BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011053
(494 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2QKL5|PCS3_LOTJA Glutathione gamma-glutamylcysteinyltransferase 3 OS=Lotus japonicus
GN=PCS3 PE=2 SV=1
Length = 479
Score = 632 bits (1629), Expect = e-180, Method: Compositional matrix adjust.
Identities = 311/480 (64%), Positives = 380/480 (79%), Gaps = 11/480 (2%)
Query: 1 MAVAGVYRRVLPSPPAIEFASPQGKKLFIEALEGGTMEGFFKLISYYQTQSEPAYCGLAS 60
MA AG+YRRVLPSPPAI+FASP+GKK+F+EAL GTMEGFFKL+SYYQTQSEPAYCGLA+
Sbjct: 1 MASAGLYRRVLPSPPAIDFASPEGKKIFVEALGQGTMEGFFKLVSYYQTQSEPAYCGLAT 60
Query: 61 LAVVLNALAIDPGRTWKGPWRWFDDTMLDCCEPLSKIKDEGITFGKVSCLAFCNGANVEA 120
L VVLNAL+IDPGR WKGPWRWFDD+MLDCCEPL KIK +GITFGKV+CLA CNGA+VEA
Sbjct: 61 LTVVLNALSIDPGRKWKGPWRWFDDSMLDCCEPLEKIKVQGITFGKVACLARCNGAHVEA 120
Query: 121 FRTNESSIDEFRRHVISSASSEDSHVITSYHRGVFKQTGTGHFSPIGGYHAGKDMVLILD 180
FR+NES++ +FR VIS SSED H+I SYHR KQTG GHFSPIGGYHA +DMVLILD
Sbjct: 121 FRSNESTVSDFRDRVISCCSSEDRHLIVSYHRSGLKQTGEGHFSPIGGYHAERDMVLILD 180
Query: 181 VARFKYPPHWVPLTLLWEAMDTIDNATGHRRGFMTVSRIPKAPSILYTVSCRHEGWNKVA 240
V R+KYPPHWVPLTLLW+AM+TID ATG +RG+M +S++ +APSILYTVSCRHEGW+ VA
Sbjct: 181 VTRYKYPPHWVPLTLLWDAMNTIDRATGLQRGYMIISKLKRAPSILYTVSCRHEGWSSVA 240
Query: 241 KYLTEDVPLRLKSDDVKSVENLLSVIFKSAPADLKEFIKWVAEVRRQEDGSMILSEEEKG 300
K+LTE+VPL LKS+D+K ++ +LSV+FKS P++L+EFI W+AEVRRQEDG++ LSEEEKG
Sbjct: 241 KFLTENVPLLLKSEDLKDIQEVLSVVFKSPPSELREFITWIAEVRRQEDGNLTLSEEEKG 300
Query: 301 RLVMKEEVLKQTRETELFKYVAKWSASKISLCKGVTSWGLKETLPELAADICCQGAELFM 360
RL +K ++L+Q R T LFK+V W S+ S C+ + ++ LPELAA +CCQGA L
Sbjct: 301 RLAIKADILEQIRTTTLFKHVTSWLDSQRSRCRTIAKLQDRDMLPELAAGVCCQGACLLT 360
Query: 361 GKLSSSEGTCCRQTNVTLLKVDDEKAMTVVSGTVTT-DGIEKEIETLVPSSITELSNLCD 419
G G CC Q +V L VD + +T+VSGTV + E+ ++ LVP LC
Sbjct: 361 G-CCLPGGKCCSQIDVKHLNVDHKNIVTLVSGTVASGSSSEQGVDVLVP--------LCQ 411
Query: 420 FD-QSNCKGMHPSTADVLTVLLLALPQHTWSGIKEEELRMQFNHLASVDKLPSLLQQEVQ 478
+ +C GMHPSTADVLTVLLLALP HTWSGIKEE+L + L + + LP LLQ+EV+
Sbjct: 412 MGPEGHCIGMHPSTADVLTVLLLALPLHTWSGIKEEKLCAEVTSLLTTENLPPLLQEEVR 471
>sp|Q2TSC7|PCS1_LOTJA Glutathione gamma-glutamylcysteinyltransferase 1 OS=Lotus japonicus
GN=PCS1 PE=2 SV=1
Length = 501
Score = 617 bits (1591), Expect = e-176, Method: Compositional matrix adjust.
Identities = 288/488 (59%), Positives = 374/488 (76%), Gaps = 5/488 (1%)
Query: 1 MAVAGVYRRVLPSPPAIEFASPQGKKLFIEALEGGTMEGFFKLISYYQTQSEPAYCGLAS 60
MA+AG+YRR+LPSPPA++FAS QGK+LF+EA++ GTME F++L+SY+QTQSEPA+CGLAS
Sbjct: 1 MAMAGLYRRLLPSPPAVDFASSQGKQLFLEAVQNGTMESFYRLVSYFQTQSEPAFCGLAS 60
Query: 61 LAVVLNALAIDPGRTWKGPWRWFDDTMLDCCEPLSKIKDEGITFGKVSCLAFCNGANVEA 120
L++VLNALAIDPGR WKGPWRWFD++MLDCCEPL KIK GI+FGK+ CLA C GA VEA
Sbjct: 61 LSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLDKIKARGISFGKLVCLAHCAGAKVEA 120
Query: 121 FRTNESSIDEFRRHVISSASSEDSHVITSYHRGVFKQTGTGHFSPIGGYHAGKDMVLILD 180
F + SSID FR++V+ ++S+D HVI+SYHR KQTGTGHFSPIGGYHAGKDM LILD
Sbjct: 121 FHASHSSIDHFRKYVMKCSTSDDCHVISSYHREALKQTGTGHFSPIGGYHAGKDMALILD 180
Query: 181 VARFKYPPHWVPLTLLWEAMDTIDNATGHRRGFMTVSRIPKAPSILYTVSCRHEGWNKVA 240
VARFKYPPHW+PLT LWE M+ +D +TG RGFM +SR + P +LYT+SC+HE WN +A
Sbjct: 181 VARFKYPPHWIPLTHLWEGMNYVDESTGKTRGFMLISRPHREPGMLYTLSCKHESWNSIA 240
Query: 241 KYLTEDVPLRLKSDDVKSVENLLSVIFKSAPADLKEFIKWVAEVRRQEDGSMILSEEEKG 300
K+L +D+P L S+DVK + +LSVI S P++ +EFIKWVAE+RR EDGS LS EEK
Sbjct: 241 KFLIDDIPFLLTSEDVKDICKVLSVIVTSLPSNFEEFIKWVAEIRRGEDGSPSLSVEEKA 300
Query: 301 RLVMKEEVLKQTRETELFKYVAKWSASKISLCKGVT-SWGLKETLPELAADICCQGAELF 359
RL +KEE+LKQ + T LFK+VA + + C G T + G ++T P +AA +CCQGAE+
Sbjct: 301 RLSVKEEILKQVQRTGLFKHVASFLSHS---CSGHTPTSGDRDTFPVIAASVCCQGAEIL 357
Query: 360 MGKLSSSEGTCCRQTNVTLLKVDDEKAMTVVSGTVTTDGIEKEIETLVPSSITELSNLCD 419
GK+SSS CCR+T + K +D+K + +V GTV E+ ++ L+PSS +LS C
Sbjct: 358 GGKISSSAEYCCRETCMKCWKAEDDKPIRMVCGTVVNGNTEQGVDVLIPSSCGKLSCTCS 417
Query: 420 FDQSNCKGMHPSTADVLTVLLLALPQHTWSGIKEEELRMQFNHLASVDKLPSLLQQEVQH 479
+ + HP++ DVLTVLLL+LP TW+GI +E+L + + L S++ LP+LLQ+EV H
Sbjct: 418 STTKSIR-KHPASTDVLTVLLLSLPTSTWAGIADEKLLSEIHDLVSIENLPALLQEEVLH 476
Query: 480 LRRQLHFL 487
LRRQLH L
Sbjct: 477 LRRQLHIL 484
>sp|Q2TE74|PCS2_LOTJA Glutathione gamma-glutamylcysteinyltransferase 2 OS=Lotus japonicus
GN=PCS2 PE=2 SV=2
Length = 482
Score = 617 bits (1590), Expect = e-176, Method: Compositional matrix adjust.
Identities = 309/480 (64%), Positives = 374/480 (77%), Gaps = 12/480 (2%)
Query: 1 MAVAGVYRRVLPSPPAIEFASPQGKKLFIEALEGGTMEGFFKLISYYQTQSEPAYCGLAS 60
MA +YRRVLPSPPAI+FAS +GKK+F+EAL GTMEGFFKLIS+YQTQSEPAYCGLA+
Sbjct: 1 MASVSLYRRVLPSPPAIDFASQEGKKIFVEALGQGTMEGFFKLISFYQTQSEPAYCGLAT 60
Query: 61 LAVVLNALAIDPGRTWKGPWRWFDDTMLDCCEPLSKIKDEGITFGKVSCLAFCNGANVEA 120
L+VVLNALAIDPGR WKGPWRWFDD+MLDCCEPL K+K +GITFGKV+CLA CNGA VEA
Sbjct: 61 LSVVLNALAIDPGRKWKGPWRWFDDSMLDCCEPLEKVKVQGITFGKVACLARCNGAKVEA 120
Query: 121 FRTNESSIDEFRRHVISSASSEDSHVITSYHRGVFKQTGTGHFSPIGGYHAGKDMVLILD 180
FR+NES++ +FR VIS SSED H I SYHR KQTG GHFSP+GGYHA +DMVLILD
Sbjct: 121 FRSNESTVSDFRNRVISCCSSEDRHAIVSYHRSGLKQTGEGHFSPLGGYHAERDMVLILD 180
Query: 181 VARFKYPPHWVPLTLLWEAMDTIDNATGHRRGFMTVSRIPKAPSILYTVSCRHEGWNKVA 240
V R+KYPPHWVP+TLLW AM+TID ATG +RG+M +S++ +APSILYT+SCRHEGW+ VA
Sbjct: 181 VTRYKYPPHWVPVTLLWNAMNTIDRATGLQRGYMIISKLNRAPSILYTLSCRHEGWSSVA 240
Query: 241 KYLTEDVPLRLKSDDVKSVENLLSVIFKSAPADLKEFIKWVAEVRRQEDGSMILSEEEKG 300
K+LTE+VPL LKS+D+K ++ +LSV+FKS P++L+EFI W+AEVRRQEDG++ LSEEEKG
Sbjct: 241 KFLTENVPLLLKSEDLKDIQEVLSVVFKSPPSELREFITWIAEVRRQEDGNLTLSEEEKG 300
Query: 301 RLVMKEEVLKQTRETELFKYVAKWSASKISLCKGVTSWGLKETLPELAADICCQGAELFM 360
RLV+K E+L++ R LFK+V W S+ S C + + K+ LPELAA +CCQGA L
Sbjct: 301 RLVIKAEILEKIRTAGLFKHVTSWLDSQRSRCSTIANLQDKDMLPELAARVCCQGACLLT 360
Query: 361 GKLSSSEGTCCRQTNVTLLKVDDEK-AMTVVSGTVTT-DGIEKEIETLVPSSITELSNLC 418
G S G CC Q +V L VD + A T VSGT TT E+ ++ LVP LC
Sbjct: 361 G-CCLSGGKCCCQIDVKHLNVDSKNLATTFVSGTFTTGSSSEQGVDVLVP--------LC 411
Query: 419 DFD-QSNCKGMHPSTADVLTVLLLALPQHTWSGIKEEELRMQFNHLASVDKLPSLLQQEV 477
+ + MHPSTADVLTVLLLALP HTWSGIKEE+LR + L + + LPSLLQ+EV
Sbjct: 412 QRGPEGHYIAMHPSTADVLTVLLLALPLHTWSGIKEEKLRAEVTSLVTTEDLPSLLQEEV 471
>sp|Q9SWW5|PCS1_WHEAT Glutathione gamma-glutamylcysteinyltransferase 1 OS=Triticum
aestivum GN=PCS1 PE=2 SV=1
Length = 500
Score = 574 bits (1479), Expect = e-163, Method: Compositional matrix adjust.
Identities = 287/487 (58%), Positives = 365/487 (74%), Gaps = 2/487 (0%)
Query: 1 MAVAGVYRRVLPSPPAIEFASPQGKKLFIEALEGGTMEGFFKLISYYQTQSEPAYCGLAS 60
M VA +YRRVLPSPPA+EFAS +GK+LF EAL+GGTMEGFF LISY+QTQSEPA+CGLAS
Sbjct: 1 MEVASLYRRVLPSPPAVEFASAEGKRLFAEALQGGTMEGFFNLISYFQTQSEPAFCGLAS 60
Query: 61 LAVVLNALAIDPGRTWKGPWRWFDDTMLDCCEPLSKIKDEGITFGKVSCLAFCNGANVEA 120
L+VVLNALAIDPGR WKGPWRWFD++MLDCCEPL K+K EGITFGKV CLA C GA V++
Sbjct: 61 LSVVLNALAIDPGRPWKGPWRWFDESMLDCCEPLHKVKAEGITFGKVVCLAHCAGARVQS 120
Query: 121 FRTNESSIDEFRRHVISSASSEDSHVITSYHRGVFKQTGTGHFSPIGGYHAGKDMVLILD 180
FR ++++I +FR H+ ASS+D H+I+SYHR FKQTGTGHFSPIGGYHA KDM LILD
Sbjct: 121 FRADQTTIHDFRAHLTRCASSQDCHLISSYHRSPFKQTGTGHFSPIGGYHAEKDMALILD 180
Query: 181 VARFKYPPHWVPLTLLWEAMDTIDNATGHRRGFMTVSRIPKAPSILYTVSCRHEGWNKVA 240
VARFKYPPHWVPLTLLW+AM+T D ATG RGFM VSR APS+LYTVSC H W +A
Sbjct: 181 VARFKYPPHWVPLTLLWDAMNTTDEATGLLRGFMLVSRRSSAPSLLYTVSCGHGSWKSMA 240
Query: 241 KYLTEDVPLRLKSDDVKSVENLLSVIFKSAPADLKEFIKWVAEVRRQEDGSMILSEEEKG 300
KY EDVP LK + + +V LLS + +S PA+ + IK V EVRR+E+G LS+EEK
Sbjct: 241 KYCVEDVPNLLKDESLDNVTTLLSRLVESLPANAGDLIKCVIEVRRKEEGESSLSKEEKE 300
Query: 301 RLVMKEEVLKQTRETELFKYVAKWSASKISLCKGVTSWGLKETLPELAADICCQGAELFM 360
RL +KE+VL+Q R+T+LF+ V + K +S +++L E+AA +CCQGA
Sbjct: 301 RLFLKEKVLQQIRDTDLFRVVHELQYPKGLC-GSCSSSSDEDSLAEIAATVCCQGAAFLS 359
Query: 361 GKLSSSEGTCCRQTNVTLLKVDDEKAMTVVSGTVTTDGIEKEIETLVPSSITELSNLCDF 420
G L S +G CCR+T + ++ + + TV+SGTV + G E+ ++ L+P+S ++ S LC+
Sbjct: 360 GNLVSRDGFCCRETCIKCIEANGDGLKTVISGTVVSKGNEQAVDLLLPTSSSKTS-LCNS 418
Query: 421 DQSNCKGMHPSTADVLTVLLLALPQHTWSGIKEEELRMQFNHLASVDKLPSLLQQEVQHL 480
+ + +PS+ DVLTVLLL L +TW GIK+E ++ +F L S D LP LL+QE+ HL
Sbjct: 419 NLKSKIVKYPSSTDVLTVLLLVLQPNTWLGIKDENVKAEFQSLVSTDNLPDLLKQEILHL 478
Query: 481 RRQLHFL 487
RRQLH+L
Sbjct: 479 RRQLHYL 485
>sp|Q9S7Z3|PCS1_ARATH Glutathione gamma-glutamylcysteinyltransferase 1 OS=Arabidopsis
thaliana GN=PCS1 PE=1 SV=1
Length = 485
Score = 566 bits (1458), Expect = e-160, Method: Compositional matrix adjust.
Identities = 276/477 (57%), Positives = 358/477 (75%), Gaps = 19/477 (3%)
Query: 1 MAVAGVYRRVLPSPPAIEFASPQGKKLFIEALEGGTMEGFFKLISYYQTQSEPAYCGLAS 60
MA+A +YRR LPSPPAI+F+S +GK +F EAL+ GTMEGFF+LISY+QTQSEPAYCGLAS
Sbjct: 1 MAMASLYRRSLPSPPAIDFSSAEGKLIFNEALQKGTMEGFFRLISYFQTQSEPAYCGLAS 60
Query: 61 LAVVLNALAIDPGRTWKGPWRWFDDTMLDCCEPLSKIKDEGITFGKVSCLAFCNGANVEA 120
L+VVLNAL+IDPGR WKGPWRWFD++MLDCCEPL +K++GI+FGKV CLA C+GA VEA
Sbjct: 61 LSVVLNALSIDPGRKWKGPWRWFDESMLDCCEPLEVVKEKGISFGKVVCLAHCSGAKVEA 120
Query: 121 FRTNESSIDEFRRHVISSASSEDSHVITSYHRGVFKQTGTGHFSPIGGYHAGKDMVLILD 180
FRT++S+ID+FR+ V+ SSE+ H+I++YHRGVFKQTGTGHFSPIGGY+A +DM LILD
Sbjct: 121 FRTSQSTIDDFRKFVVKCTSSENCHMISTYHRGVFKQTGTGHFSPIGGYNAERDMALILD 180
Query: 181 VARFKYPPHWVPLTLLWEAMDTIDNATGHRRGFMTVSRIPKAPSILYTVSCRHEGWNKVA 240
VARFKYPPHWVPL LLWEAMD+ID +TG RRGFM +SR + P +LYT+SC+ E W ++A
Sbjct: 181 VARFKYPPHWVPLKLLWEAMDSIDQSTGKRRGFMLISRPHREPGLLYTLSCKDESWIEIA 240
Query: 241 KYLTEDVPLRLKSDDVKSVENLLSVIFKSAPADLKEFIKWVAEVRRQEDGSMILSEEEKG 300
KYL EDVP + S V SVE ++SV+FKS P++ +FI+WVAE+R ED + LS EEK
Sbjct: 241 KYLKEDVPRLVSSQHVDSVEKIISVVFKSLPSNFNQFIRWVAEIRITEDSNQNLSAEEKS 300
Query: 301 RLVMKEEVLKQTRETELFKYVAKWSASKISLCKGVTSWGLKETLPELAADICCQGAELFM 360
RL +K+ VLK+ ETELFK++ K+ +++ G +++L AA CCQGAE+
Sbjct: 301 RLKLKQLVLKEVHETELFKHINKF----------LSTVGYEDSLTYAAAKACCQGAEILS 350
Query: 361 GKLSSSEGTCCRQTNVTLLKVDDEKAMTVVSGTVTTDGIEKEIETLVPSSITELSNLCDF 420
G S S+ CCR+T V +K D+ TVV+G V DG E++++ LVPS+ TE
Sbjct: 351 G--SPSKEFCCRETCVKCIKGPDDSEGTVVTGVVVRDGNEQKVDLLVPSTQTEC------ 402
Query: 421 DQSNCKGMHPSTADVLTVLLLALPQHTWSGIKEEELRMQFNHLASVDKLPSLLQQEV 477
+ + +P+ DV T LLLALP TWSGIK++ L + L S+ LP+LLQ+EV
Sbjct: 403 -ECGPEATYPAGNDVFTALLLALPPQTWSGIKDQALMHEMKQLISMASLPTLLQEEV 458
>sp|Q9ZWB7|PCS2_ARATH Glutathione gamma-glutamylcysteinyltransferase 2 OS=Arabidopsis
thaliana GN=PCS2 PE=2 SV=1
Length = 452
Score = 531 bits (1368), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/487 (53%), Positives = 343/487 (70%), Gaps = 51/487 (10%)
Query: 1 MAVAGVYRRVLPSPPAIEFASPQGKKLFIEALEGGTMEGFFKLISYYQTQSEPAYCGLAS 60
M++A +YRR L SPPAI+FAS +GK++F EAL+ GTMEGFF LISY+QTQSEPA+CGLAS
Sbjct: 1 MSMASLYRRSL-SPPAIDFASFEGKQIFNEALQKGTMEGFFGLISYFQTQSEPAFCGLAS 59
Query: 61 LAVVLNALAIDPGRTWKGPWRWFDDTMLDCCEPLSKIKDEGITFGKVSCLAFCNGANVEA 120
L++VLN+L+IDPGR WKGPWRWFD++ML+CCEPL +KD+GI+FGKV CLA +GA VEA
Sbjct: 60 LSMVLNSLSIDPGRKWKGPWRWFDESMLECCEPLEIVKDKGISFGKVVCLAHSSGAKVEA 119
Query: 121 FRTNESSIDEFRRHVISSASSEDSHVITSYHRGVFKQTGTGHFSPIGGYHAGKDMVLILD 180
FRTN+S+ID+FR++V+ ++S++ H+I++YHR V KQTGTGHFSPIGGY+A +DM LILD
Sbjct: 120 FRTNQSTIDDFRKYVVKCSTSDNCHMISTYHRQVLKQTGTGHFSPIGGYNAERDMALILD 179
Query: 181 VARFKYPPHWVPLTLLWEAMDTIDNATGHRRGFMTVSRIPKAPSILYTVSCRHEGWNKVA 240
VARFKYPPHWVPL LLW+AMD+ID +TG RRGFM +SR + P +LYT+SC+ E W +A
Sbjct: 180 VARFKYPPHWVPLKLLWDAMDSIDQSTGRRRGFMLISRPHREPGLLYTLSCKDESWISIA 239
Query: 241 KYLTEDVPLRLKSDDVKSVENLLSVIFKSAPADLKEFIKWVAEVRRQEDGSMILSEEEKG 300
KYL EDVP + S V ++E +L V+FKS PA+ +FIKW+AE+RR ED + LS EEK
Sbjct: 240 KYLKEDVPRLVSSQHVDTIERILYVVFKSLPANFNQFIKWMAEIRRTEDVNQNLSSEEKS 299
Query: 301 RLVMKEEVLKQTRETELFKYVAKWSASKISLCKGVTSWGLKETLPELAADICCQGAELFM 360
RL +K+E+LKQ +ET+LFK+V K+ +S ++ LP +AA + C G E+
Sbjct: 300 RLKLKQELLKQVQETKLFKHVDKFLSSV-----------YEDNLPYVAAKVYCDGDEILS 348
Query: 361 GKLSSSEGTCCRQTNVTLLKVDDEKAMTVVSGTVTTDGIEKEIETLVPSSITELSNLCDF 420
G S+ +CC++T V +K E+ +TVV+
Sbjct: 349 G--YESDESCCKETCVKCIKGLGEEKVTVVA----------------------------- 377
Query: 421 DQSNCKGMHPSTADVLTVLLLALPQHTWSGIKEEELRMQFNHLASVDKLPSLLQQEVQHL 480
+PS DV T LLLALP TWSGIK++ L + L S+ P+LLQQEV HL
Sbjct: 378 --------YPSGNDVFTALLLALPPQTWSGIKDQSLLQEMKQLISMVSHPTLLQQEVLHL 429
Query: 481 RRQLHFL 487
RRQL L
Sbjct: 430 RRQLEML 436
>sp|Q10075|PCS_SCHPO Glutathione gamma-glutamylcysteinyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC3H1.10 PE=2 SV=1
Length = 414
Score = 231 bits (589), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 161/265 (60%), Gaps = 4/265 (1%)
Query: 7 YRRVLPSPPAIEFASPQGKKLFIEALEGGTMEGFFKLISYYQTQSEPAYCGLASLAVVLN 66
Y+R LP + F S GK +F+ AL+ G ME +F L TQ+EPA+CGL +L ++LN
Sbjct: 43 YKRQLPKQ-CLAFDSSLGKDVFLRALQEGRMENYFSLAQQMVTQNEPAFCGLGTLCMILN 101
Query: 67 ALAIDPGRTWKGPWRWFDDTMLDCCEPLSKIKDEGITFGKVSCLAFCNGANVEAFRTNES 126
+L +DPGR WKG WRW+D MLDCC LS I+ +G+T + SCLA CNG +
Sbjct: 102 SLKVDPGRLWKGSWRWYDQYMLDCCRSLSDIEKDGVTLEEFSCLANCNGLRTITKCVKDV 161
Query: 127 SIDEFRRHVISSASSEDSHVITSYHRGVFKQTGTGHFSPIGGYHAGKDMVLILDVARFKY 186
S DEFR+ VIS ++ E+ + S+ R V QTG GHFSP+GG+ + +LILDVARFKY
Sbjct: 162 SFDEFRKDVISCSTIENKIMAISFCRKVLGQTGDGHFSPVGGFSESDNKILILDVARFKY 221
Query: 187 PPHWVPLTLLWEAMDTIDNATGHRRGFMTVSRIPKAPSILYTVSCRHEGWNKVAKYLTED 246
P +WV L L++E+M ID A+G RG++ + + P + TV W V+K++ +
Sbjct: 222 PCYWVDLKLMYESMFPIDKASGQPRGYVLLEPM-HIPLGVLTVGLNKYSWRNVSKHILQQ 280
Query: 247 VPLRLKSDDVKSVENLLSVIFKSAP 271
+D++ + LLS+ S P
Sbjct: 281 AATVKNADNLAEI--LLSINQSSIP 303
>sp|P0C6Y3|R1AB_IBVM Replicase polyprotein 1ab OS=Avian infectious bronchitis virus
(strain M41) GN=rep PE=1 SV=1
Length = 6631
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 189 HWVPLTLLWEAMDTIDNATGHRRGF--MTVSRIPKAPSILY---TVSCRHEGWNKVAKYL 243
++ P++ L A++ + A G F TV IP P +++ ++ C E WN + K
Sbjct: 656 YYTPMSQL-GAINVVCKAGGKTVTFGETTVQEIP-PPDVVFIKVSIECCGEPWNTIFKKA 713
Query: 244 TEDVPLRLKSDDVKSVENLLSVIFKSAPADLK 275
++ P+ +++D +VE LLSV+++ DLK
Sbjct: 714 YKE-PIEVETD--LTVEQLLSVVYEKMCDDLK 742
>sp|P0C6V5|R1A_IBVM Replicase polyprotein 1a OS=Avian infectious bronchitis virus
(strain M41) GN=1a PE=1 SV=1
Length = 3953
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 189 HWVPLTLLWEAMDTIDNATGHRRGF--MTVSRIPKAPSILYTVS--CRHEGWNKVAKYLT 244
++ P++ L A++ + A G F TV IP + VS C E WN + K
Sbjct: 656 YYTPMSQL-GAINVVCKAGGKTVTFGETTVQEIPPPDVVFIKVSIECCGEPWNTIFKKAY 714
Query: 245 EDVPLRLKSDDVKSVENLLSVIFKSAPADLK 275
++ P+ +++D +VE LLSV+++ DLK
Sbjct: 715 KE-PIEVETD--LTVEQLLSVVYEKMCDDLK 742
>sp|P0C6V4|R1A_IBVBC Replicase polyprotein 1a OS=Avian infectious bronchitis virus
(strain Beaudette CK) GN=1a PE=3 SV=1
Length = 3951
Score = 32.3 bits (72), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 189 HWVPLTLLWEAMDTIDNATGHRRGF--MTVSRIP--KAPSILYTVSCRHEGWNKVAKYLT 244
++ P++ L A++ + A G F TV IP I ++ C E WN + K
Sbjct: 656 YYTPMSQL-GAINVVCKAGGKTVTFGETTVQEIPPPDVVPIKVSIECCGEPWNTIFKKAY 714
Query: 245 EDVPLRLKSDDVKSVENLLSVIFKSAPADLK 275
++ P+ + +D +VE LLSVI++ DLK
Sbjct: 715 KE-PIEVDTD--LTVEQLLSVIYEKMCDDLK 742
>sp|P0C6V3|R1A_IBVB Replicase polyprotein 1a OS=Avian infectious bronchitis virus
(strain Beaudette) GN=1a PE=1 SV=1
Length = 3951
Score = 32.3 bits (72), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 189 HWVPLTLLWEAMDTIDNATGHRRGF--MTVSRIP--KAPSILYTVSCRHEGWNKVAKYLT 244
++ P++ L A++ + A G F TV IP I ++ C E WN + K
Sbjct: 656 YYTPMSQL-GAINVVCKAGGKTVTFGETTVQEIPPPDVVPIKVSIECCGEPWNTIFKKAY 714
Query: 245 EDVPLRLKSDDVKSVENLLSVIFKSAPADLK 275
++ P+ + +D +VE LLSVI++ DLK
Sbjct: 715 KE-PIEVDTD--LTVEQLLSVIYEKMCDDLK 742
>sp|P0C6Y2|R1AB_IBVBC Replicase polyprotein 1ab OS=Avian infectious bronchitis virus
(strain Beaudette CK) GN=rep PE=3 SV=1
Length = 6629
Score = 32.3 bits (72), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 189 HWVPLTLLWEAMDTIDNATGHRRGF--MTVSRIP--KAPSILYTVSCRHEGWNKVAKYLT 244
++ P++ L A++ + A G F TV IP I ++ C E WN + K
Sbjct: 656 YYTPMSQL-GAINVVCKAGGKTVTFGETTVQEIPPPDVVPIKVSIECCGEPWNTIFKKAY 714
Query: 245 EDVPLRLKSDDVKSVENLLSVIFKSAPADLK 275
++ P+ + +D +VE LLSVI++ DLK
Sbjct: 715 KE-PIEVDTD--LTVEQLLSVIYEKMCDDLK 742
>sp|P0C6Y1|R1AB_IBVB Replicase polyprotein 1ab OS=Avian infectious bronchitis virus
(strain Beaudette) GN=rep PE=1 SV=1
Length = 6629
Score = 32.3 bits (72), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 189 HWVPLTLLWEAMDTIDNATGHRRGF--MTVSRIP--KAPSILYTVSCRHEGWNKVAKYLT 244
++ P++ L A++ + A G F TV IP I ++ C E WN + K
Sbjct: 656 YYTPMSQL-GAINVVCKAGGKTVTFGETTVQEIPPPDVVPIKVSIECCGEPWNTIFKKAY 714
Query: 245 EDVPLRLKSDDVKSVENLLSVIFKSAPADLK 275
++ P+ + +D +VE LLSVI++ DLK
Sbjct: 715 KE-PIEVDTD--LTVEQLLSVIYEKMCDDLK 742
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,559,092
Number of Sequences: 539616
Number of extensions: 7436204
Number of successful extensions: 20005
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 19982
Number of HSP's gapped (non-prelim): 19
length of query: 494
length of database: 191,569,459
effective HSP length: 122
effective length of query: 372
effective length of database: 125,736,307
effective search space: 46773906204
effective search space used: 46773906204
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)