 (494)
. . . ..+...+....+.++++|+|+++|++|..+| ...+..+.+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~--~~~~~~~~~~i- 222 (256)
T PRK10349 146 LQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVP--RKVVPMLDKLW- 222 (256)
T ss_pred HHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCC--HHHHHHHHHhC-
Confidence 0 0 0 0011122233466789999999999999987 66555444444
Q ss_pred hCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 445 GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 445 ~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
...++.+++++||.... +....+.+.+.+|-.
T Consensus 223 ---~~~~~~~i~~~gH~~~~-e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 223 ---PHSESYIFAKAAHAPFI-SHPAEFCHLLVALKQ 254 (256)
T ss_pred ---CCCeEEEeCCCCCCccc-cCHHHHHHHHHHHhc
Confidence 34689999999998774 777788888777643
No 101
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.49 E-value=4.1e-12 Score=118.63 Aligned_cols=196 Identities=14% Similarity=0.092 Sum_probs=111.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 334 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~ 334 (494)
.|.||++||.+.. ...|. ... ....++|.|+++|.+ |+|.+...... ....++..+.+..
T Consensus 34 ~~~iv~lHG~~~~-----------~~~~~----~~~-~~l~~~~~vi~~D~~---G~G~S~~~~~~-~~~~~~~~~~~~~ 93 (286)
T PRK03204 34 GPPILLCHGNPTW-----------SFLYR----DII-VALRDRFRCVAPDYL---GFGLSERPSGF-GYQIDEHARVIGE 93 (286)
T ss_pred CCEEEEECCCCcc-----------HHHHH----HHH-HHHhCCcEEEEECCC---CCCCCCCCCcc-ccCHHHHHHHHHH
Confidence 4779999996411 01121 122 234567999996654 55655332211 1113344444444
Q ss_pred HHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC-CC----------CCC-----c-----ccc--
Q 011049 335 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT-LT----------PFG-----F-----QTE-- 391 (494)
Q Consensus 335 l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~-~~----------~~~-----~-----~~~-- 391 (494)
+++.. +.+++.++|||+||.++..++..+|++++++|..++..-.. .. ... + ...
T Consensus 94 ~~~~~--~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (286)
T PRK03204 94 FVDHL--GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLI 171 (286)
T ss_pred HHHHh--CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhc
Confidence 44432 34679999999999999999999999999999776542100 00 000 0 000
Q ss_pred ---cccccc--cHHHHHh--------------------cCc-ccc----cc--CCCCCEEEEecCCCCCCCCCHH-HHHH
Q 011049 392 ---FRTLWE--ATNVYIE--------------------MSP-ITH----AN--KIKKPILIIHGEVDDKVGLFPM-QAER 438 (494)
Q Consensus 392 ---~~~~~~--~~~~~~~--------------------~sp-~~~----~~--~~~~P~li~~G~~D~~v~~~~~-~~~~ 438 (494)
...... ....+.. ..+ +.. +. .+++|+|+++|++|..++ +. ..+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~--~~~~~~~ 249 (286)
T PRK03204 172 PAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFR--PKTILPR 249 (286)
T ss_pred cccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccC--cHHHHHH
Confidence 000000 0000000 000 000 11 127999999999999875 44 3344
Q ss_pred HHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 439 FFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 439 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
+.+.+. ..++++++++||... .+..+.+.+.+.+||
T Consensus 250 ~~~~ip----~~~~~~i~~aGH~~~-~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 250 LRATFP----DHVLVELPNAKHFIQ-EDAPDRIAAAIIERF 285 (286)
T ss_pred HHHhcC----CCeEEEcCCCccccc-ccCHHHHHHHHHHhc
Confidence 444443 368899999999977 477888888888886
No 102
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.48 E-value=3.3e-12 Score=123.92 Aligned_cols=70 Identities=17% Similarity=0.066 Sum_probs=59.3
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcC-CCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP-FEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
.+.+|++|+|+++|+.|..+| +..++++.+.+...+..+++++++ ++||.... +....+.+.+.+||.+.
T Consensus 304 ~l~~I~~PtLvI~G~~D~~~p--~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~l-e~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 304 ALARIKARFLVVSFTSDWLFP--PARSREIVDALLAAGADVSYAEIDSPYGHDAFL-LDDPRYGRLVRAFLERA 374 (379)
T ss_pred HHhcCCCCEEEEEECCccccC--HHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHh-cCHHHHHHHHHHHHHhh
Confidence 346789999999999999987 999999999998877777888775 89998764 66678888999999875
No 103
>PLN02578 hydrolase
Probab=99.48 E-value=2.5e-12 Score=123.84 Aligned_cols=169 Identities=21% Similarity=0.192 Sum_probs=105.4
Q ss_pred hCCeEEEeCCCCCCCCCCCCCCCc--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEE
Q 011049 295 ARRFAVLAGPSIPIIGEGDKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCG 372 (494)
Q Consensus 295 ~~G~~v~~~~~~~~~g~g~~~~~~--~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~ 372 (494)
+++|.|+++|.+ |+|.+.... .......+|+.+.++.+. .+++.++|||+||++++.++.++|++++++
T Consensus 110 ~~~~~v~~~D~~---G~G~S~~~~~~~~~~~~a~~l~~~i~~~~------~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~l 180 (354)
T PLN02578 110 AKKYKVYALDLL---GFGWSDKALIEYDAMVWRDQVADFVKEVV------KEPAVLVGNSLGGFTALSTAVGYPELVAGV 180 (354)
T ss_pred hcCCEEEEECCC---CCCCCCCcccccCHHHHHHHHHHHHHHhc------cCCeEEEEECHHHHHHHHHHHhChHhcceE
Confidence 467999996665 455543321 122334455555555442 367999999999999999999999999999
Q ss_pred EeCCCCCCCCCCC----CC-----------cccc----------------cc----------ccccc-------------
Q 011049 373 IARSGSYNKTLTP----FG-----------FQTE----------------FR----------TLWEA------------- 398 (494)
Q Consensus 373 v~~~~~~~~~~~~----~~-----------~~~~----------------~~----------~~~~~------------- 398 (494)
|++++........ .. +... .. ..+.+
T Consensus 181 vLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (354)
T PLN02578 181 ALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESIT 260 (354)
T ss_pred EEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHH
Confidence 9876542110000 00 0000 00 00000
Q ss_pred --------HHHHH-----------hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCC
Q 011049 399 --------TNVYI-----------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEH 459 (494)
Q Consensus 399 --------~~~~~-----------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 459 (494)
.+.+. ..+....+.++++|+|+++|++|..+| ...+.++.+.+. +.+++++ ++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~--~~~~~~l~~~~p----~a~l~~i-~~G 333 (354)
T PLN02578 261 EPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVG--PAKAEKIKAFYP----DTTLVNL-QAG 333 (354)
T ss_pred hcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCC--HHHHHHHHHhCC----CCEEEEe-CCC
Confidence 00000 011122356789999999999999987 777776666553 3567777 589
Q ss_pred CccCCcccHHHHHHHHHHHHH
Q 011049 460 HVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 460 H~~~~~~~~~~~~~~~~~fl~ 480 (494)
|... .+....+.+.+.+|+.
T Consensus 334 H~~~-~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 334 HCPH-DEVPEQVNKALLEWLS 353 (354)
T ss_pred CCcc-ccCHHHHHHHHHHHHh
Confidence 9876 4777788889999985
No 104
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.47 E-value=9.3e-14 Score=124.94 Aligned_cols=175 Identities=22% Similarity=0.279 Sum_probs=109.1
Q ss_pred EEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC----chhHHHHHHHHHHHHH
Q 011049 258 LFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN----DRFVEQLVSSAEAAVE 333 (494)
Q Consensus 258 vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~----~~~~~~~~~d~~~~v~ 333 (494)
||++||.+.+ ...|. .....| ++||.|++++.+ |+|.+... ....++.++|+.++++
T Consensus 1 vv~~hG~~~~-----------~~~~~----~~~~~l-~~~~~v~~~d~~---G~G~s~~~~~~~~~~~~~~~~~l~~~l~ 61 (228)
T PF12697_consen 1 VVFLHGFGGS-----------SESWD----PLAEAL-ARGYRVIAFDLP---GHGRSDPPPDYSPYSIEDYAEDLAELLD 61 (228)
T ss_dssp EEEE-STTTT-----------GGGGH----HHHHHH-HTTSEEEEEECT---TSTTSSSHSSGSGGSHHHHHHHHHHHHH
T ss_pred eEEECCCCCC-----------HHHHH----HHHHHH-hCCCEEEEEecC---CccccccccccCCcchhhhhhhhhhccc
Confidence 7899997521 11222 244455 589999996654 55555432 2223455566555554
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC--C---C-ccc--------------ccc
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP--F---G-FQT--------------EFR 393 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~--~---~-~~~--------------~~~ 393 (494)
.+ + .+++.++|||+||.+++.++.++|++++++|..+|........ . . +.. ...
T Consensus 62 ~~---~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (228)
T PF12697_consen 62 AL---G---IKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFF 135 (228)
T ss_dssp HT---T---TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc---c---cccccccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccc
Confidence 43 2 2689999999999999999999999999999999876421100 0 0 000 000
Q ss_pred cccccH-----------HH--------HHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEE
Q 011049 394 TLWEAT-----------NV--------YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL 454 (494)
Q Consensus 394 ~~~~~~-----------~~--------~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~ 454 (494)
..+... +. +...+....+.++++|+++++|++|..++ ....+++.+.+ .++++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~--~~~~~~~~~~~----~~~~~~~ 209 (228)
T PF12697_consen 136 YRWFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVP--PESAEELADKL----PNAELVV 209 (228)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSH--HHHHHHHHHHS----TTEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccCCCeEEeecCCCCCCC--HHHHHHHHHHC----CCCEEEE
Confidence 000000 00 11223345667789999999999999986 55555555444 4589999
Q ss_pred cCCCCCccC
Q 011049 455 LPFEHHVYA 463 (494)
Q Consensus 455 ~~~~~H~~~ 463 (494)
+++++|.+.
T Consensus 210 ~~~~gH~~~ 218 (228)
T PF12697_consen 210 IPGAGHFLF 218 (228)
T ss_dssp ETTSSSTHH
T ss_pred ECCCCCccH
Confidence 999999865
No 105
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.47 E-value=4.5e-12 Score=125.17 Aligned_cols=142 Identities=7% Similarity=0.081 Sum_probs=106.1
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.+||++++ .++++++++..+.....|+|||||++|+|.+..++ ..+||+++++++ +.++++...... ..
T Consensus 228 ~~i~i~dl---~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~g-~~~Iy~~d~~~~--~~~~lt~~~~~~-----~~ 296 (429)
T PRK01742 228 SQLVVHDL---RSGARKVVASFRGHNGAPAFSPDGSRLAFASSKDG-VLNIYVMGANGG--TPSQLTSGAGNN-----TE 296 (429)
T ss_pred cEEEEEeC---CCCceEEEecCCCccCceeECCCCCEEEEEEecCC-cEEEEEEECCCC--CeEeeccCCCCc-----CC
Confidence 47999999 88888888877666678999999999999876655 578999999887 778888755433 44
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 177 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s 177 (494)
|. |||||++|+|.+.. ...++||.++..++..+++ ...+ ....||
T Consensus 297 ~~--wSpDG~~i~f~s~~------------------~g~~~I~~~~~~~~~~~~l-~~~~--------------~~~~~S 341 (429)
T PRK01742 297 PS--WSPDGQSILFTSDR------------------SGSPQVYRMSASGGGASLV-GGRG--------------YSAQIS 341 (429)
T ss_pred EE--ECCCCCEEEEEECC------------------CCCceEEEEECCCCCeEEe-cCCC--------------CCccCC
Confidence 55 99999999998631 1234699999888766554 1111 124799
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
|||+.+++... ..++.+++.+++.+.++
T Consensus 342 pDG~~ia~~~~-----~~i~~~Dl~~g~~~~lt 369 (429)
T PRK01742 342 ADGKTLVMING-----DNVVKQDLTSGSTEVLS 369 (429)
T ss_pred CCCCEEEEEcC-----CCEEEEECCCCCeEEec
Confidence 99998887643 35788898888777665
No 106
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.47 E-value=3.9e-14 Score=129.95 Aligned_cols=215 Identities=23% Similarity=0.295 Sum_probs=124.3
Q ss_pred CceEEEEEEeCCCCCCCCCCCCcEEEEecCC-CcCCcccCCcccCCCCccCCCCchhHHHHHhCC----eEEEeCCCCCC
Q 011049 234 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPE-DYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR----FAVLAGPSIPI 308 (494)
Q Consensus 234 g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G----~~v~~~~~~~~ 308 (494)
|..+..++|+|++|++.+ ++|+|+++||. .+.. .+. .......++..| .+++.++..+.
T Consensus 5 g~~~~~~VylP~~y~~~~--~~PvlylldG~~~~~~------------~~~--~~~~~~~~~~~~~~~~~iiV~i~~~~~ 68 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSK--PYPVLYLLDGQSGWFR------------NGN--AQEALDRLIAEGKIPPMIIVVIPNGDN 68 (251)
T ss_dssp TEEEEEEEEECTTGGTTT--TEEEEEEESHTTHHHH------------HHH--HHHHHHHHHHHHTSEEEEEEEEESSST
T ss_pred CCeEEEEEEECCCCCCCC--CCEEEEEccCCccccc------------cch--HHHHHHHHHHhCCCCceEEEEEecccc
Confidence 678999999999985544 49999999992 2100 000 001122334443 33333222121
Q ss_pred C-CCCC-------------CCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEe
Q 011049 309 I-GEGD-------------KLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA 374 (494)
Q Consensus 309 ~-g~g~-------------~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 374 (494)
. .++. ......+.....+ +.+.++.++..+++++.+|+|+|+||+.|+.++.++|+.|.++++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~ 145 (251)
T PF00756_consen 69 SRFYTSWYLPAGSSRRADDSGGGDAYETFLTE---ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIA 145 (251)
T ss_dssp SSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHT---HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEE
T ss_pred cccccccccccccccccccCCCCcccceehhc---cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccc
Confidence 1 0000 0011222333333 445667777767777799999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcccccccccccHHHHHhcCccccc-----cCCCCCEEEEecCCCCCCCC--------CHHHHHHHHH
Q 011049 375 RSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHA-----NKIKKPILIIHGEVDDKVGL--------FPMQAERFFD 441 (494)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~-----~~~~~P~li~~G~~D~~v~~--------~~~~~~~~~~ 441 (494)
++|..+.....|.- ...+.|...++...+ ..-..++++.+|+.|....- ......++.+
T Consensus 146 ~S~~~~~~~~~w~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~ 217 (251)
T PF00756_consen 146 FSGALDPSPSLWGP--------SDDEAWKENDPFDLIKALSQKKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQ 217 (251)
T ss_dssp ESEESETTHCHHHH--------STCGHHGGCHHHHHHHHHHHTTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHH
T ss_pred cCccccccccccCc--------CCcHHhhhccHHHHhhhhhcccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHH
Confidence 99976543111110 011222233333322 22347789999999983210 0123445555
Q ss_pred HHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 442 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 442 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
.|+.++.+..+..+++ +|.+. .+...+...+.||
T Consensus 218 ~l~~~g~~~~~~~~~G-~H~~~---~W~~~l~~~L~~~ 251 (251)
T PF00756_consen 218 LLKAKGIPHTYHVFPG-GHDWA---YWRRRLPDALPWM 251 (251)
T ss_dssp HCCCEECTTESEEEHS-ESSHH---HHHHHHHHHHHHH
T ss_pred HHHHcCCCceEEEecC-ccchh---hHHHHHHHHHhhC
Confidence 5666778888889985 67643 2445555556654
No 107
>PRK07581 hypothetical protein; Validated
Probab=99.47 E-value=8.3e-13 Score=126.76 Aligned_cols=68 Identities=13% Similarity=-0.017 Sum_probs=54.1
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC-CCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF-EHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
.+.++++|+|+++|++|..+| +..++.+.+.+.+ .+++++++ +||.... +....+...+.+||.+.+.
T Consensus 270 ~L~~I~~PtLvI~G~~D~~~p--~~~~~~l~~~ip~----a~l~~i~~~~GH~~~~-~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 270 ALGSITAKTFVMPISTDLYFP--PEDCEAEAALIPN----AELRPIESIWGHLAGF-GQNPADIAFIDAALKELLA 338 (339)
T ss_pred HHhcCCCCEEEEEeCCCCCCC--HHHHHHHHHhCCC----CeEEEeCCCCCccccc-cCcHHHHHHHHHHHHHHHh
Confidence 355688999999999999987 7877777666533 58889998 8997653 5666788889999988764
No 108
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.47 E-value=9.6e-13 Score=126.28 Aligned_cols=175 Identities=17% Similarity=0.111 Sum_probs=110.5
Q ss_pred HHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCc-EEEEecChHHHHHHHHHHhCCCceeE
Q 011049 293 FLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSR-IAVGGHSYGAFMTAHLLAHAPHLFCC 371 (494)
Q Consensus 293 l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~r-i~i~G~S~GG~~a~~~~~~~p~~~~a 371 (494)
|...+|.|+++|.+| +|.+..........++|+.+.++.+ + + ++ +.++||||||++++.++.++|++++.
T Consensus 95 L~~~~~~Vi~~Dl~G---~g~s~~~~~~~~~~a~dl~~ll~~l---~-l--~~~~~lvG~SmGG~vA~~~A~~~P~~V~~ 165 (343)
T PRK08775 95 LDPARFRLLAFDFIG---ADGSLDVPIDTADQADAIALLLDAL---G-I--ARLHAFVGYSYGALVGLQFASRHPARVRT 165 (343)
T ss_pred cCccccEEEEEeCCC---CCCCCCCCCCHHHHHHHHHHHHHHc---C-C--CcceEEEEECHHHHHHHHHHHHChHhhhe
Confidence 335689999977664 4444322222345566766665554 3 2 34 57999999999999999999999999
Q ss_pred EEeCCCCCCCCCCC--CC------------------------------ccc--------cccccc------ccHH-----
Q 011049 372 GIARSGSYNKTLTP--FG------------------------------FQT--------EFRTLW------EATN----- 400 (494)
Q Consensus 372 ~v~~~~~~~~~~~~--~~------------------------------~~~--------~~~~~~------~~~~----- 400 (494)
+|++++........ +. +.. .....+ ....
T Consensus 166 LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 245 (343)
T PRK08775 166 LVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDA 245 (343)
T ss_pred EEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHH
Confidence 99887653210000 00 000 000000 0000
Q ss_pred ----HHHhcCc-------------cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC-CCCcc
Q 011049 401 ----VYIEMSP-------------ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF-EHHVY 462 (494)
Q Consensus 401 ----~~~~~sp-------------~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~-~~H~~ 462 (494)
.....++ ...+.++++|+|+++|+.|..+| +..+.++.+.+. ...++.++++ +||..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p--~~~~~~~~~~i~---p~a~l~~i~~~aGH~~ 320 (343)
T PRK08775 246 AGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVP--LADLVELAEGLG---PRGSLRVLRSPYGHDA 320 (343)
T ss_pred HHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeC--HHHHHHHHHHcC---CCCeEEEEeCCccHHH
Confidence 0000000 11246788999999999999987 787777776663 2368899985 89987
Q ss_pred CCcccHHHHHHHHHHHHHHh
Q 011049 463 AARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 463 ~~~~~~~~~~~~~~~fl~~~ 482 (494)
.. +..+.+.+.+.+||.+.
T Consensus 321 ~l-E~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 321 FL-KETDRIDAILTTALRST 339 (343)
T ss_pred Hh-cCHHHHHHHHHHHHHhc
Confidence 64 67788888999999753
No 109
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.46 E-value=2.2e-12 Score=124.17 Aligned_cols=68 Identities=19% Similarity=0.106 Sum_probs=53.9
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEE-cCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVL-LPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~-~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.+.++++|+|+++|++|..+| +..++++.+.+.+....++++. ++++||.... +..+.+.+.+.+||+
T Consensus 283 ~l~~I~~P~Lvi~G~~D~~~p--~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~l-e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 283 ALSRIKAPFLVVSITSDWLFP--PAESRELAKALPAAGLRVTYVEIESPYGHDAFL-VETDQVEELIRGFLR 351 (351)
T ss_pred HHhhCCCCEEEEEeCCccccC--HHHHHHHHHHHhhcCCceEEEEeCCCCCcchhh-cCHHHHHHHHHHHhC
Confidence 456788999999999999988 8999999999987654444444 5689998764 667788888888873
No 110
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.45 E-value=1.1e-11 Score=118.91 Aligned_cols=193 Identities=15% Similarity=0.126 Sum_probs=119.2
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc------hhHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND------RFVEQLVSSA 328 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~------~~~~~~~~d~ 328 (494)
.|.||++||.+.+. ..|. .....| +.+|.|+++|. .|+|.+.... ...+..++|+
T Consensus 127 ~~~ivllHG~~~~~-----------~~w~----~~~~~L-~~~~~Via~Dl---pG~G~S~~p~~~~~~~ys~~~~a~~l 187 (383)
T PLN03084 127 NPPVLLIHGFPSQA-----------YSYR----KVLPVL-SKNYHAIAFDW---LGFGFSDKPQPGYGFNYTLDEYVSSL 187 (383)
T ss_pred CCeEEEECCCCCCH-----------HHHH----HHHHHH-hcCCEEEEECC---CCCCCCCCCcccccccCCHHHHHHHH
Confidence 47899999965211 1122 223344 46899999555 4566553321 1345556666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC--CCCC-----------------cc
Q 011049 329 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--TPFG-----------------FQ 389 (494)
Q Consensus 329 ~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~--~~~~-----------------~~ 389 (494)
.+.++.+ + .+++.++|+|+||.+++.++.++|++++.+|++++...... .+.. +.
T Consensus 188 ~~~i~~l---~---~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~ 261 (383)
T PLN03084 188 ESLIDEL---K---SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLR 261 (383)
T ss_pred HHHHHHh---C---CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHH
Confidence 6666554 2 35799999999999999999999999999999887642100 0000 00
Q ss_pred -------c--------cc----cccccc----H----HHHHhc-Ccc-------c---cccCCCCCEEEEecCCCCCCCC
Q 011049 390 -------T--------EF----RTLWEA----T----NVYIEM-SPI-------T---HANKIKKPILIIHGEVDDKVGL 431 (494)
Q Consensus 390 -------~--------~~----~~~~~~----~----~~~~~~-sp~-------~---~~~~~~~P~li~~G~~D~~v~~ 431 (494)
. +. ..++.. . ..+... ..+ . ...++++|+|+++|+.|..++
T Consensus 262 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~- 340 (383)
T PLN03084 262 ASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLN- 340 (383)
T ss_pred HHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcC-
Confidence 0 00 000000 0 000000 000 0 013578999999999999987
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 432 FPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 432 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
....+++.+.. +.++.++++++|.+.. +..+.+.+.+.+||.
T Consensus 341 -~~~~~~~a~~~-----~a~l~vIp~aGH~~~~-E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 341 -YDGVEDFCKSS-----QHKLIELPMAGHHVQE-DCGEELGGIISGILS 382 (383)
T ss_pred -HHHHHHHHHhc-----CCeEEEECCCCCCcch-hCHHHHHHHHHHHhh
Confidence 76665555532 4688999999998774 777888888888875
No 111
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.42 E-value=1.8e-11 Score=121.32 Aligned_cols=151 Identities=13% Similarity=0.145 Sum_probs=111.6
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
..+||++|. +++.+++|+........|+|||||+.|+|.+..++ ..+||++++.++ ..+.++...+.. .
T Consensus 169 ~~~l~~~d~---~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~-~~~i~v~d~~~g--~~~~~~~~~~~~-----~ 237 (417)
T TIGR02800 169 RYELQVADY---DGANPQTITRSREPILSPAWSPDGQKLAYVSFESG-KPEIYVQDLATG--QREKVASFPGMN-----G 237 (417)
T ss_pred cceEEEEcC---CCCCCEEeecCCCceecccCCCCCCEEEEEEcCCC-CcEEEEEECCCC--CEEEeecCCCCc-----c
Confidence 447999998 88889999987766778999999999999986654 578999999887 666666544332 2
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
.+. |||||++|+|.... .....||.+|+.+++.+++....+. ...+.|
T Consensus 238 ~~~--~spDg~~l~~~~~~------------------~~~~~i~~~d~~~~~~~~l~~~~~~------------~~~~~~ 285 (417)
T TIGR02800 238 APA--FSPDGSKLAVSLSK------------------DGNPDIYVMDLDGKQLTRLTNGPGI------------DTEPSW 285 (417)
T ss_pred ceE--ECCCCCEEEEEECC------------------CCCccEEEEECCCCCEEECCCCCCC------------CCCEEE
Confidence 333 99999999997631 1223599999999887776543321 123578
Q ss_pred cccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 177 NLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 177 s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
++||+++++..... ..+++|.+++.+++.++++.
T Consensus 286 s~dg~~l~~~s~~~-g~~~iy~~d~~~~~~~~l~~ 319 (417)
T TIGR02800 286 SPDGKSIAFTSDRG-GSPQIYMMDADGGEVRRLTF 319 (417)
T ss_pred CCCCCEEEEEECCC-CCceEEEEECCCCCEEEeec
Confidence 99999988865433 34589999998888777764
No 112
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.41 E-value=1.7e-11 Score=114.18 Aligned_cols=241 Identities=15% Similarity=0.089 Sum_probs=149.7
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCC-CCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQ-SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 300 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~-~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 300 (494)
+..++.-++..||-.+....+.+.+... .+.+..|+||++||-..++ ...+..........+||.+
T Consensus 91 ~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S-------------~~~YVr~lv~~a~~~G~r~ 157 (409)
T KOG1838|consen 91 VEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGS-------------HESYVRHLVHEAQRKGYRV 157 (409)
T ss_pred CcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCC-------------hhHHHHHHHHHHHhCCcEE
Confidence 3445555666799899998887765321 1124479999999953211 2222334455667799999
Q ss_pred EeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC--ceeEEEeCCCC
Q 011049 301 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH--LFCCGIARSGS 378 (494)
Q Consensus 301 ~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~--~~~a~v~~~~~ 378 (494)
+..|.||..|.--... .-+.....+|+..+++++.++.- ..++..+|.|+||.+...+++...+ .+.|+++++-.
T Consensus 158 VVfN~RG~~g~~LtTp-r~f~ag~t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~P 234 (409)
T KOG1838|consen 158 VVFNHRGLGGSKLTTP-RLFTAGWTEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNP 234 (409)
T ss_pred EEECCCCCCCCccCCC-ceeecCCHHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEecc
Confidence 9988877544322211 11222347899999999998753 2579999999999999999887643 34555555544
Q ss_pred CCCCC---------CCCCc--------c--------------------cccc--------------cccccHHHHHhcCc
Q 011049 379 YNKTL---------TPFGF--------Q--------------------TEFR--------------TLWEATNVYIEMSP 407 (494)
Q Consensus 379 ~~~~~---------~~~~~--------~--------------------~~~~--------------~~~~~~~~~~~~sp 407 (494)
+|... ...-+ . ...+ ..-...+.|.+.|+
T Consensus 235 wd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs 314 (409)
T KOG1838|consen 235 WDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASS 314 (409)
T ss_pred chhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcch
Confidence 44110 00000 0 0000 00112356788899
Q ss_pred cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcc---cHHHHHHH-HHHHHHHhc
Q 011049 408 ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARE---NVMHVIWE-TDRWLQKYC 483 (494)
Q Consensus 408 ~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~---~~~~~~~~-~~~fl~~~l 483 (494)
...+++|++|+|+|+..+|+++| .. +.-.-+ . ..+..+-+.+-...||--.... +..-++++ +.+||.+..
T Consensus 315 ~~~v~~I~VP~L~ina~DDPv~p--~~-~ip~~~-~-~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 315 SNYVDKIKVPLLCINAADDPVVP--EE-AIPIDD-I-KSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred hhhcccccccEEEEecCCCCCCC--cc-cCCHHH-H-hcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 99999999999999999999997 32 222222 2 2345677777777889632211 44456666 778876653
No 113
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.40 E-value=8.4e-12 Score=113.85 Aligned_cols=188 Identities=14% Similarity=0.086 Sum_probs=110.8
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVE 333 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~d~~~~v~ 333 (494)
.|.||++||.+.+. ..|. .....| .+|.|++++.+ |+|.+.... ...+...+|+.+.++
T Consensus 2 ~p~vvllHG~~~~~-----------~~w~----~~~~~l--~~~~vi~~D~~---G~G~S~~~~~~~~~~~~~~l~~~l~ 61 (242)
T PRK11126 2 LPWLVFLHGLLGSG-----------QDWQ----PVGEAL--PDYPRLYIDLP---GHGGSAAISVDGFADVSRLLSQTLQ 61 (242)
T ss_pred CCEEEEECCCCCCh-----------HHHH----HHHHHc--CCCCEEEecCC---CCCCCCCccccCHHHHHHHHHHHHH
Confidence 37899999975221 1222 223333 47999996654 555553321 123444555555544
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC-ceeEEEeCCCCCCCCCC-----------CCC--cccc--------
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGSYNKTLT-----------PFG--FQTE-------- 391 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-~~~a~v~~~~~~~~~~~-----------~~~--~~~~-------- 391 (494)
.+ + .+++.++|||+||.+++.++.++|+ ++++++..++....... .+. +...
T Consensus 62 ~~---~---~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (242)
T PRK11126 62 SY---N---ILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLAD 135 (242)
T ss_pred Hc---C---CCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHH
Confidence 32 2 3789999999999999999999865 49998887654321000 000 0000
Q ss_pred -------cccccccHHH----------------HHh------cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHH
Q 011049 392 -------FRTLWEATNV----------------YIE------MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDA 442 (494)
Q Consensus 392 -------~~~~~~~~~~----------------~~~------~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~ 442 (494)
.......... +.. .+....+.++++|+++++|++|..+ . .+.+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~----~---~~~~~ 208 (242)
T PRK11126 136 WYQQPVFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKF----Q---ALAQQ 208 (242)
T ss_pred HHhcchhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchH----H---HHHHH
Confidence 0000000000 000 0111245678999999999999853 1 12222
Q ss_pred HHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 443 LKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 443 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
...++.+++++||.+. .+..+.+.+.+.+||.+
T Consensus 209 -----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 209 -----LALPLHVIPNAGHNAH-RENPAAFAASLAQILRL 241 (242)
T ss_pred -----hcCeEEEeCCCCCchh-hhChHHHHHHHHHHHhh
Confidence 1468999999999876 47778888889999864
No 114
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.39 E-value=2.5e-11 Score=113.88 Aligned_cols=200 Identities=19% Similarity=0.144 Sum_probs=117.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCCCCCC-CCCchhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDK-LPNDRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~-~~~~~~~~~~~~d~~~~v 332 (494)
.|.||++||-+. +...|..... .|.. .|+.|++.|..| .|+... .....+ .+.+....+
T Consensus 58 ~~pvlllHGF~~-----------~~~~w~~~~~----~L~~~~~~~v~aiDl~G-~g~~s~~~~~~~y---~~~~~v~~i 118 (326)
T KOG1454|consen 58 KPPVLLLHGFGA-----------SSFSWRRVVP----LLSKAKGLRVLAIDLPG-HGYSSPLPRGPLY---TLRELVELI 118 (326)
T ss_pred CCcEEEeccccC-----------CcccHhhhcc----ccccccceEEEEEecCC-CCcCCCCCCCCce---ehhHHHHHH
Confidence 688999999542 2222432222 2222 369899855543 232111 122212 122333333
Q ss_pred H-HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEE---eCCCCCCCCCC------------------------
Q 011049 333 E-EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI---ARSGSYNKTLT------------------------ 384 (494)
Q Consensus 333 ~-~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v---~~~~~~~~~~~------------------------ 384 (494)
. .+++... .++.++|||+||++++.+|+.+|+.++..+ ...+.......
T Consensus 119 ~~~~~~~~~---~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 195 (326)
T KOG1454|consen 119 RRFVKEVFV---EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSL 195 (326)
T ss_pred HHHHHhhcC---cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCcccc
Confidence 3 3333332 459999999999999999999999999999 44443221000
Q ss_pred --CCC-cccc----------c-ccccccH--------------HHH-------H--hcCccccccCCC-CCEEEEecCCC
Q 011049 385 --PFG-FQTE----------F-RTLWEAT--------------NVY-------I--EMSPITHANKIK-KPILIIHGEVD 426 (494)
Q Consensus 385 --~~~-~~~~----------~-~~~~~~~--------------~~~-------~--~~sp~~~~~~~~-~P~li~~G~~D 426 (494)
+.. +... . ...++.. +.+ . +......+.++. +|+|+++|+.|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D 275 (326)
T KOG1454|consen 196 TEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKD 275 (326)
T ss_pred ccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcC
Confidence 000 0000 0 0000000 000 0 012333456666 99999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 427 DKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 427 ~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
+.+| .+.+..+.+.+ ..+++.+++++||.... +.++.+...+..|+.++.
T Consensus 276 ~~~p--~~~~~~~~~~~----pn~~~~~I~~~gH~~h~-e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 276 QIVP--LELAEELKKKL----PNAELVEIPGAGHLPHL-ERPEEVAALLRSFIARLR 325 (326)
T ss_pred CccC--HHHHHHHHhhC----CCceEEEeCCCCccccc-CCHHHHHHHHHHHHHHhc
Confidence 9998 66555554444 55899999999999885 788899999999998763
No 115
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.38 E-value=3.7e-11 Score=111.13 Aligned_cols=193 Identities=13% Similarity=0.110 Sum_probs=111.1
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC---chhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~ 331 (494)
.|.||++||.+.. ...|. .....|.++||.|++++.+ |+|.+... ....++..+++.+.
T Consensus 18 ~p~vvliHG~~~~-----------~~~w~----~~~~~L~~~g~~vi~~dl~---g~G~s~~~~~~~~~~~~~~~~l~~~ 79 (273)
T PLN02211 18 PPHFVLIHGISGG-----------SWCWY----KIRCLMENSGYKVTCIDLK---SAGIDQSDADSVTTFDEYNKPLIDF 79 (273)
T ss_pred CCeEEEECCCCCC-----------cCcHH----HHHHHHHhCCCEEEEeccc---CCCCCCCCcccCCCHHHHHHHHHHH
Confidence 5889999996421 11121 2344667789999995554 55543221 12234444444444
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC--C------C--------------CCcc
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--T------P--------------FGFQ 389 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~--~------~--------------~~~~ 389 (494)
++ +.. ..+++.++||||||.++..++..+|++++++|.+++...... . . +...
T Consensus 80 i~---~l~--~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (273)
T PLN02211 80 LS---SLP--ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLG 154 (273)
T ss_pred HH---hcC--CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccC
Confidence 43 322 136899999999999999999999999999998866321000 0 0 0000
Q ss_pred cc-c-cccc---c---------cH----HHH---Hh---cCccc------cccCC-CCCEEEEecCCCCCCCCCHHHHHH
Q 011049 390 TE-F-RTLW---E---------AT----NVY---IE---MSPIT------HANKI-KKPILIIHGEVDDKVGLFPMQAER 438 (494)
Q Consensus 390 ~~-~-~~~~---~---------~~----~~~---~~---~sp~~------~~~~~-~~P~li~~G~~D~~v~~~~~~~~~ 438 (494)
.. . .... + .+ ..+ .. ...+. ...++ ++|+++|.|++|..+| +...+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip--~~~~~~ 232 (273)
T PLN02211 155 PDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVK--PEQQEA 232 (273)
T ss_pred CCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCC--HHHHHH
Confidence 00 0 0000 0 00 000 00 01111 12244 6899999999999998 887777
Q ss_pred HHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHH
Q 011049 439 FFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRW 478 (494)
Q Consensus 439 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f 478 (494)
+.+.+.. .+++.++ +||.... +..+.+...+.+.
T Consensus 233 m~~~~~~----~~~~~l~-~gH~p~l-s~P~~~~~~i~~~ 266 (273)
T PLN02211 233 MIKRWPP----SQVYELE-SDHSPFF-STPFLLFGLLIKA 266 (273)
T ss_pred HHHhCCc----cEEEEEC-CCCCccc-cCHHHHHHHHHHH
Confidence 7766542 3677776 7998653 5555555555544
No 116
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.34 E-value=8.9e-11 Score=103.79 Aligned_cols=206 Identities=18% Similarity=0.166 Sum_probs=126.5
Q ss_pred EEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC
Q 011049 238 TATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN 317 (494)
Q Consensus 238 ~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~ 317 (494)
+..++.|.. .+.||+||++||-. ....+ +......+|+.||+|+.++.+...+...
T Consensus 5 ~l~v~~P~~-----~g~yPVv~f~~G~~------------~~~s~---Ys~ll~hvAShGyIVV~~d~~~~~~~~~---- 60 (259)
T PF12740_consen 5 PLLVYYPSS-----AGTYPVVLFLHGFL------------LINSW---YSQLLEHVASHGYIVVAPDLYSIGGPDD---- 60 (259)
T ss_pred CeEEEecCC-----CCCcCEEEEeCCcC------------CCHHH---HHHHHHHHHhCceEEEEecccccCCCCc----
Confidence 456788876 45599999999842 00111 2234568899999999977544333211
Q ss_pred chhHHHHHHHHHHHHHHHHHc--C------CCCCCcEEEEecChHHHHHHHHHHhC-----CCceeEEEeCCCCCCCCCC
Q 011049 318 DRFVEQLVSSAEAAVEEVVRR--G------VADPSRIAVGGHSYGAFMTAHLLAHA-----PHLFCCGIARSGSYNKTLT 384 (494)
Q Consensus 318 ~~~~~~~~~d~~~~v~~l~~~--~------~~d~~ri~i~G~S~GG~~a~~~~~~~-----p~~~~a~v~~~~~~~~~~~ 384 (494)
....+++.+.++|+.+. . .+|-+||+|+|||.||-++..++..+ +.+|++++.+.|+-.....
T Consensus 61 ----~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~ 136 (259)
T PF12740_consen 61 ----TDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKG 136 (259)
T ss_pred ----chhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccc
Confidence 23466677778887662 1 24778999999999999999999887 4589999999997521110
Q ss_pred CCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCC------CCCHH--HHHHHHHHHHhCCCcEEEEEcC
Q 011049 385 PFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKV------GLFPM--QAERFFDALKGHGALSRLVLLP 456 (494)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v------~~~~~--~~~~~~~~l~~~g~~~~~~~~~ 456 (494)
. .. .+..+. ..| ..-+...|+|++-.+..... +|-+. +-.+|+++++ .+.-.++.+
T Consensus 137 ~---~~-------~P~v~~-~~p--~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~---~p~~~~v~~ 200 (259)
T PF12740_consen 137 S---QT-------EPPVLT-YTP--QSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECK---PPSWHFVAK 200 (259)
T ss_pred c---CC-------CCcccc-Ccc--cccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcC---CCEEEEEeC
Confidence 0 00 000000 001 11124589999887766421 12122 3456777664 556777889
Q ss_pred CCCCccCCccc------------------------HHHHHHHHHHHHHHhcCCCC
Q 011049 457 FEHHVYAAREN------------------------VMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 457 ~~~H~~~~~~~------------------------~~~~~~~~~~fl~~~l~~~~ 487 (494)
+.||.-+.... +......+.+|++.+|.+..
T Consensus 201 ~~GH~d~LDd~~~~~~~~~~~~~~Ck~g~~~~~~~r~f~~g~~vAfl~~~l~g~~ 255 (259)
T PF12740_consen 201 DYGHMDFLDDDTPGYVGLCLFRCLCKNGPDDRDPMRRFVGGIMVAFLNAQLQGDP 255 (259)
T ss_pred CCCchHhhcCCCcchhHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhcCch
Confidence 99995211111 11223467889999988753
No 117
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=99.33 E-value=3e-11 Score=107.34 Aligned_cols=222 Identities=18% Similarity=0.156 Sum_probs=127.3
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCC----eE
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR----FA 299 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G----~~ 299 (494)
.+.+.+.+.-..+....+|+|+++.+..+ +|++++.||--|.. +.... .....|+..| -+
T Consensus 69 ~~~~~~~~~l~~~~~~vv~lppgy~~~~k--~pvl~~~DG~~~~~-------------~g~i~-~~~dsli~~g~i~pai 132 (299)
T COG2382 69 VEEILYSSELLSERRRVVYLPPGYNPLEK--YPVLYLQDGQDWFR-------------SGRIP-RILDSLIAAGEIPPAI 132 (299)
T ss_pred hhhhhhhhhhccceeEEEEeCCCCCcccc--ccEEEEeccHHHHh-------------cCChH-HHHHHHHHcCCCCCce
Confidence 34445544434577888999999877654 99999999843210 11111 1222445544 44
Q ss_pred EEeCCCCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHHHcCC--CCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCC
Q 011049 300 VLAGPSIPIIGEGDKL-PNDRFVEQLVSSAEAAVEEVVRRGV--ADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS 376 (494)
Q Consensus 300 v~~~~~~~~~g~g~~~-~~~~~~~~~~~d~~~~v~~l~~~~~--~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~ 376 (494)
++.+++.+..-+..+. .+..+......++ +-++.+..- -++++-+++|.|+||.++++++.++|++|-++++.+
T Consensus 133 ~vgid~~d~~~R~~~~~~n~~~~~~L~~eL---lP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~S 209 (299)
T COG2382 133 LVGIDYIDVKKRREELHCNEAYWRFLAQEL---LPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQS 209 (299)
T ss_pred EEecCCCCHHHHHHHhcccHHHHHHHHHHh---hhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccC
Confidence 5544443321111111 2223333333333 344444322 356788999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 011049 377 GSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP 456 (494)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~ 456 (494)
|.+++...... ..++.. ...+-...+..... +.+..|.++.-+ ....+++++.|++++.++.+..|+
T Consensus 210 ps~~~~~~~~~------~~~~~~---~~l~~~~a~~~~~~-~~l~~g~~~~~~---~~pNr~L~~~L~~~g~~~~yre~~ 276 (299)
T COG2382 210 GSFWWTPLDTQ------PQGEVA---ESLKILHAIGTDER-IVLTTGGEEGDF---LRPNRALAAQLEKKGIPYYYREYP 276 (299)
T ss_pred CccccCccccc------cccchh---hhhhhhhccCccce-EEeecCCccccc---cchhHHHHHHHHhcCCcceeeecC
Confidence 97764321110 001111 11111111222223 333333333322 456789999999999999999999
Q ss_pred CCCCccCCcccHHHHHHHHHHHHHHhcC
Q 011049 457 FEHHVYAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 457 ~~~H~~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
| ||.+. .+...+.++|...++
T Consensus 277 G-gHdw~------~Wr~~l~~~L~~l~~ 297 (299)
T COG2382 277 G-GHDWA------WWRPALAEGLQLLLP 297 (299)
T ss_pred C-CCchh------HhHHHHHHHHHHhhc
Confidence 9 99764 333345566655443
No 118
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.33 E-value=1.4e-10 Score=114.92 Aligned_cols=150 Identities=11% Similarity=0.056 Sum_probs=109.5
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
..||++++ ++++.+.++........|+|||||+.|+|....++ ..+||+++++++ ..++++.....+ ..
T Consensus 214 ~~i~v~d~---~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~-~~~i~~~d~~~~--~~~~l~~~~~~~-----~~ 282 (417)
T TIGR02800 214 PEIYVQDL---ATGQREKVASFPGMNGAPAFSPDGSKLAVSLSKDG-NPDIYVMDLDGK--QLTRLTNGPGID-----TE 282 (417)
T ss_pred cEEEEEEC---CCCCEEEeecCCCCccceEECCCCCEEEEEECCCC-CccEEEEECCCC--CEEECCCCCCCC-----CC
Confidence 47999999 77877777776666667999999999999876555 678999999987 667777654332 34
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 177 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s 177 (494)
|. |+|||++|+|.+.. ...++||++|+++++.+++...... ...+.|+
T Consensus 283 ~~--~s~dg~~l~~~s~~------------------~g~~~iy~~d~~~~~~~~l~~~~~~------------~~~~~~s 330 (417)
T TIGR02800 283 PS--WSPDGKSIAFTSDR------------------GGSPQIYMMDADGGEVRRLTFRGGY------------NASPSWS 330 (417)
T ss_pred EE--ECCCCCEEEEEECC------------------CCCceEEEEECCCCCEEEeecCCCC------------ccCeEEC
Confidence 44 99999999998631 1234699999999887776543221 1234789
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
|||+.++++.... ....++++++.++..+.++.
T Consensus 331 pdg~~i~~~~~~~-~~~~i~~~d~~~~~~~~l~~ 363 (417)
T TIGR02800 331 PDGDLIAFVHREG-GGFNIAVMDLDGGGERVLTD 363 (417)
T ss_pred CCCCEEEEEEccC-CceEEEEEeCCCCCeEEccC
Confidence 9999888876532 23479999988876666553
No 119
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.32 E-value=1.6e-10 Score=104.30 Aligned_cols=177 Identities=15% Similarity=0.080 Sum_probs=107.7
Q ss_pred HHHhCCeEEEeCCCCCCCCCCCCCCCchh--HHHHHHHHHHHH-HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc
Q 011049 292 IFLARRFAVLAGPSIPIIGEGDKLPNDRF--VEQLVSSAEAAV-EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL 368 (494)
Q Consensus 292 ~l~~~G~~v~~~~~~~~~g~g~~~~~~~~--~~~~~~d~~~~v-~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~ 368 (494)
.|+. ...|.+ .+..|+|.+....-- .........+.+ +|-++.+. +++.|+|||+|||++..+|.++|++
T Consensus 112 ~La~-~~~vya---iDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L---~KmilvGHSfGGYLaa~YAlKyPer 184 (365)
T KOG4409|consen 112 DLAK-IRNVYA---IDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGL---EKMILVGHSFGGYLAAKYALKYPER 184 (365)
T ss_pred hhhh-cCceEE---ecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCC---cceeEeeccchHHHHHHHHHhChHh
Confidence 3344 778887 455567766432110 011111233334 45566665 6899999999999999999999999
Q ss_pred eeEEEeCCCCCCCCCC---C------CCcc--------ccc-------ccccc------------------cHHHH----
Q 011049 369 FCCGIARSGSYNKTLT---P------FGFQ--------TEF-------RTLWE------------------ATNVY---- 402 (494)
Q Consensus 369 ~~a~v~~~~~~~~~~~---~------~~~~--------~~~-------~~~~~------------------~~~~~---- 402 (494)
++-+|+.+|+.-..-. . ..+. ... ..+|. ..+.+
T Consensus 185 V~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~Y 264 (365)
T KOG4409|consen 185 VEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEY 264 (365)
T ss_pred hceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHH
Confidence 9999999886431100 0 0000 000 00000 00000
Q ss_pred --H---------------------hcCc-cccccCCC--CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 011049 403 --I---------------------EMSP-ITHANKIK--KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLP 456 (494)
Q Consensus 403 --~---------------------~~sp-~~~~~~~~--~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~ 456 (494)
. ...| +..+..++ +|+++|+|++|..= .....++...| ....++.+++|
T Consensus 265 iY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD---~~~g~~~~~~~--~~~~~~~~~v~ 339 (365)
T KOG4409|consen 265 IYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMD---KNAGLEVTKSL--MKEYVEIIIVP 339 (365)
T ss_pred HHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCccccc---chhHHHHHHHh--hcccceEEEec
Confidence 0 0111 12233344 99999999999853 56667777766 33558999999
Q ss_pred CCCCccCCcccHHHHHHHHHHHHHH
Q 011049 457 FEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 457 ~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
++||... .++.+.+.+.++.++++
T Consensus 340 ~aGHhvy-lDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 340 GAGHHVY-LDNPEFFNQIVLEECDK 363 (365)
T ss_pred CCCceee-cCCHHHHHHHHHHHHhc
Confidence 9999876 37777888888888765
No 120
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.32 E-value=1.6e-10 Score=106.88 Aligned_cols=191 Identities=24% Similarity=0.229 Sum_probs=120.9
Q ss_pred hHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH-cCCCCCCcEEEEecChHHHHHHHHHHh---
Q 011049 289 SSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVR-RGVADPSRIAVGGHSYGAFMTAHLLAH--- 364 (494)
Q Consensus 289 ~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~-~~~~d~~ri~i~G~S~GG~~a~~~~~~--- 364 (494)
....|+++||+|+++|+.| .|..+.........+-|..++.+.+.. .+.-...+++++|+|.||+.+++++..
T Consensus 18 ~l~~~L~~GyaVv~pDY~G---lg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~ 94 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEG---LGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPS 94 (290)
T ss_pred HHHHHHHCCCEEEecCCCC---CCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHH
Confidence 4457889999999988754 444443333333445555555555544 233234799999999999999888754
Q ss_pred -CCCc---eeEEEeCCCCCCCCC-------CCC----------------Ccc--------ccc-----------------
Q 011049 365 -APHL---FCCGIARSGSYNKTL-------TPF----------------GFQ--------TEF----------------- 392 (494)
Q Consensus 365 -~p~~---~~a~v~~~~~~~~~~-------~~~----------------~~~--------~~~----------------- 392 (494)
.|++ +.++++.+++.|... ... .+. ...
T Consensus 95 YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~~~~ 174 (290)
T PF03583_consen 95 YAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLADIVA 174 (290)
T ss_pred hCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHHHHH
Confidence 3554 788888887765110 000 000 000
Q ss_pred ----ccc--------------cccH---HHHHhcCc-cccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC-Cc
Q 011049 393 ----RTL--------------WEAT---NVYIEMSP-ITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHG-AL 449 (494)
Q Consensus 393 ----~~~--------------~~~~---~~~~~~sp-~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g-~~ 449 (494)
... ...+ ..+.+.+. ...-..-+.|++|.||..|..|| +..+.++++.+.++| .+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP--~~~~~~l~~~~c~~G~a~ 252 (290)
T PF03583_consen 175 EYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVP--PADTDALVAKWCAAGGAD 252 (290)
T ss_pred HhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCC--hHHHHHHHHHHHHcCCCC
Confidence 000 0000 01111111 00011225899999999999998 999999999999999 79
Q ss_pred EEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCCCCC
Q 011049 450 SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTS 488 (494)
Q Consensus 450 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 488 (494)
++++.++..+|.... .......++||...+.+.+.
T Consensus 253 V~~~~~~~~~H~~~~----~~~~~~a~~Wl~~rf~G~~~ 287 (290)
T PF03583_consen 253 VEYVRYPGGGHLGAA----FASAPDALAWLDDRFAGKPA 287 (290)
T ss_pred EEEEecCCCChhhhh----hcCcHHHHHHHHHHHCCCCC
Confidence 999999999996432 12345678999999988754
No 121
>COG0627 Predicted esterase [General function prediction only]
Probab=99.31 E-value=6.4e-11 Score=109.24 Aligned_cols=147 Identities=20% Similarity=0.203 Sum_probs=104.8
Q ss_pred HHHcCCCCCC--cEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC---------CCCCCcccccccccccH--HH
Q 011049 335 VVRRGVADPS--RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT---------LTPFGFQTEFRTLWEAT--NV 401 (494)
Q Consensus 335 l~~~~~~d~~--ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~---------~~~~~~~~~~~~~~~~~--~~ 401 (494)
+.+...++.+ +.+|+||||||+-|+.+|+++|++|+.+.+++|+.+.. ...++-... ...|... ..
T Consensus 141 ~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~-~~~~G~~~~~~ 219 (316)
T COG0627 141 WEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAF-NAMLGPDSDPA 219 (316)
T ss_pred HHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccH-HHhcCCCcccc
Confidence 3344445553 89999999999999999999999999999999998855 222221111 1122211 24
Q ss_pred HHhcCccccccC--------------CCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCccc
Q 011049 402 YIEMSPITHANK--------------IKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN 467 (494)
Q Consensus 402 ~~~~sp~~~~~~--------------~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 467 (494)
+.+.+|...+++ ...++++-+|..|.........++.+.+++++.|.+..+..+++..|.+. .
T Consensus 220 w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~---~ 296 (316)
T COG0627 220 WQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWY---F 296 (316)
T ss_pred ccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHH---H
Confidence 566667666653 44778888999998641002337899999999999999999988899864 3
Q ss_pred HHHHHHHHHHHHHHhcCC
Q 011049 468 VMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 468 ~~~~~~~~~~fl~~~l~~ 485 (494)
+...+..++.|+...|..
T Consensus 297 w~~~l~~~~~~~a~~l~~ 314 (316)
T COG0627 297 WASQLADHLPWLAGALGL 314 (316)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 456778889999888764
No 122
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.30 E-value=3.1e-11 Score=99.61 Aligned_cols=202 Identities=14% Similarity=0.117 Sum_probs=133.0
Q ss_pred cccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 222 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 222 ~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
.+.|.+.|- ..| .-...++.|.+ . .|+.|++|||+|..++-.. .-........+||+|+
T Consensus 43 ~r~e~l~Yg-~~g-~q~VDIwg~~~-----~--~klfIfIHGGYW~~g~rk~------------clsiv~~a~~~gY~va 101 (270)
T KOG4627|consen 43 IRVEHLRYG-EGG-RQLVDIWGSTN-----Q--AKLFIFIHGGYWQEGDRKM------------CLSIVGPAVRRGYRVA 101 (270)
T ss_pred cchhccccC-CCC-ceEEEEecCCC-----C--ccEEEEEecchhhcCchhc------------ccchhhhhhhcCeEEE
Confidence 356666664 233 55677777754 1 6899999999986543211 1112334578999998
Q ss_pred eCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC-CCceeEEEeCCCCCC
Q 011049 302 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYN 380 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~~~ 380 (494)
.+. |+.... ....++.+.++...++|+.+.. -..+.+.+.|||.|+++++.+.++. ..++.+++..+|+++
T Consensus 102 svg------Y~l~~q-~htL~qt~~~~~~gv~filk~~-~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~ 173 (270)
T KOG4627|consen 102 SVG------YNLCPQ-VHTLEQTMTQFTHGVNFILKYT-ENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD 173 (270)
T ss_pred Eec------cCcCcc-cccHHHHHHHHHHHHHHHHHhc-ccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh
Confidence 733 333312 2245777889999999998864 2456799999999999999988754 358899999999876
Q ss_pred CCC-CCCCcccccccccccHHHHHhcCcc-ccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 011049 381 KTL-TPFGFQTEFRTLWEATNVYIEMSPI-THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 458 (494)
Q Consensus 381 ~~~-~~~~~~~~~~~~~~~~~~~~~~sp~-~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 458 (494)
..- .........+. +.+.-...|+. .....++.|+|++.+++|.--- ++|++.+...+++ ..+..|++.
T Consensus 174 l~EL~~te~g~dlgL---t~~~ae~~Scdl~~~~~v~~~ilVv~~~~espkl--ieQnrdf~~q~~~----a~~~~f~n~ 244 (270)
T KOG4627|consen 174 LRELSNTESGNDLGL---TERNAESVSCDLWEYTDVTVWILVVAAEHESPKL--IEQNRDFADQLRK----ASFTLFKNY 244 (270)
T ss_pred HHHHhCCccccccCc---ccchhhhcCccHHHhcCceeeeeEeeecccCcHH--HHhhhhHHHHhhh----cceeecCCc
Confidence 321 11001010000 01111222332 2345678999999999997643 8899999999987 477889999
Q ss_pred CCc
Q 011049 459 HHV 461 (494)
Q Consensus 459 ~H~ 461 (494)
+|.
T Consensus 245 ~hy 247 (270)
T KOG4627|consen 245 DHY 247 (270)
T ss_pred chh
Confidence 996
No 123
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.30 E-value=5.3e-11 Score=99.15 Aligned_cols=210 Identities=14% Similarity=0.123 Sum_probs=131.0
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 302 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 302 (494)
..+.+.++.+.+..+-+.+..-. ..-++|++||- +...+. -.....+..++..||-++.
T Consensus 9 ~~~~ivi~n~~ne~lvg~lh~tg--------s~e~vvlcHGf-----------rS~Kn~--~~~~~vA~~~e~~gis~fR 67 (269)
T KOG4667|consen 9 IAQKIVIPNSRNEKLVGLLHETG--------STEIVVLCHGF-----------RSHKNA--IIMKNVAKALEKEGISAFR 67 (269)
T ss_pred eeeEEEeccCCCchhhcceeccC--------CceEEEEeecc-----------ccccch--HHHHHHHHHHHhcCceEEE
Confidence 35567777777777766544322 24689999983 111110 1112334567789999998
Q ss_pred CCCCCCCCCCCCCCCchh--HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCC
Q 011049 303 GPSIPIIGEGDKLPNDRF--VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 380 (494)
Q Consensus 303 ~~~~~~~g~g~~~~~~~~--~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~ 380 (494)
++..|.|++...-.+ ....++|+..+++++..... .--+|+|||-||.+++..+.++++ ++-+|..+|-++
T Consensus 68 ---fDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr---~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRyd 140 (269)
T KOG4667|consen 68 ---FDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNR---VVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYD 140 (269)
T ss_pred ---EEecCCCCcCCccccCcccchHHHHHHHHHHhccCce---EEEEEEeecCccHHHHHHHHhhcC-chheEEcccccc
Confidence 444566665433222 23456999999999855321 223799999999999999999966 677888888766
Q ss_pred CCCCC------C--------Ccc------cccccccccHHHHHhcCc--cccccCC--CCCEEEEecCCCCCCCCCHHHH
Q 011049 381 KTLTP------F--------GFQ------TEFRTLWEATNVYIEMSP--ITHANKI--KKPILIIHGEVDDKVGLFPMQA 436 (494)
Q Consensus 381 ~~~~~------~--------~~~------~~~~~~~~~~~~~~~~sp--~~~~~~~--~~P~li~~G~~D~~v~~~~~~~ 436 (494)
....- . +|. ......|.....+...+. ...-.+| +||+|-+||..|..|| .+.+
T Consensus 141 l~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVP--ve~A 218 (269)
T KOG4667|consen 141 LKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVP--VEDA 218 (269)
T ss_pred hhcchhhhhcccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceee--chhH
Confidence 32100 0 000 001111211111111111 1111223 5999999999999998 9999
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCccCCcc
Q 011049 437 ERFFDALKGHGALSRLVLLPFEHHVYAARE 466 (494)
Q Consensus 437 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 466 (494)
.++++.+.. .++.+++|+.|.+...+
T Consensus 219 kefAk~i~n----H~L~iIEgADHnyt~~q 244 (269)
T KOG4667|consen 219 KEFAKIIPN----HKLEIIEGADHNYTGHQ 244 (269)
T ss_pred HHHHHhccC----CceEEecCCCcCccchh
Confidence 999998876 47899999999997544
No 124
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.28 E-value=8.1e-11 Score=112.64 Aligned_cols=188 Identities=18% Similarity=0.174 Sum_probs=101.4
Q ss_pred CCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCC-----C-----C-------
Q 011049 253 GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGD-----K-----L------- 315 (494)
Q Consensus 253 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~-----~-----~------- 315 (494)
+++|+||+-||-+ + ....+...+..||++||+|++++.++..+... . .
T Consensus 98 ~~~PvvIFSHGlg-----------g----~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~ 162 (379)
T PF03403_consen 98 GKFPVVIFSHGLG-----------G----SRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYL 162 (379)
T ss_dssp S-EEEEEEE--TT-----------------TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT-------
T ss_pred CCCCEEEEeCCCC-----------c----chhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCcccccccccccc
Confidence 3499999999954 2 22223456779999999999987775432100 0 0
Q ss_pred -----------CCchh------HHHHHHHHHHHHHHHHH--c------------------CCCCCCcEEEEecChHHHHH
Q 011049 316 -----------PNDRF------VEQLVSSAEAAVEEVVR--R------------------GVADPSRIAVGGHSYGAFMT 358 (494)
Q Consensus 316 -----------~~~~~------~~~~~~d~~~~v~~l~~--~------------------~~~d~~ri~i~G~S~GG~~a 358 (494)
....+ .+.-+.|+..+++.|.+ . +.+|.++|+++|||+||..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa 242 (379)
T PF03403_consen 163 EEEWIPLRDFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATA 242 (379)
T ss_dssp --EEEE-----GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHH
T ss_pred ccceeccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHH
Confidence 00000 11225677777777754 1 33567899999999999999
Q ss_pred HHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHH
Q 011049 359 AHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAER 438 (494)
Q Consensus 359 ~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~ 438 (494)
+.++.+. .+|+|+|++.|..- +. .. . ...+++.|+|+|+.+. ... ..+...
T Consensus 243 ~~~l~~d-~r~~~~I~LD~W~~----Pl--~~----------------~--~~~~i~~P~L~InSe~-f~~---~~~~~~ 293 (379)
T PF03403_consen 243 LQALRQD-TRFKAGILLDPWMF----PL--GD----------------E--IYSKIPQPLLFINSES-FQW---WENIFR 293 (379)
T ss_dssp HHHHHH--TT--EEEEES---T----TS---G----------------G--GGGG--S-EEEEEETT-T-----HHHHHH
T ss_pred HHHHhhc-cCcceEEEeCCccc----CC--Cc----------------c--cccCCCCCEEEEECcc-cCC---hhhHHH
Confidence 9999887 88999999888531 10 00 0 1145678999998885 432 333333
Q ss_pred HHHHHHhCCCcEEEEEcCCCCCccC------Cc------------ccH----HHHHHHHHHHHHHhcCC
Q 011049 439 FFDALKGHGALSRLVLLPFEHHVYA------AR------------ENV----MHVIWETDRWLQKYCLS 485 (494)
Q Consensus 439 ~~~~l~~~g~~~~~~~~~~~~H~~~------~~------------~~~----~~~~~~~~~fl~~~l~~ 485 (494)
+.+ +........++.+.|..|.-. .+ .+. ....+.+++||++||+-
T Consensus 294 ~~~-~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~~ 361 (379)
T PF03403_consen 294 MKK-VISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLGL 361 (379)
T ss_dssp HHT-T--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT-
T ss_pred HHH-HhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcCC
Confidence 333 334456678899999999521 00 111 23456789999999873
No 125
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.27 E-value=9.2e-11 Score=112.93 Aligned_cols=69 Identities=14% Similarity=0.177 Sum_probs=57.9
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC-CCCccCCcccHHHHHHHHHHHHHH
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPF-EHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
.+.++++|+|+++|+.|..+| +.+++++.+.+...+.+++++++++ .||.... +....+.+.+.+||.+
T Consensus 318 ~L~~I~~PtLvI~G~~D~l~p--~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l-e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 318 ALSNIEANVLMIPCKQDLLQP--PRYNYKMVDILQKQGKYAEVYEIESINGHMAGV-FDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHhcCCCCEEEEEeCCCCCCC--HHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh-cCHHHHHHHHHHHHcc
Confidence 455789999999999999998 9999999999987666789999985 8998663 6667788888888865
No 126
>PRK05855 short chain dehydrogenase; Validated
Probab=99.26 E-value=8.7e-11 Score=121.81 Aligned_cols=214 Identities=15% Similarity=0.128 Sum_probs=119.8
Q ss_pred EcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCC
Q 011049 230 QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII 309 (494)
Q Consensus 230 ~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~ 309 (494)
...||.++.+..+-++ + .|.||++||.+.+ ...|. .....| ..||.|+++|.+
T Consensus 8 ~~~~g~~l~~~~~g~~------~--~~~ivllHG~~~~-----------~~~w~----~~~~~L-~~~~~Vi~~D~~--- 60 (582)
T PRK05855 8 VSSDGVRLAVYEWGDP------D--RPTVVLVHGYPDN-----------HEVWD----GVAPLL-ADRFRVVAYDVR--- 60 (582)
T ss_pred EeeCCEEEEEEEcCCC------C--CCeEEEEcCCCch-----------HHHHH----HHHHHh-hcceEEEEecCC---
Confidence 3468888887765322 1 5789999996521 11222 223344 789999996654
Q ss_pred CCCCCCCC----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCCCCCC-
Q 011049 310 GEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYNKT- 382 (494)
Q Consensus 310 g~g~~~~~----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~~~~- 382 (494)
|+|.+... .......++|+..+++.+ +. ..++.++|||+||.+++.++... ++++...+..++.....
T Consensus 61 G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l---~~--~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~ 135 (582)
T PRK05855 61 GAGRSSAPKRTAAYTLARLADDFAAVIDAV---SP--DRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHV 135 (582)
T ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHh---CC--CCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHH
Confidence 55555322 112456677877777765 21 23499999999999988776652 23333333332211000
Q ss_pred -------C---CCCCc----c---c--------------c-----c-ccccc------------------------cHHH
Q 011049 383 -------L---TPFGF----Q---T--------------E-----F-RTLWE------------------------ATNV 401 (494)
Q Consensus 383 -------~---~~~~~----~---~--------------~-----~-~~~~~------------------------~~~~ 401 (494)
. ....+ . . . . ...+. ....
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (582)
T PRK05855 136 GFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKL 215 (582)
T ss_pred HHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHH
Confidence 0 00000 0 0 0 0 00000 0000
Q ss_pred HHh----cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHH
Q 011049 402 YIE----MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDR 477 (494)
Q Consensus 402 ~~~----~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 477 (494)
+.. ......+.++++|+|+++|++|..+| ......+.+.+. ..++++++ .||... .+....+...+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~--~~~~~~~~~~~~----~~~~~~~~-~gH~~~-~e~p~~~~~~i~~ 287 (582)
T PRK05855 216 YRANMIRSLSRPRERYTDVPVQLIVPTGDPYVR--PALYDDLSRWVP----RLWRREIK-AGHWLP-MSHPQVLAAAVAE 287 (582)
T ss_pred HHhhhhhhhccCccCCccCceEEEEeCCCcccC--HHHhccccccCC----cceEEEcc-CCCcch-hhChhHHHHHHHH
Confidence 000 00011134478999999999999997 776665554332 35667776 589876 4667778888999
Q ss_pred HHHHhc
Q 011049 478 WLQKYC 483 (494)
Q Consensus 478 fl~~~l 483 (494)
|+.+.-
T Consensus 288 fl~~~~ 293 (582)
T PRK05855 288 FVDAVE 293 (582)
T ss_pred HHHhcc
Confidence 998753
No 127
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.22 E-value=6.3e-10 Score=125.63 Aligned_cols=202 Identities=16% Similarity=0.182 Sum_probs=121.8
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC----------chhHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN----------DRFVEQL 324 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~----------~~~~~~~ 324 (494)
.|.||++||.+.+ ...|. .....| ..+|.|+.++.+ |+|.+... ....+..
T Consensus 1371 ~~~vVllHG~~~s-----------~~~w~----~~~~~L-~~~~rVi~~Dl~---G~G~S~~~~~~~~~~~~~~~si~~~ 1431 (1655)
T PLN02980 1371 GSVVLFLHGFLGT-----------GEDWI----PIMKAI-SGSARCISIDLP---GHGGSKIQNHAKETQTEPTLSVELV 1431 (1655)
T ss_pred CCeEEEECCCCCC-----------HHHHH----HHHHHH-hCCCEEEEEcCC---CCCCCCCccccccccccccCCHHHH
Confidence 5789999996521 12222 122233 457999996654 55554321 1113344
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC------------------CC
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT------------------PF 386 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~------------------~~ 386 (494)
.+++.+.++.+ ..+++.++||||||.+++.++.++|++++++|++++....... ..
T Consensus 1432 a~~l~~ll~~l------~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~ 1505 (1655)
T PLN02980 1432 ADLLYKLIEHI------TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDH 1505 (1655)
T ss_pred HHHHHHHHHHh------CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhh
Confidence 44444444432 3468999999999999999999999999999987653211000 00
Q ss_pred Ccccc-----cccccc-------------------cHH----HHHhc------CccccccCCCCCEEEEecCCCCCCCCC
Q 011049 387 GFQTE-----FRTLWE-------------------ATN----VYIEM------SPITHANKIKKPILIIHGEVDDKVGLF 432 (494)
Q Consensus 387 ~~~~~-----~~~~~~-------------------~~~----~~~~~------sp~~~~~~~~~P~li~~G~~D~~v~~~ 432 (494)
..... ....|. +.. .+... +....+.++++|+|+++|++|..+
T Consensus 1506 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~--- 1582 (1655)
T PLN02980 1506 GLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKF--- 1582 (1655)
T ss_pred hHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCcc---
Confidence 00000 000000 000 00000 111236678899999999999875
Q ss_pred HHHHHHHHHHHHhCC--------CcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 433 PMQAERFFDALKGHG--------ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 433 ~~~~~~~~~~l~~~g--------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+..+.++.+.+.+.. ..+++++++++||... .++.+.+.+.+.+||.+.-..
T Consensus 1583 ~~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~-lE~Pe~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1583 KQIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVH-LENPLPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred HHHHHHHHHHccccccccccccccceEEEEECCCCCchH-HHCHHHHHHHHHHHHHhcccc
Confidence 355667776665421 1268999999999876 477778899999999876543
No 128
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.22 E-value=1.3e-09 Score=91.53 Aligned_cols=129 Identities=21% Similarity=0.273 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHh
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIE 404 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (494)
.+-+...++.-.+.+ ++++||++.|.|+||.++++++..+|....+.+..+++....... + .-|
T Consensus 75 a~~i~~Li~~e~~~G-i~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~--~-----~~~-------- 138 (206)
T KOG2112|consen 75 ADNIANLIDNEPANG-IPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG--L-----PGW-------- 138 (206)
T ss_pred HHHHHHHHHHHHHcC-CCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh--c-----cCC--------
Confidence 334444555555555 788999999999999999999999977666677766654311100 0 000
Q ss_pred cCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 405 MSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 405 ~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
-+ ..+ .+|++..||+.|+.|| ..-.++..+.|+..+.++++..|++.+|.... +.+..+..|+.+
T Consensus 139 -~~---~~~-~~~i~~~Hg~~d~~vp--~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~-----~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 139 -LP---GVN-YTPILLCHGTADPLVP--FRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSP-----QELDDLKSWIKT 203 (206)
T ss_pred -cc---ccC-cchhheecccCCceee--hHHHHHHHHHHHHcCCceeeeecCCccccccH-----HHHHHHHHHHHH
Confidence 00 001 6899999999999998 89899999999999999999999999998763 456677888876
No 129
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.20 E-value=6.9e-10 Score=105.27 Aligned_cols=241 Identities=16% Similarity=0.128 Sum_probs=160.9
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCC--chhHHHHHhCC
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT--PTSSLIFLARR 297 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~G 297 (494)
.+++.|...+.+.||..+ ..--.|... +++|+|++.||-- .+...|.... ...+-.|+.+|
T Consensus 44 ~gy~~E~h~V~T~DgYiL-~lhRIp~~~-----~~rp~Vll~HGLl-----------~sS~~Wv~n~p~~sLaf~LadaG 106 (403)
T KOG2624|consen 44 YGYPVEEHEVTTEDGYIL-TLHRIPRGK-----KKRPVVLLQHGLL-----------ASSSSWVLNGPEQSLAFLLADAG 106 (403)
T ss_pred cCCceEEEEEEccCCeEE-EEeeecCCC-----CCCCcEEEeeccc-----------cccccceecCccccHHHHHHHcC
Confidence 356789999999999844 334445542 4489999999953 2223343332 22455789999
Q ss_pred eEEEeCCCCCCCCCCCC-----------CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC
Q 011049 298 FAVLAGPSIPIIGEGDK-----------LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP 366 (494)
Q Consensus 298 ~~v~~~~~~~~~g~g~~-----------~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p 366 (494)
|.|...|.||. -++.. +..-.|.+-...|+-+.|+++.+.- ..+++..+|||.|+.....++...|
T Consensus 107 YDVWLgN~RGn-~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T--~~~kl~yvGHSQGtt~~fv~lS~~p 183 (403)
T KOG2624|consen 107 YDVWLGNNRGN-TYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT--GQEKLHYVGHSQGTTTFFVMLSERP 183 (403)
T ss_pred CceeeecCcCc-ccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc--cccceEEEEEEccchhheehhcccc
Confidence 99999888763 23222 2333445556889999999998863 4589999999999999999988887
Q ss_pred C---ceeEEEeCCCCCCCCCC---------C-----------CC---c---------------c-c-c------------
Q 011049 367 H---LFCCGIARSGSYNKTLT---------P-----------FG---F---------------Q-T-E------------ 391 (494)
Q Consensus 367 ~---~~~a~v~~~~~~~~~~~---------~-----------~~---~---------------~-~-~------------ 391 (494)
+ +++..++.+|+.-.... . ++ + . . .
T Consensus 184 ~~~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~ 263 (403)
T KOG2624|consen 184 EYNKKIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLL 263 (403)
T ss_pred hhhhhhheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHH
Confidence 5 68888888887521100 0 00 0 0 0 0
Q ss_pred ---------------------cc--------------------ccc---ccHHHHHh-cCccccccCCCCCEEEEecCCC
Q 011049 392 ---------------------FR--------------------TLW---EATNVYIE-MSPITHANKIKKPILIIHGEVD 426 (494)
Q Consensus 392 ---------------------~~--------------------~~~---~~~~~~~~-~sp~~~~~~~~~P~li~~G~~D 426 (494)
.+ -.| .+...|.. ..|...+.++++|+.+..|.+|
T Consensus 264 ~G~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D 343 (403)
T KOG2624|consen 264 VGWNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDND 343 (403)
T ss_pred cCcchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCc
Confidence 00 000 11222222 2456778889999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc--cCCcccHHHHHHHHHHHHHHhc
Q 011049 427 DKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV--YAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 427 ~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~--~~~~~~~~~~~~~~~~fl~~~l 483 (494)
.++. ++....+...+..... ...+-+++-.|. +......+..+..+++.+.+..
T Consensus 344 ~l~~--~~DV~~~~~~~~~~~~-~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 344 WLAD--PEDVLILLLVLPNSVI-KYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred ccCC--HHHHHHHHHhcccccc-cccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 9987 8888777777766544 233337888886 3345567788999999888765
No 130
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.19 E-value=2.4e-09 Score=116.77 Aligned_cols=233 Identities=14% Similarity=0.096 Sum_probs=133.6
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCC-chhHHHHHhCCeEEEeCCCCCCCCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT-PTSSLIFLARRFAVLAGPSIPIIGEGDK 314 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~G~~v~~~~~~~~~g~g~~ 314 (494)
.+..+-|.|......++...|.||++||.+. +...|.... ......|+++||.|++++. +..+....
T Consensus 48 ~~~l~~y~~~~~~~~~~~~~~plllvhg~~~-----------~~~~~d~~~~~s~v~~L~~~g~~v~~~d~-G~~~~~~~ 115 (994)
T PRK07868 48 MYRLRRYFPPDNRPGQPPVGPPVLMVHPMMM-----------SADMWDVTRDDGAVGILHRAGLDPWVIDF-GSPDKVEG 115 (994)
T ss_pred cEEEEEeCCCCccccccCCCCcEEEECCCCC-----------CccceecCCcccHHHHHHHCCCEEEEEcC-CCCChhHc
Confidence 4555666665421111112477888999642 222233211 1124578899999999763 22111100
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC-CCceeEEEeCCCCCCCCCC-----C---
Q 011049 315 LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSYNKTLT-----P--- 385 (494)
Q Consensus 315 ~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~~~~~~~-----~--- 385 (494)
. ......+.+.++.++++.+.+... +++.++|||+||.+++.+++.+ +++++.+|.++...|.... +
T Consensus 116 ~-~~~~l~~~i~~l~~~l~~v~~~~~---~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~ 191 (994)
T PRK07868 116 G-MERNLADHVVALSEAIDTVKDVTG---RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGL 191 (994)
T ss_pred C-ccCCHHHHHHHHHHHHHHHHHhhC---CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhh
Confidence 0 011223334556666666655542 5799999999999998888754 5688888875554331100 0
Q ss_pred --C-------------Cccc-----------------------------ccc------------ccc-cc-----H---H
Q 011049 386 --F-------------GFQT-----------------------------EFR------------TLW-EA-----T---N 400 (494)
Q Consensus 386 --~-------------~~~~-----------------------------~~~------------~~~-~~-----~---~ 400 (494)
. .... +.. ..| .. . .
T Consensus 192 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~ 271 (994)
T PRK07868 192 AAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLK 271 (994)
T ss_pred hhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHH
Confidence 0 0000 000 001 00 0 0
Q ss_pred HHHhc-Ccc----------ccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEE-EEcCCCCCc--cCCcc
Q 011049 401 VYIEM-SPI----------THANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRL-VLLPFEHHV--YAARE 466 (494)
Q Consensus 401 ~~~~~-sp~----------~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~H~--~~~~~ 466 (494)
.+... ... ..+.++++|+|+++|++|..+| +..++.+.+.+.. .++ .+++++||. +....
T Consensus 272 ~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp--~~~~~~l~~~i~~----a~~~~~~~~~GH~g~~~g~~ 345 (994)
T PRK07868 272 QFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQ--PASVRGIRRAAPN----AEVYESLIRAGHFGLVVGSR 345 (994)
T ss_pred HHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCC--HHHHHHHHHhCCC----CeEEEEeCCCCCEeeeechh
Confidence 01110 111 1367888999999999999998 8888777665532 344 567899997 34456
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCCC
Q 011049 467 NVMHVIWETDRWLQKYCLSNTSDG 490 (494)
Q Consensus 467 ~~~~~~~~~~~fl~~~l~~~~~~~ 490 (494)
.....+..+.+||.++-....++.
T Consensus 346 a~~~~wp~i~~wl~~~~~~~~~~~ 369 (994)
T PRK07868 346 AAQQTWPTVADWVKWLEGDGDKPE 369 (994)
T ss_pred hhhhhChHHHHHHHHhccCCCCCc
Confidence 667889999999999877655543
No 131
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.18 E-value=8.9e-11 Score=118.71 Aligned_cols=129 Identities=18% Similarity=0.157 Sum_probs=90.8
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC-C-eEEEeCCCC-CCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-R-FAVLAGPSI-PIIGEG 312 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G-~~v~~~~~~-~~~g~g 312 (494)
-+...++.|....+.+ ++|+||++|||+|..++.. .+ ....|+.+ + ++|+.+++| +..|+.
T Consensus 78 cl~l~i~~p~~~~~~~--~~pv~v~ihGG~~~~g~~~--------~~------~~~~~~~~~~~~~vv~~~yRlg~~g~~ 141 (493)
T cd00312 78 CLYLNVYTPKNTKPGN--SLPVMVWIHGGGFMFGSGS--------LY------PGDGLAREGDNVIVVSINYRLGVLGFL 141 (493)
T ss_pred CCeEEEEeCCCCCCCC--CCCEEEEEcCCccccCCCC--------CC------ChHHHHhcCCCEEEEEecccccccccc
Confidence 4777888897643223 3899999999987654322 11 11234443 3 999998988 666664
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHh--CCCceeEEEeCCCCCC
Q 011049 313 DKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSYN 380 (494)
Q Consensus 313 ~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~~~~ 380 (494)
.........+....|+..+++|+.++ ...|+++|.|+|+|+||+++.+++.. .+.+|+++|+.+|...
T Consensus 142 ~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 142 STGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred cCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 43222222344578899999999875 23799999999999999999988876 2358999999988654
No 132
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.18 E-value=2.5e-10 Score=102.83 Aligned_cols=208 Identities=14% Similarity=0.109 Sum_probs=81.4
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC-CCCCCCCCCCchhHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP-IIGEGDKLPNDRFVEQLVSSAEAAVE 333 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~-~~g~g~~~~~~~~~~~~~~d~~~~v~ 333 (494)
.-+||++-|-+ ++.... ++....+..|...||.|+.+.-.. ..|+|. ...++.++|+.++|+
T Consensus 33 ~~~llfIGGLt-----------DGl~tv-pY~~~La~aL~~~~wsl~q~~LsSSy~G~G~-----~SL~~D~~eI~~~v~ 95 (303)
T PF08538_consen 33 PNALLFIGGLT-----------DGLLTV-PYLPDLAEALEETGWSLFQVQLSSSYSGWGT-----SSLDRDVEEIAQLVE 95 (303)
T ss_dssp SSEEEEE--TT-------------TT-S-TCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-------HHHHHHHHHHHHH
T ss_pred CcEEEEECCCC-----------CCCCCC-chHHHHHHHhccCCeEEEEEEecCccCCcCc-----chhhhHHHHHHHHHH
Confidence 45799987732 222111 222233445555799999844332 234443 345778999999999
Q ss_pred HHHHcC--CCCCCcEEEEecChHHHHHHHHHHhCC-----CceeEEEeCCCCCCCCCCCCCccc-cc-------------
Q 011049 334 EVVRRG--VADPSRIAVGGHSYGAFMTAHLLAHAP-----HLFCCGIARSGSYNKTLTPFGFQT-EF------------- 392 (494)
Q Consensus 334 ~l~~~~--~~d~~ri~i~G~S~GG~~a~~~~~~~p-----~~~~a~v~~~~~~~~~~~~~~~~~-~~------------- 392 (494)
||+... .-..++|+++|||-|-.-+++++.+.. ..+.++|+.+|++|.......... +.
T Consensus 96 ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~ 175 (303)
T PF08538_consen 96 YLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIA 175 (303)
T ss_dssp HHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHH
T ss_pred HHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHH
Confidence 999872 125689999999999999999988763 569999999999997654433211 00
Q ss_pred -c------------ccc-ccH----HHHHhcCc----------------cccccCCCCCEEEEecCCCCCCCCCHHHHHH
Q 011049 393 -R------------TLW-EAT----NVYIEMSP----------------ITHANKIKKPILIIHGEVDDKVGLFPMQAER 438 (494)
Q Consensus 393 -~------------~~~-~~~----~~~~~~sp----------------~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~ 438 (494)
+ ..+ +.+ ..+...+| .....+++.|+|++.+++|..|| +..+-+.
T Consensus 176 ~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP-~~vdk~~ 254 (303)
T PF08538_consen 176 EGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVP-PWVDKEA 254 (303)
T ss_dssp CT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT-----------
T ss_pred cCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceec-ccccccc
Confidence 0 000 000 00000111 12356678899999999999997 2334456
Q ss_pred HHHHHHhCCCc----EEEEEcCCCCCccCCcccH---HHHHHHHHHHHH
Q 011049 439 FFDALKGHGAL----SRLVLLPFEHHVYAARENV---MHVIWETDRWLQ 480 (494)
Q Consensus 439 ~~~~l~~~g~~----~~~~~~~~~~H~~~~~~~~---~~~~~~~~~fl~ 480 (494)
+.+.++..-.+ ..-.++||+.|.+...... +...+++..||+
T Consensus 255 Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 255 LLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 66776654322 2345899999998754432 245666777763
No 133
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.17 E-value=1e-09 Score=101.51 Aligned_cols=194 Identities=15% Similarity=0.147 Sum_probs=119.4
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEee-e--eccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETW-Y--KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~-~--~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+++||..++ ..|++++||++-+....|+|||||++|+|+.- . .....++|+++.++| |++++|.. +.-
T Consensus 58 ~DdlWe~sl---k~g~~~ritS~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~G--e~kRiTyf-Gr~--- 128 (668)
T COG4946 58 CDDLWEYSL---KDGKPLRITSGLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDG--EAKRITYF-GRR--- 128 (668)
T ss_pred chHHHHhhh---ccCCeeEEecccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCC--cEEEEEEe-ccc---
Confidence 567777777 88999999999888899999999999999663 2 124579999999988 99999988 433
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCC--------------------------
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG-------------------------- 147 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g-------------------------- 147 (494)
-.-+..|+|||+-|+++--.. |...-+.||.++.++.
T Consensus 129 --fT~VaG~~~dg~iiV~TD~~t---------------PF~q~~~lYkv~~dg~~~e~LnlGpathiv~~dg~ivigRnt 191 (668)
T COG4946 129 --FTRVAGWIPDGEIIVSTDFHT---------------PFSQWTELYKVNVDGIKTEPLNLGPATHIVIKDGIIVIGRNT 191 (668)
T ss_pred --cceeeccCCCCCEEEEeccCC---------------CcccceeeeEEccCCceeeeccCCceeeEEEeCCEEEEccCc
Confidence 234556999999887764321 1111122333333333
Q ss_pred ------------ceEEEEeeCcc-hhhhheeeeccCCCccccc-c--cCcEEEEEEecCCCCCeEEEEEcCCCceeEeec
Q 011049 148 ------------SKERIWESNRE-KYFETAVALVFGQGEEDIN-L--NQLKILTSKESKTEITQYHILSWPLKKSSQITN 211 (494)
Q Consensus 148 ------------~~~~l~~~~~~-~~~~~~~~~~s~~~~~~~s-~--d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~ 211 (494)
..-.||-.... ..|+.++.+ ++ .+| | -+.+++|. +.-.-...||.+++++...++-|+
T Consensus 192 ydLP~WK~YkGGtrGklWis~d~g~tFeK~vdl---~~--~vS~PmIV~~RvYFl-sD~eG~GnlYSvdldGkDlrrHTn 265 (668)
T COG4946 192 YDLPHWKGYKGGTRGKLWISSDGGKTFEKFVDL---DG--NVSSPMIVGERVYFL-SDHEGVGNLYSVDLDGKDLRRHTN 265 (668)
T ss_pred ccCcccccccCCccceEEEEecCCcceeeeeec---CC--CcCCceEEcceEEEE-ecccCccceEEeccCCchhhhcCC
Confidence 22234433211 122222221 11 111 1 13344443 233445789999999999888887
Q ss_pred CCCCCCcccccccEEEEEEcCCCceEEEEEEeCCC
Q 011049 212 FPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPG 246 (494)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~ 246 (494)
+..-.+......-++|.|.. .| ..++|-|..
T Consensus 266 FtdYY~R~~nsDGkrIvFq~-~G---dIylydP~t 296 (668)
T COG4946 266 FTDYYPRNANSDGKRIVFQN-AG---DIYLYDPET 296 (668)
T ss_pred chhccccccCCCCcEEEEec-CC---cEEEeCCCc
Confidence 76555544444455666653 22 346666754
No 134
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.17 E-value=7.3e-11 Score=97.18 Aligned_cols=172 Identities=22% Similarity=0.252 Sum_probs=106.8
Q ss_pred CeEEEeCCCCCCCCCCCCCCCc-hh-HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEe
Q 011049 297 RFAVLAGPSIPIIGEGDKLPND-RF-VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA 374 (494)
Q Consensus 297 G~~v~~~~~~~~~g~g~~~~~~-~~-~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 374 (494)
-+.+++.| -.|||.+-+.. ++ .+...+|...+++-+.... -.++.|+|||-||..|+.+|+++++.+...|.
T Consensus 71 ~~TivawD---PpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk---~~~fsvlGWSdGgiTalivAak~~e~v~rmii 144 (277)
T KOG2984|consen 71 QVTIVAWD---PPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALK---LEPFSVLGWSDGGITALIVAAKGKEKVNRMII 144 (277)
T ss_pred ceEEEEEC---CCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhC---CCCeeEeeecCCCeEEEEeeccChhhhhhhee
Confidence 37788744 45777774432 22 3445677788888776654 48899999999999999999999988766665
Q ss_pred CCCCCCCC-C-----------CCCCccc-----------ccccccccH----HHHHhc---Cc-cccccCCCCCEEEEec
Q 011049 375 RSGSYNKT-L-----------TPFGFQT-----------EFRTLWEAT----NVYIEM---SP-ITHANKIKKPILIIHG 423 (494)
Q Consensus 375 ~~~~~~~~-~-----------~~~~~~~-----------~~~~~~~~~----~~~~~~---sp-~~~~~~~~~P~li~~G 423 (494)
..+..-.. . ..|.-.. .....|... ..+... .. ...+.++++|+||+||
T Consensus 145 wga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG 224 (277)
T KOG2984|consen 145 WGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHG 224 (277)
T ss_pred ecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeC
Confidence 54432100 0 0010000 001111100 000000 00 1246789999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 424 EVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 424 ~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
++|+.|+ -.+. .+...++. -.++.++|..+|.+.. ...+.+...+.+||++
T Consensus 225 ~kDp~~~--~~hv-~fi~~~~~---~a~~~~~peGkHn~hL-rya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 225 GKDPFCG--DPHV-CFIPVLKS---LAKVEIHPEGKHNFHL-RYAKEFNKLVLDFLKS 275 (277)
T ss_pred CcCCCCC--CCCc-cchhhhcc---cceEEEccCCCcceee-echHHHHHHHHHHHhc
Confidence 9999986 4433 34444433 3689999999999874 4455677778888875
No 135
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.16 E-value=5.6e-09 Score=91.82 Aligned_cols=126 Identities=24% Similarity=0.248 Sum_probs=79.9
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccC
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANK 413 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~ 413 (494)
++.+...+|++|.+|+|||+||.+++.++..+|+.|.+.++.+|-.- |.+...+....-.... +
T Consensus 127 ~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW---------------w~n~~~l~~~~~~~~~-~ 190 (264)
T COG2819 127 FIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW---------------WHNEAILREIESLKLL-K 190 (264)
T ss_pred HHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh---------------hCCHHHhccccccccC-C
Confidence 34444668999999999999999999999999999999999998432 2333333332222222 2
Q ss_pred CCCCEEEEe--cCCCCCCC----CCHHHHHHHHHHHHh-CCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 414 IKKPILIIH--GEVDDKVG----LFPMQAERFFDALKG-HGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 414 ~~~P~li~~--G~~D~~v~----~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
..+++|.. |+.|.-.. ....++.+..+.+++ .|..+.+..+|+++|+-. ....+..++.|+.
T Consensus 191 -~~~i~l~iG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~~~~~~~H~~~----~~~~~~~al~~l~ 259 (264)
T COG2819 191 -TKRICLYIGSGELDSSRSIRMAENKQEAAELSSLLEKRTGARLVFQEEPLEHHGSV----IHASLPSALRFLD 259 (264)
T ss_pred -CcceEEEecccccCcchhhhhhhHHHHHHHHHHHHhhccCCceEecccccccccch----HHHHHHHHHHhhh
Confidence 33444444 44443110 013345566666777 788889999999899633 2234444555553
No 136
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.15 E-value=4.8e-10 Score=102.81 Aligned_cols=217 Identities=19% Similarity=0.152 Sum_probs=122.9
Q ss_pred cEEEEEEcC-CCceEEEEEEeCCCCCC-CCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEE
Q 011049 224 KEMIKYQRK-DGVPLTATLYLPPGYDQ-SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 301 (494)
Q Consensus 224 ~~~~~~~~~-dg~~~~~~l~~P~~~~~-~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 301 (494)
...+++... .+.+++.++++|..... -..+++|+|++.||.+- ....| .+.+..|++.||+|.
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs-----------~~~~f----~~~A~~lAs~Gf~Va 102 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGS-----------YVTGF----AWLAEHLASYGFVVA 102 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCC-----------Cccch----hhhHHHHhhCceEEE
Confidence 444555443 35688999999976422 11246999999999541 11222 256778999999999
Q ss_pred eCCCCCCCCCCCCC---------CCchhHHHHHHHHHHHHHHHHHc---C----CCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 302 AGPSIPIIGEGDKL---------PNDRFVEQLVSSAEAAVEEVVRR---G----VADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 302 ~~~~~~~~g~g~~~---------~~~~~~~~~~~d~~~~v~~l~~~---~----~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
.++.-++. .|... ....| -+...|+...+++|.+. + .+|+.+|+++|||+||+.++.++.-+
T Consensus 103 ~~~hpgs~-~~~~~~~~~~~~~~~p~~~-~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~ 180 (365)
T COG4188 103 APDHPGSN-AGGAPAAYAGPGSYAPAEW-WERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAE 180 (365)
T ss_pred eccCCCcc-cccCChhhcCCcccchhhh-hcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccc
Confidence 85553321 12110 11122 23467888999999887 4 47899999999999999999987655
Q ss_pred CCc---eeEEEe---CCCCCCCCCCCCCcccccccccccHHHHHhcCcc-----------------ccccCCCCCEEEEe
Q 011049 366 PHL---FCCGIA---RSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPI-----------------THANKIKKPILIIH 422 (494)
Q Consensus 366 p~~---~~a~v~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~-----------------~~~~~~~~P~li~~ 422 (494)
.+. ...+.. .+.-.. ........+....|.....|...+|. .-+.+++.|++++.
T Consensus 181 ~~~~~~~~~C~~~~~~~~~~~--~~~~~~l~q~~av~~~~~~~~~rDpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a 258 (365)
T COG4188 181 LDAEALLQHCESASRICLDPP--GLNGRLLNQCAAVWLPRQAYDLRDPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAA 258 (365)
T ss_pred ccHHHHHHHhhhhhhcccCCC--CcChhhhccccccccchhhhccccccceeeeeccCCcccccccccceeeecceeeec
Confidence 331 111110 000000 00000001111122222223222221 12567889999999
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCcc
Q 011049 423 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY 462 (494)
Q Consensus 423 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 462 (494)
|..|...| +..+....+..|.. ....+...|++.|.-
T Consensus 259 ~s~D~~aP-~~~~~~~~f~~l~g--~~k~~~~vp~a~h~s 295 (365)
T COG4188 259 GSADGFAP-PVTEQIRPFGYLPG--ALKYLRLVPGATHFS 295 (365)
T ss_pred ccccccCC-cccccccccccCCc--chhheeecCCCcccc
Confidence 99999765 22333333343432 223567788889963
No 137
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.10 E-value=1.9e-09 Score=95.19 Aligned_cols=191 Identities=18% Similarity=0.157 Sum_probs=118.0
Q ss_pred CCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCC-------------CC----
Q 011049 252 DGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG-------------DK---- 314 (494)
Q Consensus 252 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g-------------~~---- 314 (494)
.+++|+||+-||-+ + ++.++......||++||+|.++..|+....- .+
T Consensus 115 ~~k~PvvvFSHGLg-----------g----sRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ 179 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLG-----------G----SRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIK 179 (399)
T ss_pred CCCccEEEEecccc-----------c----chhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceE
Confidence 45699999999954 2 2223334566889999999997776643210 00
Q ss_pred ----CCCch-h------HHHHHHHHHHHHHHHHHc---------------------CCCCCCcEEEEecChHHHHHHHHH
Q 011049 315 ----LPNDR-F------VEQLVSSAEAAVEEVVRR---------------------GVADPSRIAVGGHSYGAFMTAHLL 362 (494)
Q Consensus 315 ----~~~~~-~------~~~~~~d~~~~v~~l~~~---------------------~~~d~~ri~i~G~S~GG~~a~~~~ 362 (494)
..+.. + ...-+.++..|+.-|.+. +.+|..+++|+|||+||..++...
T Consensus 180 ir~v~~~ekef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~s 259 (399)
T KOG3847|consen 180 IRLVEANEKEFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASS 259 (399)
T ss_pred eeeeccCceeEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhh
Confidence 00111 0 112245555555544331 235677899999999999999888
Q ss_pred HhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHH
Q 011049 363 AHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDA 442 (494)
Q Consensus 363 ~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~ 442 (494)
+.+ ..|+|+|+..++. +.-+. .+..+++-|+|+|.- .|.. ..++....++
T Consensus 260 s~~-t~FrcaI~lD~WM--------~Pl~~----------------~~~~~arqP~~finv-~~fQ----~~en~~vmKk 309 (399)
T KOG3847|consen 260 SSH-TDFRCAIALDAWM--------FPLDQ----------------LQYSQARQPTLFINV-EDFQ----WNENLLVMKK 309 (399)
T ss_pred ccc-cceeeeeeeeeee--------cccch----------------hhhhhccCCeEEEEc-cccc----chhHHHHHHh
Confidence 887 7899999987642 11110 123456789999883 3443 3345555566
Q ss_pred HHhCCCcEEEEEcCCCCCccC------------------C----cccHHHHHHHHHHHHHHhcCCCC
Q 011049 443 LKGHGALSRLVLLPFEHHVYA------------------A----RENVMHVIWETDRWLQKYCLSNT 487 (494)
Q Consensus 443 l~~~g~~~~~~~~~~~~H~~~------------------~----~~~~~~~~~~~~~fl~~~l~~~~ 487 (494)
....+..-.++++.|.-|.-. . .+......+..++||++|+...+
T Consensus 310 i~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~dpy~~~~~~~r~slaFLq~h~d~~q 376 (399)
T KOG3847|consen 310 IESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETDPYEAMQIAIRASLAFLQKHLDLVQ 376 (399)
T ss_pred hhCCCccceEEEEccceecccccCccccHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHhhhhhhc
Confidence 655555557888888888421 0 11223455678999999986543
No 138
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.08 E-value=1.2e-08 Score=101.19 Aligned_cols=88 Identities=11% Similarity=0.051 Sum_probs=59.1
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHH----HHHH
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTA----HLLA 363 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~----~~~~ 363 (494)
.....|+++||.|++++-+ |.|.+.....+.+...+++.++++.+.+.- ..+++.++|||+||.+++ .+++
T Consensus 211 Slv~~L~~qGf~V~~iDwr---gpg~s~~~~~~ddY~~~~i~~al~~v~~~~--g~~kv~lvG~cmGGtl~a~ala~~aa 285 (532)
T TIGR01838 211 SLVRWLVEQGHTVFVISWR---NPDASQADKTFDDYIRDGVIAALEVVEAIT--GEKQVNCVGYCIGGTLLSTALAYLAA 285 (532)
T ss_pred HHHHHHHHCCcEEEEEECC---CCCcccccCChhhhHHHHHHHHHHHHHHhc--CCCCeEEEEECcCcHHHHHHHHHHHH
Confidence 3566889999999986654 344332222222333456778888887652 457899999999999852 2344
Q ss_pred hC-CCceeEEEeCCCCCC
Q 011049 364 HA-PHLFCCGIARSGSYN 380 (494)
Q Consensus 364 ~~-p~~~~a~v~~~~~~~ 380 (494)
.+ ++++++++.++...|
T Consensus 286 ~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 286 RGDDKRIKSATFFTTLLD 303 (532)
T ss_pred hCCCCccceEEEEecCcC
Confidence 54 678998888776655
No 139
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.04 E-value=1.2e-08 Score=93.58 Aligned_cols=219 Identities=16% Similarity=0.090 Sum_probs=123.3
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEe--CCCCCCCCC--
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA--GPSIPIIGE-- 311 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~--~~~~~~~g~-- 311 (494)
..+..+++|+..++.. .|++|++.|.| + ..|.......+..|+..|++.+. .++++.+--
T Consensus 76 ~a~~~~~~P~~~~~~~---rp~~IhLagTG------------D-h~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~ 139 (348)
T PF09752_consen 76 TARFQLLLPKRWDSPY---RPVCIHLAGTG------------D-HGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKD 139 (348)
T ss_pred heEEEEEECCccccCC---CceEEEecCCC------------c-cchhhhhhhhhhHHHHcCcceEEEecccccccChhH
Confidence 4566677788753322 79999999864 1 11222222235567778988776 333322110
Q ss_pred --CCCCCC-chh---HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC---
Q 011049 312 --GDKLPN-DRF---VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT--- 382 (494)
Q Consensus 312 --g~~~~~-~~~---~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~--- 382 (494)
+..... .+. ....+.+....++|+.++|+ .+++|.|.||||.+|..+++.+|..+.++-..++.+...
T Consensus 140 Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~G~---~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt 216 (348)
T PF09752_consen 140 QRRSSLRNVSDLFVMGRATILESRALLHWLEREGY---GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFT 216 (348)
T ss_pred hhcccccchhHHHHHHhHHHHHHHHHHHHHHhcCC---CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchh
Confidence 000000 011 23457888899999999986 699999999999999999999998765554444432210
Q ss_pred ------CCCCCc-ccc---------c---------------ccccccHHH----HHhcCccccccCCCC-----CEEEEe
Q 011049 383 ------LTPFGF-QTE---------F---------------RTLWEATNV----YIEMSPITHANKIKK-----PILIIH 422 (494)
Q Consensus 383 ------~~~~~~-~~~---------~---------------~~~~~~~~~----~~~~sp~~~~~~~~~-----P~li~~ 422 (494)
...|.. ..+ . ...+.+.+. ....+-..++.+..+ .+.++.
T Consensus 217 ~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~ 296 (348)
T PF09752_consen 217 EGVLSNSINWDALEKQFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVA 296 (348)
T ss_pred hhhhhcCCCHHHHHHHhcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEE
Confidence 011110 000 0 000011111 111233344555443 378899
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 423 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 423 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+++|..|| ..+.. .|++.=..+++.++++ ||.-.....+..+.+.|.+=|+
T Consensus 297 A~~DaYVP--r~~v~----~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 297 AKNDAYVP--RHGVL----SLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred ecCceEec--hhhcc----hHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 99999997 66544 4554434467777877 9974433444455555655443
No 140
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.03 E-value=2.2e-10 Score=103.41 Aligned_cols=155 Identities=24% Similarity=0.257 Sum_probs=95.5
Q ss_pred eEEEeCCCCCCCCCCCCCC--CchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeC
Q 011049 298 FAVLAGPSIPIIGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 375 (494)
Q Consensus 298 ~~v~~~~~~~~~g~g~~~~--~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~ 375 (494)
|.|+++|.+ |.|.+.. ...+......|+.+.++.+++.-.+ +++.++||||||.+++.++..+|++++++|+.
T Consensus 1 f~vi~~d~r---G~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~ 75 (230)
T PF00561_consen 1 FDVILFDLR---GFGYSSPHWDPDFPDYTTDDLAADLEALREALGI--KKINLVGHSMGGMLALEYAAQYPERVKKLVLI 75 (230)
T ss_dssp EEEEEEECT---TSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEE
T ss_pred CEEEEEeCC---CCCCCCCCccCCcccccHHHHHHHHHHHHHHhCC--CCeEEEEECCChHHHHHHHHHCchhhcCcEEE
Confidence 567775554 4555543 1222223355666667777665333 45999999999999999999999999999998
Q ss_pred CCCC--C----CCCCCC-Ccc------------------------------cc-ccc--------cccc-----------
Q 011049 376 SGSY--N----KTLTPF-GFQ------------------------------TE-FRT--------LWEA----------- 398 (494)
Q Consensus 376 ~~~~--~----~~~~~~-~~~------------------------------~~-~~~--------~~~~----------- 398 (494)
+++. . ...... .+. .. ... .+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (230)
T PF00561_consen 76 SPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMF 155 (230)
T ss_dssp SESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred eeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhc
Confidence 8851 0 000000 000 00 000 0000
Q ss_pred ---HHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC
Q 011049 399 ---TNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 399 ---~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 463 (494)
...+...++...+.++++|+|+++|++|..+| +.....+.+.+. ..+++++++.||...
T Consensus 156 ~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p--~~~~~~~~~~~~----~~~~~~~~~~GH~~~ 217 (230)
T PF00561_consen 156 WNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVP--PESSEQLAKLIP----NSQLVLIEGSGHFAF 217 (230)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSH--HHHHHHHHHHST----TEEEEEETTCCSTHH
T ss_pred cccccccccccccccccccCCCeEEEEeCCCCCCC--HHHHHHHHHhcC----CCEEEECCCCChHHH
Confidence 00111223334567799999999999999987 776666444433 378999999999864
No 141
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=99.03 E-value=1.7e-08 Score=93.89 Aligned_cols=76 Identities=16% Similarity=0.077 Sum_probs=46.4
Q ss_pred CCCCCeeccccc-----cccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeC
Q 011049 29 EGEKPEILHKLD-----LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRT 103 (494)
Q Consensus 29 ~~~~~~~lt~~~-----~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~s 103 (494)
.|-+.+|||..+ .++..+.|++||++|+|.+.+++ ..++|.++++++ +.+|||+.++.+. +-.++|
T Consensus 19 TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg-~~nly~lDL~t~--~i~QLTdg~g~~~------~g~~~s 89 (386)
T PF14583_consen 19 TGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDG-NRNLYLLDLATG--EITQLTDGPGDNT------FGGFLS 89 (386)
T ss_dssp T--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTS-S-EEEEEETTT---EEEE---SS-B-T------TT-EE-
T ss_pred CCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCC-CcceEEEEcccC--EEEECccCCCCCc------cceEEe
Confidence 566788898755 47778999999999999998877 889999999998 9999999887542 112379
Q ss_pred CCCCEEEEEE
Q 011049 104 STGTNVIAKI 113 (494)
Q Consensus 104 pDG~~i~~~~ 113 (494)
|+++.++|..
T Consensus 90 ~~~~~~~Yv~ 99 (386)
T PF14583_consen 90 PDDRALYYVK 99 (386)
T ss_dssp TTSSEEEEEE
T ss_pred cCCCeEEEEE
Confidence 9999998864
No 142
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.99 E-value=1.1e-09 Score=103.74 Aligned_cols=127 Identities=22% Similarity=0.199 Sum_probs=87.9
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCC-eEEEeCCCC-CCCCCC--
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLAGPSI-PIIGEG-- 312 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~~~~-~~~g~g-- 312 (494)
+...++.|+ . +. .+.|||||+|||++..++.+... +....|+++| ++|+.+|+| |..|+=
T Consensus 80 L~LNIwaP~-~-~a--~~~PVmV~IHGG~y~~Gs~s~~~------------ydgs~La~~g~vVvVSvNYRLG~lGfL~~ 143 (491)
T COG2272 80 LYLNIWAPE-V-PA--EKLPVMVYIHGGGYIMGSGSEPL------------YDGSALAARGDVVVVSVNYRLGALGFLDL 143 (491)
T ss_pred eeEEeeccC-C-CC--CCCcEEEEEeccccccCCCcccc------------cChHHHHhcCCEEEEEeCcccccceeeeh
Confidence 777888898 2 22 23899999999987665443211 2345778888 999988886 333321
Q ss_pred CCCC--CchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhCC---CceeEEEeCCCCCC
Q 011049 313 DKLP--NDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGSYN 380 (494)
Q Consensus 313 ~~~~--~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~p---~~~~a~v~~~~~~~ 380 (494)
.+.. .....+....|++.+++|+.++ ..-||++|.|+|.|.|++.++.+++. | .+|+.+|+.+|...
T Consensus 144 ~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 144 SSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred hhccccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 0001 1111123578999999999875 33699999999999999999888775 4 37888888887653
No 143
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.97 E-value=8.9e-09 Score=99.04 Aligned_cols=180 Identities=9% Similarity=-0.002 Sum_probs=109.4
Q ss_pred CCCCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 12 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
...+..+.+|+.|+ +.++.++|+........+.|||||+.|+|+. +++||+.++.++ +.++||.......
T Consensus 17 ~r~s~~~~y~i~d~---~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~-----~~nly~~~~~~~--~~~~lT~dg~~~i 86 (353)
T PF00930_consen 17 WRHSFKGDYYIYDI---ETGEITPLTPPPPKLQDAKWSPDGKYIAFVR-----DNNLYLRDLATG--QETQLTTDGEPGI 86 (353)
T ss_dssp SSSEEEEEEEEEET---TTTEEEESS-EETTBSEEEE-SSSTEEEEEE-----TTEEEEESSTTS--EEEESES--TTTE
T ss_pred eeeccceeEEEEec---CCCceEECcCCccccccceeecCCCeeEEEe-----cCceEEEECCCC--CeEEeccccceeE
Confidence 44567789999999 8888899988877778899999999999985 568999999887 8888988541110
Q ss_pred c-----------CCCCCCceeeCCCCCEEEEEEeccCccc-----------------eEEEEccCCCCCCCCCCceEeee
Q 011049 92 Y-----------SDPGSPMMTRTSTGTNVIAKIKKENDEQ-----------------IYILLNGRGFTPEGNIPFLDLFD 143 (494)
Q Consensus 92 ~-----------~~~~~~~~~~spDG~~i~~~~~~~~~~~-----------------~~~~~~~~g~~~~~~~~~l~~~d 143 (494)
+ .......+.|||||++|+|......... ..+.|..-|.. .....|+++|
T Consensus 87 ~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~--np~v~l~v~~ 164 (353)
T PF00930_consen 87 YNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDP--NPRVSLFVVD 164 (353)
T ss_dssp EESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS-----EEEEEEEE
T ss_pred EcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCc--CCceEEEEEE
Confidence 0 0112334569999999999875433211 12233333322 1234688899
Q ss_pred cCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecC-CCCCeEEEEEcCCCceeEe
Q 011049 144 INTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK-TEITQYHILSWPLKKSSQI 209 (494)
Q Consensus 144 ~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~-~~p~~l~~~~~~~~~~~~l 209 (494)
+++++...+-.... .......+ ....|++|+..+++...+. ..-..+.+++..++..+.+
T Consensus 165 ~~~~~~~~~~~~~~--~~~~~~yl----~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~ 225 (353)
T PF00930_consen 165 LASGKTTELDPPNS--LNPQDYYL----TRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVV 225 (353)
T ss_dssp SSSTCCCEE---HH--HHTSSEEE----EEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEE
T ss_pred CCCCcEEEeeeccc--cCCCccCc----ccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEE
Confidence 99987654322210 00011111 1348889988666665543 3344688888877665544
No 144
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.96 E-value=1.3e-07 Score=81.10 Aligned_cols=207 Identities=18% Similarity=0.168 Sum_probs=109.0
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
+.-.+|..|..|-.+|+.-.+.+ .|.|++..|-+ ...+.| ...+.+|+..||.|+..+....
T Consensus 7 i~~~~~~~I~vwet~P~~~~~~~---~~tiliA~Gf~-----------rrmdh~----agLA~YL~~NGFhViRyDsl~H 68 (294)
T PF02273_consen 7 IRLEDGRQIRVWETRPKNNEPKR---NNTILIAPGFA-----------RRMDHF----AGLAEYLSANGFHVIRYDSLNH 68 (294)
T ss_dssp EEETTTEEEEEEEE---TTS------S-EEEEE-TT------------GGGGGG----HHHHHHHHTTT--EEEE---B-
T ss_pred eEcCCCCEEEEeccCCCCCCccc---CCeEEEecchh-----------HHHHHH----HHHHHHHhhCCeEEEecccccc
Confidence 44578999999999998755544 68999887621 111112 2356688999999998666544
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCC----
Q 011049 309 IGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT---- 384 (494)
Q Consensus 309 ~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~---- 384 (494)
.|................|+..+++||.+.+. .+++++..|.-|-+|+..++.- + ..-+|...|+.|...+
T Consensus 69 vGlSsG~I~eftms~g~~sL~~V~dwl~~~g~---~~~GLIAaSLSaRIAy~Va~~i-~-lsfLitaVGVVnlr~TLe~a 143 (294)
T PF02273_consen 69 VGLSSGDINEFTMSIGKASLLTVIDWLATRGI---RRIGLIAASLSARIAYEVAADI-N-LSFLITAVGVVNLRDTLEKA 143 (294)
T ss_dssp ------------HHHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHHHHH
T ss_pred ccCCCCChhhcchHHhHHHHHHHHHHHHhcCC---CcchhhhhhhhHHHHHHHhhcc-C-cceEEEEeeeeeHHHHHHHH
Confidence 44322223333455678899999999998885 7799999999999999999854 4 5666666688773210
Q ss_pred ----CCCccccc--------ccccccHHHHH----------hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHH
Q 011049 385 ----PFGFQTEF--------RTLWEATNVYI----------EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDA 442 (494)
Q Consensus 385 ----~~~~~~~~--------~~~~~~~~~~~----------~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~ 442 (494)
......+. +.. -..+.|. ..|....++.+.+|++.+++++|..|. ..+..++...
T Consensus 144 l~~Dyl~~~i~~lp~dldfeGh~-l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~--q~eV~~~~~~ 220 (294)
T PF02273_consen 144 LGYDYLQLPIEQLPEDLDFEGHN-LGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVK--QSEVEELLDN 220 (294)
T ss_dssp HSS-GGGS-GGG--SEEEETTEE-EEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS---HHHHHHHHTT
T ss_pred hccchhhcchhhCCCcccccccc-cchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCcccc--HHHHHHHHHh
Confidence 00000000 000 0111111 113455677889999999999999986 6655555554
Q ss_pred HHhCCCcEEEEEcCCCCCccC
Q 011049 443 LKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 443 l~~~g~~~~~~~~~~~~H~~~ 463 (494)
+.. ..+++...+|..|.+.
T Consensus 221 ~~s--~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 221 INS--NKCKLYSLPGSSHDLG 239 (294)
T ss_dssp -TT----EEEEEETT-SS-TT
T ss_pred cCC--CceeEEEecCccchhh
Confidence 433 3588999999999886
No 145
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.95 E-value=1.6e-08 Score=91.42 Aligned_cols=203 Identities=16% Similarity=0.098 Sum_probs=118.3
Q ss_pred CCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEEeCCCCCCCCCCCCCCC-chhHHHHHHHHHHH
Q 011049 254 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAA 331 (494)
Q Consensus 254 ~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~-~~~~~~~~~d~~~~ 331 (494)
+.|.++.+||- .|+...|... ...|+. .|-.|+.++.| -+|.+..- .-....+.+|+...
T Consensus 51 ~~Pp~i~lHGl-----------~GS~~Nw~sv----~k~Ls~~l~~~v~~vd~R---nHG~Sp~~~~h~~~~ma~dv~~F 112 (315)
T KOG2382|consen 51 RAPPAIILHGL-----------LGSKENWRSV----AKNLSRKLGRDVYAVDVR---NHGSSPKITVHNYEAMAEDVKLF 112 (315)
T ss_pred CCCceEEeccc-----------ccCCCCHHHH----HHHhcccccCceEEEecc---cCCCCccccccCHHHHHHHHHHH
Confidence 37889999994 3443444332 223333 34456654443 33433221 11146778888888
Q ss_pred HHHHHHcCCCCCCcEEEEecChHH-HHHHHHHHhCCCceeEEEe--CCC-CCCCC---------------CC---CCC--
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGA-FMTAHLLAHAPHLFCCGIA--RSG-SYNKT---------------LT---PFG-- 387 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG-~~a~~~~~~~p~~~~a~v~--~~~-~~~~~---------------~~---~~~-- 387 (494)
++........ .++.++|||||| -+++..+...|++..-+|. ++| .+... .. ..+
T Consensus 113 i~~v~~~~~~--~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rk 190 (315)
T KOG2382|consen 113 IDGVGGSTRL--DPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRK 190 (315)
T ss_pred HHHccccccc--CCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHH
Confidence 8877654332 568999999999 7777777888887655554 333 11100 00 000
Q ss_pred ----------------------cc---ccccccccc-----HHHHH---hcCccccc--cCCCCCEEEEecCCCCCCCCC
Q 011049 388 ----------------------FQ---TEFRTLWEA-----TNVYI---EMSPITHA--NKIKKPILIIHGEVDDKVGLF 432 (494)
Q Consensus 388 ----------------------~~---~~~~~~~~~-----~~~~~---~~sp~~~~--~~~~~P~li~~G~~D~~v~~~ 432 (494)
+. ......|.. .+.+. ..+.-..+ .....|+|+++|.++..++
T Consensus 191 e~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~-- 268 (315)
T KOG2382|consen 191 EALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVP-- 268 (315)
T ss_pred HHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcC--
Confidence 00 000011210 11121 22222222 4456899999999999997
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhc
Q 011049 433 PMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 483 (494)
Q Consensus 433 ~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l 483 (494)
.++-.++.+.+ ..++++.++++||+.. .++++.+.+.+.+|+.++.
T Consensus 269 ~~~~~~~~~~f----p~~e~~~ld~aGHwVh-~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 269 DEHYPRMEKIF----PNVEVHELDEAGHWVH-LEKPEEFIESISEFLEEPE 314 (315)
T ss_pred hhHHHHHHHhc----cchheeecccCCceee-cCCHHHHHHHHHHHhcccC
Confidence 55444444433 3489999999999988 4888999999999987653
No 146
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.94 E-value=1.1e-07 Score=75.69 Aligned_cols=168 Identities=15% Similarity=0.117 Sum_probs=95.9
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC--CCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG--PSIPIIGEGDKLPNDRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~--~~~~~~g~g~~~~~~~~~~~~~~d~~~~v 332 (494)
.-+||+.||.|.+. + +......+..|+.+|+.|... +|+-.+-.|...+.... .......+.++
T Consensus 14 ~~tilLaHGAGasm-----------d--St~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~-~t~~~~~~~~~ 79 (213)
T COG3571 14 PVTILLAHGAGASM-----------D--STSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGS-GTLNPEYIVAI 79 (213)
T ss_pred CEEEEEecCCCCCC-----------C--CHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCcc-ccCCHHHHHHH
Confidence 34678899875221 1 111223455788999999862 33222222321111000 11111223344
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCcccccc
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHAN 412 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~ 412 (494)
-.|.+. .+..++.+.|+||||-++.+++..--..+.+.+++.=.+. +.+- ++.. -..++.
T Consensus 80 aql~~~--l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfh----ppGK----------Pe~~----Rt~HL~ 139 (213)
T COG3571 80 AQLRAG--LAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFH----PPGK----------PEQL----RTEHLT 139 (213)
T ss_pred HHHHhc--ccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccC----CCCC----------cccc----hhhhcc
Confidence 445554 3456899999999999998887654344666666532211 1111 1111 123677
Q ss_pred CCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC
Q 011049 413 KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 413 ~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 463 (494)
.+++|+||.||+.|+.-. .++. ....- ..+++++++.++.|.+.
T Consensus 140 gl~tPtli~qGtrD~fGt--r~~V---a~y~l--s~~iev~wl~~adHDLk 183 (213)
T COG3571 140 GLKTPTLITQGTRDEFGT--RDEV---AGYAL--SDPIEVVWLEDADHDLK 183 (213)
T ss_pred CCCCCeEEeecccccccC--HHHH---Hhhhc--CCceEEEEeccCccccc
Confidence 889999999999999865 4443 22222 35689999999999864
No 147
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.90 E-value=7.7e-08 Score=82.27 Aligned_cols=133 Identities=12% Similarity=0.107 Sum_probs=76.3
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC---CCc---ccccccccccHHHHH
Q 011049 330 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP---FGF---QTEFRTLWEATNVYI 403 (494)
Q Consensus 330 ~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~ 403 (494)
+.++.++++. .++.+.++|.|+||+.|.+++.+++ +++ |+++|.+.....- .+. .......+-....+.
T Consensus 47 ~~l~~~i~~~--~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~ 121 (187)
T PF05728_consen 47 AQLEQLIEEL--KPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIE 121 (187)
T ss_pred HHHHHHHHhC--CCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhh
Confidence 3344444443 2345999999999999999999883 445 7778876521100 000 000000111112222
Q ss_pred hcCccccc-cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 404 EMSPITHA-NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 404 ~~sp~~~~-~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
....+... ..-..++++++++.|.+++ +.++. +..+. +...+.+|.+|.+.. .++.+..+.+|+
T Consensus 122 ~l~~l~~~~~~~~~~~lvll~~~DEvLd--~~~a~---~~~~~----~~~~i~~ggdH~f~~---f~~~l~~i~~f~ 186 (187)
T PF05728_consen 122 ELKALEVPYPTNPERYLVLLQTGDEVLD--YREAV---AKYRG----CAQIIEEGGDHSFQD---FEEYLPQIIAFL 186 (187)
T ss_pred hcceEeccccCCCccEEEEEecCCcccC--HHHHH---HHhcC----ceEEEEeCCCCCCcc---HHHHHHHHHHhh
Confidence 22222211 1224689999999999988 65543 33332 344566888999864 557778888886
No 148
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.88 E-value=1.6e-07 Score=87.66 Aligned_cols=201 Identities=15% Similarity=0.140 Sum_probs=111.7
Q ss_pred EEEEEEe-CCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCC
Q 011049 237 LTATLYL-PPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL 315 (494)
Q Consensus 237 ~~~~l~~-P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~ 315 (494)
-..|++. |..+.++. -|+||++||||+.-... +..+..+ .....+.. ..+++..+|. ....+ .
T Consensus 106 ~s~Wlvk~P~~~~pk~---DpVlIYlHGGGY~l~~~-------p~qi~~L--~~i~~~l~-~~SILvLDYs-Lt~~~--~ 169 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKS---DPVLIYLHGGGYFLGTT-------PSQIEFL--LNIYKLLP-EVSILVLDYS-LTSSD--E 169 (374)
T ss_pred ceEEEEeCCcccCCCC---CcEEEEEcCCeeEecCC-------HHHHHHH--HHHHHHcC-CCeEEEEecc-ccccc--c
Confidence 3468887 76655543 49999999998532110 0001000 00111122 3456655552 21100 1
Q ss_pred CCchhHHHHHHHHHHHHHHHH-HcCCCCCCcEEEEecChHHHHHHHHHHhCC-----CceeEEEeCCCCCCCCCCCC---
Q 011049 316 PNDRFVEQLVSSAEAAVEEVV-RRGVADPSRIAVGGHSYGAFMTAHLLAHAP-----HLFCCGIARSGSYNKTLTPF--- 386 (494)
Q Consensus 316 ~~~~~~~~~~~d~~~~v~~l~-~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p-----~~~~a~v~~~~~~~~~~~~~--- 386 (494)
.+..+. ....++.+..++|. +.+. ++|.++|-|+||.+++.++.+-. -.-+.+|+++|+.+......
T Consensus 170 ~~~~yP-tQL~qlv~~Y~~Lv~~~G~---~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~ 245 (374)
T PF10340_consen 170 HGHKYP-TQLRQLVATYDYLVESEGN---KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEG 245 (374)
T ss_pred CCCcCc-hHHHHHHHHHHHHHhccCC---CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCC
Confidence 122232 33667788999999 5553 78999999999999988765421 12489999999987542110
Q ss_pred C-cc-ccccc--cc----ccHHHHH---------hcCcccccc---------C--CCCCEEEEecCCCCCCCCCHHHHHH
Q 011049 387 G-FQ-TEFRT--LW----EATNVYI---------EMSPITHAN---------K--IKKPILIIHGEVDDKVGLFPMQAER 438 (494)
Q Consensus 387 ~-~~-~~~~~--~~----~~~~~~~---------~~sp~~~~~---------~--~~~P~li~~G~~D~~v~~~~~~~~~ 438 (494)
. +. .+... .+ ...+.|. ...|..... . -+.-++++.|+++-. .++..+
T Consensus 246 ~~~~~n~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~Evf----rddI~~ 321 (374)
T PF10340_consen 246 SSYHDNEKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVF----RDDILE 321 (374)
T ss_pred ccccccccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCcccc----HHHHHH
Confidence 0 00 00000 00 0001111 111111111 1 135799999999876 788999
Q ss_pred HHHHHHhCCC-----cEEEEEcCCCCCc
Q 011049 439 FFDALKGHGA-----LSRLVLLPFEHHV 461 (494)
Q Consensus 439 ~~~~l~~~g~-----~~~~~~~~~~~H~ 461 (494)
+.+.+.+.+. ..+..+.+++.|-
T Consensus 322 ~~~~~~~~~~~~~~~~~nv~~~~~G~Hi 349 (374)
T PF10340_consen 322 WAKKLNDVKPNKFSNSNNVYIDEGGIHI 349 (374)
T ss_pred HHHHHhhcCccccCCcceEEEecCCccc
Confidence 9999986543 3677888888885
No 149
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.88 E-value=3e-09 Score=109.06 Aligned_cols=130 Identities=19% Similarity=0.165 Sum_probs=83.6
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC-CCCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP-IIGEGDK 314 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~-~~g~g~~ 314 (494)
=|..-+|.|....... ++||+||+|||++..++... ..+ .....++.++++||.++||- ..|+-..
T Consensus 108 CL~LnI~~P~~~~~~~--~lPV~v~ihGG~f~~G~~~~------~~~-----~~~~~~~~~~vivVt~nYRlg~~Gfl~~ 174 (535)
T PF00135_consen 108 CLYLNIYTPSNASSNS--KLPVMVWIHGGGFMFGSGSF------PPY-----DGASLAASKDVIVVTINYRLGAFGFLSL 174 (535)
T ss_dssp --EEEEEEETSSSSTT--SEEEEEEE--STTTSSCTTS------GGG-----HTHHHHHHHTSEEEEE----HHHHH-BS
T ss_pred HHHHhhhhcccccccc--ccceEEEeecccccCCCccc------ccc-----cccccccCCCEEEEEecccccccccccc
Confidence 3788899998865442 49999999999876544310 011 22335678999999988872 2232111
Q ss_pred CCCch-hHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCC
Q 011049 315 LPNDR-FVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGS 378 (494)
Q Consensus 315 ~~~~~-~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~ 378 (494)
..... ..+....|...|++|+.++ ..-||++|-|+|+|.||..+..++... ..+|+.+|+.+|.
T Consensus 175 ~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 175 GDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp SSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred cccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 11111 1355688999999999886 235999999999999999998777652 2589999999984
No 150
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.74 E-value=4.1e-08 Score=85.02 Aligned_cols=182 Identities=16% Similarity=0.178 Sum_probs=111.1
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL 315 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~ 315 (494)
..+..++.|.. ++.+|+|+++||..- +..++....+.+++.||+|+++......+-
T Consensus 32 PkpLlI~tP~~-----~G~yPVilF~HG~~l---------------~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p---- 87 (307)
T PF07224_consen 32 PKPLLIVTPSE-----AGTYPVILFLHGFNL---------------YNSFYSQLLAHIASHGFIVVAPQLYTLFPP---- 87 (307)
T ss_pred CCCeEEecCCc-----CCCccEEEEeechhh---------------hhHHHHHHHHHHhhcCeEEEechhhcccCC----
Confidence 45677888875 566999999999421 122223345577899999999665433221
Q ss_pred CCchhHHHHHHHHHHHHHHHHHc--C------CCCCCcEEEEecChHHHHHHHHHHhCC--CceeEEEeCCCCCCCCCCC
Q 011049 316 PNDRFVEQLVSSAEAAVEEVVRR--G------VADPSRIAVGGHSYGAFMTAHLLAHAP--HLFCCGIARSGSYNKTLTP 385 (494)
Q Consensus 316 ~~~~~~~~~~~d~~~~v~~l~~~--~------~~d~~ri~i~G~S~GG~~a~~~~~~~p--~~~~a~v~~~~~~~~~~~~ 385 (494)
...+.+++..+.++||.+. . ..+-++++++|||.||-.|..+|..+. -.|.+.|.+.|+.-.....
T Consensus 88 ----~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~ 163 (307)
T PF07224_consen 88 ----DGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGK 163 (307)
T ss_pred ----CchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCC
Confidence 1234567778888888753 1 135679999999999999999998763 2588888888874321100
Q ss_pred CCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCC-----CCCCCCHH--HHHHHHHHHHhCCCcEEEEEcCCC
Q 011049 386 FGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVD-----DKVGLFPM--QAERFFDALKGHGALSRLVLLPFE 458 (494)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D-----~~v~~~~~--~~~~~~~~l~~~g~~~~~~~~~~~ 458 (494)
++ .+.. ..+.|.. -++..|+++|-...- -..||.+. +-++++...+ .++-..+-.+-
T Consensus 164 -------~t---~P~i-Lty~p~S--F~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk---~p~~hfV~~dY 227 (307)
T PF07224_consen 164 -------QT---PPPI-LTYVPQS--FDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECK---PPCAHFVAKDY 227 (307)
T ss_pred -------CC---CCCe-eecCCcc--cccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhc---ccceeeeeccc
Confidence 00 0000 0011111 134589998875443 11233233 3467887776 34566666777
Q ss_pred CCc
Q 011049 459 HHV 461 (494)
Q Consensus 459 ~H~ 461 (494)
||.
T Consensus 228 GHm 230 (307)
T PF07224_consen 228 GHM 230 (307)
T ss_pred ccc
Confidence 884
No 151
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.71 E-value=3.2e-07 Score=77.97 Aligned_cols=225 Identities=16% Similarity=0.110 Sum_probs=126.2
Q ss_pred EEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCC
Q 011049 227 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI 306 (494)
Q Consensus 227 ~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 306 (494)
..++..||..+.+..|.-.+. .+-.+.+-|+. +- ...+...++...+.+||.|+..++|
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~-------~~g~~~va~a~-----------Gv---~~~fYRrfA~~a~~~Gf~Vlt~dyR 66 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGK-------ASGRLVVAGAT-----------GV---GQYFYRRFAAAAAKAGFEVLTFDYR 66 (281)
T ss_pred cccccCCCccCccccccCCCC-------CCCcEEecccC-----------Cc---chhHhHHHHHHhhccCceEEEEecc
Confidence 557788999999998854431 23222222221 11 1122334566677899999997777
Q ss_pred CCCCCCCCC---CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC--CCC
Q 011049 307 PIIGEGDKL---PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS--YNK 381 (494)
Q Consensus 307 ~~~g~g~~~---~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~--~~~ 381 (494)
|..+..... ..-.+.+-...|+.++++++.+.. -.-.+..+|||+||.+.. ++.+++..-.++|..++. .-+
T Consensus 67 G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~g-L~~~~~k~~a~~vfG~gagwsg~ 143 (281)
T COG4757 67 GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALG-LLGQHPKYAAFAVFGSGAGWSGW 143 (281)
T ss_pred cccCCCccccccCccchhhhhhcchHHHHHHHHhhC--CCCceEEeeccccceeec-ccccCcccceeeEeccccccccc
Confidence 653322111 113344555789999999998743 235689999999998775 444554222222222211 110
Q ss_pred C---------------CC---------CCC---ccccc-ccccccHHHH------HhcCccc-----cccCCCCCEEEEe
Q 011049 382 T---------------LT---------PFG---FQTEF-RTLWEATNVY------IEMSPIT-----HANKIKKPILIIH 422 (494)
Q Consensus 382 ~---------------~~---------~~~---~~~~~-~~~~~~~~~~------~~~sp~~-----~~~~~~~P~li~~ 422 (494)
. .. ++. +.... .+...+...| ...+|.. ..+++.+|++++.
T Consensus 144 m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~ 223 (281)
T COG4757 144 MGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSR 223 (281)
T ss_pred hhhhhcccceeeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeec
Confidence 0 00 000 00000 0000111111 1122322 2456789999999
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCC----CCccCCcccHHHHHHHHHHHH
Q 011049 423 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE----HHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 423 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~----~H~~~~~~~~~~~~~~~~~fl 479 (494)
..+|+.+| +...+.+.+..+++ +.++..++.. ||.-...+..+....++++||
T Consensus 224 ~~DD~w~P--~As~d~f~~~y~nA--pl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 224 ALDDPWAP--PASRDAFASFYRNA--PLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cCCCCcCC--HHHHHHHHHhhhcC--cccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 99999987 77777887777754 4567766654 786333344467778888886
No 152
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.69 E-value=8.2e-07 Score=87.43 Aligned_cols=87 Identities=13% Similarity=-0.010 Sum_probs=61.6
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHH----HHH
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH----LLA 363 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~----~~~ 363 (494)
.....|+++||.|+.++-+. -+.+...- ..++.++.+.++|+.+.+.. ..++|-++|+|+||.+++. +++
T Consensus 238 SlVr~lv~qG~~VflIsW~n---P~~~~r~~-~ldDYv~~i~~Ald~V~~~t--G~~~vnl~GyC~GGtl~a~~~a~~aA 311 (560)
T TIGR01839 238 SFVQYCLKNQLQVFIISWRN---PDKAHREW-GLSTYVDALKEAVDAVRAIT--GSRDLNLLGACAGGLTCAALVGHLQA 311 (560)
T ss_pred hHHHHHHHcCCeEEEEeCCC---CChhhcCC-CHHHHHHHHHHHHHHHHHhc--CCCCeeEEEECcchHHHHHHHHHHHh
Confidence 35668899999999855321 12222121 12444567888888887763 3578999999999999986 677
Q ss_pred hCCC-ceeEEEeCCCCCC
Q 011049 364 HAPH-LFCCGIARSGSYN 380 (494)
Q Consensus 364 ~~p~-~~~a~v~~~~~~~ 380 (494)
.+++ +++.++.+....|
T Consensus 312 ~~~~~~V~sltllatplD 329 (560)
T TIGR01839 312 LGQLRKVNSLTYLVSLLD 329 (560)
T ss_pred cCCCCceeeEEeeecccc
Confidence 7775 7999888777665
No 153
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.64 E-value=1.9e-07 Score=82.71 Aligned_cols=102 Identities=25% Similarity=0.208 Sum_probs=60.7
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC--------CCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHH
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA--------PHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYI 403 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~--------p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (494)
.+++.+++- -.+|+|+|.||.+|..++... ...||.+|.++|.......
T Consensus 94 ~~~i~~~GP----fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------------- 150 (212)
T PF03959_consen 94 RDYIEENGP----FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------------- 150 (212)
T ss_dssp HHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE--------------------
T ss_pred HHHHHhcCC----eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh-------------------
Confidence 344445553 359999999999999888642 1357999999886321000
Q ss_pred hcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC
Q 011049 404 EMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 404 ~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 463 (494)
........++++|+|.++|++|..++ ...++.+++..... .+++..++ ||.+-
T Consensus 151 -~~~~~~~~~i~iPtlHv~G~~D~~~~--~~~s~~L~~~~~~~---~~v~~h~g-GH~vP 203 (212)
T PF03959_consen 151 -YQELYDEPKISIPTLHVIGENDPVVP--PERSEALAEMFDPD---ARVIEHDG-GHHVP 203 (212)
T ss_dssp -GTTTT--TT---EEEEEEETT-SSS---HHHHHHHHHHHHHH---EEEEEESS-SSS--
T ss_pred -hhhhhccccCCCCeEEEEeCCCCCcc--hHHHHHHHHhccCC---cEEEEECC-CCcCc
Confidence 01111335678999999999999997 88999999999875 56777766 78764
No 154
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.64 E-value=6.9e-06 Score=72.83 Aligned_cols=128 Identities=16% Similarity=0.179 Sum_probs=79.6
Q ss_pred EEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCC
Q 011049 225 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 304 (494)
Q Consensus 225 ~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 304 (494)
..+.+.+.+|..+...-.+-..-.. ..+..+||-+||.| |+...|. +....|.+.|+.++..|
T Consensus 7 ~~~k~~~~~~~~~~~~a~y~D~~~~--gs~~gTVv~~hGsP-----------GSH~DFk----Yi~~~l~~~~iR~I~iN 69 (297)
T PF06342_consen 7 KLVKFQAENGKIVTVQAVYEDSLPS--GSPLGTVVAFHGSP-----------GSHNDFK----YIRPPLDEAGIRFIGIN 69 (297)
T ss_pred EEEEcccccCceEEEEEEEEecCCC--CCCceeEEEecCCC-----------CCccchh----hhhhHHHHcCeEEEEeC
Confidence 4456666677655444333222111 23467999999987 4434453 34568889999999977
Q ss_pred CCCCCCCCCCC--CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 305 SIPIIGEGDKL--PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 305 ~~~~~g~g~~~--~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
+. |+|... ....+.+. +-...++.|.++-.++ +++.++|||.|+-.|+.++..+| ..++++++|+
T Consensus 70 ~P---Gf~~t~~~~~~~~~n~---er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~ 136 (297)
T PF06342_consen 70 YP---GFGFTPGYPDQQYTNE---ERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPP 136 (297)
T ss_pred CC---CCCCCCCCcccccChH---HHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCc--cceEEEecCC
Confidence 63 333332 22222221 2234445555554455 78999999999999999999985 3577777765
No 155
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.62 E-value=2.8e-07 Score=86.65 Aligned_cols=79 Identities=23% Similarity=0.432 Sum_probs=64.6
Q ss_pred HHHhcCccccccCCC-CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccH--HHHHHHHHH
Q 011049 401 VYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENV--MHVIWETDR 477 (494)
Q Consensus 401 ~~~~~sp~~~~~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~--~~~~~~~~~ 477 (494)
.+...++...+.++. +|+|++||.+|..|| ..++..++++.+.. +.+..++++.+|........ ...+.++.+
T Consensus 217 ~~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp--~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~ 292 (299)
T COG1073 217 LLLLLDPFDDAEKISPRPVLLVHGERDEVVP--LRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNPPAVEQALDKLAE 292 (299)
T ss_pred hhccCcchhhHhhcCCcceEEEecCCCcccc--hhhhHHHHhhhccC--CceEEEecCCccccccCccHHHHHHHHHHHH
Confidence 356667777788887 799999999999998 99999999998875 56888899999987643333 478889999
Q ss_pred HHHHhc
Q 011049 478 WLQKYC 483 (494)
Q Consensus 478 fl~~~l 483 (494)
||.+++
T Consensus 293 f~~~~l 298 (299)
T COG1073 293 FLERHL 298 (299)
T ss_pred HHHHhc
Confidence 999886
No 156
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.62 E-value=7.1e-07 Score=77.35 Aligned_cols=148 Identities=16% Similarity=0.159 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHcCC--CCCCcEEEEecChHHHHHHHHHHhCCC---ceeEEE---eCCCCCCCCCCCCCcc-------
Q 011049 325 VSSAEAAVEEVVRRGV--ADPSRIAVGGHSYGAFMTAHLLAHAPH---LFCCGI---ARSGSYNKTLTPFGFQ------- 389 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~--~d~~ri~i~G~S~GG~~a~~~~~~~p~---~~~a~v---~~~~~~~~~~~~~~~~------- 389 (494)
..|+.+.++.+...-. .-....+++||||||.+|.-+|.+.-. ...+.. ..+|..+.........
T Consensus 53 ~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~ 132 (244)
T COG3208 53 LTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLAD 132 (244)
T ss_pred cccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHH
Confidence 3344444444444321 122579999999999999998875411 122222 2223221110000000
Q ss_pred --cccc---cccccHHHHHhcCccc-----------c--ccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEE
Q 011049 390 --TEFR---TLWEATNVYIEMSPIT-----------H--ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSR 451 (494)
Q Consensus 390 --~~~~---~~~~~~~~~~~~sp~~-----------~--~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~ 451 (494)
...+ ..+++++.+.-.-|+. + -..+.+|+.++.|++|..|. .++...+.+.. +...+
T Consensus 133 l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs--~~~~~~W~~~t---~~~f~ 207 (244)
T COG3208 133 LVDLGGTPPELLEDPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVS--RDELGAWREHT---KGDFT 207 (244)
T ss_pred HHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhcc--HHHHHHHHHhh---cCCce
Confidence 0011 1244554433322221 1 13577999999999999985 44444444433 34689
Q ss_pred EEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 452 LVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 452 ~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
+.+|+| +|.+.. .+...+...+.+.+
T Consensus 208 l~~fdG-gHFfl~-~~~~~v~~~i~~~l 233 (244)
T COG3208 208 LRVFDG-GHFFLN-QQREEVLARLEQHL 233 (244)
T ss_pred EEEecC-cceehh-hhHHHHHHHHHHHh
Confidence 999988 898763 44444444444444
No 157
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.61 E-value=2.7e-07 Score=85.08 Aligned_cols=109 Identities=10% Similarity=-0.062 Sum_probs=72.5
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH-hCCeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAA 331 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~~ 331 (494)
.|++|++||... +.. ..+.......++ ..+|.|+++|..+. +..... ........+++...
T Consensus 36 ~p~vilIHG~~~-----------~~~--~~~~~~l~~~ll~~~~~nVi~vD~~~~---~~~~y~~a~~~~~~v~~~la~~ 99 (275)
T cd00707 36 RPTRFIIHGWTS-----------SGE--ESWISDLRKAYLSRGDYNVIVVDWGRG---ANPNYPQAVNNTRVVGAELAKF 99 (275)
T ss_pred CCcEEEEcCCCC-----------CCC--CcHHHHHHHHHHhcCCCEEEEEECccc---cccChHHHHHhHHHHHHHHHHH
Confidence 589999999531 110 011112222334 46899999776432 111110 11122335677888
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 332 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 332 v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
+++|.++..++.++|.++|||+||+++..++.+.|++++.++++.|..
T Consensus 100 l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 100 LDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred HHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 888888755677899999999999999999999999999999988764
No 158
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.59 E-value=6.5e-07 Score=90.68 Aligned_cols=82 Identities=12% Similarity=-0.007 Sum_probs=60.7
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeee--------eccceEEEEEcCCCCCCCceEeeecc
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY--------KTSQTRTWLVCPGSKDVAPRVLFDRV 87 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~--------~~~~~~~~~~~~~~g~~~~~~lt~~~ 87 (494)
++.+||+.+. ++..+++|.++. ...|+|||||++|+|.++. .....++|+++++++ +.++ ...
T Consensus 377 ~~s~Lwv~~~----gg~~~~lt~g~~-~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~g--e~~~--~~~ 447 (591)
T PRK13616 377 PASSLWVGPL----GGVAVQVLEGHS-LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDAS--AVAS--RVP 447 (591)
T ss_pred cceEEEEEeC----CCcceeeecCCC-CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCc--hhhh--ccC
Confidence 6779999987 456688888864 8899999999999998642 112468999999887 6655 222
Q ss_pred cccccCCCCCCceeeCCCCCEEEEEE
Q 011049 88 FENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 88 ~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
+.. ..+. |||||++|+|..
T Consensus 448 g~I-----ssl~--wSpDG~RiA~i~ 466 (591)
T PRK13616 448 GPI-----SELQ--LSRDGVRAAMII 466 (591)
T ss_pred CCc-----CeEE--ECCCCCEEEEEE
Confidence 211 3334 999999999987
No 159
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.57 E-value=2.2e-06 Score=78.95 Aligned_cols=65 Identities=22% Similarity=0.099 Sum_probs=47.9
Q ss_pred ccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 411 ANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 411 ~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+++++.|+|++.-+.|.+.| +.+.+++.+.|+..+. -..+-...||.-+..+ ...+...+..||.
T Consensus 302 l~~i~~~~lv~gi~sD~lfp--~~~~~~~~~~L~~~~~--~~~i~S~~GHDaFL~e-~~~~~~~i~~fL~ 366 (368)
T COG2021 302 LARIKAPVLVVGITSDWLFP--PELQRALAEALPAAGA--LREIDSPYGHDAFLVE-SEAVGPLIRKFLA 366 (368)
T ss_pred HhcCccCEEEEEecccccCC--HHHHHHHHHhccccCc--eEEecCCCCchhhhcc-hhhhhHHHHHHhh
Confidence 67799999999999999998 9999999999998775 2233446789744322 2234456666664
No 160
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.52 E-value=2.3e-06 Score=71.78 Aligned_cols=172 Identities=16% Similarity=0.125 Sum_probs=105.6
Q ss_pred cCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHH
Q 011049 282 FSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361 (494)
Q Consensus 282 ~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~ 361 (494)
|..+....+..|+++|+.|+-.|..-+ +......++...|+.+.+++..++.. .+++.++|.|+|+-+...+
T Consensus 14 w~~~d~~~a~~l~~~G~~VvGvdsl~Y------fw~~rtP~~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGADvlP~~ 85 (192)
T PF06057_consen 14 WRDLDKQIAEALAKQGVPVVGVDSLRY------FWSERTPEQTAADLARIIRHYRARWG--RKRVVLIGYSFGADVLPFI 85 (192)
T ss_pred chhhhHHHHHHHHHCCCeEEEechHHH------HhhhCCHHHHHHHHHHHHHHHHHHhC--CceEEEEeecCCchhHHHH
Confidence 554455667789999999998554322 12233456778999999988877743 4899999999999888888
Q ss_pred HHhCCC----ceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCC-CCEEEEecCCCCCCCCCHHHH
Q 011049 362 LAHAPH----LFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIK-KPILIIHGEVDDKVGLFPMQA 436 (494)
Q Consensus 362 ~~~~p~----~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~-~P~li~~G~~D~~v~~~~~~~ 436 (494)
..+-|. +++.+++++|-.... |+......+.....-....+...+.++. .|++.++|++|.-..||
T Consensus 86 ~nrLp~~~r~~v~~v~Ll~p~~~~d-----Feihv~~wlg~~~~~~~~~~~pei~~l~~~~v~CiyG~~E~d~~cp---- 156 (192)
T PF06057_consen 86 YNRLPAALRARVAQVVLLSPSTTAD-----FEIHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCIYGEDEDDSLCP---- 156 (192)
T ss_pred HhhCCHHHHhheeEEEEeccCCcce-----EEEEhhhhcCCCCCcccCCchHHHHhCCCCeEEEEEcCCCCCCcCc----
Confidence 877774 667777776642211 1100000000000001123445566665 69999999987654332
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 437 ERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 437 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.|+. ..++.+..|| ||.|. .+.....+.|++-++
T Consensus 157 -----~l~~--~~~~~i~lpG-gHHfd--~dy~~La~~Il~~l~ 190 (192)
T PF06057_consen 157 -----SLRQ--PGVEVIALPG-GHHFD--GDYDALAKRILDALK 190 (192)
T ss_pred -----cccC--CCcEEEEcCC-CcCCC--CCHHHHHHHHHHHHh
Confidence 2333 3468889999 56565 344455555555443
No 161
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.48 E-value=1.5e-06 Score=84.10 Aligned_cols=109 Identities=9% Similarity=-0.031 Sum_probs=72.3
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh--CCeEEEeCCCCCCCCCCCCCCC--chhHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEA 330 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~d~~~ 330 (494)
.|++|++||.... + .+..+.......|.. ..|.|+++|-+ |+|.+... .........++.+
T Consensus 41 ~ptvIlIHG~~~s---------~---~~~~w~~~l~~al~~~~~d~nVI~VDw~---g~g~s~y~~a~~~t~~vg~~la~ 105 (442)
T TIGR03230 41 TKTFIVIHGWTVT---------G---MFESWVPKLVAALYEREPSANVIVVDWL---SRAQQHYPTSAAYTKLVGKDVAK 105 (442)
T ss_pred CCeEEEECCCCcC---------C---cchhhHHHHHHHHHhccCCCEEEEEECC---CcCCCCCccccccHHHHHHHHHH
Confidence 5899999995310 0 011111112223332 36999996654 34433221 2223445567788
Q ss_pred HHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 331 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 331 ~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
.+++|.+...++.+++.++|||+||.++..++.+.|+++..++.+.|.
T Consensus 106 lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 106 FVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred HHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 888887654467789999999999999999999999999999998875
No 162
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.48 E-value=1.2e-06 Score=76.70 Aligned_cols=115 Identities=23% Similarity=0.285 Sum_probs=75.0
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh-CCeEEE
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVL 301 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~ 301 (494)
+.+.+.++..++ ++..++..|.. ..-|++++.||+|.+..+ |. .++..+.+ .-..++
T Consensus 49 ekedv~i~~~~~-t~n~Y~t~~~~------t~gpil~l~HG~G~S~LS-----------fA----~~a~el~s~~~~r~~ 106 (343)
T KOG2564|consen 49 EKEDVSIDGSDL-TFNVYLTLPSA------TEGPILLLLHGGGSSALS-----------FA----IFASELKSKIRCRCL 106 (343)
T ss_pred cccccccCCCcc-eEEEEEecCCC------CCccEEEEeecCcccchh-----------HH----HHHHHHHhhcceeEE
Confidence 355666665555 78888888862 126999999998754311 22 23334443 334456
Q ss_pred eCCCCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 302 AGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 302 ~~~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
+ .+.+|+|++... .-..+.+..|+.+.++++... ++..|.++||||||.++.+.+...
T Consensus 107 a---~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~k 167 (343)
T KOG2564|consen 107 A---LDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAASK 167 (343)
T ss_pred E---eeccccCccccCChhhcCHHHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhhh
Confidence 6 456677776332 222456788988888887643 346799999999999998887654
No 163
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.47 E-value=1.5e-06 Score=73.61 Aligned_cols=100 Identities=17% Similarity=0.189 Sum_probs=67.4
Q ss_pred CcEEEEecChHHHHHHHHH-HhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEe
Q 011049 344 SRIAVGGHSYGAFMTAHLL-AHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIH 422 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~-~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~ 422 (494)
+.+.++|||.|..+++.++ .+...+++++++++|...... ..... ......+.. ...+..|.+++.
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~--~~~~~----------~~~~f~~~p-~~~l~~~~~via 121 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDP--EPFPP----------ELDGFTPLP-RDPLPFPSIVIA 121 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCH--HCCTC----------GGCCCTTSH-CCHHHCCEEEEE
T ss_pred CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccc--cchhh----------hccccccCc-ccccCCCeEEEE
Confidence 4699999999999999999 777789999999999633100 00000 000011110 112346779999
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC
Q 011049 423 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 423 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 463 (494)
+++|+.|| +..+.++++.|. .++++++++||...
T Consensus 122 S~nDp~vp--~~~a~~~A~~l~-----a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 122 SDNDPYVP--FERAQRLAQRLG-----AELIILGGGGHFNA 155 (171)
T ss_dssp ETTBSSS---HHHHHHHHHHHT------EEEEETS-TTSSG
T ss_pred cCCCCccC--HHHHHHHHHHcC-----CCeEECCCCCCccc
Confidence 99999998 999999999995 48999999999643
No 164
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.46 E-value=1.1e-06 Score=84.68 Aligned_cols=138 Identities=8% Similarity=0.027 Sum_probs=99.2
Q ss_pred cceeeeccCCCCCCCCCeecccc---cc--ccccceec-CCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKL---DL--RFRSVSWC-DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~---~~--~~~~p~ws-pDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
+-.|+++|. ..+..+.+... .. ....+.|. +||..+++.+.+++ ..+||+++.+++ ..++||......
T Consensus 209 ~~~l~~~d~---~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G-~~hly~~~~~~~--~~~~lT~G~~~V 282 (353)
T PF00930_consen 209 RLDLVLCDA---STGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDG-YRHLYLYDLDGG--KPRQLTSGDWEV 282 (353)
T ss_dssp EEEEEEEEE---CTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTS-SEEEEEEETTSS--EEEESS-SSS-E
T ss_pred EEEEEEEEC---CCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCC-CcEEEEEccccc--ceeccccCceee
Confidence 337777777 65665544321 11 12244555 99999999998777 899999999998 788999876553
Q ss_pred ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecC-CCceEEEEeeCcchhhhheeeecc
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN-TGSKERIWESNREKYFETAVALVF 169 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~-~g~~~~l~~~~~~~~~~~~~~~~s 169 (494)
.+ ++.|+++++.|+|.+... .....|||+++++ +++.++|+...+..
T Consensus 283 -----~~-i~~~d~~~~~iyf~a~~~----------------~p~~r~lY~v~~~~~~~~~~LT~~~~~~---------- 330 (353)
T PF00930_consen 283 -----TS-ILGWDEDNNRIYFTANGD----------------NPGERHLYRVSLDSGGEPKCLTCEDGDH---------- 330 (353)
T ss_dssp -----EE-EEEEECTSSEEEEEESSG----------------GTTSBEEEEEETTETTEEEESSTTSSTT----------
T ss_pred -----cc-cceEcCCCCEEEEEecCC----------------CCCceEEEEEEeCCCCCeEeccCCCCCc----------
Confidence 12 445899999999998431 2335589999999 99999998876541
Q ss_pred CCCcccccccCcEEEEEEecCCCCC
Q 011049 170 GQGEEDINLNQLKILTSKESKTEIT 194 (494)
Q Consensus 170 ~~~~~~~s~d~~~~~~~~~s~~~p~ 194 (494)
..+.||||++.++.+++++..|+
T Consensus 331 --~~~~~Spdg~y~v~~~s~~~~P~ 353 (353)
T PF00930_consen 331 --YSASFSPDGKYYVDTYSGPDTPP 353 (353)
T ss_dssp --EEEEE-TTSSEEEEEEESSSSCE
T ss_pred --eEEEECCCCCEEEEEEcCCCCCC
Confidence 14589999999999999998885
No 165
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=98.46 E-value=2.1e-07 Score=57.44 Aligned_cols=36 Identities=11% Similarity=0.039 Sum_probs=29.7
Q ss_pred eeccccccccccceecCCCceEEEEeeee--ccceEEEE
Q 011049 34 EILHKLDLRFRSVSWCDDSLALVNETWYK--TSQTRTWL 70 (494)
Q Consensus 34 ~~lt~~~~~~~~p~wspDg~~i~f~~~~~--~~~~~~~~ 70 (494)
+++|.....+..|+|||||++|+|++.+. + ..+||+
T Consensus 2 ~~~t~~~~~~~~p~~SpDGk~i~f~s~~~~~g-~~diy~ 39 (39)
T PF07676_consen 2 KQLTNSPGDDGSPAWSPDGKYIYFTSNRNDRG-SFDIYV 39 (39)
T ss_dssp EEES-SSSSEEEEEE-TTSSEEEEEEECT--S-SEEEEE
T ss_pred cCcccCCccccCEEEecCCCEEEEEecCCCCC-CcCEEC
Confidence 57888888899999999999999999877 5 677885
No 166
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.45 E-value=2.7e-06 Score=72.32 Aligned_cols=124 Identities=20% Similarity=0.214 Sum_probs=88.5
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC--------CceeEEEeCCCCCCCCCCCCCcccccccccccH
Q 011049 328 AEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP--------HLFCCGIARSGSYNKTLTPFGFQTEFRTLWEAT 399 (494)
Q Consensus 328 ~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p--------~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (494)
+....+|+.++|-.| ||+|+|.|+.++..+++... -.|+-+|.++|..-...
T Consensus 92 l~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~---------------- 151 (230)
T KOG2551|consen 92 LEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSK---------------- 151 (230)
T ss_pred HHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcc----------------
Confidence 455668888898777 79999999999999988221 14688888888532210
Q ss_pred HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 400 NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 400 ~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
...-..+...+++|.|-+.|+.|.+|| ...+..|++...+. ..+.-|+ ||.+- +...+.+.+.+||
T Consensus 152 ----~~~~~~~~~~i~~PSLHi~G~~D~iv~--~~~s~~L~~~~~~a----~vl~Hpg-gH~VP---~~~~~~~~i~~fi 217 (230)
T KOG2551|consen 152 ----KLDESAYKRPLSTPSLHIFGETDTIVP--SERSEQLAESFKDA----TVLEHPG-GHIVP---NKAKYKEKIADFI 217 (230)
T ss_pred ----hhhhhhhccCCCCCeeEEecccceeec--chHHHHHHHhcCCC----eEEecCC-CccCC---CchHHHHHHHHHH
Confidence 001112344678999999999999998 88899999988765 4444444 89764 3337778888998
Q ss_pred HHhcCC
Q 011049 480 QKYCLS 485 (494)
Q Consensus 480 ~~~l~~ 485 (494)
+..+..
T Consensus 218 ~~~~~~ 223 (230)
T KOG2551|consen 218 QSFLQE 223 (230)
T ss_pred HHHHHh
Confidence 877653
No 167
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.41 E-value=6.1e-07 Score=72.25 Aligned_cols=119 Identities=22% Similarity=0.276 Sum_probs=84.0
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCcc
Q 011049 329 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPI 408 (494)
Q Consensus 329 ~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 408 (494)
.+.-.|++++.. |.+..+.|.|+||+.++.+..++|++|..+|+.+|+++....--.+ +++...| .||.
T Consensus 88 ~AyerYv~eEal--pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~y-------yddDv~y--nsP~ 156 (227)
T COG4947 88 RAYERYVIEEAL--PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGY-------YDDDVYY--NSPS 156 (227)
T ss_pred HHHHHHHHHhhc--CCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhcccc-------ccCceee--cChh
Confidence 344467877754 4678899999999999999999999999999999998743211111 1111111 4555
Q ss_pred ccccCCC----------CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCcc
Q 011049 409 THANKIK----------KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY 462 (494)
Q Consensus 409 ~~~~~~~----------~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 462 (494)
.++..+. ..+.+..|..|+.. .+.+++-+.|.++.++..+.+..+..|.+
T Consensus 157 dylpg~~dp~~l~rlr~~~~vfc~G~e~~~L----~~~~~L~~~l~dKqipaw~~~WggvaHdw 216 (227)
T COG4947 157 DYLPGLADPFRLERLRRIDMVFCIGDEDPFL----DNNQHLSRLLSDKQIPAWMHVWGGVAHDW 216 (227)
T ss_pred hhccCCcChHHHHHHhhccEEEEecCccccc----cchHHHHHHhccccccHHHHHhccccccc
Confidence 5544433 44667788888764 45678999999988888887777766654
No 168
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.38 E-value=1.2e-05 Score=73.58 Aligned_cols=72 Identities=18% Similarity=0.237 Sum_probs=46.2
Q ss_pred eEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC
Q 011049 298 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377 (494)
Q Consensus 298 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 377 (494)
|.++.++.+ |+|.+............++...++ ..+ . .++.++|||+||.++..++.++|++++.+|..++
T Consensus 51 ~~~~~~d~~---g~g~s~~~~~~~~~~~~~~~~~~~---~~~-~--~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~ 121 (282)
T COG0596 51 YRVIAPDLR---GHGRSDPAGYSLSAYADDLAALLD---ALG-L--EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGP 121 (282)
T ss_pred eEEEEeccc---CCCCCCcccccHHHHHHHHHHHHH---HhC-C--CceEEEEecccHHHHHHHHHhcchhhheeeEecC
Confidence 888885554 555553000011111333333332 223 2 3499999999999999999999999999988875
Q ss_pred C
Q 011049 378 S 378 (494)
Q Consensus 378 ~ 378 (494)
.
T Consensus 122 ~ 122 (282)
T COG0596 122 A 122 (282)
T ss_pred C
Confidence 4
No 169
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.37 E-value=8.7e-07 Score=79.60 Aligned_cols=180 Identities=13% Similarity=0.110 Sum_probs=104.3
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeC
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 303 (494)
-++..+++.||.+|...++.-..-+.+.. .-+||..-|.. .|...+-.. .-++.||.|+-.
T Consensus 214 G~R~kiks~dgneiDtmF~d~r~n~~~ng--q~LvIC~EGNA---------------GFYEvG~m~--tP~~lgYsvLGw 274 (517)
T KOG1553|consen 214 GQRLKIKSSDGNEIDTMFLDGRPNQSGNG--QDLVICFEGNA---------------GFYEVGVMN--TPAQLGYSVLGW 274 (517)
T ss_pred CeEEEEeecCCcchhheeecCCCCCCCCC--ceEEEEecCCc---------------cceEeeeec--ChHHhCceeecc
Confidence 45678899999999887775432112111 35677666521 122222111 227899999985
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC
Q 011049 304 PSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 383 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~ 383 (494)
+.. |++++..- .+..+....+.+++++.+..-...++.|.++|||-||+.++++|..+|+. +++|+-+.+-|...
T Consensus 275 NhP---GFagSTG~-P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdV-kavvLDAtFDDllp 349 (517)
T KOG1553|consen 275 NHP---GFAGSTGL-PYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDV-KAVVLDATFDDLLP 349 (517)
T ss_pred CCC---CccccCCC-CCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCc-eEEEeecchhhhhh
Confidence 543 44333211 12223344455778888876556778999999999999999999999984 88888766433211
Q ss_pred CCCCcccccccccc-----cHHHHHhcCccccccCCCCCEEEEecCCCCCCC
Q 011049 384 TPFGFQTEFRTLWE-----ATNVYIEMSPITHANKIKKPILIIHGEVDDKVG 430 (494)
Q Consensus 384 ~~~~~~~~~~~~~~-----~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~ 430 (494)
.... ...+.|. ....+....-...+.+.+.|+.+|--.+|.++.
T Consensus 350 --LAl~-rMP~~~~giV~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIit 398 (517)
T KOG1553|consen 350 --LALF-RMPTFFSGIVEHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIIT 398 (517)
T ss_pred --HHhh-hchHHHHHHHHHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhh
Confidence 0000 0011111 111222223333455567888888877777653
No 170
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.35 E-value=1.9e-05 Score=74.29 Aligned_cols=163 Identities=20% Similarity=0.138 Sum_probs=104.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCC--CCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC-CC--------
Q 011049 319 RFVEQLVSSAEAAVEEVVRRGVAD--PSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP-FG-------- 387 (494)
Q Consensus 319 ~~~~~~~~d~~~~v~~l~~~~~~d--~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~-~~-------- 387 (494)
+++-..+.|+..|+.++.+.-.-- .-++.++|+|+|||++..++--.|..|.+++-.++.....+.. .+
T Consensus 157 N~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y 236 (403)
T PF11144_consen 157 NFGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKY 236 (403)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccc
Confidence 344455789999999998863222 3489999999999999999999999999999887764421100 00
Q ss_pred -----c--------ccccccccccH---------HHHHhcCcc--cc---ccCC--CCCEEEEecCCCCCCCCCHHHHHH
Q 011049 388 -----F--------QTEFRTLWEAT---------NVYIEMSPI--TH---ANKI--KKPILIIHGEVDDKVGLFPMQAER 438 (494)
Q Consensus 388 -----~--------~~~~~~~~~~~---------~~~~~~sp~--~~---~~~~--~~P~li~~G~~D~~v~~~~~~~~~ 438 (494)
+ .....+.|... +.+.-.+.+ .| -++. ++-....|+..|..+| ..+-.+
T Consensus 237 ~~~~~~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p--~~~K~~ 314 (403)
T PF11144_consen 237 ICSGEFFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAP--AEDKEE 314 (403)
T ss_pred cccccccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCC--HHHHHH
Confidence 0 00113445321 111111111 11 1122 2446678999999998 999999
Q ss_pred HHHHHHhCCCcEEEEEcC-----------CCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 439 FFDALKGHGALSRLVLLP-----------FEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 439 ~~~~l~~~g~~~~~~~~~-----------~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
+++.|++.|-+++++.+. +-.|++... ....++..+.-+.+.+.+
T Consensus 315 l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis--~k~Lf~KeLp~~lek~~~ 370 (403)
T PF11144_consen 315 LYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGIS--DKALFKKELPLMLEKLQG 370 (403)
T ss_pred HHHHHHHcCCCeEEEEecChhhccchheeccccCCCCC--HHHHHHHHhHHHHHHhhc
Confidence 999999999999999884 347776532 234444444444455544
No 171
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.29 E-value=8.7e-06 Score=76.09 Aligned_cols=131 Identities=8% Similarity=0.071 Sum_probs=91.4
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP 98 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~ 98 (494)
.|=+.+. +|++.+++-..-+......-|||||.++..- ..-+||++++++| .++.+-..... .- ...
T Consensus 383 ~l~iyd~---~~~e~kr~e~~lg~I~av~vs~dGK~~vvaN----dr~el~vididng--nv~~idkS~~~-lI---tdf 449 (668)
T COG4946 383 KLGIYDK---DGGEVKRIEKDLGNIEAVKVSPDGKKVVVAN----DRFELWVIDIDNG--NVRLIDKSEYG-LI---TDF 449 (668)
T ss_pred eEEEEec---CCceEEEeeCCccceEEEEEcCCCcEEEEEc----CceEEEEEEecCC--CeeEecccccc-ee---EEE
Confidence 5667777 7888888877767777889999999888652 2579999999998 66655332211 10 222
Q ss_pred ceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccc
Q 011049 99 MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINL 178 (494)
Q Consensus 99 ~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~ 178 (494)
. |+|++++|||.-. +|+ -..+|.++|+++++.-.++.+.+. +-++.|+|
T Consensus 450 ~--~~~nsr~iAYafP-------------~gy----~tq~Iklydm~~~Kiy~vTT~ta~------------DfsPaFD~ 498 (668)
T COG4946 450 D--WHPNSRWIAYAFP-------------EGY----YTQSIKLYDMDGGKIYDVTTPTAY------------DFSPAFDP 498 (668)
T ss_pred E--EcCCceeEEEecC-------------cce----eeeeEEEEecCCCeEEEecCCccc------------ccCcccCC
Confidence 3 9999999999752 111 133588899999887777765533 23568899
Q ss_pred cCcEEEEEEecCCCC
Q 011049 179 NQLKILTSKESKTEI 193 (494)
Q Consensus 179 d~~~~~~~~~s~~~p 193 (494)
|++.++|.....-+|
T Consensus 499 d~ryLYfLs~RsLdP 513 (668)
T COG4946 499 DGRYLYFLSARSLDP 513 (668)
T ss_pred CCcEEEEEeccccCC
Confidence 999888876655444
No 172
>PRK04940 hypothetical protein; Provisional
Probab=98.28 E-value=3.8e-05 Score=64.36 Aligned_cols=116 Identities=10% Similarity=0.068 Sum_probs=69.5
Q ss_pred CcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCC---CCcccccccccccHHHHHhcCccccccCCCCCEEE
Q 011049 344 SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTP---FGFQTEFRTLWEATNVYIEMSPITHANKIKKPILI 420 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li 420 (494)
++++++|.|+|||.|.+++.++ . .+| |++.|.+.....- .+.... .. .-.++...+.. .+-.-.+++
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~-g-~~a-VLiNPAv~P~~~L~~~ig~~~~-y~-~~~~~h~~eL~-----~~~p~r~~v 129 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC-G-IRQ-VIFNPNLFPEENMEGKIDRPEE-YA-DIATKCVTNFR-----EKNRDRCLV 129 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH-C-CCE-EEECCCCChHHHHHHHhCCCcc-hh-hhhHHHHHHhh-----hcCcccEEE
Confidence 4699999999999999999998 3 344 4456665431100 000000 00 00111111111 111234699
Q ss_pred EecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 421 IHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 421 ~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
+..+.|.+.+ +.++.+.++.. .+..+.+|..|.|.. .+..+..|++|+.
T Consensus 130 llq~gDEvLD--yr~a~~~y~~~------y~~~v~~GGdH~f~~---fe~~l~~I~~F~~ 178 (180)
T PRK04940 130 ILSRNDEVLD--SQRTAEELHPY------YEIVWDEEQTHKFKN---ISPHLQRIKAFKT 178 (180)
T ss_pred EEeCCCcccC--HHHHHHHhccC------ceEEEECCCCCCCCC---HHHHHHHHHHHHh
Confidence 9999999987 66654444321 257889999999864 4567888899884
No 173
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.28 E-value=3.9e-05 Score=73.50 Aligned_cols=70 Identities=19% Similarity=0.217 Sum_probs=54.5
Q ss_pred ccCCC-CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC-CcEEEEEcCCCCCc--cCCcccHHHHHHHHHHHHHHh
Q 011049 411 ANKIK-KPILIIHGEVDDKVGLFPMQAERFFDALKGHG-ALSRLVLLPFEHHV--YAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 411 ~~~~~-~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~--~~~~~~~~~~~~~~~~fl~~~ 482 (494)
+++|+ +|+|.+.|++|.++| +.++..+.+.....+ .+.+.++.++.||. +.+...+...+..+.+||.++
T Consensus 333 l~~I~~~pll~V~ge~D~I~p--~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 333 PGAITRVALLTVEGENDDISG--LGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred HHHCcccceEEEeccCCCcCC--HHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 56788 999999999999998 999988888764433 23456777788996 555566678888999999864
No 174
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.26 E-value=2e-05 Score=73.83 Aligned_cols=163 Identities=13% Similarity=0.188 Sum_probs=76.2
Q ss_pred ceeeeccCCCCCCCCCeeccccc--cccccceecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLD--LRFRSVSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~--~~~~~p~wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
.+||+++. +|+..+.+.... ...+..-|+|||+.|+|.+...+ ...-|+-++++++ +.+.+...+..
T Consensus 216 ~RiW~i~~---dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~--~~~~~~~~p~~----- 285 (386)
T PF14583_consen 216 QRIWTINT---DGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTG--ERRRLMEMPWC----- 285 (386)
T ss_dssp -SEEEEET---TS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT----EEEEEEE-SE-----
T ss_pred eEEEEEEc---CCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCC--CceEEEeCCce-----
Confidence 37999999 877766665432 23345679999999999887333 2345666777776 66666554432
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEE-ccCCCCCCCCCCceEeeecCCCceEEEEeeCcc-hhhhheeeeccCCC
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILL-NGRGFTPEGNIPFLDLFDINTGSKERIWESNRE-KYFETAVALVFGQG 172 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~s~~~ 172 (494)
...+ .|+||+.++=-.. +..+.. ..+|.. ....+.|++++++.++...|-..... ....+..... .-
T Consensus 286 -~H~~--ss~Dg~L~vGDG~-----d~p~~v~~~~~~~-~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~--hP 354 (386)
T PF14583_consen 286 -SHFM--SSPDGKLFVGDGG-----DAPVDVADAGGYK-IENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVT--HP 354 (386)
T ss_dssp -EEEE--E-TTSSEEEEEE-------------------------EEEEEETTTTEEEEEEE-------BTTBSSTT----
T ss_pred -eeeE--EcCCCCEEEecCC-----CCCccccccccce-ecCCcEEEEeccccCceeeeeeccCcceeecCCCccC--CC
Confidence 2223 6899985443221 111100 111211 12245799999998876655443211 0000000000 01
Q ss_pred cccccccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 173 EEDINLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 173 ~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
.++||||+++++|++ ...-++.||.+++.
T Consensus 355 hp~FSPDgk~VlF~S-d~~G~~~vY~v~i~ 383 (386)
T PF14583_consen 355 HPSFSPDGKWVLFRS-DMEGPPAVYLVEIP 383 (386)
T ss_dssp --EE-TTSSEEEEEE--TTSS-EEEEEE--
T ss_pred CCccCCCCCEEEEEC-CCCCCccEEEEeCc
Confidence 369999999999965 45667889998764
No 175
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.25 E-value=7.1e-05 Score=71.87 Aligned_cols=50 Identities=22% Similarity=0.320 Sum_probs=41.3
Q ss_pred cccCCCCCEEEEecCCCCCCCCCHHHHHHH-------HHHHHhCCCcEEEEEcCCCCCc
Q 011049 410 HANKIKKPILIIHGEVDDKVGLFPMQAERF-------FDALKGHGALSRLVLLPFEHHV 461 (494)
Q Consensus 410 ~~~~~~~P~li~~G~~D~~v~~~~~~~~~~-------~~~l~~~g~~~~~~~~~~~~H~ 461 (494)
.+.+|++|+++++|..|.+.| +.|+..+ .+.++..|..+-+.+-+..||-
T Consensus 292 DLr~Ir~Piivfas~gDnITP--P~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHL 348 (581)
T PF11339_consen 292 DLRNIRSPIIVFASYGDNITP--PQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHL 348 (581)
T ss_pred ehhhCCCCEEEEeccCCCCCC--hhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCce
Confidence 367899999999999999987 9998544 3556777888888888999996
No 176
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.21 E-value=7.9e-05 Score=68.31 Aligned_cols=108 Identities=14% Similarity=0.154 Sum_probs=67.7
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH---hCCeEEEeCCCCCCCCCCCCCCC--------chhHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL---ARRFAVLAGPSIPIIGEGDKLPN--------DRFVEQ 323 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~G~~v~~~~~~~~~g~g~~~~~--------~~~~~~ 323 (494)
.++|+++.|-|. ...++..+...|. ...|.|+. .+..|+...... .-..++
T Consensus 2 ~~li~~IPGNPG---------------lv~fY~~Fl~~L~~~l~~~~~i~~---ish~Gh~~~~~~~~~~~~~~~~sL~~ 63 (266)
T PF10230_consen 2 RPLIVFIPGNPG---------------LVEFYEEFLSALYEKLNPQFEILG---ISHAGHSTSPSNSKFSPNGRLFSLQD 63 (266)
T ss_pred cEEEEEECCCCC---------------hHHHHHHHHHHHHHhCCCCCeeEE---ecCCCCcCCcccccccCCCCccCHHH
Confidence 578899988651 2222223333444 34788888 334444322211 112344
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC---CceeEEEeCCCCCC
Q 011049 324 LVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGSYN 380 (494)
Q Consensus 324 ~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p---~~~~a~v~~~~~~~ 380 (494)
.++-..+.++.++........++.++|||.|+|+++.++.+.+ ..++.++...|...
T Consensus 64 QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 64 QIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred HHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 5555556666665543223478999999999999999999998 67888888888643
No 177
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.17 E-value=1.3e-05 Score=75.65 Aligned_cols=145 Identities=16% Similarity=0.137 Sum_probs=104.1
Q ss_pred HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCC-CCCCCC---------CC-CCCcc-----ccccccc-
Q 011049 334 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS-GSYNKT---------LT-PFGFQ-----TEFRTLW- 396 (494)
Q Consensus 334 ~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~-~~~~~~---------~~-~~~~~-----~~~~~~~- 396 (494)
++.+...++-++.+|.|.|==|..++.+++.. .|++|++.+. .+.|.. +- .|.+. .+.-..+
T Consensus 162 ~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~D-~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l 240 (367)
T PF10142_consen 162 FLKKKFGVNIEKFVVTGASKRGWTTWLTAAVD-PRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQL 240 (367)
T ss_pred HHHhhcCCCccEEEEeCCchHhHHHHHhhccC-cceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhc
Confidence 34444456789999999999999999988865 7888888653 333311 00 11110 0000000
Q ss_pred ---ccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHH
Q 011049 397 ---EATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIW 473 (494)
Q Consensus 397 ---~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~ 473 (494)
+..+...-.+|+.+.++++.|-|++.|..|+... ++.+.-++..|.. +..+.++|+.+|+... .+...
T Consensus 241 ~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~--pD~~~~y~d~L~G---~K~lr~vPN~~H~~~~----~~~~~ 311 (367)
T PF10142_consen 241 DTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFV--PDSSNFYYDKLPG---EKYLRYVPNAGHSLIG----SDVVQ 311 (367)
T ss_pred CCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceec--cCchHHHHhhCCC---CeeEEeCCCCCcccch----HHHHH
Confidence 1123445679999999999999999999999976 8999999999985 4588999999999874 47788
Q ss_pred HHHHHHHHhcCCCCC
Q 011049 474 ETDRWLQKYCLSNTS 488 (494)
Q Consensus 474 ~~~~fl~~~l~~~~~ 488 (494)
.+..|+...+.+.+.
T Consensus 312 ~l~~f~~~~~~~~~l 326 (367)
T PF10142_consen 312 SLRAFYNRIQNGRPL 326 (367)
T ss_pred HHHHHHHHHHcCCCC
Confidence 899999988776554
No 178
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.13 E-value=4.8e-05 Score=75.27 Aligned_cols=92 Identities=15% Similarity=0.151 Sum_probs=56.8
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeee-cc------ceEEEEEcCCCCCCCceEeeecccccc
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK-TS------QTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~-~~------~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
.|+++|+ ++|+...-.-.......+.|++||+.|+|++... .+ ..+||++.++++..+.+.|+++.....
T Consensus 151 ~l~v~Dl---~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~ 227 (414)
T PF02897_consen 151 TLRVFDL---ETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPF 227 (414)
T ss_dssp EEEEEET---TTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTT
T ss_pred EEEEEEC---CCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCc
Confidence 5788888 6664332111122223389999999999998633 23 789999999987445567877765432
Q ss_pred cCCCCCCceeeCCCCCEEEEEEeccC
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKIKKEN 117 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~~~~~ 117 (494)
....+.+|+||++|++.+....
T Consensus 228 ----~~~~~~~s~d~~~l~i~~~~~~ 249 (414)
T PF02897_consen 228 ----WFVSVSRSKDGRYLFISSSSGT 249 (414)
T ss_dssp ----SEEEEEE-TTSSEEEEEEESSS
T ss_pred ----EEEEEEecCcccEEEEEEEccc
Confidence 0112337999999888775443
No 179
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.12 E-value=2.1e-05 Score=81.14 Aligned_cols=93 Identities=17% Similarity=0.143 Sum_probs=62.5
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCC-----------------
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN----------------- 317 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~----------------- 317 (494)
.|+||++||.+ +....| ...+..|+++||.|+++|.+ |+|.+...
T Consensus 449 ~P~VVllHG~~-----------g~~~~~----~~lA~~La~~Gy~VIaiDlp---GHG~S~~~~~~~~~~a~~~~~~~y~ 510 (792)
T TIGR03502 449 WPVVIYQHGIT-----------GAKENA----LAFAGTLAAAGVATIAIDHP---LHGARSFDANASGVNATNANVLAYM 510 (792)
T ss_pred CcEEEEeCCCC-----------CCHHHH----HHHHHHHHhCCcEEEEeCCC---CCCccccccccccccccccCcccee
Confidence 68999999953 111122 23455778899999996654 34433111
Q ss_pred --------chhHHHHHHHHHHHHHHHH------Hc----CCCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 318 --------DRFVEQLVSSAEAAVEEVV------RR----GVADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 318 --------~~~~~~~~~d~~~~v~~l~------~~----~~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
.....+.+.|+......+. +. ...+..++.++|||+||.++..++...
T Consensus 511 Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 511 NLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 1134667888888777775 21 124567999999999999999998864
No 180
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.06 E-value=0.0001 Score=64.11 Aligned_cols=125 Identities=10% Similarity=0.073 Sum_probs=71.8
Q ss_pred ceeeeccCCCCCCCCCeeccc-cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~-~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
..||.++. .+.....+.- ........+|||+|+.|+.+.... +..+-+.++.+ +.+....... .
T Consensus 39 ~~l~~~~~---~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~--~~~v~lyd~~~-----~~i~~~~~~~-----~ 103 (194)
T PF08662_consen 39 FELFYLNE---KNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSM--PAKVTLYDVKG-----KKIFSFGTQP-----R 103 (194)
T ss_pred EEEEEEec---CCCccceeeccCCCceEEEEECcCCCEEEEEEccC--CcccEEEcCcc-----cEeEeecCCC-----c
Confidence 37888876 4444444432 233477889999999998775321 33566666652 2233222111 1
Q ss_pred CCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccc
Q 011049 97 SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDI 176 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~ 176 (494)
+ .+.|||+|++++..... ...+ .|..+|.+..+ .+-..... ......|
T Consensus 104 n-~i~wsP~G~~l~~~g~~---------------n~~G---~l~~wd~~~~~--~i~~~~~~-----------~~t~~~W 151 (194)
T PF08662_consen 104 N-TISWSPDGRFLVLAGFG---------------NLNG---DLEFWDVRKKK--KISTFEHS-----------DATDVEW 151 (194)
T ss_pred e-EEEECCCCCEEEEEEcc---------------CCCc---EEEEEECCCCE--EeeccccC-----------cEEEEEE
Confidence 2 24599999999886521 1112 37788887543 33221110 0123489
Q ss_pred cccCcEEEEEEec
Q 011049 177 NLNQLKILTSKES 189 (494)
Q Consensus 177 s~d~~~~~~~~~s 189 (494)
||||+.++...+.
T Consensus 152 sPdGr~~~ta~t~ 164 (194)
T PF08662_consen 152 SPDGRYLATATTS 164 (194)
T ss_pred cCCCCEEEEEEec
Confidence 9999988876654
No 181
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.05 E-value=0.00013 Score=74.26 Aligned_cols=130 Identities=7% Similarity=-0.002 Sum_probs=83.2
Q ss_pred ccccceecCCCceEEEEeee----eccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccC
Q 011049 42 RFRSVSWCDDSLALVNETWY----KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 117 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~----~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~ 117 (494)
....|+.||||+.++|+... +....+||+.+.++ +.+.+|.... + ..|. |||||++|+|....
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg---~~~~lt~g~~-~-----t~Ps--WspDG~~lw~v~dg-- 417 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG---VAVQVLEGHS-L-----TRPS--WSLDADAVWVVVDG-- 417 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC---cceeeecCCC-C-----CCce--ECCCCCceEEEecC--
Confidence 44689999999999999841 11256999999743 4577876553 2 5677 99999999998632
Q ss_pred ccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEE
Q 011049 118 DEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYH 197 (494)
Q Consensus 118 ~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~ 197 (494)
+...++.... ...+++++++++++.++ +. ++. -.+..|||||.++++... .++|
T Consensus 418 --~~~~~v~~~~-----~~gql~~~~vd~ge~~~-~~-~g~------------Issl~wSpDG~RiA~i~~-----g~v~ 471 (591)
T PRK13616 418 --NTVVRVIRDP-----ATGQLARTPVDASAVAS-RV-PGP------------ISELQLSRDGVRAAMIIG-----GKVY 471 (591)
T ss_pred --cceEEEeccC-----CCceEEEEeccCchhhh-cc-CCC------------cCeEEECCCCCEEEEEEC-----CEEE
Confidence 1122222211 12258888888876654 21 111 124589999999999763 4677
Q ss_pred E---EEcCCCceeEeec
Q 011049 198 I---LSWPLKKSSQITN 211 (494)
Q Consensus 198 ~---~~~~~~~~~~lt~ 211 (494)
+ ....++. .+|+.
T Consensus 472 Va~Vvr~~~G~-~~l~~ 487 (591)
T PRK13616 472 LAVVEQTEDGQ-YALTN 487 (591)
T ss_pred EEEEEeCCCCc-eeecc
Confidence 7 4444554 55543
No 182
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=98.04 E-value=8e-06 Score=83.80 Aligned_cols=131 Identities=21% Similarity=0.188 Sum_probs=82.8
Q ss_pred eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCC-CCCCCCCC
Q 011049 236 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI-PIIGEGDK 314 (494)
Q Consensus 236 ~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~-~~~g~g~~ 314 (494)
-+..-+|.|.....+ + +|++|++|||++..++... +.. ......+..+..+|+.+++| |..|+...
T Consensus 96 CLylNV~tp~~~~~~-~--~pV~V~iHGG~~~~gs~~~--------~~~--~~~~~~~~~~~VVvVt~~YRLG~lGF~st 162 (545)
T KOG1516|consen 96 CLYLNVYTPQGCSES-K--LPVMVYIHGGGFQFGSASS--------FEI--ISPAYVLLLKDVVVVTINYRLGPLGFLST 162 (545)
T ss_pred CceEEEeccCCCccC-C--CCEEEEEeCCceeeccccc--------hhh--cCchhccccCCEEEEEecccceeceeeec
Confidence 377788888764332 2 8999999999865443221 110 01122345567888887775 33343221
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHh--CCCceeEEEeCCCCC
Q 011049 315 LPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSY 379 (494)
Q Consensus 315 ~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~~~ 379 (494)
.......+....|+..|++|+.++ ..-||++|.|+|||+||..+..++.. ...+|..+|..+|..
T Consensus 163 ~d~~~~gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 163 GDSAAPGNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred CCCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 111111233456888999998774 23699999999999999998766542 125888888888753
No 183
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.96 E-value=0.00018 Score=64.76 Aligned_cols=151 Identities=15% Similarity=0.071 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC-----ceeEEEeCCCCCCCCCCCCCc-----cc
Q 011049 321 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-----LFCCGIARSGSYNKTLTPFGF-----QT 390 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-----~~~a~v~~~~~~~~~~~~~~~-----~~ 390 (494)
......-+..++.+|.++..+ +++-++||||||..+..++..+.. .+...|++++.++-......- ..
T Consensus 82 ~~~qa~wl~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~ 159 (255)
T PF06028_consen 82 YKKQAKWLKKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLN 159 (255)
T ss_dssp HHHHHHHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CS
T ss_pred HHHHHHHHHHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhc
Confidence 345577788899999998654 689999999999999999988632 467788888777643211100 00
Q ss_pred ccccccccHHHHHhcCccccccCC--CCCEEEEecC------CCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC--CCC
Q 011049 391 EFRTLWEATNVYIEMSPITHANKI--KKPILIIHGE------VDDKVGLFPMQAERFFDALKGHGALSRLVLLPF--EHH 460 (494)
Q Consensus 391 ~~~~~~~~~~~~~~~sp~~~~~~~--~~P~li~~G~------~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~H 460 (494)
..+ |-...+.|...-... -.++ .+.+|-|.|. .|..|| ...+..+...++.....++-.++.| +.|
T Consensus 160 ~~g-p~~~~~~y~~l~~~~-~~~~p~~i~VLnI~G~~~~g~~sDG~V~--~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~H 235 (255)
T PF06028_consen 160 KNG-PKSMTPMYQDLLKNR-RKNFPKNIQVLNIYGDLEDGSNSDGIVP--NASSLSLRYLLKNRAKSYQEKTVTGKDAQH 235 (255)
T ss_dssp TT--BSS--HHHHHHHHTH-GGGSTTT-EEEEEEEESBTTCSBTSSSB--HHHHCTHHHHCTTTSSEEEEEEEESGGGSC
T ss_pred ccC-CcccCHHHHHHHHHH-HhhCCCCeEEEEEecccCCCCCCCeEEe--HHHHHHHHHHhhcccCceEEEEEECCCCcc
Confidence 111 222223333221110 0222 3679999998 799998 8888888888887777788888876 578
Q ss_pred ccCCcccHHHHHHHHHHHH
Q 011049 461 VYAARENVMHVIWETDRWL 479 (494)
Q Consensus 461 ~~~~~~~~~~~~~~~~~fl 479 (494)
.-. .++. .+.+.|.+||
T Consensus 236 S~L-heN~-~V~~~I~~FL 252 (255)
T PF06028_consen 236 SQL-HENP-QVDKLIIQFL 252 (255)
T ss_dssp CGG-GCCH-HHHHHHHHHH
T ss_pred ccC-CCCH-HHHHHHHHHh
Confidence 744 2333 6666777776
No 184
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.94 E-value=2.8e-05 Score=56.26 Aligned_cols=75 Identities=16% Similarity=0.116 Sum_probs=51.5
Q ss_pred CceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCCCCCCC
Q 011049 234 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGD 313 (494)
Q Consensus 234 g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~ 313 (494)
|.+|....+.|++. +..+|+++||-+. ........+..|+++||.|+..| .+|+|.
T Consensus 1 G~~L~~~~w~p~~~------~k~~v~i~HG~~e---------------h~~ry~~~a~~L~~~G~~V~~~D---~rGhG~ 56 (79)
T PF12146_consen 1 GTKLFYRRWKPENP------PKAVVVIVHGFGE---------------HSGRYAHLAEFLAEQGYAVFAYD---HRGHGR 56 (79)
T ss_pred CcEEEEEEecCCCC------CCEEEEEeCCcHH---------------HHHHHHHHHHHHHhCCCEEEEEC---CCcCCC
Confidence 67889999999862 4789999999531 22223456778999999999944 456776
Q ss_pred CCCC---chhHHHHHHHHHHHH
Q 011049 314 KLPN---DRFVEQLVSSAEAAV 332 (494)
Q Consensus 314 ~~~~---~~~~~~~~~d~~~~v 332 (494)
+... ....++.++|+...+
T Consensus 57 S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 57 SEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CCCcccccCCHHHHHHHHHHHh
Confidence 6532 223466777776654
No 185
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.94 E-value=0.0012 Score=61.94 Aligned_cols=205 Identities=17% Similarity=0.158 Sum_probs=121.3
Q ss_pred CceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCC------
Q 011049 234 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP------ 307 (494)
Q Consensus 234 g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~------ 307 (494)
|.+-.-.||+|... +.+..+||++||.+.+ ..|..........|...|+.++...-.+
T Consensus 70 ~~~~flaL~~~~~~----~~~~G~vIilp~~g~~------------~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~ 133 (310)
T PF12048_consen 70 GEERFLALWRPANS----AKPQGAVIILPDWGEH------------PDWPGLIAPLRRELPDHGWATLSITLPDPAPPAS 133 (310)
T ss_pred CCEEEEEEEecccC----CCCceEEEEecCCCCC------------CCcHhHHHHHHHHhhhcCceEEEecCCCcccccC
Confidence 33445567777652 2236799999986421 1133333345568889999998721111
Q ss_pred -CC--------CCCCC--C---------------CCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHH
Q 011049 308 -II--------GEGDK--L---------------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361 (494)
Q Consensus 308 -~~--------g~g~~--~---------------~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~ 361 (494)
.. .-+.. . ....+......-+.+++.++.+++. .+|+|+||+.|+++++.+
T Consensus 134 p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~---~~ivlIg~G~gA~~~~~~ 210 (310)
T PF12048_consen 134 PNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG---KNIVLIGHGTGAGWAARY 210 (310)
T ss_pred CccCCCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC---ceEEEEEeChhHHHHHHH
Confidence 00 00000 0 0112234456667778888888773 569999999999999999
Q ss_pred HHhCCC-ceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHH
Q 011049 362 LAHAPH-LFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFF 440 (494)
Q Consensus 362 ~~~~p~-~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~ 440 (494)
+...+. .+.+.|.+++-..... ........+.+++.|+|=|++.+... ..+.....
T Consensus 211 la~~~~~~~daLV~I~a~~p~~~-------------------~n~~l~~~la~l~iPvLDi~~~~~~~----~~~~a~~R 267 (310)
T PF12048_consen 211 LAEKPPPMPDALVLINAYWPQPD-------------------RNPALAEQLAQLKIPVLDIYSADNPA----SQQTAKQR 267 (310)
T ss_pred HhcCCCcccCeEEEEeCCCCcch-------------------hhhhHHHHhhccCCCEEEEecCCChH----HHHHHHHH
Confidence 998864 4788888877422100 01122234567889999999888332 22222232
Q ss_pred HHH-HhC-CCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 441 DAL-KGH-GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 441 ~~l-~~~-g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
+.+ +++ ...++-+.+++..|.... ......++|..||.++
T Consensus 268 ~~~a~r~~~~~YrQ~~L~~~~~~~~~--~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 268 KQAAKRNKKPDYRQIQLPGLPDNPSG--WQEQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHhccCCCceeEecCCCCCChhh--HHHHHHHHHHHHHHhh
Confidence 222 222 244666677777665532 2223788999999876
No 186
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.88 E-value=0.00042 Score=65.16 Aligned_cols=87 Identities=13% Similarity=0.041 Sum_probs=60.4
Q ss_pred hHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc
Q 011049 289 SSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL 368 (494)
Q Consensus 289 ~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~ 368 (494)
....++++|..|+..+-+ ....+ .....+.+...+++..+++.+++... .++|-++|+|.||.+++.++++.+.+
T Consensus 131 ~V~~l~~~g~~vfvIsw~-nPd~~--~~~~~~edYi~e~l~~aid~v~~itg--~~~InliGyCvGGtl~~~ala~~~~k 205 (445)
T COG3243 131 LVRWLLEQGLDVFVISWR-NPDAS--LAAKNLEDYILEGLSEAIDTVKDITG--QKDINLIGYCVGGTLLAAALALMAAK 205 (445)
T ss_pred HHHHHHHcCCceEEEecc-CchHh--hhhccHHHHHHHHHHHHHHHHHHHhC--ccccceeeEecchHHHHHHHHhhhhc
Confidence 456788999999884432 11111 11223333344788889998888643 36799999999999999999999877
Q ss_pred -eeEEEeCCCCCC
Q 011049 369 -FCCGIARSGSYN 380 (494)
Q Consensus 369 -~~a~v~~~~~~~ 380 (494)
++.+..+....|
T Consensus 206 ~I~S~T~lts~~D 218 (445)
T COG3243 206 RIKSLTLLTSPVD 218 (445)
T ss_pred ccccceeeecchh
Confidence 777777655444
No 187
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.86 E-value=0.00039 Score=63.05 Aligned_cols=65 Identities=15% Similarity=0.087 Sum_probs=58.5
Q ss_pred CCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 413 KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 413 ~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
...+|-|.+.++.|..++ ....+++++..+++|.+++...|.+..|.-+...+.+.+.+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~--~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIP--WRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcC--HHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 345899999999999998 99999999999999999999999999999888888888888888774
No 188
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.80 E-value=0.00082 Score=65.56 Aligned_cols=116 Identities=17% Similarity=0.217 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHH--cCCCCCCcEEEEecChHHHHHHHHHHhCCCc-eeEEEeCCCCCCCCCCCCCcccccccccccHHH
Q 011049 325 VSSAEAAVEEVVR--RGVADPSRIAVGGHSYGAFMTAHLLAHAPHL-FCCGIARSGSYNKTLTPFGFQTEFRTLWEATNV 401 (494)
Q Consensus 325 ~~d~~~~v~~l~~--~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~-~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (494)
.+-+..+.++.+. .+..-...|.++|+|+|+.++.++.....+. +.|+|++.=..+...-+.+...
T Consensus 229 ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgprgirD----------- 297 (784)
T KOG3253|consen 229 AEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPRGIRD----------- 297 (784)
T ss_pred HHHHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcccCCcc-----------
Confidence 3334444443322 2334457899999999988888777665544 5666665432221111111111
Q ss_pred HHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC
Q 011049 402 YIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA 463 (494)
Q Consensus 402 ~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 463 (494)
..+-.++.|+|++.|.+|..++ +...+++.+++++. ++++++.+++|.+.
T Consensus 298 -------E~Lldmk~PVLFV~Gsnd~mcs--pn~ME~vreKMqA~---~elhVI~~adhsma 347 (784)
T KOG3253|consen 298 -------EALLDMKQPVLFVIGSNDHMCS--PNSMEEVREKMQAE---VELHVIGGADHSMA 347 (784)
T ss_pred -------hhhHhcCCceEEEecCCcccCC--HHHHHHHHHHhhcc---ceEEEecCCCcccc
Confidence 1223467999999999999987 88778888888764 78999999999975
No 189
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.74 E-value=0.00026 Score=63.02 Aligned_cols=54 Identities=15% Similarity=0.151 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHHhCC---CceeEEEeCCCC
Q 011049 325 VSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGS 378 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~---~~d~~ri~i~G~S~GG~~a~~~~~~~p---~~~~a~v~~~~~ 378 (494)
.+-+..+++.+.+.. ...+++|.++||||||.++-.++...+ +.++.+|.++..
T Consensus 63 ~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 63 AEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred HHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 344455555555432 346789999999999999988877653 467777776543
No 190
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.72 E-value=0.00063 Score=56.00 Aligned_cols=118 Identities=16% Similarity=0.103 Sum_probs=77.1
Q ss_pred CCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCcccccccccccHHHHHhcCccccccCCCCCEEEEe
Q 011049 343 PSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRTLWEATNVYIEMSPITHANKIKKPILIIH 422 (494)
Q Consensus 343 ~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~li~~ 422 (494)
++.+++++||.|..++++++.+....++++++++|.--... -..+......+|... .++.-|.++++
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~------------~~~~~~~~tf~~~p~-~~lpfps~vva 124 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRP------------EIRPKHLMTFDPIPR-EPLPFPSVVVA 124 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCcccc------------ccchhhccccCCCcc-ccCCCceeEEE
Confidence 35599999999999999999888778999999988521100 001111122233222 22346899999
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC--CcccHHHHHHHHHHHHH
Q 011049 423 GEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA--ARENVMHVIWETDRWLQ 480 (494)
Q Consensus 423 G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~--~~~~~~~~~~~~~~fl~ 480 (494)
..+|+.|+ +++++.+.++.-. .++...++||-.. +.....+-+..+.+|+.
T Consensus 125 SrnDp~~~--~~~a~~~a~~wgs-----~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s 177 (181)
T COG3545 125 SRNDPYVS--YEHAEDLANAWGS-----ALVDVGEGGHINAESGFGPWPEGYALLAQLLS 177 (181)
T ss_pred ecCCCCCC--HHHHHHHHHhccH-----hheecccccccchhhcCCCcHHHHHHHHHHhh
Confidence 99999998 9999999888864 5777778888532 12233344444444443
No 191
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.72 E-value=0.00075 Score=61.82 Aligned_cols=119 Identities=17% Similarity=0.100 Sum_probs=78.5
Q ss_pred ccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCC-----CchhHHHHH-hC
Q 011049 223 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM-----TPTSSLIFL-AR 296 (494)
Q Consensus 223 ~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~-~~ 296 (494)
..+++.++. |+..+....+.-++..+ -.-|++.-|.+. .+... .......++ ..
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a~~-----~RWiL~s~GNg~--------------~~E~~~~~~~~~~~~~~~ak~~ 170 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEAKP-----QRWILVSNGNGE--------------CYENRAMLDYKDDWIQRFAKEL 170 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCCCC-----CcEEEEEcCChH--------------HhhhhhhhccccHHHHHHHHHc
Confidence 567888885 99999888876444322 235666655321 11110 011223333 47
Q ss_pred CeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC-CCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 297 RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG-VADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 297 G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~-~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
|-+|+..||+| .|.+..... .++++.|..++++||+++. .+.+++|.+.|||.||.++..++.++
T Consensus 171 ~aNvl~fNYpG---Vg~S~G~~s-~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 171 GANVLVFNYPG---VGSSTGPPS-RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCcEEEECCCc---cccCCCCCC-HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 88888877754 444433333 4889999999999999743 37889999999999999998766654
No 192
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.69 E-value=0.0011 Score=57.71 Aligned_cols=149 Identities=17% Similarity=0.151 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC-----ceeEEEeCCCCCCC-CCCCC-Ccc--cccc
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-----LFCCGIARSGSYNK-TLTPF-GFQ--TEFR 393 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~-----~~~a~v~~~~~~~~-~~~~~-~~~--~~~~ 393 (494)
+...-+..++.+|.++..+ .++-++|||+||.....++..+.+ .++-.|++++.++. ...+- ... ...+
T Consensus 117 ~~s~wlk~~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~ 194 (288)
T COG4814 117 DQSKWLKKAMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDG 194 (288)
T ss_pred hHHHHHHHHHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccC
Confidence 3356678889999998755 568899999999999888887632 34666666666551 11000 000 0000
Q ss_pred cc-cccH-HHHHhcCccccccCC--CCCEEEEecCC------CCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCC--CCCc
Q 011049 394 TL-WEAT-NVYIEMSPITHANKI--KKPILIIHGEV------DDKVGLFPMQAERFFDALKGHGALSRLVLLPF--EHHV 461 (494)
Q Consensus 394 ~~-~~~~-~~~~~~sp~~~~~~~--~~P~li~~G~~------D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~H~ 461 (494)
.. -..+ ..|... ....+ .+-+|+|.|+. |..|| ...+...+..+...++.+.-.+|+| +.|.
T Consensus 195 ~~~~~t~y~~y~~~----n~k~v~~~~evl~IaGDl~dg~~tDG~Vp--~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs 268 (288)
T COG4814 195 PGLIKTPYYDYIAK----NYKKVSPNTEVLLIAGDLDDGKQTDGAVP--WASSLSIYHLFKKNGKSYIESLYKGKDARHS 268 (288)
T ss_pred ccccCcHHHHHHHh----cceeCCCCcEEEEEecccccCCcCCCcee--chHhHHHHHHhccCcceeEEEeeeCCcchhh
Confidence 00 0000 111110 11112 36799999985 46776 7778888888888877776667765 5776
Q ss_pred cCCcccHHHHHHHHHHHHHH
Q 011049 462 YAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 462 ~~~~~~~~~~~~~~~~fl~~ 481 (494)
-. +++. .+...+..||.+
T Consensus 269 ~l-hen~-~v~~yv~~FLw~ 286 (288)
T COG4814 269 KL-HENP-TVAKYVKNFLWE 286 (288)
T ss_pred cc-CCCh-hHHHHHHHHhhc
Confidence 43 2332 555566666643
No 193
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.65 E-value=0.0024 Score=54.43 Aligned_cols=87 Identities=13% Similarity=0.128 Sum_probs=63.8
Q ss_pred hHHHHHhCCeEEEeCCCCCC-CCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC--
Q 011049 289 SSLIFLARRFAVLAGPSIPI-IGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-- 365 (494)
Q Consensus 289 ~~~~l~~~G~~v~~~~~~~~-~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~-- 365 (494)
....+-+.+|..+.+-.+.+ .|+|.. ...+.++|+..+++++...++ ...|+++|||-|-.-.++++++.
T Consensus 58 L~~~lde~~wslVq~q~~Ssy~G~Gt~-----slk~D~edl~~l~~Hi~~~~f--St~vVL~GhSTGcQdi~yYlTnt~~ 130 (299)
T KOG4840|consen 58 LNRYLDENSWSLVQPQLRSSYNGYGTF-----SLKDDVEDLKCLLEHIQLCGF--STDVVLVGHSTGCQDIMYYLTNTTK 130 (299)
T ss_pred HHHHHhhccceeeeeeccccccccccc-----cccccHHHHHHHHHHhhccCc--ccceEEEecCccchHHHHHHHhccc
Confidence 44467789999887544322 345543 234568899999998876654 35899999999998888887543
Q ss_pred CCceeEEEeCCCCCCCC
Q 011049 366 PHLFCCGIARSGSYNKT 382 (494)
Q Consensus 366 p~~~~a~v~~~~~~~~~ 382 (494)
|..++++|+.+|++|..
T Consensus 131 ~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 131 DRKIRAAILQAPVSDRE 147 (299)
T ss_pred hHHHHHHHHhCccchhh
Confidence 46789999999999854
No 194
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=97.64 E-value=0.00015 Score=74.72 Aligned_cols=87 Identities=6% Similarity=-0.091 Sum_probs=62.7
Q ss_pred ceeeeccCCCCCCCCCeec-cccccccccceecCCCceEEE-Eeeee--ccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 18 DIIYTQPAEPAEGEKPEIL-HKLDLRFRSVSWCDDSLALVN-ETWYK--TSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~l-t~~~~~~~~p~wspDg~~i~f-~~~~~--~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
++|.++|. +|..++.+ +........|+|||||+.|+| ++... + ...||+.++++.......|--++.
T Consensus 329 ~~L~~~D~---dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g-~s~vYv~~L~t~~~~~vkl~ve~a----- 399 (912)
T TIGR02171 329 GNLAYIDY---TKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPG-KSSVYVRNLNASGSGLVKLPVENA----- 399 (912)
T ss_pred CeEEEEec---CCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCC-CceEEEEehhccCCCceEeecccc-----
Confidence 48999999 99999988 888888889999999999999 54444 4 788999999875334344433322
Q ss_pred CCCCCceeeCCCC-CEEEEEEec
Q 011049 94 DPGSPMMTRTSTG-TNVIAKIKK 115 (494)
Q Consensus 94 ~~~~~~~~~spDG-~~i~~~~~~ 115 (494)
.-|.....+.| +-|+|.+..
T Consensus 400 --aiprwrv~e~gdt~ivyv~~a 420 (912)
T TIGR02171 400 --AIPRWRVLENGDTVIVYVSDA 420 (912)
T ss_pred --cccceEecCCCCeEEEEEcCC
Confidence 34443346666 456777653
No 195
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.64 E-value=0.0011 Score=65.47 Aligned_cols=138 Identities=14% Similarity=0.047 Sum_probs=83.2
Q ss_pred cceecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 45 SVSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
..++||||+.|+|..+.+| ....++++|+++| +.+.+.-.... ... +.|++||+.++|..........
T Consensus 128 ~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg----~~l~d~i~~~~----~~~-~~W~~d~~~~~y~~~~~~~~~~-- 196 (414)
T PF02897_consen 128 GFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETG----KFLPDGIENPK----FSS-VSWSDDGKGFFYTRFDEDQRTS-- 196 (414)
T ss_dssp EEEETTTSSEEEEEEEETTSSEEEEEEEETTTT----EEEEEEEEEEE----SEE-EEECTTSSEEEEEECSTTTSS---
T ss_pred eeeECCCCCEEEEEecCCCCceEEEEEEECCCC----cCcCCcccccc----cce-EEEeCCCCEEEEEEeCcccccc--
Confidence 5679999999999987655 4578999999987 33333211110 111 4499999999998743210000
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceE--EEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEc
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKE--RIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 201 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~--~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~ 201 (494)
.......++++.+.+...+ .+++.....+ ..+ ....|+|++.+++...+...-.++|++++
T Consensus 197 --------~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~--~~~-------~~~~s~d~~~l~i~~~~~~~~s~v~~~d~ 259 (414)
T PF02897_consen 197 --------DSGYPRQVYRHKLGTPQSEDELVFEEPDEPF--WFV-------SVSRSKDGRYLFISSSSGTSESEVYLLDL 259 (414)
T ss_dssp --------CCGCCEEEEEEETTS-GGG-EEEEC-TTCTT--SEE-------EEEE-TTSSEEEEEEESSSSEEEEEEEEC
T ss_pred --------cCCCCcEEEEEECCCChHhCeeEEeecCCCc--EEE-------EEEecCcccEEEEEEEccccCCeEEEEec
Confidence 0111335888888776543 5666543311 011 23668889888877766554468999998
Q ss_pred CCC-----ceeEee
Q 011049 202 PLK-----KSSQIT 210 (494)
Q Consensus 202 ~~~-----~~~~lt 210 (494)
..+ +.+.+.
T Consensus 260 ~~~~~~~~~~~~l~ 273 (414)
T PF02897_consen 260 DDGGSPDAKPKLLS 273 (414)
T ss_dssp CCTTTSS-SEEEEE
T ss_pred cccCCCcCCcEEEe
Confidence 764 455554
No 196
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.54 E-value=0.00054 Score=68.07 Aligned_cols=61 Identities=28% Similarity=0.264 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHcC-CCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCC
Q 011049 321 VEQLVSSAEAAVEEVVRRG-VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 381 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~-~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~ 381 (494)
.++.+.|+...++++..+- ..+..+++++|.||||.+|+++-.++|++|.++++-++++..
T Consensus 89 ~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 89 SEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 5678999999999998653 335569999999999999999999999999999998887653
No 197
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.52 E-value=0.0042 Score=56.17 Aligned_cols=220 Identities=15% Similarity=0.149 Sum_probs=114.6
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCc-cCCCCchhHHHHHhCCeEEEeCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE-FSGMTPTSSLIFLARRFAVLAGPSIP 307 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~~~ 307 (494)
+++.-| .+.+.++-..+ +.+|+||-.|=-|- +... |..+............|.++.++..|
T Consensus 4 v~t~~G-~v~V~v~G~~~------~~kp~ilT~HDvGl-----------Nh~scF~~ff~~~~m~~i~~~f~i~Hi~aPG 65 (283)
T PF03096_consen 4 VETPYG-SVHVTVQGDPK------GNKPAILTYHDVGL-----------NHKSCFQGFFNFEDMQEILQNFCIYHIDAPG 65 (283)
T ss_dssp EEETTE-EEEEEEESS--------TTS-EEEEE--TT-------------HHHHCHHHHCSHHHHHHHTTSEEEEEE-TT
T ss_pred eccCce-EEEEEEEecCC------CCCceEEEeccccc-----------cchHHHHHHhcchhHHHHhhceEEEEEeCCC
Confidence 455556 67777774332 13799999994321 1111 33222233334456788888755533
Q ss_pred CCCCCCCCCCch--h--HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCC-
Q 011049 308 IIGEGDKLPNDR--F--VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT- 382 (494)
Q Consensus 308 ~~g~g~~~~~~~--~--~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~- 382 (494)
. ..|....... + .+++.+++..+++++ +. +.+..+|--+|+++-..+|..+|+++-+.|++++.....
T Consensus 66 q-e~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f---~l---k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g 138 (283)
T PF03096_consen 66 Q-EEGAATLPEGYQYPSMDQLAEMLPEVLDHF---GL---KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG 138 (283)
T ss_dssp T-STT-----TT-----HHHHHCTHHHHHHHH---T------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---
T ss_pred C-CCCcccccccccccCHHHHHHHHHHHHHhC---Cc---cEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc
Confidence 2 2232222222 2 345555666666655 32 568999999999999999999999999999998864411
Q ss_pred -------------CCCCCccc-------------ccc-ccc-------------ccH-------HHHHhcCc-cccccCC
Q 011049 383 -------------LTPFGFQT-------------EFR-TLW-------------EAT-------NVYIEMSP-ITHANKI 414 (494)
Q Consensus 383 -------------~~~~~~~~-------------~~~-~~~-------------~~~-------~~~~~~sp-~~~~~~~ 414 (494)
+...+... +.. ..- .++ +.|..... .......
T Consensus 139 w~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~ 218 (283)
T PF03096_consen 139 WMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSL 218 (283)
T ss_dssp HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTC
T ss_pred HHHHHHHHHhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCC
Confidence 10001100 000 000 000 11111111 1224455
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.+|+|++.|+..+. .+++.++..+|-. .+.+++..+++|=... .+.+.+..+.+.=|++
T Consensus 219 ~c~vLlvvG~~Sp~----~~~vv~~ns~Ldp--~~ttllkv~dcGglV~-eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 219 GCPVLLVVGDNSPH----VDDVVEMNSKLDP--TKTTLLKVADCGGLVL-EEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp CS-EEEEEETTSTT----HHHHHHHHHHS-C--CCEEEEEETT-TT-HH-HH-HHHHHHHHHHHHH
T ss_pred CCCeEEEEecCCcc----hhhHHHHHhhcCc--ccceEEEecccCCccc-ccCcHHHHHHHHHHHc
Confidence 69999999999987 6788899998854 4578999998765443 3555566555555554
No 198
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=97.52 E-value=0.01 Score=51.69 Aligned_cols=150 Identities=9% Similarity=0.064 Sum_probs=85.1
Q ss_pred cccceecCCCceEEEEeeee--c------cceEEEEEcCCCCCCCceEeeecc-cccccCCCCCCceeeCCCCCEEEEEE
Q 011049 43 FRSVSWCDDSLALVNETWYK--T------SQTRTWLVCPGSKDVAPRVLFDRV-FENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~--~------~~~~~~~~~~~~g~~~~~~lt~~~-~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
.....|+|+|+.|++....+ . ...+||.++..+. ....+.-.. +.. .. +.|||+|++++...
T Consensus 8 ~~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~--~~~~i~l~~~~~I-----~~--~~WsP~g~~favi~ 78 (194)
T PF08662_consen 8 DAKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNI--PVESIELKKEGPI-----HD--VAWSPNGNEFAVIY 78 (194)
T ss_pred eEEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCC--ccceeeccCCCce-----EE--EEECcCCCEEEEEE
Confidence 44678999999999887621 1 2578999987765 333332221 111 11 33999999988765
Q ss_pred eccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCC
Q 011049 114 KKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEI 193 (494)
Q Consensus 114 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p 193 (494)
.. . .. .+.++|+++.....+ .... .+...|||+|+.+++... .+.+
T Consensus 79 g~---------------~--~~--~v~lyd~~~~~i~~~--~~~~------------~n~i~wsP~G~~l~~~g~-~n~~ 124 (194)
T PF08662_consen 79 GS---------------M--PA--KVTLYDVKGKKIFSF--GTQP------------RNTISWSPDGRFLVLAGF-GNLN 124 (194)
T ss_pred cc---------------C--Cc--ccEEEcCcccEeEee--cCCC------------ceEEEECCCCCEEEEEEc-cCCC
Confidence 21 1 11 356666653222111 1111 123489999988777543 3456
Q ss_pred CeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCC
Q 011049 194 TQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPP 245 (494)
Q Consensus 194 ~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~ 245 (494)
.++..+|.... +.+...... ....+.|. +||..+-.....|.
T Consensus 125 G~l~~wd~~~~--~~i~~~~~~-------~~t~~~Ws-PdGr~~~ta~t~~r 166 (194)
T PF08662_consen 125 GDLEFWDVRKK--KKISTFEHS-------DATDVEWS-PDGRYLATATTSPR 166 (194)
T ss_pred cEEEEEECCCC--EEeeccccC-------cEEEEEEc-CCCCEEEEEEeccc
Confidence 78888887633 334332211 13455554 78877766666554
No 199
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=97.51 E-value=0.015 Score=54.37 Aligned_cols=141 Identities=10% Similarity=-0.023 Sum_probs=77.0
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
..+.|++++. .+++...............|+|||+.++..... ...+++.++.++ + .+....... .+
T Consensus 51 ~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~---~~~l~~~d~~~~--~--~~~~~~~~~---~~ 117 (300)
T TIGR03866 51 DSDTIQVIDL---ATGEVIGTLPSGPDPELFALHPNGKILYIANED---DNLVTVIDIETR--K--VLAEIPVGV---EP 117 (300)
T ss_pred CCCeEEEEEC---CCCcEEEeccCCCCccEEEECCCCCEEEEEcCC---CCeEEEEECCCC--e--EEeEeeCCC---Cc
Confidence 3457888887 555544322222223467899999977654322 347888888764 2 222222111 11
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
. .+.|+|||+.+++.... . ..+..+|.++++.......... .....
T Consensus 118 ~--~~~~~~dg~~l~~~~~~------------------~--~~~~~~d~~~~~~~~~~~~~~~------------~~~~~ 163 (300)
T TIGR03866 118 E--GMAVSPDGKIVVNTSET------------------T--NMAHFIDTKTYEIVDNVLVDQR------------PRFAE 163 (300)
T ss_pred c--eEEECCCCCEEEEEecC------------------C--CeEEEEeCCCCeEEEEEEcCCC------------ccEEE
Confidence 2 23489999988776421 1 1244567666543321111110 01237
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
|++|+..+++... ....++++++++++.
T Consensus 164 ~s~dg~~l~~~~~---~~~~v~i~d~~~~~~ 191 (300)
T TIGR03866 164 FTADGKELWVSSE---IGGTVSVIDVATRKV 191 (300)
T ss_pred ECCCCCEEEEEcC---CCCEEEEEEcCccee
Confidence 8899887766432 235688888877653
No 200
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.44 E-value=0.008 Score=55.07 Aligned_cols=159 Identities=9% Similarity=0.031 Sum_probs=86.9
Q ss_pred ceeeeccCCCCCCCCCeecccccccc-cc---ceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRF-RS---VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~-~~---p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
++|++.++ +.|+.+..+...... .+ ..|.|+||..+.+...+. .-.+|-++..+|..+..+....-..++-.
T Consensus 167 Dri~~y~~---~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~s-tV~v~~y~~~~g~~~~lQ~i~tlP~dF~g 242 (346)
T COG2706 167 DRIFLYDL---DDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNS-TVDVLEYNPAVGKFEELQTIDTLPEDFTG 242 (346)
T ss_pred ceEEEEEc---ccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCC-EEEEEEEcCCCceEEEeeeeccCccccCC
Confidence 36777776 445444433322222 23 469999997666655554 45666666655533333322222222211
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEE--eeCcchhhhheeeeccCC
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW--ESNREKYFETAVALVFGQ 171 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~--~~~~~~~~~~~~~~~s~~ 171 (494)
....-.+-.||||++|+..-+. . +.-.++.+|.++|+.+.+- ...+. .+
T Consensus 243 ~~~~aaIhis~dGrFLYasNRg--------------~----dsI~~f~V~~~~g~L~~~~~~~teg~----------~P- 293 (346)
T COG2706 243 TNWAAAIHISPDGRFLYASNRG--------------H----DSIAVFSVDPDGGKLELVGITPTEGQ----------FP- 293 (346)
T ss_pred CCceeEEEECCCCCEEEEecCC--------------C----CeEEEEEEcCCCCEEEEEEEeccCCc----------CC-
Confidence 1222334479999988665321 1 1123678888888755432 22222 00
Q ss_pred CcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEee
Q 011049 172 GEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 210 (494)
Q Consensus 172 ~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt 210 (494)
..-.|+++|+.+++..+.... -.+|..+.++++...+.
T Consensus 294 R~F~i~~~g~~Liaa~q~sd~-i~vf~~d~~TG~L~~~~ 331 (346)
T COG2706 294 RDFNINPSGRFLIAANQKSDN-ITVFERDKETGRLTLLG 331 (346)
T ss_pred ccceeCCCCCEEEEEccCCCc-EEEEEEcCCCceEEecc
Confidence 122677888877776655433 56888888888766554
No 201
>PRK10115 protease 2; Provisional
Probab=97.41 E-value=0.0037 Score=65.46 Aligned_cols=123 Identities=10% Similarity=0.042 Sum_probs=74.9
Q ss_pred cccceecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccce
Q 011049 43 FRSVSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~ 121 (494)
.....|||||+.|+|..+.++ +..+|+++++++|..-+..+... ...+.|++||+.++|.....
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~----------~~~~~w~~D~~~~~y~~~~~----- 193 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV----------EPSFVWANDSWTFYYVRKHP----- 193 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc----------ceEEEEeeCCCEEEEEEecC-----
Confidence 345789999999999987554 57889999998772113333221 12245999999999987421
Q ss_pred EEEEccCCCCCCCCCCceEeeecCCC--ceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEE
Q 011049 122 YILLNGRGFTPEGNIPFLDLFDINTG--SKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHIL 199 (494)
Q Consensus 122 ~~~~~~~g~~~~~~~~~l~~~d~~~g--~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~ 199 (494)
+ ......+|++++.++ +.+.|+.......+ + ....+.|++.+++...+. ...+++++
T Consensus 194 -------~---~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~-----~-----~~~~s~d~~~l~i~~~~~-~~~~~~l~ 252 (686)
T PRK10115 194 -------V---TLLPYQVWRHTIGTPASQDELVYEEKDDTFY-----V-----SLHKTTSKHYVVIHLASA-TTSEVLLL 252 (686)
T ss_pred -------C---CCCCCEEEEEECCCChhHCeEEEeeCCCCEE-----E-----EEEEcCCCCEEEEEEECC-ccccEEEE
Confidence 0 012246999999988 55667764322110 0 112344677666555443 33566766
Q ss_pred Ec
Q 011049 200 SW 201 (494)
Q Consensus 200 ~~ 201 (494)
+.
T Consensus 253 ~~ 254 (686)
T PRK10115 253 DA 254 (686)
T ss_pred EC
Confidence 63
No 202
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.39 E-value=0.00068 Score=66.30 Aligned_cols=87 Identities=10% Similarity=0.170 Sum_probs=61.6
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 367 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~ 367 (494)
.....|.+.||.+- .+..|.|.++.........++++.+.++.+.+... ..++.++||||||.++..++..+|+
T Consensus 112 ~li~~L~~~GY~~~----~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~~fl~~~p~ 185 (440)
T PLN02733 112 DMIEQLIKWGYKEG----KTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVKCFMSLHSD 185 (440)
T ss_pred HHHHHHHHcCCccC----CCcccCCCCccccccHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHHHHHHHCCH
Confidence 34567889999762 24455665555433345557788888887776532 3689999999999999999988876
Q ss_pred c----eeEEEeCCCCCC
Q 011049 368 L----FCCGIARSGSYN 380 (494)
Q Consensus 368 ~----~~a~v~~~~~~~ 380 (494)
. ++..|++++.+.
T Consensus 186 ~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 186 VFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred hHHhHhccEEEECCCCC
Confidence 4 577777776544
No 203
>COG3150 Predicted esterase [General function prediction only]
Probab=97.39 E-value=0.0067 Score=49.44 Aligned_cols=120 Identities=8% Similarity=0.086 Sum_probs=62.8
Q ss_pred cEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCCCCCCccccccc-----cccc-HHHHHhcCccccccCCCC-C
Q 011049 345 RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQTEFRT-----LWEA-TNVYIEMSPITHANKIKK-P 417 (494)
Q Consensus 345 ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~sp~~~~~~~~~-P 417 (494)
.++|+|-|.|||.+.+++.++ -+++++ +.|.....-.-.++-.+... .|.. .......- ...+..++. .
T Consensus 60 ~p~ivGssLGGY~At~l~~~~--Girav~-~NPav~P~e~l~gylg~~en~ytg~~y~le~~hI~~l~-~~~~~~l~~p~ 135 (191)
T COG3150 60 SPLIVGSSLGGYYATWLGFLC--GIRAVV-FNPAVRPYELLTGYLGRPENPYTGQEYVLESRHIATLC-VLQFRELNRPR 135 (191)
T ss_pred CceEEeecchHHHHHHHHHHh--CChhhh-cCCCcCchhhhhhhcCCCCCCCCcceEEeehhhHHHHH-HhhccccCCCc
Confidence 489999999999999999987 345554 33433211000001001111 1100 01111111 112233333 3
Q ss_pred EEEEecCC-CCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 418 ILIIHGEV-DDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 418 ~li~~G~~-D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.|.+-... |.... +.++.+.+... ...+..|..|.|.. ....+++|..|..
T Consensus 136 ~~~lL~qtgDEvLD--yr~a~a~y~~~-------~~~V~dgg~H~F~~---f~~~l~~i~aF~g 187 (191)
T COG3150 136 CLVLLSQTGDEVLD--YRQAVAYYHPC-------YEIVWDGGDHKFKG---FSRHLQRIKAFKG 187 (191)
T ss_pred EEEeecccccHHHH--HHHHHHHhhhh-------hheeecCCCccccc---hHHhHHHHHHHhc
Confidence 55555554 88655 55554444433 45677889999864 4467788888764
No 204
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.38 E-value=0.0024 Score=63.41 Aligned_cols=142 Identities=11% Similarity=0.040 Sum_probs=78.1
Q ss_pred CceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCC---CchhHHHHHhCCeEEEeCCCCCCCC
Q 011049 234 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM---TPTSSLIFLARRFAVLAGPSIPIIG 310 (494)
Q Consensus 234 g~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~G~~v~~~~~~~~~g 310 (494)
+..+..|++...+ ++. ..|+|+|++|||..+.-.....--+|-.+..- .......|...+..++. +..-..|
T Consensus 60 ~~~lFyw~~~s~~-~~~---~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~i-DqP~G~G 134 (462)
T PTZ00472 60 DKHYFYWAFGPRN-GNP---EAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYV-DQPAGVG 134 (462)
T ss_pred CceEEEEEEEcCC-CCC---CCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEE-eCCCCcC
Confidence 5678888887764 222 27999999999855421111010111111100 00111134455555554 3211234
Q ss_pred CCCCCCC--chhHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEecChHHHHHHHHHHhC----C------CceeEEEeCCC
Q 011049 311 EGDKLPN--DRFVEQLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHA----P------HLFCCGIARSG 377 (494)
Q Consensus 311 ~g~~~~~--~~~~~~~~~d~~~~v~~l~~~-~~~d~~ri~i~G~S~GG~~a~~~~~~~----p------~~~~a~v~~~~ 377 (494)
++..... ....+..++|+..+++.+.++ +.....++.|+|+||||..+..++.+- . =.+++++...|
T Consensus 135 ~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg 214 (462)
T PTZ00472 135 FSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNG 214 (462)
T ss_pred cccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecc
Confidence 4332211 122355678888888755543 334457899999999999887766541 0 13688888888
Q ss_pred CCC
Q 011049 378 SYN 380 (494)
Q Consensus 378 ~~~ 380 (494)
+.+
T Consensus 215 ~~d 217 (462)
T PTZ00472 215 LTD 217 (462)
T ss_pred ccC
Confidence 765
No 205
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=97.35 E-value=0.0094 Score=55.75 Aligned_cols=141 Identities=9% Similarity=0.028 Sum_probs=78.8
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
+..+.|+++|+ ++++...............|+|||+.++..... ...+++.++.++ +........ .
T Consensus 8 ~~d~~v~~~d~---~t~~~~~~~~~~~~~~~l~~~~dg~~l~~~~~~---~~~v~~~d~~~~--~~~~~~~~~-~----- 73 (300)
T TIGR03866 8 EKDNTISVIDT---ATLEVTRTFPVGQRPRGITLSKDGKLLYVCASD---SDTIQVIDLATG--EVIGTLPSG-P----- 73 (300)
T ss_pred cCCCEEEEEEC---CCCceEEEEECCCCCCceEECCCCCEEEEEECC---CCeEEEEECCCC--cEEEeccCC-C-----
Confidence 34568999998 666655544433334568899999876655322 457888888876 433322111 1
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
....+.|+|||+.++.... ... .+.++|+.+++.......... ....
T Consensus 74 -~~~~~~~~~~g~~l~~~~~------------------~~~--~l~~~d~~~~~~~~~~~~~~~------------~~~~ 120 (300)
T TIGR03866 74 -DPELFALHPNGKILYIANE------------------DDN--LVTVIDIETRKVLAEIPVGVE------------PEGM 120 (300)
T ss_pred -CccEEEECCCCCEEEEEcC------------------CCC--eEEEEECCCCeEEeEeeCCCC------------cceE
Confidence 1113348999987755431 111 388888877543221111100 0124
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
.++||+..+++.... ...++.++.++++
T Consensus 121 ~~~~dg~~l~~~~~~---~~~~~~~d~~~~~ 148 (300)
T TIGR03866 121 AVSPDGKIVVNTSET---TNMAHFIDTKTYE 148 (300)
T ss_pred EECCCCCEEEEEecC---CCeEEEEeCCCCe
Confidence 788888877664432 2234556665544
No 206
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.32 E-value=0.024 Score=50.84 Aligned_cols=225 Identities=16% Similarity=0.167 Sum_probs=125.8
Q ss_pred cEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCC-chhHHHHHhCCeEEEe
Q 011049 224 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT-PTSSLIFLARRFAVLA 302 (494)
Q Consensus 224 ~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~G~~v~~ 302 (494)
.++..+++..| .++..++--+. ++.|+|+-.|.-+....+ .|..+. ....+.+..+ |.|+.
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~------~~kpaiiTyhDlglN~~s----------cFq~ff~~p~m~ei~~~-fcv~H 83 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPK------GNKPAIITYHDLGLNHKS----------CFQGFFNFPDMAEILEH-FCVYH 83 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCC------CCCceEEEecccccchHh----------HhHHhhcCHhHHHHHhh-eEEEe
Confidence 44556666666 67777774332 236889999975533221 122222 1234455666 88887
Q ss_pred CCCCCCCCCCCC-CCCc---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 303 GPSIPIIGEGDK-LPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 303 ~~~~~~~g~g~~-~~~~---~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
++..|. ..|.. .+.. ...+++.+++..+++++ +. +-|.-+|--.|+++-..+|..||+++-+.|++++.
T Consensus 84 V~~PGq-e~gAp~~p~~y~yPsmd~LAd~l~~VL~~f---~l---k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 84 VDAPGQ-EDGAPSFPEGYPYPSMDDLADMLPEVLDHF---GL---KSVIGMGVGAGAYILARFALNHPERVLGLVLINCD 156 (326)
T ss_pred cCCCcc-ccCCccCCCCCCCCCHHHHHHHHHHHHHhc---Cc---ceEEEecccccHHHHHHHHhcChhheeEEEEEecC
Confidence 555322 11211 1111 12456667777776665 22 56888999999999999999999999999998875
Q ss_pred CCCCC-CCC-------------C-------------ccccc-cc--------------------ccccHHHHHhcCcccc
Q 011049 379 YNKTL-TPF-------------G-------------FQTEF-RT--------------------LWEATNVYIEMSPITH 410 (494)
Q Consensus 379 ~~~~~-~~~-------------~-------------~~~~~-~~--------------------~~~~~~~~~~~sp~~~ 410 (494)
..... ..| + |..+. +. .+...+.|.....+..
T Consensus 157 ~~a~gwiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~ 236 (326)
T KOG2931|consen 157 PCAKGWIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSI 236 (326)
T ss_pred CCCchHHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccc
Confidence 43110 000 0 00000 00 0000112222222111
Q ss_pred -cc----CCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHH
Q 011049 411 -AN----KIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 480 (494)
Q Consensus 411 -~~----~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~ 480 (494)
.. .+++|+|++.|.+-+. .+...++-.+|.. ..+.++...+.|--.. .+.+.+..+.+.=|+.
T Consensus 237 ~r~~~~~tlkc~vllvvGd~Sp~----~~~vv~~n~~Ldp--~~ttllk~~d~g~l~~-e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 237 ERPKLGTTLKCPVLLVVGDNSPH----VSAVVECNSKLDP--TYTTLLKMADCGGLVQ-EEQPGKLAEAFKYFLQ 304 (326)
T ss_pred cCCCcCccccccEEEEecCCCch----hhhhhhhhcccCc--ccceEEEEcccCCccc-ccCchHHHHHHHHHHc
Confidence 11 4569999999999987 4566677776654 3467777777766443 3344455544444443
No 207
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.21 E-value=0.12 Score=47.39 Aligned_cols=178 Identities=15% Similarity=0.070 Sum_probs=95.0
Q ss_pred ccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCcc
Q 011049 40 DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDE 119 (494)
Q Consensus 40 ~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~ 119 (494)
+.+-..++.+|+...+++.+.|- ..-.+++|..++. ....+...++..+| +.-+ +||||++++-+.+.-
T Consensus 4 P~RgH~~a~~p~~~~avafaRRP--G~~~~v~D~~~g~-~~~~~~a~~gRHFy---GHg~--fs~dG~~LytTEnd~--- 72 (305)
T PF07433_consen 4 PARGHGVAAHPTRPEAVAFARRP--GTFALVFDCRTGQ-LLQRLWAPPGRHFY---GHGV--FSPDGRLLYTTENDY--- 72 (305)
T ss_pred CccccceeeCCCCCeEEEEEeCC--CcEEEEEEcCCCc-eeeEEcCCCCCEEe---cCEE--EcCCCCEEEEecccc---
Confidence 34556788999555555444443 4678899998872 33345444444444 3444 899999776554321
Q ss_pred ceEEEEccCCCCCCCCCCceEeeecCCCceEEE--EeeCcchhhhheeeeccCCCcccccccCcEEEEEEecC-CC----
Q 011049 120 QIYILLNGRGFTPEGNIPFLDLFDINTGSKERI--WESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK-TE---- 192 (494)
Q Consensus 120 ~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l--~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~-~~---- 192 (494)
+..+-.|-++|+..+ .+++ |...|. + -.+..+.|||.++++-..+- +.
T Consensus 73 -------------~~g~G~IgVyd~~~~-~~ri~E~~s~GI----G-------PHel~l~pDG~tLvVANGGI~Thpd~G 127 (305)
T PF07433_consen 73 -------------ETGRGVIGVYDAARG-YRRIGEFPSHGI----G-------PHELLLMPDGETLVVANGGIETHPDSG 127 (305)
T ss_pred -------------CCCcEEEEEEECcCC-cEEEeEecCCCc----C-------hhhEEEcCCCCEEEEEcCCCccCcccC
Confidence 112224777887732 3332 333221 0 01235567776666543221 11
Q ss_pred ---------CCeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecC
Q 011049 193 ---------ITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYP 263 (494)
Q Consensus 193 ---------p~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hG 263 (494)
-|.|..+|..+++...--.++ +.......+.+.+. .||..+.+.-|..+.. ..|.+|.+|-
T Consensus 128 R~kLNl~tM~psL~~ld~~sG~ll~q~~Lp---~~~~~lSiRHLa~~-~~G~V~~a~Q~qg~~~------~~~PLva~~~ 197 (305)
T PF07433_consen 128 RAKLNLDTMQPSLVYLDARSGALLEQVELP---PDLHQLSIRHLAVD-GDGTVAFAMQYQGDPG------DAPPLVALHR 197 (305)
T ss_pred ceecChhhcCCceEEEecCCCceeeeeecC---ccccccceeeEEec-CCCcEEEEEecCCCCC------ccCCeEEEEc
Confidence 235666666666533222221 12233445666665 6788888888876532 1344566664
No 208
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.17 E-value=0.024 Score=50.06 Aligned_cols=154 Identities=20% Similarity=0.174 Sum_probs=84.5
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCC--cEEEEecChHHHHHHHHHHhC
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPS--RIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~--ri~i~G~S~GG~~a~~~~~~~ 365 (494)
.....|+++||+|++.++... . ...............+++.|.+++..++. .++=+|||+|.-+-+.+....
T Consensus 38 ~lLe~La~~Gy~ViAtPy~~t--f----DH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~ 111 (250)
T PF07082_consen 38 YLLERLADRGYAVIATPYVVT--F----DHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLF 111 (250)
T ss_pred HHHHHHHhCCcEEEEEecCCC--C----cHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhc
Confidence 455678899999999665321 1 11222334455566677778776544433 577899999999988877666
Q ss_pred CCceeEEEeCCCCCCC---CCCCC------Cccccc-ccccccHHHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHH
Q 011049 366 PHLFCCGIARSGSYNK---TLTPF------GFQTEF-RTLWEATNVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQ 435 (494)
Q Consensus 366 p~~~~a~v~~~~~~~~---~~~~~------~~~~~~-~~~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~ 435 (494)
+..-++-|.++ .-|. ...+. .+..+. .++-+......+.- .-..+|++-=.+|. .++
T Consensus 112 ~~~r~gniliS-FNN~~a~~aIP~~~~l~~~l~~EF~PsP~ET~~li~~~Y-------~~~rnLLIkF~~D~-----iDq 178 (250)
T PF07082_consen 112 DVERAGNILIS-FNNFPADEAIPLLEQLAPALRLEFTPSPEETRRLIRESY-------QVRRNLLIKFNDDD-----IDQ 178 (250)
T ss_pred cCcccceEEEe-cCChHHHhhCchHhhhccccccCccCCHHHHHHHHHHhc-------CCccceEEEecCCC-----ccc
Confidence 43323333332 1110 00010 000010 11111111111110 12346777777777 578
Q ss_pred HHHHHHHHHhCCC-cEEEEEcCCCCCc
Q 011049 436 AERFFDALKGHGA-LSRLVLLPFEHHV 461 (494)
Q Consensus 436 ~~~~~~~l~~~g~-~~~~~~~~~~~H~ 461 (494)
+..+.+.|+.+.. -++....+| .|.
T Consensus 179 t~~L~~~L~~r~~~~~~~~~L~G-~HL 204 (250)
T PF07082_consen 179 TDELEQILQQRFPDMVSIQTLPG-NHL 204 (250)
T ss_pred hHHHHHHHhhhccccceEEeCCC-CCC
Confidence 8899999987632 256677776 685
No 209
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.09 E-value=0.00045 Score=65.14 Aligned_cols=111 Identities=13% Similarity=0.023 Sum_probs=58.9
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHh---CCeEEEeCCCCCCCCCCCCCC-CchhHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA---RRFAVLAGPSIPIIGEGDKLP-NDRFVEQLVSSAEA 330 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~G~~v~~~~~~~~~g~g~~~~-~~~~~~~~~~d~~~ 330 (494)
.|++|++||.. +... -..+.......+.. +.+.|+.+|-.. +...... ...........+..
T Consensus 71 ~pt~iiiHGw~-----------~~~~-~~~~~~~~~~all~~~~~d~NVI~VDWs~--~a~~~Y~~a~~n~~~vg~~la~ 136 (331)
T PF00151_consen 71 KPTVIIIHGWT-----------GSGS-SESWIQDMIKALLQKDTGDYNVIVVDWSR--GASNNYPQAVANTRLVGRQLAK 136 (331)
T ss_dssp SEEEEEE--TT------------TT--TTTHHHHHHHHHHCC--S-EEEEEEE-HH--HHSS-HHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEcCcC-----------Cccc-chhHHHHHHHHHHhhccCCceEEEEcchh--hccccccchhhhHHHHHHHHHH
Confidence 79999999953 1110 00111112223333 589999855421 1110000 00112223445566
Q ss_pred HHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC--ceeEEEeCCCCC
Q 011049 331 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH--LFCCGIARSGSY 379 (494)
Q Consensus 331 ~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~--~~~a~v~~~~~~ 379 (494)
.+..|.+...++.++|.|+|||.||+++..+..+... ++..+.++.|..
T Consensus 137 ~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 137 FLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp HHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred HHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 6777875555889999999999999999999888766 678888877753
No 210
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=97.08 E-value=0.00097 Score=63.58 Aligned_cols=125 Identities=24% Similarity=0.238 Sum_probs=77.3
Q ss_pred EEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCC-eEEEeCCCC-CCCCC---
Q 011049 237 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLAGPSI-PIIGE--- 311 (494)
Q Consensus 237 ~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~~~~-~~~g~--- 311 (494)
+..-++.|. .++.+ .-++||++|||+-+++++-.+..+ ..|++.+ .+|+..+|| |..|+
T Consensus 121 LYlNVW~P~-~~p~n---~tVlVWiyGGGF~sGt~SLdvYdG------------k~la~~envIvVs~NYRvG~FGFL~l 184 (601)
T KOG4389|consen 121 LYLNVWAPA-ADPYN---LTVLVWIYGGGFYSGTPSLDVYDG------------KFLAAVENVIVVSMNYRVGAFGFLYL 184 (601)
T ss_pred eEEEEeccC-CCCCC---ceEEEEEEcCccccCCcceeeecc------------ceeeeeccEEEEEeeeeeccceEEec
Confidence 666677774 22333 349999999998777665443322 1345544 445555654 33332
Q ss_pred -CCCCCCchhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHHhC--CCceeEEEeCCCCCC
Q 011049 312 -GDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYN 380 (494)
Q Consensus 312 -g~~~~~~~~~~~~~~d~~~~v~~l~~~---~~~d~~ri~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~~ 380 (494)
|..+. -++...-|..-|++|+.++ ..-||+||.++|.|+|+.-+.+-+..- ..+|+-+|+.+|-.+
T Consensus 185 ~~~~ea---PGNmGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 185 PGHPEA---PGNMGLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred CCCCCC---CCccchHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCC
Confidence 22222 2334466777889999876 235899999999999986554322221 147888898888655
No 211
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.06 E-value=0.0022 Score=56.37 Aligned_cols=71 Identities=18% Similarity=0.239 Sum_probs=40.3
Q ss_pred hhHHHHHhCCeE---EEeCCCCCCCCCCCCCCCchh---HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHH
Q 011049 288 TSSLIFLARRFA---VLAGPSIPIIGEGDKLPNDRF---VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361 (494)
Q Consensus 288 ~~~~~l~~~G~~---v~~~~~~~~~g~g~~~~~~~~---~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~ 361 (494)
.....|.++||. |+..++ |.+........ ..+.+..+.+.|+.+++.- -. +|=|+|||+||.++-++
T Consensus 20 ~~~~~l~~~GY~~~~vya~ty----g~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~T--Ga-kVDIVgHS~G~~iaR~y 92 (219)
T PF01674_consen 20 TLAPYLKAAGYCDSEVYALTY----GSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYT--GA-KVDIVGHSMGGTIARYY 92 (219)
T ss_dssp HHHHHHHHTT--CCCEEEE------S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHH--T---EEEEEETCHHHHHHHH
T ss_pred HHHHHHHHcCCCcceeEeccC----CCCCCCCcccccccchhhHHHHHHHHHHHHHhh--CC-EEEEEEcCCcCHHHHHH
Confidence 456689999999 676444 21111001001 1123466777777776542 35 89999999999999988
Q ss_pred HHhC
Q 011049 362 LAHA 365 (494)
Q Consensus 362 ~~~~ 365 (494)
+...
T Consensus 93 i~~~ 96 (219)
T PF01674_consen 93 IKGG 96 (219)
T ss_dssp HHHC
T ss_pred HHHc
Confidence 7643
No 212
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=97.06 E-value=0.0058 Score=54.79 Aligned_cols=109 Identities=12% Similarity=0.150 Sum_probs=67.4
Q ss_pred ceeeeccCCCCCCCCCee--cc-ccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 18 DIIYTQPAEPAEGEKPEI--LH-KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~--lt-~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
+.|.|.|+...+.|--+. ++ ....+.....||||||.|+.++ ..+.++++|.=.| +.+.-+...... ...
T Consensus 162 ~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT----~~s~~~~lDAf~G--~~~~tfs~~~~~-~~~ 234 (311)
T KOG1446|consen 162 ELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLST----NASFIYLLDAFDG--TVKSTFSGYPNA-GNL 234 (311)
T ss_pred CeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEe----CCCcEEEEEccCC--cEeeeEeeccCC-CCc
Confidence 367777775554343332 22 1233445788999999999875 3567999998777 433333322211 111
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeC
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 156 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 156 (494)
|. ..+++|||++|+-.+. ++ +|.++++++|+....|..+
T Consensus 235 ~~--~a~ftPds~Fvl~gs~------------------dg---~i~vw~~~tg~~v~~~~~~ 273 (311)
T KOG1446|consen 235 PL--SATFTPDSKFVLSGSD------------------DG---TIHVWNLETGKKVAVLRGP 273 (311)
T ss_pred ce--eEEECCCCcEEEEecC------------------CC---cEEEEEcCCCcEeeEecCC
Confidence 22 2348999998876541 12 3888888999887777764
No 213
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=97.02 E-value=0.01 Score=54.35 Aligned_cols=96 Identities=17% Similarity=0.096 Sum_probs=53.7
Q ss_pred cccCCCCCCCCCccc-eeeeccCCCCCCCCCeecc-ccccccccceecCCCceEEEEeeeeccceEEEEEc-CCCCCCCc
Q 011049 4 AQDRGDANVEVSPRD-IIYTQPAEPAEGEKPEILH-KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC-PGSKDVAP 80 (494)
Q Consensus 4 ~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~lt-~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~-~~~g~~~~ 80 (494)
|.+.|+.=...++.+ .|-++|. +.+.-.+|. .+.+..+-..|||||.+|+-.+ -+. .-.+|-.. .-+. +.
T Consensus 203 wn~dgt~l~tAS~gsssi~iWdp---dtg~~~pL~~~glgg~slLkwSPdgd~lfaAt-~da-vfrlw~e~q~wt~--er 275 (445)
T KOG2139|consen 203 WNEDGTILVTASFGSSSIMIWDP---DTGQKIPLIPKGLGGFSLLKWSPDGDVLFAAT-CDA-VFRLWQENQSWTK--ER 275 (445)
T ss_pred EcCCCCEEeecccCcceEEEEcC---CCCCcccccccCCCceeeEEEcCCCCEEEEec-ccc-eeeeehhccccee--cc
Confidence 455566544444433 6677777 666666666 5666677889999999865433 222 23444211 1111 11
Q ss_pred eEeeecccccccCCCCCCceeeCCCCCEEEEEEec
Q 011049 81 RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 115 (494)
Q Consensus 81 ~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~ 115 (494)
-.+ .++.. .. -+|||+|++|+|....
T Consensus 276 w~l--gsgrv-----qt--acWspcGsfLLf~~sg 301 (445)
T KOG2139|consen 276 WIL--GSGRV-----QT--ACWSPCGSFLLFACSG 301 (445)
T ss_pred eec--cCCce-----ee--eeecCCCCEEEEEEcC
Confidence 111 11111 22 2499999999998753
No 214
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.01 E-value=0.024 Score=53.72 Aligned_cols=89 Identities=9% Similarity=-0.042 Sum_probs=49.9
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEee------eeccceEEEEEcCCCCCCCce-Eeeeccccc
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETW------YKTSQTRTWLVCPGSKDVAPR-VLFDRVFEN 90 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~------~~~~~~~~~~~~~~~g~~~~~-~lt~~~~~~ 90 (494)
++|+++|. +.++...-......-.. ..||||+.|+.... ++.+...|-++|+.+. +.. .|--.+...
T Consensus 27 ~~v~ViD~---~~~~v~g~i~~G~~P~~-~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~--~~~~~i~~p~~p~ 100 (352)
T TIGR02658 27 TQVYTIDG---EAGRVLGMTDGGFLPNP-VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTH--LPIADIELPEGPR 100 (352)
T ss_pred ceEEEEEC---CCCEEEEEEEccCCCce-eECCCCCEEEEEeccccccccCCCCCEEEEEECccC--cEEeEEccCCCch
Confidence 78999998 65554332222222233 59999999887664 2224568889998876 322 222211111
Q ss_pred ccCCCCCCceeeCCCCCEEEEE
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~ 112 (494)
+...+..-.+..||||+++++.
T Consensus 101 ~~~~~~~~~~~ls~dgk~l~V~ 122 (352)
T TIGR02658 101 FLVGTYPWMTSLTPDNKTLLFY 122 (352)
T ss_pred hhccCccceEEECCCCCEEEEe
Confidence 1111111133489999988764
No 215
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=96.97 E-value=0.0077 Score=55.98 Aligned_cols=126 Identities=14% Similarity=0.139 Sum_probs=74.6
Q ss_pred eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC--ceeeCCCCCEEEEE
Q 011049 35 ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP--MMTRTSTGTNVIAK 112 (494)
Q Consensus 35 ~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~--~~~~spDG~~i~~~ 112 (494)
.|+......=-..|||+||+||-.+...+ .-+|.+..++ ..+....-.+. ..| .+.||||.++++-.
T Consensus 219 il~~htdEVWfl~FS~nGkyLAsaSkD~T--aiiw~v~~d~---~~kl~~tlvgh------~~~V~yi~wSPDdryLlaC 287 (519)
T KOG0293|consen 219 ILQDHTDEVWFLQFSHNGKYLASASKDST--AIIWIVVYDV---HFKLKKTLVGH------SQPVSYIMWSPDDRYLLAC 287 (519)
T ss_pred hHhhCCCcEEEEEEcCCCeeEeeccCCce--EEEEEEecCc---ceeeeeeeecc------cCceEEEEECCCCCeEEec
Confidence 34444333335679999999997765433 5677777665 33333332222 122 23499999988765
Q ss_pred EeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCC
Q 011049 113 IKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTE 192 (494)
Q Consensus 113 ~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~ 192 (494)
.. +. -+.++|+.+|+....+...-. | + ..+..|-|||..++. .++.
T Consensus 288 g~------------------~e---~~~lwDv~tgd~~~~y~~~~~--~-------S-~~sc~W~pDg~~~V~--Gs~d- 333 (519)
T KOG0293|consen 288 GF------------------DE---VLSLWDVDTGDLRHLYPSGLG--F-------S-VSSCAWCPDGFRFVT--GSPD- 333 (519)
T ss_pred Cc------------------hH---heeeccCCcchhhhhcccCcC--C-------C-cceeEEccCCceeEe--cCCC-
Confidence 41 11 278889999887665543300 0 1 123578899977553 3333
Q ss_pred CCeEEEEEcCCCce
Q 011049 193 ITQYHILSWPLKKS 206 (494)
Q Consensus 193 p~~l~~~~~~~~~~ 206 (494)
..++..++++...
T Consensus 334 -r~i~~wdlDgn~~ 346 (519)
T KOG0293|consen 334 -RTIIMWDLDGNIL 346 (519)
T ss_pred -CcEEEecCCcchh
Confidence 5678888776543
No 216
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.90 E-value=0.0062 Score=60.28 Aligned_cols=148 Identities=10% Similarity=-0.024 Sum_probs=74.5
Q ss_pred EEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCC----CchhHHHHHhCCeEEEeC
Q 011049 228 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM----TPTSSLIFLARRFAVLAG 303 (494)
Q Consensus 228 ~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~G~~v~~~ 303 (494)
.+....+..+..|++...+ ++.. .|+|+|+.|||.++.-.....--+|-....- .......|... ..++.+
T Consensus 17 ~~~~~~~~~lfyw~~~s~~-~~~~---~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~i 91 (415)
T PF00450_consen 17 PVNDNENAHLFYWFFESRN-DPED---DPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFI 91 (415)
T ss_dssp EECTTTTEEEEEEEEE-SS-GGCS---S-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE
T ss_pred ecCCCCCcEEEEEEEEeCC-CCCC---ccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEE
Confidence 3333456788888887665 3332 7999999999854421110000111111100 00111122333 333333
Q ss_pred CCCCCCCCCCCCCCch---hHHHHHHHHHHHHH-HHHHcCCCCCCcEEEEecChHHHHHHHHHH----hC------CCce
Q 011049 304 PSIPIIGEGDKLPNDR---FVEQLVSSAEAAVE-EVVRRGVADPSRIAVGGHSYGAFMTAHLLA----HA------PHLF 369 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~~---~~~~~~~d~~~~v~-~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~----~~------p~~~ 369 (494)
|..-..|+........ ..++..+|+..++. ++.+.+.....++.|+|.||||..+..+|. .. +=.+
T Consensus 92 D~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 92 DQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp --STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred eecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 4322345443322222 23556777777775 444445555668999999999987655543 33 2247
Q ss_pred eEEEeCCCCCC
Q 011049 370 CCGIARSGSYN 380 (494)
Q Consensus 370 ~a~v~~~~~~~ 380 (494)
++++...|+++
T Consensus 172 kGi~IGng~~d 182 (415)
T PF00450_consen 172 KGIAIGNGWID 182 (415)
T ss_dssp EEEEEESE-SB
T ss_pred ccceecCcccc
Confidence 89999888865
No 217
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.88 E-value=0.0059 Score=54.84 Aligned_cols=78 Identities=18% Similarity=0.192 Sum_probs=44.1
Q ss_pred HHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC---CCc
Q 011049 292 IFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHL 368 (494)
Q Consensus 292 ~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~---p~~ 368 (494)
.+...++.|+.... .|.+.........++++.+..+.| .+.. ...++.++|||+||.+|..+|.+- ...
T Consensus 22 ~l~~~~~~v~~i~~---~~~~~~~~~~~si~~la~~y~~~I---~~~~--~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~ 93 (229)
T PF00975_consen 22 ALPDDVIGVYGIEY---PGRGDDEPPPDSIEELASRYAEAI---RARQ--PEGPYVLAGWSFGGILAFEMARQLEEAGEE 93 (229)
T ss_dssp HHTTTEEEEEEECS---TTSCTTSHEESSHHHHHHHHHHHH---HHHT--SSSSEEEEEETHHHHHHHHHHHHHHHTT-S
T ss_pred hCCCCeEEEEEEec---CCCCCCCCCCCCHHHHHHHHHHHh---hhhC--CCCCeeehccCccHHHHHHHHHHHHHhhhc
Confidence 33333466766333 233222223333455665554444 3332 123899999999999999887643 234
Q ss_pred eeEEEeCCC
Q 011049 369 FCCGIARSG 377 (494)
Q Consensus 369 ~~a~v~~~~ 377 (494)
+..++++.+
T Consensus 94 v~~l~liD~ 102 (229)
T PF00975_consen 94 VSRLILIDS 102 (229)
T ss_dssp ESEEEEESC
T ss_pred cCceEEecC
Confidence 666776664
No 218
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=96.79 E-value=0.022 Score=55.15 Aligned_cols=128 Identities=13% Similarity=0.146 Sum_probs=77.5
Q ss_pred CCccc--eeeeccCCCCCCCCCe-eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 14 VSPRD--IIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 14 ~~~~~--~i~~~~~~~~~~~~~~-~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
.+|.| .||+++. +|...+ .|+ .++-.+..+|||+|+.++.+.-. ....+-+.++++. .+++...
T Consensus 245 ~SYYGEq~Lyll~t---~g~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGf--MPAkvtifnlr~~-----~v~df~e-- 311 (566)
T KOG2315|consen 245 ASYYGEQTLYLLAT---QGESVSVPLL-KEGPVHDVTWSPSGREFAVVYGF--MPAKVTIFNLRGK-----PVFDFPE-- 311 (566)
T ss_pred ccccccceEEEEEe---cCceEEEecC-CCCCceEEEECCCCCEEEEEEec--ccceEEEEcCCCC-----EeEeCCC--
Confidence 46666 8999998 644433 344 33456788999999998876532 4567778887653 4544332
Q ss_pred ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccC
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFG 170 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~ 170 (494)
+|.+-++ |||-|..|++..-+ ...++ +-++|+.+. +.+...... .
T Consensus 312 ---gpRN~~~-fnp~g~ii~lAGFG---------------NL~G~---mEvwDv~n~--K~i~~~~a~-----------~ 356 (566)
T KOG2315|consen 312 ---GPRNTAF-FNPHGNIILLAGFG---------------NLPGD---MEVWDVPNR--KLIAKFKAA-----------N 356 (566)
T ss_pred ---CCccceE-ECCCCCEEEEeecC---------------CCCCc---eEEEeccch--hhccccccC-----------C
Confidence 2344444 99999977776421 12233 778888773 333322211 1
Q ss_pred CCcccccccCcEEEEEEec
Q 011049 171 QGEEDINLNQLKILTSKES 189 (494)
Q Consensus 171 ~~~~~~s~d~~~~~~~~~s 189 (494)
..-.+|+|||..++....+
T Consensus 357 tt~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 357 TTVFEWSPDGEYFLTATTA 375 (566)
T ss_pred ceEEEEcCCCcEEEEEecc
Confidence 1124899999887765444
No 219
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.71 E-value=0.015 Score=49.37 Aligned_cols=111 Identities=16% Similarity=0.103 Sum_probs=55.8
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCcc-CCCCchhHHHHHhCCeEEEeCCCCCCCCCCCC-CCCchhHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEF-SGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK-LPNDRFVEQLVSSAEAAV 332 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~-~~~~~~~~~~~~d~~~~v 332 (494)
..++|++||.|.-..+.+..-.=-.+.. .+..-.+...-.+.||.|+..+.-..+-.-++ .....+....++-+.-..
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 5689999997642211110000000000 11111223344568999887333111111111 111222222233333333
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 367 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~ 367 (494)
.+++.. ..+..++++.|||||++++.++.+.|+
T Consensus 181 ~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~~ 213 (297)
T KOG3967|consen 181 KNIVLP--AKAESVFVVAHSYGGSLTLDLVERFPD 213 (297)
T ss_pred HHHhcc--cCcceEEEEEeccCChhHHHHHHhcCC
Confidence 444332 356889999999999999999999985
No 220
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.64 E-value=0.0049 Score=47.28 Aligned_cols=60 Identities=28% Similarity=0.227 Sum_probs=47.0
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHH
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 481 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~ 481 (494)
..|+|++.++.|+..| +..++.+.+.|.. .++++.++.||+... ....-..+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP--~~~a~~~~~~l~~----s~lvt~~g~gHg~~~-~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTP--YEGARAMAARLPG----SRLVTVDGAGHGVYA-GGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCc--HHHHHHHHHHCCC----ceEEEEeccCcceec-CCChHHHHHHHHHHHc
Confidence 4899999999999987 9999999888865 489999999999763 2223455566677663
No 221
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.63 E-value=0.028 Score=56.08 Aligned_cols=131 Identities=17% Similarity=0.183 Sum_probs=81.4
Q ss_pred cCCCc--eEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhCCeEEEeCCCCCC
Q 011049 231 RKDGV--PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 308 (494)
Q Consensus 231 ~~dg~--~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 308 (494)
..++. .|...+++|.+++ + + ++.+-|||+... +. .-.... ....-+++||+++.-|. |.
T Consensus 9 ~~~~~~~~i~fev~LP~~WN-g-R-----~~~~GgGG~~G~-----i~----~~~~~~--~~~~~~~~G~A~~~TD~-Gh 69 (474)
T PF07519_consen 9 PSDGSAPNIRFEVWLPDNWN-G-R-----FLQVGGGGFAGG-----IN----YADGKA--SMATALARGYATASTDS-GH 69 (474)
T ss_pred cCCCCcceEEEEEECChhhc-c-C-----eEEECCCeeeCc-----cc----cccccc--ccchhhhcCeEEEEecC-CC
Confidence 34444 8899999999653 1 2 555555554221 11 000000 01234789999998443 33
Q ss_pred CCCCC----CCCC-----chhHHHHHHHHHHHHHHHHHcCC-CCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 309 IGEGD----KLPN-----DRFVEQLVSSAEAAVEEVVRRGV-ADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 309 ~g~g~----~~~~-----~~~~~~~~~d~~~~v~~l~~~~~-~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
.+... ++.. .+|....+.+...+-+.|++..+ ..+++-...|.|-||-.++.+|-++|+.|.++++.+|.
T Consensus 70 ~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA 149 (474)
T PF07519_consen 70 QGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPA 149 (474)
T ss_pred CCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCch
Confidence 22211 1111 12233335555556666766533 56789999999999999999999999999999999997
Q ss_pred CC
Q 011049 379 YN 380 (494)
Q Consensus 379 ~~ 380 (494)
.+
T Consensus 150 ~~ 151 (474)
T PF07519_consen 150 IN 151 (474)
T ss_pred HH
Confidence 54
No 222
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=96.54 E-value=0.44 Score=43.15 Aligned_cols=171 Identities=10% Similarity=0.018 Sum_probs=85.1
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc--ccC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN--VYS 93 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~--~~~ 93 (494)
....|.+||+ ...+.+-+..... -.-+++.|+|- +|..--++ ..|.+.|+..=+..|-+.+.-...+ .+
T Consensus 120 ~D~tvrLWDl---R~~~cqg~l~~~~-~pi~AfDp~GL--ifA~~~~~--~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew- 190 (311)
T KOG1446|consen 120 LDKTVRLWDL---RVKKCQGLLNLSG-RPIAAFDPEGL--IFALANGS--ELIKLYDLRSFDKGPFTTFSITDNDEAEW- 190 (311)
T ss_pred cCCeEEeeEe---cCCCCceEEecCC-CcceeECCCCc--EEEEecCC--CeEEEEEecccCCCCceeEccCCCCccce-
Confidence 3347888888 4344444433322 22357989884 44433222 2566666542111333322221111 11
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEee-CcchhhhheeeeccCCC
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES-NREKYFETAVALVFGQG 172 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~-~~~~~~~~~~~~~s~~~ 172 (494)
. .+.+|||||.|+...+. ..++++|.=.|....-... ... . ....
T Consensus 191 --~--~l~FS~dGK~iLlsT~~---------------------s~~~~lDAf~G~~~~tfs~~~~~----~-----~~~~ 236 (311)
T KOG1446|consen 191 --T--DLEFSPDGKSILLSTNA---------------------SFIYLLDAFDGTVKSTFSGYPNA----G-----NLPL 236 (311)
T ss_pred --e--eeEEcCCCCEEEEEeCC---------------------CcEEEEEccCCcEeeeEeeccCC----C-----Ccce
Confidence 1 12389999999987631 1377888777764332221 111 0 0012
Q ss_pred cccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecC-CCCCCcccccccEEEEEEcCC
Q 011049 173 EEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNF-PHPYPTLASLQKEMIKYQRKD 233 (494)
Q Consensus 173 ~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~-~~~~~~~~~~~~~~~~~~~~d 233 (494)
++.++||++.++. .+. -..|.+++++++.......- +..........++...+.+.+
T Consensus 237 ~a~ftPds~Fvl~-gs~---dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~ 294 (311)
T KOG1446|consen 237 SATFTPDSKFVLS-GSD---DGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSAS 294 (311)
T ss_pred eEEECCCCcEEEE-ecC---CCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecC
Confidence 5689999975543 322 35677888877765433332 111111122345555666554
No 223
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.53 E-value=0.042 Score=53.13 Aligned_cols=134 Identities=16% Similarity=0.177 Sum_probs=86.5
Q ss_pred EEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH-hCCeEEEeCCCCC
Q 011049 229 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIP 307 (494)
Q Consensus 229 ~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~ 307 (494)
|.+..+...+=+.|.+..+.... -|+.+++-|-+..+ ..|..........+| +.|-.|+....|
T Consensus 63 F~~~~~~~~Qq~~y~n~~~~~~~---gPiFLmIGGEgp~~-----------~~wv~~~~~~~~~~AkkfgA~v~~lEHR- 127 (514)
T KOG2182|consen 63 FDSSNGKFFQQRFYNNNQWAKPG---GPIFLMIGGEGPES-----------DKWVGNENLTWLQWAKKFGATVFQLEHR- 127 (514)
T ss_pred hhcchhhhhhhheeeccccccCC---CceEEEEcCCCCCC-----------CCccccCcchHHHHHHHhCCeeEEeeee-
Confidence 34445555556666676664322 58888886643211 123332322333444 478888873332
Q ss_pred CCCCCCCCC-------Cchh--HHHHHHHHHHHHHHHHHcC-CCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCC
Q 011049 308 IIGEGDKLP-------NDRF--VEQLVSSAEAAVEEVVRRG-VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 377 (494)
Q Consensus 308 ~~g~g~~~~-------~~~~--~~~~~~d~~~~v~~l~~~~-~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 377 (494)
=||.+.+ +-++ ..+...|+...|+.+-.+. .-|+.+.+.+|.||-|.+++|+-..+|+++.++|+-++
T Consensus 128 --FYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSa 205 (514)
T KOG2182|consen 128 --FYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSA 205 (514)
T ss_pred --ccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccc
Confidence 3443321 1122 4567889999998887664 45556999999999999999999999999999998877
Q ss_pred CC
Q 011049 378 SY 379 (494)
Q Consensus 378 ~~ 379 (494)
..
T Consensus 206 pv 207 (514)
T KOG2182|consen 206 PV 207 (514)
T ss_pred ce
Confidence 64
No 224
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=96.52 E-value=0.0031 Score=38.54 Aligned_cols=28 Identities=18% Similarity=0.312 Sum_probs=19.7
Q ss_pred eEeeecccccccCCCCCCceeeCCCCCEEEEEEec
Q 011049 81 RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 115 (494)
Q Consensus 81 ~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~ 115 (494)
+++|...+.+ ..|. |||||++|+|.+..
T Consensus 2 ~~~t~~~~~~-----~~p~--~SpDGk~i~f~s~~ 29 (39)
T PF07676_consen 2 KQLTNSPGDD-----GSPA--WSPDGKYIYFTSNR 29 (39)
T ss_dssp EEES-SSSSE-----EEEE--E-TTSSEEEEEEEC
T ss_pred cCcccCCccc-----cCEE--EecCCCEEEEEecC
Confidence 5667766655 4566 99999999999864
No 225
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=96.51 E-value=0.036 Score=51.72 Aligned_cols=118 Identities=12% Similarity=0.152 Sum_probs=67.0
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceE
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 122 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~ 122 (494)
.....||||.++++-... ...+++-|+++| +.+.++... ..+ .....+|.|||.+++..+
T Consensus 272 V~yi~wSPDdryLlaCg~----~e~~~lwDv~tg--d~~~~y~~~-~~~----S~~sc~W~pDg~~~V~Gs--------- 331 (519)
T KOG0293|consen 272 VSYIMWSPDDRYLLACGF----DEVLSLWDVDTG--DLRHLYPSG-LGF----SVSSCAWCPDGFRFVTGS--------- 331 (519)
T ss_pred eEEEEECCCCCeEEecCc----hHheeeccCCcc--hhhhhcccC-cCC----CcceeEEccCCceeEecC---------
Confidence 345679999999875532 233777788887 656655443 111 222334999999876543
Q ss_pred EEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 123 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 123 ~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
++ .+++.+|+++.. ..-|..-.. ..+ ....+++||.+++.... -+.+..++.+
T Consensus 332 ---------~d---r~i~~wdlDgn~-~~~W~gvr~------~~v----~dlait~Dgk~vl~v~~----d~~i~l~~~e 384 (519)
T KOG0293|consen 332 ---------PD---RTIIMWDLDGNI-LGNWEGVRD------PKV----HDLAITYDGKYVLLVTV----DKKIRLYNRE 384 (519)
T ss_pred ---------CC---CcEEEecCCcch-hhccccccc------cee----EEEEEcCCCcEEEEEec----ccceeeechh
Confidence 12 247778877643 223443211 001 12367788888877653 2456666655
Q ss_pred CCcee
Q 011049 203 LKKSS 207 (494)
Q Consensus 203 ~~~~~ 207 (494)
+...+
T Consensus 385 ~~~dr 389 (519)
T KOG0293|consen 385 ARVDR 389 (519)
T ss_pred hhhhh
Confidence 44333
No 226
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.47 E-value=0.2 Score=46.77 Aligned_cols=52 Identities=17% Similarity=0.122 Sum_probs=34.5
Q ss_pred ccceeeeccCCCCCCCCCeecccccc-ccccceecCCCceEEEEeeeeccceEEEEEcCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDL-RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 74 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~-~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~ 74 (494)
.-|.||.++. . +..+++..... .-.+.+|||||+.++|+- +...+||+++++
T Consensus 141 ~~G~lyr~~p---~-g~~~~l~~~~~~~~NGla~SpDg~tly~aD---T~~~~i~r~~~d 193 (307)
T COG3386 141 PTGSLYRVDP---D-GGVVRLLDDDLTIPNGLAFSPDGKTLYVAD---TPANRIHRYDLD 193 (307)
T ss_pred CcceEEEEcC---C-CCEEEeecCcEEecCceEECCCCCEEEEEe---CCCCeEEEEecC
Confidence 3347888875 4 44455544433 344789999999877753 335689999876
No 227
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.44 E-value=0.0037 Score=58.49 Aligned_cols=56 Identities=25% Similarity=0.305 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCC
Q 011049 321 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS 376 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~ 376 (494)
.++...|....+.+|++........|.++|.||||++++|+-.++|+.+.++++.+
T Consensus 144 seQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaS 199 (492)
T KOG2183|consen 144 SEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAAS 199 (492)
T ss_pred HHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhcc
Confidence 45778899999999988765667889999999999999999999999888777654
No 228
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=96.41 E-value=0.078 Score=50.92 Aligned_cols=131 Identities=8% Similarity=0.037 Sum_probs=64.5
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccc-cccCCCCCC-ceeeCCCCCEEEEEEeccCccceE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE-NVYSDPGSP-MMTRTSTGTNVIAKIKKENDEQIY 122 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~-~~~~~~~~~-~~~~spDG~~i~~~~~~~~~~~~~ 122 (494)
..+|+|||+.++.+... .+.|.+++++...+..+.+...... ..+.....+ -+..||||++|+.....
T Consensus 196 h~~f~pdg~~~Yv~~e~---s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~------- 265 (345)
T PF10282_consen 196 HLAFSPDGKYAYVVNEL---SNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRG------- 265 (345)
T ss_dssp EEEE-TTSSEEEEEETT---TTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECT-------
T ss_pred EEEEcCCcCEEEEecCC---CCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEecc-------
Confidence 35699999986665433 3456666655222243433322211 011100011 23479999988765421
Q ss_pred EEEccCCCCCCCCCCceEeeec--CCCceEEEEeeC--cchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEE
Q 011049 123 ILLNGRGFTPEGNIPFLDLFDI--NTGSKERIWESN--REKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHI 198 (494)
Q Consensus 123 ~~~~~~g~~~~~~~~~l~~~d~--~~g~~~~l~~~~--~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~ 198 (494)
.+ .|.++++ ++|+.+.+-... +. .+ ....++|||+.+++..+..+ .-.+|.
T Consensus 266 -----------~~--sI~vf~~d~~~g~l~~~~~~~~~G~----~P-------r~~~~s~~g~~l~Va~~~s~-~v~vf~ 320 (345)
T PF10282_consen 266 -----------SN--SISVFDLDPATGTLTLVQTVPTGGK----FP-------RHFAFSPDGRYLYVANQDSN-TVSVFD 320 (345)
T ss_dssp -----------TT--EEEEEEECTTTTTEEEEEEEEESSS----SE-------EEEEE-TTSSEEEEEETTTT-EEEEEE
T ss_pred -----------CC--EEEEEEEecCCCceEEEEEEeCCCC----Cc-------cEEEEeCCCCEEEEEecCCC-eEEEEE
Confidence 11 2444444 556665543221 11 01 12377899988887655432 235667
Q ss_pred EEcCCCceeEee
Q 011049 199 LSWPLKKSSQIT 210 (494)
Q Consensus 199 ~~~~~~~~~~lt 210 (494)
++.+++......
T Consensus 321 ~d~~tG~l~~~~ 332 (345)
T PF10282_consen 321 IDPDTGKLTPVG 332 (345)
T ss_dssp EETTTTEEEEEE
T ss_pred EeCCCCcEEEec
Confidence 777777766554
No 229
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=96.26 E-value=0.026 Score=53.39 Aligned_cols=117 Identities=14% Similarity=0.102 Sum_probs=78.0
Q ss_pred ccCCC-CCCCCCccceeeeccCCCCCCCCCeecccccc----ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCC
Q 011049 5 QDRGD-ANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL----RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVA 79 (494)
Q Consensus 5 ~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~lt~~~~----~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~ 79 (494)
.+.|+ -.+..+.|--+|.+|+ +.++..++....+ ....+..||||+.|++. +.++-|+++...++
T Consensus 266 ~p~G~~~i~~s~rrky~ysyDl---e~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~----G~~G~I~lLhakT~--- 335 (514)
T KOG2055|consen 266 APNGHSVIFTSGRRKYLYSYDL---ETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIA----GNNGHIHLLHAKTK--- 335 (514)
T ss_pred cCCCceEEEecccceEEEEeec---cccccccccCCCCcccchhheeEecCCCCeEEEc----ccCceEEeehhhhh---
Confidence 45666 3566777888999999 7666666544332 22356789999988885 34677888887765
Q ss_pred ceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcc
Q 011049 80 PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNRE 158 (494)
Q Consensus 80 ~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 158 (494)
..++...-.. .-..++||.||+.|+.... .+ ++|++|+........|.++|.
T Consensus 336 -eli~s~KieG-----~v~~~~fsSdsk~l~~~~~------------------~G---eV~v~nl~~~~~~~rf~D~G~ 387 (514)
T KOG2055|consen 336 -ELITSFKIEG-----VVSDFTFSSDSKELLASGG------------------TG---EVYVWNLRQNSCLHRFVDDGS 387 (514)
T ss_pred -hhhheeeecc-----EEeeEEEecCCcEEEEEcC------------------Cc---eEEEEecCCcceEEEEeecCc
Confidence 3444433221 1112348999987665431 12 499999999888889998876
No 230
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=96.21 E-value=0.15 Score=49.24 Aligned_cols=100 Identities=8% Similarity=-0.031 Sum_probs=53.8
Q ss_pred ccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
-.+.|.++|. +..+... +..+........+||||++++.. .+ ...|-++|+.... ..+.+-....
T Consensus 14 ~~~~v~viD~---~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~-~r---dg~vsviD~~~~~-~v~~i~~G~~------ 79 (369)
T PF02239_consen 14 GSGSVAVIDG---ATNKVVARIPTGGAPHAGLKFSPDGRYLYVA-NR---DGTVSVIDLATGK-VVATIKVGGN------ 79 (369)
T ss_dssp GGTEEEEEET---TT-SEEEEEE-STTEEEEEE-TT-SSEEEEE-ET---TSEEEEEETTSSS-EEEEEE-SSE------
T ss_pred CCCEEEEEEC---CCCeEEEEEcCCCCceeEEEecCCCCEEEEE-cC---CCeEEEEECCccc-EEEEEecCCC------
Confidence 3568999988 6555443 22222234567899999986654 33 3579999998762 1122221111
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEE
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKER 151 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~ 151 (494)
|.. +..||||++++..... ...+.++|.++.+..+
T Consensus 80 ~~~--i~~s~DG~~~~v~n~~--------------------~~~v~v~D~~tle~v~ 114 (369)
T PF02239_consen 80 PRG--IAVSPDGKYVYVANYE--------------------PGTVSVIDAETLEPVK 114 (369)
T ss_dssp EEE--EEE--TTTEEEEEEEE--------------------TTEEEEEETTT--EEE
T ss_pred cce--EEEcCCCCEEEEEecC--------------------CCceeEecccccccee
Confidence 112 2379999988765421 1148888988876544
No 231
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=96.16 E-value=0.25 Score=44.83 Aligned_cols=86 Identities=16% Similarity=0.055 Sum_probs=48.3
Q ss_pred CCccceeeeccCCCCCCCCCeecccc------ccccccceecCCCceEEEEeeeec---cc--eEEEEEcCCCCCCCceE
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKL------DLRFRSVSWCDDSLALVNETWYKT---SQ--TRTWLVCPGSKDVAPRV 82 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~------~~~~~~p~wspDg~~i~f~~~~~~---~~--~~~~~~~~~~g~~~~~~ 82 (494)
++..+.+.++|. ++++.+.+... .......++.|||+ |+|+..... .. ..+|+++.+ + +.+.
T Consensus 56 v~~~~~~~~~d~---~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~--~~~~ 128 (246)
T PF08450_consen 56 VADSGGIAVVDP---DTGKVTVLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-G--KVTV 128 (246)
T ss_dssp EEETTCEEEEET---TTTEEEEEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-S--EEEE
T ss_pred EEEcCceEEEec---CCCcEEEEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-C--eEEE
Confidence 334445555566 55665555443 12333568999998 676654221 12 689999998 4 4455
Q ss_pred eeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 83 LFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 83 lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
+..... .|+. ++|||||+.+++..
T Consensus 129 ~~~~~~-----~pNG--i~~s~dg~~lyv~d 152 (246)
T PF08450_consen 129 VADGLG-----FPNG--IAFSPDGKTLYVAD 152 (246)
T ss_dssp EEEEES-----SEEE--EEEETTSSEEEEEE
T ss_pred EecCcc-----cccc--eEECCcchheeecc
Confidence 443221 1122 33999999887764
No 232
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.99 E-value=0.046 Score=50.80 Aligned_cols=58 Identities=16% Similarity=0.126 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC--------CCceeEEEeCCCCCC
Q 011049 321 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA--------PHLFCCGIARSGSYN 380 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~--------p~~~~a~v~~~~~~~ 380 (494)
.+....++...+++|.+... ..+|.|++||||.++++.++-+- +.+|+-+|..+|=.|
T Consensus 170 ~~~Sr~aLe~~lr~La~~~~--~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 170 TNYSRPALERLLRYLATDKP--VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred hhhhHHHHHHHHHHHHhCCC--CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 34556788889999988764 37899999999999998876432 235677777777544
No 233
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=95.98 E-value=0.075 Score=48.88 Aligned_cols=99 Identities=13% Similarity=0.149 Sum_probs=51.9
Q ss_pred cccccCCCCCCCCCccceeeeccCCCCCC--CCC--------eecccc--ccccccceecCCCceEEEEeeeeccceEEE
Q 011049 2 VEAQDRGDANVEVSPRDIIYTQPAEPAEG--EKP--------EILHKL--DLRFRSVSWCDDSLALVNETWYKTSQTRTW 69 (494)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~--------~~lt~~--~~~~~~p~wspDg~~i~f~~~~~~~~~~~~ 69 (494)
++|++.+.-.+-+.-|+=|-++.+++ .. +++ -++.+. .....+.+|-+||..++-.+..+ ..+-
T Consensus 146 lawRPlsaselavgCr~gIciW~~s~-tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gs---ssi~ 221 (445)
T KOG2139|consen 146 LAWRPLSASELAVGCRAGICIWSDSR-TLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGS---SSIM 221 (445)
T ss_pred EEeccCCcceeeeeecceeEEEEcCc-ccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCc---ceEE
Confidence 35666665555565565555555421 11 111 122222 23445778999998777554322 3444
Q ss_pred EEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEE
Q 011049 70 LVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 70 ~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~ 112 (494)
+-++++| ....|...... +--++.|||||.++.-.
T Consensus 222 iWdpdtg--~~~pL~~~glg------g~slLkwSPdgd~lfaA 256 (445)
T KOG2139|consen 222 IWDPDTG--QKIPLIPKGLG------GFSLLKWSPDGDVLFAA 256 (445)
T ss_pred EEcCCCC--CcccccccCCC------ceeeEEEcCCCCEEEEe
Confidence 4455555 44444422211 22256699999977544
No 234
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=95.92 E-value=0.096 Score=49.70 Aligned_cols=107 Identities=12% Similarity=0.102 Sum_probs=60.0
Q ss_pred CCccceeeeccCCCCCCCCCeec------ccc----ccccc---cceecCCCceEEEEee-e-----eccceEEEEEcCC
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEIL------HKL----DLRFR---SVSWCDDSLALVNETW-Y-----KTSQTRTWLVCPG 74 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~l------t~~----~~~~~---~p~wspDg~~i~f~~~-~-----~~~~~~~~~~~~~ 74 (494)
+++.|.|+++|+ .+..+..+ +.. .++-. ..+++|||+.++.... + ....++||++|+.
T Consensus 211 vs~eG~V~~id~---~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~ 287 (352)
T TIGR02658 211 PTYTGKIFQIDL---SSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAK 287 (352)
T ss_pred EecCCeEEEEec---CCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECC
Confidence 455599999997 33332222 111 11222 2678999998776442 1 1124699999998
Q ss_pred CCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEE
Q 011049 75 SKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKER 151 (494)
Q Consensus 75 ~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~ 151 (494)
++ +++..-.... .+- -+..||||+-++|..+. ..+ .+.++|..+++..+
T Consensus 288 t~----kvi~~i~vG~---~~~--~iavS~Dgkp~lyvtn~----------------~s~---~VsViD~~t~k~i~ 336 (352)
T TIGR02658 288 TG----KRLRKIELGH---EID--SINVSQDAKPLLYALST----------------GDK---TLYIFDAETGKELS 336 (352)
T ss_pred CC----eEEEEEeCCC---cee--eEEECCCCCeEEEEeCC----------------CCC---cEEEEECcCCeEEe
Confidence 76 3333222111 011 12379999966666532 012 28899998886543
No 235
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=95.91 E-value=0.027 Score=52.01 Aligned_cols=78 Identities=9% Similarity=0.119 Sum_probs=47.0
Q ss_pred eeeeccCCCCCCCC-CeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 19 IIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 19 ~i~~~~~~~~~~~~-~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.+|+++- .+..+ .++.|..........|||||++|+-.+..+. -++|-. .+| +.|...-+.. .
T Consensus 347 tlflW~p--~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkS--VkLW~g--~tG----k~lasfRGHv------~ 410 (480)
T KOG0271|consen 347 TLFLWNP--FKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKS--VKLWDG--RTG----KFLASFRGHV------A 410 (480)
T ss_pred eEEEecc--cccccchhhhhchhhheeeEEECCCccEEEEeecccc--eeeeeC--CCc----chhhhhhhcc------c
Confidence 7888864 23332 3367777777778899999999997764332 455544 333 4444433332 2
Q ss_pred Cc--eeeCCCCCEEEEE
Q 011049 98 PM--MTRTSTGTNVIAK 112 (494)
Q Consensus 98 ~~--~~~spDG~~i~~~ 112 (494)
++ +.||.|.+-|+-.
T Consensus 411 ~VYqvawsaDsRLlVS~ 427 (480)
T KOG0271|consen 411 AVYQVAWSADSRLLVSG 427 (480)
T ss_pred eeEEEEeccCccEEEEc
Confidence 22 2399998755543
No 236
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=95.88 E-value=1.3 Score=40.25 Aligned_cols=86 Identities=15% Similarity=0.140 Sum_probs=44.0
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
.+..||+... + +..+.+..+. ....|+|++||...++.. ......+++-+.++. .....+ +.....
T Consensus 46 ~~~~L~~~~~---~-~~~~~~~~g~-~l~~PS~d~~g~~W~v~~--~~~~~~~~~~~~~g~-~~~~~v-~~~~~~----- 111 (253)
T PF10647_consen 46 GGRSLYVGPA---G-GPVRPVLTGG-SLTRPSWDPDGWVWTVDD--GSGGVRVVRDSASGT-GEPVEV-DWPGLR----- 111 (253)
T ss_pred CCCEEEEEcC---C-CcceeeccCC-ccccccccCCCCEEEEEc--CCCceEEEEecCCCc-ceeEEe-cccccC-----
Confidence 3456777665 3 4444443333 678999999976444432 221233333222322 122222 221110
Q ss_pred CCC-ceeeCCCCCEEEEEEec
Q 011049 96 GSP-MMTRTSTGTNVIAKIKK 115 (494)
Q Consensus 96 ~~~-~~~~spDG~~i~~~~~~ 115 (494)
+.. .+.+||||+++++....
T Consensus 112 ~~I~~l~vSpDG~RvA~v~~~ 132 (253)
T PF10647_consen 112 GRITALRVSPDGTRVAVVVED 132 (253)
T ss_pred CceEEEEECCCCcEEEEEEec
Confidence 011 24489999999999854
No 237
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=95.87 E-value=0.11 Score=54.30 Aligned_cols=49 Identities=12% Similarity=-0.004 Sum_probs=34.9
Q ss_pred ceEEEEeeeeccceEEEEEcCCCCCCCceEe-eecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 53 LALVNETWYKTSQTRTWLVCPGSKDVAPRVL-FDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 53 ~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~l-t~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
..|+|.... ..+|.++|.+|. .++.+ +...... -+|. |||||++|+|..
T Consensus 319 tkiAfv~~~---~~~L~~~D~dG~--n~~~ve~~~~~~i-----~sP~--~SPDG~~vAY~t 368 (912)
T TIGR02171 319 AKLAFRNDV---TGNLAYIDYTKG--ASRAVEIEDTISV-----YHPD--ISPDGKKVAFCT 368 (912)
T ss_pred eeEEEEEcC---CCeEEEEecCCC--CceEEEecCCCce-----ecCc--CCCCCCEEEEEE
Confidence 357777642 238999999988 77777 5544333 3555 999999999943
No 238
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=95.73 E-value=0.32 Score=44.30 Aligned_cols=59 Identities=10% Similarity=-0.001 Sum_probs=39.5
Q ss_pred cccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEE
Q 011049 41 LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIA 111 (494)
Q Consensus 41 ~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~ 111 (494)
.....|++||||+.++|++..+. ...||+...+++ .+.+... .. ...|. |++||.-.++
T Consensus 24 ~~~~s~AvS~dg~~~A~v~~~~~-~~~L~~~~~~~~---~~~~~~g--~~----l~~PS--~d~~g~~W~v 82 (253)
T PF10647_consen 24 YDVTSPAVSPDGSRVAAVSEGDG-GRSLYVGPAGGP---VRPVLTG--GS----LTRPS--WDPDGWVWTV 82 (253)
T ss_pred ccccceEECCCCCeEEEEEEcCC-CCEEEEEcCCCc---ceeeccC--Cc----ccccc--ccCCCCEEEE
Confidence 35678999999999999984333 678999987654 3333221 11 15666 9999864333
No 239
>PTZ00420 coronin; Provisional
Probab=95.68 E-value=0.41 Score=48.77 Aligned_cols=146 Identities=9% Similarity=0.074 Sum_probs=74.0
Q ss_pred CccceeeeccCCCCCCC-C-C-------eeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeee
Q 011049 15 SPRDIIYTQPAEPAEGE-K-P-------EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD 85 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~-~-~-------~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~ 85 (494)
+..+.|.++++ ..+ . . ..+..........+|+|++..++.++..++ .|.+.|+..+ +......
T Consensus 94 S~DgtIrIWDi---~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~Dg---tIrIWDl~tg--~~~~~i~ 165 (568)
T PTZ00420 94 SEDLTIRVWEI---PHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDS---FVNIWDIENE--KRAFQIN 165 (568)
T ss_pred eCCCeEEEEEC---CCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCC---eEEEEECCCC--cEEEEEe
Confidence 44567778887 321 1 1 123333344567789999988776654433 4556666655 3222111
Q ss_pred cccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEee-Ccchhhhhe
Q 011049 86 RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES-NREKYFETA 164 (494)
Q Consensus 86 ~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~-~~~~~~~~~ 164 (494)
.. . .-..+.|+|||+.++.... +. .+.++|+.+++...-... .+.. .
T Consensus 166 ~~--~-----~V~SlswspdG~lLat~s~-------------------D~--~IrIwD~Rsg~~i~tl~gH~g~~----~ 213 (568)
T PTZ00420 166 MP--K-----KLSSLKWNIKGNLLSGTCV-------------------GK--HMHIIDPRKQEIASSFHIHDGGK----N 213 (568)
T ss_pred cC--C-----cEEEEEECCCCCEEEEEec-------------------CC--EEEEEECCCCcEEEEEecccCCc----e
Confidence 11 1 1112349999997765431 11 377888888764332221 1110 0
Q ss_pred eeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 165 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 165 ~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
...+. ...|+++++.++.+..+...-+++.++|+..
T Consensus 214 s~~v~---~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~ 249 (568)
T PTZ00420 214 TKNIW---IDGLGGDDNYILSTGFSKNNMREMKLWDLKN 249 (568)
T ss_pred eEEEE---eeeEcCCCCEEEEEEcCCCCccEEEEEECCC
Confidence 00000 0134567766665444433335678888764
No 240
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.67 E-value=0.23 Score=43.68 Aligned_cols=48 Identities=13% Similarity=0.077 Sum_probs=31.5
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCccc
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN 467 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 467 (494)
..-+-+..|.+|..|| ......+-+.+.+. ++++-+ .+..|.|.-..+
T Consensus 242 ~d~l~Fyygt~DgW~p--~~~~d~~kdd~~ee--d~~Lde-dki~HAFV~~~~ 289 (301)
T KOG3975|consen 242 LDSLWFYYGTNDGWVP--SHYYDYYKDDVPEE--DLKLDE-DKIPHAFVVKHA 289 (301)
T ss_pred CcEEEEEccCCCCCcc--hHHHHHHhhhcchh--ceeecc-ccCCcceeeccc
Confidence 4678899999999987 66555555555442 244444 677898865443
No 241
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=95.62 E-value=0.011 Score=56.97 Aligned_cols=99 Identities=10% Similarity=0.080 Sum_probs=56.5
Q ss_pred cccccCCCCCCCCC-ccceeeeccCCCC------------CCCCCe--------------eccccccccccceecCCCce
Q 011049 2 VEAQDRGDANVEVS-PRDIIYTQPAEPA------------EGEKPE--------------ILHKLDLRFRSVSWCDDSLA 54 (494)
Q Consensus 2 ~~~~~~~~~~~~~~-~~~~i~~~~~~~~------------~~~~~~--------------~lt~~~~~~~~p~wspDg~~ 54 (494)
++|+.+++-.|.+. ..|.+|+.+.+-. ++..-. ++..+.......+|||||+.
T Consensus 225 ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~ 304 (636)
T KOG2394|consen 225 IKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKY 304 (636)
T ss_pred EEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCce
Confidence 47888888888754 4468888865310 111111 22334445567789999999
Q ss_pred EEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEE
Q 011049 55 LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 55 i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~ 112 (494)
||-++.+. -|-+.+-++. +..-+.. . +|. +-.-+|||||||+|+.-
T Consensus 305 LA~VSqDG----fLRvF~fdt~--eLlg~mk---S-YFG--GLLCvcWSPDGKyIvtG 350 (636)
T KOG2394|consen 305 LATVSQDG----FLRIFDFDTQ--ELLGVMK---S-YFG--GLLCVCWSPDGKYIVTG 350 (636)
T ss_pred EEEEecCc----eEEEeeccHH--HHHHHHH---h-hcc--ceEEEEEcCCccEEEec
Confidence 99887543 2334443432 2221111 1 111 33357899999988764
No 242
>PTZ00421 coronin; Provisional
Probab=95.56 E-value=0.57 Score=47.16 Aligned_cols=144 Identities=13% Similarity=-0.010 Sum_probs=71.9
Q ss_pred CccceeeeccCCCCCCCC--------CeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeec
Q 011049 15 SPRDIIYTQPAEPAEGEK--------PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR 86 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~--------~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~ 86 (494)
+..+.|.++++ ..+. ...|..........+|+|++..++.++..+ ..|.+-|+..+ +.......
T Consensus 95 S~DgtIkIWdi---~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~D---gtVrIWDl~tg--~~~~~l~~ 166 (493)
T PTZ00421 95 SEDGTIMGWGI---PEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGAD---MVVNVWDVERG--KAVEVIKC 166 (493)
T ss_pred eCCCEEEEEec---CCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCC---CEEEEEECCCC--eEEEEEcC
Confidence 44567777777 3221 122333334445678999976555554333 34666676655 33322221
Q ss_pred ccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheee
Q 011049 87 VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 166 (494)
Q Consensus 87 ~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 166 (494)
... .-..+.|+|||+.++.... +. .|.++|+.+++.......... .
T Consensus 167 h~~------~V~sla~spdG~lLatgs~------------------Dg---~IrIwD~rsg~~v~tl~~H~~-----~-- 212 (493)
T PTZ00421 167 HSD------QITSLEWNLDGSLLCTTSK------------------DK---KLNIIDPRDGTIVSSVEAHAS-----A-- 212 (493)
T ss_pred CCC------ceEEEEEECCCCEEEEecC------------------CC---EEEEEECCCCcEEEEEecCCC-----C--
Confidence 111 1112449999987765431 11 377888887764322211110 0
Q ss_pred eccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 167 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 167 ~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
......|.+++..++....+...-.++.++|+..
T Consensus 213 ---~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~ 246 (493)
T PTZ00421 213 ---KSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRK 246 (493)
T ss_pred ---cceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCC
Confidence 0001245566665554433333345677777654
No 243
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=95.54 E-value=0.06 Score=48.26 Aligned_cols=83 Identities=14% Similarity=0.118 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC----C-----CceeEEEeCCCCCCCCCCCCCccccccc
Q 011049 324 LVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA----P-----HLFCCGIARSGSYNKTLTPFGFQTEFRT 394 (494)
Q Consensus 324 ~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~----p-----~~~~a~v~~~~~~~~~~~~~~~~~~~~~ 394 (494)
...++...++.|.+.. ...+|.|++||||+.+.+.++..- + .+|..++..+|-.+.
T Consensus 75 s~~~l~~~L~~L~~~~--~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~------------- 139 (233)
T PF05990_consen 75 SGPALARFLRDLARAP--GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN------------- 139 (233)
T ss_pred HHHHHHHHHHHHHhcc--CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH-------------
Confidence 3555666666666652 248999999999999998886542 1 256667777664331
Q ss_pred ccccHHHHHhcCccccccCCCCCEEEEecCCCCC
Q 011049 395 LWEATNVYIEMSPITHANKIKKPILIIHGEVDDK 428 (494)
Q Consensus 395 ~~~~~~~~~~~sp~~~~~~~~~P~li~~G~~D~~ 428 (494)
+.+...- ..+.+...++.+.+..+|..
T Consensus 140 -----d~f~~~~--~~~~~~~~~itvy~s~~D~A 166 (233)
T PF05990_consen 140 -----DVFRSQL--PDLGSSARRITVYYSRNDRA 166 (233)
T ss_pred -----HHHHHHH--HHHhhcCCCEEEEEcCCchH
Confidence 1111100 02333447889999999975
No 244
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=95.53 E-value=1 Score=42.87 Aligned_cols=65 Identities=8% Similarity=-0.080 Sum_probs=31.6
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccc-ccccCCCCCC-ceeeCCCCCEEEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF-ENVYSDPGSP-MMTRTSTGTNVIAK 112 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~-~~~~~~~~~~-~~~~spDG~~i~~~ 112 (494)
..+|+|||+.++..... .+.|.+++++.+..+.+.+..-.. ......+..+ -+.++|||++++..
T Consensus 179 ~~~~~pdg~~lyv~~~~---~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~ 245 (330)
T PRK11028 179 HMVFHPNQQYAYCVNEL---NSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYAC 245 (330)
T ss_pred eEEECCCCCEEEEEecC---CCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEe
Confidence 46899999986654322 345666666522113232221110 0101111111 13479999977664
No 245
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.53 E-value=0.088 Score=48.94 Aligned_cols=118 Identities=16% Similarity=0.170 Sum_probs=69.1
Q ss_pred CCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHHhC---C------eEEEeC
Q 011049 233 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR---R------FAVLAG 303 (494)
Q Consensus 233 dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---G------~~v~~~ 303 (494)
.|.+|+..-..|+..+ .++..+|+++ +||.|.+- ..|- .+...|..- | |-|++|
T Consensus 132 eGL~iHFlhvk~p~~k-~~k~v~PlLl-~HGwPGsv-----------~EFy----kfIPlLT~p~~hg~~~d~~FEVI~P 194 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKK-KKKKVKPLLL-LHGWPGSV-----------REFY----KFIPLLTDPKRHGNESDYAFEVIAP 194 (469)
T ss_pred cceeEEEEEecCCccc-cCCcccceEE-ecCCCchH-----------HHHH----hhhhhhcCccccCCccceeEEEecc
Confidence 6888998888887653 3334456554 89987221 1111 122233332 3 677773
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHH-HHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEe
Q 011049 304 PSIPIIGEGDKLPNDRFVEQLVSSAEAAVE-EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA 374 (494)
Q Consensus 304 ~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~-~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 374 (494)
. ..|+|-+.....-+-. ...+...+. -+.+.|+ ++..|-|.-+|..++..++..+|+.+.+.-+
T Consensus 195 S---lPGygwSd~~sk~GFn-~~a~ArvmrkLMlRLg~---nkffiqGgDwGSiI~snlasLyPenV~GlHl 259 (469)
T KOG2565|consen 195 S---LPGYGWSDAPSKTGFN-AAATARVMRKLMLRLGY---NKFFIQGGDWGSIIGSNLASLYPENVLGLHL 259 (469)
T ss_pred C---CCCcccCcCCccCCcc-HHHHHHHHHHHHHHhCc---ceeEeecCchHHHHHHHHHhhcchhhhHhhh
Confidence 3 3456555433211111 111223333 3455665 8899999999999999999999998765543
No 246
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.51 E-value=0.036 Score=49.99 Aligned_cols=53 Identities=13% Similarity=0.069 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC---CCceeEEEeCCC
Q 011049 320 FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---PHLFCCGIARSG 377 (494)
Q Consensus 320 ~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~---p~~~~a~v~~~~ 377 (494)
..+++++...++|..+.-+ ....+.|||+||.++.-+|.+- .+-++..+.+..
T Consensus 46 ~l~~~a~~yv~~Ir~~QP~-----GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~ 101 (257)
T COG3319 46 SLDDMAAAYVAAIRRVQPE-----GPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDA 101 (257)
T ss_pred CHHHHHHHHHHHHHHhCCC-----CCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEecc
Confidence 3455565555555443222 4699999999999999888753 233444444433
No 247
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=95.45 E-value=0.36 Score=50.35 Aligned_cols=81 Identities=11% Similarity=0.124 Sum_probs=52.2
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
-.++..+|+.+. . . .+..........+.|||||+.++|.+.......++|+++.+ + .++......
T Consensus 39 ~~~~~~~~~~d~---~--~-~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~-g-----~~~~~~~~v--- 103 (620)
T COG1506 39 PLYKSSLWVSDG---K--T-VRLLTFGGGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVG-G-----LITKTAFGV--- 103 (620)
T ss_pred cccccceEEEec---c--c-ccccccCCcccccccCCCCCEEEEEeccCCCcceEEEEecC-C-----ceeeeeccc---
Confidence 345566777554 2 2 33444445678899999999999998544446899999987 3 122221111
Q ss_pred CCCCCceeeCCCCCEEEEEE
Q 011049 94 DPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~ 113 (494)
.... |+|+|..+++..
T Consensus 104 --~~~~--~~~~g~~~~~~~ 119 (620)
T COG1506 104 --SDAR--WSPDGDRIAFLT 119 (620)
T ss_pred --ccce--eCCCCCeEEEEe
Confidence 2223 999999999943
No 248
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=95.37 E-value=0.019 Score=51.04 Aligned_cols=22 Identities=27% Similarity=0.398 Sum_probs=18.7
Q ss_pred CCcEEEEecChHHHHHHHHHHh
Q 011049 343 PSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 343 ~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
..+|.++|||+||.++-.++..
T Consensus 77 ~~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred cccceEEEecccHHHHHHHHHH
Confidence 3689999999999999877663
No 249
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.28 E-value=0.03 Score=49.65 Aligned_cols=49 Identities=20% Similarity=0.206 Sum_probs=33.8
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC----CceeEEEeCCCC
Q 011049 330 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP----HLFCCGIARSGS 378 (494)
Q Consensus 330 ~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p----~~~~a~v~~~~~ 378 (494)
.|++|+.+...-.+..|.+.|||.||.+|.++++..+ +++..++++.|.
T Consensus 70 ~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 70 SALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 4444444431112356999999999999999998843 477888877663
No 250
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=95.17 E-value=1.9 Score=41.04 Aligned_cols=85 Identities=12% Similarity=0.057 Sum_probs=43.7
Q ss_pred ccceeeeccCCCCCCCCCeecc--ccccccccceecCCCceEEEEeeeeccceEEEEEcCC-CCCCCceEeeeccccccc
Q 011049 16 PRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG-SKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt--~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~-~g~~~~~~lt~~~~~~~~ 92 (494)
+.+.|.++++. .+++.+.+. .........++||||+.|+..... ...|.+.+++ .+ ..+.+......
T Consensus 10 ~~~~I~~~~~~--~~g~l~~~~~~~~~~~~~~l~~spd~~~lyv~~~~---~~~i~~~~~~~~g--~l~~~~~~~~~--- 79 (330)
T PRK11028 10 ESQQIHVWNLN--HEGALTLLQVVDVPGQVQPMVISPDKRHLYVGVRP---EFRVLSYRIADDG--ALTFAAESPLP--- 79 (330)
T ss_pred CCCCEEEEEEC--CCCceeeeeEEecCCCCccEEECCCCCEEEEEECC---CCcEEEEEECCCC--ceEEeeeecCC---
Confidence 34677888872 124433222 122233456899999987655432 3455555544 33 32222221111
Q ss_pred CCCCCC-ceeeCCCCCEEEEEE
Q 011049 93 SDPGSP-MMTRTSTGTNVIAKI 113 (494)
Q Consensus 93 ~~~~~~-~~~~spDG~~i~~~~ 113 (494)
+.| -+.++|||++++...
T Consensus 80 ---~~p~~i~~~~~g~~l~v~~ 98 (330)
T PRK11028 80 ---GSPTHISTDHQGRFLFSAS 98 (330)
T ss_pred ---CCceEEEECCCCCEEEEEE
Confidence 233 234899999776654
No 251
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=95.13 E-value=0.47 Score=44.25 Aligned_cols=116 Identities=10% Similarity=-0.002 Sum_probs=61.7
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEee---ee---ccceEEEEEcCCCCCCCceEeeecccc-c
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETW---YK---TSQTRTWLVCPGSKDVAPRVLFDRVFE-N 90 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~---~~---~~~~~~~~~~~~~g~~~~~~lt~~~~~-~ 90 (494)
+++|++|. +.++..=.... +....+..||||+.|+..+. |. .|..-|-+.|..+= +++.-..-+.. -
T Consensus 17 ~rv~viD~---d~~k~lGmi~~-g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL--~~~~EI~iP~k~R 90 (342)
T PF06433_consen 17 SRVYVIDA---DSGKLLGMIDT-GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTL--SPTGEIEIPPKPR 90 (342)
T ss_dssp EEEEEEET---TTTEEEEEEEE-ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTT--EEEEEEEETTS-B
T ss_pred ceEEEEEC---CCCcEEEEeec-ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcC--cccceEecCCcch
Confidence 58999998 65543322233 34566789999999886553 22 22333444455532 22221111211 0
Q ss_pred ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcc
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNRE 158 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 158 (494)
....+...+...|.|||++++.-. +|.. .+-++|++.++...-...+|+
T Consensus 91 ~~~~~~~~~~~ls~dgk~~~V~N~----------------TPa~---SVtVVDl~~~kvv~ei~~PGC 139 (342)
T PF06433_consen 91 AQVVPYKNMFALSADGKFLYVQNF----------------TPAT---SVTVVDLAAKKVVGEIDTPGC 139 (342)
T ss_dssp --BS--GGGEEE-TTSSEEEEEEE----------------SSSE---EEEEEETTTTEEEEEEEGTSE
T ss_pred heecccccceEEccCCcEEEEEcc----------------CCCC---eEEEEECCCCceeeeecCCCE
Confidence 011112223457999999877642 3322 388999999877665555555
No 252
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=95.09 E-value=0.091 Score=35.84 Aligned_cols=45 Identities=16% Similarity=0.079 Sum_probs=26.7
Q ss_pred cccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCC
Q 011049 220 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPE 264 (494)
Q Consensus 220 ~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg 264 (494)
..++.|...+++.||.-+...-+.++........+.|+|++.||-
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL 52 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGL 52 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--T
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCc
Confidence 356789999999999999888887665222334458999999994
No 253
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=95.08 E-value=1.4 Score=48.04 Aligned_cols=43 Identities=21% Similarity=0.216 Sum_probs=31.4
Q ss_pred CCccceeeec----cCCCCCCCCCeeccccccccccceecCCCceEEEEe
Q 011049 14 VSPRDIIYTQ----PAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNET 59 (494)
Q Consensus 14 ~~~~~~i~~~----~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~ 59 (494)
+...|+|.++ +. +.........-+......+||||+..|++++
T Consensus 93 ~~~~Gdi~~~~~~~~~---~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT 139 (928)
T PF04762_consen 93 ALASGDIILVREDPDP---DEDEIEIVGSVDSGILAASWSPDEELLALVT 139 (928)
T ss_pred EECCceEEEEEccCCC---CCceeEEEEEEcCcEEEEEECCCcCEEEEEe
Confidence 4456777777 44 4455556666666677789999999999987
No 254
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=95.04 E-value=0.32 Score=51.19 Aligned_cols=29 Identities=14% Similarity=0.160 Sum_probs=20.6
Q ss_pred ccccceecCCCceEEEEeeeeccceEEEEEc
Q 011049 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVC 72 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~ 72 (494)
...-.+|||||+.||+.++.. --.||-..
T Consensus 71 sv~CVR~S~dG~~lAsGSDD~--~v~iW~~~ 99 (942)
T KOG0973|consen 71 SVNCVRFSPDGSYLASGSDDR--LVMIWERA 99 (942)
T ss_pred ceeEEEECCCCCeEeeccCcc--eEEEeeec
Confidence 344567999999999877532 35667776
No 255
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=94.96 E-value=1.1 Score=44.86 Aligned_cols=135 Identities=13% Similarity=0.053 Sum_probs=67.4
Q ss_pred cccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEecc
Q 011049 37 HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKE 116 (494)
Q Consensus 37 t~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~ 116 (494)
|+.+..++.-+.||||++|++.+-. ...||.+..+.- ...+.+-+-+... . ..-.+.++-|+.++++.+.
T Consensus 379 ~k~~~nIs~~aiSPdg~~Ia~st~~---~~~iy~L~~~~~-vk~~~v~~~~~~~--~--~a~~i~ftid~~k~~~~s~-- 448 (691)
T KOG2048|consen 379 TKEKENISCAAISPDGNLIAISTVS---RTKIYRLQPDPN-VKVINVDDVPLAL--L--DASAISFTIDKNKLFLVSK-- 448 (691)
T ss_pred cCCccceeeeccCCCCCEEEEeecc---ceEEEEeccCcc-eeEEEeccchhhh--c--cceeeEEEecCceEEEEec--
Confidence 3444445566799999999997643 347888877652 1111111111000 0 1111225566665555541
Q ss_pred CccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeE
Q 011049 117 NDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQY 196 (494)
Q Consensus 117 ~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l 196 (494)
. ...+..+++++...+.+-...... -...+ .....|+||+++++.. .-..|
T Consensus 449 ----------------~--~~~le~~el~~ps~kel~~~~~~~-~~~~I------~~l~~SsdG~yiaa~~----t~g~I 499 (691)
T KOG2048|consen 449 ----------------N--IFSLEEFELETPSFKELKSIQSQA-KCPSI------SRLVVSSDGNYIAAIS----TRGQI 499 (691)
T ss_pred ----------------c--cceeEEEEecCcchhhhhcccccc-CCCcc------eeEEEcCCCCEEEEEe----ccceE
Confidence 0 012455555543322211110000 00000 1135678998887754 24679
Q ss_pred EEEEcCCCceeEee
Q 011049 197 HILSWPLKKSSQIT 210 (494)
Q Consensus 197 ~~~~~~~~~~~~lt 210 (494)
+++++++.+.+.+.
T Consensus 500 ~v~nl~~~~~~~l~ 513 (691)
T KOG2048|consen 500 FVYNLETLESHLLK 513 (691)
T ss_pred EEEEcccceeecch
Confidence 99999888776665
No 256
>PLN02209 serine carboxypeptidase
Probab=94.96 E-value=0.3 Score=48.20 Aligned_cols=61 Identities=13% Similarity=0.063 Sum_probs=45.8
Q ss_pred CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC--------------------Cc-EEEEEcCCCCCccCCcccHHHHHHH
Q 011049 416 KPILIIHGEVDDKVGLFPMQAERFFDALKGHG--------------------AL-SRLVLLPFEHHVYAARENVMHVIWE 474 (494)
Q Consensus 416 ~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g--------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~~ 474 (494)
.++||..|..|.+|+ ...++++.+.|+=.+ .. ..+.++.++||... ..++..+..
T Consensus 352 irVLiY~GD~D~icn--~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp--~qP~~al~m 427 (437)
T PLN02209 352 YRSLIFSGDHDITMP--FQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE--YLPEESSIM 427 (437)
T ss_pred ceEEEEECCccccCC--cHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC--cCHHHHHHH
Confidence 689999999999987 888889999886211 12 66777889999773 466677766
Q ss_pred HHHHHH
Q 011049 475 TDRWLQ 480 (494)
Q Consensus 475 ~~~fl~ 480 (494)
+.+|+.
T Consensus 428 ~~~fi~ 433 (437)
T PLN02209 428 FQRWIS 433 (437)
T ss_pred HHHHHc
Confidence 677764
No 257
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=94.92 E-value=0.19 Score=47.42 Aligned_cols=171 Identities=16% Similarity=0.144 Sum_probs=92.4
Q ss_pred cCCCCchhHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHH
Q 011049 282 FSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHL 361 (494)
Q Consensus 282 ~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~ 361 (494)
|...-......|.++|+-|+-+|..-+ +......++...|+.+.+++-.++- ...++.++|.|+|+-+--.+
T Consensus 272 Wr~lDk~v~~~l~~~gvpVvGvdsLRY------fW~~rtPe~~a~Dl~r~i~~y~~~w--~~~~~~liGySfGADvlP~~ 343 (456)
T COG3946 272 WRDLDKEVAEALQKQGVPVVGVDSLRY------FWSERTPEQIAADLSRLIRFYARRW--GAKRVLLIGYSFGADVLPFA 343 (456)
T ss_pred hhhhhHHHHHHHHHCCCceeeeehhhh------hhccCCHHHHHHHHHHHHHHHHHhh--CcceEEEEeecccchhhHHH
Confidence 544444556688899999997555322 1223345777899999998877753 35899999999999877766
Q ss_pred HHhCCCceeEEEeCCCCCCCC-CCCCCcccccccccccHHHHHhcCccccccCCC-CCEEEEecCC--CCCCCCCHHHHH
Q 011049 362 LAHAPHLFCCGIARSGSYNKT-LTPFGFQTEFRTLWEATNVYIEMSPITHANKIK-KPILIIHGEV--DDKVGLFPMQAE 437 (494)
Q Consensus 362 ~~~~p~~~~a~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~-~P~li~~G~~--D~~v~~~~~~~~ 437 (494)
-.+-|...+..|....+.... ...+.+.-+ -|-....-....+...+.++. .-+.-|.|.+ |..||
T Consensus 344 ~n~L~~~~r~~v~~~~ll~l~~~~~fe~~v~---gWlg~~~~g~~~~~~~~~~l~~~~v~CiYG~~e~d~~Cp------- 413 (456)
T COG3946 344 YNRLPPATRQRVRMVSLLGLGRTADFEISVE---GWLGMAGEGAGDVVPDIAKLPLARVQCIYGQEEKDTACP------- 413 (456)
T ss_pred HHhCCHHHHHHHHHHHHHhccccceEEEEEe---eeeccCCcCCCCcchhhhhCCcceeEEEecCccccccCC-------
Confidence 666554333322222111100 001111100 111000000123344445554 4466677765 45544
Q ss_pred HHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHH
Q 011049 438 RFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 479 (494)
Q Consensus 438 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl 479 (494)
.|+.+| ++.+..|| ||.|. ++.+.....|++=+
T Consensus 414 ----~l~~~~--~~~v~lpG-gHHFd--~dy~~la~~il~~~ 446 (456)
T COG3946 414 ----SLKAKG--VDTVKLPG-GHHFD--GDYEKLAKAILQGM 446 (456)
T ss_pred ----cchhhc--ceeEecCC-CcccC--ccHHHHHHHHHHHH
Confidence 233334 46778888 56564 44555555565544
No 258
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=94.90 E-value=0.098 Score=43.52 Aligned_cols=51 Identities=12% Similarity=0.038 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC----ceeEEEeCCC
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCGIARSG 377 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~----~~~a~v~~~~ 377 (494)
...+...++....+ ....+|.++|||+||.+|..++..... ....++++.+
T Consensus 11 ~~~i~~~~~~~~~~--~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~ 65 (153)
T cd00741 11 ANLVLPLLKSALAQ--YPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGP 65 (153)
T ss_pred HHHHHHHHHHHHHH--CCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCC
Confidence 44444455444433 135789999999999999988877643 3344555544
No 259
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=94.88 E-value=0.13 Score=59.17 Aligned_cols=75 Identities=9% Similarity=0.020 Sum_probs=47.5
Q ss_pred hCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh---CCCceeE
Q 011049 295 ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH---APHLFCC 371 (494)
Q Consensus 295 ~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~---~p~~~~a 371 (494)
..++.|+.++. .|.+.........+..++++.+.++.+ . ...+..++|||+||.++..++.+ .++++..
T Consensus 1092 ~~~~~v~~~~~---~g~~~~~~~~~~l~~la~~~~~~i~~~---~--~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~ 1163 (1296)
T PRK10252 1092 DPQWSIYGIQS---PRPDGPMQTATSLDEVCEAHLATLLEQ---Q--PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAF 1163 (1296)
T ss_pred CCCCcEEEEEC---CCCCCCCCCCCCHHHHHHHHHHHHHhh---C--CCCCEEEEEechhhHHHHHHHHHHHHcCCceeE
Confidence 45688877443 344333222334556666665555432 1 12479999999999999999885 4677777
Q ss_pred EEeCCC
Q 011049 372 GIARSG 377 (494)
Q Consensus 372 ~v~~~~ 377 (494)
++...+
T Consensus 1164 l~l~~~ 1169 (1296)
T PRK10252 1164 LGLLDT 1169 (1296)
T ss_pred EEEecC
Confidence 776654
No 260
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.85 E-value=2.9 Score=37.78 Aligned_cols=186 Identities=17% Similarity=0.207 Sum_probs=99.4
Q ss_pred CCCCeeccccccccccceecCCCc-eEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCE
Q 011049 30 GEKPEILHKLDLRFRSVSWCDDSL-ALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTN 108 (494)
Q Consensus 30 ~~~~~~lt~~~~~~~~p~wspDg~-~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~ 108 (494)
.|+..--+..+.+....+++|-.+ .++|.+ +- +...++.|.++. .++..+....+..+| +.-+ +||||+.
T Consensus 57 aGk~v~~~~lpaR~Hgi~~~p~~~ravafAR-rP--Gtf~~vfD~~~~-~~pv~~~s~~~RHfy---GHGv--fs~dG~~ 127 (366)
T COG3490 57 AGKIVFATALPARGHGIAFHPALPRAVAFAR-RP--GTFAMVFDPNGA-QEPVTLVSQEGRHFY---GHGV--FSPDGRL 127 (366)
T ss_pred CCceeeeeecccccCCeecCCCCcceEEEEe-cC--CceEEEECCCCC-cCcEEEecccCceee---cccc--cCCCCcE
Confidence 356665666677788889999754 555543 32 467888998876 366677666666555 4445 8999997
Q ss_pred EEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEE--EeeCcchhhhheeeeccCCCcccccccCcEEEEE
Q 011049 109 VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI--WESNREKYFETAVALVFGQGEEDINLNQLKILTS 186 (494)
Q Consensus 109 i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l--~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~ 186 (494)
++-+.+..+ ..+--|-++|...+ .+++ |..-|. .-.+..+.+||+.+++.
T Consensus 128 LYATEndfd----------------~~rGViGvYd~r~~-fqrvgE~~t~Gi-----------GpHev~lm~DGrtlvva 179 (366)
T COG3490 128 LYATENDFD----------------PNRGVIGVYDAREG-FQRVGEFSTHGI-----------GPHEVTLMADGRTLVVA 179 (366)
T ss_pred EEeecCCCC----------------CCCceEEEEecccc-cceecccccCCc-----------CcceeEEecCCcEEEEe
Confidence 766543211 11222555555432 2222 111110 00234666777776664
Q ss_pred EecC-CC-------------CCeEEEEEcCCCceeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCC
Q 011049 187 KESK-TE-------------ITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKD 252 (494)
Q Consensus 187 ~~s~-~~-------------p~~l~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~ 252 (494)
..+- +. -|.+.+++..+++...-..++ +.+.....+.+.+- .||+.+.+.-|.-+. .+
T Consensus 180 nGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp---~~l~~lSiRHld~g-~dgtvwfgcQy~G~~----~d 251 (366)
T COG3490 180 NGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLP---ASLRQLSIRHLDIG-RDGTVWFGCQYRGPR----ND 251 (366)
T ss_pred CCceecccccCccccchhhcCccEEEEeccccchhhhccCc---hhhhhcceeeeeeC-CCCcEEEEEEeeCCC----cc
Confidence 3211 11 245666664444432111111 12233345555544 789888888886432 12
Q ss_pred CCCcEEEEec
Q 011049 253 GPLPCLFWAY 262 (494)
Q Consensus 253 ~~~P~vv~~h 262 (494)
+|.+|-.|
T Consensus 252 --~ppLvg~~ 259 (366)
T COG3490 252 --LPPLVGHF 259 (366)
T ss_pred --CCcceeec
Confidence 66666555
No 261
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=94.84 E-value=0.23 Score=45.21 Aligned_cols=16 Identities=6% Similarity=0.308 Sum_probs=12.8
Q ss_pred ceeeCCCCCEEEEEEe
Q 011049 99 MMTRTSTGTNVIAKIK 114 (494)
Q Consensus 99 ~~~~spDG~~i~~~~~ 114 (494)
..+|||||+.|+-++.
T Consensus 96 ~~~WSPdgrhiL~tse 111 (447)
T KOG4497|consen 96 SISWSPDGRHILLTSE 111 (447)
T ss_pred eeeECCCcceEeeeec
Confidence 4569999999988763
No 262
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=94.84 E-value=1 Score=40.30 Aligned_cols=170 Identities=8% Similarity=-0.008 Sum_probs=86.5
Q ss_pred eeeeccCCCC--CCCCCe-eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 19 IIYTQPAEPA--EGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 19 ~i~~~~~~~~--~~~~~~-~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
.|+++++... +-|.+. +++.........+-|+||++ +++...++ .+.+-|+.+| +.++.+.....+.
T Consensus 39 ~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~-alS~swD~---~lrlWDl~~g--~~t~~f~GH~~dV---- 108 (315)
T KOG0279|consen 39 TIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNF-ALSASWDG---TLRLWDLATG--ESTRRFVGHTKDV---- 108 (315)
T ss_pred EEEEEEeccCccccCceeeeeeccceEecceEEccCCce-EEeccccc---eEEEEEecCC--cEEEEEEecCCce----
Confidence 5667776432 234444 45555777788999999986 44443333 4555566776 7788877766542
Q ss_pred CCCceeeCCCCCEEEEEEeccC-----c-cceEEEEccCC---------CCCCCCCCceEeeecCCCceEEEEeeCcchh
Q 011049 96 GSPMMTRTSTGTNVIAKIKKEN-----D-EQIYILLNGRG---------FTPEGNIPFLDLFDINTGSKERIWESNREKY 160 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~-----~-~~~~~~~~~~g---------~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 160 (494)
.-+.+|||.++|+--+.... . .+-.+.+..++ +.|.... .+++...-.+..++|...+...
T Consensus 109 --lsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~--p~Ivs~s~DktvKvWnl~~~~l 184 (315)
T KOG0279|consen 109 --LSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESN--PIIVSASWDKTVKVWNLRNCQL 184 (315)
T ss_pred --EEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCC--cEEEEccCCceEEEEccCCcch
Confidence 11226888887765442110 0 00111111111 1222211 2333333344567777655411
Q ss_pred hhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 161 FETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 161 ~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
-..+..-...-+...+||||...+ +...-.++++++++.++.
T Consensus 185 ~~~~~gh~~~v~t~~vSpDGslca----sGgkdg~~~LwdL~~~k~ 226 (315)
T KOG0279|consen 185 RTTFIGHSGYVNTVTVSPDGSLCA----SGGKDGEAMLWDLNEGKN 226 (315)
T ss_pred hhccccccccEEEEEECCCCCEEe----cCCCCceEEEEEccCCce
Confidence 101110000112358899997543 234456788888776553
No 263
>PTZ00420 coronin; Provisional
Probab=94.82 E-value=1.9 Score=44.15 Aligned_cols=55 Identities=13% Similarity=0.168 Sum_probs=34.6
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+..+.|-++|+ ..++..............+|+|||+.|+..+ . ...|.+.|+.++
T Consensus 145 S~DgtIrIWDl---~tg~~~~~i~~~~~V~SlswspdG~lLat~s-~---D~~IrIwD~Rsg 199 (568)
T PTZ00420 145 GFDSFVNIWDI---ENEKRAFQINMPKKLSSLKWNIKGNLLSGTC-V---GKHMHIIDPRKQ 199 (568)
T ss_pred eCCCeEEEEEC---CCCcEEEEEecCCcEEEEEECCCCCEEEEEe-c---CCEEEEEECCCC
Confidence 44567888888 5454322112233456788999999876543 2 346777788765
No 264
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.80 E-value=0.13 Score=45.47 Aligned_cols=68 Identities=16% Similarity=0.144 Sum_probs=39.1
Q ss_pred cccccCCCCC-----EEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHh
Q 011049 408 ITHANKIKKP-----ILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 408 ~~~~~~~~~P-----~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~ 482 (494)
..++.+..+| +.++....|..+| ......+.+... |..++++ + .||.-...-....+.++|.+-|++.
T Consensus 294 ~T~v~~fp~Pvdpsl~ivv~A~~D~Yip--r~gv~~lQ~~WP--g~eVr~~--e-gGHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 294 CTHVANFPVPVDPSLIIVVQAKEDAYIP--RTGVRSLQEIWP--GCEVRYL--E-GGHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred hchhhcCCCCCCCCeEEEEEecCCcccc--ccCcHHHHHhCC--CCEEEEe--e-cCceeeeehhchHHHHHHHHHHHhh
Confidence 4455555544 5677889999987 543333333332 4444444 4 4886443333445666777777664
No 265
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=94.79 E-value=1.2 Score=44.69 Aligned_cols=123 Identities=12% Similarity=0.128 Sum_probs=69.0
Q ss_pred ccccccccccceecCCCceEEEEeeeeccceEEEEEcC-CCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEe
Q 011049 36 LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP-GSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 36 lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~-~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~ 114 (494)
+..........+|||||+.|+=.+. ...|++.++ +.+ +.+....+...+ -..++++|+|+.|+....
T Consensus 199 l~~h~~~v~~~~fs~d~~~l~s~s~----D~tiriwd~~~~~----~~~~~l~gH~~~----v~~~~f~p~g~~i~Sgs~ 266 (456)
T KOG0266|consen 199 LSGHTRGVSDVAFSPDGSYLLSGSD----DKTLRIWDLKDDG----RNLKTLKGHSTY----VTSVAFSPDGNLLVSGSD 266 (456)
T ss_pred ccccccceeeeEECCCCcEEEEecC----CceEEEeeccCCC----eEEEEecCCCCc----eEEEEecCCCCEEEEecC
Confidence 3344455667899999996664432 334555555 332 233222222211 123458999954444321
Q ss_pred ccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCC
Q 011049 115 KENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEIT 194 (494)
Q Consensus 115 ~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~ 194 (494)
+.. +.++|+.+++..+....... ......|++|+..++.. +. -.
T Consensus 267 ------------------D~t---vriWd~~~~~~~~~l~~hs~-----------~is~~~f~~d~~~l~s~--s~--d~ 310 (456)
T KOG0266|consen 267 ------------------DGT---VRIWDVRTGECVRKLKGHSD-----------GISGLAFSPDGNLLVSA--SY--DG 310 (456)
T ss_pred ------------------CCc---EEEEeccCCeEEEeeeccCC-----------ceEEEEECCCCCEEEEc--CC--Cc
Confidence 222 88899999887776654322 01123788888776543 22 34
Q ss_pred eEEEEEcCCCce
Q 011049 195 QYHILSWPLKKS 206 (494)
Q Consensus 195 ~l~~~~~~~~~~ 206 (494)
.+.++|..++..
T Consensus 311 ~i~vwd~~~~~~ 322 (456)
T KOG0266|consen 311 TIRVWDLETGSK 322 (456)
T ss_pred cEEEEECCCCce
Confidence 577788777663
No 266
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=94.77 E-value=1.3 Score=39.24 Aligned_cols=39 Identities=10% Similarity=0.025 Sum_probs=29.9
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEe
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNET 59 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~ 59 (494)
..|=++|+ -.+++..-+...+.+-...|||||+++++..
T Consensus 87 k~ir~wd~---r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~ 125 (313)
T KOG1407|consen 87 KTIRIWDI---RSGKCTARIETKGENINITWSPDGEYIAVGN 125 (313)
T ss_pred ceEEEEEe---ccCcEEEEeeccCcceEEEEcCCCCEEEEec
Confidence 35556666 5677777777777777889999999999875
No 267
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=94.72 E-value=2.4 Score=39.13 Aligned_cols=121 Identities=12% Similarity=0.058 Sum_probs=67.9
Q ss_pred cceeeeccCCCCCCCC-Ceeccccccc--cccceecCCCceEEEEee-eeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 17 RDIIYTQPAEPAEGEK-PEILHKLDLR--FRSVSWCDDSLALVNETW-YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~-~~~lt~~~~~--~~~p~wspDg~~i~f~~~-~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
..-++++|. .+++ +.+++..+.+ +..-+|||||++|+-+.+ +......|=+.|+.. ..+++-+.+...
T Consensus 27 G~~~~v~D~---~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~---~~~ri~E~~s~G-- 98 (305)
T PF07433_consen 27 GTFALVFDC---RTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR---GYRRIGEFPSHG-- 98 (305)
T ss_pred CcEEEEEEc---CCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC---CcEEEeEecCCC--
Confidence 335566666 4454 4456555543 346789999998665543 332356787888773 345555544322
Q ss_pred CCCCCCceeeCCCCCEEEEEEeccC---cc-ceEEEEccCCCCCCCCCCceEeeecCCCceEEEEe
Q 011049 93 SDPGSPMMTRTSTGTNVIAKIKKEN---DE-QIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 154 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~~~~~---~~-~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 154 (494)
.+|=+.. +.|||+.|++....-. .. ..++ +.+...+.|..+|..+|+....|.
T Consensus 99 IGPHel~--l~pDG~tLvVANGGI~Thpd~GR~kL-------Nl~tM~psL~~ld~~sG~ll~q~~ 155 (305)
T PF07433_consen 99 IGPHELL--LMPDGETLVVANGGIETHPDSGRAKL-------NLDTMQPSLVYLDARSGALLEQVE 155 (305)
T ss_pred cChhhEE--EcCCCCEEEEEcCCCccCcccCceec-------ChhhcCCceEEEecCCCceeeeee
Confidence 2332223 8999988887542111 01 1111 112224568889988988655444
No 268
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=94.67 E-value=0.083 Score=43.12 Aligned_cols=39 Identities=26% Similarity=0.319 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 324 LVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 324 ~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
....+...++.+.++.. +.+|.+.|||.||.+|..++..
T Consensus 46 ~~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 46 LYDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHh
Confidence 34455566666665543 4789999999999999888765
No 269
>PF03283 PAE: Pectinacetylesterase
Probab=94.62 E-value=0.053 Score=51.88 Aligned_cols=36 Identities=14% Similarity=0.297 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHH
Q 011049 327 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLL 362 (494)
Q Consensus 327 d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~ 362 (494)
-+.+++++|.+++.-++++|.|.|.|+||+.++.-+
T Consensus 139 i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 139 ILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 356788999998888899999999999999987654
No 270
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=94.56 E-value=0.57 Score=45.31 Aligned_cols=109 Identities=6% Similarity=-0.044 Sum_probs=58.6
Q ss_pred ceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCC
Q 011049 53 LALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTP 132 (494)
Q Consensus 53 ~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~ 132 (494)
+-|+|+..++ .+.|.++|.++. +........+. ..-...+||||++++... +
T Consensus 5 ~~l~~V~~~~--~~~v~viD~~t~--~~~~~i~~~~~------~h~~~~~s~Dgr~~yv~~-------------r----- 56 (369)
T PF02239_consen 5 GNLFYVVERG--SGSVAVIDGATN--KVVARIPTGGA------PHAGLKFSPDGRYLYVAN-------------R----- 56 (369)
T ss_dssp GGEEEEEEGG--GTEEEEEETTT---SEEEEEE-STT------EEEEEE-TT-SSEEEEEE-------------T-----
T ss_pred ccEEEEEecC--CCEEEEEECCCC--eEEEEEcCCCC------ceeEEEecCCCCEEEEEc-------------C-----
Confidence 4466666554 478999998765 32222221111 011123799999876653 1
Q ss_pred CCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCcee
Q 011049 133 EGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 207 (494)
Q Consensus 133 ~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~ 207 (494)
++ .+.++|+.+++...-...... . ....+|+||+.++..... |+.+.++|.++.+..
T Consensus 57 dg---~vsviD~~~~~~v~~i~~G~~-----~-------~~i~~s~DG~~~~v~n~~---~~~v~v~D~~tle~v 113 (369)
T PF02239_consen 57 DG---TVSVIDLATGKVVATIKVGGN-----P-------RGIAVSPDGKYVYVANYE---PGTVSVIDAETLEPV 113 (369)
T ss_dssp TS---EEEEEETTSSSEEEEEE-SSE-----E-------EEEEE--TTTEEEEEEEE---TTEEEEEETTT--EE
T ss_pred CC---eEEEEECCcccEEEEEecCCC-----c-------ceEEEcCCCCEEEEEecC---CCceeEeccccccce
Confidence 11 388999999875433222111 0 124788999988776543 678888987765543
No 271
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=94.48 E-value=0.2 Score=50.67 Aligned_cols=81 Identities=17% Similarity=0.227 Sum_probs=55.3
Q ss_pred eeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.||+|++ ++|+... |...++..++..|+|+|..|+-.+|..+ -++|-+=-..+..|...+...-.
T Consensus 459 ~IfvWS~---qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkT--VRiW~if~s~~~vEtl~i~sdvl--------- 524 (893)
T KOG0291|consen 459 EIFVWSV---QTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKT--VRIWDIFSSSGTVETLEIRSDVL--------- 524 (893)
T ss_pred EEEEEEe---ecCeeeehhcCCCCcceeeEEccccCeEEeccccce--EEEEEeeccCceeeeEeecccee---------
Confidence 7999999 8777654 4445566677889999999888888665 56776644444334444433221
Q ss_pred CceeeCCCCCEEEEEEe
Q 011049 98 PMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~ 114 (494)
.+.++|||+.|+....
T Consensus 525 -~vsfrPdG~elaVaTl 540 (893)
T KOG0291|consen 525 -AVSFRPDGKELAVATL 540 (893)
T ss_pred -EEEEcCCCCeEEEEEe
Confidence 1238999999998774
No 272
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=94.46 E-value=2 Score=38.90 Aligned_cols=141 Identities=14% Similarity=0.072 Sum_probs=76.6
Q ss_pred CCccceeeeccCCCCCCCC-CeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 14 VSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~-~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
.+..+.|+++++ ..++ ...+...........|+|+++.|+... . ...+.+.++..+ ...........
T Consensus 69 ~~~~~~i~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~---~~~i~~~~~~~~--~~~~~~~~~~~--- 136 (289)
T cd00200 69 GSSDKTIRLWDL---ETGECVRTLTGHTSYVSSVAFSPDGRILSSSS-R---DKTIKVWDVETG--KCLTTLRGHTD--- 136 (289)
T ss_pred EcCCCeEEEEEc---CcccceEEEeccCCcEEEEEEcCCCCEEEEec-C---CCeEEEEECCCc--EEEEEeccCCC---
Confidence 344678889988 5433 334444444556788999976555432 1 457888887754 32322221110
Q ss_pred CCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCC
Q 011049 93 SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQG 172 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~ 172 (494)
.-..+.|+|+++.++.... .+ .+.++|+.+++.......... .-.
T Consensus 137 ---~i~~~~~~~~~~~l~~~~~------------------~~---~i~i~d~~~~~~~~~~~~~~~-----------~i~ 181 (289)
T cd00200 137 ---WVNSVAFSPDGTFVASSSQ------------------DG---TIKLWDLRTGKCVATLTGHTG-----------EVN 181 (289)
T ss_pred ---cEEEEEEcCcCCEEEEEcC------------------CC---cEEEEEccccccceeEecCcc-----------ccc
Confidence 0112348999776654320 11 377788876654443332211 011
Q ss_pred cccccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 173 EEDINLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 173 ~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
...++++++.+++... ...+.+++...++
T Consensus 182 ~~~~~~~~~~l~~~~~----~~~i~i~d~~~~~ 210 (289)
T cd00200 182 SVAFSPDGEKLLSSSS----DGTIKLWDLSTGK 210 (289)
T ss_pred eEEECCCcCEEEEecC----CCcEEEEECCCCc
Confidence 2367788876665433 3567777776544
No 273
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=94.45 E-value=0.079 Score=51.62 Aligned_cols=85 Identities=9% Similarity=0.092 Sum_probs=53.3
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCCch-hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDR-FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP 366 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~-~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p 366 (494)
.....|.+.||..-. ...+..-.+.... ..+.....+...|+.+.+.. ..+|.|+||||||.++..++...+
T Consensus 69 ~li~~L~~~GY~~~~----~l~~~pYDWR~~~~~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 69 KLIENLEKLGYDRGK----DLFAAPYDWRLSPAERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred HHHHHHHhcCcccCC----EEEEEeechhhchhhHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHHHHhcc
Confidence 345577888876421 0111111221111 12344566677777776643 479999999999999999988774
Q ss_pred C------ceeEEEeCCCCC
Q 011049 367 H------LFCCGIARSGSY 379 (494)
Q Consensus 367 ~------~~~a~v~~~~~~ 379 (494)
. .++..|.+++..
T Consensus 142 ~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 142 QEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred chhhHHhhhhEEEEeCCCC
Confidence 3 478888887754
No 274
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=94.42 E-value=1.6 Score=40.59 Aligned_cols=138 Identities=11% Similarity=0.086 Sum_probs=82.4
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
+.=|++++. .|..+-.+|..+-......||.||..||- ..- ..+|.+....++ ..+.....+..+ -
T Consensus 86 D~AflW~~~--~ge~~~eltgHKDSVt~~~FshdgtlLAT-Gdm---sG~v~v~~~stg--~~~~~~~~e~~d------i 151 (399)
T KOG0296|consen 86 DLAFLWDIS--TGEFAGELTGHKDSVTCCSFSHDGTLLAT-GDM---SGKVLVFKVSTG--GEQWKLDQEVED------I 151 (399)
T ss_pred ceEEEEEcc--CCcceeEecCCCCceEEEEEccCceEEEe-cCC---CccEEEEEcccC--ceEEEeecccCc------e
Confidence 356777773 23356678887777778899999987663 222 345666665655 334333333222 1
Q ss_pred CceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccc
Q 011049 98 PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 177 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s 177 (494)
-.++|-|-+..++.-.. ++. +|.+.+.++...++....+. +-....|.
T Consensus 152 eWl~WHp~a~illAG~~------------------DGs---vWmw~ip~~~~~kv~~Gh~~-----------~ct~G~f~ 199 (399)
T KOG0296|consen 152 EWLKWHPRAHILLAGST------------------DGS---VWMWQIPSQALCKVMSGHNS-----------PCTCGEFI 199 (399)
T ss_pred EEEEecccccEEEeecC------------------CCc---EEEEECCCcceeeEecCCCC-----------Cccccccc
Confidence 13458998876655431 222 77777777555555554432 11224789
Q ss_pred ccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 178 LNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 178 ~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
|||++++..+. -..|.+++++++.
T Consensus 200 pdGKr~~tgy~----dgti~~Wn~ktg~ 223 (399)
T KOG0296|consen 200 PDGKRILTGYD----DGTIIVWNPKTGQ 223 (399)
T ss_pred CCCceEEEEec----CceEEEEecCCCc
Confidence 99988776554 3567788888774
No 275
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=94.38 E-value=0.49 Score=45.90 Aligned_cols=59 Identities=7% Similarity=0.035 Sum_probs=36.4
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeec-ccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR-VFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~-~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
..++||||+.++-+. ....++++|-.+| +..-..+. +.... +-..+.||||+++++-.+
T Consensus 195 ~VRysPDG~~Fat~g----sDgki~iyDGktg--e~vg~l~~~~aHkG----sIfalsWsPDs~~~~T~S 254 (603)
T KOG0318|consen 195 CVRYSPDGSRFATAG----SDGKIYIYDGKTG--EKVGELEDSDAHKG----SIFALSWSPDSTQFLTVS 254 (603)
T ss_pred eEEECCCCCeEEEec----CCccEEEEcCCCc--cEEEEecCCCCccc----cEEEEEECCCCceEEEec
Confidence 347999999766543 2457999987766 43333331 11110 122456999999998765
No 276
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=94.30 E-value=0.042 Score=50.78 Aligned_cols=72 Identities=21% Similarity=0.296 Sum_probs=41.7
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 124 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~ 124 (494)
..+|||||+.|+--+-.. --++|-++..+. ++.-.+..+.. . .+.|||||++|+-...
T Consensus 120 ~~~fsp~g~~l~tGsGD~--TvR~WD~~TeTp------~~t~KgH~~WV--l--cvawsPDgk~iASG~~---------- 177 (480)
T KOG0271|consen 120 SVQFSPTGSRLVTGSGDT--TVRLWDLDTETP------LFTCKGHKNWV--L--CVAWSPDGKKIASGSK---------- 177 (480)
T ss_pred EEEecCCCceEEecCCCc--eEEeeccCCCCc------ceeecCCccEE--E--EEEECCCcchhhcccc----------
Confidence 357999999988654222 246666655543 22222222110 1 1239999999986542
Q ss_pred EccCCCCCCCCCCceEeeecCCCce
Q 011049 125 LNGRGFTPEGNIPFLDLFDINTGSK 149 (494)
Q Consensus 125 ~~~~g~~~~~~~~~l~~~d~~~g~~ 149 (494)
++ .|..+|+++|+.
T Consensus 178 --------dg---~I~lwdpktg~~ 191 (480)
T KOG0271|consen 178 --------DG---SIRLWDPKTGQQ 191 (480)
T ss_pred --------CC---eEEEecCCCCCc
Confidence 22 277788877753
No 277
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=94.27 E-value=0.4 Score=43.50 Aligned_cols=142 Identities=10% Similarity=0.005 Sum_probs=70.5
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceec-CCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc-ccCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWC-DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN-VYSDP 95 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~ws-pDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~-~~~~~ 95 (494)
+.||.++. ++++.+.+... . ..+.+.. +||+ |++. . ...+.++++.++ +.+.+....... ....|
T Consensus 22 ~~i~~~~~---~~~~~~~~~~~-~-~~G~~~~~~~g~-l~v~-~----~~~~~~~d~~~g--~~~~~~~~~~~~~~~~~~ 88 (246)
T PF08450_consen 22 GRIYRVDP---DTGEVEVIDLP-G-PNGMAFDRPDGR-LYVA-D----SGGIAVVDPDTG--KVTVLADLPDGGVPFNRP 88 (246)
T ss_dssp TEEEEEET---TTTEEEEEESS-S-EEEEEEECTTSE-EEEE-E----TTCEEEEETTTT--EEEEEEEEETTCSCTEEE
T ss_pred CEEEEEEC---CCCeEEEEecC-C-CceEEEEccCCE-EEEE-E----cCceEEEecCCC--cEEEEeeccCCCcccCCC
Confidence 45555555 44443332222 2 2334555 6754 3333 2 223455588776 666666553111 11111
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
.. +...|||+ ++++.+... .........+++++.+ ++.+.+...-.. .+...
T Consensus 89 ND--~~vd~~G~-ly~t~~~~~------------~~~~~~~g~v~~~~~~-~~~~~~~~~~~~------------pNGi~ 140 (246)
T PF08450_consen 89 ND--VAVDPDGN-LYVTDSGGG------------GASGIDPGSVYRIDPD-GKVTVVADGLGF------------PNGIA 140 (246)
T ss_dssp EE--EEE-TTS--EEEEEECCB------------CTTCGGSEEEEEEETT-SEEEEEEEEESS------------EEEEE
T ss_pred ce--EEEcCCCC-EEEEecCCC------------ccccccccceEEECCC-CeEEEEecCccc------------ccceE
Confidence 22 23789998 766654210 0000000358999988 666665543211 12347
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
|++|++.+++..+. ...|+.++++.
T Consensus 141 ~s~dg~~lyv~ds~---~~~i~~~~~~~ 165 (246)
T PF08450_consen 141 FSPDGKTLYVADSF---NGRIWRFDLDA 165 (246)
T ss_dssp EETTSSEEEEEETT---TTEEEEEEEET
T ss_pred ECCcchheeecccc---cceeEEEeccc
Confidence 89999888765432 34588888753
No 278
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=94.25 E-value=0.039 Score=54.07 Aligned_cols=67 Identities=15% Similarity=0.046 Sum_probs=50.8
Q ss_pred CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCccc----HHHHHHHHHHHHHHhcCCC
Q 011049 416 KPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAREN----VMHVIWETDRWLQKYCLSN 486 (494)
Q Consensus 416 ~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~----~~~~~~~~~~fl~~~l~~~ 486 (494)
+|+.|+...-|+. .+.+..++.+|++.|.++.+.+.++-.|+|..... -.+.-+.-++=|+..|...
T Consensus 788 Pp~~i~ac~mDP~----LDD~vmfA~kLr~lG~~v~l~vle~lPHGFLnft~ls~E~~~~~~~CI~rl~~~L~~~ 858 (880)
T KOG4388|consen 788 PPVHIVACAMDPM----LDDSVMFARKLRNLGQPVTLRVLEDLPHGFLNFTALSRETRQAAELCIERLRLVLTPP 858 (880)
T ss_pred CCceEEEeccCcc----hhHHHHHHHHHHhcCCceeehhhhcCCccceeHHhhCHHHHHHHHHHHHHHHHHhCCC
Confidence 6899999999997 68899999999999999999999999999854221 1233334455566666543
No 279
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.23 E-value=0.3 Score=48.12 Aligned_cols=62 Identities=15% Similarity=0.143 Sum_probs=46.4
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC--------------------Cc-EEEEEcCCCCCccCCcccHHHHHH
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHG--------------------AL-SRLVLLPFEHHVYAARENVMHVIW 473 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g--------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~ 473 (494)
..++||..|..|..|+ ....+.+.+.|+=.+ .+ ..++++.++||... ..++..+.
T Consensus 347 ~irVLiY~Gd~D~icn--~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp--~qP~~al~ 422 (433)
T PLN03016 347 GYRSLIYSGDHDIAVP--FLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE--YRPNETFI 422 (433)
T ss_pred CceEEEEECCccccCC--cHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC--CCHHHHHH
Confidence 3699999999999988 888889998886211 12 56777889999873 35667777
Q ss_pred HHHHHHH
Q 011049 474 ETDRWLQ 480 (494)
Q Consensus 474 ~~~~fl~ 480 (494)
.+..|+.
T Consensus 423 m~~~Fi~ 429 (433)
T PLN03016 423 MFQRWIS 429 (433)
T ss_pred HHHHHHc
Confidence 6777764
No 280
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=94.05 E-value=0.26 Score=48.88 Aligned_cols=88 Identities=13% Similarity=0.019 Sum_probs=56.9
Q ss_pred CCccceeeeccCCCCCCCCC-eeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 14 VSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~-~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
.+|...|=|||+ ..++. -+|......+.+.+|||||+.|+-+.. ...|.++....+ ...+.+.++...-
T Consensus 696 asyd~Ti~lWDl---~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcK----Dg~~rVy~Prs~---e~pv~Eg~gpvgt 765 (1012)
T KOG1445|consen 696 ASYDSTIELWDL---ANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCK----DGTLRVYEPRSR---EQPVYEGKGPVGT 765 (1012)
T ss_pred hhccceeeeeeh---hhhhhhheeccCcCceeEEEECCCCcceeeeec----CceEEEeCCCCC---CCccccCCCCccC
Confidence 456667778888 44433 245555566778999999999997763 456888877654 3556666655421
Q ss_pred CCCCCCceeeCCCCCEEEEEEe
Q 011049 93 SDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~~ 114 (494)
..-.+.|.=||+.|+....
T Consensus 766 ---RgARi~wacdgr~viv~Gf 784 (1012)
T KOG1445|consen 766 ---RGARILWACDGRIVIVVGF 784 (1012)
T ss_pred ---cceeEEEEecCcEEEEecc
Confidence 1222348889987777653
No 281
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=93.99 E-value=4.7 Score=39.58 Aligned_cols=114 Identities=22% Similarity=0.156 Sum_probs=65.0
Q ss_pred CCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCCCCCC--------CCCCccccc--------ccccccH---
Q 011049 339 GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--------TPFGFQTEF--------RTLWEAT--- 399 (494)
Q Consensus 339 ~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~~~~~--------~~~~~~~~~--------~~~~~~~--- 399 (494)
+ .+++.+.+.|.|||.+-|++.++.- .-.|+|..-|+++.-. .+..+.... ....++.
T Consensus 353 g-F~~~qLILSGlSMGTfgAlYYga~l--~P~AIiVgKPL~NLGtiA~n~rL~RP~~F~TslDvl~~~~g~~s~~~i~~l 429 (511)
T TIGR03712 353 G-FDHDQLILSGLSMGTFGALYYGAKL--SPHAIIVGKPLVNLGTIASRMRLDRPDEFGTALDILLLNTGGTSSEDVVKL 429 (511)
T ss_pred C-CCHHHeeeccccccchhhhhhcccC--CCceEEEcCcccchhhhhccccccCCCCCchHHHhHHhhcCCCCHHHHHHH
Confidence 5 5788999999999999999998875 2377888888876311 111111100 0001111
Q ss_pred -HHHHhcCccccccCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCc
Q 011049 400 -NVYIEMSPITHANKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHV 461 (494)
Q Consensus 400 -~~~~~~sp~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 461 (494)
+.+++ -+.+.+--++...+..=.+|..= ...-.++...|.+.++++--.-+|| .|+
T Consensus 430 n~~fW~--~f~~~d~S~T~F~i~YM~~DDYD---~~A~~~L~~~l~~~~~~v~~kG~~G-RHN 486 (511)
T TIGR03712 430 DNRFWK--KFKKSDLSKTTFAIAYMKNDDYD---PTAFQDLLPYLSKQGAQVMSKGIPG-RHN 486 (511)
T ss_pred HHHHHH--HHhhcCcccceEEEEeeccccCC---HHHHHHHHHHHHhcCCEEEecCCCC-CCC
Confidence 11111 11122223466666555555542 4556788888888877655555555 454
No 282
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=93.92 E-value=3.1 Score=39.90 Aligned_cols=64 Identities=11% Similarity=-0.072 Sum_probs=31.2
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceE---eeecc--ccc--ccCCCCCC-ceeeCCCCCEEEEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV---LFDRV--FEN--VYSDPGSP-MMTRTSTGTNVIAKI 113 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~---lt~~~--~~~--~~~~~~~~-~~~~spDG~~i~~~~ 113 (494)
..+.+|||+.|+. +++.+ ..+.+++++.. +.... +.... +.+ .... ..| .+.++|||++++..-
T Consensus 91 ~i~~~~~g~~l~v-any~~--g~v~v~~l~~~-g~l~~~~~~~~~~g~g~~~~rq~~-~h~H~v~~~pdg~~v~v~d 162 (345)
T PF10282_consen 91 HIAVDPDGRFLYV-ANYGG--GSVSVFPLDDD-GSLGEVVQTVRHEGSGPNPDRQEG-PHPHQVVFSPDGRFVYVPD 162 (345)
T ss_dssp EEEECTTSSEEEE-EETTT--TEEEEEEECTT-SEEEEEEEEEESEEEESSTTTTSS-TCEEEEEE-TTSSEEEEEE
T ss_pred EEEEecCCCEEEE-EEccC--CeEEEEEccCC-cccceeeeecccCCCCCccccccc-ccceeEEECCCCCEEEEEe
Confidence 4568899987554 55543 45666666541 12222 22111 111 1111 112 234899999886653
No 283
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=93.91 E-value=0.19 Score=43.59 Aligned_cols=67 Identities=16% Similarity=0.076 Sum_probs=44.3
Q ss_pred eEEEeCCCCCCCCCCCC----CCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 298 FAVLAGPSIPIIGEGDK----LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 298 ~~v~~~~~~~~~g~g~~----~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
..|++|-||-..-.... .......+-...|+.+|.++-+++.. +...+.|.|||.|+.+...++...
T Consensus 46 ~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 45666666543222111 11233345568899999998777642 335799999999999999998764
No 284
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=93.82 E-value=2.9 Score=37.85 Aligned_cols=138 Identities=12% Similarity=0.074 Sum_probs=73.6
Q ss_pred cceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
.+.|+++++ ..++... +...........|+|+++.|+..+ . ...+++.++..+ +..........
T Consensus 114 ~~~i~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~---~~~i~i~d~~~~--~~~~~~~~~~~------ 178 (289)
T cd00200 114 DKTIKVWDV---ETGKCLTTLRGHTDWVNSVAFSPDGTFVASSS-Q---DGTIKLWDLRTG--KCVATLTGHTG------ 178 (289)
T ss_pred CCeEEEEEC---CCcEEEEEeccCCCcEEEEEEcCcCCEEEEEc-C---CCcEEEEEcccc--ccceeEecCcc------
Confidence 678888887 4343333 332333456788999987666543 1 346888887755 33333332111
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 175 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~ 175 (494)
.-..+.|+|+|+.+++... ++ .+.++|+.+++.......... .. ....
T Consensus 179 ~i~~~~~~~~~~~l~~~~~------------------~~---~i~i~d~~~~~~~~~~~~~~~----~i-------~~~~ 226 (289)
T cd00200 179 EVNSVAFSPDGEKLLSSSS------------------DG---TIKLWDLSTGKCLGTLRGHEN----GV-------NSVA 226 (289)
T ss_pred ccceEEECCCcCEEEEecC------------------CC---cEEEEECCCCceecchhhcCC----ce-------EEEE
Confidence 0112348999988877641 11 377888877654443321110 00 1235
Q ss_pred ccccCcEEEEEEecCCCCCeEEEEEcCCCc
Q 011049 176 INLNQLKILTSKESKTEITQYHILSWPLKK 205 (494)
Q Consensus 176 ~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~ 205 (494)
+++++ .+++... ....+++++...++
T Consensus 227 ~~~~~-~~~~~~~---~~~~i~i~~~~~~~ 252 (289)
T cd00200 227 FSPDG-YLLASGS---EDGTIRVWDLRTGE 252 (289)
T ss_pred EcCCC-cEEEEEc---CCCcEEEEEcCCce
Confidence 66664 3444332 23467777765433
No 285
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.57 E-value=0.11 Score=51.74 Aligned_cols=68 Identities=13% Similarity=0.258 Sum_probs=54.3
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC-C-------cEEEEEcCCCCCccCCc-ccHHHHHHHHHHHHHHhcC
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHG-A-------LSRLVLLPFEHHVYAAR-ENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g-~-------~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~fl~~~l~ 484 (494)
--.+|+.||..|+.|| +..+..+++++.+.- . -+++.+.||.+|..... ...-+.+..+.+|.++-..
T Consensus 353 GGKLI~~HG~aD~~I~--p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~A 429 (474)
T PF07519_consen 353 GGKLILYHGWADPLIP--PQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKA 429 (474)
T ss_pred CCeEEEEecCCCCccC--CCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCC
Confidence 3689999999999998 999999999987642 1 26899999999987654 3344788899999986443
No 286
>PTZ00421 coronin; Provisional
Probab=93.55 E-value=4.9 Score=40.55 Aligned_cols=55 Identities=13% Similarity=0.132 Sum_probs=35.6
Q ss_pred CccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+..+.|.++|+ ..++... +..........+|+|||+.|+..+. ...|.+.|+..+
T Consensus 145 s~DgtVrIWDl---~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~----Dg~IrIwD~rsg 200 (493)
T PTZ00421 145 GADMVVNVWDV---ERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSK----DKKLNIIDPRDG 200 (493)
T ss_pred eCCCEEEEEEC---CCCeEEEEEcCCCCceEEEEEECCCCEEEEecC----CCEEEEEECCCC
Confidence 44567888888 5554433 3333344567889999998775542 346777787765
No 287
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=93.53 E-value=0.58 Score=44.03 Aligned_cols=100 Identities=18% Similarity=0.159 Sum_probs=63.8
Q ss_pred CCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCE
Q 011049 29 EGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTN 108 (494)
Q Consensus 29 ~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~ 108 (494)
.++.+++--...+...+..-|+||..|.-.+ +...+-++|+.+. +.+..+..++---..+ -. .+++||||++
T Consensus 330 Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsss----RDdtl~viDlRt~--eI~~~~sA~g~k~asD-wt-rvvfSpd~~Y 401 (459)
T KOG0288|consen 330 RSADKTRSVPLGGRVTSLDLSMDGLELLSSS----RDDTLKVIDLRTK--EIRQTFSAEGFKCASD-WT-RVVFSPDGSY 401 (459)
T ss_pred cCCceeeEeecCcceeeEeeccCCeEEeeec----CCCceeeeecccc--cEEEEeeccccccccc-cc-eeEECCCCce
Confidence 3445555445555777888999999877553 3556888888876 6666655443211111 11 2338999998
Q ss_pred EEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCc
Q 011049 109 VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNR 157 (494)
Q Consensus 109 i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~ 157 (494)
++-.+. ++ .++++++.+|+.+.+-...+
T Consensus 402 vaAGS~------------------dg---sv~iW~v~tgKlE~~l~~s~ 429 (459)
T KOG0288|consen 402 VAAGSA------------------DG---SVYIWSVFTGKLEKVLSLST 429 (459)
T ss_pred eeeccC------------------CC---cEEEEEccCceEEEEeccCC
Confidence 876542 22 39999999999887665543
No 288
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=93.49 E-value=0.17 Score=48.29 Aligned_cols=36 Identities=14% Similarity=0.186 Sum_probs=31.5
Q ss_pred CCcEEEEecChHHHHHHHHHHhCC--CceeEEEeCCCC
Q 011049 343 PSRIAVGGHSYGAFMTAHLLAHAP--HLFCCGIARSGS 378 (494)
Q Consensus 343 ~~ri~i~G~S~GG~~a~~~~~~~p--~~~~a~v~~~~~ 378 (494)
..++.++|||+||..+.+++...+ .+++..+.+++.
T Consensus 126 a~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 126 AKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred CCceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 378999999999999999999987 788888887764
No 289
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=93.37 E-value=0.73 Score=39.06 Aligned_cols=56 Identities=11% Similarity=0.092 Sum_probs=38.5
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEe
Q 011049 318 DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA 374 (494)
Q Consensus 318 ~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 374 (494)
..+.+....++.+.++-|.... ....++.++|||||+.++..++...+.....+|.
T Consensus 84 ~~~A~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~ 139 (177)
T PF06259_consen 84 PGYARAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVL 139 (177)
T ss_pred chHHHHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEE
Confidence 3444555666666666666554 3457999999999999999888774444544443
No 290
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=93.37 E-value=0.24 Score=51.14 Aligned_cols=89 Identities=8% Similarity=-0.036 Sum_probs=51.1
Q ss_pred CCCccceeeeccCCCCCCCCCe-eccc--------cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEe
Q 011049 13 EVSPRDIIYTQPAEPAEGEKPE-ILHK--------LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 83 (494)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~~~~-~lt~--------~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~l 83 (494)
.++-.|.|+++++ +.+... .||. ..-....|+|+|||..+++... .+.|-+++..+....-+..
T Consensus 155 vss~dG~v~iw~~---~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~----d~~Vkvy~r~~we~~f~Lr 227 (933)
T KOG1274|consen 155 VSSCDGKVQIWDL---QDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPV----DNTVKVYSRKGWELQFKLR 227 (933)
T ss_pred EEecCceEEEEEc---ccchhhhhcccCCccccccccceeeeeeecCCCCeEEeecc----CCeEEEEccCCceeheeec
Confidence 3556778999988 433221 1221 1123457899999877777653 3467788877762221222
Q ss_pred eecccccccCCCCCCceeeCCCCCEEEEEEe
Q 011049 84 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 84 t~~~~~~~~~~~~~~~~~~spDG~~i~~~~~ 114 (494)
.+.... .--.+.|||.|++||-...
T Consensus 228 ~~~~ss------~~~~~~wsPnG~YiAAs~~ 252 (933)
T KOG1274|consen 228 DKLSSS------KFSDLQWSPNGKYIAASTL 252 (933)
T ss_pred cccccc------ceEEEEEcCCCcEEeeecc
Confidence 222111 1113449999999987653
No 291
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=93.29 E-value=1.1 Score=42.99 Aligned_cols=117 Identities=5% Similarity=-0.050 Sum_probs=65.6
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceE
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 122 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~ 122 (494)
.....|+|+|+..+|++.+ ..-+|..|+.+. ....+..-.+... -+...+- .|||+.+|++...
T Consensus 260 i~~a~f~p~G~~~i~~s~r---rky~ysyDle~a--k~~k~~~~~g~e~-~~~e~Fe--VShd~~fia~~G~-------- 323 (514)
T KOG2055|consen 260 IQKAEFAPNGHSVIFTSGR---RKYLYSYDLETA--KVTKLKPPYGVEE-KSMERFE--VSHDSNFIAIAGN-------- 323 (514)
T ss_pred cceeeecCCCceEEEeccc---ceEEEEeecccc--ccccccCCCCccc-chhheeE--ecCCCCeEEEccc--------
Confidence 3445799999977777643 446888888765 4344433222210 0012222 5999998888642
Q ss_pred EEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 123 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 123 ~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
.-+|.++...|++...-..-+|. + ....|+.|+..++.+.. ..++|+.++.
T Consensus 324 -------------~G~I~lLhakT~eli~s~KieG~---------v---~~~~fsSdsk~l~~~~~----~GeV~v~nl~ 374 (514)
T KOG2055|consen 324 -------------NGHIHLLHAKTKELITSFKIEGV---------V---SDFTFSSDSKELLASGG----TGEVYVWNLR 374 (514)
T ss_pred -------------CceEEeehhhhhhhhheeeeccE---------E---eeEEEecCCcEEEEEcC----CceEEEEecC
Confidence 22588887777653221122221 0 12256777766665433 2488888876
Q ss_pred CC
Q 011049 203 LK 204 (494)
Q Consensus 203 ~~ 204 (494)
..
T Consensus 375 ~~ 376 (514)
T KOG2055|consen 375 QN 376 (514)
T ss_pred Cc
Confidence 54
No 292
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=93.28 E-value=3.2 Score=38.89 Aligned_cols=50 Identities=10% Similarity=0.061 Sum_probs=30.9
Q ss_pred ceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcC
Q 011049 138 FLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 202 (494)
Q Consensus 138 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~ 202 (494)
.||++|..++ .+++...+- ...+...||||+++++++-+. ...+++++++
T Consensus 144 ~lyr~~p~g~-~~~l~~~~~-----------~~~NGla~SpDg~tly~aDT~---~~~i~r~~~d 193 (307)
T COG3386 144 SLYRVDPDGG-VVRLLDDDL-----------TIPNGLAFSPDGKTLYVADTP---ANRIHRYDLD 193 (307)
T ss_pred eEEEEcCCCC-EEEeecCcE-----------EecCceEECCCCCEEEEEeCC---CCeEEEEecC
Confidence 4999998654 444443321 112345899999988775432 4567777665
No 293
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=93.24 E-value=0.23 Score=48.20 Aligned_cols=53 Identities=21% Similarity=0.313 Sum_probs=34.7
Q ss_pred eeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccC
Q 011049 101 TRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQ 180 (494)
Q Consensus 101 ~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~ 180 (494)
++||||+++|..+ .|| .|.++|..+.+..-+ ..-||.+.+++ .|||||
T Consensus 297 ~FS~DG~~LA~VS-------------qDG--------fLRvF~fdt~eLlg~----mkSYFGGLLCv-------cWSPDG 344 (636)
T KOG2394|consen 297 AFSPDGKYLATVS-------------QDG--------FLRIFDFDTQELLGV----MKSYFGGLLCV-------CWSPDG 344 (636)
T ss_pred eEcCCCceEEEEe-------------cCc--------eEEEeeccHHHHHHH----HHhhccceEEE-------EEcCCc
Confidence 4899999999886 233 277777776443221 11377666666 899998
Q ss_pred cEEEE
Q 011049 181 LKILT 185 (494)
Q Consensus 181 ~~~~~ 185 (494)
+.|+.
T Consensus 345 KyIvt 349 (636)
T KOG2394|consen 345 KYIVT 349 (636)
T ss_pred cEEEe
Confidence 76654
No 294
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=93.23 E-value=9.7 Score=38.93 Aligned_cols=62 Identities=11% Similarity=-0.001 Sum_probs=41.3
Q ss_pred ccceecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEec
Q 011049 44 RSVSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 115 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~ 115 (494)
+..+-|||.+.++|+-+..+ ++-.+-+.++.+|..-+..++. ..+..+|.+|++.+.|+...
T Consensus 132 g~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~i~~----------~~~~~~Wa~d~~~lfYt~~d 194 (682)
T COG1770 132 GAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDEITN----------TSGSFAWAADGKTLFYTRLD 194 (682)
T ss_pred eeeeeCCCCceEEEEEecccccEEEEEEEecccccccchhhcc----------cccceEEecCCCeEEEEEEc
Confidence 45678999999999876332 4667777788876211111111 23445599999999999854
No 295
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=93.08 E-value=0.84 Score=42.28 Aligned_cols=85 Identities=13% Similarity=-0.006 Sum_probs=51.7
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
+....||||+. +|.++|.-..--+|.++.++| ..+.+...+... ..|..+. .+|+|++|+....
T Consensus 247 aaIhis~dGrF-LYasNRg~dsI~~f~V~~~~g--~L~~~~~~~teg--~~PR~F~--i~~~g~~Liaa~q--------- 310 (346)
T COG2706 247 AAIHISPDGRF-LYASNRGHDSIAVFSVDPDGG--KLELVGITPTEG--QFPRDFN--INPSGRFLIAANQ--------- 310 (346)
T ss_pred eEEEECCCCCE-EEEecCCCCeEEEEEEcCCCC--EEEEEEEeccCC--cCCccce--eCCCCCEEEEEcc---------
Confidence 45568999986 566676543345556666666 433333333222 2356666 7999998876541
Q ss_pred EEccCCCCCCCCCCceEeeecCCCceEEEE
Q 011049 124 LLNGRGFTPEGNIPFLDLFDINTGSKERIW 153 (494)
Q Consensus 124 ~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~ 153 (494)
+++...+|..|-++|+...+.
T Consensus 311 ---------~sd~i~vf~~d~~TG~L~~~~ 331 (346)
T COG2706 311 ---------KSDNITVFERDKETGRLTLLG 331 (346)
T ss_pred ---------CCCcEEEEEEcCCCceEEecc
Confidence 333445888888888765543
No 296
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=93.00 E-value=1.4 Score=41.21 Aligned_cols=165 Identities=11% Similarity=0.081 Sum_probs=81.9
Q ss_pred CCccceeeeccCCCCCCCCCeec-cc-----cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecc
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEIL-HK-----LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV 87 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~l-t~-----~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~ 87 (494)
+|..|.+..+.+. +.|++.+- |. .+..+..|.++.++.+++|.+. ..+||.+++.+. +++..-..+
T Consensus 153 lC~DGsl~~v~Ld--~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy----~G~v~~~dlsg~--~~~~~~~~~ 224 (342)
T PF06433_consen 153 LCGDGSLLTVTLD--ADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSY----EGNVYSADLSGD--SAKFGKPWS 224 (342)
T ss_dssp EETTSCEEEEEET--STSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBT----TSEEEEEEETTS--SEEEEEEEE
T ss_pred EecCCceEEEEEC--CCCCEeEeeccccCCCCcccccccceECCCCeEEEEec----CCEEEEEeccCC--cccccCccc
Confidence 5666766666661 23444422 11 1223346678878888888763 457999999887 555433322
Q ss_pred c-ccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCC--CCCCceEeeecCCCceEEEEeeCcchhhhhe
Q 011049 88 F-ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPE--GNIPFLDLFDINTGSKERIWESNREKYFETA 164 (494)
Q Consensus 88 ~-~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 164 (494)
. .+.....+ |-|-|.+++-.. .+....++.+. .|.... .....+|++|++++++...+.-...+
T Consensus 225 ~~t~~e~~~~-----WrPGG~Q~~A~~--~~~~rlyvLMh-~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~----- 291 (342)
T PF06433_consen 225 LLTDAEKADG-----WRPGGWQLIAYH--AASGRLYVLMH-QGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPI----- 291 (342)
T ss_dssp SS-HHHHHTT-----EEE-SSS-EEEE--TTTTEEEEEEE-E--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEE-----
T ss_pred ccCccccccC-----cCCcceeeeeec--cccCeEEEEec-CCCCCCccCCceEEEEEECCCCeEEEEEeCCCcc-----
Confidence 1 00000013 888887643221 11223344443 232111 11347999999998876655533220
Q ss_pred eeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeE
Q 011049 165 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 208 (494)
Q Consensus 165 ~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~ 208 (494)
.+..+|.|.+=+++.... .-..|+++|..+++..+
T Consensus 292 -------~Si~Vsqd~~P~L~~~~~--~~~~l~v~D~~tGk~~~ 326 (342)
T PF06433_consen 292 -------DSIAVSQDDKPLLYALSA--GDGTLDVYDAATGKLVR 326 (342)
T ss_dssp -------SEEEEESSSS-EEEEEET--TTTEEEEEETTT--EEE
T ss_pred -------ceEEEccCCCcEEEEEcC--CCCeEEEEeCcCCcEEe
Confidence 012455666555554432 23578999988876543
No 297
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=92.89 E-value=0.92 Score=44.62 Aligned_cols=149 Identities=9% Similarity=-0.003 Sum_probs=73.9
Q ss_pred EEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCCCc---hhHHHHHhCCeEEEeC
Q 011049 227 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP---TSSLIFLARRFAVLAG 303 (494)
Q Consensus 227 ~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~G~~v~~~ 303 (494)
+.+....+..+..|++.-.. +|.. .|+|||+-|||..+.-.....--+|.....-+. .....|-.. -.++..
T Consensus 49 v~v~~~~~~~LFYwf~eS~~-~P~~---dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~-aNiLfL 123 (454)
T KOG1282|consen 49 VTVNESEGRQLFYWFFESEN-NPET---DPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKE-ANILFL 123 (454)
T ss_pred EECCCCCCceEEEEEEEccC-CCCC---CCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCcccccc-ccEEEE
Confidence 44444567889999987653 2222 699999999985442111111111111110000 000011111 112222
Q ss_pred CCCCCCCCCCCCCC---chhHHHHHHHHHHHH-HHHHHcCCCCCCcEEEEecChHHHHHHHHH----HhC-----C-Cce
Q 011049 304 PSIPIIGEGDKLPN---DRFVEQLVSSAEAAV-EEVVRRGVADPSRIAVGGHSYGAFMTAHLL----AHA-----P-HLF 369 (494)
Q Consensus 304 ~~~~~~g~g~~~~~---~~~~~~~~~d~~~~v-~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~----~~~-----p-~~~ 369 (494)
+..-..|+.-+... ..--+..++|...++ +|+.+.+....+.+.|.|.||+|..+-.+| ..+ | =-+
T Consensus 124 d~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNL 203 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINL 203 (454)
T ss_pred ecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccc
Confidence 22112233222111 011123345554444 677777666678899999999996554444 322 1 246
Q ss_pred eEEEeCCCCCC
Q 011049 370 CCGIARSGSYN 380 (494)
Q Consensus 370 ~a~v~~~~~~~ 380 (494)
++.+...|+.+
T Consensus 204 kG~~IGNg~td 214 (454)
T KOG1282|consen 204 KGYAIGNGLTD 214 (454)
T ss_pred eEEEecCcccC
Confidence 88888888755
No 298
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=92.85 E-value=0.34 Score=44.85 Aligned_cols=84 Identities=10% Similarity=0.011 Sum_probs=51.1
Q ss_pred cceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
-|+|++.|+ ..-++.. +-..+......+|||||+.||-.+..++ -|-+..+..| .++++.-.... +
T Consensus 152 ~GdV~l~d~---~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGT---VIRVf~v~~G----~kl~eFRRG~~---~ 218 (391)
T KOG2110|consen 152 SGDVVLFDT---INLQPVNTINAHKGPLAALAFSPDGTLLATASEKGT---VIRVFSVPEG----QKLYEFRRGTY---P 218 (391)
T ss_pred CceEEEEEc---ccceeeeEEEecCCceeEEEECCCCCEEEEeccCce---EEEEEEcCCc----cEeeeeeCCce---e
Confidence 578999998 5444443 3344555667889999999997765433 4444454444 34554432211 1
Q ss_pred CCC-ceeeCCCCCEEEEEE
Q 011049 96 GSP-MMTRTSTGTNVIAKI 113 (494)
Q Consensus 96 ~~~-~~~~spDG~~i~~~~ 113 (494)
.+. .+++|||+.+|...+
T Consensus 219 ~~IySL~Fs~ds~~L~~sS 237 (391)
T KOG2110|consen 219 VSIYSLSFSPDSQFLAASS 237 (391)
T ss_pred eEEEEEEECCCCCeEEEec
Confidence 111 234899999888776
No 299
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=92.66 E-value=5.3 Score=39.16 Aligned_cols=86 Identities=5% Similarity=0.021 Sum_probs=45.8
Q ss_pred CCccceeeeccCCCCCCC-CCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 14 VSPRDIIYTQPAEPAEGE-KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~-~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
++....+|+.++ +.. ...+.|.......-.++||-|-+|+ .-+. ...+-+-+... +...|..+-..-
T Consensus 35 Y~nGksv~ir~i---~~~~~~~iYtEH~~~vtVAkySPsG~yiA---SGD~-sG~vRIWdtt~---~~hiLKnef~v~-- 102 (603)
T KOG0318|consen 35 YTNGKSVIIRNI---DNPASVDIYTEHAHQVTVAKYSPSGFYIA---SGDV-SGKVRIWDTTQ---KEHILKNEFQVL-- 102 (603)
T ss_pred EeCCCEEEEEEC---CCccceeeeccccceeEEEEeCCCceEEe---ecCC-cCcEEEEeccC---cceeeeeeeeec--
Confidence 344447788887 332 3344555544444557999997555 3222 23344444332 223444332111
Q ss_pred CCCCCC--ceeeCCCCCEEEEEEe
Q 011049 93 SDPGSP--MMTRTSTGTNVIAKIK 114 (494)
Q Consensus 93 ~~~~~~--~~~~spDG~~i~~~~~ 114 (494)
..| .+.|++||++|+....
T Consensus 103 ---aG~I~Di~Wd~ds~RI~avGE 123 (603)
T KOG0318|consen 103 ---AGPIKDISWDFDSKRIAAVGE 123 (603)
T ss_pred ---ccccccceeCCCCcEEEEEec
Confidence 222 1349999999998753
No 300
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.63 E-value=3.8 Score=38.77 Aligned_cols=69 Identities=17% Similarity=0.140 Sum_probs=60.2
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCcccHHHHHHHHHHHHHHhcCC
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 485 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~fl~~~l~~ 485 (494)
..+.+.+.+..|.++| ..+.+++.+..+.+|..++..-+.+..|..........+.....+|+.+....
T Consensus 225 ~~~~ly~~s~~d~v~~--~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLP--ADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred cccceeecCCcccccc--HHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccc
Confidence 3677888899999988 99999999999999999999999999998766677778999999999988654
No 301
>PLN02454 triacylglycerol lipase
Probab=92.51 E-value=0.3 Score=47.06 Aligned_cols=42 Identities=24% Similarity=0.251 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
...+++...|+.++++..-..-+|.++|||+||.+|..+|..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 345566677777776542222359999999999999988753
No 302
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=92.50 E-value=3.5 Score=40.30 Aligned_cols=59 Identities=14% Similarity=0.097 Sum_probs=34.2
Q ss_pred eecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCce-eeCCCCCEEEE
Q 011049 47 SWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMM-TRTSTGTNVIA 111 (494)
Q Consensus 47 ~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~-~~spDG~~i~~ 111 (494)
.|-|+.+..+.++.+++ --+||-++--- +-+++.........- ..+.. .|+|||+.||-
T Consensus 275 ~whP~~k~~FlT~s~Dg-tlRiWdv~~~k---~q~qVik~k~~~g~R--v~~tsC~~nrdg~~iAa 334 (641)
T KOG0772|consen 275 CWHPDNKEEFLTCSYDG-TLRIWDVNNTK---SQLQVIKTKPAGGKR--VPVTSCAWNRDGKLIAA 334 (641)
T ss_pred ccccCcccceEEecCCC-cEEEEecCCch---hheeEEeeccCCCcc--cCceeeecCCCcchhhh
Confidence 69999999888887776 56777765322 223333332221000 11111 29999998754
No 303
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=92.50 E-value=0.1 Score=48.40 Aligned_cols=133 Identities=17% Similarity=0.210 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHc-CCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCC-CCCCCCC----------CCCC-----
Q 011049 325 VSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS-GSYNKTL----------TPFG----- 387 (494)
Q Consensus 325 ~~d~~~~v~~l~~~-~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~-~~~~~~~----------~~~~----- 387 (494)
+..+..+++-..++ .-+.-++..|.|.|-=|..++..|...|.. .++|.++ -+.+... -.|.
T Consensus 214 v~a~srAMdlAq~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDprv-~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~p 292 (507)
T COG4287 214 VYAVSRAMDLAQDELEQVEIKGFMVTGASKRGWTTWLTAIADPRV-FAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAP 292 (507)
T ss_pred HHHHHHHHHHHHhhhhheeeeeEEEeccccchHHHHHHHhcCcch-hhhhhhHHhhcccHHHHHHHHHhhCCCCCcccch
Confidence 44555555543332 224457899999999999999999988754 3444322 1111100 0000
Q ss_pred ccccc-ccccccH---HHHHhcCccccc-----cCCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 011049 388 FQTEF-RTLWEAT---NVYIEMSPITHA-----NKIKKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFE 458 (494)
Q Consensus 388 ~~~~~-~~~~~~~---~~~~~~sp~~~~-----~~~~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 458 (494)
+..+. ....+.+ ....-.+|+.+. .++..|-+|+.+..|...+ ++.+.-++..|... .-+.+.|+.
T Consensus 293 yyaegi~erl~tp~fkqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~--pDsa~lYyd~LPG~---kaLrmvPN~ 367 (507)
T COG4287 293 YYAEGIDERLETPLFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFV--PDSANLYYDDLPGE---KALRMVPND 367 (507)
T ss_pred hHhhhHHHhhcCHHHHHHHHhhcHHHHhhhhhhhhccccceeecccCCcccC--CCccceeeccCCCc---eeeeeCCCC
Confidence 00000 0000111 223335676665 5677899999999888876 78888888888643 468899999
Q ss_pred CCccC
Q 011049 459 HHVYA 463 (494)
Q Consensus 459 ~H~~~ 463 (494)
.|...
T Consensus 368 ~H~~~ 372 (507)
T COG4287 368 PHNLI 372 (507)
T ss_pred cchhh
Confidence 99764
No 304
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=92.48 E-value=0.6 Score=42.66 Aligned_cols=83 Identities=12% Similarity=0.142 Sum_probs=49.8
Q ss_pred CccceeeeccCCCCCCCCCe---eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPE---ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~---~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
+.++.|+++++ . +|. .+-.+....+..+|||||+.|+-.+...- .--+|-+....+ .+...+...
T Consensus 68 yk~~~vqvwsl---~--Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~l-riTVWSL~t~~~-----~~~~~pK~~- 135 (447)
T KOG4497|consen 68 YKDPKVQVWSL---V--QPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDL-RITVWSLNTQKG-----YLLPHPKTN- 135 (447)
T ss_pred eccceEEEEEe---e--cceeEEEeccCCCcceeeeECCCcceEeeeeccee-EEEEEEecccee-----EEecccccC-
Confidence 34457777777 2 332 34455556677789999999998876443 344555544322 222222221
Q ss_pred cCCCCCCceeeCCCCCEEEEEEe
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~~ 114 (494)
...+.+.|||++.+..++
T Consensus 136 -----~kg~~f~~dg~f~ai~sR 153 (447)
T KOG4497|consen 136 -----VKGYAFHPDGQFCAILSR 153 (447)
T ss_pred -----ceeEEECCCCceeeeeec
Confidence 123348999999988764
No 305
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=92.47 E-value=2.4 Score=42.53 Aligned_cols=142 Identities=12% Similarity=0.076 Sum_probs=74.4
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
+....|.++|+ ...+...+.+...........|+|+|+.|+..+. ++ .+.+-++.++ ++..........
T Consensus 222 s~D~tiriwd~-~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~-D~---tvriWd~~~~--~~~~~l~~hs~~---- 290 (456)
T KOG0266|consen 222 SDDKTLRIWDL-KDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSD-DG---TVRIWDVRTG--ECVRKLKGHSDG---- 290 (456)
T ss_pred cCCceEEEeec-cCCCeEEEEecCCCCceEEEEecCCCCEEEEecC-CC---cEEEEeccCC--eEEEeeeccCCc----
Confidence 34456777777 2222334455555555678899999966555443 22 3444444544 444444332211
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceE---EEEeeCcchhhhheeeeccCC
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE---RIWESNREKYFETAVALVFGQ 171 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~---~l~~~~~~~~~~~~~~~~s~~ 171 (494)
--.+.+++||..|+-.+ .++ .+.++|+.++... .+...... . ..
T Consensus 291 --is~~~f~~d~~~l~s~s------------------~d~---~i~vwd~~~~~~~~~~~~~~~~~~------~----~~ 337 (456)
T KOG0266|consen 291 --ISGLAFSPDGNLLVSAS------------------YDG---TIRVWDLETGSKLCLKLLSGAENS------A----PV 337 (456)
T ss_pred --eEEEEECCCCCEEEEcC------------------CCc---cEEEEECCCCceeeeecccCCCCC------C----ce
Confidence 11233799999777653 112 3888999988732 22222111 0 11
Q ss_pred CcccccccCcEEEEEEecCCCCCeEEEEEcCCC
Q 011049 172 GEEDINLNQLKILTSKESKTEITQYHILSWPLK 204 (494)
Q Consensus 172 ~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~ 204 (494)
....|+|++..++.... ...+-++++..+
T Consensus 338 ~~~~fsp~~~~ll~~~~----d~~~~~w~l~~~ 366 (456)
T KOG0266|consen 338 TSVQFSPNGKYLLSASL----DRTLKLWDLRSG 366 (456)
T ss_pred eEEEECCCCcEEEEecC----CCeEEEEEccCC
Confidence 23477888876665332 224444555443
No 306
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=92.36 E-value=0.41 Score=46.21 Aligned_cols=86 Identities=8% Similarity=-0.007 Sum_probs=50.7
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
+..|+.+++|. +.....++.......+-.++||||..||..+..+. --||+++.++. ...++-...+. +.
T Consensus 425 t~~G~w~V~d~---e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~--iyiy~Vs~~g~--~y~r~~k~~gs--~i- 494 (626)
T KOG2106|consen 425 TATGRWFVLDT---ETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNH--IYIYRVSANGR--KYSRVGKCSGS--PI- 494 (626)
T ss_pred eccceEEEEec---ccceeEEEEecCCceEEEEEcCCCCEEEEecCCCe--EEEEEECCCCc--EEEEeeeecCc--ee-
Confidence 34678899998 65444455445556667889999999998764322 33444444443 33333333321 00
Q ss_pred CCCCceeeCCCCCEEEEEE
Q 011049 95 PGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~ 113 (494)
.... ||+|++++.-.+
T Consensus 495 -thLD--wS~Ds~~~~~~S 510 (626)
T KOG2106|consen 495 -THLD--WSSDSQFLVSNS 510 (626)
T ss_pred -EEee--ecCCCceEEecc
Confidence 1122 999999876554
No 307
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=92.07 E-value=2.8 Score=40.88 Aligned_cols=80 Identities=8% Similarity=-0.016 Sum_probs=47.5
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
..|||+++ .+...+............+|+|+++.++.++-+. ...+-+.++.+. ..+..+.... ..
T Consensus 255 snLyl~~~---~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~--pa~~s~~~lr~N-----l~~~~Pe~~r----NT 320 (561)
T COG5354 255 SNLYLLRI---TERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYM--PASVSVFDLRGN-----LRFYFPEQKR----NT 320 (561)
T ss_pred ceEEEEee---cccccceeccccccceeeeecccCCceeEEeccc--ccceeecccccc-----eEEecCCccc----cc
Confidence 69999998 4333222222234456789999999999887332 234555555542 2222222110 33
Q ss_pred CceeeCCCCCEEEEEE
Q 011049 98 PMMTRTSTGTNVIAKI 113 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~ 113 (494)
++ +||-+++|++..
T Consensus 321 ~~--fsp~~r~il~ag 334 (561)
T COG5354 321 IF--FSPHERYILFAG 334 (561)
T ss_pred cc--ccCcccEEEEec
Confidence 34 899999998864
No 308
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=92.05 E-value=1.7 Score=39.71 Aligned_cols=67 Identities=19% Similarity=0.279 Sum_probs=36.8
Q ss_pred cccccccceecCCCceEEEEeeeeccceEEEEEcC-CCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEe
Q 011049 39 LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP-GSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 39 ~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~-~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~ 114 (494)
.....+...||.|||.|+-.+... --+||-++= ... +-|.+-..- .+..|. .+.++||.+.+++...
T Consensus 85 H~~~vt~~~FsSdGK~lat~~~Dr--~Ir~w~~~DF~~~--eHr~~R~nv---e~dhpT--~V~FapDc~s~vv~~~ 152 (420)
T KOG2096|consen 85 HKKEVTDVAFSSDGKKLATISGDR--SIRLWDVRDFENK--EHRCIRQNV---EYDHPT--RVVFAPDCKSVVVSVK 152 (420)
T ss_pred cCCceeeeEEcCCCceeEEEeCCc--eEEEEecchhhhh--hhhHhhccc---cCCCce--EEEECCCcceEEEEEc
Confidence 344566789999999999776422 345665531 111 222221111 111122 3348999998887664
No 309
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.98 E-value=0.49 Score=42.39 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
....++...+..++++. ...+|.++|||+||.+|..++..
T Consensus 109 ~~~~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 109 SLYNQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHHHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHH
Confidence 33445555555555442 24689999999999999887765
No 310
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=91.88 E-value=13 Score=41.64 Aligned_cols=29 Identities=10% Similarity=-0.091 Sum_probs=21.3
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+.+|+|||+.|++. +. .+++|++++++++
T Consensus 744 GIavspdG~~LYVA-Ds--~n~~Irv~D~~tg 772 (1057)
T PLN02919 744 GISLSPDLKELYIA-DS--ESSSIRALDLKTG 772 (1057)
T ss_pred EEEEeCCCCEEEEE-EC--CCCeEEEEECCCC
Confidence 46799999987654 32 2468999998865
No 311
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=91.81 E-value=9.5 Score=34.38 Aligned_cols=45 Identities=11% Similarity=-0.006 Sum_probs=34.5
Q ss_pred CCCCccceeeeccCCCCCCCCCeecccccccc-ccceecCCCceEEEEe
Q 011049 12 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRF-RSVSWCDDSLALVNET 59 (494)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~-~~p~wspDg~~i~f~~ 59 (494)
+-.++.+.+.++|+ .+|++++..-+-... -+.++|||.++|+--+
T Consensus 79 lS~swD~~lrlWDl---~~g~~t~~f~GH~~dVlsva~s~dn~qivSGS 124 (315)
T KOG0279|consen 79 LSASWDGTLRLWDL---ATGESTRRFVGHTKDVLSVAFSTDNRQIVSGS 124 (315)
T ss_pred EeccccceEEEEEe---cCCcEEEEEEecCCceEEEEecCCCceeecCC
Confidence 34567788999999 888888776655444 4789999999998655
No 312
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=91.38 E-value=3.8 Score=37.70 Aligned_cols=141 Identities=13% Similarity=0.075 Sum_probs=75.0
Q ss_pred CCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccC-CCCccCCCCchhHHHHHhCCeEEEeCCCCCCCC
Q 011049 232 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRG-SPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 310 (494)
Q Consensus 232 ~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 310 (494)
+++..+..|||.-..... ..+|+.+++.||+..+....+.+.. +|-.... .+.....|-......+. ..-..|
T Consensus 11 r~~a~~F~wly~~~~~~k---s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~-~~r~~TWlk~adllfvD--nPVGaG 84 (414)
T KOG1283|consen 11 RTGAHMFWWLYYATANVK---SERPLALWLQGGPGASSTGFGNFEELGPLDLDG-SPRDWTWLKDADLLFVD--NPVGAG 84 (414)
T ss_pred ecCceEEEEEeeeccccc---cCCCeeEEecCCCCCCCcCccchhhcCCcccCC-CcCCchhhhhccEEEec--CCCcCc
Confidence 467788899998654322 3389999999998665443332211 0100000 00011112223333332 211122
Q ss_pred CCCCCCC---chhHHHHHHHHHHHHHHHHH-cCCCCCCcEEEEecChHHHHHHHHHHhC------C---CceeEEEeCCC
Q 011049 311 EGDKLPN---DRFVEQLVSSAEAAVEEVVR-RGVADPSRIAVGGHSYGAFMTAHLLAHA------P---HLFCCGIARSG 377 (494)
Q Consensus 311 ~g~~~~~---~~~~~~~~~d~~~~v~~l~~-~~~~d~~ri~i~G~S~GG~~a~~~~~~~------p---~~~~a~v~~~~ 377 (494)
+..-... .....+...|+...++-+.. ++......+.|+..||||-+|..++..- . ..|.++++..+
T Consensus 85 fSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDS 164 (414)
T KOG1283|consen 85 FSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDS 164 (414)
T ss_pred eeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCc
Confidence 2111111 12245667788887765554 3445667899999999999998776532 1 13566666554
Q ss_pred C
Q 011049 378 S 378 (494)
Q Consensus 378 ~ 378 (494)
.
T Consensus 165 W 165 (414)
T KOG1283|consen 165 W 165 (414)
T ss_pred c
Confidence 4
No 313
>PRK02888 nitrous-oxide reductase; Validated
Probab=91.19 E-value=2.3 Score=43.32 Aligned_cols=136 Identities=9% Similarity=-0.023 Sum_probs=71.4
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
-++++.+-.+|. +..+...-..-+.......++|||++++.++........+-.++.... .....++.....
T Consensus 211 ~ey~~~vSvID~---etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~--d~~vvfni~~ie--- 282 (635)
T PRK02888 211 KKYRSLFTAVDA---ETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAER--DWVVVFNIARIE--- 282 (635)
T ss_pred cceeEEEEEEEC---ccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccC--ceEEEEchHHHH---
Confidence 567777777777 433322111122233455799999997766532222445666665433 333334333222
Q ss_pred CCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCC----C-ceEE-EEeeCcchhhhheeee
Q 011049 94 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT----G-SKER-IWESNREKYFETAVAL 167 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~----g-~~~~-l~~~~~~~~~~~~~~~ 167 (494)
. +.+||++..+.. .++.++|..+ + +... +..+...
T Consensus 283 --a-----~vkdGK~~~V~g-----------------------n~V~VID~~t~~~~~~~v~~yIPVGKsP--------- 323 (635)
T PRK02888 283 --E-----AVKAGKFKTIGG-----------------------SKVPVVDGRKAANAGSALTRYVPVPKNP--------- 323 (635)
T ss_pred --H-----hhhCCCEEEECC-----------------------CEEEEEECCccccCCcceEEEEECCCCc---------
Confidence 1 578888655421 1366777665 2 1111 2211111
Q ss_pred ccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 168 VFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 168 ~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
....+||||++++++.. ..+.+-++|...
T Consensus 324 ----HGV~vSPDGkylyVank---lS~tVSVIDv~k 352 (635)
T PRK02888 324 ----HGVNTSPDGKYFIANGK---LSPTVTVIDVRK 352 (635)
T ss_pred ----cceEECCCCCEEEEeCC---CCCcEEEEEChh
Confidence 23488999998876432 234566777654
No 314
>PLN02408 phospholipase A1
Probab=91.15 E-value=0.44 Score=45.23 Aligned_cols=40 Identities=15% Similarity=0.263 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
.+.+.+.|..++++..-.+.+|.|+|||+||.+|..++..
T Consensus 181 r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 181 QEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3445555666665532223479999999999999887764
No 315
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=91.03 E-value=5.4 Score=36.52 Aligned_cols=56 Identities=11% Similarity=0.025 Sum_probs=35.6
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+..|+|-++|..++. -.+.|+..--...+.+||+||+.|+-++ + ...+-.-|+-.|
T Consensus 42 c~nG~vvI~D~~T~~--iar~lsaH~~pi~sl~WS~dgr~LltsS-~---D~si~lwDl~~g 97 (405)
T KOG1273|consen 42 CANGRVVIYDFDTFR--IARMLSAHVRPITSLCWSRDGRKLLTSS-R---DWSIKLWDLLKG 97 (405)
T ss_pred ccCCcEEEEEccccc--hhhhhhccccceeEEEecCCCCEeeeec-C---CceeEEEeccCC
Confidence 455677788873332 3344666655667889999999877654 2 334555566655
No 316
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.60 E-value=0.53 Score=48.41 Aligned_cols=52 Identities=13% Similarity=0.164 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHcC----CCC---CCcEEEEecChHHHHHHHHHHhCCCceeEEE
Q 011049 321 VEQLVSSAEAAVEEVVRRG----VAD---PSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 373 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~----~~d---~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v 373 (494)
..+..+-+..||.++.+.. .-+ |..|.++||||||.+|..+++. |+..+..|
T Consensus 152 l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl-kn~~~~sV 210 (973)
T KOG3724|consen 152 LLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL-KNEVQGSV 210 (973)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh-hhhccchh
Confidence 3444556666777776542 123 6679999999999999877665 44444443
No 317
>PLN02571 triacylglycerol lipase
Probab=90.51 E-value=0.61 Score=45.03 Aligned_cols=40 Identities=20% Similarity=0.225 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
.+++.+.|..++++..-..-+|.|+|||+||.+|..+|..
T Consensus 207 r~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 207 RDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3445555555555432112369999999999999887764
No 318
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=90.02 E-value=9.9 Score=34.09 Aligned_cols=98 Identities=13% Similarity=0.061 Sum_probs=54.2
Q ss_pred eeccCCCCCCCCCeeccccccccccceecCCCceEEEEeee-eccceEEEEEcCCCCC-----CCceEeeecccccccCC
Q 011049 21 YTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY-KTSQTRTWLVCPGSKD-----VAPRVLFDRVFENVYSD 94 (494)
Q Consensus 21 ~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~-~~~~~~~~~~~~~~g~-----~~~~~lt~~~~~~~~~~ 94 (494)
-|||+ +.|+....-+.+...-...||++|..++++++. .+....|-+.++...+ .++......+...
T Consensus 77 kLWDv---~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~sk---- 149 (327)
T KOG0643|consen 77 KLWDV---ETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSK---- 149 (327)
T ss_pred EEEEc---CCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccc----
Confidence 45555 555544443443334455699999999999863 3335666666665221 1221111111110
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCc
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS 148 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~ 148 (494)
+. ...|+|-|+.|+..-. .+. |-.+|+.+|+
T Consensus 150 it--~a~Wg~l~~~ii~Ghe------------------~G~---is~~da~~g~ 180 (327)
T KOG0643|consen 150 IT--SALWGPLGETIIAGHE------------------DGS---ISIYDARTGK 180 (327)
T ss_pred ee--eeeecccCCEEEEecC------------------CCc---EEEEEcccCc
Confidence 11 2239999998887531 222 8888988875
No 319
>PLN02324 triacylglycerol lipase
Probab=89.96 E-value=0.72 Score=44.46 Aligned_cols=40 Identities=20% Similarity=0.265 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
.+.+.+.|..|+++..-..-+|.|+|||+||.+|..+|..
T Consensus 196 reqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 196 QEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3445555666666532112479999999999999887753
No 320
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=89.86 E-value=5.9 Score=35.08 Aligned_cols=88 Identities=10% Similarity=-0.022 Sum_probs=46.9
Q ss_pred ccceeeeccCCCCCCC-CCeeccccc-cccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 16 PRDIIYTQPAEPAEGE-KPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~-~~~~lt~~~-~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
..|+|+++|+ ... -..+|...+ ....+.+--|||+.++-..+++ +--+|.+.-...-.+...++......
T Consensus 144 qsg~irvWDl---~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG--~cyvW~l~~~~~~s~l~P~~k~~ah~--- 215 (311)
T KOG0315|consen 144 QSGNIRVWDL---GENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKG--NCYVWRLLNHQTASELEPVHKFQAHN--- 215 (311)
T ss_pred CCCcEEEEEc---cCCccccccCCCCCcceeeEEEcCCCcEEEEecCCc--cEEEEEccCCCccccceEhhheeccc---
Confidence 3568899998 333 223444433 3445788899999987654332 34455554322111222333322222
Q ss_pred CCCCCc-eeeCCCCCEEEEEE
Q 011049 94 DPGSPM-MTRTSTGTNVIAKI 113 (494)
Q Consensus 94 ~~~~~~-~~~spDG~~i~~~~ 113 (494)
+... -.+|||+++|+-.+
T Consensus 216 --~~il~C~lSPd~k~lat~s 234 (311)
T KOG0315|consen 216 --GHILRCLLSPDVKYLATCS 234 (311)
T ss_pred --ceEEEEEECCCCcEEEeec
Confidence 1111 12799999998765
No 321
>PLN02606 palmitoyl-protein thioesterase
Probab=89.29 E-value=3.5 Score=38.07 Aligned_cols=35 Identities=11% Similarity=0.153 Sum_probs=29.2
Q ss_pred CcEEEEecChHHHHHHHHHHhCCC--ceeEEEeCCCC
Q 011049 344 SRIAVGGHSYGAFMTAHLLAHAPH--LFCCGIARSGS 378 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~~p~--~~~a~v~~~~~ 378 (494)
+-+-++|+|.||.+.-.++.+.|+ .++-.|++++.
T Consensus 95 ~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 458899999999999999999876 47888877654
No 322
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=89.26 E-value=5.7 Score=37.15 Aligned_cols=86 Identities=9% Similarity=-0.113 Sum_probs=48.6
Q ss_pred CccceeeeccCCCCCCCCCee--ccccccc--cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI--LHKLDLR--FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~--lt~~~~~--~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
.-.+.||+.|+ ...+.-. .|..+.. ....+.++++.+++|-...+ ..+|++.|+..= +.++.-+..+
T Consensus 103 ~Lee~IyIydI---~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t--~GdV~l~d~~nl----~~v~~I~aH~ 173 (391)
T KOG2110|consen 103 CLEESIYIYDI---KDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTT--SGDVVLFDTINL----QPVNTINAHK 173 (391)
T ss_pred EEcccEEEEec---ccceeehhhhccCCCccceEeeccCCCCceEEecCCCC--CceEEEEEcccc----eeeeEEEecC
Confidence 34567999998 5444321 1221222 23344555677999976543 578999988743 3333333222
Q ss_pred ccCCCCCCceeeCCCCCEEEEEE
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
. .-..+.+||||..||-.+
T Consensus 174 ~----~lAalafs~~G~llATAS 192 (391)
T KOG2110|consen 174 G----PLAALAFSPDGTLLATAS 192 (391)
T ss_pred C----ceeEEEECCCCCEEEEec
Confidence 0 011234899999888765
No 323
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=89.00 E-value=0.81 Score=38.90 Aligned_cols=66 Identities=21% Similarity=0.287 Sum_probs=47.0
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC-CcEEEEEcCCCCCc--cCCcccHHHHHHHHHHHHHHh
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHG-ALSRLVLLPFEHHV--YAARENVMHVIWETDRWLQKY 482 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~--~~~~~~~~~~~~~~~~fl~~~ 482 (494)
++++|-+-|++|.++. +.|+..-........ .....++.+++||. |....-+...+..+.+|+.+|
T Consensus 134 ~taLlTVEGe~DDIsg--~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISG--PGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCc--chHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 4889999999999987 888765555444322 12356778899997 555555567888889998764
No 324
>PLN02802 triacylglycerol lipase
Probab=88.87 E-value=0.82 Score=45.09 Aligned_cols=39 Identities=23% Similarity=0.308 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 326 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 326 ~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
+++.+.|..+++...-..-+|.|+|||+||.+|..++..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 455566666665432122479999999999999877653
No 325
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=87.89 E-value=4.6 Score=41.44 Aligned_cols=64 Identities=11% Similarity=0.139 Sum_probs=39.6
Q ss_pred ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEE
Q 011049 36 LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 36 lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~ 112 (494)
|....++.+...|+|||.++.+.. +++|-+.|+.... +.+...+..+.. .. +..||||+.++..
T Consensus 10 llGTvyr~Gnl~ft~dG~sviSPv-----GNrvsv~dLknN~-S~Tl~~e~~~NI-----~~--ialSp~g~lllav 73 (893)
T KOG0291|consen 10 LLGTVYRAGNLVFTKDGNSVISPV-----GNRVSVFDLKNNK-SYTLPLETRYNI-----TR--IALSPDGTLLLAV 73 (893)
T ss_pred cccceeecCcEEECCCCCEEEecc-----CCEEEEEEccCCc-ceeEEeecCCce-----EE--EEeCCCceEEEEE
Confidence 334456677889999999988753 6788888887541 222222222211 12 2279999877655
No 326
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=87.40 E-value=2.9 Score=41.16 Aligned_cols=106 Identities=16% Similarity=0.079 Sum_probs=51.6
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCcc----CCCCchhHHHHHhCCeEEEeCCCCCCCCCCCC---CCCchhHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEF----SGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK---LPNDRFVEQLVSS 327 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~---~~~~~~~~~~~~d 327 (494)
.|+|+++-|||.++.-.....--+|.+. .+........|...+=.|+. |..-..|+..+ +....+ ...-.|
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFi-DqPvGTGfS~a~~~e~~~d~-~~~~~D 178 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFI-DQPVGTGFSRALGDEKKKDF-EGAGKD 178 (498)
T ss_pred CceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEE-ecCcccCcccccccccccch-hccchh
Confidence 8999999999855432111111122111 11111123355666666665 21112344432 111111 222334
Q ss_pred HHHHH----HHHHHcCCCCCCcEEEEecChHHHHHHHHHH
Q 011049 328 AEAAV----EEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 328 ~~~~v----~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
+..+. +++.+... .-.+..|+|.||||+-+..+|.
T Consensus 179 ~~~~~~~f~~~fp~~~r-~~~~~~L~GESYgg~yip~~A~ 217 (498)
T COG2939 179 VYSFLRLFFDKFPHYAR-LLSPKFLAGESYGGHYIPVFAH 217 (498)
T ss_pred HHHHHHHHHHHHHHHhh-hcCceeEeeccccchhhHHHHH
Confidence 44443 44444332 1247899999999987766654
No 327
>PLN02633 palmitoyl protein thioesterase family protein
Probab=87.09 E-value=6.3 Score=36.51 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=29.7
Q ss_pred CcEEEEecChHHHHHHHHHHhCCC--ceeEEEeCCCC
Q 011049 344 SRIAVGGHSYGAFMTAHLLAHAPH--LFCCGIARSGS 378 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~~p~--~~~a~v~~~~~ 378 (494)
+-+-++|+|.||.++-.++.+.|+ .++-.|++++.
T Consensus 94 ~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 458999999999999999999986 47888887654
No 328
>PLN00413 triacylglycerol lipase
Probab=86.80 E-value=1.3 Score=43.41 Aligned_cols=35 Identities=20% Similarity=0.363 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH
Q 011049 327 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 327 d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
.+...++.++++. ...+|.|+|||+||.+|..+++
T Consensus 269 ~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHH
Confidence 3444555555442 2357999999999999998774
No 329
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=86.65 E-value=33 Score=33.44 Aligned_cols=128 Identities=9% Similarity=0.027 Sum_probs=69.0
Q ss_pred ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccce
Q 011049 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~ 121 (494)
.-...+|+|||+.++..-.... ...+++++..+. +.+...+... .|.. +..+|||.+++....
T Consensus 117 ~P~~~~~~~~~~~vYV~n~~~~-~~~vsvid~~t~----~~~~~~~vG~---~P~~--~a~~p~g~~vyv~~~------- 179 (381)
T COG3391 117 GPVGLAVDPDGKYVYVANAGNG-NNTVSVIDAATN----KVTATIPVGN---TPTG--VAVDPDGNKVYVTNS------- 179 (381)
T ss_pred CCceEEECCCCCEEEEEecccC-CceEEEEeCCCC----eEEEEEecCC---Ccce--EEECCCCCeEEEEec-------
Confidence 3446789999998766533222 578999988765 2222222221 1222 227999998876541
Q ss_pred EEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEc
Q 011049 122 YILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 201 (494)
Q Consensus 122 ~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~ 201 (494)
....+..+|.++....+ ...... ......-....+++||.++++...... -..+..++.
T Consensus 180 -------------~~~~v~vi~~~~~~v~~-~~~~~~------~~~~~~P~~i~v~~~g~~~yV~~~~~~-~~~v~~id~ 238 (381)
T COG3391 180 -------------DDNTVSVIDTSGNSVVR-GSVGSL------VGVGTGPAGIAVDPDGNRVYVANDGSG-SNNVLKIDT 238 (381)
T ss_pred -------------CCCeEEEEeCCCcceec-cccccc------cccCCCCceEEECCCCCEEEEEeccCC-CceEEEEeC
Confidence 11137778866654433 222111 000011112377888887766554322 245777776
Q ss_pred CCCcee
Q 011049 202 PLKKSS 207 (494)
Q Consensus 202 ~~~~~~ 207 (494)
.++...
T Consensus 239 ~~~~v~ 244 (381)
T COG3391 239 ATGNVT 244 (381)
T ss_pred CCceEE
Confidence 665543
No 330
>PLN02753 triacylglycerol lipase
Probab=86.58 E-value=1.4 Score=43.77 Aligned_cols=39 Identities=23% Similarity=0.214 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHcCCCC---CCcEEEEecChHHHHHHHHHH
Q 011049 325 VSSAEAAVEEVVRRGVAD---PSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d---~~ri~i~G~S~GG~~a~~~~~ 363 (494)
.+.+.+.|+.|+++..-+ .-+|.|+|||.||.+|..+|.
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 445556666666543211 358999999999999988875
No 331
>PLN02310 triacylglycerol lipase
Probab=86.46 E-value=1.3 Score=42.81 Aligned_cols=21 Identities=24% Similarity=0.294 Sum_probs=18.0
Q ss_pred CcEEEEecChHHHHHHHHHHh
Q 011049 344 SRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~ 364 (494)
.+|.|+|||+||.+|..++..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 479999999999999877743
No 332
>PLN02761 lipase class 3 family protein
Probab=86.20 E-value=1.5 Score=43.52 Aligned_cols=39 Identities=26% Similarity=0.171 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHcCC---CC-CCcEEEEecChHHHHHHHHHH
Q 011049 325 VSSAEAAVEEVVRRGV---AD-PSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~---~d-~~ri~i~G~S~GG~~a~~~~~ 363 (494)
.+++.+.|..|++... -+ .-+|.|+|||+||.+|..+|.
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 3445556666655431 12 247999999999999987774
No 333
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=86.19 E-value=11 Score=39.68 Aligned_cols=92 Identities=9% Similarity=0.053 Sum_probs=51.6
Q ss_pred CCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC--ceeeCCCCC
Q 011049 30 GEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP--MMTRTSTGT 107 (494)
Q Consensus 30 ~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~--~~~~spDG~ 107 (494)
....+.+-..++......+.|.|+.||.++ . ++.|++.+++.+. ....++.-.....+.. ..+ ...|+|+|.
T Consensus 128 ~s~~~~lrgh~apVl~l~~~p~~~fLAvss---~-dG~v~iw~~~~~~-~~~tl~~v~k~n~~~~-s~i~~~~aW~Pk~g 201 (933)
T KOG1274|consen 128 SSQEKVLRGHDAPVLQLSYDPKGNFLAVSS---C-DGKVQIWDLQDGI-LSKTLTGVDKDNEFIL-SRICTRLAWHPKGG 201 (933)
T ss_pred cchheeecccCCceeeeeEcCCCCEEEEEe---c-CceEEEEEcccch-hhhhcccCCccccccc-cceeeeeeecCCCC
Confidence 344455556667777889999999888765 2 5578888887651 2233333222221110 111 123999965
Q ss_pred EEEEEEeccCccceEEEEccCCCC
Q 011049 108 NVIAKIKKENDEQIYILLNGRGFT 131 (494)
Q Consensus 108 ~i~~~~~~~~~~~~~~~~~~~g~~ 131 (494)
.+++-.. ++.+.+|+.+|+.
T Consensus 202 ~la~~~~----d~~Vkvy~r~~we 221 (933)
T KOG1274|consen 202 TLAVPPV----DNTVKVYSRKGWE 221 (933)
T ss_pred eEEeecc----CCeEEEEccCCce
Confidence 5555432 3444455555554
No 334
>PLN03037 lipase class 3 family protein; Provisional
Probab=86.14 E-value=1.2 Score=44.14 Aligned_cols=20 Identities=20% Similarity=0.297 Sum_probs=17.6
Q ss_pred CcEEEEecChHHHHHHHHHH
Q 011049 344 SRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~ 363 (494)
-+|.|+|||+||.+|..+|.
T Consensus 318 ~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAY 337 (525)
T ss_pred ceEEEeccCHHHHHHHHHHH
Confidence 47999999999999987774
No 335
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=86.12 E-value=6.4 Score=34.09 Aligned_cols=34 Identities=15% Similarity=0.117 Sum_probs=24.8
Q ss_pred CCcEEEEecChHHHHHHHHHHh---CCCceeEEEeCC
Q 011049 343 PSRIAVGGHSYGAFMTAHLLAH---APHLFCCGIARS 376 (494)
Q Consensus 343 ~~ri~i~G~S~GG~~a~~~~~~---~p~~~~a~v~~~ 376 (494)
..++.++|||+||.++..++.+ .+..+..++...
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~ 99 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLD 99 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEc
Confidence 3578999999999999888775 334555555443
No 336
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=86.03 E-value=1.4 Score=45.44 Aligned_cols=80 Identities=10% Similarity=-0.010 Sum_probs=46.5
Q ss_pred eeeeccCCCCCCCCCeeccc-cccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~-~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.|.++|. .+.+..|... ...+....+||||||||+-.+.. ..|.+-|+-++..-.-.+++.+ -
T Consensus 557 ~I~vvD~---~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD----~tIr~wDlpt~~lID~~~vd~~---------~ 620 (910)
T KOG1539|consen 557 SIRVVDV---VTRKVVREFWGHGNRITDMTFSPDGRWLISASMD----STIRTWDLPTGTLIDGLLVDSP---------C 620 (910)
T ss_pred eEEEEEc---hhhhhhHHhhccccceeeeEeCCCCcEEEEeecC----CcEEEEeccCcceeeeEecCCc---------c
Confidence 5667776 4445444443 44577788999999999977633 2344455554411111122111 1
Q ss_pred CceeeCCCCCEEEEEEe
Q 011049 98 PMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~~ 114 (494)
-.+.+||.|.+++-...
T Consensus 621 ~sls~SPngD~LAT~Hv 637 (910)
T KOG1539|consen 621 TSLSFSPNGDFLATVHV 637 (910)
T ss_pred eeeEECCCCCEEEEEEe
Confidence 12338999999988753
No 337
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=85.92 E-value=6.2 Score=39.67 Aligned_cols=67 Identities=9% Similarity=0.081 Sum_probs=32.7
Q ss_pred ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 36 LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 36 lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
||.+...+...+|-|=-.-++-++.++. --+||-+ ..+. ..-++..... +-+-+.|||||++++-.-
T Consensus 673 lt~h~eKI~slRfHPLAadvLa~asyd~-Ti~lWDl--~~~~-~~~~l~gHtd-------qIf~~AWSpdGr~~AtVc 739 (1012)
T KOG1445|consen 673 LTIHGEKITSLRFHPLAADVLAVASYDS-TIELWDL--ANAK-LYSRLVGHTD-------QIFGIAWSPDGRRIATVC 739 (1012)
T ss_pred eecccceEEEEEecchhhhHhhhhhccc-eeeeeeh--hhhh-hhheeccCcC-------ceeEEEECCCCcceeeee
Confidence 4555555566777774433333333433 3455544 4331 1112222211 112234999999998664
No 338
>KOG1520 consensus Predicted alkaloid synthase/Surface mucin Hemomucin [General function prediction only]
Probab=85.56 E-value=8 Score=36.72 Aligned_cols=129 Identities=15% Similarity=0.145 Sum_probs=64.4
Q ss_pred ceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccce-EEE
Q 011049 46 VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI-YIL 124 (494)
Q Consensus 46 p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~-~~~ 124 (494)
.+|..-|..++.. + . .--|+.++.+++ .++.++++......-..+... ..|+| .|+|+.+....... .++
T Consensus 120 l~f~~~ggdL~Va-D--A-YlGL~~V~p~g~--~a~~l~~~~~G~~~kf~N~ld--I~~~g-~vyFTDSSsk~~~rd~~~ 190 (376)
T KOG1520|consen 120 IRFDKKGGDLYVA-D--A-YLGLLKVGPEGG--LAELLADEAEGKPFKFLNDLD--IDPEG-VVYFTDSSSKYDRRDFVF 190 (376)
T ss_pred EEeccCCCeEEEE-e--c-ceeeEEECCCCC--cceeccccccCeeeeecCcee--EcCCC-eEEEeccccccchhheEE
Confidence 4577766554433 3 1 234888888887 566666554321111112222 35645 46776543222222 222
Q ss_pred EccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEE
Q 011049 125 LNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHIL 199 (494)
Q Consensus 125 ~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~ 199 (494)
.-..| .+.+ ++.++|..+++.+.|-..- +| .+...+|+|+..+++...+...-..+|+-
T Consensus 191 a~l~g-~~~G---Rl~~YD~~tK~~~VLld~L---~F---------~NGlaLS~d~sfvl~~Et~~~ri~rywi~ 249 (376)
T KOG1520|consen 191 AALEG-DPTG---RLFRYDPSTKVTKVLLDGL---YF---------PNGLALSPDGSFVLVAETTTARIKRYWIK 249 (376)
T ss_pred eeecC-CCcc---ceEEecCcccchhhhhhcc---cc---------cccccCCCCCCEEEEEeeccceeeeeEec
Confidence 11222 1223 3888998887654443211 11 23348899998777755443333445543
No 339
>PLN02162 triacylglycerol lipase
Probab=85.38 E-value=1.7 Score=42.44 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH
Q 011049 326 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 326 ~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
..+...++.+.++. ...++.++|||.||.+|..+++
T Consensus 262 ~~I~~~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARN--KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhC--CCceEEEEecChHHHHHHHHHH
Confidence 34444554444432 2368999999999999988654
No 340
>PLN02934 triacylglycerol lipase
Probab=85.22 E-value=1.7 Score=42.92 Aligned_cols=36 Identities=14% Similarity=0.337 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH
Q 011049 326 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 326 ~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
..+...++.+.++. ...+|.++|||.||.+|..+++
T Consensus 305 ~~v~~~lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEH--KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHC--CCCeEEEeccccHHHHHHHHHH
Confidence 34556666666553 1358999999999999988864
No 341
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=85.20 E-value=6.7 Score=35.15 Aligned_cols=62 Identities=13% Similarity=0.141 Sum_probs=37.2
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEe
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~ 114 (494)
..+.+|||.|+.|+-.+...+ .-||.-. ++ +-+.+..-++.++. ---+.||++|.+||-.++
T Consensus 64 VRsvAwsp~g~~La~aSFD~t--~~Iw~k~--~~--efecv~~lEGHEnE----VK~Vaws~sG~~LATCSR 125 (312)
T KOG0645|consen 64 VRSVAWSPHGRYLASASFDAT--VVIWKKE--DG--EFECVATLEGHENE----VKCVAWSASGNYLATCSR 125 (312)
T ss_pred eeeeeecCCCcEEEEeeccce--EEEeecC--CC--ceeEEeeeeccccc----eeEEEEcCCCCEEEEeeC
Confidence 346789999998886654322 3344332 33 44555554444421 112349999999998763
No 342
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=84.73 E-value=24 Score=36.46 Aligned_cols=44 Identities=14% Similarity=0.088 Sum_probs=30.1
Q ss_pred CCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCC
Q 011049 29 EGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 74 (494)
Q Consensus 29 ~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~ 74 (494)
+++..+.|....+...+-+||||-+.|+-.|. +. .-++|-++.-
T Consensus 440 ~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSE-D~-svRLWsl~t~ 483 (707)
T KOG0263|consen 440 SSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSE-DS-SVRLWSLDTW 483 (707)
T ss_pred CCceeEEeecCCCceeeeeecccccceeeccC-Cc-ceeeeecccc
Confidence 44566667776666667789999998776553 22 4678887643
No 343
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=84.32 E-value=4.4 Score=37.05 Aligned_cols=81 Identities=12% Similarity=0.072 Sum_probs=44.6
Q ss_pred ceeeeccCCCCCCCCCee-cc-ccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 18 DIIYTQPAEPAEGEKPEI-LH-KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~-lt-~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
|.|-+|.+ .+|..-+ .- .........+||.|+..|+-.+.. .-+-+.-+..| +.|.+..+...|.
T Consensus 285 GkIKvWri---~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD----~tvRiHGlKSG----K~LKEfrGHsSyv-- 351 (508)
T KOG0275|consen 285 GKIKVWRI---ETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFD----QTVRIHGLKSG----KCLKEFRGHSSYV-- 351 (508)
T ss_pred CcEEEEEE---ecchHHHHhhhhhccCeeEEEEccCcchhhccccc----ceEEEeccccc----hhHHHhcCccccc--
Confidence 45555555 4454322 22 111224567899999998865421 22444555655 5666655543332
Q ss_pred CCCceeeCCCCCEEEEEE
Q 011049 96 GSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~ 113 (494)
.... +++||.+|+-.+
T Consensus 352 n~a~--ft~dG~~iisaS 367 (508)
T KOG0275|consen 352 NEAT--FTDDGHHIISAS 367 (508)
T ss_pred cceE--EcCCCCeEEEec
Confidence 2223 788998887655
No 344
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=84.22 E-value=26 Score=39.30 Aligned_cols=81 Identities=11% Similarity=0.106 Sum_probs=43.5
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccc-----------cccCCCCCCceeeCCCCCEEEEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE-----------NVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~-----------~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
..+++|++..|+++ .. .+.+||+++..++ ..+.+. ..+. ..+..|.. +.++|||++|++..
T Consensus 687 gVa~dp~~g~LyVa-d~--~~~~I~v~d~~~g--~v~~~~-G~G~~~~~~g~~~~~~~~~~P~G--IavspdG~~LYVAD 758 (1057)
T PLN02919 687 DVCFEPVNEKVYIA-MA--GQHQIWEYNISDG--VTRVFS-GDGYERNLNGSSGTSTSFAQPSG--ISLSPDLKELYIAD 758 (1057)
T ss_pred EEEEecCCCeEEEE-EC--CCCeEEEEECCCC--eEEEEe-cCCccccCCCCccccccccCccE--EEEeCCCCEEEEEE
Confidence 35788876655543 32 2568999988765 222211 1110 00111222 34789998776653
Q ss_pred eccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEE
Q 011049 114 KKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW 153 (494)
Q Consensus 114 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~ 153 (494)
. ....|.++|++++....+.
T Consensus 759 s--------------------~n~~Irv~D~~tg~~~~~~ 778 (1057)
T PLN02919 759 S--------------------ESSSIRALDLKTGGSRLLA 778 (1057)
T ss_pred C--------------------CCCeEEEEECCCCcEEEEE
Confidence 2 1124888888877654443
No 345
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=83.95 E-value=4.5 Score=39.47 Aligned_cols=45 Identities=16% Similarity=0.254 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCC
Q 011049 321 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 367 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~ 367 (494)
.++....+..-++.+.+.. ..++|.|++|||||.+..+.+..+++
T Consensus 161 rd~yl~kLK~~iE~~~~~~--G~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 161 RDQYLSKLKKKIETMYKLN--GGKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred HHHHHHHHHHHHHHHHHHc--CCCceEEEecCCccHHHHHHHhcccc
Confidence 3445666667777666542 13899999999999999999988866
No 346
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=83.45 E-value=11 Score=36.02 Aligned_cols=54 Identities=15% Similarity=0.100 Sum_probs=34.9
Q ss_pred CCccceeeeccCCCCCCCC-CeeccccccccccceecCCCceEEEEeeeeccceEEEEEc
Q 011049 14 VSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 72 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~-~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~ 72 (494)
-+..|.+=++++ ++.. ...|+....+.+..+|-|+|+.|+-.+. +. --++|-+.
T Consensus 237 ~s~Dgtvklw~~---~~e~~l~~l~gH~~RVs~VafHPsG~~L~Tasf-D~-tWRlWD~~ 291 (459)
T KOG0272|consen 237 ASADGTVKLWKL---SQETPLQDLEGHLARVSRVAFHPSGKFLGTASF-DS-TWRLWDLE 291 (459)
T ss_pred eccCCceeeecc---CCCcchhhhhcchhhheeeeecCCCceeeeccc-cc-chhhcccc
Confidence 345556666666 4433 3457777788889999999999886553 22 34566443
No 347
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=83.39 E-value=6 Score=36.38 Aligned_cols=33 Identities=9% Similarity=0.174 Sum_probs=23.9
Q ss_pred ccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
..-+-.|||||.-|+-.+..+. -.+|-++.+..
T Consensus 51 f~kgckWSPDGSciL~~sedn~--l~~~nlP~dly 83 (406)
T KOG2919|consen 51 FLKGCKWSPDGSCILSLSEDNC--LNCWNLPFDLY 83 (406)
T ss_pred hhccceeCCCCceEEeecccCe--eeEEecChhhc
Confidence 3446689999999988765544 67888877654
No 348
>PLN02719 triacylglycerol lipase
Probab=83.22 E-value=2.4 Score=41.95 Aligned_cols=39 Identities=23% Similarity=0.228 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHcCCC---CCCcEEEEecChHHHHHHHHHH
Q 011049 325 VSSAEAAVEEVVRRGVA---DPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~---d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
.+++.+.|..|+++..- ..-+|.|+|||+||.+|..+|.
T Consensus 276 ReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 276 REQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 44555666666654321 1247999999999999988774
No 349
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=83.00 E-value=3.5 Score=43.79 Aligned_cols=92 Identities=12% Similarity=0.071 Sum_probs=47.6
Q ss_pred CCCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc-c
Q 011049 13 EVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN-V 91 (494)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~-~ 91 (494)
-.+..+.|-+++.-++ ...+++-....-.-+.+|-|=||+|+-.++.. --.+|... +-+ -.+.+|...... .
T Consensus 146 S~s~DnsViiwn~~tF--~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDr--tikvwrt~-dw~--i~k~It~pf~~~~~ 218 (942)
T KOG0973|consen 146 SVSLDNSVIIWNAKTF--ELLKVLRGHQSLVKGVSWDPIGKYFASQSDDR--TLKVWRTS-DWG--IEKSITKPFEESPL 218 (942)
T ss_pred EecccceEEEEccccc--eeeeeeecccccccceEECCccCeeeeecCCc--eEEEEEcc-cce--eeEeeccchhhCCC
Confidence 3455556666666222 22223322323334678999999888765432 45777743 122 334454432211 0
Q ss_pred cCCCCCCceeeCCCCCEEEEEE
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~ 113 (494)
+.....+. |||||++|+...
T Consensus 219 ~T~f~RlS--WSPDG~~las~n 238 (942)
T KOG0973|consen 219 TTFFLRLS--WSPDGHHLASPN 238 (942)
T ss_pred cceeeecc--cCCCcCeecchh
Confidence 00112223 999999997644
No 350
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=82.77 E-value=15 Score=33.80 Aligned_cols=87 Identities=7% Similarity=0.008 Sum_probs=45.9
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEc--CCCCCCCceEeeecccccccCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC--PGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~--~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
..|-|+++ .|.....+-.....+..-+-||||+.|+..... ..-.+|-+- -+|.=.+.++++.-.+..-
T Consensus 209 t~i~lw~l---kGq~L~~idtnq~~n~~aavSP~GRFia~~gFT--pDVkVwE~~f~kdG~fqev~rvf~LkGH~s---- 279 (420)
T KOG2096|consen 209 TKICLWDL---KGQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFT--PDVKVWEPIFTKDGTFQEVKRVFSLKGHQS---- 279 (420)
T ss_pred CcEEEEec---CCceeeeeccccccccceeeCCCCcEEEEecCC--CCceEEEEEeccCcchhhhhhhheeccchh----
Confidence 36677777 543333343444455667899999998865421 122333221 1222235555555554321
Q ss_pred CCCceeeCCCCCEEEEEE
Q 011049 96 GSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~ 113 (494)
+--..++||+.++++-.+
T Consensus 280 aV~~~aFsn~S~r~vtvS 297 (420)
T KOG2096|consen 280 AVLAAAFSNSSTRAVTVS 297 (420)
T ss_pred heeeeeeCCCcceeEEEe
Confidence 111234788887776654
No 351
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=82.67 E-value=2.9 Score=35.70 Aligned_cols=54 Identities=19% Similarity=0.199 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh--C----CCceeEEEeCCC
Q 011049 322 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH--A----PHLFCCGIARSG 377 (494)
Q Consensus 322 ~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~--~----p~~~~a~v~~~~ 377 (494)
...+.++...++...++- -..+|+|+|+|.|+.++..++.. . .+++++++++.-
T Consensus 61 ~~G~~~~~~~i~~~~~~C--P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGd 120 (179)
T PF01083_consen 61 AAGVANLVRLIEEYAARC--PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGD 120 (179)
T ss_dssp HHHHHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-
T ss_pred HHHHHHHHHHHHHHHHhC--CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecC
Confidence 344566666665555542 13699999999999999999887 2 246778777654
No 352
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=82.59 E-value=4 Score=41.83 Aligned_cols=109 Identities=15% Similarity=0.157 Sum_probs=63.1
Q ss_pred CCCeecccccccccc-ceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC--ceeeCCCCC
Q 011049 31 EKPEILHKLDLRFRS-VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP--MMTRTSTGT 107 (494)
Q Consensus 31 ~~~~~lt~~~~~~~~-p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~--~~~~spDG~ 107 (494)
..|.|+..+...+-. .+|-|.+.+++--+.. +--++|-+.. | ...+++... ..| .+++||+|+
T Consensus 525 ~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD--~tVRlWDv~~--G--~~VRiF~GH--------~~~V~al~~Sp~Gr 590 (707)
T KOG0263|consen 525 NKPLRIFAGHLSDVDCVSFHPNSNYVATGSSD--RTVRLWDVST--G--NSVRIFTGH--------KGPVTALAFSPCGR 590 (707)
T ss_pred CCchhhhcccccccceEEECCcccccccCCCC--ceEEEEEcCC--C--cEEEEecCC--------CCceEEEEEcCCCc
Confidence 566677777666554 6799998776643321 1346666543 3 557777543 233 345899999
Q ss_pred EEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEE
Q 011049 108 NVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILT 185 (494)
Q Consensus 108 ~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~ 185 (494)
+|+-.. +.. .|-+||+.+|+......... +...+.+||.||..++.
T Consensus 591 ~LaSg~-------------------ed~--~I~iWDl~~~~~v~~l~~Ht-----------~ti~SlsFS~dg~vLas 636 (707)
T KOG0263|consen 591 YLASGD-------------------EDG--LIKIWDLANGSLVKQLKGHT-----------GTIYSLSFSRDGNVLAS 636 (707)
T ss_pred eEeecc-------------------cCC--cEEEEEcCCCcchhhhhccc-----------CceeEEEEecCCCEEEe
Confidence 887643 122 27778888875422111111 01123488999986654
No 353
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=82.56 E-value=14 Score=32.54 Aligned_cols=104 Identities=16% Similarity=0.227 Sum_probs=59.1
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEE--EEEcCCCCCCCc-eEeeecccccccCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRT--WLVCPGSKDVAP-RVLFDRVFENVYSD 94 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~--~~~~~~~g~~~~-~~lt~~~~~~~~~~ 94 (494)
+.||.+-+ ++++..+-..-..-.+..|+-|-|.++|+-.. +-++ |-++..+|.... +.+++-....
T Consensus 139 g~Ly~~~~----~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsl---n~~V~a~dyd~~tG~~snr~~i~dlrk~~---- 207 (310)
T KOG4499|consen 139 GELYSWLA----GHQVELIWNCVGISNGLAWDSDAKKFYYIDSL---NYEVDAYDYDCPTGDLSNRKVIFDLRKSQ---- 207 (310)
T ss_pred cEEEEecc----CCCceeeehhccCCccccccccCcEEEEEccC---ceEEeeeecCCCcccccCcceeEEeccCC----
Confidence 35666544 56766666655555678999999999987543 3455 787888875433 3454433221
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCce
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSK 149 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~ 149 (494)
|-.+ .-|||..| - .+.+.++- .- .+. .++.+|+.+|+.
T Consensus 208 ~~e~---~~PDGm~I--D----~eG~L~Va-~~-----ng~--~V~~~dp~tGK~ 245 (310)
T KOG4499|consen 208 PFES---LEPDGMTI--D----TEGNLYVA-TF-----NGG--TVQKVDPTTGKI 245 (310)
T ss_pred CcCC---CCCCcceE--c----cCCcEEEE-Ee-----cCc--EEEEECCCCCcE
Confidence 1111 36888765 1 11122221 11 112 388888888874
No 354
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=82.55 E-value=3.8 Score=41.44 Aligned_cols=70 Identities=13% Similarity=0.117 Sum_probs=42.3
Q ss_pred hhHHHHHhCCeEEEeCCCCCCCCCCCCCCC----chhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH
Q 011049 288 TSSLIFLARRFAVLAGPSIPIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 288 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~----~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
.....|+..||.-. . ..+....+.. ....+..+..+...|+.+.+.. ..+++.|+||||||.+++.++.
T Consensus 160 kLIe~L~~iGY~~~---n--L~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 160 VLIANLARIGYEEK---N--MYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred HHHHHHHHcCCCCC---c--eeecccccccCccchhhhhHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHHHH
Confidence 35567888999721 1 1121112111 1112344566777777776542 1378999999999999998876
Q ss_pred h
Q 011049 364 H 364 (494)
Q Consensus 364 ~ 364 (494)
.
T Consensus 233 w 233 (642)
T PLN02517 233 W 233 (642)
T ss_pred h
Confidence 3
No 355
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=81.88 E-value=13 Score=36.96 Aligned_cols=65 Identities=9% Similarity=0.054 Sum_probs=42.5
Q ss_pred cccccceecCCCceEEEEeeee-ccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 41 LRFRSVSWCDDSLALVNETWYK-TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 41 ~~~~~p~wspDg~~i~f~~~~~-~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
...-.++|-|-|..++..+-.. ...-+.|-+....+ .++.+...+..- .+ .+.|||.|++++...
T Consensus 446 e~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~--~~~lVk~~dk~~-----~N-~vfwsPkG~fvvva~ 511 (698)
T KOG2314|consen 446 ESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIK--KPSLVKELDKKF-----AN-TVFWSPKGRFVVVAA 511 (698)
T ss_pred hheeeeeeccCCCeEEEEEccccccceeEEEeecCCC--chhhhhhhcccc-----cc-eEEEcCCCcEEEEEE
Confidence 3445678999999988877422 12467777776555 666665544321 11 233999999998876
No 356
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=80.95 E-value=28 Score=38.37 Aligned_cols=77 Identities=9% Similarity=0.104 Sum_probs=45.3
Q ss_pred ccceecCCCceEEEEeee--eccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccce
Q 011049 44 RSVSWCDDSLALVNETWY--KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 121 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~--~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~ 121 (494)
...+|-.||+++|.++-. .+....+-+.+-+| + ..-+.++... -...+.|.|.|..|+-... ...+..
T Consensus 213 ~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~ReG---~-L~stSE~v~g-----Le~~l~WrPsG~lIA~~q~-~~~~~~ 282 (928)
T PF04762_consen 213 VRISWRGDGEYFAVSSVEPETGSRRVIRVYSREG---E-LQSTSEPVDG-----LEGALSWRPSGNLIASSQR-LPDRHD 282 (928)
T ss_pred eEEEECCCCcEEEEEEEEcCCCceeEEEEECCCc---e-EEeccccCCC-----ccCCccCCCCCCEEEEEEE-cCCCcE
Confidence 345699999998887652 11123444444443 2 2233333332 2223449999998887764 444566
Q ss_pred EEEEccCCC
Q 011049 122 YILLNGRGF 130 (494)
Q Consensus 122 ~~~~~~~g~ 130 (494)
.++|.++|-
T Consensus 283 VvFfErNGL 291 (928)
T PF04762_consen 283 VVFFERNGL 291 (928)
T ss_pred EEEEecCCc
Confidence 778888774
No 357
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=79.88 E-value=7.5 Score=40.41 Aligned_cols=65 Identities=15% Similarity=0.085 Sum_probs=40.1
Q ss_pred eeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCccccccc
Q 011049 100 MTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLN 179 (494)
Q Consensus 100 ~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d 179 (494)
+++||||++|+..++ +. .|.++|+-++........+.. -...++||.
T Consensus 582 ~~FS~DgrWlisasm------------------D~---tIr~wDlpt~~lID~~~vd~~------------~~sls~SPn 628 (910)
T KOG1539|consen 582 MTFSPDGRWLISASM------------------DS---TIRTWDLPTGTLIDGLLVDSP------------CTSLSFSPN 628 (910)
T ss_pred eEeCCCCcEEEEeec------------------CC---cEEEEeccCcceeeeEecCCc------------ceeeEECCC
Confidence 348999999998763 12 288899988765432222211 113478899
Q ss_pred CcEEEEEEecCCCCCeEEEEE
Q 011049 180 QLKILTSKESKTEITQYHILS 200 (494)
Q Consensus 180 ~~~~~~~~~s~~~p~~l~~~~ 200 (494)
|..++.+.... ..||++.
T Consensus 629 gD~LAT~Hvd~---~gIylWs 646 (910)
T KOG1539|consen 629 GDFLATVHVDQ---NGIYLWS 646 (910)
T ss_pred CCEEEEEEecC---ceEEEEE
Confidence 88777665432 2455554
No 358
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=79.86 E-value=30 Score=35.27 Aligned_cols=42 Identities=10% Similarity=0.065 Sum_probs=25.5
Q ss_pred eEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecC
Q 011049 139 LDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK 190 (494)
Q Consensus 139 l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~ 190 (494)
+...+..+++.+++...+.. +.-..+.|+||++++++..+.|
T Consensus 482 ~~~~~~~~g~~~rf~~~P~g----------aE~tG~~fspDg~tlFvniQHP 523 (524)
T PF05787_consen 482 VWAYDPDTGELKRFLVGPNG----------AEITGPCFSPDGRTLFVNIQHP 523 (524)
T ss_pred eeeccccccceeeeccCCCC----------cccccceECCCCCEEEEEEeCC
Confidence 44456666666665543321 1112358999999998877754
No 359
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=79.24 E-value=12 Score=34.38 Aligned_cols=35 Identities=14% Similarity=0.135 Sum_probs=26.1
Q ss_pred CcEEEEecChHHHHHHHHHHhCCC-ceeEEEeCCCC
Q 011049 344 SRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGS 378 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~~p~-~~~a~v~~~~~ 378 (494)
+-+-++|+|.||.+.-.++.+.|+ .++-.|++++.
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 568999999999999999998864 57888877654
No 360
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=79.01 E-value=7 Score=38.79 Aligned_cols=83 Identities=10% Similarity=0.089 Sum_probs=50.3
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
..|..++. -+|+..+............|||..+.|+.+--+...+-.||.++. .+++....+... .-
T Consensus 368 ~~i~fwn~---~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps------~~~~~~l~gH~~----RV 434 (484)
T KOG0305|consen 368 RCIKFWNT---NTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS------MKLVAELLGHTS----RV 434 (484)
T ss_pred cEEEEEEc---CCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc------cceeeeecCCcc----ee
Confidence 36777777 556655555555677889999999999876543322456777753 233333322210 11
Q ss_pred CceeeCCCCCEEEEEE
Q 011049 98 PMMTRTSTGTNVIAKI 113 (494)
Q Consensus 98 ~~~~~spDG~~i~~~~ 113 (494)
..+.|||||..|+...
T Consensus 435 l~la~SPdg~~i~t~a 450 (484)
T KOG0305|consen 435 LYLALSPDGETIVTGA 450 (484)
T ss_pred EEEEECCCCCEEEEec
Confidence 1123899999988765
No 361
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=78.66 E-value=63 Score=30.90 Aligned_cols=78 Identities=12% Similarity=0.070 Sum_probs=47.8
Q ss_pred CccceeeeccCCCCCCCCCe-eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~-~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+....|.+|++ ++|+.. .|. .+....+..|+-||..|+-++. ...|-++|...+ +.+.+.....
T Consensus 151 g~Dn~v~iWnv---~tgeali~l~-hpd~i~S~sfn~dGs~l~Ttck----DKkvRv~dpr~~----~~v~e~~~he--- 215 (472)
T KOG0303|consen 151 GSDNTVSIWNV---GTGEALITLD-HPDMVYSMSFNRDGSLLCTTCK----DKKVRVIDPRRG----TVVSEGVAHE--- 215 (472)
T ss_pred cCCceEEEEec---cCCceeeecC-CCCeEEEEEeccCCceeeeecc----cceeEEEcCCCC----cEeeeccccc---
Confidence 44558899999 666543 344 4555667899999998886552 346778888766 4444443222
Q ss_pred CCCCCceeeCCCCC
Q 011049 94 DPGSPMMTRTSTGT 107 (494)
Q Consensus 94 ~~~~~~~~~spDG~ 107 (494)
+.......|--+|+
T Consensus 216 G~k~~Raifl~~g~ 229 (472)
T KOG0303|consen 216 GAKPARAIFLASGK 229 (472)
T ss_pred CCCcceeEEeccCc
Confidence 11222333777776
No 362
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=78.55 E-value=8 Score=41.36 Aligned_cols=49 Identities=8% Similarity=-0.096 Sum_probs=28.6
Q ss_pred CCCCCCCccceeeeccCCCCCCCC-CeeccccccccccceecCCCceEEEEee
Q 011049 9 DANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALVNETW 60 (494)
Q Consensus 9 ~~~~~~~~~~~i~~~~~~~~~~~~-~~~lt~~~~~~~~p~wspDg~~i~f~~~ 60 (494)
+..+.-++....++.++ ..+. .......+...+-..|||.|+.|+|+..
T Consensus 118 ~~~~rhs~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~wsp~~~~l~yv~~ 167 (755)
T KOG2100|consen 118 KKRFRHSYTAKYHLYDL---NTGEKLHPPEYEGSKIQYASWSPLGNDLAYVLH 167 (755)
T ss_pred ccccceeeEEEEEEEEc---CCCCcccCcccCCCeeEEEEEcCCCCEEEEEEe
Confidence 44455555566666666 3333 1122222223355789999999999864
No 363
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=78.17 E-value=4.1 Score=38.86 Aligned_cols=36 Identities=19% Similarity=0.214 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 327 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 327 d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
.+.+.++.|+++.. .-+|.+.|||+||.+|..+|..
T Consensus 156 ~~~~~~~~L~~~~~--~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 156 GLDAELRRLIELYP--NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHhcC--CcEEEEecCChHHHHHHHHHHH
Confidence 33444555555432 4689999999999999887754
No 364
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=77.63 E-value=39 Score=37.18 Aligned_cols=43 Identities=23% Similarity=0.224 Sum_probs=30.4
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEe
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNET 59 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~ 59 (494)
+...|+|-+.|. +..........+......+||||++.+++++
T Consensus 86 ~~~~G~iilvd~---et~~~eivg~vd~GI~aaswS~Dee~l~liT 128 (1265)
T KOG1920|consen 86 ITALGDIILVDP---ETLELEIVGNVDNGISAASWSPDEELLALIT 128 (1265)
T ss_pred EecCCcEEEEcc---cccceeeeeeccCceEEEeecCCCcEEEEEe
Confidence 455566666666 5555555555555666778999999999987
No 365
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=77.27 E-value=60 Score=29.86 Aligned_cols=87 Identities=13% Similarity=0.047 Sum_probs=47.0
Q ss_pred ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEec
Q 011049 36 LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 115 (494)
Q Consensus 36 lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~ 115 (494)
+...++......|+|||..|+-. +...+|++-.+.+.-...-.++-..+..+ -+-|++||+.|+-..
T Consensus 43 l~gh~geI~~~~F~P~gs~~aSg----G~Dr~I~LWnv~gdceN~~~lkgHsgAVM-------~l~~~~d~s~i~S~g-- 109 (338)
T KOG0265|consen 43 LPGHKGEIYTIKFHPDGSCFASG----GSDRAIVLWNVYGDCENFWVLKGHSGAVM-------ELHGMRDGSHILSCG-- 109 (338)
T ss_pred cCCCcceEEEEEECCCCCeEeec----CCcceEEEEeccccccceeeeccccceeE-------eeeeccCCCEEEEec--
Confidence 34445566677899999876532 22334444444432001122332222221 123899998766543
Q ss_pred cCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEe
Q 011049 116 ENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 154 (494)
Q Consensus 116 ~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 154 (494)
.+. +++.+|+++|+..+-..
T Consensus 110 -----------------tDk--~v~~wD~~tG~~~rk~k 129 (338)
T KOG0265|consen 110 -----------------TDK--TVRGWDAETGKRIRKHK 129 (338)
T ss_pred -----------------CCc--eEEEEecccceeeehhc
Confidence 112 48999999998665433
No 366
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=77.10 E-value=42 Score=31.24 Aligned_cols=45 Identities=24% Similarity=0.169 Sum_probs=35.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 319 RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 319 ~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
.+...+...+..|..+|++.... .++|+++|+|-|++.+-.+|..
T Consensus 98 mFg~gL~~nI~~AYrFL~~~yep-GD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 98 MFGQGLVQNIREAYRFLIFNYEP-GDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC-CCeEEEeeccchhHHHHHHHHH
Confidence 34455677888999999987543 4799999999999999776654
No 367
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=76.84 E-value=8.9 Score=37.13 Aligned_cols=83 Identities=14% Similarity=0.042 Sum_probs=51.7
Q ss_pred CccceeeeccCCCCCCCCCe-eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~-~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+..+.|=++|+ +.+.+. .+++.....+..+|||||+++++-+. ...|-+-+...+ .++.....+.
T Consensus 429 s~dstV~lwdv---~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~----dg~V~iws~~~~-----~l~~s~~~~~-- 494 (524)
T KOG0273|consen 429 SFDSTVKLWDV---ESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSL----DGCVHIWSTKTG-----KLVKSYQGTG-- 494 (524)
T ss_pred ecCCeEEEEEc---cCCceeEeeccCCCceEEEEecCCCcEEEecCC----CCeeEeccccch-----heeEeecCCC--
Confidence 34456667777 555554 46677777778899999999997542 233444444433 2333333321
Q ss_pred CCCCCceeeCCCCCEEEEEE
Q 011049 94 DPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~~ 113 (494)
+-..+||+-+|.+|....
T Consensus 495 --~Ifel~Wn~~G~kl~~~~ 512 (524)
T KOG0273|consen 495 --GIFELCWNAAGDKLGACA 512 (524)
T ss_pred --eEEEEEEcCCCCEEEEEe
Confidence 224577999999887765
No 368
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=76.81 E-value=57 Score=29.40 Aligned_cols=117 Identities=14% Similarity=0.189 Sum_probs=63.2
Q ss_pred cccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccc
Q 011049 41 LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQ 120 (494)
Q Consensus 41 ~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~ 120 (494)
....+..|.-||..++-.+... .-.+|-++.. +.+++......-.+ .. -++|.|--.-++++...
T Consensus 21 ~~v~Sv~wn~~g~~lasgs~dk--tv~v~n~e~~------r~~~~~~~~gh~~s-vd-ql~w~~~~~d~~atas~----- 85 (313)
T KOG1407|consen 21 QKVHSVAWNCDGTKLASGSFDK--TVSVWNLERD------RFRKELVYRGHTDS-VD-QLCWDPKHPDLFATASG----- 85 (313)
T ss_pred hcceEEEEcccCceeeecccCC--ceEEEEecch------hhhhhhcccCCCcc-hh-hheeCCCCCcceEEecC-----
Confidence 3456788999999988665432 2455555433 33333332211000 11 13376655555555421
Q ss_pred eEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEE
Q 011049 121 IYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILS 200 (494)
Q Consensus 121 ~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~ 200 (494)
+. .+.++|...++........++ +....|+|+|.++++.... ..|-.++
T Consensus 86 -------------dk--~ir~wd~r~~k~~~~i~~~~e------------ni~i~wsp~g~~~~~~~kd----D~it~id 134 (313)
T KOG1407|consen 86 -------------DK--TIRIWDIRSGKCTARIETKGE------------NINITWSPDGEYIAVGNKD----DRITFID 134 (313)
T ss_pred -------------Cc--eEEEEEeccCcEEEEeeccCc------------ceEEEEcCCCCEEEEecCc----ccEEEEE
Confidence 11 277888888776665554433 1234899999988764321 3455555
Q ss_pred cCC
Q 011049 201 WPL 203 (494)
Q Consensus 201 ~~~ 203 (494)
..+
T Consensus 135 ~r~ 137 (313)
T KOG1407|consen 135 ART 137 (313)
T ss_pred ecc
Confidence 443
No 369
>PRK02888 nitrous-oxide reductase; Validated
Probab=76.79 E-value=57 Score=33.69 Aligned_cols=52 Identities=4% Similarity=-0.109 Sum_probs=31.7
Q ss_pred ceeeeccCCCCCC-----CCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCC
Q 011049 18 DIIYTQPAEPAEG-----EKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 75 (494)
Q Consensus 18 ~~i~~~~~~~~~~-----~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~ 75 (494)
+.|-++|. .. .+.........+-.+...||||++|+..... .+.+=++|+..
T Consensus 296 n~V~VID~---~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVankl---S~tVSVIDv~k 352 (635)
T PRK02888 296 SKVPVVDG---RKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKL---SPTVTVIDVRK 352 (635)
T ss_pred CEEEEEEC---CccccCCcceEEEEECCCCccceEECCCCCEEEEeCCC---CCcEEEEEChh
Confidence 45667776 32 2233333334455678999999997765432 35677787764
No 370
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=76.62 E-value=38 Score=31.31 Aligned_cols=55 Identities=11% Similarity=0.072 Sum_probs=35.9
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCC--ceeeCCCCCEEEEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP--MMTRTSTGTNVIAKI 113 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~--~~~~spDG~~i~~~~ 113 (494)
.-+||+-|..++.-. .++++.+.|..+-. -.+.++.. -.| .+|||+||++++-.+
T Consensus 28 ~~~Fs~~G~~lAvGc----~nG~vvI~D~~T~~-iar~lsaH---------~~pi~sl~WS~dgr~LltsS 84 (405)
T KOG1273|consen 28 CCQFSRWGDYLAVGC----ANGRVVIYDFDTFR-IARMLSAH---------VRPITSLCWSRDGRKLLTSS 84 (405)
T ss_pred eEEeccCcceeeeec----cCCcEEEEEccccc-hhhhhhcc---------ccceeEEEecCCCCEeeeec
Confidence 457999999888754 25577788877641 22333322 233 367999999887655
No 371
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.48 E-value=23 Score=32.32 Aligned_cols=76 Identities=9% Similarity=0.038 Sum_probs=40.2
Q ss_pred CCCeecccccc--ccccceecCCCceEEEEee-eeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCC
Q 011049 31 EKPEILHKLDL--RFRSVSWCDDSLALVNETW-YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGT 107 (494)
Q Consensus 31 ~~~~~lt~~~~--~~~~p~wspDg~~i~f~~~-~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~ 107 (494)
.+++.+++.+. .+..-+|||||++|+-+.+ .+....-|=++|.+-+ -.++-+.+.-. .+|-. +.|.+||+
T Consensus 102 ~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~---fqrvgE~~t~G--iGpHe--v~lm~DGr 174 (366)
T COG3490 102 QEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREG---FQRVGEFSTHG--IGPHE--VTLMADGR 174 (366)
T ss_pred cCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccc---cceecccccCC--cCcce--eEEecCCc
Confidence 34555555443 4456689999998665443 1211234445555422 23333333221 22322 33999999
Q ss_pred EEEEEE
Q 011049 108 NVIAKI 113 (494)
Q Consensus 108 ~i~~~~ 113 (494)
.++...
T Consensus 175 tlvvan 180 (366)
T COG3490 175 TLVVAN 180 (366)
T ss_pred EEEEeC
Confidence 888754
No 372
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=75.91 E-value=27 Score=33.30 Aligned_cols=60 Identities=15% Similarity=0.104 Sum_probs=36.5
Q ss_pred ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
.....+||||+..+++.+- .+.+++.|+..| ....+.++.... . .. ++|.|-+++|+-.+
T Consensus 125 diydL~Ws~d~~~l~s~s~----dns~~l~Dv~~G--~l~~~~~dh~~y--v--qg--vawDpl~qyv~s~s 184 (434)
T KOG1009|consen 125 DIYDLAWSPDSNFLVSGSV----DNSVRLWDVHAG--QLLAILDDHEHY--V--QG--VAWDPLNQYVASKS 184 (434)
T ss_pred chhhhhccCCCceeeeeec----cceEEEEEeccc--eeEeeccccccc--c--ce--eecchhhhhhhhhc
Confidence 4457789999999888763 344666677766 334443333222 1 22 23888777776654
No 373
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=74.63 E-value=40 Score=30.82 Aligned_cols=124 Identities=10% Similarity=0.089 Sum_probs=68.4
Q ss_pred cceeeeccCCCCCCCCCeeccc-cccccccceecC-CCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~-~~~~~~~p~wsp-Dg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
....-++|+ +.|+..+... ..+.......+| |+++++--+-. . ...||-+ ..+ ..++-+.....|.
T Consensus 165 D~TCalWDi---e~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD-~-~aklWD~--R~~--~c~qtF~ghesDI--- 232 (343)
T KOG0286|consen 165 DMTCALWDI---ETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCD-K-SAKLWDV--RSG--QCVQTFEGHESDI--- 232 (343)
T ss_pred CceEEEEEc---ccceEEEEecCCcccEEEEecCCCCCCeEEecccc-c-ceeeeec--cCc--ceeEeeccccccc---
Confidence 335667888 7676555443 345556888999 99975533211 1 3556655 433 5677666554441
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
+ .+++-|+|..++--+ ++. -...+|+.......+++.+.. ...-.+.
T Consensus 233 -N--sv~ffP~G~afatGS-------------------DD~--tcRlyDlRaD~~~a~ys~~~~---------~~gitSv 279 (343)
T KOG0286|consen 233 -N--SVRFFPSGDAFATGS-------------------DDA--TCRLYDLRADQELAVYSHDSI---------ICGITSV 279 (343)
T ss_pred -c--eEEEccCCCeeeecC-------------------CCc--eeEEEeecCCcEEeeeccCcc---------cCCceeE
Confidence 2 234789997555432 111 144567766555555554432 1112335
Q ss_pred cccccCcEEEE
Q 011049 175 DINLNQLKILT 185 (494)
Q Consensus 175 ~~s~d~~~~~~ 185 (494)
.||..|+.++.
T Consensus 280 ~FS~SGRlLfa 290 (343)
T KOG0286|consen 280 AFSKSGRLLFA 290 (343)
T ss_pred EEcccccEEEe
Confidence 77777764443
No 374
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=74.36 E-value=27 Score=32.20 Aligned_cols=89 Identities=7% Similarity=-0.002 Sum_probs=56.2
Q ss_pred ccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
.+|+|-++|+....-+.|..+...+....-.+-+-||..||-.+.. +.=|-+.+..+| +..+-..+-.+-
T Consensus 157 k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStk---GTLIRIFdt~~g--~~l~E~RRG~d~----- 226 (346)
T KOG2111|consen 157 KTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTK---GTLIRIFDTEDG--TLLQELRRGVDR----- 226 (346)
T ss_pred ccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccC---cEEEEEEEcCCC--cEeeeeecCCch-----
Confidence 3588999998433333455666677777778899999988866543 345666677766 433333322111
Q ss_pred CCC-ceeeCCCCCEEEEEEe
Q 011049 96 GSP-MMTRTSTGTNVIAKIK 114 (494)
Q Consensus 96 ~~~-~~~~spDG~~i~~~~~ 114 (494)
.+. -+.+|||+++++..+.
T Consensus 227 A~iy~iaFSp~~s~LavsSd 246 (346)
T KOG2111|consen 227 ADIYCIAFSPNSSWLAVSSD 246 (346)
T ss_pred heEEEEEeCCCccEEEEEcC
Confidence 111 2338999999999873
No 375
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=73.19 E-value=93 Score=30.12 Aligned_cols=96 Identities=9% Similarity=-0.032 Sum_probs=45.5
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEE-cCCCCC---CCceEeeeccccc-c--cCCCCCCceeeCCCCCEEEEEEec
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLV-CPGSKD---VAPRVLFDRVFEN-V--YSDPGSPMMTRTSTGTNVIAKIKK 115 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~-~~~~g~---~~~~~lt~~~~~~-~--~~~~~~~~~~~spDG~~i~~~~~~ 115 (494)
..+++|.+|| |++ +. ..+||++ +.++.. .+.+.|.+..... . ...+..+. |.|||+ |++....
T Consensus 74 p~Gi~~~~~G--lyV-~~----~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~--~gpDG~-LYv~~G~ 143 (367)
T TIGR02604 74 VTGLAVAVGG--VYV-AT----PPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLA--WGPDGW-LYFNHGN 143 (367)
T ss_pred ccceeEecCC--EEE-eC----CCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCce--ECCCCC-EEEeccc
Confidence 3577899998 443 32 3568877 454321 1334444432221 1 11123344 899996 6665431
Q ss_pred cCccceEEEEccCCC---CCCCCCCceEeeecCCCceEEE
Q 011049 116 ENDEQIYILLNGRGF---TPEGNIPFLDLFDINTGSKERI 152 (494)
Q Consensus 116 ~~~~~~~~~~~~~g~---~~~~~~~~l~~~d~~~g~~~~l 152 (494)
... .... ..+. ......-.++++++++++.+.+
T Consensus 144 ~~~--~~~~--~~~~~~~~~~~~~g~i~r~~pdg~~~e~~ 179 (367)
T TIGR02604 144 TLA--SKVT--RPGTSDESRQGLGGGLFRYNPDGGKLRVV 179 (367)
T ss_pred CCC--ceec--cCCCccCcccccCceEEEEecCCCeEEEE
Confidence 100 0000 0000 0011123589999998876544
No 376
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=72.12 E-value=77 Score=30.44 Aligned_cols=44 Identities=14% Similarity=0.090 Sum_probs=27.0
Q ss_pred cccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 41 LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 41 ~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
...-...|||||+.|++++.. ..+||-+. +| .-...++.++.+.
T Consensus 187 ~eV~DL~FS~dgk~lasig~d---~~~VW~~~--~g-~~~a~~t~~~k~~ 230 (398)
T KOG0771|consen 187 AEVKDLDFSPDGKFLASIGAD---SARVWSVN--TG-AALARKTPFSKDE 230 (398)
T ss_pred CccccceeCCCCcEEEEecCC---ceEEEEec--cC-chhhhcCCcccch
Confidence 344578899999999998632 45666664 33 1333455444444
No 377
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=71.84 E-value=8.4 Score=28.41 Aligned_cols=55 Identities=9% Similarity=-0.025 Sum_probs=36.2
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 75 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~ 75 (494)
...|+|+..|. .+++.+.|-.+-..-.+.+.|||++.++++-. ...+|.++-+.|
T Consensus 34 ~~~GRll~ydp---~t~~~~vl~~~L~fpNGVals~d~~~vlv~Et---~~~Ri~rywl~G 88 (89)
T PF03088_consen 34 RPTGRLLRYDP---STKETTVLLDGLYFPNGVALSPDESFVLVAET---GRYRILRYWLKG 88 (89)
T ss_dssp ---EEEEEEET---TTTEEEEEEEEESSEEEEEE-TTSSEEEEEEG---GGTEEEEEESSS
T ss_pred CCCcCEEEEEC---CCCeEEEehhCCCccCeEEEcCCCCEEEEEec---cCceEEEEEEeC
Confidence 45678999988 77777777776555568899999998888642 134566555543
No 378
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=71.58 E-value=1e+02 Score=29.91 Aligned_cols=60 Identities=13% Similarity=0.115 Sum_probs=33.8
Q ss_pred CCccceeeeccCCCCCCCCCe---------eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCC
Q 011049 14 VSPRDIIYTQPAEPAEGEKPE---------ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 75 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~---------~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~ 75 (494)
-+..+.+|++|... ....+. +|+.......+..|++.-+--+.++..+. .-.+|-+...+
T Consensus 143 ~t~~~dv~Vfd~tk-~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~-~i~lwdi~~~~ 211 (422)
T KOG0264|consen 143 KTSSGDVYVFDYTK-HPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH-TICLWDINAES 211 (422)
T ss_pred cCCCCCEEEEEecc-CCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC-cEEEEeccccc
Confidence 36677889988832 222222 45544444456899997654444443333 45666665543
No 379
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=71.28 E-value=38 Score=30.70 Aligned_cols=35 Identities=17% Similarity=0.179 Sum_probs=25.9
Q ss_pred CCcEEEEecChHHHHHHHHHHhCCC-ceeEEEeCCC
Q 011049 343 PSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSG 377 (494)
Q Consensus 343 ~~ri~i~G~S~GG~~a~~~~~~~p~-~~~a~v~~~~ 377 (494)
++-+-++|.|.||.++-.++..-++ .++-.|+.++
T Consensus 91 sqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~g 126 (296)
T KOG2541|consen 91 SQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGG 126 (296)
T ss_pred cCceEEEEEccccHHHHHHHHhCCCCCcceeEeccC
Confidence 3568999999999999888877653 4555665544
No 380
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=71.28 E-value=17 Score=35.30 Aligned_cols=85 Identities=7% Similarity=-0.002 Sum_probs=45.0
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD 94 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~ 94 (494)
+..+.|+|+++- .+++-.+..-.........+||+||+.++-.+ ++. -|-+-|+++| ++++......
T Consensus 234 gmD~~vklW~vy-~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~s-fD~---~lKlwDtETG----~~~~~f~~~~---- 300 (503)
T KOG0282|consen 234 GMDGLVKLWNVY-DDRRCLRTFKGHRKPVRDASFNNCGTSFLSAS-FDR---FLKLWDTETG----QVLSRFHLDK---- 300 (503)
T ss_pred CCCceEEEEEEe-cCcceehhhhcchhhhhhhhccccCCeeeeee-cce---eeeeeccccc----eEEEEEecCC----
Confidence 455678888872 12233333333334445678999999876543 332 2444466666 3333332221
Q ss_pred CCCCceeeCCCCCEEEEEE
Q 011049 95 PGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~ 113 (494)
.-..+.+-||+.++.+..
T Consensus 301 -~~~cvkf~pd~~n~fl~G 318 (503)
T KOG0282|consen 301 -VPTCVKFHPDNQNIFLVG 318 (503)
T ss_pred -CceeeecCCCCCcEEEEe
Confidence 111233688886665553
No 381
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.09 E-value=82 Score=29.06 Aligned_cols=33 Identities=12% Similarity=0.065 Sum_probs=23.9
Q ss_pred cccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 41 LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 41 ~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
...++.+|+||.++|+-+.+ ...+|.-++.+|.
T Consensus 86 ~nvS~LTynp~~rtLFav~n---~p~~iVElt~~Gd 118 (316)
T COG3204 86 ANVSSLTYNPDTRTLFAVTN---KPAAIVELTKEGD 118 (316)
T ss_pred ccccceeeCCCcceEEEecC---CCceEEEEecCCc
Confidence 34788999999999776543 2567777777764
No 382
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=70.90 E-value=27 Score=34.29 Aligned_cols=85 Identities=16% Similarity=0.125 Sum_probs=50.6
Q ss_pred CCccceeeeccCCCCCCCCCee--ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEI--LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~--lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
.++.|.+-|||+ .|..|.- +-...+...+..|||-...|+.+--+ ...|+++|..... ...+|+.+.
T Consensus 183 asd~G~VtlwDv---~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~---Dkki~~yD~~s~~-s~~~l~y~~---- 251 (673)
T KOG4378|consen 183 ASDKGAVTLWDV---QGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGY---DKKINIYDIRSQA-STDRLTYSH---- 251 (673)
T ss_pred eccCCeEEEEec---cCCCcccchhhhccCCcCcceecCCccceEEEecc---cceEEEeeccccc-ccceeeecC----
Confidence 567788999998 6555532 22233445567899977665544323 4579999887542 334444321
Q ss_pred cCCCCCCceeeCCCCCEEEEEE
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~ 113 (494)
|-. .+.++++|..++...
T Consensus 252 ---Pls-tvaf~~~G~~L~aG~ 269 (673)
T KOG4378|consen 252 ---PLS-TVAFSECGTYLCAGN 269 (673)
T ss_pred ---Ccc-eeeecCCceEEEeec
Confidence 111 122899999887654
No 383
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=70.64 E-value=24 Score=32.37 Aligned_cols=83 Identities=14% Similarity=0.341 Sum_probs=48.0
Q ss_pred ccccceecCCC-ceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCc--eeeCCCCCEEEEEEeccCc
Q 011049 42 RFRSVSWCDDS-LALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPM--MTRTSTGTNVIAKIKKEND 118 (494)
Q Consensus 42 ~~~~p~wspDg-~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~--~~~spDG~~i~~~~~~~~~ 118 (494)
..+..+|||.. ..++-.+|.+ .-++|-+.-.|. ..++...+. ..|+ ++||.||++++...
T Consensus 29 sIS~l~FSP~~~~~~~A~SWD~--tVR~wevq~~g~-~~~ka~~~~---------~~PvL~v~WsddgskVf~g~----- 91 (347)
T KOG0647|consen 29 SISALAFSPQADNLLAAGSWDG--TVRIWEVQNSGQ-LVPKAQQSH---------DGPVLDVCWSDDGSKVFSGG----- 91 (347)
T ss_pred chheeEeccccCceEEecccCC--ceEEEEEecCCc-ccchhhhcc---------CCCeEEEEEccCCceEEeec-----
Confidence 45678899943 3443445544 367887766532 233433332 2343 56999997654432
Q ss_pred cceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCc
Q 011049 119 EQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNR 157 (494)
Q Consensus 119 ~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~ 157 (494)
.|+ ++..+|+.++....+-..++
T Consensus 92 --------~Dk--------~~k~wDL~S~Q~~~v~~Hd~ 114 (347)
T KOG0647|consen 92 --------CDK--------QAKLWDLASGQVSQVAAHDA 114 (347)
T ss_pred --------cCC--------ceEEEEccCCCeeeeeeccc
Confidence 111 36778888887766655443
No 384
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=70.30 E-value=18 Score=36.34 Aligned_cols=88 Identities=10% Similarity=0.031 Sum_probs=54.1
Q ss_pred CcEEEEecCCCcCCcccCCcccCCCCccCCCCchhHHHHH-hCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 011049 255 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 333 (494)
Q Consensus 255 ~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~ 333 (494)
.-+|+++|||||-+ .+...+.. +...|+ +.|.-|+.++|.- . ....+....+++.-+.-
T Consensus 396 ~sli~HcHGGGfVA--------qsSkSHE~----YLr~Wa~aL~cPiiSVdYSL----A----PEaPFPRaleEv~fAYc 455 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVA--------QSSKSHEP----YLRSWAQALGCPIISVDYSL----A----PEAPFPRALEEVFFAYC 455 (880)
T ss_pred ceEEEEecCCceee--------eccccccH----HHHHHHHHhCCCeEEeeecc----C----CCCCCCcHHHHHHHHHH
Confidence 46899999998643 22233332 222343 4788888866621 1 11111233556667778
Q ss_pred HHHHc----CCCCCCcEEEEecChHHHHHHHHHH
Q 011049 334 EVVRR----GVADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 334 ~l~~~----~~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
|++++ |. -.+||++.|.|+||.+.+.++.
T Consensus 456 W~inn~allG~-TgEriv~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 456 WAINNCALLGS-TGERIVLAGDSAGGNLCFTVAL 488 (880)
T ss_pred HHhcCHHHhCc-ccceEEEeccCCCcceeehhHH
Confidence 88775 33 4689999999999987665544
No 385
>PLN02847 triacylglycerol lipase
Probab=69.74 E-value=12 Score=38.12 Aligned_cols=21 Identities=33% Similarity=0.300 Sum_probs=17.9
Q ss_pred CcEEEEecChHHHHHHHHHHh
Q 011049 344 SRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~ 364 (494)
=+|.|+|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 489999999999999877654
No 386
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=69.60 E-value=1.4e+02 Score=30.70 Aligned_cols=72 Identities=18% Similarity=0.204 Sum_probs=44.9
Q ss_pred CC-CCCEEEEecCCCCCCCCCHHHHHHHHHHH-HhC-C--CcEEEEEcCCCCCccC--C---cccH----HHHHHHHHHH
Q 011049 413 KI-KKPILIIHGEVDDKVGLFPMQAERFFDAL-KGH-G--ALSRLVLLPFEHHVYA--A---RENV----MHVIWETDRW 478 (494)
Q Consensus 413 ~~-~~P~li~~G~~D~~v~~~~~~~~~~~~~l-~~~-g--~~~~~~~~~~~~H~~~--~---~~~~----~~~~~~~~~f 478 (494)
++ ..|++|+||..|-++| +.++-+-|-.| +.. | -...++.+.++.|.-. . ...+ ..++.+.++.
T Consensus 552 ~L~GKPaIiVhGR~DaLlP--vnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~~~pG~~~r~VPlh~Y~~qALd~ 629 (690)
T PF10605_consen 552 NLHGKPAIIVHGRSDALLP--VNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFLDFPGFDTRFVPLHPYFFQALDL 629 (690)
T ss_pred CcCCCceEEEecccceecc--cCCCchHHHHHhhhhcccccceeEEEecCCeechhhccCCCCCcccccccHHHHHHHHH
Confidence 35 4899999999999998 66654444444 332 3 3678888889888521 1 1111 2345556666
Q ss_pred HHHhcCCC
Q 011049 479 LQKYCLSN 486 (494)
Q Consensus 479 l~~~l~~~ 486 (494)
+..||+..
T Consensus 630 M~a~L~~G 637 (690)
T PF10605_consen 630 MWAHLKSG 637 (690)
T ss_pred HHHHhhcC
Confidence 66666543
No 387
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=68.09 E-value=86 Score=27.69 Aligned_cols=140 Identities=14% Similarity=0.118 Sum_probs=67.3
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccce--ecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVS--WCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~--wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
+.|..+|. .+|+..--.........+. -.++++.++..+ . ...|+.+++.+| +.+..........
T Consensus 3 g~l~~~d~---~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~---~-~~~l~~~d~~tG----~~~W~~~~~~~~~-- 69 (238)
T PF13360_consen 3 GTLSALDP---RTGKELWSYDLGPGIGGPVATAVPDGGRVYVAS---G-DGNLYALDAKTG----KVLWRFDLPGPIS-- 69 (238)
T ss_dssp SEEEEEET---TTTEEEEEEECSSSCSSEEETEEEETTEEEEEE---T-TSEEEEEETTTS----EEEEEEECSSCGG--
T ss_pred CEEEEEEC---CCCCEEEEEECCCCCCCccceEEEeCCEEEEEc---C-CCEEEEEECCCC----CEEEEeecccccc--
Confidence 56777776 5454322111111133333 344666655542 2 678999999877 3333322211000
Q ss_pred CCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEee-CcchhhhheeeeccCCCcc
Q 011049 96 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES-NREKYFETAVALVFGQGEE 174 (494)
Q Consensus 96 ~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~-~~~~~~~~~~~~~s~~~~~ 174 (494)
..| ..++..+++... .. .|+.+|..+|+ .+|.. .... +.. .. ....
T Consensus 70 ~~~----~~~~~~v~v~~~------------------~~---~l~~~d~~tG~--~~W~~~~~~~--~~~-~~---~~~~ 116 (238)
T PF13360_consen 70 GAP----VVDGGRVYVGTS------------------DG---SLYALDAKTGK--VLWSIYLTSS--PPA-GV---RSSS 116 (238)
T ss_dssp SGE----EEETTEEEEEET------------------TS---EEEEEETTTSC--EEEEEEE-SS--CTC-ST---B--S
T ss_pred cee----eecccccccccc------------------ee---eeEecccCCcc--eeeeeccccc--ccc-cc---cccc
Confidence 111 124444544431 11 49999998887 46662 2110 000 00 0011
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCcee
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKKSS 207 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~ 207 (494)
....+++.+++... ...++.+++++++..
T Consensus 117 ~~~~~~~~~~~~~~----~g~l~~~d~~tG~~~ 145 (238)
T PF13360_consen 117 SPAVDGDRLYVGTS----SGKLVALDPKTGKLL 145 (238)
T ss_dssp EEEEETTEEEEEET----CSEEEEEETTTTEEE
T ss_pred CceEecCEEEEEec----cCcEEEEecCCCcEE
Confidence 22333555655443 467899998888763
No 388
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=67.96 E-value=19 Score=35.78 Aligned_cols=58 Identities=3% Similarity=-0.020 Sum_probs=38.5
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
..-|+|-|+.|++...-+- ++++-+.|+. ..++|......+ .-+.-|||||++++-..
T Consensus 316 ~~~fnp~g~ii~lAGFGNL-~G~mEvwDv~----n~K~i~~~~a~~------tt~~eW~PdGe~flTAT 373 (566)
T KOG2315|consen 316 TAFFNPHGNIILLAGFGNL-PGDMEVWDVP----NRKLIAKFKAAN------TTVFEWSPDGEYFLTAT 373 (566)
T ss_pred ceEECCCCCEEEEeecCCC-CCceEEEecc----chhhccccccCC------ceEEEEcCCCcEEEEEe
Confidence 4569999999998876443 4556566655 336666655443 33334999999887654
No 389
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=67.85 E-value=25 Score=31.30 Aligned_cols=24 Identities=25% Similarity=0.308 Sum_probs=19.7
Q ss_pred CCCcEEEEecChHHHHHHHHHHhC
Q 011049 342 DPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 342 d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
..+++.|+|+|.|+.++...+.+.
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHH
Confidence 457899999999999998776543
No 390
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=67.16 E-value=49 Score=29.96 Aligned_cols=39 Identities=10% Similarity=0.011 Sum_probs=25.5
Q ss_pred eccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 35 ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 35 ~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
.|.......++.+|.||.++|+.+.+. ...|+.++++|.
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~---~~~i~els~~G~ 54 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDE---PGEIYELSLDGK 54 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETT---TTEEEEEETT--
T ss_pred ECCCccCCccccEEcCCCCeEEEEECC---CCEEEEEcCCCC
Confidence 344444456899999999888877643 568999998753
No 391
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=67.16 E-value=46 Score=31.36 Aligned_cols=98 Identities=12% Similarity=0.175 Sum_probs=56.7
Q ss_pred CccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
...|.|.++.. ..+..+. +...-.......|-|-+..|++-+ ....+|...+..+ ..-++....
T Consensus 125 dmsG~v~v~~~---stg~~~~~~~~e~~dieWl~WHp~a~illAG~----~DGsvWmw~ip~~--~~~kv~~Gh------ 189 (399)
T KOG0296|consen 125 DMSGKVLVFKV---STGGEQWKLDQEVEDIEWLKWHPRAHILLAGS----TDGSVWMWQIPSQ--ALCKVMSGH------ 189 (399)
T ss_pred CCCccEEEEEc---ccCceEEEeecccCceEEEEecccccEEEeec----CCCcEEEEECCCc--ceeeEecCC------
Confidence 34567777776 4444433 332334456788999777666543 2456888877754 223343332
Q ss_pred CCCCCce--eeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceE
Q 011049 94 DPGSPMM--TRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE 150 (494)
Q Consensus 94 ~~~~~~~--~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~ 150 (494)
+.|.. .+.|||++|+-... ++ -|.++++.+|.+.
T Consensus 190 --~~~ct~G~f~pdGKr~~tgy~------------------dg---ti~~Wn~ktg~p~ 225 (399)
T KOG0296|consen 190 --NSPCTCGEFIPDGKRILTGYD------------------DG---TIIVWNPKTGQPL 225 (399)
T ss_pred --CCCcccccccCCCceEEEEec------------------Cc---eEEEEecCCCcee
Confidence 22211 16899999876642 11 2778888887543
No 392
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=66.96 E-value=1.1e+02 Score=30.37 Aligned_cols=81 Identities=7% Similarity=0.056 Sum_probs=42.5
Q ss_pred ceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeec
Q 011049 65 QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI 144 (494)
Q Consensus 65 ~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~ 144 (494)
.....+++.++. ....+... .. .--++.+||||.+++..+- +....||++|.
T Consensus 427 ~G~w~V~d~e~~--~lv~~~~d--~~-----~ls~v~ysp~G~~lAvgs~-------------------d~~iyiy~Vs~ 478 (626)
T KOG2106|consen 427 TGRWFVLDTETQ--DLVTIHTD--NE-----QLSVVRYSPDGAFLAVGSH-------------------DNHIYIYRVSA 478 (626)
T ss_pred cceEEEEecccc--eeEEEEec--CC-----ceEEEEEcCCCCEEEEecC-------------------CCeEEEEEECC
Confidence 346777777653 22222222 11 1124558999999998761 12223677777
Q ss_pred CCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEE
Q 011049 145 NTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKIL 184 (494)
Q Consensus 145 ~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~ 184 (494)
++.+..++=.-.+. .-.-.+||+|++.+.
T Consensus 479 ~g~~y~r~~k~~gs-----------~ithLDwS~Ds~~~~ 507 (626)
T KOG2106|consen 479 NGRKYSRVGKCSGS-----------PITHLDWSSDSQFLV 507 (626)
T ss_pred CCcEEEEeeeecCc-----------eeEEeeecCCCceEE
Confidence 76555443222221 111237888886543
No 393
>PF15525 DUF4652: Domain of unknown function (DUF4652)
Probab=66.27 E-value=27 Score=29.65 Aligned_cols=71 Identities=15% Similarity=0.052 Sum_probs=48.1
Q ss_pred CCCCCccceeeeccCCCCCCCCCeecccccc-ccccc---eecCCCceEEEEee-eec--cceEEEEEcCCCCCCCceEe
Q 011049 11 NVEVSPRDIIYTQPAEPAEGEKPEILHKLDL-RFRSV---SWCDDSLALVNETW-YKT--SQTRTWLVCPGSKDVAPRVL 83 (494)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~~~~~lt~~~~-~~~~p---~wspDg~~i~f~~~-~~~--~~~~~~~~~~~~g~~~~~~l 83 (494)
...-+.-|.||+.++ .++.-.+|-.++. ....| -|--|-..++.+.. +++ .+++||++++.++ +...|
T Consensus 81 ~a~eEgiGkIYIkn~---~~~~~~~L~i~~~~~k~sPK~i~WiDD~~L~vIIG~a~GTvS~GGnLy~~nl~tg--~~~~l 155 (200)
T PF15525_consen 81 EAEEEGIGKIYIKNL---NNNNWWSLQIDQNEEKYSPKYIEWIDDNNLAVIIGYAHGTVSKGGNLYKYNLNTG--NLTEL 155 (200)
T ss_pred ccccccceeEEEEec---CCCceEEEEecCcccccCCceeEEecCCcEEEEEccccceEccCCeEEEEEccCC--ceeEe
Confidence 444555679999998 6677666644433 23344 48888776666554 222 4689999999988 87888
Q ss_pred eec
Q 011049 84 FDR 86 (494)
Q Consensus 84 t~~ 86 (494)
+..
T Consensus 156 y~~ 158 (200)
T PF15525_consen 156 YEW 158 (200)
T ss_pred eec
Confidence 864
No 394
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=65.59 E-value=23 Score=33.52 Aligned_cols=61 Identities=15% Similarity=0.152 Sum_probs=45.0
Q ss_pred CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC--------------------Cc-EEEEEcCCCCCccCCcccHHHHHHH
Q 011049 416 KPILIIHGEVDDKVGLFPMQAERFFDALKGHG--------------------AL-SRLVLLPFEHHVYAARENVMHVIWE 474 (494)
Q Consensus 416 ~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g--------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~~ 474 (494)
.++||..|..|..|+ ....+.+.++|.=.+ .+ ..+.++.++||... ..+...+..
T Consensus 234 i~VliY~Gd~D~icn--~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~--~qP~~al~m 309 (319)
T PLN02213 234 YRSLIYSGDHDIAVP--FLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE--YRPNETFIM 309 (319)
T ss_pred ceEEEEECCcCeeCC--cHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC--cCHHHHHHH
Confidence 699999999999987 888889999886211 12 66777779999773 356666666
Q ss_pred HHHHHH
Q 011049 475 TDRWLQ 480 (494)
Q Consensus 475 ~~~fl~ 480 (494)
+..|+.
T Consensus 310 ~~~fi~ 315 (319)
T PLN02213 310 FQRWIS 315 (319)
T ss_pred HHHHHc
Confidence 666664
No 395
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=65.47 E-value=25 Score=35.04 Aligned_cols=64 Identities=9% Similarity=0.028 Sum_probs=39.9
Q ss_pred ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEe
Q 011049 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~ 114 (494)
......|||-|+.++..+-.+. +.+++-+|++-. +.++. ... +.+. ....- |.|.|++++-.++
T Consensus 494 ~~N~vfwsPkG~fvvva~l~s~-~g~l~F~D~~~a--~~k~~-~~~--eh~~-at~ve--WDPtGRYvvT~ss 557 (698)
T KOG2314|consen 494 FANTVFWSPKGRFVVVAALVSR-RGDLEFYDTDYA--DLKDT-ASP--EHFA-ATEVE--WDPTGRYVVTSSS 557 (698)
T ss_pred ccceEEEcCCCcEEEEEEeccc-ccceEEEecchh--hhhhc-cCc--cccc-cccce--ECCCCCEEEEeee
Confidence 3446789999999988776553 778999988743 22222 111 1110 01122 9999998877664
No 396
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=64.12 E-value=1.5e+02 Score=28.91 Aligned_cols=39 Identities=21% Similarity=0.142 Sum_probs=28.8
Q ss_pred HHHHHHHHHc-CCCCCCcEEEEecChHHHHHHHHHHhCCC
Q 011049 329 EAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHAPH 367 (494)
Q Consensus 329 ~~~v~~l~~~-~~~d~~ri~i~G~S~GG~~a~~~~~~~p~ 367 (494)
...+++.... -..||+|+++.+.+.++.-+++.....|.
T Consensus 131 A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpg 170 (471)
T KOG0256|consen 131 AEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPG 170 (471)
T ss_pred HHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCC
Confidence 3444544432 23699999999999999999888887764
No 397
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=63.29 E-value=33 Score=35.46 Aligned_cols=78 Identities=15% Similarity=0.270 Sum_probs=44.9
Q ss_pred ceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEE
Q 011049 46 VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILL 125 (494)
Q Consensus 46 p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~ 125 (494)
.+||++|+.|+-.. ++.|-.+++.++ +.. ++..+..+. ....... .+||+..++.....
T Consensus 25 ~~~s~nG~~L~t~~-----~d~Vi~idv~t~--~~~-l~s~~~ed~-d~ita~~--l~~d~~~L~~a~rs---------- 83 (775)
T KOG0319|consen 25 VAWSSNGQHLYTAC-----GDRVIIIDVATG--SIA-LPSGSNEDE-DEITALA--LTPDEEVLVTASRS---------- 83 (775)
T ss_pred eeECCCCCEEEEec-----CceEEEEEccCC--cee-cccCCccch-hhhheee--ecCCccEEEEeecc----------
Confidence 67999999766432 467888888877 322 333222211 0112223 69998766655421
Q ss_pred ccCCCCCCCCCCceEeeecCCCceEEEEee
Q 011049 126 NGRGFTPEGNIPFLDLFDINTGSKERIWES 155 (494)
Q Consensus 126 ~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 155 (494)
. .|.++++.+|+..+.|..
T Consensus 84 ---------~--llrv~~L~tgk~irswKa 102 (775)
T KOG0319|consen 84 ---------Q--LLRVWSLPTGKLIRSWKA 102 (775)
T ss_pred ---------c--eEEEEEcccchHhHhHhh
Confidence 1 266677777766666654
No 398
>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=62.21 E-value=6.2 Score=30.14 Aligned_cols=14 Identities=14% Similarity=-0.099 Sum_probs=12.2
Q ss_pred eecCCCceEEEEee
Q 011049 47 SWCDDSLALVNETW 60 (494)
Q Consensus 47 ~wspDg~~i~f~~~ 60 (494)
.|||||++|-|+.+
T Consensus 74 vfSpDG~~lSFTYN 87 (122)
T PF12566_consen 74 VFSPDGSWLSFTYN 87 (122)
T ss_pred EECCCCCEEEEEec
Confidence 69999999999763
No 399
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=62.18 E-value=19 Score=34.35 Aligned_cols=82 Identities=6% Similarity=0.043 Sum_probs=44.7
Q ss_pred ceeeeccCCCCCCCCCeecccccccc-----ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRF-----RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~-----~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
+.|=++|+ .+.+.+.....+++. ....|||||.+++--+ .+..||+-++.++ ....+...+..+
T Consensus 363 dtl~viDl---Rt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS----~dgsv~iW~v~tg--KlE~~l~~s~s~-- 431 (459)
T KOG0288|consen 363 DTLKVIDL---RTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGS----ADGSVYIWSVFTG--KLEKVLSLSTSN-- 431 (459)
T ss_pred Cceeeeec---ccccEEEEeeccccccccccceeEECCCCceeeecc----CCCcEEEEEccCc--eEEEEeccCCCC--
Confidence 34555555 445555444433322 3467999999876533 3567888888887 333333333221
Q ss_pred CCCCCCceeeCCCCCEEEEE
Q 011049 93 SDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~ 112 (494)
++-..+.|+|.|+.++-.
T Consensus 432 --~aI~s~~W~~sG~~Llsa 449 (459)
T KOG0288|consen 432 --AAITSLSWNPSGSGLLSA 449 (459)
T ss_pred --cceEEEEEcCCCchhhcc
Confidence 011223488888766543
No 400
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=62.05 E-value=1.2e+02 Score=27.39 Aligned_cols=63 Identities=11% Similarity=-0.092 Sum_probs=47.5
Q ss_pred CCCCCCCCCccceeeeccCCCCCCC-CCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 7 RGDANVEVSPRDIIYTQPAEPAEGE-KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
.|++.+.=+|.+-||.++. .+| +.-..+..+....++.--+||..|+-.+ ++...|.+|..+.
T Consensus 62 vgdfVV~GCy~g~lYfl~~---~tGs~~w~f~~~~~vk~~a~~d~~~glIycgs----hd~~~yalD~~~~ 125 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCV---KTGSQIWNFVILETVKVRAQCDFDGGLIYCGS----HDGNFYALDPKTY 125 (354)
T ss_pred ECCEEEEEEccCcEEEEEe---cchhheeeeeehhhhccceEEcCCCceEEEec----CCCcEEEeccccc
Confidence 4666666789999999999 666 5556666666677889999998877654 3567888888754
No 401
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=61.06 E-value=20 Score=36.35 Aligned_cols=14 Identities=21% Similarity=0.221 Sum_probs=8.6
Q ss_pred HHHHHHHHHHcCCC
Q 011049 328 AEAAVEEVVRRGVA 341 (494)
Q Consensus 328 ~~~~v~~l~~~~~~ 341 (494)
..++++.|...|+.
T Consensus 404 A~~Al~~L~~~Gw~ 417 (690)
T PF10605_consen 404 AAEALAKLRAYGWE 417 (690)
T ss_pred HHHHHHHHHHhCCC
Confidence 34566677776653
No 402
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=60.86 E-value=32 Score=28.74 Aligned_cols=50 Identities=14% Similarity=0.065 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 325 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 325 ~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
.+++.+.++.+.+++ .+|+++|.|..|.+-+.++...++.+.+++-..|.
T Consensus 54 ~~~l~~~L~~~~~~g----k~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np~ 103 (160)
T PF08484_consen 54 KAELREFLEKLKAEG----KRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNPL 103 (160)
T ss_dssp HHHHHHHHHHHHHTT------EEEE---SHHHHHHHHHT--TTTS--EEES-GG
T ss_pred HHHHHHHHHHHHHcC----CEEEEECcchHHHHHHHHhCCCcceeEEEEeCChh
Confidence 334444444444544 78999999999999888888877888888887663
No 403
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=60.85 E-value=1.6e+02 Score=28.75 Aligned_cols=36 Identities=11% Similarity=-0.036 Sum_probs=21.1
Q ss_pred ccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCC
Q 011049 174 EDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFP 213 (494)
Q Consensus 174 ~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~ 213 (494)
.+|+..|..+.... ..-.+|.+...+..++.+..++
T Consensus 438 ~~fD~SGt~L~~~g----~~l~Vy~~~k~~k~W~~~~~~~ 473 (506)
T KOG0289|consen 438 LSFDQSGTYLGIAG----SDLQVYICKKKTKSWTEIKELA 473 (506)
T ss_pred EEEcCCCCeEEeec----ceeEEEEEecccccceeeehhh
Confidence 46666676665541 2235777766666676665544
No 404
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=60.66 E-value=17 Score=33.61 Aligned_cols=41 Identities=17% Similarity=0.147 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 323 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
.....+..+..+|.++. -..++|.++|+|-|+++|-.++..
T Consensus 72 g~~~~I~~ay~~l~~~~-~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNY-EPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred chHHHHHHHHHHHHhcc-CCcceEEEEecCccHHHHHHHHHH
Confidence 34556677788876664 455789999999999999887754
No 405
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=59.88 E-value=4.2 Score=21.29 Aligned_cols=8 Identities=13% Similarity=0.260 Sum_probs=6.6
Q ss_pred eecCCCce
Q 011049 47 SWCDDSLA 54 (494)
Q Consensus 47 ~wspDg~~ 54 (494)
.|||||+.
T Consensus 7 ~FSp~Grl 14 (23)
T PF10584_consen 7 TFSPDGRL 14 (23)
T ss_dssp SBBTTSSB
T ss_pred eECCCCeE
Confidence 69999973
No 406
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=59.88 E-value=70 Score=33.45 Aligned_cols=39 Identities=15% Similarity=0.038 Sum_probs=26.3
Q ss_pred ceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEe
Q 011049 18 DIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNET 59 (494)
Q Consensus 18 ~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~ 59 (494)
+.|=||.+ ...+..--+......+..+++|||+..+.-+
T Consensus 432 ~KvRiWsI---~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt 470 (712)
T KOG0283|consen 432 GKVRLWSI---SDKKVVDWNDLRDLITAVCYSPDGKGAVIGT 470 (712)
T ss_pred cceEEeec---CcCeeEeehhhhhhheeEEeccCCceEEEEE
Confidence 34445555 4455555666777778899999999866544
No 407
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=59.45 E-value=1.4e+02 Score=27.26 Aligned_cols=61 Identities=7% Similarity=-0.099 Sum_probs=30.6
Q ss_pred ceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEe
Q 011049 46 VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 46 p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~ 114 (494)
++-++||+.||.+. ..-|-+......-.+...-..-+ .|- .|.=..++||||+..+||..+
T Consensus 3 ~~~~~~Gk~lAi~q-----d~~iEiRsa~Ddf~si~~kcqVp-kD~--~PQWRkl~WSpD~tlLa~a~S 63 (282)
T PF15492_consen 3 LALSSDGKLLAILQ-----DQCIEIRSAKDDFSSIIGKCQVP-KDP--NPQWRKLAWSPDCTLLAYAES 63 (282)
T ss_pred eeecCCCcEEEEEe-----ccEEEEEeccCCchheeEEEecC-CCC--CchheEEEECCCCcEEEEEcC
Confidence 35678999999874 22333333332211111111111 110 112224569999999999763
No 408
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=59.21 E-value=3e+02 Score=30.89 Aligned_cols=76 Identities=12% Similarity=0.100 Sum_probs=43.8
Q ss_pred cceecCCCceEEEEeeeeccc-eEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQ-TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYI 123 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~-~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~ 123 (494)
+..|-=||+.++.+.-....+ ..+-+.+-+|. ...+.++... ....+.|-|.|..|+-..... .+++.+
T Consensus 200 ~IsWRgDg~~fAVs~~~~~~~~RkirV~drEg~----Lns~se~~~~-----l~~~LsWkPsgs~iA~iq~~~-sd~~Iv 269 (1265)
T KOG1920|consen 200 SISWRGDGEYFAVSFVESETGTRKIRVYDREGA----LNSTSEPVEG-----LQHSLSWKPSGSLIAAIQCKT-SDSDIV 269 (1265)
T ss_pred eEEEccCCcEEEEEEEeccCCceeEEEecccch----hhcccCcccc-----cccceeecCCCCeEeeeeecC-CCCcEE
Confidence 367999999888655322212 34555555522 2333333332 233445999999887665432 334677
Q ss_pred EEccCCC
Q 011049 124 LLNGRGF 130 (494)
Q Consensus 124 ~~~~~g~ 130 (494)
+|..+|.
T Consensus 270 ffErNGL 276 (1265)
T KOG1920|consen 270 FFERNGL 276 (1265)
T ss_pred EEecCCc
Confidence 8888884
No 409
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=59.08 E-value=15 Score=37.32 Aligned_cols=30 Identities=10% Similarity=0.144 Sum_probs=25.2
Q ss_pred ccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
.....+|-|||.+++..+ ++++++.|+..|
T Consensus 14 ci~d~afkPDGsqL~lAA-----g~rlliyD~ndG 43 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-----GSRLLVYDTSDG 43 (1081)
T ss_pred chheeEECCCCceEEEec-----CCEEEEEeCCCc
Confidence 456789999999999875 678999999876
No 410
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=58.56 E-value=29 Score=33.65 Aligned_cols=56 Identities=16% Similarity=0.067 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 321 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 321 ~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
..+...|..++++.++... +.+-.-.|.|=||+.++..=..+|+-+.+.|+.....
T Consensus 114 i~QAA~D~Hri~~A~K~iY---~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 114 IWQAASDQHRIVQAFKPIY---PGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred HhHhhHHHHHHHHHHHhhc---cCCceecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 5677899999999886643 5789999999999999988888999999999876554
No 411
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=58.16 E-value=18 Score=36.95 Aligned_cols=49 Identities=12% Similarity=0.088 Sum_probs=30.5
Q ss_pred eeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEE
Q 011049 19 IIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLV 71 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~ 71 (494)
.|+|+..... .+...|-.........+|||||+.|+-++. ++ --.+|-.
T Consensus 553 vI~lw~t~~W--~~~~~L~~HsLTVT~l~FSpdg~~LLsvsR-DR-t~sl~~~ 601 (764)
T KOG1063|consen 553 VIRLWNTANW--LQVQELEGHSLTVTRLAFSPDGRYLLSVSR-DR-TVSLYEV 601 (764)
T ss_pred EEEEEeccch--hhhheecccceEEEEEEECCCCcEEEEeec-Cc-eEEeeee
Confidence 6777776211 122346666677788999999999887653 22 2345544
No 412
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=58.04 E-value=42 Score=23.81 Aligned_cols=42 Identities=24% Similarity=0.316 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHcCCCC-CCcEEEEecChHHHHHHHHHHh
Q 011049 323 QLVSSAEAAVEEVVRRGVAD-PSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 323 ~~~~d~~~~v~~l~~~~~~d-~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
-....+..-++|+.+++.++ |+++-|+|.|-|=.+|..+++.
T Consensus 18 GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~a 60 (78)
T PF12242_consen 18 GCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAA 60 (78)
T ss_dssp HHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHH
Confidence 34566677788888865443 5899999999997777666654
No 413
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=57.40 E-value=1.3e+02 Score=27.86 Aligned_cols=58 Identities=7% Similarity=-0.186 Sum_probs=37.8
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
-++.-.||||.++... ..--.++-..+......|++||+.|+-.+. ...++.-|+.+|
T Consensus 65 gG~Dr~I~LWnv~gdc-eN~~~lkgHsgAVM~l~~~~d~s~i~S~gt----Dk~v~~wD~~tG 122 (338)
T KOG0265|consen 65 GGSDRAIVLWNVYGDC-ENFWVLKGHSGAVMELHGMRDGSHILSCGT----DKTVRGWDAETG 122 (338)
T ss_pred cCCcceEEEEeccccc-cceeeeccccceeEeeeeccCCCEEEEecC----CceEEEEecccc
Confidence 4455578888873211 223345555566678899999998776542 446788888877
No 414
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=57.03 E-value=25 Score=25.94 Aligned_cols=41 Identities=20% Similarity=0.243 Sum_probs=26.8
Q ss_pred ceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEe
Q 011049 65 QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 114 (494)
Q Consensus 65 ~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~ 114 (494)
..+++.+++.++ +.+.|-+.-. .|+... .|||++++++...
T Consensus 36 ~GRll~ydp~t~--~~~vl~~~L~-----fpNGVa--ls~d~~~vlv~Et 76 (89)
T PF03088_consen 36 TGRLLRYDPSTK--ETTVLLDGLY-----FPNGVA--LSPDESFVLVAET 76 (89)
T ss_dssp -EEEEEEETTTT--EEEEEEEEES-----SEEEEE--E-TTSSEEEEEEG
T ss_pred CcCEEEEECCCC--eEEEehhCCC-----ccCeEE--EcCCCCEEEEEec
Confidence 579999999987 6666654321 122223 7999999998763
No 415
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=56.93 E-value=1.5e+02 Score=26.69 Aligned_cols=84 Identities=12% Similarity=0.022 Sum_probs=47.0
Q ss_pred CccceeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 93 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~ 93 (494)
+|.-.|=++-+ .+|.-.+ +-..+........+||++.|+-.. ...|-++|+.++...+..-++....
T Consensus 17 ~YDhTIRfWqa---~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~-----~qhvRlyD~~S~np~Pv~t~e~h~k---- 84 (311)
T KOG0315|consen 17 GYDHTIRFWQA---LTGICSRTIQHPDSQVNRLEITPDKKDLAAAG-----NQHVRLYDLNSNNPNPVATFEGHTK---- 84 (311)
T ss_pred cCcceeeeeeh---hcCeEEEEEecCccceeeEEEcCCcchhhhcc-----CCeeEEEEccCCCCCceeEEeccCC----
Confidence 33444444444 4455443 444455556788999999988653 4566677777663233433333222
Q ss_pred CCCCCceeeCCCCCEEEEE
Q 011049 94 DPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 94 ~~~~~~~~~spDG~~i~~~ 112 (494)
+--.+.+--||++++-.
T Consensus 85 --NVtaVgF~~dgrWMyTg 101 (311)
T KOG0315|consen 85 --NVTAVGFQCDGRWMYTG 101 (311)
T ss_pred --ceEEEEEeecCeEEEec
Confidence 12234577788877543
No 416
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=56.60 E-value=86 Score=32.21 Aligned_cols=161 Identities=10% Similarity=0.004 Sum_probs=84.4
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEE
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 124 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~ 124 (494)
...|+-|+..+++.+.. ..++..+.++++ +-+.+-.......- .+-. .+..||||.+|+....
T Consensus 433 ~i~ftid~~k~~~~s~~---~~~le~~el~~p--s~kel~~~~~~~~~-~~I~-~l~~SsdG~yiaa~~t---------- 495 (691)
T KOG2048|consen 433 AISFTIDKNKLFLVSKN---IFSLEEFELETP--SFKELKSIQSQAKC-PSIS-RLVVSSDGNYIAAIST---------- 495 (691)
T ss_pred eeEEEecCceEEEEecc---cceeEEEEecCc--chhhhhccccccCC-Ccce-eEEEcCCCCEEEEEec----------
Confidence 45688888888777621 356777777765 33333222111000 0011 1227999999998762
Q ss_pred EccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccC-cEEEEEEecCCCCCeEEEEEcCC
Q 011049 125 LNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQ-LKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 125 ~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~-~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
.+ .++++++++++.+.+-..-.. .+ ....++|.. +.+++..++ .++|.++.+.
T Consensus 496 --------~g---~I~v~nl~~~~~~~l~~rln~-----~v------Ta~~~~~~~~~~lvvats~----nQv~efdi~~ 549 (691)
T KOG2048|consen 496 --------RG---QIFVYNLETLESHLLKVRLNI-----DV------TAAAFSPFVRNRLVVATSN----NQVFEFDIEA 549 (691)
T ss_pred --------cc---eEEEEEcccceeecchhccCc-----ce------eeeeccccccCcEEEEecC----CeEEEEecch
Confidence 22 399999998765544311111 00 112444332 445554432 5788888755
Q ss_pred CceeEeecCCCCCCcccccccEEEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCc
Q 011049 204 KKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDY 266 (494)
Q Consensus 204 ~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~ 266 (494)
.+..++...|.. .+ .-.+++..+ .+.+..+-|+ .|..+++|++.|
T Consensus 550 ~~l~~ws~~nt~-----nl---pk~~~~l~~-~~~gisfd~~---------n~s~~~~~~a~w 594 (691)
T KOG2048|consen 550 RNLTRWSKNNTR-----NL---PKEPKTLIP-GIPGISFDPK---------NSSRFIVYDAHW 594 (691)
T ss_pred hhhhhhhhcccc-----cc---ccChhhcCC-CCceEEeCCC---------CccEEEEEcCcE
Confidence 554444433321 11 112233332 4677777665 367888887653
No 417
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=56.12 E-value=12 Score=32.78 Aligned_cols=33 Identities=24% Similarity=0.297 Sum_probs=25.9
Q ss_pred CcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCC
Q 011049 344 SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 378 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 378 (494)
++|.+++||||=++|..++... .++.+++++|-
T Consensus 57 ~~i~lvAWSmGVw~A~~~l~~~--~~~~aiAINGT 89 (213)
T PF04301_consen 57 REIYLVAWSMGVWAANRVLQGI--PFKRAIAINGT 89 (213)
T ss_pred ceEEEEEEeHHHHHHHHHhccC--CcceeEEEECC
Confidence 7899999999999998887654 36666766653
No 418
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=55.58 E-value=32 Score=32.58 Aligned_cols=55 Identities=11% Similarity=0.021 Sum_probs=28.7
Q ss_pred HHHHHHHH-HHHHcCCCCCCcEEEEecChHHHHHHHHHHh----CC------CceeEEEeCCCCCC
Q 011049 326 SSAEAAVE-EVVRRGVADPSRIAVGGHSYGAFMTAHLLAH----AP------HLFCCGIARSGSYN 380 (494)
Q Consensus 326 ~d~~~~v~-~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~----~p------~~~~a~v~~~~~~~ 380 (494)
.|+..++. ++.+.+......+.|+|.||||..+-.++.. .. =-+++++...|+++
T Consensus 32 ~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~ 97 (319)
T PLN02213 32 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTY 97 (319)
T ss_pred HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCC
Confidence 45555543 3333333445567777777777655444431 10 13566666666554
No 419
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=54.99 E-value=61 Score=32.17 Aligned_cols=89 Identities=11% Similarity=0.021 Sum_probs=42.3
Q ss_pred CCccceeeeccCCCCCCCCCeecc----ccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccc
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILH----KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE 89 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt----~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~ 89 (494)
-+-.|.|.+|+. .--+-.|.-.. ...-..+..+||+||+.|+--+..+ .-.+|-+. . -.+.|....+-
T Consensus 335 gc~DGSIQ~W~~-~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~--tLKvWDLr--q---~kkpL~~~tgL 406 (641)
T KOG0772|consen 335 GCLDGSIQIWDK-GSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDD--TLKVWDLR--Q---FKKPLNVRTGL 406 (641)
T ss_pred cccCCceeeeec-CCcccccceEeeeccCCCCceeEEEeccccchhhhccCCC--ceeeeecc--c---cccchhhhcCC
Confidence 455667778876 10111222211 1112456789999999877433222 24555543 2 12233332221
Q ss_pred cccCCCCCCceeeCCCCCEEEEE
Q 011049 90 NVYSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 90 ~~~~~~~~~~~~~spDG~~i~~~ 112 (494)
..+ .| .--.|+|||.+-|+-.
T Consensus 407 ~t~-~~-~tdc~FSPd~kli~TG 427 (641)
T KOG0772|consen 407 PTP-FP-GTDCCFSPDDKLILTG 427 (641)
T ss_pred Ccc-CC-CCccccCCCceEEEec
Confidence 100 01 1123489999755443
No 420
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=54.94 E-value=20 Score=32.54 Aligned_cols=22 Identities=32% Similarity=0.394 Sum_probs=19.5
Q ss_pred CcEEEEecChHHHHHHHHHHhC
Q 011049 344 SRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
.+|-+.|||.||.+|..+..+.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 276 ARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred ceEEEeccccchHHHHHhcccc
Confidence 6899999999999998877666
No 421
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=54.94 E-value=20 Score=32.54 Aligned_cols=22 Identities=32% Similarity=0.394 Sum_probs=19.5
Q ss_pred CcEEEEecChHHHHHHHHHHhC
Q 011049 344 SRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 344 ~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
.+|-+.|||.||.+|..+..+.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 276 ARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred ceEEEeccccchHHHHHhcccc
Confidence 6899999999999998877666
No 422
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=54.44 E-value=2.4e+02 Score=28.37 Aligned_cols=122 Identities=9% Similarity=0.067 Sum_probs=62.9
Q ss_pred ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEec
Q 011049 36 LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 115 (494)
Q Consensus 36 lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~ 115 (494)
+...........|++|+++++--. -.+.+.+-|.... .....+++..... -++.|+|=-+-|+-+..
T Consensus 297 ~~~H~qeVCgLkws~d~~~lASGg----nDN~~~Iwd~~~~-~p~~~~~~H~aAV-------KA~awcP~q~~lLAsGG- 363 (484)
T KOG0305|consen 297 LQGHRQEVCGLKWSPDGNQLASGG----NDNVVFIWDGLSP-EPKFTFTEHTAAV-------KALAWCPWQSGLLATGG- 363 (484)
T ss_pred hhcccceeeeeEECCCCCeeccCC----CccceEeccCCCc-cccEEEeccceee-------eEeeeCCCccCceEEcC-
Confidence 444455667889999999877432 2455666666433 1233444444332 12338885555554431
Q ss_pred cCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCe
Q 011049 116 ENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQ 195 (494)
Q Consensus 116 ~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~ 195 (494)
.+ .+. .|..+|..+|+....-....+ + .+..|++..+.++.+......--.
T Consensus 364 --------------Gs-~D~--~i~fwn~~~g~~i~~vdtgsQ------V------csL~Wsk~~kEi~sthG~s~n~i~ 414 (484)
T KOG0305|consen 364 --------------GS-ADR--CIKFWNTNTGARIDSVDTGSQ------V------CSLIWSKKYKELLSTHGYSENQIT 414 (484)
T ss_pred --------------CC-ccc--EEEEEEcCCCcEecccccCCc------e------eeEEEcCCCCEEEEecCCCCCcEE
Confidence 11 122 477777777754332211111 1 123778887777766543333223
Q ss_pred EEEE
Q 011049 196 YHIL 199 (494)
Q Consensus 196 l~~~ 199 (494)
||.+
T Consensus 415 lw~~ 418 (484)
T KOG0305|consen 415 LWKY 418 (484)
T ss_pred EEec
Confidence 4444
No 423
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=54.31 E-value=2.5e+02 Score=28.39 Aligned_cols=62 Identities=10% Similarity=0.110 Sum_probs=32.4
Q ss_pred ccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCc--eeeCCCCCEEEEEEe
Q 011049 38 KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPM--MTRTSTGTNVIAKIK 114 (494)
Q Consensus 38 ~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~--~~~spDG~~i~~~~~ 114 (494)
...+....-+|+|||..|+-. -.++ .-.+|-- .| -.|...... +.++ +.|.|+...|+|...
T Consensus 102 AH~~A~~~gRW~~dGtgLlt~-GEDG-~iKiWSr--sG---MLRStl~Q~--------~~~v~c~~W~p~S~~vl~c~g 165 (737)
T KOG1524|consen 102 AHAAAISSGRWSPDGAGLLTA-GEDG-VIKIWSR--SG---MLRSTVVQN--------EESIRCARWAPNSNSIVFCQG 165 (737)
T ss_pred hhhhhhhhcccCCCCceeeee-cCCc-eEEEEec--cc---hHHHHHhhc--------CceeEEEEECCCCCceEEecC
Confidence 333444556899999987643 2333 3344432 11 111111101 2232 239999999999763
No 424
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=53.50 E-value=47 Score=32.53 Aligned_cols=69 Identities=10% Similarity=0.053 Sum_probs=33.2
Q ss_pred ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecc-ccc-----------ccCCCCCCceeeCCCCCEE
Q 011049 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-FEN-----------VYSDPGSPMMTRTSTGTNV 109 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~-~~~-----------~~~~~~~~~~~~spDG~~i 109 (494)
-......|.|.+.|+++.+..+ ++..+|+... ..++++-.-. +.. .-..-+-.++..|.||+++
T Consensus 313 LitDI~iSlDDrfLYvs~W~~G---dvrqYDISDP-~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRl 388 (461)
T PF05694_consen 313 LITDILISLDDRFLYVSNWLHG---DVRQYDISDP-FNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRL 388 (461)
T ss_dssp ----EEE-TTS-EEEEEETTTT---EEEEEE-SST-TS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEE
T ss_pred ceEeEEEccCCCEEEEEcccCC---cEEEEecCCC-CCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEE
Confidence 3456679999999999887544 6777776653 3555543211 000 0000012367789999999
Q ss_pred EEEEe
Q 011049 110 IAKIK 114 (494)
Q Consensus 110 ~~~~~ 114 (494)
+++.+
T Consensus 389 YvTnS 393 (461)
T PF05694_consen 389 YVTNS 393 (461)
T ss_dssp EEE--
T ss_pred EEEee
Confidence 99875
No 425
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=53.36 E-value=32 Score=20.51 Aligned_cols=30 Identities=7% Similarity=-0.182 Sum_probs=23.4
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
.+++|.|+++.|+|+-.. ...|++.+++|.
T Consensus 12 ~~la~d~~~~~lYw~D~~---~~~I~~~~~~g~ 41 (43)
T smart00135 12 NGLAVDWIEGRLYWTDWG---LDVIEVANLDGT 41 (43)
T ss_pred CEEEEeecCCEEEEEeCC---CCEEEEEeCCCC
Confidence 458999999998887432 368999998875
No 426
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=51.92 E-value=65 Score=23.06 Aligned_cols=58 Identities=12% Similarity=0.196 Sum_probs=39.1
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccCCc-----ccHHHHHHHHHHHH
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYAAR-----ENVMHVIWETDRWL 479 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~-----~~~~~~~~~~~~fl 479 (494)
+.=++|+||-.+. ...-..+++.|.+.|. ....+.-.||+.+.. .+..++.+.+..|+
T Consensus 16 k~~v~i~HG~~eh-----~~ry~~~a~~L~~~G~--~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 16 KAVVVIVHGFGEH-----SGRYAHLAEFLAEQGY--AVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CEEEEEeCCcHHH-----HHHHHHHHHHHHhCCC--EEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 4558899999876 3445678899988885 456777778886532 33445556665554
No 427
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=51.77 E-value=32 Score=34.48 Aligned_cols=63 Identities=17% Similarity=0.155 Sum_probs=45.0
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHh-----------------CC---------C-----cEEEEEcCCCCCccC
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKG-----------------HG---------A-----LSRLVLLPFEHHVYA 463 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~-----------------~g---------~-----~~~~~~~~~~~H~~~ 463 (494)
..++||..|..|..|+ ....+++.+.|.= .+ . ...++.+.++||...
T Consensus 364 gikVLiYnGd~D~icn--~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp 441 (462)
T PTZ00472 364 GVRVMIYAGDMDFICN--WIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVP 441 (462)
T ss_pred CceEEEEECCcCeecC--cHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccCh
Confidence 4799999999999987 8878888887751 01 1 355667789999765
Q ss_pred CcccHHHHHHHHHHHHH
Q 011049 464 ARENVMHVIWETDRWLQ 480 (494)
Q Consensus 464 ~~~~~~~~~~~~~~fl~ 480 (494)
.+.+...++.+..|+.
T Consensus 442 -~d~P~~~~~~i~~fl~ 457 (462)
T PTZ00472 442 -MDQPAVALTMINRFLR 457 (462)
T ss_pred -hhHHHHHHHHHHHHHc
Confidence 3455566666666663
No 428
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=51.66 E-value=2.4e+02 Score=27.48 Aligned_cols=147 Identities=8% Similarity=-0.044 Sum_probs=74.5
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccc--ccccCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF--ENVYSD 94 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~--~~~~~~ 94 (494)
.+.++++|. .+++..............+++|||+.++... . ..+.+.+++..+. ...+ .... ......
T Consensus 139 ~~~vsvid~---~t~~~~~~~~vG~~P~~~a~~p~g~~vyv~~-~--~~~~v~vi~~~~~--~v~~--~~~~~~~~~~~~ 208 (381)
T COG3391 139 NNTVSVIDA---ATNKVTATIPVGNTPTGVAVDPDGNKVYVTN-S--DDNTVSVIDTSGN--SVVR--GSVGSLVGVGTG 208 (381)
T ss_pred CceEEEEeC---CCCeEEEEEecCCCcceEEECCCCCeEEEEe-c--CCCeEEEEeCCCc--ceec--cccccccccCCC
Confidence 345555555 4343333222211225678999999866543 2 2467888886654 2221 1111 111112
Q ss_pred CCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcc
Q 011049 95 PGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE 174 (494)
Q Consensus 95 ~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~ 174 (494)
|.. +.++|||.+++..... .. ...+.++|..++.....-...+. . . -...
T Consensus 209 P~~--i~v~~~g~~~yV~~~~---------------~~---~~~v~~id~~~~~v~~~~~~~~~--------~-~-~~~v 258 (381)
T COG3391 209 PAG--IAVDPDGNRVYVANDG---------------SG---SNNVLKIDTATGNVTATDLPVGS--------G-A-PRGV 258 (381)
T ss_pred Cce--EEECCCCCEEEEEecc---------------CC---CceEEEEeCCCceEEEecccccc--------C-C-CCce
Confidence 232 3389999977665421 00 12477888887754432111111 0 0 0112
Q ss_pred cccccCcEEEEEEecCCCCCeEEEEEcCCCce
Q 011049 175 DINLNQLKILTSKESKTEITQYHILSWPLKKS 206 (494)
Q Consensus 175 ~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~ 206 (494)
.++|+|..++..... ...++.++..+...
T Consensus 259 ~~~p~g~~~yv~~~~---~~~V~vid~~~~~v 287 (381)
T COG3391 259 AVDPAGKAAYVANSQ---GGTVSVIDGATDRV 287 (381)
T ss_pred eECCCCCEEEEEecC---CCeEEEEeCCCCce
Confidence 667888776654433 56688887665443
No 429
>PF09910 DUF2139: Uncharacterized protein conserved in archaea (DUF2139); InterPro: IPR016675 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=51.27 E-value=79 Score=29.19 Aligned_cols=70 Identities=11% Similarity=0.186 Sum_probs=48.2
Q ss_pred CceEeeecCCCceEEEEeeCcc---hhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCceeEeecCC
Q 011049 137 PFLDLFDINTGSKERIWESNRE---KYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFP 213 (494)
Q Consensus 137 ~~l~~~d~~~g~~~~l~~~~~~---~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~~lt~~~ 213 (494)
.|+-.+|.+.++++.||..... .|.... .+.-.+|-.+.+++.+...-..--+|.++..+++.++|...+
T Consensus 78 SHVH~yd~e~~~VrLLWkesih~~~~WaGEV-------SdIlYdP~~D~LLlAR~DGh~nLGvy~ldr~~g~~~~L~~~p 150 (339)
T PF09910_consen 78 SHVHEYDTENDSVRLLWKESIHDKTKWAGEV-------SDILYDPYEDRLLLARADGHANLGVYSLDRRTGKAEKLSSNP 150 (339)
T ss_pred ceEEEEEcCCCeEEEEEecccCCccccccch-------hheeeCCCcCEEEEEecCCcceeeeEEEcccCCceeeccCCC
Confidence 4788999999999999987543 111101 112334555788888876555557999999999998887654
No 430
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=51.08 E-value=2e+02 Score=26.30 Aligned_cols=59 Identities=5% Similarity=0.004 Sum_probs=33.5
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEE
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIA 111 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~ 111 (494)
.....|||+++.+-+. +..+|+++.++..+---..++..+..| ..+...||.....-|.
T Consensus 162 ns~~~snd~~~~~~Vg----ds~~Vf~y~id~~sey~~~~~~a~t~D-----~gF~~S~s~~~~~FAv 220 (344)
T KOG4532|consen 162 NSLHYSNDPSWGSSVG----DSRRVFRYAIDDESEYIENIYEAPTSD-----HGFYNSFSENDLQFAV 220 (344)
T ss_pred eeeEEcCCCceEEEec----CCCcceEEEeCCccceeeeeEecccCC-----CceeeeeccCcceEEE
Confidence 3567999999988763 356788877775421222334444444 4444446554443333
No 431
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=50.73 E-value=47 Score=33.01 Aligned_cols=56 Identities=14% Similarity=0.104 Sum_probs=36.5
Q ss_pred HHHHHHHHH-HHHHcCCCCCCcEEEEecChHHHHHHHHHHh----C------CCceeEEEeCCCCCC
Q 011049 325 VSSAEAAVE-EVVRRGVADPSRIAVGGHSYGAFMTAHLLAH----A------PHLFCCGIARSGSYN 380 (494)
Q Consensus 325 ~~d~~~~v~-~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~----~------p~~~~a~v~~~~~~~ 380 (494)
++|+..++. |+.+.+......+.|.|.||||..+..+|.. . +=-+++++...|+.+
T Consensus 145 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 145 VKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTY 211 (433)
T ss_pred HHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcC
Confidence 355655554 4444444455789999999999766555432 1 115688888888765
No 432
>PLN02209 serine carboxypeptidase
Probab=50.07 E-value=50 Score=32.82 Aligned_cols=150 Identities=9% Similarity=0.016 Sum_probs=72.8
Q ss_pred EEEEEcCCCceEEEEEEeCCCCCCCCCCCCcEEEEecCCCcCCcccCCcccCCCCccCCC--------CchhHHHHHhCC
Q 011049 226 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM--------TPTSSLIFLARR 297 (494)
Q Consensus 226 ~~~~~~~dg~~~~~~l~~P~~~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~G 297 (494)
.+.+....+..+..+++.... ++. ..|+|+|+-|||.++.-.....--+|-.+..- .......|....
T Consensus 43 y~~v~~~~~~~lf~~f~es~~-~~~---~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 118 (437)
T PLN02209 43 YIGIGEEENVQFFYYFIKSDK-NPQ---EDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTA 118 (437)
T ss_pred EEEecCCCCeEEEEEEEecCC-CCC---CCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcC
Confidence 344443445667777776543 222 27999999999754421110000111111100 000111222322
Q ss_pred eEEEeCCCCCCCCCCCCCC--CchhHHHHHHHHHHHHH-HHHHcCCCCCCcEEEEecChHHHHHHHHHHh----C-----
Q 011049 298 FAVLAGPSIPIIGEGDKLP--NDRFVEQLVSSAEAAVE-EVVRRGVADPSRIAVGGHSYGAFMTAHLLAH----A----- 365 (494)
Q Consensus 298 ~~v~~~~~~~~~g~g~~~~--~~~~~~~~~~d~~~~v~-~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~----~----- 365 (494)
.++..|..-..|+..... ....-+..++|+..++. |+.+.+......+.|+|.||||..+..++.. .
T Consensus 119 -nllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~ 197 (437)
T PLN02209 119 -NIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCN 197 (437)
T ss_pred -cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccC
Confidence 333334322334432211 11111233466666664 4444444445689999999999765555432 1
Q ss_pred -CCceeEEEeCCCCCC
Q 011049 366 -PHLFCCGIARSGSYN 380 (494)
Q Consensus 366 -p~~~~a~v~~~~~~~ 380 (494)
+=.+++++...|+++
T Consensus 198 ~~inl~Gi~igng~td 213 (437)
T PLN02209 198 PPINLQGYVLGNPITH 213 (437)
T ss_pred CceeeeeEEecCcccC
Confidence 114678888888766
No 433
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=49.11 E-value=72 Score=31.29 Aligned_cols=59 Identities=14% Similarity=-0.060 Sum_probs=40.0
Q ss_pred CCCCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 12 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
...++..-|-++|+ ++|+...-...+....-..|-||+.-++++.- ....|-..|+..+
T Consensus 274 LS~sfD~~lKlwDt---ETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~---sd~ki~~wDiRs~ 332 (503)
T KOG0282|consen 274 LSASFDRFLKLWDT---ETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGG---SDKKIRQWDIRSG 332 (503)
T ss_pred eeeecceeeeeecc---ccceEEEEEecCCCceeeecCCCCCcEEEEec---CCCcEEEEeccch
Confidence 34677778889999 88876654455455566789999976666542 3456666677665
No 434
>PLN00181 protein SPA1-RELATED; Provisional
Probab=48.59 E-value=3.9e+02 Score=29.09 Aligned_cols=30 Identities=3% Similarity=0.096 Sum_probs=17.1
Q ss_pred cccceecCC-CceEEEEeeeeccceEEEEEcCCCC
Q 011049 43 FRSVSWCDD-SLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 43 ~~~p~wspD-g~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
.....|+|. ++.|+ ++..+ ..|.+.++.++
T Consensus 535 v~~l~~~~~~~~~la-s~~~D---g~v~lWd~~~~ 565 (793)
T PLN00181 535 LSGICWNSYIKSQVA-SSNFE---GVVQVWDVARS 565 (793)
T ss_pred eeeEEeccCCCCEEE-EEeCC---CeEEEEECCCC
Confidence 446789885 45544 44333 35666666654
No 435
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=47.41 E-value=3.1e+02 Score=27.50 Aligned_cols=65 Identities=11% Similarity=-0.050 Sum_probs=41.5
Q ss_pred ccccccceecCCCceEEEEeeeec-----c--ceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEE
Q 011049 40 DLRFRSVSWCDDSLALVNETWYKT-----S--QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 40 ~~~~~~p~wspDg~~i~f~~~~~~-----~--~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~ 112 (494)
+.....+.|-+.|+.|++...+.. . .+.||++++... ..+...+..+.. --++|+|++++-+..
T Consensus 222 k~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~--~i~V~~~~~~pV-------hdf~W~p~S~~F~vi 292 (561)
T COG5354 222 KVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITER--SIPVEKDLKDPV-------HDFTWEPLSSRFAVI 292 (561)
T ss_pred eecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeeccc--ccceeccccccc-------eeeeecccCCceeEE
Confidence 345567889999999998775322 1 378999998855 333332212111 124599999887776
Q ss_pred E
Q 011049 113 I 113 (494)
Q Consensus 113 ~ 113 (494)
+
T Consensus 293 ~ 293 (561)
T COG5354 293 S 293 (561)
T ss_pred e
Confidence 5
No 436
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=46.87 E-value=3.3e+02 Score=27.70 Aligned_cols=37 Identities=27% Similarity=0.293 Sum_probs=26.7
Q ss_pred CCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 341 ADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 341 ~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
+|+++|.+...|.++...+..+...|. ..++...|.+
T Consensus 117 v~pe~Ivit~Ga~~al~~l~~~l~~pG--D~Vlv~~P~Y 153 (496)
T PLN02376 117 FDPERVVMSGGATGANETIMFCLADPG--DVFLIPSPYY 153 (496)
T ss_pred CChhhEEEccchHHHHHHHHHHhCCCC--CEEEECCCCc
Confidence 799999999999999877766665554 3455555543
No 437
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=46.76 E-value=1.4e+02 Score=29.34 Aligned_cols=56 Identities=5% Similarity=-0.196 Sum_probs=35.2
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
=+|.|.|=++|+ ...+ ....-.+.........+-|-|..|+-.. ++++-+-|+.+|
T Consensus 172 GsYDg~vrl~Dt-R~~~-~~v~elnhg~pVe~vl~lpsgs~iasAg-----Gn~vkVWDl~~G 227 (487)
T KOG0310|consen 172 GSYDGKVRLWDT-RSLT-SRVVELNHGCPVESVLALPSGSLIASAG-----GNSVKVWDLTTG 227 (487)
T ss_pred cCCCceEEEEEe-ccCC-ceeEEecCCCceeeEEEcCCCCEEEEcC-----CCeEEEEEecCC
Confidence 467777777877 1122 2222233445556677899998888642 577888888755
No 438
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=46.06 E-value=1.6e+02 Score=28.48 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=21.6
Q ss_pred ccccccccccceecCCCceEEEEeeeeccceEEEEEc
Q 011049 36 LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 72 (494)
Q Consensus 36 lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~ 72 (494)
|+.........+|+|+|..++-..+ ++ .--+|...
T Consensus 61 Ls~H~~aVN~vRf~p~gelLASg~D-~g-~v~lWk~~ 95 (434)
T KOG1009|consen 61 LSRHTRAVNVVRFSPDGELLASGGD-GG-EVFLWKQG 95 (434)
T ss_pred ccCCcceeEEEEEcCCcCeeeecCC-Cc-eEEEEEec
Confidence 5555555566789999998775432 22 34455554
No 439
>PRK13613 lipoprotein LpqB; Provisional
Probab=45.48 E-value=3.8e+02 Score=28.03 Aligned_cols=62 Identities=19% Similarity=0.243 Sum_probs=33.9
Q ss_pred ccccceecCCCceEEEEeeeeccceE-EEEEcCCCCCCCceEeeecccccccCCCCCC--ceeeCCCCCEEEEEEe
Q 011049 42 RFRSVSWCDDSLALVNETWYKTSQTR-TWLVCPGSKDVAPRVLFDRVFENVYSDPGSP--MMTRTSTGTNVIAKIK 114 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~~~~~~~-~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~--~~~~spDG~~i~~~~~ 114 (494)
....|+|.++| ++.- .+.+....+ ++++.- +| +...+.. +... +.+ .+..|+||.++++...
T Consensus 410 ~Lt~PS~d~~g-~vWt-vd~~~~~~~vl~v~~~-~G--~~~~V~~-~~l~-----g~~I~~lrvSrDG~RvAvv~~ 474 (599)
T PRK13613 410 RLTSPSWDGRG-DLWV-VDRDPADPRLLWLLQG-DG--EPVEVRT-PELD-----GHRVVAVRVARDGVRVALIVE 474 (599)
T ss_pred cccCCcCcCCC-CEEE-ecCCCCCceEEEEEcC-CC--cEEEeec-cccC-----CCEeEEEEECCCccEEEEEEe
Confidence 46899999998 5543 333221233 555543 33 3333322 1111 212 2447999999999874
No 440
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=44.05 E-value=3.6e+02 Score=29.22 Aligned_cols=54 Identities=17% Similarity=0.032 Sum_probs=29.1
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCce------EEEEeeeeccceEEEEEcCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLA------LVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~------i~f~~~~~~~~~~~~~~~~~~g 76 (494)
...||-+|+ +.|+...-=.......--.+.|+.|. =.|+. -..+.|+++|+.-.
T Consensus 503 ~~~ly~mDL---e~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflG---ls~n~lfriDpR~~ 562 (794)
T PF08553_consen 503 PNKLYKMDL---ERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLG---LSDNSLFRIDPRLS 562 (794)
T ss_pred CCceEEEec---CCCcEEEEeecCCCcceeEecccccccccCCCceEEE---ECCCceEEeccCCC
Confidence 457999999 77776553333222112245565431 01111 13568999998754
No 441
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=44.01 E-value=1.8e+02 Score=27.35 Aligned_cols=107 Identities=9% Similarity=-0.097 Sum_probs=0.0
Q ss_pred eccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCcee
Q 011049 22 TQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMT 101 (494)
Q Consensus 22 ~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~ 101 (494)
++|+ +.++. +..+-..-.+|+|= ||+ ++.++-.+ .+++.++.++| ..+.+..-++-- ....
T Consensus 189 vidv---~s~ev--l~~GLsmPhSPRWh-dgr--Lwvldsgt--Gev~~vD~~~G--~~e~Va~vpG~~-----rGL~-- 249 (335)
T TIGR03032 189 VIDI---PSGEV--VASGLSMPHSPRWY-QGK--LWLLNSGR--GELGYVDPQAG--KFQPVAFLPGFT-----RGLA-- 249 (335)
T ss_pred EEEe---CCCCE--EEcCccCCcCCcEe-CCe--EEEEECCC--CEEEEEcCCCC--cEEEEEECCCCC-----cccc--
Q ss_pred eCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceE
Q 011049 102 RTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE 150 (494)
Q Consensus 102 ~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~ 150 (494)
|- |+.+++..+...+++..-=+..+..-..... .++++|+++|+..
T Consensus 250 f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~C-Gv~vidl~tG~vv 295 (335)
T TIGR03032 250 FA--GDFAFVGLSKLRESRVFGGLPIEERLDALGC-GVAVIDLNSGDVV 295 (335)
T ss_pred ee--CCEEEEEeccccCCCCcCCCchhhhhhhhcc-cEEEEECCCCCEE
No 442
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=43.53 E-value=1.1e+02 Score=31.38 Aligned_cols=12 Identities=17% Similarity=0.371 Sum_probs=9.5
Q ss_pred eCCCCCEEEEEE
Q 011049 102 RTSTGTNVIAKI 113 (494)
Q Consensus 102 ~spDG~~i~~~~ 113 (494)
|||||+.+.+..
T Consensus 509 fspDg~tlFvni 520 (524)
T PF05787_consen 509 FSPDGRTLFVNI 520 (524)
T ss_pred ECCCCCEEEEEE
Confidence 899999876654
No 443
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=42.34 E-value=3.3e+02 Score=26.44 Aligned_cols=18 Identities=11% Similarity=0.261 Sum_probs=14.2
Q ss_pred ceeeCCCCCEEEEEEecc
Q 011049 99 MMTRTSTGTNVIAKIKKE 116 (494)
Q Consensus 99 ~~~~spDG~~i~~~~~~~ 116 (494)
+++|+|+|++|+..+..+
T Consensus 101 ~v~WtPeGRRLltgs~SG 118 (464)
T KOG0284|consen 101 VVRWTPEGRRLLTGSQSG 118 (464)
T ss_pred eEEEcCCCceeEeecccc
Confidence 567999999998876543
No 444
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=42.29 E-value=2.6e+02 Score=25.29 Aligned_cols=64 Identities=14% Similarity=0.087 Sum_probs=37.4
Q ss_pred ccceecC--CCceEEEEe-e-e--eccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEec
Q 011049 44 RSVSWCD--DSLALVNET-W-Y--KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 115 (494)
Q Consensus 44 ~~p~wsp--Dg~~i~f~~-~-~--~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~ 115 (494)
.+..||| +++ |+..+ + + .+ +.+|++++++++. ..+.....+..| +-+-++||+.-..+++...+
T Consensus 12 ysvqfSPf~~nr-LavAt~q~yGl~G-~G~L~ile~~~~~-gi~e~~s~d~~D-----~LfdV~Wse~~e~~~~~a~G 81 (311)
T KOG0277|consen 12 YSVQFSPFVENR-LAVATAQHYGLAG-NGRLFILEVTDPK-GIQECQSYDTED-----GLFDVAWSENHENQVIAASG 81 (311)
T ss_pred ceeEecccccch-hheeehhhccccc-CceEEEEecCCCC-CeEEEEeeeccc-----ceeEeeecCCCcceEEEEec
Confidence 3678998 555 44443 3 2 23 7899999996331 223333333333 34445688888777777643
No 445
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=42.22 E-value=30 Score=31.43 Aligned_cols=28 Identities=11% Similarity=0.099 Sum_probs=20.7
Q ss_pred cceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 45 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 45 ~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
..+||||+..|||... ...|.+.|+-|.
T Consensus 48 kl~WSpD~tlLa~a~S----~G~i~vfdl~g~ 75 (282)
T PF15492_consen 48 KLAWSPDCTLLAYAES----TGTIRVFDLMGS 75 (282)
T ss_pred EEEECCCCcEEEEEcC----CCeEEEEecccc
Confidence 5689999999999753 345777777654
No 446
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=42.02 E-value=25 Score=34.30 Aligned_cols=64 Identities=17% Similarity=0.120 Sum_probs=39.6
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCccC--CcccHHHHHHHHHHHHHH
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVYA--ARENVMHVIWETDRWLQK 481 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~--~~~~~~~~~~~~~~fl~~ 481 (494)
+.|++|+.|.-|..- .+....+.+.+..+|..+-.+-.||.|+... ..++.......+++||..
T Consensus 189 p~P~VIv~gGlDs~q---eD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQ---EDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLAS 254 (411)
T ss_dssp -EEEEEEE--TTS-G---GGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCcchhH---HHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhc
Confidence 479999999999974 2333344456788899888888999988632 123344677889999865
No 447
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=40.81 E-value=38 Score=31.07 Aligned_cols=68 Identities=15% Similarity=0.210 Sum_probs=46.3
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCC-cEEEEEcCCCCCc--cCCcccHHHHHHHHHHHHHHhcC
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGA-LSRLVLLPFEHHV--YAARENVMHVIWETDRWLQKYCL 484 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~H~--~~~~~~~~~~~~~~~~fl~~~l~ 484 (494)
++.++-+-||+|.+.- ..|++.......+--. .....+-|+.||. |.+...++..+.++.+|+.++-.
T Consensus 339 ~~aL~tvEGEnDDIsg--vGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~ 409 (415)
T COG4553 339 NVALFTVEGENDDISG--VGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDR 409 (415)
T ss_pred ceeEEEeecccccccc--cchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCc
Confidence 3778999999999876 6666544443332111 1245677899996 45555566788899999998854
No 448
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=40.39 E-value=1e+02 Score=30.29 Aligned_cols=99 Identities=13% Similarity=0.090 Sum_probs=62.5
Q ss_pred CCCCCCCCCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeec
Q 011049 7 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR 86 (494)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~ 86 (494)
.|+.-..=++.|.+=+++. .|+....|...++...+.+|+.+|.+|+-..- ...+.+.|.-+| +.++.+..
T Consensus 246 ~G~~LatG~~~G~~riw~~---~G~l~~tl~~HkgPI~slKWnk~G~yilS~~v----D~ttilwd~~~g--~~~q~f~~ 316 (524)
T KOG0273|consen 246 DGTLLATGSEDGEARIWNK---DGNLISTLGQHKGPIFSLKWNKKGTYILSGGV----DGTTILWDAHTG--TVKQQFEF 316 (524)
T ss_pred CCCeEEEeecCcEEEEEec---CchhhhhhhccCCceEEEEEcCCCCEEEeccC----CccEEEEeccCc--eEEEeeee
Confidence 3454455566777777777 77888888888888889999999999886542 234556666655 66666554
Q ss_pred ccc---cc-cCCCCCCceeeCCCCCEEEEEEec
Q 011049 87 VFE---NV-YSDPGSPMMTRTSTGTNVIAKIKK 115 (494)
Q Consensus 87 ~~~---~~-~~~~~~~~~~~spDG~~i~~~~~~ 115 (494)
... |. ..+-..+ .+-++||...+|....
T Consensus 317 ~s~~~lDVdW~~~~~F-~ts~td~~i~V~kv~~ 348 (524)
T KOG0273|consen 317 HSAPALDVDWQSNDEF-ATSSTDGCIHVCKVGE 348 (524)
T ss_pred ccCCccceEEecCceE-eecCCCceEEEEEecC
Confidence 321 10 1111222 2357888877776643
No 449
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=40.03 E-value=42 Score=34.07 Aligned_cols=36 Identities=31% Similarity=0.471 Sum_probs=28.0
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHh
Q 011049 329 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH 364 (494)
Q Consensus 329 ~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~ 364 (494)
...++.|.+.+.-|...|.-+||||||.++=.++..
T Consensus 511 ~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLld 546 (697)
T KOG2029|consen 511 NELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLD 546 (697)
T ss_pred HHHHHHHHHhccCCCCceEEEecccchHHHHHHHHH
Confidence 356667777777777889999999999988766653
No 450
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=39.44 E-value=42 Score=30.08 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=27.9
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 330 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 330 ~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
-++++|.+++. -++.-.+.|-|+|+..+..+++..
T Consensus 16 GVl~~L~e~gi-~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 16 GVLSLLIEAGV-INETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHHcCC-CCCCCEEEEEcHHHHHHHHHHcCC
Confidence 56778888874 344568999999999999988865
No 451
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=39.08 E-value=70 Score=30.86 Aligned_cols=30 Identities=17% Similarity=0.258 Sum_probs=20.0
Q ss_pred cccccceecCCCceEEEEeeeeccceEEEEEc
Q 011049 41 LRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 72 (494)
Q Consensus 41 ~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~ 72 (494)
....+..|||.|-.|+-.+..+. -+||-+.
T Consensus 346 k~I~~V~fsPNGy~lATgs~Dnt--~kVWDLR 375 (459)
T KOG0272|consen 346 KEILSVAFSPNGYHLATGSSDNT--CKVWDLR 375 (459)
T ss_pred cceeeEeECCCceEEeecCCCCc--EEEeeec
Confidence 34567899999988886654332 4555553
No 452
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=38.95 E-value=1.3e+02 Score=31.19 Aligned_cols=65 Identities=5% Similarity=-0.050 Sum_probs=35.6
Q ss_pred cccccceecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 41 LRFRSVSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 41 ~~~~~p~wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
+..+..+-||+|+.|+-...... ....|++-....=. +...|-..+... .. +.|||||++|+-.+
T Consensus 526 yEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~-~~~~L~~HsLTV-----T~--l~FSpdg~~LLsvs 591 (764)
T KOG1063|consen 526 YEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWL-QVQELEGHSLTV-----TR--LAFSPDGRYLLSVS 591 (764)
T ss_pred eeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchh-hhheecccceEE-----EE--EEECCCCcEEEEee
Confidence 44566789999998876543222 35566666554320 111122222111 11 22999999998766
No 453
>PRK13614 lipoprotein LpqB; Provisional
Probab=38.79 E-value=4.7e+02 Score=27.17 Aligned_cols=76 Identities=9% Similarity=0.052 Sum_probs=38.8
Q ss_pred CCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCce---EeeecccccccCCCCCC--ceeeCC
Q 011049 30 GEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR---VLFDRVFENVYSDPGSP--MMTRTS 104 (494)
Q Consensus 30 ~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~---~lt~~~~~~~~~~~~~~--~~~~sp 104 (494)
++..+.+..+. ....|+|.++| ++.-. .. +....+.++..++. .+.. ...-.. +... +.. .+..|+
T Consensus 373 g~~~~~~~~g~-~Lt~PS~d~~g-~vWtv-~~-g~~~~vv~~~~~g~-~~~~~~~~~~v~~--~~l~--g~~I~~lrvSr 443 (573)
T PRK13614 373 GQPARALTSGS-TLTRPSFSPQD-WVWTA-GP-GGNGRIVAYRPTGV-AEGAQAPTVTLTA--DWLA--GRTVKELRVSR 443 (573)
T ss_pred CCcceeeecCC-CccCCcccCCC-CEEEe-eC-CCCceEEEEecCCC-cccccccceeecc--cccC--CCeeEEEEECC
Confidence 34455555543 47899999998 65533 22 22346666654431 1111 101000 0000 111 244799
Q ss_pred CCCEEEEEEe
Q 011049 105 TGTNVIAKIK 114 (494)
Q Consensus 105 DG~~i~~~~~ 114 (494)
||.+++....
T Consensus 444 DG~R~Avi~~ 453 (573)
T PRK13614 444 EGVRALVISE 453 (573)
T ss_pred CccEEEEEEE
Confidence 9999999874
No 454
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=38.46 E-value=3.1e+02 Score=29.57 Aligned_cols=34 Identities=12% Similarity=0.286 Sum_probs=20.5
Q ss_pred CCCCCeeccccccccccceecCCCceEEEEeeeec
Q 011049 29 EGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT 63 (494)
Q Consensus 29 ~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~ 63 (494)
+.|+|.+-..-+....+..|-|. +.+++..|.-+
T Consensus 48 dtGEPqr~Vt~P~hatSLCWHpe-~~vLa~gwe~g 81 (1416)
T KOG3617|consen 48 DTGEPQRDVTYPVHATSLCWHPE-EFVLAQGWEMG 81 (1416)
T ss_pred cCCCCCcccccceehhhhccChH-HHHHhhccccc
Confidence 55677765555566667889986 34444444433
No 455
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=35.70 E-value=4.9e+02 Score=26.47 Aligned_cols=103 Identities=8% Similarity=0.058 Sum_probs=51.5
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccc---cceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccc
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFR---SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFEN 90 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~---~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~ 90 (494)
=++.|.|++.++ .+|+.+.-...+..+. ...|+-+- +..|+... ..++-.++.... .-.++......
T Consensus 76 gt~~g~v~~ys~---~~g~it~~~st~~h~~~v~~~~~~~~~-~ciyS~~a---d~~v~~~~~~~~--~~~~~~~~~~~- 145 (541)
T KOG4547|consen 76 GTPQGSVLLYSV---AGGEITAKLSTDKHYGNVNEILDAQRL-GCIYSVGA---DLKVVYILEKEK--VIIRIWKEQKP- 145 (541)
T ss_pred ecCCccEEEEEe---cCCeEEEEEecCCCCCcceeeeccccc-CceEecCC---ceeEEEEecccc--eeeeeeccCCC-
Confidence 356678888888 6666554333222222 23344443 33444322 223333333322 22333332222
Q ss_pred ccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEe
Q 011049 91 VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 154 (494)
Q Consensus 91 ~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 154 (494)
.-..+|.||||+.++..+. +|-++|.++++..+-+.
T Consensus 146 -----~~~sl~is~D~~~l~~as~-----------------------~ik~~~~~~kevv~~ft 181 (541)
T KOG4547|consen 146 -----LVSSLCISPDGKILLTASR-----------------------QIKVLDIETKEVVITFT 181 (541)
T ss_pred -----ccceEEEcCCCCEEEeccc-----------------------eEEEEEccCceEEEEec
Confidence 1223457999987665431 38888988887655433
No 456
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=35.11 E-value=1.4e+02 Score=28.08 Aligned_cols=90 Identities=10% Similarity=0.008 Sum_probs=52.6
Q ss_pred CCCccceeeeccCCCCCCCCC-eeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 13 EVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 13 ~~~~~~~i~~~~~~~~~~~~~-~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
.-+++|.|+++|+ ..++. ..+-.........++-|+--.++.+...+. .-++|-+. .. ....++-.-....
T Consensus 110 ~~G~~GvIrVid~---~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~-svRlwnI~--~~--~Cv~VfGG~egHr 181 (385)
T KOG1034|consen 110 AGGYLGVIRVIDV---VSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDH-SVRLWNIQ--TD--VCVAVFGGVEGHR 181 (385)
T ss_pred eecceeEEEEEec---chhhhccceeccCccchhhhcCCCCCcEEEEecCCc-eEEEEecc--CC--eEEEEeccccccc
Confidence 3578999999998 44443 345555567778899999877787766554 45566553 22 3333332211110
Q ss_pred cCCCCCCceeeCCCCCEEEEEE
Q 011049 92 YSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~~~~ 113 (494)
. .-..+-||+||.+|+-..
T Consensus 182 d---eVLSvD~~~~gd~i~ScG 200 (385)
T KOG1034|consen 182 D---EVLSVDFSLDGDRIASCG 200 (385)
T ss_pred C---cEEEEEEcCCCCeeeccC
Confidence 0 000122899999887543
No 457
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=35.06 E-value=3.4e+02 Score=24.51 Aligned_cols=152 Identities=9% Similarity=-0.085 Sum_probs=0.0
Q ss_pred cccccCCCCCCCCCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCce
Q 011049 2 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR 81 (494)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~ 81 (494)
++|+-+..-..-..+.+.|=|||. .+++.++-...+-...+.-.|+||+.|.-.- .+.|--.++. ...
T Consensus 149 v~wc~eD~~iLSSadd~tVRLWD~---rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~-----gssV~Fwdak----sf~ 216 (334)
T KOG0278|consen 149 VLWCHEDKCILSSADDKTVRLWDH---RTGTEVQSLEFNSPVTSLEVSQDGRILTIAY-----GSSVKFWDAK----SFG 216 (334)
T ss_pred EEEeccCceEEeeccCCceEEEEe---ccCcEEEEEecCCCCcceeeccCCCEEEEec-----CceeEEeccc----ccc
Q ss_pred EeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeecCCCceEEEEeeCcchhh
Q 011049 82 VLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYF 161 (494)
Q Consensus 82 ~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~ 161 (494)
.|....-.-+-.++. .+|+-...+.-. +.. .++++|.++|+..-.....-.
T Consensus 217 ~lKs~k~P~nV~SAS-----L~P~k~~fVaGg-------------------ed~--~~~kfDy~TgeEi~~~nkgh~--- 267 (334)
T KOG0278|consen 217 LLKSYKMPCNVESAS-----LHPKKEFFVAGG-------------------EDF--KVYKFDYNTGEEIGSYNKGHF--- 267 (334)
T ss_pred ceeeccCcccccccc-----ccCCCceEEecC-------------------cce--EEEEEeccCCceeeecccCCC---
Q ss_pred hheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCC
Q 011049 162 ETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 203 (494)
Q Consensus 162 ~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~ 203 (494)
.......||||| .++...|-.-.-.||...+..
T Consensus 268 -------gpVhcVrFSPdG--E~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 268 -------GPVHCVRFSPDG--ELYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred -------CceEEEEECCCC--ceeeccCCCceEEEEEecCCC
No 458
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=34.88 E-value=1.4e+02 Score=31.27 Aligned_cols=72 Identities=17% Similarity=0.171 Sum_probs=35.6
Q ss_pred ccccccccceecCCCceEEEEeeeeccceEEE----EEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 38 KLDLRFRSVSWCDDSLALVNETWYKTSQTRTW----LVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 38 ~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~----~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
..++..-+.+-+||++.++-.+...+ -.+| +.+ .+|. ..+.|.-....-......-..+..||||++++...
T Consensus 452 AHdgaIWsi~~~pD~~g~vT~saDkt--VkfWdf~l~~~-~~gt-~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsL 527 (888)
T KOG0306|consen 452 AHDGAIWSISLSPDNKGFVTGSADKT--VKFWDFKLVVS-VPGT-QKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSL 527 (888)
T ss_pred ccccceeeeeecCCCCceEEecCCcE--EEEEeEEEEec-cCcc-cceeeeeccceEEeccccEEEEEEcCCCcEEEEEe
Confidence 34555566778899998776654332 2233 223 3331 22322221111000000122334799999999876
No 459
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=34.72 E-value=3.1e+02 Score=24.55 Aligned_cols=63 Identities=13% Similarity=0.210 Sum_probs=37.3
Q ss_pred eeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccc
Q 011049 19 IIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF 88 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~ 88 (494)
.++++|+ .+|+..+ +-...+.....+|--++ .++++...+. .-++|-..-. +.+|.++.++..
T Consensus 82 ~v~vwDV---~TGkv~Rr~rgH~aqVNtV~fNees-SVv~SgsfD~-s~r~wDCRS~--s~ePiQildea~ 145 (307)
T KOG0316|consen 82 AVQVWDV---NTGKVDRRFRGHLAQVNTVRFNEES-SVVASGSFDS-SVRLWDCRSR--SFEPIQILDEAK 145 (307)
T ss_pred eEEEEEc---ccCeeeeecccccceeeEEEecCcc-eEEEeccccc-eeEEEEcccC--CCCccchhhhhc
Confidence 7889999 6666544 44444555566776555 4555544333 3455554443 447888776553
No 460
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=34.29 E-value=4.9e+02 Score=26.03 Aligned_cols=38 Identities=18% Similarity=0.183 Sum_probs=24.7
Q ss_pred CCCCCcEEEEecChHHHHHHHHHHhCCCceeEEEeCCCCC
Q 011049 340 VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 379 (494)
Q Consensus 340 ~~d~~ri~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 379 (494)
.+++++|.+...+..+.-.+..+...|. ..++.-.|.+
T Consensus 117 ~v~p~~Ivit~G~t~al~~l~~~l~~pG--D~Vlv~~P~Y 154 (447)
T PLN02607 117 RFDPDRIVLTAGATAANELLTFILADPG--DALLVPTPYY 154 (447)
T ss_pred CcCHHHeEEcCChHHHHHHHHHHhCCCC--CEEEEcCCCC
Confidence 3799999999888888665554444443 4455555543
No 461
>PRK13615 lipoprotein LpqB; Provisional
Probab=33.91 E-value=4.4e+02 Score=27.24 Aligned_cols=124 Identities=13% Similarity=0.037 Sum_probs=0.0
Q ss_pred cccccCCCC-CCCCCccceeeeccCCCCCCCCCeecccccc---------------ccccceecCCCceEEEEeeeeccc
Q 011049 2 VEAQDRGDA-NVEVSPRDIIYTQPAEPAEGEKPEILHKLDL---------------RFRSVSWCDDSLALVNETWYKTSQ 65 (494)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~lt~~~~---------------~~~~p~wspDg~~i~f~~~~~~~~ 65 (494)
++.+.+.+. ..-....|-||..+- +...++..... ....++-|+||..++++...++ .
T Consensus 367 ~~~~~~~~Lt~PS~d~~g~vWtv~~-----g~~~~l~~~~~~G~~~~v~v~~~~~~~I~~lrvSrDG~R~Avi~~~~g-~ 440 (557)
T PRK13615 367 VLLDTRPGLVAPSLDAQGYVWSTPA-----SDPRGLVAWGPDGVGHPVAVSWTATGRVVSLEVARDGARVLVQLETGA-G 440 (557)
T ss_pred eeeccCCccccCcCcCCCCEEEEeC-----CCceEEEEecCCCceEEeeccccCCCeeEEEEeCCCccEEEEEEecCC-C
Q ss_pred eEEEEEcCCCCCCCceEe-eecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCC
Q 011049 66 TRTWLVCPGSKDVAPRVL-FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPE 133 (494)
Q Consensus 66 ~~~~~~~~~~g~~~~~~l-t~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~ 133 (494)
.+|++.-+.-++..++.| ++.-.--.... ....+.|..|++ |+........+....++..+|....
T Consensus 441 ~~V~va~V~R~~~~P~~L~~~p~~l~~~l~-~v~sl~W~~~~~-laVl~~~~~~~~~v~~v~v~g~~~~ 507 (557)
T PRK13615 441 PQLLVASIVRDGGVPTSLTTTPLELLASPG-TPLDATWVDELD-VATLTLAPDGERQVELHQVGGPSKD 507 (557)
T ss_pred CEEEEEEEEeCCCcceEeeeccEEcccCcC-cceeeEEcCCCE-EEEEeccCCCCceEEEEECCCcccc
No 462
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=33.62 E-value=2.7e+02 Score=25.47 Aligned_cols=45 Identities=18% Similarity=0.003 Sum_probs=29.4
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCcc
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY 462 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 462 (494)
+.+++++||..+..+. .......+.+.|.+.|..+-..-++ ||+-
T Consensus 26 ~~~vv~i~gg~~~~~g-~~~~~~~la~~l~~~G~~v~~~Dl~--G~G~ 70 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVG-SHRQFVLLARRLAEAGFPVLRFDYR--GMGD 70 (274)
T ss_pred CCeEEEEeCCccccCC-chhHHHHHHHHHHHCCCEEEEeCCC--CCCC
Confidence 3578999998887652 1333456788888888655544454 5653
No 463
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=33.60 E-value=58 Score=18.84 Aligned_cols=24 Identities=17% Similarity=0.343 Sum_probs=16.7
Q ss_pred ccccccccccceecCCCceEEEEe
Q 011049 36 LHKLDLRFRSVSWCDDSLALVNET 59 (494)
Q Consensus 36 lt~~~~~~~~p~wspDg~~i~f~~ 59 (494)
+..........+|+|+++.|+-.+
T Consensus 7 ~~~h~~~i~~i~~~~~~~~~~s~~ 30 (39)
T PF00400_consen 7 FRGHSSSINSIAWSPDGNFLASGS 30 (39)
T ss_dssp EESSSSSEEEEEEETTSSEEEEEE
T ss_pred EcCCCCcEEEEEEecccccceeeC
Confidence 344445566789999988877554
No 464
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=33.56 E-value=3.7e+02 Score=24.42 Aligned_cols=56 Identities=11% Similarity=0.118 Sum_probs=33.7
Q ss_pred CCCCCccceeeeccCCCCCCCCC-eecccccc--ccccceecCCCceEEEEeeeeccceEEEE
Q 011049 11 NVEVSPRDIIYTQPAEPAEGEKP-EILHKLDL--RFRSVSWCDDSLALVNETWYKTSQTRTWL 70 (494)
Q Consensus 11 ~~~~~~~~~i~~~~~~~~~~~~~-~~lt~~~~--~~~~p~wspDg~~i~f~~~~~~~~~~~~~ 70 (494)
++-+-..|+||++++ .+++. +..-+-+. .....+||+.-.-+++++.-++ .-+||-
T Consensus 31 ~yGl~G~G~L~ile~---~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDG-SLrl~d 89 (311)
T KOG0277|consen 31 HYGLAGNGRLFILEV---TDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDG-SLRLFD 89 (311)
T ss_pred hcccccCceEEEEec---CCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCc-eEEEec
Confidence 555778899999998 42222 22222121 2346789998777777776554 445554
No 465
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=33.09 E-value=80 Score=29.50 Aligned_cols=54 Identities=19% Similarity=0.110 Sum_probs=35.2
Q ss_pred ccceeeeccCCCCCCCCCeeccccc--cccccceecCCCceEEEEeeeeccceEEEEEcC
Q 011049 16 PRDIIYTQPAEPAEGEKPEILHKLD--LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 73 (494)
Q Consensus 16 ~~~~i~~~~~~~~~~~~~~~lt~~~--~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~ 73 (494)
..|.||++|+...+...-+.||... ....+.+||-||..|+...+. .-||+.|.
T Consensus 327 q~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd----~~Vwrwdr 382 (385)
T KOG1034|consen 327 QSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDD----GTVWRWDR 382 (385)
T ss_pred CCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCC----CcEEEEEe
Confidence 4578999999433333334555443 344577899999999987643 34777653
No 466
>PLN00181 protein SPA1-RELATED; Provisional
Probab=32.68 E-value=4.5e+02 Score=28.65 Aligned_cols=89 Identities=12% Similarity=0.111 Sum_probs=41.7
Q ss_pred CccceeeeccCCCCCCCC-C-eeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeeccccccc
Q 011049 15 SPRDIIYTQPAEPAEGEK-P-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY 92 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~-~-~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~ 92 (494)
+..+.|+++|+ ...+ + ..+...........|+ |++.|+-.+ .++ .-.+|-+...........+....+...
T Consensus 637 s~dg~I~iwD~---~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s-~D~-~ikiWd~~~~~~~~~~~~l~~~~gh~~- 709 (793)
T PLN00181 637 SADHKVYYYDL---RNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSS-TDN-TLKLWDLSMSISGINETPLHSFMGHTN- 709 (793)
T ss_pred eCCCeEEEEEC---CCCCccceEecCCCCCEEEEEEe-CCCEEEEEE-CCC-EEEEEeCCCCccccCCcceEEEcCCCC-
Confidence 34567888888 4332 2 2233333344567787 677665443 222 234554432111001122222222110
Q ss_pred CCCCCCceeeCCCCCEEEEEE
Q 011049 93 SDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 93 ~~~~~~~~~~spDG~~i~~~~ 113 (494)
....+.|+|+|..|+..+
T Consensus 710 ---~i~~v~~s~~~~~lasgs 727 (793)
T PLN00181 710 ---VKNFVGLSVSDGYIATGS 727 (793)
T ss_pred ---CeeEEEEcCCCCEEEEEe
Confidence 112345899998776654
No 467
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=32.54 E-value=42 Score=33.02 Aligned_cols=62 Identities=21% Similarity=0.258 Sum_probs=39.4
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCC----------------------CcEEEEEcCCCCCccCCcccHHHHH
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHG----------------------ALSRLVLLPFEHHVYAARENVMHVI 472 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g----------------------~~~~~~~~~~~~H~~~~~~~~~~~~ 472 (494)
..++||.+|..|..|| ...++.+.+.|.=.+ ....++++.++||.... ..++..+
T Consensus 330 ~irVLiy~Gd~D~i~n--~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~-dqP~~a~ 406 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICN--FLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQ-DQPEAAL 406 (415)
T ss_dssp T-EEEEEEETT-SSS---HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHH-HSHHHHH
T ss_pred cceeEEeccCCCEEEE--eccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChh-hCHHHHH
Confidence 3899999999999987 888888888875211 13567888899997542 3444555
Q ss_pred HHHHHHH
Q 011049 473 WETDRWL 479 (494)
Q Consensus 473 ~~~~~fl 479 (494)
+.+.+|+
T Consensus 407 ~m~~~fl 413 (415)
T PF00450_consen 407 QMFRRFL 413 (415)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5555554
No 468
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=32.37 E-value=92 Score=19.72 Aligned_cols=29 Identities=14% Similarity=0.144 Sum_probs=21.2
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCC
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 75 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~ 75 (494)
.....|||....||..+. .++|++..+++
T Consensus 14 v~~~~w~P~mdLiA~~t~----~g~v~v~Rl~~ 42 (47)
T PF12894_consen 14 VSCMSWCPTMDLIALGTE----DGEVLVYRLNW 42 (47)
T ss_pred EEEEEECCCCCEEEEEEC----CCeEEEEECCC
Confidence 346689999999888753 45677777754
No 469
>PRK13614 lipoprotein LpqB; Provisional
Probab=31.85 E-value=1.6e+02 Score=30.40 Aligned_cols=67 Identities=15% Similarity=0.111 Sum_probs=39.2
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCC-CCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEE
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPG-SKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 112 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~-~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~ 112 (494)
...++-|+||..++++...++ ..+|++--+. +++++++.|++.-.......+.. +.|..|++-++..
T Consensus 436 I~~lrvSrDG~R~Avi~~~~g-~~~V~va~V~R~~~G~P~~L~~~~~~~~~~~~~s--l~W~~~~sl~V~~ 503 (573)
T PRK13614 436 VKELRVSREGVRALVISEQNG-KSRVQVAGIVRNEDGTPRELTAPITLAADSDADT--GAWVGDSTVVVTK 503 (573)
T ss_pred eEEEEECCCccEEEEEEEeCC-ccEEEEEEEEeCCCCCeEEccCceecccCCCcce--eEEcCCCEEEEEe
Confidence 667889999999999876555 5567764432 22336788865422100011122 3398888744443
No 470
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=31.79 E-value=2.1e+02 Score=29.74 Aligned_cols=36 Identities=11% Similarity=0.072 Sum_probs=28.5
Q ss_pred ccceecC-CCceEEEEeeeeccceEEEEEcCCCCCCCceEeeec
Q 011049 44 RSVSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR 86 (494)
Q Consensus 44 ~~p~wsp-Dg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~ 86 (494)
..|+-+| |+..|+|+. ..++|+..+..+ +.++||..
T Consensus 203 ~dP~lcP~~~~fia~i~-----~~dl~V~n~~~~--~ekrlt~~ 239 (867)
T KOG2281|consen 203 MDPKLCPADPDFIAYIK-----VCDLWVLNILTG--EEKRLTYI 239 (867)
T ss_pred cCcccCCCCccceeeee-----hhhhhhhhhhhc--hhhceeee
Confidence 4677887 589999974 578999999887 77888764
No 471
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=31.44 E-value=3.6e+02 Score=23.61 Aligned_cols=54 Identities=13% Similarity=0.010 Sum_probs=29.3
Q ss_pred CccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 15 SPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
+..+.||.+|. .+|+..--...+.....+. ..++..|++.+ . ...++.+++.+|
T Consensus 43 ~~~~~l~~~d~---~tG~~~W~~~~~~~~~~~~-~~~~~~v~v~~---~-~~~l~~~d~~tG 96 (238)
T PF13360_consen 43 SGDGNLYALDA---KTGKVLWRFDLPGPISGAP-VVDGGRVYVGT---S-DGSLYALDAKTG 96 (238)
T ss_dssp ETTSEEEEEET---TTSEEEEEEECSSCGGSGE-EEETTEEEEEE---T-TSEEEEEETTTS
T ss_pred cCCCEEEEEEC---CCCCEEEEeecccccccee-eeccccccccc---c-eeeeEecccCCc
Confidence 36677888887 6665432222222222222 33455555543 1 348999998776
No 472
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=31.30 E-value=1.2e+02 Score=30.10 Aligned_cols=65 Identities=14% Similarity=0.012 Sum_probs=40.6
Q ss_pred CCCCccceeeeccCCCCCCCC-CeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEee
Q 011049 12 VEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 84 (494)
Q Consensus 12 ~~~~~~~~i~~~~~~~~~~~~-~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt 84 (494)
+.+++.-.|++.|. ...+ ..+|+.. ...+..+|+|||..|+--+ .+.+|+.+|+.+-....+.+.
T Consensus 225 vsVG~Dkki~~yD~---~s~~s~~~l~y~-~Plstvaf~~~G~~L~aG~----s~G~~i~YD~R~~k~Pv~v~s 290 (673)
T KOG4378|consen 225 VSVGYDKKINIYDI---RSQASTDRLTYS-HPLSTVAFSECGTYLCAGN----SKGELIAYDMRSTKAPVAVRS 290 (673)
T ss_pred EEecccceEEEeec---ccccccceeeec-CCcceeeecCCceEEEeec----CCceEEEEecccCCCCceEee
Confidence 34778889999998 2111 1223322 3456778999998776532 356899999987533333333
No 473
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=31.13 E-value=1.3e+02 Score=31.89 Aligned_cols=81 Identities=16% Similarity=0.143 Sum_probs=43.7
Q ss_pred ceeeeccCCC--CCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCC
Q 011049 18 DIIYTQPAEP--AEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 95 (494)
Q Consensus 18 ~~i~~~~~~~--~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~ 95 (494)
|+|.++.-+. .+.-..+.+.-.-......+||+||..|+-. ++..-+-+-.++++ . ++...+-
T Consensus 227 GrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSG----G~E~VLv~Wq~~T~--~-kqfLPRL-------- 291 (792)
T KOG1963|consen 227 GRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSG----GREGVLVLWQLETG--K-KQFLPRL-------- 291 (792)
T ss_pred CcEEEEeccccccccccceEEEecccccceeEEecCCceEeec----ccceEEEEEeecCC--C-ccccccc--------
Confidence 5677776532 2334555565554556688999999886642 22223333334444 4 3333332
Q ss_pred CCCc--eeeCCCCCEEEEEE
Q 011049 96 GSPM--MTRTSTGTNVIAKI 113 (494)
Q Consensus 96 ~~~~--~~~spDG~~i~~~~ 113 (494)
++|+ +.+|||+..-+...
T Consensus 292 gs~I~~i~vS~ds~~~sl~~ 311 (792)
T KOG1963|consen 292 GSPILHIVVSPDSDLYSLVL 311 (792)
T ss_pred CCeeEEEEEcCCCCeEEEEe
Confidence 2332 23899998554443
No 474
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=31.02 E-value=1e+02 Score=29.24 Aligned_cols=83 Identities=11% Similarity=0.035 Sum_probs=45.5
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPG 96 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~ 96 (494)
...|+|.|+ -.+.|.+-..-...-...+|+| ..+.|++.. +...+|..|..-= .++..+......-
T Consensus 209 DrsIvLyD~---R~~~Pl~KVi~~mRTN~IswnP--eafnF~~a~--ED~nlY~~DmR~l-~~p~~v~~dhvsA------ 274 (433)
T KOG0268|consen 209 DRSIVLYDL---RQASPLKKVILTMRTNTICWNP--EAFNFVAAN--EDHNLYTYDMRNL-SRPLNVHKDHVSA------ 274 (433)
T ss_pred CCceEEEec---ccCCccceeeeeccccceecCc--cccceeecc--ccccceehhhhhh-cccchhhccccee------
Confidence 347788888 4455544323334555789999 555666532 2567999987632 1333333322210
Q ss_pred CCceeeCCCCCEEEEEE
Q 011049 97 SPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 97 ~~~~~~spDG~~i~~~~ 113 (494)
-..+-+||-|+-++-.+
T Consensus 275 V~dVdfsptG~Efvsgs 291 (433)
T KOG0268|consen 275 VMDVDFSPTGQEFVSGS 291 (433)
T ss_pred EEEeccCCCcchhcccc
Confidence 00112799998766543
No 475
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=31.00 E-value=66 Score=34.73 Aligned_cols=53 Identities=17% Similarity=0.088 Sum_probs=40.8
Q ss_pred cceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcC
Q 011049 17 RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 73 (494)
Q Consensus 17 ~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~ 73 (494)
-+.|++++.+ +...|.+++..++....+.||-||+.|+-.|+.. ..++|-++.
T Consensus 154 ~~~iivW~~~--~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDR--siRlW~i~s 206 (967)
T KOG0974|consen 154 FGEIIVWKPH--EDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDR--SIRLWPIDS 206 (967)
T ss_pred cccEEEEecc--ccCCcceecccCCceEEEEEccCCcEEEEEecCc--ceeeeeccc
Confidence 3577777764 5577778999999999999999999999777532 467777753
No 476
>COG1647 Esterase/lipase [General function prediction only]
Probab=30.92 E-value=1.4e+02 Score=26.43 Aligned_cols=60 Identities=12% Similarity=0.081 Sum_probs=41.7
Q ss_pred CCCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCcc--CCcccHHHHHHHHHHHH
Q 011049 415 KKPILIIHGEVDDKVGLFPMQAERFFDALKGHGALSRLVLLPFEHHVY--AARENVMHVIWETDRWL 479 (494)
Q Consensus 415 ~~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~--~~~~~~~~~~~~~~~fl 479 (494)
+..+|++||=--. +.+.+.|.+.|+++|-.|..=.|||.||.. .......++++.+.+=.
T Consensus 15 ~~AVLllHGFTGt-----~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y 76 (243)
T COG1647 15 NRAVLLLHGFTGT-----PRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGY 76 (243)
T ss_pred CEEEEEEeccCCC-----cHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHH
Confidence 3679999997655 678899999999999877777788755542 11234455665554433
No 477
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=30.87 E-value=1.2e+02 Score=30.38 Aligned_cols=62 Identities=15% Similarity=0.114 Sum_probs=40.9
Q ss_pred CCEEEEecCCCCCCCCCHHHHHHHHHHHHhCCC---------------------cEEEEEcCCCCCccCCcccHHHHHHH
Q 011049 416 KPILIIHGEVDDKVGLFPMQAERFFDALKGHGA---------------------LSRLVLLPFEHHVYAARENVMHVIWE 474 (494)
Q Consensus 416 ~P~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~---------------------~~~~~~~~~~~H~~~~~~~~~~~~~~ 474 (494)
.++||..|+.|.+|| ...++.+.+.|.-..+ ...+..+.|+||..-. ...+..+..
T Consensus 364 ~rvliysGD~D~~~p--~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~-~~p~~al~m 440 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVP--FLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPY-DKPESALIM 440 (454)
T ss_pred eEEEEEeCCcceeCc--chhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCC-CCcHHHHHH
Confidence 799999999999998 8888888777752111 1445677799996532 223344444
Q ss_pred HHHHHH
Q 011049 475 TDRWLQ 480 (494)
Q Consensus 475 ~~~fl~ 480 (494)
+.+|+.
T Consensus 441 ~~~fl~ 446 (454)
T KOG1282|consen 441 FQRFLN 446 (454)
T ss_pred HHHHHc
Confidence 455554
No 478
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=30.78 E-value=2.1e+02 Score=26.45 Aligned_cols=45 Identities=9% Similarity=-0.030 Sum_probs=28.5
Q ss_pred HHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC---CceeEEEeCCC
Q 011049 333 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSG 377 (494)
Q Consensus 333 ~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p---~~~~a~v~~~~ 377 (494)
+++.+.+.-+.-|++++|.|.|++.+..+..... +.+.+++-..|
T Consensus 98 ~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~Gp 145 (289)
T PF10081_consen 98 ARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGP 145 (289)
T ss_pred HHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCC
Confidence 4455555555678999999999988866543221 34555554443
No 479
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=30.23 E-value=65 Score=30.46 Aligned_cols=92 Identities=12% Similarity=0.130 Sum_probs=48.1
Q ss_pred CCCCCCCccc-eeeeccCCCCCCCCCeecccccc-ccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeec
Q 011049 9 DANVEVSPRD-IIYTQPAEPAEGEKPEILHKLDL-RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR 86 (494)
Q Consensus 9 ~~~~~~~~~~-~i~~~~~~~~~~~~~~~lt~~~~-~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~ 86 (494)
.++|.....+ .||+.|..-. ..|.....+-. ......|||-|+.|+-.+. +. .|-+..+..+ ..+-++..
T Consensus 241 afnF~~a~ED~nlY~~DmR~l--~~p~~v~~dhvsAV~dVdfsptG~Efvsgsy-Dk---sIRIf~~~~~--~SRdiYht 312 (433)
T KOG0268|consen 241 AFNFVAANEDHNLYTYDMRNL--SRPLNVHKDHVSAVMDVDFSPTGQEFVSGSY-DK---SIRIFPVNHG--HSRDIYHT 312 (433)
T ss_pred ccceeeccccccceehhhhhh--cccchhhcccceeEEEeccCCCcchhccccc-cc---eEEEeecCCC--cchhhhhH
Confidence 3455543333 7888877211 12323322221 2235679999999885543 22 3555555655 44555443
Q ss_pred ccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 87 VFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 87 ~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
.... .-..+.||-|.++|+-.+
T Consensus 313 kRMq-----~V~~Vk~S~Dskyi~SGS 334 (433)
T KOG0268|consen 313 KRMQ-----HVFCVKYSMDSKYIISGS 334 (433)
T ss_pred hhhh-----eeeEEEEeccccEEEecC
Confidence 3322 122344999998776543
No 480
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=30.23 E-value=1.2e+02 Score=30.12 Aligned_cols=81 Identities=10% Similarity=0.047 Sum_probs=0.0
Q ss_pred CccceeeeccCCCCCCCCCee---ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccc
Q 011049 15 SPRDIIYTQPAEPAEGEKPEI---LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 91 (494)
Q Consensus 15 ~~~~~i~~~~~~~~~~~~~~~---lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~ 91 (494)
.+...|=+||+ ....++. ||.........+.|||.| +.|.+-.++ .|-+-|+-.. ...+-+....+
T Consensus 484 GeastlsiWDL---AapTprikaeltssapaCyALa~spDak-vcFsccsdG---nI~vwDLhnq--~~VrqfqGhtD-- 552 (705)
T KOG0639|consen 484 GEASTLSIWDL---AAPTPRIKAELTSSAPACYALAISPDAK-VCFSCCSDG---NIAVWDLHNQ--TLVRQFQGHTD-- 552 (705)
T ss_pred cccceeeeeec---cCCCcchhhhcCCcchhhhhhhcCCccc-eeeeeccCC---cEEEEEcccc--eeeecccCCCC--
Q ss_pred cCCCCCCceeeCCCCCEEE
Q 011049 92 YSDPGSPMMTRTSTGTNVI 110 (494)
Q Consensus 92 ~~~~~~~~~~~spDG~~i~ 110 (494)
+.-.+-.|+||++|.
T Consensus 553 ----GascIdis~dGtklW 567 (705)
T KOG0639|consen 553 ----GASCIDISKDGTKLW 567 (705)
T ss_pred ----CceeEEecCCCceee
No 481
>PRK13613 lipoprotein LpqB; Provisional
Probab=30.19 E-value=5.7e+02 Score=26.79 Aligned_cols=64 Identities=8% Similarity=-0.048 Sum_probs=36.1
Q ss_pred ccccceecCCCceEEEEeeeeccceEEEEEcCCC-CCCCceEeeeccc--ccccCCCCCCceeeCCCCCEEEE
Q 011049 42 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS-KDVAPRVLFDRVF--ENVYSDPGSPMMTRTSTGTNVIA 111 (494)
Q Consensus 42 ~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~-g~~~~~~lt~~~~--~~~~~~~~~~~~~~spDG~~i~~ 111 (494)
....++-|+||..++++...++ ..+||+--+.- +++. +.|++.-. ... .++. .+.|..|++ |+.
T Consensus 456 ~I~~lrvSrDG~RvAvv~~~~g-~~~v~va~V~R~~~G~-~~l~~~~~l~~~l-~~v~--~~~W~~~~s-L~V 522 (599)
T PRK13613 456 RVVAVRVARDGVRVALIVEKDG-RRSLQIGRIVRDAKAV-VSVEEFRSLAPEL-EDVT--DMSWAGDSQ-LVV 522 (599)
T ss_pred EeEEEEECCCccEEEEEEecCC-CcEEEEEEEEeCCCCc-EEeeccEEeccCC-Cccc--eeEEcCCCE-EEE
Confidence 4567889999999999876544 45666554431 1223 55654321 111 0112 233988887 444
No 482
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=29.40 E-value=92 Score=18.39 Aligned_cols=24 Identities=13% Similarity=0.018 Sum_probs=16.0
Q ss_pred CCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 50 DDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 50 pDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
|||+.|+. +++. ...|.++++.++
T Consensus 1 pd~~~lyv-~~~~--~~~v~~id~~~~ 24 (42)
T TIGR02276 1 PDGTKLYV-TNSG--SNTVSVIDTATN 24 (42)
T ss_pred CCCCEEEE-EeCC--CCEEEEEECCCC
Confidence 78887654 4432 467888888654
No 483
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=28.71 E-value=96 Score=31.74 Aligned_cols=29 Identities=17% Similarity=0.097 Sum_probs=23.0
Q ss_pred ccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 44 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 44 ~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
...+|-|||+.|++.- .++.|-++|+..|
T Consensus 66 ~sL~W~~DGkllaVg~----kdG~I~L~Dve~~ 94 (665)
T KOG4640|consen 66 ASLCWRPDGKLLAVGF----KDGTIRLHDVEKG 94 (665)
T ss_pred eeeeecCCCCEEEEEe----cCCeEEEEEccCC
Confidence 4678999999999753 2467999998866
No 484
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=28.11 E-value=3.4e+02 Score=26.70 Aligned_cols=59 Identities=17% Similarity=0.162 Sum_probs=28.7
Q ss_pred hHHHHHhCCeEEEeCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEec
Q 011049 289 SSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGH 351 (494)
Q Consensus 289 ~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~ 351 (494)
....|.+.|+.|+-+.. +....|....+ ... ..+++...+..+.........++.|.|.
T Consensus 138 Nl~~L~~~G~~ii~P~~-g~la~~~~g~g-r~~--~~~~I~~~~~~~~~~~~l~gk~vlITgG 196 (399)
T PRK05579 138 NLATLRSRGVEIIGPAS-GRLACGDVGPG-RMA--EPEEIVAAAERALSPKDLAGKRVLITAG 196 (399)
T ss_pred HHHHHHHCCCEEECCCC-ccccCCCcCCC-CCC--CHHHHHHHHHHHhhhcccCCCEEEEeCC
Confidence 45577889999885322 22111211111 111 1334444443333322345578999998
No 485
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=27.73 E-value=3.7e+02 Score=25.28 Aligned_cols=62 Identities=5% Similarity=-0.032 Sum_probs=34.7
Q ss_pred cccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEE
Q 011049 43 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 113 (494)
Q Consensus 43 ~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~ 113 (494)
...-+|++|++.|+...+ +.++-+....+.+ -.+..-.....+. .--.+.|+|-+.+|+-.+
T Consensus 13 itchAwn~drt~iAv~~~----~~evhiy~~~~~~-~w~~~htls~Hd~----~vtgvdWap~snrIvtcs 74 (361)
T KOG1523|consen 13 ITCHAWNSDRTQIAVSPN----NHEVHIYSMLGAD-LWEPAHTLSEHDK----IVTGVDWAPKSNRIVTCS 74 (361)
T ss_pred eeeeeecCCCceEEeccC----CceEEEEEecCCC-CceeceehhhhCc----ceeEEeecCCCCceeEcc
Confidence 344589999999998642 3466666666552 1222222111111 111245999998887654
No 486
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=27.52 E-value=64 Score=31.89 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=27.8
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCCCc
Q 011049 330 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL 368 (494)
Q Consensus 330 ~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p~~ 368 (494)
-+++.|.+++. .++ .|.|-|.|+.+++.+++..++.
T Consensus 90 GVLkaL~E~gl-~p~--vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 90 GVLKALFEANL-LPR--IISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred HHHHHHHHcCC-CCC--EEEEECHHHHHHHHHHcCCHHH
Confidence 55677888774 453 6999999999999998876543
No 487
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=27.49 E-value=94 Score=31.12 Aligned_cols=64 Identities=11% Similarity=0.086 Sum_probs=45.0
Q ss_pred cccCCCCCCCCCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCC
Q 011049 4 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 75 (494)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~ 75 (494)
|-..|+.-...+-.|.|-++.- .|.-...+..........+|.||+..|+|.. ..++++-++..
T Consensus 112 W~~dGtgLlt~GEDG~iKiWSr---sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~-----g~h~~IKpL~~ 175 (737)
T KOG1524|consen 112 WSPDGAGLLTAGEDGVIKIWSR---SGMLRSTVVQNEESIRCARWAPNSNSIVFCQ-----GGHISIKPLAA 175 (737)
T ss_pred cCCCCceeeeecCCceEEEEec---cchHHHHHhhcCceeEEEEECCCCCceEEec-----CCeEEEeeccc
Confidence 4456666667777888888876 5444344555555556778999999999974 46788777765
No 488
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=27.47 E-value=87 Score=26.33 Aligned_cols=35 Identities=23% Similarity=0.216 Sum_probs=26.6
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhCC
Q 011049 329 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP 366 (494)
Q Consensus 329 ~~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~p 366 (494)
.-+++.|.+++. . --.+.|-|+|+..+..++...+
T Consensus 14 ~Gvl~aL~e~gi-~--~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 14 VGVAKALRERGP-L--IDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHHcCC-C--CCEEEEECHHHHHHHHHHcCCC
Confidence 356677878764 2 4578999999999998888653
No 489
>PRK13690 hypothetical protein; Provisional
Probab=27.26 E-value=1.3e+02 Score=25.37 Aligned_cols=32 Identities=25% Similarity=0.362 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEecCh
Q 011049 322 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSY 353 (494)
Q Consensus 322 ~~~~~d~~~~v~~l~~~~~~d~~ri~i~G~S~ 353 (494)
+....++..+++.|.+...+.+..|+++|.|-
T Consensus 4 ~~i~~~~~~~~~El~~~a~l~~g~i~VvGcST 35 (184)
T PRK13690 4 EEIKKQTRQILEELLEQANLKPGQIFVLGCST 35 (184)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 44567788889889998888999999999995
No 490
>COG5169 HSF1 Heat shock transcription factor [Transcription]
Probab=27.26 E-value=41 Score=30.91 Aligned_cols=23 Identities=13% Similarity=0.297 Sum_probs=17.6
Q ss_pred ccccccccccceecCCCceEEEE
Q 011049 36 LHKLDLRFRSVSWCDDSLALVNE 58 (494)
Q Consensus 36 lt~~~~~~~~p~wspDg~~i~f~ 58 (494)
+...+..+-...|||||+.|++.
T Consensus 20 iLe~~e~~k~I~Ws~~G~sfvI~ 42 (282)
T COG5169 20 ILEEPEYYKLIQWSPDGRSFVIL 42 (282)
T ss_pred HhcCcccCCceEECCCCCEEEEe
Confidence 44555666778999999998875
No 491
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=26.57 E-value=2.2e+02 Score=20.81 Aligned_cols=39 Identities=5% Similarity=-0.107 Sum_probs=23.7
Q ss_pred CCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEc
Q 011049 31 EKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 72 (494)
Q Consensus 31 ~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~ 72 (494)
++.+.+..+-..-.+...|||++.|+..+.. ...|+++.
T Consensus 44 ~~~~~va~g~~~aNGI~~s~~~k~lyVa~~~---~~~I~vy~ 82 (86)
T PF01731_consen 44 KEVKVVASGFSFANGIAISPDKKYLYVASSL---AHSIHVYK 82 (86)
T ss_pred CEeEEeeccCCCCceEEEcCCCCEEEEEecc---CCeEEEEE
Confidence 4555555554444578899999887665532 23455554
No 492
>PF15525 DUF4652: Domain of unknown function (DUF4652)
Probab=26.51 E-value=4.2e+02 Score=22.80 Aligned_cols=72 Identities=15% Similarity=0.170 Sum_probs=41.1
Q ss_pred ceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeCCCCCEEEEEEeccCccceEEEEccCCCCCCCCCCceEeeec
Q 011049 65 QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI 144 (494)
Q Consensus 65 ~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~spDG~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~ 144 (494)
-+.||+.++.++ +..+|--......+ .|- .+.|--|-..++.... .-|.-..+. .||.+++
T Consensus 87 iGkIYIkn~~~~--~~~~L~i~~~~~k~-sPK--~i~WiDD~~L~vIIG~------------a~GTvS~GG--nLy~~nl 147 (200)
T PF15525_consen 87 IGKIYIKNLNNN--NWWSLQIDQNEEKY-SPK--YIEWIDDNNLAVIIGY------------AHGTVSKGG--NLYKYNL 147 (200)
T ss_pred ceeEEEEecCCC--ceEEEEecCccccc-CCc--eeEEecCCcEEEEEcc------------ccceEccCC--eEEEEEc
Confidence 479999999987 55655333322111 122 2226655543333321 223223333 4999999
Q ss_pred CCCceEEEEee
Q 011049 145 NTGSKERIWES 155 (494)
Q Consensus 145 ~~g~~~~l~~~ 155 (494)
.+|+.+.|+..
T Consensus 148 ~tg~~~~ly~~ 158 (200)
T PF15525_consen 148 NTGNLTELYEW 158 (200)
T ss_pred cCCceeEeeec
Confidence 99999888774
No 493
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=26.50 E-value=60 Score=34.74 Aligned_cols=47 Identities=9% Similarity=0.003 Sum_probs=32.7
Q ss_pred ecCCCceEEEEeeeec-cceEEEEEcCCCCCCCceEeeecccccccCCCCCCceeeC
Q 011049 48 WCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRT 103 (494)
Q Consensus 48 wspDg~~i~f~~~~~~-~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~~~~~~s 103 (494)
-||||+.++.....+. +..++|+-... ..+++.++...+ ..|.+||-
T Consensus 243 lSpDGtv~a~a~~dG~v~f~Qiyi~g~~----~~rclhewkphd-----~~p~vC~l 290 (1283)
T KOG1916|consen 243 LSPDGTVFAWAISDGSVGFYQIYITGKI----VHRCLHEWKPHD-----KHPRVCWL 290 (1283)
T ss_pred eCCCCcEEEEeecCCccceeeeeeeccc----cHhhhhccCCCC-----CCCceeee
Confidence 8999998887654322 36778877654 667887776665 67777774
No 494
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=26.45 E-value=2.9e+02 Score=26.94 Aligned_cols=61 Identities=7% Similarity=0.064 Sum_probs=36.2
Q ss_pred CCccceeeeccCCCCCCCCCeeccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCC
Q 011049 14 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 76 (494)
Q Consensus 14 ~~~~~~i~~~~~~~~~~~~~~~lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g 76 (494)
-+..+.|.|+|+.... ..+..+-..+.......|||.-..|+-++-.++ .-.+|-++--+.
T Consensus 291 ~S~D~tV~LwDlRnL~-~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~-rl~vWDls~ig~ 351 (422)
T KOG0264|consen 291 GSADKTVALWDLRNLN-KPLHTFEGHEDEVFQVEWSPHNETVLASSGTDR-RLNVWDLSRIGE 351 (422)
T ss_pred ccCCCcEEEeechhcc-cCceeccCCCcceEEEEeCCCCCceeEecccCC-cEEEEecccccc
Confidence 3556688888882111 122223334445567889999988887765444 456676654443
No 495
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=26.04 E-value=1e+02 Score=28.42 Aligned_cols=34 Identities=18% Similarity=0.204 Sum_probs=23.5
Q ss_pred HHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHHhC
Q 011049 330 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA 365 (494)
Q Consensus 330 ~~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~~~ 365 (494)
+..+.+.+.+.+.| -+++|||.|=+.++.++..-
T Consensus 71 al~~~l~~~g~i~p--~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 71 ILYLKLKEQGGLKP--DFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHHHHcCCCCC--CEEeecCHHHHHHHHHhCCC
Confidence 33444555554555 48999999999988877543
No 496
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=25.79 E-value=5.4e+02 Score=23.90 Aligned_cols=80 Identities=6% Similarity=-0.041 Sum_probs=41.9
Q ss_pred eeeeccCCCCCCCCCee-ccccccccccceecCCCceEEEEeeeeccceEEEEEcCCCCCCCceEeeecccccccCCCCC
Q 011049 19 IIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGS 97 (494)
Q Consensus 19 ~i~~~~~~~~~~~~~~~-lt~~~~~~~~p~wspDg~~i~f~~~~~~~~~~~~~~~~~~g~~~~~~lt~~~~~~~~~~~~~ 97 (494)
.-+|+|+ ..+..++ ....+......+|-|+|-.|+--++.. --++|-+..+ ....++..+.... +-.
T Consensus 210 ~aklWD~---R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~--tcRlyDlRaD----~~~a~ys~~~~~~---git 277 (343)
T KOG0286|consen 210 SAKLWDV---RSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDA--TCRLYDLRAD----QELAVYSHDSIIC---GIT 277 (343)
T ss_pred ceeeeec---cCcceeEeecccccccceEEEccCCCeeeecCCCc--eeEEEeecCC----cEEeeeccCcccC---Cce
Confidence 4456666 3345555 444455567889999998766544332 2456555443 2244444332221 111
Q ss_pred CceeeCCCCCEEEEE
Q 011049 98 PMMTRTSTGTNVIAK 112 (494)
Q Consensus 98 ~~~~~spDG~~i~~~ 112 (494)
.+.+|..|+ ++|.
T Consensus 278 -Sv~FS~SGR-lLfa 290 (343)
T KOG0286|consen 278 -SVAFSKSGR-LLFA 290 (343)
T ss_pred -eEEEccccc-EEEe
Confidence 122788887 4443
No 497
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=25.00 E-value=5.5e+02 Score=24.05 Aligned_cols=18 Identities=22% Similarity=0.488 Sum_probs=11.5
Q ss_pred eEeeecCCCceEEEEeeC
Q 011049 139 LDLFDINTGSKERIWESN 156 (494)
Q Consensus 139 l~~~d~~~g~~~~l~~~~ 156 (494)
+.+|.+.+|+....+...
T Consensus 329 vkLWEi~t~R~l~~YtGA 346 (430)
T KOG0640|consen 329 VKLWEISTGRMLKEYTGA 346 (430)
T ss_pred eeeeeecCCceEEEEecC
Confidence 566777777766555544
No 498
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=24.84 E-value=5.7e+02 Score=23.78 Aligned_cols=74 Identities=11% Similarity=0.091 Sum_probs=35.9
Q ss_pred ccCCCCCCCCCccceeeeccCCCCCCCCCeecc--ccccccccceecCCCceEEEEee--eeccceEEEEEcCCCCCCCc
Q 011049 5 QDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLALVNETW--YKTSQTRTWLVCPGSKDVAP 80 (494)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lt--~~~~~~~~p~wspDg~~i~f~~~--~~~~~~~~~~~~~~~g~~~~ 80 (494)
+.-|..+.+.. ..|-++.+. .++++..... ..++...-..|.||.+-.+ -.- ..+..-+||++..+.+..++
T Consensus 62 la~gS~~Ee~~--Nkvqiv~ld-~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~-pdlLATs~D~LRlWri~~ee~~~~~ 137 (364)
T KOG0290|consen 62 LAVGSFIEEYN--NKVQIVQLD-EDSGELVEDANFDHPYPVTKLMWIPDSKGVY-PDLLATSSDFLRLWRIGDEESRVEL 137 (364)
T ss_pred EEEeeeccccC--CeeEEEEEc-cCCCceeccCCCCCCCCccceEecCCccccC-cchhhcccCeEEEEeccCcCCceeh
Confidence 34444444444 444444441 1555543332 3333334556999985322 110 11236789999876543333
Q ss_pred eE
Q 011049 81 RV 82 (494)
Q Consensus 81 ~~ 82 (494)
..
T Consensus 138 ~~ 139 (364)
T KOG0290|consen 138 QS 139 (364)
T ss_pred hh
Confidence 33
No 499
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=24.73 E-value=6.3e+02 Score=24.26 Aligned_cols=54 Identities=15% Similarity=0.084 Sum_probs=28.4
Q ss_pred ceEeeecCCCceEEEEeeCcchhhhheeeeccCCCcccccccCcEEEEEEecCCCCCeEEEEEcCCCcee
Q 011049 138 FLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 207 (494)
Q Consensus 138 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~s~~~~~~~s~d~~~~~~~~~s~~~p~~l~~~~~~~~~~~ 207 (494)
.|+.+|..+|+ .+|...... .....+....++.+++... -..++.++..+++..
T Consensus 290 ~l~~~d~~tG~--~~W~~~~~~----------~~~~ssp~i~g~~l~~~~~----~G~l~~~d~~tG~~~ 343 (377)
T TIGR03300 290 VVVALDRRSGS--ELWKNDELK----------YRQLTAPAVVGGYLVVGDF----EGYLHWLSREDGSFV 343 (377)
T ss_pred eEEEEECCCCc--EEEcccccc----------CCccccCEEECCEEEEEeC----CCEEEEEECCCCCEE
Confidence 38899998885 567642110 0000011123445554322 257888888777654
No 500
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=24.49 E-value=1.1e+02 Score=27.69 Aligned_cols=32 Identities=19% Similarity=0.126 Sum_probs=0.0
Q ss_pred HHHHHHHcCCCCCCcEEEEecChHHHHHHHHHH
Q 011049 331 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA 363 (494)
Q Consensus 331 ~v~~l~~~~~~d~~ri~i~G~S~GG~~a~~~~~ 363 (494)
+++.|.+++..-.-.. +.|-|+|+..+..++.
T Consensus 18 Vl~aL~e~g~~~~~d~-i~GtSAGAl~aa~~a~ 49 (245)
T cd07218 18 VAVCLKKYAPHLLLNK-ISGASAGALAACCLLC 49 (245)
T ss_pred HHHHHHHhCcccCCCe-EEEEcHHHHHHHHHHh
Done!