Query 011057
Match_columns 494
No_of_seqs 302 out of 2822
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 07:38:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011057.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011057hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01788 Glu-decarb-GAD gluta 100.0 1.1E-57 2.4E-62 458.3 46.2 427 17-444 2-430 (431)
2 PLN02590 probable tyrosine dec 100.0 1E-53 2.2E-58 436.6 42.1 416 13-446 85-535 (539)
3 COG0076 GadB Glutamate decarbo 100.0 2.9E-52 6.2E-57 419.5 39.6 366 31-408 32-406 (460)
4 KOG1383 Glutamate decarboxylas 100.0 2E-51 4.3E-56 391.5 33.4 421 11-455 35-458 (491)
5 PLN02880 tyrosine decarboxylas 100.0 5.9E-51 1.3E-55 417.1 38.7 414 13-445 37-486 (490)
6 PF00282 Pyridoxal_deC: Pyrido 100.0 7.1E-50 1.5E-54 396.3 31.4 348 20-381 1-373 (373)
7 TIGR03799 NOD_PanD_pyr putativ 100.0 9.2E-47 2E-51 386.5 37.3 404 22-446 52-521 (522)
8 PLN02263 serine decarboxylase 100.0 4.3E-45 9.4E-50 363.7 39.5 356 39-444 75-444 (470)
9 PRK02769 histidine decarboxyla 100.0 3.2E-43 7E-48 349.2 38.8 327 70-444 37-373 (380)
10 KOG0628 Aromatic-L-amino-acid/ 100.0 4.3E-44 9.4E-49 340.2 29.9 413 14-450 29-471 (511)
11 PLN03032 serine decarboxylase; 100.0 3.5E-43 7.6E-48 346.0 37.6 325 70-440 37-373 (374)
12 TIGR03811 tyr_de_CO2_Ent tyros 100.0 4.8E-41 1E-45 346.5 35.4 355 31-398 54-522 (608)
13 TIGR00461 gcvP glycine dehydro 100.0 4E-40 8.6E-45 349.7 40.4 424 38-494 467-937 (939)
14 PRK05367 glycine dehydrogenase 100.0 9.9E-39 2.1E-43 345.5 38.5 425 36-494 477-945 (954)
15 PRK13520 L-tyrosine decarboxyl 100.0 2.6E-38 5.5E-43 318.2 39.0 369 37-442 2-370 (371)
16 cd06450 DOPA_deC_like DOPA dec 100.0 2.2E-38 4.8E-43 315.5 30.6 330 61-439 3-344 (345)
17 COG0520 csdA Selenocysteine ly 100.0 3.6E-37 7.9E-42 307.0 37.6 346 65-442 31-404 (405)
18 COG1104 NifS Cysteine sulfinat 100.0 6.8E-37 1.5E-41 293.3 36.8 347 65-448 10-382 (386)
19 PRK12566 glycine dehydrogenase 100.0 1.1E-37 2.3E-42 328.8 34.2 425 35-494 477-945 (954)
20 PLN02414 glycine dehydrogenase 100.0 6.1E-37 1.3E-41 329.7 40.0 420 36-494 503-977 (993)
21 TIGR03812 tyr_de_CO2_Arch tyro 100.0 1.3E-35 2.9E-40 298.7 40.2 365 39-439 2-372 (373)
22 KOG0629 Glutamate decarboxylas 100.0 7.8E-37 1.7E-41 287.6 23.7 410 14-449 58-508 (510)
23 PRK10874 cysteine sulfinate de 100.0 3.1E-32 6.8E-37 276.6 39.9 345 65-444 28-399 (401)
24 TIGR03392 FeS_syn_CsdA cystein 100.0 3.7E-32 8E-37 275.8 38.4 342 65-444 25-396 (398)
25 TIGR03402 FeS_nifS cysteine de 100.0 8.4E-32 1.8E-36 271.4 38.8 342 65-446 8-375 (379)
26 PRK04366 glycine dehydrogenase 100.0 1E-31 2.3E-36 276.5 39.2 388 30-450 44-455 (481)
27 PRK09295 bifunctional cysteine 100.0 1.1E-31 2.3E-36 272.9 38.3 341 65-442 32-403 (406)
28 PLN02651 cysteine desulfurase 100.0 1.6E-31 3.5E-36 267.6 36.3 328 65-431 8-364 (364)
29 TIGR03403 nifS_epsilon cystein 100.0 1.8E-30 3.9E-35 262.0 40.8 345 65-447 8-379 (382)
30 TIGR01977 am_tr_V_EF2568 cyste 100.0 5.6E-31 1.2E-35 265.4 36.9 338 67-439 11-375 (376)
31 TIGR01979 sufS cysteine desulf 100.0 2.3E-30 4.9E-35 263.3 38.2 346 66-444 28-402 (403)
32 PLN02855 Bifunctional selenocy 100.0 1.9E-30 4.1E-35 265.2 37.6 349 65-446 41-421 (424)
33 cd06453 SufS_like Cysteine des 100.0 1.5E-30 3.4E-35 261.8 35.8 337 67-437 10-373 (373)
34 TIGR01976 am_tr_V_VC1184 cyste 100.0 1E-30 2.2E-35 265.3 34.2 338 65-437 26-397 (397)
35 PRK02948 cysteine desulfurase; 100.0 3.9E-30 8.4E-35 259.5 38.0 341 65-445 9-376 (381)
36 TIGR02006 IscS cysteine desulf 100.0 4.2E-30 9.1E-35 260.7 37.8 343 65-446 12-380 (402)
37 PF00266 Aminotran_5: Aminotra 100.0 3.6E-30 7.9E-35 258.7 35.1 335 65-433 8-371 (371)
38 COG1003 GcvP Glycine cleavage 100.0 2E-29 4.4E-34 239.0 31.9 399 35-467 43-469 (496)
39 PRK00451 glycine dehydrogenase 100.0 5E-29 1.1E-33 256.4 36.2 376 21-441 33-446 (447)
40 cd06451 AGAT_like Alanine-glyo 100.0 1.4E-29 3.1E-34 253.2 31.1 330 68-441 10-355 (356)
41 PLN02409 serine--glyoxylate am 100.0 1.5E-29 3.3E-34 255.9 30.6 334 69-445 21-374 (401)
42 TIGR02326 transamin_PhnW 2-ami 100.0 6.3E-29 1.4E-33 249.0 33.4 317 91-442 31-361 (363)
43 TIGR01814 kynureninase kynuren 100.0 8.2E-29 1.8E-33 251.5 34.5 330 67-441 38-405 (406)
44 KOG2040 Glycine dehydrogenase 100.0 5.1E-30 1.1E-34 251.8 23.6 373 88-494 575-988 (1001)
45 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 1.2E-28 2.7E-33 248.4 34.6 332 67-444 31-382 (387)
46 KOG1549 Cysteine desulfurase N 100.0 4.9E-29 1.1E-33 239.9 29.4 355 61-447 48-422 (428)
47 PRK14012 cysteine desulfurase; 100.0 5.8E-28 1.3E-32 245.3 36.2 340 66-447 13-383 (404)
48 TIGR03235 DNA_S_dndA cysteine 100.0 5.6E-28 1.2E-32 241.2 35.5 303 66-404 8-320 (353)
49 cd00613 GDC-P Glycine cleavage 100.0 9.9E-28 2.1E-32 243.6 33.2 358 41-437 3-398 (398)
50 PRK13479 2-aminoethylphosphona 100.0 1.8E-27 4E-32 239.0 32.5 318 91-444 33-364 (368)
51 COG0075 Serine-pyruvate aminot 100.0 2.8E-27 6.1E-32 229.1 30.3 336 69-446 17-366 (383)
52 COG0156 BioF 7-keto-8-aminopel 100.0 1.1E-27 2.4E-32 234.3 26.9 323 68-440 54-387 (388)
53 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 9E-27 2E-31 233.1 33.7 329 67-441 12-360 (361)
54 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 4.3E-27 9.3E-32 235.2 30.9 330 69-440 11-354 (355)
55 COG0436 Aspartate/tyrosine/aro 100.0 1.2E-26 2.7E-31 231.9 33.3 346 56-442 29-390 (393)
56 PRK07179 hypothetical protein; 100.0 4.6E-27 9.9E-32 238.9 30.5 327 67-444 68-399 (407)
57 TIGR01822 2am3keto_CoA 2-amino 100.0 4.9E-27 1.1E-31 238.0 30.4 343 53-444 36-390 (393)
58 TIGR03531 selenium_SpcS O-phos 100.0 9.1E-27 2E-31 233.2 29.5 379 25-440 23-443 (444)
59 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 2.1E-26 4.6E-31 230.9 32.3 301 96-443 52-368 (370)
60 PRK03080 phosphoserine aminotr 100.0 3.1E-26 6.6E-31 229.8 28.8 332 67-446 22-376 (378)
61 PLN02724 Molybdenum cofactor s 100.0 7.2E-26 1.6E-30 246.3 33.9 345 70-442 49-487 (805)
62 PLN02955 8-amino-7-oxononanoat 99.9 1.8E-25 3.8E-30 223.7 27.9 342 58-445 105-463 (476)
63 PLN02721 threonine aldolase 99.9 2.3E-25 5E-30 222.5 28.5 328 59-443 9-352 (353)
64 PTZ00094 serine hydroxymethylt 99.9 6.2E-25 1.3E-29 225.3 31.2 341 67-447 45-412 (452)
65 TIGR01821 5aminolev_synth 5-am 99.9 4.9E-25 1.1E-29 223.8 29.3 329 67-444 59-397 (402)
66 cd06454 KBL_like KBL_like; thi 99.9 9.6E-25 2.1E-29 217.7 30.5 325 67-440 15-348 (349)
67 PRK06108 aspartate aminotransf 99.9 2.7E-24 5.9E-29 217.2 30.8 341 58-441 27-380 (382)
68 PRK05937 8-amino-7-oxononanoat 99.9 2.6E-24 5.6E-29 215.8 29.9 295 92-446 53-353 (370)
69 PRK13580 serine hydroxymethylt 99.9 4.8E-24 1E-28 213.6 31.0 371 40-445 35-447 (493)
70 PRK13393 5-aminolevulinate syn 99.9 6.9E-24 1.5E-28 215.5 31.0 329 67-444 59-397 (406)
71 PRK09064 5-aminolevulinate syn 99.9 6.7E-24 1.4E-28 215.9 30.4 330 65-444 58-398 (407)
72 PRK13392 5-aminolevulinate syn 99.9 7.7E-24 1.7E-28 215.5 30.5 332 65-444 58-398 (410)
73 PRK06939 2-amino-3-ketobutyrat 99.9 9.7E-24 2.1E-28 214.3 31.0 342 53-444 40-394 (397)
74 PLN00175 aminotransferase fami 99.9 2.6E-23 5.6E-28 211.2 32.7 344 55-441 54-411 (413)
75 PRK05958 8-amino-7-oxononanoat 99.9 1E-23 2.2E-28 213.3 29.6 337 53-440 37-384 (385)
76 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.2E-23 2.6E-28 210.0 29.7 320 75-438 4-352 (352)
77 cd00378 SHMT Serine-glycine hy 99.9 1.6E-23 3.5E-28 212.9 30.8 360 40-445 5-387 (402)
78 PRK08361 aspartate aminotransf 99.9 1.6E-23 3.5E-28 211.9 30.6 341 57-441 35-388 (391)
79 cd00609 AAT_like Aspartate ami 99.9 2.6E-23 5.7E-28 207.1 31.6 330 69-438 13-349 (350)
80 PLN02483 serine palmitoyltrans 99.9 1.3E-23 2.9E-28 216.5 30.2 341 58-445 103-468 (489)
81 cd00611 PSAT_like Phosphoserin 99.9 2.4E-24 5.1E-29 214.5 23.8 330 67-440 9-353 (355)
82 PLN00145 tyrosine/nicotianamin 99.9 7.6E-23 1.6E-27 208.6 35.1 350 54-443 51-424 (430)
83 PRK05764 aspartate aminotransf 99.9 7E-23 1.5E-27 207.6 34.3 344 56-443 32-391 (393)
84 PRK06225 aspartate aminotransf 99.9 3.1E-23 6.7E-28 209.1 31.3 341 56-446 29-379 (380)
85 PRK07682 hypothetical protein; 99.9 3E-23 6.5E-28 209.1 30.3 345 58-443 23-376 (378)
86 PRK06207 aspartate aminotransf 99.9 9.9E-23 2.2E-27 206.6 34.3 344 58-443 42-402 (405)
87 TIGR01825 gly_Cac_T_rel pyrido 99.9 2.6E-23 5.6E-28 210.2 29.9 341 52-444 30-382 (385)
88 TIGR00858 bioF 8-amino-7-oxono 99.9 2.1E-23 4.6E-28 208.9 29.0 335 52-437 13-359 (360)
89 PRK08056 threonine-phosphate d 99.9 5.5E-23 1.2E-27 205.2 31.6 327 55-441 20-353 (356)
90 PRK05957 aspartate aminotransf 99.9 7.9E-23 1.7E-27 206.5 33.1 344 57-443 29-385 (389)
91 PRK08363 alanine aminotransfer 99.9 1E-22 2.2E-27 206.5 34.0 351 52-442 27-393 (398)
92 cd06502 TA_like Low-specificit 99.9 4.2E-24 9E-29 212.2 23.4 320 61-439 3-337 (338)
93 TIGR01437 selA_rel uncharacter 99.9 4.9E-23 1.1E-27 205.2 30.8 316 67-440 24-362 (363)
94 PRK00011 glyA serine hydroxyme 99.9 3.4E-23 7.3E-28 211.4 30.3 341 58-443 28-389 (416)
95 PRK13034 serine hydroxymethylt 99.9 6.7E-23 1.4E-27 207.7 31.6 359 40-444 14-393 (416)
96 PRK08960 hypothetical protein; 99.9 1.2E-22 2.6E-27 205.3 33.1 341 55-441 32-382 (387)
97 PLN00143 tyrosine/nicotianamin 99.9 2.1E-22 4.5E-27 204.5 34.8 368 39-443 15-404 (409)
98 PRK05355 3-phosphoserine/phosp 99.9 1.4E-23 3.1E-28 208.4 25.4 330 67-442 13-357 (360)
99 COG0079 HisC Histidinol-phosph 99.9 8.4E-23 1.8E-27 200.8 30.3 315 68-443 36-354 (356)
100 TIGR01141 hisC histidinol-phos 99.9 3.6E-23 7.9E-28 206.1 27.9 321 58-437 22-345 (346)
101 PRK06290 aspartate aminotransf 99.9 8.6E-23 1.9E-27 206.9 30.6 347 54-445 43-407 (410)
102 TIGR01364 serC_1 phosphoserine 99.9 3.1E-23 6.7E-28 205.0 26.4 324 69-442 4-347 (349)
103 PRK14807 histidinol-phosphate 99.9 1.8E-22 3.9E-27 201.1 32.1 320 60-441 27-350 (351)
104 TIGR01366 serC_3 phosphoserine 99.9 1.1E-23 2.5E-28 209.5 23.3 329 68-444 14-361 (361)
105 PRK09082 methionine aminotrans 99.9 7.1E-23 1.5E-27 206.7 29.1 336 57-434 32-380 (386)
106 PRK08912 hypothetical protein; 99.9 2.3E-22 4.9E-27 203.3 32.7 341 58-439 29-382 (387)
107 PLN02822 serine palmitoyltrans 99.9 8E-23 1.7E-27 210.3 29.3 354 52-445 106-479 (481)
108 PLN02656 tyrosine transaminase 99.9 4.7E-22 1E-26 202.1 34.3 347 53-441 29-401 (409)
109 PRK07681 aspartate aminotransf 99.9 5.4E-22 1.2E-26 201.2 34.7 341 54-439 31-384 (399)
110 PRK13355 bifunctional HTH-doma 99.9 4E-22 8.8E-27 208.1 34.3 351 53-442 144-513 (517)
111 PRK05387 histidinol-phosphate 99.9 2E-22 4.4E-27 201.3 30.5 323 58-442 27-352 (353)
112 PTZ00433 tyrosine aminotransfe 99.9 6.6E-22 1.4E-26 201.3 34.6 353 53-445 31-410 (412)
113 PLN03226 serine hydroxymethylt 99.9 3.5E-22 7.5E-27 204.1 32.1 348 68-446 46-422 (475)
114 TIGR03537 DapC succinyldiamino 99.9 5.3E-22 1.2E-26 197.8 32.6 322 69-435 15-345 (350)
115 PRK07324 transaminase; Validat 99.9 4.3E-22 9.2E-27 199.9 32.0 335 53-441 24-368 (373)
116 PRK07683 aminotransferase A; V 99.9 7.4E-22 1.6E-26 199.3 33.5 341 58-441 31-381 (387)
117 PRK04870 histidinol-phosphate 99.9 1.5E-22 3.3E-27 202.2 28.0 322 58-440 29-355 (356)
118 PRK12414 putative aminotransfe 99.9 3.1E-22 6.7E-27 201.8 30.4 327 57-423 31-369 (384)
119 PRK07337 aminotransferase; Val 99.9 8.2E-22 1.8E-26 199.3 33.4 333 56-431 31-377 (388)
120 PLN02187 rooty/superroot1 99.9 2.1E-21 4.5E-26 199.3 36.6 351 55-445 66-440 (462)
121 KOG1359 Glycine C-acetyltransf 99.9 6.8E-23 1.5E-27 184.8 22.0 327 67-446 81-415 (417)
122 PLN03026 histidinol-phosphate 99.9 9.5E-22 2E-26 197.8 32.8 323 56-440 53-379 (380)
123 PRK05942 aspartate aminotransf 99.9 8.7E-22 1.9E-26 199.4 32.4 341 54-440 34-386 (394)
124 PRK07309 aromatic amino acid a 99.9 1.2E-21 2.7E-26 198.0 33.3 345 56-444 31-389 (391)
125 TIGR01265 tyr_nico_aTase tyros 99.9 3.7E-21 8E-26 195.3 36.5 346 54-440 30-398 (403)
126 PRK00950 histidinol-phosphate 99.9 3.5E-22 7.7E-27 200.1 28.7 321 56-441 35-360 (361)
127 PTZ00377 alanine aminotransfer 99.9 1.2E-21 2.7E-26 202.8 33.0 336 70-444 91-476 (481)
128 PRK02731 histidinol-phosphate 99.9 6.3E-22 1.4E-26 198.7 29.8 331 54-442 31-365 (367)
129 PRK01533 histidinol-phosphate 99.9 3.3E-22 7.1E-27 199.8 27.3 327 55-446 29-358 (366)
130 PRK06358 threonine-phosphate d 99.9 1.4E-21 3.1E-26 194.8 31.3 312 68-441 33-353 (354)
131 PRK03158 histidinol-phosphate 99.9 4.8E-22 1E-26 199.0 27.5 314 68-440 43-358 (359)
132 PRK01688 histidinol-phosphate 99.9 1.7E-22 3.6E-27 201.2 23.6 286 98-437 60-350 (351)
133 KOG1360 5-aminolevulinate synt 99.9 5E-22 1.1E-26 186.2 24.5 332 68-446 186-527 (570)
134 TIGR01264 tyr_amTase_E tyrosin 99.9 3.8E-21 8.2E-26 195.2 33.4 346 56-442 32-398 (401)
135 PLN03227 serine palmitoyltrans 99.9 1.5E-21 3.3E-26 196.5 30.0 332 68-445 13-384 (392)
136 PRK07777 aminotransferase; Val 99.9 3.3E-21 7.1E-26 194.8 32.5 342 57-438 26-381 (387)
137 TIGR03540 DapC_direct LL-diami 99.9 6.1E-21 1.3E-25 192.6 34.5 328 54-422 28-367 (383)
138 PRK09147 succinyldiaminopimela 99.9 5.6E-21 1.2E-25 193.7 34.1 345 54-440 28-393 (396)
139 PRK09276 LL-diaminopimelate am 99.9 5.3E-21 1.1E-25 193.3 33.4 328 54-422 30-369 (385)
140 KOG0259 Tyrosine aminotransfer 99.9 6.8E-21 1.5E-25 178.2 31.2 338 69-443 80-433 (447)
141 PRK09265 aminotransferase AlaT 99.9 5.3E-21 1.2E-25 194.3 33.5 351 53-443 31-401 (404)
142 PRK11658 UDP-4-amino-4-deoxy-L 99.9 2.2E-21 4.8E-26 194.8 30.3 329 70-441 14-377 (379)
143 PRK08068 transaminase; Reviewe 99.9 5E-21 1.1E-25 193.6 33.1 323 56-422 33-370 (389)
144 PRK07550 hypothetical protein; 99.9 9.7E-21 2.1E-25 191.3 34.6 344 54-438 28-382 (386)
145 PRK07366 succinyldiaminopimela 99.9 5.8E-21 1.2E-25 193.1 32.6 344 53-439 28-386 (388)
146 KOG2862 Alanine-glyoxylate ami 99.9 1.1E-20 2.4E-25 172.1 30.2 334 72-443 28-382 (385)
147 PRK02610 histidinol-phosphate 99.9 6.8E-21 1.5E-25 191.4 31.6 321 67-444 41-372 (374)
148 PRK06836 aspartate aminotransf 99.9 1.4E-20 3E-25 190.5 34.0 347 58-443 36-391 (394)
149 PRK06348 aspartate aminotransf 99.9 9E-21 2E-25 191.3 32.4 333 58-434 32-376 (384)
150 TIGR03538 DapC_gpp succinyldia 99.9 9.2E-21 2E-25 191.9 32.4 344 53-438 26-390 (393)
151 PLN02414 glycine dehydrogenase 99.9 5.6E-21 1.2E-25 206.7 32.5 351 31-439 77-465 (993)
152 COG0399 WecE Predicted pyridox 99.9 1.3E-20 2.9E-25 183.1 31.7 330 70-442 15-372 (374)
153 PRK09105 putative aminotransfe 99.9 4.6E-21 1E-25 192.0 29.5 310 67-441 56-368 (370)
154 TIGR03588 PseC UDP-4-keto-6-de 99.9 9.4E-21 2E-25 190.9 31.7 330 70-441 10-380 (380)
155 PRK15481 transcriptional regul 99.9 3.7E-21 8E-26 197.1 29.0 322 70-442 101-430 (431)
156 PRK05166 histidinol-phosphate 99.9 7.3E-21 1.6E-25 191.0 30.1 328 58-442 39-370 (371)
157 COG2008 GLY1 Threonine aldolas 99.9 1.2E-21 2.6E-26 184.5 22.6 326 61-441 5-341 (342)
158 PRK04635 histidinol-phosphate 99.9 2.5E-21 5.5E-26 193.1 26.3 284 99-439 64-351 (354)
159 KOG0257 Kynurenine aminotransf 99.9 3.5E-21 7.6E-26 183.3 25.6 306 41-381 18-344 (420)
160 PRK06107 aspartate aminotransf 99.9 1.7E-20 3.7E-25 190.4 32.5 345 56-444 34-401 (402)
161 PRK07908 hypothetical protein; 99.9 9.3E-21 2E-25 188.8 29.9 319 58-442 25-346 (349)
162 PRK03317 histidinol-phosphate 99.9 6.9E-21 1.5E-25 191.1 28.6 318 67-442 39-363 (368)
163 PRK07568 aspartate aminotransf 99.9 2.7E-20 5.8E-25 189.0 33.1 341 57-444 32-393 (397)
164 PRK07505 hypothetical protein; 99.9 2.8E-20 6.1E-25 188.8 31.7 344 53-442 44-398 (402)
165 TIGR03576 pyridox_MJ0158 pyrid 99.9 2.3E-20 5E-25 184.3 30.2 328 39-441 7-345 (346)
166 PRK09148 aminotransferase; Val 99.9 5.3E-20 1.2E-24 186.8 33.6 350 53-444 28-391 (405)
167 PRK08153 histidinol-phosphate 99.9 2.2E-20 4.7E-25 187.3 30.4 328 59-446 36-368 (369)
168 PRK13238 tnaA tryptophanase/L- 99.9 3.4E-20 7.4E-25 189.2 32.0 350 53-445 34-435 (460)
169 PRK05367 glycine dehydrogenase 99.9 4.8E-20 1E-24 200.6 35.0 351 31-438 53-437 (954)
170 PRK03321 putative aminotransfe 99.9 7E-21 1.5E-25 190.0 26.2 310 68-442 36-350 (352)
171 PRK06425 histidinol-phosphate 99.9 1.6E-20 3.4E-25 185.7 27.4 282 98-441 43-331 (332)
172 PF00155 Aminotran_1_2: Aminot 99.9 1.8E-20 4E-25 187.9 28.0 308 84-437 37-363 (363)
173 PRK04781 histidinol-phosphate 99.9 3.9E-20 8.4E-25 185.1 29.9 291 98-441 62-361 (364)
174 PRK08636 aspartate aminotransf 99.9 1.5E-19 3.2E-24 183.6 33.3 350 54-443 32-400 (403)
175 PLN02231 alanine transaminase 99.9 2.3E-19 5.1E-24 186.2 35.4 346 58-444 132-528 (534)
176 PRK05968 hypothetical protein; 99.9 2.9E-20 6.2E-25 186.9 27.0 285 99-445 67-388 (389)
177 PRK14808 histidinol-phosphate 99.9 6.8E-20 1.5E-24 181.1 28.9 305 58-439 22-333 (335)
178 PRK10534 L-threonine aldolase; 99.9 1.6E-20 3.4E-25 186.0 24.2 315 61-441 5-331 (333)
179 PLN02271 serine hydroxymethylt 99.9 2.4E-19 5.3E-24 180.3 32.7 344 68-442 160-539 (586)
180 TIGR01365 serC_2 phosphoserine 99.9 3.9E-20 8.4E-25 182.8 26.0 312 88-442 32-372 (374)
181 PRK08861 cystathionine gamma-s 99.9 6.2E-20 1.4E-24 183.2 27.7 292 91-446 53-386 (388)
182 PRK08175 aminotransferase; Val 99.9 5.1E-19 1.1E-23 179.3 33.5 344 54-441 28-387 (395)
183 PRK08134 O-acetylhomoserine am 99.9 4E-19 8.6E-24 180.0 32.4 304 99-447 68-431 (433)
184 PRK09028 cystathionine beta-ly 99.9 6.7E-20 1.5E-24 182.7 26.0 293 90-446 60-390 (394)
185 PRK06855 aminotransferase; Val 99.9 4.2E-19 9.1E-24 181.5 32.6 337 67-443 48-429 (433)
186 TIGR01140 L_thr_O3P_dcar L-thr 99.9 8.3E-20 1.8E-24 180.4 26.5 275 98-437 50-329 (330)
187 PRK07392 threonine-phosphate d 99.9 3.2E-19 7E-24 178.4 30.8 325 58-442 25-358 (360)
188 PLN02672 methionine S-methyltr 99.9 3.2E-19 6.8E-24 193.6 32.0 343 54-443 696-1080(1082)
189 PRK07504 O-succinylhomoserine 99.9 3.4E-19 7.4E-24 179.5 30.2 288 99-445 69-397 (398)
190 TIGR02379 ECA_wecE TDP-4-keto- 99.9 5.9E-19 1.3E-23 176.4 31.6 329 69-441 10-375 (376)
191 TIGR01324 cysta_beta_ly_B cyst 99.9 5.7E-20 1.2E-24 183.3 24.1 290 90-443 49-376 (377)
192 PRK06767 methionine gamma-lyas 99.9 1.3E-19 2.8E-24 182.2 26.8 285 99-443 65-385 (386)
193 TIGR01329 cysta_beta_ly_E cyst 99.9 6.4E-20 1.4E-24 183.7 24.2 284 97-443 49-375 (378)
194 cd00614 CGS_like CGS_like: Cys 99.9 1.7E-19 3.8E-24 180.5 27.2 283 99-441 44-368 (369)
195 PRK07590 L,L-diaminopimelate a 99.9 4.4E-19 9.5E-24 180.5 30.5 356 39-439 17-407 (409)
196 PRK14809 histidinol-phosphate 99.9 5.2E-19 1.1E-23 176.8 30.5 321 55-441 30-355 (357)
197 COG1168 MalY Bifunctional PLP- 99.9 9.5E-19 2.1E-23 165.2 30.2 323 68-431 39-374 (388)
198 PLN02242 methionine gamma-lyas 99.9 9.9E-20 2.2E-24 183.9 25.3 287 99-445 80-417 (418)
199 PRK08133 O-succinylhomoserine 99.9 2.3E-19 5E-24 180.4 27.8 286 97-442 63-389 (390)
200 PLN02450 1-aminocyclopropane-1 99.9 2.6E-19 5.7E-24 184.1 28.7 315 87-444 82-431 (468)
201 KOG1368 Threonine aldolase [Am 99.9 6.9E-20 1.5E-24 165.9 20.8 315 67-438 33-363 (384)
202 PRK08045 cystathionine gamma-s 99.9 3.9E-19 8.5E-24 178.0 28.7 288 99-446 56-385 (386)
203 PRK03244 argD acetylornithine 99.9 8.5E-19 1.9E-23 177.9 31.3 334 53-445 41-396 (398)
204 PLN02376 1-aminocyclopropane-1 99.9 5E-19 1.1E-23 182.7 29.8 312 87-443 90-438 (496)
205 cd00610 OAT_like Acetyl ornith 99.9 5.6E-19 1.2E-23 180.3 29.7 342 53-440 34-412 (413)
206 PRK08776 cystathionine gamma-s 99.9 6.2E-19 1.4E-23 177.6 29.5 289 98-446 63-393 (405)
207 TIGR01328 met_gam_lyase methio 99.9 2.9E-19 6.2E-24 179.6 27.0 286 99-443 63-390 (391)
208 PRK08064 cystathionine beta-ly 99.9 2.1E-19 4.6E-24 180.6 25.9 282 99-445 58-384 (390)
209 PRK08249 cystathionine gamma-s 99.9 5.6E-19 1.2E-23 177.7 28.8 288 99-446 68-396 (398)
210 PRK00854 rocD ornithine--oxo-a 99.9 1.5E-18 3.3E-23 176.2 32.3 324 67-442 57-400 (401)
211 cd00617 Tnase_like Tryptophana 99.9 1.1E-18 2.4E-23 175.7 30.7 336 70-447 32-412 (431)
212 cd00615 Orn_deC_like Ornithine 99.9 1.5E-20 3.4E-25 182.3 16.7 228 96-360 60-294 (294)
213 PRK07050 cystathionine beta-ly 99.9 1.7E-19 3.7E-24 181.3 24.5 287 99-444 69-392 (394)
214 PRK08574 cystathionine gamma-s 99.8 3.5E-19 7.6E-24 178.5 26.2 288 91-443 53-384 (385)
215 PRK05839 hypothetical protein; 99.8 3.1E-18 6.7E-23 172.1 32.7 335 54-441 23-372 (374)
216 PRK07811 cystathionine gamma-s 99.8 7.2E-19 1.6E-23 176.7 27.9 283 100-442 66-387 (388)
217 PRK08114 cystathionine beta-ly 99.8 4.6E-19 1E-23 176.2 25.9 294 89-444 60-394 (395)
218 PLN02509 cystathionine beta-ly 99.8 2.4E-19 5.2E-24 181.9 24.3 285 96-442 134-460 (464)
219 PRK07865 N-succinyldiaminopime 99.8 1.6E-18 3.4E-23 173.8 29.6 325 53-437 25-362 (364)
220 PRK03967 histidinol-phosphate 99.8 1.2E-18 2.6E-23 172.5 28.4 299 67-442 31-333 (337)
221 COG3844 Kynureninase [Amino ac 99.8 2.8E-18 6.1E-23 157.6 27.6 307 90-444 71-403 (407)
222 TIGR00461 gcvP glycine dehydro 99.8 6.4E-18 1.4E-22 180.9 34.8 353 31-438 41-426 (939)
223 TIGR03539 DapC_actino succinyl 99.8 3.4E-18 7.4E-23 170.8 30.9 322 54-435 20-354 (357)
224 PRK07810 O-succinylhomoserine 99.8 2.4E-18 5.2E-23 173.4 29.6 284 99-441 74-402 (403)
225 PRK05613 O-acetylhomoserine am 99.8 2.1E-18 4.7E-23 174.5 29.1 300 98-443 72-436 (437)
226 PRK09440 avtA valine--pyruvate 99.8 7.3E-18 1.6E-22 172.1 33.4 350 58-446 33-414 (416)
227 PRK15407 lipopolysaccharide bi 99.8 7.3E-18 1.6E-22 171.4 33.0 316 99-442 67-435 (438)
228 PRK06234 methionine gamma-lyas 99.8 9.1E-19 2E-23 176.7 26.2 292 90-444 63-398 (400)
229 PRK08247 cystathionine gamma-s 99.8 4.5E-19 9.8E-24 177.1 23.8 283 99-443 56-364 (366)
230 PF01041 DegT_DnrJ_EryC1: DegT 99.8 2.5E-18 5.4E-23 171.9 28.9 326 70-438 5-363 (363)
231 PRK08248 O-acetylhomoserine am 99.8 4.4E-18 9.6E-23 172.5 30.8 300 100-446 69-430 (431)
232 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 6.2E-18 1.4E-22 169.8 31.6 328 70-441 11-374 (375)
233 PF02347 GDC-P: Glycine cleava 99.8 2.1E-18 4.5E-23 170.0 27.1 354 31-437 42-429 (429)
234 TIGR03542 DAPAT_plant LL-diami 99.8 4.3E-18 9.3E-23 172.8 30.3 337 55-439 33-400 (402)
235 TIGR00707 argD acetylornithine 99.8 2.7E-18 5.9E-23 173.2 28.7 322 67-440 43-378 (379)
236 TIGR01325 O_suc_HS_sulf O-succ 99.8 5.9E-19 1.3E-23 177.1 23.6 283 98-441 57-380 (380)
237 COG1167 ARO8 Transcriptional r 99.8 1.4E-17 3E-22 170.5 34.0 334 70-444 107-456 (459)
238 PRK07503 methionine gamma-lyas 99.8 2.9E-18 6.4E-23 173.0 27.6 287 99-446 69-399 (403)
239 PRK04073 rocD ornithine--oxo-a 99.8 8.5E-18 1.8E-22 170.2 30.8 336 52-441 37-395 (396)
240 PTZ00376 aspartate aminotransf 99.8 9.3E-19 2E-23 177.7 23.8 309 85-442 66-402 (404)
241 PLN02607 1-aminocyclopropane-1 99.8 4.4E-18 9.5E-23 173.8 28.5 316 88-445 92-439 (447)
242 TIGR02080 O_succ_thio_ly O-suc 99.8 4E-18 8.7E-23 170.7 27.7 284 99-442 55-380 (382)
243 PRK06460 hypothetical protein; 99.8 3.5E-18 7.7E-23 171.0 27.1 285 99-444 49-375 (376)
244 PRK07269 cystathionine gamma-s 99.8 8.2E-19 1.8E-23 174.3 22.1 287 91-442 54-363 (364)
245 COG1103 Archaea-specific pyrid 99.8 4.6E-18 1E-22 152.1 24.1 299 101-443 67-380 (382)
246 PTZ00125 ornithine aminotransf 99.8 2.2E-17 4.9E-22 167.7 32.5 349 53-446 29-398 (400)
247 PRK07812 O-acetylhomoserine am 99.8 1.8E-17 3.8E-22 167.8 31.2 300 99-446 73-434 (436)
248 PRK05967 cystathionine beta-ly 99.8 2.6E-18 5.6E-23 171.0 23.7 291 95-445 64-393 (395)
249 PRK09275 aspartate aminotransf 99.8 1.8E-17 3.8E-22 170.0 30.4 360 59-444 104-518 (527)
250 PRK07582 cystathionine gamma-l 99.8 2.3E-18 5.1E-23 171.8 23.1 281 91-443 51-365 (366)
251 PRK06702 O-acetylhomoserine am 99.8 1.6E-17 3.5E-22 167.1 29.2 308 90-447 60-428 (432)
252 PRK05664 threonine-phosphate d 99.8 7.9E-18 1.7E-22 166.2 26.6 271 99-443 53-328 (330)
253 PRK06959 putative threonine-ph 99.8 9.6E-18 2.1E-22 166.0 27.2 275 98-446 56-336 (339)
254 PRK05994 O-acetylhomoserine am 99.8 2.5E-17 5.4E-22 167.2 30.7 293 99-442 67-425 (427)
255 PRK08354 putative aminotransfe 99.8 3E-17 6.4E-22 160.8 30.2 285 68-440 21-309 (311)
256 PLN02368 alanine transaminase 99.8 5.1E-18 1.1E-22 171.0 25.1 273 69-378 83-392 (407)
257 PRK06084 O-acetylhomoserine am 99.8 2.4E-17 5.2E-22 167.0 30.0 299 99-444 62-423 (425)
258 PRK08637 hypothetical protein; 99.8 8.6E-18 1.9E-22 169.8 26.4 329 71-444 24-387 (388)
259 PRK05939 hypothetical protein; 99.8 2.8E-17 6E-22 165.2 29.5 301 90-442 46-395 (397)
260 PRK09257 aromatic amino acid a 99.8 1E-17 2.3E-22 169.7 26.7 323 70-440 47-395 (396)
261 PLN02452 phosphoserine transam 99.8 2.4E-17 5.1E-22 163.0 28.4 305 89-442 46-362 (365)
262 PRK07671 cystathionine beta-ly 99.8 1.2E-17 2.5E-22 167.2 24.9 283 98-442 53-377 (377)
263 PRK01278 argD acetylornithine 99.8 1.3E-16 2.8E-21 161.3 32.9 340 53-443 29-388 (389)
264 PRK06176 cystathionine gamma-s 99.8 1.1E-17 2.4E-22 167.4 24.5 284 99-444 54-379 (380)
265 TIGR01885 Orn_aminotrans ornit 99.8 5.5E-17 1.2E-21 164.6 29.7 339 53-441 35-400 (401)
266 PRK02627 acetylornithine amino 99.8 9.4E-17 2E-21 163.0 31.3 339 52-444 36-395 (396)
267 COG0112 GlyA Glycine/serine hy 99.8 3.5E-17 7.6E-22 155.2 25.8 334 69-445 39-392 (413)
268 TIGR03246 arg_catab_astC succi 99.8 1.7E-16 3.6E-21 160.6 32.2 340 53-444 33-396 (397)
269 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 6.8E-17 1.5E-21 164.0 29.3 292 99-441 61-417 (418)
270 PRK04311 selenocysteine syntha 99.8 1.5E-16 3.2E-21 161.6 30.7 322 67-441 97-462 (464)
271 PF00464 SHMT: Serine hydroxym 99.8 2.5E-17 5.4E-22 162.0 23.7 323 68-426 32-384 (399)
272 TIGR03801 asp_4_decarbox aspar 99.8 1.9E-16 4E-21 162.3 30.9 359 60-444 99-517 (521)
273 COG2873 MET17 O-acetylhomoseri 99.8 9.8E-17 2.1E-21 150.4 25.6 306 89-443 60-425 (426)
274 PLN02397 aspartate transaminas 99.8 1E-16 2.3E-21 163.3 27.4 336 58-442 51-420 (423)
275 KOG1357 Serine palmitoyltransf 99.8 5.3E-18 1.1E-22 162.1 15.6 301 92-440 179-499 (519)
276 PRK02936 argD acetylornithine 99.8 6.9E-16 1.5E-20 155.5 30.7 332 53-440 27-376 (377)
277 TIGR00474 selA seryl-tRNA(sec) 99.8 4.8E-16 1E-20 157.5 29.0 290 66-400 91-423 (454)
278 PRK12381 bifunctional succinyl 99.8 9.6E-16 2.1E-20 155.6 31.4 348 53-447 37-403 (406)
279 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 3.1E-17 6.6E-22 162.0 19.5 268 97-402 68-397 (417)
280 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 6.2E-16 1.3E-20 153.6 28.4 290 90-442 54-386 (386)
281 PRK05093 argD bifunctional N-s 99.8 2.7E-15 5.9E-20 152.3 33.6 339 53-444 38-401 (403)
282 PRK12462 phosphoserine aminotr 99.8 1.2E-15 2.6E-20 149.2 29.3 305 89-442 43-361 (364)
283 PRK06434 cystathionine gamma-l 99.8 9E-17 2E-21 160.0 21.8 285 89-442 62-383 (384)
284 TIGR02618 tyr_phenol_ly tyrosi 99.8 8.1E-16 1.8E-20 152.4 27.9 338 67-447 47-430 (450)
285 PRK07049 methionine gamma-lyas 99.7 1.6E-15 3.5E-20 154.0 29.2 289 100-442 88-425 (427)
286 COG0403 GcvP Glycine cleavage 99.7 4.1E-15 8.8E-20 142.4 29.7 359 33-440 53-447 (450)
287 PRK03715 argD acetylornithine 99.7 5.2E-15 1.1E-19 149.0 31.6 339 53-444 34-394 (395)
288 PLN02624 ornithine-delta-amino 99.7 1.1E-14 2.4E-19 150.0 34.3 327 67-444 91-445 (474)
289 COG4992 ArgD Ornithine/acetylo 99.7 6.9E-15 1.5E-19 141.8 29.0 337 53-446 40-401 (404)
290 PRK15029 arginine decarboxylas 99.7 3.3E-15 7.2E-20 158.0 28.8 229 97-363 207-466 (755)
291 cd01494 AAT_I Aspartate aminot 99.7 1.2E-16 2.6E-21 141.7 15.1 165 98-291 3-170 (170)
292 COG0626 MetC Cystathionine bet 99.7 2.9E-15 6.4E-20 146.8 26.0 291 90-444 62-395 (396)
293 KOG0256 1-aminocyclopropane-1- 99.7 3.8E-15 8.2E-20 141.2 25.4 296 87-423 117-442 (471)
294 PRK13237 tyrosine phenol-lyase 99.7 8.5E-15 1.9E-19 145.6 28.9 335 70-447 57-437 (460)
295 PRK04260 acetylornithine amino 99.7 1.6E-14 3.6E-19 145.3 31.7 314 68-440 45-374 (375)
296 PRK05964 adenosylmethionine--8 99.7 2.2E-14 4.8E-19 146.3 31.0 353 52-444 39-423 (423)
297 PRK04612 argD acetylornithine 99.7 3.8E-14 8.2E-19 143.2 31.0 351 52-445 37-405 (408)
298 PLN02760 4-aminobutyrate:pyruv 99.7 2.7E-14 5.8E-19 147.4 30.4 357 53-446 87-494 (504)
299 PRK11522 putrescine--2-oxoglut 99.7 7.7E-14 1.7E-18 142.6 30.8 351 53-448 80-456 (459)
300 PRK13578 ornithine decarboxyla 99.7 3.4E-14 7.4E-19 148.9 26.1 306 98-445 177-567 (720)
301 PRK08117 4-aminobutyrate amino 99.7 1.1E-13 2.4E-18 141.6 28.6 346 52-445 40-431 (433)
302 TIGR00713 hemL glutamate-1-sem 99.7 8.5E-14 1.8E-18 142.4 27.7 341 52-443 45-422 (423)
303 PRK12566 glycine dehydrogenase 99.6 2.2E-13 4.8E-18 145.4 31.3 350 31-437 56-438 (954)
304 PF01212 Beta_elim_lyase: Beta 99.6 4.5E-16 9.8E-21 148.9 9.6 254 68-369 7-277 (290)
305 PRK13360 omega amino acid--pyr 99.6 4.5E-13 9.8E-18 136.7 31.0 355 52-444 43-441 (442)
306 PLN00144 acetylornithine trans 99.6 1.1E-12 2.4E-17 131.8 33.0 336 53-444 13-381 (382)
307 PRK15400 lysine decarboxylase 99.6 6.6E-14 1.4E-18 146.6 24.8 297 98-443 198-559 (714)
308 PRK09221 beta alanine--pyruvat 99.6 4.4E-13 9.6E-18 136.9 30.3 356 52-444 46-444 (445)
309 PRK08360 4-aminobutyrate amino 99.6 5.5E-13 1.2E-17 136.1 31.0 345 53-446 39-429 (443)
310 PRK06541 hypothetical protein; 99.6 5.5E-13 1.2E-17 136.7 30.9 353 53-444 50-456 (460)
311 PF05889 SLA_LP_auto_ag: Solub 99.6 1E-13 2.2E-18 133.6 22.9 308 100-442 61-389 (389)
312 PRK15399 lysine decarboxylase 99.6 6.4E-13 1.4E-17 139.3 30.1 296 99-443 199-559 (713)
313 TIGR03372 putres_am_tran putre 99.6 1.9E-12 4.2E-17 131.5 32.3 338 53-441 73-442 (442)
314 COG0160 GabT 4-aminobutyrate a 99.6 1.5E-12 3.3E-17 129.4 29.9 344 53-444 54-446 (447)
315 KOG0633 Histidinol phosphate a 99.6 3E-14 6.5E-19 127.2 15.9 281 118-440 87-374 (375)
316 PRK05769 4-aminobutyrate amino 99.6 2.1E-12 4.5E-17 131.9 31.7 341 53-444 52-440 (441)
317 PRK06105 aminotransferase; Pro 99.6 1.3E-12 2.7E-17 134.1 30.1 356 53-446 46-452 (460)
318 COG0001 HemL Glutamate-1-semia 99.6 1.9E-12 4.1E-17 126.4 29.4 338 52-446 50-431 (432)
319 PRK00062 glutamate-1-semialdeh 99.6 7.8E-13 1.7E-17 135.0 28.0 337 53-444 48-425 (426)
320 PRK05965 hypothetical protein; 99.6 4.1E-12 9E-17 130.3 33.3 359 53-446 44-450 (459)
321 PRK08593 4-aminobutyrate amino 99.6 1.4E-12 3E-17 133.4 28.9 347 52-446 39-432 (445)
322 PRK07678 aminotransferase; Val 99.6 8.9E-12 1.9E-16 127.7 34.1 359 52-445 44-451 (451)
323 PRK04013 argD acetylornithine/ 99.6 3.3E-12 7.1E-17 126.7 29.9 317 53-444 22-361 (364)
324 KOG0634 Aromatic amino acid am 99.6 2.5E-12 5.3E-17 123.3 26.1 323 85-446 94-466 (472)
325 KOG0053 Cystathionine beta-lya 99.6 1.9E-12 4.2E-17 125.5 25.3 285 100-444 82-407 (409)
326 PRK12403 putative aminotransfe 99.6 9.1E-12 2E-16 127.8 31.4 353 53-445 52-454 (460)
327 PRK06062 hypothetical protein; 99.6 1.1E-11 2.4E-16 126.9 31.7 345 53-447 51-449 (451)
328 PRK09264 diaminobutyrate--2-ox 99.6 2E-11 4.4E-16 124.5 33.5 348 52-446 36-419 (425)
329 TIGR00508 bioA adenosylmethion 99.5 8E-12 1.7E-16 127.2 30.2 348 53-443 43-426 (427)
330 TIGR02407 ectoine_ectB diamino 99.5 2.1E-11 4.6E-16 123.7 33.0 342 53-442 33-411 (412)
331 COG3977 Alanine-alpha-ketoisov 99.5 6.8E-12 1.5E-16 114.5 25.9 361 39-444 16-412 (417)
332 PRK09792 4-aminobutyrate trans 99.5 2.3E-11 5E-16 123.8 33.2 345 52-442 37-420 (421)
333 PRK07482 hypothetical protein; 99.5 2.4E-11 5.1E-16 124.8 33.4 358 53-444 48-455 (461)
334 PRK07495 4-aminobutyrate amino 99.5 5.2E-11 1.1E-15 121.1 35.3 348 53-446 38-424 (425)
335 PRK07986 adenosylmethionine--8 99.5 7.3E-12 1.6E-16 127.1 28.9 349 52-442 40-422 (428)
336 TIGR00700 GABAtrnsam 4-aminobu 99.5 1.3E-11 2.8E-16 125.9 30.4 341 52-441 30-418 (420)
337 PRK06058 4-aminobutyrate amino 99.5 8E-12 1.7E-16 128.0 28.7 343 53-443 54-442 (443)
338 PRK06173 adenosylmethionine--8 99.5 1.2E-11 2.5E-16 125.8 29.5 351 52-444 41-426 (429)
339 PRK05639 4-aminobutyrate amino 99.5 2.7E-11 5.8E-16 124.1 32.2 344 53-445 51-445 (457)
340 PLN02482 glutamate-1-semialdeh 99.5 1.5E-11 3.3E-16 126.0 30.1 325 67-444 115-474 (474)
341 PRK12389 glutamate-1-semialdeh 99.5 1.9E-11 4.1E-16 124.7 30.7 336 53-443 51-427 (428)
342 PRK06082 4-aminobutyrate amino 99.5 1.3E-11 2.8E-16 126.6 29.4 327 67-444 87-452 (459)
343 KOG1358 Serine palmitoyltransf 99.5 5.2E-12 1.1E-16 119.3 23.7 346 52-443 91-465 (467)
344 PRK08088 4-aminobutyrate amino 99.5 3.8E-11 8.2E-16 122.7 31.7 345 53-444 39-424 (425)
345 PRK05630 adenosylmethionine--8 99.5 2.7E-11 5.8E-16 123.0 30.1 350 53-443 38-420 (422)
346 PRK06777 4-aminobutyrate amino 99.5 5.6E-11 1.2E-15 121.0 32.0 340 53-441 38-419 (421)
347 PRK07481 hypothetical protein; 99.5 4.4E-11 9.4E-16 122.6 31.0 357 53-444 40-446 (449)
348 PRK07036 hypothetical protein; 99.5 7.8E-11 1.7E-15 121.1 32.6 355 52-444 48-453 (466)
349 TIGR00709 dat 2,4-diaminobutyr 99.5 7.5E-11 1.6E-15 120.8 32.1 347 52-444 36-436 (442)
350 PRK07480 putative aminotransfe 99.5 4.7E-11 1E-15 122.3 30.5 355 53-446 48-451 (456)
351 PRK07030 adenosylmethionine--8 99.5 7.2E-11 1.6E-15 121.2 31.8 356 52-444 44-447 (466)
352 PRK06943 adenosylmethionine--8 99.5 4.9E-11 1.1E-15 122.1 30.3 354 52-444 51-447 (453)
353 PRK06917 hypothetical protein; 99.5 5.6E-11 1.2E-15 121.6 30.6 362 52-445 28-439 (447)
354 PRK06916 adenosylmethionine--8 99.5 6.5E-11 1.4E-15 121.5 30.5 355 52-445 53-457 (460)
355 PRK00615 glutamate-1-semialdeh 99.5 4.3E-11 9.3E-16 121.6 28.7 340 53-445 51-430 (433)
356 COG1982 LdcC Arginine/lysine/o 99.5 1.4E-11 3.1E-16 124.2 24.5 265 99-402 74-372 (557)
357 PRK07046 aminotransferase; Val 99.5 1.3E-10 2.9E-15 118.8 30.3 335 53-445 73-452 (453)
358 PRK07483 hypothetical protein; 99.5 1.7E-10 3.8E-15 117.9 31.0 359 53-446 28-440 (443)
359 KOG3846 L-kynurenine hydrolase 99.4 4.7E-11 1E-15 109.4 23.5 308 99-446 115-464 (465)
360 KOG2467 Glycine/serine hydroxy 99.4 7.4E-11 1.6E-15 110.6 25.2 344 69-442 53-425 (477)
361 TIGR02617 tnaA_trp_ase tryptop 99.4 5.6E-11 1.2E-15 117.1 25.2 340 68-447 55-445 (467)
362 TIGR03251 LAT_fam L-lysine 6-t 99.4 1.3E-10 2.9E-15 118.5 29.1 350 53-439 36-430 (431)
363 PRK06938 diaminobutyrate--2-ox 99.4 2.6E-10 5.6E-15 117.1 31.2 347 53-444 61-461 (464)
364 PRK06918 4-aminobutyrate amino 99.4 3.4E-10 7.5E-15 116.4 31.8 348 53-446 52-446 (451)
365 PRK08742 adenosylmethionine--8 99.4 9.3E-10 2E-14 113.0 33.4 359 53-445 62-469 (472)
366 PRK06149 hypothetical protein; 99.4 1.5E-10 3.2E-15 129.3 29.4 342 54-443 584-970 (972)
367 COG0161 BioA Adenosylmethionin 99.4 1.7E-10 3.7E-15 114.2 26.1 340 65-446 58-446 (449)
368 PRK08297 L-lysine aminotransfe 99.4 2.9E-10 6.2E-15 116.3 28.6 354 53-444 43-442 (443)
369 PRK06148 hypothetical protein; 99.4 1.9E-10 4.1E-15 128.5 28.3 343 54-444 623-1011(1013)
370 TIGR00699 GABAtrns_euk 4-amino 99.4 4.1E-10 8.9E-15 114.8 27.8 346 53-440 56-463 (464)
371 PRK06209 glutamate-1-semialdeh 99.4 2.1E-10 4.5E-15 117.1 25.2 334 53-446 46-408 (431)
372 PRK06931 diaminobutyrate--2-ox 99.4 1.5E-09 3.3E-14 111.4 31.2 348 52-445 55-456 (459)
373 KOG0258 Alanine aminotransfera 99.3 1.5E-09 3.3E-14 102.9 27.2 324 72-425 91-456 (475)
374 KOG1402 Ornithine aminotransfe 99.2 1.2E-08 2.6E-13 94.9 26.1 326 67-441 75-425 (427)
375 COG1448 TyrB Aspartate/tyrosin 99.2 1.9E-09 4.1E-14 102.7 21.3 346 49-440 19-395 (396)
376 COG1921 SelA Selenocysteine sy 99.2 4.3E-09 9.2E-14 102.0 20.3 223 68-337 39-271 (395)
377 COG1932 SerC Phosphoserine ami 99.1 3.5E-08 7.5E-13 93.9 25.2 336 58-443 7-363 (365)
378 KOG1404 Alanine-glyoxylate ami 99.1 2.1E-08 4.5E-13 95.5 22.1 333 53-435 48-430 (442)
379 KOG1401 Acetylornithine aminot 99.1 1.3E-07 2.9E-12 90.8 27.1 343 66-445 71-432 (433)
380 PLN02974 adenosylmethionine-8- 99.0 9.4E-07 2E-11 95.8 32.8 340 68-441 383-816 (817)
381 COG3033 TnaA Tryptophanase [Am 99.0 2E-07 4.3E-12 87.9 23.7 319 87-442 75-443 (471)
382 PF12897 Aminotran_MocR: Alani 98.9 3.1E-06 6.8E-11 81.3 27.7 312 99-442 73-414 (425)
383 PF06838 Met_gamma_lyase: Meth 98.9 3.5E-07 7.6E-12 87.1 21.0 255 97-398 56-333 (403)
384 PF00202 Aminotran_3: Aminotra 98.9 6.9E-07 1.5E-11 88.4 23.5 259 67-361 32-316 (339)
385 PF03841 SelA: L-seryl-tRNA se 98.8 7.5E-09 1.6E-13 99.5 5.6 163 99-292 51-227 (367)
386 KOG3843 Predicted serine hydro 98.8 3.5E-08 7.7E-13 89.0 8.7 316 98-447 60-406 (432)
387 KOG2040 Glycine dehydrogenase 98.7 5.9E-06 1.3E-10 83.6 22.5 344 34-438 97-478 (1001)
388 KOG1412 Aspartate aminotransfe 98.4 0.00026 5.7E-09 66.0 24.1 300 108-446 88-408 (410)
389 KOG2790 Phosphoserine aminotra 98.4 0.00011 2.4E-09 67.5 20.7 342 58-442 9-367 (370)
390 KOG0630 Predicted pyridoxal-de 98.3 6.5E-06 1.4E-10 80.6 12.5 196 154-369 231-441 (838)
391 COG4100 Cystathionine beta-lya 98.3 4.3E-05 9.2E-10 70.7 15.6 151 100-279 70-235 (416)
392 KOG1403 Predicted alanine-glyo 98.3 4.3E-05 9.4E-10 70.6 15.4 289 119-446 104-440 (452)
393 PF04864 Alliinase_C: Allinase 98.3 4.4E-05 9.6E-10 72.6 15.8 296 92-438 44-360 (363)
394 KOG1411 Aspartate aminotransfe 97.7 0.0018 4E-08 61.4 15.1 345 49-440 45-422 (427)
395 KOG1405 4-aminobutyrate aminot 97.4 0.012 2.7E-07 56.1 17.0 188 216-443 289-483 (484)
396 PLN02994 1-aminocyclopropane-1 94.8 0.27 5.8E-06 42.4 9.3 63 87-165 88-152 (153)
397 PRK11633 cell division protein 62.6 18 0.0004 33.2 5.6 51 387-439 162-212 (226)
398 COG2515 Acd 1-aminocyclopropan 57.9 1.7E+02 0.0037 28.2 11.1 101 120-230 66-177 (323)
399 PF02310 B12-binding: B12 bind 57.4 70 0.0015 25.7 7.9 73 166-249 19-92 (121)
400 cd01455 vWA_F11C1-5a_type Von 56.9 21 0.00046 31.9 4.8 36 203-244 113-148 (191)
401 COG1954 GlpP Glycerol-3-phosph 53.5 22 0.00047 30.9 4.2 50 191-249 12-61 (181)
402 KOG4392 RNA polymerase, subuni 50.8 39 0.00084 27.0 4.8 80 373-455 28-109 (117)
403 cd06927 RNAP_L L subunit of Ar 48.0 1.2E+02 0.0026 23.0 8.2 66 374-446 9-76 (83)
404 TIGR02026 BchE magnesium-proto 45.9 98 0.0021 32.4 8.6 73 168-249 29-103 (497)
405 PF02603 Hpr_kinase_N: HPr Ser 43.4 28 0.0006 28.9 3.3 38 194-243 73-110 (127)
406 PF13407 Peripla_BP_4: Peripla 42.0 1.5E+02 0.0033 27.2 8.7 66 166-243 19-85 (257)
407 PLN02672 methionine S-methyltr 41.0 4.9E+02 0.011 30.2 13.4 144 74-246 408-565 (1082)
408 COG0296 GlgB 1,4-alpha-glucan 40.7 23 0.0005 37.8 2.9 40 205-250 200-239 (628)
409 COG3147 DedD Uncharacterized p 40.4 86 0.0019 28.4 5.9 51 387-439 164-214 (226)
410 COG0031 CysK Cysteine synthase 40.2 72 0.0016 30.8 5.9 77 120-208 65-142 (300)
411 PRK14994 SAM-dependent 16S rib 39.7 3E+02 0.0065 26.5 10.1 85 155-248 39-124 (287)
412 COG1105 FruK Fructose-1-phosph 37.5 2.3E+02 0.0049 27.6 8.8 55 188-248 109-169 (310)
413 COG2870 RfaE ADP-heptose synth 37.4 72 0.0016 31.9 5.5 79 158-245 95-178 (467)
414 PF00403 HMA: Heavy-metal-asso 36.3 1.4E+02 0.0031 20.5 6.6 52 348-400 10-61 (62)
415 COG2099 CobK Precorrin-6x redu 34.1 93 0.002 29.1 5.4 27 216-248 50-76 (257)
416 TIGR01536 asn_synth_AEB aspara 33.6 4.3E+02 0.0093 27.3 11.1 127 94-248 236-366 (467)
417 COG1504 Uncharacterized conser 31.9 1.2E+02 0.0026 24.3 4.8 42 188-231 47-88 (121)
418 TIGR00288 conserved hypothetic 31.3 2.8E+02 0.006 24.1 7.5 77 156-245 60-136 (160)
419 cd01422 MGS Methylglyoxal synt 30.2 2.9E+02 0.0064 22.2 8.3 75 156-242 29-105 (115)
420 PRK01146 DNA-directed RNA poly 29.2 2.6E+02 0.0056 21.3 8.4 61 364-427 3-65 (85)
421 COG1606 ATP-utilizing enzymes 28.7 1.3E+02 0.0028 28.2 5.3 97 120-249 21-124 (269)
422 PF04309 G3P_antiterm: Glycero 28.2 15 0.00032 32.4 -0.8 49 193-250 10-58 (175)
423 cd07029 RNAP_I_III_AC19 AC19 s 27.8 2.8E+02 0.006 21.1 8.5 53 374-427 9-63 (85)
424 PF11080 DUF2622: Protein of u 27.5 2.5E+02 0.0054 22.0 5.9 63 375-438 10-73 (96)
425 TIGR03573 WbuX N-acetyl sugar 27.2 6.1E+02 0.013 25.0 12.7 104 119-249 62-171 (343)
426 smart00642 Aamy Alpha-amylase 26.9 55 0.0012 28.5 2.6 30 214-249 65-94 (166)
427 PF00128 Alpha-amylase: Alpha 26.6 53 0.0011 31.4 2.7 35 209-249 42-76 (316)
428 PF05368 NmrA: NmrA-like famil 26.2 4.9E+02 0.011 23.5 9.7 67 157-231 27-93 (233)
429 PLN02913 dihydrofolate synthet 26.0 2.7E+02 0.0059 29.3 8.0 70 373-444 75-147 (510)
430 TIGR00334 5S_RNA_mat_M5 ribonu 25.6 1.4E+02 0.0031 26.2 4.8 52 188-250 10-61 (174)
431 TIGR00177 molyb_syn molybdenum 24.9 3.2E+02 0.007 22.9 7.0 58 163-225 28-88 (144)
432 COG1066 Sms Predicted ATP-depe 24.5 5.2E+02 0.011 26.3 9.0 80 155-243 122-215 (456)
433 PF02571 CbiJ: Precorrin-6x re 23.6 1.2E+02 0.0027 28.4 4.5 28 215-248 49-76 (249)
434 PRK08057 cobalt-precorrin-6x r 23.1 2E+02 0.0043 27.0 5.7 29 215-249 48-76 (248)
435 TIGR02667 moaB_proteo molybden 23.0 2.7E+02 0.0059 24.1 6.2 65 163-228 23-89 (163)
436 PRK09441 cytoplasmic alpha-amy 22.6 67 0.0015 33.4 2.7 33 211-249 73-105 (479)
437 PRK05234 mgsA methylglyoxal sy 22.3 4.8E+02 0.01 22.0 8.2 77 156-246 34-114 (142)
438 smart00852 MoCF_biosynth Proba 22.2 4.1E+02 0.0089 21.9 7.0 58 163-225 19-79 (135)
439 COG2052 Uncharacterized protei 22.1 1.6E+02 0.0036 21.7 3.7 33 204-249 18-50 (89)
440 COG0552 FtsY Signal recognitio 21.5 1.8E+02 0.004 28.5 5.1 80 170-249 189-271 (340)
441 cd06535 CIDE_N_CAD CIDE_N doma 21.0 2.3E+02 0.005 21.2 4.4 50 166-216 26-77 (77)
442 PF13656 RNA_pol_L_2: RNA poly 20.6 1.9E+02 0.004 21.6 4.0 31 397-427 25-55 (77)
443 PLN03013 cysteine synthase 20.2 3.4E+02 0.0073 27.8 7.0 53 120-184 178-230 (429)
No 1
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=1.1e-57 Score=458.31 Aligned_cols=427 Identities=63% Similarity=1.094 Sum_probs=367.4
Q ss_pred ccCchHHhhcCCCCCCCCCCCCHHHHHHHHHHhhhhcCCCCCcccccccCCChHHHHHHHHHHhcccCCCCCCChhhHHH
Q 011057 17 TFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTEL 96 (494)
Q Consensus 17 ~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 96 (494)
.||+..+.+.+++.++|++|.+++++++.+...+.++.+....+++|+++++.|++.+++..+++++.++|..+|...++
T Consensus 2 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~iyld~~a~~~~~~~~tt~~~p~~~~~~~~~l~~~~~np~s~~~~~~l 81 (431)
T TIGR01788 2 AYGSRAVSTGIPKYRMPEEEMPPDAAYQLIHDELSLDGNPRLNLATFVTTWMEPEARKLMDETINKNMIDKDEYPQTAEI 81 (431)
T ss_pred CccccccccCCCcccCCCCCCCHHHHHHHHHHHhhhcCCcceeeeeeeCCCCCHHHHHHHHHHHhcCCCCcccCccHHHH
Confidence 46888888999999999999999999999999888766555556999999999999999999999888888888888899
Q ss_pred HHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCC
Q 011057 97 QNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEV 176 (494)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~ 176 (494)
|+++++|+++++|++... +...+++|+||||||++++++++.++..+.+..|....+..|++|+.+|+++.++++++|+
T Consensus 82 e~~~~~~la~llg~~~~~-~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~ 160 (431)
T TIGR01788 82 ENRCVNMLADLWHAPAKD-AEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDV 160 (431)
T ss_pred HHHHHHHHHHHhCCCCCC-CCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCc
Confidence 999999999999997210 0245667999999999999998765433322333322345899999999999999999999
Q ss_pred eeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccC
Q 011057 177 ELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLY 256 (494)
Q Consensus 177 ~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~ 256 (494)
+++.||++++++.+|+++|+++|+++|.+|+++++||.+|.++|+++|+++|++++...+.++|+|||+||+++.+|+..
T Consensus 161 ~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~ 240 (431)
T TIGR01788 161 ELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVY 240 (431)
T ss_pred eeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhC
Confidence 99999998744689999999999999999999999999999999999999999984333336999999999999888877
Q ss_pred CcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc
Q 011057 257 PELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG 336 (494)
Q Consensus 257 ~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~ 336 (494)
+..+.++...++||+++|+|||+++|.|+|+++++++..+...+...++|+++.....++.++|++..+++.|+.|+.+|
T Consensus 241 ~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG 320 (431)
T TIGR01788 241 PDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLG 320 (431)
T ss_pred CCchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhc
Confidence 87788888889999999999999999999999999875554555556778877555567889998878889999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCC--CCCCHHHHHHHHHhcCceeeccccCCCCCCc
Q 011057 337 FEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDN--KRHDEFEVAELLRRFGWIVPAYTMPADAQHI 414 (494)
Q Consensus 337 ~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~--~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~ 414 (494)
.+|++++.+++.+++++|.++|++.++|+++.+.+..++|+|++.+. .+.+..++.++|.++|+.+..+..|+...+.
T Consensus 321 ~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~ 400 (431)
T TIGR01788 321 REGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDI 400 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCe
Confidence 99999999999999999999999999999998733789999999752 1356789999999999998888888888888
Q ss_pred eEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 415 TVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 415 ~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
.++|++++++++++.+++|+++|+++++++
T Consensus 401 ~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 401 VVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred EEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999876
No 2
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=1e-53 Score=436.63 Aligned_cols=416 Identities=17% Similarity=0.204 Sum_probs=337.8
Q ss_pred ccccccCchHHhhcCCCCCCCCCCCCHHHHHHHHHHhhh----hcCCCCCcccccccCCChH--HHHHHHHHHhcccCCC
Q 011057 13 SIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELM----LDGNPRLNLASFVTTWMEP--ECDKLMMAAINKNYVD 86 (494)
Q Consensus 13 ~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~ 86 (494)
-+.+...+++++..++. ++|++|.+.+++++++.+.+. ...||++ ++|++.++.+ .+.|++..+++.+.+.
T Consensus 85 pv~~~~~p~~l~~~l~~-~~P~~g~~~~~il~~~~~~i~p~~~~~~hP~f--~a~~~~~~~~~~~lgd~l~sa~n~~~~~ 161 (539)
T PLN02590 85 PVLSQVQPGYLRDMLPD-SAPERPESLKELLDDVSKKIMPGITHWQSPSY--FAYYASSTSVAGFLGEMLNAGLSVVGFT 161 (539)
T ss_pred CCCCCCChHHHHHhcCC-CCCCCCCCHHHHHHHHHHHHhccCCcCCCCCe--eEeccCCCcHHHHHHHHHHHhcccccCC
Confidence 35567788999999998 899999999999999988764 3567876 7777766544 4889999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHHHhCCCCCCC--CCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcc
Q 011057 87 MDEYPVTTELQNRCVNIIARLFNAPLEDS--ETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQ 164 (494)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~--~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h 164 (494)
|..+|...++|+++.+||++++|+|..+. ....|++|+|||+||++++.++|+++.......+ ..+..|++|+.+|
T Consensus 162 ~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~--~~~~vvy~S~~aH 239 (539)
T PLN02590 162 WLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTL--LPQLVVYGSDQTH 239 (539)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccC--CCCEEEEecCCch
Confidence 99999999999999999999999986421 1256999999999999999999987654321111 1234778899999
Q ss_pred hHHHHHHHHcCCe---eEEEeccC-CccccCHHHHHHhhhhC------CeEEEEeeCCCCcccccCHHHHHHHHHHhhcc
Q 011057 165 VCWEKFARYFEVE---LKEVKLSE-GYYVMDPVKAVEMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLAEKNKE 234 (494)
Q Consensus 165 ~s~~~~~~~~G~~---v~~v~~~~-~~~~~d~~~L~~~i~~~------t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~ 234 (494)
+|+.|+++++|+. ++.||++. ++++||+++|+++|.++ |.+|+.+.|+|.+|.+|||++|+++|++|
T Consensus 240 ~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~--- 316 (539)
T PLN02590 240 SSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKY--- 316 (539)
T ss_pred HHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHh---
Confidence 9999999999994 89999984 35799999999999753 68899999999999999999999999999
Q ss_pred cCCCceEEEecccccccccccCCcccccc-cCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCC---
Q 011057 235 TGWDTPIHVDAASGGFIAPFLYPELEWDF-RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGAD--- 310 (494)
Q Consensus 235 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~--- 310 (494)
++|+|||||||++++ ..++.+..+ +++.+||+++++|||++.|.+||+++++++..+...+...+.|+...
T Consensus 317 ---g~WlHVDaA~GG~al--~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~ 391 (539)
T PLN02590 317 ---GIWLHVDAAYAGNAC--ICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSK 391 (539)
T ss_pred ---CCeEEEecchhhhhh--cChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccc
Confidence 999999999999865 455554333 67889999999999999999999999999866655555666777431
Q ss_pred ------CCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCC
Q 011057 311 ------QPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNK 384 (494)
Q Consensus 311 ------~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~ 384 (494)
...+++.++|. +..+++|++|+.+|.+|++++++++.+++++|.+.|++.++|+++.++ .+++|||++.+..
T Consensus 392 ~~~~~d~~d~~i~lsRr-~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~-~l~iVcFr~~~~~ 469 (539)
T PLN02590 392 KDTVVNYKDWQISLSRR-FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTR-YFSLVCFRLAPVD 469 (539)
T ss_pred cccCCCccccCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-ceEEEEEEecCCC
Confidence 22345667776 678999999999999999999999999999999999999999999887 7999999997531
Q ss_pred C----CC--HHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCC-hHHHHHHHHHHHHHHHHHhc
Q 011057 385 R----HD--EFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFS-RTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 385 ~----~~--~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t-~~~id~~i~~l~~~~~~l~~ 446 (494)
. .+ ...+.++|.+.|.+ +..++.+.|+.++|+++.+..| +++++.+++.|.+..+++.+
T Consensus 470 ~~~~~~~~ln~~l~~~l~~~G~~---~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~ 535 (539)
T PLN02590 470 GDEDQCNERNRELLAAVNSTGKI---FISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTR 535 (539)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCE---EEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 1 11 34788888888988 5556667889999999965444 56666666666655554443
No 3
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-52 Score=419.47 Aligned_cols=366 Identities=42% Similarity=0.647 Sum_probs=322.9
Q ss_pred CCCCCCCCHHHHHHHHHHhhh-----hcCCCCCcccccccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHH
Q 011057 31 TMPENSIPKEAAYQIINDELM-----LDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIA 105 (494)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la 105 (494)
.+|+.+.+.++++..+..+.. .+++|..+...++++++++.+.+++..++++|..+|+.+|++.++|+++..|++
T Consensus 32 ~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~ 111 (460)
T COG0076 32 MAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLS 111 (460)
T ss_pred cCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHH
Confidence 567778888888888776643 356788777788888888999999999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh-cCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEecc
Q 011057 106 RLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA-EGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS 184 (494)
Q Consensus 106 ~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~-~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~ 184 (494)
+++|++. ...|.+|+||||||++++++++++|.+.+.. .+.....|+||+|..+|+|+.|+++++|++++.++.+
T Consensus 112 ~l~~~~~----~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~ 187 (460)
T COG0076 112 DLLGAPE----EASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTV 187 (460)
T ss_pred HHhCCCC----CCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEec
Confidence 9999974 3679999999999999999999999865533 2333345699999999999999999999999999998
Q ss_pred CCccccCHHHHHHhhhhCCeE--EEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccc
Q 011057 185 EGYYVMDPVKAVEMVDENTIC--VAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWD 262 (494)
Q Consensus 185 ~~~~~~d~~~L~~~i~~~t~~--vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~ 262 (494)
+.+..+|+++|+++|++++.. |+.+.|+|++|.+|||++|+++|+++ ++|+|||+|+|++++||..+...++
T Consensus 188 ~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~------~i~lHVDAA~GG~~~pf~~~~~~~~ 261 (460)
T COG0076 188 PTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEY------GIWLHVDAAFGGFLLPFLEPDGRWD 261 (460)
T ss_pred cCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHc------CCcEEEEccccceeecccCccchhh
Confidence 745899999999999999887 99999999999999999999999999 9999999999999999988888889
Q ss_pred ccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCC-CCCCcccccCcchHHHHHHHHHHHHhcHhHHH
Q 011057 263 FRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGA-DQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYR 341 (494)
Q Consensus 263 ~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~ 341 (494)
++++++||+++|+|||+++|.|||++++|+++.+.+.+.....|+.+ ...++++.++|++..++++|+.++.+|.+||+
T Consensus 262 f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~ 341 (460)
T COG0076 262 FGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYR 341 (460)
T ss_pred cCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHH
Confidence 99999999999999999999999999999997666666666677766 56678899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccC
Q 011057 342 NVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMP 408 (494)
Q Consensus 342 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~ 408 (494)
++.+++.+++++|.++|++.|.|+++.++ ..++|+|++++... ...+..+++...|+.++....+
T Consensus 342 ~l~~~~~~~a~~la~~l~~~~~~e~~~~p-~l~~V~fr~~~~~~-~~~~~~~~~~~~gw~v~~~~~~ 406 (460)
T COG0076 342 KLLDRTLELARYLAEELEKLGDFELVNEP-ELPIVAFRLKDDED-TLADLSERLDRRGWQVPAQLLP 406 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEeecCC-ccceEEEEcCCccc-chhchHHHHHhcCceeecccCC
Confidence 99999999999999999999889999987 79999999944221 2556778888899998776555
No 4
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-51 Score=391.54 Aligned_cols=421 Identities=52% Similarity=0.771 Sum_probs=375.5
Q ss_pred CCccccccCchHHhhcCCCCCCCCCCCCHHHHHHHHHHhhhhcCCCCCcccccccCCChHHHHHHHHHHhcc-cCCCCCC
Q 011057 11 DESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINK-NYVDMDE 89 (494)
Q Consensus 11 ~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~ 89 (494)
+....+...+.+.+..++.+.+|..|.+.+++++.++++.+++++|+.+..+++..+.+++..+++.++++. |+.+.+.
T Consensus 35 ~k~~~~~~~~~~~~~~~~~~~lP~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~~~~~~~l~~~~~~k~N~l~~d~ 114 (491)
T KOG1383|consen 35 VKDQLSTFMSRYDRQKMYFFTLPSKGLPKDAVLELINDELMLDGNPRLGLASGVVYWGEPELDKLIMEAYNKFNPLHPDE 114 (491)
T ss_pred hhhhhhhhhhhhhhccceeecCCCCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecCCcchhhHHHHHHhhcCccCccc
Confidence 334455566777778888889999999999999999999999999999999999999899999999999988 8999999
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH
Q 011057 90 YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK 169 (494)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (494)
+|+...++.++.++++.+++.+++ ..+..|+||||++.++.+..+. +++.+ .++..++++.+...|.++.+
T Consensus 115 fp~~~~~e~~~Vnm~~~L~~~~~~----~~g~~t~G~Ses~l~~~k~~~~----~r~~~-k~I~~p~iv~~~~v~~a~eK 185 (491)
T KOG1383|consen 115 FPVVRKLEAECVNMIANLFNAPSD----SCGCGTVGGSESGLAAKKSYRN----RRKAQ-KGIDKPNIVTPQNVHAAFEK 185 (491)
T ss_pred cchhHHHHHHHHHHHHHHhcCCcc----ccCccccccchHHHHHHHHHHH----HHHhc-cCCCCccccchHHHHHHHHH
Confidence 999999999999999999999953 6788999999996655555444 34333 56778999999999999999
Q ss_pred HHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHH-hhcccCCCceEEEecccc
Q 011057 170 FARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAE-KNKETGWDTPIHVDAASG 248 (494)
Q Consensus 170 ~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~-~~~~~~~~~~l~vD~a~~ 248 (494)
+++.++++++.||++++++.+|+.++.+.++++|++|+.+.|++|+|.++|+++|.++.-+ + ++.+|||++.|
T Consensus 186 ~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w------~ipiHvDa~~G 259 (491)
T KOG1383|consen 186 AARYFEVELREVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIW------DIPIHVDACLG 259 (491)
T ss_pred HHhhEEEEEEeeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHh------CCceeecccCc
Confidence 9999999999999998779999999999999999999999999999999999999999999 8 99999999999
Q ss_pred ccccc-ccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHH
Q 011057 249 GFIAP-FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIA 327 (494)
Q Consensus 249 ~~~~~-~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a 327 (494)
+|+.| ...+..++||+++++-+++.++||++++|.|+|+++.+++.++...+....+|+++.+.+++++|+|++..+++
T Consensus 260 gFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~ 339 (491)
T KOG1383|consen 260 GFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAA 339 (491)
T ss_pred cccccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHH
Confidence 99987 55566689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeecccc
Q 011057 328 QYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTM 407 (494)
Q Consensus 328 ~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~ 407 (494)
+|+++-.+|.+||.+..+++.+.+++|++.|++++++.++++| .++|...+...++..++.+.|.++||.++++..
T Consensus 340 ~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp----~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq~ 415 (491)
T KOG1383|consen 340 QWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKP----LVSFILFGSNDVNIFELSDLLRKKGWILNALQF 415 (491)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCC----cEEEEEccCCccchhhhhHHHHhcCcCccccCC
Confidence 9999999999999999999999999999999999999999774 555555555567889999999999999999999
Q ss_pred CCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhcCcccccccc
Q 011057 408 PADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLPSKVLVPA 455 (494)
Q Consensus 408 ~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~~~~~~~~~~ 455 (494)
|. ..+..++|+.++. +-.|+|+.||+++++++..+++.....+
T Consensus 416 P~-a~Hi~vt~~~~~~----~~A~~~v~Di~~~~~el~~~p~~~~~~~ 458 (491)
T KOG1383|consen 416 PA-AIHICVTRVHARE----DVADRFVADIRKVVEELKSLPESKTHGM 458 (491)
T ss_pred CC-ceEEEEEeeeccH----HHHHHHHHHHHHHHHHHHhCCCcccCcc
Confidence 97 3456667776653 3368999999999999999998876655
No 5
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=5.9e-51 Score=417.09 Aligned_cols=414 Identities=17% Similarity=0.224 Sum_probs=330.1
Q ss_pred ccccccCchHHhhcCCCCCCCCCCCCHHHHHHHHHHhhh----hcCCCCCcccccccCCChH--HHHHHHHHHhcccCCC
Q 011057 13 SIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELM----LDGNPRLNLASFVTTWMEP--ECDKLMMAAINKNYVD 86 (494)
Q Consensus 13 ~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~ 86 (494)
-+.+...++++++.++. .+|+++.+.+++++++.+.+. ..+||++ .+|++.++.+ .+.+++..++|++...
T Consensus 37 pv~~~~~p~~l~~~~~~-~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f--~~~~~~~~~~~~~lad~l~~~~n~~~~~ 113 (490)
T PLN02880 37 PVLSQVQPGYLRELLPD-SAPNQPETLDQVLDDVQAKILPGVTHWQSPNY--FAYYPSNSSVAGFLGEMLSAGLNIVGFS 113 (490)
T ss_pred CCCCCCCHHHHHHhccc-cCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCe--eEeccCCCcHHHHHHHHHHHhhccCCcc
Confidence 36667788999999988 799999999999999988664 2467876 6666555443 4889999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHHHhCCCCCCC--CCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcc
Q 011057 87 MDEYPVTTELQNRCVNIIARLFNAPLEDS--ETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQ 164 (494)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~--~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h 164 (494)
|..+|...++|+++.+|+++++|++.++. ....|++|+|||+||++++.++|+++.......+ ..+..|++|+.+|
T Consensus 114 ~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~--~~~~vv~~S~~aH 191 (490)
T PLN02880 114 WITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNA--LEKLVVYASDQTH 191 (490)
T ss_pred cccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccc--cCCeEEEEcCCch
Confidence 99999999999999999999999986421 0145899999999999999999987654321111 1234778899999
Q ss_pred hHHHHHHHHcCCe---eEEEeccC-CccccCHHHHHHhhhhC------CeEEEEeeCCCCcccccCHHHHHHHHHHhhcc
Q 011057 165 VCWEKFARYFEVE---LKEVKLSE-GYYVMDPVKAVEMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLAEKNKE 234 (494)
Q Consensus 165 ~s~~~~~~~~G~~---v~~v~~~~-~~~~~d~~~L~~~i~~~------t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~ 234 (494)
+|+.|+|+++|++ ++.||+++ ++++||+++|+++|.++ +.+|+.+.|+|.+|.+||+++|+++|+++
T Consensus 192 ~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~--- 268 (490)
T PLN02880 192 SALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSN--- 268 (490)
T ss_pred HHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHc---
Confidence 9999999999996 88999984 35799999999999753 68899999999999999999999999999
Q ss_pred cCCCceEEEecccccccccccCCcccccc-cCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCC--
Q 011057 235 TGWDTPIHVDAASGGFIAPFLYPELEWDF-RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQ-- 311 (494)
Q Consensus 235 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~-- 311 (494)
|+|+|||||||++++ ..++.+..+ +++++||+++++|||+++|.+||+++++++..+...+....+|+....
T Consensus 269 ---~iwlHVDaA~gg~~~--~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~ 343 (490)
T PLN02880 269 ---GMWFHVDAAYAGSAC--ICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQ 343 (490)
T ss_pred ---CCEEEEehhhHHHHH--hCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCcccc
Confidence 999999999999864 445444444 457899999999999999999999999976554444445556654321
Q ss_pred -------CCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCC
Q 011057 312 -------PTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNK 384 (494)
Q Consensus 312 -------~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~ 384 (494)
..+++..+|. +..+++|+.++.+|.+|++++++++.++++++.+.|++.++|+++.++ ..++++|++.+.
T Consensus 344 ~~~~~~~~~~~i~~~rr-~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~-~~~iv~Fr~~~~- 420 (490)
T PLN02880 344 ANSVVDYKDWQIPLGRR-FRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR-IFSLVCFRLVPP- 420 (490)
T ss_pred ccCCCChhccCcCCCCc-ccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-ceEEEEEEEeCC-
Confidence 1223434443 457899999999999999999999999999999999999899999887 689999999753
Q ss_pred CCC-------HHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCCh-HHHHHHHHHHHHHHHHHh
Q 011057 385 RHD-------EFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSR-TLAERLVLDITKVLHELD 445 (494)
Q Consensus 385 ~~~-------~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~-~~id~~i~~l~~~~~~l~ 445 (494)
..+ ...+.++|.+.|.+ +..++...++.++|++++...|. ++++.+++.|+++.+++.
T Consensus 421 ~~~~~~~~~~n~~l~~~l~~~g~~---~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~ 486 (490)
T PLN02880 421 KNNEDNGNKLNHDLLDAVNSSGKI---FISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLL 486 (490)
T ss_pred CCChhhHHHHHHHHHHHHHhCCCE---EEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 112 13577777777877 33444467888999999877775 888888888877776654
No 6
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=7.1e-50 Score=396.29 Aligned_cols=348 Identities=28% Similarity=0.399 Sum_probs=287.1
Q ss_pred chHHhhcCCCCCCCCCCCCHHHHHHHHHHhhhh----cCCCCCcccccccCCChH--HHHHHHHHHhcccCCCCCCChhh
Q 011057 20 SRYVRNSLPRFTMPENSIPKEAAYQIINDELML----DGNPRLNLASFVTTWMEP--ECDKLMMAAINKNYVDMDEYPVT 93 (494)
Q Consensus 20 ~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~ 93 (494)
|+.+++.++. .+|++|.+.+++++++++.+.. ..+|++ .+++++++.+ .+.+++..++|.|...+..+|..
T Consensus 1 P~~l~~~~~~-~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~--~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~ 77 (373)
T PF00282_consen 1 PGELRARLDE-ELPEEGESLEEVLKDLREILAPGVTHWHHPRF--FGFVPGGPSPASILADLLASALNQNGFTWEASPAA 77 (373)
T ss_dssp TTSSGGGCHC-CHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTB--ESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHH
T ss_pred ChhhhhcCcc-ccccCCCCHHHHHHHHHHHhhccCCCCCChhH--hhhccCCccHHHHHHHHHHhhhccccccccccccc
Confidence 4667778887 9999999999999999887652 445765 6777655544 37899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC--CCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCC-CCCCeEEeCCCcchHHHHH
Q 011057 94 TELQNRCVNIIARLFNAPLEDS--ETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKP-FDKPNIVTGANVQVCWEKF 170 (494)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~--~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~-~~~~~vi~~~~~h~s~~~~ 170 (494)
.++|.++.+|+++++|++.++. ....|++|+|||+||+++++++|+++.++.+..|.. ..+++|++|+.+|+|+.++
T Consensus 78 ~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Ka 157 (373)
T PF00282_consen 78 TEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKA 157 (373)
T ss_dssp HHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHH
T ss_pred ccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHh
Confidence 9999999999999999995332 136799999999999999999999988776666654 3456899999999999999
Q ss_pred HHHcCCeeEEEeccCCccccCHHHHHHhhhhC------CeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 011057 171 ARYFEVELKEVKLSEGYYVMDPVKAVEMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVD 244 (494)
Q Consensus 171 ~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~------t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (494)
|+++|++++.||++++ ++||+++|+++|.+. +.+|+++.|+|.+|.+||+++|.++|+++ ++|+|||
T Consensus 158 a~~lGlg~~~I~~~~~-~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~------~~wlHVD 230 (373)
T PF00282_consen 158 ARILGLGVRKIPTDED-GRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKY------NIWLHVD 230 (373)
T ss_dssp HHHTTSEEEEE-BBTT-SSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHC------T-EEEEE
T ss_pred cceeeeEEEEecCCcc-hhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhcccc------ceeeeec
Confidence 9999999999999985 799999999998652 45789999999999999999999999999 9999999
Q ss_pred cccccccccccCCccc-ccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCC---------CCc
Q 011057 245 AASGGFIAPFLYPELE-WDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQ---------PTF 314 (494)
Q Consensus 245 ~a~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~---------~~~ 314 (494)
+|+|+..+ ..+..+ ...+++++||+++++|||+++|.+||++++|++..+...+...+.|+.... ...
T Consensus 231 aA~gg~~~--~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~ 308 (373)
T PF00282_consen 231 AAYGGSAL--LSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDY 308 (373)
T ss_dssp ETTGGGGG--GHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEG
T ss_pred cccccccc--ccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccc
Confidence 99998543 344443 344688999999999999999999999999998877666666788887432 235
Q ss_pred ccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEec
Q 011057 315 TLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLK 381 (494)
Q Consensus 315 ~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~ 381 (494)
++.++| ...++++|..++.+|.+|+++++++..+++++|.+.|++.++|+++.++ ..++|||+++
T Consensus 309 tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~-~~~~vcFr~k 373 (373)
T PF00282_consen 309 TLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEP-DLNIVCFRYK 373 (373)
T ss_dssp SSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTT-SSSEEEEEES
T ss_pred cccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCC-CceEEEEEeC
Confidence 678899 7889999999999999999999999999999999999999999999876 7999999974
No 7
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=9.2e-47 Score=386.48 Aligned_cols=404 Identities=20% Similarity=0.272 Sum_probs=307.1
Q ss_pred HHhhcCCCCCCCCCCCCHHHHHHHHHHhhh----hcCCCCCcccccccCCChH---HHHHHHHHHhcccCCCCCCChhhH
Q 011057 22 YVRNSLPRFTMPENSIPKEAAYQIINDELM----LDGNPRLNLASFVTTWMEP---ECDKLMMAAINKNYVDMDEYPVTT 94 (494)
Q Consensus 22 ~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p---~~~~~~~~~~~~~~~~~~~~~~~~ 94 (494)
.+...++..++|+.+.+.+++++++.+.+. ...||++ .++++...++ .+.+ +..++|+|...|..+|..+
T Consensus 52 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f--~g~~~~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t 128 (522)
T TIGR03799 52 EIEKDFSSAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSF--IGHMTSALPYFMLPLSK-LMVALNQNLVKIETSKAFT 128 (522)
T ss_pred hhhhcccccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCe--EEeccCCCchHHHHHHH-HHHHhcCCcceeecCcchH
Confidence 344566666899999999999998766653 3567765 6666554222 2456 6678999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCC-C-------CCCcceeeecChhHHHHHHHHHHHHHHHHHH------HhcCCC-------CC
Q 011057 95 ELQNRCVNIIARLFNAPLE-D-------SETAVGVGTVGSSEAIMLAGLAFKRKWQNKR------KAEGKP-------FD 153 (494)
Q Consensus 95 ~le~~~~~~la~l~g~~~~-~-------~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~------~~~g~~-------~~ 153 (494)
++|+++.+||+++++..++ + .+...|++|+|||+||+++++++|++..+.. ..+|.. ..
T Consensus 129 ~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~ 208 (522)
T TIGR03799 129 PLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYD 208 (522)
T ss_pred HHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCC
Confidence 9999999999999963211 1 1235699999999999999999998754321 112211 12
Q ss_pred CCeEEeCCCcchHHHHHHHHcCC---eeEEEeccCCccccCHHHHHHhhhh----C--CeEEEEeeCCCCcccccCHHHH
Q 011057 154 KPNIVTGANVQVCWEKFARYFEV---ELKEVKLSEGYYVMDPVKAVEMVDE----N--TICVAAILGSTLNGEFEDVKLL 224 (494)
Q Consensus 154 ~~~vi~~~~~h~s~~~~~~~~G~---~v~~v~~~~~~~~~d~~~L~~~i~~----~--t~~vv~~~~~~~tG~~~~l~~I 224 (494)
+.+|++|+.+|+|+.++++.+|+ +++.||++++ +.||+++|+++|++ + +.+|+.+.++|.+|.+||+++|
T Consensus 209 ~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~-g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eI 287 (522)
T TIGR03799 209 GLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDAN-NRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEM 287 (522)
T ss_pred ceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCC-CcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHH
Confidence 45799999999999999999999 6899999875 79999999999863 3 4556677999999999999999
Q ss_pred HHHHHHhhcccCCCceEEEecccccccccccCCcccccc-cCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccc
Q 011057 225 NDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF-RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFH 303 (494)
Q Consensus 225 ~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~ 303 (494)
+++|+++ ++|+|||+||+++.+ ..++.+..+ +++++||+++++|||+++|.|+|+++++++..+ ..+...
T Consensus 288 a~i~~~~------g~~lHVDaA~gg~~~--~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~-~~~~~~ 358 (522)
T TIGR03799 288 ADIAQEL------GCHFHVDAAWGGATL--LSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALM-SAIEHH 358 (522)
T ss_pred HHHHHHc------CCeEEEEchhhhHHH--hCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHH-HHhccC
Confidence 9999999 999999999998654 344444444 356899999999999999999999999987543 344455
Q ss_pred cCCCCC----CCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEE
Q 011057 304 INYLGA----DQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFS 379 (494)
Q Consensus 304 ~~y~~~----~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~ 379 (494)
+.|+.. .....+++++|++. ++++|++++.+|.+|+++++++..+++++|.+.|++.++|+++.++ ..++|+|+
T Consensus 359 ~~Yl~~~~~~d~~~~~legsR~~~-al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p-~l~iv~Fr 436 (522)
T TIGR03799 359 AEYILRKGSKDLGSHTLEGSRPGM-AMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEP-ELCLLTYR 436 (522)
T ss_pred cchhcCCCCCccccceeecCcchH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCC-CccEEEEE
Confidence 667521 22345678999755 5789999999999999999999999999999999999999999876 68999999
Q ss_pred ecCCCC------------------CC--HHHHHHHHHhcCceeecccc--CCCCC--CceEEEEEeccCCChHHHHHHHH
Q 011057 380 LKDNKR------------------HD--EFEVAELLRRFGWIVPAYTM--PADAQ--HITVLRVVIREDFSRTLAERLVL 435 (494)
Q Consensus 380 ~~~~~~------------------~~--~~~l~~~L~~~Gi~v~~~~~--~~~~~--~~~~lRvs~~~~~t~~~id~~i~ 435 (494)
+.+... .| ...+.++|.+.|....+.+. +..+. +..++|+++.+..|.+ +
T Consensus 437 ~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~------~ 510 (522)
T TIGR03799 437 YVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTH------E 510 (522)
T ss_pred EeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCH------H
Confidence 865310 01 14677778888987533221 22222 3478999997766664 5
Q ss_pred HHHHHHHHHhc
Q 011057 436 DITKVLHELDS 446 (494)
Q Consensus 436 ~l~~~~~~l~~ 446 (494)
+|+.++++.++
T Consensus 511 ~i~~~l~~~~~ 521 (522)
T TIGR03799 511 ILQDILDEQRE 521 (522)
T ss_pred HHHHHHHHhhc
Confidence 66666665543
No 8
>PLN02263 serine decarboxylase
Probab=100.00 E-value=4.3e-45 Score=363.66 Aligned_cols=356 Identities=19% Similarity=0.213 Sum_probs=283.7
Q ss_pred HHHHHHHHHHhhhhcCCCCCcccccccCC--C-hHHHHHHHHHHhcccCCCCCCCh---hhHHHHHHHHHHHHHHhCCCC
Q 011057 39 KEAAYQIINDELMLDGNPRLNLASFVTTW--M-EPECDKLMMAAINKNYVDMDEYP---VTTELQNRCVNIIARLFNAPL 112 (494)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~p~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~ 112 (494)
.+++++.+.+.+... ... +.+| +.. . ...+.+++...+++-+..|..++ ...++|+++.+|+++++|+++
T Consensus 75 ~~~~l~~~~~~~~~~-~~~--~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p~ 150 (470)
T PLN02263 75 MASVLARYRKTLVER-TKH--HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEK 150 (470)
T ss_pred HHHHHHHHHHHHHhc-ccc--eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCCC
Confidence 356666666665422 121 3444 222 1 24577777666665444455555 799999999999999999975
Q ss_pred CCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCH
Q 011057 113 EDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDP 192 (494)
Q Consensus 113 ~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~ 192 (494)
+ ..+|++|+||||||+++++++|+.+. +..+++|+.+|+|+.|+++++|++++.||++++ ++||+
T Consensus 151 ~---~~~G~vtsGGTEaNL~Al~aARe~~~-----------~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~-g~mD~ 215 (470)
T PLN02263 151 N---EYWGYITNCGTEGNLHGILVGREVFP-----------DGILYASRESHYSVFKAARMYRMECVKVDTLVS-GEIDC 215 (470)
T ss_pred C---CCeEEEeCcHHHHHHHHHHHHHhhcC-----------CcEEEEcCCccHHHHHHHHhcCCcceEeccCCC-CcCcH
Confidence 2 25799999999999999999988531 247899999999999999999999999999875 89999
Q ss_pred HHHHHhhhhC---CeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCc-----eEEEecccccccccccCCccccccc
Q 011057 193 VKAVEMVDEN---TICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDT-----PIHVDAASGGFIAPFLYPELEWDFR 264 (494)
Q Consensus 193 ~~L~~~i~~~---t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~-----~l~vD~a~~~~~~~~~~~~~~~~~~ 264 (494)
++|+++|.++ +.+|+++.|+|++|.+|||++|+++|+++ |+ |+|||||+||+++||......+++.
T Consensus 216 ~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~------g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~ 289 (470)
T PLN02263 216 ADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEEC------GFSQDRFYIHCDGALFGLMMPFVKRAPKVTFK 289 (470)
T ss_pred HHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHc------CCccCCeeEEEeccchhhHhhhcccccccCCC
Confidence 9999999765 56788999999999999999999999999 75 9999999999988876553344554
Q ss_pred CCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHH
Q 011057 265 LPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVM 344 (494)
Q Consensus 265 ~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~ 344 (494)
. .+||+++|+|||+++|.+||++++|++. + ..+...+.|+.... .++.++|++..++++|+.|+.+|.+|+++++
T Consensus 290 ~-~vDSIsvD~HK~l~~P~~cgvll~R~~~-~-~~~~~~~~Yl~~~d--~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i 364 (470)
T PLN02263 290 K-PIGSVSVSGHKFVGCPMPCGVQITRMEH-I-NVLSSNVEYLASRD--ATIMGSRNGHAPIFLWYTLNRKGYRGFQKEV 364 (470)
T ss_pred c-CccEEEECCccccCCCcCEEEEEEehhh-H-hhhccChHhhCCCC--CCcCCCCCcHHHHHHHHHHHHhCHHHHHHHH
Confidence 3 4999999999999999999999999643 2 44455677887654 3567999888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccC
Q 011057 345 ENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIRED 424 (494)
Q Consensus 345 ~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~ 424 (494)
+++.++++++.++|++.+ ++++..+ ..++|+|+.+. . + +..+||.+... ...++++++++
T Consensus 365 ~~~~~~A~~l~~~l~~~g-~~~~~~p-~s~~V~f~~p~-----~-~----~~~~gW~L~~~--------~~~~Hivvmph 424 (470)
T PLN02263 365 QKCLRNAHYLKDRLREAG-ISAMLNE-LSSTVVFERPK-----D-E----EFVRRWQLACQ--------GNIAHVVVMPS 424 (470)
T ss_pred HHHHHHHHHHHHHHHhCC-CeEEeCC-CceEEEEecCc-----h-H----HhhcceEEccC--------CCcEEEEEcCC
Confidence 999999999999999996 7777665 57788887432 1 1 23578876431 12499999999
Q ss_pred CChHHHHHHHHHHHHHHHHH
Q 011057 425 FSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 425 ~t~~~id~~i~~l~~~~~~l 444 (494)
++.+.+|.|+++|++.....
T Consensus 425 v~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 425 VTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred CCHHHHHHHHHHHHHHHhhh
Confidence 99999999999999887644
No 9
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=3.2e-43 Score=349.18 Aligned_cols=327 Identities=18% Similarity=0.274 Sum_probs=268.0
Q ss_pred HHHHHHHHHHhcccCCCCCCCh----hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 011057 70 PECDKLMMAAINKNYVDMDEYP----VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKR 145 (494)
Q Consensus 70 p~~~~~~~~~~~~~~~~~~~~~----~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~ 145 (494)
..+.+++. +..+|.+++...+ ...++|+++++|+++++|.+++ ..+|++|+||||+|+++++++++..
T Consensus 37 ~~~~~~~~-~~~~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~---~~~G~~TsGgTean~~a~~~ar~~~---- 108 (380)
T PRK02769 37 SALKRFFS-FSINNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFN---ESWGYITNGGTEGNLYGCYLARELF---- 108 (380)
T ss_pred HHHHHHHH-hhhccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCC---CCCEEEecChHHHHHHHHHHHHHhC----
Confidence 34445544 4444555655544 4789999999999999999752 2468999999999999988887531
Q ss_pred HhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhC---CeEEEEeeCCCCcccccCHH
Q 011057 146 KAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDEN---TICVAAILGSTLNGEFEDVK 222 (494)
Q Consensus 146 ~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~---t~~vv~~~~~~~tG~~~~l~ 222 (494)
.+++|++|+.+|+|+.++++.+|++.+.|+++++ +.+|+++|+++|+++ |.+|++++++|.+|.++|++
T Consensus 109 -------~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~-g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~ 180 (380)
T PRK02769 109 -------PDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPN-GEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIK 180 (380)
T ss_pred -------CCcEEEeCCCceehHHHHHHHcCCCCceeccCCC-CcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHH
Confidence 1258999999999999999999999999998764 789999999999987 89999999999999999999
Q ss_pred HHHHHHHHhhcccCCC---ceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccc
Q 011057 223 LLNDLLAEKNKETGWD---TPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEE 299 (494)
Q Consensus 223 ~I~~la~~~~~~~~~~---~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~ 299 (494)
+|+++|+++ + +|+|||+||+++.+|+.......++.. ++|++++|+|||+++|.|+|+++++++. + ..
T Consensus 181 ~I~~i~~~~------g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~-~-~~ 251 (380)
T PRK02769 181 EIQEILKKI------GIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKY-V-ER 251 (380)
T ss_pred HHHHHHHHh------CCCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhh-h-hh
Confidence 999999999 7 699999999999888765544455544 8999999999999999999999999753 2 22
Q ss_pred cccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEE
Q 011057 300 LIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFS 379 (494)
Q Consensus 300 ~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~ 379 (494)
+.....|+... ..++.|||++..++++|++|+.+|.+|++++.+++.++++++.++|++.+ ++++.+| ..++|+|.
T Consensus 252 ~~~~~~yl~~~--d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g-~~~~~~p-~~~~v~f~ 327 (380)
T PRK02769 252 ISVDVDYIGSR--DQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANG-IPAWRNP-NSITVVFP 327 (380)
T ss_pred cccCccccCCC--CCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCC-CceEEEEc
Confidence 33456676543 34678999999999999999999999999999999999999999999875 8988876 68889987
Q ss_pred ecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 380 LKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 380 ~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
.+. .++. +||.+... ...+|++++++++++.+|.|+++|...+...
T Consensus 328 ~~~------~~~~-----~~w~l~~~--------~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~ 373 (380)
T PRK02769 328 CPS------ERIW-----KKWHLATS--------GNQAHIITMPHHNKQQIDSLIDELIFDLKNP 373 (380)
T ss_pred CCC------HHHH-----hCeeEccc--------CCEEEEEECCCCCHHHHHHHHHHHHHHHhcc
Confidence 532 1222 67876432 1369999999999999999999998877643
No 10
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-44 Score=340.22 Aligned_cols=413 Identities=20% Similarity=0.250 Sum_probs=340.5
Q ss_pred cccccCchHHhhcCCCCCCCCCCCCHHHHHHHHHHhhh----hcCCCCCcccccccCCC-hH-HHHHHHHHHhcccCCCC
Q 011057 14 IHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELM----LDGNPRLNLASFVTTWM-EP-ECDKLMMAAINKNYVDM 87 (494)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~p-~~~~~~~~~~~~~~~~~ 87 (494)
+.|-..||+++..+|. ..|+.+.+.+++++++++.++ .+.||++ .+|.++.. -| -+.+++...+..-++.|
T Consensus 29 v~P~v~PGYl~~llP~-~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~f--hAyfpa~~s~~siladmLs~~i~~vGFtW 105 (511)
T KOG0628|consen 29 VLPDVKPGYLRDLLPS-KAPEKPESWEDILGDLEKIIMPGITHWQHPHF--HAYFPAGNSYPSILADMLSGGIGCVGFTW 105 (511)
T ss_pred CCCCCCcchhhhhCCC-CCCCChhhHHHHHHHHHHHccCCCcccCCCce--eeEccCccchHHHHHHHHhccccccccee
Confidence 6778899999999999 999999999999999999986 3667876 55555432 24 47788888888878899
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCCCC----CCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCC------CCCeE
Q 011057 88 DEYPVTTELQNRCVNIIARLFNAPLEDS----ETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPF------DKPNI 157 (494)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~~----~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~------~~~~v 157 (494)
.++|..++||..+.+||++++++|..|. ....|++-.+++|+++.+++++|.....+.+..-... .+-.+
T Consensus 106 ~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~ 185 (511)
T KOG0628|consen 106 ASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVA 185 (511)
T ss_pred ecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheE
Confidence 9999999999999999999999998653 3467888888999999999999987766543221111 12267
Q ss_pred EeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhC------CeEEEEeeCCCCcccccCHHHHHHHHHHh
Q 011057 158 VTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLAEK 231 (494)
Q Consensus 158 i~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~------t~~vv~~~~~~~tG~~~~l~~I~~la~~~ 231 (494)
++|+.+|.+++++|...|++++.++.++ ++.|+.+.|+++|+++ |..|+++.|+|.+..+|+|.+|..+|+++
T Consensus 186 Y~SDqahssveka~~i~~VklR~l~td~-n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~ 264 (511)
T KOG0628|consen 186 YCSDQAHSSVEKACLIAGVKLRALPTDE-NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCREE 264 (511)
T ss_pred EecCcccchHHHhHhhcceeEEEeeccc-CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhhc
Confidence 8999999999999999999999999998 4899999999999875 67899999999999999999999999999
Q ss_pred hcccCCCceEEEecccccccccccCCcccccc-cCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCC
Q 011057 232 NKETGWDTPIHVDAASGGFIAPFLYPELEWDF-RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGAD 310 (494)
Q Consensus 232 ~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~ 310 (494)
++|||||+||+|.+ +.+|+++..+ +++.+||++++.|||++....|+.+|+++...+...+...+.|+.+.
T Consensus 265 ------glWLHVDAAYAGsa--~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~ 336 (511)
T KOG0628|consen 265 ------GLWLHVDAAYAGSA--FICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHA 336 (511)
T ss_pred ------CEEEEeehhhcccc--ccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcch
Confidence 99999999999874 4788887555 68899999999999999999999999999977777776667777553
Q ss_pred CC-------CcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCC
Q 011057 311 QP-------TFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDN 383 (494)
Q Consensus 311 ~~-------~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (494)
.. .+.+.-.| .+..+++|..++.+|.+++++++++..++++.+.+.+.+.+.||+..+. ..++|||+.++.
T Consensus 337 ~~~~~~Dyrhwqipl~r-RfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~-~lgLvcFRlk~~ 414 (511)
T KOG0628|consen 337 YQGSAPDYRHWQIPLGR-RFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKR-ILGLVCFRLKGD 414 (511)
T ss_pred hhccCCCcccccccccc-chhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeccc-ccceeEEeecCC
Confidence 21 12222333 2677999999999999999999999999999999999999999999887 799999999875
Q ss_pred CCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhcCccc
Q 011057 384 KRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLPSK 450 (494)
Q Consensus 384 ~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~~~~~ 450 (494)
+.....+.+++...|-+ ...|....|+.++|+++....|++ +++++.++.|.+..+.
T Consensus 415 -N~~ne~Ll~~in~~g~i---~l~~~~l~gk~vlRf~V~s~~t~~------~di~~a~~~I~~~a~~ 471 (511)
T KOG0628|consen 415 -NEINEALLNRLNSSGRI---HLVPASLHGKFVLRFAVCSPLTNE------SDIDEAWKIIFEAADE 471 (511)
T ss_pred -cHHHHHHHHHHHhcCcE---EEEEeeecceEEEEEEecCCCCcH------HHHHHHHHHHHHHHHH
Confidence 33356899999998877 455666788999999998877764 5555555555555444
No 11
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=3.5e-43 Score=346.05 Aligned_cols=325 Identities=20% Similarity=0.234 Sum_probs=266.3
Q ss_pred HHHHHHHHHHhcccCCCCCCCh----hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 011057 70 PECDKLMMAAINKNYVDMDEYP----VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKR 145 (494)
Q Consensus 70 p~~~~~~~~~~~~~~~~~~~~~----~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~ 145 (494)
+...+.+..++.+|.+++.... ...++|+++++|+++++|.+++ ..+|+||+||||||++++++++...
T Consensus 37 ~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~---~~~G~fTsGGTEaNl~al~~ar~~~---- 109 (374)
T PLN03032 37 YGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKD---EYWGYITTCGTEGNLHGILVGREVF---- 109 (374)
T ss_pred hHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCc---cCCEEEeCchHHHHHHHHHHHHHhC----
Confidence 3456666677766666654433 6899999999999999999862 2468999999999999999887531
Q ss_pred HhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh---CCeEEEEeeCCCCcccccCHH
Q 011057 146 KAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE---NTICVAAILGSTLNGEFEDVK 222 (494)
Q Consensus 146 ~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~t~~vv~~~~~~~tG~~~~l~ 222 (494)
.+..|++|..+|+|+.++++.+|++++.||++++ +.+|+++|+++|++ +|.+|+++.+||.+|.+||++
T Consensus 110 -------~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~-g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~ 181 (374)
T PLN03032 110 -------PDGILYASRESHYSVFKAARMYRMEAVKVPTLPS-GEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLD 181 (374)
T ss_pred -------CCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCC-CcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHH
Confidence 1147999999999999999999999999999875 79999999999987 478899999999999999999
Q ss_pred HHHHHHHHhhcccCCC-----ceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcc
Q 011057 223 LLNDLLAEKNKETGWD-----TPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP 297 (494)
Q Consensus 223 ~I~~la~~~~~~~~~~-----~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~ 297 (494)
+|+++|+++ + +|+|||+|++++.+|+.......++. .++||+++|+|||+++|.|+|++++++.. +
T Consensus 182 eI~~i~~~~------g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~-~- 252 (374)
T PLN03032 182 RILRILKEL------GYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKH-V- 252 (374)
T ss_pred HHHHHHHHh------CCCCCCeeEEEEccchhhhhhccCCCcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchh-h-
Confidence 999999999 6 59999999999888775433333443 36999999999999999999999999743 3
Q ss_pred cccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEE
Q 011057 298 EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVA 377 (494)
Q Consensus 298 ~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~ 377 (494)
..+....+|+...+ .++.|+|++..++++|++|+.+|.+|++++++++.+++++|.++|++.+ ++++..| ..++|+
T Consensus 253 ~~~~~~~~Yl~~~d--~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~p-~~~~V~ 328 (374)
T PLN03032 253 KALSQNVEYLNSRD--ATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAG-LTCRLNE-LSSTVV 328 (374)
T ss_pred HhhccCCcccCCCC--CcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEECC-CceEEE
Confidence 33455678887653 5678999999999999999999999999999999999999999999986 8877766 577888
Q ss_pred EEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 378 FSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 378 f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
|+.+. .. .+. +||.+++. ...+|++++++++++.+|.|+++|++.
T Consensus 329 f~~~~-----~~----~~~-~~w~l~~~--------~~~~hi~vm~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 329 FERPM-----DE----AFI-KKWQLACE--------GDIAHVVVMPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred EcCCC-----cH----hHh-heeeeccc--------CCEEEEEECCCCCHHHHHHHHHHHhcc
Confidence 88532 11 122 67876431 136999999999999999999998763
No 12
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=4.8e-41 Score=346.47 Aligned_cols=355 Identities=16% Similarity=0.218 Sum_probs=269.8
Q ss_pred CCCCCCCCHHHHHHHHHHhhhh----cCCC-CCcccccccC-CChH-HHHHHHHHHhcccCCCCCCChhhHHHHHHHHHH
Q 011057 31 TMPENSIPKEAAYQIINDELML----DGNP-RLNLASFVTT-WMEP-ECDKLMMAAINKNYVDMDEYPVTTELQNRCVNI 103 (494)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~-~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~ 103 (494)
.+.+...+.+++++.+.+.+.. ..+| ++ .++++. +..| .+.+++..++|.|...|+.+|.++.+|+++.+|
T Consensus 54 ~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry--~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~ 131 (608)
T TIGR03811 54 SFTKTVNNMKDVLDELSSRLRTESVPWHSAGRY--WGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKE 131 (608)
T ss_pred ccccCccCHHHHHHHHHHHHhcCCCCCCCccce--EEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHH
Confidence 3445555688888888876642 3456 54 444443 3344 477999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHH-H---HH----------------------------------
Q 011057 104 IARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQ-N---KR---------------------------------- 145 (494)
Q Consensus 104 la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~-~---~~---------------------------------- 145 (494)
+++++|++. .+|++|+|||+||+.+++++|+.+. + +.
T Consensus 132 la~l~G~~~-----~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~ 206 (608)
T TIGR03811 132 FATLMGYKN-----GWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQID 206 (608)
T ss_pred HHHHhCCCC-----CCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchh
Confidence 999999975 5799999999999999999998531 1 00
Q ss_pred --Hh----cCCCCCCC-eEEeCCCcchHHHHHHHHcCCe---eEEEeccCCccccCHHHHHHhhhhC------CeEEEEe
Q 011057 146 --KA----EGKPFDKP-NIVTGANVQVCWEKFARYFEVE---LKEVKLSEGYYVMDPVKAVEMVDEN------TICVAAI 209 (494)
Q Consensus 146 --~~----~g~~~~~~-~vi~~~~~h~s~~~~~~~~G~~---v~~v~~~~~~~~~d~~~L~~~i~~~------t~~vv~~ 209 (494)
+. .|....+. ++++|...|+|+.|++.++|++ ++.||+|++ ++||+++|++.|.+. +.+||.+
T Consensus 207 ~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~-~rmd~~~L~~~I~~~~~~g~p~~~VVat 285 (608)
T TIGR03811 207 EIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSN-YRMDINELEKIIRKLAAEKTPILGVVGV 285 (608)
T ss_pred hhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCC-CcCCHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 00 00111112 6889999999999999999995 899999875 899999999999752 5679999
Q ss_pred eCCCCcccccCHHHHHHHHHHhhcccCCCc--eEEEecccccccccccCC------------------------------
Q 011057 210 LGSTLNGEFEDVKLLNDLLAEKNKETGWDT--PIHVDAASGGFIAPFLYP------------------------------ 257 (494)
Q Consensus 210 ~~~~~tG~~~~l~~I~~la~~~~~~~~~~~--~l~vD~a~~~~~~~~~~~------------------------------ 257 (494)
.|+|.+|.+|||++|+++|++.. ++ ++ |+||||||||+..+.+.+
T Consensus 286 aGTT~~GaiDpl~eI~~l~~~~~-~~--gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~ 362 (608)
T TIGR03811 286 VGSTEEGAVDGIDKIVALRNKLM-KE--GIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISR 362 (608)
T ss_pred cCCcCCcccCCHHHHHHHHHHHH-Hc--CCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccH
Confidence 99999999999999999994421 11 65 799999999965221111
Q ss_pred cccccc-cCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCC-------CCcccccCcchHHHHHHH
Q 011057 258 ELEWDF-RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQ-------PTFTLNFSKGSSQVIAQY 329 (494)
Q Consensus 258 ~~~~~~-~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~-------~~~~~~~s~~~~~~~a~~ 329 (494)
+.+..+ +++++||+++++|||++.|++||++++|++. +...+...+.|+.... ..+++.++|++..++++|
T Consensus 363 ~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~-~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW 441 (608)
T TIGR03811 363 EVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIR-MRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVW 441 (608)
T ss_pred hHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHH-HHHHHhcCcchhccccccCcccccccceecCCccHHHHHHH
Confidence 111122 4778999999999999999999999999985 4455556677774311 235678999888899999
Q ss_pred HHHHHh--cHhHHHHHHHHHHHHHHHHHHHHhhC------CCeEE--eecCCCccEEEEEecCCCCCC---HHHHHHHHH
Q 011057 330 YQLIRL--GFEGYRNVMENCHENAMVLKEGLEKT------GRFNI--VSKDEGVPLVAFSLKDNKRHD---EFEVAELLR 396 (494)
Q Consensus 330 ~al~~l--~~~g~~~~~~~~~~~a~~l~~~L~~~------~~~~~--~~~~~~~~~v~f~~~~~~~~~---~~~l~~~L~ 396 (494)
++++.+ |.+||.++++++.++++++.+.|+++ +.|++ +.++ .+++|+|++.+...-+ ..++.+++.
T Consensus 442 ~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~p-dlniV~Fr~~~~g~~~l~~~n~ln~~i~ 520 (608)
T TIGR03811 442 AAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKP-DFNMVDYVFNEKGNDDLVKMNKLNHAFY 520 (608)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCC-CcceEEEEEecCCCccHHHHHHHHHHHH
Confidence 999998 99999999999999999999999984 45676 5555 7999999986532211 344555555
Q ss_pred hc
Q 011057 397 RF 398 (494)
Q Consensus 397 ~~ 398 (494)
++
T Consensus 521 ~~ 522 (608)
T TIGR03811 521 DY 522 (608)
T ss_pred Hh
Confidence 44
No 13
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=4e-40 Score=349.71 Aligned_cols=424 Identities=13% Similarity=0.081 Sum_probs=313.0
Q ss_pred CHHHHHHHHHHhhhhcCCC-CCcccccccCCChHHHHHHHHHHhcc----cCCCCC-CChhhHHHHHHHHHHHHHHhCCC
Q 011057 38 PKEAAYQIINDELMLDGNP-RLNLASFVTTWMEPECDKLMMAAINK----NYVDMD-EYPVTTELQNRCVNIIARLFNAP 111 (494)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~-~~~~~~~le~~~~~~la~l~g~~ 111 (494)
++.+++++++++...+-.- ...++.+..+...+.+.+.+...+.+ .+..+. .++++.+++.++.+||++++|++
T Consensus 467 sE~e~~r~~~~L~~kn~~~~~~fi~lGsctmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGmd 546 (939)
T TIGR00461 467 SETEMLRYLHRLESKDLALNNSMIPLGSCTMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGFD 546 (939)
T ss_pred CHHHHHHHHHHHHhcCCCccccCCCCccCCCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCCC
Confidence 8889999998876544221 11122233333344455555444433 233333 56789999999999999999998
Q ss_pred CCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccC
Q 011057 112 LEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMD 191 (494)
Q Consensus 112 ~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d 191 (494)
. .++..++|++++..+++++|..+..+ |. ..+.+|++|..+|.+....++..|++++.|+++++ +.+|
T Consensus 547 ~------~Sl~p~aGA~gE~agL~aiR~y~~~r----ge-~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~-G~iD 614 (939)
T TIGR00461 547 A------ISLQPNSGAQGEYAGLRVIRSYHESR----GE-NHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQD-GNID 614 (939)
T ss_pred C------cccCCchHHHHHHHHHHHHHHHHHhc----CC-CCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCC-CCcC
Confidence 4 37778899999998888887643211 21 12457999999999998989999999999999864 7999
Q ss_pred HHHHHHhhhh---CCeEEEEeeCCCCcccccC-HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCC
Q 011057 192 PVKAVEMVDE---NTICVAAILGSTLNGEFED-VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPL 267 (494)
Q Consensus 192 ~~~L~~~i~~---~t~~vv~~~~~~~tG~~~~-l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 267 (494)
+++|++++++ ++++|++++++| +|.++| +++|+++||++ |.+++||+|+.........+ +..+
T Consensus 615 le~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~------G~~v~VDgAq~~al~~l~~P------g~~G 681 (939)
T TIGR00461 615 LVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSF------GGQVYLDGANMNAQVGLTSP------GDLG 681 (939)
T ss_pred HHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHc------CCEEEEEecChhhCCCCCCc------cccC
Confidence 9999999984 789999999999 699977 99999999999 99999999996643322221 2348
Q ss_pred ceEEEEcCcccCC-----cCCceEEEEEeCCCCccccccccc-----CCCCCCC-CCccc-ccCcchHHHHHHHHHHHHh
Q 011057 268 VKSINVSGHKYGL-----VYAGIGWVIWRNKEDLPEELIFHI-----NYLGADQ-PTFTL-NFSKGSSQVIAQYYQLIRL 335 (494)
Q Consensus 268 ~D~~~~~~hK~l~-----~p~g~G~~~~~~~~~~~~~~~~~~-----~y~~~~~-~~~~~-~~s~~~~~~~a~~~al~~l 335 (494)
+|+++++.||+++ +|+|+|++.+++. +...++-.. +..+..+ ...+. .++.++...+..|++++.+
T Consensus 682 aDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~l 759 (939)
T TIGR00461 682 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMM 759 (939)
T ss_pred CCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHH
Confidence 9999999999988 5566699999863 333332211 0000010 01111 1455566778999999999
Q ss_pred cHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC---CccEEEEEecCC---CCCCHHHHHHHHHhcCceeeccccCC
Q 011057 336 GFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE---GVPLVAFSLKDN---KRHDEFEVAELLRRFGWIVPAYTMPA 409 (494)
Q Consensus 336 ~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~~v~f~~~~~---~~~~~~~l~~~L~~~Gi~v~~~~~~~ 409 (494)
|.+|+++..+....+++|+.++|++. ++++.+.. ...-++|++.+. .+.+..+++++|.++|++.++..+|
T Consensus 760 G~~GL~~~a~~ailnAnYl~~rL~~~--~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~p- 836 (939)
T TIGR00461 760 GNEGLPKASVVAILNANYMATRLKDH--YPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFP- 836 (939)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhcc--CcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCc-
Confidence 99999999999999999999999873 67776531 244577776531 2467899999999999997664444
Q ss_pred CCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhcCccccccccccccCccCccccc----cccc-------------
Q 011057 410 DAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLPSKVLVPASEQNGRNGKKTEI----ETQR------------- 472 (494)
Q Consensus 410 ~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~------------- 472 (494)
..+.-++|++ +..+++|+|+|+++|..+.++++++.+..++...+.++++||+... .|.+
T Consensus 837 -v~g~lmiepT--E~eskeelD~f~~al~~I~~e~~~~~~g~~~~~~~~l~~ap~~~~~~~~~~w~~~y~r~~a~~p~~~ 913 (939)
T TIGR00461 837 -VPGTLMVEPT--ESESLEELDRFCDAMIAIKEEINALVAGQPKGQDNPLKNAPHSLQSLITSEWWHPYSREEAAYPAPF 913 (939)
T ss_pred -cCCeEEEEee--ccCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchHhhCCCCHHHhhcCCCCCCcChhhccCCCcc
Confidence 3344456665 4679999999999999999999998888777777788888887663 1221
Q ss_pred -ccchhhhhhhcc-cccccCCCCC
Q 011057 473 -EVTTYWRKFVSE-RKANNKNKIC 494 (494)
Q Consensus 473 -~~~~~~~~~~~~-~~~~~~~~~~ 494 (494)
...||||+|+|+ ++|||+|+||
T Consensus 914 ~~~~k~wp~v~r~d~~~gd~nl~c 937 (939)
T TIGR00461 914 LRYNKFWPTVARLDDTYGDRNLIC 937 (939)
T ss_pred cccCCcCCCcCCcccccccccccc
Confidence 237999999999 9999999999
No 14
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=9.9e-39 Score=345.48 Aligned_cols=425 Identities=13% Similarity=0.103 Sum_probs=305.7
Q ss_pred CCCHHHHHHHHHHhhhhcCC---CCCcccccccCCChHHHHHHHHHHhcc----cCCCC-CCChhhHHHHHHHHHHHHHH
Q 011057 36 SIPKEAAYQIINDELMLDGN---PRLNLASFVTTWMEPECDKLMMAAINK----NYVDM-DEYPVTTELQNRCVNIIARL 107 (494)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~-~~~~~~~~le~~~~~~la~l 107 (494)
-.++.++++.++++...+-. ..+.+++ ++....|.+.+.+. .+.+ .+..+ +.++++.+++.++.+|++++
T Consensus 477 ~~sE~e~~r~~~~l~~kn~~~~~~~i~lGs-ct~~~~p~~~~~~~-~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~el 554 (954)
T PRK05367 477 YHSETEMMRYLRRLEDKDLALDRSMIPLGS-CTMKLNAAAEMIPI-TWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEI 554 (954)
T ss_pred CCCHHHHHHHHHHHHhcCcCcccceeeCCc-CCCcCCHHHHHHHH-hCccccccCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 34888999999988765432 2233455 77777776555443 2222 12233 44568999999999999999
Q ss_pred hCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCc
Q 011057 108 FNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGY 187 (494)
Q Consensus 108 ~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~ 187 (494)
+|++. ..+..+||+++++.++++++..... .|. ..+.+|++|+.+|.+..+.+.++|++++.++++.+
T Consensus 555 tG~d~------~sl~~~~ga~ge~agL~a~r~~~~~----~G~-~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~- 622 (954)
T PRK05367 555 TGYDA------VSLQPNAGAQGEYAGLLAIRAYHES----RGE-GHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDEN- 622 (954)
T ss_pred HCCCC------EEECccHHHHHHHHHHHHHHHHhhc----cCC-CCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCC-
Confidence 99974 2455668889998888766542211 111 12357999999999999999999999999999864
Q ss_pred cccCHHHHHHhhhh---CCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc
Q 011057 188 YVMDPVKAVEMVDE---NTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR 264 (494)
Q Consensus 188 ~~~d~~~L~~~i~~---~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~ 264 (494)
+.+|+++|++++++ ++.+|++++|++..+..+|+++|+++||++ |+|+|||+|+..+..++..+ +
T Consensus 623 G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~------G~~v~VDgA~~~al~~l~~p------g 690 (954)
T PRK05367 623 GNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEH------GGQVYLDGANMNAQVGLARP------G 690 (954)
T ss_pred CCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHc------CCEEEEECcChhhccCCCCh------h
Confidence 79999999999976 367888999988844458999999999999 99999999998665443322 2
Q ss_pred CCCceEEEEcCcccCCcCCc-----eEEEEEeCCCCcccccccccCCCCCCCC-CcccccCc--chHHHHHHHHHHHHhc
Q 011057 265 LPLVKSINVSGHKYGLVYAG-----IGWVIWRNKEDLPEELIFHINYLGADQP-TFTLNFSK--GSSQVIAQYYQLIRLG 336 (494)
Q Consensus 265 ~~~~D~~~~~~hK~l~~p~g-----~G~~~~~~~~~~~~~~~~~~~y~~~~~~-~~~~~~s~--~~~~~~a~~~al~~l~ 336 (494)
..++|++++++|||++.|.| +|++++++. +...++....-...... ......+. ++..+...|+.++.+|
T Consensus 691 ~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~--l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G 768 (954)
T PRK05367 691 DIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH--LAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMG 768 (954)
T ss_pred hcCCCEEEecCcccCCCCcCCCCCceEEEeeccc--ccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHC
Confidence 24799999999999876655 568888742 22222211100000000 00111111 1123456889999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC---CCccEEEEEec---CCCCCCHHHHHHHHHhcCceeeccccCCC
Q 011057 337 FEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKD---EGVPLVAFSLK---DNKRHDEFEVAELLRRFGWIVPAYTMPAD 410 (494)
Q Consensus 337 ~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~---~~~~~v~f~~~---~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~ 410 (494)
.+|++++.++...+++|+.++|++. +++.... ....-++|.+. ...+.+..+++++|.+.|+..+...+|
T Consensus 769 ~~Glr~~a~~~~~~A~Yl~~~L~~~--~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~p-- 844 (954)
T PRK05367 769 AEGLRQATEVAILNANYIAKRLKDH--YPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFP-- 844 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh--cCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCc--
Confidence 9999999999999999999999875 5554322 12333444442 112457789999999999998764444
Q ss_pred CCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhcCccccccccccccCccCcccccc----ccc--------------
Q 011057 411 AQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLPSKVLVPASEQNGRNGKKTEIE----TQR-------------- 472 (494)
Q Consensus 411 ~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------------- 472 (494)
....+||+.++..+++|+|+|+++|+.+.+++.++.+..++...+.++++||+...- |.+
T Consensus 845 --v~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~~~~~~~~~~~~~~~~ap~~~~~~~~~~w~~~y~r~~~~~p~~~~ 922 (954)
T PRK05367 845 --VAGTLMVEPTESESKAELDRFCDAMIAIRAEIDEVEAGEWPAEDNPLKNAPHTAADLVADEWDHPYSREQAAFPLPSL 922 (954)
T ss_pred --cCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcchhhhCCCCHHHhccCCCCCCCCHHHhcCCCccc
Confidence 234689999999999999999999999999999988888887778888888877631 111
Q ss_pred ccchhhhhhhcc-cccccCCCCC
Q 011057 473 EVTTYWRKFVSE-RKANNKNKIC 494 (494)
Q Consensus 473 ~~~~~~~~~~~~-~~~~~~~~~~ 494 (494)
..+||||+|+|+ ++|||||+||
T Consensus 923 ~~~k~~~~~~r~~~~~gd~~~~c 945 (954)
T PRK05367 923 RANKYWPPVGRIDNVYGDRNLVC 945 (954)
T ss_pred ccCCcCCCcCcccccccceeeec
Confidence 248999999999 9999999999
No 15
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=2.6e-38 Score=318.24 Aligned_cols=369 Identities=30% Similarity=0.418 Sum_probs=289.3
Q ss_pred CCHHHHHHHHHHhhhhcCCCCCcccccccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCC
Q 011057 37 IPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSE 116 (494)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~ 116 (494)
.++.++++.++++...+- |...+.++.+++++|.+.+++.+++..+..+...+++..++++++++++++++|.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~---- 76 (371)
T PRK13520 2 LSEEEILEELEEYRSEDL-KYERILSSMCTEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPD---- 76 (371)
T ss_pred CCHHHHHHHHHHHHhcCC-CHHHeeeeeecCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC----
Confidence 357788888888765432 222345666677889888999888877655555567888888999999999999875
Q ss_pred CcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHH
Q 011057 117 TAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAV 196 (494)
Q Consensus 117 ~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~ 196 (494)
..+++++||++++..++.+++... ...+++|++++.+|+++.++++..|++++.+|.+++ +.+|+++|+
T Consensus 77 -~~~~~~~ggt~a~~~a~~~~~~~~---------~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~ 145 (371)
T PRK13520 77 -AYGYITSGGTEANIQAVRAARNLA---------KAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDD-YRVDVKAVE 145 (371)
T ss_pred -CCeEEecCcHHHHHHHHHHHHhhc---------cCCCceEEecCcchHHHHHHHHHcCceEEEecCCCC-CcCCHHHHH
Confidence 347899999999998887775420 001358999999999999999999999999998764 689999999
Q ss_pred HhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCc
Q 011057 197 EMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGH 276 (494)
Q Consensus 197 ~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~h 276 (494)
+++++++++|++++++|++|.+.|+++|.++|+++ |+++|||+||+++..++......+++...++|++++++|
T Consensus 146 ~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~------g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~ 219 (371)
T PRK13520 146 DLIDDNTIGIVGIAGTTELGQVDPIPELSKIALEN------GIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPH 219 (371)
T ss_pred HHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHc------CCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCc
Confidence 99998888888899999999999999999999999 999999999998765543322223444568999999999
Q ss_pred ccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHH
Q 011057 277 KYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKE 356 (494)
Q Consensus 277 K~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~ 356 (494)
||+++|.++|+++++++..+ ..+.....|..... .+...+++++..+++++++++.++.+|++++.++..+++++|.+
T Consensus 220 K~~~a~~~~G~~~~~~~~~~-~~l~~~~~~~~~~~-~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~ 297 (371)
T PRK13520 220 KMGLAPIPAGGILFRDESYL-DALAVDTPYLTSKK-QATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAE 297 (371)
T ss_pred cccCccCCceEEEEcCHHHH-HhhcccCccccCCC-CcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHH
Confidence 99999999999888765433 22222223432221 22344677777889999999999999999999999999999999
Q ss_pred HHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHH
Q 011057 357 GLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLD 436 (494)
Q Consensus 357 ~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~ 436 (494)
+|+++ +++++.++ ..++++|.++ +..++.++|.++||.++... ...++|++++.++|++|+++|++.
T Consensus 298 ~L~~~-g~~~~~~~-~~~~v~~~~~-----~~~~v~~~L~~~gi~v~~~~------~~~~iRis~~~~~t~edi~~~~~~ 364 (371)
T PRK13520 298 ELKER-GFEPVIEP-VLNIVAFDDP-----NPDEVREKLRERGWRVSVTR------CPEALRIVCMPHVTREHIENFLED 364 (371)
T ss_pred HHHhC-CCEEecCC-CceEEEEecC-----CHHHHHHHHHHCCceeccCC------CCCEEEEEEECCCCHHHHHHHHHH
Confidence 99998 48854444 5678888763 46789999999999875422 235799999999999999999999
Q ss_pred HHHHHH
Q 011057 437 ITKVLH 442 (494)
Q Consensus 437 l~~~~~ 442 (494)
|++++.
T Consensus 365 l~~~~~ 370 (371)
T PRK13520 365 LKEVKK 370 (371)
T ss_pred HHHHhh
Confidence 988754
No 16
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=2.2e-38 Score=315.52 Aligned_cols=330 Identities=35% Similarity=0.459 Sum_probs=264.6
Q ss_pred cccccCCChH-HHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 011057 61 ASFVTTWMEP-ECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKR 139 (494)
Q Consensus 61 ~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~ 139 (494)
+++++.+.++ .+.+.+...++.+...|+.+++..++|+++++|+++++|.+.. ...+++|+|||+|+++++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~---~~~~~~t~ggt~a~~~al~~~~~ 79 (345)
T cd06450 3 AGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSE---DADGVFTSGGSESNLLALLAARD 79 (345)
T ss_pred ccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCC---CCCEEEeCChhHHHHHHHHHHHH
Confidence 4444444444 4789999999988777888999999999999999999999721 23589999999999999999876
Q ss_pred HHHHHHHhcCCCC-CCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh------CCeEEEEeeCC
Q 011057 140 KWQNKRKAEGKPF-DKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE------NTICVAAILGS 212 (494)
Q Consensus 140 ~~~~~~~~~g~~~-~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~t~~vv~~~~~ 212 (494)
++.++.+..+... .+.+|+++..+|+++.++++.+|++++.++++++ +.+|+++|++++.+ ++++|++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~ 158 (345)
T cd06450 80 RARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED-GRMDPEALEAAIDEDKAEGLNPIMVVATAGT 158 (345)
T ss_pred HhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC-CCcCHHHHHHHHHHHHHCCCCcEEEEEeccc
Confidence 5433222122111 2347899999999999999999999999999875 58999999999987 78889999999
Q ss_pred CCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeC
Q 011057 213 TLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRN 292 (494)
Q Consensus 213 ~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~ 292 (494)
|++|.++|+++|+++|+++ ++|+|+|+||+.+..++...... .....++|++++++|||+++|.|+|+++++
T Consensus 159 ~~tG~~~~~~~i~~~~~~~------~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~- 230 (345)
T cd06450 159 TDTGAIDPLEEIADLAEKY------DLWLHVDAAYGGFLLPFPEPRHL-DFGIERVDSISVDPHKYGLVPLGCSAVLVR- 230 (345)
T ss_pred CCCCCCCCHHHHHHHHHHh------CCeEEEechhhHHHhhChhhHHH-hcCccccCEEEEchhHhhCCCcchHHHHHH-
Confidence 9999999999999999999 99999999999876533211111 223457999999999999999999987543
Q ss_pred CCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCC
Q 011057 293 KEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEG 372 (494)
Q Consensus 293 ~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 372 (494)
++++|++++.++.++++++.++..++++++.+.|+++++++++.++ .
T Consensus 231 --------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~ 277 (345)
T cd06450 231 --------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEP-N 277 (345)
T ss_pred --------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-c
Confidence 6778999999999999999999999999999999999889887655 5
Q ss_pred ccEEEEEecCC--CCCCHHHHHHHHHhcCcee-eccccCCCCCCceEEEEEeccCC-ChHHHHHHHHHHHH
Q 011057 373 VPLVAFSLKDN--KRHDEFEVAELLRRFGWIV-PAYTMPADAQHITVLRVVIREDF-SRTLAERLVLDITK 439 (494)
Q Consensus 373 ~~~v~f~~~~~--~~~~~~~l~~~L~~~Gi~v-~~~~~~~~~~~~~~lRvs~~~~~-t~~~id~~i~~l~~ 439 (494)
.++++|++.+. .+.+..++.++|.++|+++ +.... .+..++|++++..+ |.+|+++|+++|++
T Consensus 278 ~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~----~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 278 LSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTL----GGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred eeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEE----CCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 78999998541 0245678999999996553 32211 24568999999765 99999999988875
No 17
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.6e-37 Score=306.98 Aligned_cols=346 Identities=22% Similarity=0.181 Sum_probs=273.8
Q ss_pred cCCChHHHHHHHHHHhcc---cCC--CCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINK---NYV--DMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKR 139 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~---~~~--~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~ 139 (494)
++..+..+.+++.+++.. |.. .+......++.++++|+.+|+++|.++. ..++||.|+|+++.+...++..
T Consensus 31 ~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~----~eIvft~~tT~aln~va~~l~~ 106 (405)
T COG0520 31 TSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSS----DEIVFTRGTTEALNLVARGLGR 106 (405)
T ss_pred cccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC----CeEEEeCChhHHHHHHHHHhhh
Confidence 334455688888877643 222 2233446677888999999999999851 3599999999999988877754
Q ss_pred HHHHHHHhcCCCCCCCeEEeCCCcch----HHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCc
Q 011057 140 KWQNKRKAEGKPFDKPNIVTGANVQV----CWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLN 215 (494)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~----s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~t 215 (494)
.+. .+++||++...|. .|...++..|++++.+|+++ ++.+|+++++..++++|++|++++.+|.|
T Consensus 107 ~~~----------~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~-~g~~~~~~~~~~i~~~Tklvais~vSn~t 175 (405)
T COG0520 107 SLK----------PGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDD-DGLLDLDALEKLITPKTKLVALSHVSNVT 175 (405)
T ss_pred hhc----------CCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCC-CCCcCHHHHHHhcCCCceEEEEECccccc
Confidence 321 1279999999996 57778888899999999985 48999999999999999999999999999
Q ss_pred ccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCC
Q 011057 216 GEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKED 295 (494)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~ 295 (494)
|.+.|+++|+++||++ |++++||+||+.+..++ |++..++|++.+++|||+++|.|+|+++++++.
T Consensus 176 G~~~pv~~I~~la~~~------ga~v~VDaaq~~~h~~i-------dv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~- 241 (405)
T COG0520 176 GTVNPVKEIAELAHEH------GALVLVDAAQAAGHLPI-------DVQELGCDFLAFSGHKWLLGPTGIGVLYVRKEL- 241 (405)
T ss_pred cccchHHHHHHHHHHc------CCEEEEECccccCccCC-------CchhcCCCEEEEcccccccCCCceEEEEEchHH-
Confidence 9999999999999999 99999999999876644 666668999999999999999999999998753
Q ss_pred cccccccccC-----CCCC-------CCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCC
Q 011057 296 LPEELIFHIN-----YLGA-------DQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGR 363 (494)
Q Consensus 296 ~~~~~~~~~~-----y~~~-------~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (494)
+....+.... +... ..+...-.||.+...++++.++++.+...|++++.++.+++++++.+.|+++++
T Consensus 242 l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~ 321 (405)
T COG0520 242 LEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPG 321 (405)
T ss_pred HhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 2121111100 0000 000011236777777889999999999999999999999999999999999999
Q ss_pred eEEeecCC--CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCC-----CCceEEEEEeccCCChHHHHHHHHH
Q 011057 364 FNIVSKDE--GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADA-----QHITVLRVVIREDFSRTLAERLVLD 436 (494)
Q Consensus 364 ~~~~~~~~--~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~-----~~~~~lRvs~~~~~t~~~id~~i~~ 436 (494)
++++.++. +.++++|.+++ +.+.+++..|.++||.++....+... .-...+|+|++.++|.+|||+|++.
T Consensus 322 v~i~g~~~~~r~~~vsF~v~~---~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~a 398 (405)
T COG0520 322 VEIYGPPDADRGGIVSFNVKG---IHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEA 398 (405)
T ss_pred eEEecCCcccCceEEEEEeCC---CCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHH
Confidence 99998864 78999999865 57899999999999888665333211 1122399999999999999999999
Q ss_pred HHHHHH
Q 011057 437 ITKVLH 442 (494)
Q Consensus 437 l~~~~~ 442 (494)
|+++.+
T Consensus 399 L~~~~~ 404 (405)
T COG0520 399 LKKALA 404 (405)
T ss_pred HHHHhh
Confidence 998764
No 18
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=6.8e-37 Score=293.27 Aligned_cols=347 Identities=17% Similarity=0.140 Sum_probs=276.2
Q ss_pred cCCChHHHHHHHHHHhcccCCCCCC----ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINKNYVDMDE----YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRK 140 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~ 140 (494)
+++..|++.+++..++...++++.+ ...+..+-++.++.+|+++|.++ ..++||+||||++++++..+...
T Consensus 10 TTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~-----~eIiFTSG~TEsnNlaI~g~~~a 84 (386)
T COG1104 10 TTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADP-----EEIIFTSGATESNNLAIKGAALA 84 (386)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEecCCcHHHHHHHHhhHHh
Confidence 6778899999999988876555432 22566777889999999999987 45999999999999999875433
Q ss_pred HHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHc---CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCccc
Q 011057 141 WQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYF---EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGE 217 (494)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~---G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~ 217 (494)
+..+ ..+..||++..+|.++...++++ |++|.++|++.+ |.+|+++|+++|+++|.+|.+.+.||.+|+
T Consensus 85 ~~~~-------~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~-G~v~~e~L~~al~~~T~LVSim~aNnE~G~ 156 (386)
T COG1104 85 YRNA-------QKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSN-GLVDLEQLEEALRPDTILVSIMHANNETGT 156 (386)
T ss_pred hhcc-------cCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCC-CeEcHHHHHHhcCCCceEEEEEecccCeee
Confidence 2110 11258999999999999999888 999999999985 899999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcc
Q 011057 218 FEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP 297 (494)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~ 297 (494)
+.|+++|+++|+++ ++++|+|++|+.|-+|+ ++...++|.+++|+||+. +|.|+|++|+++...
T Consensus 157 IQpI~ei~~i~k~~------~i~fHvDAvQa~Gkipi-------~~~~~~vD~ls~SaHK~~-GpkGiGaLyv~~~~~-- 220 (386)
T COG1104 157 IQPIAEIGEICKER------GILFHVDAVQAVGKIPI-------DLEELGVDLLSFSAHKFG-GPKGIGALYVRPGVR-- 220 (386)
T ss_pred cccHHHHHHHHHHc------CCeEEEehhhhcCceec-------cccccCcceEEeehhhcc-CCCceEEEEECCCCc--
Confidence 99999999999999 99999999999887654 444446999999999985 899999999965422
Q ss_pred cccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhC-CCeEEeecC-CC-cc
Q 011057 298 EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKT-GRFNIVSKD-EG-VP 374 (494)
Q Consensus 298 ~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~~~~-~~-~~ 374 (494)
..+...++.++...-.||.+.+.++++..+++.. .+.++....+...++++|.+.|.+. |++.+...+ .+ .+
T Consensus 221 ----~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a-~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~ 295 (386)
T COG1104 221 ----LEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIA-VEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPN 295 (386)
T ss_pred ----cCceeccCcCCCCCCCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCC
Confidence 2333445555443345777777787777777654 3446677888999999999999976 777776653 23 35
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCC----------------CCCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 375 LVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPAD----------------AQHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~----------------~~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
++.|.+++ +..+.+.-.|..+||.+++..-... ..-...+|+|++..+|++|+|++++.|+
T Consensus 296 ~~~~~f~g---v~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~ 372 (386)
T COG1104 296 ILNFSFPG---VEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALK 372 (386)
T ss_pred eEEEEeCC---CcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHH
Confidence 77788854 5788999999999999864332110 0113679999999999999999999999
Q ss_pred HHHHHHhcCc
Q 011057 439 KVLHELDSLP 448 (494)
Q Consensus 439 ~~~~~l~~~~ 448 (494)
++++++++..
T Consensus 373 ~~i~~lr~~~ 382 (386)
T COG1104 373 EIIKRLRELS 382 (386)
T ss_pred HHHHHHhhhc
Confidence 9999998753
No 19
>PRK12566 glycine dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-37 Score=328.85 Aligned_cols=425 Identities=14% Similarity=0.084 Sum_probs=306.5
Q ss_pred CCCCHHHHHHHHHHhhhhcCC---CCCcccccccCC------ChHHHHHHHHHHhcccCCCC-CCChhhHHHHHHHHHHH
Q 011057 35 NSIPKEAAYQIINDELMLDGN---PRLNLASFVTTW------MEPECDKLMMAAINKNYVDM-DEYPVTTELQNRCVNII 104 (494)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~------~~p~~~~~~~~~~~~~~~~~-~~~~~~~~le~~~~~~l 104 (494)
.+.++.++++.++++...+-. ..+.+++ ||.. ..|. ...++....++.+ +.++++.++..++.+|+
T Consensus 477 ~~~SE~el~r~~~~La~kn~~~~~~~~~LGs-CTmK~n~~~~~~p~---s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l 552 (954)
T PRK12566 477 AHHSETEMLRYLKQLENKDLALNQSMIPLGS-CTMKLNATSEMIPI---TWPEFAQLHPFAPREQAEGYRAMIDELEAWL 552 (954)
T ss_pred cCCCHHHHHHHHHHHHhcCcCcccCcccCcc-cccCcCcHHhhhcc---cchhhhcCCCCCchhhhcCHHHHHHHHHHHH
Confidence 457899999999988765422 1122333 3322 1222 2223333345555 66889999999999999
Q ss_pred HHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEecc
Q 011057 105 ARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS 184 (494)
Q Consensus 105 a~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~ 184 (494)
++++|++. ..+.-.+|+++++.++++.+..+..+ |. ..+.+|+++...|.+....+...|++++.++++
T Consensus 553 ~eLtGmd~------~Sl~p~sGA~gE~A~Lmair~yh~~~----Ge-~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D 621 (954)
T PRK12566 553 CAITGFDA------ICMQPNSGAQGEYAGLLAIRRYHRSR----GQ-SQRDICLIPSSAHGTNPASAQMAGMRVVIVECD 621 (954)
T ss_pred HHHHCCCe------EeecCCchHHHHHHHHHHHHHHHHhc----CC-CCCCEEEecccccccCHHHHHHCCCEEEEeccC
Confidence 99999985 24445578889888887776544322 21 124689999999977777788899999999998
Q ss_pred CCccccCHHHHHHhhh---hCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc
Q 011057 185 EGYYVMDPVKAVEMVD---ENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW 261 (494)
Q Consensus 185 ~~~~~~d~~~L~~~i~---~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (494)
++ +.+|+++|+++++ +++.+|+++++++..+..+|+++|+++||++ |+++++|+|+..+..++..+
T Consensus 622 ~~-G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~------Galv~vDgA~~~a~~~l~~P---- 690 (954)
T PRK12566 622 PD-GNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQH------GGQVYMDGANLNAQVGLARP---- 690 (954)
T ss_pred CC-CCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHc------CCEEEEEeeChhhccCCCCh----
Confidence 64 7999999999997 5778899999998877778899999999999 99999999997544333222
Q ss_pred cccCCCceEEEEcCcccCCcCCceEEEEEeC---CCCcccccccccC--CCCCC--CCCcccccCcchHHHHHHHHHHHH
Q 011057 262 DFRLPLVKSINVSGHKYGLVYAGIGWVIWRN---KEDLPEELIFHIN--YLGAD--QPTFTLNFSKGSSQVIAQYYQLIR 334 (494)
Q Consensus 262 ~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~---~~~~~~~~~~~~~--y~~~~--~~~~~~~~s~~~~~~~a~~~al~~ 334 (494)
+..++|++++++|||++.|.|.|..+++. ...+...++..+. .-+.. .......++.++..+...|..++.
T Consensus 691 --g~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~ 768 (954)
T PRK12566 691 --ADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAM 768 (954)
T ss_pred --hhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHH
Confidence 23489999999999999998887776654 1222122221110 00100 111111233334446778888899
Q ss_pred hcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC---CccEEEEE---ecCCCCCCHHHHHHHHHhcCceeeccccC
Q 011057 335 LGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE---GVPLVAFS---LKDNKRHDEFEVAELLRRFGWIVPAYTMP 408 (494)
Q Consensus 335 l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~~v~f~---~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~ 408 (494)
+|.+ +.+..+....+++|+.++|.+. +++...+. ...-+.+. ++...+.+..+++++|.+.||..+...+|
T Consensus 769 lG~e-Lk~aa~~ailnAnYla~rL~~~--~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~fP 845 (954)
T PRK12566 769 MGPQ-LADASEVAILSANYLANQLGGA--FPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFP 845 (954)
T ss_pred HCHH-HHHHHHHHHHHHHHHHHHhHhh--CCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEeec
Confidence 9998 8888888899999999999873 55444321 11222333 32223467889999999999998765444
Q ss_pred CCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhcCccccccccccccCccCccccc---cccc-------------
Q 011057 409 ADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLPSKVLVPASEQNGRNGKKTEI---ETQR------------- 472 (494)
Q Consensus 409 ~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------- 472 (494)
....+||+.++..+++|+|+|+++|+.+.++++++.+..++...|+++++||+... .|.+
T Consensus 846 ----v~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~v~~g~~~~~~n~l~~apht~~~~~~~w~~~y~r~~a~~p~~~ 921 (954)
T PRK12566 846 ----VPGTLMVEPTESESKAELDRFVEAMLSIRAEIGKVQEGNWPAEDNPLKRAPHTLADVTGVWQRPYSIEQAVTPSAH 921 (954)
T ss_pred ----cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHHHHcCCCCcccCcccCCCCchHHhhccCCCCcChhhcccCCCc
Confidence 24579999999999999999999999999999999999889899999999998773 2332
Q ss_pred -ccchhhhhhhcc-cccccCCCCC
Q 011057 473 -EVTTYWRKFVSE-RKANNKNKIC 494 (494)
Q Consensus 473 -~~~~~~~~~~~~-~~~~~~~~~~ 494 (494)
..+||||+|+|+ ++|||||+||
T Consensus 922 ~~~~k~wp~v~r~d~~~gdrnl~c 945 (954)
T PRK12566 922 ARAHKYWPAVNRVDNVYGDRNLFC 945 (954)
T ss_pred ccCCCcCCCcCCcCcccccccccc
Confidence 137999999999 9999999999
No 20
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=100.00 E-value=6.1e-37 Score=329.71 Aligned_cols=420 Identities=12% Similarity=0.089 Sum_probs=305.1
Q ss_pred CCCHHHHHHHHHHhhhhcC---CCCCcccccccCCChHHHHHHHHHH---hcccCCCC-CCChhhHHHHHHHHHHHHHHh
Q 011057 36 SIPKEAAYQIINDELMLDG---NPRLNLASFVTTWMEPECDKLMMAA---INKNYVDM-DEYPVTTELQNRCVNIIARLF 108 (494)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~---~~~~~~~~-~~~~~~~~le~~~~~~la~l~ 108 (494)
-.++.++++++..+-..+- +..+.+++ ||....|.+.+..... .+-.++.+ +..+++.++..+++++|++++
T Consensus 503 ~~se~~~~r~~~~l~~~~~~~~~~~~plgs-ctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~ 581 (993)
T PLN02414 503 YHSEHELLRYLHRLQNKDLSLVHSMIPLGS-CTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEIT 581 (993)
T ss_pred ccCHHHHHHHHHHHhhcccccccCCccCcc-cccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3578889998877654321 22222333 5555556554443321 12223322 345699999999999999999
Q ss_pred CCCCCCCCCcceeeecChh----HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEecc
Q 011057 109 NAPLEDSETAVGVGTVGSS----EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS 184 (494)
Q Consensus 109 g~~~~~~~~~~~~~t~ggt----~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~ 184 (494)
|++. +.++.+++ +++++++.++... .|. ..+.+||+|..+|.+....+.+.|++++.++++
T Consensus 582 g~~~-------v~f~pnaga~ge~a~~~vi~~~~~~-------~Gd-~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d 646 (993)
T PLN02414 582 GFDS-------FSLQPNAGAAGEYAGLMVIRAYHLS-------RGD-HHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTD 646 (993)
T ss_pred CCCe-------EEEcCCCcHHHHHHHHHHHHHHHhc-------cCC-CCCCEEEeCCCcCccCHHHHHHCCCEEEEeccC
Confidence 9964 88888877 7877777777331 121 123589999999999999999999999999998
Q ss_pred CCccccCHHHHHHhhhh---CCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc
Q 011057 185 EGYYVMDPVKAVEMVDE---NTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW 261 (494)
Q Consensus 185 ~~~~~~d~~~L~~~i~~---~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (494)
++ +.+|+++|++++++ ++++|++++++|..|..+|+++|+++||++ |++++||+|+..+......+
T Consensus 647 ~~-G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~------Galv~vDgAq~~a~~~l~~p---- 715 (993)
T PLN02414 647 AK-GNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDN------GGQVYMDGANMNAQVGLTSP---- 715 (993)
T ss_pred CC-CCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHc------CCEEEEEecCHHhccCcCCc----
Confidence 64 79999999999985 678999999999999999999999999999 99999999997654322211
Q ss_pred cccCCCceEEEEcCcccCCcCC-----ceEEEEEeCCCCccccccccc-----CCCCCCCCCcccccCcc------hHHH
Q 011057 262 DFRLPLVKSINVSGHKYGLVYA-----GIGWVIWRNKEDLPEELIFHI-----NYLGADQPTFTLNFSKG------SSQV 325 (494)
Q Consensus 262 ~~~~~~~D~~~~~~hK~l~~p~-----g~G~~~~~~~~~~~~~~~~~~-----~y~~~~~~~~~~~~s~~------~~~~ 325 (494)
+..++|+++++.|||+++|. |+|+++++.. +...++... .+..... . ...|+.+ +..+
T Consensus 716 --~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--L~p~lPg~~v~~~~~~~~r~~-~-s~iGt~~~a~~g~al~l 789 (993)
T PLN02414 716 --GFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPSHPVVPTGGIPRPEK-T-QPLGTISAAPWGSALIL 789 (993)
T ss_pred --cccCCCEEEecCCccCCcCcccCCCCeeeEEEchh--hcccCCCCccccCCCcccccC-C-CCcCCccchhhhhHHHH
Confidence 23489999999999988665 4899988763 222222111 1110000 0 1114422 2445
Q ss_pred HHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC---CCccEEEEEecC---CCCCCHHHHHHHHHhcC
Q 011057 326 IAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKD---EGVPLVAFSLKD---NKRHDEFEVAELLRRFG 399 (494)
Q Consensus 326 ~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~---~~~~~v~f~~~~---~~~~~~~~l~~~L~~~G 399 (494)
...|+.++.+|.+|+++..++...+++|+.++|.+. +++.... ....-+.+.+.. ..+++..+++++|.+.|
T Consensus 790 ~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~--~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~G 867 (993)
T PLN02414 790 PISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH--YPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYG 867 (993)
T ss_pred HHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh--CCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcC
Confidence 677888899999999999999999999999999874 4444322 122233333321 12467789999999999
Q ss_pred ceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhcCccccccccccccCccCccccc----cccc---
Q 011057 400 WIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLPSKVLVPASEQNGRNGKKTEI----ETQR--- 472 (494)
Q Consensus 400 i~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--- 472 (494)
|..+...+| ....+|++.++..+++|+|+|+++|..+.+++.++.+..++...+.++++||+... .|.+
T Consensus 868 ihapt~~~p----v~~~lmiepTE~~skeelDrf~~al~~i~~e~~~~~~g~~~~~~~~l~~ap~~~~~~~~~~w~~~y~ 943 (993)
T PLN02414 868 FHAPTMSWP----VPGTLMIEPTESESKAELDRFCDALISIREEIADIENGKADRENNVLKGAPHPPSLLMADKWDKPYS 943 (993)
T ss_pred cEEeeeccc----cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCchhhcCCCChHHhhcCCCCCCcC
Confidence 998664433 25579999999999999999999999999999998777777777777777777663 1222
Q ss_pred -----------ccchhhhhhhcc-cccccCCCCC
Q 011057 473 -----------EVTTYWRKFVSE-RKANNKNKIC 494 (494)
Q Consensus 473 -----------~~~~~~~~~~~~-~~~~~~~~~~ 494 (494)
...||||+|+|+ ++|||+|+||
T Consensus 944 r~~a~~p~~~~~~~k~~~~v~r~d~~~gd~~l~c 977 (993)
T PLN02414 944 REYAAFPAPWVRASKFWPTTGRVDNVYGDRNLVC 977 (993)
T ss_pred hhhccCCCcccccCccCCCccccccccccccccc
Confidence 237999999999 9999999999
No 21
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=1.3e-35 Score=298.73 Aligned_cols=365 Identities=31% Similarity=0.443 Sum_probs=275.1
Q ss_pred HHHHHHHHHHhhhhc---CCCCCcccccccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCC
Q 011057 39 KEAAYQIINDELMLD---GNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDS 115 (494)
Q Consensus 39 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~ 115 (494)
.+++++.+.+++.-. +.++. +.++.+ .+.|.+.+++..++..+..+...+++...+++++++++++++|++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~--- 76 (373)
T TIGR03812 2 EEEVLEELKEYRSEDLKYSDGRI-LGSMCT-NPHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPD--- 76 (373)
T ss_pred HHHHHHHHHHHHhcCCCCCCCcE-EEEEeC-CchHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC---
Confidence 567777777765321 22332 344444 4556667777777665544444567788889999999999999975
Q ss_pred CCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHH
Q 011057 116 ETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKA 195 (494)
Q Consensus 116 ~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L 195 (494)
..+++++|+++++..++.++...... +..+++|+++..+|+++.++++..|++++.++++++ +.+|+++|
T Consensus 77 --~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~-~~~d~~~l 146 (373)
T TIGR03812 77 --AYGYIVSGGTEANIQAVRAAKNLARE-------EKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDED-YTVDVKDV 146 (373)
T ss_pred --CCeEEeccHHHHHHHHHHHHHHHHhc-------cCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCC-CCcCHHHH
Confidence 34788999999998887666432100 011258999999999999999999999999998764 78999999
Q ss_pred HHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCC---cccccccCCCceEEE
Q 011057 196 VEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYP---ELEWDFRLPLVKSIN 272 (494)
Q Consensus 196 ~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~---~~~~~~~~~~~D~~~ 272 (494)
++++++++..++++.++|+||.++|+++|.++|+++ ++|+|||+||+++..++... ....++...++|+++
T Consensus 147 ~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~------~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~ 220 (373)
T TIGR03812 147 EDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALEN------GIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSIT 220 (373)
T ss_pred HHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHc------CCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEE
Confidence 999988886666667899999999999999999999 99999999999876544311 112344455899999
Q ss_pred EcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHH
Q 011057 273 VSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAM 352 (494)
Q Consensus 273 ~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~ 352 (494)
+++|||+++|.++|+++++++..+. .+.....|..... .+...|+++...+++++++++.++++|++++.++..++++
T Consensus 221 ~s~~K~~~~~~~~G~~~~~~~~~~~-~l~~~~~~~~~~~-~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~ 298 (373)
T TIGR03812 221 IDPHKMGLSPIPAGGILFRSKSYLK-YLSVDAPYLTVKK-QATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTR 298 (373)
T ss_pred ECccccCCCcCCceEEEEeCHHHHh-hhcccCcccCCCC-CcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 9999999999889888877664432 2222233433221 2233478877888999999999999999999999999999
Q ss_pred HHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHH
Q 011057 353 VLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAER 432 (494)
Q Consensus 353 ~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~ 432 (494)
+|+++|++++ ++.+.++ ..++++|.+++ ..++.++|.++||.++... ...++|++++.++|++|+++
T Consensus 299 ~l~~~L~~~g-~~~~~~~-~~~~v~~~~~~-----~~~v~~~L~~~gi~v~~~~------~~~~iRis~~~~~t~edid~ 365 (373)
T TIGR03812 299 YLVEELKKIG-FEPVIEP-VLNIVAFEVDD-----PEEVRKKLRDRGWYVSVTR------CPKALRIVVMPHVTREHIEE 365 (373)
T ss_pred HHHHHHHhCC-CeEEcCC-CceEEEEEeCC-----HHHHHHHHHHCCceeccCC------CCCEEEEEEECCCCHHHHHH
Confidence 9999999997 6544443 57888888742 4589999999999875421 23579999999999999999
Q ss_pred HHHHHHH
Q 011057 433 LVLDITK 439 (494)
Q Consensus 433 ~i~~l~~ 439 (494)
+++.|++
T Consensus 366 l~~~L~~ 372 (373)
T TIGR03812 366 FLEDLKE 372 (373)
T ss_pred HHHHHhh
Confidence 9988875
No 22
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-37 Score=287.55 Aligned_cols=410 Identities=17% Similarity=0.176 Sum_probs=312.4
Q ss_pred cccccCchHHhhcCCCCCCCCCCCCHHHHHHHHHHhhh---hcCCCCCcccccccCCCh--HHHHHHHHHHhcccCCCCC
Q 011057 14 IHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELM---LDGNPRLNLASFVTTWME--PECDKLMMAAINKNYVDMD 88 (494)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~~ 88 (494)
|-.+.-|..+...+.- ++|+++.+..+++.+-++.+. .+|||++ .+......+ ..+.+++.++.|.|.+.|+
T Consensus 58 v~~fhhP~~L~~l~nl-el~~~~esl~qil~~cr~tl~y~vKTgHprf--fNQl~~glD~~~Lag~wlT~t~Ntn~~TYE 134 (510)
T KOG0629|consen 58 VLDFHHPDELKELFNL-ELRDQPESLAQILEDCRDTLKYSVKTGHPRF--FNQLSSGLDPIGLAGEWLTSTANTNMFTYE 134 (510)
T ss_pred eecccChHHHHHHhCc-ccCCChhhHHHHHHHHHHHHHhhhccCCCcc--hhhhccCCCHHHHHHHHHHhccCCCCceEE
Confidence 4456667777765554 899999999999999888875 4789987 222222333 3478999999999999899
Q ss_pred CChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCC-eEEeCCCcchHH
Q 011057 89 EYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKP-NIVTGANVQVCW 167 (494)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~-~vi~~~~~h~s~ 167 (494)
..|...-+|.++...+.++.|.+.. ..++|+.||+-+|++++.+++.+..+..+..|...-++ .++.|+.+|+|+
T Consensus 135 iAPvF~lmE~~vl~km~~ivGw~~~----~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi 210 (510)
T KOG0629|consen 135 IAPVFVLMEEEVLAKMREIVGWEEG----GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSI 210 (510)
T ss_pred ecceEEeehHHHHHHHHHHhCCCCC----CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhH
Confidence 9999999999999999999999873 46999999999999999999988777766566543334 456789999999
Q ss_pred HHHHHHcCCe---eEEEeccCCccccCHHHHHHhhhh---C---CeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCC
Q 011057 168 EKFARYFEVE---LKEVKLSEGYYVMDPVKAVEMVDE---N---TICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWD 238 (494)
Q Consensus 168 ~~~~~~~G~~---v~~v~~~~~~~~~d~~~L~~~i~~---~---t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~ 238 (494)
.+++..+|+. ++.|++++. |.|++++||+.|-+ + |..|.+|.|+|..|.+|||+.|+++|++| +
T Consensus 211 ~kaAa~lg~gtd~c~~v~t~e~-Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~------~ 283 (510)
T KOG0629|consen 211 KKAAAFLGLGTDHCIKVKTDER-GKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKH------K 283 (510)
T ss_pred HHHHHHhccCCceeEEeccccc-CccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhc------C
Confidence 9999999964 889999885 79999999998854 2 68899999999999999999999999999 9
Q ss_pred ceEEEecccccccccccCCcccccc-cCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCc---
Q 011057 239 TPIHVDAASGGFIAPFLYPELEWDF-RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTF--- 314 (494)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~--- 314 (494)
+|+|||+|+||+.+ .....++.+ +++.++|+++++||++++|.-|+.++++....+..+....+.|+......+
T Consensus 284 lWmHvDAAwGGglL--mS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS 361 (510)
T KOG0629|consen 284 LWMHVDAAWGGGLL--MSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVS 361 (510)
T ss_pred EEEEeecccccccc--cChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecc
Confidence 99999999999865 555566655 578999999999999999999999999888777666666666665432211
Q ss_pred ------ccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC-CCccEEEEEecCCC---
Q 011057 315 ------TLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKD-EGVPLVAFSLKDNK--- 384 (494)
Q Consensus 315 ------~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~~v~f~~~~~~--- 384 (494)
.+.+-| -..++++|..+++-|..|+++.++++.++|+||.++|++.++++.+... +....|+|-+.++.
T Consensus 362 ~DTgdK~iQCGR-h~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~ 440 (510)
T KOG0629|consen 362 YDTGDKAIQCGR-HVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRG 440 (510)
T ss_pred cccccchhhcCc-cccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhcc
Confidence 222333 1568999999999999999999999999999999999999987766543 24445565543321
Q ss_pred -CCC----------HHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccC-CChHHHHHHHHHHHHHHHHHhcCcc
Q 011057 385 -RHD----------EFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIRED-FSRTLAERLVLDITKVLHELDSLPS 449 (494)
Q Consensus 385 -~~~----------~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~-~t~~~id~~i~~l~~~~~~l~~~~~ 449 (494)
..+ +-.+-.++.++|-..-+|.. ......++|..+.+. .+..++ .-++++|.++++
T Consensus 441 ~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqP--l~~~~nffr~v~sn~a~~~ad~-------dflldEIerlgq 508 (510)
T KOG0629|consen 441 WQENPERDSRLVKVAPKIKERMMKKGTTMIGYQP--LGDKPNFFRMVISNPALTEADL-------DFLLDEIERLGQ 508 (510)
T ss_pred CcccchhhhHHHhhCcHHHHHHHhccceeeEecc--cccccchhheecccchhhhhhH-------HHHHHHHHHhcc
Confidence 001 11345667788876544432 223456899887653 334444 444555555443
No 23
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=3.1e-32 Score=276.57 Aligned_cols=345 Identities=18% Similarity=0.142 Sum_probs=259.1
Q ss_pred cCCChHHHHHHHHHHhcccCCCCC-----CChhhHHHHHHHHHHHHHHhCC-CCCCCCCcceeeecChhHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINKNYVDMD-----EYPVTTELQNRCVNIIARLFNA-PLEDSETAVGVGTVGSSEAIMLAGLAFK 138 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~le~~~~~~la~l~g~-~~~~~~~~~~~~t~ggt~a~~~a~~a~~ 138 (494)
+++.++.+.+++..++.....+.. ......+..+++++.+++++|. ++ ..+++|+|+|+++.+++.++.
T Consensus 28 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~~i~~~~~~t~~i~~~~~~~~ 102 (401)
T PRK10874 28 TALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDA-----KNIVWTRGTTESINLVAQSYA 102 (401)
T ss_pred ccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCC-----CEEEEECCHHHHHHHHHHHhh
Confidence 345566788888877765332221 1235566777899999999999 43 358899999999998877763
Q ss_pred HHHHHHHHhcCCCCCCCeEEeCCCcchH----HHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCC
Q 011057 139 RKWQNKRKAEGKPFDKPNIVTGANVQVC----WEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTL 214 (494)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~ 214 (494)
... . ..+++|++++++|++ +...++..|++++.++++++ +.+|+++++++++++|++|++++++|+
T Consensus 103 ~~~--------~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~t~lv~i~~~~n~ 172 (401)
T PRK10874 103 RPR--------L-QPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGAD-RLPDVDLLPELITPRTRILALGQMSNV 172 (401)
T ss_pred hcc--------C-CCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCC-CcCCHHHHHHhcCcCcEEEEEeCCccc
Confidence 210 0 013689999999965 55677888999999998764 789999999999999999999999999
Q ss_pred cccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCC
Q 011057 215 NGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 294 (494)
Q Consensus 215 tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~ 294 (494)
||.+.|+++|+++|+++ |++++||++|+.+..++ ++...++|++++++||+ ++|.|+|+++++++
T Consensus 173 tG~~~~~~~i~~l~~~~------g~~~ivD~a~~~g~~~~-------~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~- 237 (401)
T PRK10874 173 TGGCPDLARAITLAHQA------GMVVMVDGAQGAVHFPA-------DVQALDIDFYAFSGHKL-YGPTGIGVLYGKSE- 237 (401)
T ss_pred ccCcCCHHHHHHHHHHc------CCEEEEECCcccccccC-------CchhcCCCEEEEecccc-cCCCccEEEEEchH-
Confidence 99999999999999999 99999999998654432 22233699999999995 57889999998654
Q ss_pred Ccccccccc--------cCCCC---C-CCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC
Q 011057 295 DLPEELIFH--------INYLG---A-DQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTG 362 (494)
Q Consensus 295 ~~~~~~~~~--------~~y~~---~-~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~ 362 (494)
.+....+.. ..|.. . ....+. .|+.+...++++.++++.+...|+.++.++..++++++.++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~ 316 (401)
T PRK10874 238 LLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFE-AGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLP 316 (401)
T ss_pred HHhcCCCeecCCcceEeeccCccCCCCChhhcc-CCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 221110000 00000 0 001112 3677777889999999988888888888999999999999999998
Q ss_pred CeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCC-----CCCceEEEEEeccCCChHHHHHHHHHH
Q 011057 363 RFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPAD-----AQHITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 363 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~-----~~~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
+++++.++ ..++++|.+.+ .+..++.+.|.++||.++....+.. .....++|+|++.++|.+|+++|++.|
T Consensus 317 g~~~~~~~-~~~i~~~~~~~---~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al 392 (401)
T PRK10874 317 GFRSFRCQ-DSSLLAFDFAG---VHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAV 392 (401)
T ss_pred CEEEeCCC-CCcEEEEEECC---cCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHH
Confidence 89887655 56788888743 4678999999999999865433211 011357999999999999999999999
Q ss_pred HHHHHHH
Q 011057 438 TKVLHEL 444 (494)
Q Consensus 438 ~~~~~~l 444 (494)
+++++.+
T Consensus 393 ~~~~~~~ 399 (401)
T PRK10874 393 DRALELL 399 (401)
T ss_pred HHHHHHh
Confidence 9988764
No 24
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=3.7e-32 Score=275.77 Aligned_cols=342 Identities=19% Similarity=0.131 Sum_probs=257.1
Q ss_pred cCCChHHHHHHHHHHhcccCCCC--CC---ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINKNYVDM--DE---YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKR 139 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~~~~~~--~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~ 139 (494)
+++.++.+.+++.+++.....+. .. .+...+..+++++.+++++|.+.. ..+++|+|+|+++.+++.++..
T Consensus 25 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~~i~~t~g~t~~l~~~~~~~~~ 100 (398)
T TIGR03392 25 TALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDA----ENIVWTRGTTESINLVAQSYAR 100 (398)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC----CeEEEeCChHHHHHHHHHHhhh
Confidence 34556678888887775422221 11 223455667899999999998521 3488999999999988776632
Q ss_pred HHHHHHHhcCCCCCCCeEEeCCCcchH----HHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCc
Q 011057 140 KWQNKRKAEGKPFDKPNIVTGANVQVC----WEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLN 215 (494)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~t 215 (494)
.. . ..+++|++++++|++ +...++..|++++.++++.+ +.+|+++|++++.++|++|++++++|+|
T Consensus 101 ~~--------~-~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~~~l~~~i~~~t~lv~i~~~~n~t 170 (398)
T TIGR03392 101 PR--------L-QPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGAD-LLPDIRQLPELLTPRTRILALGQMSNVT 170 (398)
T ss_pred cc--------C-CCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCC-CCcCHHHHHHHhccCceEEEEECccccc
Confidence 10 0 013589999999976 45667889999999999765 6799999999999999999999999999
Q ss_pred ccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCC
Q 011057 216 GEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKED 295 (494)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~ 295 (494)
|.+.|+++|+++|+++ |+++++|++|+.+..++ ++...++|++++++||+ ++|.|+|+++++++ .
T Consensus 171 G~~~~~~~i~~~~~~~------~~~~ivD~a~~~~~~~~-------~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~-~ 235 (398)
T TIGR03392 171 GGCPDLARAITLAHQY------GAVVVVDGAQGVVHGPP-------DVQALDIDFYAFSGHKL-YGPTGIGVLYGKTE-L 235 (398)
T ss_pred cccCCHHHHHHHHHHc------CCEEEEEhhhhcCCCCC-------ChhhcCCCEEEEecccc-cCCCceEEEEEcHH-H
Confidence 9999999999999999 99999999998654332 22223689999999995 57889999987654 2
Q ss_pred cccccccccCCCCCC----------------CCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHh
Q 011057 296 LPEELIFHINYLGAD----------------QPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLE 359 (494)
Q Consensus 296 ~~~~~~~~~~y~~~~----------------~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~ 359 (494)
+.. +. .+.++. ...+. .||.+...++++.++++.+...|++++.++..++++++.+.|+
T Consensus 236 ~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e-~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~ 310 (398)
T TIGR03392 236 LEA-MP---PWQGGGKMLSHVSFDGFIPQAVPHRFE-AGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLA 310 (398)
T ss_pred Hhh-CC---CeecCCceEeeccccccccCCChhhcc-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Confidence 211 11 111110 00111 3677777889999999998888888888999999999999999
Q ss_pred hCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCC-----CCCceEEEEEeccCCChHHHHHHH
Q 011057 360 KTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPAD-----AQHITVLRVVIREDFSRTLAERLV 434 (494)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~-----~~~~~~lRvs~~~~~t~~~id~~i 434 (494)
+++++++..++ ..++++|.+.+ .+..++.++|.++||.++....... .....++|+|++.++|.+|+++++
T Consensus 311 ~l~g~~~~~~~-~~~i~~~~~~~---~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~ 386 (398)
T TIGR03392 311 QLPGFRSFRCP-GSSLLAFDFAG---VHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALV 386 (398)
T ss_pred cCCCeEEeCCC-CCcEEEEEeCC---cCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHH
Confidence 99889877654 46788888743 4678999999999999865432210 011357999999999999999999
Q ss_pred HHHHHHHHHH
Q 011057 435 LDITKVLHEL 444 (494)
Q Consensus 435 ~~l~~~~~~l 444 (494)
+.|+++++.+
T Consensus 387 ~~l~~~~~~~ 396 (398)
T TIGR03392 387 DAVGAALELL 396 (398)
T ss_pred HHHHHHHHHh
Confidence 9999988765
No 25
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=8.4e-32 Score=271.44 Aligned_cols=342 Identities=14% Similarity=0.077 Sum_probs=256.0
Q ss_pred cCCChHHHHHHHHHHhcccCCCCC-CC---hhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINKNYVDMD-EY---PVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRK 140 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~~~~~~~-~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~ 140 (494)
+++.++.+.+++.+++.....++. .+ +...++.+++++++++++|.++ ..+++|+|+|+++.+++.++...
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~-----~~i~~t~~~t~a~~~al~~~~~~ 82 (379)
T TIGR03402 8 TTRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEP-----DEIIFTSGGTESDNTAIKSALAA 82 (379)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEeCcHHHHHHHHHHHHHHh
Confidence 335567788888877754333222 11 3456677789999999999875 35899999999999888776431
Q ss_pred HHHHHHhcCCCCCCCeEEeCCCcchHHHHHH---HHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCccc
Q 011057 141 WQNKRKAEGKPFDKPNIVTGANVQVCWEKFA---RYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGE 217 (494)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~---~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~ 217 (494)
. ..+++|+++..+|+++.... ...|++++.++++++ +.+|++++++++++++++|++++++|+||.
T Consensus 83 ~----------~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~ 151 (379)
T TIGR03402 83 Q----------PEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEE-GRLDLEELRAAITDDTALVSVMWANNETGT 151 (379)
T ss_pred c----------CCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCC-CcCCHHHHHHhcCCCcEEEEEEcccCCeee
Confidence 1 01257899999998765443 346999999998764 689999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcc
Q 011057 218 FEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP 297 (494)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~ 297 (494)
+.|+++|+++|+++ |+++|+|++|+.+..++ ++...++|++++++|| +++|.|+|++++++...+
T Consensus 152 ~~~~~~I~~l~~~~------g~~vivD~~~~~g~~~~-------~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~~- 216 (379)
T TIGR03402 152 IFPIEEIGEIAKER------GALFHTDAVQAVGKIPI-------DLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGTRF- 216 (379)
T ss_pred cccHHHHHHHHHHc------CCEEEEECccccccccc-------CcccCCCCEEEEcHHH-cCCCCceEEEEECCCCCC-
Confidence 99999999999999 99999999998765433 3333579999999999 678999999999865321
Q ss_pred cccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhh-CCCeEEeecCC-C-cc
Q 011057 298 EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEK-TGRFNIVSKDE-G-VP 374 (494)
Q Consensus 298 ~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~-~-~~ 374 (494)
.+.+.++......-.++.+...++++.++++.+. +.++++.++..++++++.++|++ ++++++..++. + .+
T Consensus 217 -----~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~ 290 (379)
T TIGR03402 217 -----RPLLRGGHQERGRRAGTENVPGIVGLGKAAELAT-EHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPN 290 (379)
T ss_pred -----CCcccCCccCCCcCCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCC
Confidence 1122222111111136777777888888887764 35778888999999999999986 88888876532 2 34
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCC----------------CCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 375 LVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADA----------------QHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~----------------~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
++.|.+.. .+..++.+.|.++||.++........ .....+|+|++.++|.+|||++++.|+
T Consensus 291 ~~~~~~~~---~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~ 367 (379)
T TIGR03402 291 TVNISFEY---IEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLP 367 (379)
T ss_pred EEEEEecC---CCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHH
Confidence 77777743 46789999999999998643211000 013579999999999999999999999
Q ss_pred HHHHHHhc
Q 011057 439 KVLHELDS 446 (494)
Q Consensus 439 ~~~~~l~~ 446 (494)
++++.+++
T Consensus 368 ~~~~~~~~ 375 (379)
T TIGR03402 368 PIIARLRA 375 (379)
T ss_pred HHHHHHHh
Confidence 99887654
No 26
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=1e-31 Score=276.45 Aligned_cols=388 Identities=14% Similarity=0.081 Sum_probs=269.0
Q ss_pred CCCCCCCCCHHHHHHHHHHhhhhcCC-CCCccccc-ccCCChHHHHHHHHHHh-cccCCCC---CCChhhHHHHHHHHHH
Q 011057 30 FTMPENSIPKEAAYQIINDELMLDGN-PRLNLASF-VTTWMEPECDKLMMAAI-NKNYVDM---DEYPVTTELQNRCVNI 103 (494)
Q Consensus 30 ~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~p~~~~~~~~~~-~~~~~~~---~~~~~~~~le~~~~~~ 103 (494)
+.+|+ +++.+++++++++...+.. ....++.+ .+...+|.+.+.+.+.- ..+...| ..+++..+++.+++++
T Consensus 44 ~~~~~--~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~ 121 (481)
T PRK04366 44 PELPE--VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEW 121 (481)
T ss_pred CCCCC--CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHH
Confidence 35666 8999999999988765432 11112223 34445677777776541 1233334 3567889999999999
Q ss_pred HHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEec
Q 011057 104 IARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (494)
Q Consensus 104 la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~ 183 (494)
+++++|++. . .+..++|+.+...++.+++..... .|. ..+.+|+++.+.|+++...++..|++++.+++
T Consensus 122 la~l~G~~~-----~-~l~~~~GA~a~~~~l~~~r~~~~~----~Gd-~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~ 190 (481)
T PRK04366 122 LKEITGMDA-----V-TLQPAAGAHGELTGLLMIRAYHEA----RGD-TKRTEVIVPDSAHGTNPASAAMAGFKVVEIPS 190 (481)
T ss_pred HHHHhCCCc-----e-EEEeCcHHHHHHHHHHHHHHHhhc----cCc-CCCCEEEEcCCccHhHHHHHHHcCCEEEEeec
Confidence 999999973 1 344455656655544433321110 110 02358999999999999999999999999999
Q ss_pred cCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccc-cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccc
Q 011057 184 SEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEF-EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWD 262 (494)
Q Consensus 184 ~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~-~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~ 262 (494)
+++ +.+|+++|+++++++|++|++++|+ ++|.+ +|+++|+++||++ +++++||+|+..+..+.. +
T Consensus 191 ~~~-~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~------gal~iVD~a~~~~~~g~~------~ 256 (481)
T PRK04366 191 NED-GLVDLEALKAAVGEDTAALMLTNPN-TLGLFERNILEIAEIVHEA------GGLLYYDGANLNAILGKA------R 256 (481)
T ss_pred CCC-CCcCHHHHHhhcccCCeEEEEeCCC-CccccchHHHHHHHHHHHc------CCEEEEEecChhhhcccC------C
Confidence 764 7899999999999999999999988 89988 5899999999999 999999999975533222 1
Q ss_pred ccCCCceEEEEcCcccCCcCC-----ceEEEEEeCCCCcccccccc------cCCCCCCCCCc----ccccCcchHHHHH
Q 011057 263 FRLPLVKSINVSGHKYGLVYA-----GIGWVIWRNKEDLPEELIFH------INYLGADQPTF----TLNFSKGSSQVIA 327 (494)
Q Consensus 263 ~~~~~~D~~~~~~hK~l~~p~-----g~G~~~~~~~~~~~~~~~~~------~~y~~~~~~~~----~~~~s~~~~~~~a 327 (494)
.+..++|++++++|||+++|. |+|+++++++ .. +.++.. ..|....+... .-.++.+...+++
T Consensus 257 ~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~-~~-~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~ 334 (481)
T PRK04366 257 PGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE-LA-PFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVR 334 (481)
T ss_pred ccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh-hH-hhCCCCeeeccCCceeecccccccCCCcccccCchHHHHH
Confidence 123489999999999998664 4568887764 21 111100 01111100000 0112333455678
Q ss_pred HHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEec--CCCCCCHHHHHHHHHhcCceeecc
Q 011057 328 QYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLK--DNKRHDEFEVAELLRRFGWIVPAY 405 (494)
Q Consensus 328 ~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~--~~~~~~~~~l~~~L~~~Gi~v~~~ 405 (494)
+|..+..+|.+|++++.+++.++++||+++|+++ +++..+....+.+.|... ...+.+..++.++|.++||.+...
T Consensus 335 a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~ 412 (481)
T PRK04366 335 AYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTI 412 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCcc
Confidence 8899999999999999999999999999999987 444333222333444321 112457889999999999987543
Q ss_pred ccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhcCccc
Q 011057 406 TMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLPSK 450 (494)
Q Consensus 406 ~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~~~~~ 450 (494)
..|.. ....+|++++..+|++|||+|+++|+++.+++.+.++.
T Consensus 413 ~~p~~--~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~~~~~ 455 (481)
T PRK04366 413 YFPLI--VPEALMIEPTETESKETLDAFIAAMKQIAEEAKENPEL 455 (481)
T ss_pred ccccc--cCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHhCcHh
Confidence 34422 13479999999999999999999999999988885443
No 27
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=1.1e-31 Score=272.95 Aligned_cols=341 Identities=18% Similarity=0.154 Sum_probs=257.3
Q ss_pred cCCChHHHHHHHHHHhcccCCC-----CCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINKNYVD-----MDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKR 139 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~ 139 (494)
+++.++.+.+++.+++.....+ +...+...+..+++++.+++++|.... ..+++|+|+|+++..++.+...
T Consensus 32 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~----~~v~~t~g~t~~l~~~~~~~~~ 107 (406)
T PRK09295 32 SAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSA----EELVFVRGTTEGINLVANSWGN 107 (406)
T ss_pred cccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCC----CeEEEeCCHHHHHHHHHHHhhh
Confidence 4455667888888777542221 112334566677899999999998321 3589999999999877766422
Q ss_pred HHHHHHHhcCCCCCCCeEEeCCCcchH----HHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCc
Q 011057 140 KWQNKRKAEGKPFDKPNIVTGANVQVC----WEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLN 215 (494)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~t 215 (494)
... ..+++|+++..+|.+ +...++..|++++.++++++ +.+|+++|+++++++|++|++++++|+|
T Consensus 108 ~~~---------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~t~lv~l~~~~n~t 177 (406)
T PRK09295 108 SNV---------RAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPD-GTLQLETLPALFDERTRLLAITHVSNVL 177 (406)
T ss_pred hcC---------CCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC-CCCCHHHHHHhcCCCcEEEEEecchhcc
Confidence 110 012589999988864 45667788999999998764 6899999999999999999999999999
Q ss_pred ccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCC
Q 011057 216 GEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKED 295 (494)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~ 295 (494)
|.+.|+++|.++|+++ +++++||++|+.+..++ ++...++|++++++|| +++|.|+|+++++++.
T Consensus 178 G~~~~~~~i~~~~~~~------~~~vivD~a~~~g~~~~-------~~~~~~~D~~~~s~~K-~~gp~G~G~l~~~~~~- 242 (406)
T PRK09295 178 GTENPLAEMIALAHQH------GAKVLVDGAQAVMHHPV-------DVQALDCDFYVFSGHK-LYGPTGIGILYVKEAL- 242 (406)
T ss_pred cccCCHHHHHHHHHHc------CCEEEEEcccccCcccc-------CchhcCCCEEEeehhh-ccCCCCcEEEEEchHh-
Confidence 9999999999999999 99999999998765433 3333479999999999 5578899999987642
Q ss_pred cccccccccCCCCCC-----------------CCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHH
Q 011057 296 LPEELIFHINYLGAD-----------------QPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGL 358 (494)
Q Consensus 296 ~~~~~~~~~~y~~~~-----------------~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L 358 (494)
+ +.+. .+.++. ...+ -.||++...++++.++++.+.+.|++++.++..++++++.+.|
T Consensus 243 ~-~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~r~-e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l 317 (406)
T PRK09295 243 L-QEMP---PWEGGGSMIATVSLTEGTTWAKAPWRF-EAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQL 317 (406)
T ss_pred H-hhCC---CcccCCceeeeeecCCccccCCchhhc-CCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 1 1111 111110 0111 1367888888999999999988889999999999999999999
Q ss_pred hhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCC-----CCCceEEEEEeccCCChHHHHHH
Q 011057 359 EKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPAD-----AQHITVLRVVIREDFSRTLAERL 433 (494)
Q Consensus 359 ~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~-----~~~~~~lRvs~~~~~t~~~id~~ 433 (494)
+++++++++.+..+.++++|.+++ .+..++.+.|.++||.++....... .....++|+|++.++|.+|+|+|
T Consensus 318 ~~~~~~~~~~~~~~~~iv~~~~~~---~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l 394 (406)
T PRK09295 318 ESVPDLTLYGPQNRLGVIAFNLGK---HHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRL 394 (406)
T ss_pred hcCCCEEEeCCCCCceEEEEEECC---cCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHH
Confidence 999889988764457899998853 4677899999999998854321110 01124799999999999999999
Q ss_pred HHHHHHHHH
Q 011057 434 VLDITKVLH 442 (494)
Q Consensus 434 i~~l~~~~~ 442 (494)
++.|+++..
T Consensus 395 ~~~l~~i~~ 403 (406)
T PRK09295 395 VAGLQRIHR 403 (406)
T ss_pred HHHHHHHHH
Confidence 999988754
No 28
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=1.6e-31 Score=267.61 Aligned_cols=328 Identities=16% Similarity=0.088 Sum_probs=245.0
Q ss_pred cCCChHHHHHHHHHHhcccCCCCCC-----ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINKNYVDMDE-----YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKR 139 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~ 139 (494)
+++.++.+.+++.+++.....++.. .+...++.+++++.+++++|.++ ..+++|+|+|+++++++..+..
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~-----~~v~~t~~~t~a~~~~l~~~~~ 82 (364)
T PLN02651 8 TTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADP-----KEIIFTSGATESNNLAIKGVMH 82 (364)
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEeCCHHHHHHHHHHHHHH
Confidence 3355677888887776543332221 23456777889999999999975 3488999999999988877643
Q ss_pred HHHHHHHhcCCCCCCCeEEeCCCcchHHHHHH---HHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcc
Q 011057 140 KWQNKRKAEGKPFDKPNIVTGANVQVCWEKFA---RYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNG 216 (494)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~---~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG 216 (494)
... ..+++|+++...|+++.... ...|++++.++++++ +.+|++++++++++++++|++++++|+||
T Consensus 83 ~~~---------~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~t~lv~v~~~~n~tG 152 (364)
T PLN02651 83 FYK---------DKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSD-GLVDLDELAAAIRPDTALVSVMAVNNEIG 152 (364)
T ss_pred hcc---------CCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCC-CcCCHHHHHHhcCCCcEEEEEECCCCCce
Confidence 211 11358999999998765543 346899999998764 78999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCc
Q 011057 217 EFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDL 296 (494)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~ 296 (494)
.+.|+++|+++||++ |++++||++|+.+..++ ++...++|++++++||| ++|.|+|+++++++...
T Consensus 153 ~~~~l~~I~~~~~~~------g~~~~vD~a~~~g~~~~-------~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~ 218 (364)
T PLN02651 153 VIQPVEEIGELCREK------KVLFHTDAAQAVGKIPV-------DVDDLGVDLMSISGHKI-YGPKGVGALYVRRRPRV 218 (364)
T ss_pred ecccHHHHHHHHHHc------CCEEEEEcchhhCCccc-------CcccCCCCEEEechhhh-CCCCceEEEEEcCCCCC
Confidence 999999999999999 99999999999876544 34445799999999998 68999999999875321
Q ss_pred ccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhh-CCCeEEeecC--C--
Q 011057 297 PEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEK-TGRFNIVSKD--E-- 371 (494)
Q Consensus 297 ~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~--~-- 371 (494)
. ..+.+.++........||.+...++++.++++.+... .+++.++..++++++.+.|++ +++++++.+. .
T Consensus 219 -~---l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~-~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~ 293 (364)
T PLN02651 219 -R---LEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKE-MDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKR 293 (364)
T ss_pred -C---CCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccC
Confidence 1 1122222221111124788888899999999988754 488889999999999999986 6779998752 1
Q ss_pred CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCC-------------C---CCceEEEEEeccCCChHHHH
Q 011057 372 GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPAD-------------A---QHITVLRVVIREDFSRTLAE 431 (494)
Q Consensus 372 ~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~-------------~---~~~~~lRvs~~~~~t~~~id 431 (494)
..++++|.+. +.+..+++++|.+ |.++....... . .....+|+|++.++|++|||
T Consensus 294 ~~~i~~~~~~---~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 294 YPGTLNLSFA---YVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred cCCEEEEEeC---CCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 2459999984 3578899999965 66643221100 0 01368999999999998874
No 29
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=1.8e-30 Score=261.99 Aligned_cols=345 Identities=16% Similarity=0.112 Sum_probs=250.4
Q ss_pred cCCChHHHHHHHHHHhcccCCCCCC---C--hhhHHHHHHHHHHHHHHhCC-CCCCCCCcceeeecChhHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINKNYVDMDE---Y--PVTTELQNRCVNIIARLFNA-PLEDSETAVGVGTVGSSEAIMLAGLAFK 138 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~~~~~~~~---~--~~~~~le~~~~~~la~l~g~-~~~~~~~~~~~~t~ggt~a~~~a~~a~~ 138 (494)
+++.++.+.+++..+++....++.. + +....++ +.+..+++.+|. ++ ..+++|+|+|+++.+++.++.
T Consensus 8 ~~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~a~~~~~~~~~~~~~-----~~i~~t~g~teal~~~~~~~~ 81 (382)
T TIGR03403 8 TTMLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIA-EALDKLYKGINARDL-----DDIIITSCATESNNWVLKGVY 81 (382)
T ss_pred CCCCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHH-HHHHHHHHHcCcCCC-----CeEEEeCCHHHHHHHHHHHHH
Confidence 4456678999998888754333321 2 1333444 344555556666 33 358999999999998887663
Q ss_pred HHHHHHHHhcCCCCCCCeEEeCCCcchHHHHH---HHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCc
Q 011057 139 RKWQNKRKAEGKPFDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLN 215 (494)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~---~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~t 215 (494)
.... ....+++|+++..+|+++... ++..|++++.+|++++ +.+|+++|++++++++++|++++++|+|
T Consensus 82 ~~~~-------~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~-g~~d~~~l~~~i~~~t~lv~~~~~~n~t 153 (382)
T TIGR03403 82 FDEI-------LKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQ-GTITAEQVREAITEKTALVSVMWANNET 153 (382)
T ss_pred Hhhc-------ccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCC-CCCCHHHHHHhcccCCeEEEEEcccCCC
Confidence 2110 001124799999999876654 4567999999999865 7899999999999899999999999999
Q ss_pred ccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCC
Q 011057 216 GEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKED 295 (494)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~ 295 (494)
|.+.|+++|.++|+++ |+++|+|++++.+..++ ++...++|++++++||| ++|.|+|++++++...
T Consensus 154 G~~~~~~~I~~la~~~------g~~~ivD~a~~~g~~~~-------~~~~~~~D~~~~s~~K~-~gp~G~g~l~vr~~~~ 219 (382)
T TIGR03403 154 GMIFPIKEIGEICKER------GVLFHTDAVQAIGKIPV-------DVQKAGVDFLSFSAHKF-HGPKGVGGLYIRKGVE 219 (382)
T ss_pred ccccCHHHHHHHHHHc------CCEEEEechhhcCCCcc-------CccccCCCEEEEcchhh-CCCCceEEEEECCCCC
Confidence 9999999999999999 99999999998764432 33334799999999998 5799999999987532
Q ss_pred cccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-C-c
Q 011057 296 LPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-G-V 373 (494)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~-~ 373 (494)
+. +.+.++........++.+...++++..+++.+. +.++...++..++++++.++|+++++++++.+.. + .
T Consensus 220 ~~------p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~ 292 (382)
T TIGR03403 220 LT------PLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLAN-EYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVP 292 (382)
T ss_pred CC------CcccCCCCCCCcccCCcChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcC
Confidence 21 111111111111136666667777888887654 3467778899999999999999998898886532 2 3
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCC--C-----------C---CCceEEEEEeccCCChHHHHHHHHHH
Q 011057 374 PLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPA--D-----------A---QHITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 374 ~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~--~-----------~---~~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
++++|.+.+ ++..++.+.|.++||.++...... . . .....+|+|++.++|.+|+|+|++.|
T Consensus 293 ~~~~~~~~~---~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l 369 (382)
T TIGR03403 293 NTILISIKG---VEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVF 369 (382)
T ss_pred CEEEEEeCC---CCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHH
Confidence 577888743 567889989999999997421110 0 0 01357999999999999999999999
Q ss_pred HHHHHHHhcC
Q 011057 438 TKVLHELDSL 447 (494)
Q Consensus 438 ~~~~~~l~~~ 447 (494)
+++++.++..
T Consensus 370 ~~~~~~~~~~ 379 (382)
T TIGR03403 370 KKAVQRLRAI 379 (382)
T ss_pred HHHHHHHHhh
Confidence 9999887653
No 30
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=5.6e-31 Score=265.36 Aligned_cols=338 Identities=17% Similarity=0.144 Sum_probs=253.9
Q ss_pred CChHHHHHHHHHHhcccCCC--CCCCh---hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVD--MDEYP---VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKW 141 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~--~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~ 141 (494)
++++.+.+++.+++..+... +..++ ......+++++++++++|.+.. ..+++|+|+++++.+++.+...
T Consensus 11 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~----~~v~~~~g~t~al~~~~~~~~~-- 84 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSS----AHVVFTNNATTALNIALKGLLK-- 84 (376)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCC----CeEEEeCCHHHHHHHHHHhccC--
Confidence 44567888887777654321 22232 3346677899999999998641 2588999999999877665422
Q ss_pred HHHHHhcCCCCCCCeEEeCCCcchHHH----HHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCccc
Q 011057 142 QNKRKAEGKPFDKPNIVTGANVQVCWE----KFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGE 217 (494)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~~~~~h~s~~----~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~ 217 (494)
.+++|+++..+|.++. ..++..|++++.++.+++ +.+|++++++++++++++|++++++|+||.
T Consensus 85 -----------~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~ 152 (376)
T TIGR01977 85 -----------EGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNE-GLISPERIKRAIKTNTKLIVVSHASNVTGT 152 (376)
T ss_pred -----------CCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC-CCcCHHHHHHhcCCCCeEEEEECCCCCccc
Confidence 1368999998997754 456667999999998764 689999999999889999999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcc
Q 011057 218 FEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP 297 (494)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~ 297 (494)
+.|+++|.++|+++ ++++++|+|++.+..++ ++...++|++++++|||+++|.|+|++++++...+.
T Consensus 153 ~~~~~~i~~l~~~~------~~~livD~a~~~g~~~~-------~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~ 219 (376)
T TIGR01977 153 ILPIEEIGELAQEN------GIFFILDAAQTAGVIPI-------DMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLK 219 (376)
T ss_pred cCCHHHHHHHHHHc------CCEEEEEhhhccCccCC-------CchhcCCCEEEecccccccCCCCceEEEEcCCcCcC
Confidence 99999999999999 99999999999876543 333458999999999999999999999998765321
Q ss_pred cccccc----cCCCCC-C--CCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC
Q 011057 298 EELIFH----INYLGA-D--QPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKD 370 (494)
Q Consensus 298 ~~~~~~----~~y~~~-~--~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 370 (494)
...... ..+... . ...+. .++.+...++++.++++.+...|++.+.++..++++++.+.|+++++++++.+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~r~~-~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~ 298 (376)
T TIGR01977 220 PLKSGGTGSHSALIDQPSELPDRFE-SGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPA 298 (376)
T ss_pred ceecCCCccccccccccccchhhcc-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC
Confidence 111100 000000 0 00111 256667778888999999999999999999999999999999999889887642
Q ss_pred ---CCccEEEEEecCCCCCCHHHHHHHHHhc-CceeeccccCC-------CCCCceEEEEEeccCCChHHHHHHHHHHHH
Q 011057 371 ---EGVPLVAFSLKDNKRHDEFEVAELLRRF-GWIVPAYTMPA-------DAQHITVLRVVIREDFSRTLAERLVLDITK 439 (494)
Q Consensus 371 ---~~~~~v~f~~~~~~~~~~~~l~~~L~~~-Gi~v~~~~~~~-------~~~~~~~lRvs~~~~~t~~~id~~i~~l~~ 439 (494)
...++++|.+.+ .+..++.+.|.++ |+.+.....-. .......+|++++.++|.+|++++++.|++
T Consensus 299 ~~~~~~~~v~~~~~~---~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 299 DPANRVGVVSFTVEG---IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred CccccCCeEEEEECC---CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 146788888743 4778999999988 98875422110 011345799999999999999999988875
No 31
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=2.3e-30 Score=263.28 Aligned_cols=346 Identities=18% Similarity=0.116 Sum_probs=254.2
Q ss_pred CCChHHHHHHHHHHhcccCCCCC-----CChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 011057 66 TWMEPECDKLMMAAINKNYVDMD-----EYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRK 140 (494)
Q Consensus 66 ~~~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~ 140 (494)
+++++.+.+++.+++.....+.. ..+...+..+++++.+++++|.+.. ..+++|+|+++++.+++.++...
T Consensus 28 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~----~~v~~~~g~t~~l~~~~~~~~~~ 103 (403)
T TIGR01979 28 SQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD----EEIVFTRGTTESINLVAYSWGDS 103 (403)
T ss_pred cCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC----CeEEEeCCHHHHHHHHHHHhhhh
Confidence 34556678888777654322211 1223445666889999999999731 34899999999988777665321
Q ss_pred HHHHHHhcCCCCCCCeEEeCCCcchH----HHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcc
Q 011057 141 WQNKRKAEGKPFDKPNIVTGANVQVC----WEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNG 216 (494)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG 216 (494)
.. ..+++|+++..+|.+ +..+++..|++++.++++++ +.+|+++++++++++|++|++++++|+||
T Consensus 104 ~~---------~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~i~~~~~lv~~~~~~~~tG 173 (403)
T TIGR01979 104 NL---------KAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDD-GTLDLDDLEKLLTEKTKLVAITHVSNVLG 173 (403)
T ss_pred cC---------CCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCC-CCCCHHHHHHHhccCCeEEEEEccccccc
Confidence 00 013689999998875 44667788999999998864 78999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCc
Q 011057 217 EFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDL 296 (494)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~ 296 (494)
.+.|+++|+++|+++ |+++++|++|+.+..++ ++...++|++++++||++ +|.|+|+++++++ .+
T Consensus 174 ~~~~~~~i~~~~~~~------~~~~ivD~a~~~g~~~~-------~~~~~~~d~~~~s~~K~~-gp~G~g~l~~~~~-~~ 238 (403)
T TIGR01979 174 TVNPVEEIAKLAHQV------GAKVLVDGAQAVPHMPV-------DVQALDCDFYVFSGHKMY-GPTGIGVLYGKEE-LL 238 (403)
T ss_pred ccCCHHHHHHHHHHc------CCEEEEEchhhcCcccc-------CccccCCCEEEEeccccc-CCCCceEEEEchH-HH
Confidence 999999999999999 99999999998765432 333346999999999975 6889999988754 22
Q ss_pred ccccccccCC-----C---C----CCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCe
Q 011057 297 PEELIFHINY-----L---G----ADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRF 364 (494)
Q Consensus 297 ~~~~~~~~~y-----~---~----~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 364 (494)
....+....+ . . .....+. .++++...++++.++++.+...|++++.++..++++++.++|++++++
T Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~ 317 (403)
T TIGR01979 239 EQMPPFLGGGEMIAEVSFEETTYNEAPHKFE-AGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGL 317 (403)
T ss_pred hcCCCeecCCCceeecccCccccCCChhhcC-CCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 1110000000 0 0 0000111 256767778888999988877788899999999999999999999889
Q ss_pred EEeecCC---CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCC-----CCCCceEEEEEeccCCChHHHHHHHHH
Q 011057 365 NIVSKDE---GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPA-----DAQHITVLRVVIREDFSRTLAERLVLD 436 (494)
Q Consensus 365 ~~~~~~~---~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~-----~~~~~~~lRvs~~~~~t~~~id~~i~~ 436 (494)
+++.+.. +.++++|.+.+ .+..++.+.|.++||.++...... ......++|+|++.++|.+|+++|++.
T Consensus 318 ~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~ 394 (403)
T TIGR01979 318 RIYGPRDAEDRGGIISFNVEG---VHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEA 394 (403)
T ss_pred EEeCCCCccccCceEEEEeCC---cCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHH
Confidence 9886531 46799998743 456789999999999885421100 001135799999999999999999999
Q ss_pred HHHHHHHH
Q 011057 437 ITKVLHEL 444 (494)
Q Consensus 437 l~~~~~~l 444 (494)
|+++++.+
T Consensus 395 l~~~~~~~ 402 (403)
T TIGR01979 395 LKKVRKFF 402 (403)
T ss_pred HHHHHHHh
Confidence 99887765
No 32
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=1.9e-30 Score=265.18 Aligned_cols=349 Identities=17% Similarity=0.102 Sum_probs=256.7
Q ss_pred cCCChHHHHHHHHHHhcccCCCC---CCC--hhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINKNYVDM---DEY--PVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKR 139 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~~~~~~---~~~--~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~ 139 (494)
+++.++.+.+++.+++.....+. ..+ ....+..+++++.+++++|.+.. ..+++|+|+|+++.+++.....
T Consensus 41 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~----~~v~~t~g~t~al~~i~~~~~~ 116 (424)
T PLN02855 41 TSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTS----REIVFTRNATEAINLVAYTWGL 116 (424)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCC----CEEEEeCCHHHHHHHHHHHhhh
Confidence 33555668888877765432221 111 23345567889999999999531 3599999999999877665311
Q ss_pred HHHHHHHhcCCCCCCCeEEeCCCcchH----HHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCc
Q 011057 140 KWQNKRKAEGKPFDKPNIVTGANVQVC----WEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLN 215 (494)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~t 215 (494)
.. . ..+++|+++...|++ +...++..|++++.++++++ +.+|+++++++++++|++|++++++|+|
T Consensus 117 ~~--------~-~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~-~~~~~~~l~~~i~~~t~lv~i~~~~n~t 186 (424)
T PLN02855 117 AN--------L-KPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD-EVLDVEQLKELLSEKTKLVATHHVSNVL 186 (424)
T ss_pred hc--------C-CCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC-CCcCHHHHHHHhccCceEEEEeCccccc
Confidence 00 0 012589999998875 45567788999999998764 5699999999999999999999999999
Q ss_pred ccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCC
Q 011057 216 GEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKED 295 (494)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~ 295 (494)
|.+.|+++|+++|+++ ++++++|++|+.+..++ ++...++|++++++||+ ++|.|+|++++++. .
T Consensus 187 G~~~~~~~I~~l~~~~------g~~vivD~a~~~g~~~~-------~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~-~ 251 (424)
T PLN02855 187 GSILPVEDIVHWAHAV------GAKVLVDACQSVPHMPV-------DVQTLGADFLVASSHKM-CGPTGIGFLWGKSD-L 251 (424)
T ss_pred cccCCHHHHHHHHHHc------CCEEEEEhhhhcCCcCC-------CchhcCCCEEEeecccc-cCCCccEEEEEchh-h
Confidence 9999999999999999 99999999998664432 33334689999999995 67889999998764 2
Q ss_pred cccccccccC-------CCCC-----CCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCC
Q 011057 296 LPEELIFHIN-------YLGA-----DQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGR 363 (494)
Q Consensus 296 ~~~~~~~~~~-------y~~~-----~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (494)
+...-+.... |... ....+. .||++...++++.++++.+...|++++.++..++++++++.|+++++
T Consensus 252 ~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e-~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g 330 (424)
T PLN02855 252 LESMPPFLGGGEMISDVFLDHSTYAPPPSRFE-AGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPG 330 (424)
T ss_pred hhcCCCEecCCCceeeeecCccccCCChhhcc-CCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 2111011000 0000 011122 36777788889999999888889999999999999999999999988
Q ss_pred eEEeecC-----CCccEEEEEecCCCCCCHHHHHHHHHhc-CceeeccccCCC-----CCCceEEEEEeccCCChHHHHH
Q 011057 364 FNIVSKD-----EGVPLVAFSLKDNKRHDEFEVAELLRRF-GWIVPAYTMPAD-----AQHITVLRVVIREDFSRTLAER 432 (494)
Q Consensus 364 ~~~~~~~-----~~~~~v~f~~~~~~~~~~~~l~~~L~~~-Gi~v~~~~~~~~-----~~~~~~lRvs~~~~~t~~~id~ 432 (494)
++++.+. .+.++++|.+++ .+..++.+.|.++ ||.++....... ..-...+|+|++.++|.+|+++
T Consensus 331 ~~i~~~~~~~~~~r~~~v~~~~~~---~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~ 407 (424)
T PLN02855 331 VRIYGPKPSEGVGRAALCAFNVEG---IHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDA 407 (424)
T ss_pred EEEeCCCcccccCcccEEEEEECC---cCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHH
Confidence 9988642 246799999853 4677899999887 998764321100 0112469999999999999999
Q ss_pred HHHHHHHHHHHHhc
Q 011057 433 LVLDITKVLHELDS 446 (494)
Q Consensus 433 ~i~~l~~~~~~l~~ 446 (494)
|++.|++++..++.
T Consensus 408 l~~~l~~~~~~~~~ 421 (424)
T PLN02855 408 FIHALKDTIAFFSS 421 (424)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999877654
No 33
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=1.5e-30 Score=261.83 Aligned_cols=337 Identities=19% Similarity=0.138 Sum_probs=249.6
Q ss_pred CChHHHHHHHHHHhcccCCC-----CCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVD-----MDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKW 141 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~ 141 (494)
++++.+.+++.+.+.....+ +..++...+...++++++++++|.+.. ..+++|+|+|+++.+++.++....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~----~~v~~~~g~t~a~~~~~~~l~~~~ 85 (373)
T cd06453 10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSP----DEIIFTRNTTEAINLVAYGLGRAN 85 (373)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC----CeEEEeCCHHHHHHHHHHHhhhcC
Confidence 44566777777776443222 122345677778899999999998721 348899999999998888774310
Q ss_pred HHHHHhcCCCCCCCeEEeCCCcchHH----HHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCccc
Q 011057 142 QNKRKAEGKPFDKPNIVTGANVQVCW----EKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGE 217 (494)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~~~~~h~s~----~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~ 217 (494)
..+++|++++.+|++. ...++..|++++.|+++++ +.+|++++++++.+++++|++++++|+||.
T Consensus 86 ----------~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~ 154 (373)
T cd06453 86 ----------KPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDD-GQLDLEALEKLLTERTKLVAVTHVSNVLGT 154 (373)
T ss_pred ----------CCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCC-CCcCHHHHHHHhcCCceEEEEeCcccccCC
Confidence 0136899999999874 4566678999999999864 789999999999989999999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcc
Q 011057 218 FEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP 297 (494)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~ 297 (494)
+.|+++|.++|+++ ++++|+|++|+.+..++ ++...++|++++++|||+.+ .|+|++++++. .+.
T Consensus 155 ~~~~~~i~~~~~~~------~~~li~D~a~~~~~~~~-------~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~-~~~ 219 (373)
T cd06453 155 INPVKEIGEIAHEA------GVPVLVDGAQSAGHMPV-------DVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEE-LLE 219 (373)
T ss_pred cCCHHHHHHHHHHc------CCEEEEEhhhhcCceee-------eccccCCCEEEeccccccCC-CCcEEEEEchH-Hhh
Confidence 99999999999999 99999999998765433 22234789999999999876 78999888654 221
Q ss_pred cccccccCCC-------CC-C----CCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE
Q 011057 298 EELIFHINYL-------GA-D----QPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN 365 (494)
Q Consensus 298 ~~~~~~~~y~-------~~-~----~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (494)
........+. .. . ...+. .++.+...+++++++++.+..+|++++.++..++++++.+.|+++++++
T Consensus 220 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~ 298 (373)
T cd06453 220 EMPPYGGGGEMIEEVSFEETTYADLPHKFE-AGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVR 298 (373)
T ss_pred cCCCeecCCCccccccccccccCCCccccC-CCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 1111100000 00 0 00111 2456667788999999999988999999999999999999999998899
Q ss_pred EeecC-CCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCC-----CCCceEEEEEeccCCChHHHHHHHHHH
Q 011057 366 IVSKD-EGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPAD-----AQHITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 366 ~~~~~-~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~-----~~~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
++.++ ...++++|.++. .+..++.++|.++||.+........ ......+|+|++..+|.+|+|+|++.|
T Consensus 299 ~~~~~~~~~~~~~~~~~~---~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 299 VYGDAEDRAGVVSFNLEG---IHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred EeCCccccCCeEEEEECC---cCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 87543 246788888743 4678999999999998753221100 111357999999999999999998764
No 34
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=1e-30 Score=265.29 Aligned_cols=338 Identities=15% Similarity=0.097 Sum_probs=246.0
Q ss_pred cCCChHHHHHHHHHHhcccCCC----CCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINKNYVD----MDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRK 140 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~~~~~----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~ 140 (494)
++++++.+.+++.+++.....+ +....+..++.+++++.+++++|.+. ..+++++|+++++...+.+....
T Consensus 26 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~-----~~v~~~~~~t~~l~~~~~~~~~~ 100 (397)
T TIGR01976 26 GTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADP-----PEVVFGANATSLTFLLSRAISRR 100 (397)
T ss_pred cCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCC-----CeEEEeCCHHHHHHHHHHHHHhc
Confidence 4455677888888777543222 22223455677889999999999875 24888999999987666555221
Q ss_pred HHHHHHhcCCCCCCCeEEeCCCcchHH----HHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcc
Q 011057 141 WQNKRKAEGKPFDKPNIVTGANVQVCW----EKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNG 216 (494)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~~~h~s~----~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG 216 (494)
+ ..+++|+++++.|++. ...++..|++++.++++++++.+|+++++++++++|++|++++++|+||
T Consensus 101 ~----------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG 170 (397)
T TIGR01976 101 W----------GPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLG 170 (397)
T ss_pred C----------CCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCC
Confidence 1 0135899999998764 3567788999999998763478999999999998999999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCc
Q 011057 217 EFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDL 296 (494)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~ 296 (494)
.+.|+++|+++|+++ |+++++|++|+.+..++ ++...++|++++++|||++ | ++|+++++++ .+
T Consensus 171 ~~~~~~~i~~~~~~~------~~~~ivD~a~~~~~~~~-------~~~~~~~d~~~~s~~K~~g-~-~~G~l~~~~~-~~ 234 (397)
T TIGR01976 171 SIVDLAAITELVHAA------GALVVVDAVHYAPHGLI-------DVQATGADFLTCSAYKFFG-P-HMGILWGRPE-LL 234 (397)
T ss_pred ccCCHHHHHHHHHHc------CCEEEEehhhhccccCC-------CHHHcCCCEEEEechhhcC-C-ceEEEEEcHH-HH
Confidence 999999999999999 99999999997643321 2323478999999999974 4 4898887654 22
Q ss_pred ccccccccCCCCCC-CCCcccccCcchHHHHHHHHHHHHhcHhH--------------HHHHHHHHHHHHHHHHHHHhhC
Q 011057 297 PEELIFHINYLGAD-QPTFTLNFSKGSSQVIAQYYQLIRLGFEG--------------YRNVMENCHENAMVLKEGLEKT 361 (494)
Q Consensus 297 ~~~~~~~~~y~~~~-~~~~~~~~s~~~~~~~a~~~al~~l~~~g--------------~~~~~~~~~~~a~~l~~~L~~~ 361 (494)
.........|.... ...+. .|+++...++++.++++.+...| +++..++..+++++++++|+++
T Consensus 235 ~~l~~~~~~~~~~~~~~~~~-~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~ 313 (397)
T TIGR01976 235 MNLPPYKLTFSYDTGPERFE-LGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDL 313 (397)
T ss_pred hhCCCccccCccCCCcchhc-CCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11111112222111 11111 36777777888888888775443 5677888889999999999999
Q ss_pred CCeEEeec---CCCccEEEEEecCCCCCCHHHHHHHHHhcCceeecccc--------CCCCCCceEEEEEeccCCChHHH
Q 011057 362 GRFNIVSK---DEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTM--------PADAQHITVLRVVIREDFSRTLA 430 (494)
Q Consensus 362 ~~~~~~~~---~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~--------~~~~~~~~~lRvs~~~~~t~~~i 430 (494)
++++++.+ ....+++.|.+.+ .+..++.++|.++||.++.... +.......++|+|++.++|++|+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di 390 (397)
T TIGR01976 314 PGVTLYGVARLAARVPTVSFTVHG---LPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEV 390 (397)
T ss_pred CCEEEeCCCCccCCCceEEEEeCC---cCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHH
Confidence 88998765 1257888888743 4677899999999999875421 11112345799999999999999
Q ss_pred HHHHHHH
Q 011057 431 ERLVLDI 437 (494)
Q Consensus 431 d~~i~~l 437 (494)
++|++.|
T Consensus 391 ~~l~~~l 397 (397)
T TIGR01976 391 DRLLEAL 397 (397)
T ss_pred HHHHHhC
Confidence 9988754
No 35
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=3.9e-30 Score=259.53 Aligned_cols=341 Identities=13% Similarity=0.091 Sum_probs=249.4
Q ss_pred cCCChHHHHHHHHHHhcccCCCCC----CChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINKNYVDMD----EYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRK 140 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~ 140 (494)
++++++.+.+++.+++.....++. .......+.+++++.+++++|.++ ..+++|+|+++++..++.++...
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~-----~~i~~~~g~t~a~~~~~~~~~~~ 83 (381)
T PRK02948 9 TTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEE-----QGIYFTSGGTESNYLAIQSLLNA 83 (381)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEeCcHHHHHHHHHHHHHHh
Confidence 345567788888877764333222 223455777889999999999875 35889999999999888777432
Q ss_pred HHHHHHhcCCCCCCCeEEeCCCcchHHHHH---HHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCccc
Q 011057 141 WQNKRKAEGKPFDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGE 217 (494)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~---~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~ 217 (494)
. ...+++|+++..+|+++... ++..|++++.++++++ +.+|+++|++++.+++++|++++++|+||.
T Consensus 84 ~---------~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~ 153 (381)
T PRK02948 84 L---------PQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKS-GLIRLVDLERAITPDTVLASIQHANSEIGT 153 (381)
T ss_pred c---------cCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCC-CCCCHHHHHHhcCCCCEEEEEECCcCCcEe
Confidence 1 01135799999999876554 4567999999998864 789999999999888999999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcc
Q 011057 218 FEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP 297 (494)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~ 297 (494)
+.|+++|.++|+++ ++++|||++++.+..++ ++...++|+++.++||++ +|.|+|++++++...+.
T Consensus 154 ~~~~~~I~~l~~~~------~~~vivD~~~~~g~~~~-------~~~~~~~d~~~~s~~K~~-gp~G~G~l~~~~~~~~~ 219 (381)
T PRK02948 154 IQPIAEIGALLKKY------NVLFHSDCVQTFGKLPI-------DVFEMGIDSLSVSAHKIY-GPKGVGAVYINPQVRWK 219 (381)
T ss_pred ehhHHHHHHHHHHc------CCEEEEEChhhcccccc-------CcccCCCCEEEecHHhcC-CCCcEEEEEEcCCCCCC
Confidence 99999999999999 99999999987654332 233347999999999975 68899999987642111
Q ss_pred cccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC--C-C-c
Q 011057 298 EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKD--E-G-V 373 (494)
Q Consensus 298 ~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~-~-~ 373 (494)
. ...+.........++.+...++++.++++.+. ++.++..++..++++++.++|++++ +++.... . . .
T Consensus 220 ~------~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~-~~v~~~~~~~~~~~ 291 (381)
T PRK02948 220 P------VFPGTTHEKGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTLP-LPIEVEGHSTSCLP 291 (381)
T ss_pred C------cccCCCCCCCcCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEeCCCccCcC
Confidence 1 01111111111235666677777778887654 3567888999999999999999986 6554321 1 2 2
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHhcCceeecccc-------CC---------CCCCceEEEEEeccCCChHHHHHHHHHH
Q 011057 374 PLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTM-------PA---------DAQHITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 374 ~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~-------~~---------~~~~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
.++.|.+.+ ++..++...|.++||.++.... |+ ......++|+|++.++|++|++++++.|
T Consensus 292 ~i~~~~~~~---~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l 368 (381)
T PRK02948 292 HIIGVTIKG---IEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHAL 368 (381)
T ss_pred CEEEEEeCC---CCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHH
Confidence 366777643 4677888899999999874331 10 0112468999999999999999999999
Q ss_pred HHHHHHHh
Q 011057 438 TKVLHELD 445 (494)
Q Consensus 438 ~~~~~~l~ 445 (494)
+++++.+-
T Consensus 369 ~~~~~~~~ 376 (381)
T PRK02948 369 ETIGNQFY 376 (381)
T ss_pred HHHHHHHh
Confidence 99877654
No 36
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=4.2e-30 Score=260.66 Aligned_cols=343 Identities=17% Similarity=0.109 Sum_probs=247.3
Q ss_pred cCCChHHHHHHHHHHhcccCCCCCC--C---hhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINKNYVDMDE--Y---PVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKR 139 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~~~~~~~~--~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~ 139 (494)
+++.++.+.+++..++.....++.. + ....+..+++++.+++++|.++ ..+++|+|+|+++.+++.++..
T Consensus 12 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~-----~~v~~~~g~t~a~~~~l~~l~~ 86 (402)
T TIGR02006 12 TTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADS-----REIVFTSGATESNNLAIKGIAH 86 (402)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEeCCHHHHHHHHHHHHHH
Confidence 3456677888887777544333221 1 1223566678999999999875 3489999999999988776643
Q ss_pred HHHHHHHhcCCCCCCCeEEeCCCcchHHHHHH---HHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcc
Q 011057 140 KWQNKRKAEGKPFDKPNIVTGANVQVCWEKFA---RYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNG 216 (494)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~---~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG 216 (494)
... ..+++|+++..+|.++..++ +..|++++.++++++ +.+|+++|++++.+++++|++++++|+||
T Consensus 87 ~~~---------~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~lv~v~~~~n~tG 156 (402)
T TIGR02006 87 FYK---------SKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSN-GLIDLEELKAAIRDDTILVSIMHVNNEIG 156 (402)
T ss_pred hhc---------CCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCC-CcCCHHHHHHhcCCCCEEEEEECCCcCce
Confidence 110 01358999999999876654 345999999998864 78999999999998999999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCc
Q 011057 217 EFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDL 296 (494)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~ 296 (494)
.+.|+++|.++|+++ |+++|||++++.+..++ ++...++|++++++||++ +|.|+|+++++++...
T Consensus 157 ~~~~~~~I~~l~~~~------g~~livD~a~a~g~~~~-------~~~~~~~D~~~~s~~K~~-gp~G~G~l~~~~~~~~ 222 (402)
T TIGR02006 157 VIQDIAAIGEICRER------KVFFHVDAAQSVGKIPI-------NVNELKVDLMSISGHKIY-GPKGIGALYVRRKPRV 222 (402)
T ss_pred ecccHHHHHHHHHHc------CCEEEEEcchhcCCccc-------CccccCCCEEEEehhhhc-CCCceEEEEEccCCCC
Confidence 999999999999999 99999999998876543 333347999999999964 7999999999865332
Q ss_pred ccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-Ccc-
Q 011057 297 PEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GVP- 374 (494)
Q Consensus 297 ~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~- 374 (494)
. ..+.+.++........++.+...++++..+++.+. ++++++.++..++++++.+.|++++++++..+.. +.+
T Consensus 223 -~---~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~ 297 (402)
T TIGR02006 223 -R---LEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPG 297 (402)
T ss_pred -C---CCceecCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCC
Confidence 1 11111111111111236777777888888888775 4678888999999999999999988888775432 232
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCC----------------CCCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 375 LVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPAD----------------AQHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~----------------~~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
++.+.+.. .+.+++...| +++.+++...... .....++|+|++.++|.+|+|+|++.|+
T Consensus 298 ~~~v~f~~---~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~ 372 (402)
T TIGR02006 298 NLNVSFNY---VEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVK 372 (402)
T ss_pred eEEEEEeC---cCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHH
Confidence 33344432 2455676666 3665532211100 0113689999999999999999999999
Q ss_pred HHHHHHhc
Q 011057 439 KVLHELDS 446 (494)
Q Consensus 439 ~~~~~l~~ 446 (494)
++++.++.
T Consensus 373 ~~~~~~~~ 380 (402)
T TIGR02006 373 SAIDKLRE 380 (402)
T ss_pred HHHHHHHh
Confidence 99988765
No 37
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=3.6e-30 Score=258.70 Aligned_cols=335 Identities=19% Similarity=0.134 Sum_probs=252.5
Q ss_pred cCCChHHHHHHHHHHhcccCC-----CCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINKNYV-----DMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKR 139 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~ 139 (494)
+++.++.+.+++.+.+..... .+..+....++.+++++.+++++|.+++ ..+++++++|+++..++..+..
T Consensus 8 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~----~~v~~~~~~t~a~~~~~~~l~~ 83 (371)
T PF00266_consen 8 TGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPD----EEVVFTSNGTEALNAVASSLLN 83 (371)
T ss_dssp S-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTT----EEEEEESSHHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccc----cccccccccchhhhhhhhcccc
Confidence 335566788888777654222 2233456778888999999999999862 3588999999999988888754
Q ss_pred HHHHHHHhcCCCCCCCeEEeCCCcchHHH----HHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCc
Q 011057 140 KWQNKRKAEGKPFDKPNIVTGANVQVCWE----KFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLN 215 (494)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s~~----~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~t 215 (494)
.+. .+++|+++...|++.. ..++..|++++.++.+.+ +.+|+++++++|++++++|++++.+|.+
T Consensus 84 ~~~----------~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~-~~~~~~~~~~~l~~~~~lv~~~~~~~~t 152 (371)
T PF00266_consen 84 PLK----------PGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG-GSLDLEDLEEALNPDTRLVSISHVENST 152 (371)
T ss_dssp HGT----------TTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT-SSCSHHHHHHHHHTTESEEEEESBETTT
T ss_pred ccc----------cccccccccccccccccccccccccchhhhcccccccc-chhhhhhhhhhhccccceEEeecccccc
Confidence 321 1258999999998655 455678999999999865 6899999999999999999999999999
Q ss_pred ccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCC
Q 011057 216 GEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKED 295 (494)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~ 295 (494)
|.+.|+++|+++||++ +++++||++++.+..++ ++...++|++++++|| +++|.|+|+++++++.
T Consensus 153 G~~~pi~~I~~~~~~~------~~~~~vD~~~~~g~~~i-------d~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~- 217 (371)
T PF00266_consen 153 GVRNPIEEIAKLAHEY------GALLVVDAAQSAGCVPI-------DLDELGADFLVFSSHK-LGGPPGLGFLYVRPEA- 217 (371)
T ss_dssp TBBSSHHHHHHHHHHT------TSEEEEE-TTTTTTSS---------TTTTTESEEEEESTS-TTSSSTEEEEEEEHHH-
T ss_pred cEEeeeceehhhhhcc------CCceeEechhccccccc-------cccccccceeeecccc-cCCCCchhhheehhhh-
Confidence 9999999999999999 99999999999887654 4555589999999999 8899999999998742
Q ss_pred cccccccccCCCC------------CCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCC
Q 011057 296 LPEELIFHINYLG------------ADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGR 363 (494)
Q Consensus 296 ~~~~~~~~~~y~~------------~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (494)
+....+....+.. .....+. .||.+...++++..+++.+.+.|++++.++..++++++.+.|.++++
T Consensus 218 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~ 296 (371)
T PF00266_consen 218 IERLRPAKPGGGYLDFPSLQEYGLADDARRFE-GGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPG 296 (371)
T ss_dssp HHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSS-SSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhccccccccccccccccchhccccccccccc-ccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCc
Confidence 1111111111110 0011111 36787788889999999998889999999999999999999999998
Q ss_pred eEEeec---CCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCC-----CCCceEEEEEeccCCChHHHHHH
Q 011057 364 FNIVSK---DEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPAD-----AQHITVLRVVIREDFSRTLAERL 433 (494)
Q Consensus 364 ~~~~~~---~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~-----~~~~~~lRvs~~~~~t~~~id~~ 433 (494)
++++.+ ..+.++++|.+.+ .+..++.+.|.++||.+........ ..-..++|+|++.++|.+|||+|
T Consensus 297 ~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 297 IEVLGPDDEPRRPSIVSFNLPG---SDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EEESSSSCGGBGTTEEEEEETT---SSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred eeEeeecccccccceEEEeecC---CCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 888663 2267899999843 5789999999999999865221110 00125799999999999999875
No 38
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.98 E-value=2e-29 Score=238.98 Aligned_cols=399 Identities=15% Similarity=0.100 Sum_probs=283.6
Q ss_pred CCCCHHHHHHHHHHhhhhcC---CCCCcccccccCCChHHHHHHH---HHHhcccCCCC-CCChhhHHHHHHHHHHHHHH
Q 011057 35 NSIPKEAAYQIINDELMLDG---NPRLNLASFVTTWMEPECDKLM---MAAINKNYVDM-DEYPVTTELQNRCVNIIARL 107 (494)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~---~~~~~~~~~~~-~~~~~~~~le~~~~~~la~l 107 (494)
...++-++.+++.++-..+- +..+.|+| ||....|.+.+.. ..+.+..++.+ +..+++.++..++.+||+++
T Consensus 43 Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGS-CTMK~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l~li~~Lq~~L~~I 121 (496)
T COG1003 43 PEHSETEMVRHYTRLSQKDLAVDRGMIPLGS-CTMKLNPKAEMKPATWPEFANIHPFQPEEQVQGYLELIYELQEWLKEI 121 (496)
T ss_pred ccccHHHHHHHHHHHHhcccccccCccCCcc-cccccCchhhcccccccchhhcCCCCChHHHHHHHHHHHHHHHHHHHh
Confidence 34678888988877654321 11122333 4444445433222 12233344433 34569999999999999999
Q ss_pred hCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCc
Q 011057 108 FNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGY 187 (494)
Q Consensus 108 ~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~ 187 (494)
.|++. ..+..+.|+++-+.++++.+.....+ |. ..+.++++|+.+|......|.+.|.+|+.|+++++
T Consensus 122 TG~Da------vsLQP~AGAqGE~aGll~Ir~YHe~r----G~-~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~- 189 (496)
T COG1003 122 TGMDA------VSLQPNAGAQGEYAGLLAIRAYHESR----GE-GHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDEN- 189 (496)
T ss_pred cCCce------eeccCCCCcchhhHHHHHHHHHHHHc----CC-CcCcEEEeeccccCCChhhHhhcCceEEEEecCCC-
Confidence 99985 45666789999999999988765443 21 24568999999999999999999999999999986
Q ss_pred cccCHHHHHHhhhhCCeEEEEeeCCCCccccc-CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCC
Q 011057 188 YVMDPVKAVEMVDENTICVAAILGSTLNGEFE-DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLP 266 (494)
Q Consensus 188 ~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~-~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (494)
+.+|+++|++++.+++.++.+|+|||- |.++ +|.+|+++.|++ |..|+.|||....++....| +..
T Consensus 190 G~VDlddLk~k~~~~~AalMiTnPsT~-GvFE~~I~ei~~ivH~~------Gg~vY~DGANlNA~vG~~rP------Gd~ 256 (496)
T COG1003 190 GNVDLDDLRAKAEDNLAALMITNPSTL-GVFEEDIREICEIVHEA------GGQVYYDGANLNAIVGLARP------GDM 256 (496)
T ss_pred CCccHHHHHHHhccceeEEEeccCccc-ccchhhHHHHHHHHHHc------CCEEEecCcchhhhhccccc------ccc
Confidence 799999999999999999999999987 8884 699999999999 99999999998766554444 234
Q ss_pred CceEEEEcCcccCCcCC-----ceEEEEEeCCCCcccccccc------cCCCCC-CCC-Cc--ccccCcchHHHHHHHHH
Q 011057 267 LVKSINVSGHKYGLVYA-----GIGWVIWRNKEDLPEELIFH------INYLGA-DQP-TF--TLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 267 ~~D~~~~~~hK~l~~p~-----g~G~~~~~~~~~~~~~~~~~------~~y~~~-~~~-~~--~~~~s~~~~~~~a~~~a 331 (494)
++|++.++.||+++.|- |.|-+.++. .+...++.. ..|... ... .. .-....+.......|+.
T Consensus 257 G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~--~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~Y 334 (496)
T COG1003 257 GFDVVHLNLHKTFCIPHGGGGPGAGPVGVKA--HLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAY 334 (496)
T ss_pred ccceEEeecccccccCCCCCCCCCCceehHh--hccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHH
Confidence 89999999999987764 456666654 343433321 111111 011 00 00111222445678999
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC--CccEEEEEec---CCCCCCHHHHHHHHHhcCceeeccc
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE--GVPLVAFSLK---DNKRHDEFEVAELLRRFGWIVPAYT 406 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~--~~~~v~f~~~---~~~~~~~~~l~~~L~~~Gi~v~~~~ 406 (494)
++.+|.+|+++..+...-+++|+..+|+.. +++...+. ...-+.+... ...++...+++++|.+.|+..++..
T Consensus 335 I~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~ 412 (496)
T COG1003 335 IRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMY 412 (496)
T ss_pred HHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCccc
Confidence 999999999999999999999999999874 77765543 1223333332 2247889999999999999999988
Q ss_pred cCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhcCccccccccccccCccCcccc
Q 011057 407 MPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLPSKVLVPASEQNGRNGKKTE 467 (494)
Q Consensus 407 ~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 467 (494)
+|-...+.-+ |--++.-+.+++|+|+++|..+.++.++.+.+ ....++...++|+..
T Consensus 413 FPliV~~tLM--IEPTEsEsk~eLDrf~dami~I~~Ea~~~~~~--~~~~~P~~~a~~r~~ 469 (496)
T COG1003 413 FPLIVAGTLM--IEPTESESKEELDRFIDAMIAIREEADAVPAG--PLKDNPLNTAPHRLD 469 (496)
T ss_pred Ccccccccee--ecCCCCCCHHHHHHHHHHHHHHHHHHHhccCC--ccccCcccCCcchHH
Confidence 8854455434 44456668999999999999999999998755 222333444444433
No 39
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.97 E-value=5e-29 Score=256.43 Aligned_cols=376 Identities=17% Similarity=0.131 Sum_probs=252.1
Q ss_pred hHHhhcCCCCCCCCCCCCHHHHHHHHHHhhhhcCC---CCCcccccccCCChHH-HHHHHHH--Hhcc-cCCCCCCChhh
Q 011057 21 RYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGN---PRLNLASFVTTWMEPE-CDKLMMA--AINK-NYVDMDEYPVT 93 (494)
Q Consensus 21 ~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~-~~~~~~~--~~~~-~~~~~~~~~~~ 93 (494)
..++...+. ++|+.+ +..++++.+.+....+.. ...+++.+.++...|. +.+.... .+.. ++......++.
T Consensus 33 ~~~~~~~~~-~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~y~~~~~~~~~g~ 110 (447)
T PRK00451 33 EELRLKRPL-DLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSEFYTAYTPYQPEISQGT 110 (447)
T ss_pred HHHHhCCCC-CCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhchhHHHhcCCCCCccchHH
Confidence 334444444 788865 999999998887643311 1223455555544453 3333211 1111 12222346677
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHH
Q 011057 94 TELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARY 173 (494)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~ 173 (494)
.+...+..+++++++|++. ..+.+|+|||+++..++.+.... .+++|++++..|+++..+++.
T Consensus 111 ~~~~~e~~~~la~l~g~~~-----~~v~~~~g~t~~~~~~~~a~~~~------------~g~~Vlv~~~~~~~~~~~~~~ 173 (447)
T PRK00451 111 LQAIFEYQTMICELTGMDV-----ANASMYDGATALAEAALMAVRIT------------KRKKVLVSGAVHPEYREVLKT 173 (447)
T ss_pred HHHHHHHHHHHHHHhCCCc-----ceEEecCcHHHHHHHHHHHHHhc------------CCCEEEEeCccCHHHHHHHHH
Confidence 7778888899999999986 34889999998877655554211 126899999999988877654
Q ss_pred ----cCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEE--eccc
Q 011057 174 ----FEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHV--DAAS 247 (494)
Q Consensus 174 ----~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v--D~a~ 247 (494)
.|++++.++++++ .+|+++|+++++++|++|+++++ |+||.++|+++|+++|+++ |+|++| |.+.
T Consensus 174 ~~~~~G~~~~~v~~~~~--~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~------~~~~iv~~d~~~ 244 (447)
T PRK00451 174 YLKGQGIEVVEVPYEDG--VTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAG------GALFIVGVDPVS 244 (447)
T ss_pred HHHhCCcEEEEecCCCC--CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHC------CCEEEEEcChHH
Confidence 6999999998764 79999999999999999999998 7899999999999999999 999998 6443
Q ss_pred ccccccccCCcccccccCCCceEEEEcCccc----CCcCCceEEEEEeCCCCcccccccc-----------cCCC-----
Q 011057 248 GGFIAPFLYPELEWDFRLPLVKSINVSGHKY----GLVYAGIGWVIWRNKEDLPEELIFH-----------INYL----- 307 (494)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~----l~~p~g~G~~~~~~~~~~~~~~~~~-----------~~y~----- 307 (494)
.+. . .. ....++|++++++||| .++++|+|+++++++ .+.. ++.. ..|.
T Consensus 245 ~g~-~---~~-----~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~~~ 313 (447)
T PRK00451 245 LGL-L---KP-----PGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKK-LVRQ-MPGRLVGETVDADGKRGFVLTLQA 313 (447)
T ss_pred hcc-C---CC-----cccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHH-HHhh-CCCCEeeeecccCCCeeeEeeccc
Confidence 221 1 11 1224799999999997 344568999887653 2211 1000 0010
Q ss_pred -----CCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecC
Q 011057 308 -----GADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKD 382 (494)
Q Consensus 308 -----~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~ 382 (494)
...... ...++......++.+.+++.++.+|++++.+++.++++++.++|+++++++++ ......++++.+.
T Consensus 314 ~~~~~~~~~~~-~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~v~~~- 390 (447)
T PRK00451 314 REQHIRREKAT-SNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELF-DGPFFNEFVVRLP- 390 (447)
T ss_pred ccccccccccc-ccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-CCCeEEEEEEecC-
Confidence 000000 00011111222455556778899999999999999999999999999888886 3222344445542
Q ss_pred CCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 383 NKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 383 ~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
.+..++.++|.++|+++.....+.......++|++++.++|++++++|+++|++++
T Consensus 391 ---~~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 391 ---KPAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred ---CCHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 25679999999999874211111111113579999999999999999999998764
No 40
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.97 E-value=1.4e-29 Score=253.21 Aligned_cols=330 Identities=18% Similarity=0.154 Sum_probs=244.1
Q ss_pred ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA 147 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~ 147 (494)
.++.+.+++.+.+. . ..++...++.+++++++++++|.+.. ..++++.+|++++.+++.+...
T Consensus 10 ~~~~v~~a~~~~~~----~-~~~~~~~~~~~~~~~~la~~~g~~~~----~~~~~~~~~t~al~~~~~~~~~-------- 72 (356)
T cd06451 10 VPPRVLKAMNRPML----G-HRSPEFLALMDEILEGLRYVFQTENG----LTFLLSGSGTGAMEAALSNLLE-------- 72 (356)
T ss_pred CCHHHHHHhCCCcc----C-CCCHHHHHHHHHHHHHHHHHhcCCCC----CEEEEecCcHHHHHHHHHHhCC--------
Confidence 34667777653321 1 24667778888999999999999541 2467888899999888876632
Q ss_pred cCCCCCCCeEEeCCCcchH--HHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh-CCeEEEEeeCCCCcccccCHHHH
Q 011057 148 EGKPFDKPNIVTGANVQVC--WEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAAILGSTLNGEFEDVKLL 224 (494)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~~~~~~tG~~~~l~~I 224 (494)
.+++|+++...|++ +...++..|++++.++++++ +.+|++++++.+++ ++++|++++++|++|.+.|+++|
T Consensus 73 -----~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i 146 (356)
T cd06451 73 -----PGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWG-EAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGI 146 (356)
T ss_pred -----CCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCC-CCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHH
Confidence 12578888888876 56778889999999998864 68999999999987 89999999999999999999999
Q ss_pred HHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCccccccc--
Q 011057 225 NDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIF-- 302 (494)
Q Consensus 225 ~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~-- 302 (494)
.++|+++ |+++++|++|+.+..++ ++...++|++..++|||+++|.|+|+++++++ .+ ..+..
T Consensus 147 ~~~a~~~------~~~li~D~~~~~g~~~~-------~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~-~~-~~~~~~~ 211 (356)
T cd06451 147 GALAKKH------DALLIVDAVSSLGGEPF-------RMDEWGVDVAYTGSQKALGAPPGLGPIAFSER-AL-ERIKKKT 211 (356)
T ss_pred HHHHHhc------CCEEEEeeehhccCccc-------cccccCccEEEecCchhccCCCCcceeEECHH-HH-HHHHhcC
Confidence 9999999 99999999997654322 22223689999999999999999999998754 22 11111
Q ss_pred -ccCCCCC-------CCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-Cc
Q 011057 303 -HINYLGA-------DQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GV 373 (494)
Q Consensus 303 -~~~y~~~-------~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~ 373 (494)
...|... ....+...++.+.....++.++++.+...++++..++..++++++.+.|++++ +++..++. ..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~ 290 (356)
T cd06451 212 KPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALG-LKLLAKPELRS 290 (356)
T ss_pred CCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccCC
Confidence 1111100 00011122344445567778888888888899999999999999999999985 88875432 24
Q ss_pred cEEE-EEecCCCCCCHHHHHHHHHhc-CceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 374 PLVA-FSLKDNKRHDEFEVAELLRRF-GWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 374 ~~v~-f~~~~~~~~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
+.+. +.++ .+.+..+++++|.++ ||.+.....+ ....++|++++.+++.++++++++.|++++
T Consensus 291 ~~~~~~~~~--~~~~~~~~~~~L~~~~gI~~~~g~~~---~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 291 PTVTAVLVP--EGVDGDEVVRRLMKRYNIEIAGGLGP---TAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred CceEEEECC--CCCCHHHHHHHHHHhCCEEEeccccc---ccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 4443 4442 245788999999998 9987543322 123489999999999999999999998875
No 41
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.97 E-value=1.5e-29 Score=255.86 Aligned_cols=334 Identities=13% Similarity=0.031 Sum_probs=249.7
Q ss_pred hHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhc
Q 011057 69 EPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAE 148 (494)
Q Consensus 69 ~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~ 148 (494)
++.+.+++.... .+ ..++...++.+++++++++++|.+.+ ...+++++||+++..++....+
T Consensus 21 ~~~V~~a~~~~~----~~-~~~~~~~~~~~~~~~~l~~~~g~~~~----~~vi~~~~gt~a~~~a~~~~~~--------- 82 (401)
T PLN02409 21 PERVLRAMNRPN----ED-HRSPAFPALTKELLEDVKYIFKTKSG----TPFIFPTTGTGAWESALTNTLS--------- 82 (401)
T ss_pred CHHHHHHhcCCC----CC-CCCHHHHHHHHHHHHHHHHHhCCCCC----CEEEEeCCcHHHHHHHHHhcCC---------
Confidence 455666654322 22 23677888999999999999999742 3478888999988766655422
Q ss_pred CCCCCCCeEEeCCCcchHH--HHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh----CCeEEEEeeCCCCcccccCHH
Q 011057 149 GKPFDKPNIVTGANVQVCW--EKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE----NTICVAAILGSTLNGEFEDVK 222 (494)
Q Consensus 149 g~~~~~~~vi~~~~~h~s~--~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~t~~vv~~~~~~~tG~~~~l~ 222 (494)
.+++|+++...|++. ...++..|++++.++.+++ ..+|++++++++++ ++++|++++++|+||.+.|++
T Consensus 83 ----~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~ 157 (401)
T PLN02409 83 ----PGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWG-QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLA 157 (401)
T ss_pred ----CCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCC-CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHH
Confidence 136899988888654 5678889999999998764 35899999999986 689999999999999999999
Q ss_pred HHHHH--HHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCccccc
Q 011057 223 LLNDL--LAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEEL 300 (494)
Q Consensus 223 ~I~~l--a~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~ 300 (494)
+|+++ |+++ |++++||++++.+..++ ++...++|++++++|||+++|.|+|+++++++. +....
T Consensus 158 ~i~~l~~~~~~------g~~~vvD~v~s~g~~~i-------d~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~-~~~~~ 223 (401)
T PLN02409 158 GVRKLLDCAQH------PALLLVDGVSSIGALDF-------RMDEWGVDVALTGSQKALSLPTGLGIVCASPKA-LEASK 223 (401)
T ss_pred HHHHHHhhhcc------CcEEEEEcccccCCccc-------cccccCccEEEEcCccccCcCCCcceeEECHHH-HHHHh
Confidence 99999 9999 99999999998765433 333347999999999999999999999987642 21111
Q ss_pred cc--ccCCCCC------CCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-
Q 011057 301 IF--HINYLGA------DQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE- 371 (494)
Q Consensus 301 ~~--~~~y~~~------~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~- 371 (494)
.. .+.|... ........+|.+...++++.++++.+...|++++.+++.++++++++.|++++ ++++.+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g-~~~~~~~~~ 302 (401)
T PLN02409 224 TAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWG-LKLCTKKPE 302 (401)
T ss_pred cCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCChh
Confidence 10 1111110 00000012466666778899999998889999999999999999999999985 99886421
Q ss_pred -Cc-cEEEEEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 372 -GV-PLVAFSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 372 -~~-~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
.. .+++|.++ .+++..++.+.|. +.|+.+.....+ ....++||+++.+++.+++.+++.+|++++..+.
T Consensus 303 ~~s~~v~~~~~p--~~~~~~~l~~~l~~~~~i~i~~G~~~---~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 303 WRSDTVTAVVVP--EGIDSAEIVKNAWKKYNLSLGLGLNK---VAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred hcccceEEEeCC--CCCCHHHHHHHHHHhCCEEEEcCCCc---ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 23 45567663 3567788988875 668887544322 2346799999999999999999999999887654
No 42
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.97 E-value=6.3e-29 Score=249.04 Aligned_cols=317 Identities=17% Similarity=0.123 Sum_probs=232.0
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchH-HHH
Q 011057 91 PVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVC-WEK 169 (494)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s-~~~ 169 (494)
+...++.+++++.+++++|.+++ ...+++|+|||+++..++.++..+ .+..|+++...|.. +..
T Consensus 31 ~~~~~~~~~~r~~la~l~~~~~~---~~~i~~t~~~t~al~~~~~~l~~~------------~~~vlv~~~~~~~~~~~~ 95 (363)
T TIGR02326 31 SDYNIVVEQIRQQLLALATAEEG---YTSVLLQGSGTFAVEAVIGSAVPK------------DGKLLVVINGAYGARIVQ 95 (363)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCC---ceEEEEcCCCHHHHHHHHHhcCCC------------CCeEEEEeCChhhHHHHH
Confidence 45667778899999999999752 124889999999999887666321 11245556556655 457
Q ss_pred HHHHcCCeeEEEeccCCccccCHHHHHHhhhhC--CeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccc
Q 011057 170 FARYFEVELKEVKLSEGYYVMDPVKAVEMVDEN--TICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAAS 247 (494)
Q Consensus 170 ~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~--t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~ 247 (494)
.++..|++++.++++++ +.+|++++++++.++ +++|.+++++|+||.+.|+++|+++||++ +++++||+++
T Consensus 96 ~a~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~------g~~livD~~~ 168 (363)
T TIGR02326 96 IAEYLGIPHHVVDTGEV-EPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRH------GKVTIVDAMS 168 (363)
T ss_pred HHHHcCCceEEEeCCCC-CCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHc------CCEEEEEccc
Confidence 78889999999998864 679999999999754 46788899999999999999999999999 9999999999
Q ss_pred ccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccC-CCC-------CCCCCcccccC
Q 011057 248 GGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHIN-YLG-------ADQPTFTLNFS 319 (494)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~-y~~-------~~~~~~~~~~s 319 (494)
+.+..++ ++...++|++.+++|||+++|.|+|+++++++. +......... +.. .........++
T Consensus 169 ~~g~~~~-------~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft 240 (363)
T TIGR02326 169 SFGGIPI-------DIAELHIDYLISSANKCIQGVPGFGFVIARQAE-LAACKGNARSLSLDLYDQWRCMEDNHGKWRFT 240 (363)
T ss_pred cccCccc-------chhhcCccEEEecCccccccCCcceEEEECHHH-HHHhhcCCCceeecHHHHHHHHhccCCCCCCC
Confidence 8765433 333346999999999999999999999987642 2111000000 000 00000011234
Q ss_pred cchHHHHHHHHHHHHhcHh-HHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-CccE-EEEEecCCCCCCHHHHHHHHH
Q 011057 320 KGSSQVIAQYYQLIRLGFE-GYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GVPL-VAFSLKDNKRHDEFEVAELLR 396 (494)
Q Consensus 320 ~~~~~~~a~~~al~~l~~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~-v~f~~~~~~~~~~~~l~~~L~ 396 (494)
.+...++++.++++.+..+ +++++.+++.++++++++.|++++ ++++.++. +.++ ++|.++.....+..++.+.|.
T Consensus 241 ~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~ 319 (363)
T TIGR02326 241 SPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALG-FEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLK 319 (363)
T ss_pred CcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccCCceEEEEECCCCCCCCHHHHHHHHH
Confidence 5667778888889887665 588889999999999999999985 88765431 3444 456664322356778999999
Q ss_pred hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 397 RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 397 ~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
++||.++....+ ...++|++++.+++.++++++++.|+++++
T Consensus 320 ~~gi~v~~g~~~----~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 320 EQGFVIYPGKVS----QVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred HCCEEEECCcCC----CCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 999998543222 235799998888999999999999988753
No 43
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.97 E-value=8.2e-29 Score=251.54 Aligned_cols=330 Identities=13% Similarity=0.023 Sum_probs=235.1
Q ss_pred CChHHHHHHHHHHhcccC---C-CCCC-ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNY---V-DMDE-YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKW 141 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~---~-~~~~-~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~ 141 (494)
+.++.+.+++..+++... . .+.. ......+.+++++ + +++|.++ ..+++|+|+|+++.+++..+..+
T Consensus 38 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~-----~~v~~~~~~t~~l~~~~~~~~~~- 109 (406)
T TIGR01814 38 LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKE-----DEVVVMNTLTINLHLLLASFYKP- 109 (406)
T ss_pred cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCC-----CcEEEeCCchHHHHHHHHHhcCC-
Confidence 445667777776654321 1 1111 1233344444444 5 8999875 34899999999998877665211
Q ss_pred HHHHHhcCCCCCCCeEEeCCCcchHH----HHHHHHcCCee----EEEeccCCccccCHHHHHHhhh---hCCeEEEEee
Q 011057 142 QNKRKAEGKPFDKPNIVTGANVQVCW----EKFARYFEVEL----KEVKLSEGYYVMDPVKAVEMVD---ENTICVAAIL 210 (494)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~~~~~h~s~----~~~~~~~G~~v----~~v~~~~~~~~~d~~~L~~~i~---~~t~~vv~~~ 210 (494)
+ ..+.+|+++..+|.+. ...++..|+++ +.++.+++ +.+|++++++.+. ++|++|++++
T Consensus 110 -------~--~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~-g~~~~~~l~~~~~~~~~~t~lv~~~~ 179 (406)
T TIGR01814 110 -------T--PKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREE-ETLRLEDILDTIEKNGDDIAVILLSG 179 (406)
T ss_pred -------c--CCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCC-CccCHHHHHHHHHhcCCCeEEEEEec
Confidence 0 0123688888999873 33456779887 45555543 6789999988874 6789999999
Q ss_pred CCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEE
Q 011057 211 GSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIW 290 (494)
Q Consensus 211 ~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~ 290 (494)
+++.+|.+.|+++|+++||++ |++++||++|+.+..++ ++...++|++++++|||+++|+| |++++
T Consensus 180 v~~~tG~~~~~~~i~~~~~~~------g~~~~vD~aq~~G~~~i-------d~~~~gvD~~~~s~hK~l~g~pG-~~l~v 245 (406)
T TIGR01814 180 VQYYTGQLFDMAAITRAAHAK------GALVGFDLAHAVGNVPL-------DLHDWGVDFACWCTYKYLNAGPG-AGAFV 245 (406)
T ss_pred cccccceecCHHHHHHHHHHc------CCEEEEEcccccCCccc-------ccccCCCCEEEEcCccccCCCCC-eEEEE
Confidence 999999999999999999999 99999999999987654 44445899999999999987778 66666
Q ss_pred eCCCCcccccccccCCCCCC--------------CCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHH
Q 011057 291 RNKEDLPEELIFHINYLGAD--------------QPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKE 356 (494)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~--------------~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~ 356 (494)
+.+... ...+....|.... ...+ -.||.+...++++.++++.+...|++++.++..++++++++
T Consensus 246 ~~~~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~ 323 (406)
T TIGR01814 246 HEKHAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGF-RISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEE 323 (406)
T ss_pred ehhhhh-hcCCCCCcccCCCCccccccccccCCCccce-eeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 544221 1111111221110 0011 13677777888899999999888899999999999999999
Q ss_pred HHhhC----CCeEEeecCC---CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEe-ccCCChH
Q 011057 357 GLEKT----GRFNIVSKDE---GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVI-REDFSRT 428 (494)
Q Consensus 357 ~L~~~----~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~-~~~~t~~ 428 (494)
.|+++ ++++++.+.. +.++++|.++ .+..++.++|.++||++.. .+...+|+|+ +.++|.+
T Consensus 324 ~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~----~~~~~~~~~L~~~gi~v~~-------~~~~~iRiS~~~~~nt~~ 392 (406)
T TIGR01814 324 LIKARCGGPPVLTIITPRDHAQRGCQLSLTHP----VPGKAVFQALIKRGVIGDK-------REPSVIRVAPVPLYNTFV 392 (406)
T ss_pred HHHhhcCCCCceEEeCCCChhhcCCeEEEEec----CCHHHHHHHHHHCCEEEec-------cCCCeEEEechhccCCHH
Confidence 99886 3588876532 4568888874 2567899999999997631 1224799999 5799999
Q ss_pred HHHHHHHHHHHHH
Q 011057 429 LAERLVLDITKVL 441 (494)
Q Consensus 429 ~id~~i~~l~~~~ 441 (494)
||+++++.|++++
T Consensus 393 did~l~~~l~~~~ 405 (406)
T TIGR01814 393 DVYDAVNVLEEIL 405 (406)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998765
No 44
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.97 E-value=5.1e-30 Score=251.81 Aligned_cols=373 Identities=14% Similarity=0.121 Sum_probs=276.3
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHH
Q 011057 88 DEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCW 167 (494)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~ 167 (494)
+..+++.++-.++.++|+++.|++. ..+..++|.++.+.++++.|.....+ | ...+...++|..+|...
T Consensus 575 eQaqGY~~lf~~Le~~Lc~iTG~D~------~s~QPNsGA~GEYaGL~~IRaY~~~k----g-e~hRnvClIPvSAHGTN 643 (1001)
T KOG2040|consen 575 EQAQGYQQLFTELEKDLCEITGFDS------FSLQPNSGAQGEYAGLRVIRAYLESK----G-EGHRNVCLIPVSAHGTN 643 (1001)
T ss_pred HHHhhHHHHHHHHHHHhheeecccc------eeecCCCCcccchhhHHHHHHHHHhc----c-CCcceeEEEeecccCCC
Confidence 3456899999999999999999985 35566788888888888776654322 1 11234568999999999
Q ss_pred HHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhC---CeEEEEeeCCCCcccccC-HHHHHHHHHHhhcccCCCceEEE
Q 011057 168 EKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDEN---TICVAAILGSTLNGEFED-VKLLNDLLAEKNKETGWDTPIHV 243 (494)
Q Consensus 168 ~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~---t~~vv~~~~~~~tG~~~~-l~~I~~la~~~~~~~~~~~~l~v 243 (494)
...+.+.|++|+.|.++.+ +.+|+.+|+++.++. -.++.++.|+|. |.+++ +++++++.|++ |..++.
T Consensus 644 PASA~MagmkvvpV~~~~~-G~id~~dLk~kaekh~~~Laa~MvTYPST~-GvfE~~i~d~cd~iHeh------GGQVYl 715 (1001)
T KOG2040|consen 644 PASAAMAGMKVVPVGCDAN-GNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GVFEEGIDDICDIIHEH------GGQVYL 715 (1001)
T ss_pred hhhHHhcCCEEEEeeccCC-CCccHHHHHHHHHHhhhhhheeEEeccccc-ccccccHHHHHHHHHhc------CCEEEe
Confidence 9999999999999999875 799999999888764 467888999887 88865 99999999999 999999
Q ss_pred ecccccccccccCCcccccccCCCceEEEEcCcccCCcCCce-----EEEEEeCCCCcccccccccCCCCC--C--CCCc
Q 011057 244 DAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGI-----GWVIWRNKEDLPEELIFHINYLGA--D--QPTF 314 (494)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~-----G~~~~~~~~~~~~~~~~~~~y~~~--~--~~~~ 314 (494)
|||.....+.++.|. ..++|+..++.||.++.|.|. |-+.++. ++...++.++-.... . ..-.
T Consensus 716 DGANMNAqVGlc~pG------d~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~--HLapfLP~HpVvs~~~~~~~~~~g 787 (1001)
T KOG2040|consen 716 DGANMNAQVGLCRPG------DIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK--HLAPFLPSHPVVSPGRPEDTSPVG 787 (1001)
T ss_pred cCCCccceecccCCc------cccccceeecccceeeecCCCCCCCCCccchhh--hccccCCCCCccCCCCCCCCCCcc
Confidence 999987666555552 238999999999998776544 4454443 444444444332111 1 1001
Q ss_pred ccccCcch--HHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEe-------cCCCC
Q 011057 315 TLNFSKGS--SQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSL-------KDNKR 385 (494)
Q Consensus 315 ~~~~s~~~--~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~-------~~~~~ 385 (494)
+....+.+ ....-.|+.++++|..|++...+-..-+++|+..+|+.. .+++.... .+.++..+ +...+
T Consensus 788 sVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~-~~~vaHEFIlD~r~fK~~ag 864 (1001)
T KOG2040|consen 788 SVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGE-NGLVAHEFILDLRPFKKTAG 864 (1001)
T ss_pred ceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecC-CcceeeeeeeechhhccccC
Confidence 11111111 112347899999999999999999999999999999987 66665542 33444322 12246
Q ss_pred CCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhcCccccccccccccCccCcc
Q 011057 386 HDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLPSKVLVPASEQNGRNGKK 465 (494)
Q Consensus 386 ~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 465 (494)
+++.+++++|.+.|+..++..+| ..+.-++ --++.-+.+|+|||+++|-.+.++|+++.+.-.+...|+++.+||+
T Consensus 865 ieavDvAKRL~DYgFHaPTmswP--V~gtLMI--EPTESE~k~ElDRfcdAliSIreEI~~ie~G~~dk~~n~Lk~aPH~ 940 (1001)
T KOG2040|consen 865 IEAVDVAKRLMDYGFHAPTMSWP--VAGTLMI--EPTESEDKAELDRFCDALISIREEIAQIEEGRQDKRNNPLKMAPHP 940 (1001)
T ss_pred CcHHHHHHHHHhccCCCCccccc--cCCceEe--ccCccccHHHHHHHHHHHHHHHHHHHHHHccCCCcccCcccCCCCC
Confidence 88899999999999999888877 3444444 4445557899999999999999999998777677777888877777
Q ss_pred ccc----cccc--------------ccchhhhhhhcc-cccccCCCCC
Q 011057 466 TEI----ETQR--------------EVTTYWRKFVSE-RKANNKNKIC 494 (494)
Q Consensus 466 ~~~----~~~~--------------~~~~~~~~~~~~-~~~~~~~~~~ 494 (494)
..- .|.+ ..+||||++.|+ +.|||+|+||
T Consensus 941 ~~~v~s~~WdrpYsRE~AafP~p~lk~~KfWPtv~RvDd~YGD~nLvC 988 (1001)
T KOG2040|consen 941 LEDVTSDNWDRPYSREYAAFPAPFLKENKFWPTVGRVDDAYGDRNLVC 988 (1001)
T ss_pred HHHhhhhccCCccchhhhcCCchhhhhcccCCcccccccccCccceee
Confidence 652 1111 148999999999 9999999999
No 45
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.97 E-value=1.2e-28 Score=248.42 Aligned_cols=332 Identities=14% Similarity=0.062 Sum_probs=234.2
Q ss_pred CChHHHHHHHHHHhcccCC----CCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYV----DMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~----~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~ 142 (494)
++++.+.+++.++...... .+..........+++++.+|+++|.+. ..+++|+++++..++.++..+
T Consensus 31 p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~-------~~~~~g~t~a~~~al~~l~~~-- 101 (387)
T PRK09331 31 ILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDE-------ARVTHGAREGKFAVMHSLCKK-- 101 (387)
T ss_pred CCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHhcCC--
Confidence 5567788888877743211 011112233456678888999999974 778999999999887776321
Q ss_pred HHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEec--cCCccccCHHHHHHhhhh-------CCeEEEEeeCCC
Q 011057 143 NKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKL--SEGYYVMDPVKAVEMVDE-------NTICVAAILGST 213 (494)
Q Consensus 143 ~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~--~~~~~~~d~~~L~~~i~~-------~t~~vv~~~~~~ 213 (494)
+++|+++..+|++...+++..|++++.+++ ++ ++.+|++++++++.+ ++++|+++++++
T Consensus 102 -----------gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~ 169 (387)
T PRK09331 102 -----------GDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYP-EYKITPEAYAEKIEEVKEETGKPPALALLTHVDG 169 (387)
T ss_pred -----------CCEEEECCCchHHHHHHHHHcCCEEEEEeCccCc-CCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCC
Confidence 268999999999998889999999999998 44 378999999999864 588999999999
Q ss_pred CcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCC
Q 011057 214 LNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNK 293 (494)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~ 293 (494)
++|.+.|+++|+++|+++ |+++|||+||+.+..|+. ....++|++++++|||+++|.|+|+++++++
T Consensus 170 ~tG~~~~l~~I~~la~~~------g~~livD~a~~~g~~~~~-------~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~ 236 (387)
T PRK09331 170 NYGNLADAKKVAKVAHEY------GIPFLLNGAYTVGRMPVD-------GKKLGADFIVGSGHKSMAASAPSGVLATTEE 236 (387)
T ss_pred CCcccccHHHHHHHHHHc------CCEEEEECCcccCCcCCC-------HHHcCCCEEEeeCcccccCCCCEEEEEECHH
Confidence 999999999999999999 999999999998765442 1223689999999999999999999887653
Q ss_pred CCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC-CC
Q 011057 294 EDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKD-EG 372 (494)
Q Consensus 294 ~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~ 372 (494)
.+.........|....... +.++.+...++++++++..+... .++.++.++++++++++|+++++++++.+. ..
T Consensus 237 -~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~ 311 (387)
T PRK09331 237 -YADKVFRTSRKFGVKEVEL--LGCTLRGAPLVTLMASFPHVVER--VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRN 311 (387)
T ss_pred -HHhhcccccCCCcccceee--eceecCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCc
Confidence 2222111111121110000 11122223455556666554322 235566788899999999999779988532 24
Q ss_pred ccEEEEEecC------CCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 373 VPLVAFSLKD------NKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 373 ~~~v~f~~~~------~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
.+++.+..+. ....+...+.+.|.++||.. ..+ ....++|++.+. ++.++++++++.|+++++++
T Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~---~~~---~~~~i~ri~~~g-~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 312 HDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHG---IKP---GATKEFKLSTYG-LTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred CCeEEEeCCchhHHhhhccccchhHHHHHHHcCceE---Ecc---CCceEEEEEecc-CCHHHHHHHHHHHHHHHHhc
Confidence 5677666431 11223457999999999972 112 234567887755 78999999999999887653
No 46
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.97 E-value=4.9e-29 Score=239.87 Aligned_cols=355 Identities=18% Similarity=0.112 Sum_probs=242.2
Q ss_pred cccccCCChHHHHHHHHHHhcccCCCCCCC-hhhHHH--HHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHH
Q 011057 61 ASFVTTWMEPECDKLMMAAINKNYVDMDEY-PVTTEL--QNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAF 137 (494)
Q Consensus 61 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~l--e~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~ 137 (494)
-...+++.+|.+.+++..++.....++... .++... -++.|+.+|+|+|+++. .++||+|+||+|.++++..
T Consensus 48 d~~at~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~-----dIiFts~ATEs~Nlvl~~v 122 (428)
T KOG1549|consen 48 DNQATGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPS-----DIVFTSGATESNNLVLKGV 122 (428)
T ss_pred ecCcCCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCC-----cEEEeCCchHHHHHHHHHh
Confidence 334466778999999988887755544333 333222 35789999999999973 3999999999999998877
Q ss_pred HHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHc---CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCC
Q 011057 138 KRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYF---EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTL 214 (494)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~---G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~ 214 (494)
.+.+.. ..+..||+...+|.|+...++.+ |++++.+|++. ++..|++.+++.|+++|++|.+.+.+|.
T Consensus 123 ~~~~~~--------~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~-~~~~d~~~~~~~i~~~T~lv~I~~Vnn~ 193 (428)
T KOG1549|consen 123 ARFFGD--------KTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVED-SGLVDISKLREAIRSKTRLVSIMHVNNE 193 (428)
T ss_pred hccccc--------cccceEEEecccCcchhHHHHHHHhcCeEEEEeccCc-cccccHHHHHHhcCCCceEEEEEecccC
Confidence 553211 11237999999999887776554 89999999984 4799999999999999999999999999
Q ss_pred cccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCC
Q 011057 215 NGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 294 (494)
Q Consensus 215 tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~ 294 (494)
.|.+.|++||+++|++. ++.+|+|+||+.|-.+. |++..++|++++++|||+++| |+|++|++...
T Consensus 194 ~gv~~Pv~EI~~icr~~------~v~v~~DaAQavG~i~v-------DV~eln~D~~s~s~HK~ygp~-~iGaLYvr~~~ 259 (428)
T KOG1549|consen 194 IGVLQPVKEIVKICREE------GVQVHVDAAQAVGKIPV-------DVQELNADFLSISAHKIYGPP-GIGALYVRRKR 259 (428)
T ss_pred ccccccHHHHHHHhCcC------CcEEEeehhhhcCCccc-------cHHHcCchheeeecccccCCC-cceEEEEccCC
Confidence 99999999999999999 99999999999876543 666668999999999997555 59999998722
Q ss_pred CcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhh-CCCeEEeecCC--
Q 011057 295 DLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEK-TGRFNIVSKDE-- 371 (494)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~-- 371 (494)
..+...+.+.++.+...--.||+....++.+-.+.+....+. .....+..++...+...+.. .++..+...+.
T Consensus 260 ---~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~-~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~ 335 (428)
T KOG1549|consen 260 ---PRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEM-AYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSR 335 (428)
T ss_pred ---CcccccCcccCCccccccccCCcCchhhhhhHHHHHHHHhhc-chhHHHHHHHHHHHHHHHhhhCchhhccCCcccc
Confidence 223445667777655444457777777777777777664431 11222223344455555433 44344444332
Q ss_pred CccEEEEEecCCCCCCH-HHHHHHHHhcCcee------eccccCC----CCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 372 GVPLVAFSLKDNKRHDE-FEVAELLRRFGWIV------PAYTMPA----DAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 372 ~~~~v~f~~~~~~~~~~-~~l~~~L~~~Gi~v------~~~~~~~----~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
..+.+.|.+....+... .+..+.-...|..+ +.+.... .......+|++++.+++.+|++++++.+.+.
T Consensus 336 ~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~ 415 (428)
T KOG1549|consen 336 YPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKL 415 (428)
T ss_pred cccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHH
Confidence 22344444431111111 11111111111111 0011110 1123567999999999999999999999988
Q ss_pred HHHHhcC
Q 011057 441 LHELDSL 447 (494)
Q Consensus 441 ~~~l~~~ 447 (494)
+..+...
T Consensus 416 v~~~~~~ 422 (428)
T KOG1549|consen 416 VSLLREM 422 (428)
T ss_pred HHhcccc
Confidence 8777654
No 47
>PRK14012 cysteine desulfurase; Provisional
Probab=99.97 E-value=5.8e-28 Score=245.28 Aligned_cols=340 Identities=18% Similarity=0.136 Sum_probs=238.7
Q ss_pred CCChHHHHHHHHHHhc--ccCCCCCC--Ch---hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHH
Q 011057 66 TWMEPECDKLMMAAIN--KNYVDMDE--YP---VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFK 138 (494)
Q Consensus 66 ~~~~p~~~~~~~~~~~--~~~~~~~~--~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~ 138 (494)
++.++.+.+++.+++. ....++.. .. ......+++++++++++|.++ ..+++++|+|+++.+++.++.
T Consensus 13 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~-----~~v~~~~g~t~al~~~l~~l~ 87 (404)
T PRK14012 13 TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADP-----REIVFTSGATESDNLAIKGAA 87 (404)
T ss_pred CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCc-----CeEEEeCCHHHHHHHHHHHHH
Confidence 3556778888887775 33332221 11 113455678899999999975 348899999999998887764
Q ss_pred HHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHH---HcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCc
Q 011057 139 RKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFAR---YFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLN 215 (494)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~---~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~t 215 (494)
..+.. .+++|+++..+|+++...++ ..|++++.++++++ +.+|+++|+++|++++++|++++++|+|
T Consensus 88 ~~~~~---------~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~-g~~d~~~l~~~i~~~t~lv~~~~~~n~t 157 (404)
T PRK14012 88 HFYQK---------KGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSN-GIIDLEKLEAAMRDDTILVSIMHVNNEI 157 (404)
T ss_pred HhhcC---------CCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCC-CcCCHHHHHHhcCCCCEEEEEECcCCCc
Confidence 32110 13689999999988765544 35999999998864 7899999999999999999999999999
Q ss_pred ccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCC
Q 011057 216 GEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKED 295 (494)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~ 295 (494)
|.+.|+++|.++|+++ ++++++|+|++.+..++ ++...++|++++++||++ +|.|+|+++++++..
T Consensus 158 G~~~~~~~I~~la~~~------g~~vivD~a~~~g~~~~-------~~~~~~~D~~~~s~~K~~-gp~g~G~l~~~~~~~ 223 (404)
T PRK14012 158 GVIQDIAAIGEICRER------GIIFHVDAAQSVGKVPI-------DLSKLKVDLMSFSAHKIY-GPKGIGALYVRRKPR 223 (404)
T ss_pred cchhhHHHHHHHHHHc------CCEEEEEcchhcCCccc-------CcccCCCCEEEEehhhcc-CCCceEEEEEecCCC
Confidence 9999999999999999 99999999998765432 222346999999999954 678999999987533
Q ss_pred cccccccccCCCCCCC-CCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-Cc
Q 011057 296 LPEELIFHINYLGADQ-PTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GV 373 (494)
Q Consensus 296 ~~~~~~~~~~y~~~~~-~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~ 373 (494)
. . ..+.+.++.. ..+. .++.+....+++.+++..+. .++.++.++..++++++.+.|++++++++..+.. ..
T Consensus 224 ~-~---~~~~~~g~~~~~~~~-~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~ 297 (404)
T PRK14012 224 V-R---LEAQMHGGGHERGMR-SGTLPTHQIVGMGEAARIAK-EEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRV 297 (404)
T ss_pred C-C---CCceecCCCccCCcc-CCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccC
Confidence 2 1 1111222211 1111 24555555666667776553 3566778889999999999999988887654321 11
Q ss_pred -c--EEEEEecCCCCCCHHHHHHHHHhcCceeeccc--cCCC--------------CCCceEEEEEeccCCChHHHHHHH
Q 011057 374 -P--LVAFSLKDNKRHDEFEVAELLRRFGWIVPAYT--MPAD--------------AQHITVLRVVIREDFSRTLAERLV 434 (494)
Q Consensus 374 -~--~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~--~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i 434 (494)
+ .+.|.+. +..++.+.|. ++.|.+.. .+.. ......+|++++.++|.+|+|+++
T Consensus 298 ~~~~~~~~~~~-----~~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~ 370 (404)
T PRK14012 298 PGNLNVSFNYV-----EGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAI 370 (404)
T ss_pred CCEEEEEEeCc-----CHHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHH
Confidence 2 3444432 2356777775 44332211 1110 012367999999999999999999
Q ss_pred HHHHHHHHHHhcC
Q 011057 435 LDITKVLHELDSL 447 (494)
Q Consensus 435 ~~l~~~~~~l~~~ 447 (494)
+.|+++++.++..
T Consensus 371 ~~l~~~~~~~~~~ 383 (404)
T PRK14012 371 ELVRKSIGKLREL 383 (404)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887654
No 48
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.97 E-value=5.6e-28 Score=241.25 Aligned_cols=303 Identities=16% Similarity=0.117 Sum_probs=224.6
Q ss_pred CCChHHHHHHHHHHhcccCCCCCC-----ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 011057 66 TWMEPECDKLMMAAINKNYVDMDE-----YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRK 140 (494)
Q Consensus 66 ~~~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~ 140 (494)
+++++.+.+++.+++.....++.. .....++.+++++++++++|.++ ..+++|+|+|+++..++.++...
T Consensus 8 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~-----~~v~~~~g~t~a~~~~l~~l~~~ 82 (353)
T TIGR03235 8 TPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADT-----EEVIFTSGATESNNLAILGLARA 82 (353)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCC-----CeEEEeCCHHHHHHHHHHHHHHh
Confidence 356677888888877543322221 12344667789999999999975 34899999999999887766432
Q ss_pred HHHHHHhcCCCCCCCeEEeCCCcchHHHHH---HHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCccc
Q 011057 141 WQNKRKAEGKPFDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGE 217 (494)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~---~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~ 217 (494)
+....+++|+++...|+++... ++..|++++.++++++ +.+|+++|++++++++++|++++++|+||.
T Consensus 83 --------~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~ 153 (353)
T TIGR03235 83 --------GEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDES-GRIDVDELADAIRPDTLLVSIMHVNNETGS 153 (353)
T ss_pred --------cccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCC-CcCCHHHHHHhCCCCCEEEEEEcccCCcee
Confidence 0111125799999999876554 3456999999998864 689999999999888999999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcc
Q 011057 218 FEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP 297 (494)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~ 297 (494)
+.|+++|.++|+++ +++++||++|+.+..++ ++...++|++++++||| ++|.|+|+++++++....
T Consensus 154 ~~~~~~I~~l~~~~------~~~~ivD~a~~~g~~~~-------~~~~~~~D~~~~s~~K~-~gp~g~g~l~~~~~~~~~ 219 (353)
T TIGR03235 154 IQPIREIAEVLEAH------EAFFHVDAAQVVGKITV-------DLSADRIDLISCSGHKI-YGPKGIGALVIRKRGKPK 219 (353)
T ss_pred ccCHHHHHHHHHHc------CCEEEEEchhhcCCccc-------cccccCCCEEEeehhhc-CCCCceEEEEEccCcccc
Confidence 99999999999999 99999999999876543 33334799999999999 579999999998763211
Q ss_pred cccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC--CccE
Q 011057 298 EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE--GVPL 375 (494)
Q Consensus 298 ~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~--~~~~ 375 (494)
. ...+.+.+.........++.+...++++.++++.+. ++.+++.+++.+++++++++|++ .+++++.++. ..++
T Consensus 220 ~--~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i 295 (353)
T TIGR03235 220 A--PLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHI 295 (353)
T ss_pred c--ccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCE
Confidence 1 111222222111111236777777888888888764 57788999999999999999988 4599876432 3457
Q ss_pred EEEEecCCCCCCHHHHHHHHHhcCceeec
Q 011057 376 VAFSLKDNKRHDEFEVAELLRRFGWIVPA 404 (494)
Q Consensus 376 v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~ 404 (494)
++|.++ +.+..++.++|.+ +|.+++
T Consensus 296 ~~~~~~---~~~~~~v~~~L~~-~i~v~~ 320 (353)
T TIGR03235 296 LNFSID---GVNSEALIVNLRA-DAAVST 320 (353)
T ss_pred EEEEeC---CcCHHHHHHHHhC-CeEEEc
Confidence 888764 3577899999965 887754
No 49
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=9.9e-28 Score=243.58 Aligned_cols=358 Identities=15% Similarity=0.075 Sum_probs=238.8
Q ss_pred HHHHHHHHhhhhcC---CCCCcccccccCCChHHHH-HHHHHHhcccCCCCCC-----ChhhHHHHHHHHHHHHHHhCCC
Q 011057 41 AAYQIINDELMLDG---NPRLNLASFVTTWMEPECD-KLMMAAINKNYVDMDE-----YPVTTELQNRCVNIIARLFNAP 111 (494)
Q Consensus 41 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~-----~~~~~~le~~~~~~la~l~g~~ 111 (494)
++++.++.+-..+. .+..+++.+.+.+++|.+. ++..++ .....|.. +.+..++.+++++++++++|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~ 80 (398)
T cd00613 3 EVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN--EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMD 80 (398)
T ss_pred HHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc--cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC
Confidence 56666665432221 2224566666667666544 434444 11122222 5688899999999999999987
Q ss_pred CCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcC----CeeEEEeccCCc
Q 011057 112 LEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFE----VELKEVKLSEGY 187 (494)
Q Consensus 112 ~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G----~~v~~v~~~~~~ 187 (494)
.+ .+.++++|+.+...++.++... .+ .+++|+++++.|.++...+..+| ++++.++++++
T Consensus 81 ~~-----~v~~~~~g~~~~~~~~~~~~~~-------~~---~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~- 144 (398)
T cd00613 81 VA-----NASLQDEATAAAEAAGLAAIRA-------YH---KRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEG- 144 (398)
T ss_pred cc-----ceeccCchHHHHHHHHHHHHhc-------cc---CCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCC-
Confidence 42 2556665554444444444321 00 13689999999999888888877 89999998754
Q ss_pred cccCHHHHHHhhhhCCeEEEEeeCCCCcccccCH-HHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCC
Q 011057 188 YVMDPVKAVEMVDENTICVAAILGSTLNGEFEDV-KLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLP 266 (494)
Q Consensus 188 ~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l-~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (494)
+.+|+++|++++.++|++|++++++ ++|.+.|+ ++|+++|+++ |+++++|++|+.+..+. ..+..
T Consensus 145 ~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~------g~~livD~~~~~~~~~~-------~~~~~ 210 (398)
T cd00613 145 GTVDLEALKEEVSEEVAALMVQYPN-TLGVFEDLIKEIADIAHSA------GALVYVDGDNLNLTGLK-------PPGEY 210 (398)
T ss_pred CCcCHHHHHHhcCCCeEEEEEECCC-CCceecchHHHHHHHHHhc------CCEEEEEeccccccCCC-------ChHHc
Confidence 6899999999999999999999886 78999885 9999999999 99999999987543211 11123
Q ss_pred CceEEEEcCcccCCc----CCceEEEEEeCCCCcccccccc-cCCCCC-----------C----C---CCcc-cccCcch
Q 011057 267 LVKSINVSGHKYGLV----YAGIGWVIWRNKEDLPEELIFH-INYLGA-----------D----Q---PTFT-LNFSKGS 322 (494)
Q Consensus 267 ~~D~~~~~~hK~l~~----p~g~G~~~~~~~~~~~~~~~~~-~~y~~~-----------~----~---~~~~-~~~s~~~ 322 (494)
++|+++.++|||+++ ++++|++++++. .. ..+... ..+... . . ...+ ...+.+.
T Consensus 211 ~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~ 288 (398)
T cd00613 211 GADIVVGNLQKTGVPHGGGGPGAGFFAVKKE-LV-RFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQA 288 (398)
T ss_pred CCCEEEeeccccCCCCCCCCCceeEEEEhhh-hH-hhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHH
Confidence 699999999999832 367888887653 22 111110 000000 0 0 0000 0012223
Q ss_pred HHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCcee
Q 011057 323 SQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIV 402 (494)
Q Consensus 323 ~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v 402 (494)
......++++..++.++++++.++..++++++.++|++++.... ......++++|.+....+.+..+++++|.++|+++
T Consensus 289 ~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~ 367 (398)
T cd00613 289 LLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLP-FNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHA 367 (398)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-CCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccc
Confidence 44456667778888999999999999999999999999875432 21123455677764311245678999999999986
Q ss_pred eccccCCCCCCceEEEEEeccCCChHHHHHHHHHH
Q 011057 403 PAYTMPADAQHITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 403 ~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
.... +.+...+|++.+.++|++|+|++++.|
T Consensus 368 ~~~~----~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 368 PTMY----LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred cccc----cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 4321 123467999999999999999988754
No 50
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.96 E-value=1.8e-27 Score=238.96 Aligned_cols=318 Identities=18% Similarity=0.125 Sum_probs=230.7
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHH--H
Q 011057 91 PVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCW--E 168 (494)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~--~ 168 (494)
+.+.+..+++++.+++++|.+++ ...+.+|.+||+++..++.++..+ ++++++....++.. .
T Consensus 33 ~~~~~~~~~~~~~l~~l~~~~~~---~~~i~~~~~gt~~l~~~~~~l~~~-------------~~~vlv~~~~~~~~~~~ 96 (368)
T PRK13479 33 DDFNALTASVRAKLVAIATGEEG---YTCVPLQGSGTFSVEAAIGSLVPR-------------DGKVLVPDNGAYGARIA 96 (368)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCC---ceEEEEcCCcHHHHHHHHHhccCC-------------CCeEEEEeCCchHHHHH
Confidence 44556788899999999998642 134678889999999887776321 24666655555443 5
Q ss_pred HHHHHcCCeeEEEeccCCccccCHHHHHHhhhhC--CeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecc
Q 011057 169 KFARYFEVELKEVKLSEGYYVMDPVKAVEMVDEN--TICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAA 246 (494)
Q Consensus 169 ~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~--t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (494)
..++..|++++.++++++ +.+|+++++++++++ +++|.+++++|+||.+.|+++|.++|+++ +++++||++
T Consensus 97 ~~~~~~g~~~~~i~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~------~~~livDa~ 169 (368)
T PRK13479 97 QIAEYLGIAHVVLDTGED-EPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRH------GKRLIVDAM 169 (368)
T ss_pred HHHHHcCCcEEEEECCCC-CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHc------CCEEEEEcc
Confidence 778889999999998764 579999999998754 46788999999999999999999999999 999999988
Q ss_pred cccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCC-------CCCcccccC
Q 011057 247 SGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGAD-------QPTFTLNFS 319 (494)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~-------~~~~~~~~s 319 (494)
++.+..+ .++...++|++++++|||+++|.|+|+++++++. +.........|.... .......++
T Consensus 170 ~~~g~~~-------~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 241 (368)
T PRK13479 170 SSFGAIP-------IDIAELGIDALISSANKCIEGVPGFGFVIARRSE-LEACKGNSRSLSLDLYDQWAYMEKTGQWRFT 241 (368)
T ss_pred cccCCcc-------ccccccCceEEEecCccccccCCCceEEEECHHH-HHHhhcCCCCeeecHHHHHhhhcccCCCCCC
Confidence 8655332 2333346899999999999999999999987542 211111111111000 000011135
Q ss_pred cchHHHHHHHHHHHHhcHh-HHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-Ccc-EEEEEecCCCCCCHHHHHHHHH
Q 011057 320 KGSSQVIAQYYQLIRLGFE-GYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GVP-LVAFSLKDNKRHDEFEVAELLR 396 (494)
Q Consensus 320 ~~~~~~~a~~~al~~l~~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~-~v~f~~~~~~~~~~~~l~~~L~ 396 (494)
.+...++++.++++.+..+ +++++.+++.++++++++.|++++ ++++.++. ..+ +++|.+......+..++.++|.
T Consensus 242 ~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 320 (368)
T PRK13479 242 PPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALG-FEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERLK 320 (368)
T ss_pred CcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-CcccCCchhcCceEEEEECCCCCCcCHHHHHHHHH
Confidence 5556677888888877555 478888999999999999999995 88765431 233 4566654333356789999999
Q ss_pred hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 397 RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 397 ~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
++||.+..... .....+|++++.+++.++++++++.|+++++++
T Consensus 321 ~~gi~v~~g~~----~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 321 EQGFVIYPGKL----TQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred HCCEEEecCCC----CCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 99999854321 123479999877899999999999999988765
No 51
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=2.8e-27 Score=229.08 Aligned_cols=336 Identities=16% Similarity=0.138 Sum_probs=252.7
Q ss_pred hHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhc
Q 011057 69 EPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAE 148 (494)
Q Consensus 69 ~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~ 148 (494)
+|.+..++ .....+ ..+|.+..+.+++.+.|..+++.+.. ...+++.+||.++..++..+..+
T Consensus 17 ~~~V~~am----~~~~~~-h~s~~F~~~~~~~~~~L~~v~~t~~~----~~~ll~gsGt~amEAav~sl~~p-------- 79 (383)
T COG0075 17 PPRVLLAM----ARPMVG-HRSPDFVGIMKEVLEKLRKVFGTENG----DVVLLSGSGTLAMEAAVASLVEP-------- 79 (383)
T ss_pred CHHHHHHh----cCCCCC-CCCHHHHHHHHHHHHHHHHHhcCCCC----cEEEEcCCcHHHHHHHHHhccCC--------
Confidence 45554443 333333 46788999999999999999998731 34566677888887776666331
Q ss_pred CCCCCCCeEEeCCCcch--HHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhC--CeEEEEeeCCCCcccccCHHHH
Q 011057 149 GKPFDKPNIVTGANVQV--CWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDEN--TICVAAILGSTLNGEFEDVKLL 224 (494)
Q Consensus 149 g~~~~~~~vi~~~~~h~--s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~--t~~vv~~~~~~~tG~~~~l~~I 224 (494)
+++|++....-+ -|.+.++++|++++.+.++++ -.+|+++++++++++ .++|.++|..|+||.+.|+++|
T Consensus 80 -----gdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg-~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I 153 (383)
T COG0075 80 -----GDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWG-EAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEI 153 (383)
T ss_pred -----CCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCC-CCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHH
Confidence 256665555443 688899999999999999875 589999999999954 5789999999999999999999
Q ss_pred HHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCccccccccc
Q 011057 225 NDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHI 304 (494)
Q Consensus 225 ~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~ 304 (494)
+++|++| +.+++||++.+.|..++ ++...++|++...++|++++|+|.|++.++++..-.-.-...+
T Consensus 154 ~~~~k~~------g~l~iVDaVsS~Gg~~~-------~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~ 220 (383)
T COG0075 154 AKAAKEH------GALLIVDAVSSLGGEPL-------KVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHP 220 (383)
T ss_pred HHHHHHc------CCEEEEEecccCCCccc-------chhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCC
Confidence 9999999 99999999998765544 3444589999999999999999999999987543111101111
Q ss_pred CCCCC-------CCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-Cc-cE
Q 011057 305 NYLGA-------DQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GV-PL 375 (494)
Q Consensus 305 ~y~~~-------~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~-~~ 375 (494)
.|... ......+.+|++...+.++..+|+.+..+|++++.++++.++++++++++++| |+++.++. .+ .+
T Consensus 221 ~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alG-l~~~~~~~~~s~tv 299 (383)
T COG0075 221 SFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALG-LELFADPERRSPTV 299 (383)
T ss_pred ceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CccccCcccCCCce
Confidence 12111 00112345788888899999999999999999999999999999999999998 99887432 33 45
Q ss_pred EEEEecCCCCCCHHHHHHHHHh-cCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 376 VAFSLKDNKRHDEFEVAELLRR-FGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 376 v~f~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
+++.. +.+++..++...+.+ .|+.+.+...+ ....++||..+...+..++...+.+|+.++.++..
T Consensus 300 ta~~~--P~g~~~~~~~~~~~~~~g~~i~gg~~~---l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 300 TAIKV--PEGVDDKKVRRALLKEYGVEIAGGQGP---LKGKIFRIGHMGNVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred EEEEC--CCCCCcHHHHHHHHHhCCEEecccccc---cCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence 66666 345665445555554 58877554433 33468999999999999999999999999888754
No 52
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.96 E-value=1.1e-27 Score=234.27 Aligned_cols=323 Identities=18% Similarity=0.110 Sum_probs=247.4
Q ss_pred ChHHHHHHHHHHhcccCCCCCCCh---hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHH
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYP---VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNK 144 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~ 144 (494)
.+|.+.+++.+++.....+.+.++ +...+..++++.||+++|.+. +++.++|..||...+-++..+
T Consensus 54 ~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~-------al~f~SGy~AN~~~i~~l~~~---- 122 (388)
T COG0156 54 SHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEA-------ALLFSSGFVANLGLLSALLKK---- 122 (388)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc-------EEEEcccchhHHHHHHHhcCC----
Confidence 378898988888888655444443 777888888888999999986 788889999998776666332
Q ss_pred HHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhC-----CeEEEEeeCCC-Ccccc
Q 011057 145 RKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDEN-----TICVAAILGST-LNGEF 218 (494)
Q Consensus 145 ~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~-----t~~vv~~~~~~-~tG~~ 218 (494)
++.|+.+...|.|+...++..+++++.++ +.|+++|++.+.+. .+.++++.+.+ +.|.+
T Consensus 123 ---------~dli~~D~lnHASiidG~rls~a~~~~f~------HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdi 187 (388)
T COG0156 123 ---------GDLIFSDELNHASIIDGIRLSRAEVRRFK------HNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDI 187 (388)
T ss_pred ---------CcEEEEechhhhhHHHHHHhCCCcEEEec------CCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCc
Confidence 36788899999999999999999999997 46889999999762 13555555555 88999
Q ss_pred cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccC--CCceEEEEcCcccCCcCCceEEEEEeCCCCc
Q 011057 219 EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL--PLVKSINVSGHKYGLVYAGIGWVIWRNKEDL 296 (494)
Q Consensus 219 ~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~ 296 (494)
.||++|++++++| ++|++||+||+.|+..-........+++ ..+|++..++.|.++ +.|.+++.+....
T Consensus 188 ApL~~l~~L~~ky------~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG---s~Gg~v~g~~~~~ 258 (388)
T COG0156 188 APLPELVELAEKY------GALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG---SSGGYIAGSAALI 258 (388)
T ss_pred CCHHHHHHHHHHh------CcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhc---ccCceeeCcHHHH
Confidence 9999999999999 9999999999987642111112223333 346999999999986 3455555544222
Q ss_pred ccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEE
Q 011057 297 PEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLV 376 (494)
Q Consensus 297 ~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v 376 (494)
+|+......+.+..+.|+..+.+..++++.+.+. .++++++.++..++++.++..+ +.+... ..+|+
T Consensus 259 --------d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~--~~~r~~L~~~~~~~~~~~~~~~-~~~~~s--~s~I~ 325 (388)
T COG0156 259 --------DYLRNRARPFIFSTALPPAVAAAALAALRILEEG--PERRERLQELAAFFRSLLKALG-LVLLPS--ESPII 325 (388)
T ss_pred --------HHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHhcC-CccCCC--CCCee
Confidence 4444444555566667777777888888887644 4778889999999997777765 655333 56888
Q ss_pred EEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 377 AFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 377 ~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
.+.+.+ ...+..+...|.++||.+.....|+++.+...+|++++..+|.++|+++++.|.++
T Consensus 326 pv~~gd--~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 326 PVILGD--EERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred eeEeCC--HHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 888744 23467889999999999999999999999999999999999999999999888764
No 53
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=9e-27 Score=233.13 Aligned_cols=329 Identities=14% Similarity=0.082 Sum_probs=225.4
Q ss_pred CChHHHHHHHHHHhcccCCCCCC-----ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDE-----YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKW 141 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~ 141 (494)
+..|++.+++.++... ..+... ........+++++.+++++|.+. +++|+|+++++..++.++..+
T Consensus 12 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-------i~~~~g~t~al~~~l~~~~~~- 82 (361)
T cd06452 12 RLTPEARKALIEWGDG-YSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDE-------ARVTPGAREGKFAVMHSLCEK- 82 (361)
T ss_pred CCCHHHHHHHHHHhcc-cCCccccccccccccCchHHHHHHHHHHHcCCce-------EEEeCCHHHHHHHHHHHhcCC-
Confidence 4467788888777632 221111 10111234567777999999943 889999999998887766321
Q ss_pred HHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCC-ccccCHHHHHHhhhh-------CCeEEEEeeCCC
Q 011057 142 QNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEG-YYVMDPVKAVEMVDE-------NTICVAAILGST 213 (494)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~-------~t~~vv~~~~~~ 213 (494)
+++|+++..+|++...+++..|++++.++++++ ++.+|++++++++++ ++++|++++++|
T Consensus 83 ------------gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n 150 (361)
T cd06452 83 ------------GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDG 150 (361)
T ss_pred ------------CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCC
Confidence 257999999999988889999999999998754 358999999998863 678999999999
Q ss_pred CcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCC
Q 011057 214 LNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNK 293 (494)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~ 293 (494)
++|.+.|+++|.++|+++ ++++++|+||+.+..++. ....++|+++.++||++++|.++|+++++++
T Consensus 151 ~tG~~~~~~~i~~~~~~~------~~~vivD~a~~~g~~~~~-------~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~ 217 (361)
T cd06452 151 NYGNLHDAKKIAKVCHEY------GVPLLLNGAYTVGRMPVS-------GKELGADFIVGSGHKSMAASAPIGVLATTEE 217 (361)
T ss_pred CCeeeccHHHHHHHHHHc------CCeEEEECCcccCCcCCC-------HHHcCCCEEEecCCccccCCCCeEEEEECHH
Confidence 999999999999999999 999999999987544331 1112589999999999988889999887643
Q ss_pred CCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC-CC
Q 011057 294 EDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKD-EG 372 (494)
Q Consensus 294 ~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~ 372 (494)
.+.. +.....++....... +.++.....++.+++++..+. +.+ +...+..++++++.+.|+++++++++.+. ..
T Consensus 218 -~~~~-l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~al~~~~-~~~-~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~ 292 (361)
T cd06452 218 -WADI-VFRTSQMFKIKEVEL-LGCTLRGAPLVTLMASFPHVK-ERV-KRWDEEVEKARWFVAELEKIEGIKQLGEKPKN 292 (361)
T ss_pred -HHHH-Hhccccccccceeee-eccccCchHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHhcCCCeEEECCCCCC
Confidence 2222 111111111111010 112222234445556665442 222 34555566778999999999779987432 25
Q ss_pred ccEEEEEecCC------CCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 373 VPLVAFSLKDN------KRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 373 ~~~v~f~~~~~------~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
.+++.+....- ...+..++.+.|.++||.+ ..+ ....++|+++.. .+++++++++++|+++.
T Consensus 293 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~---~~~---~~~~~~ri~~~g-~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 293 HDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHG---IKP---GLTRYFKLSTYG-LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred CceEEEEcCCcchhhhhccccchhHHHHHHHcCceE---EcC---CCceEEEEEecC-CCHHHHHHHHHHHHHHh
Confidence 67887776310 0112346999999999984 122 123479999854 58899999999988654
No 54
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.96 E-value=4.3e-27 Score=235.21 Aligned_cols=330 Identities=17% Similarity=0.137 Sum_probs=233.3
Q ss_pred hHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhc
Q 011057 69 EPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAE 148 (494)
Q Consensus 69 ~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~ 148 (494)
++.+.+++...+ ..+ .+.+.++.+++++.+++++|.+++ ...+.++.|||+++..++..+...
T Consensus 11 ~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~la~~~~~~~~---~~~i~~~~~gt~~l~~~~~~~~~~-------- 73 (355)
T TIGR03301 11 SATVRDAMLVDW----CHW--DSEFNDVTDQVRDRLLALAGGDDN---HTCVLLQGSGTFAVEATIGSLVPR-------- 73 (355)
T ss_pred CHHHHHHhhhhc----cCC--CHHHHHHHHHHHHHHHHHhcCCCC---CcEEEEeCCcHHHHHHHHHhccCC--------
Confidence 456666665522 222 234457788899999999999862 124678899999999887776321
Q ss_pred CCCCCCCe-EEeCCCcchH-HHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhC--CeEEEEeeCCCCcccccCHHHH
Q 011057 149 GKPFDKPN-IVTGANVQVC-WEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDEN--TICVAAILGSTLNGEFEDVKLL 224 (494)
Q Consensus 149 g~~~~~~~-vi~~~~~h~s-~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~--t~~vv~~~~~~~tG~~~~l~~I 224 (494)
+++ ++++...|.. +..+++..|++++.++.+++ +.+|++++++++.++ ++.|++++++|++|.+.|+++|
T Consensus 74 -----~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i 147 (355)
T TIGR03301 74 -----DGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEY-EPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAI 147 (355)
T ss_pred -----CCeEEEECCCchhhHHHHHHHHcCCceEEEecCCC-CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHH
Confidence 234 4455555544 56778889999999998764 689999999999754 4577788999999999999999
Q ss_pred HHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCccccccccc
Q 011057 225 NDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHI 304 (494)
Q Consensus 225 ~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~ 304 (494)
+++|+++ ++++++|++++.+..++ ++...++|++..++|||++++.|+|+++++++ .+........
T Consensus 148 ~~l~~~~------~~~livD~~~s~g~~~~-------~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~-~~~~~~~~~~ 213 (355)
T TIGR03301 148 AKVARSH------GAVLIVDAMSSFGAIPI-------DIEELDVDALIASANKCLEGVPGFGFVIARRD-LLEASAGNAR 213 (355)
T ss_pred HHHHHHc------CCEEEEEeccccCCccc-------chhhcCccEEEecCCcccccCCceeEEEECHH-HHHHhhCCCC
Confidence 9999999 99999999887654332 33334789999999999989999999998764 2211110000
Q ss_pred CCCCCC-------CCCcccccCcchHHHHHHHHHHHHhcHhH-HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-Ccc-
Q 011057 305 NYLGAD-------QPTFTLNFSKGSSQVIAQYYQLIRLGFEG-YRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GVP- 374 (494)
Q Consensus 305 ~y~~~~-------~~~~~~~~s~~~~~~~a~~~al~~l~~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~- 374 (494)
.+.... .......++.+.....++.++++.+..+| +++..+++.++++++.+.|++++ ++++.++. ..+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~~~~~~~~~ 292 (355)
T TIGR03301 214 SLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALG-FQPLLPERWQSPI 292 (355)
T ss_pred CceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcC-CeeecCCCCCCCc
Confidence 110000 00001123455556677778888887766 88889999999999999999985 88665432 233
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 375 LVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
+++|.++.....+..++.++|.++|+.+...... ...++|++++.+++.++++++++.|+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~----~~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 293 IVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLT----LADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred EEEEECCCCCcchHHHHHHHHHHCCEEEECCccc----cccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 4566664322245678999999999987543211 1257999998889999999999998865
No 55
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.2e-26 Score=231.88 Aligned_cols=346 Identities=18% Similarity=0.161 Sum_probs=245.6
Q ss_pred CCCcccccccCCChH-HHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHH
Q 011057 56 PRLNLASFVTTWMEP-ECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAG 134 (494)
Q Consensus 56 ~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~ 134 (494)
..++|+.+.++.+.| .+.+++.+++......|....|..+|++.+.+++.+.+|.+.+. ...+++|+|+++|++.++
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~--~~eiivt~Ga~~al~~~~ 106 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDP--EEEIIVTAGAKEALFLAF 106 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCeEEEeCCHHHHHHHHH
Confidence 456777777765544 58888888887653255577899999999999999999965532 133999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC--CccccCHHHHHHhhhhCCeEEEEeeCC
Q 011057 135 LAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE--GYYVMDPVKAVEMVDENTICVAAILGS 212 (494)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~--~~~~~d~~~L~~~i~~~t~~vv~~~~~ 212 (494)
.+..+. +++|+++++.+.++.....+.|++++.++++. ++|.+|+++|+++++++|++|++++|+
T Consensus 107 ~a~~~p-------------GDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~ 173 (393)
T COG0436 107 LALLNP-------------GDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPN 173 (393)
T ss_pred HHhcCC-------------CCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCC
Confidence 988552 36899999999999999999999999999853 359999999999999999999999999
Q ss_pred CCccccc---CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc--cccc--CCCceEEEEcCcccCCcCCce
Q 011057 213 TLNGEFE---DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE--WDFR--LPLVKSINVSGHKYGLVYAGI 285 (494)
Q Consensus 213 ~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~--~~~~D~~~~~~hK~l~~p~g~ 285 (494)
||||.+. .+++|+++|++| ++|++.|++|..+.. ...... ..+. .+.+-++...++-+.++++++
T Consensus 174 NPTGav~~~~~l~~i~~~a~~~------~i~ii~DEiY~~l~y--d~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRv 245 (393)
T COG0436 174 NPTGAVYSKEELKAIVELAREH------DIIIISDEIYEELVY--DGAEHPSILELAGARDRTITINSFSKTYGMTGWRI 245 (393)
T ss_pred CCcCcCCCHHHHHHHHHHHHHc------CeEEEEehhhhhccc--CCCCcCCHhhcCCCcceEEEEecccccccccccce
Confidence 9999994 478899999999 999999999988643 110011 1111 123444444444567899999
Q ss_pred EEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH----hHHHHHHHHHHHHHHHHHHHHhhC
Q 011057 286 GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF----EGYRNVMENCHENAMVLKEGLEKT 361 (494)
Q Consensus 286 G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~----~g~~~~~~~~~~~a~~l~~~L~~~ 361 (494)
||++..++... ..+.....+. ........+.+++.++.. ...+...+...++++.+.+.|.++
T Consensus 246 G~~v~~~~~l~-~~~~~~~~~~------------~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~ 312 (393)
T COG0436 246 GWVVGPPEELI-AALRKLKSYL------------TSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEI 312 (393)
T ss_pred eEeecChHHHH-HHHHHHHHhc------------ccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99987643232 2111111111 112345567777777652 355666678889999999999999
Q ss_pred CCeEEeecCCCccEEEE-EecCCCCCCHHHHHHHHHhc-CceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHH
Q 011057 362 GRFNIVSKDEGVPLVAF-SLKDNKRHDEFEVAELLRRF-GWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITK 439 (494)
Q Consensus 362 ~~~~~~~~~~~~~~v~f-~~~~~~~~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~ 439 (494)
+++.+..++ ...++.| .+.. ..+..+++++|.++ |+.+......+...|.+++|+++... .++++..++.|++
T Consensus 313 ~g~~~~~~p-~Ga~Y~~~~i~~--~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~--~~~l~~a~~rl~~ 387 (393)
T COG0436 313 GGLSVVKPP-EGAFYLFPKIPE--LLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATS--EETLEEALRRLAR 387 (393)
T ss_pred CCeeeccCC-CeeEEEEeecCC--CCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecC--HHHHHHHHHHHHH
Confidence 989988755 3455554 4432 25788999887765 57664333322223567999998752 3555554544444
Q ss_pred HHH
Q 011057 440 VLH 442 (494)
Q Consensus 440 ~~~ 442 (494)
.++
T Consensus 388 ~~~ 390 (393)
T COG0436 388 FLA 390 (393)
T ss_pred HHH
Confidence 443
No 56
>PRK07179 hypothetical protein; Provisional
Probab=99.96 E-value=4.6e-27 Score=238.93 Aligned_cols=327 Identities=13% Similarity=0.059 Sum_probs=229.8
Q ss_pred CChHHHHHHHHHHhcccCCCC---CCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDM---DEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQN 143 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~ 143 (494)
..+|++.+++.++++..+.+. ..+........++++.|++++|.+. +++++||++|+..++.++...
T Consensus 68 ~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~-------~~~~~sG~~An~~~l~~l~~~--- 137 (407)
T PRK07179 68 SGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFES-------CLLCQSGWAANVGLLQTIADP--- 137 (407)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHhCCC---
Confidence 457889998888886542221 1111222344556678999999864 688999999999888776321
Q ss_pred HHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh-CCeEEEEeeCCCCcccccCHH
Q 011057 144 KRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAAILGSTLNGEFEDVK 222 (494)
Q Consensus 144 ~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~~~~~~tG~~~~l~ 222 (494)
++.|+++...|.++...++..|+++..++ ..|+++|++++++ ++++|++..+++++|.+.|++
T Consensus 138 ----------g~~v~~~~~~h~s~~~~~~~~g~~~~~~~------~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~ 201 (407)
T PRK07179 138 ----------NTPVYIDFFAHMSLWEGVRAAGAQAHPFR------HNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLA 201 (407)
T ss_pred ----------CCEEEEECCcCHHHHHHHHHCCCeEEEec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHH
Confidence 25788899999999888888888765553 3689999999986 477888888999999999999
Q ss_pred HHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccC-CCceEEEEcCcccCCcCCceEEEEEeCCCCcccccc
Q 011057 223 LLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL-PLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELI 301 (494)
Q Consensus 223 ~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~ 301 (494)
+|.++|+++ ++++|+|++|+.+..+.........++. .++|+++.++||++.+ ++|++++++. .. ..+.
T Consensus 202 ~I~~l~~~~------~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~--~~G~l~~~~~-~~-~~~~ 271 (407)
T PRK07179 202 DIVDIAEEF------GCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG--RAGIITCPRE-LA-EYVP 271 (407)
T ss_pred HHHHHHHHc------CCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc--cCeEEEeCHH-HH-HHHH
Confidence 999999999 9999999999865321110000111222 3579999999999854 4788776542 21 1111
Q ss_pred cccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEec
Q 011057 302 FHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLK 381 (494)
Q Consensus 302 ~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~ 381 (494)
.. .+ ...+.++.+...++++.++++.+... .+..+++.+++++|++.|++++ +++.. ..+++.+.+.
T Consensus 272 ~~-~~------~~~~~~t~~~~~~aa~~aal~~~~~~--~~~~~~l~~~~~~l~~~L~~~g-~~v~~---~~~i~~l~~~ 338 (407)
T PRK07179 272 FV-SY------PAIFSSTLLPHEIAGLEATLEVIESA--DDRRARLHANARFLREGLSELG-YNIRS---ESQIIALETG 338 (407)
T ss_pred Hh-Cc------CeeeCCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCC---CCCEEEEEeC
Confidence 10 00 01122344344555555666665332 4567889999999999999985 77662 3477777763
Q ss_pred CCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 382 DNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 382 ~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
. ..+...+.+.|.++|+.++.+..|....+..++|++++..+|.+|++++++.|++++++.
T Consensus 339 ~--~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 339 S--ERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred C--HHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 2 124567889999999987655555544456789999999999999999999999887764
No 57
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.96 E-value=4.9e-27 Score=238.03 Aligned_cols=343 Identities=17% Similarity=0.085 Sum_probs=235.8
Q ss_pred cCCCCCccccccc--CCChHHHHHHHHHHhcccCCCCCCCh---hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 53 DGNPRLNLASFVT--TWMEPECDKLMMAAINKNYVDMDEYP---VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 53 ~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
++.+.++|+++.+ ..++|++.+++.+++......+..++ +...+..++++.+|+++|.+. +++++||+
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~~-------~ii~~~~~ 108 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGTED-------TILYASCF 108 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCc-------EEEECchH
Confidence 4444555555432 23467888888888876433344444 556667778888999999864 77788999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh------
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE------ 201 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------ 201 (494)
+|+..++.++.. .+++|+++.++|.++...++..+.....++ .+|+++|++++.+
T Consensus 109 ~a~~~~~~~l~~-------------~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~------~~d~~~l~~~i~~~~~~~~ 169 (393)
T TIGR01822 109 DANGGLFETLLG-------------AEDAIISDALNHASIIDGVRLCKAKRYRYA------NNDMADLEAQLKEARAAGA 169 (393)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEeccccHHHHHHHHhcCCceEEeC------CCCHHHHHHHHHhhhhcCC
Confidence 999866655522 126899999999999998888887764443 4789999998875
Q ss_pred CCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc-CCCceEEEEcCcccCC
Q 011057 202 NTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGL 280 (494)
Q Consensus 202 ~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~hK~l~ 280 (494)
++++|++.++.+++|.+.|+++|+++|+++ ++++++|++|+.+..+..........+ ..++|+++.++||++.
T Consensus 170 ~~~~v~~~~v~~~tG~~~~l~~i~~la~~~------~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~ 243 (393)
T TIGR01822 170 RHRLIATDGVFSMDGVIAPLDEICDLADKY------DALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALG 243 (393)
T ss_pred CceEEEEeCCccCCCCcCCHHHHHHHHHHc------CCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhh
Confidence 677888888889999999999999999999 999999999975543211000000111 1368999999999976
Q ss_pred cCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhh
Q 011057 281 VYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEK 360 (494)
Q Consensus 281 ~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~ 360 (494)
+ ++.|+++.+. ... ..+... ...+.+.++.+.....+..++++.+ +..++..+++.++++++.+.|++
T Consensus 244 g-~r~G~~~~~~-~~~-~~l~~~-------~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~ 311 (393)
T TIGR01822 244 G-ASGGFTTARK-EVV-ELLRQR-------SRPYLFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEA 311 (393)
T ss_pred C-CCcEEEEeCH-HHH-HHHHHh-------CccceecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHH
Confidence 4 4668876543 222 211110 0011122333333444455566554 23456778889999999999988
Q ss_pred CCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 361 TGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
.+ +++..+ ..+++.+.+.+ ..+..++++.|.++|+.+....+|....+...+|++++..++.++++++++.|+++
T Consensus 312 ~g-~~~~~~--~~~~~~i~~~~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~ 386 (393)
T TIGR01822 312 AG-FDIKPA--DHPIIPVMLYD--AVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRI 386 (393)
T ss_pred cC-CCCCCC--CCCEEEEEeCC--HHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 74 776532 34666666532 23467899999999998865545433334557999999999999999999999988
Q ss_pred HHHH
Q 011057 441 LHEL 444 (494)
Q Consensus 441 ~~~l 444 (494)
++++
T Consensus 387 ~~~~ 390 (393)
T TIGR01822 387 GREL 390 (393)
T ss_pred HHHh
Confidence 7654
No 58
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.96 E-value=9.1e-27 Score=233.22 Aligned_cols=379 Identities=17% Similarity=0.128 Sum_probs=246.9
Q ss_pred hcCCCCCCCCCCCCHHHHHHHHHHhhhhcCCCCCcccccccCCChHHHHHHHHHH----hccc------CC--CC--CCC
Q 011057 25 NSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAA----INKN------YV--DM--DEY 90 (494)
Q Consensus 25 ~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~----~~~~------~~--~~--~~~ 90 (494)
..+..-.+|++|.+.+.+...+.++..++.+...+..+ +.- -...+.-.+.+- +... .. .+ ..+
T Consensus 23 ~~~~~~~~p~~g~~~~~i~~~l~~l~~~~~~~~~~~~~-~ge-re~rv~~~~~~~~~~~~~hgigr~~~l~~~q~ka~gs 100 (444)
T TIGR03531 23 RLLEQRKIPEEGWDDETIELFLHELSVMDTNNFPNNVG-VGE-REGRVFSKLVARRHYRFCHGIGRSGDLVAPQPKAAGS 100 (444)
T ss_pred HHHHcCcCCccCCCHHHHHHHHHHHhcCCcCCCccccC-cCc-ccceeechhhhhcccceecCCCCcccccccCccccCc
Confidence 44555589999999999999888887766544321000 000 001111111110 1000 00 01 112
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh-HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH
Q 011057 91 PVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS-EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK 169 (494)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt-~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (494)
+....+.+++.+++++++|.+.. ..+++++++| .++.+++.+++.+ ....++||+++.+|.+..+
T Consensus 101 s~~~~l~~~~e~~~~~~~G~~~~----~~a~~v~~~Tg~al~laL~alr~~----------~~~gd~VI~p~~th~S~~k 166 (444)
T TIGR03531 101 SLLYKLTNKLVKDFLKLLGLRSI----KSAFVVPLATGMSLSLCLSALRHK----------RPKAKYVIWPRIDQKSCIK 166 (444)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCC----CEEEEECCHHHHHHHHHHHHcCCc----------CCCCCEEEEECcChHHHHH
Confidence 34678888899999999999731 2378889999 7888887776421 0113589999999999999
Q ss_pred HHHHcCCeeEEEec--cCCccccCHHHHHHhhhh---CCeEEEEeeCC-CCcccccCHHHHHHHHHHhhcccCCCceEEE
Q 011057 170 FARYFEVELKEVKL--SEGYYVMDPVKAVEMVDE---NTICVAAILGS-TLNGEFEDVKLLNDLLAEKNKETGWDTPIHV 243 (494)
Q Consensus 170 ~~~~~G~~v~~v~~--~~~~~~~d~~~L~~~i~~---~t~~vv~~~~~-~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (494)
++.++|++++.+++ +++++.+|+++|+++|++ ++++++++.++ +..|..+|+++|+++|++| ++|+|+
T Consensus 167 Ai~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~------gI~lIv 240 (444)
T TIGR03531 167 AISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANY------DIPHIV 240 (444)
T ss_pred HHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHc------CCEEEE
Confidence 99999999999995 556689999999999986 34555555444 4557899999999999999 999999
Q ss_pred ecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchH
Q 011057 244 DAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSS 323 (494)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~ 323 (494)
|+||+.+.. +........+....+|++++++||+++.|.+.|+++++++... ..+. ..|.+ .....
T Consensus 241 DaAyg~~~~-~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~-~~i~--~~y~g----------~~~~s 306 (444)
T TIGR03531 241 NNAYGLQSN-KYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFI-QEIS--KSYPG----------RASAS 306 (444)
T ss_pred ECcCcCcCh-hhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHH-HHHH--HhccC----------CCCCh
Confidence 999996431 1111111112223589999999999999888777777776544 2221 12321 11224
Q ss_pred HHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC---CeEEeecCCCccE-EEEEecCCCCCCHHHHHHHHHhcC
Q 011057 324 QVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTG---RFNIVSKDEGVPL-VAFSLKDNKRHDEFEVAELLRRFG 399 (494)
Q Consensus 324 ~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~~-v~f~~~~~~~~~~~~l~~~L~~~G 399 (494)
....+|+++..+|.+++++++++..++++++.+.|+++. +.+++..+. .+| +++.+....+.+...+...|..++
T Consensus 307 ~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~-n~is~~~~~~~~~~~~~~~~g~~l~~~~ 385 (444)
T TIGR03531 307 PSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPE-NPISSAMTLSTLKGKDPTMLGSMLYSRR 385 (444)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCC-CceeEEEecccccccCHHHHHHHHHhCC
Confidence 567789999999999999999999999999999998763 245664432 222 233433222345778889998888
Q ss_pred ceeeccccCCCC---CC--------------ceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 400 WIVPAYTMPADA---QH--------------ITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 400 i~v~~~~~~~~~---~~--------------~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
+.-...+.|+.. .+ ..++-++....++++|+|.|++.|+++
T Consensus 386 v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 386 VTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred CCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 743222222221 11 012222333356888999998888765
No 59
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.96 E-value=2.1e-26 Score=230.88 Aligned_cols=301 Identities=15% Similarity=0.124 Sum_probs=210.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcC
Q 011057 96 LQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFE 175 (494)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G 175 (494)
...++++.+|+++|.+. ..+++|+++++..++.++..+ ++.|+++...|++...+++..|
T Consensus 52 ~~~~~~e~lA~~~g~~~-------~~i~~g~~~a~~~~~~~l~~~-------------gd~Vl~~~~~h~s~~~~~~~~g 111 (370)
T TIGR02539 52 PIHDFLEDLAEFLGMDE-------ARVTHGAREGKFAVMHALCKE-------------GDWVVLDGLAHYTSYVAAERAG 111 (370)
T ss_pred HHHHHHHHHHHHhCCCc-------eEEECChHHHHHHHHHHhhCC-------------CCEEEECCcccHHHHHHHHHcC
Confidence 44456777999999975 677999999998877766321 2679999999998888899999
Q ss_pred CeeEEEeccC-CccccCHHHHHHhhhh-------CCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccc
Q 011057 176 VELKEVKLSE-GYYVMDPVKAVEMVDE-------NTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAAS 247 (494)
Q Consensus 176 ~~v~~v~~~~-~~~~~d~~~L~~~i~~-------~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~ 247 (494)
++++.++.++ +++.+|+++|++++.+ ++++|+++++++++|.+.|+++|.++|+++ +++++||+||
T Consensus 112 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~------~~~livDea~ 185 (370)
T TIGR02539 112 LNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREK------GVPLLLNCAY 185 (370)
T ss_pred CEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHc------CCeEEEECcc
Confidence 9999999863 2478999999999863 578899999999999999999999999999 9999999999
Q ss_pred ccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHH
Q 011057 248 GGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIA 327 (494)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a 327 (494)
+.+..+. +....++|+++.++|||++++.++|++++++. .+ +.+.....+..-.... .+.++.......+
T Consensus 186 ~~g~~~~-------~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~-~i-~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~ 255 (370)
T TIGR02539 186 TVGRMPV-------SAKEIGADFIVGSGHKSMAASGPCGVLGMSEE-WE-DIVLRKSRYSPVKEVE-LLGCTSRGAPIVT 255 (370)
T ss_pred ccCCcCC-------CHHHcCCCEEEeeCcccccCCCCEEEEEECHH-HH-hhhcccccCCccceee-eecccccccHHHH
Confidence 9764322 11112589999999999987777898887543 32 2221111111111000 0111222223444
Q ss_pred HHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEee-cCCCccEEEEEecCC------CCCCHHHHHHHHHhcCc
Q 011057 328 QYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVS-KDEGVPLVAFSLKDN------KRHDEFEVAELLRRFGW 400 (494)
Q Consensus 328 ~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~~v~f~~~~~------~~~~~~~l~~~L~~~Gi 400 (494)
+++++... .+.+ +...+..+++++|+++|++++ ++++. .++..+++.+.++.. +..+...+.++|.++||
T Consensus 256 ~~~al~~~-~~~l-~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI 332 (370)
T TIGR02539 256 MMASFPHV-VERV-KRWDEEVKKTRWFVAELEDIG-FIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGI 332 (370)
T ss_pred HHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHhCC-cEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCC
Confidence 44444322 2222 233444556779999999997 88753 233678888876421 01134579999999999
Q ss_pred e-eeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 401 I-VPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 401 ~-v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
. ++ + ....++|++++ ..+.++++++++.|++++++
T Consensus 333 ~~ir----~---~~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 333 HGIR----S---GQTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred cccc----C---CcceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 6 32 2 12358999985 46999999999999988764
No 60
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.95 E-value=3.1e-26 Score=229.85 Aligned_cols=332 Identities=15% Similarity=0.037 Sum_probs=230.7
Q ss_pred CChHH-HHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeec-ChhHHHHHHHHHHHHHHHHH
Q 011057 67 WMEPE-CDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTV-GSSEAIMLAGLAFKRKWQNK 144 (494)
Q Consensus 67 ~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~-ggt~a~~~a~~a~~~~~~~~ 144 (494)
..+|. +.+++...+- .....++.+.++.+++++.+++++|.+.. ..+++++ +||+++..++..+...
T Consensus 22 ~~~~~~v~~a~~~~~~---~~~hr~~~f~~~~~~~r~~l~~l~~~~~~----~~v~~~~gs~T~~~~~~~~~l~~~---- 90 (378)
T PRK03080 22 KKRPGWQLEALADALL---GRSHRQKPVKALLKRVIEGTRELLSLPEG----YEVGIVPGSDTGAWEMALWSLLGA---- 90 (378)
T ss_pred CCChHHHHHHHHhhhc---ccCcCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEECCchHHHHHHHHHhcCCC----
Confidence 34455 7777764432 11223457788889999999999998641 2477775 8999998777665210
Q ss_pred HHhcCCCCCCCeEEeCCCcchH-HHH-HHHHcCC-eeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCH
Q 011057 145 RKAEGKPFDKPNIVTGANVQVC-WEK-FARYFEV-ELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDV 221 (494)
Q Consensus 145 ~~~~g~~~~~~~vi~~~~~h~s-~~~-~~~~~G~-~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l 221 (494)
.+..++. ...|.+ +.. +++..|+ +++.++.+++ ..+|+++++ . ++.|.+++.+|.||.+.|+
T Consensus 91 --------~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~g-~~~d~~~i~----~-~~~V~~~h~~t~tG~~~pi 155 (378)
T PRK03080 91 --------RRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEADYG-SLPDLSAVD----F-DRDVVFTWNGTTTGVRVPV 155 (378)
T ss_pred --------CcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCCC-CCCCHhhcC----C-CCCEEEEecCCccceeccc
Confidence 0124444 456654 333 3467899 9999988764 578877643 2 5678999999999999999
Q ss_pred HHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccc
Q 011057 222 KLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELI 301 (494)
Q Consensus 222 ~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~ 301 (494)
++|++ |++ |++++||++++.+..|+ ++. .+|++.+++|||+++|+|+|+++++++.. ....+
T Consensus 156 ~~I~~--~~~------g~~~vVDa~qs~G~~pi-------dv~--~iD~~~~s~~K~l~~P~G~g~l~v~~~~~-~~~~p 217 (378)
T PRK03080 156 ARWIG--ADR------EGLTICDATSAAFALPL-------DWS--KLDVYTFSWQKVLGGEGGHGMAILSPRAV-ERLES 217 (378)
T ss_pred hhhcc--ccC------CCeEEEecccccccCCC-------CHH--HCcEEEEehhhhCCCCCceEEEEECHHHH-Hhhhc
Confidence 99999 778 99999999999887654 332 48999999999999999999999986422 11111
Q ss_pred cc-----cCCCCCCC--------CCcccccCcchHHHHHHHHHHHHhcHh-HHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Q 011057 302 FH-----INYLGADQ--------PTFTLNFSKGSSQVIAQYYQLIRLGFE-GYRNVMENCHENAMVLKEGLEKTGRFNIV 367 (494)
Q Consensus 302 ~~-----~~y~~~~~--------~~~~~~~s~~~~~~~a~~~al~~l~~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 367 (494)
.. +.|+.... ......++.+...+.++.++|+.+.+. |++++.++..++++++++.|+++++++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~ 297 (378)
T PRK03080 218 YTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPL 297 (378)
T ss_pred ccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccc
Confidence 11 11110000 000111344445556678899999887 89999999999999999999999877776
Q ss_pred ec-C-C-CccEEEEEecCCC-CCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 368 SK-D-E-GVPLVAFSLKDNK-RHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 368 ~~-~-~-~~~~v~f~~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
.. + . ...+++|++++.+ +.+ .++..+|.++|+++...... ....++|+|++.+++.+|++++++.|+++++.
T Consensus 298 ~~~~~~~s~~i~~~~~~~~~~~~~-~~~~~~l~~~~i~v~~g~~~---~~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 373 (378)
T PRK03080 298 VADPATRSNTSVTLDFVDAQAAVD-AAAVAKLLRENGAVDIEPYR---DAPNGLRIWCGPTVEPADVEALTPWLDWAFER 373 (378)
T ss_pred cCCccccCccEEEEEcCCchHHHH-HHHHHHHHHcCCeecccccc---CCCCcEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 42 2 1 2357888874310 122 35677777788876432211 12357999999999999999999999999887
Q ss_pred Hhc
Q 011057 444 LDS 446 (494)
Q Consensus 444 l~~ 446 (494)
++.
T Consensus 374 ~~~ 376 (378)
T PRK03080 374 LKA 376 (378)
T ss_pred Hhh
Confidence 754
No 61
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.95 E-value=7.2e-26 Score=246.34 Aligned_cols=345 Identities=15% Similarity=0.072 Sum_probs=241.3
Q ss_pred HHHHHHHHHHhcc---cCCC-CCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 011057 70 PECDKLMMAAINK---NYVD-MDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKR 145 (494)
Q Consensus 70 p~~~~~~~~~~~~---~~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~ 145 (494)
..+.+++..++.. |+.. +..+....++.+++++.+++++|.+++ ...++||+|+|+|+.+++..+. +.
T Consensus 49 ~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~---~~~VvFtsnaT~alnlva~~l~--~~--- 120 (805)
T PLN02724 49 SQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPS---DYACVFTSGATAALKLVGETFP--WS--- 120 (805)
T ss_pred HHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCcc---ceEEEEeCChHHHHHHHHHHCC--CC---
Confidence 3566666555433 2221 122345667778899999999999752 1247999999999987755441 10
Q ss_pred HhcCCCCCCCeEEeCCCcchHHH---HHHHHcCCeeEEEeccC-------CccccCH--HHHHHhhh----------hCC
Q 011057 146 KAEGKPFDKPNIVTGANVQVCWE---KFARYFEVELKEVKLSE-------GYYVMDP--VKAVEMVD----------ENT 203 (494)
Q Consensus 146 ~~~g~~~~~~~vi~~~~~h~s~~---~~~~~~G~~v~~v~~~~-------~~~~~d~--~~L~~~i~----------~~t 203 (494)
.+++|+++...|.++. ..++..|++++.++++. +.+.+++ ++|++.+. ++|
T Consensus 121 -------~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t 193 (805)
T PLN02724 121 -------SESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAY 193 (805)
T ss_pred -------CCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCc
Confidence 1258888888897544 44556699999998761 1234443 56766542 456
Q ss_pred eEEEEeeCCCCcccccCHHHHHHHHHHhhccc---CCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCC
Q 011057 204 ICVAAILGSTLNGEFEDVKLLNDLLAEKNKET---GWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL 280 (494)
Q Consensus 204 ~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~---~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~ 280 (494)
++|++++.+|.+|.+.|+++|..+++... ++ ..+++++||+||+.+..++ |+...++|++++++|||++
T Consensus 194 ~LVa~~~vsN~tG~i~pi~~i~~~~~~~~-~~~~~~g~~~v~vDaaQ~~g~~pi-------Dv~~~~~Dfl~~S~HK~~G 265 (805)
T PLN02724 194 NLFAFPSECNFSGAKFPLDLVKLIKDNQH-SNFSKSGRWMVLLDAAKGCGTSPP-------DLSRYPADFVVVSFYKIFG 265 (805)
T ss_pred ceEEEEccccCCCCcCCHHHHHHHHHhcc-cccccCcceEEEeehhhhcCCCCC-------ChhhcCCCEEEEecceecc
Confidence 89999999999999999998765554320 00 0035799999999876644 4544579999999999998
Q ss_pred cCCceEEEEEeCCCCcccccccccCCCCCCC------------------CCcccccCcchHHHHHHHHHHHHhcHhHHHH
Q 011057 281 VYAGIGWVIWRNKEDLPEELIFHINYLGADQ------------------PTFTLNFSKGSSQVIAQYYQLIRLGFEGYRN 342 (494)
Q Consensus 281 ~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~------------------~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~ 342 (494)
+|.|+|+++++++.. . . ..+.+.++.. ..+ -.||.+...++++.++++.+...|+++
T Consensus 266 gP~G~G~L~vr~~~~-~-~--l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rf-E~GT~n~~~i~~l~aal~~l~~ig~~~ 340 (805)
T PLN02724 266 YPTGLGALLVRRDAA-K-L--LKKKYFGGGTVAASIADIDFVKRRERVEQRF-EDGTISFLSIAALRHGFKLLNRLTISA 340 (805)
T ss_pred CCCCceEEEEehhhh-h-h--hcCCccCCCceEEEecccceeeccccHHHHh-cCCCcchhHHHHHHHHHHHHHHhChHH
Confidence 899999999987521 1 1 1122222210 011 137888888899999999998888999
Q ss_pred HHHHHHHHHHHHHHHHhhCC------CeEEeecC-------CCccEEEEEecCCCC--CCHHHHHHHHHhcCceeecccc
Q 011057 343 VMENCHENAMVLKEGLEKTG------RFNIVSKD-------EGVPLVAFSLKDNKR--HDEFEVAELLRRFGWIVPAYTM 407 (494)
Q Consensus 343 ~~~~~~~~a~~l~~~L~~~~------~~~~~~~~-------~~~~~v~f~~~~~~~--~~~~~l~~~L~~~Gi~v~~~~~ 407 (494)
+.++..++++++.+.|++++ +++++.+. .+.++++|.+.+..+ +...++...+..+||.+++...
T Consensus 341 I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~ 420 (805)
T PLN02724 341 IAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCF 420 (805)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccc
Confidence 99999999999999999986 47777542 267899999876432 3345566666778999865443
Q ss_pred CCCC--------------------------------CCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 408 PADA--------------------------------QHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 408 ~~~~--------------------------------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
.... ...+++|+|++.++|.+|||+|++.|++.+-
T Consensus 421 Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 421 CNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred cCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 2100 0136899999999999999999999998663
No 62
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.95 E-value=1.8e-25 Score=223.74 Aligned_cols=342 Identities=15% Similarity=0.102 Sum_probs=236.9
Q ss_pred Ccccc--cccCCChHHHHHHHHHHhcccCCCCCCCh---hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHH
Q 011057 58 LNLAS--FVTTWMEPECDKLMMAAINKNYVDMDEYP---VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIML 132 (494)
Q Consensus 58 ~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~ 132 (494)
++|++ |.....+|++.++..+++...+.+...++ +...+.+++++.||+++|.+. .++.++|..||+.
T Consensus 105 l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~-------all~sSGy~AN~~ 177 (476)
T PLN02955 105 LLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKED-------CLVCPTGFAANMA 177 (476)
T ss_pred EEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCc-------EEEECChHHHHHH
Confidence 44555 33334579999999999888665554444 777788888899999999986 8899999999997
Q ss_pred HHHHHHHHH--HHHHHhcCC--CCCCCeEEeCCCcchHHHHHHHHc----CCeeEEEeccCCccccCHHHHHHhhhhC--
Q 011057 133 AGLAFKRKW--QNKRKAEGK--PFDKPNIVTGANVQVCWEKFARYF----EVELKEVKLSEGYYVMDPVKAVEMVDEN-- 202 (494)
Q Consensus 133 a~~a~~~~~--~~~~~~~g~--~~~~~~vi~~~~~h~s~~~~~~~~----G~~v~~v~~~~~~~~~d~~~L~~~i~~~-- 202 (494)
++.++.... ... .+. ...++.|+++...|.|+...+++. ++++..++ +.|+++|++++...
T Consensus 178 ~i~aL~~~~~~~~~---~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~------HND~~~Le~~L~~~~~ 248 (476)
T PLN02955 178 AMVAIGSVASLLAA---SGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYR------HCDMYHLNSLLSSCKM 248 (476)
T ss_pred HHHHHhhccccccc---cccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeC------CCCHHHHHHHHHhCCC
Confidence 776652100 000 000 011246888999999999999987 46666665 46889998888642
Q ss_pred CeEEEEeeC-CCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc-CCCceEEEEcCcccCC
Q 011057 203 TICVAAILG-STLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGL 280 (494)
Q Consensus 203 t~~vv~~~~-~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~hK~l~ 280 (494)
...++++.+ -++.|.+.|+++|.++|++| +++++||+||+.|+...........++ ...+|+++.++.|.++
T Consensus 249 ~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~------ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G 322 (476)
T PLN02955 249 KRKVVVTDSLFSMDGDFAPMEELSQLRKKY------GFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAG 322 (476)
T ss_pred CceEEEEeCCCCCCCCcCCHHHHHHHHHHc------CcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchh
Confidence 123444554 55789999999999999999 999999999998764321112121232 2468999999999874
Q ss_pred cCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhh
Q 011057 281 VYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEK 360 (494)
Q Consensus 281 ~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~ 360 (494)
.. .|+++.+ .... + |+......+.+....++..+.+..++++.+..+ ..+.+++.++.++|++.+
T Consensus 323 ~~--GGfi~gs-~~~~-~-------~l~~~~~~~ifStalpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~-- 387 (476)
T PLN02955 323 CH--GGFIACS-KKWK-Q-------LIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS-- 387 (476)
T ss_pred cc--CceeecH-HHHH-H-------HHHHhCCCCeecccccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc--
Confidence 32 2444443 3222 2 222222233333344444555566667666443 246678888999998842
Q ss_pred CCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 361 TGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
| +.+ ..+|+.+.+.. ......+.++|.++|+++....+|+++.+...+|++++..+|.+||+++++.|.++
T Consensus 388 -G-~~~-----~sPI~pI~ig~--~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~ 458 (476)
T PLN02955 388 -G-VDI-----SSPIISLVVGN--QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSC 458 (476)
T ss_pred -C-CCC-----CCCEEEEEeCC--HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHH
Confidence 3 542 35788887743 23466789999999999999999999888889999999999999999999999888
Q ss_pred HHHHh
Q 011057 441 LHELD 445 (494)
Q Consensus 441 ~~~l~ 445 (494)
++.+.
T Consensus 459 ~~~~~ 463 (476)
T PLN02955 459 LDFDN 463 (476)
T ss_pred Hhhhc
Confidence 66554
No 63
>PLN02721 threonine aldolase
Probab=99.95 E-value=2.3e-25 Score=222.54 Aligned_cols=328 Identities=16% Similarity=0.123 Sum_probs=212.4
Q ss_pred cccccccCCChHHHHHHHHHH-hcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHH
Q 011057 59 NLASFVTTWMEPECDKLMMAA-INKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAF 137 (494)
Q Consensus 59 ~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~ 137 (494)
+|++..++.+.+.+.+++... .+. ..+...|.. .++++.+++++|.+. ++++++|++++..++.+.
T Consensus 9 ~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~----~~l~~~la~~~~~~~-------~~~~~~Gs~a~~~~l~~~ 75 (353)
T PLN02721 9 DLRSDTVTKPTDAMRAAMANAEVDD--DVLGYDPTA----LRLEEEMAKIFGKEA-------ALFVPSGTMGNLISVLVH 75 (353)
T ss_pred hhhcccccCCCHHHHHHHHhccCCC--cccCCCHHH----HHHHHHHHHHhCCce-------eEEecCccHHHHHHHHHH
Confidence 344444445667777777653 221 112223333 345666999999864 678888899988676665
Q ss_pred HHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH---HHHHcCCeeEEEeccCCccccCHHHHHHhhh-------hCCeEEE
Q 011057 138 KRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK---FARYFEVELKEVKLSEGYYVMDPVKAVEMVD-------ENTICVA 207 (494)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~---~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-------~~t~~vv 207 (494)
... .+++|++++++|+++.+ .+...|++++.++.+++ +.+|+++++++++ +++++|+
T Consensus 76 ~~~------------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~ 142 (353)
T PLN02721 76 CDV------------RGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNED-GTMDLDAIEAAIRPKGDDHFPTTRLIC 142 (353)
T ss_pred ccC------------CCCeEEEcCccceehhcccchhhhcCceeEecCCCcC-CCcCHHHHHHHHHhccCCCCCcceEEE
Confidence 320 13689999999976665 56788999999988764 7899999999998 5788888
Q ss_pred EeeC-CCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCC
Q 011057 208 AILG-STLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYA 283 (494)
Q Consensus 208 ~~~~-~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~ 283 (494)
++.+ ++++|.+.| +++|.++|+++ |+++++|+||..+.. .......+-...++|++++++|||+.+|.
T Consensus 143 l~~~~~np~G~~~~~~~l~~l~~l~~~~------g~~livD~a~~~~~~--~~~~~~~~~~~~~~d~~~~s~sK~l~~~~ 214 (353)
T PLN02721 143 LENTHANCGGRCLSVEYTDKVGELAKRH------GLKLHIDGARIFNAS--VALGVPVHRLVKAADSVSVCLSKGLGAPV 214 (353)
T ss_pred EeccccccCCccccHHHHHHHHHHHHHc------CCEEEEEchhhhcch--hhhCCCHHHHhhhCCEEEEecccccCCce
Confidence 8774 567888755 78999999999 999999999864321 10111111113468999999999987654
Q ss_pred ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCC
Q 011057 284 GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGR 363 (494)
Q Consensus 284 g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (494)
|++++.+++.+.. +.....+..+ .......+ ..+++..+ +...+..++..++++++.+.|+++++
T Consensus 215 --G~~~~~~~~~~~~-~~~~~~~~~~---------~~~~~~~~-~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~ 279 (353)
T PLN02721 215 --GSVIVGSKSFIRK-AKRLRKTLGG---------GMRQVGVL-AAAALVAL--QENVPKLEDDHKKAKLLAEGLNQIKG 279 (353)
T ss_pred --eeEEecCHHHHHh-HHHHHHhcCC---------CeehhHHH-HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4444444433211 1111111111 11011111 11222222 11122344456778899999999977
Q ss_pred eEE-eecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 364 FNI-VSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 364 ~~~-~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
+++ +.++ ..+++.+++....+.+...++++|.++|+.+... +..++|++++..++.++++++++.|++++.
T Consensus 280 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~-------~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 280 LRVNVAAV-ETNIVYFDITDGSRITAEKLCKSLEEHGVLLMPG-------NSSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred cEEecCCc-cceEEEEEccCCccccHHHHHHHHHhCCcEEecC-------CCceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 865 4443 5678888874321246789999999999987542 235799999888999999999999988765
Q ss_pred H
Q 011057 443 E 443 (494)
Q Consensus 443 ~ 443 (494)
.
T Consensus 352 ~ 352 (353)
T PLN02721 352 T 352 (353)
T ss_pred c
Confidence 3
No 64
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.95 E-value=6.2e-25 Score=225.31 Aligned_cols=341 Identities=15% Similarity=0.078 Sum_probs=232.3
Q ss_pred CChHHHHHHHHHHhcccC--CCCC-----CChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeee---cChhHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNY--VDMD-----EYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGT---VGSSEAIMLAGLA 136 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~--~~~~-----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t---~ggt~a~~~a~~a 136 (494)
..+|.+.+++...+.+.+ ++++ .......+|+.+++.+++++|.+++ ...++ ++|++||..++.+
T Consensus 45 ~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~-----~~~~~~~~~sgt~an~~v~~a 119 (452)
T PTZ00094 45 FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPE-----EWGVNVQPYSGSPANFAVYTA 119 (452)
T ss_pred cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcc-----cceeecCCCchHHHHHHHHHH
Confidence 346888888888776543 2221 1224566776788999999999752 13344 7899999988877
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHH----------cCCeeEEEeccCCccccCHHHHHHhhhh-CCeE
Q 011057 137 FKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARY----------FEVELKEVKLSEGYYVMDPVKAVEMVDE-NTIC 205 (494)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~----------~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~ 205 (494)
+..+ +++|+++...|.+....+.. .++++..++++.+ +.+|+++|++++.+ ++++
T Consensus 120 l~~~-------------gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~-g~id~~~L~~~l~~~~~~l 185 (452)
T PTZ00094 120 LLQP-------------HDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEK-GLIDYDKLEELAKAFRPKL 185 (452)
T ss_pred hcCC-------------CCEEEecccccCCcccccccccccccccceeeeeeeecccCCC-CCcCHHHHHHHHHHhCCCE
Confidence 7321 26899988888765433211 1233445556654 78999999999965 5666
Q ss_pred EEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCce
Q 011057 206 VAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGI 285 (494)
Q Consensus 206 vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 285 (494)
|+++ ++.+|...|+++|+++|+++ |++++||++|+.|..+... ... ...++|++++++|||+++|.|
T Consensus 186 vi~~--~s~~g~~~di~~I~~i~~~~------ga~l~vDaaq~~G~i~~~~--~~~--~~~~~D~l~~S~hK~l~GP~G- 252 (452)
T PTZ00094 186 IIAG--ASAYPRDIDYKRFREICDSV------GAYLMADIAHTSGLVAAGV--LPS--PFPYADVVTTTTHKSLRGPRS- 252 (452)
T ss_pred EEEe--CCCCCCccCHHHHHHHHHHc------CCEEEEeccchhccccCCC--CCC--CCCCCcEEEcCCccCCCCCCc-
Confidence 5543 44689999999999999999 9999999999988654311 111 123799999999999999998
Q ss_pred EEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE
Q 011057 286 GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN 365 (494)
Q Consensus 286 G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (494)
|++++++. .. ..+... .... ....+.|+.+...++++.++++.+...+++++.++..+++++|.+.|++. +++
T Consensus 253 g~l~~~~~-~~-~~l~~~---~~~~-~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~ 325 (452)
T PTZ00094 253 GLIFYRKK-VK-PDIENK---INEA-VFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYD 325 (452)
T ss_pred eEEEEecc-cc-hHHHHh---hccc-cCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcE
Confidence 77777653 21 111000 0000 00012355556678888899988876777888899999999999999887 488
Q ss_pred EeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCC--CCCceEEEEEeccCCC----hHHHHHHHHHHHH
Q 011057 366 IVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPAD--AQHITVLRVVIREDFS----RTLAERLVLDITK 439 (494)
Q Consensus 366 ~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~--~~~~~~lRvs~~~~~t----~~~id~~i~~l~~ 439 (494)
+..+.....++.+.+. ..+.+...+...|.++||.+.....|.. ......+|++++..+| ++|++++++.|++
T Consensus 326 v~~~~~~~~~~~v~~~-~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~ 404 (452)
T PTZ00094 326 LVTGGTDNHLVLVDLR-PFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDR 404 (452)
T ss_pred EecCCCCCceEeecCC-cCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHH
Confidence 8753211233333332 2346778899999889999853322321 1123579999977665 8999999999999
Q ss_pred HHHHHhcC
Q 011057 440 VLHELDSL 447 (494)
Q Consensus 440 ~~~~l~~~ 447 (494)
++......
T Consensus 405 ~~~~~~~~ 412 (452)
T PTZ00094 405 AVKLAQEI 412 (452)
T ss_pred HHHHHhhh
Confidence 98875443
No 65
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.94 E-value=4.9e-25 Score=223.79 Aligned_cols=329 Identities=15% Similarity=0.060 Sum_probs=224.2
Q ss_pred CChHHHHHHHHHHhcccCCCCCCCh---hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDEYP---VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQN 143 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~ 143 (494)
..+|.+.+++.++++....+...++ +......++++.+++++|.+. .+++++|++||..++..+...
T Consensus 59 ~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~-------~l~~~sG~~an~~ai~~l~~~--- 128 (402)
T TIGR01821 59 GQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKES-------ALVFTSGYVANDATLATLAKI--- 128 (402)
T ss_pred CCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCe-------EEEECchHHHHHHHHHHhhCC---
Confidence 4478999999988877544332222 334556678888999999753 677888899999887766421
Q ss_pred HHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhh---h-CCeEEEEeeCCCCccccc
Q 011057 144 KRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVD---E-NTICVAAILGSTLNGEFE 219 (494)
Q Consensus 144 ~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~---~-~t~~vv~~~~~~~tG~~~ 219 (494)
..+..|+.+...|.++...+...|+++..++. .|++++++.++ + ++++|++.++++++|.+.
T Consensus 129 --------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~ 194 (402)
T TIGR01821 129 --------IPGCVIFSDELNHASMIEGIRHSGAEKFIFRH------NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIA 194 (402)
T ss_pred --------CCCCEEEEcchHhHHHHHHHHHcCCeEEEECC------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc
Confidence 01245666777899998888888988766652 36677777665 2 578899999999999999
Q ss_pred CHHHHHHHHHHhhcccCCCceEEEecccccccc-cccCCccccccc-CCCceEEEEcCcccCCcCCceEEEEEeCCCCcc
Q 011057 220 DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIA-PFLYPELEWDFR-LPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP 297 (494)
Q Consensus 220 ~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~~~~~~-~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~ 297 (494)
|+++|.++|+++ ++++++|+||+.+.. +...... ...+ ...+|.+..++.|.+..+ | |+++.+ +...
T Consensus 195 ~l~~i~~l~~~~------~~~livDea~~~G~~g~~g~g~~-~~~~~~~~~div~~t~sKa~g~~-G-G~i~~~-~~~~- 263 (402)
T TIGR01821 195 PIEEICDLADKY------GALTYLDEVHAVGLYGPRGGGIA-ERDGLMHRIDIIEGTLAKAFGVV-G-GYIAAS-RKLI- 263 (402)
T ss_pred CHHHHHHHHHHc------CCEEEEeCcccccccCCCCCccc-hhccCCCCCeEEEEechhhhccC-C-ceeecC-HHHH-
Confidence 999999999999 999999999985432 2111101 1111 134688888899998543 3 555433 2222
Q ss_pred cccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEE
Q 011057 298 EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVA 377 (494)
Q Consensus 298 ~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~ 377 (494)
+.+... ...+.+.++.++....+..++++.+... ....++..++++++.+.|++++ ++++.+ ..+++.
T Consensus 264 ~~l~~~-------~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~i~~ 331 (402)
T TIGR01821 264 DAIRSY-------APGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALG-IPVIPN--PSHIVP 331 (402)
T ss_pred HHHHHh-------CcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcC-CCcCCC--CCCEEE
Confidence 211110 0011122333344455566677665443 3455666789999999999985 776544 457777
Q ss_pred EEecCCCCCCHHHHHHHHHh-cCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 378 FSLKDNKRHDEFEVAELLRR-FGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 378 f~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
+.+.. .....++.++|.+ +|++++....|+...+..++|++++..+|++|++++++.|+++++++
T Consensus 332 i~~~~--~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 332 VIIGD--AALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred EEeCC--HHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 76532 1135678898875 59998776666655566789999999999999999999999988764
No 66
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=9.6e-25 Score=217.72 Aligned_cols=325 Identities=16% Similarity=0.075 Sum_probs=221.7
Q ss_pred CChHHHHHHHHHHhcccCCCCCC---ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDE---YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQN 143 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~ 143 (494)
..+|++.+++.+++.+...++.. ..+.....+++++.+++++|.+. .+++++|++++..++.++..+
T Consensus 15 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-------~iv~~sg~~a~~~~~~~~~~~--- 84 (349)
T cd06454 15 ANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEA-------ALVFSSGYAANDGVLSTLAGK--- 84 (349)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCC-------EEEeccHHHHHHHHHHHhcCC---
Confidence 44688999999988753222222 12456677788889999999863 567778888988776655321
Q ss_pred HHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh-----CCeEEEEeeCCCCcccc
Q 011057 144 KRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE-----NTICVAAILGSTLNGEF 218 (494)
Q Consensus 144 ~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-----~t~~vv~~~~~~~tG~~ 218 (494)
+++|+++++.|+++...++..|++++.++ .+|.+.+++++.+ ++++|+++++++++|.+
T Consensus 85 ----------gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~ 148 (349)
T cd06454 85 ----------GDLIISDSLNHASIIDGIRLSGAKKRIFK------HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDI 148 (349)
T ss_pred ----------CCEEEEehhhhHHHHHHHHHcCCceEEec------CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCc
Confidence 25799999999999988899999988775 2577888888864 46778888899999999
Q ss_pred cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcc-cccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcc
Q 011057 219 EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPEL-EWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP 297 (494)
Q Consensus 219 ~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~ 297 (494)
.|+++|+++|+++ ++++++|++|+.+..+...... ..+....+.|++..++||++.. .| |+++.+ +..+.
T Consensus 149 ~~~~~i~~~~~~~------~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~g-G~i~~~-~~~~~ 219 (349)
T cd06454 149 APLPELVDLAKKY------GAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-VG-GYIAGS-KELID 219 (349)
T ss_pred cCHHHHHHHHHHc------CCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-cC-CEEECC-HHHHH
Confidence 9999999999999 9999999999855332111000 1112234689999999999865 34 666543 32221
Q ss_pred cccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEE
Q 011057 298 EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVA 377 (494)
Q Consensus 298 ~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~ 377 (494)
........+ ...++.+....+++.++++.+.. +....++..++++++.+.|.+++ +++..++ ...+++
T Consensus 220 ~~~~~~~~~--------~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~-~~~~~~ 287 (349)
T cd06454 220 YLRSYARGF--------IFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELG-FPVGGSP-SHIIPP 287 (349)
T ss_pred HHHHhchhh--------hccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcC-CcccCCC-CCcEEE
Confidence 111111111 11123334445566667766543 35677888899999999999885 7766553 333444
Q ss_pred EEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 378 FSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 378 f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
+.... ..+..++++.|.++|+.+.....+....+..++|++++.+++.++++++++.|+++
T Consensus 288 ~~~~~--~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 288 LIGDD--PAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EeCCC--hHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 44321 23567899999999998864332222223468999999889999999888888754
No 67
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.7e-24 Score=217.17 Aligned_cols=341 Identities=14% Similarity=0.038 Sum_probs=231.9
Q ss_pred CcccccccCC-ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHH
Q 011057 58 LNLASFVTTW-MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLA 136 (494)
Q Consensus 58 ~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a 136 (494)
++|..+.++. +++.+.+++.+++......|...++..++++.+.+++.+.+|...+ ...+++|+|+++++.+++.+
T Consensus 27 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~---~~~i~~t~g~~~al~~~~~~ 103 (382)
T PRK06108 27 LPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATP---PERIAVTSSGVQALMLAAQA 103 (382)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcC---cceEEEeCChHHHHHHHHHH
Confidence 4555555444 3567888888877664445666678889999999999998884331 13588999999999887776
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC--CccccCHHHHHHhhhhCCeEEEEeeCCCC
Q 011057 137 FKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE--GYYVMDPVKAVEMVDENTICVAAILGSTL 214 (494)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~--~~~~~d~~~L~~~i~~~t~~vv~~~~~~~ 214 (494)
+... ++.|+++.++|..+...++..|++++.++++. +++.+|+++|++.+++++++|++++++||
T Consensus 104 l~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NP 170 (382)
T PRK06108 104 LVGP-------------GDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNP 170 (382)
T ss_pred hcCC-------------CCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCC
Confidence 6321 25799999999999999999999999999973 34679999999999888999999999999
Q ss_pred ccccc---CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc--ccc-cCCCceEEEEcCcccC-CcCCceEE
Q 011057 215 NGEFE---DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE--WDF-RLPLVKSINVSGHKYG-LVYAGIGW 287 (494)
Q Consensus 215 tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~~~~~D~~~~~~hK~l-~~p~g~G~ 287 (494)
||.+. ++++|.++|+++ ++++++|++|+.+.... ..... .++ ....-.++..+++|.+ +++.++|+
T Consensus 171 tG~~~~~~~~~~l~~~~~~~------~~~li~De~y~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~ 243 (382)
T PRK06108 171 TGWTASRDDLRAILAHCRRH------GLWIVADEVYERLYYAP-GGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGW 243 (382)
T ss_pred CCcccCHHHHHHHHHHHHHC------CcEEEEehhhhhhccCC-CCCCCCHhhcCCCcCCEEEEeechhhccCcccceee
Confidence 99875 468899999999 99999999998764310 00100 111 1112346677889965 56778999
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh--cHhHHHHHHHHHHHHHHHHHHHHhhCCCeE
Q 011057 288 VIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL--GFEGYRNVMENCHENAMVLKEGLEKTGRFN 365 (494)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l--~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (494)
+++..+ .+ ..+.....+.. . ..+.+.+.++...+ +.+.+++..+++.++++++.+.|+++++++
T Consensus 244 ~~~~~~-~~-~~~~~~~~~~~---------~---~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 309 (382)
T PRK06108 244 LVAPPA-LG-QVLEKLIEYNT---------S---CVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVE 309 (382)
T ss_pred eeCCHH-HH-HHHHHHHHhcc---------c---CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 987432 22 21111111110 0 11222333444333 334467778888889999999999887787
Q ss_pred EeecCCCccEEEEEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 366 IVSKDEGVPLVAFSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 366 ~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
+..+. ...++.+.+++ ..+..+++++|. ++|+.+....... ..+..++|++++. +.++++..++.|++++
T Consensus 310 ~~~p~-~g~~~~~~l~~--~~~~~~~~~~ll~~~gV~v~pg~~f~-~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 310 VAKPD-GAMYAFFRIPG--VTDSLALAKRLVDEAGLGLAPGTAFG-PGGEGFLRWCFAR--DPARLDEAVERLRRFL 380 (382)
T ss_pred ccCCC-eeEEEEEeCCC--CCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 66542 33344556643 246778999875 5799874322111 1235689999986 6777776666666554
No 68
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.94 E-value=2.6e-24 Score=215.78 Aligned_cols=295 Identities=12% Similarity=-0.011 Sum_probs=197.8
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHH
Q 011057 92 VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFA 171 (494)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~ 171 (494)
+..++.+++++.+|+++|.+. .++.++|+.++...+..... .++.|+++...|.++...+
T Consensus 53 g~~~~~~~~e~~la~~~~~~~-------~l~~~sG~~a~~~~~~~~~~-------------~~d~ii~d~~~H~sv~~~~ 112 (370)
T PRK05937 53 GPSSLLDDLEHKIAHFHGAPE-------AFIVPSGYMANLGLCAHLSS-------------VTDYVLWDEQVHISVVYSL 112 (370)
T ss_pred CChHHHHHHHHHHHHHhCCCe-------EEEECChHHHHHHHHHHhCC-------------CCCEEEEEhhhhHHHHHHH
Confidence 466778889999999999964 46666677777532222111 1257788899999999988
Q ss_pred HHcCCeeEEEeccCCccccCHHHHHHhhhh------CCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 011057 172 RYFEVELKEVKLSEGYYVMDPVKAVEMVDE------NTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDA 245 (494)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (494)
+........++ ..|+++|++++++ .+.+|+++++++++|.+.|+++|.++|+++ ++++|||+
T Consensus 113 ~~~~~~~~~~~------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~------~~~livDe 180 (370)
T PRK05937 113 SVISGWHQSFR------HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKY------HAHLIVDE 180 (370)
T ss_pred HHcCCceEEec------CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHc------CCEEEEEC
Confidence 87653333332 4789999998873 356777889999999999999999999999 99999999
Q ss_pred ccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHH
Q 011057 246 ASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQV 325 (494)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~ 325 (494)
||+.|..+.........++....+.+..+++|.+ +|.|+|+++.++ ...........|. +.++.+...+
T Consensus 181 a~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~vl~~~~--~~~~~~~~~~~~~--------~s~~~~~~~~ 249 (370)
T PRK05937 181 AHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAALLSSSE--VKQDLMLNSPPLR--------YSTGLPPHLL 249 (370)
T ss_pred CccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEEEcCHH--HHHHHHHhCCCCe--------ecCCCCHHHH
Confidence 9997654332111111122223344556777976 567877665322 1111000011111 2233344556
Q ss_pred HHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeecc
Q 011057 326 IAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAY 405 (494)
Q Consensus 326 ~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~ 405 (494)
+++.++++.+..++ +...+++.++++++.+.|...+ . ...+.+.+++ .+...+.+.|.++|+.++..
T Consensus 250 ~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~------~---~~~~~i~~~~---~~~~~~~~~L~~~gi~v~~~ 316 (370)
T PRK05937 250 ISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAA------P---GCVQPIFLPG---ISEQELYSKLVETGIRVGVV 316 (370)
T ss_pred HHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCC------C---CCEEEEEeCC---hhHHHHHHHHHHCCeeEEee
Confidence 77778888776655 4566788889999998886432 0 1123344432 24678999999999988654
Q ss_pred ccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 406 TMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 406 ~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
..|. ...+|++++.++|++|+|++++.|+++++++.+
T Consensus 317 ~~~~----~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~ 353 (370)
T PRK05937 317 CFPT----GPFLRVNLHAFNTEDEVDILVSVLATYLEKYQK 353 (370)
T ss_pred CCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 4442 236999999999999999999999998876544
No 69
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=4.8e-24 Score=213.62 Aligned_cols=371 Identities=14% Similarity=0.090 Sum_probs=245.5
Q ss_pred HHHHHHHHHhhhhcCCCCCcccccccCCChHHHHHHHHHHhcccC-----C--CCCCChhhHHHHHHHHHHHHHHhCCCC
Q 011057 40 EAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNY-----V--DMDEYPVTTELQNRCVNIIARLFNAPL 112 (494)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-----~--~~~~~~~~~~le~~~~~~la~l~g~~~ 112 (494)
.++.+.+++..... ...++|-.-. ...+|.+.+++...+.+-+ + .|.......++|..+.+...++||.+.
T Consensus 35 ~~~~~~~~~e~~rq-~~~l~LiasE-N~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~ 112 (493)
T PRK13580 35 PRIAEAIRQELADQ-RSSLKLIASE-NYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEH 112 (493)
T ss_pred HHHHHHHHHHHHHH-hcCceEeccc-ccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCc
Confidence 35555555554432 1223222211 1335777777665554311 1 133345778899999999999999975
Q ss_pred CCCCCcceeeecChhHHHHHHHHHHHHH----------------------HHHHHHhcCCCCCCCeEEeC---CCcchHH
Q 011057 113 EDSETAVGVGTVGSSEAIMLAGLAFKRK----------------------WQNKRKAEGKPFDKPNIVTG---ANVQVCW 167 (494)
Q Consensus 113 ~~~~~~~~~~t~ggt~a~~~a~~a~~~~----------------------~~~~~~~~g~~~~~~~vi~~---~~~h~s~ 167 (494)
..+-..+|+.||+.++.++..+ |.+.|+.. .++.|+.- .-.|.+.
T Consensus 113 ------anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~----~gd~i~~l~l~~GGHlth 182 (493)
T PRK13580 113 ------AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAEL----GNQRLLGMSLDSGGHLTH 182 (493)
T ss_pred ------ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccC----CCCEEEeecCCCCCeeec
Confidence 2455678899999888887642 22222111 12455532 2234332
Q ss_pred HHHHHHcC--CeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 011057 168 EKFARYFE--VELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDA 245 (494)
Q Consensus 168 ~~~~~~~G--~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (494)
.......| ..++..+++++++.+|++++++.+.++++.|++++.++..+ ..|+++|.++|+++ |++++||+
T Consensus 183 g~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~dl~~i~eia~~~------gA~L~VD~ 255 (493)
T PRK13580 183 GFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPR-RVNFAKLREIADEV------GAVLMVDM 255 (493)
T ss_pred CcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCC-CcCHHHHHHHHHHc------CCEEEEEC
Confidence 22223334 45666777765678999999999999999999998888844 77999999999999 99999999
Q ss_pred ccccccccccCCcccccc-cCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHH
Q 011057 246 ASGGFIAPFLYPELEWDF-RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQ 324 (494)
Q Consensus 246 a~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~ 324 (494)
||+.|.++. .....+. ...++|++++++||++++|.| |++++++. .. +.+....+|+ + ++.....
T Consensus 256 AH~~Gligg--~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~-l~-~~L~~a~P~i--------~-gg~l~p~ 321 (493)
T PRK13580 256 AHFAGLVAG--KVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKE-YA-DAVDKGCPLV--------L-GGPLPHV 321 (493)
T ss_pred chhhceecc--ccchhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHH-HH-HHHhhCCCcc--------c-CCCccHH
Confidence 999876531 1111111 134799999999999988875 77776543 21 2111111122 1 2222334
Q ss_pred HHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeec
Q 011057 325 VIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPA 404 (494)
Q Consensus 325 ~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~ 404 (494)
+++...++..+....++++.++..+++++|++.|.+.| |.++......+++.+.+.+. +.....+.+.|.+.||++..
T Consensus 322 iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G-~~vv~ggTdshIV~V~lg~~-~~~g~~a~~~L~e~GI~vn~ 399 (493)
T PRK13580 322 MAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRG-ARLVTGGTDNHLVLIDVTSF-GLTGRQAESALLDAGIVTNR 399 (493)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcC-CCccCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHCCeEEcc
Confidence 55555556555444557789999999999999999987 88764322468888888542 22344677899999999988
Q ss_pred cccCCCCCC---ceEEEEEecc----CCChHHHHHHHHHHHHHHHHHh
Q 011057 405 YTMPADAQH---ITVLRVVIRE----DFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 405 ~~~~~~~~~---~~~lRvs~~~----~~t~~~id~~i~~l~~~~~~l~ 445 (494)
...|++..+ ...+|++++. .++.+|++++.+.|.++++...
T Consensus 400 i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~~ 447 (493)
T PRK13580 400 NSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNTT 447 (493)
T ss_pred ccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhhh
Confidence 888887766 6789999887 5568999999999988887553
No 70
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.94 E-value=6.9e-24 Score=215.46 Aligned_cols=329 Identities=13% Similarity=0.043 Sum_probs=224.0
Q ss_pred CChHHHHHHHHHHhcccCCCCCCCh---hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDEYP---VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQN 143 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~ 143 (494)
..+|++.+++.++++....+.+.++ +......++++.|++++|.+. .+++++|++||..++..+...
T Consensus 59 ~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~-------~~~~~SG~~An~~ai~~l~~~--- 128 (406)
T PRK13393 59 GQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEA-------ALLFTSGYVSNWAALSTLGSR--- 128 (406)
T ss_pred CCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCc-------EEEeCCcHHHHHHHHHHhhcC---
Confidence 3478899999988876443322222 334466778888999999754 677778888998887755321
Q ss_pred HHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhh----hCCeEEEEeeCCCCccccc
Q 011057 144 KRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVD----ENTICVAAILGSTLNGEFE 219 (494)
Q Consensus 144 ~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~t~~vv~~~~~~~tG~~~ 219 (494)
..++.|+.+...|.++...++..|.+++.++. .|++++++.+. +++++|++.++++++|.+.
T Consensus 129 --------~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~ 194 (406)
T PRK13393 129 --------LPGCVILSDELNHASMIEGIRHSRAEKRIFRH------NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIA 194 (406)
T ss_pred --------CCCCEEEEccchhHHHHHHHHHcCCeEEEeCC------CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchh
Confidence 01246777888999999988888888777763 36666766664 2567888899999999999
Q ss_pred CHHHHHHHHHHhhcccCCCceEEEecccccccc-cccCCccccccc-CCCceEEEEcCcccCCcCCceEEEEEeCCCCcc
Q 011057 220 DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIA-PFLYPELEWDFR-LPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP 297 (494)
Q Consensus 220 ~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~~~~~~-~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~ 297 (494)
|+++|.++|+++ ++++++|++|+.+.. +.... .....+ ...+|.+..++.|.+..+ | |+++. ++...
T Consensus 195 ~l~~i~~l~~~~------~~~livDea~~~g~~g~~G~g-~~~~~~~~~~~~i~~~tlsKa~g~~-G-G~~~~-~~~~~- 263 (406)
T PRK13393 195 PIAEICDVAEKH------GAMTYLDEVHAVGLYGPRGGG-IAEREGLADRLTIIEGTLAKAFGVM-G-GYITG-SAALC- 263 (406)
T ss_pred CHHHHHHHHHHc------CCEEEEECCccccccCCCCCc-hhhhcCCCCCCeEEEEeCchhhccc-C-ceeeC-CHHHH-
Confidence 999999999999 999999999985442 21111 100111 134688877888987543 3 55543 32222
Q ss_pred cccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEE
Q 011057 298 EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVA 377 (494)
Q Consensus 298 ~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~ 377 (494)
..+.. ....+.+.++.++....+..++++.+...+ ...++..++++++.+.|++++ ++++.+ ..+++.
T Consensus 264 ~~l~~-------~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~i~~ 331 (406)
T PRK13393 264 DFIRS-------FASGFIFTTSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKAG-IPHLPN--PSHIVP 331 (406)
T ss_pred HHHHH-------hCcCceecCccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHcC-CCcCCC--CCCeEE
Confidence 11111 011111223344444566667777665443 223566788999999999875 766533 456777
Q ss_pred EEecCCCCCCHHHHHHHHHh-cCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 378 FSLKDNKRHDEFEVAELLRR-FGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 378 f~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
+.+.. ..+..++.++|.+ +|++++....|+...+...+|++++..+|.+|+|++++.|+++++.+
T Consensus 332 v~~~~--~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 332 VMVGD--PVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred EEeCC--HHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 76532 1245689999987 59999877666655566789999999999999999999999987664
No 71
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.93 E-value=6.7e-24 Score=215.91 Aligned_cols=330 Identities=14% Similarity=0.078 Sum_probs=223.4
Q ss_pred cCCChHHHHHHHHHHhcccCCCCCCCh---hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINKNYVDMDEYP---VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKW 141 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~ 141 (494)
...++|.+.+++.++++........++ +......++++.|++++|.+. .+++++|++||..++..+...
T Consensus 58 gl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~-------~~~~~sG~~an~~ai~~l~~~- 129 (407)
T PRK09064 58 GMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEA-------ALVFTSGYVSNDATLSTLAKL- 129 (407)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCc-------EEEECcHHHHHHHHHHHHhCC-
Confidence 335578899999888776433222221 335566678888999999653 667777888988777765321
Q ss_pred HHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhh----hCCeEEEEeeCCCCccc
Q 011057 142 QNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVD----ENTICVAAILGSTLNGE 217 (494)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~t~~vv~~~~~~~tG~ 217 (494)
..+..|+.+...|.+....++..|+++..++. .|+++|++.++ +++++|+++.+++++|.
T Consensus 130 ----------~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~ 193 (407)
T PRK09064 130 ----------IPDCVIFSDELNHASMIEGIRRSRCEKHIFRH------NDVAHLEELLAAADPDRPKLIAFESVYSMDGD 193 (407)
T ss_pred ----------CCCCEEEEeCcchHHHHHHHHHcCCcEEEECC------CCHHHHHHHHHhccCCCCeEEEEeCCCCCCcc
Confidence 01235566777899888888888888766653 36677777775 45789999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEeccccccc-ccccCCcccccccC-CCceEEEEcCcccCCcCCceEEEEEeCCCC
Q 011057 218 FEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFI-APFLYPELEWDFRL-PLVKSINVSGHKYGLVYAGIGWVIWRNKED 295 (494)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~-~~~~~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~ 295 (494)
+.|+++|.++|+++ +++++||+||+.+. .+.... .....+. ..+|++..+++|.+.. .| |+++.+ +..
T Consensus 194 ~~~l~~i~~l~~~~------~~~livDEa~~~G~~g~~g~g-~~~~~~~~~~~div~~t~sKa~g~-~G-G~~~~~-~~~ 263 (407)
T PRK09064 194 IAPIAEICDLADKY------NALTYLDEVHAVGMYGPRGGG-IAERDGLMDRIDIIEGTLAKAFGV-MG-GYIAGS-AAL 263 (407)
T ss_pred ccCHHHHHHHHHHc------CCEEEEECCCcccccCCCCCC-hHHhcCCCCCCeEEEEecchhhhc-cC-ceEecC-HHH
Confidence 99999999999999 99999999998443 111111 1101121 3468888899998743 33 665543 222
Q ss_pred ccccccc-ccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCcc
Q 011057 296 LPEELIF-HINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVP 374 (494)
Q Consensus 296 ~~~~~~~-~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 374 (494)
+ +.+.. ...| .+..+.+.....+..++++.+... ....+++.++++++.+.|++++ ++++.+ ..+
T Consensus 264 ~-~~l~~~~~~~--------~~t~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~ 329 (407)
T PRK09064 264 V-DAVRSYAPGF--------IFTTSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAAG-IPVMPN--ESH 329 (407)
T ss_pred H-HHHHHhCccc--------cccCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCCC--CCC
Confidence 2 11111 1111 111223334445566667666544 2346778899999999999986 776643 457
Q ss_pred EEEEEecCCCCCCHHHHHHHHHh-cCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 375 LVAFSLKDNKRHDEFEVAELLRR-FGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
++.+.+.. .....++.++|.+ +|++++....|+...+..++|++++..+|.+|++++++.|+++++.+
T Consensus 330 iv~i~~~~--~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 330 IVPVMVGD--PEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred EEEEEeCC--HHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 77777632 1245689998875 59999776666554456789999999999999999999999987654
No 72
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=7.7e-24 Score=215.49 Aligned_cols=332 Identities=12% Similarity=0.038 Sum_probs=218.3
Q ss_pred cCCChHHHHHHHHHHhcccCCCCCCC---hhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINKNYVDMDEY---PVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKW 141 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~ 141 (494)
+..++|.+.+++.++++....+...+ .+......++++.+++++|.+. .+++++|++|+..++..+...
T Consensus 58 ~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~-------~i~~~sG~~a~~~~i~~l~~~- 129 (410)
T PRK13392 58 GMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKES-------ALLFTSGYVSNDAALSTLGKL- 129 (410)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCC-------EEEECcHHHHHHHHHHHHhcC-
Confidence 33457889999988876543322111 1233345577888999999753 566666788888776654220
Q ss_pred HHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhh----hCCeEEEEeeCCCCccc
Q 011057 142 QNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVD----ENTICVAAILGSTLNGE 217 (494)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~t~~vv~~~~~~~tG~ 217 (494)
. .++.|+++...|.++...++..|++++.++.+ |.+.+++.+. +++++|++++++|++|.
T Consensus 130 ---------~-~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~ 193 (410)
T PRK13392 130 ---------L-PGCVILSDALNHASMIEGIRRSGAEKQVFRHN------DLADLEEQLASVDPDRPKLIAFESVYSMDGD 193 (410)
T ss_pred ---------C-CCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC------CHHHHHHHHHhccCCCCEEEEEeCCCCCCcc
Confidence 0 12577888889999988888899988777532 3344444443 46889999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc-CCCceEEEEcCcccCCcCCceEEEEEeCCCCc
Q 011057 218 FEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGLVYAGIGWVIWRNKEDL 296 (494)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~ 296 (494)
+.|+++|.++|+++ ++++++|+||+.+.............. ...+|.++.+++|++..+ | |+++. ++...
T Consensus 194 ~~~l~~i~~l~~~~------~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~-G-G~~~~-~~~~~ 264 (410)
T PRK13392 194 IAPIEAICDLADRY------NALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL-G-GYIAA-SADLI 264 (410)
T ss_pred cccHHHHHHHHHHc------CCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc-c-chhhc-CHHHH
Confidence 99999999999999 999999999985432100011100111 235788888999987554 3 55543 33222
Q ss_pred ccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEE
Q 011057 297 PEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLV 376 (494)
Q Consensus 297 ~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v 376 (494)
.........| .+..+.++....++.++|+.+... ....+++.++++++.+.|++++ +++..+ ..+++
T Consensus 265 ~~l~~~~~~~--------~~s~~~~~~~~~a~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~~~ 331 (410)
T PRK13392 265 DFVRSFAPGF--------IFTTALPPAVAAGATAAIRHLKTS--QTERDAHQDRVAALKAKLNANG-IPVMPS--PSHIV 331 (410)
T ss_pred HHHHHhCcch--------hccCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCCC--CCCEE
Confidence 1111111111 111222233445555666655433 2445677888999999999985 776533 45676
Q ss_pred EEEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 377 AFSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 377 ~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
.+.+.. ..+..+++++|. ++||.+.....|....+..++|++++..+|.+|++++++.|+++++++
T Consensus 332 ~i~~~~--~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 332 PVMVGD--PTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred EEEeCC--HHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 665532 123568999886 679998776666554566789999999999999999999999887654
No 73
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.93 E-value=9.7e-24 Score=214.29 Aligned_cols=342 Identities=18% Similarity=0.098 Sum_probs=228.2
Q ss_pred cCCCCCcccccc-cCC-ChHHHHHHHHHHhcccCCCCC---CChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 53 DGNPRLNLASFV-TTW-MEPECDKLMMAAINKNYVDMD---EYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 53 ~~~~~~~~~~~~-~~~-~~p~~~~~~~~~~~~~~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
+|+..++|.+.. +.. ++|.+.+++.+++..+...+. ...+..++.+++++++++++|.+. .+++|+ |+
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~~------~i~~ts-G~ 112 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTED------AILYSS-CF 112 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCCc------EEEEcC-hH
Confidence 455666666543 233 467788888888765432222 234677888999999999999753 244454 58
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh------
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE------ 201 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------ 201 (494)
+++..++.++.+ .+++|++++++|+++...++..|++++.++. +|++++++.+++
T Consensus 113 ~a~~~~~~~l~~-------------~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~i~~~~~~~~ 173 (397)
T PRK06939 113 DANGGLFETLLG-------------KEDAIISDALNHASIIDGVRLCKAKRYRYAN------NDMADLEAQLKEAKEAGA 173 (397)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEEhhhhHHHHHHHHhcCCceEEeCC------CCHHHHHHHHHhhhccCC
Confidence 888876655422 1368999999999999999999988877653 578888888764
Q ss_pred CCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc-CCCceEEEEcCcccCC
Q 011057 202 NTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGL 280 (494)
Q Consensus 202 ~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~hK~l~ 280 (494)
++++|+.....+++|.+.++++|.++|+++ ++++++|++|+.+..+........... ..++|+++.+++|++.
T Consensus 174 ~~~~v~~~~v~~~~G~~~~~~~l~~la~~~------~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 247 (397)
T PRK06939 174 RHKLIATDGVFSMDGDIAPLPEICDLADKY------DALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG 247 (397)
T ss_pred CCeEEEEecCcCCCCCcCCHHHHHHHHHHh------CCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC
Confidence 566777666788999999999999999999 999999999964322111000000111 1357899999999996
Q ss_pred cCCceEEEEEeCCCCccccccc-ccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHh
Q 011057 281 VYAGIGWVIWRNKEDLPEELIF-HINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLE 359 (494)
Q Consensus 281 ~p~g~G~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~ 359 (494)
++ ..|+++.+. ..+ +.+.. ...+. +.++.......++.++++.+.. ..+..++..++++++.+.|+
T Consensus 248 g~-r~G~v~~~~-~~~-~~l~~~~~~~~--------~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~ 314 (397)
T PRK06939 248 GA-SGGYTAGRK-EVI-DWLRQRSRPYL--------FSNSLAPAIVAASIKVLELLEE--SDELRDRLWENARYFREGMT 314 (397)
T ss_pred cc-CceEEEeCH-HHH-HHHHHhCcccc--------ccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 54 568887643 232 22211 11111 1122222333445555655532 24667788899999999999
Q ss_pred hCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHH
Q 011057 360 KTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITK 439 (494)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~ 439 (494)
+++ +++..+ ..+++.+.+.. ..+..+++++|.++|+.+....++....+..++|++++..++.++++++++.|++
T Consensus 315 ~~~-~~~~~~--~~~~~~~~~~~--~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~ 389 (397)
T PRK06939 315 AAG-FTLGPG--EHPIIPVMLGD--AKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEK 389 (397)
T ss_pred HcC-CCcCCC--CCCEEEEEECC--HHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 885 665432 34565555432 2356789999999999876543332223446899999888899999999999988
Q ss_pred HHHHH
Q 011057 440 VLHEL 444 (494)
Q Consensus 440 ~~~~l 444 (494)
+++.+
T Consensus 390 ~~~~~ 394 (397)
T PRK06939 390 VGKEL 394 (397)
T ss_pred HHHHh
Confidence 87654
No 74
>PLN00175 aminotransferase family protein; Provisional
Probab=99.93 E-value=2.6e-23 Score=211.16 Aligned_cols=344 Identities=14% Similarity=0.083 Sum_probs=232.0
Q ss_pred CCCCcccccccCCC-hHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHH
Q 011057 55 NPRLNLASFVTTWM-EPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLA 133 (494)
Q Consensus 55 ~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a 133 (494)
++.++|..+.+..+ ++.+.+++.+++......|....+..++++.+.+++.+.+|.+.+. ...+++|+|+++|+.++
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~--~~~I~vt~G~~~al~~~ 131 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDP--EKEVTVTSGCTEAIAAT 131 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCCEEEeCCHHHHHHHH
Confidence 34566777666644 4568888888876544456666688899999999999888875421 12488899999999887
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCC
Q 011057 134 GLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGST 213 (494)
Q Consensus 134 ~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~ 213 (494)
+.+.... +++|+++++.|..+...++..|++++.++++++++.+|+++|++++.+++++|++++++|
T Consensus 132 ~~~l~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~N 198 (413)
T PLN00175 132 ILGLINP-------------GDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHN 198 (413)
T ss_pred HHHhCCC-------------CCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCC
Confidence 7766321 368999999999999999999999999999754478999999999988899999999999
Q ss_pred Cccccc---CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc-ccc-cCCCceEEEEcCcccCC-cCCceEE
Q 011057 214 LNGEFE---DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE-WDF-RLPLVKSINVSGHKYGL-VYAGIGW 287 (494)
Q Consensus 214 ~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-~~~~~D~~~~~~hK~l~-~p~g~G~ 287 (494)
|||.+. .+++|+++|+++ ++++++|++|..+.. ..+... ..+ +.....++..++.|.+. ++.++||
T Consensus 199 PtG~~~s~~~l~~l~~~a~~~------~~~ii~De~Y~~l~~--~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~ 270 (413)
T PLN00175 199 PTGKMFTREELELIASLCKEN------DVLAFTDEVYDKLAF--EGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGW 270 (413)
T ss_pred CCCcCCCHHHHHHHHHHHHHc------CcEEEEecccCcccc--CCcccChhhCCCCcCcEEEEecchhhccCcchheee
Confidence 999995 477899999999 999999999987642 111000 011 11123455567788775 7889999
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh--cHhHHHHHHHHHHHHHHHHHHHHhhCCCeE
Q 011057 288 VIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL--GFEGYRNVMENCHENAMVLKEGLEKTGRFN 365 (494)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l--~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (494)
++.... .+ ..+.....+.. .. .+.+.++++...+ ++..+++..+++.++++++.+.|++.+ ++
T Consensus 271 ~v~~~~-l~-~~l~~~~~~~~---------~~---~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~ 335 (413)
T PLN00175 271 AIAPPH-LT-WGVRQAHSFLT---------FA---TATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVG-FK 335 (413)
T ss_pred eEeCHH-HH-HHHHHHHhhcc---------CC---CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-Ce
Confidence 986432 22 11111111110 01 1222344444444 234467777888889999999999985 77
Q ss_pred EeecCCCccE-EEEEecCCCCC-CHHHHHHHHH-hcCceeeccc-cCC-CCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 366 IVSKDEGVPL-VAFSLKDNKRH-DEFEVAELLR-RFGWIVPAYT-MPA-DAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 366 ~~~~~~~~~~-v~f~~~~~~~~-~~~~l~~~L~-~~Gi~v~~~~-~~~-~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
+..+ ..++ +.+++.+ .+. +..++++.|. +.|+.+.... +.. ...+..++|+++.. +.++++..++.|+++
T Consensus 336 ~~~p--~g~~f~~~~~~~-~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~--~~e~l~~~~~rL~~~ 410 (413)
T PLN00175 336 VYPS--SGTYFVMVDHTP-FGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK--DEETLRAAVERMKTK 410 (413)
T ss_pred ecCC--CeeEEEEEeccc-cCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC--CHHHHHHHHHHHHHH
Confidence 6544 3344 4445422 123 4678988886 5699874322 111 11234689999973 566666555555554
Q ss_pred H
Q 011057 441 L 441 (494)
Q Consensus 441 ~ 441 (494)
+
T Consensus 411 ~ 411 (413)
T PLN00175 411 L 411 (413)
T ss_pred H
Confidence 4
No 75
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.93 E-value=1e-23 Score=213.27 Aligned_cols=337 Identities=16% Similarity=0.069 Sum_probs=223.9
Q ss_pred cCCCCCccccccc-C-CChHHHHHHHHHHhcccCCC---CCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 53 DGNPRLNLASFVT-T-WMEPECDKLMMAAINKNYVD---MDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 53 ~~~~~~~~~~~~~-~-~~~p~~~~~~~~~~~~~~~~---~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
+|+.++++.+..+ . .++|.+.+++.+++...... +....+...+..++++++++++|.+. .+++++|+
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~-------~i~~~~g~ 109 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGAER-------ALLFSSGY 109 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc-------EEEECcHH
Confidence 4556665555432 2 24678888888887652211 11222445667788999999998542 67777888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhC---Ce
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDEN---TI 204 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~---t~ 204 (494)
+++..++.++.. .+++|+++.+.|+++...+...|++++.++. .|++.+++.+++. +.
T Consensus 110 ~~~~~~l~~~~~-------------~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~i~~~~~~~~ 170 (385)
T PRK05958 110 AANLAVLTALAG-------------KGDLIVSDKLNHASLIDGARLSRARVRRYPH------NDVDALEALLAKWRAGRA 170 (385)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEeCccCHHHHHHHHhcCCceEEeCC------CCHHHHHHHHHhccCCCe
Confidence 888765544311 1268999999999999999999999888863 4788999988753 55
Q ss_pred EEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc--cccCCCceEEEEcCcccCCcC
Q 011057 205 CVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW--DFRLPLVKSINVSGHKYGLVY 282 (494)
Q Consensus 205 ~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~~p 282 (494)
++++..+.+++|...|+++|+++|+++ |+++++|++|+.+..+........ .+....-+++..+++|++. +
T Consensus 171 lvi~~~~~~~~G~~~~l~~i~~ia~~~------~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~ 243 (385)
T PRK05958 171 LIVTESVFSMDGDLAPLAELVALARRH------GAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALG-S 243 (385)
T ss_pred EEEEEecccCCCCcCCHHHHHHHHHHh------CCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcc-c
Confidence 666667888999999999999999999 999999999976533211000000 1111223466788999985 4
Q ss_pred CceEEEEEeCCCCccccccc-ccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhC
Q 011057 283 AGIGWVIWRNKEDLPEELIF-HINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKT 361 (494)
Q Consensus 283 ~g~G~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~ 361 (494)
.| |+++.+ +... +.+.. ...+ ...+..+.....++.++++.+... .+..+++.++++++.+.|+++
T Consensus 244 ~G-g~~~~~-~~~~-~~~~~~~~~~--------~~~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T PRK05958 244 SG-AAVLGS-ETLI-DYLINRARPF--------IFTTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRAL 310 (385)
T ss_pred CC-cEEEcC-HHHH-HHHHHhCccc--------eecCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc
Confidence 45 666543 3222 11111 0011 111222334445556666655332 467788889999999999988
Q ss_pred CCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 362 GRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 362 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
+ +++..+ ..+++.|.++. ..+..++.++|.++|+.+.....+....+..++|++++..++.++++.+++.|+++
T Consensus 311 ~-~~~~~~--~~~~~~~~~~~--~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 311 G-FQLMDS--QSAIQPLIVGD--NERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred C-CCcCCC--CCCEEEEEeCC--HHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 6 775543 46788888743 23566899999999999865433322234568999999888999999888888765
No 76
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.93 E-value=1.2e-23 Score=210.03 Aligned_cols=320 Identities=14% Similarity=0.064 Sum_probs=211.3
Q ss_pred HHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 011057 75 LMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDK 154 (494)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~ 154 (494)
++.+++..... ...+...+ +++.+++++|.+. ++++++||+|+..++.++... .+
T Consensus 4 ~~~~~~~~~~~--~~~~~~~~----~~~~la~~~~~~~-------~~~~~sgt~al~~~l~~l~~~------------~g 58 (352)
T cd00616 4 AVEEVLDSGWL--TLGPKVRE----FEKAFAEYLGVKY-------AVAVSSGTAALHLALRALGIG------------PG 58 (352)
T ss_pred HHHHHHHcCCc--cCCHHHHH----HHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHcCCC------------CC
Confidence 44455554333 23344444 5556999999753 788899999998888766210 13
Q ss_pred CeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcc
Q 011057 155 PNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKE 234 (494)
Q Consensus 155 ~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~ 234 (494)
++|+++..+|.+...++...|++++.++++++++.+|++++++++++++++|++++ ++|...|+++|.++|+++
T Consensus 59 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~--- 132 (352)
T cd00616 59 DEVIVPSFTFVATANAILLLGATPVFVDIDPDTYNIDPELIEAAITPRTKAIIPVH---LYGNPADMDAIMAIAKRH--- 132 (352)
T ss_pred CEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCCHHHHHHHHHHc---
Confidence 68999999999999999999999999999864588999999999988888887764 689999999999999999
Q ss_pred cCCCceEEEecccccccccccCCcccccccCCCceEEEEc--CcccCCcCCceEEEEEeCCCCcccccccc-cCCCCCC-
Q 011057 235 TGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVS--GHKYGLVYAGIGWVIWRNKEDLPEELIFH-INYLGAD- 310 (494)
Q Consensus 235 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~--~hK~l~~p~g~G~~~~~~~~~~~~~~~~~-~~y~~~~- 310 (494)
++++++|++|+.+.... .. .++. ..|+.+++ .+||+.++ ..|+++++++.......... ..+....
T Consensus 133 ---~i~li~D~a~~~g~~~~--~~---~~~~-~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (352)
T cd00616 133 ---GLPVIEDAAQALGATYK--GR---KVGT-FGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDRF 202 (352)
T ss_pred ---CCeEEEECCCCCCCeEC--CE---Eccc-CcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCCCC
Confidence 99999999998664311 10 0111 13445555 56998444 34666665543321111110 0000000
Q ss_pred -CCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC----CccEEEEEecCCCC
Q 011057 311 -QPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE----GVPLVAFSLKDNKR 385 (494)
Q Consensus 311 -~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~----~~~~v~f~~~~~~~ 385 (494)
...... +.......+. +++.....++++++.++..++++++++.|.++++++++.++. ...+++|.+.+..+
T Consensus 203 ~~~~~~~-~~~~~~~~~~--aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (352)
T cd00616 203 KYEHEIL-GYNYRLSEIQ--AAIGLAQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAG 279 (352)
T ss_pred cccccee-eeccCcCHHH--HHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCC
Confidence 000000 1110111121 222222345567788888999999999999988898775432 34577888753224
Q ss_pred CCHHHHHHHHHhcCceeeccccCCCCC--------------------CceEEEEEeccCCChHHHHHHHHHHH
Q 011057 386 HDEFEVAELLRRFGWIVPAYTMPADAQ--------------------HITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 386 ~~~~~l~~~L~~~Gi~v~~~~~~~~~~--------------------~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
.+..++.+.|.++||.++.+..|.... ...++|++++..+|++|++++++.|+
T Consensus 280 ~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 280 ESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 678899999999999775444332111 02589999999999999998887763
No 77
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.93 E-value=1.6e-23 Score=212.92 Aligned_cols=360 Identities=17% Similarity=0.090 Sum_probs=230.5
Q ss_pred HHHHHHHHHhhhhcCCCCCcccccccCCChHHHHHHHHHHhcccC-----C--CCCCChhhHHHHHHHHHHHHHHhCCCC
Q 011057 40 EAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNY-----V--DMDEYPVTTELQNRCVNIIARLFNAPL 112 (494)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-----~--~~~~~~~~~~le~~~~~~la~l~g~~~ 112 (494)
.+++..+.+.-... +..++|... ..+.+|.+.+++...+...+ . .+...+....+++.+++++++++|.+.
T Consensus 5 ~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~ 82 (402)
T cd00378 5 PEIAEIIKKENERQ-RETLELIAS-ENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEY 82 (402)
T ss_pred HHHHHHHHHHHHHH-HhCeeeecc-CCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCc
Confidence 34555555432222 234444332 22446788888876653211 1 122344666777778889999999974
Q ss_pred CCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHH-----HHHcCCeeEEEeccCC-
Q 011057 113 EDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKF-----ARYFEVELKEVKLSEG- 186 (494)
Q Consensus 113 ~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~-----~~~~G~~v~~v~~~~~- 186 (494)
. .+++++|++|+..++.++..+ +++|+++.+.|.++... ++..|.+++.++++.+
T Consensus 83 -----~-~v~~~sgt~a~~~~l~~l~~~-------------Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 143 (402)
T cd00378 83 -----A-NVQPHSGSQANLAVYFALLEP-------------GDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDP 143 (402)
T ss_pred -----e-eeecCCcHHHHHHHHHHhcCC-------------CCEEEEecCccCccccccccccccccceeEEEecCCcCc
Confidence 2 234446789998877776321 26899988888644222 5667887777776533
Q ss_pred -ccccCHHHHHHhhh-hCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc
Q 011057 187 -YYVMDPVKAVEMVD-ENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR 264 (494)
Q Consensus 187 -~~~~d~~~L~~~i~-~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~ 264 (494)
++.+|++++++++. .++++|+++++++ |...|+++|+++|+++ |+++++|++|..+.. ........+.
T Consensus 144 ~~~~id~~~l~~~i~~~~~~~v~~~~~~~--~~~~~~~~I~~l~~~~------~~~li~D~a~~~g~~--~~g~~~~~~~ 213 (402)
T cd00378 144 ETGLIDYDALEKMALEFKPKLIVAGASAY--PRPIDFKRFREIADEV------GAYLLVDMAHVAGLV--AGGVFPNPLP 213 (402)
T ss_pred ccCCcCHHHHHHHHHhCCCCEEEecCccc--CCCcCHHHHHHHHHhc------CCEEEEEccchhhhh--hcccCCCccc
Confidence 57899999999985 5788887777654 5677999999999999 999999999854322 1111111222
Q ss_pred CCCceEEEEcCcccCCcCCceEEEEEeCCCCccccccc-ccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHH
Q 011057 265 LPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIF-HINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNV 343 (494)
Q Consensus 265 ~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~ 343 (494)
++|+++.++|||+.+|. .|++++.++... ..+.. ...+. .++.....+.++..++..+...+++++
T Consensus 214 --~~dv~~~s~sK~l~G~~-gg~i~~~~~~~~-~~l~~~~~~~~---------~~~~~~~~~~a~~~al~~~~~~~~~~~ 280 (402)
T cd00378 214 --GADVVTTTTHKTLRGPR-GGLILTRKGELA-KKINSAVFPGL---------QGGPHLHVIAAKAVALKEALEPEFKAY 280 (402)
T ss_pred --CCcEEEeccccCCCCCC-ceEEEeccHHHH-HHHHHHhCccc---------cCCchHHHHHHHHHHHHHHhhHHHHHH
Confidence 57999999999985554 566666543332 22111 11111 012222334444444544433356778
Q ss_pred HHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCC---CCceEEEEE
Q 011057 344 MENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADA---QHITVLRVV 420 (494)
Q Consensus 344 ~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~---~~~~~lRvs 420 (494)
.++..++++++.+.|.+.+ +++...+...+++.+.+.+ .+.+...+.+.|.++||.+.....|... .....+|++
T Consensus 281 ~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~v~v~~~~-~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~ 358 (402)
T cd00378 281 AKQVVENAKALAEALKERG-FKVVSGGTDNHLVLVDLRP-KGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIG 358 (402)
T ss_pred HHHHHHHHHHHHHHHHhCC-CeEeecCCCCeEEEEeCCc-cCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEec
Confidence 8889999999999999985 8876543356677777743 2345667888899999998655455442 234679999
Q ss_pred eccC----CChHHHHHHHHHHHHHHHHHh
Q 011057 421 IRED----FSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 421 ~~~~----~t~~~id~~i~~l~~~~~~l~ 445 (494)
++.. ++.+|++++++.|++++++=+
T Consensus 359 ~~~~~~~~~~~~di~~~~~~l~~~~~~~~ 387 (402)
T cd00378 359 TPAMTTRGMGEEEMEEIADFIARALKDAE 387 (402)
T ss_pred CHHHHHhCCCHHHHHHHHHHHHHHHhccc
Confidence 8763 368889888888887665433
No 78
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.6e-23 Score=211.91 Aligned_cols=341 Identities=14% Similarity=0.122 Sum_probs=229.4
Q ss_pred CCcccccccCC-ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHH
Q 011057 57 RLNLASFVTTW-MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGL 135 (494)
Q Consensus 57 ~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~ 135 (494)
.++|..+.+.. +++.+.+++.+++......|...++..++++.+.+++.+.+|.+.+ ...+++|+|+++++.+++.
T Consensus 35 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~---~~~i~~t~G~~~al~~~~~ 111 (391)
T PRK08361 35 VISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVD---VDNVIVTAGAYEATYLAFE 111 (391)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC---cccEEEeCChHHHHHHHHH
Confidence 34555544443 3466888888777655555656678889998888888877775432 1358999999999988877
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCC-ccccCHHHHHHhhhhCCeEEEEeeCCCC
Q 011057 136 AFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEG-YYVMDPVKAVEMVDENTICVAAILGSTL 214 (494)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~t~~vv~~~~~~~ 214 (494)
++... ++.|++++++|..+...++..|++++.++++++ ++.+|++++++.+++++++|++++|+||
T Consensus 112 ~l~~~-------------g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NP 178 (391)
T PRK08361 112 SLLEE-------------GDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNP 178 (391)
T ss_pred HhcCC-------------CCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCC
Confidence 66321 258999999999999999999999999999753 4679999999999988999999999999
Q ss_pred cccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc-CCCceEEEEcCcccCC-cCCceEEEE
Q 011057 215 NGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGL-VYAGIGWVI 289 (494)
Q Consensus 215 tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~hK~l~-~p~g~G~~~ 289 (494)
||.+.| +++|+++|+++ ++++++|++|+.+.. .......... ....++++.+++|.++ ++.++|+++
T Consensus 179 tG~~~~~~~~~~l~~~~~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~ 250 (391)
T PRK08361 179 TGATLDKEVAKAIADIAEDY------NIYILSDEPYEHFLY--EGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVI 250 (391)
T ss_pred CCcCcCHHHHHHHHHHHHHc------CeEEEEEccccccee--CCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhc
Confidence 999988 88899999999 999999999987642 1111000011 1235677889999775 455689998
Q ss_pred EeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH----hHHHHHHHHHHHHHHHHHHHHhhCCCeE
Q 011057 290 WRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF----EGYRNVMENCHENAMVLKEGLEKTGRFN 365 (494)
Q Consensus 290 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~----~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (494)
+.++ .+.. +.....+... . .+.+.+.++...+.. +.+++..+...++++.+.+.|+++++++
T Consensus 251 ~~~~-~~~~-~~~~~~~~~~---------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 316 (391)
T PRK08361 251 APEQ-VIKD-MIKLHAYIIG---------N---VASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIK 316 (391)
T ss_pred cCHH-HHHH-HHHHHhhhcc---------C---CChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 7432 2211 1111111100 1 122334444444432 2456777777888899999999987677
Q ss_pred EeecCCCccEEE-EEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 366 IVSKDEGVPLVA-FSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 366 ~~~~~~~~~~v~-f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
+..+ ..+++. +.+++ .+++..++++.|. +.|+.+....... ..+..++|++++. +.++++..++.|++++
T Consensus 317 ~~~p--~g~~~~~~~l~~-~~~~~~~l~~~l~~~~gv~v~pg~~f~-~~~~~~iRi~~~~--~~~~l~~al~~l~~~l 388 (391)
T PRK08361 317 VFEP--KGAFYVFANIDE-TGMSSEDFAEWLLEKARVVVIPGTAFG-KAGEGYIRISYAT--SKEKLIEAMERMEKAL 388 (391)
T ss_pred ecCC--CEEEEEEEECCC-CCCCHHHHHHHHHHhCCEEEcCchhhC-CCCCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 6554 345444 45532 2457788998886 5799875433211 1234689999984 4555554444444443
No 79
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.93 E-value=2.6e-23 Score=207.12 Aligned_cols=330 Identities=18% Similarity=0.061 Sum_probs=225.3
Q ss_pred hHHHHHHHHH-HhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 011057 69 EPECDKLMMA-AINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA 147 (494)
Q Consensus 69 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~ 147 (494)
.|.+.+.+.+ ..+.+...+...++..++++.+.+++...+|.+.. ....++++|+++++..++.++...
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~---~~~~~~~~~~t~a~~~~~~~~~~~------- 82 (350)
T cd00609 13 PPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVP---PEEIVVTNGAQEALSLLLRALLNP------- 82 (350)
T ss_pred CHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC---cceEEEecCcHHHHHHHHHHhCCC-------
Confidence 4555544443 23333344566678889999988888888775321 235889999999998877766321
Q ss_pred cCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCH--HHHHHhhhhCCeEEEEeeCCCCcccccCHHHHH
Q 011057 148 EGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDP--VKAVEMVDENTICVAAILGSTLNGEFEDVKLLN 225 (494)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~--~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~ 225 (494)
+++|+++.+.|.++..+++..|.+++.++.+++ +..+. +.++..+.+++++|++++++|++|.+.|++++.
T Consensus 83 ------g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~ 155 (350)
T cd00609 83 ------GDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEE-GGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELE 155 (350)
T ss_pred ------CCEEEEcCCCchhHHHHHHHCCCEEEEEecccc-cCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHH
Confidence 368999999999999999999999999999764 34544 677777778899999999999999998866554
Q ss_pred ---HHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCC-cCCceEEEEEeCCCCcccccc
Q 011057 226 ---DLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELI 301 (494)
Q Consensus 226 ---~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~G~~~~~~~~~~~~~~~ 301 (494)
++|+++ |+++++|+||+++................+.|++..+++|+++ ++.++|+++++++... ..+.
T Consensus 156 ~l~~~~~~~------~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~-~~~~ 228 (350)
T cd00609 156 ELAELAKKH------GILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELL-ERLK 228 (350)
T ss_pred HHHHHHHhC------CeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHH-HHHH
Confidence 899999 9999999999876431111000011233467899999999987 5667899887653332 2221
Q ss_pred cccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEec
Q 011057 302 FHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLK 381 (494)
Q Consensus 302 ~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~ 381 (494)
....+. ..+.+.....++..+++... +++++..++..++++++.+.|++++...+. .+....++.+.+.
T Consensus 229 ~~~~~~---------~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~g~~~~~~~~ 297 (350)
T cd00609 229 KLLPYT---------TSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVV-KPSGGFFLWLDLP 297 (350)
T ss_pred HHHHhc---------ccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCccEEEEEecC
Confidence 111111 02223344444555554433 677888889999999999999998744332 2224456666664
Q ss_pred CCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 382 DNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 382 ~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
. ..+...+.+.|.+.|+.+.....+.. .+...+|++++.. .+|++++++.|+
T Consensus 298 ~--~~~~~~~~~~l~~~gi~i~~~~~~~~-~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 298 E--GDDEEFLERLLLEAGVVVRPGSAFGE-GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred C--CChHHHHHHHHHhCCEEEeccccccc-CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 3 23456677788888998765433221 3456899999876 788888887765
No 80
>PLN02483 serine palmitoyltransferase
Probab=99.93 E-value=1.3e-23 Score=216.46 Aligned_cols=341 Identities=15% Similarity=0.088 Sum_probs=216.4
Q ss_pred CcccccccCC---ChHHHHHHHHHHhcccCCCCCCCh---hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHH
Q 011057 58 LNLASFVTTW---MEPECDKLMMAAINKNYVDMDEYP---VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIM 131 (494)
Q Consensus 58 ~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~ 131 (494)
+||+++.+.. +++...+++.+++.....+...++ +......++++.+|+++|.+. .++.++|+.++.
T Consensus 103 ~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~-------ai~~~~G~~an~ 175 (489)
T PLN02483 103 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPA-------AIVFGMGYATNS 175 (489)
T ss_pred EEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCc-------EEEECCHHHHHH
Confidence 4555543332 123344444444444333322222 445666778888999999764 455566777777
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhh-------hCC-
Q 011057 132 LAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVD-------ENT- 203 (494)
Q Consensus 132 ~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-------~~t- 203 (494)
.++.++.. .+++|+++++.|.++...++..|++++.++.+ |+++|++.+. +++
T Consensus 176 ~~i~al~~-------------~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~------d~~~le~~l~~~i~~~~p~t~ 236 (489)
T PLN02483 176 TIIPALIG-------------KGGLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTH 236 (489)
T ss_pred HHHHHhCC-------------CCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC------CHHHHHHHHHhhhhccccccc
Confidence 55555422 13689999999999999999999999999853 3455544443 222
Q ss_pred ----eEEEEeeCC-CCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc--ccccCCCceEEEEcCc
Q 011057 204 ----ICVAAILGS-TLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE--WDFRLPLVKSINVSGH 276 (494)
Q Consensus 204 ----~~vv~~~~~-~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~h 276 (494)
++++++.+. +++|.+.++++|.++|+++ ++++++|+||+.+.......... ..+...++|++..+++
T Consensus 237 ~p~~k~livve~v~s~~G~~~~l~~I~~la~~~------~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfS 310 (489)
T PLN02483 237 RPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKY------KAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFT 310 (489)
T ss_pred cCCceEEEEECCCCCCCCcccCHHHHHHHHHHc------CCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecc
Confidence 455555555 6889999999999999999 99999999998543211100000 1111236899999999
Q ss_pred ccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc-H---hHHHHHHHHHHHHHH
Q 011057 277 KYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-F---EGYRNVMENCHENAM 352 (494)
Q Consensus 277 K~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~-~---~g~~~~~~~~~~~a~ 352 (494)
|.+.+ .| |+++.+ +..+ +.+.... ......++.++....+..++++.+. . +...++.+++.++++
T Consensus 311 Ks~g~-~G-G~i~~~-~~li-~~l~~~~-------~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~ 379 (489)
T PLN02483 311 KSFGS-CG-GYIAGS-KELI-QYLKRTC-------PAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSN 379 (489)
T ss_pred hhccc-Cc-eEEEcC-HHHH-HHHHHhC-------ccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHH
Confidence 98854 34 766543 3222 2221110 0001112222233334445565542 1 223456778899999
Q ss_pred HHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHH
Q 011057 353 VLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAER 432 (494)
Q Consensus 353 ~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~ 432 (494)
+|++.|++++ +++..+. ..+++.+.+... .+..++.++|.++|+.+....+|........+|++++..+|.+++++
T Consensus 380 ~l~~~L~~~G-~~v~~~~-~sp~~~l~l~~~--~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~ 455 (489)
T PLN02483 380 FFRSELQKMG-FEVLGDN-DSPVMPIMLYNP--AKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIK 455 (489)
T ss_pred HHHHHHHHCC-CcccCCC-CCCEEEEEECCH--HHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHH
Confidence 9999999985 8766543 345666655321 24568999999999998765555444445679999999899999999
Q ss_pred HHHHHHHHHHHHh
Q 011057 433 LVLDITKVLHELD 445 (494)
Q Consensus 433 ~i~~l~~~~~~l~ 445 (494)
+++.|+++++.+.
T Consensus 456 ~l~~L~~~~~~~~ 468 (489)
T PLN02483 456 ALEVISEVGDLVG 468 (489)
T ss_pred HHHHHHHHHHHhC
Confidence 9999988876543
No 81
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.93 E-value=2.4e-24 Score=214.49 Aligned_cols=330 Identities=15% Similarity=0.047 Sum_probs=221.4
Q ss_pred CChHHHHHHHHHHhcc----cCCCCCCC---hhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecC-hhHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINK----NYVDMDEY---PVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVG-SSEAIMLAGLAFK 138 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~----~~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g-gt~a~~~a~~a~~ 138 (494)
..++.+.+++...+.. +...+..+ +.+.++.+++++.+++++|.+.+ ..++||+| +|+++.+++..+.
T Consensus 9 ~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~----~~vvf~~gs~T~a~~~~~~~l~ 84 (355)
T cd00611 9 ALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDN----YKVLFLQGGATGQFAAVPLNLL 84 (355)
T ss_pred CCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCCchHHHHHHHHhcC
Confidence 3457788888887732 22223333 45668888999999999998532 45888887 9999998877762
Q ss_pred HHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccC-HHHHHHhhhhCCeEEEEeeCCCCccc
Q 011057 139 RKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMD-PVKAVEMVDENTICVAAILGSTLNGE 217 (494)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d-~~~L~~~i~~~t~~vv~~~~~~~tG~ 217 (494)
.+ + ....+|+.....|-+ .+.++..|++++.++++++....+ ++..+..+.+++++|.+++.+|.||.
T Consensus 85 ~~--------~--~~~~~i~~g~~~~~~-~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~ 153 (355)
T cd00611 85 GD--------K--GTADYVVTGAWSAKA-AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGV 153 (355)
T ss_pred CC--------C--CeEEEEECCHHHHHH-HHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccE
Confidence 21 0 001345544333333 446788899999999864311214 33333456778999999999999999
Q ss_pred ccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcc
Q 011057 218 FEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP 297 (494)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~ 297 (494)
.. + ++++.+ |++++||++++.+..|+ |+. ..|+..+++||++ +|+|+|+++++++...
T Consensus 154 ~~--~---~i~~~~------g~~~~VDa~qs~g~~~i-------dv~--~~~~~~ss~~K~l-GP~G~g~l~~~~~~~~- 211 (355)
T cd00611 154 EF--D---EVPDTG------GVPLVADMSSNILSRPI-------DVS--KFGVIYAGAQKNL-GPAGVTVVIVRKDLLG- 211 (355)
T ss_pred Ec--c---eecccC------CCeEEEEccccccCCCC-------CHH--HhCEEEeeccccc-CCCceEEEEECHHHHh-
Confidence 83 2 345558 99999999999887654 332 2333445699976 6999999999875321
Q ss_pred cccccccCCCCCC--CCCcccccCcchHHHHHHHHHHHHhcHh-HHHHHHHHHHHHHHHHHHHHhhCCCeE-Eeec-CCC
Q 011057 298 EELIFHINYLGAD--QPTFTLNFSKGSSQVIAQYYQLIRLGFE-GYRNVMENCHENAMVLKEGLEKTGRFN-IVSK-DEG 372 (494)
Q Consensus 298 ~~~~~~~~y~~~~--~~~~~~~~s~~~~~~~a~~~al~~l~~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-~~~ 372 (494)
...+..+.+.... .......+|++...++++.++++.+..+ |++++.++..+++++++++|++++++. ...+ ..+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~r 291 (355)
T cd00611 212 KARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRAR 291 (355)
T ss_pred hcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHc
Confidence 1111111111100 0111123688888899999999999888 799999999999999999999997663 2111 114
Q ss_pred c-cEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 373 V-PLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 373 ~-~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
. .+++|.+.+. .+ ..++.+.+.++|++++.... ..+.+|+|+..++|.+|||+|+++|+++
T Consensus 292 s~~vvsf~~~~~-~l-~~~~~~~~~r~G~~~~~~~~-----~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 292 SRMNVPFRLGKE-EL-EKEFLKEAEAAGMIGLKGHR-----SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred CceEEEEEcCCh-hh-hHHHHHHHHHCCCcccCCCc-----ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 4 4588987542 11 24555678889997432211 1257999999999999999999998874
No 82
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.93 E-value=7.6e-23 Score=208.56 Aligned_cols=350 Identities=16% Similarity=0.096 Sum_probs=227.6
Q ss_pred CCCCCcccccccC-----CChHHHHHHHHHHhcccCC-CCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 54 GNPRLNLASFVTT-----WMEPECDKLMMAAINKNYV-DMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 54 ~~~~~~~~~~~~~-----~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
+.+.++|+.+.++ .+++.+.+++.+++..+.. .|....+..++++.+.+++....|.+.+ ...+++|+|++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~---~~~v~it~G~~ 127 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELS---TDDIYLTAGCA 127 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCC---hhhEEEeCCHH
Confidence 4566666666543 3356788888888865432 4555567888888877777666565432 24589999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEecc-CCccccCHHHHHHhhhhCCeEE
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS-EGYYVMDPVKAVEMVDENTICV 206 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~~t~~v 206 (494)
+|+.+++.++.+. +++|++++++|+.+...+...|++++.+++. ++++.+|+++|+++++++++++
T Consensus 128 ~al~l~~~~l~~~-------------Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 194 (430)
T PLN00145 128 QAIEIIMSVLAQP-------------GANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAM 194 (430)
T ss_pred HHHHHHHHHhcCC-------------CCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEE
Confidence 9999888877321 2689999999999998999999999999875 3357899999999999999999
Q ss_pred EEeeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCc-ccc-ccc-CCCceEEEEcCcc-cC
Q 011057 207 AAILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPE-LEW-DFR-LPLVKSINVSGHK-YG 279 (494)
Q Consensus 207 v~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~-~~~-~~~~D~~~~~~hK-~l 279 (494)
++++|+||||.+.+ +++|+++|+++ ++++++|++|+.+.. .... ... .+. ...+-++. ++.| |+
T Consensus 195 ~i~~P~NPtG~v~~~~~l~~i~~~a~~~------~i~ii~De~Y~~~~~--~~~~~~~~~~~~~~~~vi~~~-S~SK~~~ 265 (430)
T PLN00145 195 VIINPNNPCGSVYSYEHLAKIAETARKL------GILVIADEVYDHLTF--GSKPFVPMGVFGEVAPVLTLG-SISKRWV 265 (430)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEeccchhhcc--CCCCccchhhhcccCcEEEEe-ccccccC
Confidence 99999999999987 78888999999 999999999987542 1111 110 111 12333333 4555 58
Q ss_pred CcCCceEEEEEeCCCCccccc---ccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc---HhHHHHHHHHHHHHHHH
Q 011057 280 LVYAGIGWVIWRNKEDLPEEL---IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG---FEGYRNVMENCHENAMV 353 (494)
Q Consensus 280 ~~p~g~G~~~~~~~~~~~~~~---~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~---~~g~~~~~~~~~~~a~~ 353 (494)
++++++||++..++..+.... .....+... ... ...+.+.++...+. ++.+++..+.+.++++.
T Consensus 266 ~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~--------~~~--~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 335 (430)
T PLN00145 266 VPGWRLGWIATCDPNGILKETKVVDSIRNYLNI--------STD--PATFVQGAIPQIIANTKEEFFTKTLGLLKETADI 335 (430)
T ss_pred CCCeeEEEEEEecchhhhhhhHHHHHHHHHhcc--------cCC--CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 899999999985443221110 000011100 000 12233444444443 34567778888889999
Q ss_pred HHHHHhhCCCeEEeecCCCccEEEEEecCC--CCC-CHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHH
Q 011057 354 LKEGLEKTGRFNIVSKDEGVPLVAFSLKDN--KRH-DEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTL 429 (494)
Q Consensus 354 l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~--~~~-~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~ 429 (494)
+.+.|++++++.....+....++.+.++.. .+. +..+++.+|. ++|+.+...... ....++|+++.. ..++
T Consensus 336 ~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~f---g~~~~lRis~~~--~~~~ 410 (430)
T PLN00145 336 CYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSAL---GMKNWLRITFAI--DPPS 410 (430)
T ss_pred HHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCcccc---CCCCeEEEEeCC--CHHH
Confidence 999999987776543333445555555321 112 4556776554 668876443322 124689999983 4455
Q ss_pred HHHHHHHHHHHHHH
Q 011057 430 AERLVLDITKVLHE 443 (494)
Q Consensus 430 id~~i~~l~~~~~~ 443 (494)
++..++.|.+++++
T Consensus 411 l~~al~rl~~~~~~ 424 (430)
T PLN00145 411 LEDGLERLKSFCLR 424 (430)
T ss_pred HHHHHHHHHHHHHH
Confidence 55444444444433
No 83
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.93 E-value=7e-23 Score=207.62 Aligned_cols=344 Identities=15% Similarity=0.066 Sum_probs=231.3
Q ss_pred CCCcccccccCCC-hHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHH
Q 011057 56 PRLNLASFVTTWM-EPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAG 134 (494)
Q Consensus 56 ~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~ 134 (494)
+.++|..+.+..+ ++.+.+++.+.+......|....+...+++.+.+++.+.+|...+ ...+++|+|+++++..++
T Consensus 32 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~---~~~i~~~~g~~~a~~~~~ 108 (393)
T PRK05764 32 DVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYD---PSQVIVTTGAKQALYNAF 108 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCC---HHHEEEeCCcHHHHHHHH
Confidence 3355566555443 567888888877654445655667888888888888777675331 245899999999998877
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEeeCCC
Q 011057 135 LAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAILGST 213 (494)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~~~~ 213 (494)
.++... ++.|+++++.|..+..+++..|++++.+++++ +++.+|++++++++++++++|++++++|
T Consensus 109 ~~~~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~N 175 (393)
T PRK05764 109 MALLDP-------------GDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSN 175 (393)
T ss_pred HHhcCC-------------CCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCC
Confidence 766321 25899999999999999999999999999973 3478999999999988889999999999
Q ss_pred Cccccc---CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCc---cc-ccccCCCceEEEEcCcccCC-cCCce
Q 011057 214 LNGEFE---DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPE---LE-WDFRLPLVKSINVSGHKYGL-VYAGI 285 (494)
Q Consensus 214 ~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~hK~l~-~p~g~ 285 (494)
|||.+. ++++|.++|+++ ++++++|++|+.+.. .... .. ........+.+..++.|.+. ++.++
T Consensus 176 PtG~~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~Ri 247 (393)
T PRK05764 176 PTGAVYSPEELEAIADVAVEH------DIWVLSDEIYEKLVY--DGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRL 247 (393)
T ss_pred CCCcccCHHHHHHHHHHHHHC------CcEEEEeccccceee--CCCCcccHHHcCCCCcCCEEEEecCcccccCcccee
Confidence 999985 488899999999 999999999987542 1111 11 00112234666777889875 55568
Q ss_pred EEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc--HhHHHHHHHHHHHHHHHHHHHHhhCCC
Q 011057 286 GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--FEGYRNVMENCHENAMVLKEGLEKTGR 363 (494)
Q Consensus 286 G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~--~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (494)
|+++.. +... ..+....... +. ..+.+.+++++..+. .+.+++..+++.++++++.+.|+++++
T Consensus 248 G~i~~~-~~~~-~~~~~~~~~~----------~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 313 (393)
T PRK05764 248 GYAAGP-KELI-KAMSKLQSHS----------TS--NPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPG 313 (393)
T ss_pred EEEecC-HHHH-HHHHHHHhhc----------cc--CCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 988753 2222 2111100000 00 112334455555543 345566777778888999999999866
Q ss_pred eEEeecCCCccEEEEEecCC---CCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHH
Q 011057 364 FNIVSKDEGVPLVAFSLKDN---KRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITK 439 (494)
Q Consensus 364 ~~~~~~~~~~~~v~f~~~~~---~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~ 439 (494)
+.+..+. ...++.+.+... .+.+..++.+.|. +.|+.+....... ...++|+++.. +.++++.+++.|.+
T Consensus 314 ~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~---~~~~vRis~~~--~~~~~~~~i~~l~~ 387 (393)
T PRK05764 314 LECPKPE-GAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFG---APGYVRLSYAT--SLEDLEEGLERIER 387 (393)
T ss_pred CcccCCC-cceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccC---CCCEEEEEecC--CHHHHHHHHHHHHH
Confidence 8766442 222344455321 1113478888775 5799875432221 14689999874 68888888888877
Q ss_pred HHHH
Q 011057 440 VLHE 443 (494)
Q Consensus 440 ~~~~ 443 (494)
++++
T Consensus 388 ~~~~ 391 (393)
T PRK05764 388 FLES 391 (393)
T ss_pred HHHh
Confidence 7664
No 84
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.93 E-value=3.1e-23 Score=209.09 Aligned_cols=341 Identities=18% Similarity=0.110 Sum_probs=224.4
Q ss_pred CCCcccccccC-CChHHHHHHHHHHhcccCC-CCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHH
Q 011057 56 PRLNLASFVTT-WMEPECDKLMMAAINKNYV-DMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLA 133 (494)
Q Consensus 56 ~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a 133 (494)
..++|+...++ ++++.+.+++.++++.... .|....+.. ++++++++++|.++ ..+++|+|+++++.++
T Consensus 29 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~----~lr~~ia~~l~~~~-----~~v~~~~g~t~al~~~ 99 (380)
T PRK06225 29 EMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFP----ELRELILKDLGLDD-----DEALITAGATESLYLV 99 (380)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchH----HHHHHHHHhcCCCC-----CcEEEeCCHHHHHHHH
Confidence 33445544333 4567888888888765322 232222333 46667889999875 3589999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC--CccccCHHHHHHhhhhCCeEEEEeeC
Q 011057 134 GLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE--GYYVMDPVKAVEMVDENTICVAAILG 211 (494)
Q Consensus 134 ~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~--~~~~~d~~~L~~~i~~~t~~vv~~~~ 211 (494)
+.++... +++|+++++.|..+...++..|++++.++++. +++.+|++++++++++++++|+++++
T Consensus 100 ~~~~~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p 166 (380)
T PRK06225 100 MRAFLSP-------------GDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDP 166 (380)
T ss_pred HHHhcCC-------------CCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCC
Confidence 8776321 25799999999888888899999999998742 24689999999999988999999999
Q ss_pred CCCccccc---CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCC-cCCceEE
Q 011057 212 STLNGEFE---DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYAGIGW 287 (494)
Q Consensus 212 ~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~G~ 287 (494)
+||||.+. ++++|+++|+++ |+++++|++|+.+.... +.. ..+. .....+..++.|+++ ++.++|+
T Consensus 167 ~NptG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~~~--~~~-~~~~-~~~~i~~~s~SK~~g~~G~RiG~ 236 (380)
T PRK06225 167 LNPLGSSYTEEEIKEFAEIARDN------DAFLLHDCTYRDFAREH--TLA-AEYA-PEHTVTSYSFSKIFGMAGLRIGA 236 (380)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHC------CcEEEEehhHHHHhccC--Cch-hhcC-CCCEEEEeechhhcCCccceeEE
Confidence 99999974 488999999999 99999999997543211 100 0111 123455557789884 4556899
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc--HhHHHHHHHHHHHHHHHHHHHHhhCCCeE
Q 011057 288 VIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--FEGYRNVMENCHENAMVLKEGLEKTGRFN 365 (494)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (494)
+++++. .+ ..+... ... . . +. +.+++.++...+. .+-+++..+...++++++.+.|++++++.
T Consensus 237 i~~~~~-l~-~~~~~~---~~~---~--~-~~----~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 301 (380)
T PRK06225 237 VVATPD-LI-EVVKSI---VIN---D--L-GT----NVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVF 301 (380)
T ss_pred EecCHH-HH-HHHHHH---Hhc---c--c-CC----CHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCc
Confidence 987532 22 221111 000 0 0 11 1122222222221 22234444555667778889998876554
Q ss_pred EeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 366 IVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 366 ~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
+...+...+++.+.+.. .+++..+++++|.++|+.+..........+..++|+++.. ++++++++++.|+++++.++
T Consensus 302 ~~~~~~~g~~~~~~~~~-~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~--~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 302 LPVYPSHGNMMVIDISE-AGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSI--PREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred cccCCCCCeEEEEEccc-ccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCC--CHHHHHHHHHHHHHHHHHhh
Confidence 32222245666666643 2467889999999999987543221112245689999863 68899999999999999886
Q ss_pred c
Q 011057 446 S 446 (494)
Q Consensus 446 ~ 446 (494)
+
T Consensus 379 ~ 379 (380)
T PRK06225 379 T 379 (380)
T ss_pred c
Confidence 4
No 85
>PRK07682 hypothetical protein; Validated
Probab=99.93 E-value=3e-23 Score=209.09 Aligned_cols=345 Identities=12% Similarity=0.070 Sum_probs=231.5
Q ss_pred CcccccccCC-ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHH
Q 011057 58 LNLASFVTTW-MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLA 136 (494)
Q Consensus 58 ~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a 136 (494)
++|+.+.+.. +++.+.+++.+.+......|...++..++++++.+++.+.+|.+.+. ...+++|+|+++|+.+++.+
T Consensus 23 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~~i~~t~G~~~al~~~~~~ 100 (378)
T PRK07682 23 ISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDP--NDEIIVTVGASQALDVAMRA 100 (378)
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCChHHHHHHHHHH
Confidence 4455544433 23456777777665444446666788999999999998887875321 12489999999999988776
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEeeCCCCc
Q 011057 137 FKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAILGSTLN 215 (494)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~~~~~t 215 (494)
+.++ ++.|++++++|..+...++..|.+++.++++. +++.+|+++|++++.+++++|++++|+|||
T Consensus 101 l~~~-------------gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPt 167 (378)
T PRK07682 101 IINP-------------GDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPT 167 (378)
T ss_pred hCCC-------------CCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCc
Confidence 6321 26899999999999999999999999998863 347899999999998889999999999999
Q ss_pred ccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCC-cCCceEEEEEe
Q 011057 216 GEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYAGIGWVIWR 291 (494)
Q Consensus 216 G~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~G~~~~~ 291 (494)
|.+.+ +++|.++|+++ ++++++|++|+.+...-.............-.++..++.|.+. ++.++|+++..
T Consensus 168 G~~~s~~~~~~l~~~~~~~------~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~ 241 (378)
T PRK07682 168 GAVLNKSELEEIAVIVEKH------DLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP 241 (378)
T ss_pred CcCcCHHHHHHHHHHHHHc------CcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcC
Confidence 99854 88899999999 9999999999876421000000000011123466677889875 66779998864
Q ss_pred CCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh--cHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeec
Q 011057 292 NKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL--GFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSK 369 (494)
Q Consensus 292 ~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l--~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (494)
+. .+ +.+.....+.. .+ .+.+.+.++...+ +...+++..+++.++++++.+.|++++ +++..+
T Consensus 242 ~~-~i-~~l~~~~~~~~---------~~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~p 306 (378)
T PRK07682 242 VY-FS-EAMLKIHQYSM---------MC---APTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIG-LTCHVP 306 (378)
T ss_pred HH-HH-HHHHHHHHhhc---------cC---CCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCC
Confidence 32 22 22111111100 01 1223444445444 234456777788889999999999985 765443
Q ss_pred CCCccEEEEEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 370 DEGVPLVAFSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 370 ~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
..+++.|......+.+..++++.|. ++|+.+....... ..+..++|++++. +.++++..++.|+++++.
T Consensus 307 --~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~-~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 307 --GGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFG-ESGEGFIRCSYAT--SLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred --CeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhC-cCCCCeEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 3455554422122457788998876 6899875432221 2235689999984 577888777777776654
No 86
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.93 E-value=9.9e-23 Score=206.61 Aligned_cols=344 Identities=12% Similarity=0.050 Sum_probs=228.5
Q ss_pred CcccccccC--CChHHHHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHH
Q 011057 58 LNLASFVTT--WMEPECDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAG 134 (494)
Q Consensus 58 ~~~~~~~~~--~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~ 134 (494)
++|..+.+. ++++.+.+.+.+++... ...|...++..++++.+.+++++.+|.+.+. ...+++|+|+++++.+++
T Consensus 42 i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~--~~~I~it~Ga~~al~~~~ 119 (405)
T PRK06207 42 VDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDA--ADELIITPGTQGALFLAV 119 (405)
T ss_pred eecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCCEEEeCCcHHHHHHHH
Confidence 455544443 34566777777776543 2346666688899999999999999975421 035899999999998887
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC----CccccCHHHHHHhhhhCCeEEEEee
Q 011057 135 LAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE----GYYVMDPVKAVEMVDENTICVAAIL 210 (494)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~----~~~~~d~~~L~~~i~~~t~~vv~~~ 210 (494)
.++... +++|+++.++|+.+...++..|++++.++++. +++.+|+++|++++.+++++|++++
T Consensus 120 ~~l~~~-------------Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~ 186 (405)
T PRK06207 120 AATVAR-------------GDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSN 186 (405)
T ss_pred HHhcCC-------------CCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECC
Confidence 776331 36899999999999999999999999998861 2368999999999988899999999
Q ss_pred CCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc--ccccC-CCceEEEEcCcccCC-cCC
Q 011057 211 GSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE--WDFRL-PLVKSINVSGHKYGL-VYA 283 (494)
Q Consensus 211 ~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~-~~~D~~~~~~hK~l~-~p~ 283 (494)
|+||||.+.+ +++|+++|+++ ++++++|++|+.+.. ...... ..+.. ..--++..++.|.+. ++.
T Consensus 187 P~NPTG~~~s~e~l~~l~~~a~~~------~~~iI~De~Y~~~~~--~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGl 258 (405)
T PRK06207 187 PNNPAGVVYSAEEIAQIAALARRY------GATVIVDQLYSRLLY--DGTSYTHLRALPIDPENVITIMGPSKTESLSGY 258 (405)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEecccccccc--CCCCCCchhcCCCCcCcEEEEecchhhccCccc
Confidence 9999999976 77788899999 999999999987542 111000 01110 112245567788775 778
Q ss_pred ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc--HhHHHHHHHHHHHHHHHHHHHHhhC
Q 011057 284 GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--FEGYRNVMENCHENAMVLKEGLEKT 361 (494)
Q Consensus 284 g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~--~~g~~~~~~~~~~~a~~l~~~L~~~ 361 (494)
++||++... ..+ ..+.....+.. ... ..+.+.++..++. ...+++..+...++++++.+.|+++
T Consensus 259 RiG~ii~~~-~l~-~~~~~~~~~~~---------~~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 324 (405)
T PRK06207 259 RLGVAFGSP-AII-DRMEKLQAIVS---------LRA---AGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGV 324 (405)
T ss_pred ceEEEEcCH-HHH-HHHHHHHhHhc---------cCC---CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 899987543 222 22111111110 001 1122333334442 2335667777778888999999888
Q ss_pred CCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 362 GRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 362 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
+++++..+. ...++.++++. ...+..+++++|. +.|+.+....... ..+..++|+++.. +.++++..++.|.++
T Consensus 325 ~~~~~~~p~-gg~fl~~~l~~-~~~~~~~~~~~l~~~~gV~v~pG~~F~-~~~~~~~Ris~~~--~~~~l~~al~rl~~~ 399 (405)
T PRK06207 325 EGVFVRAPQ-AGSYLFPRLPR-LAVSLHDFVKILRLQAGVIVTPGTEFS-PHTADSIRLNFSQ--DHAAAVAAAERIAQL 399 (405)
T ss_pred CCceecCCC-eeEEEEEeCcc-cCCCHHHHHHHHHHhcCEEEeCchHhC-CCCCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 667755442 34455666642 1346788999987 6799875433211 1234689999984 456666555555555
Q ss_pred HHH
Q 011057 441 LHE 443 (494)
Q Consensus 441 ~~~ 443 (494)
+++
T Consensus 400 l~~ 402 (405)
T PRK06207 400 IER 402 (405)
T ss_pred HHH
Confidence 544
No 87
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.93 E-value=2.6e-23 Score=210.24 Aligned_cols=341 Identities=16% Similarity=0.109 Sum_probs=229.3
Q ss_pred hcCCCCCcccccc-cCC-ChHHHHHHHHHHhcccC---CCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecCh
Q 011057 52 LDGNPRLNLASFV-TTW-MEPECDKLMMAAINKNY---VDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGS 126 (494)
Q Consensus 52 ~~~~~~~~~~~~~-~~~-~~p~~~~~~~~~~~~~~---~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~gg 126 (494)
.+|+.+++|.+.. ..+ ++|.+.+++.+++.+.. ..+....+..++.+++++++++++|.+. .+++++|
T Consensus 30 ~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~-------~i~~~sG 102 (385)
T TIGR01825 30 VNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEA-------ALVFQSG 102 (385)
T ss_pred ECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCc-------EEEECcH
Confidence 4556666666543 233 57788888888876532 2333445778889999999999999753 3445555
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh----C
Q 011057 127 SEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE----N 202 (494)
Q Consensus 127 t~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~ 202 (494)
++++..++.++.. .++.|+++.+.|.++...+...|+++..++ .+|++++++.+.+ +
T Consensus 103 ~~a~~~a~~~~~~-------------~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~------~~d~~~l~~~l~~~~~~~ 163 (385)
T TIGR01825 103 FNTNQGVLSALLR-------------KGDIVLSDELNHASIIDGLRLTKATKKIYK------HADMDDLDRVLRENPSYG 163 (385)
T ss_pred HHHHHHHHHHhCC-------------CCCEEEEEccccHHHHHHHHhcCCceEEeC------CCCHHHHHHHHHhhccCC
Confidence 8888876665522 125788999999999888888888876653 4778888887764 5
Q ss_pred CeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCC-cc-cccccCCCceEEEEcCcccCC
Q 011057 203 TICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYP-EL-EWDFRLPLVKSINVSGHKYGL 280 (494)
Q Consensus 203 t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~hK~l~ 280 (494)
+++|++....+++|.+.|+++|.++|+++ ++++++|++|+.+..+.... .. ...+. ..+|++..+++|++.
T Consensus 164 ~~~v~~~~v~~~tG~~~~~~~i~~l~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~ 236 (385)
T TIGR01825 164 KKLIVTDGVFSMDGDVAPLPEIVELAERY------GAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIG 236 (385)
T ss_pred CeEEEEecCCcCCCCccCHHHHHHHHHHh------CCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhh
Confidence 77888888889999999999999999999 99999999997654321000 00 01122 357888899999985
Q ss_pred cCCceEEEEEeCCCCcccccccc-cCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHh
Q 011057 281 VYAGIGWVIWRNKEDLPEELIFH-INYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLE 359 (494)
Q Consensus 281 ~p~g~G~~~~~~~~~~~~~~~~~-~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~ 359 (494)
.+ | |+++.+ +..+ +.+... ..|. +.+..+.....++.++++.+... .+..++..++++++.+.|+
T Consensus 237 ~~-g-G~~~~~-~~~~-~~~~~~~~~~~--------~~~~~~~~~~~a~~~al~~~~~~--~~~~~~~~~~~~~l~~~L~ 302 (385)
T TIGR01825 237 VV-G-GYAAGH-KELI-EYLKNRARPFL--------FSTAQPPAVVAALAAAVDELQRS--PELMERLWDNTRFFKAGLG 302 (385)
T ss_pred cC-C-CEEecC-HHHH-HHHHHhCcccc--------ccCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHH
Confidence 43 3 666543 2222 211111 1111 11222223344555666554322 2456677788999999999
Q ss_pred hCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHH
Q 011057 360 KTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITK 439 (494)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~ 439 (494)
+++ +++..+ ..+++.+.+.. ..+..++++.|.++|+.++...++....+...+|++.+..++.++++++++.|++
T Consensus 303 ~~g-~~~~~~--~~~~~~~~~~~--~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~ 377 (385)
T TIGR01825 303 KLG-YDTGGS--ETPITPVVIGD--EKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEK 377 (385)
T ss_pred HcC-CCCCCC--CCCEEEEEECC--HHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence 885 776543 34666666532 1245689999999999886544443334556899999888999999999999998
Q ss_pred HHHHH
Q 011057 440 VLHEL 444 (494)
Q Consensus 440 ~~~~l 444 (494)
+++.+
T Consensus 378 ~~~~~ 382 (385)
T TIGR01825 378 VGKEL 382 (385)
T ss_pred HHHHh
Confidence 87654
No 88
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.93 E-value=2.1e-23 Score=208.89 Aligned_cols=335 Identities=15% Similarity=0.057 Sum_probs=221.6
Q ss_pred hcCCCCCcccccccC--CChHHHHHHHHHHhcccCCCCCCC---hhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecCh
Q 011057 52 LDGNPRLNLASFVTT--WMEPECDKLMMAAINKNYVDMDEY---PVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGS 126 (494)
Q Consensus 52 ~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~gg 126 (494)
.+|+.+++|.++.+. +.+|.+.+++.+++......+..+ .+...+..++++.+++++|.+. .+++++|
T Consensus 13 ~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~-------~i~~~~G 85 (360)
T TIGR00858 13 RDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEA-------ALLFSSG 85 (360)
T ss_pred ECCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCC-------EEEECch
Confidence 355555555555331 345788888888876533222222 2344566678888999998643 4555566
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh----C
Q 011057 127 SEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE----N 202 (494)
Q Consensus 127 t~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~ 202 (494)
++++..++.++.. .+++|+++.+.|.++...++..|++++.++ .+|++.|++.+++ +
T Consensus 86 ~~~~~~~l~~~~~-------------~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~------~~d~~~l~~~~~~~~~~~ 146 (360)
T TIGR00858 86 YLANVGVISALVG-------------KGDLILSDALNHASLIDGCRLSGARVRRYR------HNDVEHLERLLEKNRGER 146 (360)
T ss_pred HHHHHHHHHHhCC-------------CCCEEEEEccccHHHHHHHHhcCCceEEec------CCCHHHHHHHHHHcccCC
Confidence 7777765544421 125899999999999999999999988776 2588899988875 3
Q ss_pred CeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc--ccccCCCceEEEEcCcccCC
Q 011057 203 TICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE--WDFRLPLVKSINVSGHKYGL 280 (494)
Q Consensus 203 t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~ 280 (494)
+++|++..+++++|.+.|+++|.++|+++ ++++++|++|+.+..+....... ..+...+.+++..+++|++.
T Consensus 147 ~~~v~~~~~~~~~G~~~~~~~i~~l~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~ 220 (360)
T TIGR00858 147 RKLIVTDGVFSMDGDIAPLPQLVALAERY------GAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALG 220 (360)
T ss_pred CeEEEEeCCccCCCCCcCHHHHHHHHHHc------CcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhh
Confidence 67788788889999999999999999999 99999999998653221100000 11111356888889999885
Q ss_pred cCCceEEEEEeCCCCcccccc-cccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHh
Q 011057 281 VYAGIGWVIWRNKEDLPEELI-FHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLE 359 (494)
Q Consensus 281 ~p~g~G~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~ 359 (494)
+ .| |+++.+. ... ..+. ....+ ...++.+....+++.++++.+.. .++..++..++++++.+.|+
T Consensus 221 ~-~g-G~~~~~~-~~~-~~~~~~~~~~--------~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~ 286 (360)
T TIGR00858 221 S-YG-AYVAGSQ-ALI-DYLINRARTL--------IFSTALPPAVAAAALAALELIQE--EPWRREKLLALIARLRAGLE 286 (360)
T ss_pred c-cC-cEEEcCH-HHH-HHHHHhCccc--------eecCCCCHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHH
Confidence 4 45 7766432 222 1111 00111 11122223334455566654432 24667888999999999999
Q ss_pred hCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHH
Q 011057 360 KTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
+++ +++..+ ..+++.+.+.. ..+..++.++|.++||.+.....+....+..++|++++..++.++++++++.|
T Consensus 287 ~~~-~~~~~~--~~~~~~~~~~~--~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 287 ALG-FTLMPS--CTPIVPVIIGD--NASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEAL 359 (360)
T ss_pred HcC-CccCCC--CCCEEEEEeCC--HHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhh
Confidence 986 776533 46678777743 23467899999999999864333322234457999999889999999888765
No 89
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=5.5e-23 Score=205.23 Aligned_cols=327 Identities=11% Similarity=0.079 Sum_probs=218.7
Q ss_pred CCCCcccccccC-CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHH
Q 011057 55 NPRLNLASFVTT-WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLA 133 (494)
Q Consensus 55 ~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a 133 (494)
.+.++|..+.++ ++++.+.+++.+.+... ..|. .++ ..++++++++++|.++ ..+++|+|+++++..+
T Consensus 20 ~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~-~~y~-~~~----~~~lr~~ia~~~~~~~-----~~i~it~Ga~~~l~~~ 88 (356)
T PRK08056 20 DQLLDFSANINPLGMPVSLKRAIIDNLDCA-ERYP-DVE----YRHLHQALARHHQVPA-----SWILAGNGETESIFAV 88 (356)
T ss_pred hhEEEeccccCCCCCCHHHHHHHHHHHHhc-ccCc-Ccc----HHHHHHHHHHHhCcCh-----hhEEECCCHHHHHHHH
Confidence 333444544443 35567888877665432 1221 122 2457778999999876 3588999999999877
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEeeCC
Q 011057 134 GLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAILGS 212 (494)
Q Consensus 134 ~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~~~ 212 (494)
+.++ .. +.+++..+.+..+...++..|++++.+++++ +++.+| +++++.+.+++++|++++|+
T Consensus 89 ~~~l-~~--------------g~viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~ 152 (356)
T PRK08056 89 VSGL-KP--------------RRAMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPN 152 (356)
T ss_pred HHHh-CC--------------CCEEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCc
Confidence 6654 10 2466667888888889999999999999874 335566 45566677788999999999
Q ss_pred CCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCC-cCCceEEE
Q 011057 213 TLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYAGIGWV 288 (494)
Q Consensus 213 ~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~G~~ 288 (494)
||||.+.+ +++|+++|+++ ++++++|++|..+.. ........+.....+++..+++|++. ++.++||+
T Consensus 153 NPTG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~ 224 (356)
T PRK08056 153 NPTGLLPERQLLQAIAERCKSL------NIALILDEAFIDFIP--DETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYL 224 (356)
T ss_pred CCCCCCCCHHHHHHHHHHHHhc------CCEEEEecchhccCC--cchHHHHHhccCCCEEEEEechhhccCcchhheee
Confidence 99999988 78899999999 999999999977531 11000001111234577789999887 78899999
Q ss_pred EEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc-HhHHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Q 011057 289 IWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-FEGYRNVMENCHENAMVLKEGLEKTGRFNIV 367 (494)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 367 (494)
+..++..+ ..+.. +. . . . ..+.+++.++...+. .+..++..+...++++++.+.|++++++.+.
T Consensus 225 v~~~~~~~-~~l~~---~~-~---~----~---~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 289 (356)
T PRK08056 225 VNSDDAAV-ARMRR---QQ-M---P----W---SINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW 289 (356)
T ss_pred ecCCHHHH-HHHHH---hC-C---C----C---chhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc
Confidence 87543222 11111 00 0 0 0 122344555555553 3334555677788889999999998777764
Q ss_pred ecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 368 SKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 368 ~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
. + ..+++.+.+.. +..++++.|.++|+.+........ .+..++|++++ +.++.++|++.|++++
T Consensus 290 ~-~-~~~~~~~~~~~----~~~~~~~~l~~~gI~v~~~~~f~~-~~~~~iRis~~---~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 290 P-G-RANYLFLRCER----PDIDLQRALLTQRILIRSCANYPG-LDSRYYRVAIR---SAAENERLLAALRNVL 353 (356)
T ss_pred C-C-CCcEEEEEcCC----ChHHHHHHHHHCCeEEEECCCCCC-CCCCEEEEEEc---CHHHHHHHHHHHHHHH
Confidence 3 3 45666666532 356899999999998865433211 23457999997 6788999999988764
No 90
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.93 E-value=7.9e-23 Score=206.51 Aligned_cols=344 Identities=15% Similarity=0.078 Sum_probs=227.0
Q ss_pred CCcccccccCC-ChHHHHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHH
Q 011057 57 RLNLASFVTTW-MEPECDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAG 134 (494)
Q Consensus 57 ~~~~~~~~~~~-~~p~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~ 134 (494)
.+.|+.+.+.+ +++.+.+++.+.+... ...|....+..++++.+++++++.+|.+.+. ...+++|+|+++++..++
T Consensus 29 ~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~--~~~i~~t~G~~~~l~~~~ 106 (389)
T PRK05957 29 TISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNN--EQAIVVTAGSNMAFMNAI 106 (389)
T ss_pred eEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCeEEEeCChHHHHHHHH
Confidence 35556655543 4566888887776532 2345556688899999999999999975310 134889999999998777
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCC
Q 011057 135 LAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTL 214 (494)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~ 214 (494)
.+... .+++|+++++.|..+...++..|++++.++.+++ +.+|+++|++++++++++|++++++||
T Consensus 107 ~~~~~-------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~klv~~~~p~NP 172 (389)
T PRK05957 107 LAITD-------------PGDEIILNTPYYFNHEMAITMAGCQPILVPTDDN-YQLQPEAIEQAITPKTRAIVTISPNNP 172 (389)
T ss_pred HHhcC-------------CCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCC-CCcCHHHHHHhcCcCceEEEEeCCCCC
Confidence 66532 1268999999998887778889999999998754 789999999999988999999999999
Q ss_pred cccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCc-cc-ccc-cCCCceEEEEcCcccC-CcCCceEE
Q 011057 215 NGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPE-LE-WDF-RLPLVKSINVSGHKYG-LVYAGIGW 287 (494)
Q Consensus 215 tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~-~~~-~~~~~D~~~~~~hK~l-~~p~g~G~ 287 (494)
||.+.+ +++|+++|+++ |+++++|++|+.+.. .... .. ..+ ....-.++..+..|.+ .++.++|+
T Consensus 173 tG~~~~~~~~~~i~~~a~~~------~~~li~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 244 (389)
T PRK05957 173 TGVVYPEALLRAVNQICAEH------GIYHISDEAYEYFTY--DGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGY 244 (389)
T ss_pred CCcCcCHHHHHHHHHHHHHc------CcEEEEeccchhccC--CCCCccChhhCCCccCcEEEEecchhhccCccceeEE
Confidence 999977 88899999999 999999999987542 1111 00 011 1111234455677876 46677999
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc--HhHHHHHHHHHHHHHHHHHHHHhhCCCeE
Q 011057 288 VIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--FEGYRNVMENCHENAMVLKEGLEKTGRFN 365 (494)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (494)
+++.++ .+ +.+.....+.. .. .+...+.++...+. .+.+++..+.+.++++++.+.|++++++.
T Consensus 245 ~~~~~~-~~-~~~~~~~~~~~---------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~ 310 (389)
T PRK05957 245 MVIPIH-LL-EAIKKIQDTIL---------IC---PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRC 310 (389)
T ss_pred EecCHH-HH-HHHHHHHhhcc---------cC---CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 987442 22 22111111110 01 11233445455452 33456777778888899999999887542
Q ss_pred EeecCCCccE-EEEEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 366 IVSKDEGVPL-VAFSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 366 ~~~~~~~~~~-v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
.+.++ ..++ +.+.+. .+++..+++++|. ++|+.+....... ..+..++|++++. .+.++++..++.|.+.++.
T Consensus 311 ~~~~~-~gg~~~~~~~~--~~~~~~~~~~~l~~~~gv~v~pg~~f~-~~~~~~iRis~~~-~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 311 TLHPA-NGAFYCFLKVN--TDLNDFELVKQLIREYRVAVIPGTTFG-MKNGCYLRIAYGA-LQKATAKEGIERLVQGLKT 385 (389)
T ss_pred cccCC-CeeEEEEEeCC--CCCChHHHHHHHHHHCCEEEccchhhC-CCCCCEEEEEEec-CCHHHHHHHHHHHHHHHHh
Confidence 23333 3344 445553 2467889999987 5899875432211 1224589999964 3455565555555544433
No 91
>PRK08363 alanine aminotransferase; Validated
Probab=99.93 E-value=1e-22 Score=206.49 Aligned_cols=351 Identities=13% Similarity=0.056 Sum_probs=229.5
Q ss_pred hcCCCCCcccccccC----CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASFVTT----WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
..+.+.++|+.+.+. ++++.+.+++.+++......|...++..++++.+.+++...+|...+ ...+++|+|++
T Consensus 27 ~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~---~~~i~it~G~~ 103 (398)
T PRK08363 27 KKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDIT---PDDVRVTAAVT 103 (398)
T ss_pred hcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCC---hhhEEEeCCHH
Confidence 345566777777763 34567888888777543334555668888888888888776675432 23589999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEE-eccCCccccCHHHHHHhhhhCCeEE
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEV-KLSEGYYVMDPVKAVEMVDENTICV 206 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v-~~~~~~~~~d~~~L~~~i~~~t~~v 206 (494)
+++.+++.++.. .++.|+++.++|..+...++..|+.++.+ +.+++++.+|+++|++++.+++++|
T Consensus 104 ~al~~~~~~~~~-------------~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v 170 (398)
T PRK08363 104 EALQLIFGALLD-------------PGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAI 170 (398)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEE
Confidence 999988776632 12689999999999999999999998888 5555557899999999998889999
Q ss_pred EEeeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc-ccccCCCceEEEEcCccc-CCc
Q 011057 207 AAILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE-WDFRLPLVKSINVSGHKY-GLV 281 (494)
Q Consensus 207 v~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~hK~-l~~ 281 (494)
++++++||||.+.+ +++|+++|+++ ++++++|++|+.+.. ..+... ..+....--.+..++.|+ +.+
T Consensus 171 ~l~~p~NPtG~~~~~~~~~~l~~~a~~~------~~~li~Deay~~~~~--~~~~~~~~~~~~~~~vi~~~SfSK~~~~~ 242 (398)
T PRK08363 171 AVINPNNPTGALYEKKTLKEILDIAGEH------DLPVISDEIYDLMTY--EGKHVSPGSLTKDVPVIVMNGLSKVYFAT 242 (398)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHc------CeEEEEhhhhhhhcc--CCcccCHHHcCcCCcEEEEecchhccCCc
Confidence 99999999999876 88899999999 999999999987532 111000 011111112334578897 678
Q ss_pred CCceEEEEEe-CCCCcccccccc-cCCCCCCCCCcccccCcchHHHHHHHHHHHHh--cHhHHHHHHHHHHHHHHHHHHH
Q 011057 282 YAGIGWVIWR-NKEDLPEELIFH-INYLGADQPTFTLNFSKGSSQVIAQYYQLIRL--GFEGYRNVMENCHENAMVLKEG 357 (494)
Q Consensus 282 p~g~G~~~~~-~~~~~~~~~~~~-~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l--~~~g~~~~~~~~~~~a~~l~~~ 357 (494)
+.++||+++. ++..+ ..+... ..+... .+ + .+.+.+.++...+ ..+.+++..+++.++++++.+.
T Consensus 243 GlRiG~~~~~~~~~~~-~~l~~~~~~~~~~-----~~-~----~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~ 311 (398)
T PRK08363 243 GWRLGYIYFVDPEGKL-AEVREAIDKLARI-----RL-C----PNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKR 311 (398)
T ss_pred cceEEEEEEeCcHHHH-HHHHHHHHHHhcc-----cc-c----CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 8899999873 32222 111100 000000 00 0 1122233333333 2455667777888889999999
Q ss_pred HhhCCCeEEeecCCCccEEEE-EecCCCCCCHHHHH-HHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHH
Q 011057 358 LEKTGRFNIVSKDEGVPLVAF-SLKDNKRHDEFEVA-ELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVL 435 (494)
Q Consensus 358 L~~~~~~~~~~~~~~~~~v~f-~~~~~~~~~~~~l~-~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~ 435 (494)
|++++++++..+ ..+++.| .+++....+..+++ +.|.++|+.+....... ..+..++|+++.. +.++++..++
T Consensus 312 L~~~~~~~~~~p--~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~-~~~~~~iRis~~~--~~~~l~~~l~ 386 (398)
T PRK08363 312 LNEIPGISTTKP--QGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFG-EYGAGHFRLVFLP--PVEILEEAMD 386 (398)
T ss_pred HhcCCCCEecCC--CeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCeEEEEecC--CHHHHHHHHH
Confidence 999876775433 4566666 55431112344554 55688999875433221 1234689999963 5666776666
Q ss_pred HHHHHHH
Q 011057 436 DITKVLH 442 (494)
Q Consensus 436 ~l~~~~~ 442 (494)
.|+++++
T Consensus 387 ~l~~~~~ 393 (398)
T PRK08363 387 RFEEFMR 393 (398)
T ss_pred HHHHHHH
Confidence 6665554
No 92
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.93 E-value=4.2e-24 Score=212.16 Aligned_cols=320 Identities=17% Similarity=0.039 Sum_probs=210.8
Q ss_pred cccccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 011057 61 ASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRK 140 (494)
Q Consensus 61 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~ 140 (494)
.+..+..++|.+.+++.++.... ..+... ...+++++++++++| +. .+++++||++++.+++.++..+
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~~~-~~~~~~----~~~~~l~~~~a~~~g-~~------~~~~~~~gt~a~~~~~~~l~~~ 70 (338)
T cd06502 3 RSDTVTGPTPEMLEAMAAANVGD-DVYGED----PTTAKLEARAAELFG-KE------AALFVPSGTAANQLALAAHTQP 70 (338)
T ss_pred ccccCCCCCHHHHHHHHhcccCC-cccCCC----HHHHHHHHHHHHHhC-CC------eEEEecCchHHHHHHHHHhcCC
Confidence 45556667788888887765322 122222 344567778999999 32 3888999999998877766321
Q ss_pred HHHHHHhcCCCCCCCeEEeCCCcchHHHH---HHHHcCCeeEEEeccCCccccCHHHHHHhhhh-------CCeEEEEee
Q 011057 141 WQNKRKAEGKPFDKPNIVTGANVQVCWEK---FARYFEVELKEVKLSEGYYVMDPVKAVEMVDE-------NTICVAAIL 210 (494)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~~~h~s~~~---~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-------~t~~vv~~~ 210 (494)
+++|+++.++|.++.. .+...|++++.++.+. +.+|+++|++++++ ++++|++++
T Consensus 71 -------------gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~ 135 (338)
T cd06502 71 -------------GGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN--GKLTPEDLEAAIRPRDDIHFPPPSLVSLEN 135 (338)
T ss_pred -------------CCeEEEecCcceeeecCCcHHHHcCceEEeecCCC--CcCCHHHHHHHhhccCCCcCCcceEEEEEe
Confidence 2689999999987553 3556899999998754 57999999999975 688999999
Q ss_pred CCCCccc--ccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEE
Q 011057 211 GSTLNGE--FEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV 288 (494)
Q Consensus 211 ~~~~tG~--~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~ 288 (494)
++|+.|. .+++++|+++|+++ ++++++|+||..+....... .......++|+++.++|||++.|. |++
T Consensus 136 p~n~g~~~~~~~l~~i~~~~~~~------~~~livDea~~~~~~~~~~~--~~~~~~~~~d~~~~s~sK~~~~~~--g~~ 205 (338)
T cd06502 136 TTEGGTVYPLDELKAISALAKEN------GLPLHLDGARLANAAAALGV--ALKTYKSGVDSVSFCLSKGGGAPV--GAV 205 (338)
T ss_pred ecCCccccCHHHHHHHHHHHHHc------CCeEeechHHHHHHHHhcCC--CHHHHHhcCCEEEEeccccCCCcc--ceE
Confidence 9997442 46788899999999 99999999986432110110 101011368899999999997664 334
Q ss_pred EEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEee
Q 011057 289 IWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVS 368 (494)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (494)
++.+++.+.........+. ++. ....+.+.+++..+...++.++.++..++++++.+.|++++ +.+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~- 272 (338)
T cd06502 206 VVGNRDFIARARRRRKQAG----------GGM-RQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELG-GLES- 272 (338)
T ss_pred EECCHHHHHHHHHHHHHhC----------CCh-hhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC-CCcc-
Confidence 4444433221111111110 010 12223445555556555667778889999999999999987 5433
Q ss_pred cCCCccEEEEEecCCCCCCHHHHHHHHH---hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHH
Q 011057 369 KDEGVPLVAFSLKDNKRHDEFEVAELLR---RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITK 439 (494)
Q Consensus 369 ~~~~~~~v~f~~~~~~~~~~~~l~~~L~---~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~ 439 (494)
++ ..+++.+..... ..-...+.+.|. ++|+.+... +..++|++++..++.++++++++.+++
T Consensus 273 ~~-~~~~~~v~~~~~-~~~~~~l~~~l~~~~~~gi~~~~~-------~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 273 EV-QTNIVLLDPVEA-NAVFVELSKEAIERRGEGVLFYAW-------GEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred cc-cCCeEEEecCCc-cHHHHHHHHHHHHhhhCCEEEEec-------CCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 22 578888876432 111234445554 678876432 115799999999999999988887754
No 93
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.93 E-value=4.9e-23 Score=205.23 Aligned_cols=316 Identities=14% Similarity=0.086 Sum_probs=214.3
Q ss_pred CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
.+++++.+++.++.+. . ....++.+++++++++++|.+. +++|+|+|+|+++++.++...
T Consensus 24 ~~~~~v~~a~~~~~~~-~------~~~~~~~~~~~~~~a~~~g~~~-------~~~~~g~t~al~~al~al~~~------ 83 (363)
T TIGR01437 24 TVSDEVADAQKRGAQN-Y------FEIKELVNKTGEYIANLLGVED-------AVIVSSASAGIAQSVAAVITR------ 83 (363)
T ss_pred CCCHHHHHHHHHHHhc-C------CCHHHHHHHHHHHHHHhhCCCe-------EEEEcCHHHHHHHHHHHHhcC------
Confidence 4578899988888643 1 1345777889999999999864 799999999999998887432
Q ss_pred hcCC----------CCCCCeEEeCCCcchH----HHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEE-EeeC
Q 011057 147 AEGK----------PFDKPNIVTGANVQVC----WEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVA-AILG 211 (494)
Q Consensus 147 ~~g~----------~~~~~~vi~~~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv-~~~~ 211 (494)
|. ....++|+++.+.+.. +...+.+.|++++.++++ +.+|+++++++|+++|++++ ++++
T Consensus 84 --Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~---~~~d~~~le~ai~~~t~ai~~v~~~ 158 (363)
T TIGR01437 84 --GNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA---NECSAEQLEAAITEKTAAILYIKSH 158 (363)
T ss_pred --CCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC---CCCCHHHHHHhcChhceEEEEEecC
Confidence 21 0012378887743332 356778889999988863 46999999999999998766 4567
Q ss_pred CCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEe
Q 011057 212 STLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWR 291 (494)
Q Consensus 212 ~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~ 291 (494)
++++|.+.|+++|+++|+++ |+++++|+||+.. + . .....++|++++|+||++.+|. .|+++.+
T Consensus 159 ~~~~g~~~~~~~i~~~a~~~------gi~vivD~a~~~~---~--~----~~~~~g~D~~~~S~~K~l~gp~-~G~l~~~ 222 (363)
T TIGR01437 159 HCVQKSMLSVEDAAQVAQEH------NLPLIVDAAAEED---L--Q----KYYRLGADLVIYSGAKAIEGPT-SGLVLGK 222 (363)
T ss_pred CCCcCCcCCHHHHHHHHHHc------CCeEEEECCCCCc---h--H----HHHHcCCCEEEEeCCcccCCCc-eEEEEEc
Confidence 78999999999999999999 9999999999731 1 0 0111268999999999998776 7877653
Q ss_pred CCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC
Q 011057 292 NKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE 371 (494)
Q Consensus 292 ~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 371 (494)
+ ..+. .... . ..+.... +. .....++++.+++..+...+. +..+...++++++.++|.+++++++..+..
T Consensus 223 ~-~~i~-~~~~--~-~~~~~~~--~~--~~~~~~~gl~aAl~~~~~~~~-~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~ 292 (363)
T TIGR01437 223 K-KYIE-WVKL--Q-SKGIGRA--MK--VGKENILGLTAALEQYLSTGK-ESGAEMVAKLTPFIEALNTLKGVSASIVQD 292 (363)
T ss_pred H-HHHH-HHHh--c-cCCCcce--ec--cCHHHHHHHHHHHHHHHccCc-ccHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 3 2221 1111 0 0010000 00 111336777778877654443 333344456778999999998898875321
Q ss_pred C------ccEEEEEecCCCCCCHHHHHHHHHhcC--ceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 372 G------VPLVAFSLKDNKRHDEFEVAELLRRFG--WIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 372 ~------~~~v~f~~~~~~~~~~~~l~~~L~~~G--i~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
. ...+.|... ..+++..++.+.|.++| |..+.+. .....+|+.... ++++|++.+++.|+++
T Consensus 293 ~~~~~~~~~~v~~~~~-~~g~~~~~l~~~L~~~~~~I~~r~~~-----~~~~~~~l~~~~-~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 293 EAGRDIARAEIRFDES-ELGMTAADVVQALRQGEPAIYTRGYK-----ANEGIIEIDPRS-VTGGQLDIIVERIREI 362 (363)
T ss_pred CCCCcCceEEEEEecc-CCCCCHHHHHHHHhcCCCCEEEeeee-----ecCCeEEEEeec-CCHHHHHHHHHHHHHh
Confidence 1 122334432 13578899999999878 5544322 223457777763 6789999999888775
No 94
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.93 E-value=3.4e-23 Score=211.37 Aligned_cols=341 Identities=14% Similarity=0.052 Sum_probs=218.8
Q ss_pred CcccccccCCChHHHHHHHHHHhccc-CCCC------CCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHH
Q 011057 58 LNLASFVTTWMEPECDKLMMAAINKN-YVDM------DEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAI 130 (494)
Q Consensus 58 ~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~------~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~ 130 (494)
+++..... +++|.+.+++..++... .... ...+....+|+.+++++++++|.+. ..+ ++++||+|+
T Consensus 28 ~~l~~~~n-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~-----~~i-~~~sgt~al 100 (416)
T PRK00011 28 IELIASEN-FVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEY-----ANV-QPHSGSQAN 100 (416)
T ss_pred eeeecccC-cCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCc-----eee-ecCCchHHH
Confidence 44444333 35678888876665321 1111 1223455666667889999999975 223 334578888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH---H--HHHcCCeeEEEeccCCccccCHHHHHHhhhh-CCe
Q 011057 131 MLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK---F--ARYFEVELKEVKLSEGYYVMDPVKAVEMVDE-NTI 204 (494)
Q Consensus 131 ~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~---~--~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~ 204 (494)
..++.++.. .+++|+++.++|.++.. . ....|++++.++++++++.+|++++++++++ +|+
T Consensus 101 ~~~l~~l~~-------------~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k 167 (416)
T PRK00011 101 AAVYFALLK-------------PGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPK 167 (416)
T ss_pred HHHHHHhcC-------------CCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCC
Confidence 877666622 12689999988865321 1 1234677888888754478999999999975 688
Q ss_pred EEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCc
Q 011057 205 CVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAG 284 (494)
Q Consensus 205 ~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g 284 (494)
+|+++.. .+|...|+++|+++|+++ |+++++|+||+.+... .......+. ++|+++.++||++.+|.
T Consensus 168 ~v~~~~~--~~~~~~~~~~I~~la~~~------~~~livD~a~~~g~~~--~g~~~~~~~--~~di~~~S~~K~l~g~~- 234 (416)
T PRK00011 168 LIIAGAS--AYSRPIDFKRFREIADEV------GAYLMVDMAHIAGLVA--AGVHPSPVP--HADVVTTTTHKTLRGPR- 234 (416)
T ss_pred EEEECCC--cCCCccCHHHHHHHHHHc------CCEEEEECcchhcccc--cCccCCCCC--CCcEEEecCCcCCCCCC-
Confidence 7776543 456778999999999999 9999999999754321 111112222 68999999999986554
Q ss_pred eEEEEEeCCCCcccccc-cccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCC
Q 011057 285 IGWVIWRNKEDLPEELI-FHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGR 363 (494)
Q Consensus 285 ~G~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (494)
.|++++.++... ..+. ....+. .++.......++..++.....++++++.++..++++++++.|++++
T Consensus 235 gg~i~~~~~~~~-~~l~~~~~~~~---------~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g- 303 (416)
T PRK00011 235 GGLILTNDEELA-KKINSAVFPGI---------QGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERG- 303 (416)
T ss_pred ceEEEeCCHHHH-HHHHHHhCccc---------cCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 467766544332 2211 111111 0122223344444455444456678889999999999999999985
Q ss_pred eEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCC---CCCCceEEEEEecc----CCChHHHHHHHHH
Q 011057 364 FNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPA---DAQHITVLRVVIRE----DFSRTLAERLVLD 436 (494)
Q Consensus 364 ~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~---~~~~~~~lRvs~~~----~~t~~~id~~i~~ 436 (494)
+++.......+++.+.+.+ .+.+..++.+.|.++||.+.....|. .......+|++... .++.+|++++++.
T Consensus 304 ~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~ 382 (416)
T PRK00011 304 FRVVSGGTDNHLVLVDLRS-KGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAEL 382 (416)
T ss_pred CeeeecCCCCeEEEEeCcc-cCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHH
Confidence 8876422234777777643 23467789999999999986322121 11123458986533 4578999999999
Q ss_pred HHHHHHH
Q 011057 437 ITKVLHE 443 (494)
Q Consensus 437 l~~~~~~ 443 (494)
|++++..
T Consensus 383 l~~~~~~ 389 (416)
T PRK00011 383 IADVLDN 389 (416)
T ss_pred HHHHHhc
Confidence 9887664
No 95
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.93 E-value=6.7e-23 Score=207.75 Aligned_cols=359 Identities=17% Similarity=0.134 Sum_probs=227.5
Q ss_pred HHHHHHHHHhhhhcCCCCCcccccccCCChHHHHHHHHHHh-cccCCCCC------CChhhHHHHHHHHHHHHHHhCCCC
Q 011057 40 EAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAI-NKNYVDMD------EYPVTTELQNRCVNIIARLFNAPL 112 (494)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~------~~~~~~~le~~~~~~la~l~g~~~ 112 (494)
.++...+++..... +..+|+..-. .+.+|.+.+++...+ +....++. ..+...++|+.+.+.+++++|.+.
T Consensus 14 ~~~~~~~~~~~~~~-~~~~~l~~se-n~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~ 91 (416)
T PRK13034 14 DEVFAAINKELERQ-QDHLELIASE-NFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDY 91 (416)
T ss_pred HHHHHHHHHHHHHH-hcCeeecccc-cCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCc
Confidence 45555655544332 2233332211 134788888888775 44332222 235566777656669999999974
Q ss_pred CCCCCcce-eeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchH-HHHHHHH--cCCee--EEEeccCC
Q 011057 113 EDSETAVG-VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVC-WEKFARY--FEVEL--KEVKLSEG 186 (494)
Q Consensus 113 ~~~~~~~~-~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s-~~~~~~~--~G~~v--~~v~~~~~ 186 (494)
+ +++++|+.||..++.++.. .+++|++++..|.+ +...++. .+..+ ..++++..
T Consensus 92 -------alv~~~SG~~A~~~~l~al~~-------------~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 151 (416)
T PRK13034 92 -------ANVQPHSGSQANGAVYLALLK-------------PGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL 151 (416)
T ss_pred -------eEEecCCcHHHHHHHHHHhcC-------------CCCEEEEcCccceeeeecCCcceeccceeeeEEcccccc
Confidence 5 4568999999988877732 13689999999976 3322222 12222 34555544
Q ss_pred ccccCHHHHHHhhhh-CCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccC
Q 011057 187 YYVMDPVKAVEMVDE-NTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL 265 (494)
Q Consensus 187 ~~~~d~~~L~~~i~~-~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~ 265 (494)
++.+|++++++.+.. ++++|++..+ .+|...|+++|.++|+++ |++++||+||+.|... .+.... ..
T Consensus 152 ~~~~d~~~le~~l~~~~~klVi~~~~--~~g~~~dl~~l~~la~~~------g~~livD~Aha~G~~~--~g~~~~--~~ 219 (416)
T PRK13034 152 TGLIDYDEVEELAKEHKPKLIIAGFS--AYPRELDFARFREIADEV------GALLMVDMAHIAGLVA--AGEHPN--PF 219 (416)
T ss_pred cCCcCHHHHHHHHhhcCCeEEEECCC--ccccccCHHHHHHHHHHc------CCEEEEeCcccccCcc--cCCCCC--CC
Confidence 467999999998854 5676655443 357888999999999999 9999999999987642 221111 12
Q ss_pred CCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHH
Q 011057 266 PLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVME 345 (494)
Q Consensus 266 ~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~ 345 (494)
..+|++++++|||+.+|.| |+++.+++... ..+.. ..|.+ +.........+++..++...-..+..++.+
T Consensus 220 ~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~-~~~~~-~~~~~-------~~~~~~~~~~aa~~~al~~~~~~~~~~~~~ 289 (416)
T PRK13034 220 PHAHVVTTTTHKTLRGPRG-GMILTNDEEIA-KKINS-AVFPG-------LQGGPLMHVIAAKAVAFGEALQPEFKTYAK 289 (416)
T ss_pred CCceEEEEeCcccCCCCCC-eEEEECcHHHH-HHHHh-hcCCc-------ccCCccHHHHHHHHHHHHHHhChhHHHHHH
Confidence 4699999999999987776 55555443221 11110 01111 001122223333333333322223346678
Q ss_pred HHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCC---CCCceEEEEEec
Q 011057 346 NCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPAD---AQHITVLRVVIR 422 (494)
Q Consensus 346 ~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~---~~~~~~lRvs~~ 422 (494)
+.++++++|+++|++.| +++..+....+++.+.+.. .+.+...+.++|.++||.+.....|.. +.....+|++++
T Consensus 290 ~l~~~a~~l~~~L~~~G-~~~~~~~~~t~i~~v~~~~-~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~ 367 (416)
T PRK13034 290 QVIANAQALAEVLKERG-YDLVSGGTDNHLLLVDLRP-KGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTP 367 (416)
T ss_pred HHHHHHHHHHHHHHHcC-CEeccCCCCCcEEEEEcCC-CCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcH
Confidence 99999999999999985 8887532246777777643 345667788999999999865332221 111446999988
Q ss_pred c----CCChHHHHHHHHHHHHHHHHH
Q 011057 423 E----DFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 423 ~----~~t~~~id~~i~~l~~~~~~l 444 (494)
. .++.+|++++++.|++++...
T Consensus 368 ~~t~~~~~~~di~~l~~~l~~~~~~~ 393 (416)
T PRK13034 368 AGTTRGFGEAEFREIANWILDVLDDL 393 (416)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHhcC
Confidence 7 777999999999999987743
No 96
>PRK08960 hypothetical protein; Provisional
Probab=99.92 E-value=1.2e-22 Score=205.25 Aligned_cols=341 Identities=15% Similarity=0.084 Sum_probs=222.5
Q ss_pred CCCCcccccccCC-ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHH
Q 011057 55 NPRLNLASFVTTW-MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLA 133 (494)
Q Consensus 55 ~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a 133 (494)
.+.++|..+.+++ +++.+.+++.+++..+...|...++..++++.+.+++.+.+|.+.+ ...+++|+|+++++.++
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~---~~~i~it~G~~~al~~~ 108 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVD---PERILVTPGGSGALLLA 108 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCC---hhhEEEccCcHHHHHHH
Confidence 3445566666653 4667888888887654455666678888888888888877776542 24589999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCC-ccccCHHHHHHhhhhCCeEEEEeeCC
Q 011057 134 GLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEG-YYVMDPVKAVEMVDENTICVAAILGS 212 (494)
Q Consensus 134 ~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~t~~vv~~~~~ 212 (494)
+.+... .+++|++++++|..+...++..|.+++.++++.+ ++.+|+++++++++++++++++++|+
T Consensus 109 ~~~~~~-------------~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~ 175 (387)
T PRK08960 109 SSLLVD-------------PGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPA 175 (387)
T ss_pred HHHhcC-------------CCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCC
Confidence 776632 1368999999999999999999999999998753 46799999999999889999999999
Q ss_pred CCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccC-CcCCceEEE
Q 011057 213 TLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG-LVYAGIGWV 288 (494)
Q Consensus 213 ~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l-~~p~g~G~~ 288 (494)
||||.+.+ +++|+++|+++ ++++++|++|..+.. ..+ ....+....-.++..+++|.+ .++.++|++
T Consensus 176 NPtG~~~~~~~~~~l~~~~~~~------~~~li~De~Y~~~~~--~~~-~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~ 246 (387)
T PRK08960 176 NPTGTLLSRDELAALSQALRAR------GGHLVVDEIYHGLTY--GVD-AASVLEVDDDAFVLNSFSKYFGMTGWRLGWL 246 (387)
T ss_pred CCCCcCcCHHHHHHHHHHHHHc------CCEEEEEcccccccc--CCC-CCChhhccCCEEEEeecccccCCcccEEEEE
Confidence 99999976 45677778999 999999999987532 111 111111222234556888977 577789999
Q ss_pred EEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc---HhHHHHHHHHHHHHHHHHHHHHhhCCCeE
Q 011057 289 IWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG---FEGYRNVMENCHENAMVLKEGLEKTGRFN 365 (494)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (494)
+..+. .+ ..+.....+. . .. .+.+.+.++...+. ...+.+..+.+.+.++.+.+.|++.+ +.
T Consensus 247 ~~~~~-~~-~~~~~~~~~~-------~--~~---~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~-~~ 311 (387)
T PRK08960 247 VAPPA-AV-PELEKLAQNL-------Y--IS---ASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELG-FG 311 (387)
T ss_pred EcCHH-HH-HHHHHHHhhh-------c--cC---CCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcC-Cc
Confidence 87542 22 1111100100 0 00 11223333333332 23445566667778888999999875 65
Q ss_pred EeecCCCccEEEEEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 366 IVSKDEGVPLVAFSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 366 ~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
+...+....++.+.++. ...+..+++++|. ++|+.+.............++|++++. +. +++.++++.+.
T Consensus 312 ~~~~p~g~~f~~~~~~~-~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~--~~---~~l~~al~~l~ 382 (387)
T PRK08960 312 IAVEPQGAFYLYADISA-FGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ--SL---PRLQEAVERIA 382 (387)
T ss_pred CCcCCCeeEEEEEeccc-cCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC--CH---HHHHHHHHHHH
Confidence 43333233444555532 1246778888865 679987543222211234589999984 33 34444444443
No 97
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.92 E-value=2.1e-22 Score=204.51 Aligned_cols=368 Identities=13% Similarity=0.056 Sum_probs=237.3
Q ss_pred HHHHHHHHHHhhhhc-CCCCCcccccccC-----CChHHHHHHHHHHhcccC-CCCCCChhhHHHHHHHHHHHHHHhCCC
Q 011057 39 KEAAYQIINDELMLD-GNPRLNLASFVTT-----WMEPECDKLMMAAINKNY-VDMDEYPVTTELQNRCVNIIARLFNAP 111 (494)
Q Consensus 39 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~ 111 (494)
..+....+++.+..+ +.+.++|+.+.+. .+++.+.+++.++++... ..|....+..++++.+.+++.+..|.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~ 94 (409)
T PLN00143 15 IDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQ 94 (409)
T ss_pred HHHHHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence 444455555544333 3444677777665 455678888888877542 346566688888888888887776664
Q ss_pred CCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEecc-CCcccc
Q 011057 112 LEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS-EGYYVM 190 (494)
Q Consensus 112 ~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~ 190 (494)
.+ ...+++|+|+++++.+++.++.+. ++.|+++.++|..+...++..|++++.++++ ++++.+
T Consensus 95 ~~---~~~I~it~G~~~al~~~~~~l~~~-------------gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 158 (409)
T PLN00143 95 LS---PDDVYLTLGCKHAAEIIIKVLARP-------------EANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEV 158 (409)
T ss_pred CC---HhhEEEecChHHHHHHHHHHHcCC-------------CCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcC
Confidence 42 245899999999999888877431 2689999999999999999999999999985 345789
Q ss_pred CHHHHHHhhhhCCeEEEEeeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCc-cc-cccc-
Q 011057 191 DPVKAVEMVDENTICVAAILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPE-LE-WDFR- 264 (494)
Q Consensus 191 d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~-~~~~- 264 (494)
|+++|++++.++++++++++|+||||.+.+ +++|.++|+++ ++++++|++|..+.. .... .. ..+.
T Consensus 159 d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~l~~--~~~~~~~~~~~~~ 230 (409)
T PLN00143 159 DLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKL------GILVIADEVYGHIVF--GSKPFVPMGLFAS 230 (409)
T ss_pred CHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHc------CCeEEEEcccccccc--CCCCCcchhhhcc
Confidence 999999999888999999999999999976 67788889999 999999999987542 1110 00 0111
Q ss_pred CCCceEEEEcCccc-CCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc---HhHH
Q 011057 265 LPLVKSINVSGHKY-GLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG---FEGY 340 (494)
Q Consensus 265 ~~~~D~~~~~~hK~-l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~---~~g~ 340 (494)
...+ ++..++.|. ++++.++||++..++..+.........+..... ... . .+.+.+.++..++. ...+
T Consensus 231 ~~~v-i~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~-~~~--~----~~~~~q~a~~~~l~~~~~~~~ 302 (409)
T PLN00143 231 IVPV-ITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALN-PAP--F----PPTFIQAAIPEILEKTTEDFF 302 (409)
T ss_pred cCcE-EEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHh-ccC--C----CCchHHHHHHHHHhcChHHHH
Confidence 1122 445577786 888899999988544222111000000000000 000 0 11233444444443 3456
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCC--CCC-CHHHHHH-HHHhcCceeeccccCCCCCCceE
Q 011057 341 RNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDN--KRH-DEFEVAE-LLRRFGWIVPAYTMPADAQHITV 416 (494)
Q Consensus 341 ~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~--~~~-~~~~l~~-~L~~~Gi~v~~~~~~~~~~~~~~ 416 (494)
++..++..+..+++.+.|++++.......+....++.++++.. .++ +..+++. .+.++|+.+...... ....+
T Consensus 303 ~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f---~~~~~ 379 (409)
T PLN00143 303 SKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTV---GLKNW 379 (409)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCcccc---CCCCe
Confidence 7778888888888999998876433233332445666666421 112 4556665 457889987543322 22467
Q ss_pred EEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 417 LRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 417 lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
+|++++. +.++++..++.|+++++.
T Consensus 380 iRi~~~~--~~~~l~~al~rl~~~l~~ 404 (409)
T PLN00143 380 LRITFAV--EQSSLEDGLGRLKSFCGR 404 (409)
T ss_pred EEEEEcC--CHHHHHHHHHHHHHHHHH
Confidence 9999973 456666555555555543
No 98
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.92 E-value=1.4e-23 Score=208.36 Aligned_cols=330 Identities=15% Similarity=0.056 Sum_probs=223.2
Q ss_pred CChHHHHHHHHHHhcc----cCCCC---CCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecC-hhHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINK----NYVDM---DEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVG-SSEAIMLAGLAFK 138 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~----~~~~~---~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g-gt~a~~~a~~a~~ 138 (494)
..++.+.+++...+.. ..+.+ ...+.+.++.+++++.+++++|.+.+ ..+++++| |+.++-.++..+.
T Consensus 13 ~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~----~~v~~~~gsgt~~~Ea~~~nl~ 88 (360)
T PRK05355 13 MLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDN----YKVLFLQGGASLQFAMVPMNLL 88 (360)
T ss_pred CCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC----cEEEEEcCCchHHHHHHHHhcC
Confidence 3467788888776521 12222 23445668889999999999998531 33666655 5555555555442
Q ss_pred HHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHH-hhhhCCeEEEEeeCCCCccc
Q 011057 139 RKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVE-MVDENTICVAAILGSTLNGE 217 (494)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~-~i~~~t~~vv~~~~~~~tG~ 217 (494)
.+ |. ....|+.....| .+.+.++..|.. ..+..++..+..+..++++ ++++++++|.+++..|.||.
T Consensus 89 ~~--------g~--~~l~i~~G~fg~-r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv 156 (360)
T PRK05355 89 GG--------GK--KADYVDTGSWSK-KAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGT 156 (360)
T ss_pred CC--------CC--eEEEEECCHHHH-HHHHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceE
Confidence 21 10 001233333344 456778888965 6666653223455555555 77778999999999999999
Q ss_pred cc-CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCc
Q 011057 218 FE-DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDL 296 (494)
Q Consensus 218 ~~-~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~ 296 (494)
+. |+++| + +++++||++++.+..++ ++ ...|++.+++||++ +|+|+|+++++++..-
T Consensus 157 ~~~~i~~i------~------g~l~vVDavss~g~~~i-------dv--~~~d~~~~ssqK~l-gP~Glg~l~~s~~~l~ 214 (360)
T PRK05355 157 EFHELPDT------G------DVPLVADMSSDILSRPI-------DV--SKFGLIYAGAQKNI-GPAGLTIVIVREDLLG 214 (360)
T ss_pred ecCccccc------C------CCcEEEEcCccccCccC-------CH--HHccEEEEeccccc-cCCceEEEEECHHHHh
Confidence 97 77776 7 99999999999876544 22 24579999999987 5999999999875321
Q ss_pred ccccccccCCCCCC--CCCcccccCcchHHHHHHHHHHHHhcHh-HHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC-CC
Q 011057 297 PEELIFHINYLGAD--QPTFTLNFSKGSSQVIAQYYQLIRLGFE-GYRNVMENCHENAMVLKEGLEKTGRFNIVSKD-EG 372 (494)
Q Consensus 297 ~~~~~~~~~y~~~~--~~~~~~~~s~~~~~~~a~~~al~~l~~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~ 372 (494)
...+....|.... .......+|++...+.++.++|+.+..+ |++++.++..+++++++++|++++.+..+.++ .+
T Consensus 215 -~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~r 293 (360)
T PRK05355 215 -RALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDR 293 (360)
T ss_pred -hcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhc
Confidence 1111011111100 0111233788888899999999999988 89999999999999999999999833333221 13
Q ss_pred c-cEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 373 V-PLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 373 ~-~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
. .+++|++++. ....++.+.+.++|+++.... ...+.+|+|+..++|.+|||+|++.|++++.
T Consensus 294 s~~v~sf~~~~~--~~~~~~~~~~~~~Gi~~~~~~-----~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 294 SRMNVPFTLADE--ELDKKFLAEAKAAGLVGLKGH-----RSVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred CCcEEEEEcCCh--HHHHHHHHHHHHCCCcccCCC-----CccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 4 5788987542 334567788889999852211 1135799999999999999999999998664
No 99
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.92 E-value=8.4e-23 Score=200.78 Aligned_cols=315 Identities=19% Similarity=0.170 Sum_probs=229.1
Q ss_pred ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhC-CCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFN-APLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
++|.+.+++...+.. +..||.. -..++++.+++++| .+. ..+++++|++|.+...+++...+
T Consensus 36 p~~~~~~~~~~~~~~----~~rYPd~--~~~~l~~a~a~~~~~~~~-----~~V~~gnGsde~i~~l~~~~~~~------ 98 (356)
T COG0079 36 PPPKVIEAIRAALDK----LNRYPDP--DYRELRAALAEYYGVVDP-----ENVLVGNGSDELIELLVRAFVEP------ 98 (356)
T ss_pred CCHHHHHHHHHHHHh----hccCCCC--cHHHHHHHHHHHhCCCCc-----ceEEEcCChHHHHHHHHHHhhcC------
Confidence 457788888777652 2233322 12345666999999 543 35888999999999888888542
Q ss_pred hcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHH
Q 011057 147 AEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLND 226 (494)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~ 226 (494)
++.|+++.+++..+...++..|++++.++.++ +.+|++.+.+.+.+++++|++++||||||...+.++|.+
T Consensus 99 -------gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~--~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~ 169 (356)
T COG0079 99 -------GDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE--FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRA 169 (356)
T ss_pred -------CCEEEEcCCChHHHHHHHHhcCCeEEEecccc--cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 25899999999999999999999999999876 789999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcc-cCCcCCceEEEEEeCCCCcccccccccC
Q 011057 227 LLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHK-YGLVYAGIGWVIWRNKEDLPEELIFHIN 305 (494)
Q Consensus 227 la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK-~l~~p~g~G~~~~~~~~~~~~~~~~~~~ 305 (494)
++...++ +.+++||+||..|.-+ +.........++-++- ++.| +++++.++|+++. ++..+........+
T Consensus 170 l~~~~~~----~~~vVvDEAY~eF~~~---~~~~l~~~~~nlivlR-TfSKa~gLAGlRlGy~ia-~~~~i~~l~~vr~p 240 (356)
T COG0079 170 LLEALPE----GGLVVIDEAYIEFSPE---SSLELLKYPPNLIVLR-TFSKAFGLAGLRVGYAIA-NPELIAALNKVRPP 240 (356)
T ss_pred HHHhCCC----CcEEEEeCchhhcCCc---hhhhhccCCCCEEEEE-ecHHhhhcchhceeeccC-CHHHHHHHHHhcCC
Confidence 9998632 6799999999987531 1011000111233333 5557 7789999999654 44333222222233
Q ss_pred CCCCCCCCcccccCcchHHHHHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecCCCccEEEEEecCC
Q 011057 306 YLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKDEGVPLVAFSLKDN 383 (494)
Q Consensus 306 y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~~~~~~v~f~~~~~ 383 (494)
|. .+..++.++...+.. +.+++..++..+.+.++.+.|++++ +. +... ..|++.+++..
T Consensus 241 ~~---------------v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS--~aNFvlv~~~~- 301 (356)
T COG0079 241 FN---------------VSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPS--QANFVLVRVPD- 301 (356)
T ss_pred CC---------------CCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCC--CCcEEEEECCC-
Confidence 32 233445555554433 4567788888899999999999998 65 5433 58999999854
Q ss_pred CCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 384 KRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 384 ~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
.. ...+.+.|.++||+++.+..+ .....++||+++ |+++.++|+++|+++++.
T Consensus 302 -~~-~~~l~~~L~~~giivR~~~~~--~~~~~~lRitvg---t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 302 -AE-AAALAEALLKKGILVRDCSSV--GLLPGYLRITVG---TPEENDRLLAALREVLKG 354 (356)
T ss_pred -cc-HHHHHHHHHHCCEEEEeCCCC--CCCCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 23 568999999999999876442 234568999999 889999999999988754
No 100
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.92 E-value=3.6e-23 Score=206.06 Aligned_cols=321 Identities=18% Similarity=0.136 Sum_probs=218.2
Q ss_pred Ccccccc-cCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHH
Q 011057 58 LNLASFV-TTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLA 136 (494)
Q Consensus 58 ~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a 136 (494)
++|..+. +.+++|.+.+++.+++.. ...|.. +.. .++++.+++++|+++ ..+++|+|+++++..++.+
T Consensus 22 i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~y~~-~~~----~~lr~~ia~~~~~~~-----~~i~~~~G~~~~l~~~~~~ 90 (346)
T TIGR01141 22 IKLNSNENPFGPPPKAKEALRAEADK-LHRYPD-PDP----AELKQALADYYGVDP-----EQILLGNGSDEIIELLIRA 90 (346)
T ss_pred EEccCCCCCCCCCHHHHHHHHHhHHH-hhcCCC-CCH----HHHHHHHHHHhCcCh-----HHEEEcCCHHHHHHHHHHH
Confidence 3444433 334567788888877642 223322 222 246677899999764 3588999999998777666
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcc
Q 011057 137 FKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNG 216 (494)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG 216 (494)
+.. .+++|+++.+.|..+...++..|++++.++++++ +.+|++++++++.+++++|++++++||||
T Consensus 91 l~~-------------~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~~~~~~~~v~l~~p~NptG 156 (346)
T TIGR01141 91 FLE-------------PGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED-GQLDLEDILVAIDDKPKLVFLCSPNNPTG 156 (346)
T ss_pred hcC-------------CCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC-CCCCHHHHHHhcCCCCCEEEEeCCCCCCC
Confidence 522 1268999999998888888999999999999775 78999999999888899999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccC-CcCCceEEEEEeCCCC
Q 011057 217 EFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG-LVYAGIGWVIWRNKED 295 (494)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l-~~p~g~G~~~~~~~~~ 295 (494)
.+.|++++.++|+.+.+ ++++++|++|+.+.. . ............+++..+++|++ .++.++|+++++.. .
T Consensus 157 ~~~~~~~~~~l~~~~~~----~~~ii~D~~y~~~~~--~-~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~-~ 228 (346)
T TIGR01141 157 NLLSRSDIEAVLERTPE----DALVVVDEAYGEFSG--E-PSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAE-I 228 (346)
T ss_pred CCCCHHHHHHHHHhCCC----CcEEEEECchhhhcC--C-ccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHH-H
Confidence 99999999999987521 799999999985421 1 00000111112345667889998 45667899886432 2
Q ss_pred cccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHh-HHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCcc
Q 011057 296 LPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFE-GYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVP 374 (494)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 374 (494)
+ +.+..... .+ . .+.+.+.+++..+... .+++..++..++++++.+.|++++++++..+ ..+
T Consensus 229 ~-~~~~~~~~-------~~----~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~--~g~ 291 (346)
T TIGR01141 229 I-DALNKVRA-------PF----N---LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVYPS--DAN 291 (346)
T ss_pred H-HHHHhccC-------CC----C---CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEECCC--cCC
Confidence 2 21111100 00 1 1122344444444332 4667788888999999999999866875433 456
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHH
Q 011057 375 LVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
++.+.+.. +.+++.++|.++||.+......... ..++|++++ ++++++++++.|
T Consensus 292 ~~~~~~~~----~~~~~~~~L~~~gI~v~~g~~f~~~--~~~iRls~~---~~~~i~~~~~~l 345 (346)
T TIGR01141 292 FVLIRFPR----DADALFEALLEKGIIVRDLNSYPGL--PNCLRITVG---TREENDRFLAAL 345 (346)
T ss_pred EEEEecCC----CHHHHHHHHHHCCeEEEeCCCcCCC--CCeEEEecC---CHHHHHHHHHHh
Confidence 77777642 6789999999999987543321111 467999976 788888888765
No 101
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.92 E-value=8.6e-23 Score=206.87 Aligned_cols=347 Identities=13% Similarity=0.093 Sum_probs=232.9
Q ss_pred CCCCCcccccccCC-ChHHHHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhCCC-CCCCCCcceeeecChhHHH
Q 011057 54 GNPRLNLASFVTTW-MEPECDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFNAP-LEDSETAVGVGTVGSSEAI 130 (494)
Q Consensus 54 ~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~ggt~a~ 130 (494)
++..++|..+.+.. +++.+.+.+.+.+... ...|. .++...+++.+.+++.+.+|.+ .+. ...+++|+|+++++
T Consensus 43 ~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~--~~~I~it~Gs~~al 119 (410)
T PRK06290 43 DMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDP--VTEVIHSIGSKPAL 119 (410)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCC--cceEEEccCHHHHH
Confidence 34445666665554 3456777776655432 22243 2578888888888888877765 321 12488999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEe
Q 011057 131 MLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAI 209 (494)
Q Consensus 131 ~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~ 209 (494)
.+++.+.... ++.|+++.++|..+...++..|++++.+++++ +++.+|++++++++.+++++|+++
T Consensus 120 ~~~~~~~~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~ 186 (410)
T PRK06290 120 AMLPSCFINP-------------GDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLN 186 (410)
T ss_pred HHHHHHhCCC-------------CCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEE
Confidence 8877766321 26899999999999999999999999999975 347789999999998889999999
Q ss_pred eCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc-ccc-cCCCceEEEEcCcccC-CcCC
Q 011057 210 LGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE-WDF-RLPLVKSINVSGHKYG-LVYA 283 (494)
Q Consensus 210 ~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-~~~~~D~~~~~~hK~l-~~p~ 283 (494)
+|+||||.+.+ +++|.++|+++ +++|++|++|+.+.. ...... ..+ .....+++..++.|.+ +++.
T Consensus 187 nP~NPTG~v~s~e~l~~l~~la~~~------~~~iI~DEaY~~~~~--~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~Gl 258 (410)
T PRK06290 187 YPNNPTGAVATKEFYEEVVDFAKEN------NIIVVQDAAYAALTF--DGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGW 258 (410)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHc------CeEEEEecchhhcee--CCCCcChhcCCCccccEEEEeechhhcCCchh
Confidence 99999999977 57788889999 999999999987532 111000 011 1123457777888987 6788
Q ss_pred ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhhCC
Q 011057 284 GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEKTG 362 (494)
Q Consensus 284 g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~~~ 362 (494)
++|+++... ..+ ..+.....+... ....+.+.++...+.. +-+++..++..++++++.+.|++.+
T Consensus 259 RiG~ii~~~-~l~-~~l~~~~~~~~~------------~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g 324 (410)
T PRK06290 259 RLAFVVGNE-LIV-KAFATVKDNNDS------------GQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEVG 324 (410)
T ss_pred heEeEEeCH-HHH-HHHHHHHhcccc------------CCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 899988633 222 211111111100 0112334444444432 2345667777888899999999985
Q ss_pred CeEEeecCCCccEEEE-EecCCC-----CCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEec-cCCChHHHHHHHH
Q 011057 363 RFNIVSKDEGVPLVAF-SLKDNK-----RHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIR-EDFSRTLAERLVL 435 (494)
Q Consensus 363 ~~~~~~~~~~~~~v~f-~~~~~~-----~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~-~~~t~~~id~~i~ 435 (494)
+.+..+ ..+++.| .+++.. ..+..+++++|.++|+++. .|.... ..++|++++ ...++++.+++++
T Consensus 325 -~~~~~p--~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~---~p~~~~-~~~lRi~~~~~~~~~~~~~~~~~ 397 (410)
T PRK06290 325 -FKAEMP--GGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLIST---VPWDDA-GHFLRFSVTFEAKDEEEEDRILE 397 (410)
T ss_pred -CeecCC--CeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEE---ECCccc-cCeEEEEEEcccccccchhHHHH
Confidence 776543 3566654 554311 1367889999999987642 232212 247999996 3457788999999
Q ss_pred HHHHHHHHHh
Q 011057 436 DITKVLHELD 445 (494)
Q Consensus 436 ~l~~~~~~l~ 445 (494)
+|++.+..+.
T Consensus 398 ~l~~~~~~~~ 407 (410)
T PRK06290 398 EIKRRLSDVE 407 (410)
T ss_pred HHHHHHhhcc
Confidence 9998887653
No 102
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.92 E-value=3.1e-23 Score=204.96 Aligned_cols=324 Identities=15% Similarity=0.083 Sum_probs=224.9
Q ss_pred hHHHHHHHHHHhcc----cCCCCC---CChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecC-hhHHHHHHHHHHHHH
Q 011057 69 EPECDKLMMAAINK----NYVDMD---EYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVG-SSEAIMLAGLAFKRK 140 (494)
Q Consensus 69 ~p~~~~~~~~~~~~----~~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g-gt~a~~~a~~a~~~~ 140 (494)
+..+.+++.+.+.+ ....+. ..+.+.++.+++++.|++++|.+.+ ..+++++| ||+|+..++.....+
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~----~~v~~~~gsgT~a~ea~~~nl~~~ 79 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDN----YEVLFLQGGATGQFAAVPLNLLAE 79 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCCchHHHHHHHHhcCCC
Confidence 33566666666553 122222 2345668888999999999998532 34777766 999998887776321
Q ss_pred HHHHHHhcCCCCCCCeEE---eCCCcchHHHHHHHHcCCeeEEEeccCC---ccccCHHHHHHhhhhCCeEEEEeeCCCC
Q 011057 141 WQNKRKAEGKPFDKPNIV---TGANVQVCWEKFARYFEVELKEVKLSEG---YYVMDPVKAVEMVDENTICVAAILGSTL 214 (494)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi---~~~~~h~s~~~~~~~~G~~v~~v~~~~~---~~~~d~~~L~~~i~~~t~~vv~~~~~~~ 214 (494)
.++++ ....+| .+.+.|+..|+ +..+..++. .-.+|+++++ +++++++|.+++..|.
T Consensus 80 -------------~~~~l~i~~G~fg~-r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETs 142 (349)
T TIGR01364 80 -------------GKVADYIVTGAWSK-KAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETI 142 (349)
T ss_pred -------------CCeEEEEECCHHHH-HHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCc
Confidence 12332 233333 45778888999 888776421 1246666555 3467899999999999
Q ss_pred cccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCC
Q 011057 215 NGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 294 (494)
Q Consensus 215 tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~ 294 (494)
||...| ++++.+ +++++||++++.+..++ ++ ...|++.+++||+++ |+|+|+++++++.
T Consensus 143 tGv~~~-----~l~~~~------~~l~iVDavss~g~~~i-------d~--~~~d~~~~ssqK~lg-P~Glg~l~~s~~~ 201 (349)
T TIGR01364 143 HGVEFR-----ELPDVK------NAPLVADMSSNILSRPI-------DV--SKFGLIYAGAQKNIG-PAGLTVVIVRKDL 201 (349)
T ss_pred ccEecc-----eecccC------CCeEEEEccccccCccC-------CH--HHccEEEEecccccC-CCceEEEEECHHH
Confidence 999876 677778 99999999999876544 22 246799999999975 9999999998753
Q ss_pred CcccccccccCCCCCC--CCCcccccCcchHHHHHHHHHHHHhcHh-HHHHHHHHHHHHHHHHHHHHhhCCCeEEeec-C
Q 011057 295 DLPEELIFHINYLGAD--QPTFTLNFSKGSSQVIAQYYQLIRLGFE-GYRNVMENCHENAMVLKEGLEKTGRFNIVSK-D 370 (494)
Q Consensus 295 ~~~~~~~~~~~y~~~~--~~~~~~~~s~~~~~~~a~~~al~~l~~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~ 370 (494)
.. ...+....|.... .......+|++...++++.++|+.+..+ |++++.++..++++++++.|++++++..... +
T Consensus 202 ~~-~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~ 280 (349)
T TIGR01364 202 LG-RASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDP 280 (349)
T ss_pred Hh-hcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCH
Confidence 21 1111111221100 0011223688888899999999999988 7999999999999999999999977755532 1
Q ss_pred -CCc-cEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 371 -EGV-PLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 371 -~~~-~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
.+. .+++|.+++. .+ ..++.+.+.++|+++..... ..+++|+|+..++|.+|||+|+++|+++++
T Consensus 281 ~~rs~~v~sf~~~~~-~~-~~~~~~~~~~~Gi~~~~~~~-----~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 281 RNRSRMNVVFTLGNE-EL-EKRFLKEAEERGLVSLKGHR-----SVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred HHcCCeEEEEecCCh-hH-hHHHHHHHHHCCCcccCCcc-----ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 134 5688887542 22 25677788899995533211 124799999999999999999999998654
No 103
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.8e-22 Score=201.11 Aligned_cols=320 Identities=15% Similarity=0.090 Sum_probs=220.2
Q ss_pred ccccccC-CChHHHHHHHHHHhcccC-CCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHH
Q 011057 60 LASFVTT-WMEPECDKLMMAAINKNY-VDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAF 137 (494)
Q Consensus 60 ~~~~~~~-~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~ 137 (494)
|..+.++ ++++.+.+++.+++.... ..|. .+.. .++++.++++++.++ ..+++|+|+++++.+++.++
T Consensus 27 l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~-~~~~----~~lr~~ia~~~~~~~-----~~i~it~G~~~~l~~~~~~l 96 (351)
T PRK14807 27 MDANETPFELPEEVIKNIQEIVKSSQVNIYP-DPTA----EKLREELARYCSVVP-----TNIFVGNGSDEIIHLIMLAF 96 (351)
T ss_pred ccCCCCCCCCCHHHHHHHHHHhhcCcccCCC-CccH----HHHHHHHHHHhCCCc-----ccEEEecCHHHHHHHHHHHh
Confidence 3444444 345678888877765322 2222 2233 345666888888865 35889999999988777765
Q ss_pred HHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh-CCeEEEEeeCCCCcc
Q 011057 138 KRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAAILGSTLNG 216 (494)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~~~~~~tG 216 (494)
.+. +++|+++.+++..+...++..|++++.++++++ +.+|++++++++.+ ++++|++++++||||
T Consensus 97 ~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG 162 (351)
T PRK14807 97 INK-------------GDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKED-YTYDVGSFIKVIEKYQPKLVFLCNPNNPTG 162 (351)
T ss_pred cCC-------------CCEEEEeCCChHHHHHHHHHcCCeEEEeecCCC-CCCCHHHHHHHhhccCCCEEEEeCCCCCCC
Confidence 321 268999999999888889999999999998764 78999999999975 789999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccC-CcCCceEEEEEeCCCC
Q 011057 217 EFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG-LVYAGIGWVIWRNKED 295 (494)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l-~~p~g~G~~~~~~~~~ 295 (494)
.+.+.+++.++++++ +.++++|++|+.+.. ...........-.++..++.|.+ +++.++||++... ..
T Consensus 163 ~~~~~~~l~~l~~~~------~~~~ivDe~y~~~~~----~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~-~~ 231 (351)
T PRK14807 163 SVIEREDIIKIIEKS------RGIVVVDEAYFEFYG----NTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANE-NI 231 (351)
T ss_pred CCCCHHHHHHHHHhC------CCEEEEeCcchhhcc----cchHHHhhhCCCEEEEecchHhcccchhceeeeecCH-HH
Confidence 999999999999988 888999999976421 11100111111235566788987 4888999998532 22
Q ss_pred cccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccE
Q 011057 296 LPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPL 375 (494)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~ 375 (494)
+ ..+..... . . ..+.+.+.++..++....+++..+...++++++.+.|++++++++. ++ ..++
T Consensus 232 ~-~~~~~~~~-------~----~---~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~-~~~~ 294 (351)
T PRK14807 232 L-KYLNLVKS-------P----Y---NINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVY-PS-KTNF 294 (351)
T ss_pred H-HHHHHccC-------C----C---CcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cC-CccE
Confidence 2 22111100 0 0 0123445555666655556777777888888999999888777764 33 4566
Q ss_pred EEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 376 VAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 376 v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
+.+.+. +..++.+.|.++|+.+..+... .....++|++++ +.++.++|++.|++++
T Consensus 295 ~~i~~~-----~~~~~~~~l~~~gV~v~~~~~~--~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 295 ILVKFK-----DADYVYQGLLERGILVRDFSKV--EGLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred EEEEcC-----CHHHHHHHHHHCCEEEEECCCC--CCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 666653 4678999999999988654321 122457999987 5678889998887653
No 104
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.92 E-value=1.1e-23 Score=209.47 Aligned_cols=329 Identities=15% Similarity=0.040 Sum_probs=223.7
Q ss_pred ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeee-cChhHHHHHHHHHHHHHHHHHHH
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGT-VGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t-~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
.+|.+.+++......-..-...++...++.+++++.+++++|.+.+ ..++++ .+||.++..++......
T Consensus 14 ~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~----~~v~f~~gs~T~a~~~~~~~l~~~------ 83 (361)
T TIGR01366 14 VRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDG----YEVILGNGGATAFWDAATFGLIEK------ 83 (361)
T ss_pred CCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCC----ceEEEECCchhHHHHHHHHhcccc------
Confidence 3566666654221111111234567788888999999999999642 347776 45999998877665311
Q ss_pred hcCCCCCCCeEEeCCCcch-HHHHHHHHc--CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHH
Q 011057 147 AEGKPFDKPNIVTGANVQV-CWEKFARYF--EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKL 223 (494)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~-s~~~~~~~~--G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~ 223 (494)
..++++...|. .+...+.+. +.+++.++++++ ..++. .+.+++++|++++.+|.||.+.|+++
T Consensus 84 --------~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~lV~~~h~et~tG~~~pi~~ 149 (361)
T TIGR01366 84 --------KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPG-SAPEP-----QADPGVDVIAWAHNETSTGVAVPVRR 149 (361)
T ss_pred --------cccEEecCHHHHHHHHHHHhhhccCCceEEecCCC-CCCCC-----ccCCCCCEEEEcccCCccceeccccc
Confidence 23344444453 344445542 237788877653 23333 35678999999999999999999999
Q ss_pred HHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccc
Q 011057 224 LNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFH 303 (494)
Q Consensus 224 I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~ 303 (494)
| +|++ |++++||++++.+..++ ++. .+|++.+++|||+++|.|.++++++++.. .......
T Consensus 150 I---~~~~------g~~~iVDavqs~g~~~i-------dv~--~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~-~~~~~~~ 210 (361)
T TIGR01366 150 P---EGSD------DALVVIDATSGAGGLPV-------DIA--ETDVYYFAPQKNFASDGGLWLAIMSPAAL-ERIEAIA 210 (361)
T ss_pred c---cccC------CCeEEEEcCccccCCCC-------CHH--HCCEEEEEchhhcCCCCceEEEEECHHHH-hhhhccc
Confidence 8 4788 99999999999876543 332 48999999999999998888877776422 1110000
Q ss_pred ------cCCCCC-----CCCCcccccCcchHHHHHHHHHHHHhcHh-HHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC
Q 011057 304 ------INYLGA-----DQPTFTLNFSKGSSQVIAQYYQLIRLGFE-GYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE 371 (494)
Q Consensus 304 ------~~y~~~-----~~~~~~~~~s~~~~~~~a~~~al~~l~~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 371 (494)
+.|+.. ........++.+...++++.++++.+..+ |++.+.++..+++++++++|.+++.++++....
T Consensus 211 ~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~ 290 (361)
T TIGR01366 211 ASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDP 290 (361)
T ss_pred CCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCh
Confidence 011100 00001123566666677899999999887 699999999999999999999998666654321
Q ss_pred --Ccc-EEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 372 --GVP-LVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 372 --~~~-~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
..+ +.++.+. ++++..++.+.|.++||.+...... . +...+|++++.++|.+|+++|+++|+++++++
T Consensus 291 ~~~s~~v~~v~~~--~g~~~~~v~~~L~~~gI~i~~~~~~--l-~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 291 GKRSQVVGTIDFV--DDIDAATVAKILRANGIVDTEPYRK--L-GRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred hhcccceEEEECC--CccCHHHHHHHHHHCCCeeccCccc--c-CCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 222 2345552 4678899999999999987432111 1 24579999999999999999999999987653
No 105
>PRK09082 methionine aminotransferase; Validated
Probab=99.92 E-value=7.1e-23 Score=206.72 Aligned_cols=336 Identities=15% Similarity=0.081 Sum_probs=225.6
Q ss_pred CCcccccccCC-ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHH
Q 011057 57 RLNLASFVTTW-MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGL 135 (494)
Q Consensus 57 ~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~ 135 (494)
.++|+.+.+.. +++.+.+++.+++......|....+..++++.+.+++.+++|.+.+. ...+++|+|+++|+.+++.
T Consensus 32 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~--~~~i~~t~G~~~al~~~~~ 109 (386)
T PRK09082 32 AINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDA--DSEITVTAGATEALFAAIL 109 (386)
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCCHHHHHHHHHH
Confidence 34555554443 35678888887776544456666788999999999999999986421 1248899999999998877
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCc
Q 011057 136 AFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLN 215 (494)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~t 215 (494)
+.... +++|+++.++|..+..+++..|++++.++++++++.+|++++++++.+++++|++++++|||
T Consensus 110 ~~~~~-------------gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPt 176 (386)
T PRK09082 110 ALVRP-------------GDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPS 176 (386)
T ss_pred HHcCC-------------CCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCC
Confidence 66321 26899999999999999999999999999975457899999999998889999999999999
Q ss_pred ccc---cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc--ccc-cCCCceEEEEcCcccC-CcCCceEEE
Q 011057 216 GEF---EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE--WDF-RLPLVKSINVSGHKYG-LVYAGIGWV 288 (494)
Q Consensus 216 G~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~~~~~D~~~~~~hK~l-~~p~g~G~~ 288 (494)
|.+ +++++|.++|+++ ++++++|++|+.+.. ...... ..+ ....-.++..++.|.+ .++.++|++
T Consensus 177 G~~~~~~~~~~i~~~a~~~------~i~li~De~y~~~~~--~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~i 248 (386)
T PRK09082 177 GTVWSAADMRALWQLIAGT------DIYVLSDEVYEHIVF--DGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYC 248 (386)
T ss_pred CcCCCHHHHHHHHHHHHHC------CEEEEEehhhhhhcc--CCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhh
Confidence 987 6789999999999 999999999986542 111000 011 1123346667888987 577789998
Q ss_pred EEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh--cHhHHHHHHHHHHHHHHHHHHHHhhCCCeEE
Q 011057 289 IWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL--GFEGYRNVMENCHENAMVLKEGLEKTGRFNI 366 (494)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l--~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 366 (494)
+..+ ..+ ..+.....+.. .+ .+...+.++..++ ..+.+++..+.+.++++++.+.|++.+ +++
T Consensus 249 v~~~-~l~-~~~~~~~~~~~---------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~ 313 (386)
T PRK09082 249 VAPA-ALS-AEFRKVHQYNT---------FT---VNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSR-FKL 313 (386)
T ss_pred hCCH-HHH-HHHHHHHhhhc---------CC---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC-Ccc
Confidence 8643 222 11111111110 01 1122233333333 344456666777888899999999865 776
Q ss_pred eecCCCccE-EEEEecCCCCCCHHHHHHHH-HhcCceeecccc-CCCCCCceEEEEEeccCCChHHHHHHH
Q 011057 367 VSKDEGVPL-VAFSLKDNKRHDEFEVAELL-RRFGWIVPAYTM-PADAQHITVLRVVIREDFSRTLAERLV 434 (494)
Q Consensus 367 ~~~~~~~~~-v~f~~~~~~~~~~~~l~~~L-~~~Gi~v~~~~~-~~~~~~~~~lRvs~~~~~t~~~id~~i 434 (494)
..+ ..++ +.++++...+.+..++++.| .+.|+.+..... .....+..++|++++. .+++++..+
T Consensus 314 ~~~--~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~--~~~~l~~~~ 380 (386)
T PRK09082 314 LPC--EGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK--QEETLDAAA 380 (386)
T ss_pred cCC--CeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC--CHHHHHHHH
Confidence 543 3444 44566421245778899986 577998754432 1112345689999974 444444333
No 106
>PRK08912 hypothetical protein; Provisional
Probab=99.92 E-value=2.3e-22 Score=203.28 Aligned_cols=341 Identities=15% Similarity=0.075 Sum_probs=221.9
Q ss_pred CcccccccCCC-hHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHH
Q 011057 58 LNLASFVTTWM-EPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLA 136 (494)
Q Consensus 58 ~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a 136 (494)
++|..+.+..+ ++.+.+.+.+.+......|....+..++++.+.+++.+.+|.+.+.. ..+++|+|+++++.+++.+
T Consensus 29 i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~--~~i~~t~G~~~al~~~~~~ 106 (387)
T PRK08912 29 INLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPE--TEVMVTSGATEALAAALLA 106 (387)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCc--ccEEEeCCcHHHHHHHHHH
Confidence 45555544433 45566666666544334465556788999999999988888754211 1589999999999877766
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcc
Q 011057 137 FKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNG 216 (494)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG 216 (494)
... .+++|+++.++|..+...++..|++++.++++++++.+|+++|++.+.+++++|++++++||||
T Consensus 107 ~~~-------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG 173 (387)
T PRK08912 107 LVE-------------PGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAG 173 (387)
T ss_pred hcC-------------CCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCCcC
Confidence 532 1268999999999999999999999999999754578999999999988899999999999999
Q ss_pred cccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcc-c-ccc-cCCCceEEEEcCcccCC-cCCceEEEE
Q 011057 217 EFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPEL-E-WDF-RLPLVKSINVSGHKYGL-VYAGIGWVI 289 (494)
Q Consensus 217 ~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~-~~~~~D~~~~~~hK~l~-~p~g~G~~~ 289 (494)
.+.+ +++|.++|+++ ++++++|++|+.+.. ..... . ..+ +....+++..+++|.+. ++.++|+++
T Consensus 174 ~~~s~~~~~~i~~~~~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~ 245 (387)
T PRK08912 174 KVFPREELALLAEFCQRH------DAVAICDEVWEHVVF--DGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVC 245 (387)
T ss_pred cccCHHHHHHHHHHHHHC------CeEEEEhhhhhhccc--CCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEe
Confidence 9866 67799999999 999999999986532 11000 0 011 11235677889999875 667799998
Q ss_pred EeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh--cHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Q 011057 290 WRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL--GFEGYRNVMENCHENAMVLKEGLEKTGRFNIV 367 (494)
Q Consensus 290 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l--~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 367 (494)
+..+ .+ ..+....... . .+.+... +.++...+ ..+.+++..++..++++++.+.|++.+ +++.
T Consensus 246 ~~~~-~~-~~l~~~~~~~-------~--~~~~~~~---q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~ 310 (387)
T PRK08912 246 AAPP-LL-RVLAKAHQFL-------T--FTTPPNL---QAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIG-FPVL 310 (387)
T ss_pred cCHH-HH-HHHHHHHhhc-------c--ccCChHH---HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-Cccc
Confidence 7432 22 1111110000 0 0111111 22222222 133456677778888999999999985 7765
Q ss_pred ecCCCccEEEEEecC-CCCCCHHHHHHHHH-hcCceeeccccC-CCCCCceEEEEEeccCCChHHHHHHHHHHHH
Q 011057 368 SKDEGVPLVAFSLKD-NKRHDEFEVAELLR-RFGWIVPAYTMP-ADAQHITVLRVVIREDFSRTLAERLVLDITK 439 (494)
Q Consensus 368 ~~~~~~~~v~f~~~~-~~~~~~~~l~~~L~-~~Gi~v~~~~~~-~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~ 439 (494)
.+. ...++.+.++. ....+..++++.|. ++|+.+...... .......++|++++. ..++++..++.|++
T Consensus 311 ~~~-g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~--~~~~l~~~l~rl~~ 382 (387)
T PRK08912 311 PSQ-GTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK--RDATLDEAVERLAA 382 (387)
T ss_pred CCC-cceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC--CHHHHHHHHHHHHH
Confidence 442 23344456543 11246778999875 679987543221 111234689999985 34555444444433
No 107
>PLN02822 serine palmitoyltransferase
Probab=99.92 E-value=8e-23 Score=210.27 Aligned_cols=354 Identities=14% Similarity=0.056 Sum_probs=230.5
Q ss_pred hcCCCCCccccccc--CCChHHHHHHHHHHhcccCCCCCCC---hhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecCh
Q 011057 52 LDGNPRLNLASFVT--TWMEPECDKLMMAAINKNYVDMDEY---PVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGS 126 (494)
Q Consensus 52 ~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~gg 126 (494)
.+|+.+++|+++.+ ...+|.+.+++.++++....++..+ -+....+.++++.|++++|.+. .+++++|+
T Consensus 106 ~~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~------~i~~s~G~ 179 (481)
T PLN02822 106 INGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPD------SILYSYGL 179 (481)
T ss_pred ECCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCC------EEEECCHH
Confidence 35666667765432 2357889999999988754443332 2456677778888999999763 36666655
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhh--hCC
Q 011057 127 SEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVD--ENT 203 (494)
Q Consensus 127 t~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~--~~t 203 (494)
+ ++..++.++.. .++.|+++...|+++..++++.|.+++.++.++ +.+..+++++++... +++
T Consensus 180 ~-a~~sai~a~~~-------------~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~ 245 (481)
T PLN02822 180 S-TIFSVIPAFCK-------------KGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKL 245 (481)
T ss_pred H-HHHHHHHHhCC-------------CCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCC
Confidence 5 66655554422 135788999999999999999999999988653 112222233222211 234
Q ss_pred -eEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccC--CCceEEEEcCcccCC
Q 011057 204 -ICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL--PLVKSINVSGHKYGL 280 (494)
Q Consensus 204 -~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~~D~~~~~~hK~l~ 280 (494)
++|++..+.+++|.+.|+++|.++|++| ++++++|++|+.+++.-........+++ ..+|.++.++.|.+.
T Consensus 246 ~~~Ivve~i~~~~G~i~~L~~i~~l~~k~------~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg 319 (481)
T PLN02822 246 RRYIVVEAIYQNSGQIAPLDEIVRLKEKY------RFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALA 319 (481)
T ss_pred cEEEEEecCCCCCCCccCHHHHHHHHHHc------CCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhh
Confidence 6777777888899999999999999999 9999999999865431111111112222 367999999999874
Q ss_pred cCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhh
Q 011057 281 VYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEK 360 (494)
Q Consensus 281 ~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~ 360 (494)
. .| |+++.+ +..+ +.+. .....+++.++.++....+..++|+.+.. ..+..+++++++++|++.|++
T Consensus 320 ~-~G-G~i~g~-~~ii-~~~~-------~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~--~~~~~~~l~~~~~~l~~~L~~ 386 (481)
T PLN02822 320 T-EG-GFCTGS-ARVV-DHQR-------LSSSGYVFSASLPPYLASAAITAIDVLED--NPSVLAKLKENIALLHKGLSD 386 (481)
T ss_pred h-CC-eEEEcC-HHHH-HHHH-------hcCCceeeccccCHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHh
Confidence 3 33 666543 3222 2111 11112233333333444444456655432 256788899999999999999
Q ss_pred CCCeEEeecCCCccEEEEEecCCCCC---C---HHHHHHHHH-hcCceeeccccCCCCC--CceEEEEEeccCCChHHHH
Q 011057 361 TGRFNIVSKDEGVPLVAFSLKDNKRH---D---EFEVAELLR-RFGWIVPAYTMPADAQ--HITVLRVVIREDFSRTLAE 431 (494)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~~~~---~---~~~l~~~L~-~~Gi~v~~~~~~~~~~--~~~~lRvs~~~~~t~~~id 431 (494)
+.++++..++ ..+++.+.+.+..+. + ..+++++|. ++|+.+....+|.... ....+|++++..+|.++|+
T Consensus 387 ~~g~~~~~~~-~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~ 465 (481)
T PLN02822 387 IPGLSIGSNT-LSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDIL 465 (481)
T ss_pred cCCcccCCCC-CCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHH
Confidence 8668776544 577888887532110 1 357899987 8899986544333211 1346999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 011057 432 RLVLDITKVLHELD 445 (494)
Q Consensus 432 ~~i~~l~~~~~~l~ 445 (494)
++++.|++++..+-
T Consensus 466 ~~~~~l~~~~~~~~ 479 (481)
T PLN02822 466 KASESLKRVAASVL 479 (481)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999998887653
No 108
>PLN02656 tyrosine transaminase
Probab=99.92 E-value=4.7e-22 Score=202.07 Aligned_cols=347 Identities=15% Similarity=0.092 Sum_probs=226.9
Q ss_pred cCCCCCcccccccC-----CChHHHHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecCh
Q 011057 53 DGNPRLNLASFVTT-----WMEPECDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGS 126 (494)
Q Consensus 53 ~~~~~~~~~~~~~~-----~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~gg 126 (494)
.+.+.++|..+.+. ++++.+.+++.+++..+ ...|....+..++++.+.+++....|...+ ...+++|+|+
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~---~~~i~~t~G~ 105 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLS---LDDVFITSGC 105 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC---cccEEEeCCh
Confidence 44555677776664 34567888888887764 345666678888888888888777665432 2358899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeE
Q 011057 127 SEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTIC 205 (494)
Q Consensus 127 t~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~ 205 (494)
++++.+++.++... +++|++++++|..+...+...|++++.+++++ +++.+|++++++++++++++
T Consensus 106 ~~al~~~~~~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (409)
T PLN02656 106 TQAIDVALSMLARP-------------GANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVA 172 (409)
T ss_pred HHHHHHHHHHHhCC-------------CCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceE
Confidence 99998888776331 26899999999988888899999999999863 34789999999999888999
Q ss_pred EEEeeCCCCcccc---cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCc-ccc-cccCCCceEEEEcCccc-C
Q 011057 206 VAAILGSTLNGEF---EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPE-LEW-DFRLPLVKSINVSGHKY-G 279 (494)
Q Consensus 206 vv~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~-~~~~~~~D~~~~~~hK~-l 279 (494)
|++++|+||||.+ +++++|+++|+++ ++++++|++|+.+.. .... ... .+....--++..++.|. +
T Consensus 173 v~l~~P~NPtG~~~s~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~vi~~~SfSK~f~ 244 (409)
T PLN02656 173 LVIINPGNPCGNVYSYQHLKKIAETAEKL------KILVIADEVYGHLAF--GSNPFVPMGVFGSIVPVLTLGSLSKRWI 244 (409)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEehhhhhccc--CCCCcccHHHhcccCcEEEEcccchhcc
Confidence 9999999999999 5688999999999 999999999987542 1111 010 11111112344567785 8
Q ss_pred CcCCceEEEEEeCCCC------cccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc---HhHHHHHHHHHHHH
Q 011057 280 LVYAGIGWVIWRNKED------LPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG---FEGYRNVMENCHEN 350 (494)
Q Consensus 280 ~~p~g~G~~~~~~~~~------~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~---~~g~~~~~~~~~~~ 350 (494)
+++.++||++..++.. +...+....... . ..+.+.+.++..++. ...+++..+.+.++
T Consensus 245 ~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~----------~---~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 311 (409)
T PLN02656 245 VPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDIL----------G---GPATFIQAAVPTILEQTDESFFKKTINILKQS 311 (409)
T ss_pred CcceeEEEEEEeCcccccccHHHHHHHHHHHhhh----------c---CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 8889999999854311 111111000000 0 012334555554443 34567777788888
Q ss_pred HHHHHHHHhhCCCeEEeecCCCccEEEEEecCC--CCC-CHHH-HHHHHHhcCceeeccccCCCCCCceEEEEEeccCCC
Q 011057 351 AMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDN--KRH-DEFE-VAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFS 426 (494)
Q Consensus 351 a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~--~~~-~~~~-l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t 426 (494)
++++.+.|++++++.....+....++.++++.. ... +..+ +.+.|.++|+.+...... ....++|++++. +
T Consensus 312 r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f---g~~~~iRi~~~~--~ 386 (409)
T PLN02656 312 SDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAV---GLKNWLRITFAA--D 386 (409)
T ss_pred HHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhc---CCCCeEEEEeCC--C
Confidence 899999999886443222332333444555311 111 2434 456778899987543322 124589999984 4
Q ss_pred hHHHHHHHHHHHHHH
Q 011057 427 RTLAERLVLDITKVL 441 (494)
Q Consensus 427 ~~~id~~i~~l~~~~ 441 (494)
.++++..++.|++++
T Consensus 387 ~e~l~eal~rl~~~~ 401 (409)
T PLN02656 387 PSSLEEALGRIKSFY 401 (409)
T ss_pred HHHHHHHHHHHHHHH
Confidence 555554444444433
No 109
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.92 E-value=5.4e-22 Score=201.21 Aligned_cols=341 Identities=12% Similarity=0.030 Sum_probs=225.1
Q ss_pred CCCCCcccccccC-CChHHHHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHH
Q 011057 54 GNPRLNLASFVTT-WMEPECDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIM 131 (494)
Q Consensus 54 ~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~ 131 (494)
+...++|..+.++ .+++.+.+++.++++.. ...|. .++..++++.+.+++.+..|.+.+. ...+++|+|+++++.
T Consensus 31 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~--~~~I~it~G~~~al~ 107 (399)
T PRK07681 31 GHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNA--DKEVLLLMGSQDGLV 107 (399)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCC--CCeEEECCCcHHHHH
Confidence 3344555555543 34567888888776542 12222 3578888888888888877765421 135889999999998
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCC-ccccCHHHHHHhhhhCCeEEEEee
Q 011057 132 LAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEG-YYVMDPVKAVEMVDENTICVAAIL 210 (494)
Q Consensus 132 ~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~t~~vv~~~ 210 (494)
+++.++... ++.|+++.++|..+...++..|++++.++++++ .+.+|++++++++.+++++|++++
T Consensus 108 ~~~~~~~~~-------------Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~ 174 (399)
T PRK07681 108 HLPMVYANP-------------GDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNF 174 (399)
T ss_pred HHHHHhCCC-------------CCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeC
Confidence 877766321 368999999999999999999999999999743 467899999999888899999999
Q ss_pred CCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc---CCCceEEEEcCcccC-CcCC
Q 011057 211 GSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR---LPLVKSINVSGHKYG-LVYA 283 (494)
Q Consensus 211 ~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~---~~~~D~~~~~~hK~l-~~p~ 283 (494)
|+||||.+.+ +++|+++|+++ ++++++|++|+.+.. .......... .....++..++.|.+ .++.
T Consensus 175 P~NPTG~~~s~~~~~~i~~~a~~~------~~~iI~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl 246 (399)
T PRK07681 175 PGNPVPAMAHEDFFKEVIAFAKKH------NIIVVHDFAYAEFYF--DGNKPISFLSVPGAKEVGVEINSLSKSYSLAGS 246 (399)
T ss_pred CCCCcCcCCCHHHHHHHHHHHHHc------CeEEEEeccchhhee--CCCCCCChhhCCCCcccEEEEeecccccCCccc
Confidence 9999999977 77888899999 999999999987642 1111000011 112235556788977 4778
Q ss_pred ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc--HhHHHHHHHHHHHHHHHHHHHHhhC
Q 011057 284 GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--FEGYRNVMENCHENAMVLKEGLEKT 361 (494)
Q Consensus 284 g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~--~~g~~~~~~~~~~~a~~l~~~L~~~ 361 (494)
++||++.. +..+ ..+.....+.. .+ .+.+.+.++...+. ...+++..+.+.++++++.+.|++.
T Consensus 247 RiG~~i~~-~~l~-~~~~~~~~~~~---------~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (399)
T PRK07681 247 RIGYMIGN-EEIV-RALTQFKSNTD---------YG---VFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF 312 (399)
T ss_pred eeEEEecC-HHHH-HHHHHHHhhcc---------cC---CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 89999853 3222 22111111100 01 12223444444442 3345566667778888999999988
Q ss_pred CCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHh-cCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHH
Q 011057 362 GRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRR-FGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITK 439 (494)
Q Consensus 362 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~ 439 (494)
+ +++..+. ...++.+.+++ +.+..++++.|.+ +|+.+....... ..+..++|+++.. +.++++.+++.|++
T Consensus 313 g-~~~~~p~-~g~f~~~~l~~--~~~~~~~~~~l~~~~gv~v~pg~~f~-~~~~~~iRis~~~--~~~~~~~~l~~l~~ 384 (399)
T PRK07681 313 G-WNVDKPA-GSMFVWAEIPK--GWTSLSFAYALMDRANVVVTPGHAFG-PHGEGFVRIALVQ--DEEVLQQAVENIRN 384 (399)
T ss_pred C-CcccCCC-eeeEEEEECCC--CCCHHHHHHHHHHhCCEEEeCChhhC-cCCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 5 7764443 44555566632 4567889998877 899875432211 1234589999973 45666655555544
No 110
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.92 E-value=4e-22 Score=208.14 Aligned_cols=351 Identities=15% Similarity=0.062 Sum_probs=221.8
Q ss_pred cCCCCCcccccccC----CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASFVTT----WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
.|+..++|..+.+. ++++.+.+++.+++.. ...|....+..++++.+.+++.+..+...+ ...+++|+|+++
T Consensus 144 ~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~-~~~Y~~~~G~~~lReaia~~~~~~~~~~~~---~~~I~it~G~~e 219 (517)
T PRK13355 144 AGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD-TEGYSDSKGLFSARKAIMQYAQLKGLPNVD---VDDIYTGNGVSE 219 (517)
T ss_pred cCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCcChHHHHHHHHHHHHhcCCCCCC---hhHEEEeCcHHH
Confidence 45555666665552 2355677777776653 334666667888888877777554332221 135999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEE
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVA 207 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv 207 (494)
++.+++.++.+. +++|+++.++|..+...++..|++++.+++++ ++|.+|+++|++++.+++++|+
T Consensus 220 al~~~~~~l~~~-------------Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~ 286 (517)
T PRK13355 220 LINLSMSALLDD-------------GDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIV 286 (517)
T ss_pred HHHHHHHHhCCC-------------CCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEE
Confidence 999888776331 36899999999999999999999999999874 3588999999999999999999
Q ss_pred EeeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc-CCCceEEE-EcCccc-CCc
Q 011057 208 AILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSIN-VSGHKY-GLV 281 (494)
Q Consensus 208 ~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~D~~~-~~~hK~-l~~ 281 (494)
+++|+||||.+.+ +++|+++|+++ ++++++|++|..+.. .......-.. .....+++ .++.|. +++
T Consensus 287 i~nP~NPTG~v~~~~~l~~i~~~a~~~------~~~ii~DE~Y~~~~~--~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~ 358 (517)
T PRK13355 287 IINPNNPTGALYPREVLQQIVDIAREH------QLIIFSDEIYDRLVM--DGLEHTSIASLAPDLFCVTFSGLSKSHMIA 358 (517)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHc------CcEEEEehhhhhhcC--CCCCcccHHHhCCCCeEEEEecchhhccCc
Confidence 9999999999977 88899999999 999999999987542 1100000001 11222333 456786 578
Q ss_pred CCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH-hHHHHH---HHHHHHHHHHHHHH
Q 011057 282 YAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNV---MENCHENAMVLKEG 357 (494)
Q Consensus 282 p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~---~~~~~~~a~~l~~~ 357 (494)
++++||+++..+..+...+......... .....+..+++++..++.. +.+.+. .++..+.++++.+.
T Consensus 359 G~RiG~~i~~~~~~~~~~~~~~l~~~~~---------~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~ 429 (517)
T PRK13355 359 GYRIGWMILSGNKRIAKDYIEGLNMLAN---------MRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNA 429 (517)
T ss_pred ccceEEEEeeCchhhHHHHHHHHHHHhc---------CcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999875322110000000000000 0001223345555555532 111111 23455667899999
Q ss_pred HhhCCCeEEeecCCCccEEEE-EecCCC--CCCHHHHH-HHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHH
Q 011057 358 LEKTGRFNIVSKDEGVPLVAF-SLKDNK--RHDEFEVA-ELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERL 433 (494)
Q Consensus 358 L~~~~~~~~~~~~~~~~~v~f-~~~~~~--~~~~~~l~-~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~ 433 (494)
|++++++++..+ ..++++| +++... ..+..+++ +.|.++|+.+....... ..+..++|+++. .+.++++..
T Consensus 430 L~~~~g~~~~~p--~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~-~~~~~~~Ris~~--~~~~~l~~a 504 (517)
T PRK13355 430 LNAIPGISAVKP--KAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFN-WDKPDHFRVVYL--PRLEDLEDA 504 (517)
T ss_pred HhcCCCcccCCC--CeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhC-CCCcCEEEEEeC--CCHHHHHHH
Confidence 999877876544 4677666 553210 11344444 56788899875433221 124568999995 355666655
Q ss_pred HHHHHHHHH
Q 011057 434 VLDITKVLH 442 (494)
Q Consensus 434 i~~l~~~~~ 442 (494)
++.|.++++
T Consensus 505 ~~rl~~~~~ 513 (517)
T PRK13355 505 MDRLADFFS 513 (517)
T ss_pred HHHHHHHHH
Confidence 555555554
No 111
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=2e-22 Score=201.28 Aligned_cols=323 Identities=18% Similarity=0.160 Sum_probs=220.9
Q ss_pred CcccccccCC-ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHH
Q 011057 58 LNLASFVTTW-MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLA 136 (494)
Q Consensus 58 ~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a 136 (494)
++|....++. +++.+.+++.+++......|. .++.. ++++.+|++++.++ ..+++|+|+++++.+++.+
T Consensus 27 i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~-~~~~~----~lr~aia~~~~~~~-----~~I~it~G~~~al~~~~~~ 96 (353)
T PRK05387 27 IKLNTNENPYPPSPKVLEAIRAALGDDLRLYP-DPNAD----ALRQAIAAYYGLDP-----EQVFVGNGSDEVLAHAFLA 96 (353)
T ss_pred eeccCCCCCCCCCHHHHHHHHHHhhhhhhcCC-CCcHH----HHHHHHHHHhCCCH-----HHEEEcCCHHHHHHHHHHH
Confidence 4445544443 457788888877664333332 22333 56677888888865 4599999999999988887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcc
Q 011057 137 FKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNG 216 (494)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG 216 (494)
+..+ +++|++++++|..+...++..|++++.++++++ +.+|++++++ .+++|++++|+||||
T Consensus 97 l~~~-------------gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~----~~~~v~~~~P~NPtG 158 (353)
T PRK05387 97 FFNH-------------DRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDD-FSIDVEDYLR----PNGGIIFPNPNAPTG 158 (353)
T ss_pred hcCC-------------CCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCC-CCCCHHHHHh----cCCEEEEeCCCCCCC
Confidence 7431 268999999998888889999999999998764 7899999864 357889999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCC-cCCceEEEEEeCCCC
Q 011057 217 EFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYAGIGWVIWRNKED 295 (494)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~G~~~~~~~~~ 295 (494)
.+.+.+++.++++.+. ++++++|++|+.+.. .+... ......-.++..++.|.++ ++.++|+++... ..
T Consensus 159 ~~~~~~~~~~l~~~~~-----~~~livDe~y~~~~~---~~~~~-~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~-~~ 228 (353)
T PRK05387 159 IALPLAEIERILAANP-----DSVVVIDEAYVDFGG---ESAIP-LIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP-EL 228 (353)
T ss_pred CCCCHHHHHHHHHhCC-----CcEEEEeCcccccCC---cchHH-HHhhCCCEEEEEehhHhhcchhhhceeeecCH-HH
Confidence 9999999999998753 899999999975421 01000 1111123577778999764 677899988533 22
Q ss_pred cccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc-HhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCcc
Q 011057 296 LPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-FEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVP 374 (494)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 374 (494)
+ +.+........ . .+ .+.+.+.++...+. .+.+++..++..++++++.+.|++++ +++.. + ..+
T Consensus 229 ~-~~l~~~~~~~~----~----~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~-~-~~~ 293 (353)
T PRK05387 229 I-EALNRVKNSFN----S----YP---LDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALG-FEVLP-S-KAN 293 (353)
T ss_pred H-HHHHHhhccCC----C----CC---cCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeECC-C-cCc
Confidence 2 21111100000 0 11 12334444444443 34466777888888999999999985 77543 2 456
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 375 LVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
++.+.++ +.+..++.++|.++|+.+..+..+ ....++|++++ +.++++++++.|++++.
T Consensus 294 ~~~~~~~---~~~~~~~~~~l~~~gi~v~~~~~~---~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 294 FVFARHP---SHDAAELAAKLRERGIIVRHFNKP---RIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred EEEEECC---CCCHHHHHHHHHHCCEEEEECCCC---CCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 6666653 357789999999999998644222 23468999987 66889999988887653
No 112
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.92 E-value=6.6e-22 Score=201.29 Aligned_cols=353 Identities=16% Similarity=0.075 Sum_probs=229.9
Q ss_pred cCCCCCcccccccC-----CChHHHHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhC------CCCCCCCCcce
Q 011057 53 DGNPRLNLASFVTT-----WMEPECDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFN------APLEDSETAVG 120 (494)
Q Consensus 53 ~~~~~~~~~~~~~~-----~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g------~~~~~~~~~~~ 120 (494)
.+.+.++|..+.+. .+++.+.+++.++++.. ...|....+..++++.+.+++.+.++ ... +...+
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~---~~~~i 107 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTI---KKDNV 107 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCC---ChhhE
Confidence 44555677777664 34567888888777643 23455445778888887777776543 211 12458
Q ss_pred eeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhh
Q 011057 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMV 199 (494)
Q Consensus 121 ~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i 199 (494)
++|+|+++++.+++.++... +++|+++.++|..+...++..|++++.+++++ +++.+|+++|++++
T Consensus 108 ~it~G~~~al~~~~~~~~~~-------------gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~ 174 (412)
T PTZ00433 108 VLCSGVSHAILMALTALCDE-------------GDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLV 174 (412)
T ss_pred EEeCChHHHHHHHHHHhcCC-------------CCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHh
Confidence 99999999999888876321 26899999999999999999999999999864 34789999999999
Q ss_pred hhCCeEEEEeeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc--ccccCCCceEEEEc
Q 011057 200 DENTICVAAILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE--WDFRLPLVKSINVS 274 (494)
Q Consensus 200 ~~~t~~vv~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~D~~~~~ 274 (494)
.+++++|++++++||||.+.+ +++|+++|+++ ++++++|++|..+.. ...... ..+....--++..+
T Consensus 175 ~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~i~~~S 246 (412)
T PTZ00433 175 DDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEEL------RLPLISDEIYAGMVF--NGATFTSVADFDTTVPRVILGG 246 (412)
T ss_pred ccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHc------CCeEEEecccccccc--CCCCccchhhccCCCceEEEcc
Confidence 888999999999999998754 77789999999 999999999987542 111100 01110111245667
Q ss_pred CcccC-CcCCceEEEEEeCCCCccc-ccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc---HhHHHHHHHHHHH
Q 011057 275 GHKYG-LVYAGIGWVIWRNKEDLPE-ELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG---FEGYRNVMENCHE 349 (494)
Q Consensus 275 ~hK~l-~~p~g~G~~~~~~~~~~~~-~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~---~~g~~~~~~~~~~ 349 (494)
+.|.+ .++.++||+++.++..... .......+ ... . . ..+.+.+.++...+. ...+++..+++.+
T Consensus 247 fSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~-~~~----~--~---~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 316 (412)
T PTZ00433 247 TAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRL-GML----V--C---GPCSVVQAALGEALLNTPQEHLEQIVAKLEE 316 (412)
T ss_pred chhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHH-hhc----c--C---CCChHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 88976 7889999999744321111 00000000 000 0 0 112233444444442 3445666777888
Q ss_pred HHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCC--C-CCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCC
Q 011057 350 NAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNK--R-HDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDF 425 (494)
Q Consensus 350 ~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~--~-~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~ 425 (494)
+++.+.+.|++..++.+..+. ...++.++++... + .+..+++++|. ++|+.+....... ...++|+++..
T Consensus 317 ~r~~l~~~L~~~~~~~~~~p~-gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~---~~~~iRis~~~-- 390 (412)
T PTZ00433 317 GAMVLYNHIGECIGLSPTMPR-GSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFH---MPGFTRLTISR-- 390 (412)
T ss_pred HHHHHHHHHhcCCCCcccCCC-eeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccC---CCCeEEEEecC--
Confidence 888999999886556654432 3445556664210 1 25678999887 5799875433221 23579999974
Q ss_pred ChHHHHHHHHHHHHHHHHHh
Q 011057 426 SRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 426 t~~~id~~i~~l~~~~~~l~ 445 (494)
..++++..++.|.++++..+
T Consensus 391 ~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 391 PVEVLREAVERIKAFCERHK 410 (412)
T ss_pred CHHHHHHHHHHHHHHHHHhc
Confidence 36667766666666665443
No 113
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.92 E-value=3.5e-22 Score=204.15 Aligned_cols=348 Identities=13% Similarity=0.053 Sum_probs=231.4
Q ss_pred ChHHHHHHHHHHh-cccCCCC------CCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 011057 68 MEPECDKLMMAAI-NKNYVDM------DEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRK 140 (494)
Q Consensus 68 ~~p~~~~~~~~~~-~~~~~~~------~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~ 140 (494)
.+|.+.+++...+ +....++ .......++|+.+++..+++|+...... ...+.+++|+.||+.++.++..+
T Consensus 46 ~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~--~~nv~~~SG~~AN~av~~aL~~p 123 (475)
T PLN03226 46 TSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKW--GVNVQPLSGSPANFAVYTALLQP 123 (475)
T ss_pred CCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCccee--EEecCcCchHHHHHHHHHHhCCC
Confidence 4577888888777 4433322 2233567788777788889999875210 01223478999999888777432
Q ss_pred HHHHHHhcCCCCCCCeEEeCC------CcchHHHHHHHHcCCeeE----EEeccCCccccCHHHHHHhhhh-CCeEEEEe
Q 011057 141 WQNKRKAEGKPFDKPNIVTGA------NVQVCWEKFARYFEVELK----EVKLSEGYYVMDPVKAVEMVDE-NTICVAAI 209 (494)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~------~~h~s~~~~~~~~G~~v~----~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~ 209 (494)
++.|+..+ ..|.+....++..+..+. .++++.+++.+|+++|++++.. ++++|++.
T Consensus 124 -------------gD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~ 190 (475)
T PLN03226 124 -------------HDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG 190 (475)
T ss_pred -------------CCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe
Confidence 25777633 344444433333333322 3455555578999999998874 56655442
Q ss_pred eCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEE
Q 011057 210 LGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVI 289 (494)
Q Consensus 210 ~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~ 289 (494)
.+.+|...|+++|.++|+++ |++++||+||+.|.++.. ..... .+++|++++++|||+.+|.| |+++
T Consensus 191 --~S~~s~~~D~a~i~~ia~~~------ga~LlvD~AH~~Gli~~~--~~~~p--~~~~Div~~t~hK~L~GP~G-g~I~ 257 (475)
T PLN03226 191 --ASAYPRDWDYARMRKIADKV------GALLMCDMAHISGLVAAQ--EAASP--FEYCDVVTTTTHKSLRGPRG-GMIF 257 (475)
T ss_pred --cCcCCCccCHHHHHHHHHHc------CCEEEEEchhhhCcccCC--CCCCC--CCCCeEEEecCcccccCCCc-eEEE
Confidence 33468888999999999999 999999999998765321 11111 23799999999999999998 7777
Q ss_pred EeCCCCcccccccc---cCC--CCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCe
Q 011057 290 WRNKEDLPEELIFH---INY--LGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRF 364 (494)
Q Consensus 290 ~~~~~~~~~~~~~~---~~y--~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 364 (494)
+++. ......... .+| .......+.+.++.+...++++.++++.+...+++++.++..+++++|++.|.+.| +
T Consensus 258 ~~~~-~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G-~ 335 (475)
T PLN03226 258 FRKG-PKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKG-Y 335 (475)
T ss_pred Echh-hcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence 7553 221100000 011 11111112234556667788888999988777888889999999999999999965 9
Q ss_pred EEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCC--CCCceEEEE----EeccCCChHHHHHHHHHHH
Q 011057 365 NIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPAD--AQHITVLRV----VIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 365 ~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~--~~~~~~lRv----s~~~~~t~~~id~~i~~l~ 438 (494)
+++......+++.+.+.+ .+++..++.+.|...||.+.....|.. ......+|+ -++..++++|++++.+.|.
T Consensus 336 ~l~~~~t~~hi~lv~~~~-~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~ 414 (475)
T PLN03226 336 KLVTGGTDNHLVLWDLRP-LGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLH 414 (475)
T ss_pred EEEcCCCCCCEEEEEccC-CCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHH
Confidence 998754345677777643 367788899999999999865443321 011233776 3456778899999999999
Q ss_pred HHHHHHhc
Q 011057 439 KVLHELDS 446 (494)
Q Consensus 439 ~~~~~l~~ 446 (494)
++++....
T Consensus 415 ~~~~~~~~ 422 (475)
T PLN03226 415 RAVTIALK 422 (475)
T ss_pred HHHHHhhh
Confidence 98886533
No 114
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.92 E-value=5.3e-22 Score=197.75 Aligned_cols=322 Identities=16% Similarity=0.064 Sum_probs=213.3
Q ss_pred hHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCc-ceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 011057 69 EPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETA-VGVGTVGSSEAIMLAGLAFKRKWQNKRKA 147 (494)
Q Consensus 69 ~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~-~~~~t~ggt~a~~~a~~a~~~~~~~~~~~ 147 (494)
++.+.+++.+... ....|....+..++++.+.+++.+..|.+.+ .. .+++|+|+++++..++.++...
T Consensus 15 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~---~~~~Iiit~Gs~~ai~~~~~~~~~~------- 83 (350)
T TIGR03537 15 PPFIRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLD---PDAQVLPSAGSKEAIFHFPLVFIDP------- 83 (350)
T ss_pred CHHHHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCC---CCCcEEEcCChHHHHHHHHHHHcCC-------
Confidence 5677787776654 2344555557789999988988888786542 12 5899999999998877766321
Q ss_pred cCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEecc-CCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccC---HHH
Q 011057 148 EGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS-EGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFED---VKL 223 (494)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~---l~~ 223 (494)
| ..+++|+++.++|..+...++..|++++.++++ ++++.+|++++++++.++++++++++++||||.+.+ +++
T Consensus 84 -g--~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~ 160 (350)
T TIGR03537 84 -E--EDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKE 160 (350)
T ss_pred -C--CCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHH
Confidence 1 112589999999999999999999999999997 444679999999999889999999999999999977 888
Q ss_pred HHHHHHHhhcccCCCceEEEecccccccccccCCccc-ccccCCCceEEEEcCcccC-CcCCceEEEEEeCCCCcccccc
Q 011057 224 LNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE-WDFRLPLVKSINVSGHKYG-LVYAGIGWVIWRNKEDLPEELI 301 (494)
Q Consensus 224 I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~hK~l-~~p~g~G~~~~~~~~~~~~~~~ 301 (494)
|+++|+++ ++++++|++|+.+.. ..+... ..+..+ -..+..+++|.+ .++.++|+++. ++... ..+.
T Consensus 161 l~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~-~~i~~~s~SK~~g~~GlRiG~~~~-~~~~~-~~~~ 229 (350)
T TIGR03537 161 TIAMCREH------GIILCSDECYTEIYF--GEPPHSALEVGIE-NVLAFHSLSKRSGMTGYRSGFVAG-DEKLI-SFLR 229 (350)
T ss_pred HHHHHHHc------CcEEEEecccccccc--CCCCCchhhcCcC-CEEEEeecccccCCccccceeeec-CHHHH-HHHH
Confidence 99999999 999999999986432 111100 011111 224455788975 56777898864 32222 2111
Q ss_pred cccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc-HhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccE-EEEE
Q 011057 302 FHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-FEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPL-VAFS 379 (494)
Q Consensus 302 ~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~-v~f~ 379 (494)
....+.. .+.+ .+.+.++...+. .+..++..+++.++.+.+.+.|++.+ +++..+ ..++ +.+.
T Consensus 230 ~~~~~~~---------~~~~---~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g-~~~~~~--~g~~~~~~~ 294 (350)
T TIGR03537 230 KLRANFG---------VASP---DFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKVG-LEYLYP--DATFYLWVK 294 (350)
T ss_pred HHHHhhc---------cCCC---HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCC--CeEEEEEEE
Confidence 1111110 1111 112222222232 33445667777888889999999885 765543 3444 4455
Q ss_pred ecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHH
Q 011057 380 LKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVL 435 (494)
Q Consensus 380 ~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~ 435 (494)
++. ..+..++++.|.++|+.+....... ..+..++|+++. .+.++++..++
T Consensus 295 ~~~--~~~~~~l~~~L~~~gv~v~~g~~f~-~~~~~~~Ri~~~--~~~~~~~~~l~ 345 (350)
T TIGR03537 295 VPS--GIDAKDYALRLLENGIVVAPGENFG-SGEEGYVRVALV--PTLEECEEALR 345 (350)
T ss_pred CCC--CCCHHHHHHHHHHCCEEEcCchhhC-CCCCCEEEEEec--CCHHHHHHHHH
Confidence 532 3577899999999999885433221 122467999985 24555544443
No 115
>PRK07324 transaminase; Validated
Probab=99.92 E-value=4.3e-22 Score=199.87 Aligned_cols=335 Identities=13% Similarity=0.034 Sum_probs=214.0
Q ss_pred cCCCCCcccccccCCChH-HHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhC-CCCCCCCCcceeeecChhHHH
Q 011057 53 DGNPRLNLASFVTTWMEP-ECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFN-APLEDSETAVGVGTVGSSEAI 130 (494)
Q Consensus 53 ~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~ggt~a~ 130 (494)
.++...++.-+.+....| .+ +++..++......|+...+..++++. ++++++ .++ ..+++|+|+++|+
T Consensus 24 ~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~----ia~~~~~~~~-----~~vi~t~G~~~al 93 (373)
T PRK07324 24 AESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEA----VASLYQNVKP-----ENILQTNGATGAN 93 (373)
T ss_pred ccCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHH----HHHHhcCCCh-----hhEEEcCChHHHH
Confidence 344444444444433333 35 77777777666667666677776666 555553 443 3588999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEe
Q 011057 131 MLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAI 209 (494)
Q Consensus 131 ~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~ 209 (494)
.+++.++... +++|+++.++|..+...++..|++++.++++. +++.+|++++++++.+++++|+++
T Consensus 94 ~~~~~~l~~~-------------gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~ 160 (373)
T PRK07324 94 FLVLYALVEP-------------GDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICIN 160 (373)
T ss_pred HHHHHHhCCC-------------CCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEe
Confidence 9888776321 26899999999999999999999999999974 346789999999998899999999
Q ss_pred eCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCC-cCCce
Q 011057 210 LGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYAGI 285 (494)
Q Consensus 210 ~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~ 285 (494)
+++||||.+.+ +++|+++|+++ ++++++|++|...... +....-.....-.+...++.|.++ ++.++
T Consensus 161 ~p~NPtG~~~~~~~l~~i~~~a~~~------~~~ii~De~y~~l~~~---~~~~s~~~~~~~~I~~~s~SK~~~~~G~Ri 231 (373)
T PRK07324 161 NANNPTGALMDRAYLEEIVEIARSV------DAYVLSDEVYRPLDED---GSTPSIADLYEKGISTNSMSKTYSLPGIRV 231 (373)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEccccccccC---CCCCChhhccCCEEEEecchhhcCCcccee
Confidence 99999999977 88999999999 9999999999764321 111100011111244457779764 67889
Q ss_pred EEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc--HhHHHHHHHHHHHHHHHHHHHHhhCCC
Q 011057 286 GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--FEGYRNVMENCHENAMVLKEGLEKTGR 363 (494)
Q Consensus 286 G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~--~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (494)
||++. ++..+ ..+.....+. ++ + .+.+.++++...+. ..-+++..+...++++.+.+.|++.++
T Consensus 232 G~i~~-~~~li-~~~~~~~~~~-------~~-~----~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~ 297 (373)
T PRK07324 232 GWIAA-NEEVI-DILRKYRDYT-------MI-C----AGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPR 297 (373)
T ss_pred EEEec-CHHHH-HHHHHHhCcE-------Ee-c----CChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99987 33232 2221111111 00 1 11223444444442 223445556666778888899988876
Q ss_pred eEEeecCCCccEEEEEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 364 FNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 364 ~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
+....+. ....+.+.++. ..+..+++++|. +.|+.+....... ...++|++++. +++.++..++.|++++
T Consensus 298 ~~~~~p~-gg~~~~i~~~~--~~~~~~~~~~ll~~~gv~v~pg~~F~---~~~~iRis~~~--~~~~l~~~l~rl~~~l 368 (373)
T PRK07324 298 VSYVKPK-AVSTSFVKLDV--DMPSEDFCLKLLKETGVLLVPGNRFD---LEGHVRIGYCC--DTETLKKGLKKLSEFL 368 (373)
T ss_pred ceEECCC-ceEEEEEEeCC--CCCHHHHHHHHHHhcCEEEECccccC---CCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 7665543 23333344432 356788998875 6799875433221 23579999874 3555554444444443
No 116
>PRK07683 aminotransferase A; Validated
Probab=99.92 E-value=7.4e-22 Score=199.33 Aligned_cols=341 Identities=15% Similarity=0.111 Sum_probs=224.3
Q ss_pred CcccccccCCC-hHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHH
Q 011057 58 LNLASFVTTWM-EPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLA 136 (494)
Q Consensus 58 ~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a 136 (494)
+.|..+.+..+ ++.+.+++.+++......|...++..++++++.+++.+..|.+.+.. ..+++|+|+++|+.+++.+
T Consensus 31 i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~--~~I~~t~G~~~al~~~~~~ 108 (387)
T PRK07683 31 ISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPE--SEIIVTIGASEAIDIAFRT 108 (387)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CcEEEeCChHHHHHHHHHH
Confidence 45555554433 46688888888876555666667888899888888877667643211 1489999999999988776
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcc
Q 011057 137 FKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNG 216 (494)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG 216 (494)
+.. .+++|+++.+.+..+..+++..|++++.++.+++++.+|.+++++.+.+++++|++++++||||
T Consensus 109 l~~-------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG 175 (387)
T PRK07683 109 ILE-------------PGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTG 175 (387)
T ss_pred hCC-------------CCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCC
Confidence 532 1268999999999899999999999999998765578899999999988899999999999999
Q ss_pred cccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc-ccc-cCCCceEEEEcCcccCC-cCCceEEEEE
Q 011057 217 EFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE-WDF-RLPLVKSINVSGHKYGL-VYAGIGWVIW 290 (494)
Q Consensus 217 ~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-~~~~~D~~~~~~hK~l~-~p~g~G~~~~ 290 (494)
.+.+ +++|+++|+++ ++++++|++|+.+.. ..+... ..+ ....-..+..++.|.++ ++.++||++.
T Consensus 176 ~~~s~~~~~~l~~~~~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~ 247 (387)
T PRK07683 176 VTLSKEELQDIADVLKDK------NIFVLSDEIYSELVY--EQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFA 247 (387)
T ss_pred cCCCHHHHHHHHHHHHHc------CeEEEEeccccccee--CCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEc
Confidence 9854 78899999999 999999999987542 111100 011 11122455567788876 7788999986
Q ss_pred eCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh--cHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEee
Q 011057 291 RNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL--GFEGYRNVMENCHENAMVLKEGLEKTGRFNIVS 368 (494)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l--~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (494)
..+ .+ ..+.....|... + .+.+.+.++...+ +...+++..+++.++++++.+.|.+.+ +.+..
T Consensus 248 ~~~-l~-~~~~~~~~~~~~--------~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~ 312 (387)
T PRK07683 248 PSY-LA-KHILKVHQYNVT--------C----ASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMG-LDVEK 312 (387)
T ss_pred CHH-HH-HHHHHHHHhccC--------C----CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC-CcccC
Confidence 432 22 211111111100 1 1112344444343 334455667777888889999998875 66544
Q ss_pred cCCCccEEEEEecCCCCCCHHHHHHH-HHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 369 KDEGVPLVAFSLKDNKRHDEFEVAEL-LRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 369 ~~~~~~~v~f~~~~~~~~~~~~l~~~-L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
+ ..+++.|...+....+..+++.. |.++|+.+....... ..+..++|++++. +++++...++.|.+++
T Consensus 313 ~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~-~~~~~~~Ri~~~~--~~~~~~~al~~l~~~l 381 (387)
T PRK07683 313 P--TGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFS-EYGEGYVRLSYAY--SIETLKEGLDRLEAFL 381 (387)
T ss_pred C--CeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhC-CCCCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 3 34555554322123456677765 577899875433221 1235689999984 4555554444444433
No 117
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.5e-22 Score=202.24 Aligned_cols=322 Identities=15% Similarity=0.140 Sum_probs=222.1
Q ss_pred CcccccccC-CChHHHHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHH
Q 011057 58 LNLASFVTT-WMEPECDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGL 135 (494)
Q Consensus 58 ~~~~~~~~~-~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~ 135 (494)
+.|....++ ++++.+.+++.+++... ...|.. ++.. ++++++++++|.+.+ ..+++|+|+++++.+++.
T Consensus 29 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~----~lr~~ia~~~~~~~~----~~I~~t~G~~~~i~~~~~ 99 (356)
T PRK04870 29 VKLDAMENPYRLPAELRAELGERLAEVALNRYPD-PRAA----ALKAALRAAMGVPAG----ADVLLGNGSDELIQLLAL 99 (356)
T ss_pred eeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC-CCHH----HHHHHHHHHhCcCCC----CcEEEcCCHHHHHHHHHH
Confidence 334444333 45678999998887643 233432 3443 456668888887641 248899999999887776
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh-CCeEEEEeeCCCC
Q 011057 136 AFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAAILGSTL 214 (494)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~~~~~~ 214 (494)
++... +++|+++.++|..+...++..|++++.++++++ +.+|+++|++++.+ ++++|++++++||
T Consensus 100 ~~~~~-------------gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~-~~~d~~~l~~~~~~~~~~~v~l~~p~NP 165 (356)
T PRK04870 100 ACAKP-------------GATVLAPEPGFVMYRMSAKLAGLEFVGVPLTAD-FTLDLPAMLAAIAEHRPALVFLAYPNNP 165 (356)
T ss_pred HhcCC-------------CCEEEECCCCHHHHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHhhcCCCCEEEEcCCCCC
Confidence 66321 268999999999999999999999999999764 78999999999864 7899999999999
Q ss_pred cccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccc-cCCCceEEEEcCcccCCcCCceEEEEEeCC
Q 011057 215 NGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF-RLPLVKSINVSGHKYGLVYAGIGWVIWRNK 293 (494)
Q Consensus 215 tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~ 293 (494)
||.+.+.+++.++++.. ++++++|++|..+.. ......+ .... ..+..++.|++.++.++|+++..+
T Consensus 166 tG~~~~~~~~~~i~~~~------~~~ii~De~y~~~~~----~~~~~~~~~~~~-vi~~~S~SK~~~~GlRiG~~i~~~- 233 (356)
T PRK04870 166 TGNLFDDADVERIIEAA------PGLVVVDEAYQPFAG----DSWLPRLARFPN-LLVMRTVSKLGLAGLRLGYLAGHP- 233 (356)
T ss_pred CCCCCCHHHHHHHHHHC------CCEEEEECCchhhcC----cchHHHHhhCCC-EEEEecchhhhhHHHhhhhhhCCH-
Confidence 99999999999999888 889999999976431 1100011 1122 356667889877778899987643
Q ss_pred CCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc-HhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCC
Q 011057 294 EDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-FEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEG 372 (494)
Q Consensus 294 ~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 372 (494)
..+.........| . .+.+.+.++...+. .+.+++..++..++++++.+.|++++++.+. ++ .
T Consensus 234 ~~i~~~~~~~~~~------------~---~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~-~ 296 (356)
T PRK04870 234 AWIAELDKVRPPY------------N---VNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVF-PS-A 296 (356)
T ss_pred HHHHHHHHccCCC------------c---CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CC-C
Confidence 2221111111111 0 11223333333332 2346677788888999999999998777654 32 4
Q ss_pred ccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 373 VPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
.+++.+.++ +..++.+.|.++||.+....... .....++|++++ +.+++++|+++|+++
T Consensus 297 ~~~~~~~~~-----~~~~~~~~l~~~gI~v~~~~~f~-~~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 297 ANFILVRVP-----DAAAVFDGLKTRGVLVKNLSGMH-PLLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred CeEEEEECC-----CHHHHHHHHHHCCEEEEECCCCC-CCCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 567777763 35689999999999986433221 123468999988 678899999988765
No 118
>PRK12414 putative aminotransferase; Provisional
Probab=99.91 E-value=3.1e-22 Score=201.85 Aligned_cols=327 Identities=12% Similarity=0.069 Sum_probs=217.0
Q ss_pred CCcccccccCC-ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHH
Q 011057 57 RLNLASFVTTW-MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGL 135 (494)
Q Consensus 57 ~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~ 135 (494)
.++|..+.+.. +++.+.+++.+++......|....+..++++.+++++++++|.+.+. ...+++|+|+++++..++.
T Consensus 31 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~--~~~i~it~g~~~al~~~~~ 108 (384)
T PRK12414 31 ALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDP--ASEVTVIASASEGLYAAIS 108 (384)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEECChHHHHHHHHH
Confidence 35555554443 35678888877665443456566688999999999999999985311 1248899999999988877
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCc
Q 011057 136 AFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLN 215 (494)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~t 215 (494)
++... +++|+++.++|..+...++..|++++.++++++++.+|+++|++++.+++++|++++++|||
T Consensus 109 ~l~~~-------------gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPT 175 (384)
T PRK12414 109 ALVHP-------------GDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPS 175 (384)
T ss_pred HhcCC-------------CCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCC
Confidence 66321 26899999999999999999999999999875557899999999998889999999999999
Q ss_pred ccc---cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcc-c-ccc-cCCCceEEEEcCcccC-CcCCceEEE
Q 011057 216 GEF---EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPEL-E-WDF-RLPLVKSINVSGHKYG-LVYAGIGWV 288 (494)
Q Consensus 216 G~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~-~~~~~D~~~~~~hK~l-~~p~g~G~~ 288 (494)
|.+ +++++|+++|+++ ++++++|++|..+.. ..... . ..+ ....-.++..++.|.+ +++.++||+
T Consensus 176 G~~~s~~~~~~i~~~a~~~------~~~ii~De~Y~~~~~--~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~ 247 (384)
T PRK12414 176 ATVFSAADLARLAQLTRNT------DIVILSDEVYEHVVF--DGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYC 247 (384)
T ss_pred CcCCCHHHHHHHHHHHHHC------CeEEEEhhhhhhccC--CCCCccCcccCcCccCcEEEEecccccccCccceEEEE
Confidence 998 5688899999999 999999999986532 11000 0 011 1111235667788977 578889999
Q ss_pred EEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Q 011057 289 IWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEKTGRFNIV 367 (494)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 367 (494)
+...+ .+ ..+.....+.. + + .+.+.+.++...+.. ..+.+..+.+.++++++.+.|++.+ +++.
T Consensus 248 v~~~~-l~-~~l~~~~~~~~-------~-~----~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~ 312 (384)
T PRK12414 248 LAPAE-LM-DEIRKVHQFMV-------F-S----ADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGSR-FELL 312 (384)
T ss_pred ecCHH-HH-HHHHHHHhhee-------c-C----CCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhCC-Ceec
Confidence 86542 22 11111111100 0 0 112334444444432 2234556677788889999999985 7765
Q ss_pred ecCCCccEEEE-EecCCCCCCHHHHH-HHHHhcCceeeccccCC-CCCCceEEEEEecc
Q 011057 368 SKDEGVPLVAF-SLKDNKRHDEFEVA-ELLRRFGWIVPAYTMPA-DAQHITVLRVVIRE 423 (494)
Q Consensus 368 ~~~~~~~~v~f-~~~~~~~~~~~~l~-~~L~~~Gi~v~~~~~~~-~~~~~~~lRvs~~~ 423 (494)
.+ ..+++.| .+.+....+..+++ +.|.++|+.+....... ...+..++|+++..
T Consensus 313 ~~--~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~ 369 (384)
T PRK12414 313 PS--EGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK 369 (384)
T ss_pred CC--CcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC
Confidence 43 3566555 55321122344555 56678899875433211 11224689999984
No 119
>PRK07337 aminotransferase; Validated
Probab=99.91 E-value=8.2e-22 Score=199.27 Aligned_cols=333 Identities=15% Similarity=0.071 Sum_probs=218.6
Q ss_pred CCCcccccccCC-ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHH
Q 011057 56 PRLNLASFVTTW-MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAG 134 (494)
Q Consensus 56 ~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~ 134 (494)
..+.|..+.++. +++.+.+++.+++......|....+..++++.+.+++.+.+|.+.+ ...+++|+|+++|+.+++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~---~~~i~~t~G~~~al~~~~ 107 (388)
T PRK07337 31 DIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVA---PERIVVTAGASAALLLAC 107 (388)
T ss_pred CEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC---hHhEEEecCcHHHHHHHH
Confidence 334455555443 3567788888777654455655567888998988888887786532 135889999999998877
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEeeCCC
Q 011057 135 LAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAILGST 213 (494)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~~~~ 213 (494)
.+... .+++|+++.++|..+...++..|++++.++++. +++.+|++++++.+.+++++|++++|+|
T Consensus 108 ~~l~~-------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~N 174 (388)
T PRK07337 108 LALVE-------------RGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSN 174 (388)
T ss_pred HHhcC-------------CCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCC
Confidence 76632 136899999999999998899999999999974 3578999999999998999999999999
Q ss_pred CcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEE-EEcCcccC-CcCCceEEE
Q 011057 214 LNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSI-NVSGHKYG-LVYAGIGWV 288 (494)
Q Consensus 214 ~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~hK~l-~~p~g~G~~ 288 (494)
|||.+.+ +++|+++|+++ ++++++|++|..+.. . +....-... ..+++ ..+++|.+ +++.++|++
T Consensus 175 PtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~-~~~~~~~~~-~~~vi~~~S~SK~~~~~G~RiG~~ 244 (388)
T PRK07337 175 PTGTSIAPDELRRIVEAVRAR------GGFTIVDEIYQGLSY--D-AAPVSALSL-GDDVITINSFSKYFNMTGWRLGWL 244 (388)
T ss_pred CCCcCcCHHHHHHHHHHHHHC------CCEEEEecccccccc--C-CCCcChhhc-cCCEEEEEechhhcCCchhheeee
Confidence 9999865 67888899999 999999999986532 1 110000111 22333 44778977 577789999
Q ss_pred EEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH---hHHHHHHHHHHHHHHHHHHHHhhCCCeE
Q 011057 289 IWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF---EGYRNVMENCHENAMVLKEGLEKTGRFN 365 (494)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~---~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (494)
++.+. .+ ..+.....+.. .. .+.+.+.+++..+.. +.+++..+.+.++++++.+.|++++ +.
T Consensus 245 ~~~~~-l~-~~l~~~~~~~~---------~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~-~~ 309 (388)
T PRK07337 245 VVPEA-LV-GTFEKLAQNLF---------IC---ASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLG-FK 309 (388)
T ss_pred ecCHH-HH-HHHHHHHHHhc---------cC---CChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcC-Cc
Confidence 86532 22 11111111110 00 122234444444432 3355666777788889999999875 54
Q ss_pred EeecCCCccEEEEEecCC---CCCCHHHHHHHH-HhcCceeeccccCCCCCCceEEEEEeccCCChHHHH
Q 011057 366 IVSKDEGVPLVAFSLKDN---KRHDEFEVAELL-RRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAE 431 (494)
Q Consensus 366 ~~~~~~~~~~v~f~~~~~---~~~~~~~l~~~L-~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id 431 (494)
+...+....++.+.++.. ...+..+++++| .++|+.+..........+..++|++++. ..++++
T Consensus 310 ~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~--~~~~l~ 377 (388)
T PRK07337 310 VPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT--SMSRLE 377 (388)
T ss_pred cccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC--CHHHHH
Confidence 422232445666666421 124677888774 5789987543322211234689999984 344443
No 120
>PLN02187 rooty/superroot1
Probab=99.91 E-value=2.1e-21 Score=199.35 Aligned_cols=351 Identities=14% Similarity=0.062 Sum_probs=227.9
Q ss_pred CCCCcccccccC----C-ChHHHHHHHHHHhcccC-CCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 55 NPRLNLASFVTT----W-MEPECDKLMMAAINKNY-VDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 55 ~~~~~~~~~~~~----~-~~p~~~~~~~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
.+.++|+.+.+. + +++.+.+++.+++..+. ..|...++..++++.+.+++.+.+|.+.+ ...+++|+|+++
T Consensus 66 ~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~---~~~I~it~G~~~ 142 (462)
T PLN02187 66 KTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLT---PEDIFLTAGCNQ 142 (462)
T ss_pred CCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCC---cccEEEeCCHHH
Confidence 344556655443 2 23567788887776543 34556668888888888888776665432 245899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEE
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVA 207 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv 207 (494)
++.+++.++.+. +++|+++.++|+.+...++..|++++.+++.+ +++.+|+++|++++++++++|+
T Consensus 143 al~~~~~~l~~p-------------Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~ 209 (462)
T PLN02187 143 GIEIVFESLARP-------------NANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMV 209 (462)
T ss_pred HHHHHHHHhcCC-------------CCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEE
Confidence 999888877431 26899999999999989999999999998852 3588999999999988899999
Q ss_pred EeeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcc-c-cccc-CCCceEEEEcCccc-CC
Q 011057 208 AILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPEL-E-WDFR-LPLVKSINVSGHKY-GL 280 (494)
Q Consensus 208 ~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~~-~~~~D~~~~~~hK~-l~ 280 (494)
+++|+||||.+.+ +++|+++|+++ ++++++|++|+.+.. ..... . ..+. ...+ ++..++.|. +.
T Consensus 210 i~nP~NPTG~v~s~e~l~~i~~~a~~~------~i~iI~DE~Y~~l~f--~~~~~~s~~~~~~~~~v-i~l~SfSK~f~~ 280 (462)
T PLN02187 210 VINPNNPCGNVYSHDHLKKVAETARKL------GIMVISDEVYDRTIF--GDNPFVSMGKFASIVPV-LTLAGISKGWVV 280 (462)
T ss_pred EeCCCCCCCCccCHHHHHHHHHHHHHC------CCEEEEecccccccc--CCCCceeHHHhccCCcE-EEEecchhhcCC
Confidence 9999999999966 78889999999 999999999987542 11110 0 0111 1112 334466676 88
Q ss_pred cCCceEEEEEeCCCCcc---cccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh---cHhHHHHHHHHHHHHHHHH
Q 011057 281 VYAGIGWVIWRNKEDLP---EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL---GFEGYRNVMENCHENAMVL 354 (494)
Q Consensus 281 ~p~g~G~~~~~~~~~~~---~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l---~~~g~~~~~~~~~~~a~~l 354 (494)
+++++||++..++..+. ..+.....+.. +... .+.+.+.++...+ ..+.+++..+.+.++++++
T Consensus 281 pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~-------~~~~---~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l 350 (462)
T PLN02187 281 PGWKIGWIALNDPEGVFETTKVLQSIKQNLD-------VTPD---PATIIQAALPAILEKADKNFFAKKNKILKHNVDLV 350 (462)
T ss_pred ccceeEEEEecCchhHHHHHHHHHHHHHhcc-------ccCC---CCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 89999999985543210 11111001100 0000 1233344444444 2345677778888889999
Q ss_pred HHHHhhCCCeEEeecCCCccEEEEEecCC--CCC-CHHHHHH-HHHhcCceeeccccCCCCCCceEEEEEeccCCChHHH
Q 011057 355 KEGLEKTGRFNIVSKDEGVPLVAFSLKDN--KRH-DEFEVAE-LLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLA 430 (494)
Q Consensus 355 ~~~L~~~~~~~~~~~~~~~~~v~f~~~~~--~~~-~~~~l~~-~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~i 430 (494)
.+.|++++.+.....+...+++.+.+... .++ +..+++. .+.++|+.+...... ...+++|++++. ..+++
T Consensus 351 ~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~f---g~~~~iRis~~~--~~e~l 425 (462)
T PLN02187 351 CDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDAL---GLKNWMRITIGV--EAHML 425 (462)
T ss_pred HHHHhhCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECcccc---CCCCeEEEEeCC--CHHHH
Confidence 99999987443232332345555555321 122 4445554 557889987543222 124689999974 45666
Q ss_pred HHHHHHHHHHHHHHh
Q 011057 431 ERLVLDITKVLHELD 445 (494)
Q Consensus 431 d~~i~~l~~~~~~l~ 445 (494)
+..++.|.++++...
T Consensus 426 ~~al~rL~~~l~~~~ 440 (462)
T PLN02187 426 EDALERLKGFCTRHA 440 (462)
T ss_pred HHHHHHHHHHHHHhh
Confidence 666666666665443
No 121
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.91 E-value=6.8e-23 Score=184.79 Aligned_cols=327 Identities=15% Similarity=0.089 Sum_probs=229.9
Q ss_pred CChHHHHHHHHHHhcccCCCCCCCh---hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDEYP---VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQN 143 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~ 143 (494)
..+|++.++-.+++++...+..... ++..+.+.+...+|++.|.++ .++..++-.||.-++.+.+..
T Consensus 81 sshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED-------~ilypscfdANag~feail~p--- 150 (417)
T KOG1359|consen 81 SSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGRED-------TILYPSCFDANAGAFEAILTP--- 150 (417)
T ss_pred cCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCCc-------eEEeccccccchHHHHHhcCh---
Confidence 3479999999999998776665544 888999999999999999975 777888888888777776443
Q ss_pred HHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhC---CeEEEEeeCCC-Cccccc
Q 011057 144 KRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDEN---TICVAAILGST-LNGEFE 219 (494)
Q Consensus 144 ~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~---t~~vv~~~~~~-~tG~~~ 219 (494)
++-|+.++..|.|+....++.. ...++|+-.|+..+.+. ...+++|.+.. +.|.+.
T Consensus 151 ----------edAvfSDeLNhASIIdGirLck----------ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdia 210 (417)
T KOG1359|consen 151 ----------EDAVFSDELNHASIIDGIRLCK----------RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIA 210 (417)
T ss_pred ----------hhhhhccccccchhhhhhHHHh----------hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCcc
Confidence 1357778889999988766644 12367777777655432 34466666665 779999
Q ss_pred CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc-CCCceEEEEcCcccCCcCCceEEEEEeCCCCccc
Q 011057 220 DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPE 298 (494)
Q Consensus 220 ~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~ 298 (494)
|+++|++++++| |.++++|++|+-|+...........++ ...+|.+..+..|.+++..| |+.- ... .+..
T Consensus 211 Pl~ei~~La~kY------gaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G-Gytt-gp~-~li~ 281 (417)
T KOG1359|consen 211 PLEEISQLAKKY------GALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG-GYTT-GPK-PLIS 281 (417)
T ss_pred cHHHHHHHHHhc------CcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC-CCcc-CCh-hHHH
Confidence 999999999999 999999999997654322222233444 34699999999998864332 3332 222 2212
Q ss_pred ccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEE
Q 011057 299 ELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAF 378 (494)
Q Consensus 299 ~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f 378 (494)
. +....+.+.++.+-|+..+-....++.++-.. .+.+.+...+.+++++.++..| |.+... ..|+..+
T Consensus 282 l-------lrqr~RpylFSnslppavV~~a~ka~dllm~s--~~~i~~~~a~~qrfr~~me~aG-ftIsg~--~hPI~pv 349 (417)
T KOG1359|consen 282 L-------LRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVS--SKEIQSRQANTQRFREFMEAAG-FTISGA--SHPICPV 349 (417)
T ss_pred H-------HHhcCCceeecCCCChhhhhhhHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHhcC-ceecCC--CCCccce
Confidence 1 22222233333444433332233333333221 3566777788899999998876 988765 3466666
Q ss_pred EecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 379 SLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 379 ~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
.+.+ ..-+..+++.|.++||+|-++.+|.++.+...+|+.++..+|++|||++++++.++.+-+..
T Consensus 350 ~lGd--a~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~~ 415 (417)
T KOG1359|consen 350 MLGD--ARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLNV 415 (417)
T ss_pred eccc--HHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhcc
Confidence 6532 22356788999999999999999999999999999999999999999999999988776543
No 122
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=9.5e-22 Score=197.76 Aligned_cols=323 Identities=14% Similarity=0.015 Sum_probs=217.8
Q ss_pred CCCcccccccC-CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHH
Q 011057 56 PRLNLASFVTT-WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAG 134 (494)
Q Consensus 56 ~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~ 134 (494)
..++|..+..+ +++|.+.+++.... ....| ..++. .++++++++++|+++ ..+++|+|+++++.+++
T Consensus 53 ~~i~l~~n~~p~~~~~~v~~a~~~~~--~~~~Y-p~~~~----~~lr~~ia~~~~~~~-----~~I~~t~Ga~~~i~~~~ 120 (380)
T PLN03026 53 DIVKLDANENPYGPPPEVLEALGNMK--FPYVY-PDPES----RRLRAALAEDSGLES-----ENILVGCGADELIDLLM 120 (380)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHhhH--hhccC-CCCCH----HHHHHHHHHHhCcCh-----hhEEEcCCHHHHHHHHH
Confidence 34555555433 45666777665421 11112 12232 346777999999875 35889999999998877
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhh-hhCCeEEEEeeCCC
Q 011057 135 LAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMV-DENTICVAAILGST 213 (494)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i-~~~t~~vv~~~~~~ 213 (494)
.+.... +++|+++++.|..+...++..|++++.++.+++ +.+|+++|++++ .+++++|++++|+|
T Consensus 121 ~~~~~~-------------gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~~~v~l~~P~N 186 (380)
T PLN03026 121 RCVLDP-------------GDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPD-FSLDVPRIVEAVETHKPKLLFLTSPNN 186 (380)
T ss_pred HHhcCC-------------CCEEEEcCCChHHHHHHHHHcCCEEEEeecCCC-CCcCHHHHHHHHhccCCcEEEEeCCCC
Confidence 665321 258999999999888888999999999998654 789999999998 67899999999999
Q ss_pred CcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccC-CcCCceEEEEEeC
Q 011057 214 LNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG-LVYAGIGWVIWRN 292 (494)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l-~~p~g~G~~~~~~ 292 (494)
|||.+.+.+++.++++ . .+++++|++|..+.. . ......+....-.++..++.|.+ +++.++|+++...
T Consensus 187 PTG~~~~~~~l~~l~~-~------~~~vi~DeaY~~~~~--~-~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~ 256 (380)
T PLN03026 187 PDGSIISDDDLLKILE-L------PILVVLDEAYIEFST--Q-ESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL 256 (380)
T ss_pred CCCCCCCHHHHHHHHh-c------CCEEEEECcchhhcC--C-cchHHHHHhCCCEEEEecchHhhcCccccceeeecCH
Confidence 9999999999999996 4 589999999986531 1 10001111112235556777876 4788899988543
Q ss_pred CCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC
Q 011057 293 KEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE 371 (494)
Q Consensus 293 ~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 371 (494)
..+.........| . .+.+++.++...+.. +.+++..+.+.+.++++.+.|++++.+++. ++
T Consensus 257 -~~i~~l~~~~~~~------------~---~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~- 318 (380)
T PLN03026 257 -SIIEYLWRAKQPY------------N---VSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEPY-PS- 318 (380)
T ss_pred -HHHHHHHHhcCCC------------C---CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEC-CC-
Confidence 2221111111111 0 122334444444432 335666777888889999999998755543 32
Q ss_pred CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 372 GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 372 ~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
..+++.+.+.. +.+..++.+.|.++||.++.+..+ ....++|++++ +.+++++|+++|+++
T Consensus 319 ~~~f~~~~~~~--~~~~~~~~~~l~~~gI~v~~~~~~---~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 319 DANFILCRVTS--GRDAKKLKEDLAKMGVMVRHYNSK---ELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred CCeEEEEECCC--CCCHHHHHHHHHHCCeEEEECCCC---CCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 56777887643 356789999999999998654322 23458999998 677888888888653
No 123
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.91 E-value=8.7e-22 Score=199.37 Aligned_cols=341 Identities=12% Similarity=0.041 Sum_probs=217.5
Q ss_pred CCCCCcccccccCCC-hHHHHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHH
Q 011057 54 GNPRLNLASFVTTWM-EPECDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIM 131 (494)
Q Consensus 54 ~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~ 131 (494)
|...++|..+.+..+ ++.+.+.+...+... ...|....+..++++.+.+|+.+.+|.+.+. ...+++|+|+++++.
T Consensus 34 g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~--~~~i~vt~G~~~al~ 111 (394)
T PRK05942 34 GLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDP--DSEALPLLGSKEGLT 111 (394)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCC--CCeEEEccChHHHHH
Confidence 334455555444433 344555555555432 2345555577889999999998877865321 113778999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEee
Q 011057 132 LAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAIL 210 (494)
Q Consensus 132 ~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~ 210 (494)
.++.++... +++|++++++|..+...+...|++++.++++. +++.+|++++++.+.+++++|++++
T Consensus 112 ~~~~~~~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~ 178 (394)
T PRK05942 112 HLALAYVNP-------------GDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNY 178 (394)
T ss_pred HHHHHhCCC-------------CCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcC
Confidence 887766321 36899999999998888889999999999874 3468999999999988999999999
Q ss_pred CCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc--ccc-cCCCceEEEEcCcccC-CcCC
Q 011057 211 GSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE--WDF-RLPLVKSINVSGHKYG-LVYA 283 (494)
Q Consensus 211 ~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~~~~~D~~~~~~hK~l-~~p~ 283 (494)
|+||||.+.+ +++|.++|+++ ++++++|++|+.+.. ...... ..+ ......+...++.|.+ +++.
T Consensus 179 P~NPtG~~~s~~~~~~i~~~a~~~------~~~iI~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~Gl 250 (394)
T PRK05942 179 PSNPTTATAPREFFEEIVAFARKY------EIMLVHDLCYAELAF--DGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGW 250 (394)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHc------CeEEEEeccchhhcc--CCCCCCChhhCCCccccEEEEecchhccCChhh
Confidence 9999999977 78899999999 999999999986542 110000 011 1122334456677955 6778
Q ss_pred ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCC
Q 011057 284 GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGR 363 (494)
Q Consensus 284 g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (494)
++|+++... ..+ +.+.....+.. .+.+.....++..+++ ...+.+++..+++.++++++.+.|++.+
T Consensus 251 RiG~i~~~~-~l~-~~l~~~~~~~~---------~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~- 317 (394)
T PRK05942 251 RVGFVVGNR-HII-QGLRTLKTNLD---------YGIFSALQKAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGELG- 317 (394)
T ss_pred heeeeecCH-HHH-HHHHHHHhhcc---------cCCCHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCC-
Confidence 899998643 222 22211111100 1111111122222232 1245566777788888899999998875
Q ss_pred eEEeecCCCcc-EEEEEecCCCCCCHHHHHHH-HHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 364 FNIVSKDEGVP-LVAFSLKDNKRHDEFEVAEL-LRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 364 ~~~~~~~~~~~-~v~f~~~~~~~~~~~~l~~~-L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
+.+..+ ..+ ++.+.++. ..+..++..+ |.++|+.+....... ..+..++|+++.. +.+++.+.|+++
T Consensus 318 ~~~~~~--~~~~f~~~~~~~--~~~~~~~~~~~l~~~gV~v~~g~~f~-~~~~~~iRis~~~-----~~~~l~~~l~~l 386 (394)
T PRK05942 318 WNIPPT--KATMYLWVPCPV--GMGSTDFALNVLQKTGVVVTPGNAFG-EGGEGYVRISLIA-----DCDRLGEALDRL 386 (394)
T ss_pred CeecCC--CeeeEEEEECCC--CCCHHHHHHHHHHHCCEEEeCChhhC-cCCCCeEEEEecC-----CHHHHHHHHHHH
Confidence 766544 345 44556532 3566677765 557899874432221 1235689999962 345555555444
No 124
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.91 E-value=1.2e-21 Score=197.97 Aligned_cols=345 Identities=15% Similarity=0.112 Sum_probs=226.2
Q ss_pred CCCcccccccCCC-hHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHH
Q 011057 56 PRLNLASFVTTWM-EPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAG 134 (494)
Q Consensus 56 ~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~ 134 (494)
+.++++.+.++.. ++.+.+++.+++......|....+..++++.+.+++...+|.+... ...+++|+|+++++.+++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~~i~it~G~~~al~~~~ 108 (391)
T PRK07309 31 GILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAP--ENEILVTIGATEALSASL 108 (391)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCChHHHHHHHH
Confidence 3455555554433 4567777777765443445555678889989888888877764311 134889999999999887
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh---CCeEEEEeeC
Q 011057 135 LAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE---NTICVAAILG 211 (494)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~t~~vv~~~~ 211 (494)
.++.. .+++|+++++.|..+...++..|++++.++.+++++.+|+++|++++.+ ++++|++++|
T Consensus 109 ~~~~~-------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P 175 (391)
T PRK07309 109 TAILE-------------PGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYP 175 (391)
T ss_pred HHhcC-------------CCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECC
Confidence 76632 1268999999999999999999999999998765578999999999864 5789999999
Q ss_pred CCCccccc---CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccc-c-CCCceEEEEcCcccC-CcCCce
Q 011057 212 STLNGEFE---DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF-R-LPLVKSINVSGHKYG-LVYAGI 285 (494)
Q Consensus 212 ~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~-~~~~D~~~~~~hK~l-~~p~g~ 285 (494)
+||||... ++++|+++|++| ++++++|++|+.+.. .... ...+ . ...-.++..+++|.+ .++.++
T Consensus 176 ~NPtG~~~s~~~~~~l~~~~~~~------~~~ii~D~~y~~~~~--~~~~-~~~~~~~~~~~~i~~~S~SK~~g~~GlRv 246 (391)
T PRK07309 176 ANPTGVTYSREQIKALADVLKKY------DIFVISDEVYSELTY--TGEP-HVSIAEYLPDQTILINGLSKSHAMTGWRI 246 (391)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHc------CcEEEEEccccceee--CCCC-CCCHHHhccCCEEEEecChhhccCcccee
Confidence 99999975 488899999999 999999999987642 1111 0011 1 112235566788876 477789
Q ss_pred EEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH--hHHHHHHHHHHHHHHHHHHHHhhCCC
Q 011057 286 GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF--EGYRNVMENCHENAMVLKEGLEKTGR 363 (494)
Q Consensus 286 G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~--~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (494)
|+++...+ .+.. +.....|... + .+.+.+.++..++.. .......+++.++++++.+.|++.+
T Consensus 247 G~~v~~~~-~~~~-~~~~~~~~~~--------~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 311 (391)
T PRK07309 247 GLIFAPAE-FTAQ-LIKSHQYLVT--------A----ATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLG- 311 (391)
T ss_pred EEEEeCHH-HHHH-HHHHHhhccc--------C----CChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCC-
Confidence 99986542 2211 1111111100 1 112233444444422 2223445566778889999999885
Q ss_pred eEEeecCCCccEEE-EEecCCCCCCHHHHHHHH-HhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 364 FNIVSKDEGVPLVA-FSLKDNKRHDEFEVAELL-RRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 364 ~~~~~~~~~~~~v~-f~~~~~~~~~~~~l~~~L-~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
+.+..+ ..+++. +.++.....+..+++++| .++|+.+....... ..+..++|++++. +.++++..++.|++++
T Consensus 312 ~~~~~p--~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~-~~~~~~iRi~~~~--~~~~l~~~i~~l~~~~ 386 (391)
T PRK07309 312 FKIIKP--DGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFG-PYGEGYVRLSYAA--SMETIKEAMKRLKEYM 386 (391)
T ss_pred CeecCC--CeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 776544 334443 455432223567888765 57899875432211 2235689999985 5677887777777777
Q ss_pred HHH
Q 011057 442 HEL 444 (494)
Q Consensus 442 ~~l 444 (494)
+++
T Consensus 387 ~~~ 389 (391)
T PRK07309 387 EEH 389 (391)
T ss_pred Hhh
Confidence 654
No 125
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.91 E-value=3.7e-21 Score=195.31 Aligned_cols=346 Identities=16% Similarity=0.104 Sum_probs=220.2
Q ss_pred CCCCCcccccccC-----CChHHHHHHHHHHhcccC-CCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 54 GNPRLNLASFVTT-----WMEPECDKLMMAAINKNY-VDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 54 ~~~~~~~~~~~~~-----~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
+.+.++|+.+.+. ++++.+.+++.+++.... ..|....+..++++.+.+++....|.+. +...+++|+|++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~---~~~~ii~t~G~t 106 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKL---TADDVVLTSGCS 106 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCC---CHHHEEEecChH
Confidence 4455666666553 445678888888776543 2454555666666665544443333322 123588999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEE
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICV 206 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~v 206 (494)
+|+.+++.++.. .+++|+++.++|..+...++..|++++.+++++ +++.+|++++++++.+++++|
T Consensus 107 ~al~~~~~~l~~-------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 173 (403)
T TIGR01265 107 QAIEICIEALAN-------------PGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAI 173 (403)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEE
Confidence 999988887732 126899999999999999999999999998853 346899999999998889999
Q ss_pred EEeeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc--cccc-CCCceEEEEcCccc-C
Q 011057 207 AAILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE--WDFR-LPLVKSINVSGHKY-G 279 (494)
Q Consensus 207 v~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~-~~~~D~~~~~~hK~-l 279 (494)
++++++||||.+.+ +++|.++|+++ |+++++|++|+.+.. ...... ..+. ... -.+..++.|. +
T Consensus 174 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~-vi~~~S~SK~~~ 244 (403)
T TIGR01265 174 VVINPSNPCGSVFSRDHLQKIAEVARKL------GIPIIADEIYGHMVF--GDAPFIPMASFASIVP-VLSLGGISKRWV 244 (403)
T ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEcccccccc--CCCCccchhhhccCCc-EEEEeecccccC
Confidence 99999999999965 88999999999 999999999987642 111100 0111 112 2444577886 6
Q ss_pred CcCCceEEEEEeCCC-Cccccc-ccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc---HhHHHHHHHHHHHHHHHH
Q 011057 280 LVYAGIGWVIWRNKE-DLPEEL-IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG---FEGYRNVMENCHENAMVL 354 (494)
Q Consensus 280 ~~p~g~G~~~~~~~~-~~~~~~-~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~---~~g~~~~~~~~~~~a~~l 354 (494)
+++.++||+++.++. .+...+ .....+... .. + .+.+.+.++...+. ..-+++..+.+.++++++
T Consensus 245 ~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~-----~~-~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 314 (403)
T TIGR01265 245 VPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQR-----IL-G----PATIVQGALPDILENTPQEFFDGKISVLKSNAELC 314 (403)
T ss_pred CCcceEEEEEEeCchhhhHHHHHHHHHHHhhh-----hc-C----CChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 788899999886542 111100 000001000 00 0 11222333333332 344566777788888899
Q ss_pred HHHHhhCCCeEEeecCCCccEEEEEecCCC---CCCHHHHHHHH-HhcCceeeccccCCCCCCceEEEEEeccCCChHHH
Q 011057 355 KEGLEKTGRFNIVSKDEGVPLVAFSLKDNK---RHDEFEVAELL-RRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLA 430 (494)
Q Consensus 355 ~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~---~~~~~~l~~~L-~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~i 430 (494)
.+.|+.++++++..+. ...++.++++... ..+..+++++| .+.|+.+....... ...++|++++. ..+++
T Consensus 315 ~~~L~~~~~~~~~~p~-~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~---~~~~iRis~~~--~~~~l 388 (403)
T TIGR01265 315 YEELKDIPGLVCPKPE-GAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFG---LPNWVRITITV--PESML 388 (403)
T ss_pred HHHHhcCCCceecCCC-ceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccC---CCCeEEEEecC--CHHHH
Confidence 9999988667654433 4566666664310 12567888885 57899875433221 24679999984 34444
Q ss_pred HHHHHHHHHH
Q 011057 431 ERLVLDITKV 440 (494)
Q Consensus 431 d~~i~~l~~~ 440 (494)
+..++.|.++
T Consensus 389 ~~~l~~l~~~ 398 (403)
T TIGR01265 389 EEACSRIKEF 398 (403)
T ss_pred HHHHHHHHHH
Confidence 4444334333
No 126
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=3.5e-22 Score=200.12 Aligned_cols=321 Identities=16% Similarity=0.084 Sum_probs=210.3
Q ss_pred CCCccccccc-CCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceee-ecChhHHHHHH
Q 011057 56 PRLNLASFVT-TWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVG-TVGSSEAIMLA 133 (494)
Q Consensus 56 ~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~ggt~a~~~a 133 (494)
..++|+.... ..++|.+.+++.+++... ..|.. +.. .++++.+++++|+++ ..+++ |+|+++++..+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~-~~~----~~lr~~ia~~~~~~~-----~~i~~~~~Ga~~~i~~~ 103 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSKI-HRYPE-PDA----PELREALSKYTGVPV-----ENIIVGGDGMDEVIDTL 103 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHhh-cCCCC-CCH----HHHHHHHHHHhCCCH-----HHEEEeCCCHHHHHHHH
Confidence 4455554432 235677777776665432 22221 222 446677888899865 34667 67788887766
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCC
Q 011057 134 GLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGST 213 (494)
Q Consensus 134 ~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~ 213 (494)
+.++.. .+++|+++.+.|..+...++..|++++.++.+++ +.+|++++++++++++++|++++++|
T Consensus 104 ~~~~~~-------------~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~v~~~~p~n 169 (361)
T PRK00950 104 MRTFID-------------PGDEVIIPTPTFSYYEISAKAHGAKPVYAKREED-FSLDVDSVLNAITEKTKVIFLCTPNN 169 (361)
T ss_pred HHHhcC-------------CCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCC-CCcCHHHHHHHhccCCCEEEEeCCCC
Confidence 655422 1257999999998888888999999999996654 78999999999988889999999999
Q ss_pred CcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccc-cCCCceEEEEcCcccCC-cCCceEEEEEe
Q 011057 214 LNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF-RLPLVKSINVSGHKYGL-VYAGIGWVIWR 291 (494)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~hK~l~-~p~g~G~~~~~ 291 (494)
|||.+.|+++|.++|+++ ++++++|++|+.+.. ....... ..+.+ .+..++.|.++ ++.++|+++..
T Consensus 170 ptG~~~~~~~l~~l~~~~------~~~li~De~y~~~~~----~~~~~~~~~~~~v-i~~~S~SK~~g~~GlRiG~~~~~ 238 (361)
T PRK00950 170 PTGNLIPEEDIRKILEST------DALVFVDEAYVEFAE----YDYTPLALEYDNL-IIGRTFSKVFGLAGLRIGYGFVP 238 (361)
T ss_pred CCCCCcCHHHHHHHHHHC------CcEEEEECchhhhCc----cchHHHHHhcCCE-EEEEeehHhhcCchhhcchhcCC
Confidence 999999999999999999 999999999986531 1111001 11222 44557789774 56678988754
Q ss_pred CCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHh-HHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC
Q 011057 292 NKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFE-GYRNVMENCHENAMVLKEGLEKTGRFNIVSKD 370 (494)
Q Consensus 292 ~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 370 (494)
+. .. ..+...... + . ...+.+.+++..+... .+++..++..++++++.+.|. +++. ++
T Consensus 239 ~~-~~-~~~~~~~~~-------~----~---~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~ 297 (361)
T PRK00950 239 EW-LI-DYYMRAKTP-------F----S---LTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVY-PS 297 (361)
T ss_pred HH-HH-HHHHHhcCC-------C----C---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeEC-CC
Confidence 32 22 111110000 0 0 1123344445444333 345556666666677766664 4443 22
Q ss_pred CCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 371 EGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 371 ~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
..+++.+.+. ..+..+++++|.++|+.+....... ..+..++|++++ +.++++++++.|++++
T Consensus 298 -~~~~i~~~~~---~~~~~~~~~~l~~~gv~v~~~~~f~-~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 298 -EANFVLVDVT---PMTAKEFCEELLKRGVIVRDCTSFR-GLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred -cceEEEEECC---CCCHHHHHHHHHHCCEEEeeCCccC-CCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 4567777762 3578899999999999885432211 123468999987 6788999999988865
No 127
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.91 E-value=1.2e-21 Score=202.85 Aligned_cols=336 Identities=14% Similarity=0.055 Sum_probs=215.5
Q ss_pred HHHHHHHHHHhccc---CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 011057 70 PECDKLMMAAINKN---YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 70 p~~~~~~~~~~~~~---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
..+.+++.++++.. ...|....+..++++.+.+++.+..|.+.+ ...+++|+|+++++.+++.++...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~---~~~I~it~Ga~~al~~~~~~l~~~------ 161 (481)
T PTZ00377 91 ADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKD---PSDIFLTDGASSGIKLLLQLLIGD------ 161 (481)
T ss_pred HHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCC---hhhEEEcCCHHHHHHHHHHHhccC------
Confidence 34455555555442 344666678899999999998887776642 245999999999999888877410
Q ss_pred hcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhh------CCeEEEEeeCCCCccccc
Q 011057 147 AEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDE------NTICVAAILGSTLNGEFE 219 (494)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~------~t~~vv~~~~~~~tG~~~ 219 (494)
.+++|+++.++|..+...++..|++++.+++++ +++.+|+++|++++++ ++++|++++|+||||.+.
T Consensus 162 ------~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~ 235 (481)
T PTZ00377 162 ------PSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVL 235 (481)
T ss_pred ------CCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCC
Confidence 136899999999999999999999999999974 4578999999999875 688899999999999997
Q ss_pred C---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc-----ccccCC---Cce-EEEEcCccc--CCcCCce
Q 011057 220 D---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE-----WDFRLP---LVK-SINVSGHKY--GLVYAGI 285 (494)
Q Consensus 220 ~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-----~~~~~~---~~D-~~~~~~hK~--l~~p~g~ 285 (494)
+ +++|+++|+++ ++++++|++|+.+...-..+... ..+... ... ++..++.|. .++++++
T Consensus 236 s~e~~~~i~~~a~~~------~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRi 309 (481)
T PTZ00377 236 TRDVMEEIIKFCYEK------GIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRG 309 (481)
T ss_pred CHHHHHHHHHHHHHC------CCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCce
Confidence 7 78899999999 99999999998653200001000 011100 111 334477895 4478999
Q ss_pred EEEEEe--CCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc-----Hh---HH----HHHHHHHHHHH
Q 011057 286 GWVIWR--NKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-----FE---GY----RNVMENCHENA 351 (494)
Q Consensus 286 G~~~~~--~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~-----~~---g~----~~~~~~~~~~a 351 (494)
||+++. ++..+ ..+...... .+ + .+.+++.++..++. .. .+ ++..+++.+++
T Consensus 310 G~~~~~~~p~~li-~~l~~~~~~--------~~-~----~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr 375 (481)
T PTZ00377 310 GYFELTNIPPEVR-EQIYKLASI--------NL-C----SNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRA 375 (481)
T ss_pred EEEEEeCCCHHHH-HHHHHHhhe--------ec-C----CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 999873 33222 211111000 00 1 12234444444442 11 12 22233456778
Q ss_pred HHHHHHHhhCCCeEEeecCCCccEEEE-EecCCCC---------C-CHHHH-HHHHHhcCceeeccccCCCCCCceEEEE
Q 011057 352 MVLKEGLEKTGRFNIVSKDEGVPLVAF-SLKDNKR---------H-DEFEV-AELLRRFGWIVPAYTMPADAQHITVLRV 419 (494)
Q Consensus 352 ~~l~~~L~~~~~~~~~~~~~~~~~v~f-~~~~~~~---------~-~~~~l-~~~L~~~Gi~v~~~~~~~~~~~~~~lRv 419 (494)
+.+.+.|++++++++..+ ..+++.| .+..+.. . +...+ ...|.++|+.+..........+..++|+
T Consensus 376 ~~l~~~L~~~~g~~~~~p--~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rl 453 (481)
T PTZ00377 376 ELLTDELNKIEGVSCQPV--EGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRI 453 (481)
T ss_pred HHHHHHHhcCCCcEeecC--CeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEE
Confidence 889999999877887644 3455554 3321111 1 12334 4556778998754332221123468999
Q ss_pred EeccCCChHHHHHHHHHHHHHHHHH
Q 011057 420 VIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 420 s~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
++. .+.++++..++.|+++++..
T Consensus 454 s~~--~~~e~l~~~l~rl~~~~~~~ 476 (481)
T PTZ00377 454 TIL--PPEEQIEEMVKKIKEFHESF 476 (481)
T ss_pred EEC--CCHHHHHHHHHHHHHHHHHH
Confidence 997 45677887777777776654
No 128
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=6.3e-22 Score=198.73 Aligned_cols=331 Identities=16% Similarity=0.068 Sum_probs=222.5
Q ss_pred CCCCCccccccc-CCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHH
Q 011057 54 GNPRLNLASFVT-TWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIML 132 (494)
Q Consensus 54 ~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~ 132 (494)
+...++|....+ ..++|.+.+++.+++.. ...|... .. .++++.+++++|.++ ..+++|+|+++++.+
T Consensus 31 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~y~~~-~~----~~lr~~ia~~~~~~~-----~~i~~t~G~~~~l~~ 99 (367)
T PRK02731 31 IADIIKLASNENPLGPSPKAIEAIRAAADE-LHRYPDG-SG----FELKAALAEKFGVDP-----ERIILGNGSDEILEL 99 (367)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHHHh-hcCCCCC-cH----HHHHHHHHHHhCcCH-----HHEEEcCCHHHHHHH
Confidence 334445555432 23456788887776643 2223222 22 246667888888865 358899999998876
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCC
Q 011057 133 AGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGS 212 (494)
Q Consensus 133 a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~ 212 (494)
.+.++.+ .+++|+++.+.|..+...++..|++++.+++++ +.+|++++++++++++++|++++++
T Consensus 100 ~~~~l~~-------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~~~~l~~~~~~~~~~v~l~~p~ 164 (367)
T PRK02731 100 LARAYLG-------------PGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAKD--YGHDLDAMLAAVTPRTRLVFIANPN 164 (367)
T ss_pred HHHHhcC-------------CCCEEEEecCCHHHHHHHHHHcCCeEEEecccC--CCCCHHHHHHHhCCCCcEEEEeCCC
Confidence 6655522 126899999999888888888999999998843 6799999999998889999999999
Q ss_pred CCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccc-cCCCceEEEEcCcccC-CcCCceEEEEE
Q 011057 213 TLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF-RLPLVKSINVSGHKYG-LVYAGIGWVIW 290 (494)
Q Consensus 213 ~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~hK~l-~~p~g~G~~~~ 290 (494)
||||.+.+.++|.++++.+.+ ++++++|++|..+... .......+. ....-.++..+..|.+ .++.++||++.
T Consensus 165 nptG~~~~~~~l~~l~~~~~~----~~~li~De~y~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~ 239 (367)
T PRK02731 165 NPTGTYLPAEEVERFLAGVPP----DVLVVLDEAYAEYVRR-KDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIA 239 (367)
T ss_pred CCCCcCCCHHHHHHHHHhCCC----CcEEEEECcHHHhccC-cCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeC
Confidence 999999999999999987521 7999999999765320 000000111 1111234455677875 46678899986
Q ss_pred eCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhhCCCeEEeec
Q 011057 291 RNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEKTGRFNIVSK 369 (494)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (494)
+++ .+ +.+..... .+. .+.+.+.++...+.. +.+++..++..++.+++.+.|++.+ +.+. +
T Consensus 240 ~~~-~~-~~l~~~~~-------~~~-------~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~-~ 301 (367)
T PRK02731 240 PPE-II-DALNRVRQ-------PFN-------VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELG-LEYI-P 301 (367)
T ss_pred CHH-HH-HHHHHccC-------CCC-------CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccC-C
Confidence 542 22 11111000 000 123445566666543 3356677777888899999999985 7665 3
Q ss_pred CCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 370 DEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 370 ~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
+ ..+++.+.++ ...+..+++++|.++|+.+....... ...++|++++ +.+++++|++.|+++++
T Consensus 302 ~-~g~~~~i~~~--~~~~~~~~~~~L~~~gI~v~~~~~~~---~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 302 S-VGNFILVDFD--DGKDAAEAYQALLKRGVIVRPVAGYG---LPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred C-CceEEEEECC--CCCCHHHHHHHHHHCCEEEEeCCCCC---CCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 2 4678888873 24578899999999999886543221 1357999986 67899999999988764
No 129
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=3.3e-22 Score=199.82 Aligned_cols=327 Identities=17% Similarity=0.125 Sum_probs=220.9
Q ss_pred CCCCcccccccC-CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHH
Q 011057 55 NPRLNLASFVTT-WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLA 133 (494)
Q Consensus 55 ~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a 133 (494)
+..+.|..+..+ +++|.+.+++.+++.... .| ...+..+ +++.+++++|+++ ..+++|+|+++++.++
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~-~Y-p~~g~~~----Lr~aia~~~~~~~-----~~I~vt~Gs~e~i~~~ 97 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSWLDHA-LY-PDGGATT----LRQTIANKLHVKM-----EQVLCGSGLDEVIQII 97 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHHHhcC-cC-CCCCHHH----HHHHHHHHhCCCc-----ceEEECCCHHHHHHHH
Confidence 334445554444 356778888877654421 12 2234434 5566888888876 3599999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCC
Q 011057 134 GLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGST 213 (494)
Q Consensus 134 ~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~ 213 (494)
+.++... ++.|+++.++|..+...++..|++++.+++++ +.+|+++|++++++++++|++++|+|
T Consensus 98 ~~~l~~~-------------gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~--~~~d~~~l~~~~~~~~~~v~i~~P~N 162 (366)
T PRK01533 98 SRAVLKA-------------GDNIVTAGATFPQYRHHAIIEGCEVKEVALNN--GVYDLDEISSVVDNDTKIVWICNPNN 162 (366)
T ss_pred HHHhcCC-------------CCEEEEcCCcHHHHHHHHHHcCCEEEEeecCC--CCcCHHHHHHHhCcCCcEEEEeCCCC
Confidence 8776331 25899999999999999999999999999864 46999999999988899999999999
Q ss_pred CcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccC-CcCCceEEEEEeC
Q 011057 214 LNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG-LVYAGIGWVIWRN 292 (494)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l-~~p~g~G~~~~~~ 292 (494)
|||.+.+.+++.++++...+ +.++++|++|..+...-..+.....+....-.++..++.|.+ +++.++||++..
T Consensus 163 PTG~~~~~~~l~~l~~~~~~----~~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~- 237 (366)
T PRK01533 163 PTGTYVNDRKLTQFIEGISE----NTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH- 237 (366)
T ss_pred CCCCCcCHHHHHHHHHhCCC----CCEEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC-
Confidence 99999998887777765321 346888999976532100000000111111234555778876 488889998753
Q ss_pred CCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHh-HHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC
Q 011057 293 KEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFE-GYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE 371 (494)
Q Consensus 293 ~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 371 (494)
+..+ ..+... . . . . ..+.+++.++..++... ..++..+...+.++++.+.++.++ +++..+
T Consensus 238 ~~~~-~~l~~~---~-~---~----~---~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~~-- 299 (366)
T PRK01533 238 EELI-EKLNVV---R-L---P----F---NVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKENE-IPFYQS-- 299 (366)
T ss_pred HHHH-HHHHHh---c-C---C----C---CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CccCCC--
Confidence 3222 211110 0 0 0 0 12344556666666433 344555666677888888888885 776544
Q ss_pred CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 372 GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 372 ~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
..+++.+.+. +..++.++|.++||.|+.+ ..++||+++ +.+++++|+++|+++++-.++
T Consensus 300 ~~nf~~~~~~-----~~~~~~~~l~~~GI~Vr~~--------~~~iRis~~---~~~~~~~l~~al~~~~~~~~~ 358 (366)
T PRK01533 300 QTNFIFLPVE-----NGGEIYEACAHAGFIIRPF--------PNGVRITVG---TREQNEGVISVLQQHFENKKR 358 (366)
T ss_pred cCcEEEEeCC-----CHHHHHHHHHHCCcEEccC--------CCceEEeCC---CHHHHHHHHHHHHHHHHhccc
Confidence 5678887763 3568999999999998752 135999998 789999999999988765544
No 130
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.91 E-value=1.4e-21 Score=194.78 Aligned_cols=312 Identities=15% Similarity=0.150 Sum_probs=213.5
Q ss_pred ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA 147 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~ 147 (494)
+++.+.+++.+.+.. ...|. .++. .++++.+++++++++ ..+++|+|+++++..++.+. .
T Consensus 33 ~p~~~~~a~~~~~~~-~~~Y~-~~~~----~~lr~~ia~~~~~~~-----~~i~it~Ga~~~l~~~~~~~-~-------- 92 (354)
T PRK06358 33 VPESLKQAITENLDK-LVEYP-DPDY----LELRKRIASFEQLDL-----ENVILGNGATELIFNIVKVT-K-------- 92 (354)
T ss_pred CCHHHHHHHHHHHHh-hhcCC-CccH----HHHHHHHHHHhCCCh-----hhEEECCCHHHHHHHHHHHh-C--------
Confidence 356777777776543 22232 2233 346666888888875 45899999999998777654 1
Q ss_pred cCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEeeCCCCcccccC---HHH
Q 011057 148 EGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAILGSTLNGEFED---VKL 223 (494)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~---l~~ 223 (494)
.+.|+++.+.+..+...++..|++++.+++++ +++.+| +++++.+.+++++|++++|+||||.+.+ +++
T Consensus 93 ------~~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~ 165 (354)
T PRK06358 93 ------PKKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKK 165 (354)
T ss_pred ------CCcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHH
Confidence 14689999999999999999999999999874 346788 6666667777899999999999999975 777
Q ss_pred HHHHHHHhhcccCCCceEEEecccccccccccCCccc-c-ccc-CCCceEEEEcCcccCC-cCCceEEEEEeCCCCcccc
Q 011057 224 LNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE-W-DFR-LPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEE 299 (494)
Q Consensus 224 I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~-~~~-~~~~D~~~~~~hK~l~-~p~g~G~~~~~~~~~~~~~ 299 (494)
|.++|+++ ++++++|++|..+.. ...... . ... ..++ .+..++.|.++ ++.++||+++.++......
T Consensus 166 l~~~a~~~------~~~ii~De~Y~~~~~--~~~~~~~~~~~~~~~~v-i~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~ 236 (354)
T PRK06358 166 ILDKCEKR------NIYLIIDEAFMDFLE--ENETISMINYLENFKNL-IIIRAFTKFFAIPGLRLGYGLTSNKNLAEKL 236 (354)
T ss_pred HHHHHHhc------CCEEEEeCcccccCC--CccchhHHHhccCCCCE-EEEEechhhccCcchhheeeecCCHHHHHHH
Confidence 88888999 999999999987642 111000 0 111 1233 44457778775 8899999987543222111
Q ss_pred cccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhH-HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEE
Q 011057 300 LIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEG-YRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAF 378 (494)
Q Consensus 300 ~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f 378 (494)
...... . ..+.++++++...+.... +++..+...+.++++.+.|++++++.+..+ ..+++.+
T Consensus 237 ~~~~~~------------~---~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~g~f~~~ 299 (354)
T PRK06358 237 LQMREP------------W---SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKP--SVNFIFF 299 (354)
T ss_pred HHhCCC------------C---cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC--cceEEEE
Confidence 111100 0 123444555555554433 366777778888999999999876766544 4567777
Q ss_pred EecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 379 SLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 379 ~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
+++. ..+++++|.++|+.+....... ..+..++|++++ +.++.++|+++|++++
T Consensus 300 ~~~~-----~~~~~~~l~~~gI~v~~~~~f~-~~~~~~iRls~~---~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 300 KLEK-----PIDLRKELLKKGILIRSCSNYR-GLDENYYRVAVK---SREDNKKLLKALEVIL 353 (354)
T ss_pred EcCc-----hHHHHHHHHHCCeEEEECCCCC-CCCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 7642 3689999999999885543321 123467999998 6788999999988764
No 131
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=4.8e-22 Score=198.95 Aligned_cols=314 Identities=16% Similarity=0.098 Sum_probs=213.4
Q ss_pred ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA 147 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~ 147 (494)
++|.+.+++.+.++.. .+...++..+ ++++++++++.++ ..+++|+|+++++..++.++.+.
T Consensus 43 ~~~~v~~a~~~~~~~~--~~~p~~g~~~----lr~~ia~~~~~~~-----~~i~~t~G~~~~l~~~~~~~~~~------- 104 (359)
T PRK03158 43 PSPKVKEAIAAHLDEL--ALYPDGYAPE----LRTKVAKHLGVDE-----EQLLFGAGLDEVIQMISRALLNP------- 104 (359)
T ss_pred CCHHHHHHHHHHHHHh--hcCCCCcHHH----HHHHHHHHhCCCH-----HHEEECCCHHHHHHHHHHHHhCC-------
Confidence 5677888887776542 1222234444 5556888888765 35899999999998776665321
Q ss_pred cCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHH
Q 011057 148 EGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDL 227 (494)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~l 227 (494)
++.|+++.++|..+...+...|++++.+++++ +.+|++++++++++++++|++++|+||||.+.+.++|.++
T Consensus 105 ------gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~ 176 (359)
T PRK03158 105 ------GTNTVMAEPTFSQYRHNAIIEGAEVREVPLKD--GGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSF 176 (359)
T ss_pred ------CCEEEEcCCCHHHHHHHHHHcCCeEEEEecCC--CCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 25899999999999999999999999999873 5799999999998889999999999999999999999999
Q ss_pred HHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCC-cCCceEEEEEeCCCCcccccccccCC
Q 011057 228 LAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIFHINY 306 (494)
Q Consensus 228 a~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~G~~~~~~~~~~~~~~~~~~~y 306 (494)
++.... ++++++|++|..+...-..+.....+....-.++..++.|.++ ++.++||++...+ .+ +.+...
T Consensus 177 ~~~~~~----~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~-~~-~~~~~~--- 247 (359)
T PRK03158 177 LESVPS----HVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEE-LI-EKLNIA--- 247 (359)
T ss_pred HHhCCC----CcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHH-HH-HHHHHh---
Confidence 987411 8999999999875421000100001111123455567789875 6678899876432 22 211110
Q ss_pred CCCCCCCcccccCcchHHHHHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCC
Q 011057 307 LGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKR 385 (494)
Q Consensus 307 ~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~ 385 (494)
. . . + ..+.+++.++...+.. +.+++..+...++++++.+.|++.+ +.+..+ ..+++.+.+.
T Consensus 248 ~-~---~--~-----~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~--~g~~i~~~~~---- 309 (359)
T PRK03158 248 R-P---P--F-----NTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPS--QTNFIFVDTG---- 309 (359)
T ss_pred c-C---C--C-----CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCC--cCcEEEEECC----
Confidence 0 0 0 0 1233445555555543 3345555666778888999998884 766533 3456665552
Q ss_pred CCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 386 HDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 386 ~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
.+..++.++|.++|+.+....... ...++|++++ +.+++++++++|+++
T Consensus 310 ~~~~~~~~~l~~~gv~v~~g~~f~---~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 310 RDANELFEALLKKGYIVRSGAALG---FPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred CCHHHHHHHHHHCCeEEeeCCCCC---CCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 357789999999999875533221 2357999987 788899999888875
No 132
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.7e-22 Score=201.24 Aligned_cols=286 Identities=16% Similarity=0.097 Sum_probs=200.3
Q ss_pred HHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCe
Q 011057 98 NRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVE 177 (494)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~ 177 (494)
.++++++++++|+++ ..+++|+|+++++.+++.++... ++++|+++.++|..+...++..|++
T Consensus 60 ~~l~~~~a~~~g~~~-----~~I~~~~Gs~e~i~~~~~~~~~~------------g~~~vli~~P~y~~y~~~~~~~G~~ 122 (351)
T PRK01688 60 KAVIENYAAYAGVKP-----EQVLVSRGADEGIELLIRAFCEP------------GKDAILYCPPTYGMYSVSAETIGVE 122 (351)
T ss_pred HHHHHHHHHHhCCCH-----HHEEEcCCHHHHHHHHHHHhcCC------------CCCEEEEcCCCHHHHHHHHHHcCCE
Confidence 357788999999976 45899999999999888776321 1257999999999999999999999
Q ss_pred eEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCC
Q 011057 178 LKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYP 257 (494)
Q Consensus 178 v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~ 257 (494)
++.++++++ +.+|++++++++ +++++|++++|+||||.+.+.++|.++++..++ +.++++|+||..+... .
T Consensus 123 ~~~v~~~~~-~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~----~~~vivDEay~~f~~~---~ 193 (351)
T PRK01688 123 IRTVPTLDN-WQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRG----KAIVVADEAYIEFCPQ---A 193 (351)
T ss_pred EEEeecCCC-CCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC----CcEEEEECchhhcCCC---C
Confidence 999999765 889999999988 578999999999999999999999888876522 5789999999876411 1
Q ss_pred cccccc-cCCCceEEEEcCcccC-CcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh
Q 011057 258 ELEWDF-RLPLVKSINVSGHKYG-LVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL 335 (494)
Q Consensus 258 ~~~~~~-~~~~~D~~~~~~hK~l-~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l 335 (494)
.....+ ..+++ ++.-++.|++ +++.++|+++... ..+.........|. .+.+++.++...+
T Consensus 194 s~~~~~~~~~n~-iv~rSfSK~~glaGlRiGy~i~~~-~~i~~l~~~~~~~~---------------v~~~~~~~a~~~L 256 (351)
T PRK01688 194 SLAGWLAEYPHL-VILRTLSKAFALAGLRCGFTLANE-EVINLLLKVIAPYP---------------LSTPVADIAAQAL 256 (351)
T ss_pred ChHHHHhhCCCE-EEEecchHhhcCHHHHHhHHhCCH-HHHHHHHhccCCCC---------------CCHHHHHHHHHHH
Confidence 000001 12233 4455777865 4677789988643 22211111111111 1112233333344
Q ss_pred c---HhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCC
Q 011057 336 G---FEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQ 412 (494)
Q Consensus 336 ~---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~ 412 (494)
. .+.+++..+...+.++++.+.|+++++++.+.++ ..+++.+.+. +..++.++|.++||.++...... .
T Consensus 257 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps-~~nfi~~~~~-----~~~~l~~~L~~~gi~vr~~~~~~--~ 328 (351)
T PRK01688 257 SPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDS-ETNYILARFT-----ASSAVFKSLWDQGIILRDQNKQP--G 328 (351)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCC-CCcEEEEEcC-----CHHHHHHHHHHCCeEEEECCCcC--C
Confidence 3 2345666777778889999999998767534443 5677777763 46789999999999986543221 1
Q ss_pred CceEEEEEeccCCChHHHHHHHHHH
Q 011057 413 HITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 413 ~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
...++|++++ +.+++++|+++|
T Consensus 329 ~~~~iRis~~---~~~e~~~l~~al 350 (351)
T PRK01688 329 LSNCLRITIG---TREECQRVIDAL 350 (351)
T ss_pred CCCeEEEeCC---CHHHHHHHHHhh
Confidence 2357999998 779999988876
No 133
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.90 E-value=5e-22 Score=186.16 Aligned_cols=332 Identities=14% Similarity=0.065 Sum_probs=238.6
Q ss_pred ChHHHHHHHHHHhcccCCCCCCCh---hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHH
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYP---VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNK 144 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~ 144 (494)
.+|.+.+++.+.++..+.+.+..+ +......+++..||+|.+-+. .++.++..-||-..+..+.+..
T Consensus 186 ~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~a-------ALlFsSCfVANDstLftLak~l--- 255 (570)
T KOG1360|consen 186 RHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEA-------ALLFSSCFVANDSTLFTLAKKL--- 255 (570)
T ss_pred CChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcc-------eeeeeeeeeccchHHHHHHHHC---
Confidence 478999999999988654333222 333344445555999999875 5566666666665554443321
Q ss_pred HHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh----CCeEEEEeeCCCCcccccC
Q 011057 145 RKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE----NTICVAAILGSTLNGEFED 220 (494)
Q Consensus 145 ~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~t~~vv~~~~~~~tG~~~~ 220 (494)
.+.+|+.++..|.|+....+-.++.-..+. +.|+++|+++++. .|++|..-.+.+++|.+.|
T Consensus 256 --------pgcei~SD~gNHASMI~GIrns~v~K~IFr------HND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp 321 (570)
T KOG1360|consen 256 --------PGCEIFSDEGNHASMIQGIRNSRVPKHIFR------HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP 321 (570)
T ss_pred --------CCcEEeccccchHHHHHHhhhcCCcceeec------cCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC
Confidence 124677788899999988888777655555 4688888888875 3688999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCceEEEecccccccc-cccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccc
Q 011057 221 VKLLNDLLAEKNKETGWDTPIHVDAASGGFIA-PFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEE 299 (494)
Q Consensus 221 l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~ 299 (494)
|+||++++++| |++.++|++|+.|.. +......+.+--+..+|.|+.+.-|.+++- |..+......+
T Consensus 322 leelcDvah~y------GAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcV---GGYIAat~~Lv--- 389 (570)
T KOG1360|consen 322 LEELCDVAHKY------GAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCV---GGYIAATRKLV--- 389 (570)
T ss_pred HHHHHHHHHHh------CceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhcccc---cceehhhhhHH---
Confidence 99999999999 999999999986542 111111111212457899999999976432 33333332222
Q ss_pred cccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEE
Q 011057 300 LIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAF 378 (494)
Q Consensus 300 ~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f 378 (494)
+++.+....|.+..+.|+....++..+++.+.. +| +..++...++.+|+++.|.++| +.++..+ ..|+.+
T Consensus 390 -----DmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg-~~lR~~hqrnv~~~kq~l~~~G-iPVi~~p--SHIiPv 460 (570)
T KOG1360|consen 390 -----DMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEG-RVLRRQHQRNVKYVKQLLMELG-IPVIPNP--SHIIPV 460 (570)
T ss_pred -----HHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHHcC-CcccCCC--cceeee
Confidence 334444455666677777778888888888854 44 3445556778899999999997 8888775 478888
Q ss_pred EecCCCCCCHHHHHHHH-HhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 379 SLKDNKRHDEFEVAELL-RRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 379 ~~~~~~~~~~~~l~~~L-~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
++.+. .-...+.+.| .+.||++.+.-+|++..|...+|++-++++|++.++.|+++|..+|+++.-
T Consensus 461 ~vgda--~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~l 527 (570)
T KOG1360|consen 461 RVGDA--ALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVGL 527 (570)
T ss_pred eccCH--HHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 87442 2244566654 467999999999999999999999999999999999999999999998764
No 134
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.90 E-value=3.8e-21 Score=195.24 Aligned_cols=346 Identities=16% Similarity=0.096 Sum_probs=223.3
Q ss_pred CCCcccccccC-----CChHHHHHHHHHHhcccC-CCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHH
Q 011057 56 PRLNLASFVTT-----WMEPECDKLMMAAINKNY-VDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEA 129 (494)
Q Consensus 56 ~~~~~~~~~~~-----~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a 129 (494)
..++|..+.+. ++++.+.+++.+++.... ..|...++..++++.+.+++.+. |.+. +...+++|+|++++
T Consensus 32 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~---~~~~i~~t~G~~~a 107 (401)
T TIGR01264 32 PMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPI---EADDVVLCSGCSHA 107 (401)
T ss_pred CeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCC---CHHHEEECcChHHH
Confidence 33566665553 455678888887776532 34555567777777766666542 3222 12358899999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEE
Q 011057 130 IMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAA 208 (494)
Q Consensus 130 ~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~ 208 (494)
+.+++.++... +++|+++.++|..+...++..|++++.++++. +++.+|+++|++++.+++++|++
T Consensus 108 l~~~~~~l~~~-------------gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~ 174 (401)
T TIGR01264 108 IEMCIAALANA-------------GQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIV 174 (401)
T ss_pred HHHHHHHhCCC-------------CCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEE
Confidence 99888776321 25799999999999999999999999998863 24789999999999888899999
Q ss_pred eeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccC-CCc-eEEEEcCcc-cCCcC
Q 011057 209 ILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL-PLV-KSINVSGHK-YGLVY 282 (494)
Q Consensus 209 ~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~-~~~-D~~~~~~hK-~l~~p 282 (494)
++++||||.+.+ +++|+++|+++ ++++++|++|..+.. ........... ... -++..++.| |++++
T Consensus 175 ~~p~NPtG~~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G 246 (401)
T TIGR01264 175 NNPSNPCGSVFSRQHLEEILAVAERQ------CLPIIADEIYGDMVF--SGATFEPLASLSSTVPILSCGGLAKRWLVPG 246 (401)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEhhhhhhcc--CCcccccHHHcCCCCcEEEEccCcccCCCcc
Confidence 999999999954 78899999999 999999999987542 11000000011 111 345667888 58888
Q ss_pred CceEEEEEeCCC-CcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc---HhHHHHHHHHHHHHHHHHHHHH
Q 011057 283 AGIGWVIWRNKE-DLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG---FEGYRNVMENCHENAMVLKEGL 358 (494)
Q Consensus 283 ~g~G~~~~~~~~-~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~---~~g~~~~~~~~~~~a~~l~~~L 358 (494)
.++||+++.++. .+.........+. .. . .. .+.+.+.++...+. .+.+++..+.+.++++++.+.|
T Consensus 247 lRiG~iv~~~~~~~~~~~~~~~~~~~-~~--~----~~---~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L 316 (401)
T TIGR01264 247 WRLGWIIIHDRRGILRDIRDGLVKLS-QR--I----LG---PCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGAL 316 (401)
T ss_pred ceEEEEEecCcchhHHHHHHHHHHHh-hc--c----CC---CCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999976432 1111110000000 00 0 00 11223333333332 3456667777888888999999
Q ss_pred hhCCCeEEeecCCCccEEEEEecC---CCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHH
Q 011057 359 EKTGRFNIVSKDEGVPLVAFSLKD---NKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLV 434 (494)
Q Consensus 359 ~~~~~~~~~~~~~~~~~v~f~~~~---~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i 434 (494)
++++++....+. ..+++.+.+.. +...+..++.++|. ++|+.+....... ...++|++++. ..++++..+
T Consensus 317 ~~~~~~~~~~p~-~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~---~~~~iRis~~~--~~~~l~~~l 390 (401)
T TIGR01264 317 AAVPGLRPVMPS-GAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFE---YPGFFRVVLTV--PVVMMEEAC 390 (401)
T ss_pred HhCCCCcccCCC-eeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcC---CCCeEEEEEcC--CHHHHHHHH
Confidence 998666654443 45566666532 11235678888875 7899875432221 23589999974 456666555
Q ss_pred HHHHHHHH
Q 011057 435 LDITKVLH 442 (494)
Q Consensus 435 ~~l~~~~~ 442 (494)
+.|.++++
T Consensus 391 ~rl~~~~~ 398 (401)
T TIGR01264 391 SRIQEFCE 398 (401)
T ss_pred HHHHHHHh
Confidence 55555543
No 135
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.90 E-value=1.5e-21 Score=196.45 Aligned_cols=332 Identities=11% Similarity=0.006 Sum_probs=212.1
Q ss_pred ChHHHHHHHHHHhcccCCCCCCCh---hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHH
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYP---VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNK 144 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~ 144 (494)
.+|.+.+++.+++++...+...++ +......++++.+|+++|.+. .++.++|+.++..++.+..+
T Consensus 13 ~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~-------al~~~sG~~a~~~~i~~l~~----- 80 (392)
T PLN03227 13 SSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTES-------AILYSDGASTTSSTVAAFAK----- 80 (392)
T ss_pred CCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCc-------EEEecCcHHHHHHHHHHhCC-----
Confidence 478888888888877444333322 223456667788999999975 67777787887766665522
Q ss_pred HHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhh-----------hCCeEEEEeeCCC
Q 011057 145 RKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVD-----------ENTICVAAILGST 213 (494)
Q Consensus 145 ~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-----------~~t~~vv~~~~~~ 213 (494)
.+++|++++..|.++...+...+++++.++..+ .-|++.+.+.+. +++++|++..+.+
T Consensus 81 --------~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d---~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~ 149 (392)
T PLN03227 81 --------RGDLLVVDRGVNEALLVGVSLSRANVRWFRHND---MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYK 149 (392)
T ss_pred --------CCCEEEEeccccHHHHHHHHHcCCeEEEeCCCC---HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcC
Confidence 136899999999999988888888877776532 123444444443 2577888888888
Q ss_pred CcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc---CCCceEEEEcCcccCCcCCceEEEEE
Q 011057 214 LNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR---LPLVKSINVSGHKYGLVYAGIGWVIW 290 (494)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~---~~~~D~~~~~~hK~l~~p~g~G~~~~ 290 (494)
++|.+.|+++|.++|+++ |+++++|++|+.+............++ ..++|.++.+.+|.++ |.| |+++.
T Consensus 150 ~~G~i~~l~~i~~l~~~~------g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~g-g~v~~ 221 (392)
T PLN03227 150 NTGTLAPLKELVALKEEF------HYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SVG-GMTVG 221 (392)
T ss_pred CCCcccCHHHHHHHHHHc------CCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh-ccC-cEEec
Confidence 999999999999999999 999999999984432110001111111 2467999999999864 332 44443
Q ss_pred eCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEE----
Q 011057 291 RNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNI---- 366 (494)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~---- 366 (494)
+ +... +.+.. + ....++.++.++....+..+++..+.. .+++.++..++.++|+++|++.+ +..
T Consensus 222 ~-~~~~-~~~~~---~----~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~ 289 (392)
T PLN03227 222 S-EEVV-DHQRL---S----GSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSS-HPYALKL 289 (392)
T ss_pred C-HHHH-HHHHH---h----CcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcC-Ccccccc
Confidence 3 2222 11110 0 011122222222233333333433222 24678888999999999998642 321
Q ss_pred ------eecCCCccEEEEEecCCCC-------CCHHHHHHHHHhcCceeeccc------cCCCCCCceEEEEEeccCCCh
Q 011057 367 ------VSKDEGVPLVAFSLKDNKR-------HDEFEVAELLRRFGWIVPAYT------MPADAQHITVLRVVIREDFSR 427 (494)
Q Consensus 367 ------~~~~~~~~~v~f~~~~~~~-------~~~~~l~~~L~~~Gi~v~~~~------~~~~~~~~~~lRvs~~~~~t~ 427 (494)
.... ..+++.+.+.+... .....+.++|.++|+++.... .|.. ....+|++++..+|+
T Consensus 290 rg~~~~~~~~-~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~--P~~~iR~~~~~~~t~ 366 (392)
T PLN03227 290 RNRLVITSDP-ISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLV--PPPCLRVVANASHTR 366 (392)
T ss_pred ccccccCCCC-CCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCC--CCceEEEEecCCCCH
Confidence 1111 46788888743110 012488899999999874311 1222 235799999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 011057 428 TLAERLVLDITKVLHELD 445 (494)
Q Consensus 428 ~~id~~i~~l~~~~~~l~ 445 (494)
+|+|++++.|+++++.+.
T Consensus 367 eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 367 EDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998763
No 136
>PRK07777 aminotransferase; Validated
Probab=99.90 E-value=3.3e-21 Score=194.83 Aligned_cols=342 Identities=14% Similarity=0.053 Sum_probs=221.6
Q ss_pred CCcccccccCCC-hHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHH
Q 011057 57 RLNLASFVTTWM-EPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGL 135 (494)
Q Consensus 57 ~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~ 135 (494)
.++|..+.+... ++.+.+.+.+++......|...++..++++.+.+++.+.+|.+.+. ...+++|+|+++|+.+++.
T Consensus 26 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~~i~~t~G~~~al~~~~~ 103 (387)
T PRK07777 26 AVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDP--DTEVLVTVGATEAIAAAVL 103 (387)
T ss_pred eEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEeCCcHHHHHHHHH
Confidence 355555554432 3456666666665544556666788899999999998888886421 1248899999999987776
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCC--ccccCHHHHHHhhhhCCeEEEEeeCCC
Q 011057 136 AFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEG--YYVMDPVKAVEMVDENTICVAAILGST 213 (494)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~--~~~~d~~~L~~~i~~~t~~vv~~~~~~ 213 (494)
+... .+++|+++.+.|..+..+++..|..++.++++++ ++.+|+++|++++.+++++|++++++|
T Consensus 104 ~~~~-------------~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~N 170 (387)
T PRK07777 104 GLVE-------------PGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHN 170 (387)
T ss_pred HhcC-------------CCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCC
Confidence 5522 1258999999999999999999999999998753 467999999999988899999999999
Q ss_pred Cccccc---CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCc-ccc-cc-cCCCceEEEEcCcccCC-cCCceE
Q 011057 214 LNGEFE---DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPE-LEW-DF-RLPLVKSINVSGHKYGL-VYAGIG 286 (494)
Q Consensus 214 ~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~-~~-~~~~~D~~~~~~hK~l~-~p~g~G 286 (494)
|||.+. ++++|.++|+++ ++++++|++|+.+.. .... ... .+ ...+.+++..+++|.+. ++.++|
T Consensus 171 PtG~~~~~~~~~~l~~~~~~~------~~~li~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 242 (387)
T PRK07777 171 PTGTVLTAAELAAIAELAVEH------DLLVITDEVYEHLVF--DGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIG 242 (387)
T ss_pred CCCccCCHHHHHHHHHHHHhc------CcEEEEeccchhccc--CCCCcccHhhCCCCcCcEEEEeechhhccCcCceeE
Confidence 999985 488899999999 999999999986532 1110 010 11 12345778889999875 667789
Q ss_pred EEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEE
Q 011057 287 WVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNI 366 (494)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 366 (494)
+++...+ .+ ..+.....+... ..+. ....++..++. .+...+++..+.+.++++++.+.|++.+ +++
T Consensus 243 ~~~~~~~-l~-~~~~~~~~~~~~-------~~~~--~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~ 309 (387)
T PRK07777 243 WACGPAP-LI-AAVRAAKQYLTY-------VGGA--PFQPAVAHALD-HEDAWVAALRDSLQAKRDRLAAGLAEAG-FEV 309 (387)
T ss_pred EEecCHH-HH-HHHHHHHhhccc-------CCCC--HHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhCC-CCc
Confidence 9876432 22 111111111100 0111 11111112221 1234455667778889999999999875 776
Q ss_pred eecCCCccEEE-EEecCCCCCCHHHHHHHHH-hcCceeecccc--CCCCCCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 367 VSKDEGVPLVA-FSLKDNKRHDEFEVAELLR-RFGWIVPAYTM--PADAQHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 367 ~~~~~~~~~v~-f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~--~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
..+. .+++. +.+++....+..++++.|. +.|+.+..... +....+...+|+++.. ..++++..++.|+
T Consensus 310 ~~~~--g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~--~~~~l~~~l~~l~ 381 (387)
T PRK07777 310 HDSA--GTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK--RDDTLDEAIRRLR 381 (387)
T ss_pred cCCC--cceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 5442 34444 4543211236789999996 57998754321 1112234689999974 4555544444443
No 137
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.90 E-value=6.1e-21 Score=192.62 Aligned_cols=328 Identities=15% Similarity=0.045 Sum_probs=215.7
Q ss_pred CCCCCcccccccCC-ChHHHHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHH
Q 011057 54 GNPRLNLASFVTTW-MEPECDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIM 131 (494)
Q Consensus 54 ~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~ 131 (494)
+...+.|+.+.+.. +++.+.+++.+++... ...|....+..++++.+.+++++.+|.+.+. ...+++|+|+++++.
T Consensus 28 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~--~~~vi~t~G~~~~l~ 105 (383)
T TIGR03540 28 GVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDP--ETEVLSLIGSKEGIA 105 (383)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC--CCeEEECCCcHHHHH
Confidence 33345556555543 3566778887766532 2345555577889989889888877875321 123778899999998
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEee
Q 011057 132 LAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAIL 210 (494)
Q Consensus 132 ~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~ 210 (494)
.++.++.. .++.|+++.++|..+...++..|++++.+|+++ +++.+|++++++++.+++++|++++
T Consensus 106 ~~~~~~~~-------------~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~ 172 (383)
T TIGR03540 106 HIPLAFVN-------------PGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINY 172 (383)
T ss_pred HHHHHhCC-------------CCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeC
Confidence 87776532 136899999999999999999999999999974 3467899999999988899999999
Q ss_pred CCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccc-cCCcccccc-cCCCceEEEEcCcccC-CcCCc
Q 011057 211 GSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF-LYPELEWDF-RLPLVKSINVSGHKYG-LVYAG 284 (494)
Q Consensus 211 ~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~-~~~~~~~~~-~~~~~D~~~~~~hK~l-~~p~g 284 (494)
|+||||.+.+ +++|+++|+++ ++++++|++|+.+...- ..+... .+ ......+...++.|.+ .++.+
T Consensus 173 P~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~l~~~~~~~~~~~-~~~~~~~~~i~~~SfSK~~g~~GlR 245 (383)
T TIGR03540 173 PNNPTGAVAPLKFFKELVEFAKEY------NIIVCHDNAYSEITFDGYKAPSFL-EVDGAKDVGIEFHSLSKTYNMTGWR 245 (383)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHc------CEEEEEecchhhhccCCCCCcCcc-cCCCcccCEEEEEecccccCCccce
Confidence 9999999977 68889999999 99999999998643210 001000 11 1112335556777987 46677
Q ss_pred eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh--cHhHHHHHHHHHHHHHHHHHHHHhhCC
Q 011057 285 IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL--GFEGYRNVMENCHENAMVLKEGLEKTG 362 (494)
Q Consensus 285 ~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l--~~~g~~~~~~~~~~~a~~l~~~L~~~~ 362 (494)
+||++... ..+ ..+.....+... +. ....+.++...+ +.+.+++..+.+.++++++.+.|++.+
T Consensus 246 iG~~i~~~-~l~-~~~~~~~~~~~~--------~~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 311 (383)
T TIGR03540 246 IGMAVGNA-DLI-AGLGKVKTNVDS--------GV----FQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIG 311 (383)
T ss_pred eeEEeCCH-HHH-HHHHHHHHhccc--------CC----ChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99987533 222 211110001000 11 112233333333 234456667777888999999999985
Q ss_pred CeEEeecCCCccEEEEEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEec
Q 011057 363 RFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIR 422 (494)
Q Consensus 363 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~ 422 (494)
+.+..+. ...++.+.++ .+++..+++++|. ++|+.+....... ..+..++|++++
T Consensus 312 -~~~~~~~-~~~~~~~~l~--~~~~~~~~~~~ll~~~gi~v~~g~~f~-~~~~~~~Ris~~ 367 (383)
T TIGR03540 312 -IDVEKPK-ATFYVWVPVP--EGYTSAEFAARLLEETGVVVTPGVGFG-EYGEGYIRISLT 367 (383)
T ss_pred -CEecCCC-cceEEEEECC--CCCCHHHHHHHHHHHCCEEEecchhhC-ccCCCeEEEEec
Confidence 7766443 3333555653 2467888999875 6899876443221 123468999997
No 138
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.90 E-value=5.6e-21 Score=193.65 Aligned_cols=345 Identities=14% Similarity=0.026 Sum_probs=222.4
Q ss_pred CCCCCcccccccCCC-hHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCC-CCCCCCcceeeecChhHHHH
Q 011057 54 GNPRLNLASFVTTWM-EPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAP-LEDSETAVGVGTVGSSEAIM 131 (494)
Q Consensus 54 ~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~ggt~a~~ 131 (494)
+.+.++|..+.++.+ ++.+.+++.+.+. ....|....+..++++.+.+++.+.+|.+ .+. ...+++|+|+++++.
T Consensus 28 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~--~~~i~it~G~~~al~ 104 (396)
T PRK09147 28 DLPPISLSIGEPKHPTPAFIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDP--ATQVLPVNGSREALF 104 (396)
T ss_pred CCCeEecCCCCCCCCCCHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCc--cceEEECCChHHHHH
Confidence 455566666555543 5667888877665 33456556678889999999998888865 321 125888999999998
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEee
Q 011057 132 LAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAIL 210 (494)
Q Consensus 132 ~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~ 210 (494)
+++.++... +..++.|+++.+.+..+..+++..|++++.||+++ +++.+|+++|++.+.+++++|++++
T Consensus 105 ~~~~~l~~~----------~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~n 174 (396)
T PRK09147 105 AFAQTVIDR----------DGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCS 174 (396)
T ss_pred HHHHHHcCC----------CCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcC
Confidence 888776331 01135799999999999999999999999999974 3468999999988888899999999
Q ss_pred CCCCccccc---CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc-c----cccCC--CceEEEEcCcc-cC
Q 011057 211 GSTLNGEFE---DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE-W----DFRLP--LVKSINVSGHK-YG 279 (494)
Q Consensus 211 ~~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~----~~~~~--~~D~~~~~~hK-~l 279 (494)
|+||||.+. .+++|+++|+++ ++++++|++|+.+...-..+... . ..... .--.+..++.| ++
T Consensus 175 P~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 248 (396)
T PRK09147 175 PGNPTGAVLPLDDWKKLFALSDRY------GFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSN 248 (396)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHc------CeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccC
Confidence 999999995 467788888999 99999999998764210001000 0 00000 11255567888 67
Q ss_pred CcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc-HhHHHHHHHHHHHHHHHHHHHH
Q 011057 280 LVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-FEGYRNVMENCHENAMVLKEGL 358 (494)
Q Consensus 280 ~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~-~~g~~~~~~~~~~~a~~l~~~L 358 (494)
+++.++||++..+ ..+ +.+.....+.. .. .+.+.+.+++..+. .+.+++..+.+.+.++.+.+.|
T Consensus 249 ~~GlRiG~~~~~~-~l~-~~~~~~~~~~~---------~~---~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 314 (396)
T PRK09147 249 VPGLRSGFVAGDA-ALL-KKFLLYRTYHG---------CA---MPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPIL 314 (396)
T ss_pred CccceeeeecCCH-HHH-HHHHHHhhhcc---------cC---CCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 8889999987543 222 21111111110 01 11223333333332 3345666777778888888888
Q ss_pred hhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHH-hcCceeeccccCC-----CCCCceEEEEEeccCCChHHHHH
Q 011057 359 EKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPA-----DAQHITVLRVVIREDFSRTLAER 432 (494)
Q Consensus 359 ~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~-----~~~~~~~lRvs~~~~~t~~~id~ 432 (494)
++. +.+..+ ....++.++++ .+..+++++|. ++|+.+....... ...+..++|+++.. +.++++.
T Consensus 315 ~~~--~~~~~p-~~g~f~~~~~~----~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--~~~~l~~ 385 (396)
T PRK09147 315 APV--LDVQLP-DAGFYLWAKVP----GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--PLAECVE 385 (396)
T ss_pred HHh--cCCCCC-CeeEEEEEECC----CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC--CHHHHHH
Confidence 774 443333 24556666663 25678888875 6799875432211 01235689999874 3555554
Q ss_pred HHHHHHHH
Q 011057 433 LVLDITKV 440 (494)
Q Consensus 433 ~i~~l~~~ 440 (494)
.++.|+++
T Consensus 386 ~l~rl~~~ 393 (396)
T PRK09147 386 AAERIVDF 393 (396)
T ss_pred HHHHHHHH
Confidence 44444443
No 139
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.90 E-value=5.3e-21 Score=193.25 Aligned_cols=328 Identities=17% Similarity=0.079 Sum_probs=214.7
Q ss_pred CCCCCcccccccCC-ChHHHHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHH
Q 011057 54 GNPRLNLASFVTTW-MEPECDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIM 131 (494)
Q Consensus 54 ~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~ 131 (494)
+.+.+++..+.++. +++.+.+++.+++... ...|....+..++++.+.+++.+.+|.+.+. ...+++|+|+++++.
T Consensus 30 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~~ii~t~G~~~~i~ 107 (385)
T PRK09276 30 GVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDP--ETEVISLIGSKEGIA 107 (385)
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEccCcHHHHH
Confidence 33445556555443 3567888888777542 2334444567888888888888777864321 113778899999998
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEee
Q 011057 132 LAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAIL 210 (494)
Q Consensus 132 ~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~ 210 (494)
.++.++.. .++.|++++++|+.+...++..|++++.+++++ +++.+|++++++.+.+++++|++++
T Consensus 108 ~~~~~~~~-------------~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~ 174 (385)
T PRK09276 108 HIPLAFVN-------------PGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINY 174 (385)
T ss_pred HHHHHhCC-------------CCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeC
Confidence 87776632 136899999999999999999999999999864 3467899999998888899999999
Q ss_pred CCCCcccccC---HHHHHHHHHHhhcccCCCceEEEeccccccccc-ccCCcccccc-cCCCceEEEEcCcccC-CcCCc
Q 011057 211 GSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAP-FLYPELEWDF-RLPLVKSINVSGHKYG-LVYAG 284 (494)
Q Consensus 211 ~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~-~~~~~~~~~~-~~~~~D~~~~~~hK~l-~~p~g 284 (494)
|+||||.+.+ +++|+++|+++ ++++++|++|+.+... ...+... .+ ......++..++.|.+ .++.+
T Consensus 175 p~NPtG~~~~~~~~~~l~~~~~~~------~~~ii~De~y~~~~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~g~~GlR 247 (385)
T PRK09276 175 PNNPTGAVADLEFFEEVVDFAKKY------DIIVCHDAAYSEIAYDGYKPPSFL-EVPGAKDVGIEFHSLSKTYNMTGWR 247 (385)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHC------CcEEEEecchhheecCCCCCCChh-ccCCCcCCEEEEecchhhcCCcchh
Confidence 9999999977 57888889999 9999999999875421 0000000 11 1112345556777977 56777
Q ss_pred eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc--HhHHHHHHHHHHHHHHHHHHHHhhCC
Q 011057 285 IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--FEGYRNVMENCHENAMVLKEGLEKTG 362 (494)
Q Consensus 285 ~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~--~~g~~~~~~~~~~~a~~l~~~L~~~~ 362 (494)
+||++..+ ..+ +.+.....+... +. ..+.+.++...+. ...+++..+.+.++++++.+.|++.+
T Consensus 248 iG~~i~~~-~l~-~~~~~~~~~~~~--------~~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 313 (385)
T PRK09276 248 IGFAVGNA-DLI-AGLGKVKSNVDS--------GV----FQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKLG 313 (385)
T ss_pred heeeeCCH-HHH-HHHHHHHhhccC--------CC----CHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99997543 222 221111111100 11 1122333344442 34456667777888899999999984
Q ss_pred CeEEeecCCCccEEEEEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEec
Q 011057 363 RFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIR 422 (494)
Q Consensus 363 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~ 422 (494)
+++..+. ...++.+.++ ...+..++.++|. ++|+.+....... ..+..++|+++.
T Consensus 314 -~~~~~~~-~~~~~~v~~~--~~~~~~~l~~~ll~~~gi~v~~g~~f~-~~~~~~~Ris~~ 369 (385)
T PRK09276 314 -LEVEPPK-ATFYVWAPVP--KGYTSAEFATLLLDKAGVVVTPGNGFG-EYGEGYFRIALT 369 (385)
T ss_pred -CcccCCC-cceEEEEECC--CCCCHHHHHHHHHHhCCEEECCchhhC-CCCCCeEEEEeC
Confidence 7765442 2333555553 2457888998876 5799875433221 122458999997
No 140
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=6.8e-21 Score=178.15 Aligned_cols=338 Identities=17% Similarity=0.150 Sum_probs=223.4
Q ss_pred hHHHHHHHHHHhcccCC-CCCCChhhHHHHHHHHHHHHHHhCCCCCCC-CCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 011057 69 EPECDKLMMAAINKNYV-DMDEYPVTTELQNRCVNIIARLFNAPLEDS-ETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 69 ~p~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~-~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
.+++.+++.+++..+.+ +|..+.|...-+++ +|+++.-+.+.. +...+++|+|.++|+.+++.++.++
T Consensus 80 s~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~A----VAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p------ 149 (447)
T KOG0259|consen 80 SQEAEQAVVDALRSGKGNGYAPSVGILPARRA----VAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANP------ 149 (447)
T ss_pred CHHHHHHHHHHHhcCCCCCcCCccccHHHHHH----HHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCC------
Confidence 46788888888887654 46777777765555 666644433221 3345999999999999999888542
Q ss_pred hcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEecc-CCccccCHHHHHHhhhhCCeEEEEeeCCCCcccc---cCHH
Q 011057 147 AEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS-EGYYVMDPVKAVEMVDENTICVAAILGSTLNGEF---EDVK 222 (494)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~---~~l~ 222 (494)
+.+|++|.+.++-+...|...|++|+.+++- +.+|.+|++.++++++++|.++++.+|+||+|.+ +.|+
T Consensus 150 -------~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~ 222 (447)
T KOG0259|consen 150 -------GANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLK 222 (447)
T ss_pred -------CCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHH
Confidence 2589999999999999999999999999874 4569999999999999999999999999999998 5699
Q ss_pred HHHHHHHHhhcccCCCceEEEecccccccccccCCccc-cccc-CCCceEEEEcCcccCCcCCceEEEEEeCCCCccccc
Q 011057 223 LLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE-WDFR-LPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEEL 300 (494)
Q Consensus 223 ~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~-~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~ 300 (494)
+|+++|+++ ++.++.|++|+..+.+ ..+-.+ ..|. .--+-++..-++.|+-++|++||+++.++.-.-...
T Consensus 223 kiae~A~kl------gi~vIaDEVY~~~vfg-~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~ 295 (447)
T KOG0259|consen 223 KIAETAKKL------GIMVIADEVYGHTVFG-DKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDT 295 (447)
T ss_pred HHHHHHHHh------CCeEEehhhcceeecC-CCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccch
Confidence 999999999 9999999999976531 111111 0111 111333333466799999999999998875331110
Q ss_pred c---cccCCCCCCCCCcccccCcchHHH-HHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEE
Q 011057 301 I---FHINYLGADQPTFTLNFSKGSSQV-IAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLV 376 (494)
Q Consensus 301 ~---~~~~y~~~~~~~~~~~~s~~~~~~-~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v 376 (494)
. ....++.-. ..+...+ .++-.-|..-.++-+.+...-+..+++...++|+++|++.....|.+....
T Consensus 296 ~~~q~~~~~~~~~--------~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~myl 367 (447)
T KOG0259|consen 296 KVVQGIKNFLDII--------PGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYL 367 (447)
T ss_pred HHHHHHHHHHhcc--------CCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEE
Confidence 0 001111100 0111111 222233344456778888888999999999999999988855555444444
Q ss_pred EEEecCC---CCCCHHHHHHHHHhcCceeeccccCCCC-CCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 377 AFSLKDN---KRHDEFEVAELLRRFGWIVPAYTMPADA-QHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 377 ~f~~~~~---~~~~~~~l~~~L~~~Gi~v~~~~~~~~~-~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
.+.+.-. +-.|..+++++|.++.-++ ..|+.. .-.+++|+++.. ..+.++...+.|++..++
T Consensus 368 mv~l~~s~~~~~~dD~dFc~kL~~Eesv~---~LPG~af~~~nw~Ri~i~~--~~~~leea~~Rik~Fc~R 433 (447)
T KOG0259|consen 368 MVKLNLSLFPDIEDDVDFCQKLAREESVI---CLPGQAFGLKNWLRIVITV--EEEMLEEAFSRIKEFCDR 433 (447)
T ss_pred EeccchhhhccccccHHHHHHHhhhcceE---EeccccccCCCeEEEEEcc--ChHHHHHHHHHHHHHHHh
Confidence 3333211 1123457888887554332 223322 346789999874 334454444444444443
No 141
>PRK09265 aminotransferase AlaT; Validated
Probab=99.90 E-value=5.3e-21 Score=194.28 Aligned_cols=351 Identities=14% Similarity=0.020 Sum_probs=215.2
Q ss_pred cCCCCCcccccccC----CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHh--CCCCCCCCCcceeeecCh
Q 011057 53 DGNPRLNLASFVTT----WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLF--NAPLEDSETAVGVGTVGS 126 (494)
Q Consensus 53 ~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~--g~~~~~~~~~~~~~t~gg 126 (494)
.+.+.++|..+.+. ++++.+.+.+.+.+.. ...|....+..++++.+.+++.... ++++ ..+++|+|+
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-----~~i~~t~G~ 104 (404)
T PRK09265 31 EGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPT-AQGYSDSKGLFSARKAIMQYYQQKGIPDVDV-----DDIYIGNGV 104 (404)
T ss_pred cCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCCCcHHHHHHHHHHHhccCCCCCCc-----ccEEEeCCh
Confidence 34444555554332 2345666666665543 3445555566677666555554321 3433 358899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeE
Q 011057 127 SEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTIC 205 (494)
Q Consensus 127 t~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~ 205 (494)
++++.+++.++.. .+++|++++++|..+..+++..|+.++.++++. +++.+|++++++++.+++++
T Consensus 105 ~~~l~~~~~~~~~-------------~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~ 171 (404)
T PRK09265 105 SELIVMAMQALLN-------------NGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKA 171 (404)
T ss_pred HHHHHHHHHHhCC-------------CCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceE
Confidence 9999877776632 125899999999999999999999998888763 34779999999999888999
Q ss_pred EEEeeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc-CCCceEEE-EcCcccC-
Q 011057 206 VAAILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSIN-VSGHKYG- 279 (494)
Q Consensus 206 vv~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~D~~~-~~~hK~l- 279 (494)
|++++|+||||.+.+ +++|+++|+++ ++++++|++|+.+.. .......-.. .....+++ .++.|.+
T Consensus 172 v~l~~P~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 243 (404)
T PRK09265 172 IVIINPNNPTGAVYSKELLEEIVEIARQH------NLIIFADEIYDKILY--DGAVHISIASLAPDLLCVTFNGLSKAYR 243 (404)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHC------CCEEEEehhhhhccC--CCCCcCCHHHcCCCceEEEEecchhhcc
Confidence 999999999999988 88899999999 999999999987532 1110000001 11222333 4557876
Q ss_pred CcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH-hHHHHH---HHHHHHHHHHHH
Q 011057 280 LVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNV---MENCHENAMVLK 355 (494)
Q Consensus 280 ~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~---~~~~~~~a~~l~ 355 (494)
+++.++||+++..+..+...+.......... . .. .+.+++.++..+++. +.+.+. .++..+.++++.
T Consensus 244 ~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~--~----~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~ 314 (404)
T PRK09265 244 VAGFRVGWMVLSGPKKHAKGYIEGLDMLASM--R----LC---ANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAW 314 (404)
T ss_pred CcccceEEEEEeCchHHHHHHHHHHHHHhcc--c----cC---CCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHH
Confidence 7788999998753322111000000000000 0 00 112234444444432 112222 235666778899
Q ss_pred HHHhhCCCeEEeecCCCccEEEEEecCCC-C-C-CHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHH
Q 011057 356 EGLEKTGRFNIVSKDEGVPLVAFSLKDNK-R-H-DEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAER 432 (494)
Q Consensus 356 ~~L~~~~~~~~~~~~~~~~~v~f~~~~~~-~-~-~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~ 432 (494)
+.|++++++++..+. ...++.++++... + . +.+.+.+.|.++|+.+....... ..+..++|+++. .+.++++.
T Consensus 315 ~~L~~~~~~~~~~p~-~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~-~~~~~~~Ri~~~--~~~e~l~~ 390 (404)
T PRK09265 315 ELLNAIPGVSCVKPK-GALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFN-WPEPDHFRIVTL--PRVDDLEE 390 (404)
T ss_pred HHHhcCCCCcccCCC-cceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhC-CCCCCeEEEEeC--CCHHHHHH
Confidence 999888667655443 3344444664311 0 1 23457778889999875432221 123467999995 46777877
Q ss_pred HHHHHHHHHHH
Q 011057 433 LVLDITKVLHE 443 (494)
Q Consensus 433 ~i~~l~~~~~~ 443 (494)
.++.|+++++.
T Consensus 391 ~l~rl~~~l~~ 401 (404)
T PRK09265 391 AIGRIGRFLSG 401 (404)
T ss_pred HHHHHHHHHHH
Confidence 77777776653
No 142
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.90 E-value=2.2e-21 Score=194.81 Aligned_cols=329 Identities=10% Similarity=0.036 Sum_probs=217.6
Q ss_pred HHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcC
Q 011057 70 PECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEG 149 (494)
Q Consensus 70 p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g 149 (494)
+...+++.+++..+... ..|...++| +.+++++|.+. +++++|||+|+.+++.++.-
T Consensus 14 ~~e~~~~~~~l~~~~~~--~g~~~~~le----~~la~~~g~~~-------~v~~~sgt~al~lal~al~~---------- 70 (379)
T PRK11658 14 DEELAAVKEVLRSGWIT--TGPKNQALE----QAFCQLTGNQH-------AIAVSSATAGMHITLMALGI---------- 70 (379)
T ss_pred HHHHHHHHHHHHcCCcc--CCHhHHHHH----HHHHHHhCCCe-------EEEECCHHHHHHHHHHHcCC----------
Confidence 44566677777654432 234444544 55999999864 78899999999988877611
Q ss_pred CCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHH
Q 011057 150 KPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLA 229 (494)
Q Consensus 150 ~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~ 229 (494)
..+++|++++.+|.+...++...|++++.++++.+++.+|+++++++++++|++|+ +++++|...|+++|.++|+
T Consensus 71 --~~Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d~~~i~~~a~ 145 (379)
T PRK11658 71 --GPGDEVITPSLTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAII---PVHYAGAPADLDAIRAIGE 145 (379)
T ss_pred --CCCCEEEECCCcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCCHHHHHHHHH
Confidence 01368999999999999999999999999999876678999999999998898876 4556899999999999999
Q ss_pred HhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccc-cCCCC
Q 011057 230 EKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFH-INYLG 308 (494)
Q Consensus 230 ~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~-~~y~~ 308 (494)
++ |+++++|+||+.+.. .... ..+..++++++++.+|.+.++. .|+++.++++......... ..+..
T Consensus 146 ~~------gi~vi~D~a~a~g~~--~~~~---~~g~~g~~~~Sf~~~K~l~~g~-GG~v~~~~~~~~~~~~~~~~~G~~~ 213 (379)
T PRK11658 146 RY------GIPVIEDAAHAVGTY--YKGR---HIGARGTAIFSFHAIKNITCAE-GGLVVTDDDELADRLRSLKFHGLGV 213 (379)
T ss_pred Hc------CCeEEEECCCccCCe--ECCe---ecCCCCCEEEeCCCCCcCcccC-ceEEEECCHHHHHHHHHHHHcCCCc
Confidence 99 999999999986543 1110 1233356889999999886543 4555555443322111110 00000
Q ss_pred --------CCCCCcc--cccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-----Cc
Q 011057 309 --------ADQPTFT--LNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-----GV 373 (494)
Q Consensus 309 --------~~~~~~~--~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-----~~ 373 (494)
.....+. ..|+. ..+..+.+++.....+++++..++..++++++.+.|++++ +..+..+. ..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~G~n--~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~-~~~~~~~~~~~~~~~ 290 (379)
T PRK11658 214 DAFDRQTQGRAPQAEVLTPGYK--YNLADINAAIALVQLAKLEALNARRREIAARYLQALADLP-FQPLSLPAWPHQHAW 290 (379)
T ss_pred chhhhhcccCCCcceeeccccc--cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CccCcCCCCCCceeE
Confidence 0000000 01111 1223455666666667888999999999999999999887 43322211 12
Q ss_pred cEEEEEecCC-CCCCHHHHHHHHHhcCceeeccccCCCC------------------CCceEEEEEeccCCChHHHHHHH
Q 011057 374 PLVAFSLKDN-KRHDEFEVAELLRRFGWIVPAYTMPADA------------------QHITVLRVVIREDFSRTLAERLV 434 (494)
Q Consensus 374 ~~v~f~~~~~-~~~~~~~l~~~L~~~Gi~v~~~~~~~~~------------------~~~~~lRvs~~~~~t~~~id~~i 434 (494)
.++++++... .+.+.+++.++|.++||.+..+..|... .....+-+-++...+.+++++.+
T Consensus 291 ~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~ 370 (379)
T PRK11658 291 HLFIIRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVI 370 (379)
T ss_pred EEEEEEECCccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHH
Confidence 3556666422 2457889999999999875432212100 01123444456778889999888
Q ss_pred HHHHHHH
Q 011057 435 LDITKVL 441 (494)
Q Consensus 435 ~~l~~~~ 441 (494)
+.|++++
T Consensus 371 ~~i~~~~ 377 (379)
T PRK11658 371 TALQQIA 377 (379)
T ss_pred HHHHHHH
Confidence 8888764
No 143
>PRK08068 transaminase; Reviewed
Probab=99.90 E-value=5e-21 Score=193.57 Aligned_cols=323 Identities=10% Similarity=-0.021 Sum_probs=214.3
Q ss_pred CCCcccccccCCC-hHHHHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHH
Q 011057 56 PRLNLASFVTTWM-EPECDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLA 133 (494)
Q Consensus 56 ~~~~~~~~~~~~~-~p~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a 133 (494)
+.++|+.+.+..+ +|.+.+++.++++.. ...|...++..++++++.+++.+.+|.+.+. ...+++|+|+++++..+
T Consensus 33 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~--~~~i~it~G~~~~l~~~ 110 (389)
T PRK08068 33 DVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDP--ETEVAILFGGKAGLVEL 110 (389)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CccEEEcCCcHHHHHHH
Confidence 3456666554443 466788887777643 2245555678888888888887767864321 01478999999999877
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEeeCC
Q 011057 134 GLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAILGS 212 (494)
Q Consensus 134 ~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~~~ 212 (494)
+.+... .++.|+++.++|..+...++..|++++.+++++ +++.+|++++++++.+++++|++++|+
T Consensus 111 ~~~~~~-------------~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~ 177 (389)
T PRK08068 111 PQCLMN-------------PGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPN 177 (389)
T ss_pred HHHhCC-------------CCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCC
Confidence 666522 136899999999999999999999999999974 347889999999998888999999999
Q ss_pred CCcccccCH---HHHHHHHHHhhcccCCCceEEEecccccccccccCCcc-c-cc-ccCCCceEEEEcCcccC-CcCCce
Q 011057 213 TLNGEFEDV---KLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPEL-E-WD-FRLPLVKSINVSGHKYG-LVYAGI 285 (494)
Q Consensus 213 ~~tG~~~~l---~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~-~~~~~~D~~~~~~hK~l-~~p~g~ 285 (494)
||||.+.+. ++|.++|+++ ++++++|++|+.+.. ..... . .. ........+..++.|.+ .++.++
T Consensus 178 NPTG~~~s~~~~~~l~~la~~~------~~~ii~Deay~~~~~--~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRi 249 (389)
T PRK08068 178 NPTGAVATKAFFEETVAFAKKH------NIGVVHDFAYGAIGF--DGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRV 249 (389)
T ss_pred CCCCCcCCHHHHHHHHHHHHHc------CeEEEEehhhhhhcc--CCCCCcChhhCCCccCCEEEEecchhccCCcccee
Confidence 999999765 5778889999 999999999976431 11000 0 00 01112335556788987 578889
Q ss_pred EEEEEeCCCCccccccc-ccCCCCCCCCCcccccCcchHHHHHHHHHHHHh--cHhHHHHHHHHHHHHHHHHHHHHhhCC
Q 011057 286 GWVIWRNKEDLPEELIF-HINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL--GFEGYRNVMENCHENAMVLKEGLEKTG 362 (494)
Q Consensus 286 G~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l--~~~g~~~~~~~~~~~a~~l~~~L~~~~ 362 (494)
||++.. +..+ ..+.. ...+. .+.+ ...+.++...+ +...+++..+.+.++++++.+.|++++
T Consensus 250 G~~~~~-~~l~-~~l~~~~~~~~----------~~~~---~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g 314 (389)
T PRK08068 250 AFAVGN-ESVI-EAINLLQDHLF----------VSLF---GAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIG 314 (389)
T ss_pred EeEecC-HHHH-HHHHHHHhhcc----------CCCC---hHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999753 3222 22111 11111 1111 11123333333 234456777888888999999999985
Q ss_pred CeEEeecCCCccE-EEEEecCCCCCCHHHHHHHHHh-cCceeeccccCCCCCCceEEEEEec
Q 011057 363 RFNIVSKDEGVPL-VAFSLKDNKRHDEFEVAELLRR-FGWIVPAYTMPADAQHITVLRVVIR 422 (494)
Q Consensus 363 ~~~~~~~~~~~~~-v~f~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRvs~~ 422 (494)
+.+..+ ..++ +.+.+++ ..+..++.+.|.+ .|+.+....... ..+..++|+++.
T Consensus 315 -~~~~~~--~g~~~~~v~~~~--~~~~~~~~~~l~~~~gi~v~pg~~f~-~~~~~~iRi~~~ 370 (389)
T PRK08068 315 -WEVDAP--KGSFFAWMPVPK--GYTSEQFADLLLEKAHVAVAPGNGFG-EHGEGYVRVGLL 370 (389)
T ss_pred -CcccCC--CeeEEEEEECCC--CCCHHHHHHHHHHhCCEEEecchHhC-ccCCCeEEEEEc
Confidence 765433 3444 4566643 3577899999986 699885433221 223468999996
No 144
>PRK07550 hypothetical protein; Provisional
Probab=99.90 E-value=9.7e-21 Score=191.31 Aligned_cols=344 Identities=14% Similarity=0.064 Sum_probs=222.5
Q ss_pred CCCCCcccccccCC-ChHHHHHHHHHHhcc-cCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHH
Q 011057 54 GNPRLNLASFVTTW-MEPECDKLMMAAINK-NYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIM 131 (494)
Q Consensus 54 ~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~ 131 (494)
+.+.+.|+...++. +++.+.+.+.+.+.. ....|...++..++++.+.+++.+..|...+ ...+++|+|+++|+.
T Consensus 28 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~---~~~i~~t~G~~~al~ 104 (386)
T PRK07550 28 DGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAIS---PEQVHITSGCNQAFW 104 (386)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCC---cceEEEecCcHHHHH
Confidence 33445566655443 345677887776643 2234555568999999999999988886542 235889999999998
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEee
Q 011057 132 LAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAIL 210 (494)
Q Consensus 132 ~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~ 210 (494)
+++.++.. .+++|+++.+.|..+...++..|++++.++.++ +++.+|++++++++++++++|++++
T Consensus 105 ~~~~~l~~-------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~ 171 (386)
T PRK07550 105 AAMVTLAG-------------AGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVT 171 (386)
T ss_pred HHHHHhcC-------------CCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeC
Confidence 87777632 136899999999888888899999999999974 4467899999999998899999999
Q ss_pred CCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccc-cCCCceEEEEcCcccCC-cCCce
Q 011057 211 GSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF-RLPLVKSINVSGHKYGL-VYAGI 285 (494)
Q Consensus 211 ~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~hK~l~-~p~g~ 285 (494)
|+||||.+.+ +++|+++|+++ ++++++|++|+.+......+...... ....-.++..+++|.++ ++.++
T Consensus 172 P~NPtG~~~~~~~~~~i~~~~~~~------~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~Ri 245 (386)
T PRK07550 172 PNNPTGVVYPPELLHELYDLARRH------GIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRV 245 (386)
T ss_pred CCCCCCcccCHHHHHHHHHHHHHc------CeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccce
Confidence 9999999865 78899999999 99999999998753210001000000 00112344668889775 67789
Q ss_pred EEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc--HhHHHHHHHHHHHHHHHHHHHHhhCCC
Q 011057 286 GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--FEGYRNVMENCHENAMVLKEGLEKTGR 363 (494)
Q Consensus 286 G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~--~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (494)
|+++..+. .+ ..+.. +.... . .. .+.+.++++...+. .+..++..+++.++++++.+.|.+.++
T Consensus 246 G~i~~~~~-~~-~~~~~---~~~~~----~--~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 311 (386)
T PRK07550 246 GAVVASPA-RI-AEIEK---FMDTV----A--IC---APRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPG 311 (386)
T ss_pred EeeecCHH-HH-HHHHH---HHhhc----c--cC---CCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99987532 22 11111 11000 0 00 11222333333332 233345566777888899999988755
Q ss_pred eEEeecCCCccEEEEEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 364 FNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 364 ~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
+.+. +....++.+.++. .+.+..+++++|. ++|+.+....... ..+..++|+++.. .++++++..++.|.
T Consensus 312 ~~~~--~~g~~~~~~~~~~-~~~~~~~l~~~l~~~~gv~v~pg~~f~-~~~~~~iRis~~~-~~~~~~~~~~~~l~ 382 (386)
T PRK07550 312 WELL--ASGAYFAYVRHPF-PDRPSREVARRLAKEAGILCLPGTMFG-PGQEGYLRLAFAN-ADVAGIGELVERLR 382 (386)
T ss_pred ceeC--CCceEEEEecCCC-CCCCHHHHHHHHHHhcCEEEeCchhhC-CCCCCEEEEEeec-CCHHHHHHHHHHHH
Confidence 6543 2234455555532 2467889999875 6799885433221 1234689999973 34555555444443
No 145
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.90 E-value=5.8e-21 Score=193.11 Aligned_cols=344 Identities=9% Similarity=-0.016 Sum_probs=223.1
Q ss_pred cCCCCCcccccccCC-ChHHHHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCc-ceeeecChhHH
Q 011057 53 DGNPRLNLASFVTTW-MEPECDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETA-VGVGTVGSSEA 129 (494)
Q Consensus 53 ~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~-~~~~t~ggt~a 129 (494)
.+...++|..+.+.. +++.+.+++.+.+... ...|...++..++++.+.+|+.+..|.+.+ .. .+++|+|++++
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~---~~~~I~it~Gs~~a 104 (388)
T PRK07366 28 AGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVD---PETEVLPLIGSQEG 104 (388)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCC---CcCeEEECCCcHHH
Confidence 445556666655443 3567888887776532 334655668888998888888887776542 12 48889999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEE
Q 011057 130 IMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAA 208 (494)
Q Consensus 130 ~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~ 208 (494)
+.+++.++... +++|+++++++..+...++..|++++.+++++ +.+.+|++++++.+.+++++|++
T Consensus 105 l~~~~~~l~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l 171 (388)
T PRK07366 105 TAHLPLAVLNP-------------GDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVL 171 (388)
T ss_pred HHHHHHHhCCC-------------CCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEE
Confidence 99887776331 36899999999999999999999999999974 34678999998888778899999
Q ss_pred eeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCc-cc--ccccCC-CceEEEEcCcccC-C
Q 011057 209 ILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPE-LE--WDFRLP-LVKSINVSGHKYG-L 280 (494)
Q Consensus 209 ~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~--~~~~~~-~~D~~~~~~hK~l-~ 280 (494)
++|+||||.+.+ +++|+++|+++ ++++++|++|+.+.. .... .. ..+... ...++..++.|.+ +
T Consensus 172 ~~p~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~~~~--~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~ 243 (388)
T PRK07366 172 SYPHNPTTAIAPLSFFQEAVAFCQQH------DLVLVHDFPYVDLVF--DGEVEPPSILQADPEKSVSIEFFTLSKSYNM 243 (388)
T ss_pred eCCCCCCCccCCHHHHHHHHHHHHHc------CeEEEEecchhhccc--CCCCCCCChhhCCCCcccEEEEeecccccCC
Confidence 999999999955 55677789999 999999999987642 1110 01 011111 1234556788987 6
Q ss_pred cCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh--cHhHHHHHHHHHHHHHHHHHHHH
Q 011057 281 VYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL--GFEGYRNVMENCHENAMVLKEGL 358 (494)
Q Consensus 281 ~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l--~~~g~~~~~~~~~~~a~~l~~~L 358 (494)
++.++||++... ..+ ..+........ .... ..+ +.+++..+ ..+.+++..+.+.++++++.+.|
T Consensus 244 ~GlRiG~~v~~~-~li-~~l~~~~~~~~---------~~~~-~~~--~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L 309 (388)
T PRK07366 244 GGFRIGFAIGNA-QLI-QALRQVKAVVD---------FNQY-RGI--LNGAIAALTGPQATVQQTVQIFRQRRDAFINAL 309 (388)
T ss_pred cchhheehcCCH-HHH-HHHHHHHhhcc---------cCCC-HHH--HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999998533 222 21111111110 0000 111 12222222 23456677788888889999999
Q ss_pred hhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHH-HhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHH
Q 011057 359 EKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELL-RRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 359 ~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L-~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
++++ +....+. ...++.+.+++.-..+..++++.| .+.|+.+....... ..+..++|+++.. +.++++..++.|
T Consensus 310 ~~~~-~~~~~p~-~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~-~~~~~~iRi~~~~--~~~~l~~~l~rl 384 (388)
T PRK07366 310 HQIG-WPVPLPE-ATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFG-KSGEGYVRFALVH--DPDILEEAVERI 384 (388)
T ss_pred HHCC-CcccCCC-eeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhC-cCCCCeEEEEecC--CHHHHHHHHHHH
Confidence 9885 6544333 455666666432112467788777 56799875432221 1224689999873 455565555444
Q ss_pred HH
Q 011057 438 TK 439 (494)
Q Consensus 438 ~~ 439 (494)
++
T Consensus 385 ~~ 386 (388)
T PRK07366 385 AA 386 (388)
T ss_pred HH
Confidence 43
No 146
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.90 E-value=1.1e-20 Score=172.13 Aligned_cols=334 Identities=15% Similarity=0.110 Sum_probs=234.8
Q ss_pred HHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCC
Q 011057 72 CDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKP 151 (494)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~ 151 (494)
+.+.+.++++.+..++ .+|...++.+++.+-+...|..... .--++..+|+-+...++.....
T Consensus 28 l~~~V~~A~~~~~lgh-~sPe~~qIm~~v~egikyVFkT~n~----~tf~isgsGh~g~E~al~N~le------------ 90 (385)
T KOG2862|consen 28 LSGRVQEAMSRPSLGH-MSPEFVQIMDEVLEGIKYVFKTANA----QTFVISGSGHSGWEAALVNLLE------------ 90 (385)
T ss_pred CCHHHHHhhcCCcccc-CCHHHHHHHHHHHHHHHHHhccCCC----ceEEEecCCcchHHHHHHhhcC------------
Confidence 3344556666665544 6788999999999999999987642 1123333455555444444422
Q ss_pred CCCCeEEeCCCcch--HHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhC-CeEEEEeeCCCCcccccC-HHHHHHH
Q 011057 152 FDKPNIVTGANVQV--CWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDEN-TICVAAILGSTLNGEFED-VKLLNDL 227 (494)
Q Consensus 152 ~~~~~vi~~~~~h~--s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~-t~~vv~~~~~~~tG~~~~-l~~I~~l 227 (494)
.+++|++-...-. .+...++++|++|..|+.+.+ ....++.+.+++..+ +++|.++++.+.||...| ++.+.++
T Consensus 91 -Pgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G-~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~l 168 (385)
T KOG2862|consen 91 -PGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIG-QAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGEL 168 (385)
T ss_pred -CCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcc-cCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHH
Confidence 1245554444332 456678999999999998875 579999999999874 689999999999999999 7888999
Q ss_pred HHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcc--------cc
Q 011057 228 LAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP--------EE 299 (494)
Q Consensus 228 a~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~--------~~ 299 (494)
||+| +.+++||++.+.+..+|.. ...++|+.-..++|.+.+|.|++.+.++++.... ..
T Consensus 169 c~k~------~~lllVD~VaSlggt~F~m-------DewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~ 235 (385)
T KOG2862|consen 169 CHKH------EALLLVDTVASLGGTEFEM-------DEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVS 235 (385)
T ss_pred hhcC------CeEEEEechhhcCCcccee-------hhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceE
Confidence 9999 9999999998877665533 3458999999999999999999997776543210 00
Q ss_pred ccccc----CCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC--Cc
Q 011057 300 LIFHI----NYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE--GV 373 (494)
Q Consensus 300 ~~~~~----~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~--~~ 373 (494)
+.+.. .|.+-......+..|.+...+.++.++|+.+-++|+++.++++.+++++++..|+++| ++.+...+ +.
T Consensus 236 ~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~G-Lq~fv~~e~~rl 314 (385)
T KOG2862|consen 236 FYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALG-LQLFVVDEELRL 314 (385)
T ss_pred EEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccceecChhhcc
Confidence 11111 1121111112234677777789999999999999999999999999999999999997 88665432 44
Q ss_pred cE-EEEEecCCCCCCHHHHHHHHHhcC-ceeeccccCCCCCCceEEEEEecc-CCChHHHHHHHHHHHHHHHH
Q 011057 374 PL-VAFSLKDNKRHDEFEVAELLRRFG-WIVPAYTMPADAQHITVLRVVIRE-DFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 374 ~~-v~f~~~~~~~~~~~~l~~~L~~~G-i~v~~~~~~~~~~~~~~lRvs~~~-~~t~~~id~~i~~l~~~~~~ 443 (494)
+. ..+.. +.++|..+++.++.+++ +.+.....|. ...++||.+.. .-+.+.|+..++.|+..+++
T Consensus 315 ptvttv~v--p~gvDw~dVv~~~~~~~~vei~gglg~~---~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 315 PTVTTVKV--PYGVDWKDVVAYAMSHYVVEIGGGLGPT---VGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred Ccceeeec--CCCCCHHHHHHHHHHhcCEEeccccCCC---cccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 43 33444 44789999999998884 4444444442 35689998754 34556677666666666554
No 147
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=6.8e-21 Score=191.42 Aligned_cols=321 Identities=13% Similarity=0.071 Sum_probs=211.3
Q ss_pred CChHHHHHHHHHHhcccC--CCCCCChhhHHHHHHHHHHHHHHhC--CCCCCCCCcceeeecChhHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNY--VDMDEYPVTTELQNRCVNIIARLFN--APLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~le~~~~~~la~l~g--~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~ 142 (494)
++++.+.+++.++++.+. ..|. .++..++++.+.+++.+..| .+. +...+++|+|+++++..++.+....
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v---~~~~I~it~Ga~~al~~~~~~~~~~-- 114 (374)
T PRK02610 41 DLPPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQI---TPANISVGNGSDELIRSLLIATCLG-- 114 (374)
T ss_pred CCCHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCC---CHHHEEEcCChHHHHHHHHHHHcCC--
Confidence 345678888887766532 2342 35677777776666655432 222 1145889999999998666654221
Q ss_pred HHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh----CCeEEEEeeCCCCcccc
Q 011057 143 NKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE----NTICVAAILGSTLNGEF 218 (494)
Q Consensus 143 ~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~----~t~~vv~~~~~~~tG~~ 218 (494)
.++.|+++.+++..+...++..|++++.++++++++.+|+++|++++.+ ++++|++++|+||||.+
T Consensus 115 ----------g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~ 184 (374)
T PRK02610 115 ----------GEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNP 184 (374)
T ss_pred ----------CCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCC
Confidence 1136999999999999999999999999998765578999999999874 78999999999999999
Q ss_pred cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccc-cCCCceEEEEcCcccC-CcCCceEEEEEeCCCCc
Q 011057 219 EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF-RLPLVKSINVSGHKYG-LVYAGIGWVIWRNKEDL 296 (494)
Q Consensus 219 ~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~hK~l-~~p~g~G~~~~~~~~~~ 296 (494)
.+.+++.++++-. . ++++++|++|..+.. . .... .+ ...++ ++..++.|.+ +++.++||++.. +..+
T Consensus 185 ~s~~~l~~l~~~~-~----~~~iI~De~Y~~~~~--~-~~~~-~~~~~~~~-ivi~SfSK~~g~~GlRiG~~v~~-~~l~ 253 (374)
T PRK02610 185 LTAAELEWLRSLP-E----DILVVIDEAYFEFSQ--T-TLVG-ELAQHPNW-VILRTFSKAFRLAAHRVGYAIGH-PELI 253 (374)
T ss_pred CCHHHHHHHHhcc-C----CcEEEEeccccccCc--c-chHH-HHhcCCCE-EEEEecchhccCcccceeeeecC-HHHH
Confidence 9888887776421 1 799999999987531 1 1001 11 11233 3456788987 788999999853 2222
Q ss_pred ccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccE
Q 011057 297 PEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPL 375 (494)
Q Consensus 297 ~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~ 375 (494)
+.+.... .. + + .+.+.+.++...++. +.+.+..++..+.++.+.+.|++++++.+. ++ ..++
T Consensus 254 -~~l~~~~-~~------~---~----~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~-~g~f 316 (374)
T PRK02610 254 -AVLEKVR-LP------Y---N----LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRVW-PS-AANF 316 (374)
T ss_pred -HHHHHhc-CC------C---C----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeC-CC-cceE
Confidence 2211110 00 0 0 112234444444432 333444455555677788889888767654 32 4566
Q ss_pred EEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 376 VAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 376 v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
+.++++. +.+..++++.|.++|+.+.. ...++|++++ +.++++.+++.|+++++.+
T Consensus 317 ~~~~l~~--~~~~~~~~~~l~~~gi~v~~--------~~~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 317 LYLRLSQ--DAALAALHQALKAQGTLVRH--------TGGGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred EEEeCCC--CCCHHHHHHHHHHCCEEEEe--------CCCeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 6666643 35778999999999998743 1246999987 3567787787777766543
No 148
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.4e-20 Score=190.54 Aligned_cols=347 Identities=15% Similarity=0.088 Sum_probs=219.5
Q ss_pred CcccccccC-CChHHHHHHHHHHhccc---CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHH
Q 011057 58 LNLASFVTT-WMEPECDKLMMAAINKN---YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLA 133 (494)
Q Consensus 58 ~~~~~~~~~-~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a 133 (494)
++|..+.+. ++++.+.+++..+++.. ...|....+...+++.+.+++...++...+ ...+++|+|+++++..+
T Consensus 36 ~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~---~~~i~~t~G~~~al~~~ 112 (394)
T PRK06836 36 FDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLT---ADHIVMTCGAAGALNVA 112 (394)
T ss_pred EEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCC---cCcEEEeCChHHHHHHH
Confidence 445554443 33567888887776542 233444457778887777777766555321 13488999999999877
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCC
Q 011057 134 GLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGST 213 (494)
Q Consensus 134 ~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~ 213 (494)
+.++.. .+++|++++++|..+..+++..|++++.++++++++.+|+++|++++++++++|++++++|
T Consensus 113 ~~~l~~-------------~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~N 179 (394)
T PRK06836 113 LKAILN-------------PGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNN 179 (394)
T ss_pred HHHhcC-------------CCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCC
Confidence 776632 1258999999999999999999999999999875578999999999998999999999999
Q ss_pred CcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCC-cCCceEEEE
Q 011057 214 LNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYAGIGWVI 289 (494)
Q Consensus 214 ~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~G~~~ 289 (494)
|||.+.| +++|+++|++..++++.++++++|++|..+.. .............-..+..++.|.+. ++.++|+++
T Consensus 180 PtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~ 257 (394)
T PRK06836 180 PTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVY--DGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIA 257 (394)
T ss_pred CCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccc--CCCCCCChHHccCcEEEEecchhhccCcceeeEEEe
Confidence 9999976 56677778882111111999999999987532 11011101111123566678899775 677899988
Q ss_pred EeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeec
Q 011057 290 WRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSK 369 (494)
Q Consensus 290 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (494)
..+.......+........... +.- ..+.+.+.+....+.. +. ..+.+.++++.+.+.|++++ +++..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~q~~~~~~l~~-~~--~~~~~~~~r~~l~~~L~~~g-~~~~~~ 326 (394)
T PRK06836 258 VNPEMEDADDLVAALVFANRIL------GFV-NAPALMQRVVAKCLDA-TV--DVSIYKRNRDLLYDGLTELG-FECVKP 326 (394)
T ss_pred cCHHHhhhHHHHHHHHHHhhcc------ccc-cCCHHHHHHHHHHhCC-hH--HHHHHHHHHHHHHHHHHhCC-CEeecC
Confidence 7543110000000000000000 000 0112233333344432 21 23456667788889998885 776544
Q ss_pred CCCccEEEE-EecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 370 DEGVPLVAF-SLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 370 ~~~~~~v~f-~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
. .+++.| .++. .+..++++.|.++|+.+....... ...++|++++ .++++++..++.|++++++
T Consensus 327 ~--gg~~~~~~~~~---~~~~~~~~~l~~~gv~v~~g~~f~---~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 327 Q--GAFYLFPKSPE---EDDVAFCEKAKKHNLLLVPGSGFG---CPGYFRLSYC--VDTETIERSLPAFEKLAKE 391 (394)
T ss_pred C--ceEEEEEeCCC---CCHHHHHHHHHhCCEEEECchhcC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 3 344444 4422 367788999999999875433221 1357999997 3677777777777776654
No 149
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.90 E-value=9e-21 Score=191.29 Aligned_cols=333 Identities=13% Similarity=0.044 Sum_probs=214.7
Q ss_pred CcccccccCC-ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHH
Q 011057 58 LNLASFVTTW-MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLA 136 (494)
Q Consensus 58 ~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a 136 (494)
++|+.+.+.. +.+.+.+.+..........|....+...+++.+.+++.+..|...+ ...+++|+|+++++.+++.+
T Consensus 32 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~---~~~i~it~G~~~al~~~~~~ 108 (384)
T PRK06348 32 IDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFK---RNEIMATVGACHGMYLALQS 108 (384)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC---hhhEEEcCChHHHHHHHHHH
Confidence 4445444443 2355555444444333445655567778888888888877776542 24589999999999988887
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEecc-CCccccCHHHHHHhhhhCCeEEEEeeCCCCc
Q 011057 137 FKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS-EGYYVMDPVKAVEMVDENTICVAAILGSTLN 215 (494)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~t 215 (494)
+... +++|+++.++|..+...++..|.+++.++++ ++++.+|+++|++++.+++++|++++++|||
T Consensus 109 ~~~~-------------gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPt 175 (384)
T PRK06348 109 ILDP-------------GDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPT 175 (384)
T ss_pred hcCC-------------CCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCC
Confidence 7331 2589999999999999999999999999874 3446799999999998888999999999999
Q ss_pred ccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc-ccc-cCCCceEEEEcCcccCC-cCCceEEEE
Q 011057 216 GEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE-WDF-RLPLVKSINVSGHKYGL-VYAGIGWVI 289 (494)
Q Consensus 216 G~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-~~~~~D~~~~~~hK~l~-~p~g~G~~~ 289 (494)
|.+.+ +++|.++|+++ ++++++|++|+.+.. ...... ..+ +...-.++..++.|.++ ++.++||++
T Consensus 176 G~~~s~~~~~~l~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v 247 (384)
T PRK06348 176 GAVFSKETLEEIAKIAIEY------DLFIISDEVYDGFSF--YEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVI 247 (384)
T ss_pred CcCCCHHHHHHHHHHHHHC------CeEEEEeccccccee--CCCccchhhcCCCcCcEEEEecchhccCCccccceeee
Confidence 99965 77888889999 999999999987642 111000 011 11123355567889875 788999998
Q ss_pred EeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc--HhHHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Q 011057 290 WRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--FEGYRNVMENCHENAMVLKEGLEKTGRFNIV 367 (494)
Q Consensus 290 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 367 (494)
..+. .+ ..+........ .+ .+.+.+.++...+. ..-.++..+...++++++.+.|++++++++.
T Consensus 248 ~~~~-~~-~~~~~~~~~~~---------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~ 313 (384)
T PRK06348 248 APDY-II-ETAKIINEGIC---------FS---APTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLH 313 (384)
T ss_pred cCHH-HH-HHHHHHHHhcc---------CC---CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 7432 21 11111111000 01 11223333333332 2234556666777888999999888666654
Q ss_pred ecCCCccEEE-EEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHH
Q 011057 368 SKDEGVPLVA-FSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLV 434 (494)
Q Consensus 368 ~~~~~~~~v~-f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i 434 (494)
.+ ..+++. +.++. .+.+..++++.|. +.|+.+....... ..+..++|+++. .+.++++..+
T Consensus 314 ~p--~gg~~~~~~~~~-~~~~~~~l~~~l~~~~gv~v~pg~~f~-~~~~~~iRi~~~--~~~~~l~~al 376 (384)
T PRK06348 314 PP--KGSIYAFINIKK-TGLSSVEFCEKLLKEAHVLVIPGKAFG-ESGEGYIRLACT--VGIEVLEEAF 376 (384)
T ss_pred cC--CeeEEEEEeccc-CCCCHHHHHHHHHHhCCEEEcCchhhc-cCCCCeEEEEec--CCHHHHHHHH
Confidence 33 345544 45531 2457788998876 5799875332221 123568999985 3444444333
No 150
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.90 E-value=9.2e-21 Score=191.91 Aligned_cols=344 Identities=14% Similarity=0.023 Sum_probs=221.0
Q ss_pred cCCCCCcccccccCC-ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHH
Q 011057 53 DGNPRLNLASFVTTW-MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIM 131 (494)
Q Consensus 53 ~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~ 131 (494)
.+.+.++|..+.++. +++.+.+++.+.+. ....|....+..++++.+.+++.+.+|.+........+++|+|+++++.
T Consensus 26 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~ 104 (393)
T TIGR03538 26 ASKPPIALSIGEPKHPTPAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALF 104 (393)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHH
Confidence 345556666665553 45668888877664 3344655567888998988888887776521001124788999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEee
Q 011057 132 LAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAIL 210 (494)
Q Consensus 132 ~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~ 210 (494)
+++.++... | ....|+++.+.+..+...++..|++++.+++++ +++.+|++++++++.+++++|++++
T Consensus 105 ~~~~~l~~~--------g---d~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~ 173 (393)
T TIGR03538 105 AFAQAVINP--------G---QAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCS 173 (393)
T ss_pred HHHHHHcCC--------C---CcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeC
Confidence 888776431 1 012489999999999999999999999999964 3468899999999888899999999
Q ss_pred CCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc---c--ccc---CCCceEEEEcCcc-c
Q 011057 211 GSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE---W--DFR---LPLVKSINVSGHK-Y 278 (494)
Q Consensus 211 ~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~---~--~~~---~~~~D~~~~~~hK-~ 278 (494)
|+||||.+.+ +++|+++|+++ ++++++|++|..+...-..+... . +.. .++ -++..++.| |
T Consensus 174 p~NPtG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vi~i~S~SK~~ 246 (393)
T TIGR03538 174 PGNPTGAVLSLDTLKKLIELADQY------GFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRR-CLVFHSLSKRS 246 (393)
T ss_pred CCCCcCcccCHHHHHHHHHHHHHC------CEEEEECcchhhcccCCCCCCcCHHHhccccccccccc-EEEEecchhhc
Confidence 9999999966 78888899999 99999999998653210000000 0 010 112 255668889 6
Q ss_pred CCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc-HhHHHHHHHHHHHHHHHHHHH
Q 011057 279 GLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-FEGYRNVMENCHENAMVLKEG 357 (494)
Q Consensus 279 l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~-~~g~~~~~~~~~~~a~~l~~~ 357 (494)
++++.++|+++... ..+ ..+.....+.. .+ .+.+.+.+++..+. .+.+++..+.+.+.++.+.+.
T Consensus 247 ~~~GlRvG~~i~~~-~l~-~~~~~~~~~~~---------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
T TIGR03538 247 NLPGLRSGFVAGDA-EIL-KAFLRYRTYHG---------CA---MPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEI 312 (393)
T ss_pred CCcccceEEEecCH-HHH-HHHHHHHHhhc---------cC---cCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 88999999987643 222 11111111110 00 12233444444443 334566677777888888888
Q ss_pred HhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHH-hcCceeeccccCC-----CCCCceEEEEEeccCCChHHHH
Q 011057 358 LEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPA-----DAQHITVLRVVIREDFSRTLAE 431 (494)
Q Consensus 358 L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~-----~~~~~~~lRvs~~~~~t~~~id 431 (494)
|++. +.+..+ ....++.+.++ .+..+++++|. +.|+.+....... ...+..++|+++.. +.++++
T Consensus 313 L~~~--~~~~~p-~gg~f~~~~~~----~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~--~~~~l~ 383 (393)
T TIGR03538 313 LGQV--LDLELP-DAGFYLWPKVP----GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA--PLEECV 383 (393)
T ss_pred HHhh--CcccCC-CeeEEEEEECC----CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC--CHHHHH
Confidence 8775 333333 24455666653 24678888875 5799874433211 12235689999874 455555
Q ss_pred HHHHHHH
Q 011057 432 RLVLDIT 438 (494)
Q Consensus 432 ~~i~~l~ 438 (494)
..++.|+
T Consensus 384 ~~l~~l~ 390 (393)
T TIGR03538 384 EAAERIR 390 (393)
T ss_pred HHHHHHH
Confidence 4444443
No 151
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.90 E-value=5.6e-21 Score=206.75 Aligned_cols=351 Identities=13% Similarity=0.067 Sum_probs=235.9
Q ss_pred CCC--CCCCCHHHHHHHHHHhhhhcCCCCCcccc-cc-cCCChHHHHHHHHHHhc--c--cCCCCCCChhhHHHHHHHHH
Q 011057 31 TMP--ENSIPKEAAYQIINDELMLDGNPRLNLAS-FV-TTWMEPECDKLMMAAIN--K--NYVDMDEYPVTTELQNRCVN 102 (494)
Q Consensus 31 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~p~~~~~~~~~~~--~--~~~~~~~~~~~~~le~~~~~ 102 (494)
.+| ..++++.+++++++++...+.. +.+|.+ +. ++..++.+.+.+.+... + .+...+.+++..+...+.+.
T Consensus 77 ~lp~~~~~~sE~e~~~~~~~la~kN~~-~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt 155 (993)
T PLN02414 77 KLSKYDEGLTESQMLEHMKSLASKNKV-FKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQT 155 (993)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCc-cccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHH
Confidence 455 2578999999999988755432 333333 22 33345556566654332 1 22333445788888888999
Q ss_pred HHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH----HHHHcCCee
Q 011057 103 IIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK----FARYFEVEL 178 (494)
Q Consensus 103 ~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~----~~~~~G~~v 178 (494)
++++|+|++. ..+.++.++|.+...++.+.+.. .| .+++|++++..|++... .++..|+++
T Consensus 156 ~ia~LtG~~~-----anaSL~d~aTAaaea~~~a~~~~-------~g---~~~~VlVs~~~hP~~~~v~~t~a~~~GieV 220 (993)
T PLN02414 156 MITDLTGLPM-----SNASLLDEGTAAAEAMAMCNNIL-------KG---KKKKFLIASNCHPQTIDVCQTRADGLGLEV 220 (993)
T ss_pred HHHHHhCCCh-----hhEeecCChHHHHHHHHHHHhcc-------cC---CCCEEEEcCccCHhHHHHHHHhhhhcCCEE
Confidence 9999999987 34778888888877555444221 11 13579999999987654 445579999
Q ss_pred EEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCc
Q 011057 179 KEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPE 258 (494)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~ 258 (494)
+.++++.. + ...+....++ ++-.+.+|.+.|+++|+++||++ |++++| +|+..+..++. +
T Consensus 221 ~~v~~~~~----~------~~~~~v~~vl-vq~P~~~G~v~dv~~I~~~ah~~------GaL~iV-aad~lal~~l~-~- 280 (993)
T PLN02414 221 VVADEKDF----D------YSSGDVCGVL-VQYPATDGEVLDYAEFVKNAHAN------GVKVVM-ATDLLALTMLK-P- 280 (993)
T ss_pred EEecchhh----c------cccCceEEEE-EecCCCCeEEcCHHHHHHHHHHc------CCEEEE-EECHHHhcCCC-C-
Confidence 99987431 1 1122333443 44555779999999999999999 999999 87766544321 1
Q ss_pred ccccccCCCceEEEEcCcccCCcCCc-----eEEEEEeCCCCcccccc-cccCCCCCCC--C-------------Ccccc
Q 011057 259 LEWDFRLPLVKSINVSGHKYGLVYAG-----IGWVIWRNKEDLPEELI-FHINYLGADQ--P-------------TFTLN 317 (494)
Q Consensus 259 ~~~~~~~~~~D~~~~~~hK~l~~p~g-----~G~~~~~~~~~~~~~~~-~~~~y~~~~~--~-------------~~~~~ 317 (494)
.+..++|+++.++|||+ +|.| .|+++++++. . +.++ ....|-.... . .+. .
T Consensus 281 ----pge~GADi~vgsgqKwg-~P~G~GGP~aGflavr~~~-~-r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrE-k 352 (993)
T PLN02414 281 ----PGEWGADIVVGSAQRFG-VPMGYGGPHAAFLATSQEY-K-RLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRD-K 352 (993)
T ss_pred ----HhhccCcEEEECCCccc-cCCCCCCCCeeEEEECHHH-H-hhCCCcccCcccCCCCCcccccccccccchhhhc-c
Confidence 12348999999999998 3433 8999998752 1 2222 1112210000 0 011 2
Q ss_pred cCcchHHHHHHHHHH-----HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHH
Q 011057 318 FSKGSSQVIAQYYQL-----IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVA 392 (494)
Q Consensus 318 ~s~~~~~~~a~~~al-----~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~ 392 (494)
+|.+.....++.+++ .++|..|++++.+++++++.+++++|.+.| +++..++ .+.+++|++. +..++.
T Consensus 353 aTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G-~~~~~~~-~f~~vt~~~~-----~~~~v~ 425 (993)
T PLN02414 353 ATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLG-FQVQSLP-FFDTVKVKCS-----DADAIA 425 (993)
T ss_pred cccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcC-CccCCCC-CcCeEEEecC-----CHHHHH
Confidence 444443444444444 456889999999999999999999998876 8887664 6778888873 347899
Q ss_pred HHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHH
Q 011057 393 ELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITK 439 (494)
Q Consensus 393 ~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~ 439 (494)
++|.++||.++... ...+|+|+++.+|++|||+|++.|..
T Consensus 426 ~~L~~~gI~l~~~~-------~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 426 DAAAKVGINLRVVD-------ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred HHHHHCCCeeEEec-------CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 99999999865421 23599999999999999999998863
No 152
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=1.3e-20 Score=183.15 Aligned_cols=330 Identities=14% Similarity=0.097 Sum_probs=229.8
Q ss_pred HHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcC
Q 011057 70 PECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEG 149 (494)
Q Consensus 70 p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g 149 (494)
....+++.+.+..++... .+...++|+ ++++++|... ++.+++||.|+.++++++.- |
T Consensus 15 ~~e~~~v~~vl~sg~i~~--G~~v~~FE~----~~ae~~G~k~-------ava~~sgT~AL~laL~al~i---------g 72 (374)
T COG0399 15 EEELAAVQEVLKSGWLTG--GPFVRRFEQ----AFAEYLGVKY-------AVAVSSGTAALHLALLALAI---------G 72 (374)
T ss_pred hHHHHHHHHHHHcCCeec--ChHHHHHHH----HHHHHhCCCe-------EEEecChHHHHHHHHHhcCC---------C
Confidence 456788888888776644 556666665 4999999976 88999999999999987621 1
Q ss_pred CCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHH
Q 011057 150 KPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLA 229 (494)
Q Consensus 150 ~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~ 229 (494)
.+++||+|+.++.+...+.-+.|+++++|++|++++.+|++.|+++|+++|++|+.++ ..|...++++|.++|+
T Consensus 73 ---~GDeVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVh---l~G~~~dm~~i~~la~ 146 (374)
T COG0399 73 ---PGDEVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVH---LAGQPCDMDAIMALAK 146 (374)
T ss_pred ---CCCEEEecCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCeEEEEeh---hccCCCCHHHHHHHHH
Confidence 2369999999999999999999999999999988899999999999999999986544 4588889999999999
Q ss_pred HhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCC
Q 011057 230 EKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGA 309 (494)
Q Consensus 230 ~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~ 309 (494)
+| |++|+.|+||+.|.. ........ ...+-+++|.+.|.+.++ ..|++++++++......... ..-..
T Consensus 147 ~~------~l~vIEDaAqa~Ga~--y~gk~vGt--~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr-~hG~~ 214 (374)
T COG0399 147 RH------GLPVIEDAAQAHGAT--YKGKKVGS--FGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLR-NHGLS 214 (374)
T ss_pred Hc------CCeEEEEcchhccCe--ecCccccc--ccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHH-HhCcC
Confidence 99 999999999998753 22211111 234778889999998766 55777777654332211111 10000
Q ss_pred C----CCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCC----ccEEEEEec
Q 011057 310 D----QPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEG----VPLVAFSLK 381 (494)
Q Consensus 310 ~----~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~----~~~v~f~~~ 381 (494)
. ......-|.. ...-.+.+++....-+.++++.++..++++++.+.|++++++.+...+.. ..++.+.+.
T Consensus 215 ~~~~~~y~~~~~G~N--~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~ 292 (374)
T COG0399 215 RDAVFKYLHEELGYN--YRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVD 292 (374)
T ss_pred CCccccceeeecccc--cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEec
Confidence 0 0000111211 12223344444444556678888889999999999999876554443321 234444554
Q ss_pred CCCCCCHHHHHHHHHhcCceeeccccCC---------------CC-----CCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 382 DNKRHDEFEVAELLRRFGWIVPAYTMPA---------------DA-----QHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 382 ~~~~~~~~~l~~~L~~~Gi~v~~~~~~~---------------~~-----~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
.. +.+.+.+.+.|.++|+....+..|- .. .....+.+=+.+..+.+++++.++.|++++
T Consensus 293 ~~-~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~ 371 (374)
T COG0399 293 EE-GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVL 371 (374)
T ss_pred CC-CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 32 4677899999999977632222220 00 113456777788999999999999888876
Q ss_pred H
Q 011057 442 H 442 (494)
Q Consensus 442 ~ 442 (494)
.
T Consensus 372 ~ 372 (374)
T COG0399 372 G 372 (374)
T ss_pred c
Confidence 5
No 153
>PRK09105 putative aminotransferase; Provisional
Probab=99.90 E-value=4.6e-21 Score=191.96 Aligned_cols=310 Identities=17% Similarity=0.069 Sum_probs=212.1
Q ss_pred CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
+++|.+.+++.+++... ..|. .+. ..++++.+++++|+++ ..+++|+|+++++.+++.++...
T Consensus 56 ~~~~~~~~a~~~~~~~~-~~Y~-~~~----~~~Lr~aia~~~~v~~-----e~I~it~Gs~~ai~~~~~~l~~~------ 118 (370)
T PRK09105 56 GPSPAARDAAARSAALS-GRYD-LEL----EDDLRTLFAAQEGLPA-----DHVMAYAGSSEPLNYAVLAFTSP------ 118 (370)
T ss_pred CCCHHHHHHHHHHHHHh-cCCC-Cch----HHHHHHHHHHHhCcCh-----hhEEEcCChHHHHHHHHHHHcCC------
Confidence 34677878877765431 2222 122 3346677899999876 35899999999999888776331
Q ss_pred hcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHH
Q 011057 147 AEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLND 226 (494)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~ 226 (494)
+++|++++++|..+...++..|++++.++++++ +.+|++++++. .+++++|++++|+||||.+.+.++|.+
T Consensus 119 -------gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~ 189 (370)
T PRK09105 119 -------TAGLVTADPTYEAGWRAADAQGAPVAKVPLRAD-GAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEW 189 (370)
T ss_pred -------CCEEEEeCCChHHHHHHHHHcCCeEEEecCCCC-CCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHH
Confidence 268999999999999999999999999998764 78999999887 466889999999999999999999999
Q ss_pred HHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEE-EcCcccC-CcCCceEEEEEeCCCCccccccccc
Q 011057 227 LLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSIN-VSGHKYG-LVYAGIGWVIWRNKEDLPEELIFHI 304 (494)
Q Consensus 227 la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~hK~l-~~p~g~G~~~~~~~~~~~~~~~~~~ 304 (494)
+++.+++ ++++++|++|..+.. .+. ..++.....++++ .++.|.+ +++.++||++.... .+ +.+...
T Consensus 190 l~~~~~~----~~~lIvDEaY~~f~~---~~s-~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~-~i-~~l~~~- 258 (370)
T PRK09105 190 LLANKPA----GSVLLVDEAYIHFSD---APS-VVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPD-LL-AKLARF- 258 (370)
T ss_pred HHHhCCC----CcEEEEECchHHhcc---Ccc-hHHHHhhCCCEEEEecccHhhcCCccceeeeecCHH-HH-HHHHhc-
Confidence 8865311 799999999965421 110 0111111234444 4667876 57778999986432 22 111110
Q ss_pred CCCCCCCCCcccccCcchHHHHHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCC
Q 011057 305 NYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDN 383 (494)
Q Consensus 305 ~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (494)
.+ .. .....+.+++..+.. +.+++..++..++++++.+.|++.+ +++..+ ..+++.+.+.
T Consensus 259 ~~-----------~~---~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~--~~~f~~~~~~-- 319 (370)
T PRK09105 259 GH-----------NP---LPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKKG-YKCTPS--QANCFMVDVK-- 319 (370)
T ss_pred CC-----------CC---cCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CCcCCC--CCcEEEEeCC--
Confidence 00 11 222334445544433 3445666778888899999999985 776543 4566665552
Q ss_pred CCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 384 KRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 384 ~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
.+..++.+.|.++||.+... ++ ....++|++++ +++++++|+++|++++
T Consensus 320 --~~~~~l~~~L~~~gI~v~~~-~~---~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 320 --RPAKAVADAMAKQGVFIGRS-WP---IWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred --CCHHHHHHHHHHCCcEEecC-CC---CCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 26678999999999987321 11 12457999987 6788999999988765
No 154
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.90 E-value=9.4e-21 Score=190.90 Aligned_cols=330 Identities=14% Similarity=0.059 Sum_probs=212.1
Q ss_pred HHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcC
Q 011057 70 PECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEG 149 (494)
Q Consensus 70 p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g 149 (494)
+...+++.+++..+.. ...+...+ +++.+++++|.+. .+++++|++|+.+++.++.-.
T Consensus 10 ~~~~~~v~~~~~~~~~--~~g~~~~~----le~~la~~~g~~~-------~v~~~sgt~al~~~l~al~~~--------- 67 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFL--TQGPTVPA----FEEALAEYVGAKY-------AVAFNSATSALHIACLALGVG--------- 67 (380)
T ss_pred HHHHHHHHHHHhcCCc--cCChhHHH----HHHHHHHHHCCCe-------EEEEcCHHHHHHHHHHHcCCC---------
Confidence 4456666677765433 22344444 5556899999864 567778999998888766110
Q ss_pred CCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhh----hCCeEEEEeeCCCCcccccCHHHHH
Q 011057 150 KPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVD----ENTICVAAILGSTLNGEFEDVKLLN 225 (494)
Q Consensus 150 ~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~t~~vv~~~~~~~tG~~~~l~~I~ 225 (494)
.+++|++++++|.++..++...|++++.++++++++.+|+++++++++ ++|++|++++ ++|...|+++|.
T Consensus 68 ---~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~~~~i~ 141 (380)
T TIGR03588 68 ---PGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVDMQAIA 141 (380)
T ss_pred ---CCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC---CCCccCCHHHHH
Confidence 136899999999999999999999999999976567899999999998 6788877544 579999999999
Q ss_pred HHHHHhhcccCCCceEEEecccccccccccCCcccccccC-CCceEEEEcCc--ccCCcCCceEEEEEeCCCCccccccc
Q 011057 226 DLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL-PLVKSINVSGH--KYGLVYAGIGWVIWRNKEDLPEELIF 302 (494)
Q Consensus 226 ~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~h--K~l~~p~g~G~~~~~~~~~~~~~~~~ 302 (494)
++|+++ ++++++|++|+.+.. + .. . .++. ...|+.++|+| |++..+. .|++++.++.........
T Consensus 142 ~l~~~~------~~~lI~D~a~a~g~~-~-~~-~--~~g~~~~~d~~~~S~~~~K~~~~~~-GG~v~~~~~~~~~~~~~~ 209 (380)
T TIGR03588 142 ALAKKH------GLKIIEDASHALGAE-Y-GG-K--PVGNCRYADATVFSFHPVKIITTAE-GGAVTTNDEELAERMRLL 209 (380)
T ss_pred HHHHHc------CCEEEEECCCcccCc-c-CC-E--eCCCccccceEEEecCCCCcccccC-ceEEEECCHHHHHHHHHH
Confidence 999999 999999999987642 1 11 0 1111 13489998988 8986653 455666554332111000
Q ss_pred cc-CCCCCC---------CCCcc--cccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC
Q 011057 303 HI-NYLGAD---------QPTFT--LNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKD 370 (494)
Q Consensus 303 ~~-~y~~~~---------~~~~~--~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 370 (494)
.. .+.... ...+. ..|......-+ .+++....-+.+.++.++..++++++.+.|..++++++..++
T Consensus 210 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l--~aa~g~~qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~ 287 (380)
T TIGR03588 210 RSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDI--QAALGLSQLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIP 287 (380)
T ss_pred HHCCCCCCcccccccccCcceeeeeccccccCccHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCC
Confidence 00 000000 00000 00111001111 122211112346778888899999999999999876654332
Q ss_pred C----CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCC---------CC---------CceEEEEEeccCCChH
Q 011057 371 E----GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPAD---------AQ---------HITVLRVVIREDFSRT 428 (494)
Q Consensus 371 ~----~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~---------~~---------~~~~lRvs~~~~~t~~ 428 (494)
. ...++.+.+....+.+.+++.+.|.++||.++.+..|.. .. ....+++.++...|.+
T Consensus 288 ~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~ 367 (380)
T TIGR03588 288 LGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLE 367 (380)
T ss_pred CCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHH
Confidence 1 112334444322345788999999999998754322210 00 1256888888899999
Q ss_pred HHHHHHHHHHHHH
Q 011057 429 LAERLVLDITKVL 441 (494)
Q Consensus 429 ~id~~i~~l~~~~ 441 (494)
|+++.++.|++++
T Consensus 368 dv~~i~~~l~~~~ 380 (380)
T TIGR03588 368 QQQRVVETLRKVL 380 (380)
T ss_pred HHHHHHHHHHHhC
Confidence 9999888888753
No 155
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.89 E-value=3.7e-21 Score=197.06 Aligned_cols=322 Identities=15% Similarity=0.057 Sum_probs=212.2
Q ss_pred HHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcC
Q 011057 70 PECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEG 149 (494)
Q Consensus 70 p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g 149 (494)
|.+.+++.+.... ...|....+..++.+.+.+|+....+.+ ..+++|+|+++++.+++.++...
T Consensus 101 p~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~------~~Iiit~G~~~al~~~~~~l~~p--------- 164 (431)
T PRK15481 101 PDLSRYFARLSRT-PRLYGDAPVSPELHAWAARWLRDDCPVA------FEIDLTSGAIDAIERLLCAHLLP--------- 164 (431)
T ss_pred HHHHHHHHHhhhh-hhhcCCcCCCHHHHHHHHHHHhhccCCc------CeEEEecCcHHHHHHHHHHhCCC---------
Confidence 4555655554322 2234444455666666555554422211 25899999999999888877431
Q ss_pred CCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEe-eCCCCcccccCHH---HHH
Q 011057 150 KPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAI-LGSTLNGEFEDVK---LLN 225 (494)
Q Consensus 150 ~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~-~~~~~tG~~~~l~---~I~ 225 (494)
++.|+++.++|..+...++..|++++.++++++ .+|+++|++++++++++++++ +++||||.+.+.+ +|.
T Consensus 165 ----gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~--g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~ 238 (431)
T PRK15481 165 ----GDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE--GMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALR 238 (431)
T ss_pred ----CCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC--CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHH
Confidence 368999999999999999999999999999764 489999999998888888887 9999999998875 899
Q ss_pred HHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccC
Q 011057 226 DLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHIN 305 (494)
Q Consensus 226 ~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~ 305 (494)
++|++++ ++|+++|++|+.+...-..+.... ..+. .++..++.|.++++.++||++... ... ..+.....
T Consensus 239 ~la~~~~-----~~~ii~De~Y~~~~~~~~~~~~~~--~~~~-vi~~~SfSK~~~~GlRiG~~i~~~-~~~-~~~~~~~~ 308 (431)
T PRK15481 239 NLLARYP-----QVLVIIDDHFALLSSSPYHSVIPQ--TTQR-WALIRSVSKALGPDLRLAFVASDS-ATS-ARLRLRLN 308 (431)
T ss_pred HHHHhcC-----CceEEecCchhhhccCCCCCCCcC--CCCC-EEEEeeeccccCCCceeEEEeCCH-HHH-HHHHHHHh
Confidence 9998874 799999999987642100111111 1122 345567889887888899887533 222 21111101
Q ss_pred CCCCCCCCcccccCcchHHHHHHHHHHHHhcHhH----HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEec
Q 011057 306 YLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEG----YRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLK 381 (494)
Q Consensus 306 y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g----~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~ 381 (494)
+.. . ..+.+.+.++..++.... +++..+.+.++++++.+.|++.+ +++..+. ...++.+.++
T Consensus 309 ~~~---------~---~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~-~~~~~p~-gg~f~~~~l~ 374 (431)
T PRK15481 309 SGT---------Q---WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYG-IAIPSPG-DGLNLWLPLD 374 (431)
T ss_pred ccc---------c---CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccccCC-CeEEEEEECC
Confidence 100 0 122344555555553322 45567777888889999999874 6653433 4556666663
Q ss_pred CCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 382 DNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 382 ~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
. +..++.+.|.++|+.+.............++|++++. .+.++++.+++.|.+++.
T Consensus 375 ~----~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 375 T----DSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST-LNDAEINRLAADLHQALN 430 (431)
T ss_pred C----CHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence 2 4678999999999988553322111223579999974 457788888877777654
No 156
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=7.3e-21 Score=191.05 Aligned_cols=328 Identities=19% Similarity=0.097 Sum_probs=217.6
Q ss_pred CcccccccC-CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHH
Q 011057 58 LNLASFVTT-WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLA 136 (494)
Q Consensus 58 ~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a 136 (494)
++|..+.++ .+++.+.+++.+.... ...|....+ . ++++++++++|+++ ..+++|+|+++++.+.+.+
T Consensus 39 i~l~~~~~~~~~~~~~~~al~~~~~~-~~~Y~~~~g-~----~lr~~ia~~~~~~~-----~~i~~t~G~~~~l~~~~~~ 107 (371)
T PRK05166 39 AKLGSNENPLGPSPAVRRAFADIAEL-LRLYPDPQG-R----ALREAIAARTGVPA-----DRIILGNGSEDLIAVICRA 107 (371)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHH-hhcCCCCcH-H----HHHHHHHHHhCcCH-----HHEEEcCCHHHHHHHHHHH
Confidence 344444333 3456677777654432 223332222 2 46677888999865 3589999999998877766
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcc
Q 011057 137 FKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNG 216 (494)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG 216 (494)
+.+ .+++|+++.++|..+...++..|++++.++++++ +.+|++++++++++++++|++++++||||
T Consensus 108 ~~~-------------~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~~~~~~~~v~l~~p~NPtG 173 (371)
T PRK05166 108 VLR-------------PGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPD-LGFDLDALCAAVARAPRMLMFSNPSNPVG 173 (371)
T ss_pred hcC-------------CCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCC-CCCCHHHHHHhhhcCCCEEEEeCCCCCCC
Confidence 522 1257999999999999999999999999999764 68999999999988899999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc-CCCceEEEEcCcccCC-cCCceEEEEEeCCC
Q 011057 217 EFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGL-VYAGIGWVIWRNKE 294 (494)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~hK~l~-~p~g~G~~~~~~~~ 294 (494)
.+.+.+++.++++...+ ++++++|++|+.+...-..+.....+. ...-.++..++.|.++ ++.++||+++.++.
T Consensus 174 ~~~~~~~~~~l~~~~~~----~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~ 249 (371)
T PRK05166 174 SWLTADQLARVLDATPP----ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPE 249 (371)
T ss_pred CCCCHHHHHHHHHhCCC----CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHH
Confidence 99999998888876421 789999999987642100000000011 1111345567888774 88899998875543
Q ss_pred CcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc-HhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCc
Q 011057 295 DLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-FEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGV 373 (494)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 373 (494)
.. ..+.....+. + .+.+.+.+++..+. .+.+++..+...+.++++.+.|++.+ +.+. ++ ..
T Consensus 250 l~-~~~~~~~~~~----------~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~-p~-~g 311 (371)
T PRK05166 250 LV-GLLDRVRTPF----------N----VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMG-YRIA-PS-RA 311 (371)
T ss_pred HH-HHHHHhccCC----------C----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCc-CeeC-CC-cC
Confidence 32 2111110000 1 12233434444432 34456667777888889999999885 7653 33 45
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 374 PLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 374 ~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
+++.+.+. .+..++.+.|.++|+.+.....+ ....++|++++ +.++.++|++.|+.+++
T Consensus 312 ~fl~~~~~----~~~~~l~~~l~~~gi~v~p~~~~---~~~~~iRi~~~---~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 312 NFLFFDAR----RPASAVAEALLRQGVIVKPWKQP---GFETFIRVSIG---SPEENDHFVAALDKVLE 370 (371)
T ss_pred CEEEEeCC----CCHHHHHHHHHHCCeEEecCCCC---CCCCeEEEEcC---CHHHHHHHHHHHHHHhh
Confidence 56655542 25678999999999987654322 23568999998 56778888888877643
No 157
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.2e-21 Score=184.45 Aligned_cols=326 Identities=19% Similarity=0.140 Sum_probs=210.6
Q ss_pred cccccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 011057 61 ASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRK 140 (494)
Q Consensus 61 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~ 140 (494)
.+-..+.++|++.+++.++-......|+..+....+| +++++++|... ++|+.+||+||.+++.+..++
T Consensus 5 ~SDn~~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e----~~~ae~~g~~a-------~~Fv~sGT~aN~lal~~~~~~ 73 (342)
T COG2008 5 RSDNVAGPTPEMREALAAANAVGDDVYGEDPTTNALE----QRIAELFGKEA-------ALFVPSGTQANQLALAAHCQP 73 (342)
T ss_pred ccCccCCCCHHHHHHHHhccccCCCCCCCCHHHHHHH----HHHHHHhCCce-------EEEecCccHHHHHHHHHhcCC
Confidence 3433445678888888765433334466666666655 45999999943 999999999999999888643
Q ss_pred HHHHHHhcCCCCCCCeEEeCCCcchHHHHH--HHHcCCeeEEEeccCCccccCHHHHHHhhhhC------CeEEEEeeCC
Q 011057 141 WQNKRKAEGKPFDKPNIVTGANVQVCWEKF--ARYFEVELKEVKLSEGYYVMDPVKAVEMVDEN------TICVAAILGS 212 (494)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~--~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~------t~~vv~~~~~ 212 (494)
...||+...+|....+. ...++-....+..+..++.++++++++.|.++ +.++++.+..
T Consensus 74 -------------~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~ 140 (342)
T COG2008 74 -------------GESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTA 140 (342)
T ss_pred -------------CCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeecc
Confidence 25799999999776653 34444222222223234799999999988642 3444443333
Q ss_pred CCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEE
Q 011057 213 TLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVI 289 (494)
Q Consensus 213 ~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~ 289 (494)
|..|++-| |++|+++||++ ++.||+|||--...+..+.+... ++ ..++|++++++.|.++.|. |.++
T Consensus 141 te~GtVy~l~el~~i~~~~k~~------~l~LHmDGAR~~nA~valg~~~~-~~-~~~~D~v~~~~tK~g~~~~--gAiv 210 (342)
T COG2008 141 TEGGTVYPLDELEAISAVCKEH------GLPLHMDGARLANALVALGVALK-TI-KSYVDSVSFCLTKGGGAPV--GAIV 210 (342)
T ss_pred CCCceecCHHHHHHHHHHHHHh------CCceeechHHHHHHHHHcCCCHH-HH-HhhCCEEEEecccCCccee--eeEE
Confidence 46699965 56688889999 99999999875443322222110 11 3479999999999998775 4455
Q ss_pred EeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeec
Q 011057 290 WRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSK 369 (494)
Q Consensus 290 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (494)
+.+.+...+.-.++..+-+. .+....+.+++ +-++..+-+.....|..+++++|.++|.+.+|+++..+
T Consensus 211 ~gn~~~~~~a~~~rK~~Ggl---------~~k~r~laA~~--~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~ 279 (342)
T COG2008 211 FGNRDFAKRARRWRKRAGGL---------MRKARFLAAQG--LYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFP 279 (342)
T ss_pred EcCHHHHHHHHHHHHHhccc---------HhhhhHHHHHH--HHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC
Confidence 55654443322222222211 11111222222 23344444566677778889999999998888999887
Q ss_pred CCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 370 DEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 370 ~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
+ ..|+|.++++. ...+.|...|+.......- ..+...+|++++..++++++++++..+++++
T Consensus 280 ~-~tN~vf~~l~~-------~~i~~l~~~~~~~~~~~~~--~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 280 V-ETNMVFVRLPE-------SAIEALRLAGALFYRGVLI--GAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred C-cccEEEEECCh-------HHHHHHHhhchhheeeeec--cCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 5 78998888743 2236666666654221110 0111479999999999999999998888764
No 158
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=2.5e-21 Score=193.10 Aligned_cols=284 Identities=16% Similarity=0.112 Sum_probs=197.5
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCee
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVEL 178 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (494)
++++.+|+++|+++ ..+++|+|+++++.+++.+.... ++++|+++.+.|..+...++..|+++
T Consensus 64 ~Lr~aia~~~~~~~-----~~I~it~Gs~~~i~~~~~~~~~~------------g~d~vlv~~P~y~~y~~~~~~~g~~v 126 (354)
T PRK04635 64 ELINAYSAYAGVAP-----EQILTSRGADEAIELLIRAFCEP------------GQDSIACFGPTYGMYAISAETFNVGV 126 (354)
T ss_pred HHHHHHHHHhCcCH-----HHEEEeCCHHHHHHHHHHHhcCC------------CCCeEEEcCCChHHHHHHHHHcCCEE
Confidence 45666888899876 45999999999999888776321 12579999999999999899999999
Q ss_pred EEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCc
Q 011057 179 KEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPE 258 (494)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~ 258 (494)
+.+|++++ +.+|++.+++ + +++++|++++|+||||.+.+.+++.++++..+ ++++++|++|..+... ...
T Consensus 127 ~~v~~~~~-~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~-----~~~vivDeay~~~~~~--~s~ 196 (354)
T PRK04635 127 KALPLTAD-YQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTP-----DAIVVVDEAYIEFCPE--YSV 196 (354)
T ss_pred EEEecCCC-CCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCC-----CcEEEEeCchHhhccC--cch
Confidence 99999764 7899998873 4 57899999999999999999999999998753 6899999999865311 010
Q ss_pred ccccccCCCceEEEEcCcccCC-cCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH
Q 011057 259 LEWDFRLPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF 337 (494)
Q Consensus 259 ~~~~~~~~~~D~~~~~~hK~l~-~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~ 337 (494)
....-..+++ .+..+++|+++ ++.++|+++..+. .+.........| . .....+.+++..+..
T Consensus 197 ~~~~~~~~~~-iv~~S~SK~~~l~GlRlG~~i~~~~-~~~~l~~~~~~~------------~---~~~~~~~~a~~~l~~ 259 (354)
T PRK04635 197 ADLLASYPNL-VVLRTLSKAFALAGARCGFTLANEE-LIEILMRVIAPY------------P---VPLPVSEIATQALSE 259 (354)
T ss_pred HHHHhhCCCE-EEEechHHHhhhhHHHHhhhhCCHH-HHHHHHhhcCCC------------C---CCHHHHHHHHHHHhc
Confidence 0000011233 34668889874 7778899886432 221111111111 1 111223344444432
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCc
Q 011057 338 ---EGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHI 414 (494)
Q Consensus 338 ---~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~ 414 (494)
+.+++..+...+.++++.+.|++++++++..+ ..+++.+.++ +..++.+.|.++|+.++.+..+ ...
T Consensus 260 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~g~f~~~~~~-----~~~~~~~~l~~~gv~v~~~~~~---~~~ 329 (354)
T PRK04635 260 AGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEG--NGNYVLAKFD-----DVDAVFKALWDAGIVARAYKDP---RLA 329 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC--CCcEEEEECC-----CHHHHHHHHHHCCEEEEECCCC---CCC
Confidence 33455566677778899999999876776543 4567666653 3568889999999998654322 224
Q ss_pred eEEEEEeccCCChHHHHHHHHHHHH
Q 011057 415 TVLRVVIREDFSRTLAERLVLDITK 439 (494)
Q Consensus 415 ~~lRvs~~~~~t~~~id~~i~~l~~ 439 (494)
.++|++++ +.+++++|+++|++
T Consensus 330 ~~lRis~~---~~e~~~~l~~al~~ 351 (354)
T PRK04635 330 NCIRFSFS---NRAETDKLIGLIRN 351 (354)
T ss_pred CeEEEEeC---CHHHHHHHHHHHHH
Confidence 57999987 78899999888864
No 159
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.89 E-value=3.5e-21 Score=183.31 Aligned_cols=306 Identities=14% Similarity=0.097 Sum_probs=209.7
Q ss_pred HHHHHHHHhhhhcCCCCCcccccccCCChHH-HHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCc
Q 011057 41 AAYQIINDELMLDGNPRLNLASFVTTWMEPE-CDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETA 118 (494)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~ 118 (494)
.+|-.+.+...-...+.. |+.+.++.++|+ +.+++.+++... ...|....|..++.+.+++.+++++|...... .
T Consensus 18 ~vw~e~~~la~e~~~~~~-LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~--~ 94 (420)
T KOG0257|consen 18 YVWTEINRLAAEHKVPNP-LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPD--D 94 (420)
T ss_pred cHHHHHHHHHHhcCCCCc-ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCc--c
Confidence 566666666543333432 688888877775 778888887764 33456666889999999999999888765422 3
Q ss_pred ceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEecc-------CCccccC
Q 011057 119 VGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS-------EGYYVMD 191 (494)
Q Consensus 119 ~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-------~~~~~~d 191 (494)
.+.+|+|+.+++..++++..+. +++|++-++.+.++....++.|..++.|+.. .++|.+|
T Consensus 95 eVlVT~GA~~ai~~~~~~l~~~-------------GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D 161 (420)
T KOG0257|consen 95 EVLVTAGANEAISSALLGLLNP-------------GDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLD 161 (420)
T ss_pred cEEEecCchHHHHHHHHHHcCC-------------CCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCC
Confidence 5999999999999888888552 3799999999999999999999999999876 4568999
Q ss_pred HHHHHHhhhhCCeEEEEeeCCCCccccc---CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCc-ccc--cccC
Q 011057 192 PVKAVEMVDENTICVAAILGSTLNGEFE---DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPE-LEW--DFRL 265 (494)
Q Consensus 192 ~~~L~~~i~~~t~~vv~~~~~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~--~~~~ 265 (494)
.+.|+.+++++|++|+++.|+||||.+. .|++|++||++| |++++.|++|...+. ...+ .+. .=++
T Consensus 162 ~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~------~~lvisDevYe~~v~--d~~~h~r~aslPgm 233 (420)
T KOG0257|consen 162 PEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKH------GLLVISDEVYEWLVY--DGNKHIRIASLPGM 233 (420)
T ss_pred hHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHC------CEEEEEhhHhHHHhh--CCCcceeeecCCch
Confidence 9999999999999999999999999995 478899999999 999999999987542 1110 110 0011
Q ss_pred CCceEEEEcCccc-CCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcch--HHHHHHHHHHHHhcHh--H-
Q 011057 266 PLVKSINVSGHKY-GLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGS--SQVIAQYYQLIRLGFE--G- 339 (494)
Q Consensus 266 ~~~D~~~~~~hK~-l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~--~~~~a~~~al~~l~~~--g- 339 (494)
...-.-+.|+.|+ ++.++.+||++. ++..+......+.+ +.+.++.+. ..+.++...+.....+ .
T Consensus 234 ~ertitvgS~gKtf~~TGWrlGW~ig-p~~L~~~~~~vh~~--------~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~ 304 (420)
T KOG0257|consen 234 YERTITVGSFGKTFGVTGWRLGWAIG-PKHLYSALFPVHQN--------FVFTCPTPIQEASAAAFALELACLQPGGSYF 304 (420)
T ss_pred hheEEEeccccceeeeeeeeeeeeec-hHHhhhhHHHHhhc--------cccccCcHHHHHHHHHHhhhhhccCCcchhH
Confidence 1233334456664 577899999987 33222111111111 111111111 1111122222211112 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEec
Q 011057 340 YRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLK 381 (494)
Q Consensus 340 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~ 381 (494)
..++.+.+.++++.|.+.|.+++ +++..+. ...++...+.
T Consensus 305 ~~~~~~~y~~krdil~k~L~~lg-~~v~~p~-gayyl~adfs 344 (420)
T KOG0257|consen 305 ITELVKEYKEKRDILAKALEELG-LKVTGPE-GAYYLWADFS 344 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-CccccCC-CceEEEEecc
Confidence 34477888999999999999995 8887765 4555555554
No 160
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.7e-20 Score=190.37 Aligned_cols=345 Identities=13% Similarity=0.008 Sum_probs=224.4
Q ss_pred CCCcccccccCCC-hHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHH
Q 011057 56 PRLNLASFVTTWM-EPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAG 134 (494)
Q Consensus 56 ~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~ 134 (494)
..+++..+.+..+ ++.+.+++.+++......|....+..++++.+.+++++.+|.+.. ...+++|+|+++|+.+++
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~---~~~i~~t~G~~~al~~~~ 110 (402)
T PRK06107 34 SIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYA---DNEITVGGGAKQAIFLAL 110 (402)
T ss_pred CEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC---hhhEEEeCCHHHHHHHHH
Confidence 3355555555433 567888888887654455666668889999999999998888542 235899999999999887
Q ss_pred HHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEecc-CCccccCHHHHHHhhhhCCeEEEEeeCCC
Q 011057 135 LAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS-EGYYVMDPVKAVEMVDENTICVAAILGST 213 (494)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~~t~~vv~~~~~~ 213 (494)
.+... .++.|++++++|..+..++...|..++.++++ ++++.+|++++++++.+++++|++++|+|
T Consensus 111 ~~~~~-------------~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~N 177 (402)
T PRK06107 111 MATLE-------------AGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSN 177 (402)
T ss_pred HHhcC-------------CCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCC
Confidence 65422 12689999998888888888888888888886 34467999999999988889999999999
Q ss_pred CcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccc----cCCCceEEEEcCcccCC-cCCce
Q 011057 214 LNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF----RLPLVKSINVSGHKYGL-VYAGI 285 (494)
Q Consensus 214 ~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~----~~~~~D~~~~~~hK~l~-~p~g~ 285 (494)
|||.+.+ +++|+++|++++ ++++++|++|+.... ......... ....-..+..+++|.+. ++.++
T Consensus 178 PtG~~~s~~~~~~l~~~a~~~~-----~~~iI~De~y~~l~~--~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi 250 (402)
T PRK06107 178 PTGAVYSRAELRALADVLLRHP-----HVLVLTDDIYDHIRF--DDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRI 250 (402)
T ss_pred CCCcCcCHHHHHHHHHHHHHcC-----CeEEEEehhcccccc--CCCCCCCHHHhCcCccCCEEEEeccchhhcCcccce
Confidence 9998865 566777788852 799999999986421 111111000 11112344456789874 77788
Q ss_pred EEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh--cHhHHHHHHHHHHHHHHHHHHHHhhCCC
Q 011057 286 GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL--GFEGYRNVMENCHENAMVLKEGLEKTGR 363 (494)
Q Consensus 286 G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l--~~~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (494)
||++...+ .+ ..+.....+.. . ..+.+.+.++...+ +...+++..+.+.++++.+.+.|+++++
T Consensus 251 G~~~~~~~-~~-~~~~~~~~~~~---------~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g 316 (402)
T PRK06107 251 GYAAGPAD-LI-AAINKLQSQSS---------S---CPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPG 316 (402)
T ss_pred eeeecCHH-HH-HHHHHHHHhcc---------c---CCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99875432 22 21111111110 0 12233455555554 2334566677778888899999988866
Q ss_pred eEEeecCCCccEEEE-EecC------CCC---CCHHHHHHHH-HhcCceeeccccCCCCCCceEEEEEeccCCChHHHHH
Q 011057 364 FNIVSKDEGVPLVAF-SLKD------NKR---HDEFEVAELL-RRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAER 432 (494)
Q Consensus 364 ~~~~~~~~~~~~v~f-~~~~------~~~---~~~~~l~~~L-~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~ 432 (494)
+.+..+ ..+++.| ++.. +.+ .+..++++.| .++|+.+....... ...++|+++.. +.++++.
T Consensus 317 ~~~~~p--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg---~~~~iRis~~~--~~e~l~~ 389 (402)
T PRK06107 317 LSCLVP--DGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYG---LSPYFRLSIAT--SLETLEE 389 (402)
T ss_pred CcccCC--CcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccC---CCCeEEEEeCC--CHHHHHH
Confidence 765543 3455443 3311 111 1456777655 56899875433221 13579999984 5677777
Q ss_pred HHHHHHHHHHHH
Q 011057 433 LVLDITKVLHEL 444 (494)
Q Consensus 433 ~i~~l~~~~~~l 444 (494)
.++.|.++++++
T Consensus 390 ~l~~l~~~l~~~ 401 (402)
T PRK06107 390 ACARIERAVAAL 401 (402)
T ss_pred HHHHHHHHHHhc
Confidence 777666665543
No 161
>PRK07908 hypothetical protein; Provisional
Probab=99.89 E-value=9.3e-21 Score=188.81 Aligned_cols=319 Identities=15% Similarity=0.063 Sum_probs=207.9
Q ss_pred CcccccccCC-ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHH
Q 011057 58 LNLASFVTTW-MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLA 136 (494)
Q Consensus 58 ~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a 136 (494)
+.|.....++ +++.+.+++.+++.. ...|....+..+ +++++++++|.++ ..+++|+|+++++.+++.
T Consensus 25 ~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~----lr~aia~~~~~~~-----~~I~it~Ga~~al~~~~~- 93 (349)
T PRK07908 25 LDFAVNVRHDTPPEWLRERLAARLGD-LAAYPSTEDERR----ARAAVAARHGRTP-----DEVLLLAGAAEGFALLAR- 93 (349)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHhhH-hhcCCCccchHH----HHHHHHHHhCcCh-----hhEEECCCHHHHHHHHHh-
Confidence 4444444433 456688888877654 223333334444 5566888888865 359999999999987665
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcc
Q 011057 137 FKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNG 216 (494)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG 216 (494)
+ . .+.+++..+++..+...++..|++++.++++++ +.+|++++ .++++++++++++||||
T Consensus 94 l-~--------------~~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~-~~~d~~~l----~~~~~~i~l~np~NPTG 153 (349)
T PRK07908 94 L-R--------------PRRAAVVHPSFTEPEAALRAAGIPVHRVVLDPP-FRLDPAAV----PDDADLVVIGNPTNPTS 153 (349)
T ss_pred c-C--------------CCeEEEeCCCChHHHHHHHHcCCEEEeeccCcc-cCcChhHh----ccCCCEEEEcCCCCCCC
Confidence 2 1 135667788888888888999999999999865 78888855 45688999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEE-cCcccC-CcCCceEEEEEeCCC
Q 011057 217 EFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINV-SGHKYG-LVYAGIGWVIWRNKE 294 (494)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~hK~l-~~p~g~G~~~~~~~~ 294 (494)
.+.+.++|.++|+ + +.++++|++|+.+... ..+... .... -+++.+ +++|.+ +++.++|+++... .
T Consensus 154 ~~~~~~~l~~l~~-~------~~~iIvDe~y~~~~~~-~~~~l~-~~~~--~~~i~i~S~SK~~~l~GlRiG~~~~~~-~ 221 (349)
T PRK07908 154 VLHPAEQLLALRR-P------GRILVVDEAFADAVPG-EPESLA-GDDL--PGVLVLRSLTKTWSLAGLRVGYALGAP-D 221 (349)
T ss_pred CCcCHHHHHHHHh-c------CCEEEEECcchhhccC-Cccccc-cccC--CCEEEEeecccccCCccceeeeeecCH-H
Confidence 9999999999995 4 6789999999865311 001111 1111 234443 778865 4788899998643 2
Q ss_pred CcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCcc
Q 011057 295 DLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVP 374 (494)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 374 (494)
.+.........| ..+.....++...+.-.....+++..++..++++++.+.|+++ ++++..++ ..+
T Consensus 222 ~~~~~~~~~~~~------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~-~g~ 287 (349)
T PRK07908 222 VLARLTRGRAHW------------PVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPA-AAP 287 (349)
T ss_pred HHHHHHhcCCCC------------CccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCC-Cce
Confidence 222111111111 0111111111111111122345667778888899999999988 48776544 567
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 375 LVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
++.+.++. ...+.+.|.++|+.+....... ..+..++|++++ +.+++++|+++|++++.
T Consensus 288 ~~~~~~~~-----~~~~~~~l~~~gI~v~~g~~f~-~~~~~~vRis~~---~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 288 FVLVRVPD-----AELLRKRLRERGIAVRRGDTFP-GLDPDYLRLAVR---PRAEVPVLVQALAEILK 346 (349)
T ss_pred EEEEECCc-----HHHHHHHHHhCCEEEEECCCCC-CCCCCeEEEEeC---CCccHHHHHHHHHHHHh
Confidence 77777642 4688889999999885433211 113568999996 67889999999988754
No 162
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=6.9e-21 Score=191.14 Aligned_cols=318 Identities=14% Similarity=0.036 Sum_probs=215.7
Q ss_pred CChHHHHHHHHHHhcc---cCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINK---NYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQN 143 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~---~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~ 143 (494)
+++|.+.+++.+++.. ....| ..++...+++.+.+++.+..|.+.+ ...+++|+|+++++.+++.++.+.
T Consensus 39 ~~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~---~~~I~it~G~~~~l~~~~~~~~~~--- 111 (368)
T PRK03317 39 PPSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLT---VENVWAANGSNEILQQLLQAFGGP--- 111 (368)
T ss_pred CCCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCC---hhhEEECCCHHHHHHHHHHHhcCC---
Confidence 4567788888877653 22233 2346677888877777776676432 245899999999999888877431
Q ss_pred HHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh-CCeEEEEeeCCCCcccccCHH
Q 011057 144 KRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAAILGSTLNGEFEDVK 222 (494)
Q Consensus 144 ~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~~~~~~tG~~~~l~ 222 (494)
++.|+++.++|..+..+++..|.+++.++.+++ +.+|++++++++.+ ++++|++++++||||.+.+.+
T Consensus 112 ----------gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~ 180 (368)
T PRK03317 112 ----------GRTALGFVPSYSMHPIIARGTHTEWVEGPRAAD-FTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLD 180 (368)
T ss_pred ----------CCEEEEeCCChHHHHHHHHhcCCeeEEcccCCC-CCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHH
Confidence 257999999999999999999998888876554 78999999999874 678889999999999999999
Q ss_pred HHHHHHHHhhcccCCCceEEEecccccccccccCCcccccc-cCCCceEEEEcCcccCC-cCCceEEEEEeCCCCccccc
Q 011057 223 LLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF-RLPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEEL 300 (494)
Q Consensus 223 ~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~hK~l~-~p~g~G~~~~~~~~~~~~~~ 300 (494)
++.++++.+ ++++++|++|+.+.. ......... ....-.++..++.|.+. ++.++|+++... ..+ ..+
T Consensus 181 ~l~~l~~~~------~~~lI~DE~y~~~~~--~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~-~~~-~~l 250 (368)
T PRK03317 181 DVEAILDAA------PGIVVVDEAYAEFRR--SGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP-AVV-DAL 250 (368)
T ss_pred HHHHHHHHC------CceEEEeCCchhhcc--cCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH-HHH-HHH
Confidence 999999999 999999999987531 110000011 11111244457889774 677889987633 222 211
Q ss_pred ccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc-HhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEE
Q 011057 301 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-FEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFS 379 (494)
Q Consensus 301 ~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~ 379 (494)
... .. .+ . .+.+.+.++...+. .+.+.+..++..+.++++.+.|++.+ +++..+ ..+++.|.
T Consensus 251 ~~~----~~---~~----~---~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~~~~~~ 313 (368)
T PRK03317 251 RLV----RL---PY----H---LSAVTQAAARAALRHADELLASVAALRAERDRVVAWLRELG-LRVAPS--DANFVLFG 313 (368)
T ss_pred Hhc----CC---CC----C---CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CEeCCC--CCcEEEEe
Confidence 110 00 00 1 11223333333332 23344556667778888999999885 776543 45666553
Q ss_pred ecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 380 LKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 380 ~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
... +...+.+.|.++|+.+..+. ...++|++++ +.++++++++.|+++++
T Consensus 314 ~~~----~~~~~~~~l~~~Gv~v~~~~------~~~~iRi~~~---~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 314 RFA----DRHAVWQGLLDRGVLIRDVG------IPGWLRVTIG---TPEENDAFLAALAEVLA 363 (368)
T ss_pred ccC----CHHHHHHHHHHCCEEEEeCC------CCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 211 46789999999999886432 1347999986 67889999999888764
No 163
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.89 E-value=2.7e-20 Score=188.97 Aligned_cols=341 Identities=15% Similarity=0.055 Sum_probs=217.1
Q ss_pred CCcccccccC-CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHH
Q 011057 57 RLNLASFVTT-WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGL 135 (494)
Q Consensus 57 ~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~ 135 (494)
.++|..+.++ ++++.+.+++.+... ....|....+..++++.+.+++.. .|...+ ...+++|+|+++++.+++.
T Consensus 32 ~i~l~~~~~~~~~~~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~---~~~i~~t~G~~~al~~~~~ 106 (397)
T PRK07568 32 VYHLNIGQPDIKTPEVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYKK-WGIDVE---PDEILITNGGSEAILFAMM 106 (397)
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHHH-hCCCCC---cceEEEcCChHHHHHHHHH
Confidence 3444554444 345667777766543 233455555777777776666653 344321 2358899999999988776
Q ss_pred HHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-Cccc-cCHHHHHHhhhhCCeEEEEeeCCC
Q 011057 136 AFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYV-MDPVKAVEMVDENTICVAAILGST 213 (494)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~-~d~~~L~~~i~~~t~~vv~~~~~~ 213 (494)
++.. .+++|+++++.|..+...++..|++++.++++. +++. .|+++|++++++++++|++++|+|
T Consensus 107 ~l~~-------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~N 173 (397)
T PRK07568 107 AICD-------------PGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGN 173 (397)
T ss_pred HhcC-------------CCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCC
Confidence 6522 125799988888888888888999999999863 3234 368999999988899999999999
Q ss_pred CcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc--ccc-cCCCceEEEEcCcccCC-cCCceE
Q 011057 214 LNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE--WDF-RLPLVKSINVSGHKYGL-VYAGIG 286 (494)
Q Consensus 214 ~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~~~~~D~~~~~~hK~l~-~p~g~G 286 (494)
|||.+.+ +++|+++|+++ ++++++|++|+.+.. ...... ..+ ....-..+..+++|.+. ++.++|
T Consensus 174 PtG~~~~~~~~~~i~~~~~~~------~~~ii~De~y~~~~~--~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G 245 (397)
T PRK07568 174 PTGVVYTKEELEMLAEIAKKH------DLFLISDEVYREFVY--DGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIG 245 (397)
T ss_pred CCCccCCHHHHHHHHHHHHHC------CcEEEEeccchhccc--CCCCccChhhcCCCcCCEEEEecchhhccCCCcceE
Confidence 9999864 78899999999 999999999987532 111111 111 11112245567889765 578899
Q ss_pred EEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh--cHhHHHHHHHHHHHHHHHHHHHHhhCCCe
Q 011057 287 WVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL--GFEGYRNVMENCHENAMVLKEGLEKTGRF 364 (494)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l--~~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 364 (494)
++++.++..+......... . + + .+.+.+.++..++ +++.+++..+.+.++++.+.+.|++++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~-------~--~--~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (397)
T PRK07568 246 CLISKNKELIAAAMKLCQA-------R--L--S---PPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGV 311 (397)
T ss_pred EEecCCHHHHHHHHHHhhc-------c--C--C---CCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9987544332211111000 0 0 1 1112233333333 34456667777888899999999988766
Q ss_pred EEeecCCCccE-EEEEecCCCCCCHHHHHHHHHh------cCceeeccccCCC--CCCceEEEEEeccCCChHHHHHHHH
Q 011057 365 NIVSKDEGVPL-VAFSLKDNKRHDEFEVAELLRR------FGWIVPAYTMPAD--AQHITVLRVVIREDFSRTLAERLVL 435 (494)
Q Consensus 365 ~~~~~~~~~~~-v~f~~~~~~~~~~~~l~~~L~~------~Gi~v~~~~~~~~--~~~~~~lRvs~~~~~t~~~id~~i~ 435 (494)
.+..+ ..++ +.++++. .+..++++.|.+ +|+.+........ ..+..++|+++.. +.++++..++
T Consensus 312 ~~~~p--~g~~~~~~~l~~---~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~--~~~~~~~~~~ 384 (397)
T PRK07568 312 VCEKP--KGAFYIIAKLPV---DDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL--NEEDLKRAME 384 (397)
T ss_pred eecCC--CcceEEEEecCC---CCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC--CHHHHHHHHH
Confidence 65443 3344 4556643 256788888865 5887754321111 1134689999873 5677887777
Q ss_pred HHHHHHHHH
Q 011057 436 DITKVLHEL 444 (494)
Q Consensus 436 ~l~~~~~~l 444 (494)
.|++++++.
T Consensus 385 ~l~~~l~~~ 393 (397)
T PRK07568 385 ILKEALEKY 393 (397)
T ss_pred HHHHHHHHh
Confidence 777766543
No 164
>PRK07505 hypothetical protein; Provisional
Probab=99.89 E-value=2.8e-20 Score=188.80 Aligned_cols=344 Identities=15% Similarity=0.096 Sum_probs=211.3
Q ss_pred cCCCCCcccccccC--CChHHHHHHHHHHhcccC-CCCCCC--hhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 53 DGNPRLNLASFVTT--WMEPECDKLMMAAINKNY-VDMDEY--PVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 53 ~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~-~~~~~~--~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
+|+.++++.+..+. +.+|++.+++.+.++... .++..+ ....+...++++.|++++|. . .+++++|+
T Consensus 44 ~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~-------~~~~~sG~ 115 (402)
T PRK07505 44 DGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA-S-------VLTFTSCS 115 (402)
T ss_pred CCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC-C-------EEEECChH
Confidence 56666666553322 557999999998887532 122222 23456677889999999987 3 66677788
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCC-eEEeCCCcchHHHHH--HHHcCCeeEEEeccCCccccCHHHHHHhhhhCCe
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKP-NIVTGANVQVCWEKF--ARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTI 204 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~-~vi~~~~~h~s~~~~--~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~ 204 (494)
+|+..++..+..... ...+. .|+.+...|.++... ....+.+++.+|. .|+++|+++++++++
T Consensus 116 ~a~~~ai~~~~~~~~--------~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~------~d~~~l~~~~~~~~~ 181 (402)
T PRK07505 116 AAHLGILPLLASGHL--------TGGVPPHMVFDKNAHASLNILKGICADETEVETIDH------NDLDALEDICKTNKT 181 (402)
T ss_pred HHHHHHHHHHHhccc--------CCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC------CCHHHHHHHHhcCCC
Confidence 999877766543110 00122 345566888876432 2223556666663 478999999987888
Q ss_pred EEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccc-cccccCCccccccc--CCCceEEEEcCcccCCc
Q 011057 205 CVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGF-IAPFLYPELEWDFR--LPLVKSINVSGHKYGLV 281 (494)
Q Consensus 205 ~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~-~~~~~~~~~~~~~~--~~~~D~~~~~~hK~l~~ 281 (494)
+++++.|++++|.+.|+++|.++|+++ ++++++|++|+.+ ..++........+. .....++..++.|.+..
T Consensus 182 ~~vl~~p~~~~G~~~~~~~i~~l~~~~------~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~ 255 (402)
T PRK07505 182 VAYVADGVYSMGGIAPVKELLRLQEKY------GLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGA 255 (402)
T ss_pred EEEEEecccccCCcCCHHHHHHHHHHc------CCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhc
Confidence 999999999999999999999999999 9999999998532 11111110000112 22345666678897754
Q ss_pred CCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhC
Q 011057 282 YAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKT 361 (494)
Q Consensus 282 p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~ 361 (494)
+ | |++++.++... +.+.. ....+++.++.+.....++.++++.+..+.+.+..+++.++.+++.+.+...
T Consensus 256 ~-G-g~~~~~~~~~~-~~~~~-------~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 325 (402)
T PRK07505 256 S-G-GVIMLGDAEQI-ELILR-------YAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE 325 (402)
T ss_pred c-C-eEEEeCCHHHH-HHHHH-------hCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc
Confidence 3 3 66554443222 21111 0111222234434455556666665555555555555555544443332211
Q ss_pred CCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 362 GRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 362 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
. ......+..+.+.. ..+..++.++|.++|++++....|....+..++|+++...+|+++++++++.|++++
T Consensus 326 ~------~g~~~~i~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l 397 (402)
T PRK07505 326 Q------SGSFLPIRLIYIGD--EDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEIL 397 (402)
T ss_pred C------CCCCCCEEEEEeCC--HHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHH
Confidence 0 11123333333321 123568999999999998766555433344689999999999999999999998886
Q ss_pred H
Q 011057 442 H 442 (494)
Q Consensus 442 ~ 442 (494)
+
T Consensus 398 ~ 398 (402)
T PRK07505 398 D 398 (402)
T ss_pred H
Confidence 4
No 165
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.89 E-value=2.3e-20 Score=184.27 Aligned_cols=328 Identities=16% Similarity=0.109 Sum_probs=209.3
Q ss_pred HHHHHHHHHHhhhhcCCCCCcccccccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCc
Q 011057 39 KEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETA 118 (494)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~ 118 (494)
.+..|+++++.+...|...+ ..|.....+|.+.++..++++... +..++++++++++|+++|.++ .
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~--~~ylgl~~~~~~~~~~~~~~~~~~-------g~~~~~~~Le~~lA~~~g~~~-----e 72 (346)
T TIGR03576 7 REKALEIIREKISRGGRDSL--YDLTGLAGGFKIDEEDLELLETYV-------GPAIFEEKVQELGREHLGGPE-----E 72 (346)
T ss_pred HHHHHHHHHHHHhccCCccc--cccccCCCChhHHHHHHHHHHHhc-------CCHHHHHHHHHHHHHHcCCCc-----c
Confidence 46778889888876654433 333334457888888888876642 445788889999999999965 3
Q ss_pred ceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeC---CCcchHHHHHHHHcCCeeEEEeccCCccccCHHHH
Q 011057 119 VGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTG---ANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKA 195 (494)
Q Consensus 119 ~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~---~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L 195 (494)
.+++++||++||..++.++..+ +++|+++ .+.|.++...+++.|+++..+ .|++++
T Consensus 73 ~ilv~~gg~~a~~~~~~al~~~-------------gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~--------~~l~~l 131 (346)
T TIGR03576 73 KILVFNRTSSAILATILALEPP-------------GRKVVHYLPEKPAHPSIPRSCKLAGAEYFES--------DELSEL 131 (346)
T ss_pred eEEEECCHHHHHHHHHHHhCCC-------------CCEEEECCCCCCCchhHHHHHHHcCCEEecc--------CCHHHH
Confidence 4899999999999888877431 2567653 579999999999999875322 234554
Q ss_pred HHhhhhCCeEEEEeeCCCCcccc---cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEE
Q 011057 196 VEMVDENTICVAAILGSTLNGEF---EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSIN 272 (494)
Q Consensus 196 ~~~i~~~t~~vv~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~ 272 (494)
+. .+++++|++ .+++++|.+ .||++|+++|+++ +++++||+||+.++........... .++|+++
T Consensus 132 ~~--~~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~------~~~livDEAy~~~~~~~~~~~~~~~---~~~divv 199 (346)
T TIGR03576 132 KK--IDGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSK------EAIVLVDDASGARVRRLYGQPPALD---LGADLVV 199 (346)
T ss_pred hh--CcCceEEEE-ECCCCCCcccCHHHHHHHHHHHHHc------CCEEEEECCccccccccCCCCCHHH---cCCcEEE
Confidence 33 245676666 467889998 7899999999999 9999999999976532111111111 1468888
Q ss_pred EcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHH
Q 011057 273 VSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAM 352 (494)
Q Consensus 273 ~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~ 352 (494)
.+++|++ ++...|+++.+. ..+ +.+.. ....+. .+.+.....+..++|+.+. .+.+.+.+.++++
T Consensus 200 ~s~SKal-aG~r~G~v~~~~-~li-~~l~~-------~~~~~~--~s~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~ 264 (346)
T TIGR03576 200 TSTDKLM-DGPRGGLLAGRK-ELV-DKIKS-------VGEQFG--LEAQAPLLAAVVRALEEFE---LSRIRDAFKRKEE 264 (346)
T ss_pred eccchhc-cccceEEEEeCH-HHH-HHHHH-------hhcCcc--cCccHHHHHHHHHHHhhcc---HHHHHHHHHHHHH
Confidence 8999965 444578877544 222 22111 111111 1122233334444444332 2445566677777
Q ss_pred HHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCC-HHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChH---
Q 011057 353 VLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHD-EFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRT--- 428 (494)
Q Consensus 353 ~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~-~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~--- 428 (494)
++.+.+.. +.+..+ ..+++.+.+.+ .+ .+...+.|.++|+.+....... ....++|+++.. ++
T Consensus 265 ~~~~~l~~---~~~~~~--~~~f~~~~~~~---~~~~~~~~~ll~~~gV~v~~~~~f~--~~~~~vRis~~~---~~~~~ 331 (346)
T TIGR03576 265 VYLRLFDK---LNVERT--PTGFVIKGVEE---EKLIEIGLDLLRNYGIITITAVGMP--GASKTLRFDLAA---KDAER 331 (346)
T ss_pred HHHHHHHh---CCCCcC--CCeEEEEeCCC---CCHHHHHHHHHHhCCEEEeCCcccC--CCCCeEEEEEec---ChHHh
Confidence 77777774 333332 34576666643 12 3455567778899876533221 124589999983 34
Q ss_pred -HHHHHHHHHHHHH
Q 011057 429 -LAERLVLDITKVL 441 (494)
Q Consensus 429 -~id~~i~~l~~~~ 441 (494)
+++.|+++|++.+
T Consensus 332 ~~~~~~~~al~~~~ 345 (346)
T TIGR03576 332 IGDDYLVEAVKDSL 345 (346)
T ss_pred cCHHHHHHHHHhcc
Confidence 6888888887643
No 166
>PRK09148 aminotransferase; Validated
Probab=99.89 E-value=5.3e-20 Score=186.77 Aligned_cols=350 Identities=14% Similarity=0.025 Sum_probs=218.7
Q ss_pred cCCCCCcccccccCC-ChHHHHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHH
Q 011057 53 DGNPRLNLASFVTTW-MEPECDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAI 130 (494)
Q Consensus 53 ~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~ 130 (494)
.+.+.++|..+.++. +++.+.+.+.+.++.. ...|....+..++++.+.+++.+.+|.+.+. ...+++|+|+++++
T Consensus 28 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~~I~it~G~~~al 105 (405)
T PRK09148 28 AGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNP--DTQVVATLGSKEGF 105 (405)
T ss_pred cCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEcCChHHHH
Confidence 344455666555543 3456667777666432 2345555578889989888888877865321 01489999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCC-ccccCHHHHHHhhhhCCeEEEEe
Q 011057 131 MLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEG-YYVMDPVKAVEMVDENTICVAAI 209 (494)
Q Consensus 131 ~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~L~~~i~~~t~~vv~~ 209 (494)
.+++.++... ++.|++++++|..+...+...|++++.++++.+ .+..+++++.+...+++++|+++
T Consensus 106 ~~~~~~l~~~-------------gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~ 172 (405)
T PRK09148 106 ANMAQAITAP-------------GDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVN 172 (405)
T ss_pred HHHHHHhcCC-------------CCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEe
Confidence 9887776331 268999999999988888999999999998743 23344444444444678899999
Q ss_pred eCCCCcccccCH---HHHHHHHHHhhcccCCCceEEEecccccccccccCCccc--ccc-cCCCceEEEEcCcccCC-cC
Q 011057 210 LGSTLNGEFEDV---KLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE--WDF-RLPLVKSINVSGHKYGL-VY 282 (494)
Q Consensus 210 ~~~~~tG~~~~l---~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~~~~~D~~~~~~hK~l~-~p 282 (494)
+|+||||.+.+. ++|.++|+++ ++++++|++|+.+.. ...... ..+ ......++..++.|.+. ++
T Consensus 173 ~P~NPtG~~~s~~~l~~l~~~a~~~------~~~ii~De~Y~~~~~--~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pG 244 (405)
T PRK09148 173 YPSNPTAYVADLDFYKDVVAFAKKH------DIIILSDLAYSEIYF--DGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAG 244 (405)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHc------CeEEEEeccchhhhc--CCCCCCChhhCCCccCcEEEEeccccccCCcc
Confidence 999999999775 6788899999 999999999987532 110000 011 11223445678889775 77
Q ss_pred CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc--HhHHHHHHHHHHHHHHHHHHHHhh
Q 011057 283 AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--FEGYRNVMENCHENAMVLKEGLEK 360 (494)
Q Consensus 283 ~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~--~~g~~~~~~~~~~~a~~l~~~L~~ 360 (494)
.++||++... ..+ ..+.....+... + ...+.+.++...+. ...+++..+.+.++++++.+.|++
T Consensus 245 lR~G~~v~~~-~~i-~~l~~~~~~~~~---------~---~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~ 310 (405)
T PRK09148 245 WRMGFAVGNE-RLI-AALTRVKSYLDY---------G---AFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGR 310 (405)
T ss_pred hheeeeeCCH-HHH-HHHHHHHHHhcc---------C---CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899998533 222 221111111100 0 11223444444442 344566677778888999999998
Q ss_pred CCCeEEeecCCCccEEEEEecCCC-CCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 361 TGRFNIVSKDEGVPLVAFSLKDNK-RHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~~-~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
.+ +.+..+. ...++.+.+++.. ..+..++.+.|. ++|+.+....... ..+..++|+++.. ..++++..++.|.
T Consensus 311 ~~-~~~~~p~-~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-~~~~~~~Ri~~~~--~~~~l~~al~~l~ 385 (405)
T PRK09148 311 AG-WDIPPPA-ASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFG-EHGDGYVRIALVE--NEQRIRQAARNIK 385 (405)
T ss_pred cC-CccCCCC-eeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 75 6544332 3445556654321 234678888765 6899875433221 1234689999862 4455554444444
Q ss_pred HHHHHH
Q 011057 439 KVLHEL 444 (494)
Q Consensus 439 ~~~~~l 444 (494)
++++..
T Consensus 386 ~~l~~~ 391 (405)
T PRK09148 386 RFLSSA 391 (405)
T ss_pred HHHHHH
Confidence 444433
No 167
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=2.2e-20 Score=187.32 Aligned_cols=328 Identities=13% Similarity=0.005 Sum_probs=218.8
Q ss_pred cccccccC-CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHH
Q 011057 59 NLASFVTT-WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAF 137 (494)
Q Consensus 59 ~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~ 137 (494)
+|..+.+. ++++.+.+++.+.+.. ...|.. +... ++++.+|+++++++ ..+++|+|+++++..++.++
T Consensus 36 ~l~~~~~~~~~~~~~~~a~~~~~~~-~~~Y~~-~~~~----~Lr~~ia~~~~~~~-----~~I~it~G~~~~l~~~~~~~ 104 (369)
T PRK08153 36 RIGANESGFGPSPSVIAAMREAAAE-IWKYGD-PENH----DLRHALAAHHGVAP-----ENIMVGEGIDGLLGLIVRLY 104 (369)
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHH-hhcCCC-CccH----HHHHHHHHHhCCCH-----HHEEEcCCHHHHHHHHHHHh
Confidence 44443333 3466788887766542 122321 1233 46666888888865 45999999999998777765
Q ss_pred HHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhh-hCCeEEEEeeCCCCcc
Q 011057 138 KRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVD-ENTICVAAILGSTLNG 216 (494)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-~~t~~vv~~~~~~~tG 216 (494)
... ++.|+++.++|+.+...++..|++++.+|.+.+ .+|++++++.+. .++++|++++|+||||
T Consensus 105 ~~~-------------gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~--~~~~~~l~~~~~~~~~~~i~l~~P~NPtG 169 (369)
T PRK08153 105 VEP-------------GDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD--REDLDALLDAARRENAPLVYLANPDNPMG 169 (369)
T ss_pred cCC-------------CCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC--CCCHHHHHHHhcccCCcEEEEeCCCCCCC
Confidence 321 268999999999998888899999999998664 589999987764 5788999999999999
Q ss_pred cccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc-CCCceEEEEcCcccC-CcCCceEEEEEeCCC
Q 011057 217 EFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYG-LVYAGIGWVIWRNKE 294 (494)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~hK~l-~~p~g~G~~~~~~~~ 294 (494)
.+.+.+++.++++.+++ ++++++|++|+.+.. . ... ..+. ...-.++..++.|.+ +++.++||++... .
T Consensus 170 ~~~~~~~l~~l~~~~~~----~~~lI~DE~y~~~~~--~-~~~-~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~-~ 240 (369)
T PRK08153 170 SWHPAADIVAFIEALPE----TTLLVLDEAYCETAP--A-GAA-PPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAP-G 240 (369)
T ss_pred CCCCHHHHHHHHHhCCC----CcEEEEeCchhhhcC--c-ccc-hhhhhcCCCEEEEecchHhccCcchheeeeecCH-H
Confidence 99999999998876532 789999999986531 1 101 0111 111234556777876 4788899998643 2
Q ss_pred CcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCc
Q 011057 295 DLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGV 373 (494)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 373 (494)
.+ ..+...... .+ .+.+++.++...+.. +.+++..+...++++++.+.|++.+ +... +. ..
T Consensus 241 ~~-~~l~~~~~~-----------~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g-~~~~-p~-~~ 302 (369)
T PRK08153 241 TI-KAFDKVRNH-----------FG---MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARANG-LTPL-PS-AT 302 (369)
T ss_pred HH-HHHHHhhcC-----------CC---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccC-CC-cC
Confidence 22 211111110 01 123345555555532 3355666777788889999998875 6544 22 45
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 374 PLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 374 ~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
+++.+.+.. .......+.++|.++|+.++. |....+..++|+++. +.+++++|+++|++++..+++
T Consensus 303 ~f~~~~~~~-~~~~a~~l~~~l~~~Gi~v~~---p~~~~~~~~iRis~~---~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 303 NFVAIDCGR-DGAFARAVLDGLIARDIFVRM---PGVAPLDRCIRVSCG---PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred cEEEEECCC-CcccHHHHHHHHHHCCeEEee---CCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHHHhhc
Confidence 666666532 234577899999999998732 222223458999987 789999999999998876653
No 168
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.89 E-value=3.4e-20 Score=189.19 Aligned_cols=350 Identities=15% Similarity=0.151 Sum_probs=215.0
Q ss_pred cCCCCCccccccc--CCCh----HHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecCh
Q 011057 53 DGNPRLNLASFVT--TWME----PECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGS 126 (494)
Q Consensus 53 ~~~~~~~~~~~~~--~~~~----p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~gg 126 (494)
.|.+.++|..+.+ +..+ ..+.+++.+++..+...|..+++..+++++ +++++|.+. +++|+||
T Consensus 34 ~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~~~g~~~Lrea----ia~~~~~~~-------vv~t~gg 102 (460)
T PRK13238 34 AGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYYRLEDA----VKDIFGYPY-------TIPTHQG 102 (460)
T ss_pred cCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCCCCCHHHHHHH----HHHHhCCCc-------EEECCCH
Confidence 3444455555443 2222 246777777776544567777788887765 778888754 8999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-------Ccc--ccCHHHHHH
Q 011057 127 SEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-------GYY--VMDPVKAVE 197 (494)
Q Consensus 127 t~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-------~~~--~~d~~~L~~ 197 (494)
++|+.+++.++.++ ++ |+++.+.+.++...+.+.|++++.+++++ +.+ .+|+++|++
T Consensus 103 t~A~~~~~~all~p-------------GD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~ 168 (460)
T PRK13238 103 RAAEQILFPVLIKK-------------GD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEA 168 (460)
T ss_pred HHHHHHHHHHhCCC-------------CC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHH
Confidence 99999887776331 24 88888877777777889999999999863 123 499999999
Q ss_pred hhhh----CCeEEEEeeCCCCcc-cc---cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCC---cc-ccccc-
Q 011057 198 MVDE----NTICVAAILGSTLNG-EF---EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYP---EL-EWDFR- 264 (494)
Q Consensus 198 ~i~~----~t~~vv~~~~~~~tG-~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~---~~-~~~~~- 264 (494)
+|++ +|++|++++++|++| .+ +++++|.++|++| |+++++|+|+.....-|... .. ...+.
T Consensus 169 ~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~------gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~ 242 (460)
T PRK13238 169 LIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKY------GIPVVIDAARFAENAYFIKQREPGYKDKSIKE 242 (460)
T ss_pred HHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEECcchhhhhhhhhhccccccCCCHHH
Confidence 9984 689999999999998 44 5578999999999 99999999884311101110 00 00100
Q ss_pred -----CCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHH-hcHh
Q 011057 265 -----LPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIR-LGFE 338 (494)
Q Consensus 265 -----~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~-l~~~ 338 (494)
....|++++++||.+++|.| |++++++.............+-+ +...+..+.....++..+++. +.++
T Consensus 243 i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~~~~~~~~~~g-----~~t~~g~~~~~~~Ala~~l~e~~~~~ 316 (460)
T PRK13238 243 IAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFTECRTLCILYEG-----FPTYGGLAGRDMEALAVGLYEGMDED 316 (460)
T ss_pred HhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHHHHhhhcccccCC-----cccccCcHHHHHHHHHhhHHHhhChH
Confidence 13589999999999998876 77776653332111111000001 111122222223334444432 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCC------CCCCHHHHHHHHH-hcCceeec---cccC
Q 011057 339 GYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDN------KRHDEFEVAELLR-RFGWIVPA---YTMP 408 (494)
Q Consensus 339 g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~------~~~~~~~l~~~L~-~~Gi~v~~---~~~~ 408 (494)
..+...+.+++|.+.|++.| +.+..+. ....+...+..- .+....+++..|. +.|+.+.. +..+
T Consensus 317 ----~~~~~~~~~~~l~~~L~~~G-~~~~~p~-Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~ 390 (460)
T PRK13238 317 ----YLAYRIGQVEYLGEGLEEAG-VPIQTPA-GGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLG 390 (460)
T ss_pred ----HHHHHHHHHHHHHHHHHHCC-CCeEccC-CceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecc
Confidence 23333446789999999985 8888654 333344444210 1234566777665 66776522 1122
Q ss_pred CCC-C------CceEEEEEecc-CCChHHHHHHHHHHHHHHHHHh
Q 011057 409 ADA-Q------HITVLRVVIRE-DFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 409 ~~~-~------~~~~lRvs~~~-~~t~~~id~~i~~l~~~~~~l~ 445 (494)
... . ....+|+++.- -.|.+.+|...+.|+.+.++-.
T Consensus 391 ~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~~ 435 (460)
T PRK13238 391 RDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKENRE 435 (460)
T ss_pred cCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHhHh
Confidence 211 1 14789999853 3466777666666655554333
No 169
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.89 E-value=4.8e-20 Score=200.60 Aligned_cols=351 Identities=14% Similarity=0.082 Sum_probs=229.4
Q ss_pred CCCCCCCCHHHHHHHHHHhhhhcCCCCCcccc-cccCCChHHHHHHHHHH---hcc-cCCCCCCChhhHHHHHHHHHHHH
Q 011057 31 TMPENSIPKEAAYQIINDELMLDGNPRLNLAS-FVTTWMEPECDKLMMAA---INK-NYVDMDEYPVTTELQNRCVNIIA 105 (494)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~---~~~-~~~~~~~~~~~~~le~~~~~~la 105 (494)
.+| .+.++.+++++++++...+.......+. |.+++.++.+.+.+.+. +.. .+..++.++|..+...+.+.+++
T Consensus 53 ~lp-~~~sE~e~~~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la 131 (954)
T PRK05367 53 DLP-AALSEAEALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVA 131 (954)
T ss_pred CCC-CCCCHHHHHHHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHH
Confidence 444 3578999999999887655322111222 33333344453444321 111 23334456788888889999999
Q ss_pred HHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH----HHHHcCCeeEEE
Q 011057 106 RLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK----FARYFEVELKEV 181 (494)
Q Consensus 106 ~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~----~~~~~G~~v~~v 181 (494)
+|+|++. ....+..++|.+....+.+.+.. + +. .++|++++..|++... .++..|++++.+
T Consensus 132 ~LtG~~~-----anaSl~d~aTAa~ea~~~a~~~~--~-----~~---~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~ 196 (954)
T PRK05367 132 DLTGLEI-----ANASLLDEATAAAEAMALAKRVS--K-----SK---SNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVG 196 (954)
T ss_pred HHHCCCh-----hhccccccHHHHHHHHHHhhhhc--c-----CC---CCEEEEcCccCHHHHHHHHHHHHhCCCEEEEe
Confidence 9999986 34667777777776444333211 0 00 2589999999987654 456789999999
Q ss_pred eccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc
Q 011057 182 KLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW 261 (494)
Q Consensus 182 ~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (494)
+.+++ ++ ++++..+++.. .+.+|.+.|+++|+++||++ |++++||+.+....+ ..+
T Consensus 197 ~~~~d---~~--------~~~~~~vlvq~-p~~~G~i~d~~~i~~~ah~~------Gal~~vda~~~Al~~--l~~---- 252 (954)
T PRK05367 197 DAAKA---LD--------HDDVFGVLLQY-PGTSGEVRDYTALIAAAHAR------GALVAVAADLLALTL--LTP---- 252 (954)
T ss_pred cCccC---CC--------cccEEEEEEec-CCCCeeeccHHHHHHHHHHc------CCEEEEEehhhhccC--CCC----
Confidence 87542 11 23455554444 56779999999999999999 999999997633221 111
Q ss_pred cccCCCceEEEEcCcccC----CcCCceEEEEEeCCCCccccccc-ccCCC----CCC------C-----CCcccccCcc
Q 011057 262 DFRLPLVKSINVSGHKYG----LVYAGIGWVIWRNKEDLPEELIF-HINYL----GAD------Q-----PTFTLNFSKG 321 (494)
Q Consensus 262 ~~~~~~~D~~~~~~hK~l----~~p~g~G~~~~~~~~~~~~~~~~-~~~y~----~~~------~-----~~~~~~~s~~ 321 (494)
.+..++|+++.++|||+ ++++++|++++++.. . +.++. ...|. +.. + ..+. .++.+
T Consensus 253 -pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~-~-r~lpgrivG~s~d~~g~~~~~lalqtReqhiRre-kaTsN 328 (954)
T PRK05367 253 -PGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAY-K-RSMPGRIVGVSVDAAGNPALRLALQTREQHIRRE-KATSN 328 (954)
T ss_pred -hhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHH-H-hhCCCCeeeeecccCCCccccccccccccccccc-ccccc
Confidence 12348999999999994 233369999998742 1 11111 11111 100 0 0011 12222
Q ss_pred hHHH---HHHH--HHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHH
Q 011057 322 SSQV---IAQY--YQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLR 396 (494)
Q Consensus 322 ~~~~---~a~~--~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (494)
.... ++.. .++.++|.+|++++.++.+.+++|+.++|++.+ +++..+. .+..+.+++. .+..++.++|.
T Consensus 329 ict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G-~~~~~~~-~f~~~~~~~~----~~~~~i~~~l~ 402 (954)
T PRK05367 329 ICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALG-LEVVHDS-FFDTLTVEVG----GDAAAVLARAL 402 (954)
T ss_pred cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC-cccCCCC-CCCeEEEeCC----CCHHHHHHHHH
Confidence 2221 2222 234778999999999999999999999998854 8877654 5677777752 26789999999
Q ss_pred hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 397 RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 397 ~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
++||.++.. ....+|+|+++.+|++||++|++.|.
T Consensus 403 ~~gi~~~~~-------~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 403 AAGINLRRV-------DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred HCCceeccc-------cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 999986331 12359999999999999999999886
No 170
>PRK03321 putative aminotransferase; Provisional
Probab=99.88 E-value=7e-21 Score=190.02 Aligned_cols=310 Identities=13% Similarity=0.039 Sum_probs=206.5
Q ss_pred ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA 147 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~ 147 (494)
+++.+.+++.+++.. ...|. .++..+ +++.+++++|.++ ..+++|+|+++++..++.+...
T Consensus 36 ~~~~~~~a~~~~~~~-~~~y~-~~g~~~----lr~~ia~~~~~~~-----~~I~~~~G~~~~l~~~~~~~~~-------- 96 (352)
T PRK03321 36 PLPSVRAAIARAAAG-VNRYP-DMGAVE----LRAALAEHLGVPP-----EHVAVGCGSVALCQQLVQATAG-------- 96 (352)
T ss_pred CCHHHHHHHHHHHHh-cCcCC-CCcHHH----HHHHHHHHhCcCH-----HHEEECCCHHHHHHHHHHHhcC--------
Confidence 456788888776642 22232 234444 5566888888764 3588899999888766654422
Q ss_pred cCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHH
Q 011057 148 EGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDL 227 (494)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~l 227 (494)
.++.|+++.+.+..+...++..|++++.++++++ +.+|++++++++++++++|++++++||||.+.|.++|.++
T Consensus 97 -----~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l 170 (352)
T PRK03321 97 -----PGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD-HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARF 170 (352)
T ss_pred -----CCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC-CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHH
Confidence 1258999988888888888999999999998754 6799999999998889999999999999999999999999
Q ss_pred HHHhhcccCCCceEEEecccccccccccCCc-cccc-cc-CCCceEEEEcCcccCC-cCCceEEEEEeCCCCcccccccc
Q 011057 228 LAEKNKETGWDTPIHVDAASGGFIAPFLYPE-LEWD-FR-LPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIFH 303 (494)
Q Consensus 228 a~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~~-~~-~~~~D~~~~~~hK~l~-~p~g~G~~~~~~~~~~~~~~~~~ 303 (494)
|+.+.. ++++++|++|+.+.. .... .... +. .+. -.+..++.|.++ ++.++|+++... ..+ +.+...
T Consensus 171 ~~~~~~----~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~-vi~~~S~SK~~g~~GlRiG~~v~~~-~~~-~~~~~~ 241 (352)
T PRK03321 171 LDAVPA----DVLVVLDEAYVEYVR--DDDVPDGLELVRDHPN-VVVLRTFSKAYGLAGLRVGYAVGHP-EVI-AALRKV 241 (352)
T ss_pred HHhCCC----CeEEEEechHHHhcc--CcCCCcHHHHHhhCCC-EEEEecchHHhhhHHHhhhhhcCCH-HHH-HHHHHh
Confidence 987311 899999999987542 1100 0000 11 112 234447788874 667789988642 222 221111
Q ss_pred cCCCCCCCCCcccccCcchHHHHHHHHHHHHh-cHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecC
Q 011057 304 INYLGADQPTFTLNFSKGSSQVIAQYYQLIRL-GFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKD 382 (494)
Q Consensus 304 ~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l-~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~ 382 (494)
.. . .+ .+.+++.+++..+ ..+.+.+..++..+.++++.+.|++.+ +.+.. + ..+++.+.+.
T Consensus 242 --~~-----~----~~---~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~~-~~~~~-~-~g~~i~i~l~- 303 (352)
T PRK03321 242 --AV-----P----FS---VNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAAG-WTVPP-S-QANFVWLPLG- 303 (352)
T ss_pred --cC-----C----CC---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCC-C-CCCEEEEeCC-
Confidence 00 0 11 1223344444333 233445555666666778999998875 65432 2 4566666652
Q ss_pred CCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 383 NKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 383 ~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
.+..++.+.|.++|+.+..+ +...+|++++ +.+++++|+++|+++++
T Consensus 304 ---~~~~~~~~~l~~~gI~v~~~-------~~~~iRi~~~---~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 304 ---ERTADFAAAAAEAGVVVRPF-------AGEGVRVTIG---APEENDAFLRAARAWRA 350 (352)
T ss_pred ---CCHHHHHHHHHHCCEEEEcc-------CCCcEEEeeC---CHHHHHHHHHHHHHHhc
Confidence 25678999999999987542 1235999986 77899999999988654
No 171
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.88 E-value=1.6e-20 Score=185.66 Aligned_cols=282 Identities=13% Similarity=0.064 Sum_probs=190.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCe
Q 011057 98 NRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVE 177 (494)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~ 177 (494)
.++++.+++++|.++ ..+++|+|+++++.+++... . ...|++..+++..+...++..|++
T Consensus 43 ~~lr~~ia~~~~~~~-----~~I~it~Gs~~~l~~~~~~~-~--------------~~~vv~~~P~y~~y~~~~~~~G~~ 102 (332)
T PRK06425 43 TDIEDQIKIYTQGLK-----IKVLIGPGLTHFIYRLLSYI-N--------------VGNIIIVEPNFNEYKGYAFTHGIR 102 (332)
T ss_pred HHHHHHHHHHhCCCc-----ceEEECCCHHHHHHHHHHHh-C--------------CCcEEEeCCChHHHHHHHHHcCCe
Confidence 346677999999986 45999999999998776532 1 125777789999999999999999
Q ss_pred eEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 178 LKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 178 v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
++.+|+++ ..+|.+.+++ .++++|++++|+||||.+.+ +++|.++|+++ ++++++|++|+.+....
T Consensus 103 v~~vp~~~--~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~DE~Y~~~~~~~ 171 (332)
T PRK06425 103 ISALPFNL--INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKK------GALLFIDEAFIDFVPNR 171 (332)
T ss_pred EEEEeCCc--ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHc------CCEEEEecchhcccccc
Confidence 99999875 3456666553 37889999999999999866 56677778889 99999999998764210
Q ss_pred cCCccccccc-CCCceEEEEcCcccCC-cCCceEEEEEeCCCCccccccc-ccCCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 255 LYPELEWDFR-LPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIF-HINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 255 ~~~~~~~~~~-~~~~D~~~~~~hK~l~-~p~g~G~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
.+....... .++ -++..++.|.+. ++.++||++..+. .+ +.+.. ...| . ....++ .+
T Consensus 172 -~~~~~~~~~~~~~-vi~~~SfSK~~~l~GlRiGy~v~~~~-li-~~l~~~~~~~--------~-------~~~~~~-~~ 231 (332)
T PRK06425 172 -AEEDVLLNRSYGN-VIIGRSLTKILGIPSLRIGYIATDDY-NM-KISRKITEPW--------S-------VCDPAI-DF 231 (332)
T ss_pred -chhHHHHhccCCC-EEEEeecHHhcCCchhhheeeecCHH-HH-HHHHHcCCCC--------c-------cCHHHH-HH
Confidence 000000011 122 234456778665 8889999986432 22 22111 1111 0 011111 12
Q ss_pred HHHhcHhH-HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCC
Q 011057 332 LIRLGFEG-YRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPAD 410 (494)
Q Consensus 332 l~~l~~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~ 410 (494)
+.....+. +++..+...+.++++.+.|++++ +++..++ ..+++.+.++ +..++.++|.++|+.+.......
T Consensus 232 l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~-~g~f~~~~~~-----~~~~~~~~l~~~gi~v~~~~~f~- 303 (332)
T PRK06425 232 IRSIDLDYVAKHSLDIMENERSYLINNLEAMG-FRAAGDP-SANFITFMIP-----DAHDFYSYLLKNGILVRLLDDYE- 303 (332)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCC-CceEEEEEcC-----CHHHHHHHHHHCCeEEEECCCCC-
Confidence 22222222 34567777888899999999985 7765444 5677777763 46789999999999886543221
Q ss_pred CCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 411 AQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 411 ~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
..+..++|++++ +.+++++|+++|++++
T Consensus 304 ~~~~~~iRis~~---~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 304 CLGEQYIRIAIR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred CCCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 123468999998 6789999999998765
No 172
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.88 E-value=1.8e-20 Score=187.91 Aligned_cols=308 Identities=19% Similarity=0.157 Sum_probs=204.2
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCc-ceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCC
Q 011057 84 YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETA-VGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGAN 162 (494)
Q Consensus 84 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~-~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~ 162 (494)
...|..+.+..++++.+.+++.+-.|.+.+ .. .+++++|+.+++..+....... .++.|+++.+
T Consensus 37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~---~~~~i~~~~G~~~~~~~~~~~~~~~------------~~~~vlv~~P 101 (363)
T PF00155_consen 37 FLGYPPPQGYPELREAIADFLGRRYGVPVD---PEANILVTSGAQAALFLLLRLLKIN------------PGDTVLVPDP 101 (363)
T ss_dssp CTSSTCTTHHHHHHHHHHHHHHHHHTHHTT---GGEGEEEESHHHHHHHHHHHHHHSS------------TTSEEEEEES
T ss_pred cccCCCchhhHHHHHHHHHHhhhccCcccc---cceEEEEecccccchhhhhhccccc------------ccccceecCC
Confidence 445666668888888877777655555442 13 4666666555555444444210 1257999999
Q ss_pred cchHHHHHHHHcCCeeEEEecc-CCccccCHHHHHHhhhh------CCeEEEEeeCCCCcccccCHHH---HHHHHHHhh
Q 011057 163 VQVCWEKFARYFEVELKEVKLS-EGYYVMDPVKAVEMVDE------NTICVAAILGSTLNGEFEDVKL---LNDLLAEKN 232 (494)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~------~t~~vv~~~~~~~tG~~~~l~~---I~~la~~~~ 232 (494)
.|..+...++..|++++.++++ ++++.+|+++|++.+++ ++++|+++.++||||...+.++ |+++|+++
T Consensus 102 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~- 180 (363)
T PF00155_consen 102 CYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREY- 180 (363)
T ss_dssp SSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHT-
T ss_pred ccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhccc-
Confidence 9999999999999999999975 34579999999999987 5678999999999999866555 55559999
Q ss_pred cccCCCceEEEecccccccccccCCcc---cccccCCCceEEEEcCcccC-CcCCceEEEEEeCCCCccccccc-ccCCC
Q 011057 233 KETGWDTPIHVDAASGGFIAPFLYPEL---EWDFRLPLVKSINVSGHKYG-LVYAGIGWVIWRNKEDLPEELIF-HINYL 307 (494)
Q Consensus 233 ~~~~~~~~l~vD~a~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~hK~l-~~p~g~G~~~~~~~~~~~~~~~~-~~~y~ 307 (494)
++++++|++|+.+... .+.. ...+....-.++..++.|.+ +++.++|++++.. ... ..+.. ...+.
T Consensus 181 -----~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~-~~~-~~l~~~~~~~~ 251 (363)
T PF00155_consen 181 -----NIIIIVDEAYSDLIFG--DPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP-ELI-ERLRRFQRSGL 251 (363)
T ss_dssp -----TSEEEEEETTTTGBSS--SSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH-HHH-HHHHHHHHHTT
T ss_pred -----ccceeeeeceeccccC--CCccCcccccccccccceeeeeccccccccccccccccchh-hhh-hhhhhcccccc
Confidence 9999999999986531 1111 11111111246777888965 5667899999843 222 22111 11111
Q ss_pred CCCCCCcccccCcchHHHHHHHHHHHHhc--HhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCC
Q 011057 308 GADQPTFTLNFSKGSSQVIAQYYQLIRLG--FEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKR 385 (494)
Q Consensus 308 ~~~~~~~~~~~s~~~~~~~a~~~al~~l~--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~ 385 (494)
. +......+...+..-+ .+.+++..+++.++++++.+.|++. ++.+..++ .++++|.....
T Consensus 252 ----------~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~--~~~~~~~~~~~-- 314 (363)
T PF00155_consen 252 ----------S--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPE--AGFFLWVRLDP-- 314 (363)
T ss_dssp ----------S--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS--BSSEEEEEESH--
T ss_pred ----------c--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeecc--CccEEEEEccc--
Confidence 1 1112212222222222 1255778888889999999999998 48888764 46666553221
Q ss_pred CCHHHHHHHHHhc-CceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHH
Q 011057 386 HDEFEVAELLRRF-GWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 386 ~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
.+..++.++|.++ |+.+.....+.. ..++|+++ ...++++++++++.|
T Consensus 315 ~~~~~l~~~L~~~~gi~v~pg~~~~~---~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 315 NDAEELAQELLEEYGILVRPGSYFGV---PGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp HHHHHHHHHHHHHHTEEEEEGGGGTS---TTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhCCEEEEecCCCCC---CCEEEEEe-ccCCHHHHHHHHhhC
Confidence 1467899999998 999876555543 55799999 677898888877654
No 173
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=3.9e-20 Score=185.08 Aligned_cols=291 Identities=17% Similarity=0.098 Sum_probs=198.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCe
Q 011057 98 NRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVE 177 (494)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~ 177 (494)
.++++.+++++|.++ ..+++|+|+++++.+++.++... +++.|+++.+++..+...++..|++
T Consensus 62 ~~lr~~ia~~~~~~~-----~~I~~t~G~~~~l~~~~~~~~~~------------g~~~vlv~~p~y~~~~~~~~~~g~~ 124 (364)
T PRK04781 62 PGLRSALAALYGCAP-----EQLLIGRGSDEAIDLLVRALCVP------------GRDAVLVTPPVFGMYAVCARLQNAP 124 (364)
T ss_pred HHHHHHHHHHhCcCh-----HHEEEeCCHHHHHHHHHHHhcCC------------CCCeEEEcCCChHHHHHHHHHcCCE
Confidence 356677888889875 45899999999998887766321 1247889999988888888999999
Q ss_pred eEEEeccC--CccccCHHHHHHh-hhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 178 LKEVKLSE--GYYVMDPVKAVEM-VDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 178 v~~v~~~~--~~~~~d~~~L~~~-i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
++.+++++ +++.+|++++++. ..+++++|++++++||||.+.+.+++.++++...+ ++++++|++|+.+..
T Consensus 125 ~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~----~~~iI~Deay~~f~~-- 198 (364)
T PRK04781 125 LVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQG----KALVVVDEAYGEFSD-- 198 (364)
T ss_pred EEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCC----CcEEEEeCcchhhcC--
Confidence 99999842 3357899998654 46688999999999999999999999999886421 789999999987642
Q ss_pred cCCcccccc-cCCCceEEEEcCcccC-CcCCceEEEEEeCCCCccccccc-ccCCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 255 LYPELEWDF-RLPLVKSINVSGHKYG-LVYAGIGWVIWRNKEDLPEELIF-HINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 255 ~~~~~~~~~-~~~~~D~~~~~~hK~l-~~p~g~G~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
.+...... ..+++ ++..++.|.+ +++.++||++... +.+ ..+.. ...| + .+.+++.++
T Consensus 199 -~~~~~~~~~~~~~v-i~~~SfSK~~gl~GlRvGy~v~~~-~l~-~~l~~~~~~~-----------~----~~~~~~~~a 259 (364)
T PRK04781 199 -VPSAVGLLARYDNL-AVLRTLSKAHALAAARIGSLIANA-ELI-AVLRRCQAPY-----------P----VPTPCAALA 259 (364)
T ss_pred -CcchHHHHhhCCCE-EEEecChhhcccccceeeeeeCCH-HHH-HHHHhccCCC-----------C----CCHHHHHHH
Confidence 11100001 11233 4456788876 4889999988543 222 21111 1111 0 112223344
Q ss_pred HHHhcH---hHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccC
Q 011057 332 LIRLGF---EGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMP 408 (494)
Q Consensus 332 l~~l~~---~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~ 408 (494)
+..+.. +...+..+...+.++++.+.|++++++....++ ..+++.++++ +..++.+.|.++||.+......
T Consensus 260 ~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~-~g~f~~~~~~-----~~~~~~~~l~~~gI~v~~~~~~ 333 (364)
T PRK04781 260 EQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPS-QGNFLLVRFD-----DAEAAFQALLAAGVVVRDQRAA 333 (364)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCC-CCcEEEEEcC-----CHHHHHHHHHHCCeEEeeCCCC
Confidence 444422 234455566778888999999998766533343 4677777763 3568999999999998654321
Q ss_pred CCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 409 ADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 409 ~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
. ....++|++++ +.+++++|+++|+++.
T Consensus 334 ~--~~~~~~Ris~~---~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 334 P--RLSDALRITLG---TPEQNDRVLAALQRTQ 361 (364)
T ss_pred C--CCCCeEEEeCC---CHHHHHHHHHHHHHHH
Confidence 1 12457999998 6788999998888754
No 174
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.88 E-value=1.5e-19 Score=183.62 Aligned_cols=350 Identities=13% Similarity=0.039 Sum_probs=218.0
Q ss_pred CCCCCcccccccCCC-hHHHHHHHHHHhcc-cCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCc-ceeeecChhHHH
Q 011057 54 GNPRLNLASFVTTWM-EPECDKLMMAAINK-NYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETA-VGVGTVGSSEAI 130 (494)
Q Consensus 54 ~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~-~~~~t~ggt~a~ 130 (494)
+...++|+.+.+... ++.+.+.+...+.. ....|....+...+++.+.+|+.+.+|.+.+ .. .+++|+|+++++
T Consensus 32 ~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~---~~~~I~it~G~~~al 108 (403)
T PRK08636 32 GEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLD---PETEVVATMGSKEGY 108 (403)
T ss_pred CCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCC---CCCeEEECCChHHHH
Confidence 333455555444432 34455555554433 2345666678889999999999988887542 12 488999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEecc-CCccccCHHHH----HHhhh---hC
Q 011057 131 MLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS-EGYYVMDPVKA----VEMVD---EN 202 (494)
Q Consensus 131 ~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L----~~~i~---~~ 202 (494)
.+++.++... ++.|++++++|+.+...++..|++++.++++ ++++.+|++.+ ++++. .+
T Consensus 109 ~~~~~~l~~~-------------gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 175 (403)
T PRK08636 109 VHLVQAITNP-------------GDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPK 175 (403)
T ss_pred HHHHHHhCCC-------------CCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCC
Confidence 9888877431 3689999999999999999999999999885 33468998754 55554 36
Q ss_pred CeEEEEeeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEeccccccccc-ccCCcccccc-cCCCceEEEEcCcc
Q 011057 203 TICVAAILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAP-FLYPELEWDF-RLPLVKSINVSGHK 277 (494)
Q Consensus 203 t~~vv~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~-~~~~~~~~~~-~~~~~D~~~~~~hK 277 (494)
+++|++++|+||||.+.+ +++|.++|+++ ++++++|++|+.+... ...+... .+ ......+...++.|
T Consensus 176 ~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~------~~~II~De~Y~~l~~~~~~~~~~~-~~~~~~~~~i~~~S~SK 248 (403)
T PRK08636 176 PKYVVVNFPHNPTTATVEKSFYERLVALAKKE------RFYIISDIAYADITFDGYKTPSIL-EVEGAKDVAVESYTLSK 248 (403)
T ss_pred ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc------CcEEEEeccchhhccCCCCCCChh-cCCCccccEEEEEeccc
Confidence 788999999999999965 56788889999 9999999999875321 0001000 11 11123344567889
Q ss_pred cC-CcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHH
Q 011057 278 YG-LVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKE 356 (494)
Q Consensus 278 ~l-~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~ 356 (494)
.+ .++.++||++..+ ..+ ..+.....+... +.......++. .++. -....+++..+.+.++++.+.+
T Consensus 249 ~~~~~GlRiG~iv~~~-~li-~~~~~~~~~~~~--------~~~~~~q~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~ 316 (403)
T PRK08636 249 SYNMAGWRVGFVVGNK-KLV-GALKKIKSWLDY--------GMFTPIQVAAT-IALD-GDQSCVEEIRETYRKRRDVLIE 316 (403)
T ss_pred ccCCccceeeeeeCCH-HHH-HHHHHHHHHhcc--------cCChHHHHHHH-HHHh-CcHHHHHHHHHHHHHHHHHHHH
Confidence 88 6889999987533 222 211111111100 11111122111 1221 1234455666777788889999
Q ss_pred HHhhCCCeEEeecCCCccEEEEEecCC-CCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHH
Q 011057 357 GLEKTGRFNIVSKDEGVPLVAFSLKDN-KRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLV 434 (494)
Q Consensus 357 ~L~~~~~~~~~~~~~~~~~v~f~~~~~-~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i 434 (494)
.|++.+ +.+..+. ...++.+++++. ...+..++++.|. +.|+.+....... ..+..++|+++. ...++++..+
T Consensus 317 ~L~~~~-~~~~~p~-~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~-~~~~~~iRi~~~--~~~~~l~~~~ 391 (403)
T PRK08636 317 SFANAG-WELQKPR-ASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFG-EYGDEYVRIALI--ENENRIRQAA 391 (403)
T ss_pred HHHHCC-CcccCCC-cceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhC-cCCCCeEEEEec--CCHHHHHHHH
Confidence 999875 6654432 445666666432 1234678887754 6898875432211 123468999996 3556666555
Q ss_pred HHHHHHHHH
Q 011057 435 LDITKVLHE 443 (494)
Q Consensus 435 ~~l~~~~~~ 443 (494)
+.|+++++.
T Consensus 392 ~rl~~~l~~ 400 (403)
T PRK08636 392 RNIKKFLKE 400 (403)
T ss_pred HHHHHHHHh
Confidence 555555443
No 175
>PLN02231 alanine transaminase
Probab=99.88 E-value=2.3e-19 Score=186.23 Aligned_cols=346 Identities=11% Similarity=0.035 Sum_probs=216.8
Q ss_pred CcccccccCCChHHHHHHHHHHhccc----CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHH
Q 011057 58 LNLASFVTTWMEPECDKLMMAAINKN----YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLA 133 (494)
Q Consensus 58 ~~~~~~~~~~~~p~~~~~~~~~~~~~----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a 133 (494)
+++.......+...+.. ..+.+... ...|+.+.|..++++.+.+++.+..|.+.+ ...+++|+|+++|+.++
T Consensus 132 i~~~~~~~~fp~~~i~~-a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~---pe~I~iT~Ga~~ai~~~ 207 (534)
T PLN02231 132 LDKSETHGLFSADAIER-AWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPAD---PNDIFLTDGASPAVHMM 207 (534)
T ss_pred CCCCCccccCCHHHHHH-HHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCC---cccEEEeCCHHHHHHHH
Confidence 44443333344433333 33455431 344777789999999999999887787653 24599999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhh------CCeEE
Q 011057 134 GLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDE------NTICV 206 (494)
Q Consensus 134 ~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~------~t~~v 206 (494)
+.++... .++.|+++.+.|..+...++..|++++.+++++ ++|.+|+++|++++++ ++++|
T Consensus 208 ~~~l~~~------------~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~i 275 (534)
T PLN02231 208 MQLLIRS------------EKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRAL 275 (534)
T ss_pred HHHhccC------------CCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEE
Confidence 8877421 126899999999999999999999999999975 3478999999999875 57889
Q ss_pred EEeeCCCCccccc---CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcc-c-ccc----cC--CCceEEE-Ec
Q 011057 207 AAILGSTLNGEFE---DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPEL-E-WDF----RL--PLVKSIN-VS 274 (494)
Q Consensus 207 v~~~~~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~----~~--~~~D~~~-~~ 274 (494)
++++|+||||.+. .+++|.++|+++ ++++++|++|...... ..... . ..+ +. .....++ .+
T Consensus 276 vl~nP~NPTG~vls~e~l~~Iv~~a~~~------~l~lI~DEvY~~l~y~-~~~~~~s~~~~~~~~g~~~~~~~vi~l~S 348 (534)
T PLN02231 276 VVINPGNPTGQVLAEENQRDIVEFCKQE------GLVLLADEVYQENVYV-PDKKFHSFKKVARSMGYGEKDISLVSFQS 348 (534)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEEccchhcccC-CCCCcccHHHHHhhhccccCCceEEEEec
Confidence 9999999999995 467889999999 9999999999875421 00000 0 000 00 1122333 37
Q ss_pred CcccC--CcCCceEEEEEe--CCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc-----HhHHH----
Q 011057 275 GHKYG--LVYAGIGWVIWR--NKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-----FEGYR---- 341 (494)
Q Consensus 275 ~hK~l--~~p~g~G~~~~~--~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~-----~~g~~---- 341 (494)
..|.+ .++.++||+++. ++... ..+..... . .. ++ ....+.++..++. +..+.
T Consensus 349 ~SK~~~g~pGlRiGy~~~~~~~~~l~-~~l~k~~~-~-------~~-~s----~~~~Q~~~~~~l~~p~~~~~~y~~~~~ 414 (534)
T PLN02231 349 VSKGYYGECGKRGGYMEVTGFTSDVR-EQIYKVAS-V-------NL-CS----NISGQILASLVMSPPKPGDESYESYMA 414 (534)
T ss_pred cCcccccCCccceEEEEEecCCHHHH-HHHHHHHh-h-------hc-CC----ChHHHHHHHHHhCCCCCCcchHHHHHH
Confidence 78943 578999999763 22222 21111100 0 00 11 1223333333331 12222
Q ss_pred ---HHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEE-EecCC-CC---------CCHHHHHHHHH-hcCceeeccc
Q 011057 342 ---NVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAF-SLKDN-KR---------HDEFEVAELLR-RFGWIVPAYT 406 (494)
Q Consensus 342 ---~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f-~~~~~-~~---------~~~~~l~~~L~-~~Gi~v~~~~ 406 (494)
++.+.+.++++++.+.|++++++++..+ ..+++.| ++.-+ .. .+...++.+|. +.|+.+....
T Consensus 415 ~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p--~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs 492 (534)
T PLN02231 415 EKDGILSSLARRAKTLEDALNSLEGVTCNKA--EGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGS 492 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceecCC--CeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCc
Confidence 3356677888899999999877876544 4567776 33211 00 11223556555 6799875433
Q ss_pred cCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 407 MPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 407 ~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
......+...+|+++. .+.++++..++.|.++++.+
T Consensus 493 ~Fg~~~g~~~~Rit~~--~~~e~l~eal~RL~~~~~~~ 528 (534)
T PLN02231 493 GFGQVPGTWHFRCTIL--PQEDKIPAIVSRLTEFHKSF 528 (534)
T ss_pred ccCCCCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHHH
Confidence 2222234557999985 35666666666665555443
No 176
>PRK05968 hypothetical protein; Provisional
Probab=99.87 E-value=2.9e-20 Score=186.87 Aligned_cols=285 Identities=19% Similarity=0.147 Sum_probs=195.2
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchH----HHHHHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVC----WEKFARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~ 174 (494)
++++.+++++|.+. .+++++|+.|+.+++.+... . +++|+++...|.. +...+...
T Consensus 67 ~le~~lA~l~g~~~-------av~~~sG~~Ai~~al~al~~--------~-----Gd~Vl~~~~~y~~t~~~~~~~~~~~ 126 (389)
T PRK05968 67 AFEEMLAKLEGAED-------ARGFASGMAAISSTVLSFVE--------P-----GDRIVAVRHVYPDAFRLFETILKRM 126 (389)
T ss_pred HHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhC--------C-----CCEEEEeCCCchHHHHHHHHHHHHc
Confidence 45566999999975 56778888898877765522 1 2688888888764 34566778
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++. .|++++++++ ++|++|++.+++++++.+.|+++|+++|+++ ++++++|++|+.+..
T Consensus 127 G~~v~~vd~------~d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~------gi~vivD~a~a~~~~-- 191 (389)
T PRK05968 127 GVEVDYVDG------RDEEAVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRH------GVVTMIDNSWASPVF-- 191 (389)
T ss_pred CceEEEeCC------CCHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEECCCcchhc--
Confidence 999888863 2788999888 5789999999999999999999999999999 999999999976532
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
..+ . . .++|++..+++|++.+|.+ .|+++ .++..+.........+++. .. ....+|..+
T Consensus 192 ~~p-~--~---~g~Divv~S~tK~l~g~~~~~gG~i~-~~~~~~~~l~~~~~~~~g~---------~~---~~~~A~~~l 252 (389)
T PRK05968 192 QRP-I--T---LGVDLVIHSASKYLGGHSDTVAGVVA-GSKEHIARINAEAYPYLGA---------KL---SPFEAWLLL 252 (389)
T ss_pred cCc-h--h---cCCcEEEeeccccccCCCCeEEEEEE-ECHHHHHHHHHHHHHhCCC---------CC---ChHHHHHHH
Confidence 111 1 1 2689999999999988755 46555 4443322111111122221 11 112233333
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC-----------CCccEEEEEecCCCCCCHHHHHHHHHhcCce
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKD-----------EGVPLVAFSLKDNKRHDEFEVAELLRRFGWI 401 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~ 401 (494)
+.+ +.+..++++..+++.++.+.|+++++++.+..+ ...++++|.+++ +.+..++.++|...++.
T Consensus 253 ~~L--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~--~~~~~~f~~~L~~~~~~ 328 (389)
T PRK05968 253 RGL--RTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE--GIDVRAFADALKLFRLG 328 (389)
T ss_pred ccc--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC--HHHHHHHHHhCCccEEe
Confidence 333 345778888899999999999999988655432 124599999863 34567888888776644
Q ss_pred ee-----ccccCCC-------------CCC--ceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 402 VP-----AYTMPAD-------------AQH--ITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 402 v~-----~~~~~~~-------------~~~--~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
++ +...|.. ..| ...+|+|++. |+.+.++++|+++++...
T Consensus 329 ~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGl----E~~~dl~~dl~~al~~~~ 388 (389)
T PRK05968 329 VSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGL----EGTEALWADLEQALAAAS 388 (389)
T ss_pred cCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHHhh
Confidence 32 1111110 111 3689999985 677888999999887543
No 177
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=6.8e-20 Score=181.09 Aligned_cols=305 Identities=16% Similarity=0.128 Sum_probs=200.9
Q ss_pred CcccccccC-CChHHHHHHHHHHhcccCCC-CCCChhhHHHHHHHHHHHHHHhC---CCCCCCCCcceeeecChhHHHHH
Q 011057 58 LNLASFVTT-WMEPECDKLMMAAINKNYVD-MDEYPVTTELQNRCVNIIARLFN---APLEDSETAVGVGTVGSSEAIML 132 (494)
Q Consensus 58 ~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~le~~~~~~la~l~g---~~~~~~~~~~~~~t~ggt~a~~~ 132 (494)
++|..+.++ ++++.+.+++.+++.....+ |. .++..+++ +.++++++ .++ ..+++|+|+++++.+
T Consensus 22 i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~-~~~~~~Lr----~aia~~~~~~~~~~-----~~i~it~Ga~~~i~~ 91 (335)
T PRK14808 22 TYLALNENPFPFPEDLVDEVFRRLNSDTLRIYY-DSPDEELI----EKILSYLDTDFLSK-----NNVSVGNGADEIIYV 91 (335)
T ss_pred eEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCC-CCChHHHH----HHHHHHhCCCCCCc-----ceEEEcCCHHHHHHH
Confidence 444444333 34567888887776542222 21 23445554 44666665 544 458999999999998
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCC
Q 011057 133 AGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGS 212 (494)
Q Consensus 133 a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~ 212 (494)
++.+. +.|++.+++|..+..+++..|++++.+|++++ +.++... + ..++++++++|+
T Consensus 92 ~~~~~-----------------d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~----~-~~~~~i~i~nP~ 148 (335)
T PRK14808 92 MMLMF-----------------DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD-LRIPEVN----V-GEGDVVFIPNPN 148 (335)
T ss_pred HHHHh-----------------CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc-CCCChhH----c-cCCCEEEEeCCC
Confidence 87765 35889999999999999999999999998764 5555332 2 346889999999
Q ss_pred CCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCC-cCCceEEEEEe
Q 011057 213 TLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYAGIGWVIWR 291 (494)
Q Consensus 213 ~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~G~~~~~ 291 (494)
||||.+.+.+++.+++ ++ ++++++|++|..+......+... ..+.+ ++..++.|.+. ++.++|+++..
T Consensus 149 NPTG~~~s~~~l~~l~-~~------~~~ii~DE~Y~~f~~~~~~~~~~---~~~~v-i~~~S~SK~~~l~GlRvG~~v~~ 217 (335)
T PRK14808 149 NPTGHVFEREEIERIL-KT------GAFVALDEAYYEFHGESYVDLLK---KYENL-AVIRTFSKAFSLAAQRIGYVVSS 217 (335)
T ss_pred CCCCCCcCHHHHHHHH-hc------CCEEEEECchhhhcCCchHHHHH---hCCCE-EEEEechhhccCcccceEEEEeC
Confidence 9999999999999998 57 89999999998752100000000 11233 44456778766 78899999865
Q ss_pred CCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh-cHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC
Q 011057 292 NKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL-GFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKD 370 (494)
Q Consensus 292 ~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l-~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 370 (494)
.+ .+ ..+...... + +. ..+++.++...+ ..+.+.+..+...+.++++.+.|++.+ +++..+
T Consensus 218 ~~-~~-~~l~~~~~~-------~---~~----~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~- 279 (335)
T PRK14808 218 EK-FI-DAYNRVRLP-------F---NV----SYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMG-YRITDS- 279 (335)
T ss_pred HH-HH-HHHHHhcCC-------C---CC----CHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCC-
Confidence 42 22 221111100 0 11 112222222222 223345566667777889999999885 776543
Q ss_pred CCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHH
Q 011057 371 EGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITK 439 (494)
Q Consensus 371 ~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~ 439 (494)
..+++.+.++. .+..++.++|.++|+.|+.+ + .++|++++ +.+++++|++.|++
T Consensus 280 -~g~f~~~~l~~---~~~~~~~~~l~~~Gi~V~~~--~------~~~Risi~---~~~~~~~~~~~l~~ 333 (335)
T PRK14808 280 -RGNFVFIFMEK---EEKERLLEHLRAKNIAVRSF--R------EGVRITIG---KREENDMILKELEV 333 (335)
T ss_pred -CCeEEEEeCCC---ccHHHHHHHHHHCCeEEEEC--C------CCeEEecC---CHHHHHHHHHHHHh
Confidence 46777777643 25578999999999998743 1 35999998 67888888888765
No 178
>PRK10534 L-threonine aldolase; Provisional
Probab=99.87 E-value=1.6e-20 Score=186.01 Aligned_cols=315 Identities=16% Similarity=0.108 Sum_probs=196.3
Q ss_pred cccccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 011057 61 ASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRK 140 (494)
Q Consensus 61 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~ 140 (494)
++...+.++|.+.+++.++.. +...|...+...++++. +++++|.++ .++++||++++.+++.+....
T Consensus 5 ~~~~~~~p~~~~~~a~~~~~~-~~~~Y~~~~~~~~L~~~----la~~~g~~~-------~~v~~~g~~a~~~~l~~~~~~ 72 (333)
T PRK10534 5 RSDTVTRPSRAMLEAMMAAPV-GDDVYGDDPTVNALQDY----AAELSGKEA-------ALFLPTGTQANLVALLSHCER 72 (333)
T ss_pred ccccCCCCCHHHHHHHHhccC-CCcccCCCHHHHHHHHH----HHHHhCCCe-------EEEeCchHHHHHHHHHHhcCC
Confidence 333333467888888766443 23334455566665555 888999975 678999999988887765321
Q ss_pred HHHHHHhcCCCCCCCeEEeCCCcchHHHHH--HHHcC-CeeEEEeccCCccccCHHHHHHhhhh------CCeEEEEeeC
Q 011057 141 WQNKRKAEGKPFDKPNIVTGANVQVCWEKF--ARYFE-VELKEVKLSEGYYVMDPVKAVEMVDE------NTICVAAILG 211 (494)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~--~~~~G-~~v~~v~~~~~~~~~d~~~L~~~i~~------~t~~vv~~~~ 211 (494)
+++|+++.+.|...... +...| ++++.++++++ +.+|+++|++++++ ++++|+++++
T Consensus 73 -------------gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~l~~~i~~~~~~~~~~~lv~l~np 138 (333)
T PRK10534 73 -------------GEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAAD-GTLPLDKVAAKIKPDDIHFARTRLLSLENT 138 (333)
T ss_pred -------------CCeeEEechhhhhHhcCCchHHhcCceEEeecCCCC-CCCCHHHHHHhhcccCcCcccceEEEEecC
Confidence 25788888888543321 34444 67777777654 89999999999976 5788888754
Q ss_pred CCCcccccCHHH---HHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEE
Q 011057 212 STLNGEFEDVKL---LNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV 288 (494)
Q Consensus 212 ~~~tG~~~~l~~---I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~ 288 (494)
+ +|.+.|.++ |+++|+++ ++++++|+||..+.......... .+ ....|.+.++++|.+..+ +|++
T Consensus 139 ~--~G~v~~~~~l~~i~~~~~~~------~~~lvvDEA~~~~~~~~~~~~~~-~~-~~~~~~~~~s~SK~~~~~--~G~~ 206 (333)
T PRK10534 139 H--NGKVLPREYLKQAWEFTRER------NLALHVDGARIFNAVVAYGCELK-EI-TQYCDSFTICLSKGLGTP--VGSL 206 (333)
T ss_pred C--CCeecCHHHHHHHHHHHHHc------CCeEEeeHHHHHHHHHHcCCCHH-HH-HhcCCEEEEEeEcCCCCc--ccce
Confidence 4 699977665 45678888 99999999986321100011111 11 113455566789976544 5654
Q ss_pred EEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEee
Q 011057 289 IWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVS 368 (494)
Q Consensus 289 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (494)
++.+++.+.........+ +.......+.+.+++..+.. ..+.+++..+.++++.++|++++ +++..
T Consensus 207 ~~~~~~~i~~~~~~~~~~-----------~~~~~~~~~~~a~~~~~l~~--~~~~~~~~~~~r~~l~~~L~~~g-~~~~~ 272 (333)
T PRK10534 207 LVGNRDYIKRARRWRKMT-----------GGGMRQAGILAAAGLYALKH--NVARLQEDHDNAAWLAEQLREAG-ADVMR 272 (333)
T ss_pred EEcCHHHHHHHHHHHHHh-----------CCchhhHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhCC-CccCC
Confidence 444554332211111111 00000112233334444422 12444455567789999999985 87654
Q ss_pred cCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 369 KDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 369 ~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
+ ..+++.+++++ .+..++.+.|.++||.++.. ..+|++.+..+|.++++++++.|+.++
T Consensus 273 ~--~~nfv~~~~~~---~~~~~~~~~l~~~gi~v~~~---------~~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 273 Q--DTNMLFVRVGE---EQAAALGEYMRERNVLINAS---------PIVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred C--CceEEEEECCc---hhHHHHHHHHHHcCeeecCC---------ceEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 3 57888888742 24668899999999987432 147888876779999999999888665
No 179
>PLN02271 serine hydroxymethyltransferase
Probab=99.87 E-value=2.4e-19 Score=180.28 Aligned_cols=344 Identities=11% Similarity=0.024 Sum_probs=228.9
Q ss_pred ChHHHHHHHHHHhcccC-CC------CCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 011057 68 MEPECDKLMMAAINKNY-VD------MDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRK 140 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~-~~------~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~ 140 (494)
.+|.+.+++...+.+-+ .+ |.......++|.-+.+...++||++... ....+-..+|+.||+.++.++..+
T Consensus 160 ~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~--~gaNVQp~SGs~AN~aV~~ALl~P 237 (586)
T PLN02271 160 VCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEK--WGVNVQPYSCTSANFAVYTGLLLP 237 (586)
T ss_pred CCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccc--cccceeeccHHHHHHHHHHHhcCC
Confidence 35777777765554421 11 2333456689998999999999987521 112355668999999888777331
Q ss_pred HHHHHHhcCCCCCCCeEEeCCC---cchHHH------HHHHHcCCeeEEEe--ccCCccccCHHHHHH-hhhhCCeEEEE
Q 011057 141 WQNKRKAEGKPFDKPNIVTGAN---VQVCWE------KFARYFEVELKEVK--LSEGYYVMDPVKAVE-MVDENTICVAA 208 (494)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~~---~h~s~~------~~~~~~G~~v~~v~--~~~~~~~~d~~~L~~-~i~~~t~~vv~ 208 (494)
.++|+..+. .|.+.. +.+...|..++.++ ++++++.+|+++|++ +...+|++|++
T Consensus 238 -------------GD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~ 304 (586)
T PLN02271 238 -------------GDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILIC 304 (586)
T ss_pred -------------CCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEE
Confidence 257776444 444432 23455677666666 655568999999998 66778998888
Q ss_pred eeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEE
Q 011057 209 ILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV 288 (494)
Q Consensus 209 ~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~ 288 (494)
....++ ...|+++|.++|+++ |+++++|+||..|.++. ...+. ...++|+++++.|||+.+|.| |++
T Consensus 305 g~Sayp--r~~D~~~i~eIAdev------GA~LmvD~AH~aGLIa~--g~~~s--P~~~aDvvt~TTHKtLrGPrG-G~I 371 (586)
T PLN02271 305 GGSSYP--REWDYARFRQIADKC------GAVLMCDMAHISGLVAA--KECVN--PFDYCDIVTSTTHKSLRGPRG-GII 371 (586)
T ss_pred Cchhcc--CcCCHHHHHHHHHHc------CCEEEEECccccccccc--CcCCC--CCcCCcEEEeCCcccCCCCCc-eEE
Confidence 666666 667899999999999 99999999998876522 11111 124799999999999999999 777
Q ss_pred EEeCCCCcccccccc---------cCCCCC--CCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHH
Q 011057 289 IWRNKEDLPEELIFH---------INYLGA--DQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEG 357 (494)
Q Consensus 289 ~~~~~~~~~~~~~~~---------~~y~~~--~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~ 357 (494)
++++... ....... +++... ......+.+......++++..+++......++++.+...++++.|.+.
T Consensus 372 ~~r~~~~-~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~ 450 (586)
T PLN02271 372 FYRKGPK-LRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASA 450 (586)
T ss_pred Eeccccc-ccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 7765311 0000000 001000 000012333333455788888888776667789999999999999999
Q ss_pred HhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCC--CCceEEEEEecc----CCChHHHH
Q 011057 358 LEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADA--QHITVLRVVIRE----DFSRTLAE 431 (494)
Q Consensus 358 L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~--~~~~~lRvs~~~----~~t~~~id 431 (494)
|.+.| ++++.......++.+.+.+ .+++...+.+.|.+-||.+.....|... .....+|+.+.. .+.++|++
T Consensus 451 L~~~G-~~vv~ggTdnHlvLvDl~~-~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~ 528 (586)
T PLN02271 451 LLRRK-CRLVTGGTDNHLLLWDLTT-LGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFE 528 (586)
T ss_pred HHHCC-CeEeeCCCCcceeeecCcc-cCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHH
Confidence 99987 9998765456788888754 4567888889999999998655555431 112458988644 33446666
Q ss_pred HHHHHHHHHHH
Q 011057 432 RLVLDITKVLH 442 (494)
Q Consensus 432 ~~i~~l~~~~~ 442 (494)
...+-|.++++
T Consensus 529 ~iA~~i~~~~~ 539 (586)
T PLN02271 529 TIADFLLRAAQ 539 (586)
T ss_pred HHHHHHHHHHh
Confidence 65555555555
No 180
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.87 E-value=3.9e-20 Score=182.76 Aligned_cols=312 Identities=13% Similarity=0.048 Sum_probs=215.5
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcch-H
Q 011057 88 DEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQV-C 166 (494)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~-s 166 (494)
..++...++.+++.+.|.++++.+.+ ....+++.+||.++-.++..+... .+..+++.. .+. .
T Consensus 32 HRs~~F~~i~~e~~~~L~~l~~~~~~---~~v~~l~GsGT~a~Eaa~~nl~~~------------~g~~vLv~g-~FG~r 95 (374)
T TIGR01365 32 HRSKLGKEKLAEAIKKTREMLGVPAD---YLIGIVPASDTGAVEMALWSMLGC------------RGVDVLAWE-SFGKG 95 (374)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCCC---cEEEEECCchHHHHHHHHHHcCCC------------CCCeEEEEC-HHHHH
Confidence 46788899999999999999998642 123556778888888777766321 123566544 332 3
Q ss_pred HH-HHHHHcCC-eeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 011057 167 WE-KFARYFEV-ELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVD 244 (494)
Q Consensus 167 ~~-~~~~~~G~-~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (494)
|. +.|+.+|+ .++.+..+++ ..+|+++++. . +.|++++..|.||...|+++|+..+ + +.+++||
T Consensus 96 ~~~eia~~~g~~~v~~l~~~~g-~~~~~~~ve~--~---~~v~~vhnETSTGv~npv~~i~~~~--~------~~lliVD 161 (374)
T TIGR01365 96 WVTDVTKQLKLPDVRVLEAEYG-KLPDLKKVDF--K---NDVVFTWNGTTSGVRVPNGDFIPAD--R------EGLTICD 161 (374)
T ss_pred HHHHHHHhcCCCCcEEEcCCCC-CCCCHHHcCC--C---CCEEEecCCCchheecccccccccc--C------CCcEEEE
Confidence 45 78899999 4888887765 4789998873 1 2367999999999999997666322 5 7899999
Q ss_pred cccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCccccc-cc---ccCCCCCCC--------C
Q 011057 245 AASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEEL-IF---HINYLGADQ--------P 312 (494)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~-~~---~~~y~~~~~--------~ 312 (494)
++.+.+..++ ++ +++|++..+++|++++|+|+++++++++....... .. .+.|+.... .
T Consensus 162 avSs~g~~~l-------~~--d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 232 (374)
T TIGR01365 162 ATSAAFAQDL-------DY--HKLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIF 232 (374)
T ss_pred ccchhcCCCC-------Ch--hHCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhh
Confidence 9998876544 22 25999999999999999999999998764321100 00 001111000 0
Q ss_pred CcccccCcchHHHHHHHHHHHHhcHh-HHHHHHHHHHHHHHHHHHHHhhCCCeEEeec-C-C-CccEEEEEecCCCCC--
Q 011057 313 TFTLNFSKGSSQVIAQYYQLIRLGFE-GYRNVMENCHENAMVLKEGLEKTGRFNIVSK-D-E-GVPLVAFSLKDNKRH-- 386 (494)
Q Consensus 313 ~~~~~~s~~~~~~~a~~~al~~l~~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~-~-~~~~v~f~~~~~~~~-- 386 (494)
......|++...+.++..+++.+.++ |++++.+++.++++.++++|+++|.++++.. + . +..++++.+..+ ++
T Consensus 233 ~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~-~~~~ 311 (374)
T TIGR01365 233 EGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDP-AIDA 311 (374)
T ss_pred cCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCc-cccc
Confidence 11122344444444444555555565 8999999999999999999999986777653 1 1 344566776432 22
Q ss_pred ---C-----HHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 387 ---D-----EFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 387 ---~-----~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
+ ..++.+.|.++|+.+.....+ .. ...+||..++.++.+|++.+++.|+-+..
T Consensus 312 ~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~--~~-~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 312 LDEDAQADFAKELISTLEKEGVAYDIGSYR--DA-PSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred cccchhhHHHHHHHHHHHHCCEEEeccccc--cC-CCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 2 578999999999987433222 22 36799999999999999999998876654
No 181
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=6.2e-20 Score=183.20 Aligned_cols=292 Identities=17% Similarity=0.089 Sum_probs=195.1
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHH
Q 011057 91 PVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKF 170 (494)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~ 170 (494)
|....+| +.||++.|.+. +++|+||++|+.+++.++... +++|+++.+.|......
T Consensus 53 pt~~~Le----~~lA~leg~e~-------ivvt~gg~~Ai~~~l~all~~-------------Gd~Il~~~~~y~~~~~~ 108 (388)
T PRK08861 53 PNRGLLE----QTLSELESGKG-------AVVTNCGTSALNLWVSALLGP-------------DDLIVAPHDCYGGTYRL 108 (388)
T ss_pred chHHHHH----HHHHHHhCCCe-------EEEECCHHHHHHHHHHHHcCC-------------CCEEEEcCCchHHHHHH
Confidence 3444544 55999999753 899999999999888776321 26899988888754332
Q ss_pred ----HHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecc
Q 011057 171 ----ARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAA 246 (494)
Q Consensus 171 ----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (494)
....|++++.++ ..|++++++++.++|++|++++|+||||.+.|+++|.++|+++ ++++++|++
T Consensus 109 ~~~~~~~~gi~v~~vd------~~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~------gi~vIvDea 176 (388)
T PRK08861 109 FNTRANKGDFKVQFVD------QSDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAV------GALVAVDNT 176 (388)
T ss_pred HHHHHhcCCeEEEEEC------CCCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECC
Confidence 233466666664 2588999999998999999999999999999999999999999 999999999
Q ss_pred cccccccccCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHH
Q 011057 247 SGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQ 324 (494)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~ 324 (494)
|+.+.. ..+ .+ .++|+++.++|||++++.+ .|+++.+++... ..+.....+++. ..+
T Consensus 177 ~~~~~~--~~p---l~---~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~-~~~~~~~~~~G~------------~~~ 235 (388)
T PRK08861 177 FLTPVL--QKP---LE---LGADFVIHSTTKYINGHSDVIGGVLITKTKEHA-EELAWWGNCIGA------------TGT 235 (388)
T ss_pred cccccc--CCC---cc---cCCCEEEeecceeccCCCcceeEEEEecHHHHH-HHHHHHHhccCC------------CCC
Confidence 987532 111 12 2799999999999998776 466655543221 111111111111 112
Q ss_pred HHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCCCCCCH
Q 011057 325 VIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDNKRHDE 388 (494)
Q Consensus 325 ~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~ 388 (494)
....| +...|.+.+..++++..+++..+.+.|++.|.++ +..|. ...++++|.+++. ....
T Consensus 236 p~~a~--l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~-~~~~ 312 (388)
T PRK08861 236 PFDSY--MTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGS-FEQL 312 (388)
T ss_pred hHHHH--HHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCC-HHHH
Confidence 22334 3334556677889999999999999999999775 44332 0245899998531 1113
Q ss_pred HHHHHHHHhcCceee-----c-cccCCCC--------------CCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 389 FEVAELLRRFGWIVP-----A-YTMPADA--------------QHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 389 ~~l~~~L~~~Gi~v~-----~-~~~~~~~--------------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
..+.+.|.--.+.++ + ...|... -....+|+|++- |+++.+++||+++++.+.+
T Consensus 313 ~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----E~~~dli~Dl~~al~~~~~ 386 (388)
T PRK08861 313 KVFVKALALFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGL----EDAQDLIADLDQAFAKAAE 386 (388)
T ss_pred HHHHhcCCcceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHHHHHh
Confidence 344444432111110 0 0011100 113579999985 7889999999999998765
No 182
>PRK08175 aminotransferase; Validated
Probab=99.87 E-value=5.1e-19 Score=179.26 Aligned_cols=344 Identities=13% Similarity=0.038 Sum_probs=215.5
Q ss_pred CCCCCcccccccCCC-hHHHHHHHHHHhcc-cCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHH
Q 011057 54 GNPRLNLASFVTTWM-EPECDKLMMAAINK-NYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIM 131 (494)
Q Consensus 54 ~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~ 131 (494)
+.+.+.+..+.+... ++.+.+.+.+.+.. ....|....+..++++.+.+++.+.+|.+.+. ...+++|+|+++++.
T Consensus 28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~~i~~t~G~~~~l~ 105 (395)
T PRK08175 28 GEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDP--ESEAIVTIGSKEGLA 105 (395)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCcEEEccCcHHHHH
Confidence 344455555444432 34455555555433 23445556688899999999998877775321 124889999999998
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh---CCeEEEE
Q 011057 132 LAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE---NTICVAA 208 (494)
Q Consensus 132 ~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~t~~vv~ 208 (494)
+.+.++.. .+++|+++.++|..+...++..|++++.++++++ ..+.+++++++.. ++++|++
T Consensus 106 ~~~~~~~~-------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~l~~~l~~~~~~~~~v~i 170 (395)
T PRK08175 106 HLMLATLD-------------HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEG--VDFFNELERAIRESYPKPKMMIL 170 (395)
T ss_pred HHHHHhCC-------------CCCEEEEcCCCCcchHHHHHHcCCeEEEEecccC--CCcHHHHHHHHhhccCCceEEEE
Confidence 76665532 1268999999999888888899999999998764 3457888887763 6788999
Q ss_pred eeCCCCcccccCH---HHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccC---CCceEEEEcCcccC-Cc
Q 011057 209 ILGSTLNGEFEDV---KLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRL---PLVKSINVSGHKYG-LV 281 (494)
Q Consensus 209 ~~~~~~tG~~~~l---~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~---~~~D~~~~~~hK~l-~~ 281 (494)
++|+||||.+.+. ++|.++|+++ ++++++|++|+.+.. ........... ....++..++.|.+ .+
T Consensus 171 ~~p~NPtG~~~~~~~~~~i~~~a~~~------~i~ii~De~y~~l~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~p 242 (395)
T PRK08175 171 GFPSNPTAQCVELEFFEKVVALAKRY------DVLVVHDLAYADIVY--DGWKAPSIMQVPGAKDVAVEFFTLSKSYNMA 242 (395)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHc------CcEEEEecchHhhcc--CCCCCcchhcCCCcccCEEEEeeccccccCc
Confidence 9999999998776 7899999999 999999999986532 11000000111 12335567888987 56
Q ss_pred CCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh--cHhHHHHHHHHHHHHHHHHHHHHh
Q 011057 282 YAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL--GFEGYRNVMENCHENAMVLKEGLE 359 (494)
Q Consensus 282 p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l--~~~g~~~~~~~~~~~a~~l~~~L~ 359 (494)
+.++||++.. +..+ ..+.....+... +.. .. .+.+++..+ ....+++..+.+.++++++.+.|+
T Consensus 243 GlRiG~~~~~-~~l~-~~~~~~~~~~~~--------~~~-~~---~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~ 308 (395)
T PRK08175 243 GWRIGFMVGN-PELV-SALARIKSYHDY--------GTF-TP---LQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLH 308 (395)
T ss_pred chhheeeeCC-HHHH-HHHHHHHhhccc--------CCC-cH---HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788988753 3222 221111111100 111 11 222223333 233355667777788899999999
Q ss_pred hCCCeEEeecCCCccEEEEEecCCC-CCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHH
Q 011057 360 KTGRFNIVSKDEGVPLVAFSLKDNK-RHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~-~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
+++ +.+..+. ..+++.+.++..- ..+..+++++|. +.|+.+....... ..+..++|+++. ...+.+...++.|
T Consensus 309 ~~~-~~~~~p~-~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~-~~~~~~lRis~~--~~~~~~~~al~~l 383 (395)
T PRK08175 309 EAG-WMVEMPK-ASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFG-DYGDTHVRFALI--ENRDRIRQAIRGI 383 (395)
T ss_pred HcC-CcccCCC-EEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhC-cCCCCeEEEEeC--CCHHHHHHHHHHH
Confidence 985 7654332 4667777775321 234678888765 6799875433221 123457999986 2445555444444
Q ss_pred HHHH
Q 011057 438 TKVL 441 (494)
Q Consensus 438 ~~~~ 441 (494)
.+++
T Consensus 384 ~~~l 387 (395)
T PRK08175 384 KAMF 387 (395)
T ss_pred HHHH
Confidence 4444
No 183
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=4e-19 Score=180.00 Aligned_cols=304 Identities=18% Similarity=0.114 Sum_probs=194.2
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHH----HHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKF----ARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~----~~~~ 174 (494)
++++.+|++.|.+. .++|++|++|+.+++.++.. . +++||++...|.+.... +...
T Consensus 68 ~le~~lA~l~g~~~-------av~~sSGt~Al~~al~~ll~--------~-----Gd~Vi~~~~~y~~t~~~~~~~l~~~ 127 (433)
T PRK08134 68 VLEERVAALEGGVG-------AIATASGQAALHLAIATLMG--------A-----GSHIVASSALYGGSHNLLHYTLRRF 127 (433)
T ss_pred HHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHHhC--------C-----CCEEEEeCCccHHHHHHHHHHHhhC
Confidence 45566999999864 78999999999988876622 1 26899999888755443 3457
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++++ |+++++++|+++|++|++.+++|++|.+.|+++|+++||++ +++++||++++.+..
T Consensus 128 Gi~v~~vd~~------d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~------gi~livD~t~a~~~~-- 193 (433)
T PRK08134 128 GIETTFVKPG------DIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEA------GVPLLVDSTFTTPYL-- 193 (433)
T ss_pred CeEEEEECCC------CHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 9998888853 78999999999999999999999999999999999999999 999999999987543
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc-eEEEEEeCCCCc-cc--cc-ccccCCCCC--C--CC-----Cccc----
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG-IGWVIWRNKEDL-PE--EL-IFHINYLGA--D--QP-----TFTL---- 316 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~G~~~~~~~~~~-~~--~~-~~~~~y~~~--~--~~-----~~~~---- 316 (494)
..+ + ..++|++++|+|||++++.. +|.+++...... .. .+ .....+.+. . .. .+..
T Consensus 194 ~~p-----l-~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 267 (433)
T PRK08134 194 LRP-----F-EHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARR 267 (433)
T ss_pred CCc-----h-hcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHH
Confidence 111 1 13799999999999976543 566655322111 00 00 000011000 0 00 0000
Q ss_pred ccCcc-hHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC----------------CCccEEEE
Q 011057 317 NFSKG-SSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD----------------EGVPLVAF 378 (494)
Q Consensus 317 ~~s~~-~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~----------------~~~~~v~f 378 (494)
.+.+. +...-..-+++..-|-+.+..++++..+++..+.+.|+++|.++ +..+. ...++++|
T Consensus 268 ~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~ 347 (433)
T PRK08134 268 EGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSF 347 (433)
T ss_pred HHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEE
Confidence 00000 00011122223334556678899999999999999999998765 33221 02458899
Q ss_pred EecCCCCCCHHHHHHHHHhcCceee-----c-cccCCC--------------CCCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 379 SLKDNKRHDEFEVAELLRRFGWIVP-----A-YTMPAD--------------AQHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 379 ~~~~~~~~~~~~l~~~L~~~Gi~v~-----~-~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
.+++. ......|.+.|.--.+..+ + ...|.. .-....+|+|++- |+.+.++++|+
T Consensus 348 ~l~~~-~~~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl----E~~~dli~dl~ 422 (433)
T PRK08134 348 DLKGG-RAAGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGL----EDADDLIDDLK 422 (433)
T ss_pred EecCC-HHHHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHH
Confidence 98541 1123455555542111100 0 011110 0113579999985 78889999999
Q ss_pred HHHHHHhcC
Q 011057 439 KVLHELDSL 447 (494)
Q Consensus 439 ~~~~~l~~~ 447 (494)
++++.+++.
T Consensus 423 ~Al~~~~~~ 431 (433)
T PRK08134 423 RALKAAEKA 431 (433)
T ss_pred HHHHhhhhc
Confidence 999876553
No 184
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=6.7e-20 Score=182.74 Aligned_cols=293 Identities=16% Similarity=0.121 Sum_probs=193.5
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH
Q 011057 90 YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK 169 (494)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (494)
.|....+| +.+|++.|... +++++||++|+..++.++.+. +++||++++.|..+..
T Consensus 60 npt~~~Le----~~iA~le~~~~-------~~~~~sG~~Ai~~~l~all~~-------------GD~Vvv~~~~Y~~t~~ 115 (394)
T PRK09028 60 TPTHFAFQ----AAIVELEGGAG-------TALYPSGAAAISNALLSFLKA-------------GDHLLMVDSCYEPTRD 115 (394)
T ss_pred CchHHHHH----HHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEECCCcHHHHH
Confidence 34444555 55888877643 789999999999887766331 2689998888866654
Q ss_pred H----HHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 011057 170 F----ARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDA 245 (494)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (494)
. ....|++++.++.+ +.+.++++++++|++|++.+++||+|.+.|+++|+++||++ |++++||+
T Consensus 116 l~~~~l~~~Gi~v~~v~~~------~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~------g~~lvvD~ 183 (394)
T PRK09028 116 LCDKILKGFGIETTYYDPM------IGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEH------DIVVMLDN 183 (394)
T ss_pred HHHHhhhhcceEEEEECCC------CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEEC
Confidence 3 34568887776532 45789999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCcccccccCCCceEEEEcCcccCCcCCce--EEEEEeCCCCcccccccccCCCCCCCCCcccccCcchH
Q 011057 246 ASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGI--GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSS 323 (494)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~--G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~ 323 (494)
+|+.+.. ..| . + .++|++..++|||++++.++ |++ +.++... ..+.....+.+. . .
T Consensus 184 t~a~p~~--~~P-l--~---~GaDivv~S~tK~l~Gh~d~~~G~~-~~~~~~~-~~l~~~~~~~G~---------~---~ 241 (394)
T PRK09028 184 TWASPIN--SRP-F--E---MGVDISIQAATKYIVGHSDVMLGTA-TANEKHW-DQLREHSYLMGQ---------C---T 241 (394)
T ss_pred Ccccccc--CCc-c--c---cCceEEEEeCCeEecCCCCEEEEEE-ECCHHHH-HHHHHHHHhcCC---------C---C
Confidence 9987532 222 1 1 38999999999999888654 443 4443221 111111111111 1 1
Q ss_pred HHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCCCCCC
Q 011057 324 QVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDNKRHD 387 (494)
Q Consensus 324 ~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~ 387 (494)
.....|..+ .|-..+.-++++..+++..+.+.|++.|.++ +..|. ...++++|.++......
T Consensus 242 ~p~~a~l~~--rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~ 319 (394)
T PRK09028 242 SPDDVYLAM--RGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKA 319 (394)
T ss_pred CHHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHH
Confidence 222334333 3455577889999999999999999999765 44431 02469999996321112
Q ss_pred HHHHHHHHHhcCcee------eccccCCC----------CCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 388 EFEVAELLRRFGWIV------PAYTMPAD----------AQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 388 ~~~l~~~L~~~Gi~v------~~~~~~~~----------~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
...+.+.|.--.+.+ +....|.. ......+|+|++- |+.+.+++||+++++..+.
T Consensus 320 ~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~~~~~~~~~~~~~~liR~svGl----Ed~~dLi~Dl~~Al~~~~~ 390 (394)
T PRK09028 320 VTALVEGMQHFKMGFSWGGFESLILGVFGINKLRTATNWDFSKPLIRLHIGL----EDVDDLIADLEAGFERYNA 390 (394)
T ss_pred HHHHHHhCCcceEecccCCCcceeECCCCcCccCchhhhcCCCCeEEEEeCc----CCHHHHHHHHHHHHHHHHH
Confidence 344555543111110 00011110 0112579999985 7788899999999987664
No 185
>PRK06855 aminotransferase; Validated
Probab=99.87 E-value=4.2e-19 Score=181.50 Aligned_cols=337 Identities=10% Similarity=-0.004 Sum_probs=212.3
Q ss_pred CChHHHHHHHHHHhcc-cCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINK-NYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKR 145 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~ 145 (494)
.+++.+.+++.+++.. ....|....+..++++.+.+|+.+..|.+.+ ...+++|+|+++++.+++. +..
T Consensus 48 ~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~---~~~I~it~G~~~al~~~~~-l~~------ 117 (433)
T PRK06855 48 KIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQIT---PDDIIFFNGLGDAIAKIYG-LLR------ 117 (433)
T ss_pred CCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCC---HhHEEEcCcHHHHHHHHHH-hcC------
Confidence 3456678888777644 2345666678899999999999887776542 2358999999999887753 321
Q ss_pred HhcCCCCCCCeEEeCCCcchHHHHHH-HHcCCeeEEEeccC-CccccCHHHHHHhhh--hCCeEEEEeeCCCCcccccC-
Q 011057 146 KAEGKPFDKPNIVTGANVQVCWEKFA-RYFEVELKEVKLSE-GYYVMDPVKAVEMVD--ENTICVAAILGSTLNGEFED- 220 (494)
Q Consensus 146 ~~~g~~~~~~~vi~~~~~h~s~~~~~-~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~--~~t~~vv~~~~~~~tG~~~~- 220 (494)
.+++|++++++|+.+..+. ...|+.++.+++++ +++.+|+++|++++. ++++++++++|+||||.+.+
T Consensus 118 -------~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~ 190 (433)
T PRK06855 118 -------REARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPK 190 (433)
T ss_pred -------CCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCH
Confidence 1268999999998766542 34588888888874 447899999999996 35688999999999999966
Q ss_pred --HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc--ccccCCCceEEEEcCcccC-CcCCceEEEEEeCCC-
Q 011057 221 --VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE--WDFRLPLVKSINVSGHKYG-LVYAGIGWVIWRNKE- 294 (494)
Q Consensus 221 --l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l-~~p~g~G~~~~~~~~- 294 (494)
+++|+++|+++ ++|+++|++|+.+.. ...... ..+..+.-.++..++.|.+ ++++++||+++.+..
T Consensus 191 ~~~~~l~~~a~~~------~~~II~De~Y~~l~~--~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~ 262 (433)
T PRK06855 191 EILREIVDIAREY------DLFIICDEIYNNIVY--NGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADK 262 (433)
T ss_pred HHHHHHHHHHHHc------CCEEEEecccccccc--CCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCch
Confidence 56778889999 999999999987642 111100 0111111225667888988 588999999874311
Q ss_pred --CcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH----hHHHHHHHHHHHHHHHHHHHHhhCCCeEEee
Q 011057 295 --DLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF----EGYRNVMENCHENAMVLKEGLEKTGRFNIVS 368 (494)
Q Consensus 295 --~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 368 (494)
.+...+.....+.... .. .+.+.+.++..++.. ..+++..+.+.++++.+.+.|++++++.+..
T Consensus 263 ~~~~~~~~~~~~~~~~~~-------~~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~ 332 (433)
T PRK06855 263 DEVFKKYINSILNAKMIE-------VC---STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNR 332 (433)
T ss_pred hhHHHHHHHHHHHhhccc-------cC---CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccC
Confidence 1111100000000000 01 122445555666532 3355666777788889999998886666443
Q ss_pred cCCCccEEE-EEecCCC-------------------------CCCHHHHHH-HHHhcCceeeccccCCCCCCceEEEEEe
Q 011057 369 KDEGVPLVA-FSLKDNK-------------------------RHDEFEVAE-LLRRFGWIVPAYTMPADAQHITVLRVVI 421 (494)
Q Consensus 369 ~~~~~~~v~-f~~~~~~-------------------------~~~~~~l~~-~L~~~Gi~v~~~~~~~~~~~~~~lRvs~ 421 (494)
+ ..+++. +.+++.. ..+..+++. .+.+.|+.+....... . ....+|+++
T Consensus 333 p--~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~-~-~~~~~Rls~ 408 (433)
T PRK06855 333 T--NGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFC-T-ELNGFRVTL 408 (433)
T ss_pred C--CeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCC-C-CCCceEEEE
Confidence 3 345544 4443210 012345554 4667898764332221 1 123489999
Q ss_pred ccCCChHHHHHHHHHHHHHHHH
Q 011057 422 REDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 422 ~~~~t~~~id~~i~~l~~~~~~ 443 (494)
.. .+.++++..++.|.+++++
T Consensus 409 ~~-~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 409 LE-RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred CC-CcHHHHHHHHHHHHHHHHH
Confidence 75 4567777666666666643
No 186
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.86 E-value=8.3e-20 Score=180.36 Aligned_cols=275 Identities=17% Similarity=0.089 Sum_probs=186.0
Q ss_pred HHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCe
Q 011057 98 NRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVE 177 (494)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~ 177 (494)
.++++++++++|.++ ..+++|+|+++++..+..++ . ...|+++.++|..+...++..|++
T Consensus 50 ~~lr~~la~~~~~~~-----~~i~~t~G~~~~i~~~~~~l-~--------------~g~vl~~~p~y~~~~~~~~~~g~~ 109 (330)
T TIGR01140 50 DELRAAAAAYYGLPA-----ASVLPVNGAQEAIYLLPRLL-A--------------PGRVLVLAPTYSEYARAWRAAGHE 109 (330)
T ss_pred HHHHHHHHHHhCCCh-----hhEEECCCHHHHHHHHHHHh-C--------------CCeEEEeCCCcHHHHHHHHHcCCE
Confidence 456777889899864 34889999999988654332 1 125888899999999999999999
Q ss_pred eEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 178 LKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 178 v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
++.++ |++.+++++ +++++|++++|+||||.+.+ +++|+++|+++ |+++++|++|+.+...
T Consensus 110 ~~~~~--------d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~~- 173 (330)
T TIGR01140 110 VVELP--------DLDRLPAAL-EELDVLVLCNPNNPTGRLIPPETLLALAARLRAR------GGWLVVDEAFIDFTPD- 173 (330)
T ss_pred EEEeC--------CHHHHHhhc-ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhc------CCEEEEECcccccCCc-
Confidence 88876 678888888 45778999999999999988 66677888999 9999999999876421
Q ss_pred cCCcccccccCCCceEEEEcCcccCC-cCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLI 333 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~ 333 (494)
+..........-+.+..+++|+++ ++.++|+++.+++ .+ ..+.. +.. . .+ .+.+++.++.+
T Consensus 174 --~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~-~~l~~---~~~----~----~~---~s~~~q~~~~~ 235 (330)
T TIGR01140 174 --ASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPA-LL-ARLRE---ALG----P----WT---VNGPARAAGRA 235 (330)
T ss_pred --cchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHH-HH-HHHHh---cCC----C----CC---chHHHHHHHHH
Confidence 111100111234677889999875 5577899987543 22 22111 110 0 01 12334555555
Q ss_pred HhcHhHH-HHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCC
Q 011057 334 RLGFEGY-RNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQ 412 (494)
Q Consensus 334 ~l~~~g~-~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~ 412 (494)
.+...++ +...+++.++++++.+.|++++.+++.. + ...++.+.+. +..+++++|.++|+.+........ .
T Consensus 236 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~-~~~f~~~~~~-----~~~~l~~~l~~~gi~v~pg~~f~~-~ 307 (330)
T TIGR01140 236 ALADTAWQAATRARLAAERARLAALLARLGGLEVVG-G-TALFLLVRTP-----DAAALHEALARRGILIRDFDNFPG-L 307 (330)
T ss_pred HHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceECC-C-CCeEEEEEcC-----CHHHHHHHHHHCCEEEEECCCCCC-C
Confidence 5554433 5667788889999999999997665532 2 3455555542 357899999999998865443321 2
Q ss_pred CceEEEEEeccCCChHHHHHHHHHH
Q 011057 413 HITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 413 ~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
+..++|+++... .++ ++|+.+|
T Consensus 308 ~~~~iRi~~~~~--~~~-~~~~~~l 329 (330)
T TIGR01140 308 DPRYLRFALPTD--EEN-DRLEEAL 329 (330)
T ss_pred CCCEEEEEecCH--HHH-HHHHHhh
Confidence 345899998742 233 6666554
No 187
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.86 E-value=3.2e-19 Score=178.43 Aligned_cols=325 Identities=13% Similarity=0.092 Sum_probs=208.1
Q ss_pred CcccccccC-CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHH
Q 011057 58 LNLASFVTT-WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLA 136 (494)
Q Consensus 58 ~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a 136 (494)
++|.....+ ++++.+.+++.+++.. ...|.. ++.. ++++.+|+++++++ ..+++|+|+++++.+++.+
T Consensus 25 i~l~~~~n~~~~~~~~~~a~~~~~~~-~~~Y~~-~~~~----~Lr~aia~~~~v~~-----~~I~it~G~~~~i~~~~~~ 93 (360)
T PRK07392 25 LDFSASINPLGPPESVIAAIQSALSA-LRHYPD-PDYR----ELRLALAQHHQLPP-----EWILPGNGAAELLTWAGRE 93 (360)
T ss_pred EEeCCcCCCCCCCHHHHHHHHHHHHH-hhcCCC-cCHH----HHHHHHHHHhCcCh-----hhEEECCCHHHHHHHHHHH
Confidence 334443332 3456777777766653 223322 2333 45566777778875 4599999999999877765
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCcc----ccCHHHHHHhhhhCCeEEEEeeCC
Q 011057 137 FKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYY----VMDPVKAVEMVDENTICVAAILGS 212 (494)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~----~~d~~~L~~~i~~~t~~vv~~~~~ 212 (494)
+.. ++.|+++.+++..+...++..|++++.+++++++. ..+++++++.. ++++++++++|+
T Consensus 94 l~~--------------g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~ 158 (360)
T PRK07392 94 LAQ--------------LRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPH 158 (360)
T ss_pred hCC--------------CCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCC
Confidence 411 24799999999999999999999999999975422 25677776654 467899999999
Q ss_pred CCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc-CCCceEEEEcCcccCC-cCCceEEEEE
Q 011057 213 TLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGL-VYAGIGWVIW 290 (494)
Q Consensus 213 ~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~hK~l~-~p~g~G~~~~ 290 (494)
||||.+.+.++|.++++++ ++ +++|++|..+..+...+.....+. .+.+ ++..++.|.++ ++.++||++.
T Consensus 159 NPTG~~~~~~~l~~l~~~~------~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~v-i~i~S~SK~~~l~GlRiG~~v~ 230 (360)
T PRK07392 159 NPTGKLWSREAILPLLEQF------AL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNL-IILRSLTKFYSLPGLRLGYAIA 230 (360)
T ss_pred CCCCCCcCHHHHHHHHHHC------CE-EEEECchhhhccCccccchHHHhhcCCCE-EEEEechhhhcCCchheeeeeC
Confidence 9999999999999999998 85 677999987642110000000011 1223 44557788775 8899999987
Q ss_pred eCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHH-HHHHHHHHHHHHHHHHHhhCCCeEEeec
Q 011057 291 RNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYR-NVMENCHENAMVLKEGLEKTGRFNIVSK 369 (494)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~-~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (494)
..+ .+ +.+.. +.. . . ..+.+.+.++...+....+. ...+...+.++++.+.|+.++++.+..
T Consensus 231 ~~~-~~-~~~~~---~~~----~----~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~- 293 (360)
T PRK07392 231 HPD-RL-QRWQQ---WRD----P----W---PVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPLP- 293 (360)
T ss_pred CHH-HH-HHHHh---hCC----C----C---CCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-
Confidence 432 22 11111 000 0 0 12334455555555443333 344556677888999999887777653
Q ss_pred CCCccEEEEEecCCCCCCHHHHHHHH-HhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 370 DEGVPLVAFSLKDNKRHDEFEVAELL-RRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 370 ~~~~~~v~f~~~~~~~~~~~~l~~~L-~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
+ ..+++.+.+.. +..+++++| .+.|+.+....... ..+..++|++++ +.++.++|.+.|++++.
T Consensus 294 ~-~~~fl~~~~~~----~~~~l~~~ll~~~gv~v~pg~~f~-~~~~~~iRi~~~---~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 294 S-AANFLLVQSQG----SALQLQEKLLQQHRILIRDCLSFP-ELGDRYFRVAVR---TEAENQRLLEALAAILA 358 (360)
T ss_pred C-CCCEEEEEcCC----CHHHHHHHHHhhCCEEEEeCCCCC-CCCCCEEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 2 45566655532 567888875 56799875443221 123468999998 45566777777776543
No 188
>PLN02672 methionine S-methyltransferase
Probab=99.86 E-value=3.2e-19 Score=193.61 Aligned_cols=343 Identities=10% Similarity=0.067 Sum_probs=224.4
Q ss_pred CCCCCcccccccCC-ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHH
Q 011057 54 GNPRLNLASFVTTW-MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIML 132 (494)
Q Consensus 54 ~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~ 132 (494)
+++.+.+..+.+.. +++.+.+++.+++..... +.+..++.+.+++|+++.+|++.+. ...+++|+|+++++..
T Consensus 696 g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~----s~g~pdlr~aLa~~la~~~Gv~~d~--~e~IIvt~Gs~elL~l 769 (1082)
T PLN02672 696 ESSLIHMDVDESFLPVPSAVKASIFESFVRQNI----SESETDPRPSILQFIKSNYGFPTDS--CTEFVYGDTSLALFNK 769 (1082)
T ss_pred CCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCC----CCCChHHHHHHHHHHHHHhCcCCCC--CCEEEEeCCHHHHHHH
Confidence 34555666655554 456788888877654221 2234456788999999999997631 1257888888888877
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhh-CCeEEEEee
Q 011057 133 AGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDE-NTICVAAIL 210 (494)
Q Consensus 133 a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~-~t~~vv~~~ 210 (494)
++.+..+. ++.|+++.++|+.+..+++..|++++.+|+++ +++.+|+++|++++.+ .+++|++++
T Consensus 770 ll~aLl~p-------------GD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~n 836 (1082)
T PLN02672 770 LVLCCVQE-------------GGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISG 836 (1082)
T ss_pred HHHHHcCC-------------CCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEEC
Confidence 77766431 26899999999999999999999999999973 4589999999999976 346889999
Q ss_pred CC-CCccccc---CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcc-cccc-----cC------CCceEEEEc
Q 011057 211 GS-TLNGEFE---DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPEL-EWDF-----RL------PLVKSINVS 274 (494)
Q Consensus 211 ~~-~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~-----~~------~~~D~~~~~ 274 (494)
|+ ||||.+. .+++|+++|++| +++|++|++|+.... ..... ...+ .. ..+-++...
T Consensus 837 PnhNPTG~v~S~eeLe~Llela~k~------di~VIsDEaYsdL~F--d~~~~s~~sl~s~l~~~~~~sks~nVIvL~Sf 908 (1082)
T PLN02672 837 PTINPTGLLYSNSEIEEILSVCAKY------GARVIIDTSFSGLEY--DTSGWGGWDLKSILSRLKSSNPSFAVALLGGL 908 (1082)
T ss_pred cCCCCcCccCCHHHHHHHHHHHHHc------CCEEEEeCCCCcccc--CCCCCcccchhhHHHHhccccCCceEEEEeCc
Confidence 98 9999994 467788889999 999999999986432 11100 0000 00 023333344
Q ss_pred CcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc------HhHHHHHHHHHH
Q 011057 275 GHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG------FEGYRNVMENCH 348 (494)
Q Consensus 275 ~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~------~~g~~~~~~~~~ 348 (494)
++|+++++.++||++..++..+ ..+.....+. ... ....+++.+++.++. ...+++..+.+.
T Consensus 909 SKkf~lpGLRIGylIap~~eLi-~~l~~~~~~s----------~~~-~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk 976 (1082)
T PLN02672 909 STELLSGGHEFGFLALNDSVLI-DAFHSAPGLS----------RPH-STLKYTIKKLLGLKNQKSSDLLDGVAEQKKILK 976 (1082)
T ss_pred HHhhccHHHHheeEEeCCHHHH-HHHHHhhhhc----------CCC-cHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHH
Confidence 5588999999999987554222 2211111110 000 112233333333221 123455666678
Q ss_pred HHHHHHHHHHhhCCCeEEeecCCCccEEEEEecC-----------C-----CCCCHHHHHHHHHhc-CceeeccccCCCC
Q 011057 349 ENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKD-----------N-----KRHDEFEVAELLRRF-GWIVPAYTMPADA 411 (494)
Q Consensus 349 ~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~-----------~-----~~~~~~~l~~~L~~~-Gi~v~~~~~~~~~ 411 (494)
++++++.+.|++.+ +++..+ ..+++.|.... . .+.+..++++.|.++ |+.+......
T Consensus 977 ~rRd~L~e~L~~~G-i~v~~P--eGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~F--- 1050 (1082)
T PLN02672 977 SRAERLKETLEACG-WDVLEP--QGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWT--- 1050 (1082)
T ss_pred HHHHHHHHHHHHCC-CeEecC--CcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCccc---
Confidence 88899999999985 776544 45666654211 0 024678899999876 8887543321
Q ss_pred CCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 412 QHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 412 ~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
...+++|+++.. +.+++++.++.|+++.+.
T Consensus 1051 G~~g~~RIsfa~--~~e~LeeALerL~kf~~~ 1080 (1082)
T PLN02672 1051 GIPGYCRFSFAL--EDSEFDRALKAIARFKEL 1080 (1082)
T ss_pred CCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 124589999974 666788777777766553
No 189
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.86 E-value=3.4e-19 Score=179.49 Aligned_cols=288 Identities=17% Similarity=0.121 Sum_probs=190.1
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHH----HHHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWE----KFARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~----~~~~~~ 174 (494)
++++.+|+++|.+. ..++++|+.|+..++.+... .+++|+++.+.|.+.. ..+...
T Consensus 69 ~Le~~lA~l~G~~~-------~~~~~sG~~Ai~~~l~~~l~-------------~Gd~Vl~~~~~y~~~~~~~~~~~~~~ 128 (398)
T PRK07504 69 MFEKRMCALEGAED-------ARATASGMAAVTAAILCQVK-------------AGDHVVAARALFGSCRYVVETLLPRY 128 (398)
T ss_pred HHHHHHHHHhCCCe-------eeEecCHHHHHHHHHHHHhC-------------CCCEEEEcCCchhHHHHHHHHHHhhc
Confidence 45566999999975 45688899998766655422 1268999988887543 334567
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++ .+|+++++++++++|++|++++++||+|.+.|+++|.++|+++ |++++||++|+.+..
T Consensus 129 G~~v~~vd------~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~------gi~lvvD~a~a~~~~-- 194 (398)
T PRK07504 129 GIESTLVD------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQA------GAKLVVDNVFATPLF-- 194 (398)
T ss_pred CeEEEEEC------CCCHHHHHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHc------CCEEEEECCcccccc--
Confidence 88888875 3789999999999999999999999999999999999999999 999999999986532
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcC-CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLI 333 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~ 333 (494)
..+ . . .++|+++.|+|||+.++ .+.|++++.++..+...+. .+... .+.. .....+|.+++
T Consensus 195 ~~~-~--~---~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~---~~~~~-------~g~~--~s~~~A~~~l~ 256 (398)
T PRK07504 195 QKP-L--E---LGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQ---DYFRH-------TGPS--LSPFNAWTLLK 256 (398)
T ss_pred CCc-h--h---hCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHH---HHHHH-------hCCC--CCHHHHHHHHh
Confidence 111 1 1 26899999999999664 3465555555433321111 01100 0111 12233444444
Q ss_pred HhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC----C-----------CccEEEEEecCCCCCCHHHHHHHHHh
Q 011057 334 RLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD----E-----------GVPLVAFSLKDNKRHDEFEVAELLRR 397 (494)
Q Consensus 334 ~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~----~-----------~~~~v~f~~~~~~~~~~~~l~~~L~~ 397 (494)
. .+.+..++++..+++.++.+.|++.+++. +..|. + ..++++|.+++. ......+.+.|.-
T Consensus 257 ~--L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-~~~~~~~~~~l~~ 333 (398)
T PRK07504 257 G--LETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGG-KEAAFRFLNALKI 333 (398)
T ss_pred c--cchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCC-HHHHHHHHHhCCc
Confidence 3 34466788888899999999999998765 33332 0 256999999542 1123445555542
Q ss_pred cCceee-----c-cccCCC--------------CCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 398 FGWIVP-----A-YTMPAD--------------AQHITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 398 ~Gi~v~-----~-~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
-.+.++ + ...|.. .-....+|+|++- |+.+.+++||+++++.++
T Consensus 334 ~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~~ 397 (398)
T PRK07504 334 VRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGL----EDTDDLIEDLAAALKKVR 397 (398)
T ss_pred ceecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhhh
Confidence 221110 0 011110 0123579999985 778889999999988654
No 190
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.86 E-value=5.9e-19 Score=176.41 Aligned_cols=329 Identities=12% Similarity=0.104 Sum_probs=204.8
Q ss_pred hHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhc
Q 011057 69 EPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAE 148 (494)
Q Consensus 69 ~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~ 148 (494)
.++..+++.+++..+... ... .+.+++++++++++|.+. +++|+|||+|+.+++.++.-
T Consensus 10 ~~~e~~a~~~~~~~~~~~-~~g----~~~~~~e~~la~~~g~~~-------~v~~~sgt~aL~~~l~al~~--------- 68 (376)
T TIGR02379 10 TGQELEYIAEAISEGKLS-GDG----PFSRRCETWLENRTGTKK-------ALLTPSCTAALEMAALLLDI--------- 68 (376)
T ss_pred CHHHHHHHHHHHHcCCcc-CCc----HHHHHHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHcCC---------
Confidence 344567777777654331 122 234456677888888864 88999999999887766511
Q ss_pred CCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHH
Q 011057 149 GKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL 228 (494)
Q Consensus 149 g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la 228 (494)
..+++|++++.+|.+...++...|++++.++++++++.+|+++++++++++|++|+ +++++|...|+++|.++|
T Consensus 69 ---~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d~~~I~~la 142 (376)
T TIGR02379 69 ---QPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITHRTKAIV---PVHYAGVACDMDTIMALA 142 (376)
T ss_pred ---CCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCCCCccCHHHHHHHH
Confidence 01368999999999999999999999999999876688999999999998898875 556789999999999999
Q ss_pred HHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCccccccccc----
Q 011057 229 AEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHI---- 304 (494)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~---- 304 (494)
+++ ++++++|+||+.+.. +... ... ....+.++++...|.+.++...|++++.+++..........
T Consensus 143 ~~~------~i~vIeDaa~~~g~~-~~~~-~~g--~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~ 212 (376)
T TIGR02379 143 NKH------QLFVIEDAAQGVMST-YKGR-ALG--SIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTN 212 (376)
T ss_pred HHC------CCEEEEECccccCCc-cCCc-ccC--CCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCC
Confidence 999 999999999987642 1111 000 11124445555555565443457777776543322111110
Q ss_pred --CCCCCC--C---CCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC--C-eEEeecCC---
Q 011057 305 --NYLGAD--Q---PTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTG--R-FNIVSKDE--- 371 (494)
Q Consensus 305 --~y~~~~--~---~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~--~-~~~~~~~~--- 371 (494)
.+.... . .....++..+...++-....| +.+.+..++.++++++..++|..+. + .++...+.
T Consensus 213 ~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL-----~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~ 287 (376)
T TIGR02379 213 RSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQL-----EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQ 287 (376)
T ss_pred CccccccCCCcceeeeecccCCccHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCe
Confidence 000000 0 001111111111111111222 3355677777788888888887754 1 22211111
Q ss_pred -CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCC-------------------CceEEEEEeccCCChHHHH
Q 011057 372 -GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQ-------------------HITVLRVVIREDFSRTLAE 431 (494)
Q Consensus 372 -~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~-------------------~~~~lRvs~~~~~t~~~id 431 (494)
...++.+.+.. ..+.+++.+.|.++||..+.+..|.... ....+.+-++...+.++++
T Consensus 288 ~~~~~~~i~~~~--~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~ 365 (376)
T TIGR02379 288 HNAHMFYIKLKD--EDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQA 365 (376)
T ss_pred eeeEEEEEEECC--cCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHH
Confidence 11244455532 2467899999999999764322121100 0234666667788999999
Q ss_pred HHHHHHHHHH
Q 011057 432 RLVLDITKVL 441 (494)
Q Consensus 432 ~~i~~l~~~~ 441 (494)
+.++.|++++
T Consensus 366 ~i~~~i~~~~ 375 (376)
T TIGR02379 366 RVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHh
Confidence 8888887753
No 191
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.86 E-value=5.7e-20 Score=183.34 Aligned_cols=290 Identities=16% Similarity=0.115 Sum_probs=194.0
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH
Q 011057 90 YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK 169 (494)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (494)
.|....+|++ ||++.|.+. +++++||++|+..++.++... +++|+++++.|.....
T Consensus 49 nPt~~~lE~~----lA~l~g~~~-------~~~~~sG~~Ai~~al~all~~-------------GD~Vl~~~~~y~~t~~ 104 (377)
T TIGR01324 49 TLTHFALQDA----MCELEGGAG-------CYLYPSGLAAVTNSILAFVKA-------------GDHVLMVDSAYEPTRY 104 (377)
T ss_pred CccHHHHHHH----HHHHhCCCc-------EEEECcHHHHHHHHHHHhcCC-------------CCEEEEcCCCcHHHHH
Confidence 3555565555 899999864 888999999999888776321 2689888888866554
Q ss_pred H----HHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 011057 170 F----ARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDA 245 (494)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (494)
. +...|++++.++.. +.++++++++++|++|++.+++|++|.+.|+++|+++|+++ +++++||+
T Consensus 105 ~~~~~~~~~gi~v~~~d~~------~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~------g~~livD~ 172 (377)
T TIGR01324 105 FCDIVLKRMGVDITYYDPL------IGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNP------GIVIMIDN 172 (377)
T ss_pred HHHHHHHhcCcEEEEECCC------CHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEEC
Confidence 3 35568887776532 22789999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchH
Q 011057 246 ASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSS 323 (494)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~ 323 (494)
+|+.+.. ..+ . ..++|++..+++||++++.+ .|+++. ++..+. .+.. ..+..+ ...++
T Consensus 173 t~a~g~~--~~p-l-----~~gaDivv~S~tK~l~G~~d~~gG~v~~-~~~~~~-~l~~-~~~~~G--------~~l~p- 232 (377)
T TIGR01324 173 TWAAGLL--FKP-L-----EHGVDISIQAGTKYLVGHSDIMIGTVVA-NARTWD-QLRE-HSYLMG--------QMVDA- 232 (377)
T ss_pred CCccccc--cCc-c-----ccCceEEEecCceeccCCCCceEEEEEe-CHHHHH-HHHH-HHHHhC--------CCCCH-
Confidence 9987643 211 1 13799999999999988765 355544 332221 1110 011101 11112
Q ss_pred HHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCCCCCC
Q 011057 324 QVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDNKRHD 387 (494)
Q Consensus 324 ~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~ 387 (494)
...|..++.+ +.+..++++..+++..+.+.|++.|.++ +..+. ...++++|.+++.....
T Consensus 233 --~~a~~~~rgl--~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~ 308 (377)
T TIGR01324 233 --DDAYTTLRGL--RTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQ 308 (377)
T ss_pred --HHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHH
Confidence 3344444433 3455678889999999999999998764 44432 13568999996421123
Q ss_pred HHHHHHHHHhcCceee-----cccc-CC-CC---------CCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 388 EFEVAELLRRFGWIVP-----AYTM-PA-DA---------QHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 388 ~~~l~~~L~~~Gi~v~-----~~~~-~~-~~---------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
...+.+.|.-.++-++ +... |. .. .....+|+|++- |+.+.++++|+++++.
T Consensus 309 ~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGl----E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 309 VHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGL----ENVDDLKADLKAGFEA 376 (377)
T ss_pred HHHHHHhCCcceEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCC----CCHHHHHHHHHHHHhc
Confidence 4567777765443321 1111 00 00 112579999985 7788889999998864
No 192
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.86 E-value=1.3e-19 Score=182.19 Aligned_cols=285 Identities=16% Similarity=0.107 Sum_probs=191.1
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHH----HHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFA----RYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~----~~~ 174 (494)
++++.+|+++|.+. .+++++|+.|+..++.+.... +++|+++.+.|....... ...
T Consensus 65 ~Le~~lA~l~G~~~-------al~~~sG~~Ai~~~l~al~~~-------------Gd~Vv~~~~~y~~~~~~~~~~~~~~ 124 (386)
T PRK06767 65 LFEERMAVLEGGEE-------ALAFGSGMAAISATLIGFLKA-------------GDHIICSNGLYGCTYGFLEVLEEKF 124 (386)
T ss_pred HHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEcCCcHHHHHHHHHHHHhhc
Confidence 34555999999764 677888888888776665321 268999998886544433 334
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|+++..++ ..|++++++++.++|++|++.+++||+|.+.|+++|.++|+++ ++++++|++|+.+..
T Consensus 125 gi~~~~~~------~~d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~------g~~vivD~a~a~~~~-- 190 (386)
T PRK06767 125 MITHSFCD------METEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRN------GLLVIVDNTFCSPYL-- 190 (386)
T ss_pred CeEEEEeC------CCCHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 65555443 2478999999998999999999999999999999999999999 999999999975432
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
..+ . ..++|+++.+++|++.++.. .|+++.+++ .+...........+. .. ..+.+|..+
T Consensus 191 ~~p-l-----~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~-~i~~~~~~~~~~~g~---------~~---~~~~a~l~~ 251 (386)
T PRK06767 191 QRP-L-----ELGCDAVVHSATKYIGGHGDVVAGVTICKTR-ALAEKIRPMRKDIGG---------IM---APFDAWLLL 251 (386)
T ss_pred CCc-h-----hcCCcEEEecCcceecCCCCceeEEEEeChH-HHHHHHHHHHHHhCC---------CC---CHHHHHHHH
Confidence 111 1 13789999999999976544 466665443 221211111011111 11 112234444
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC----------CccEEEEEecCCCCCCHHHHHHHHHhcCcee
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE----------GVPLVAFSLKDNKRHDEFEVAELLRRFGWIV 402 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~----------~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v 402 (494)
+.+ ..+..++++..+++.++.+.|+++|+++.+..|. ..++++|.+++. ..+...+.++|...++.+
T Consensus 252 ~~L--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~-~~~~~~f~~~l~~~~~~~ 328 (386)
T PRK06767 252 RGL--KTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGG-KEETQAFINDLHFITIAV 328 (386)
T ss_pred cCC--CcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCC-HHHHHHHHHhCCccEEec
Confidence 433 3445678888999999999999999888544221 357999998632 234667888887666543
Q ss_pred e-----cc-ccCCC-----C---------CCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 403 P-----AY-TMPAD-----A---------QHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 403 ~-----~~-~~~~~-----~---------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
+ +. ..|.. . -..+.+|+|++- |+.+.+++||+++++.
T Consensus 329 s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 329 SLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALKK 385 (386)
T ss_pred CCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 2 11 11111 0 123589999985 7888899999998874
No 193
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.86 E-value=6.4e-20 Score=183.66 Aligned_cols=284 Identities=14% Similarity=0.099 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH----HHH
Q 011057 97 QNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK----FAR 172 (494)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~----~~~ 172 (494)
.+++++.+++++|.+. ++++++|+.|+.+++. +.. . +++|+++...|.++.. .+.
T Consensus 49 ~~~le~~la~l~g~~~-------~l~~~sG~~al~~~l~-ll~--------~-----Gd~Vl~~~~~y~~~~~~~~~~~~ 107 (378)
T TIGR01329 49 RTALESLLAKLDKADR-------AFAFSSGMAALDVITR-LLN--------N-----GDEIIAGDDLYGGTDRLLTQVVP 107 (378)
T ss_pred HHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHH-HhC--------C-----CCEEEEcCCCchHHHHHHHHHHH
Confidence 3456677999999854 6777888887765443 211 1 2689999888876544 456
Q ss_pred HcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccc
Q 011057 173 YFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIA 252 (494)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~ 252 (494)
..|++++.+++ .|+++++++++++|++|++++++|++|.+.|+++|+++|+++ +++++||++++.+..
T Consensus 108 ~~G~~v~~vd~------~d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~------g~~vivD~a~~~~~~ 175 (378)
T TIGR01329 108 RSGVVVVHVDT------TDLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQ------NALVVVDNTMMSPLL 175 (378)
T ss_pred HcCcEEEEeCC------CCHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHc------CCEEEEECCCccccc
Confidence 67999988874 378999999999999999999999999999999999999999 999999999976432
Q ss_pred cccCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHH
Q 011057 253 PFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYY 330 (494)
Q Consensus 253 ~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~ 330 (494)
.... . .++|++..++|||+++|.+ .|+++++++... +.+....... +.. ......|
T Consensus 176 ---~~~l--~---~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~-~~~~~~~~~~----------G~~--~~~~~a~- 233 (378)
T TIGR01329 176 ---CNPL--E---LGADIVYHSATKFLAGHSDVMAGVLAVKGEEIA-KKVYFLQNST----------GSG--LAPFDCW- 233 (378)
T ss_pred ---CChh--h---cCCcEEEEecceeccCCccceeEEEEeCcHHHH-HHHHHHHHhc----------CCc--CCHHHHH-
Confidence 1111 1 2789999999999998877 788877664321 1111100001 100 1111122
Q ss_pred HHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCCCCCC-HHHHHH
Q 011057 331 QLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDNKRHD-EFEVAE 393 (494)
Q Consensus 331 al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~-~~~l~~ 393 (494)
+...+...+..++++..+++..+.+.|++.+.+. +..+. ...++++|.+.+ .+ ..++.+
T Consensus 234 -l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~---~~~~~~~~~ 309 (378)
T TIGR01329 234 -LLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS---VALSKRLVE 309 (378)
T ss_pred -HHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC---HHHHHHHHH
Confidence 2233445567888889999999999999888653 33321 034699999832 23 668888
Q ss_pred HHHhcCceeeccc------cCCCC--------------CCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 394 LLRRFGWIVPAYT------MPADA--------------QHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 394 ~L~~~Gi~v~~~~------~~~~~--------------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
.|...++.++... .|... -....+|+|++- |+.+.+++||+++++.
T Consensus 310 ~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 310 ATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI----EDVDDLISDLDIAFVT 375 (378)
T ss_pred hCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 8866655442110 11100 013589999985 7888899999998874
No 194
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.86 E-value=1.7e-19 Score=180.51 Aligned_cols=283 Identities=19% Similarity=0.139 Sum_probs=188.6
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHH----HHHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWE----KFARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~----~~~~~~ 174 (494)
++++.+++++|.+. ++++++|++|+..++.++..+ +++|+++...|.... ..++..
T Consensus 44 ~le~~la~l~g~~~-------a~~~~sG~~Ai~~~l~~l~~~-------------gd~Vl~~~~~y~~~~~~~~~~~~~~ 103 (369)
T cd00614 44 ALEKKLAALEGGEA-------ALAFSSGMAAISTVLLALLKA-------------GDHVVASDDLYGGTYRLFERLLPKL 103 (369)
T ss_pred HHHHHHHHHHCCCC-------EEEEcCHHHHHHHHHHHHcCC-------------CCEEEECCCCcchHHHHHHHHHhhc
Confidence 34455999999864 788899999999888877331 257999888886544 345567
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++.+ |++++++++++++++|++.+++||+|.+.|+++|+++|+++ |++++||++|+.+..
T Consensus 104 g~~~~~v~~~------d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~------g~~livD~t~~~~~~-- 169 (369)
T cd00614 104 GIEVTFVDPD------DPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEH------GALLVVDNTFATPYL-- 169 (369)
T ss_pred CeEEEEeCCC------CHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECCCcchhc--
Confidence 8888887642 58899999988899999999999999999999999999999 999999999987542
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
..+ . . .++|+++.+++|++.++.. .|+++.+++... +.+.....+.+ +. .....+|.++
T Consensus 170 ~~~-~--~---~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~-~~l~~~~~~~g---------~~---~~p~~a~~~l 230 (369)
T cd00614 170 QRP-L--E---LGADIVVHSATKYIGGHSDVIAGVVVGSGEALI-QRLRFLRLALG---------TI---LSPFDAWLLL 230 (369)
T ss_pred CCh-h--h---hCCcEEEeccceeccCCCCceEEEEEeCcHHHH-HHHHHHHHhhC---------CC---CCHHHHHHHH
Confidence 111 1 1 2689999999999976542 577766542322 21111111111 11 1223344544
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEe-ecC---------------CCccEEEEEecCCCCCCHHHHHHHHH
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV-SKD---------------EGVPLVAFSLKDNKRHDEFEVAELLR 396 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (494)
+.+ +.+..++++..+++.++.+.|++.++++.+ .+. ...++++|.+++ .......+.+.|.
T Consensus 231 ~~l--~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~-~~~~~~~f~~~l~ 307 (369)
T cd00614 231 RGL--KTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG-GLEAAKKFLNALK 307 (369)
T ss_pred cCC--CCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC-CHHHHHHHHHcCC
Confidence 444 345677888999999999999999876533 331 146799999863 1122344444443
Q ss_pred hcCceee-----c-cccCCC--------------CCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 397 RFGWIVP-----A-YTMPAD--------------AQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 397 ~~Gi~v~-----~-~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
--.+..+ + ...|.. .-....+|+|++- |+.+.++++|++++
T Consensus 308 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 308 LFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred cceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 2111000 0 000110 0113589999985 78888999998876
No 195
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.86 E-value=4.4e-19 Score=180.48 Aligned_cols=356 Identities=12% Similarity=0.018 Sum_probs=217.7
Q ss_pred HHHHHHHHHHhhhhc-CCCCCcccccccCC-ChHHHHHHHHHHhcc-----cCCCCCCChhhHHHHHHHHHHHHHHhCCC
Q 011057 39 KEAAYQIINDELMLD-GNPRLNLASFVTTW-MEPECDKLMMAAINK-----NYVDMDEYPVTTELQNRCVNIIARLFNAP 111 (494)
Q Consensus 39 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~le~~~~~~la~l~g~~ 111 (494)
..++.+.+++....+ +...++++.+.++. ++|.+.+++.+++.. ....|...++..++++.+.+++.+..|.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~ 96 (409)
T PRK07590 17 FPEIARRVNAFREANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCD 96 (409)
T ss_pred HHHHHHHHHHHhhhcCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCc
Confidence 344555555443322 23345666666554 356678888877764 23346566788888888888877766665
Q ss_pred CCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCe-----------eEE
Q 011057 112 LEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVE-----------LKE 180 (494)
Q Consensus 112 ~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~-----------v~~ 180 (494)
.+ ...+++|+|+++++.+.+ .+.. .+++|++++++|..+...++..|.. ++.
T Consensus 97 ~~---~~~I~it~Ga~~al~~l~-~~~~-------------~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 159 (409)
T PRK07590 97 IS---ADEIFISDGAKCDTGNIL-DIFG-------------PDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVY 159 (409)
T ss_pred CC---hhhEEECCCHHHHHHHHH-HhcC-------------CCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeE
Confidence 42 245899999999987532 2211 1368999999999999999999987 888
Q ss_pred EeccC-CccccCHHHHHHhhhhCCeEEEEeeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccC
Q 011057 181 VKLSE-GYYVMDPVKAVEMVDENTICVAAILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLY 256 (494)
Q Consensus 181 v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~ 256 (494)
+++++ +++..|.+ .+++++|++++|+||||.+.+ +++|+++|+++ ++++++|++|+.+.. ..
T Consensus 160 v~~~~~~~~~~d~~------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~De~Y~~~~~--~~ 225 (409)
T PRK07590 160 LPCTAENNFVPELP------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKEN------GSLILFDAAYEAFIS--DP 225 (409)
T ss_pred eecccccCCcccCc------ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHc------CeEEEEEccchhhcc--CC
Confidence 98874 33444432 257889999999999999965 56788888999 999999999987532 11
Q ss_pred CcccccccCCC---ceEEEEcCcccC-CcCCceEEEEEeCCCCcccc-----cccccCCCCCCCCCcccccCcchHHHHH
Q 011057 257 PELEWDFRLPL---VKSINVSGHKYG-LVYAGIGWVIWRNKEDLPEE-----LIFHINYLGADQPTFTLNFSKGSSQVIA 327 (494)
Q Consensus 257 ~~~~~~~~~~~---~D~~~~~~hK~l-~~p~g~G~~~~~~~~~~~~~-----~~~~~~y~~~~~~~~~~~~s~~~~~~~a 327 (494)
.....-...++ .-++..++.|.+ .++.++||++..++ .+... ......+.... ...+ . ..+.+.
T Consensus 226 ~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~-li~~~~~~~~~~~~~~~~~~~--~~~~-~---~~s~~~ 298 (409)
T PRK07590 226 SLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKE-LKGKTSDGEGVSLNSLWNRRQ--STKF-N---GVSYIV 298 (409)
T ss_pred CCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCHH-HhhhccccchhhhHHHHHHHH--hhcc-c---CcCHHH
Confidence 10000011111 234456888977 58899999987432 22100 00000000000 0000 0 122334
Q ss_pred HHHHHHHhc---HhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHH-hcCceee
Q 011057 328 QYYQLIRLG---FEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLR-RFGWIVP 403 (494)
Q Consensus 328 ~~~al~~l~---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~ 403 (494)
+.++...+. ...+++..+.+.++++++.+.|++.+ +++..+. ...++.+++++ ..+..++++.|. +.|+.+.
T Consensus 299 q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~~~-g~~f~wi~~~~--~~~~~~~~~~l~~~~gv~v~ 374 (409)
T PRK07590 299 QRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAG-FEVYGGV-NAPYIWVKTPD--GMSSWDFFDKLLQEANVVGT 374 (409)
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC-CceecCC-cceEEEEECCC--CCCHHHHHHHHHHHCCEEEe
Confidence 444444442 33455667777788889999999985 7765432 45566777643 356778888876 5688774
Q ss_pred ccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHH
Q 011057 404 AYTMPADAQHITVLRVVIREDFSRTLAERLVLDITK 439 (494)
Q Consensus 404 ~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~ 439 (494)
...... ..+..++|+++. .+.++++..++.|.+
T Consensus 375 pg~~f~-~~~~~~iRi~~~--~~~~~l~~~l~rl~~ 407 (409)
T PRK07590 375 PGSGFG-PSGEGYFRLSAF--GSRENVLEAMERIKK 407 (409)
T ss_pred ChhHhC-CCCCCEEEEEcc--CCHHHHHHHHHHHHh
Confidence 332211 223468999964 255666555544443
No 196
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=5.2e-19 Score=176.79 Aligned_cols=321 Identities=16% Similarity=0.102 Sum_probs=208.6
Q ss_pred CCCCcccccccC-CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHH
Q 011057 55 NPRLNLASFVTT-WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLA 133 (494)
Q Consensus 55 ~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a 133 (494)
...++|+.+.++ .++|.+.+++.+++.. ...|. .++... +++.+++++++++ ..+++|+|+++++.++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~-~~~~~~----lr~~ia~~~~~~~-----~~I~it~G~~~al~~~ 98 (357)
T PRK14809 30 DDLVKLSSNENPHGPSPAAVEAIREAAER-VHSYP-KASHAD----LTAALADRWDVSP-----EQVWLANGGDGALDYL 98 (357)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHhh-hhcCC-CCCHHH----HHHHHHHHhCCCc-----ceEEECCCHHHHHHHH
Confidence 344555555443 3456777877776643 22332 234444 5556777788765 3589999999999888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEeeCC
Q 011057 134 GLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAILGS 212 (494)
Q Consensus 134 ~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~~~ 212 (494)
+.++.+. +++|++++++|..+...+...|++++.++++. +++.+|.+++++.+ +++++|++++++
T Consensus 99 ~~~~~~~-------------gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~ 164 (357)
T PRK14809 99 ARAMLDP-------------GDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPH 164 (357)
T ss_pred HHHhcCC-------------CCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCC
Confidence 7766321 25899999999888888888999999999863 34778888887765 357899999999
Q ss_pred CCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc-CCCceEEEEcCcccC-CcCCceEEEEE
Q 011057 213 TLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYG-LVYAGIGWVIW 290 (494)
Q Consensus 213 ~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~hK~l-~~p~g~G~~~~ 290 (494)
||||.+.+.+++.++++.+.+ ++++++|++|+.+.. . +.....+. .+.+ ++..++.|.+ +++.++|+++.
T Consensus 165 NPTG~~~s~~~~~~l~~~~~~----~~~iI~De~y~~~~~--~-~~~~~~~~~~~~v-i~~~SfSK~~~~~GlRiG~~~~ 236 (357)
T PRK14809 165 NPTGSEIPLDEVEALAERTDE----ETLVVVDEAYGEFAE--R-PSAVALVEERDDV-AVLRTFSKAYGLAGLRLGYAVV 236 (357)
T ss_pred CCCCcCCCHHHHHHHHHhCcc----CcEEEEechhhhccC--C-chhHHHHhhCCCE-EEEecchhHhcCcchhheeeec
Confidence 999999999998888876521 679999999987542 1 11000111 1223 3445777887 47889999987
Q ss_pred eCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhhCCCeEEeec
Q 011057 291 RNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEKTGRFNIVSK 369 (494)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (494)
.++ .+ ..+... . . . . ..+.+++.+++..+.. +-+++..+...+.++++.+.|.... . +
T Consensus 237 ~~~-~~-~~~~~~---~-~---~----~---~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~----~-~ 295 (357)
T PRK14809 237 PEE-WA-DAYARV---N-T---P----F---AASELACRAGLAALDDDEHVERTVETARWAREYIREELDAPT----W-E 295 (357)
T ss_pred CHH-HH-HHHHHh---C-C---C----C---CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCcc----C-C
Confidence 542 22 211110 0 0 0 0 1123345555555543 3345556666667777888775431 2 2
Q ss_pred CCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 370 DEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 370 ~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
+ ..+++.+.+. +..++.+.|.++|+.+....... ...++|+++. +.++++.+++.|++++
T Consensus 296 ~-~g~f~~~~~~-----~~~~~~~~l~~~gv~v~~g~~f~---~~~~iRls~~---~~~~~~~~l~~L~~~l 355 (357)
T PRK14809 296 S-AGNFVLAEVG-----DASAVAEAAQERGVIVRDCTSFG---LPECIRITCG---TREETERAVEVLNEVL 355 (357)
T ss_pred C-CCCEEEEECC-----CHHHHHHHHHHCCEEEEECccCC---CCCeEEEecC---CHHHHHHHHHHHHHHh
Confidence 2 4566666652 46789999999999886543322 1357999986 4677887777777654
No 197
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.86 E-value=9.5e-19 Score=165.18 Aligned_cols=323 Identities=14% Similarity=0.092 Sum_probs=223.7
Q ss_pred ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA 147 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~ 147 (494)
.+|.+.+++.+.++..-++|. + ...++.+++..|.++-+++... ..++.++.|-.-++.++++++.+.
T Consensus 39 ~pp~i~~Al~~rvdhGvfGY~-~-~~~~~~~ai~~w~~~r~~~~i~---~e~i~~~p~VVpgi~~~I~~~T~~------- 106 (388)
T COG1168 39 TPPEIIEALRERVDHGVFGYP-Y-GSDELYAAIAHWFKQRHQWEIK---PEWIVFVPGVVPGISLAIRALTKP------- 106 (388)
T ss_pred CCHHHHHHHHHHHhcCCCCCC-C-CCHHHHHHHHHHHHHhcCCCCC---cceEEEcCcchHhHHHHHHHhCcC-------
Confidence 468899999999988766665 2 4456778899999999999863 356888889888888888877442
Q ss_pred cCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEecc--CCccccCHHHHHHhhhhC-CeEEEEeeCCCCcccc---cCH
Q 011057 148 EGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS--EGYYVMDPVKAVEMVDEN-TICVAAILGSTLNGEF---EDV 221 (494)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~--~~~~~~d~~~L~~~i~~~-t~~vv~~~~~~~tG~~---~~l 221 (494)
++.|++..+.++.+.++....|-++...|+. ++.+.||.++|++++.+. .+++++|+|+||+|.+ +.|
T Consensus 107 ------gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL 180 (388)
T COG1168 107 ------GDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEEL 180 (388)
T ss_pred ------CCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHH
Confidence 3579999999999999999999999988885 345788999999988765 5899999999999998 779
Q ss_pred HHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-ccc--CCCceEEEEcCcccC-CcCCceEEEEEeCCCCcc
Q 011057 222 KLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFR--LPLVKSINVSGHKYG-LVYAGIGWVIWRNKEDLP 297 (494)
Q Consensus 222 ~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~--~~~~D~~~~~~hK~l-~~p~g~G~~~~~~~~~~~ 297 (494)
.+|.+||++| |+.++.|+.|+..+..-. ..... .+. ....-+...+..|.+ .++..++.+++.++....
T Consensus 181 ~~i~elc~kh------~v~VISDEIHaDlv~~g~-~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~ 253 (388)
T COG1168 181 RKIAELCLRH------GVRVISDEIHADLVLGGH-KHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRA 253 (388)
T ss_pred HHHHHHHHHc------CCEEEeecccccccccCC-CccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHH
Confidence 9999999999 999999999987653110 11110 111 112233344556755 556677888887765422
Q ss_pred cccccccCCCCCCCCCcccccCcchHHHHHHHHHHHH--hcHhHHHHHHHHHHHHHHHHHHHHhh-CCCeEEeecCCCcc
Q 011057 298 EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIR--LGFEGYRNVMENCHENAMVLKEGLEK-TGRFNIVSKDEGVP 374 (494)
Q Consensus 298 ~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~--l~~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~~~~ 374 (494)
... ........ + ..+.++..+...+ -|.+.+.+..+.+..+.+++.+.|.+ +|++++..+. .+=
T Consensus 254 ~~~-~~l~~~~~--------~---~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~-gTY 320 (388)
T COG1168 254 KFL-KRLKRNGL--------H---GPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQ-GTY 320 (388)
T ss_pred HHH-HHHHHhcC--------C---CCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCC-Cce
Confidence 111 11111111 1 1233333333333 36778889999999999999999977 5778887664 344
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHH
Q 011057 375 LVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAE 431 (494)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id 431 (494)
+..+.+.. -+++..++.+.|.++..+...........|.+++|+-+.. ++.-++
T Consensus 321 L~WLD~r~-l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac--pr~~L~ 374 (388)
T COG1168 321 LAWLDCRE-LGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC--PRAILE 374 (388)
T ss_pred eeeeeccc-cCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC--CHHHHH
Confidence 44555543 3566678999888776654322222234567899998763 444443
No 198
>PLN02242 methionine gamma-lyase
Probab=99.86 E-value=9.9e-20 Score=183.91 Aligned_cols=287 Identities=14% Similarity=0.036 Sum_probs=192.1
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHH-----HH
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFA-----RY 173 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~-----~~ 173 (494)
++++.+|+++|.+. +++++||++|+..++.++... +++|+++.+.|..+...+ +.
T Consensus 80 ~LE~~lA~l~g~~~-------~l~~~sG~~Ai~~al~al~~~-------------GD~Vl~~~~~Y~~~~~~~~~~~~~~ 139 (418)
T PLN02242 80 NLGRQMAALEGTEA-------AYCTASGMSAISSVLLQLCSS-------------GGHVVASNTLYGGTHALLAHFLPRK 139 (418)
T ss_pred HHHHHHHHHhCCCe-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEcCCcHHHHHHHHHHhhhhc
Confidence 34555999999975 778999999999888777431 268999998877665543 34
Q ss_pred cCCeeEEEeccCCccccCHHHHHHhhhh-CCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccc
Q 011057 174 FEVELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIA 252 (494)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~ 252 (494)
.|++++.++. .|++++++++++ +|++|++.+++||||.+.|+++|+++|+++ ++++++|++|+.+..
T Consensus 140 ~G~~~~~~d~------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~------gi~livDea~~~~~~ 207 (418)
T PLN02242 140 CNITTTFVDI------TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEK------GVTVVVDNTFAPMVL 207 (418)
T ss_pred cCceEEEcCC------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHh------CCEEEEECCCCccCC
Confidence 6777766653 378999999988 499999999999999999999999999999 999999999965421
Q ss_pred cccCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHH
Q 011057 253 PFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYY 330 (494)
Q Consensus 253 ~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~ 330 (494)
.+ . . .++|++..+++|++.++.. .|+++. ++..+......... . ....+. ...++.+
T Consensus 208 ---~~-~--~---~g~divv~S~SK~l~g~g~~~gG~iv~-~~~li~~l~~~~~~----~---~~~~g~----~~~~~~A 266 (418)
T PLN02242 208 ---SP-A--R---LGADVVVHSISKFISGGADIIAGAVCG-PAELVNSMMDLHHG----A---LMLLGP----TMNPKVA 266 (418)
T ss_pred ---CH-H--H---cCCcEEEEeCccccCCCCCceEEEEEc-CHHHHHHHHHHhhh----h---hhccCC----CCCHHHH
Confidence 11 1 1 2589999999999866543 366653 33332211111100 0 000111 1222444
Q ss_pred HHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC------------------CCccEEEEEecCCCCCCHHHHH
Q 011057 331 QLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKD------------------EGVPLVAFSLKDNKRHDEFEVA 392 (494)
Q Consensus 331 al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~------------------~~~~~v~f~~~~~~~~~~~~l~ 392 (494)
++...+...+..++++..+++.++.+.|++++ +++..+. ...++++|.+.+ ......+.
T Consensus 267 ~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~-~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~--~~~~~~f~ 343 (418)
T PLN02242 267 FELSERLPHLSLRMKEHCRRAMEYAKRMKELG-LKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDT--EERANRLM 343 (418)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC-CEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECC--HHHHHHHH
Confidence 44445555667788899999999999999996 7877553 124688999843 11245666
Q ss_pred HHHHhc----Cceee-----c-cccCCC--------------CCCceEEEEEeccCCChHH-HHHHHHHHHHHHHHHh
Q 011057 393 ELLRRF----GWIVP-----A-YTMPAD--------------AQHITVLRVVIREDFSRTL-AERLVLDITKVLHELD 445 (494)
Q Consensus 393 ~~L~~~----Gi~v~-----~-~~~~~~--------------~~~~~~lRvs~~~~~t~~~-id~~i~~l~~~~~~l~ 445 (494)
++|.-- .+.++ + ...|.. .-..+.+|+|++. |+ .|.++++|+++++.++
T Consensus 344 ~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~~dli~dl~~al~~~~ 417 (418)
T PLN02242 344 RYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGY----TGTLEQRWSQFEKALSAMK 417 (418)
T ss_pred HHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHhh
Confidence 666521 11110 0 001100 0113579999985 64 8889999999998875
No 199
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.86 E-value=2.3e-19 Score=180.39 Aligned_cols=286 Identities=21% Similarity=0.152 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHH----HHHH
Q 011057 97 QNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWE----KFAR 172 (494)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~----~~~~ 172 (494)
.+++++.+++++|.+. +++|+||++|+..++.++... +++||++...|.+.. ..+.
T Consensus 63 ~~~le~~la~l~g~~~-------~v~~ssG~~Ai~~al~al~~~-------------Gd~Vi~~~~~y~~t~~~~~~~~~ 122 (390)
T PRK08133 63 VTMFQERLAALEGAEA-------CVATASGMAAILAVVMALLQA-------------GDHVVSSRSLFGSTVSLFEKIFA 122 (390)
T ss_pred HHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEccCcchhHHHHHHHHHH
Confidence 3456677999999864 788999999999887766321 258999888886433 4566
Q ss_pred HcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccc
Q 011057 173 YFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIA 252 (494)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~ 252 (494)
..|++++.++++ |+++++++++++|++|++.+++||+|.+.|+++|.++|+++ ++++++|++++.+..
T Consensus 123 ~~G~~v~~vd~~------d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~------gi~livD~t~~~~~~ 190 (390)
T PRK08133 123 RFGIETTFVDLT------DLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAA------GALLVVDNCFCTPAL 190 (390)
T ss_pred HcCcEEEEECCC------CHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHc------CCEEEEECCCccccc
Confidence 789999888753 67899999999999999999999999999999999999999 999999999876432
Q ss_pred cccCCcccccccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 253 PFLYPELEWDFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 253 ~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
..+ . . .++|+++.+++|+++++. .+|++++.++..+.... .+.... +. ......+|.+
T Consensus 191 --~~p-l--~---~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~----~~~~~~-------g~--~~~~~~a~~~ 249 (390)
T PRK08133 191 --QQP-L--K---LGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVF----GFLRTA-------GP--TLSPFNAWVF 249 (390)
T ss_pred --CCc-h--h---hCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHH----HHHHHh-------CC--CCCHHHHHHH
Confidence 111 1 1 267999999999986653 34444444433221110 011000 11 1122234444
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC----------------CccEEEEEecCCCCCCHHHHHHHH
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE----------------GVPLVAFSLKDNKRHDEFEVAELL 395 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~~~~~~~~~l~~~L 395 (494)
++ +.+.+..++++..+++.++.+.|++.++++.+.-|. ..++++|.+++. ......+.+.|
T Consensus 250 l~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~-~~~~~~f~~~l 326 (390)
T PRK08133 250 LK--GLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGG-REAAWRVIDAT 326 (390)
T ss_pred Hc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCC-HHHHHHHHHhC
Confidence 43 445677888888899999999999998776433221 245899998531 11233455544
Q ss_pred HhcCceee------ccccCCC-----C---------CCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 396 RRFGWIVP------AYTMPAD-----A---------QHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 396 ~~~Gi~v~------~~~~~~~-----~---------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
.--.+.++ ....|.. . -..+.+|+|++- |+.|.++++|+++++
T Consensus 327 ~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 389 (390)
T PRK08133 327 RLISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGL----EDVADIKADLARGLA 389 (390)
T ss_pred CcceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHhh
Confidence 32111110 0001110 0 113589999985 778888999998875
No 200
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.86 E-value=2.6e-19 Score=184.14 Aligned_cols=315 Identities=12% Similarity=0.067 Sum_probs=203.6
Q ss_pred CCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchH
Q 011057 87 MDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVC 166 (494)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s 166 (494)
|....+..++++.+.+++.+.+|.+..- +...+++|+|+++++.+.+.++.+. ++.|+++.++|..
T Consensus 82 Y~~~~G~~~LR~aiA~~l~~~~~~~~~v-~~~~Iiit~Ga~~al~~l~~~l~~p-------------Gd~Vlv~~P~Y~~ 147 (468)
T PLN02450 82 FQDYHGLPAFKNALAEFMSEIRGNKVTF-DPNKLVLTAGATSANETLMFCLAEP-------------GDAFLLPTPYYPG 147 (468)
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCCc-ChHHeEEccChHHHHHHHHHHhCCC-------------CCEEEECCCCCCc
Confidence 4445577788888888888776633110 1245899999999998887776331 3689999999998
Q ss_pred HHHHHH-HcCCeeEEEecc-CCccccCHHHHHHhhhh------CCeEEEEeeCCCCcccccC---HHHHHHHHHHhhccc
Q 011057 167 WEKFAR-YFEVELKEVKLS-EGYYVMDPVKAVEMVDE------NTICVAAILGSTLNGEFED---VKLLNDLLAEKNKET 235 (494)
Q Consensus 167 ~~~~~~-~~G~~v~~v~~~-~~~~~~d~~~L~~~i~~------~t~~vv~~~~~~~tG~~~~---l~~I~~la~~~~~~~ 235 (494)
+...+. ..|++++.|+++ ++++.+|++++++++.+ ++++|++++|+||||.+.+ +++|.++|+++
T Consensus 148 ~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~---- 223 (468)
T PLN02450 148 FDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAK---- 223 (468)
T ss_pred hHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHC----
Confidence 888777 589999999986 34578899999988864 6788999999999999965 56778888899
Q ss_pred CCCceEEEecccccccccccCCccc--ccc----------cCCCceEEEEcCcccC-CcCCceEEEEEeCCCCccccccc
Q 011057 236 GWDTPIHVDAASGGFIAPFLYPELE--WDF----------RLPLVKSINVSGHKYG-LVYAGIGWVIWRNKEDLPEELIF 302 (494)
Q Consensus 236 ~~~~~l~vD~a~~~~~~~~~~~~~~--~~~----------~~~~~D~~~~~~hK~l-~~p~g~G~~~~~~~~~~~~~~~~ 302 (494)
++++++|++|+.+.. ..+... ... ..+++ .+..++.|.+ +++.++|+++..++... ..+..
T Consensus 224 --~~~iI~DE~Y~~~~f--~~~~~~s~l~~~~~~~~~~~~~~~~v-i~l~S~SK~~~l~GlRiG~li~~~~~l~-~~~~~ 297 (468)
T PLN02450 224 --NIHLISDEIYSGTVF--DSPGFVSVMEVLKDRKLENTDVSNRV-HIVYSLSKDLGLPGFRVGAIYSNDEMVV-SAATK 297 (468)
T ss_pred --CcEEEEEcccccccc--CCCCcccHHHHhhhcccccCCCCCcE-EEEEeccccCCCCCccEEEEEECCHHHH-HHHHH
Confidence 999999999986432 111100 000 01123 3455777866 58999999987543222 11111
Q ss_pred ccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHh-----HHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCcc-EE
Q 011057 303 HINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFE-----GYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVP-LV 376 (494)
Q Consensus 303 ~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~-----g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~-~v 376 (494)
...+ +. .+.+.+.++..++... .+++..+++.+.++.+.+.|++++ +.+..+ ..+ ++
T Consensus 298 ~~~~-----------~~---~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~g-i~~~~~--~~g~fl 360 (468)
T PLN02450 298 MSSF-----------GL---VSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAG-IKCLKS--NAGLFC 360 (468)
T ss_pred Hhhc-----------CC---CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCC--CceEEE
Confidence 1111 00 1223455555555432 345667778888889999999985 765443 345 55
Q ss_pred EEEecCC---CCC-CHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 377 AFSLKDN---KRH-DEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 377 ~f~~~~~---~~~-~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
.++++.. ... ...++.++|. +.|+.+....... ..+.+++|++++. .+.++++..++.|+++++..
T Consensus 361 wi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~-~~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~ 431 (468)
T PLN02450 361 WVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCH-CTEPGWFRVCFAN-MSEETLDLAMKRLKSFVESD 431 (468)
T ss_pred EEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccC-CCCCCEEEEEecC-CCHHHHHHHHHHHHHHHHhc
Confidence 5555321 011 1245666665 5799875432211 1234689999984 34677777666666665543
No 201
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.86 E-value=6.9e-20 Score=165.93 Aligned_cols=315 Identities=18% Similarity=0.148 Sum_probs=216.1
Q ss_pred CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
-|..++.+++.++.-. -..|+..|.+..||++ .|+++|-+. ++|.++||++|++++++-...
T Consensus 33 ~PTdeMr~am~eA~vg-DdVyGeD~tt~rLE~~----vA~l~GKEA-------gLFv~SGTmgNllaIm~Hc~~------ 94 (384)
T KOG1368|consen 33 VPTDEMRRAMAEASVG-DDVYGEDPTTNRLEQR----VAELFGKEA-------GLFVPSGTMGNLLAIMVHCHQ------ 94 (384)
T ss_pred CChHHHHHHHhhcccC-cccccCCccHHHHHHH----HHHHhCccc-------eeeecccccccHHHHHHHhcC------
Confidence 3445677776655432 2336778888888877 899999976 999999999999999887542
Q ss_pred hcCCCCCCCeEEeCCCcchH-HHH--HHHHcCCeeEEEeccCCccccCHHHHHHhhhh--------CCeEEEEeeCCCCc
Q 011057 147 AEGKPFDKPNIVTGANVQVC-WEK--FARYFEVELKEVKLSEGYYVMDPVKAVEMVDE--------NTICVAAILGSTLN 215 (494)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~s-~~~--~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~--------~t~~vv~~~~~~~t 215 (494)
.+.+||+.+.+|.- |+. .+.+.|+.++.+...++ +.||++++++++.. -|++|++-+-.+.+
T Consensus 95 ------rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~d-gtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~ 167 (384)
T KOG1368|consen 95 ------RGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNEND-GTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNC 167 (384)
T ss_pred ------CCceEEeccchheeehhccChhhhccceeEeeeeCCC-CeeeHHHHHHhhcCCCCCccCCCceEEEeecccccc
Confidence 12489999999954 333 35566888888877665 79999999999973 26778776666666
Q ss_pred c-cccCHH---HHHHHHHHhhcccCCCceEEEecccccccc-cccCCcccccccCCCceEEEEcCcccCCcCCceEEEEE
Q 011057 216 G-EFEDVK---LLNDLLAEKNKETGWDTPIHVDAASGGFIA-PFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIW 290 (494)
Q Consensus 216 G-~~~~l~---~I~~la~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~ 290 (494)
| ...|++ +|.++|+++ ++.+|.|||--.-.. ....+- .--...+||+++++.|.+.+|.|+ +++
T Consensus 168 Gg~vlPle~~~~v~~lak~~------glkLH~DGARi~NAavasgV~v---k~i~~~fDSVsiCLSKglgAPVGS--ViV 236 (384)
T KOG1368|consen 168 GGKVLPLEELDRVKALAKRH------GLKLHMDGARIFNAAVASGVPV---KKICSAFDSVSICLSKGLGAPVGS--VIV 236 (384)
T ss_pred CceEeeHHHHHHHHHHHhcc------CCeeecchhhhhhHHHHcCCCH---HHHHHhhhhhhhhhhccCCCCccc--EEE
Confidence 6 777765 577789999 999999998643221 001110 111235899999999999999875 455
Q ss_pred eCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC
Q 011057 291 RNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKD 370 (494)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 370 (494)
.++.++......+.. +++ |.|. ..++ +.++|-.+... + ...++-++.++.+.+.+...+++++-.+.
T Consensus 237 G~k~FI~kA~~~RKa-lGG--------GmRQ-sGvL-aaaaLval~~~-~-~~L~~dHk~A~~lAe~~~~~~~i~v~v~a 303 (384)
T KOG1368|consen 237 GSKDFIDKARHFRKA-LGG--------GMRQ-SGVL-AAAALVALDEN-V-PLLRADHKRAKELAEYINTPEEIRVEVPA 303 (384)
T ss_pred ccHHHHHHHHHHHHH-hcC--------chhH-HHHH-HHHHHHHhhcc-h-HHHHHHHHHHHHHHHHhccccceeeecch
Confidence 555444333222222 222 2221 2222 22333333322 2 35677788889999999888878876654
Q ss_pred CCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 371 EGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 371 ~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
...+++.+.+. ...++.+.+++.+.+.|+.+-.. ....+|++++...|.++++..+..+.
T Consensus 304 ~etNiv~~~l~-q~~~~~~~l~~~~~k~gi~lm~~-------~s~r~Rivlh~Qvt~~~ve~~~~~~~ 363 (384)
T KOG1368|consen 304 VETNIVNMVLC-QARLTAEELCKFLEKNGILLMGG-------ASRRIRIVLHHQVTDEDVEYVKSVLS 363 (384)
T ss_pred hhcceeeeecc-cccCCHHHHHHHHHHCCeEEeec-------cccceEEEEEEecCHHHHHHHHHHHH
Confidence 46788877664 34688999999999999986321 12349999999999999988888774
No 202
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=3.9e-19 Score=178.02 Aligned_cols=288 Identities=17% Similarity=0.072 Sum_probs=192.4
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHH----HHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKF----ARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~----~~~~ 174 (494)
.++++||++.|.+. +++++||++|+.+++.+.... +++|+++.+.|...... +...
T Consensus 56 ~L~~~lA~l~g~~~-------~i~~~sg~~Ai~~~l~~l~~~-------------GD~Vl~~~~~y~~~~~~~~~~~~~~ 115 (386)
T PRK08045 56 VVQRALAELEGGAG-------AVLTNTGMSAIHLVTTVFLKP-------------GDLLVAPHDCYGGSYRLFDSLAKRG 115 (386)
T ss_pred HHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHHcCC-------------CCEEEEcCCCcHHHHHHHHHHHhhC
Confidence 35566999998643 889999999998887766331 26899999988753332 2223
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|+++..++ ..|++++++++.++|++|++++++||||.+.|+++|.++|+++ +++++||++|+.+..
T Consensus 116 gi~v~~vd------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~------g~~vivDeay~~~~~-- 181 (386)
T PRK08045 116 CYRVLFVD------QGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREA------GAVSVVDNTFLSPAL-- 181 (386)
T ss_pred CeEEEEeC------CCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHc------CCEEEEECCCCcccc--
Confidence 44555543 2688999999998999999999999999999999999999999 999999999987532
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
..+ .+ .++|++..+++||++++.+ .|+++++++... ..+.....+++. ....+..|.++
T Consensus 182 ~~p---l~---~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~-~~l~~~~~~~g~------------~~~p~~~~l~~ 242 (386)
T PRK08045 182 QNP---LA---LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVV-TELAWWANNIGV------------TGGAFDSYLLL 242 (386)
T ss_pred CCc---hh---hCCCEEEeecceeccCCCCceeEEEEeCcHHHH-HHHHHHHHhcCC------------CCCHHHHHHHH
Confidence 111 11 2689999999999987776 476665554322 211111111111 12234455555
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCCCCCCHHHHHHHHH
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDNKRHDEFEVAELLR 396 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (494)
+.+. .+..++++..+++..+.+.|++.|.++ +..+. ...++++|.+++. ......+.+.|.
T Consensus 243 rgl~--tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~-~~~~~~f~~~l~ 319 (386)
T PRK08045 243 RGLR--TLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD-EQTLRRFLGGLS 319 (386)
T ss_pred hhhc--cHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCc-HHHHHHHHHhcc
Confidence 5443 477889999999999999999999775 43331 0245899998531 111345555554
Q ss_pred hcCceee-----c-cccCCC--------------CCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 397 RFGWIVP-----A-YTMPAD--------------AQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 397 ~~Gi~v~-----~-~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
--.+..+ + ...|.. .-..+.+|+|++- |+.+.+++||+++++...+
T Consensus 320 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~~~ 385 (386)
T PRK08045 320 LFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI----EDGEDLIADLENGFRAANK 385 (386)
T ss_pred ceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHHHhhc
Confidence 2211110 0 001110 0114689999985 7788899999999986643
No 203
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.85 E-value=8.5e-19 Score=177.89 Aligned_cols=334 Identities=15% Similarity=0.067 Sum_probs=212.5
Q ss_pred cCCCCCccccccc----CCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASFVT----TWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++.. .+.+|.+.+++.+.++........++. ....++.++|++++|.+. ...+.+++||++
T Consensus 41 dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~--~~~~~la~~l~~~~~~~~----~~~v~~~~sgse 114 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFAT--EPQIALAERLVELLGAPE----GGRVFFCNSGAE 114 (398)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCC--HHHHHHHHHHHHhCCCCC----CCEEEEeCchHH
Confidence 5555555554321 233688989888888753221112221 222467788999888541 124899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEe-CCCcchHHHHHHHHcCCe------------eEEEeccCCccccCHHHH
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIVT-GANVQVCWEKFARYFEVE------------LKEVKLSEGYYVMDPVKA 195 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L 195 (494)
|+..++..++.. | +..|+. ....|.....+....|.. +..+| ..|++++
T Consensus 115 a~~~al~~~~~~--------g----~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l 176 (398)
T PRK03244 115 ANEAAFKLARLT--------G----RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVP------YGDVDAL 176 (398)
T ss_pred HHHHHHHHHHHH--------C----CCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeC------CCCHHHH
Confidence 999999887652 1 134544 445665544444443422 22222 1478999
Q ss_pred HHhhhhCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEE
Q 011057 196 VEMVDENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSI 271 (494)
Q Consensus 196 ~~~i~~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~ 271 (494)
++.+.+++++|++..+.+++|.+.| +++|.++|++| |+++++|++|.++.. ..........-...|.+
T Consensus 177 ~~~~~~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~gr--~g~~~~~~~~~~~pDi~ 248 (398)
T PRK03244 177 AAAVDDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRH------GALLVLDEVQTGIGR--TGAWFAHQHDGVTPDVV 248 (398)
T ss_pred HHhhcCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCcc--cchHHhhhhhCCCCCEE
Confidence 9998777888988888899999987 89999999999 999999999976321 11101111111135666
Q ss_pred EEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHH
Q 011057 272 NVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENA 351 (494)
Q Consensus 272 ~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a 351 (494)
++ .|++.++.++|+++.+++ .. +.+. ......++ ..+.....+..++|+.+..+ +..++..++.
T Consensus 249 t~--sK~l~~G~~ig~~~~~~~-~~-~~~~-------~~~~~~t~--~~~~~~~aaa~a~l~~~~~~---~~~~~~~~~~ 312 (398)
T PRK03244 249 TL--AKGLGGGLPIGACLAFGP-AA-DLLT-------PGLHGSTF--GGNPVACAAALAVLDTIASE---GLLENAERLG 312 (398)
T ss_pred EE--chhhhCCcccEEEEEcHH-HH-hhcc-------CCCCcCCC--CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHH
Confidence 55 599887788999988653 21 2111 10011111 22223444455555555443 4567788889
Q ss_pred HHHHHHHhhCCCeEEeec-CCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHH
Q 011057 352 MVLKEGLEKTGRFNIVSK-DEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLA 430 (494)
Q Consensus 352 ~~l~~~L~~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~i 430 (494)
++|++.|++++ +.++.. .....++.+.+... ....+.++|.++|+++... +..++|++.+..++++|+
T Consensus 313 ~~l~~~L~~~~-~~~~~~v~g~g~~~~i~~~~~---~~~~~~~~l~~~Gv~~~~~-------~~~~iR~~p~~~~t~~~i 381 (398)
T PRK03244 313 EQLRAGIEALG-HPLVDHVRGRGLLLGIVLTAP---VAKAVEAAAREAGFLVNAV-------APDVIRLAPPLIITDAQV 381 (398)
T ss_pred HHHHHHHHhcC-CCceeeEeeccEEEEEEEecc---HHHHHHHHHHHCCeEEeec-------CCCEEEEECCCcCCHHHH
Confidence 99999999864 322211 11356777777431 4568999999999987441 235799999888899999
Q ss_pred HHHHHHHHHHHHHHh
Q 011057 431 ERLVLDITKVLHELD 445 (494)
Q Consensus 431 d~~i~~l~~~~~~l~ 445 (494)
+++++.|++++++++
T Consensus 382 ~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 382 DAFVAALPAILDAAA 396 (398)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999987654
No 204
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.85 E-value=5e-19 Score=182.74 Aligned_cols=312 Identities=11% Similarity=0.024 Sum_probs=201.6
Q ss_pred CCCChhhHHHHHHHHHHHHHHhC----CCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCC
Q 011057 87 MDEYPVTTELQNRCVNIIARLFN----APLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGAN 162 (494)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g----~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~ 162 (494)
|..+.|..++++.+.+++.+..| +++ ..+++|+|+++|+.+++.++.+. ++.|+++.+
T Consensus 90 y~~~~G~~~LR~aiA~~l~~~~g~~v~v~p-----e~Ivit~Ga~~al~~l~~~l~~p-------------GD~Vlv~~P 151 (496)
T PLN02376 90 FQDYHGLKKFRQAIAHFMGKARGGKVTFDP-----ERVVMSGGATGANETIMFCLADP-------------GDVFLIPSP 151 (496)
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCcCCh-----hhEEEccchHHHHHHHHHHhCCC-------------CCEEEECCC
Confidence 44556788899999999988877 333 45899999999999888877431 368999999
Q ss_pred cchHHHHHHH-HcCCeeEEEeccC-CccccCHHHHHHhhh------hCCeEEEEeeCCCCcccccC---HHHHHHHHHHh
Q 011057 163 VQVCWEKFAR-YFEVELKEVKLSE-GYYVMDPVKAVEMVD------ENTICVAAILGSTLNGEFED---VKLLNDLLAEK 231 (494)
Q Consensus 163 ~h~s~~~~~~-~~G~~v~~v~~~~-~~~~~d~~~L~~~i~------~~t~~vv~~~~~~~tG~~~~---l~~I~~la~~~ 231 (494)
+|..+...+. ..|++++.|+++. +++.+|++++++++. .++++|++++|+||||.+.+ +++|+++|+++
T Consensus 152 ~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~ 231 (496)
T PLN02376 152 YYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRK 231 (496)
T ss_pred CccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHc
Confidence 9999988777 5899999999963 347899999986642 35788999999999999966 56688889999
Q ss_pred hcccCCCceEEEecccccccccccCCcccc--cc----cCC----CceEEEEcCcccC-CcCCceEEEEEeCCCCccccc
Q 011057 232 NKETGWDTPIHVDAASGGFIAPFLYPELEW--DF----RLP----LVKSINVSGHKYG-LVYAGIGWVIWRNKEDLPEEL 300 (494)
Q Consensus 232 ~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~--~~----~~~----~~D~~~~~~hK~l-~~p~g~G~~~~~~~~~~~~~~ 300 (494)
++++++|++|+.... ..+.... .+ ... ..-.+..++.|.+ +++.++|+++..++... ...
T Consensus 232 ------~i~lI~DEiY~~~~f--~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~-~~~ 302 (496)
T PLN02376 232 ------NIHLVVDEIYAATVF--AGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVV-SCA 302 (496)
T ss_pred ------CCEEEEEcCcccccc--CCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHH-HHH
Confidence 999999999987532 1111100 00 000 1123356888977 58899999987543222 211
Q ss_pred ccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHH-----HHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccE
Q 011057 301 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGY-----RNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPL 375 (494)
Q Consensus 301 ~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~-----~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~ 375 (494)
.....+ +. .+.+.+.++..++....+ ++..+++.+..+.+.+.|++.+ ++++.+. ...+
T Consensus 303 ~~~~~~-----------~~---vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~g-i~~~~~~-aG~f 366 (496)
T PLN02376 303 RKMSSF-----------GL---VSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKAD-IACLTSN-AGLF 366 (496)
T ss_pred HHHhhc-----------CC---CCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCC-ceEE
Confidence 111111 00 123345555555543222 3335556677788889998875 7655442 3345
Q ss_pred EEEEecCC----CCC-CHHHHHHHHHhc-CceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 376 VAFSLKDN----KRH-DEFEVAELLRRF-GWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 376 v~f~~~~~----~~~-~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
+.+.+... ... +..++.+.|.++ |+.+....... ..+.+++|+++.. ...++++..++.|+++++.
T Consensus 367 lwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~-~~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 367 AWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFR-CTEPGWFRICFAN-MDDDTLHVALGRIQDFVSK 438 (496)
T ss_pred EEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccC-CCCCCEEEEEeeC-CCHHHHHHHHHHHHHHHHH
Confidence 55555321 011 235788877764 99875433221 1234689999974 3456666666666665543
No 205
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.85 E-value=5.6e-19 Score=180.30 Aligned_cols=342 Identities=14% Similarity=0.034 Sum_probs=212.6
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASFV----TTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++++.++. -.+.+|.+.+++.+.++.... +....+..+.+.++++.+++++|.+. ..+++++||++
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~-----~~v~~~~sgse 107 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTH-FSLGFFYNEPAVELAELLLALTPEGL-----DKVFFVNSGTE 107 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcC-ccCcccCCHHHHHHHHHHHHhCCCCC-----CEEEEcCcHHH
Confidence 566666555431 123578888888888754321 21111345667778888999998533 34899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEe-CCCcchHHHHHHHHcC------------CeeEEEeccCC-----cccc
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIVT-GANVQVCWEKFARYFE------------VELKEVKLSEG-----YYVM 190 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G------------~~v~~v~~~~~-----~~~~ 190 (494)
|+..++.+++... + ++.|++ ....|.+........+ .++..+|.++. .+..
T Consensus 108 a~~~al~~~~~~~-------~----~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (413)
T cd00610 108 AVEAALKLARAYT-------G----RKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELAD 176 (413)
T ss_pred HHHHHHHHHHHHc-------C----CCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHH
Confidence 9999998886421 1 245655 4456665554444332 23566665521 1345
Q ss_pred CHHHHHHhhhh---CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccc
Q 011057 191 DPVKAVEMVDE---NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF 263 (494)
Q Consensus 191 d~~~L~~~i~~---~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~ 263 (494)
|+++|++.+++ ++++|++...++++|.+.| +++|.++|+++ ++++++|++|+++.- .......+.
T Consensus 177 d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~Dev~~g~g~--~g~~~~~~~ 248 (413)
T cd00610 177 DLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKH------GILLIADEVQTGFGR--TGKMFAFEH 248 (413)
T ss_pred HHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CcchhhHhh
Confidence 89999999876 3455655555556698877 99999999999 999999999986411 111101111
Q ss_pred cCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHH
Q 011057 264 RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNV 343 (494)
Q Consensus 264 ~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~ 343 (494)
.-...|.++++ |++.++.++|+++.++ ..+ +.+. ...+ ......+.+.....++.++++.+.. .+.
T Consensus 249 ~~~~~d~~t~s--K~l~~g~~~g~~~~~~-~~~-~~~~-~~~~------~~~~t~~~~~~~~~a~~a~l~~l~~---~~~ 314 (413)
T cd00610 249 FGVEPDIVTLG--KGLGGGLPLGAVLGRE-EIM-DAFP-AGPG------LHGGTFGGNPLACAAALAVLEVLEE---EGL 314 (413)
T ss_pred cCCCCCeEEEc--ccccCccccEEEEEcH-HHH-Hhhc-cCCC------CCCCCCCcCHHHHHHHHHHHHHHHh---ccH
Confidence 11134666544 9888778899987643 222 2110 0000 0001122233445566667776654 245
Q ss_pred HHHHHHHHHHHHHHHhhCCC-eEEeec-CCCccEEEEEecCCC------CCCHHHHHHHHHhcCceeeccccCCCCCCce
Q 011057 344 MENCHENAMVLKEGLEKTGR-FNIVSK-DEGVPLVAFSLKDNK------RHDEFEVAELLRRFGWIVPAYTMPADAQHIT 415 (494)
Q Consensus 344 ~~~~~~~a~~l~~~L~~~~~-~~~~~~-~~~~~~v~f~~~~~~------~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~ 415 (494)
.++..++.+++++.|+++.. ..+... ....+++.+.+.... ..+...+.+.|.++|+.+.... ..
T Consensus 315 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~-------~~ 387 (413)
T cd00610 315 LENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG-------GN 387 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC-------CC
Confidence 67788888888888887632 122211 124567788775321 1345789999999999874421 35
Q ss_pred EEEEEeccCCChHHHHHHHHHHHHH
Q 011057 416 VLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 416 ~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
.+|++++..+++++++++++.|+++
T Consensus 388 ~lR~~~~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 388 VIRLLPPLIITEEEIDEGLDALDEA 412 (413)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHh
Confidence 6999999889999999999888765
No 206
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=6.2e-19 Score=177.55 Aligned_cols=289 Identities=18% Similarity=0.123 Sum_probs=192.0
Q ss_pred HHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchH----HHHHHHH
Q 011057 98 NRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVC----WEKFARY 173 (494)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~ 173 (494)
+++++.|+++.|.+. .+++++|++|+.+++.++... +++|+++.+.|.. +...++.
T Consensus 63 ~~Le~~lA~l~g~~~-------~v~~~sG~~Ai~~~l~all~p-------------GD~Vvv~~p~Y~~t~~~~~~~~~~ 122 (405)
T PRK08776 63 DLLGEALAELEGGAG-------GVITATGMGAINLVLNALLQP-------------GDTLVVPHDAYGGSWRLFNALAKK 122 (405)
T ss_pred HHHHHHHHHHhCCCc-------eEEEcCHHHHHHHHHHHHhCC-------------CCEEEEccCCchHHHHHHHHHHHh
Confidence 345667999999754 677888899998777766321 2678888888875 4444555
Q ss_pred cCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccccccccc
Q 011057 174 FEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAP 253 (494)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (494)
.|.+++.++. .|+++|+++++++|++|++++++||+|.+.|+++|+++|+++ |+++++|++|+.+..
T Consensus 123 ~g~~v~~v~~------~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~------gi~vIvD~a~a~~~~- 189 (405)
T PRK08776 123 GHFALITADL------TDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKV------GALTVVDNTFLSPAL- 189 (405)
T ss_pred cCcEEEEECC------CCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHc------CCEEEEECCCccccc-
Confidence 6777777653 478999999988999999999999999999999999999999 999999999976431
Q ss_pred ccCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 254 FLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 254 ~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
..+ . . .++|++..|++|+++++.+ .|+++.+++... +.+.....+. +.. .+.+.+|..
T Consensus 190 -~~p-l--~---~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~-~~l~~~~~~~----------g~~--~s~~~a~l~ 249 (405)
T PRK08776 190 -QKP-L--E---FGADLVLHSTTKYINGHSDVVGGAVVARDAELH-QQLVWWANAL----------GLT--GSPFDAFLT 249 (405)
T ss_pred -CCc-c--c---ccCCEEEecCceeecCCCCceEEEEEeCCHHHH-HHHHHHHHhc----------CCC--CCHHHHHHH
Confidence 111 1 1 2789999999999987765 466666554322 2111111111 110 123334444
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCCCCCCHHHHHHHH
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDNKRHDEFEVAELL 395 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L 395 (494)
++ +.+.+..++++..+++..+.+.|++.|.+. +..+. ...++++|.+++. ......|.+.|
T Consensus 250 ~~--gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-~~~~~~f~~~l 326 (405)
T PRK08776 250 LR--GLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGG-EAAVRAFVDGL 326 (405)
T ss_pred Hh--hhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCC-HHHHHHHHHhC
Confidence 43 445567888999999999999999998765 33331 0245899998642 11134455544
Q ss_pred Hhc--Ccee----eccccCCC-----C---------CCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 396 RRF--GWIV----PAYTMPAD-----A---------QHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 396 ~~~--Gi~v----~~~~~~~~-----~---------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
.-- +... +....|.. . -....+|+|++- |++|.++++|+++++.+..
T Consensus 327 ~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~al~~~~~ 393 (405)
T PRK08776 327 RYFTLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGI----ESAEDLLIDLRAGLARAEA 393 (405)
T ss_pred CcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHHHhHH
Confidence 321 1110 00011110 0 113579999985 7888999999999987644
No 207
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.85 E-value=2.9e-19 Score=179.63 Aligned_cols=286 Identities=16% Similarity=0.110 Sum_probs=188.0
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcch----HHHHHHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQV----CWEKFARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~----s~~~~~~~~ 174 (494)
++++.+|+++|.+. .+++++|+.|+.+++.++... +++|+++.+.|. .+...+...
T Consensus 63 ~le~~lA~l~g~~~-------av~~~sG~~Ai~~~l~al~~~-------------Gd~Vi~~~~~y~~t~~~~~~~~~~~ 122 (391)
T TIGR01328 63 NLEGRIAFLEGTEA-------AVATSSGMGAIAATLLTILKA-------------GDHLISDECLYGCTFALLEHALTKF 122 (391)
T ss_pred HHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEecCcchHHHHHHHHHHhcC
Confidence 34555999999875 788999999988777665321 257888888764 344556667
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++++ |+++++++++++|++|++.+++||+|.+.|+++|.++|+++ |+++++|++|+.+..
T Consensus 123 G~~~~~vd~~------d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~------gi~livD~a~a~~~~-- 188 (391)
T TIGR01328 123 GIQVDFINMA------IPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQ------GVKVIVDNTFATPML-- 188 (391)
T ss_pred CeEEEEECCC------CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECCCchhcc--
Confidence 8888888753 78999999999999999999999999999999999999999 999999999986532
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc-eEEEEEeCCCCcccccccc-cCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG-IGWVIWRNKEDLPEELIFH-INYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~G~~~~~~~~~~~~~~~~~-~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
..+ + ..++|+++.+++|++.++.+ .|.+++.+++.+....... ..+. +.. .....+|.++
T Consensus 189 ~~~-----~-~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~----------g~~--l~~~~a~l~l 250 (391)
T TIGR01328 189 TNP-----V-ALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMT----------GSV--ISPFDAWLIL 250 (391)
T ss_pred CCc-----h-hcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCC----------CCC--CCcHHHHHHH
Confidence 111 1 13789999999999976654 2334444443332111111 1111 111 1112233344
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEE-eecC---------------CCccEEEEEecCCCCCCHHHHHHHHH
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNI-VSKD---------------EGVPLVAFSLKDNKRHDEFEVAELLR 396 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~-~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (494)
+ +.+.+..++++..+++.++.+.|++.|+++. ..+. ...++++|.+++. ......+.+.|.
T Consensus 251 ~--~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~-~~~~~~f~~~l~ 327 (391)
T TIGR01328 251 R--GLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGG-FAGAKKLLNNLK 327 (391)
T ss_pred h--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCC-HHHHHHHHHhCC
Confidence 3 3334567788899999999999999988763 3331 0245899998632 112344555443
Q ss_pred hc--Cceee---cc-ccCCCC--------------CCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 397 RF--GWIVP---AY-TMPADA--------------QHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 397 ~~--Gi~v~---~~-~~~~~~--------------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
-- +.... +. ..|... -..+.+|+|++- |+.+.++++|+++++.
T Consensus 328 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 328 LIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL----EDADDLIADLKQALDA 390 (391)
T ss_pred cceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHhh
Confidence 21 11110 00 011100 113579999985 7899999999998875
No 208
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=2.1e-19 Score=180.64 Aligned_cols=282 Identities=16% Similarity=0.136 Sum_probs=185.0
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchH----HHHHHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVC----WEKFARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~ 174 (494)
++++.+|+++|.+. .+++++|+.|+..++. +.. . +++|+++.+.|.+ +...++..
T Consensus 58 ~le~~lA~l~g~~~-------~v~~~sG~~ai~~~l~-~l~--------~-----Gd~Vlv~~~~y~~~~~~~~~~~~~~ 116 (390)
T PRK08064 58 ALEDIIAELEGGTK-------GFAFASGMAAISTAFL-LLS--------K-----GDHVLISEDVYGGTYRMITEVLSRF 116 (390)
T ss_pred HHHHHHHHHhCCCC-------eEEECCHHHHHHHHHH-HhC--------C-----CCEEEEccCccchHHHHHHHHHHHc
Confidence 35556999999864 5566777888766654 211 1 2679999888763 33556778
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++. .|+++++++++++|++|++++++||+|.+.|+++|.++|+++ +++++||++|+.+..
T Consensus 117 G~~v~~v~~------~d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~------g~~vvvD~a~~~~~~-- 182 (390)
T PRK08064 117 GIEHTFVDM------TNLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAI------GCLTFVDNTFLTPLL-- 182 (390)
T ss_pred CCEEEEECC------CCHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHc------CCEEEEECCCCcccc--
Confidence 999999875 268999999999999999999999999999999999999999 999999999987532
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
..+ . + .++|++..++|||+.++.+ .|+++++++............|- ... .....|..+
T Consensus 183 ~~~-~--~---~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g----------~~~---~~~~a~l~~ 243 (390)
T PRK08064 183 QKP-L--D---LGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFG----------AVL---GVQDCWLVL 243 (390)
T ss_pred cCc-h--h---hCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcC----------CCC---CHHHHHHHH
Confidence 111 1 1 2689999999999988877 47777665433211111111110 011 111222222
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCCCCCCHHHHHHHHH
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDNKRHDEFEVAELLR 396 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (494)
.+...+..++++..+++..+.+.|++.+.+. +..+. ...++++|.+.+ ..++.+.+.
T Consensus 244 --~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~-----~~~~~~f~~ 316 (390)
T PRK08064 244 --RGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS-----EEAVRQFVS 316 (390)
T ss_pred --cccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC-----HHHHHHHHH
Confidence 3444466788888999999999999888653 33331 134589999843 234445555
Q ss_pred hcCcee---ecc------ccCC---------C---CC--CceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 397 RFGWIV---PAY------TMPA---------D---AQ--HITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 397 ~~Gi~v---~~~------~~~~---------~---~~--~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
..+++- +.. ..|. . .. ..+.+|+|++. |+++.++++|+++++.++
T Consensus 317 ~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGl----e~~~dli~dl~~Al~~~~ 384 (390)
T PRK08064 317 HVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGL----ENVDDLIADFEQALSYVE 384 (390)
T ss_pred hCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhcc
Confidence 555421 100 0010 0 01 13579999986 455566777777777653
No 209
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=5.6e-19 Score=177.65 Aligned_cols=288 Identities=15% Similarity=0.089 Sum_probs=190.2
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHH----HHHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWE----KFARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~----~~~~~~ 174 (494)
++++.+|++.|.+. .+++++|++|+..++.++... +++|+++.+.|.... ..+...
T Consensus 68 ~le~~lA~l~g~~~-------~i~~ssG~~Ai~~~l~all~~-------------GD~Vi~~~~~y~~~~~~~~~~~~~~ 127 (398)
T PRK08249 68 AFEEKVRILEGAEA-------ATAFSTGMAAISNTLYTFLKP-------------GDRVVSIKDTYGGTNKIFTEFLPRM 127 (398)
T ss_pred HHHHHHHHHhCCCe-------EEEeCChHHHHHHHHHHhcCC-------------CCEEEEcCCchHHHHHHHHHHHhhC
Confidence 45566999999864 678888899998887766321 268999999997643 345667
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++ ..|+++++++++++|++|++.+++||+|.+.|+++|+++|+++ ++++++|++|+.+..
T Consensus 128 Gi~v~~vd------~~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~------gi~livD~t~a~~~~-- 193 (398)
T PRK08249 128 GVDVTLCE------TGDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKV------GALVVVDNTFATPIN-- 193 (398)
T ss_pred CeEEEEcC------CCCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHc------CCEEEEECCcCcccc--
Confidence 88877665 2689999999999999999999999999999999999999999 999999999986432
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc-eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG-IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLI 333 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~ 333 (494)
..+ . ..++|+++.+++|+++++.. .|.+++.++... ..+....... +.. .....+|.+++
T Consensus 194 ~~~-l-----~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~-~~l~~~~~~~----------g~~--~s~~~a~l~l~ 254 (398)
T PRK08249 194 QNP-L-----ALGADLVIHSATKFLSGHADALGGVVCGSKELM-EQVYHYREIN----------GAT--MDPMSAYLILR 254 (398)
T ss_pred CCc-h-----hhCCCEEeccCceecCCCCCceEEEEECCHHHH-HHHHHHHHhc----------CCC--CCHHHHHHHHh
Confidence 111 1 13689999999999976542 444444444322 2111111111 111 12223444443
Q ss_pred HhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCCCCCCHHHHHHHHHh
Q 011057 334 RLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDNKRHDEFEVAELLRR 397 (494)
Q Consensus 334 ~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~~ 397 (494)
+.+.+..++++..+++..+.+.|++.+.++ +..|. ...++++|.+++. ......+.+.|.=
T Consensus 255 --~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~-~~~~~~f~~~l~l 331 (398)
T PRK08249 255 --GMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGG-MDTVKRLLPKLRY 331 (398)
T ss_pred --CcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCC-HHHHHHHHHhCCc
Confidence 344556788888999999999999998776 33332 0245899998642 1123345554432
Q ss_pred --cCcee----eccccCCCC--------------CCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 398 --FGWIV----PAYTMPADA--------------QHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 398 --~Gi~v----~~~~~~~~~--------------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
.+... +....|... -....+|+|++- |+.+.+++||+++++.++.
T Consensus 332 ~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~~~ 396 (398)
T PRK08249 332 AHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGI----EDTEDLIADLEQAFAHLES 396 (398)
T ss_pred ceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHHhhh
Confidence 11110 000111100 113589999985 7888999999999987653
No 210
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.85 E-value=1.5e-18 Score=176.24 Aligned_cols=324 Identities=16% Similarity=0.082 Sum_probs=204.0
Q ss_pred CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
+.+|.+.+++.+.++........++ .....++.+.|++++|.+. ++++++|++|+..++.+++......
T Consensus 57 h~~~~i~~a~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~-------~~~~~SGs~A~e~al~~a~~~~~~~-- 125 (401)
T PRK00854 57 HCHPKILAAMVEQAGRLTLTSRAFR--NDQLAPLYEELAALTGSHK-------VLPMNSGAEAVETAIKAVRKWGYEV-- 125 (401)
T ss_pred CCCHHHHHHHHHHHhhccccccccC--CHHHHHHHHHHHhhCCCCE-------EEEeCCcHHHHHHHHHHHHHHHHhc--
Confidence 4478899999888876432211111 2333456666888888653 8999999999999999987542111
Q ss_pred hcCCCCCCCeE-EeCCCcchHHHHHHHHcC------------CeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCC
Q 011057 147 AEGKPFDKPNI-VTGANVQVCWEKFARYFE------------VELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGST 213 (494)
Q Consensus 147 ~~g~~~~~~~v-i~~~~~h~s~~~~~~~~G------------~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~ 213 (494)
.|.+..+.+| +.+...|.+...+....+ .++..++ ..|+++|++++.+++++|++..+.+
T Consensus 126 -~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~i~~~~~aii~e~~~~ 198 (401)
T PRK00854 126 -KGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP------FGDAEALEAAITPNTVAFLVEPIQG 198 (401)
T ss_pred -cCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCCCeEEEEEccccC
Confidence 1222223444 455566765543332111 1223332 2588999999988899999999999
Q ss_pred CcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccc-ccCCCceEEEEcCcccCCcC-CceEE
Q 011057 214 LNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWD-FRLPLVKSINVSGHKYGLVY-AGIGW 287 (494)
Q Consensus 214 ~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~hK~l~~p-~g~G~ 287 (494)
++|.+.| +++|.++|++| |+++++|++|.++.. .......+ .+. ..|.++++ |++.++ +.+|+
T Consensus 199 ~~G~~~~~~~~l~~l~~l~~~~------gi~lI~DEv~~g~g~--~g~~~~~~~~g~-~~D~~~~~--K~l~gg~~~ig~ 267 (401)
T PRK00854 199 EAGVIIPPAGYFTRVRELCTAN------NVTLILDEIQTGLGR--TGKLLAEEHEGI-EADVTLIG--KALSGGFYPVSA 267 (401)
T ss_pred CCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC--CchHhHHhhcCC-CCCEEEec--ccccCCccCeEE
Confidence 9999986 99999999999 999999999975311 11001111 111 35776654 888665 35787
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Q 011057 288 VIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV 367 (494)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 367 (494)
++.+++ .+ ..+.. .....++ ..+.....+..++|+.+..+ ...++..++.+++.+.|++++ +..+
T Consensus 268 v~~~~~-~~-~~l~~-------~~~~~t~--~~~~~~~aa~~a~L~~l~~~---~~~~~~~~~~~~l~~~L~~~~-~~~~ 332 (401)
T PRK00854 268 VLSNSE-VL-GVLKP-------GQHGSTF--GGNPLACAVARAALKVLTEE---GMIENAAEMGAYFLEGLRSIR-SNIV 332 (401)
T ss_pred EEEcHH-HH-hcccC-------CCCCCCC--CcCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHhhc-cCce
Confidence 776543 22 11110 0011111 11233444455556554432 356778888999999999875 3322
Q ss_pred ec-CCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 368 SK-DEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 368 ~~-~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
.. .....++.+.+.+. ..+..++++.|.++|+.+.. .+...+|++.+..+++++++++++.|++++.
T Consensus 333 ~~~~g~g~~~~i~~~~~-~~~~~~~~~~L~~~GV~v~~-------~~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 333 REVRGRGLMLAVELEPE-AGGARQYCEALKERGLLAKD-------THDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred EEEeccceEEEEEEecC-chhHHHHHHHHHHCCeEEec-------CCCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 11 11345666655332 23567899999999998632 1235799998888899999999999987763
No 211
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.85 E-value=1.1e-18 Score=175.65 Aligned_cols=336 Identities=14% Similarity=0.108 Sum_probs=211.7
Q ss_pred HHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcC
Q 011057 70 PECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEG 149 (494)
Q Consensus 70 p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g 149 (494)
..+.+...+++..+...|..+++..++|++ +++++|.+. +++|+||++|+.+++.++..+
T Consensus 32 ~ams~~~~~a~~~gd~~Y~~~~g~~~Leea----ia~~~g~~~-------vv~t~~Gt~Al~la~~al~~p--------- 91 (431)
T cd00617 32 GAMSDYQWAAMMLGDEAYAGSKSFYDLEDA----VQDLFGFKH-------IIPTHQGRGAENILFSILLKP--------- 91 (431)
T ss_pred HHHHHHHHHHHHhCCCccCCCCCHHHHHHH----HHHHHCCCe-------EEEcCCHHHHHHHHHHHhCCC---------
Confidence 455566566665544457788888887766 788888864 899999999999888776331
Q ss_pred CCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCC---------ccccCHHHHHHhhhhC----CeEEEEeeCCCCc-
Q 011057 150 KPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEG---------YYVMDPVKAVEMVDEN----TICVAAILGSTLN- 215 (494)
Q Consensus 150 ~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~---------~~~~d~~~L~~~i~~~----t~~vv~~~~~~~t- 215 (494)
+++| ++.+.+.++...+.+.|+.++.++++++ .+.+|+++|+++|+++ +++|+++.++|++
T Consensus 92 ----GD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~g 166 (431)
T cd00617 92 ----GRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAG 166 (431)
T ss_pred ----CCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCC
Confidence 2455 5666666777788999999999998732 2459999999999865 6789999999998
Q ss_pred cccc---CHHHHHHHHHHhhcccCCCceEEEecccccccccccC---Ccc----cccc--c-CCCceEEEEcCcccCCcC
Q 011057 216 GEFE---DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLY---PEL----EWDF--R-LPLVKSINVSGHKYGLVY 282 (494)
Q Consensus 216 G~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~---~~~----~~~~--~-~~~~D~~~~~~hK~l~~p 282 (494)
|... ++++|.++|+++ |++||.|+|+..+-.-+.. +.. ..++ . ....|++++++||-++++
T Consensus 167 G~~~s~~~l~~i~eia~~~------gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~ 240 (431)
T cd00617 167 GQPVSMANLREVRELAHKY------GIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVN 240 (431)
T ss_pred CccCCHHHHHHHHHHHHHc------CCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCc
Confidence 7775 567889999999 9999999997542111110 000 0011 0 236899999999988776
Q ss_pred CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC
Q 011057 283 AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTG 362 (494)
Q Consensus 283 ~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~ 362 (494)
.| |+++.+++..... +.. +. .....+...+.-++....++..+|....+ .+..++..+.+++|.++|++.|
T Consensus 241 ~G-G~i~~~d~~l~~~-~~~---~~-~~~~~~~~~gG~~~r~~~A~A~gL~e~~~---~~~l~~~~~~r~~l~~~L~~~G 311 (431)
T cd00617 241 IG-GFLALRDDELYEE-ARQ---RV-VLYEGFVTYGGMAGRDMEALAQGLREAVE---EDYLRHRVEQVRYLGDRLDEAG 311 (431)
T ss_pred cc-eEEEeCcHHHHHH-HHH---hc-cccCCccccccccHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHCC
Confidence 53 5676665433322 111 10 00001110011112233333224432111 2344555567799999999986
Q ss_pred CeEEeecCCCccEEEEEecC------CCCCCHHHHHHHHH-hcCceeecc---ccCCCCC-------CceEEEEEec-cC
Q 011057 363 RFNIVSKDEGVPLVAFSLKD------NKRHDEFEVAELLR-RFGWIVPAY---TMPADAQ-------HITVLRVVIR-ED 424 (494)
Q Consensus 363 ~~~~~~~~~~~~~v~f~~~~------~~~~~~~~l~~~L~-~~Gi~v~~~---~~~~~~~-------~~~~lRvs~~-~~ 424 (494)
+.+..+. ....+.+.+.. ..+.+..+++..|. +.|+.+... ..+.... ....+|+++. .-
T Consensus 312 -~~v~~P~-Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~ 389 (431)
T cd00617 312 -VPIVEPA-GGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRV 389 (431)
T ss_pred -CCccCCC-cceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccc
Confidence 8877654 44455555431 12245778886555 556664321 1121111 2367999984 36
Q ss_pred CChHHHHHHHHHHHHHHHHHhcC
Q 011057 425 FSRTLAERLVLDITKVLHELDSL 447 (494)
Q Consensus 425 ~t~~~id~~i~~l~~~~~~l~~~ 447 (494)
.|.+.+|.+.+.|..+.++-..+
T Consensus 390 ~t~~~~~~~~~~~~~~~~~~~~~ 412 (431)
T cd00617 390 YTQDHMDYVAAAVIALYERREDI 412 (431)
T ss_pred cCHHHHHHHHHHHHHHHhhHhhC
Confidence 78888988888888887776554
No 212
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.85 E-value=1.5e-20 Score=182.30 Aligned_cols=228 Identities=15% Similarity=0.060 Sum_probs=162.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcC
Q 011057 96 LQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFE 175 (494)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G 175 (494)
..+++++.+|+++|.+. ..++|+|+|+++..++.++.. .+++|+++.++|.++..++...|
T Consensus 60 ~i~~~~~~~A~~~ga~~------~~~~~~Gst~a~~~~l~al~~-------------~gd~Vlv~~~~h~s~~~~~~~~g 120 (294)
T cd00615 60 PIKEAQELAARAFGAKH------TFFLVNGTSSSNKAVILAVCG-------------PGDKILIDRNCHKSVINGLVLSG 120 (294)
T ss_pred HHHHHHHHHHHHhCCCC------EEEEcCcHHHHHHHHHHHcCC-------------CCCEEEEeCCchHHHHHHHHHCC
Confidence 34567778999999864 244588999999877776632 13689999999999999999999
Q ss_pred CeeEEEeccCCc-----cccCHHHHHHhhhh--CCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccc
Q 011057 176 VELKEVKLSEGY-----YVMDPVKAVEMVDE--NTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASG 248 (494)
Q Consensus 176 ~~v~~v~~~~~~-----~~~d~~~L~~~i~~--~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~ 248 (494)
++++.++.+.+. +.+|++++++++.+ ++++|+++++ |++|.+.|+++|+++|+++ +++++||+||+
T Consensus 121 ~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~------g~~livDeA~~ 193 (294)
T cd00615 121 AVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHR------GLPVLVDEAHG 193 (294)
T ss_pred CEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhc------CCeEEEECcch
Confidence 999998775321 37999999999974 5788889987 5799999999999999999 99999999998
Q ss_pred cccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHH
Q 011057 249 GFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQ 328 (494)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~ 328 (494)
.... + .+..+......++|+++.++||++.++.+.|++.+++.......+....... ..++++...+.++
T Consensus 194 ~~~~-~-~~~~~~~~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~~~--------~ttsps~~~~asl 263 (294)
T cd00615 194 AHFR-F-HPILPSSAAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALNLH--------QSTSPSYLILASL 263 (294)
T ss_pred hhhc-c-CcccCcchhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHHHH--------CCCCcHHHHHHHH
Confidence 6421 1 1212212223479999999999987777777777665421111111100000 1134444455666
Q ss_pred HHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhh
Q 011057 329 YYQLIRLGFEGYRNVMENCHENAMVLKEGLEK 360 (494)
Q Consensus 329 ~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~ 360 (494)
-.+++.+..+| ++..++..+++++++++|.+
T Consensus 264 ~~a~~~~~~~g-~~~~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 264 DVARAMMALEG-KELVEELIELALYARQEINK 294 (294)
T ss_pred HHHHHHHHHHh-HHHHHHHHHHHHHHHHHHhC
Confidence 67777665555 45678888999999988753
No 213
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=1.7e-19 Score=181.32 Aligned_cols=287 Identities=15% Similarity=0.092 Sum_probs=196.9
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHH----HHHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWE----KFARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~----~~~~~~ 174 (494)
++++.++++.|.+. +++++||++|+.+++.++.++ +++|+++.+.|..+. ..+...
T Consensus 69 ~Le~~lA~l~g~~~-------~l~~~sgt~Ai~~~l~al~~~-------------GD~Vl~~~~~y~~~~~~~~~~~~~~ 128 (394)
T PRK07050 69 ALAQRLAEIEGGRH-------ALLQPSGLAAISLVYFGLVKA-------------GDDVLIPDNAYGPNRDHGEWLARDF 128 (394)
T ss_pred HHHHHHHHHhCCCe-------EEEeccHHHHHHHHHHHHhCC-------------CCEEEEecCCcccHHHHHHHHHHhc
Confidence 45566999999754 899999999999888777331 368999999997654 356778
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++.. +.++++++++++|++|++.+++|++|...++++|+++|+++ ++++++|++|+.+..
T Consensus 129 Gi~v~~vd~~------~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~------gi~livD~a~a~~~~-- 194 (394)
T PRK07050 129 GITVRFYDPL------IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARAR------GVVTAIDNTYSAGLA-- 194 (394)
T ss_pred CeEEEEECCC------CHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHc------CCEEEEECCcccccc--
Confidence 9988887632 44788999999999999999999999999999999999999 999999999987542
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
..+ . + .++|+++.+.+|++.++.+ .|+++++++... ..+.....+.+. . ......|.++
T Consensus 195 ~~~-l--~---~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~-~~~~~~~~~~G~---------~---~~~~~a~l~l 255 (394)
T PRK07050 195 FKP-F--E---HGVDISVQALTKYQSGGSDVLMGATITADAELH-AKLKLARMRLGI---------G---VSADDCSLVL 255 (394)
T ss_pred cCH-H--H---cCCeEEEEECCceecCCCCeeEEEEEECCHHHH-HHHHHHHHhcCC---------C---CCHHHHHHHH
Confidence 221 1 1 2689999999999977665 466666654322 211111111111 1 1223334444
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC----------------CccEEEEEecCC-CCCCHHHHHHHH
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE----------------GVPLVAFSLKDN-KRHDEFEVAELL 395 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~~-~~~~~~~l~~~L 395 (494)
+. ...+..++++..+++.++.+.|++.+.+..+..+. ..+++.|.+.+. ...+..++.+.|
T Consensus 256 r~--l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l 333 (394)
T PRK07050 256 RG--LPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEAL 333 (394)
T ss_pred cC--CCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcC
Confidence 43 33456688888899999999999998765443210 245788888642 112356677777
Q ss_pred HhcCceee-----ccccCCC---------CCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 396 RRFGWIVP-----AYTMPAD---------AQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 396 ~~~Gi~v~-----~~~~~~~---------~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
...++-.+ +...|.. ....+.+|+|++- |+.+.+++||+++++..
T Consensus 334 ~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl----E~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 334 ELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL----EDEADLIADLEQALEAA 392 (394)
T ss_pred CCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc----CCHHHHHHHHHHHHHHh
Confidence 66554321 1111211 0122689999985 77888899999988753
No 214
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=3.5e-19 Score=178.48 Aligned_cols=288 Identities=18% Similarity=0.115 Sum_probs=189.2
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHH
Q 011057 91 PVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKF 170 (494)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~ 170 (494)
|...++| +.+|+++|.+. ++++++|+.|+..++.++... +++|+++.+.|.+....
T Consensus 53 p~~~~lE----~~lA~l~g~~~-------~l~~~sG~~Ai~~~l~~ll~~-------------GD~Vlv~~~~y~~~~~~ 108 (385)
T PRK08574 53 PTLRPLE----EALAKLEGGVD-------ALAFNSGMAAISTLFFSLLKA-------------GDRVVLPMEAYGTTLRL 108 (385)
T ss_pred ccHHHHH----HHHHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEcCCCchhHHHH
Confidence 4555555 55999999864 778899999999887766321 26899999999887665
Q ss_pred H---HHcCCeeEEEeccCCccccCHHHHHHhhhh-CCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecc
Q 011057 171 A---RYFEVELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAA 246 (494)
Q Consensus 171 ~---~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (494)
+ ...|++++.+. +|++++++++++ +|++|++.+++||+|.+.|+++|+++|+++ ++++++|++
T Consensus 109 ~~~~~~~g~~v~~~~-------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~------gi~livD~t 175 (385)
T PRK08574 109 LKSLEKFGVKVVLAY-------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKEL------GAILVVDNT 175 (385)
T ss_pred HHHhhccCcEEEEEC-------CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHc------CCEEEEECC
Confidence 5 34476666543 467899999988 899999999999999999999999999999 999999999
Q ss_pred cccccccccCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHH
Q 011057 247 SGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQ 324 (494)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~ 324 (494)
|+.+.. ..+ .. .++|+++.+++||+.++.+ .|+++++++... ..+.....+.+ .. ..
T Consensus 176 ~a~~~~--~~~-l~-----~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~-~~~~~~~~~~g----------~~--~~ 234 (385)
T PRK08574 176 FATPLL--YRP-LR-----HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFL-EELWEWRRRLG----------TI--MQ 234 (385)
T ss_pred CCcccc--CCh-hh-----hCCcEEEeeCceeecCCCCceeEEEEECcHHHH-HHHHHHHHhcC----------CC--CC
Confidence 976532 111 11 3689999999999987654 355666554322 21111111111 11 11
Q ss_pred HHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC-----------------CCccEEEEEecCCCCC
Q 011057 325 VIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD-----------------EGVPLVAFSLKDNKRH 386 (494)
Q Consensus 325 ~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~-----------------~~~~~v~f~~~~~~~~ 386 (494)
.+..|.+++ +.+.+..++++..+++.++.+.|++.|.++ +..|. ...++++|.+++. ..
T Consensus 235 p~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~-~~ 311 (385)
T PRK08574 235 PFEAYLVLR--GLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGG-RD 311 (385)
T ss_pred HHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCC-HH
Confidence 122333333 334466788888999999999999998765 44332 0245889998531 11
Q ss_pred CHHHHHHHHHhc--Cceee---c-cccCCCC--------------CCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 387 DEFEVAELLRRF--GWIVP---A-YTMPADA--------------QHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 387 ~~~~l~~~L~~~--Gi~v~---~-~~~~~~~--------------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
....+.+.|.=- +.... + ...|... -....+|+|++- |+.+.++++|+++++.
T Consensus 312 ~~~~~~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~al~~ 384 (385)
T PRK08574 312 AVLKFLRSLKLIKPSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGL----EDVEDLIEDLDQALGS 384 (385)
T ss_pred HHHHHHHcCCcceEccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhc
Confidence 234455544321 11110 0 0011110 013579999985 7788899999998864
No 215
>PRK05839 hypothetical protein; Provisional
Probab=99.85 E-value=3.1e-18 Score=172.06 Aligned_cols=335 Identities=14% Similarity=0.017 Sum_probs=206.3
Q ss_pred CCCCCcccccccCC-ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHH
Q 011057 54 GNPRLNLASFVTTW-MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIML 132 (494)
Q Consensus 54 ~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~ 132 (494)
+++.++|..+.++. +++.+.+++.+.... ...|....+..++++.+.+++++.+|.+.+ ...+++|+|+++++..
T Consensus 23 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~---~~~I~it~G~~~al~~ 98 (374)
T PRK05839 23 EYKGLDLTIGEPQFETPKFIQDALKNNAHL-LNKYPKSAGEESLREAQRGFFKRRFKIELK---ENELIPTFGTREVLFN 98 (374)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCC---cceEEEecCcHHHHHH
Confidence 55666666665553 345677777655432 334544557788999999999998885432 2458999999999987
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEeeC
Q 011057 133 AGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAILG 211 (494)
Q Consensus 133 a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~~ 211 (494)
.+.+... ...++.|+++.+++..+...++..|++++.+++++ +++.+|+++.+ + +++++|++++|
T Consensus 99 ~~~~~~~-----------~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP 164 (374)
T PRK05839 99 FPQFVLF-----------DKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSP 164 (374)
T ss_pred HHHHHhc-----------CCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCC
Confidence 7665521 01136799999999999999999999999999974 34666665432 2 46889999999
Q ss_pred CCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCc-ccc-----cccCCCceEEEEcCcc-cCCc
Q 011057 212 STLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPE-LEW-----DFRLPLVKSINVSGHK-YGLV 281 (494)
Q Consensus 212 ~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~-----~~~~~~~D~~~~~~hK-~l~~ 281 (494)
+||||.+.+ +++|.++|+++ |+++++|++|+.+......+. ... ....+++ ++..++.| |+++
T Consensus 165 ~NPTG~~~s~~~l~~i~~~~~~~------~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~v-i~~~SfSK~~~~~ 237 (374)
T PRK05839 165 NNPTGRTLSLEELIEWVKLALKH------DFILINDECYSEIYENTPPPSLLEASILVGNESFKNV-LVINSISKRSSAP 237 (374)
T ss_pred CCCcCcccCHHHHHHHHHHHHHc------CCEEEeccchhhcccCCCCCCHhhhhcccCccccCcE-EEEeccccccCCc
Confidence 999999955 56677778889 999999999987531100000 000 0011233 44567778 4788
Q ss_pred CCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc-HhHHHHHHHHHHHHHHHHHHHHhh
Q 011057 282 YAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-FEGYRNVMENCHENAMVLKEGLEK 360 (494)
Q Consensus 282 p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~-~~g~~~~~~~~~~~a~~l~~~L~~ 360 (494)
+.++||++.. +..+ ..+.....+... + .+.+.+.++...+. .+.+++..++..++++++.+.|
T Consensus 238 GlRiG~ii~~-~~~~-~~~~~~~~~~~~--------~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l-- 301 (374)
T PRK05839 238 GLRSGFIAGD-ASIL-KKYKAYRTYLGC--------A----SPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL-- 301 (374)
T ss_pred cceeEEEecC-HHHH-HHHHHHHhhcCC--------C----CChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc--
Confidence 9999999864 2222 221111111110 1 11222333332332 3334555666666666666654
Q ss_pred CCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHh-cCceeeccccCCC-CCCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 361 TGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRR-FGWIVPAYTMPAD-AQHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~-~Gi~v~~~~~~~~-~~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
+ .. .++...++.++++ +..+++++|.+ +|+.+........ ..+..++|+++.. +.+++...++.|+
T Consensus 302 -~-~~---~p~gg~fi~~~~~-----~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~~~l~~l~ 369 (374)
T PRK05839 302 -G-IT---IPPATFYVWLPVD-----NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY--DTPKLEKALEIIK 369 (374)
T ss_pred -C-CC---CCCeeEEEEEeCC-----ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 2 22 2324455666653 34688888865 9998754322211 1134689999963 4666666666665
Q ss_pred HHH
Q 011057 439 KVL 441 (494)
Q Consensus 439 ~~~ 441 (494)
+++
T Consensus 370 ~~l 372 (374)
T PRK05839 370 TYL 372 (374)
T ss_pred HHh
Confidence 554
No 216
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=7.2e-19 Score=176.67 Aligned_cols=283 Identities=17% Similarity=0.078 Sum_probs=186.2
Q ss_pred HHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHH----HHcC
Q 011057 100 CVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFA----RYFE 175 (494)
Q Consensus 100 ~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~----~~~G 175 (494)
+++.+|++.|.+. .+.+++|++|+.+++.++... +++|+++.+.|....... ...|
T Consensus 66 Le~~lA~~~g~~~-------~i~~~sG~~Ai~~~l~all~~-------------Gd~Vl~~~~~y~~t~~~~~~~~~~~g 125 (388)
T PRK07811 66 LEEQLAALEGGAY-------GRAFSSGMAATDCLLRAVLRP-------------GDHIVIPNDAYGGTFRLIDKVFTRWG 125 (388)
T ss_pred HHHHHHHHhCCCc-------eEEeCCHHHHHHHHHHHHhCC-------------CCEEEEcCCCchHHHHHHHHhCcCCC
Confidence 4555999999875 566778899999888777331 268999999887543332 2246
Q ss_pred CeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccccccccccc
Q 011057 176 VELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL 255 (494)
Q Consensus 176 ~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (494)
++++.++. .|+++++++++++|++|++..++||+|.+.|+++|+++|+++ ++++++|++|+.+.. .
T Consensus 126 i~~~~~d~------~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~------gi~lIvD~a~a~~~~--~ 191 (388)
T PRK07811 126 VEYTPVDL------SDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDA------GAKVVVDNTFASPYL--Q 191 (388)
T ss_pred eEEEEeCC------CCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHc------CCEEEEECCCCcccc--C
Confidence 66666652 588999999999999999999999999999999999999999 999999999987532 1
Q ss_pred CCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHH
Q 011057 256 YPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLI 333 (494)
Q Consensus 256 ~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~ 333 (494)
.+ +. .++|+++.+++||+.++.+ .|+++++++... ..+.....+.+. . ......|.+++
T Consensus 192 ~p-----~~-~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~-~~~~~~~~~~g~---------~---~s~~~a~l~~~ 252 (388)
T PRK07811 192 QP-----LA-LGADVVVHSTTKYIGGHSDVVGGALVTNDEELD-EAFAFLQNGAGA---------V---PGPFDAYLTLR 252 (388)
T ss_pred Cc-----hh-hCCcEEEecCceeecCCCCcEEEEEEECCHHHH-HHHHHHHHhcCC---------C---CCHHHHHHHHh
Confidence 11 11 2689999999999987654 577776654322 211111111111 0 11222343343
Q ss_pred HhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecCC---------------CccEEEEEecCCCCCCHHHHHHHHHh
Q 011057 334 RLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKDE---------------GVPLVAFSLKDNKRHDEFEVAELLRR 397 (494)
Q Consensus 334 ~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~~---------------~~~~v~f~~~~~~~~~~~~l~~~L~~ 397 (494)
.+ +.+..++++..+++..+.+.|++.|+++ +..+.- ..++++|.+++. ......+.+.|.=
T Consensus 253 ~L--~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-~~~~~~f~~~l~~ 329 (388)
T PRK07811 253 GL--KTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGG-EEAARDFCARTKV 329 (388)
T ss_pred cc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCC-HHHHHHHHHhCCc
Confidence 33 3456788888899999999999999876 333320 245899999642 1123445554432
Q ss_pred c--Cceee---c-cccCCCC-----------CCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 398 F--GWIVP---A-YTMPADA-----------QHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 398 ~--Gi~v~---~-~~~~~~~-----------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
- +.... + ...|... -....+|+|++- |+.+.++++|+++++
T Consensus 330 ~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 387 (388)
T PRK07811 330 FTLAESLGGVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI----EDVADLLADLEQALG 387 (388)
T ss_pred ceeeccCCCCcceEeCCcccCcccCCHhhcCCCCCEEEEEeCC----CCHHHHHHHHHHHhh
Confidence 1 11100 0 0111100 114589999985 778888999988875
No 217
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=4.6e-19 Score=176.18 Aligned_cols=294 Identities=15% Similarity=0.092 Sum_probs=196.1
Q ss_pred CChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHH
Q 011057 89 EYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWE 168 (494)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~ 168 (494)
..|....+|+. |+++-|.+. ++++++|+.|+..++.++.+. +++||++...|..+.
T Consensus 60 ~nPt~~~le~~----la~LEg~~~-------a~~~~SGmaAi~~~~~~ll~~-------------GD~Vv~~~~~Yg~t~ 115 (395)
T PRK08114 60 GTLTHFSLQEA----MCELEGGAG-------CALYPCGAAAVANAILAFVEQ-------------GDHVLMTGTAYEPTQ 115 (395)
T ss_pred CChhHHHHHHH----HHHHhCCCe-------EEEEhHHHHHHHHHHHHHcCC-------------CCEEEEeCCCcHHHH
Confidence 44666666655 888888764 788888999999888776321 268999888887665
Q ss_pred HHH----HHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 011057 169 KFA----RYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVD 244 (494)
Q Consensus 169 ~~~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (494)
..+ +..|++++.++. .|.++++++++++|++|++.+++|++|.+.||++|+++||++. .+++++||
T Consensus 116 ~l~~~~l~~~Gi~v~~vd~------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g----~g~~lvVD 185 (395)
T PRK08114 116 DFCSKILSKLGVTTTWFDP------LIGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVN----PDAVIMID 185 (395)
T ss_pred HHHHHHHHhcCcEEEEECC------CCHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhC----CCCEEEEE
Confidence 543 557999888863 4678999999999999999999999999999999999999981 14999999
Q ss_pred cccccccccccCCcccccccCCCceEEEEcCcccCCcCC--ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcch
Q 011057 245 AASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYA--GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGS 322 (494)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~--g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~ 322 (494)
++++.+.. ..+ ...++|++..++|||++++. +.|+++. ++... ..+....... |. .
T Consensus 186 nT~a~p~~--~~p------l~~GaDivv~S~tKyl~Ghsdv~~G~v~~-~~~~~-~~l~~~~~~~----------G~--~ 243 (395)
T PRK08114 186 NTWAAGVL--FKA------LDFGIDISIQAGTKYLVGHSDAMIGTAVA-NARCW-EQLRENSYLM----------GQ--M 243 (395)
T ss_pred CCCccccc--cCH------HHcCCcEEEEcCcccccCCCcceeEEEEc-CHHHH-HHHHHHHHhc----------cC--C
Confidence 99987542 111 12389999999999999986 5565543 32211 1111000001 11 1
Q ss_pred HHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCC-CC
Q 011057 323 SQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDN-KR 385 (494)
Q Consensus 323 ~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~-~~ 385 (494)
.+....|. ..-|...+.-++++..+++..+.+.|++.|.++ +..|. ...++++|.+++. ..
T Consensus 244 ~~p~~a~l--~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~ 321 (395)
T PRK08114 244 VDADTAYM--TSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTD 321 (395)
T ss_pred CCHHHHHH--HHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccH
Confidence 22233443 334556677889999999999999999999876 44432 1346999998641 01
Q ss_pred CCHHHHHHHHHhcCceee-----cccc---CCC----------CCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 386 HDEFEVAELLRRFGWIVP-----AYTM---PAD----------AQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 386 ~~~~~l~~~L~~~Gi~v~-----~~~~---~~~----------~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
.....+.+.|.--.+.++ +... |.. ....+.+|+|++. |++|.+++||+++++.+
T Consensus 322 ~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 322 EQLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHIGL----EDVDDLIADLAAGFARI 394 (395)
T ss_pred HHHHHHHHhCCcceeecccCCccceeccCCchhhhccCChhHhcCCCCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 112344444432111110 1110 100 0112689999985 78889999999998754
No 218
>PLN02509 cystathionine beta-lyase
Probab=99.85 E-value=2.4e-19 Score=181.87 Aligned_cols=285 Identities=14% Similarity=0.103 Sum_probs=188.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH----HH
Q 011057 96 LQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK----FA 171 (494)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~----~~ 171 (494)
..++++++++++.|.+. ++++++|+.|+.+.+ .+.. . +++||++.+.|..+.. .+
T Consensus 134 t~~aLE~~lA~leg~e~-------ai~~~SG~aAi~~il-~ll~--------~-----GD~VI~~~~~y~~t~~ll~~~l 192 (464)
T PLN02509 134 TRDALESLLAKLDKADR-------AFCFTSGMAALSAVT-HLIK--------N-----GEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_pred HHHHHHHHHHHHhCCCE-------EEEeCcHHHHHHHHH-HHhC--------C-----CCEEEEcCCchhhHHHHHHHHH
Confidence 45667788999998754 677788887764333 3311 1 2689999999987653 34
Q ss_pred HHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccccccc
Q 011057 172 RYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFI 251 (494)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~ 251 (494)
...|++++.++. .|+++++++++++|++|++.+++||+|.+.|+++|+++|+++ |++++||++|+.+.
T Consensus 193 ~~~G~~v~~vd~------~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~------g~~lIVD~A~a~~~ 260 (464)
T PLN02509 193 PRSGVVVKRVNT------TNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQ------GALVLVDNSIMSPV 260 (464)
T ss_pred HHCCeEEEEeCC------CCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHc------CCEEEEECCccccc
Confidence 567888887752 468999999999999999999999999999999999999999 99999999998654
Q ss_pred ccccCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHH
Q 011057 252 APFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQY 329 (494)
Q Consensus 252 ~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~ 329 (494)
. ..+ . ..++|+++++++||+.++.+ .|+++++++... ..+....... ++. .....+|
T Consensus 261 ~--~~p-----l-~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~-~~~~~~~~~~----------g~~--l~p~~A~ 319 (464)
T PLN02509 261 L--SRP-----L-ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLA-KEVYFLQNSE----------GSG--LAPFDCW 319 (464)
T ss_pred c--CCh-----h-hcCCcEEEecCcccccCCCccceeEEEeccHHHH-HHHHHHHHhc----------CCC--cCHHHHH
Confidence 2 111 1 13789999999999988776 577766554321 1111000001 110 1122233
Q ss_pred HHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCCCCCCHHHHHH
Q 011057 330 YQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDNKRHDEFEVAE 393 (494)
Q Consensus 330 ~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~ 393 (494)
..++ +.+.+..++++..+++.++.+.|+++|.++ +..+. ...++++|.+ +. ......+.+
T Consensus 320 l~lr--~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~-~~-~~~~~~f~~ 395 (464)
T PLN02509 320 LCLR--GIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT-GS-VALSKHLVE 395 (464)
T ss_pred HHHh--hhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe-CC-HHHHHHHHH
Confidence 3333 334567789999999999999999999875 44432 0245899988 21 112344555
Q ss_pred HHHhcCceee-----c-cccCCC--------------CCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 394 LLRRFGWIVP-----A-YTMPAD--------------AQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 394 ~L~~~Gi~v~-----~-~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
.|.--.+.++ + ...|.. .-..+.+|+|++- |+++.+++||+++++
T Consensus 396 ~l~l~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGl----E~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 396 TTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFR 460 (464)
T ss_pred cCCcceEcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHc
Confidence 4431111100 0 001110 0124689999985 778888999998875
No 219
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.84 E-value=1.6e-18 Score=173.84 Aligned_cols=325 Identities=15% Similarity=0.060 Sum_probs=204.0
Q ss_pred cCCCCCcccccccCCC-hHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCC-CCCCCCcceeeecChhHHH
Q 011057 53 DGNPRLNLASFVTTWM-EPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAP-LEDSETAVGVGTVGSSEAI 130 (494)
Q Consensus 53 ~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~ggt~a~ 130 (494)
.+++.++|..+.+..+ ++.+.+++.+..+. ..|....+..++++.+.+++.+..|.+ .+ ...+++|+|+++++
T Consensus 25 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~---~~~I~it~G~~~~i 99 (364)
T PRK07865 25 HPDGIVDLSVGTPVDPVPPVIQEALAAAADA--PGYPTTAGTPELREAIVGWLARRRGVTGLD---PAAVLPVIGSKELV 99 (364)
T ss_pred cCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh--CCCCCccCCHHHHHHHHHHHHHHcCCCCCC---cccEEEccChHHHH
Confidence 4344556666554333 46677777665432 245555677889999999998887765 32 13589999999999
Q ss_pred HHHHHHH-HHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEe
Q 011057 131 MLAGLAF-KRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAI 209 (494)
Q Consensus 131 ~~a~~a~-~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~ 209 (494)
.+++.++ .. .++.|+++.++|..+...++..|+++..++. ++++.. .++++|+++
T Consensus 100 ~~~~~~l~~~-------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~--------~~~l~~---~~~~~v~~~ 155 (364)
T PRK07865 100 AWLPTLLGLG-------------PGDVVVIPELAYPTYEVGARLAGATVVRADS--------LTELGP---QRPALIWLN 155 (364)
T ss_pred HHHHHHHcCC-------------CCCEEEECCCCcccHHHHHHhcCCEEEecCC--------hhhCCc---ccceEEEEc
Confidence 8765554 12 1268999999999999999999998877742 222222 567899999
Q ss_pred eCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc---ccc-c-CCCceEEEEcCcccC-C
Q 011057 210 LGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE---WDF-R-LPLVKSINVSGHKYG-L 280 (494)
Q Consensus 210 ~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~---~~~-~-~~~~D~~~~~~hK~l-~ 280 (494)
+++||||.+.+ +++|.++|+++ ++++++|++|+.+.. ..+... ... . ...-.++..++.|.+ +
T Consensus 156 ~p~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 227 (364)
T PRK07865 156 SPSNPTGRVLGVDHLRKVVAWARER------GAVVASDECYLELGW--DAEPVSILDPRVCGGDHTGLLAVHSLSKQSNL 227 (364)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHc------CCEEEEecchhhhcc--CCCCCccccccccCCccceEEEEeechhccCC
Confidence 99999998854 67888899999 999999999986532 111000 000 0 011246667888976 6
Q ss_pred cCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHh
Q 011057 281 VYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLE 359 (494)
Q Consensus 281 ~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~ 359 (494)
++.++||++.. +..+ ..+........ .. .+.+.+.++...+.. +.+++..+.+.++++++.+.|+
T Consensus 228 ~GlRiG~i~~~-~~~~-~~~~~~~~~~~---------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 293 (364)
T PRK07865 228 AGYRAGFVAGD-PALV-AELLEVRKHAG---------MM---VPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALE 293 (364)
T ss_pred CceeeEEEecC-HHHH-HHHHHHHHhcC---------CC---cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77889988653 3222 21111111000 01 112233344444433 3345666777788889999999
Q ss_pred hCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHH
Q 011057 360 KTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
+.+ +.+..+ ..+++.+.-.+ .+..++.+.|.++|+.+...... ...+..++|+++.. ++++++..++.|
T Consensus 294 ~~g-~~~~~~--~~~~~~~~~~~---~~~~~~~~~l~~~gv~v~pg~~f-~~~~~~~iRi~~~~--~~~~~~~~~~~l 362 (364)
T PRK07865 294 AAG-FRVDHS--EAGLYLWATRG---EDCWDTVAWLAERGILVAPGDFY-GPAGAQHVRVALTA--TDERIAAAVERL 362 (364)
T ss_pred HcC-CcccCC--CccEEEEEeCC---CCHHHHHHHHHHCCEEEeCcccc-CcCCCCEEEEEecC--CHHHHHHHHHHh
Confidence 875 765544 34544333212 25678889999999987543321 11234689999974 456666555444
No 220
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=1.2e-18 Score=172.49 Aligned_cols=299 Identities=14% Similarity=0.152 Sum_probs=197.4
Q ss_pred CChHHHHHHHHHHhcc-cCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINK-NYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKR 145 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~ 145 (494)
+++|.+.+++.+++.. +...|. .++..+ +++++++++|+++ ..+++|+|+++++.+.+.+. .
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~----lr~~ia~~~~~~~-----~~I~~t~G~~~~l~~~~~~~-~------ 93 (337)
T PRK03967 31 DLPEELKEEIFEELKRVPFNRYP-HITSDP----LREAIAEFYGLDA-----ENIAVGNGSDELISYLVKLF-E------ 93 (337)
T ss_pred CCCHHHHHHHHHHhhcCccccCC-CCCHHH----HHHHHHHHhCcCc-----ceEEEcCCHHHHHHHHHHHh-C------
Confidence 3457788888777754 233342 234444 5556888888765 35889999999987654433 1
Q ss_pred HhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHH
Q 011057 146 KAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLN 225 (494)
Q Consensus 146 ~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~ 225 (494)
+++|+++.+.|..+..+++..|++++.++++++ +.+|++.+++.+ ++++++++++|+||||.+.+.++|.
T Consensus 94 --------gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~ 163 (337)
T PRK03967 94 --------GKHIVITPPTFGMYSFYAKLNGIPVIDVPLKED-FTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEEEIL 163 (337)
T ss_pred --------CCeEEEeCCChHHHHHHHHHcCCeEEEeecCCC-CCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 267999999999888888999999999998764 789999998865 5678888999999999999999999
Q ss_pred HHHHHhhcccCCCceEEEecccccccccccCCccccccc-CCCceEEEEcCcccCC-cCCceEEEEEeCCCCcccccccc
Q 011057 226 DLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIFH 303 (494)
Q Consensus 226 ~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~hK~l~-~p~g~G~~~~~~~~~~~~~~~~~ 303 (494)
+++ ++ ++++++|++|..+.. ........ .+.+ .+..++.|.+. ++.++||++..+ ..+ ..+...
T Consensus 164 ~i~-~~------~~~ii~De~y~~~~~----~~~~~~~~~~~~v-i~l~S~SK~~~l~GlRiG~iv~~~-~~i-~~~~~~ 229 (337)
T PRK03967 164 KVL-ET------GKPVVLDEAYAEFSG----KSLIGLIDEYPNL-ILLRTFSKAFGLAGIRAGYAIANE-EII-DALYRI 229 (337)
T ss_pred HHH-hc------CCEEEEECchhhhcc----cchHHHHhhCCCE-EEEecchHhhcchhhhheeeecCH-HHH-HHHHhh
Confidence 999 47 899999999986531 11000111 1232 45567889875 788999998643 222 211111
Q ss_pred cCCCCCCCCCcccccCcchHHHHHHHHHHHHhc-HhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecC
Q 011057 304 INYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-FEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKD 382 (494)
Q Consensus 304 ~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~ 382 (494)
.. . .+ .+.+++.++...+. .+.+.+..+...+.++.+.+.|.+.. .+ ...+++.+.+
T Consensus 230 ~~-------~----~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~-----~~-~~~~~~~~~~-- 287 (337)
T PRK03967 230 KP-------P----FS---LNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEYA-----YP-SDANFLLLKL-- 287 (337)
T ss_pred cC-------C----CC---CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccCc-----CC-CCCcEEEEhH--
Confidence 00 0 01 12334444444443 23344455566667777888886642 12 2344544332
Q ss_pred CCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 383 NKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 383 ~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
.+.+.|.++|+.++... . ....++|+++. +.++.+++++.|+++.+
T Consensus 288 -------~~~~~l~~~gi~v~~~~--~--~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 288 -------DAYDYLLENGIVVRKLS--G--RLEGHIRVTVG---KREENDEFIKALKEIKE 333 (337)
T ss_pred -------HHHHHHHHCCEEEEeCC--C--CCCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 37888999999886432 1 23457999987 56778888888877654
No 221
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.84 E-value=2.8e-18 Score=157.60 Aligned_cols=307 Identities=15% Similarity=0.036 Sum_probs=224.8
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcc-----
Q 011057 90 YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQ----- 164 (494)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h----- 164 (494)
.+.+..+-+.+-.+||.++|..++ .++++.+.+-.++-.+.++.+.. .+..||+++...
T Consensus 71 ~~~W~~lp~~lgdklApLiGA~~~-----Evvv~dtts~nl~k~L~aalr~~-----------~~r~vIv~E~~~fpTdl 134 (407)
T COG3844 71 KADWFDLPERLGDKLAPLIGARAG-----EVVVTDTTSINLFKVLAAALRPQ-----------EGRRVIVSEGDNFPTDL 134 (407)
T ss_pred CCchhhchhHHHHHhhhhhcCCCC-----ceEEeCCcchHHHHHHHHHhccC-----------CCceEEeecCCCCCcch
Confidence 456667777889999999999863 35666555555555555554321 124677666433
Q ss_pred hHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 011057 165 VCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVD 244 (494)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (494)
+.....++++|... +- .+.+.++++++++++++.+|.++++++.||...++.+|.+++|++ ++++.-|
T Consensus 135 y~a~g~~~~~~~~~-----~~-~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~------galv~wD 202 (407)
T COG3844 135 YIAEGLADLLGIGY-----DL-EGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQH------GALVGWD 202 (407)
T ss_pred hhhcchhhhhcccc-----cc-eeeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhc------CceEEee
Confidence 23444566666551 11 146778899999999999999999999999999999999999999 9999999
Q ss_pred cccccccccccCCcccccccCCCceEEEEcCcccCCcCCce-EEEEEeCCCCcccccccccCCCCCCCC-----------
Q 011057 245 AASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGI-GWVIWRNKEDLPEELIFHINYLGADQP----------- 312 (494)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~-G~~~~~~~~~~~~~~~~~~~y~~~~~~----------- 312 (494)
-||+.|.+|. ++...++|+-+.++||++.+++|. +++++.++ ......+....|.+...+
T Consensus 203 LAHsaGavp~-------~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~-h~e~~~~~lsgW~gha~pf~m~~~y~p~~ 274 (407)
T COG3844 203 LAHSAGAVPV-------DLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPR-HRERSWPPLSGWWGHARPFAMEEVYAPGP 274 (407)
T ss_pred hhcccCCcce-------eecccCCCeeeeeeceeccCCCCCceeEEeccc-cccccccccccccCCCCcchhhhccCcCc
Confidence 9999987654 555568999999999999887765 66666544 333344444556654211
Q ss_pred --CcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC---CeEEeecCC---CccEEEEEecCCC
Q 011057 313 --TFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTG---RFNIVSKDE---GVPLVAFSLKDNK 384 (494)
Q Consensus 313 --~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~---~~~~v~f~~~~~~ 384 (494)
..-..++.+..+..++..+|..+...++.+.+++...+++||.+.++... ++++.++.. +...|+|.++
T Consensus 275 ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp--- 351 (407)
T COG3844 275 GARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP--- 351 (407)
T ss_pred cccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC---
Confidence 00134566677778888899999988899999999999999999998763 377877643 6678899884
Q ss_pred CCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEecc-CCChHHHHHHHHHHHHHHHHH
Q 011057 385 RHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIRE-DFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 385 ~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~-~~t~~~id~~i~~l~~~~~~l 444 (494)
+...+++.|.++|++.- .....++|+.+++ +++-.|+-..++.|+++++.+
T Consensus 352 --~~~~V~qaLi~rGVigD-------~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 352 --HGYQVMQALIDRGVIGD-------FREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred --cHHHHHHHHHHcCcccc-------ccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 46899999999999841 2234579999876 566678877777777777654
No 222
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.84 E-value=6.4e-18 Score=180.89 Aligned_cols=353 Identities=13% Similarity=0.100 Sum_probs=226.5
Q ss_pred CCCCCCCCHHHHHHHHHHhhhhcCCCCCcccc-cccCCChHHHHHHHHHH---hcc-cCCCCCCChhhHHHHHHHHHHHH
Q 011057 31 TMPENSIPKEAAYQIINDELMLDGNPRLNLAS-FVTTWMEPECDKLMMAA---INK-NYVDMDEYPVTTELQNRCVNIIA 105 (494)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~---~~~-~~~~~~~~~~~~~le~~~~~~la 105 (494)
.+|+ ++++.++.++++++...+......++. +.++..+|.+.+.+.+- +.. .+..++.+++..+..-+...+++
T Consensus 41 ~lp~-~~sE~e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~ 119 (939)
T TIGR00461 41 QLEA-PSKEYEALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVS 119 (939)
T ss_pred CCCC-CCCHHHHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHH
Confidence 4554 568999999999887655332211122 33334455555344321 111 23344557788888889999999
Q ss_pred HHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH----HHHHcCCeeEEE
Q 011057 106 RLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK----FARYFEVELKEV 181 (494)
Q Consensus 106 ~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~----~~~~~G~~v~~v 181 (494)
+|+|++.. ......++|.+....+++.+... + ...+|++++..|+.... .++..|++++.+
T Consensus 120 eLtGm~~a-----NaSl~d~atA~aEa~~~a~~~~~-------~---~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~ 184 (939)
T TIGR00461 120 DLTGLPVA-----NASLLDEGTAAAEAMALSFNVSK-------K---KANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV 184 (939)
T ss_pred HHHCCChh-----hhhccchhhHHHHHHHHHHHhhc-------C---CCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE
Confidence 99999862 23445555555443333332210 0 12579999999987654 345678888877
Q ss_pred eccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc
Q 011057 182 KLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW 261 (494)
Q Consensus 182 ~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (494)
+ +++|++.+ ++.+|+++.|++. |.+.|+++|++++|++ |.++++++-.....+ ..+.
T Consensus 185 ~---------~~~l~~~~--~~~~v~~q~Pn~~-G~ied~~~i~~~~h~~------gal~~~~ad~~al~l--l~~P--- 241 (939)
T TIGR00461 185 D---------CSDIKKAV--DVFGCLLQYPATD-GSILDYKQLIDALHSH------KSLVSVAADLMALTL--LTPP--- 241 (939)
T ss_pred c---------HHHHhhcC--CEEEEEEECCCCC-eEEecHHHHHHHHHHc------CCEEEEEechHHhCC--cCCH---
Confidence 4 34566555 5677777777655 9999999999999999 999999654432211 2221
Q ss_pred cccCCCceEEEEcCcccCC----cCCceEEEEEeCCCCcccccccc-----cC------CCCCCC-CCccc---ccCcc-
Q 011057 262 DFRLPLVKSINVSGHKYGL----VYAGIGWVIWRNKEDLPEELIFH-----IN------YLGADQ-PTFTL---NFSKG- 321 (494)
Q Consensus 262 ~~~~~~~D~~~~~~hK~l~----~p~g~G~~~~~~~~~~~~~~~~~-----~~------y~~~~~-~~~~~---~~s~~- 321 (494)
+..++|++..++++|+. ++++.|++.+++.. .+.++-+ .+ |.-..+ +...+ ..+.+
T Consensus 242 --ge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l--~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNI 317 (939)
T TIGR00461 242 --GHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEY--NRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNI 317 (939)
T ss_pred --HHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhh--HhhCCCCceeEEecCCCCccceeecccccccccccccCcch
Confidence 12389999888888865 24567898887642 1222111 01 100000 00000 01111
Q ss_pred --hHHHHHH--HHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHh
Q 011057 322 --SSQVIAQ--YYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRR 397 (494)
Q Consensus 322 --~~~~~a~--~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~ 397 (494)
....++. .+.+.++|.+|++++.++.+.++.+|.++|++.| +++..++ .+..+.+++.. .+..++.++|.+
T Consensus 318 Ct~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G-~~~~~~~-fF~~~~v~~~~---~~~~~i~~~~~~ 392 (939)
T TIGR00461 318 CTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDP-HELINKT-WFDTLTVKVGN---GISSELLKAAEE 392 (939)
T ss_pred hHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCC-ccceEEEEeCC---CCHHHHHHHHHH
Confidence 1112333 3347889999999999999999999999999965 9988764 56777777631 257899999999
Q ss_pred cCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 398 FGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 398 ~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
+||.++. .....+++|+++.+|.+||+.|++.+.
T Consensus 393 ~gi~l~~-------~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 393 FNINLRA-------VDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred CCCeeee-------cCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 9998643 112469999999999999998888774
No 223
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.84 E-value=3.4e-18 Score=170.80 Aligned_cols=322 Identities=15% Similarity=0.067 Sum_probs=201.7
Q ss_pred CCCCCcccccccCC-ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCC-CCCCCCcceeeecChhHHHH
Q 011057 54 GNPRLNLASFVTTW-MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAP-LEDSETAVGVGTVGSSEAIM 131 (494)
Q Consensus 54 ~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~ggt~a~~ 131 (494)
++..++|+.+.+.. +++.+.+++.++.. ...|....+..++++++.+++.+.+|.+ .+ ...+++|+|+++++.
T Consensus 20 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~---~~~I~it~G~~~~i~ 94 (357)
T TIGR03539 20 PDGIVDLSVGTPVDPVPPLIRAALAAAAD--APGYPQTWGTPELREAIVDWLERRRGVPGLD---PTAVLPVIGTKELVA 94 (357)
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHh--hCCCCcccCCHHHHHHHHHHHHHhcCCCCCC---cCeEEEccChHHHHH
Confidence 33445666655433 35667777765543 2334445577889999999998877765 32 245889999999988
Q ss_pred HHHHHH-HHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEee
Q 011057 132 LAGLAF-KRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAIL 210 (494)
Q Consensus 132 ~a~~a~-~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~ 210 (494)
.++.++ .. .+++|++++++|..+...++..|++++.++ |++++. .+++++|++++
T Consensus 95 ~~~~~l~~~-------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--------~~~~l~---~~~~~~v~~~~ 150 (357)
T TIGR03539 95 WLPTLLGLG-------------PGDTVVIPELAYPTYEVGALLAGATPVAAD--------DPTELD---PVGPDLIWLNS 150 (357)
T ss_pred HHHHHHcCC-------------CCCEEEECCCCcHHHHHHHHhcCCEEeccC--------ChhhcC---ccCccEEEEeC
Confidence 766554 11 136899999999999988899999877664 122222 24688999999
Q ss_pred CCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc-cccc----CCCceEEEEcCcccC-Cc
Q 011057 211 GSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE-WDFR----LPLVKSINVSGHKYG-LV 281 (494)
Q Consensus 211 ~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~----~~~~D~~~~~~hK~l-~~ 281 (494)
++||||...+ +++|+++|+++ ++++++|++|+.+.. ..+... .+.. ...-.++..++.|.+ ++
T Consensus 151 p~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~ 222 (357)
T TIGR03539 151 PGNPTGRVLSVDELRAIVAWARER------GAVVASDECYLELGW--EGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLA 222 (357)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHc------CeEEEEecchhhhcc--CCCCccceecccCCCccccEEEEeccccccCCC
Confidence 9999999865 66799999999 999999999976431 111000 0000 001135666888975 67
Q ss_pred CCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhh
Q 011057 282 YAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEK 360 (494)
Q Consensus 282 p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~ 360 (494)
+.++|+++.. +..+....... ... . .. .+.+++.++...+.. ..++...++..++++++.+.|++
T Consensus 223 G~R~G~~i~~-~~~~~~~~~~~-~~~-~--------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~ 288 (357)
T TIGR03539 223 GYRAGFVAGD-PALVAELLTVR-KHA-G--------LM---VPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEK 288 (357)
T ss_pred ceeEEEEecC-HHHHHHHHHHH-hhc-c--------cC---CCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888998743 22221111111 000 0 01 122234444444432 33455666777888899999988
Q ss_pred CCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHH
Q 011057 361 TGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVL 435 (494)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~ 435 (494)
.+ +.+..+ ..+++.+...+ .+..++.+.|.++||.+...... ...+..++|+++.. +.++++..++
T Consensus 289 ~g-~~~~~p--~~~~~~~~~~~---~~~~~~~~~l~~~gV~v~pg~~f-~~~~~~~iRis~~~--~~~~i~~~~~ 354 (357)
T TIGR03539 289 AG-FRIDHS--EAGLYLWATRG---EDAWDTVDRLAELGILVAPGDFY-GPAGSQHVRVALTA--TDERIAAAVA 354 (357)
T ss_pred cC-CCCcCC--CccEEEEEECC---CCHHHHHHHHHhCCEEECCcccc-CCCCCCeEEEEecC--CHHHHHHHHH
Confidence 75 765544 35665555422 25678999999999987554322 12235689999974 4555554443
No 224
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.84 E-value=2.4e-18 Score=173.35 Aligned_cols=284 Identities=17% Similarity=0.100 Sum_probs=186.5
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcc----hHHHHHHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQ----VCWEKFARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h----~s~~~~~~~~ 174 (494)
++++.||++.|.+. .+++++|+.|+..++.++... +++|+++...| ..+...++..
T Consensus 74 ~le~~lA~l~g~~~-------al~~~sG~~Ai~~~l~all~~-------------Gd~Vl~~~~~~~~t~~~~~~~~~~~ 133 (403)
T PRK07810 74 MFEERLRLIEGAEA-------CFATASGMSAVFTALGALLGA-------------GDRLVAARSLFGSCFVVCNEILPRW 133 (403)
T ss_pred HHHHHHHHHhCCCc-------EEEECChHHHHHHHHHHHhCC-------------CCEEEEccCCcchHHHHHHHHHHHc
Confidence 35556999999864 889999999998877665321 25788887655 3445567778
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++. .|+++++++++++|++|++.+++||+|.+.|+++|+++|+++ +++++||++|+.+..
T Consensus 134 G~~v~~vd~------~d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~------g~~vivD~a~a~~~~-- 199 (403)
T PRK07810 134 GVETVFVDG------EDLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAA------GAKVVLDNVFATPLL-- 199 (403)
T ss_pred CcEEEEECC------CCHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECCCCcccc--
Confidence 999988863 388999999999999999999999999999999999999999 999999999986532
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
..+ . . .++|+++.+++|++.++.. .|+++.++ ..+...+. .+.... +.. .....+|.++
T Consensus 200 ~~~-~--~---~gaDivv~S~tK~l~g~g~~~gG~v~~~~-~~~~~~l~---~~~~~~-------g~~--~s~~~a~l~l 260 (403)
T PRK07810 200 QRG-L--P---LGADVVVYSGTKHIDGQGRVLGGAILGDR-EYIDGPVQ---KLMRHT-------GPA--LSAFNAWVLL 260 (403)
T ss_pred CCh-h--h---cCCcEEEccCCceecCCcCceeEEEEeCh-HHHHHHHH---HHHHHh-------CCC--CCHHHHHHHH
Confidence 111 1 1 2689999999999966432 36655443 22211111 010000 111 1223344444
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-Eeec-----C----------CCccEEEEEecCCCC---CCHHHHHH
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSK-----D----------EGVPLVAFSLKDNKR---HDEFEVAE 393 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-----~----------~~~~~v~f~~~~~~~---~~~~~l~~ 393 (494)
+ +.+.+..++++..+++.++.+.|++.|.++ +..| + ...++++|.+++... ....++.+
T Consensus 261 ~--~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~ 338 (403)
T PRK07810 261 K--GLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLD 338 (403)
T ss_pred h--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHH
Confidence 3 334567889999999999999999998776 4332 1 135689999864211 11234444
Q ss_pred HHHhcCc--ee----eccccCCC--------------CCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 394 LLRRFGW--IV----PAYTMPAD--------------AQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 394 ~L~~~Gi--~v----~~~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
+|.--.+ .. +....|.. .-....+|+|++- |+++.++++|++++
T Consensus 339 ~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGl----E~~~dli~dl~~Al 402 (403)
T PRK07810 339 KLRVIDISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGL----EDTDDLIADLDRAL 402 (403)
T ss_pred hCCceEEeccCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHhh
Confidence 4331111 00 00011110 0123579999985 77888899998875
No 225
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=2.1e-18 Score=174.49 Aligned_cols=300 Identities=16% Similarity=0.140 Sum_probs=190.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHH----HHHHH
Q 011057 98 NRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWE----KFARY 173 (494)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~----~~~~~ 173 (494)
+.+++.++++.|.+. .+++++|+.|+.+++.++.. .+++||++...|.+.. ..+..
T Consensus 72 ~~le~~la~l~g~~~-------~v~fsSG~~Ai~~al~~ll~-------------~Gd~VI~~~~~y~~t~~~~~~~l~~ 131 (437)
T PRK05613 72 EALENRIASLEGGVH-------AVAFASGQAAETAAILNLAG-------------AGDHIVTSPRLYGGTETLFLVTLNR 131 (437)
T ss_pred HHHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHhcC-------------CCCEEEECCCccHHHHHHHHHHHHh
Confidence 345566999999864 67777788888876665521 1268999988887653 44577
Q ss_pred cCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccccccccc
Q 011057 174 FEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAP 253 (494)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (494)
.|++++.++ +. .|+++++++++++|++|++.+++|++|.+.|+++|+++|+++ |++++||++++.+..
T Consensus 132 ~Gi~v~~vd-~~----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~------gi~livD~t~a~g~~- 199 (437)
T PRK05613 132 LGIEVTFVE-NP----DDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRN------QVPLIVDNTIATAAL- 199 (437)
T ss_pred cCeEEEEEC-CC----CCHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCeEEEECCCccccc-
Confidence 899999887 32 288999999999999999989999999999999999999999 999999999976542
Q ss_pred ccCCcccccccCCCceEEEEcCcccCCcC-CceEEEEEeCCCCcccccc---cccCCCCCCCC-----------C--c--
Q 011057 254 FLYPELEWDFRLPLVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELI---FHINYLGADQP-----------T--F-- 314 (494)
Q Consensus 254 ~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~---~~~~y~~~~~~-----------~--~-- 314 (494)
..+ . ..++|++++|+|||+.++ -++|.+++.+......... ....++..... . +
T Consensus 200 -~~p-~-----~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (437)
T PRK05613 200 -VRP-L-----ELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGL 272 (437)
T ss_pred -cCh-H-----HhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHH
Confidence 111 1 137999999999998764 3456666643221000000 00000000000 0 0
Q ss_pred -----ccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------C-C
Q 011057 315 -----TLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------E-G 372 (494)
Q Consensus 315 -----~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~-~ 372 (494)
..............| +..-|.+.+..++++..+++..+.+.|+++|.++ +..|. . .
T Consensus 273 ~~~~~~~~~~G~~~~p~~a~--l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~ 350 (437)
T PRK05613 273 KARAGLLRDTGATLSPFNAW--VTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYT 350 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHH--HHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCC
Confidence 000000001112222 3334556678899999999999999999999865 33321 0 1
Q ss_pred ccEEEEEecCCCCCCHHHHHHHHHhcCceee-----c-cccCCCC--------------CCceEEEEEeccCCChHHHHH
Q 011057 373 VPLVAFSLKDNKRHDEFEVAELLRRFGWIVP-----A-YTMPADA--------------QHITVLRVVIREDFSRTLAER 432 (494)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~-----~-~~~~~~~--------------~~~~~lRvs~~~~~t~~~id~ 432 (494)
.++++|.+++. ......+.+.|.=-.+..+ + ...|... -....+|+|++- |+.+.
T Consensus 351 gg~~sf~l~~~-~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl----E~~~d 425 (437)
T PRK05613 351 GSVLSFDIKGG-KDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVGI----EDIDD 425 (437)
T ss_pred ceEEEEEecCC-HHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEecc----CCHHH
Confidence 45899998531 1123345554432111110 0 0112110 113579999985 77888
Q ss_pred HHHHHHHHHHH
Q 011057 433 LVLDITKVLHE 443 (494)
Q Consensus 433 ~i~~l~~~~~~ 443 (494)
++++|+++++.
T Consensus 426 Li~Dl~~Al~~ 436 (437)
T PRK05613 426 IIADLEGGFAA 436 (437)
T ss_pred HHHHHHHHHhh
Confidence 99999998874
No 226
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.84 E-value=7.3e-18 Score=172.11 Aligned_cols=350 Identities=15% Similarity=0.076 Sum_probs=211.5
Q ss_pred CcccccccCC-C--hHHHHHHHHHHhccc-----CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHH
Q 011057 58 LNLASFVTTW-M--EPECDKLMMAAINKN-----YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEA 129 (494)
Q Consensus 58 ~~~~~~~~~~-~--~p~~~~~~~~~~~~~-----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a 129 (494)
++|+.+.+.. + .+.+.+++.+.++.. ...|....+..++++.+.+++.+..|.+.+ ...+++|+|++++
T Consensus 33 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~---~~~I~it~Ga~~a 109 (416)
T PRK09440 33 IMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNIS---PQNIALTNGSQSA 109 (416)
T ss_pred eeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCC---hhhEEEccChHHH
Confidence 5566554432 2 235667777666542 123555557788999999999888786542 2458999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCeEEe-CCCcchHHHHHHHHcC----CeeEEEeccCC--ccccCHHHHHHhhhhC
Q 011057 130 IMLAGLAFKRKWQNKRKAEGKPFDKPNIVT-GANVQVCWEKFARYFE----VELKEVKLSEG--YYVMDPVKAVEMVDEN 202 (494)
Q Consensus 130 ~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G----~~v~~v~~~~~--~~~~d~~~L~~~i~~~ 202 (494)
+.+++.+.... +....++.|++ ..++++.+...+...| ..+..++++.+ .+.+|+++|+ +.++
T Consensus 110 l~~~~~~l~~~--------~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~ 179 (416)
T PRK09440 110 FFYLFNLFAGR--------RADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDED 179 (416)
T ss_pred HHHHHHHHhcc--------ccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCC
Confidence 98887776431 00011257888 6899988877655433 22334444432 2579999997 4567
Q ss_pred CeEEEEeeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccC
Q 011057 203 TICVAAILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG 279 (494)
Q Consensus 203 t~~vv~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l 279 (494)
++++++++|+||||.+.+ +++|+++|+++ ++++++|++|+............... .+++ ++..++.|++
T Consensus 180 ~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~De~Y~~~~~~~~~~~~~~~~-~~~v-I~~~SfSK~~ 251 (416)
T PRK09440 180 TGAICVSRPTNPTGNVLTDEELEKLDALARQH------NIPLLIDNAYGPPFPGIIFSEATPLW-NPNI-ILCMSLSKLG 251 (416)
T ss_pred ceEEEEecCCCCCCccCCHHHHHHHHHHHHHc------CCcEEEeCCccccCCCcchhhcCccc-cCCe-EEEecccccC
Confidence 889999999999999966 67788889999 99999999997532110000000000 1222 4446888998
Q ss_pred CcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHH-----HHHHHHHHHHHH
Q 011057 280 LVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRN-----VMENCHENAMVL 354 (494)
Q Consensus 280 ~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~-----~~~~~~~~a~~l 354 (494)
+++.++||++... ..+ +.+........ . ..+.+.+.++...+....+.+ ..+.+.++.+.+
T Consensus 252 ~pGlRiG~~i~~~-~l~-~~~~~~~~~~~---------~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~ 317 (416)
T PRK09440 252 LPGVRCGIVIADE-EII-EALSNMNGIIS---------L---APGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLA 317 (416)
T ss_pred CCcceEEEEeCCH-HHH-HHHHHHHHHhc---------c---CCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 8899999987533 222 21111101000 0 122344555555554322222 233344555666
Q ss_pred HHHHhhC-C--CeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccC--CCC----CCceEEEEEeccCC
Q 011057 355 KEGLEKT-G--RFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMP--ADA----QHITVLRVVIREDF 425 (494)
Q Consensus 355 ~~~L~~~-~--~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~--~~~----~~~~~lRvs~~~~~ 425 (494)
.+.|.+. + ++.+..+. ...++.+.++. ...+..++.+.|.++|+.+...... ... .+..++|+++..
T Consensus 318 ~~~L~~~l~~~~~~~~~p~-gg~fiw~~~~~-~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~-- 393 (416)
T PRK09440 318 IALLRRYLPDEPCLIHKPE-GAIFLWLWFKD-LPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ-- 393 (416)
T ss_pred HHHHHHhcccCCeEEecCC-CceEEEEECCC-CCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecC--
Confidence 6666553 2 24443332 34555566642 1346788999999999987543221 110 013479999974
Q ss_pred ChHHHHHHHHHHHHHHHHHhc
Q 011057 426 SRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 426 t~~~id~~i~~l~~~~~~l~~ 446 (494)
+.++++.+++.|+++++.+.+
T Consensus 394 ~~~~l~~~i~~l~~~~~~~~~ 414 (416)
T PRK09440 394 DDEEIEKGIAILAEEVEKAYA 414 (416)
T ss_pred CHHHHHHHHHHHHHHHHHHhh
Confidence 678899888888888776543
No 227
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.84 E-value=7.3e-18 Score=171.39 Aligned_cols=316 Identities=10% Similarity=-0.006 Sum_probs=199.2
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCee
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVEL 178 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (494)
++++.+++++|.+. ++++++||+|+.+++.++...+..+ .+.. .+++||++..+|.++..++...|+++
T Consensus 67 ~fe~~lA~~~g~~~-------~v~~~sGt~al~~aL~al~~~~~~~---~~~~-pGd~VIv~~~t~~a~~~~v~~~G~~p 135 (438)
T PRK15407 67 AFEKKLAEFLGVRY-------ALLVNSGSSANLLAFSALTSPKLGD---RALK-PGDEVITVAAGFPTTVNPIIQNGLVP 135 (438)
T ss_pred HHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHHhhccccc---cCCC-CCCEEEECCCCcHHHHHHHHHcCCEE
Confidence 45566999999864 8889999999998887764321110 0111 13689999999999999999999999
Q ss_pred EEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCc
Q 011057 179 KEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPE 258 (494)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~ 258 (494)
+.++++.+++.+|+++++++++++|++|++++. +|...++++|.++|+++ ++++++|+||+.|.. ....
T Consensus 136 v~vdvd~~~~~id~~~le~~i~~~tkaVi~~~~---~G~p~dl~~I~~la~~~------gi~vIeDaa~a~G~~--~~g~ 204 (438)
T PRK15407 136 VFVDVELPTYNIDASLLEAAVSPKTKAIMIAHT---LGNPFDLAAVKAFCDKH------NLWLIEDNCDALGST--YDGR 204 (438)
T ss_pred EEEecCCCcCCcCHHHHHHHcCcCCeEEEEeCC---CCChhhHHHHHHHHHHC------CCEEEEECccchhhh--cCCe
Confidence 999998656889999999999999998888763 67788999999999999 999999999987753 2111
Q ss_pred ccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCC--------------------C-----CCC
Q 011057 259 LEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGA--------------------D-----QPT 313 (494)
Q Consensus 259 ~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~--------------------~-----~~~ 313 (494)
....+ ..+-++++...|.+.++.| |+++++++... ........+-.. . ...
T Consensus 205 ~~G~~--gd~~~fSf~~~k~~~~geG-G~l~t~d~~l~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (438)
T PRK15407 205 MTGTF--GDIATLSFYPAHHITMGEG-GAVFTNDPLLK-KIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHK 280 (438)
T ss_pred eeecc--CceEEEeCCCCCCccccCc-eEEEECCHHHH-HHHHHHHHhCccccccccccccccccccccccccccccccc
Confidence 11111 1234455555576655554 88887765432 211111111000 0 000
Q ss_pred c--ccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCC-eEEeecCC--Ccc--EEEEEecCCCCC
Q 011057 314 F--TLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGR-FNIVSKDE--GVP--LVAFSLKDNKRH 386 (494)
Q Consensus 314 ~--~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~~~~~--~~~--~v~f~~~~~~~~ 386 (494)
+ ...|.. ..+-.+.+++....-+.++++.++.+++++++.+.|..+++ +.+...+. ..+ .+.+.+....+.
T Consensus 281 ~~~~~~G~n--~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 358 (438)
T PRK15407 281 YTYSHLGYN--LKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGF 358 (438)
T ss_pred ccccccccc--cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCC
Confidence 0 000111 11122334443334455677888889999999999988764 32222111 111 334455432345
Q ss_pred CHHHHHHHHHhcCceeecccc-CCCC-----------C---------CceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 387 DEFEVAELLRRFGWIVPAYTM-PADA-----------Q---------HITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 387 ~~~~l~~~L~~~Gi~v~~~~~-~~~~-----------~---------~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
+.+++.+.|.++||..+.+.. |... . ....+-+=++...+.+++++.++.|+++++
T Consensus 359 ~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 359 TRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 678999999999997543221 1000 0 012233334667788999999988888764
No 228
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.84 E-value=9.1e-19 Score=176.69 Aligned_cols=292 Identities=17% Similarity=0.168 Sum_probs=193.4
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHH--
Q 011057 90 YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCW-- 167 (494)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~-- 167 (494)
.|...++|+ .+++++|.+. .+++++|+.|+..++.+.... +++|+++.+.|.+.
T Consensus 63 ~p~~~~Le~----~iA~~~g~~~-------~l~~~sG~~Ai~~al~~ll~~-------------Gd~Vl~~~~~y~~~~~ 118 (400)
T PRK06234 63 NPTSTEVEN----KLALLEGGEA-------AVVAASGMGAISSSLWSALKA-------------GDHVVASDTLYGCTFA 118 (400)
T ss_pred CccHHHHHH----HHHHHhCCCc-------EEEEcCHHHHHHHHHHHHhCC-------------CCEEEEecCccchHHH
Confidence 445555554 4899999753 788999999988777665321 25899988877643
Q ss_pred --HHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 011057 168 --EKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDA 245 (494)
Q Consensus 168 --~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (494)
...++..|++++.++. .|+++++++++++|++|++.+|+||+|.+.|+++|.++|+++++ ++++++|+
T Consensus 119 ~~~~~~~~~G~~v~~vd~------~d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~----~i~livDe 188 (400)
T PRK06234 119 LLNHGLTRYGVEVTFVDT------SNLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNK----ECLVFVDN 188 (400)
T ss_pred HHHHHHhhCCeEEEEECC------CCHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCC----CCEEEEEC
Confidence 3445778998888874 37899999999999999999999999999999999999999611 89999999
Q ss_pred ccccccccccCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccc--cCCCCCCCCCcccccCcc
Q 011057 246 ASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFH--INYLGADQPTFTLNFSKG 321 (494)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~--~~y~~~~~~~~~~~~s~~ 321 (494)
+|+.+.. ..+ . . .++|++..+++|++.++.. .|+++.++ +.. ..+... ..+.+ ..
T Consensus 189 a~~~~~~--~~~-l----~-~g~Divv~S~sK~l~g~g~~~gG~v~~~~-~~~-~~l~~~~~~~~~g---------~~-- 247 (400)
T PRK06234 189 TFCTPYI--QRP-L----Q-LGADVVVHSATKYLNGHGDVIAGFVVGKE-EFI-NQVKLFGIKDMTG---------SV-- 247 (400)
T ss_pred CCCchhc--CCc-h----h-hCCcEEEeeccccccCCCCceeEEEEecH-HHH-HHHHHHHHHHhcC---------CC--
Confidence 9987532 111 1 1 2689999999999976542 47766554 222 221110 01111 11
Q ss_pred hHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCCCC
Q 011057 322 SSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDNKR 385 (494)
Q Consensus 322 ~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~ 385 (494)
......|..++ +.+.+..++++..+++.++.+.|++.+.+. +..+. ...++++|.+++. .
T Consensus 248 -l~p~~a~l~~~--~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~-~ 323 (400)
T PRK06234 248 -IGPFEAFLIIR--GMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGG-V 323 (400)
T ss_pred -CCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCc-H
Confidence 11222333333 334456788888899999999999988765 33332 0245889998642 1
Q ss_pred CCHHHHHHHHHhcCceee-----c-cccCCCC--------------CCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 386 HDEFEVAELLRRFGWIVP-----A-YTMPADA--------------QHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 386 ~~~~~l~~~L~~~Gi~v~-----~-~~~~~~~--------------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
.....|.+.|.-.++..+ + ...|... -..+.+|+|++- |+.+.++++|+++++.+
T Consensus 324 ~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 324 EEGKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGL----EDVDDIIADLKQALDLI 398 (400)
T ss_pred HHHHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHHHH
Confidence 124566666654433221 0 0111100 113579999985 77888999999998865
No 229
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.84 E-value=4.5e-19 Score=177.11 Aligned_cols=283 Identities=17% Similarity=0.119 Sum_probs=185.9
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchH----HHHHHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVC----WEKFARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~ 174 (494)
++++.+|++.|.+. .++++||++|+.+++ .+.. .+++|+++.+.|.. +...+...
T Consensus 56 ~le~~la~l~g~~~-------~~~~~sG~~ai~~~~-~ll~-------------~Gd~Vl~~~~~y~~t~~~~~~~~~~~ 114 (366)
T PRK08247 56 VLEQAIADLEGGDQ-------GFACSSGMAAIQLVM-SLFR-------------SGDELIVSSDLYGGTYRLFEEHWKKW 114 (366)
T ss_pred HHHHHHHHHhCCCc-------EEEEcCHHHHHHHHH-HHhC-------------CCCEEEEecCCcCcHHHHHHHHhhcc
Confidence 35566999999975 688889999887654 3321 12578888887764 34455668
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++. .|+++++++++++|++|++.+|+||+|...++++|+++|+++ ++++++|++|+....
T Consensus 115 G~~v~~vd~------~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~------g~~lIvD~t~~~~~~-- 180 (366)
T PRK08247 115 NVRFVYVNT------ASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKH------GLLLIVDNTFYTPVL-- 180 (366)
T ss_pred CceEEEECC------CCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 988888863 488999999999999999999999999999999999999999 999999999965432
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
..+ . ..++|++..+++|++.++.+ .|+++.+++... ..+.....+.+. . .....+|.++
T Consensus 181 ~~p-~-----~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~-~~~~~~~~~~g~---------~---~s~~~a~l~~ 241 (366)
T PRK08247 181 QRP-L-----EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELC-ERLAYYQNAAGA---------V---LSPFDSWLLI 241 (366)
T ss_pred cCc-h-----hcCCcEEEeecceeccCCCceeeeEEecChHHHH-HHHHHHHHhcCC---------C---CChHHHHHHH
Confidence 111 1 13689999999999987654 466654433222 111111111110 1 1122345444
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCcee------eccc
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIV------PAYT 406 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v------~~~~ 406 (494)
+.+ +.+..++++..+++..+.+.|++++++..+..|...++++|.+++. .....+.+.|.-..+.. +...
T Consensus 242 ~~l--~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~~~--~~~~~~~~~l~~~~~~~slg~~~sl~~ 317 (366)
T PRK08247 242 RGM--KTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQDE--EWVNPFLKSLKLITFAESLGGVESFIT 317 (366)
T ss_pred hcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEECCH--HHHHHHHHcCCcceEccCCCCCceEEE
Confidence 433 3455677788999999999999998877544443578999987421 11223333332111000 0011
Q ss_pred cCCC--------------CCCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 407 MPAD--------------AQHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 407 ~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
.|.. .-....+|+|++- |+++.+++||+++++.
T Consensus 318 ~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl----E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 318 YPATQTHADIPEEIRIANGVCNRLLRFSVGI----ENVEDLIADLKQAFKQ 364 (366)
T ss_pred CCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 1110 0123579999985 7788899999999875
No 230
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.84 E-value=2.5e-18 Score=171.87 Aligned_cols=326 Identities=14% Similarity=0.082 Sum_probs=204.2
Q ss_pred HHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcC
Q 011057 70 PECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEG 149 (494)
Q Consensus 70 p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g 149 (494)
.+..+++.+.++.+.... ..+...++|++ +++++|.+. ++.+++||.|+.+++.++.-.
T Consensus 5 ~e~~~~v~~~l~s~~~~~-~g~~~~~fE~~----~a~~~g~~~-------~~~~~sgt~Al~~al~~l~~~--------- 63 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLST-YGPYVEEFEKE----FAEYFGVKY-------AVAVSSGTSALHLALRALGLG--------- 63 (363)
T ss_dssp HHHHHHHHHHHHHTCCSS-SSHHHHHHHHH----HHHHHTSSE-------EEEESSHHHHHHHHHHHTTGG---------
T ss_pred HHHHHHHHHHHHhCCccC-CCHHHHHHHHH----HHHHhCCCe-------EEEeCChhHHHHHHHHhcCCC---------
Confidence 345667777777664321 15566666655 899999864 899999999999998886321
Q ss_pred CCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHH
Q 011057 150 KPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLA 229 (494)
Q Consensus 150 ~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~ 229 (494)
.+++|++|..++.+...++...|++++.++++++++.+|+++++++|+++|++|++++ ..|...|+++|.++|+
T Consensus 64 ---~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~h---~~G~~~d~~~i~~~~~ 137 (363)
T PF01041_consen 64 ---PGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVVH---LFGNPADMDAIRAIAR 137 (363)
T ss_dssp ---TTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE----GGGB---HHHHHHHHH
T ss_pred ---cCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEec---CCCCcccHHHHHHHHH
Confidence 1369999999999999999999999999999977899999999999999999887655 4588889999999999
Q ss_pred HhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCccccccccc-CCCC
Q 011057 230 EKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHI-NYLG 308 (494)
Q Consensus 230 ~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~-~y~~ 308 (494)
++ |++|+.|+||+.|.. ........ ...+-++++...|.+.++- .|+++++++........... ....
T Consensus 138 ~~------~i~lIeD~a~a~g~~--~~g~~~G~--~gd~~~fSf~~~K~i~~ge-GG~v~~~~~~~~~~~~~~~~~g~~~ 206 (363)
T PF01041_consen 138 KH------GIPLIEDAAQAFGAR--YKGRPVGS--FGDIAIFSFHPTKIITTGE-GGAVVTNDPELAERARALRNHGRSR 206 (363)
T ss_dssp HT------T-EEEEE-TTTTT-E--ETTEETTS--SSSEEEEESSTTSSS-SSS--EEEEESTHHHHHHHHHHTBTTEET
T ss_pred Hc------CCcEEEccccccCce--eCCEeccC--CCCceEecCCCCCCCcCCC-CeeEEecHHHHHHHhhhhhccCcCc
Confidence 99 999999999998742 22111111 1223444444568884443 47777776543221111110 0000
Q ss_pred CCCCC------cccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCC-----ccEEE
Q 011057 309 ADQPT------FTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEG-----VPLVA 377 (494)
Q Consensus 309 ~~~~~------~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~-----~~~v~ 377 (494)
..... ..+++..+ .+.+++....-+.+.+..++..+++.++.+.|.+++++.....+.. ...+.
T Consensus 207 ~~~~~~~~~~~~g~n~rm~-----~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~ 281 (363)
T PF01041_consen 207 DAFRRYRHELPPGYNFRMS-----ELQAAIGLAQLKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFP 281 (363)
T ss_dssp SECSTTEESSSS--B-B-B-----HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEE
T ss_pred cccccccccccCCcccccH-----HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccc
Confidence 00000 11111111 1223333333344677888888999999999999998766554321 22445
Q ss_pred EEecCCCCCCHHHHHHHHHhcCceeecccc-CCC----CC----------------CceEEEEEeccCCChHHHHHHHHH
Q 011057 378 FSLKDNKRHDEFEVAELLRRFGWIVPAYTM-PAD----AQ----------------HITVLRVVIREDFSRTLAERLVLD 436 (494)
Q Consensus 378 f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~-~~~----~~----------------~~~~lRvs~~~~~t~~~id~~i~~ 436 (494)
+.+++....+.+++.+.|.++||....+.. |.. .. ....+.+-++...+.+++++.++.
T Consensus 282 i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ 361 (363)
T PF01041_consen 282 IRLPDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEA 361 (363)
T ss_dssp EEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHH
T ss_pred ccccccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhc
Confidence 666543224678999999999998754431 110 00 013456667778888888877766
Q ss_pred HH
Q 011057 437 IT 438 (494)
Q Consensus 437 l~ 438 (494)
|+
T Consensus 362 ir 363 (363)
T PF01041_consen 362 IR 363 (363)
T ss_dssp HH
T ss_pred cC
Confidence 54
No 231
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=4.4e-18 Score=172.47 Aligned_cols=300 Identities=16% Similarity=0.140 Sum_probs=193.8
Q ss_pred HHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchH----HHHHHHHcC
Q 011057 100 CVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVC----WEKFARYFE 175 (494)
Q Consensus 100 ~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~G 175 (494)
+.+.|+++.|.+. .+++++|+.|+..++.++... +++|+++...|.. +...++..|
T Consensus 69 Le~~lA~leg~~~-------al~~~sG~~Ai~~al~~ll~~-------------GD~Vlv~~~~y~~t~~~~~~~~~~~G 128 (431)
T PRK08248 69 FEKRIAALEGGIG-------ALAVSSGQAAITYSILNIASA-------------GDEIVSSSSLYGGTYNLFAHTLPKLG 128 (431)
T ss_pred HHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEccCchhhHHHHHHHHHHhCC
Confidence 4455999999764 889999999999888766321 2689998887753 445567789
Q ss_pred CeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccccccccccc
Q 011057 176 VELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL 255 (494)
Q Consensus 176 ~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (494)
++++.++. .|++++++++++++++|++++++||+|.+.|+++|+++|+++ ++++++|++++.+. .
T Consensus 129 v~v~~vd~------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~------gi~vIvD~t~a~~~---~ 193 (431)
T PRK08248 129 ITVKFVDP------SDPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEH------GIPLIVDNTFASPY---L 193 (431)
T ss_pred EEEEEECC------CCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEeCCCCccc---c
Confidence 99988874 378999999998999999999999999999999999999999 99999999997532 1
Q ss_pred CCcccccccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCc-cc--c---c-ccccCCCCC---C-C--CC-------c
Q 011057 256 YPELEWDFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDL-PE--E---L-IFHINYLGA---D-Q--PT-------F 314 (494)
Q Consensus 256 ~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~-~~--~---~-~~~~~y~~~---~-~--~~-------~ 314 (494)
.... ..++|+++.++|||++++. .+|++++.+.... .. . + .....|... . . .. .
T Consensus 194 ~~pl-----~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (431)
T PRK08248 194 LRPI-----EHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQ 268 (431)
T ss_pred CChh-----HcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHH
Confidence 1111 1379999999999997765 3677777543211 00 0 0 000011000 0 0 00 0
Q ss_pred ccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC----------------CCccEEE
Q 011057 315 TLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD----------------EGVPLVA 377 (494)
Q Consensus 315 ~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~----------------~~~~~v~ 377 (494)
........... .-+.+..-|-+.+..++++..+++..+.+.|+++|.++ +..|. ...++++
T Consensus 269 ~~~~~G~~l~p--~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~s 346 (431)
T PRK08248 269 LLRDLGAALSP--FNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILT 346 (431)
T ss_pred HHHhcCCCCCH--HHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEE
Confidence 00000000111 12223334555667899999999999999999999876 33331 0245899
Q ss_pred EEecCCCCCCHHHHHHHHHhcCcee------eccccCCC--------------CCCceEEEEEeccCCChHHHHHHHHHH
Q 011057 378 FSLKDNKRHDEFEVAELLRRFGWIV------PAYTMPAD--------------AQHITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 378 f~~~~~~~~~~~~l~~~L~~~Gi~v------~~~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
|.+.+. ......+.+.|.--.+.+ +....|.. .-..+.+|+|++- |+.+.+++||
T Consensus 347 f~l~~~-~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~Dl 421 (431)
T PRK08248 347 FGIKGG-VEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGT----EAIDDILDDL 421 (431)
T ss_pred EEecCC-HHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHH
Confidence 998542 112344555553211110 00111111 0114579999985 7889999999
Q ss_pred HHHHHHHhc
Q 011057 438 TKVLHELDS 446 (494)
Q Consensus 438 ~~~~~~l~~ 446 (494)
+++++..+.
T Consensus 422 ~~Al~~~~~ 430 (431)
T PRK08248 422 RQAIRQSQT 430 (431)
T ss_pred HHHHHhhhc
Confidence 999987654
No 232
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.84 E-value=6.2e-18 Score=169.78 Aligned_cols=328 Identities=11% Similarity=0.090 Sum_probs=201.5
Q ss_pred HHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcC
Q 011057 70 PECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEG 149 (494)
Q Consensus 70 p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g 149 (494)
+...+++.+++..+.. +.. ..+.+++++++++++|.+. +++++||++|+.+++.++.-
T Consensus 11 ~~~~~~~~~~l~~~~~-~g~----~~~~~~~e~~la~~~g~~~-------~v~~~sgt~al~~~l~~~~~---------- 68 (375)
T PRK11706 11 GTELDYIQQAMSSGKL-CGD----GGFTRRCQQWLEQRFGSAK-------VLLTPSCTAALEMAALLLDI---------- 68 (375)
T ss_pred HHHHHHHHHHHHcCCc-cCC----CHHHHHHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHhCC----------
Confidence 3345566666655432 111 2344566777999999864 88999999998877665511
Q ss_pred CCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHH
Q 011057 150 KPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLA 229 (494)
Q Consensus 150 ~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~ 229 (494)
..+++|+++.++|.++..++...|++++.++++++++.+|++++++++++++++|++++ ++|...++++|.++|+
T Consensus 69 --~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~~~~i~~la~ 143 (375)
T PRK11706 69 --QPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPVH---YAGVACEMDTIMALAK 143 (375)
T ss_pred --CCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCCCCeEEEEeC---CCCCccCHHHHHHHHH
Confidence 01368999999999999999999999999999877678999999999998898887654 6899999999999999
Q ss_pred HhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCc--ccCCcCCceEEEEEeCCCCcccccccc----
Q 011057 230 EKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGH--KYGLVYAGIGWVIWRNKEDLPEELIFH---- 303 (494)
Q Consensus 230 ~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~h--K~l~~p~g~G~~~~~~~~~~~~~~~~~---- 303 (494)
++ ++++++|+||+.+.. + ... ..+. ..|.-++|+| |.+.++.| |++++.++..........
T Consensus 144 ~~------~i~vIeD~a~a~g~~-~-~~~---~~g~-~~~~~~~Sf~~~K~l~~g~g-G~~~~~~~~~~~~~~~~~~~g~ 210 (375)
T PRK11706 144 KH------NLFVVEDAAQGVMST-Y-KGR---ALGT-IGHIGCFSFHETKNYTAGEG-GALLINDPALIERAEIIREKGT 210 (375)
T ss_pred Hc------CCEEEEECccccccc-c-CCe---eeec-CcCEEEEeCCCCccccccCC-eEEEECCHHHHHHHHHHHHcCC
Confidence 99 999999999987642 1 110 0111 1355555655 98855433 445555443221111010
Q ss_pred --cCCCCCCCCC--cccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCC---eEEeecCC----C
Q 011057 304 --INYLGADQPT--FTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGR---FNIVSKDE----G 372 (494)
Q Consensus 304 --~~y~~~~~~~--~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~---~~~~~~~~----~ 372 (494)
..+....... ....++..-.. .+.+++.......+++..++..++++++.+.|..+++ +++...+. .
T Consensus 211 ~~~~~~~~~~~~~~~~~~g~~~~~~--~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 288 (375)
T PRK11706 211 NRSQFFRGQVDKYTWVDIGSSYLPS--ELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHN 288 (375)
T ss_pred CcchhhccCCCcceeeecccccCcC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCcee
Confidence 0000000000 00001111111 1122222222233566777788888999999987752 33221111 1
Q ss_pred ccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCC-------------------CCceEEEEEeccCCChHHHHHH
Q 011057 373 VPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADA-------------------QHITVLRVVIREDFSRTLAERL 433 (494)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~-------------------~~~~~lRvs~~~~~t~~~id~~ 433 (494)
..++.+.+.. +.+..++.+.|.++||.++.+..|... .....+-+-++...+.+|+++.
T Consensus 289 ~~~~~~~~~~--~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i 366 (375)
T PRK11706 289 AHMFYIKLRD--LEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTV 366 (375)
T ss_pred eEEEEEEECC--cCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHH
Confidence 2244455532 347889999999999986432212100 0112344556667888888888
Q ss_pred HHHHHHHH
Q 011057 434 VLDITKVL 441 (494)
Q Consensus 434 i~~l~~~~ 441 (494)
++.|++++
T Consensus 367 ~~~i~~~~ 374 (375)
T PRK11706 367 IDTILEFF 374 (375)
T ss_pred HHHHHHHh
Confidence 87777653
No 233
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.83 E-value=2.1e-18 Score=169.99 Aligned_cols=354 Identities=18% Similarity=0.117 Sum_probs=188.0
Q ss_pred CCCCCCCCHHHHHHHHHHhhhhcCCCCCcccccccCCChHHHHHH-HHH---Hhcc-cCCCCCCChhhHHHHHHHHHHHH
Q 011057 31 TMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKL-MMA---AINK-NYVDMDEYPVTTELQNRCVNIIA 105 (494)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~---~~~~-~~~~~~~~~~~~~le~~~~~~la 105 (494)
.+|+. .++.++.++++.+...+......++.+.++...|.+.+. +.+ .+.. .+..++.+++..+..-+...+++
T Consensus 42 ~lp~~-~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~ 120 (429)
T PF02347_consen 42 NLPEP-LSEYELLRHLERLASKNKSYTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMIC 120 (429)
T ss_dssp --------HHHHHHHHHHHHTTS--TTS---CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHH
T ss_pred CCCCC-CCHHHHHHHHHHHHhcCCCCCccccccccCceeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 45443 889999999999887654422223334433444544443 321 1211 23344557799999999999999
Q ss_pred HHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHH----HHcCCeeEEE
Q 011057 106 RLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFA----RYFEVELKEV 181 (494)
Q Consensus 106 ~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~----~~~G~~v~~v 181 (494)
+++|+|. ...-.-.+++.+-- +++.+.+....+ +.+|+++...|+.+...+ ...|++++.+
T Consensus 121 eLTGmdv-----aNaSlyd~atA~aE-a~~ma~r~~~~~---------~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~ 185 (429)
T PF02347_consen 121 ELTGMDV-----ANASLYDGATAAAE-AMLMAVRATKRK---------RNKVLVPESLHPQTRAVLRTYAAPLGIEIVEV 185 (429)
T ss_dssp HHHTSSE-----E-SEBSSCCHHHHH-HHHHHHHHHTT------------EEEEETTS-CHHHHHHHHHCCHCCEEEEEE
T ss_pred HhhCCCc-----cCCCCCChhHHHHH-HHHHHHHhcccC---------CcEEEEcCCcChhhHHHHHHhhhhCCeEEEEe
Confidence 9999985 11222224433333 333332221110 248999999998777644 4468889999
Q ss_pred eccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc
Q 011057 182 KLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW 261 (494)
Q Consensus 182 ~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (494)
+++++ +..| ++++.+|++++||+. |.++++++|++++|++ |.++++ ++.-....- +.+..
T Consensus 186 ~~~~~-~~~d--------~~~~a~v~vq~Pn~~-G~~ed~~~i~~~~h~~------gal~~~-~ad~~aL~~-l~~Pg-- 245 (429)
T PF02347_consen 186 PLDED-GTTD--------DDDTAAVMVQNPNTF-GVFEDIKEIADIAHAA------GALVIV-GADPNALGG-LKSPG-- 245 (429)
T ss_dssp -BBTT-CSB---------STTEEEEEEESS-TT-SB--THHHHHHHHHHT------T-EEEE-CGGCCGCCT-C--GG--
T ss_pred ccccc-CCcc--------ccCeEEEEeecCCCC-ceEeeHHHHHHHHHHc------CCEEEE-ecCHHHHhC-cCChh--
Confidence 98764 4555 678899999999866 9999999999999999 999888 766443221 22221
Q ss_pred cccCCCceEEEEcCcccCCc-----CCceEEEEEeCCCCcccccccc-----cCCCCCCC--------CC-------ccc
Q 011057 262 DFRLPLVKSINVSGHKYGLV-----YAGIGWVIWRNKEDLPEELIFH-----INYLGADQ--------PT-------FTL 316 (494)
Q Consensus 262 ~~~~~~~D~~~~~~hK~l~~-----p~g~G~~~~~~~~~~~~~~~~~-----~~y~~~~~--------~~-------~~~ 316 (494)
+ .|+|++..+ ||.++. ++++|++.+++. +.+.++-+ .+-.+... ++ ..-
T Consensus 246 e---~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~--l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSN 319 (429)
T PF02347_consen 246 E---YGADIVVGE-HQTFGIPMGFGGPGAGFFAVRED--LVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSN 319 (429)
T ss_dssp G---GT-SEEEEC-CTTTT---CCC-S--EEEEE-GG--GGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT-
T ss_pred h---cCccEEeeC-CCCCcccCCCCCCCeeeEEEhhh--hhhhCCCceecccccccccceeeeccccccccccccchhhh
Confidence 2 289999544 666544 456788888775 22222221 01001000 00 011
Q ss_pred ccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHH
Q 011057 317 NFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLR 396 (494)
Q Consensus 317 ~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (494)
-||..+..++..+..+.++|.+|++++.+++..+++|+.++|++..++.+ ..+....++.... . .....++.++..
T Consensus 320 IctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~-~~~~f~e~v~~~~-~--~~~~~~l~~~~~ 395 (429)
T PF02347_consen 320 ICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPF-DNPFFFEFVVVFS-K--DKEVEELLKRGI 395 (429)
T ss_dssp --SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECS-SSSSBSSEEEEES-S---HHHHHHHHTT-
T ss_pred hhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-CCCCceeeeeecC-C--cHHHHHHHHHHH
Confidence 13343444456777889999999999999999999999999999743332 2221223333332 1 112223444444
Q ss_pred hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHH
Q 011057 397 RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 397 ~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
..|+.. ..+ ....+-+|+++.+|++|||+|++.+
T Consensus 396 ~~gl~~---~~~----~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 396 EGGLNL---RYP----DDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp ---EEE---GGG-----SSEEEEE--TT--HHHHHHHHH--
T ss_pred hcCCCc---ccc----CCCeEEEEccCCCCHHHHHHHHhcC
Confidence 444221 111 1226779999999999999988754
No 234
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.83 E-value=4.3e-18 Score=172.81 Aligned_cols=337 Identities=12% Similarity=0.064 Sum_probs=205.7
Q ss_pred CCCCcccccccCC-ChHHHHHHHHHHhccc-----CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 55 NPRLNLASFVTTW-MEPECDKLMMAAINKN-----YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 55 ~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
.+.++++.+.+.. ++|.+.+++.+++... ...|...++...+++.+.+++.+. ++++ ..+++|+|+++
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~~~~-----d~I~it~Ga~~ 106 (402)
T TIGR03542 33 ADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-RIDP-----EEIFISDGAKC 106 (402)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-CCCH-----HHEEECCCcHH
Confidence 4445666655543 4567788877776542 123444567777777755554221 4544 45999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCC-----------eeEEEeccC-CccccCHHHHH
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEV-----------ELKEVKLSE-GYYVMDPVKAV 196 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~-----------~v~~v~~~~-~~~~~d~~~L~ 196 (494)
++... ..+.. .+++|+++.++|..+...++..|+ +++.+++++ +++..|+++
T Consensus 107 al~~l-~~l~~-------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-- 170 (402)
T TIGR03542 107 DVFRL-QSLFG-------------SDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-- 170 (402)
T ss_pred HHHHH-HHhcC-------------CCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc--
Confidence 98753 33311 125799999999999999999999 888898864 334455321
Q ss_pred HhhhhCCeEEEEeeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccc-cCCC---ce
Q 011057 197 EMVDENTICVAAILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF-RLPL---VK 269 (494)
Q Consensus 197 ~~i~~~t~~vv~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~---~D 269 (494)
.+++++|++++|+||||.+.+ +++|+++|+++ ++++++|++|+.+.. .+.....+ .... ..
T Consensus 171 ---~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~De~y~~~~~---~~~~~~~~~~~~~~~~~v 238 (402)
T TIGR03542 171 ---EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEH------GSLILFDAAYSAFIS---DPSLPHSIFEIPGAKECA 238 (402)
T ss_pred ---cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc------CeEEEEEchhhhhcc---CCCCCcchhhCCCCcccE
Confidence 146789999999999999976 78899999999 999999999987542 11101111 1111 23
Q ss_pred EEEEcCcccC-CcCCceEEEEEeCCCCccccc-ccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH---hHHHHHH
Q 011057 270 SINVSGHKYG-LVYAGIGWVIWRNKEDLPEEL-IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF---EGYRNVM 344 (494)
Q Consensus 270 ~~~~~~hK~l-~~p~g~G~~~~~~~~~~~~~~-~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~---~g~~~~~ 344 (494)
++..++.|.+ .++.++||+++... .+.... .....+..... .. .. ..+.+.+.++...+.. ..+.+..
T Consensus 239 i~~~SfSK~~g~pGlRiG~~i~~~~-l~~~~~~~~~~~~~~~~~--~~--~~--~~s~~~q~~~~~~l~~~~~~~~~~~~ 311 (402)
T TIGR03542 239 IEFRSFSKTAGFTGVRLGWTVVPKE-LTYADGHSVIQDWERRQC--TK--FN--GASYPVQRAAEAAYAGEGLQPILEAI 311 (402)
T ss_pred EEEecCccccCCCCcceEEEEecHH-HhhcchhhHHHHHHHHhh--hc--cc--CCCHHHHHHHHHHHcCcchhHHHHHH
Confidence 4456778977 58889999987543 210000 00000000000 00 00 1122334444444432 2234455
Q ss_pred HHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEecc
Q 011057 345 ENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIRE 423 (494)
Q Consensus 345 ~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~ 423 (494)
+.+.++++++.+.|++.+ +++..+. ..+++.+.++. .++..++++.|. +.|+.+....... ..+..++|+++..
T Consensus 312 ~~~~~~~~~~~~~L~~~~-~~~~~~~-~~~f~~v~l~~--~~~~~~l~~~l~~~~gv~v~pg~~f~-~~~~~~iRis~~~ 386 (402)
T TIGR03542 312 SYYMENARILRKALEAAG-FKVYGGE-HAPYLWVKTPE--GISSWDFFDFLLYQYHVVGTPGSGFG-PSGEGFVRFSAFG 386 (402)
T ss_pred HHHHHHHHHHHHHHHhcC-ceecCCC-ceeEEEEECCC--CCCHHHHHHHHHHhCCEEEeCchhhC-CCCCCEEEEEecC
Confidence 666778888999998875 7765432 45677777743 456778998877 5699875433221 2235689999753
Q ss_pred CCChHHHHHHHHHHHH
Q 011057 424 DFSRTLAERLVLDITK 439 (494)
Q Consensus 424 ~~t~~~id~~i~~l~~ 439 (494)
+.++++..++.|++
T Consensus 387 --~~~~l~~~l~~l~~ 400 (402)
T TIGR03542 387 --KRENIVEACERIKE 400 (402)
T ss_pred --CHHHHHHHHHHHHh
Confidence 55656555544443
No 235
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.83 E-value=2.7e-18 Score=173.22 Aligned_cols=322 Identities=17% Similarity=0.055 Sum_probs=196.4
Q ss_pred CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
+.+|.+.+++.+++.........+ ..+...++++++++++|.+. +++++||++|+..++.+++.....
T Consensus 43 ~~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~g~~~-------~~~~~sg~~a~~~a~~~~~~~~~~--- 110 (379)
T TIGR00707 43 HAHPKLVEALKEQLEKLVHVSNLY--YTEPQEELAEKLVEHSGADR-------VFFCNSGAEANEAALKLARKYTGD--- 110 (379)
T ss_pred CCCHHHHHHHHHHHhhcccccccc--CCHHHHHHHHHHHhhCCCCE-------EEEeCCcHHHHHHHHHHHHHHhhc---
Confidence 345888888888877543211112 23455667888999999863 899999999999998876532110
Q ss_pred hcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeE----EEeccCC-cc--ccCHHHHHHhhhhCCeEEEEeeCCCCcccc-
Q 011057 147 AEGKPFDKPNIVTGANVQVCWEKFARYFEVELK----EVKLSEG-YY--VMDPVKAVEMVDENTICVAAILGSTLNGEF- 218 (494)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~----~v~~~~~-~~--~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~- 218 (494)
.+..+++|+++++++..+...+...+.... ..++..+ .+ ..|+++|++.+.+++++|+++.+++++|..
T Consensus 111 ---~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~~ 187 (379)
T TIGR00707 111 ---KGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVNP 187 (379)
T ss_pred ---cCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCcc
Confidence 001125677666554333333333333221 1222211 01 128999999998888888887676677754
Q ss_pred ---cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccCCCceEEEEcCcccCCcCCceEEEEEeCCC
Q 011057 219 ---EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 294 (494)
Q Consensus 219 ---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~ 294 (494)
+++++|.++|+++ ++++++|++|.++.. ....... ..+. ..|.++ +.|.+.++.++|+++..++
T Consensus 188 ~~~~~l~~i~~l~~~~------~~~~i~De~~~~~~~--~g~~~~~~~~~~-~~d~~t--~sK~~~~G~riG~~~~~~~- 255 (379)
T TIGR00707 188 ASAEFLKALREICKDK------DALLIFDEVQTGIGR--TGKFFAYEHYGI-EPDIIT--LAKGLGGGVPIGATLAKEE- 255 (379)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--cchhhhHHhcCC-CCCEEE--EcccccCCcccEEEEEcHH-
Confidence 2489999999999 999999999975421 1110110 1111 245554 4688887788999886532
Q ss_pred CcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEe-ec-CCC
Q 011057 295 DLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV-SK-DEG 372 (494)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-~~~ 372 (494)
.+ ..+.. . ....+ ...+.....+..++|+.+.. .+..++..+++++++++|++++ .... .. +..
T Consensus 256 ~~-~~~~~----~---~~~~~--~~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~ 321 (379)
T TIGR00707 256 VA-EAFTP----G---DHGST--FGGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELG-KNYPNKEVRGK 321 (379)
T ss_pred HH-hhhcC----C---CCCCC--CCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHH-hhCCCCccccC
Confidence 22 21111 0 00011 12223445556666665543 2456777788888888887753 2221 11 113
Q ss_pred ccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 373 VPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
.+++.+.+.. +..++.++|.++|+.+.. .+..++|++++..++.++++++++.|+++
T Consensus 322 g~~~~~~~~~----~~~~~~~~l~~~Gv~v~~-------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 322 GLMLGIELEA----PCKDIVKKALEKGLLVNC-------AGPKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred ceEEEEEecC----cHHHHHHHHHHCCcEEee-------CCCCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 4566777643 357899999999998743 12357999988778999999988888765
No 236
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.83 E-value=5.9e-19 Score=177.07 Aligned_cols=283 Identities=20% Similarity=0.163 Sum_probs=184.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchH----HHHHHHH
Q 011057 98 NRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVC----WEKFARY 173 (494)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~ 173 (494)
.++++.+++++|.+. ++++++|++|+..++.++... +++|+++...|.. +...+..
T Consensus 57 ~~le~~la~l~g~~~-------~~~~~sG~~Ai~~al~al~~~-------------Gd~Vl~~~~~~~~t~~~~~~~~~~ 116 (380)
T TIGR01325 57 AAFEERIAALEGAER-------AVATATGMSAIQAALMTLLQA-------------GDHVVASRSLFGSTVGFISEILPR 116 (380)
T ss_pred HHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhCC-------------CCEEEEecCCcchHHHHHHHHHHH
Confidence 345566999999864 788999999999888766321 2578888777753 4456677
Q ss_pred cCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccccccccc
Q 011057 174 FEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAP 253 (494)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (494)
.|++++.++.+ |++++++++++++++|++..++||+|.+.|+++|.++|+++ |++++||++|+.+..
T Consensus 117 ~g~~v~~v~~~------d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~------gi~livD~a~~~~~~- 183 (380)
T TIGR01325 117 FGIEVSFVDPT------DLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAI------GALLVVDNVFATPVL- 183 (380)
T ss_pred hCCEEEEECCC------CHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHc------CCEEEEECCCccccc-
Confidence 89998888742 68899999988999999999999999999999999999999 999999999976432
Q ss_pred ccCCcccccccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 254 FLYPELEWDFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 254 ~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
..+ . . .++|+++.+++|++.++. ..|.+++.++..+ +.+.. +.... +.. .....+|.++
T Consensus 184 -~~p-l--~---~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~-~~l~~---~~~~~-------g~~--~~p~~a~~~l 243 (380)
T TIGR01325 184 -QQP-L--K---LGADVVVYSATKHIDGQGRVMGGVIAGSEELM-AEVAV---YLRHT-------GPA--MSPFNAWVLL 243 (380)
T ss_pred -CCc-h--h---hCCCEEEeeccceecCCCCeEEEEEEeCHHHH-HHHHH---HHHhh-------CCC--CCHHHHHHHH
Confidence 111 1 1 268999999999997653 3434444443322 11111 11000 111 1112233333
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEE-eecC---------------CCccEEEEEecCCCCCCHHHHHHHHH
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNI-VSKD---------------EGVPLVAFSLKDNKRHDEFEVAELLR 396 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~-~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (494)
+ +.+.+..++++..+++.++.+.|+++|+++- ..+. ...++++|.+++ ......+.+.|.
T Consensus 244 ~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~--~~~~~~f~~~l~ 319 (380)
T TIGR01325 244 K--GLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVAD--RAAAWKVLDAVE 319 (380)
T ss_pred h--ccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECC--HHHHHHHHHcCC
Confidence 3 3445567888889999999999999987653 3221 024589999852 112345555553
Q ss_pred hc--Ccee----eccccCCC--------------CCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 397 RF--GWIV----PAYTMPAD--------------AQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 397 ~~--Gi~v----~~~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
-- +... +....|.. .-..+.+|+|++- |+.+.++++|++++
T Consensus 320 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al 380 (380)
T TIGR01325 320 LVSITNNLGDAKSTITHPATTTHGRMQPEERAAAGIGDGLVRLSVGL----EDVDDLIADLKRAL 380 (380)
T ss_pred cceEcccCCCCCeeeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHhhC
Confidence 21 1111 00001110 0113589999985 77888888888763
No 237
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.83 E-value=1.4e-17 Score=170.50 Aligned_cols=334 Identities=16% Similarity=0.046 Sum_probs=222.5
Q ss_pred HHHHHHHHHHhccc----CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 011057 70 PECDKLMMAAINKN----YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKR 145 (494)
Q Consensus 70 p~~~~~~~~~~~~~----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~ 145 (494)
..+.+.+...+... ...+....+..++.+.+.+++....|...+. ..+++|+|+++|+.+.+....+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~---~~IiiT~G~q~al~l~~~~l~~------ 177 (459)
T COG1167 107 EALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEP---EQIVITSGAQQALDLLLRLLLD------ 177 (459)
T ss_pred HHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCc---CeEEEeCCHHHHHHHHHHHhCC------
Confidence 45666666665432 2345555789999999999998777887632 3699999999999988777743
Q ss_pred HhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh-CCeEEEE-eeCCCCcccccCH--
Q 011057 146 KAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAA-ILGSTLNGEFEDV-- 221 (494)
Q Consensus 146 ~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~-~~~~~~tG~~~~l-- 221 (494)
.++.|++.+++|.....+.+.+|++++.||+|++ .+|+|+|++.+.. +++++++ ....||||...++
T Consensus 178 -------pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~--G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~r 248 (459)
T COG1167 178 -------PGDTVLVEDPTYPGALQALEALGARVIPVPVDED--GIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLER 248 (459)
T ss_pred -------CCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCC--CCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHH
Confidence 1368999999999999999999999999999975 5999999999986 3555544 4577899999776
Q ss_pred -HHHHHHHHHhhcccCCCceEEEecccccccccccCCccc--ccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCccc
Q 011057 222 -KLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE--WDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPE 298 (494)
Q Consensus 222 -~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~ 298 (494)
++|.++|++| ++|++.|..|+.+.. ..+... ..+...+--++..++.|.+.++.++||++.... .+ +
T Consensus 249 R~~Ll~lA~~~------~~~IIEDD~y~el~~--~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~-~~-~ 318 (459)
T COG1167 249 RKALLALAEKY------DVLIIEDDYYGELRY--DGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPE-LI-E 318 (459)
T ss_pred HHHHHHHHHHc------CCeEEeeCcchhhhc--CCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHH-HH-H
Confidence 5799999999 999999999997643 211111 111223455666788999999999999987542 21 1
Q ss_pred ccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc--HhHHHHHHHHHHHHHHHHHHHHhhCCC-eEEeecCCCccE
Q 011057 299 ELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--FEGYRNVMENCHENAMVLKEGLEKTGR-FNIVSKDEGVPL 375 (494)
Q Consensus 299 ~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~--~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~~~~~~~~~ 375 (494)
.+....... . ...+...-..+..-+. -| ..-++++++.+.+.++.+.+.|.+..+ ...+..+...-+
T Consensus 319 ~~~~~k~~~-~--------~~~s~~~Q~~la~~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~f 388 (459)
T COG1167 319 KLLRLKQAA-D--------LGPSSLSQAALAAFLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLF 388 (459)
T ss_pred HHHHHHHHh-c--------CCCChHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEE
Confidence 111100000 0 1111111122222222 22 233455555666778889999988752 223333323345
Q ss_pred EEEEecCCCCCCHHHHHHHHHhcCceeec--cccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 376 VAFSLKDNKRHDEFEVAELLRRFGWIVPA--YTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 376 v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~--~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
+.+.++ .+++...+.+++.++|+.+.. ..+.........+|++++. .+.+++++.++.|.+++.+.
T Consensus 389 lwl~l~--~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~-~~~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 389 LWLELP--EGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS-PSEEEIEEGIKRLAALLREA 456 (459)
T ss_pred EEEEcC--CCCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCC-CCHHHHHHHHHHHHHHHHHH
Confidence 556663 357888999999999998743 2222222245689999985 45777887777777776654
No 238
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.83 E-value=2.9e-18 Score=173.02 Aligned_cols=287 Identities=14% Similarity=0.102 Sum_probs=186.7
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchH----HHHHHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVC----WEKFARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~ 174 (494)
++++.+++++|.+. .+++++|+.|+.+++.+... .+++|+++.+.|.. +...+...
T Consensus 69 ~le~~lA~l~g~~~-------~i~~~sG~~Al~~~l~~ll~-------------~Gd~Viv~~~~y~~t~~~~~~~~~~~ 128 (403)
T PRK07503 69 LLEQRMASLEGGEA-------AVALASGMGAITATLWTLLR-------------PGDEVIVDQTLYGCTFAFLHHGLGEF 128 (403)
T ss_pred HHHHHHHHHhCCCc-------EEEEcCHHHHHHHHHHHHcC-------------CCCEEEEccCccchHHHHHHHHHhhC
Confidence 35566999999864 67788899998877765522 12689988887753 33455678
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++. .|+++++++++++|++|++.+++||+|.+.|+++|+++|+++ |+++++|++|+.+..
T Consensus 129 G~~v~~vd~------~d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~------gi~lIvD~a~a~~~~-- 194 (403)
T PRK07503 129 GVTVRHVDL------TDPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGA------GAKVVVDNTYCTPYL-- 194 (403)
T ss_pred CEEEEEeCC------CCHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 888888874 268999999998999999999999999999999999999999 999999999986432
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccc--cCCCCCCCCCcccccCcchHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFH--INYLGADQPTFTLNFSKGSSQVIAQYY 330 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~--~~y~~~~~~~~~~~~s~~~~~~~a~~~ 330 (494)
... +. .++|+++.|++|+++++.+ .|+++ .++... ..+... ..+. +.. ...+.+|.
T Consensus 195 -~~~----l~-~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~-~~l~~~~~~~~~----------g~~--~s~~~a~l 254 (403)
T PRK07503 195 -QRP----LE-LGADLVVHSATKYLGGHGDITAGLVV-GGKALA-DRIRLEGLKDMT----------GAV--MSPFDAFL 254 (403)
T ss_pred -CCc----hh-hCCCEEEccccccccCCCceeEEEEE-cCHHHH-HHHHhhhHHhCc----------CCC--CCHHHHHH
Confidence 111 11 2689999999999986543 56665 444322 211100 0011 111 12223344
Q ss_pred HHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEe-ecCC---------------CccEEEEEecCCCCCCHHHHHHH
Q 011057 331 QLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV-SKDE---------------GVPLVAFSLKDNKRHDEFEVAEL 394 (494)
Q Consensus 331 al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~---------------~~~~v~f~~~~~~~~~~~~l~~~ 394 (494)
.++ +.+.+..++++..+++..+.+.|++.|.++.+ .|.- ..++++|.+++. ......+.+.
T Consensus 255 ~l~--~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~-~~~~~~~~~~ 331 (403)
T PRK07503 255 LMR--GLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGG-IAAGRRFMNA 331 (403)
T ss_pred HHc--CcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCC-HHHHHHHHHh
Confidence 443 33455677788889999999999998876533 2210 245888888531 0112334333
Q ss_pred HHh--cCceee---c-cccCCC-----C---------CCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 395 LRR--FGWIVP---A-YTMPAD-----A---------QHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 395 L~~--~Gi~v~---~-~~~~~~-----~---------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
|.- .+.... + ...|.. . -..+.+|+|++- |+++.++++|+++++....
T Consensus 332 l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~Al~~~~~ 399 (403)
T PRK07503 332 LQLFARAVSLGDAESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGL----EDVADILADLAQALDACAV 399 (403)
T ss_pred CCcceeecccCCCCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEec----CCHHHHHHHHHHHHHHHHH
Confidence 321 121110 0 001100 0 013579999985 7888999999999987654
No 239
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.83 E-value=8.5e-18 Score=170.23 Aligned_cols=336 Identities=15% Similarity=0.053 Sum_probs=206.5
Q ss_pred hcCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++ .-.+.+|.+.+++.+.++........ ...+...++.+.|+++.+.+ ...++++|+
T Consensus 37 ~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~-------~~~~~~SGs 107 (396)
T PRK04073 37 PEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRA--FHSDQLGPWYEKVAKLTGKD-------MVLPMNTGA 107 (396)
T ss_pred CCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccc--cCCHHHHHHHHHHHhcCCCC-------eEEEcCChH
Confidence 356655544332 23346799999998888753321111 12233345667788887654 388999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCCe------------eEEEeccCCccccCHHH
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEVE------------LKEVKLSEGYYVMDPVK 194 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~ 194 (494)
+|+..+++.++..+... .|....+.+|+ .....|.....+....+.. +..++ ..|+++
T Consensus 108 eA~e~Alk~a~~~~~~~---~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~ 178 (396)
T PRK04073 108 EAVETAIKAARRWAYDV---KGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIP------YGDLEA 178 (396)
T ss_pred HHHHHHHHHHHHHhhhc---cCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeC------CCCHHH
Confidence 99999999887542111 12111234555 4556777665555444321 12222 127899
Q ss_pred HHHhhhhCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceE
Q 011057 195 AVEMVDENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKS 270 (494)
Q Consensus 195 L~~~i~~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~ 270 (494)
+++++++++++|++..+++++|.+.| +++|.++|+++ |+++++|++|.++.. .......+......|.
T Consensus 179 l~~~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~------g~lli~DEv~~g~g~--~g~~~~~~~~~~~pdi 250 (396)
T PRK04073 179 LKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEE------NVLFIADEIQTGLGR--TGKLFACDWDNVTPDM 250 (396)
T ss_pred HHHhcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEecchhCCCc--CcHHHHhhhcCCCCCE
Confidence 99999888888888888899999865 89999999999 999999999986421 1110111111123677
Q ss_pred EEEcCcccCCcC-CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHH
Q 011057 271 INVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHE 349 (494)
Q Consensus 271 ~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~ 349 (494)
+++ .|.+..+ ..+|+++.+++ .. +.+. ......++ ..+.....+..++|+.+.++ ...++..+
T Consensus 251 ~~~--sK~lg~gg~~ig~~~~~~~-i~-~~~~-------~~~~~~t~--~~~~~~~aaa~aaL~~~~~~---~l~~~~~~ 314 (396)
T PRK04073 251 YIL--GKALGGGVFPISCVAANRD-IL-GVFT-------PGSHGSTF--GGNPLACAVSIAALEVLEEE---KLPERSLE 314 (396)
T ss_pred EEe--cccccCCCCcceEEEEcHH-HH-hhhc-------CCCCCCCC--CCCHHHHHHHHHHHHHHHhc---CHHHHHHH
Confidence 765 4876554 67888876542 22 1111 00011111 11223334444555555443 34566677
Q ss_pred HHHHHHHHHhhCCCeEEeec-CCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChH
Q 011057 350 NAMVLKEGLEKTGRFNIVSK-DEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRT 428 (494)
Q Consensus 350 ~a~~l~~~L~~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~ 428 (494)
+.++|.+.|++++ ...+.. +....++.+.+.. +..++.++|.++|+++.. .+..++|++....+|++
T Consensus 315 ~~~~l~~~L~~l~-~~~i~~~~~~g~~~~~~~~~----~~~~~~~~l~~~Gv~~~~-------~~~~~iRi~p~l~~t~e 382 (396)
T PRK04073 315 LGEYFKEQLKEID-NPMIKEVRGRGLFIGVELNE----PARPYCEALKEEGLLCKE-------THETVIRFAPPLVITKE 382 (396)
T ss_pred HHHHHHHHHHhhc-CCcccceecceEEEEEEecc----hHHHHHHHHHHCCeEEec-------CCCCEEEEECCcccCHH
Confidence 8999999998874 221211 1134566666632 467899999999998642 12357999987788999
Q ss_pred HHHHHHHHHHHHH
Q 011057 429 LAERLVLDITKVL 441 (494)
Q Consensus 429 ~id~~i~~l~~~~ 441 (494)
+++++++.|++++
T Consensus 383 ~i~~~~~~l~~~l 395 (396)
T PRK04073 383 ELDWAFEKIKAVL 395 (396)
T ss_pred HHHHHHHHHHHHh
Confidence 9999998888764
No 240
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.83 E-value=9.3e-19 Score=177.73 Aligned_cols=309 Identities=13% Similarity=0.021 Sum_probs=194.7
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCccee--eecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCC
Q 011057 85 VDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGV--GTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGAN 162 (494)
Q Consensus 85 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~--~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~ 162 (494)
..|....|..++++.+.+|+.+..+.+.+ ...++ .|.|+++|+.+++.++..-. ..+++|+++++
T Consensus 66 ~~Y~~~~G~~~lR~aia~~~~~~~~~~~~---~~~v~~~~t~G~~~al~~~~~~l~~~~----------~~Gd~Vlv~~P 132 (404)
T PTZ00376 66 KEYLPIEGLQSFIEAAQKLLFGEASYALA---EKRIATVQALSGTGALRLGFEFLKRFL----------PAGTTVYVSNP 132 (404)
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCCccccc---cCeEEEeeccCcchHHHHHHHHHHHhc----------CCCCEEEEcCC
Confidence 45666678889988888877554332211 12354 58899999887765432110 01368999999
Q ss_pred cchHHHHHHHHcCCeeEEEecc-CCccccCHHHHHHhhh---hCCeEEEEeeCCCCcccccC---HHHHHHHHHHhhccc
Q 011057 163 VQVCWEKFARYFEVELKEVKLS-EGYYVMDPVKAVEMVD---ENTICVAAILGSTLNGEFED---VKLLNDLLAEKNKET 235 (494)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~L~~~i~---~~t~~vv~~~~~~~tG~~~~---l~~I~~la~~~~~~~ 235 (494)
+|+.+...++..|++++.+++. ++++.+|++.+++++. ++++++++++++||||.+.+ +++|+++|++|
T Consensus 133 ~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~---- 208 (404)
T PTZ00376 133 TWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRK---- 208 (404)
T ss_pred CchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC----
Confidence 9999999999999999999984 3347899999999885 34577778999999999954 66788889999
Q ss_pred CCCceEEEecccccccccccCCcc--cccc-c-CCCceEEEEcCcccCC-cCCceEEEE--EeCCCCcccccccccCCCC
Q 011057 236 GWDTPIHVDAASGGFIAPFLYPEL--EWDF-R-LPLVKSINVSGHKYGL-VYAGIGWVI--WRNKEDLPEELIFHINYLG 308 (494)
Q Consensus 236 ~~~~~l~vD~a~~~~~~~~~~~~~--~~~~-~-~~~~D~~~~~~hK~l~-~p~g~G~~~--~~~~~~~~~~~~~~~~y~~ 308 (494)
++++++|++|..+......... ...+ . .+++ ++..++.|.+. ++.++||++ +.++............+..
T Consensus 209 --~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~v-i~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~ 285 (404)
T PTZ00376 209 --NLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEF-LVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIR 285 (404)
T ss_pred --CcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcE-EEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 9999999999875421000000 0011 1 1122 44557778776 789999985 3343221110000000000
Q ss_pred CCCCCcccccCcchHHHHHHHHHHHHhcHhH--------HHHHHHHHHHHHHHHHHHHhhCC---CeEEeecCCCccEEE
Q 011057 309 ADQPTFTLNFSKGSSQVIAQYYQLIRLGFEG--------YRNVMENCHENAMVLKEGLEKTG---RFNIVSKDEGVPLVA 377 (494)
Q Consensus 309 ~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g--------~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~~v~ 377 (494)
.. . .. .+.+++.++...+.... +++..+++.++++.+.+.|++.+ ++....+ ..+++.
T Consensus 286 ~~-----~-~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p--~gg~f~ 354 (404)
T PTZ00376 286 PM-----Y-SS---PPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIIN--QIGMFS 354 (404)
T ss_pred hh-----c-CC---CchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccc--CceEEE
Confidence 00 0 01 12334455555443211 33445567788889999999874 2333333 345555
Q ss_pred EEecCCCCCCHHHHHHHHHhc-CceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 378 FSLKDNKRHDEFEVAELLRRF-GWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 378 f~~~~~~~~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
|.- ++ .+++++|.++ |+.+ .|. + |++++. .+.++++.+++.|+++++
T Consensus 355 ~~~-----~~-~~~~~~L~~~~~v~v----~p~---~----Ris~~~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 355 FTG-----LT-KEQVERLIEKYHIYL----LDN---G----RISVAG-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred ecC-----CC-HHHHHHHHHhCCEee----cCC---C----eEEEec-cCHHhHHHHHHHHHHHHh
Confidence 431 12 4788888877 8764 221 1 999964 678889999999988765
No 241
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.83 E-value=4.4e-18 Score=173.80 Aligned_cols=316 Identities=13% Similarity=0.065 Sum_probs=198.8
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHH
Q 011057 88 DEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCW 167 (494)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~ 167 (494)
..+.|...+++.+.+++.+.+|..... +...+++|+|+++|+.+.+.++.+. ++.|+++.+.|..+
T Consensus 92 ~~~~G~~~LR~aiA~~l~~~~~~~~~v-~p~~Ivit~G~t~al~~l~~~l~~p-------------GD~Vlv~~P~Y~~f 157 (447)
T PLN02607 92 QDYHGLKSFRQAMASFMEQIRGGKARF-DPDRIVLTAGATAANELLTFILADP-------------GDALLVPTPYYPGF 157 (447)
T ss_pred CCCcchHHHHHHHHHHHHHhcCCCCCc-CHHHeEEcCChHHHHHHHHHHhCCC-------------CCEEEEcCCCCcch
Confidence 334577888888888888877632110 1246889999999998777666321 26799999999988
Q ss_pred HHHHH-HcCCeeEEEeccC-CccccCHHHHHHhhhh------CCeEEEEeeCCCCcccccC---HHHHHHHHHHhhcccC
Q 011057 168 EKFAR-YFEVELKEVKLSE-GYYVMDPVKAVEMVDE------NTICVAAILGSTLNGEFED---VKLLNDLLAEKNKETG 236 (494)
Q Consensus 168 ~~~~~-~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~------~t~~vv~~~~~~~tG~~~~---l~~I~~la~~~~~~~~ 236 (494)
...+. ..|++++.|++++ +++.+|++++++++.+ ++++|++++|+||||.+.+ +++|.++|+++
T Consensus 158 ~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~----- 232 (447)
T PLN02607 158 DRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRK----- 232 (447)
T ss_pred HHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHC-----
Confidence 77666 4799999998873 4467999999998875 6788999999999999966 67888899999
Q ss_pred CCceEEEecccccccccccCCccc----c--cc---c-CCCceEEEEcCcccC-CcCCceEEEEEeCCCCcccccccccC
Q 011057 237 WDTPIHVDAASGGFIAPFLYPELE----W--DF---R-LPLVKSINVSGHKYG-LVYAGIGWVIWRNKEDLPEELIFHIN 305 (494)
Q Consensus 237 ~~~~l~vD~a~~~~~~~~~~~~~~----~--~~---~-~~~~D~~~~~~hK~l-~~p~g~G~~~~~~~~~~~~~~~~~~~ 305 (494)
++++++|++|+.... ..+... . .. . .+.+.++ .+..|-+ .++.++|+++..++... ..+.....
T Consensus 233 -~i~lI~DEiYa~~~f--~~~~f~S~~s~~~~~~~~~~~~~v~vi-~s~SK~fg~~GlRvG~ivs~n~~l~-~~~~~~~~ 307 (447)
T PLN02607 233 -NIHLVSDEIYSGSVF--SASEFVSVAEIVEARGYKGVAERVHIV-YSLSKDLGLPGFRVGTIYSYNDKVV-TTARRMSS 307 (447)
T ss_pred -CCEEEEecccccccc--CCCCcccHHHHHhhcCCCCCcCcEEEE-EcchhcCCCCcceEEEEEEcCHHHH-HHHHHHhh
Confidence 999999999987432 111100 0 00 0 1234343 4667755 58889999987543222 11111111
Q ss_pred CCCCCCCCcccccCcchHHHHHHHHHHHHhcHh-----HHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEe
Q 011057 306 YLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFE-----GYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSL 380 (494)
Q Consensus 306 y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~-----g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~ 380 (494)
|. . .+...+.++..++... -+++..+++.+..+.+.+.|++.+ ++...+. ...++.+++
T Consensus 308 ~~-----------~---~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~g-i~~~~~~-ag~fvw~~L 371 (447)
T PLN02607 308 FT-----------L---VSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAG-IECLKGN-AGLFCWMNL 371 (447)
T ss_pred cC-----------C---CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcccCC-eeEEEEEEc
Confidence 10 0 1112233334444332 234555666777788999999875 6654432 334555665
Q ss_pred cCC--CC--CCHHHHHHHHHh-cCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 381 KDN--KR--HDEFEVAELLRR-FGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 381 ~~~--~~--~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
... .. ....++.++|.+ .|+.+....... ....+++|++++. ..++.++..++.|.++++.-+
T Consensus 372 ~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~-~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~~~ 439 (447)
T PLN02607 372 SPLLETPTREGELALWDSILREVKLNISPGSSCH-CSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDRRK 439 (447)
T ss_pred hHhhcCCCchhHHHHHHHHHHhCCEEEcCccccC-CCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHHH
Confidence 321 00 113467777765 699875433211 1235689999984 345666666666666655433
No 242
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.83 E-value=4e-18 Score=170.65 Aligned_cols=284 Identities=19% Similarity=0.086 Sum_probs=187.5
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHH----HHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKF----ARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~----~~~~ 174 (494)
+++++++++.|.+. +++|+||++|+.+++.++... +++|+++.+.|...... +...
T Consensus 55 ~le~~lA~l~g~~~-------v~~~~gg~~Ai~~~l~all~~-------------GD~Vl~~~p~y~~~~~~~~~~~~~~ 114 (382)
T TIGR02080 55 LLQQALAELEGGAG-------AVVTNTGMSAIHLVTTALLGP-------------DDLLVAPHDCYGGTYRLLNALAKKG 114 (382)
T ss_pred HHHHHHHHHhCCCc-------EEEEcCHHHHHHHHHHHHcCC-------------CCEEEEcCCCcHHHHHHHHHHHhhc
Confidence 35566999998542 889999999999888776321 26899999998754432 2223
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|+++..++ ..|+++++++++++|++|++++++||||.+.|+++|+++|+++ ++++++|++|+.+..
T Consensus 115 ~~~v~~~d------~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~------g~~vvvD~a~~~~~~-- 180 (382)
T TIGR02080 115 CFRVLFVD------QGDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAV------GAVVVVDNTFLSPAL-- 180 (382)
T ss_pred CeEEEEEC------CCCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 44555443 2478999999998999999999999999999999999999999 999999999976532
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
..+ +. .++|++..+++||+.++.+ .|+++++++... +.+.....+.+.. ...+..|..+
T Consensus 181 ~~p-----l~-~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~-~~l~~~~~~~g~~------------~sp~~a~l~l 241 (382)
T TIGR02080 181 QNP-----LA-LGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVA-EELAWWANNLGVT------------GGAFDSYLTL 241 (382)
T ss_pred CCc-----hh-hCCCEEEeecceeccCCCCceeEEEEeCCHHHH-HHHHHHHHccCCC------------CCHHHHHHHH
Confidence 111 11 2679999999999987776 577666554332 2211111222111 1223344444
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCCCCCCHHHHHHHHH
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDNKRHDEFEVAELLR 396 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (494)
+ +.+.+..++++..+++..+.+.|++.|.++ +..|. ...++++|.+++. ......+.+.|.
T Consensus 242 r--~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-~~~~~~f~~~l~ 318 (382)
T TIGR02080 242 R--GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGG-EQTVRRFLGGLS 318 (382)
T ss_pred c--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCc-HHHHHHHHHcCC
Confidence 3 444566778888899999999999998776 33332 0245999998531 111234555544
Q ss_pred hcCceee-----c-cccCCC-----C-------C--CceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 397 RFGWIVP-----A-YTMPAD-----A-------Q--HITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 397 ~~Gi~v~-----~-~~~~~~-----~-------~--~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
--.+.++ + ...|.. . . ..+.+|+|++- |+.+.++++|+++++
T Consensus 319 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~dl~~dl~~al~ 380 (382)
T TIGR02080 319 LFTLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGL----EDADDLIADLEQGLR 380 (382)
T ss_pred cceEeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 2111110 0 001110 0 0 13579999985 778888999998876
No 243
>PRK06460 hypothetical protein; Provisional
Probab=99.83 E-value=3.5e-18 Score=170.97 Aligned_cols=285 Identities=17% Similarity=0.124 Sum_probs=182.4
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCc----chHHHHHHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANV----QVCWEKFARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~----h~s~~~~~~~~ 174 (494)
++++.+|+++|.+. .+++++|++|+..++.++... +++|+++.+. +..+...++..
T Consensus 49 ~L~~~lA~l~g~~~-------~v~~~sG~~ai~~~l~al~~~-------------Gd~Vl~~~~~~~~ty~~~~~~~~~~ 108 (376)
T PRK06460 49 ELTKKIVELENAEM-------GVAFSSGMGAISTTALALLKP-------------GNSVLVHRDMFGRSYRFFTDYLKNW 108 (376)
T ss_pred HHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHHhCC-------------CCEEEEecCCcCcHHHHHHHHHHhh
Confidence 34455999999864 556677788888777665321 2578887643 34556677888
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++.++ .+.+++.+++++++|++++++||+|.+.|+++|+++|+++ ++++++|++|+.+..
T Consensus 109 G~~v~~~~~~~------~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~------g~~vivDea~~~~~~-- 174 (376)
T PRK06460 109 GVNVDASNPGS------DNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKEN------GSILIVDATFSTPIN-- 174 (376)
T ss_pred CcEEEEECCCC------HHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECCcCcccc--
Confidence 99988887543 2345555667899999999999999999999999999999 999999999976421
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
..+ + ..++|++..+++|++.++.+ .|+++. ++... +.+.......+ ... ....+|.++
T Consensus 175 ~~~-----l-~~~~divv~S~sK~l~G~~~~~~G~~~~-~~~l~-~~l~~~~~~~g---------~~~---~~~~a~~~l 234 (376)
T PRK06460 175 QKP-----L-ELGADIVVHSASKFLAGHNDVIAGLAAG-YGKLL-NVIDQMRRTLG---------TSL---DPHAAYLTL 234 (376)
T ss_pred CCh-----h-hcCCCEEEeecceeccCCCCceEEEEec-CHHHH-HHHHHHHHhcC---------CCC---CHHHHHHHH
Confidence 111 1 12579999999999865432 576654 33322 22111111111 111 112234433
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCCCCCCHHHHHHHHH
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDNKRHDEFEVAELLR 396 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (494)
+ +.+.++.++++..+++.++.+.|++.|.++ +..+. ...++++|.+++. ..+...+.+.|.
T Consensus 235 ~--~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~-~~~~~~~~~~l~ 311 (376)
T PRK06460 235 R--GIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGG-QESALKVMKSLK 311 (376)
T ss_pred h--chhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCc-HHHHHHHHHhCC
Confidence 3 446677888999999999999999998765 33331 1356999998642 112345555543
Q ss_pred h--cCcee----eccccCCC--------------CCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 397 R--FGWIV----PAYTMPAD--------------AQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 397 ~--~Gi~v----~~~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
- .+... +....|.. .-..+.+|+|++- |+.+.+++||+++++.+
T Consensus 312 ~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 312 LIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGI----EDVNDLIEDLDRALSTL 375 (376)
T ss_pred cceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 1 11100 00001110 0124579999985 78888999999998754
No 244
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.82 E-value=8.2e-19 Score=174.32 Aligned_cols=287 Identities=19% Similarity=0.162 Sum_probs=184.3
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHH
Q 011057 91 PVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKF 170 (494)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~ 170 (494)
|...++| +.++++.|.+. +++++||++|+.+++..+ . . +++||++...+......
T Consensus 54 p~~~~le----~~lA~leg~~~-------~v~~~sG~aAi~~~l~~l-~--------~-----GD~VI~~~~~yg~~~~~ 108 (364)
T PRK07269 54 PTRAKLE----ETLAAIESADY-------ALATSSGMSAIVLAFSVF-P--------V-----GSKVVAVRDLYGGSFRW 108 (364)
T ss_pred ccHHHHH----HHHHHHhCCCe-------EEEeCCHHHHHHHHHHHh-C--------C-----CCEEEEecCCcCchHHH
Confidence 4555555 45899888754 899999999998777432 2 1 26788887766533332
Q ss_pred HHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccc
Q 011057 171 ARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGF 250 (494)
Q Consensus 171 ~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~ 250 (494)
.....-.. .+.++ +..|+++++++++++|++|++.+|+||+|.+.|+++|+++|+++ |+++++|++++..
T Consensus 109 ~~~~~~~~-~~~~~---~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~------gi~vvvD~t~~~~ 178 (364)
T PRK07269 109 FNQQEKEG-RFHFT---YANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAK------GAKVIVDNTFYSP 178 (364)
T ss_pred HHHHHhcC-cEEEE---ecCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHc------CCEEEEECCCccc
Confidence 22110000 11111 34689999999999999999999999999999999999999999 9999999998653
Q ss_pred cccccCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHH
Q 011057 251 IAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQ 328 (494)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~ 328 (494)
.. ..+ . ..++|+++.|.+|++.++.. .|+++++++... +.+.....+. |.. .+....
T Consensus 179 ~~--~~p-l-----~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~-~~~~~~~~~~----------G~~--~s~~~a 237 (364)
T PRK07269 179 IY--QRP-I-----ELGADIVLHSATKYLSGHNDVLAGVVVTNDLELY-EKLFYNLNTT----------GAV--LSPFDS 237 (364)
T ss_pred cc--CCc-h-----hhCCcEEEecCceeccCCCcccceEEEeCcHHHH-HHHHHHHHHh----------CCC--CCHHHH
Confidence 21 111 1 13799999999999987665 466665554322 2111111111 111 122334
Q ss_pred HHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCcee-----
Q 011057 329 YYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIV----- 402 (494)
Q Consensus 329 ~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v----- 402 (494)
|.+++ +-..+..++++..+++.++.+.|++.|.++ ++.++ ..++++|.+.+. .....+.+.|.-..+..
T Consensus 238 ~l~~~--~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg-~gg~~sf~~~~~--~~~~~f~~~l~~~~~~~slG~~ 312 (364)
T PRK07269 238 YLLMR--GLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG-KGGMISFKVADE--TRIPHILNSLKVFTFAESLGGV 312 (364)
T ss_pred HHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC-cCcEEEEEECCH--HHHHHHHHhCCcceEccCCCCc
Confidence 43433 344577889999999999999999998765 44455 678999998431 12334444443221111
Q ss_pred -eccccCCCC--------------CCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 403 -PAYTMPADA--------------QHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 403 -~~~~~~~~~--------------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
+....|... -....+|+|++- |+++.+++||+++++
T Consensus 313 ~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGl----E~~~dli~dl~~al~ 363 (364)
T PRK07269 313 ESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGI----EDARDLIADLKQALE 363 (364)
T ss_pred CeEeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHhc
Confidence 001111100 113589999985 778888999998774
No 245
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.82 E-value=4.6e-18 Score=152.14 Aligned_cols=299 Identities=15% Similarity=0.077 Sum_probs=211.9
Q ss_pred HHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEE
Q 011057 101 VNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKE 180 (494)
Q Consensus 101 ~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~ 180 (494)
.+.|++++|++. +-+|.|+-+|-+..+.++..+ ++-|+++..+|++..-+++..|+++..
T Consensus 67 ~~dlaeFlg~D~-------~R~t~GARe~KfavMhal~~~-------------gd~vV~D~~aHYttyvAAEragl~v~e 126 (382)
T COG1103 67 LEDLAEFLGMDE-------VRVTAGAREAKFAVMHALCKE-------------GDWVVVDSLAHYTTYVAAERAGLNVAE 126 (382)
T ss_pred HHHHHHHhCCce-------eeecccchhhHHHHHHHhccC-------------CCEEEEcCcchHHHHHHHHhcCCeEEe
Confidence 334999999986 788999999999888877442 267999999999999999999999999
Q ss_pred EeccC-CccccCHHHHHHhhhh-------CCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccc
Q 011057 181 VKLSE-GYYVMDPVKAVEMVDE-------NTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIA 252 (494)
Q Consensus 181 v~~~~-~~~~~d~~~L~~~i~~-------~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~ 252 (494)
||... ..+.++++...+.|++ .+.+.++|++....|.+.|.+.++++|+++ ++++++.+||..+.+
T Consensus 127 Vp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~------gvPlllN~AYt~Grm 200 (382)
T COG1103 127 VPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREY------GVPLLLNCAYTVGRM 200 (382)
T ss_pred cCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHc------CCceEeecceeeccc
Confidence 99652 2478999888777753 256778899999999999999999999999 999999999998876
Q ss_pred cccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 253 PFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 253 ~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
|... ...++|+++.|+||.+.+...+|++-++.. +....+...-.+...... -.+.+|..+..++.+.+++
T Consensus 201 pvs~-------ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE-~ae~V~r~Sg~~~~~KEv-ellGCT~rGapivTlmASf 271 (382)
T COG1103 201 PVSG-------KEIGADFIVGSGHKSMAASAPIGVLAMSEE-WAEIVLRRSGRAFPKKEV-ELLGCTVRGAPIVTLMASF 271 (382)
T ss_pred cccc-------cccCCCEEEecCccchhccCCeeEEeehhH-HHHHHHhhccccccccee-eeecccccCchHHHHHhcC
Confidence 5532 234799999999999988888898887654 221111111111111110 1122444455666666666
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-CccEEEEEecCC------CCCCHHHHHHHHHhcCceeecc
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GVPLVAFSLKDN------KRHDEFEVAELLRRFGWIVPAY 405 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~------~~~~~~~l~~~L~~~Gi~v~~~ 405 (494)
-..-+ . -++...-.+.+++|.+.|++++|++.+...+ ...++-|..+.- ..-...-+.+.|.++||+ .
T Consensus 272 P~V~e-R-VkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~---G 346 (382)
T COG1103 272 PHVVE-R-VKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIH---G 346 (382)
T ss_pred HHHHH-H-HHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCcc---c
Confidence 43321 1 2344455678999999999999888776543 444555553211 011234577888888886 3
Q ss_pred ccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 406 TMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 406 ~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
..|+ -...+..|+- ..+.++++..+++++++++.
T Consensus 347 I~~G---~Tk~~K~svy-Gl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 347 IQPG---QTKYFKLSVY-GLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred cccC---ceeEEEEEee-cCCHHHHHHHHHHHHHHHHh
Confidence 3332 2345777764 56889999999999988775
No 246
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.82 E-value=2.2e-17 Score=167.70 Aligned_cols=349 Identities=14% Similarity=0.039 Sum_probs=209.5
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASFV----TTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++. -.+.+|.+.+++.+.++........ ........+++.+++++|.+. ..++++|++
T Consensus 29 dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~-------~~~~~SGs~ 99 (400)
T PTZ00125 29 EGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRA--FYNDVLGLAEKYITDLFGYDK-------VLPMNSGAE 99 (400)
T ss_pred CCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccccccc--ccCHHHHHHHHHHHhCCCCCE-------EEEeCCcHH
Confidence 455555444332 2235788988888887653221111 113355567777888887753 889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeE-EeCCCcchHHHHHHHHcCCeeEE---EeccCC---ccccCHHHHHHhhh-
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNI-VTGANVQVCWEKFARYFEVELKE---VKLSEG---YYVMDPVKAVEMVD- 200 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~v-i~~~~~h~s~~~~~~~~G~~v~~---v~~~~~---~~~~d~~~L~~~i~- 200 (494)
|+..++..++.....+ .|.+..+..| ......|.+....+...+..... .+..++ -...|+++|++.+.
T Consensus 100 A~e~al~~~~~~~~~~---~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 176 (400)
T PTZ00125 100 AGETALKFARKWGYEV---KGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD 176 (400)
T ss_pred HHHHHHHHHHHHHHhc---cCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC
Confidence 9999999886432111 1211122344 45666777665555544321110 000000 01248999999996
Q ss_pred hCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCc
Q 011057 201 ENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGH 276 (494)
Q Consensus 201 ~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~h 276 (494)
+++++|++..+.+++|.+.| +++|.++|++| |+++++|++|.++.. .......+......|.++++
T Consensus 177 ~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~------~~lli~Dev~~g~g~--~G~~~~~~~~~~~pd~~~~s-- 246 (400)
T PTZ00125 177 PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKY------NVLLIVDEIQTGLGR--TGKLLAHDHEGVKPDIVLLG-- 246 (400)
T ss_pred CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--cchhhHHHhcCCCCCEEEEc--
Confidence 56788888888889999987 99999999999 999999999975311 10001111111135777654
Q ss_pred ccCCcCC-ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHH
Q 011057 277 KYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLK 355 (494)
Q Consensus 277 K~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~ 355 (494)
|++.++. ++|+++++++ .. +.+.. . . ...++ ..+.....+..++++.+..+++ .++..++.++++
T Consensus 247 K~l~~g~~~ig~v~~~~~-~~-~~~~~--~-~----~~~t~--~~~~~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~ 312 (400)
T PTZ00125 247 KALSGGLYPISAVLANDD-VM-LVIKP--G-E----HGSTY--GGNPLACAVAVEALEVLKEEKL---AENAQRLGEVFR 312 (400)
T ss_pred ccccCCCcCcEEEEEcHH-HH-hhccC--C-C----CCCCC--CcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHH
Confidence 9887664 7898887653 22 11110 0 0 00111 1122334444555666544443 445556677777
Q ss_pred HHHhhC----CCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHH
Q 011057 356 EGLEKT----GRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAE 431 (494)
Q Consensus 356 ~~L~~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id 431 (494)
++|+++ +.+.... + ...++.+.+......+..++.++|.++|+.+.. .+..++|++.+..+++++++
T Consensus 313 ~~l~~l~~~~~~~~~~~-~-~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~-------~~~~~lRi~~~~~~~~~~i~ 383 (400)
T PTZ00125 313 DGLKELLKKSPWVKEIR-G-KGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKP-------THDNIIRFAPPLVITKEQLD 383 (400)
T ss_pred HHHHHHHhcCCCeEEEe-c-ccEEEEEEEccCcchHHHHHHHHHHHCCeEEee-------cCCCEEEEECCccCCHHHHH
Confidence 777664 2111122 2 345666666432234567899999999988632 13457999988888999999
Q ss_pred HHHHHHHHHHHHHhc
Q 011057 432 RLVLDITKVLHELDS 446 (494)
Q Consensus 432 ~~i~~l~~~~~~l~~ 446 (494)
++++.|+++++++..
T Consensus 384 ~~l~~l~~~l~~~~~ 398 (400)
T PTZ00125 384 QALEIIKKVLKSFDS 398 (400)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999998887754
No 247
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=1.8e-17 Score=167.82 Aligned_cols=300 Identities=17% Similarity=0.066 Sum_probs=193.5
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH----HHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK----FARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~----~~~~~ 174 (494)
++++.++++.|.+. ++++++|+.|+..++.++... +++|+++...|..... .+...
T Consensus 73 ~Le~~lA~l~g~~~-------av~~sSG~aAi~~al~all~~-------------Gd~Vv~~~~~y~~t~~~~~~~l~~~ 132 (436)
T PRK07812 73 VVEQRIAALEGGVA-------ALLLASGQAAETFAILNLAGA-------------GDHIVSSPRLYGGTYNLFHYTLPKL 132 (436)
T ss_pred HHHHHHHHHhCCCe-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEeCCcchHHHHHHHHHhhcC
Confidence 45556999999875 788999999998887766321 2578888877765443 34446
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++ +. .|+++++++++++|++|++.+++||+|.+.|+++|+++||++ |++++||++++.+..
T Consensus 133 Gi~v~~vd-d~----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~------gi~liVD~t~a~~~~-- 199 (436)
T PRK07812 133 GIEVSFVE-DP----DDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEA------GVPLIVDNTIATPYL-- 199 (436)
T ss_pred eEEEEEEC-CC----CCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 77777774 22 389999999999999999999999999999999999999999 999999999986432
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc-eEEEEEeCCCC-cccc-----cccccCCCCC---C--CCCc-------c
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG-IGWVIWRNKED-LPEE-----LIFHINYLGA---D--QPTF-------T 315 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~G~~~~~~~~~-~~~~-----~~~~~~y~~~---~--~~~~-------~ 315 (494)
..+ . ..++|+++.++|||++++.+ +|.+++..... .... ....+.|... . ...+ .
T Consensus 200 ~~p-l-----~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (436)
T PRK07812 200 IRP-L-----EHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQL 273 (436)
T ss_pred CCc-h-----hcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHH
Confidence 111 1 13799999999999976533 56666643321 0000 0001111110 0 0000 0
Q ss_pred --cccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC----------------CCccEE
Q 011057 316 --LNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD----------------EGVPLV 376 (494)
Q Consensus 316 --~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~----------------~~~~~v 376 (494)
..|.. .. +.-+.+...|...+..++++..+++..+.+.|++.|.++ +..|. ...+++
T Consensus 274 ~~~~G~~--l~--p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~ 349 (436)
T PRK07812 274 LRDLGSA--IS--PFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVL 349 (436)
T ss_pred HHhcCCC--CC--HHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEE
Confidence 00100 11 122334445667788899999999999999999999875 43331 024589
Q ss_pred EEEecCCCCCCHHHHHHHHHhcCceee-----c-cccCCC--------------CCCceEEEEEeccCCChHHHHHHHHH
Q 011057 377 AFSLKDNKRHDEFEVAELLRRFGWIVP-----A-YTMPAD--------------AQHITVLRVVIREDFSRTLAERLVLD 436 (494)
Q Consensus 377 ~f~~~~~~~~~~~~l~~~L~~~Gi~v~-----~-~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~~ 436 (494)
+|.+.+. ......+.+.|.--....+ + ...|.. .-....+|+|++- |+.+.++++
T Consensus 350 sf~l~~~-~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl----Ed~~dli~d 424 (436)
T PRK07812 350 SFELAGG-VEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI----EGIDDILAD 424 (436)
T ss_pred EEEecCC-HHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHH
Confidence 9998542 1124455555542111110 0 011110 0113579999985 788999999
Q ss_pred HHHHHHHHhc
Q 011057 437 ITKVLHELDS 446 (494)
Q Consensus 437 l~~~~~~l~~ 446 (494)
|+++++.+++
T Consensus 425 l~~Al~~~~~ 434 (436)
T PRK07812 425 LEAGFAAAKA 434 (436)
T ss_pred HHHHHHhhhc
Confidence 9999987765
No 248
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=2.6e-18 Score=171.04 Aligned_cols=291 Identities=14% Similarity=0.082 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH----H
Q 011057 95 ELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK----F 170 (494)
Q Consensus 95 ~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~----~ 170 (494)
...+.+++.++.+-|.+. .+++++|++|+..++.++.+. +++||++.+.|..+.. .
T Consensus 64 Pt~~~Le~~la~le~~~~-------~v~~sSG~aAi~~~l~all~~-------------GD~Vlv~~~~Y~~~~~l~~~~ 123 (395)
T PRK05967 64 PTTDALCKAIDALEGSAG-------TILVPSGLAAVTVPFLGFLSP-------------GDHALIVDSVYYPTRHFCDTM 123 (395)
T ss_pred hHHHHHHHHHHHHhCCCC-------EEEECcHHHHHHHHHHHhcCC-------------CCEEEEccCCcHHHHHHHHHH
Confidence 334445666888877653 677888999999888776331 3689999999987664 4
Q ss_pred HHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccc
Q 011057 171 ARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGF 250 (494)
Q Consensus 171 ~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~ 250 (494)
++..|++++.++.+ +.+.++++++++|++|++.+|+||++.+.|+++|+++||++ |++++||++++.+
T Consensus 124 l~~~Gi~v~~vd~~------~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~------g~~vvVD~t~a~p 191 (395)
T PRK05967 124 LKRLGVEVEYYDPE------IGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRH------GAIVMMDNTWATP 191 (395)
T ss_pred HHhcCeEEEEeCCC------CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHh------CCEEEEECCccCc
Confidence 57789998888532 34789999999999999999999999999999999999999 9999999999864
Q ss_pred cccccCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHH
Q 011057 251 IAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQ 328 (494)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~ 328 (494)
. ...... .++|++..+..|++.+..+ .|++ +.++... ..+....... |.. .....+
T Consensus 192 ~---~~~pl~-----~GaDivv~S~tKy~~Gh~d~~~G~v-~~~~~~~-~~l~~~~~~~----------G~~--~~p~da 249 (395)
T PRK05967 192 L---YFRPLD-----FGVDISIHAATKYPSGHSDILLGTV-SANEKCW-PQLLEAHGTL----------GLC--AGPDDT 249 (395)
T ss_pred e---ecChhH-----cCCCEEEEecccccCCCCCeeEEEE-EcCHHHH-HHHHHHHHHc----------CCC--CCHHHH
Confidence 3 222112 3899999999999765443 3544 3333211 1111000001 111 122223
Q ss_pred HHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCC---CCCCHH
Q 011057 329 YYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDN---KRHDEF 389 (494)
Q Consensus 329 ~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~---~~~~~~ 389 (494)
| +...|.+.+..++++..+++..+.+.|++.|.++ +..|. ...++++|.+++. ......
T Consensus 250 ~--l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~ 327 (395)
T PRK05967 250 Y--QILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAH 327 (395)
T ss_pred H--HHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHH
Confidence 3 3344556678889999999999999999998774 44442 0246899999632 111133
Q ss_pred HHHHHHHhcCceee-----c----cccCC-----CCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 390 EVAELLRRFGWIVP-----A----YTMPA-----DAQHITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 390 ~l~~~L~~~Gi~v~-----~----~~~~~-----~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
++.++|.--.+.++ + ...+. .......+|+|++- |+.+.++++|+++++.+.
T Consensus 328 ~f~~~l~l~~~~~slG~~~sLi~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~dLi~Dl~~Al~~~~ 393 (395)
T PRK05967 328 AFLDALEIFGLGYSWGGYESLALHVKLGDRTVAKAPYAGPVIRLQIGL----EDVPDLKADLERGFAAAS 393 (395)
T ss_pred HHHHhCCcceEccCCCCcceeeeeCCCChhHhhhccCCCCeEEEEecc----CCHHHHHHHHHHHHHhhh
Confidence 45554432111100 0 00000 00112579999985 778889999999988654
No 249
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.82 E-value=1.8e-17 Score=170.02 Aligned_cols=360 Identities=14% Similarity=0.050 Sum_probs=202.4
Q ss_pred cccccccCCChH-HHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHH-HHHhCCCCCCCCCcceeeecChhHHHHHHHHH
Q 011057 59 NLASFVTTWMEP-ECDKLMMAAINKNYVDMDEYPVTTELQNRCVNII-ARLFNAPLEDSETAVGVGTVGSSEAIMLAGLA 136 (494)
Q Consensus 59 ~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~l-a~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a 136 (494)
+++.+.+...+| .+.++...... .+|...++..++.+++.+++ .+..+......+...+++|+|+++|+.+++.+
T Consensus 104 ~l~~g~p~~~~~~~v~e~~~~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~a 180 (527)
T PRK09275 104 SYVRDQLGFDADEFVYELVDGIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDS 180 (527)
T ss_pred hhcCCCCCCCCCHHHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHH
Confidence 444444444444 46665544432 24666678888888877744 44333221110112589999999999988776
Q ss_pred HHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEec--c-CCccccCHHHHHHhhhhCCeEEEEeeCCC
Q 011057 137 FKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKL--S-EGYYVMDPVKAVEMVDENTICVAAILGST 213 (494)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~--~-~~~~~~d~~~L~~~i~~~t~~vv~~~~~~ 213 (494)
+.... .-..+++|+++.+.+..+...+++.|.+++.+++ + +++|.+|+++|++++++++++|++++|+|
T Consensus 181 L~~~~--------ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~N 252 (527)
T PRK09275 181 LKENG--------LLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSN 252 (527)
T ss_pred Hhhhh--------cCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcC
Confidence 42110 0011368999999999999998888766555544 3 33588999999999999999999999999
Q ss_pred CcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccC-CcCCceEEEE
Q 011057 214 LNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG-LVYAGIGWVI 289 (494)
Q Consensus 214 ~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l-~~p~g~G~~~ 289 (494)
|||.+.+ +++|+++|+++.. ++++++|++|+.+...+. +.. .. ...--++..++.|.+ ++++++|+++
T Consensus 253 PTG~v~s~e~l~~I~~ia~~~~~----~l~II~DEvY~~f~~~~~-s~~--~~-~~~~~I~v~SfSK~f~mtG~RlG~i~ 324 (527)
T PRK09275 253 PPSVAMSDESLEKIADIVNEKRP----DLMIITDDVYGTFVDDFR-SLF--AV-LPYNTILVYSFSKYFGATGWRLGVIA 324 (527)
T ss_pred CcCCCCCHHHHHHHHHHHHhcCC----CcEEEECCCChhhccccc-CHH--Hh-CCCCEEEEeehhhhccCcHhHHhhhh
Confidence 9999966 6778888854311 899999999987642111 100 00 111223444566765 7889999998
Q ss_pred EeCCCCcccc---cc------cccCCCC--CCC-------------C---CcccccCcchHHHH-HHHHHHHHh--cHhH
Q 011057 290 WRNKEDLPEE---LI------FHINYLG--ADQ-------------P---TFTLNFSKGSSQVI-AQYYQLIRL--GFEG 339 (494)
Q Consensus 290 ~~~~~~~~~~---~~------~~~~y~~--~~~-------------~---~~~~~~s~~~~~~~-a~~~al~~l--~~~g 339 (494)
..++..+... ++ ....|-. ... . .....+...+.... ++.+...++ ....
T Consensus 325 ~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~ 404 (527)
T PRK09275 325 LHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAY 404 (527)
T ss_pred cCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHH
Confidence 7654211110 00 0000000 000 0 00011212112222 221222223 2344
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEE-EecCC--------------CCCCHHHHHHHHHhc-Cceee
Q 011057 340 YRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAF-SLKDN--------------KRHDEFEVAELLRRF-GWIVP 403 (494)
Q Consensus 340 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f-~~~~~--------------~~~~~~~l~~~L~~~-Gi~v~ 403 (494)
.++..+.+.++++.+.+.| + +.+...++...+++| .+... +..+..+++.+|.++ |+.+.
T Consensus 405 ~~~~~~~~~~Rr~~l~~~L---g-~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~ 480 (527)
T PRK09275 405 KKAMKDIIRRRYKALYEGL---G-LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLL 480 (527)
T ss_pred HHHHHHHHHHHHHHHHHHc---C-CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEe
Confidence 5566777777778888877 2 332211123444443 33210 013567888887755 67653
Q ss_pred ccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 404 AYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 404 ~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
...... .+...+|+|+.. .+.+++....+.|++++++.
T Consensus 481 PG~~Fg--~~~~~vRis~a~-~~~~~~~~~~~rl~~~l~~y 518 (527)
T PRK09275 481 PGGGFG--GPEWSVRVSLAN-LNEEDYAKIGKAIRKLLDEY 518 (527)
T ss_pred CchhhC--CCCCeEEEEEec-CCHHHHHHHHHHHHHHHHHH
Confidence 222211 124579999863 34556665555555555544
No 250
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.82 E-value=2.3e-18 Score=171.76 Aligned_cols=281 Identities=16% Similarity=0.048 Sum_probs=183.4
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHH
Q 011057 91 PVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKF 170 (494)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~ 170 (494)
|...++| +.++++. .+ ..+++++|++|+..++.+... .+++|+++.+.|+.+...
T Consensus 51 p~~~~Le----~~lA~l~-~~-------~~v~~~sG~~Ai~~~l~all~-------------~Gd~Vl~~~~~y~~~~~~ 105 (366)
T PRK07582 51 PTWRALE----AALGELE-GA-------EALVFPSGMAAITAVLRALLR-------------PGDTVVVPADGYYQVRAL 105 (366)
T ss_pred ccHHHHH----HHHHHHc-CC-------CEEEECCHHHHHHHHHHHhcC-------------CCCEEEEeCCCcHhHHHH
Confidence 3455555 4588877 22 267788888898877766522 126899988888766554
Q ss_pred H----HHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecc
Q 011057 171 A----RYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAA 246 (494)
Q Consensus 171 ~----~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (494)
+ ...|++++.++.+++ + + .+.+++++|++.+++||+|.+.|+++|+++|+++ |++++||++
T Consensus 106 ~~~~l~~~G~~v~~v~~~~~-~----~----~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~------g~~lvVD~t 170 (366)
T PRK07582 106 AREYLAPLGVTVREAPTAGM-A----E----AALAGADLVLAETPSNPGLDVCDLAALAAAAHAA------GALLVVDNT 170 (366)
T ss_pred HHHHHhcCeEEEEEECCCCh-H----H----HhccCceEEEEECCCCCCCCccCHHHHHHHHHHc------CCEEEEECC
Confidence 3 446889998886542 1 1 2335789999999999999999999999999999 999999999
Q ss_pred cccccccccCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHH
Q 011057 247 SGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQ 324 (494)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~ 324 (494)
|+... ... ..+ .++|+++.+++||+.++.| .|+++.+++... ..+.....+.+. . ..
T Consensus 171 ~~~~~---~~~--p~~---~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~-~~l~~~~~~~g~---------~---~~ 229 (366)
T PRK07582 171 TATPL---GQR--PLE---LGADLVVASDTKALTGHSDLLLGYVAGRDPELM-AAVERWRLLAGA---------I---PG 229 (366)
T ss_pred CCCcc---ccC--chh---cCCcEEEecccccccCCCCeeEEEEEcCcHHHH-HHHHHHHHHhCC---------C---CC
Confidence 86421 111 112 2689999999999988777 477776544322 211111111111 1 11
Q ss_pred HHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEee-cC----C-----------CccEEEEEecCCCCCCH
Q 011057 325 VIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVS-KD----E-----------GVPLVAFSLKDNKRHDE 388 (494)
Q Consensus 325 ~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~----~-----------~~~~v~f~~~~~~~~~~ 388 (494)
....|.+++.+ ..+..++++..+++..+.+.|++.+.++.+. +. + ..++++|.++ +.
T Consensus 230 ~~~a~l~~r~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-----~~ 302 (366)
T PRK07582 230 PFEAWLAHRSL--GTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-----DA 302 (366)
T ss_pred HHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-----CH
Confidence 23344444443 3456778888999999999999999776433 21 1 3569999984 24
Q ss_pred HHHHHHHHhcCceeeccccCC---------CC---CCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 389 FEVAELLRRFGWIVPAYTMPA---------DA---QHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 389 ~~l~~~L~~~Gi~v~~~~~~~---------~~---~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
.++.+.|...+++..+..... .. .....+|+|++. |+.+.++++|+++++.
T Consensus 303 ~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGl----E~~~dli~dl~~al~~ 365 (366)
T PRK07582 303 AAAERFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGI----EDTDDLVADLERALDA 365 (366)
T ss_pred HHHHHHHHhCCcceecccCCCccchhhhHHHcCCCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 566666766666543111100 00 113579999986 5566677888887764
No 251
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=1.6e-17 Score=167.13 Aligned_cols=308 Identities=18% Similarity=0.140 Sum_probs=197.4
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH
Q 011057 90 YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK 169 (494)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (494)
.|....+|+ .++++.|... ++.+++|+.|+.+++.++.. . +++||++...|.....
T Consensus 60 nPtv~~lE~----~la~leg~~~-------av~~~SG~aAi~~al~all~--------~-----GD~VI~~~~~Y~~T~~ 115 (432)
T PRK06702 60 NPTLAAFEQ----KLAELEGGVG-------AVATASGQAAIMLAVLNICS--------S-----GDHLLCSSTVYGGTFN 115 (432)
T ss_pred CcHHHHHHH----HHHHHhCCCc-------EEEECCHHHHHHHHHHHhcC--------C-----CCEEEECCCchHHHHH
Confidence 355555554 4999999864 78899999999988887632 1 2689999998875555
Q ss_pred H----HHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 011057 170 F----ARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDA 245 (494)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (494)
. +...|++++.++ ..+|+++++++|+++|++|++.++.||++.+.|+++|+++|+++ |+++++|+
T Consensus 116 ~~~~~l~~~Gi~v~~vd-----~~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~------gi~livD~ 184 (432)
T PRK06702 116 LFGVSLRKLGIDVTFFN-----PNLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKEL------EVPFIVDN 184 (432)
T ss_pred HHHHHHHHCCCEEEEEC-----CCCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHc------CCEEEEEC
Confidence 4 677899988885 35789999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCcccccccCCCceEEEEcCcccCCcCCce-EEEEEeCCC--Ccc----cccccccCC-----CCCCC-C
Q 011057 246 ASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGI-GWVIWRNKE--DLP----EELIFHINY-----LGADQ-P 312 (494)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~-G~~~~~~~~--~~~----~~~~~~~~y-----~~~~~-~ 312 (494)
+++. |+....+. .++|++..|..||+.+..++ |.+++.... +.. ........+ ..... .
T Consensus 185 T~~t---P~~~~pl~-----~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~ 256 (432)
T PRK06702 185 TLAT---PYLCQAFE-----HGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAA 256 (432)
T ss_pred CCCc---hhhCChhh-----cCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchh
Confidence 9874 33322222 37999999999999876554 333432211 000 000000000 00000 0
Q ss_pred C-----c--ccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC--------------
Q 011057 313 T-----F--TLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-------------- 371 (494)
Q Consensus 313 ~-----~--~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-------------- 371 (494)
. . .........+....|..++ |-+.+..++++..+++..+.+.|++.|.++.+..|.
T Consensus 257 ~~~~~~~~~~~~~~g~~~sp~~a~l~~r--gL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~ 334 (432)
T PRK06702 257 AYIVKARVQLLRDYGNCMSPFNAYISNI--GLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYL 334 (432)
T ss_pred hHHHHHHHHHHHHccCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhC
Confidence 0 0 0000000122233443333 445577889999999999999999999776333220
Q ss_pred ---CccEEEEEecCCCCCCHHHHHHHHHhcCceee-----c-cccCCCC------------C--CceEEEEEeccCCChH
Q 011057 372 ---GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVP-----A-YTMPADA------------Q--HITVLRVVIREDFSRT 428 (494)
Q Consensus 372 ---~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~-----~-~~~~~~~------------~--~~~~lRvs~~~~~t~~ 428 (494)
..++++|.+++. ......+.+.|.=-.+.++ + ...|... . ..+.+|+|++- |
T Consensus 335 ~~g~gg~~sf~l~~~-~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl----E 409 (432)
T PRK06702 335 KKGASGVLTFGIKGG-LEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI----E 409 (432)
T ss_pred cCCCceEEEEEecCC-HHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc----C
Confidence 236899998631 1123345554432111110 0 0011100 1 13589999985 7
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 011057 429 LAERLVLDITKVLHELDSL 447 (494)
Q Consensus 429 ~id~~i~~l~~~~~~l~~~ 447 (494)
+.|.+++||+++++-=+++
T Consensus 410 d~eDLi~Dl~~Al~~~~~~ 428 (432)
T PRK06702 410 DVSDIIADLEAALVGGKQH 428 (432)
T ss_pred CHHHHHHHHHHHHhcCccc
Confidence 8888999999988765544
No 252
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.82 E-value=7.9e-18 Score=166.20 Aligned_cols=271 Identities=16% Similarity=0.070 Sum_probs=177.4
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCee
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVEL 178 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (494)
.+++.+++.+|.+. +++|+|+++++.+.+.+ . .+++|+++.+++..+...++..|+++
T Consensus 53 ~Lr~~ia~~~~~~~-------I~it~Gs~~al~~~~~~--~-------------~gd~v~v~~P~y~~~~~~~~~~g~~~ 110 (330)
T PRK05664 53 GLEAAARAYYGAPQ-------LLPVAGSQAAIQALPRL--R-------------APGRVGVLSPCYAEHAHAWRRAGHQV 110 (330)
T ss_pred HHHHHHHHHhCCCC-------EEECcCHHHHHHHHHHc--c-------------CCCEEEEcCCChHHHHHHHHHcCCeE
Confidence 46677999888753 89999999998866431 1 12689999999999999999999999
Q ss_pred EEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHH---HHHHHHHHhhcccCCCceEEEeccccccccccc
Q 011057 179 KEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVK---LLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL 255 (494)
Q Consensus 179 ~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~---~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (494)
+.++++ +++++++ +++++++++|+||||.+.+.+ +|+++|+++ ++++++|++|..+. +.
T Consensus 111 ~~v~~~---------~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~------~~~iI~DE~y~~~~-~~- 172 (330)
T PRK05664 111 RELDEA---------EVEAALD-SLDVLVVVNPNNPTGRRFDPARLLAWHARLAAR------GGWLVVDEAFMDNT-PQ- 172 (330)
T ss_pred EEechh---------hHhhhhc-CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhc------CCEEEEECCcccCC-Cc-
Confidence 988753 3444443 577889999999999997754 555566788 99999999997653 10
Q ss_pred CCcccccccCCCceEEEEcCcccC-CcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHH
Q 011057 256 YPELEWDFRLPLVKSINVSGHKYG-LVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIR 334 (494)
Q Consensus 256 ~~~~~~~~~~~~~D~~~~~~hK~l-~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~ 334 (494)
.+....+ ..+++ ++..++.|.+ +++.++||++... ..+ ..+..... .+. . +...+.++...
T Consensus 173 ~s~~~~~-~~~~v-i~~~SfSK~~gl~GlRiG~~v~~~-~l~-~~~~~~~~-------~~~--~-----~~~~~~~~~~~ 234 (330)
T PRK05664 173 HSLAACA-HRPGL-IVLRSFGKFFGLAGARLGFVLAEP-ALL-RALAELLG-------PWT--V-----SGPTRWLAQAA 234 (330)
T ss_pred ccccccc-cCCCE-EEEeeccccccCCCcceEEEEeCH-HHH-HHHHHhcC-------CCC--C-----CHHHHHHHHHH
Confidence 0101111 11223 4556777877 4889999998743 222 21111100 000 1 11223333333
Q ss_pred hcH-hHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCC
Q 011057 335 LGF-EGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQH 413 (494)
Q Consensus 335 l~~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~ 413 (494)
+.. ...++..+...++++++.+.|++.+ ++.. +....++.+.. + +..++.+.|.++|+.+..+. .
T Consensus 235 L~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~--~~~~~f~~~~~--~---~~~~~~~~l~~~gi~v~~f~------~ 300 (330)
T PRK05664 235 LADTPWQRRQRERLLAASQRLAALLRRHG-LTPA--GGCALFQWVRT--E---DAAALHEFLARRGILTRLFE------Q 300 (330)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHHCC-Cccc--CCcceEEEEec--C---CHHHHHHHHHHCCeEEEECC------C
Confidence 322 2235566777778899999999885 5421 11223444443 2 56789999999999986532 1
Q ss_pred ceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 414 ITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 414 ~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
..++|++++. +.+++++|++.|+++.++
T Consensus 301 ~~~iRis~~~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 301 PASLRFGLPA--DEADWARLDQALLAYRKE 328 (330)
T ss_pred CCeEEEECCC--CHHHHHHHHHHHHHHHhh
Confidence 2479999884 567788888888776554
No 253
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.82 E-value=9.6e-18 Score=166.00 Aligned_cols=275 Identities=13% Similarity=0.018 Sum_probs=185.1
Q ss_pred HHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCe
Q 011057 98 NRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVE 177 (494)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~ 177 (494)
.++++++++++|.+.. ..+++|+|+++++.+... +.. .+.|+++.+++..+..+++..|++
T Consensus 56 ~~L~~~ia~~~~~~~~----~~I~i~~Gs~e~i~~l~~-~~~--------------~g~v~v~~P~y~~y~~~~~~~g~~ 116 (339)
T PRK06959 56 DGLAACAARYYGAPDA----AHVLPVAGSQAAIRALPA-LLP--------------RGRVGIAPLAYSEYAPAFARHGHR 116 (339)
T ss_pred HHHHHHHHHHhCCCCc----ccEEECcCHHHHHHHHHH-hcC--------------CCeEEEcCCCcHHHHHHHHHCCCE
Confidence 4577889999999631 358999999999874432 211 124888999999999999999999
Q ss_pred eEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHH---HHhhcccCCCceEEEecccccccccc
Q 011057 178 LKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL---AEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 178 v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la---~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
++.++.++ +. +.+.++++++++|+||||.+.+.+++.+++ +++ +.++++|++|..+..
T Consensus 117 ~~~v~~~~-------~~----~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~------~~~vI~DEay~~~~~-- 177 (339)
T PRK06959 117 VVPLDEAA-------DT----LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAAR------GGTLIVDEAFADTLP-- 177 (339)
T ss_pred EEeecccc-------hh----ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEECCCccCCC--
Confidence 98887643 12 223456899999999999998877766654 566 899999999987642
Q ss_pred cCCcccccccCCCceEEEEcCcccC-CcCCceEEEEEeCCCCccccccc-ccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYG-LVYAGIGWVIWRNKEDLPEELIF-HINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l-~~p~g~G~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
. +........+++ ++..++.|.+ +++.++||++... ..+ +.+.. ...|. .+.+++.++.
T Consensus 178 ~-~s~~~~~~~~~v-i~l~SfSK~~gl~GlRiGy~v~~~-~li-~~l~~~~~~~~---------------vs~~~q~a~~ 238 (339)
T PRK06959 178 A-ASLAAHTDRPGL-VVLRSVGKFFGLAGVRAGFVLAAP-ALL-AALRDALGAWT---------------VSGPARHAVR 238 (339)
T ss_pred c-ccchhccCCCCE-EEEecChhhcCCcchheEEEecCH-HHH-HHHHHhcCCCC---------------CcHHHHHHHH
Confidence 1 111100112333 4556788876 4889999998643 222 22111 11110 1223455555
Q ss_pred HHhcHh-HHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCC
Q 011057 333 IRLGFE-GYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADA 411 (494)
Q Consensus 333 ~~l~~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~ 411 (494)
..+... ..++..+.+.+.++++.+.|++++ +++.. ...++.+.+. +..++.+.|.++||.++.+.
T Consensus 239 ~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~---~~~f~~~~~~-----~~~~l~~~l~~~GI~vr~~~----- 304 (339)
T PRK06959 239 AAFADAAWQAAMRERLAADGARLAALLRAHG-FAVHA---TPLFSWTDDP-----RAAALHAALARRGIWTRYFA----- 304 (339)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-CCccC---cceEEEEeCC-----CHHHHHHHHHhCCeEEEECC-----
Confidence 555433 345566777788899999999985 76542 2344444432 46789999999999986541
Q ss_pred CCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 412 QHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 412 ~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
...++|++++. +.+++++|+++|+++++.+..
T Consensus 305 -~~~~lRisi~~--~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 305 -PPPSVRFGLPA--DEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred -CCCeEEEECCC--CHHHHHHHHHHHHHHHHHHhh
Confidence 12379999842 668999999999999888765
No 254
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=2.5e-17 Score=167.25 Aligned_cols=293 Identities=14% Similarity=0.110 Sum_probs=189.7
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHH----HHHHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCW----EKFARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~----~~~~~~~ 174 (494)
.+++.++++.|.+. ++++++|+.|+.+++.++... +++|+++...|... ...+...
T Consensus 67 ~le~~lA~l~g~~~-------al~~~SG~~Ai~~al~all~p-------------Gd~VIv~~~~y~~t~~~~~~~~~~~ 126 (427)
T PRK05994 67 VLEERVAALEGGTA-------ALAVASGHAAQFLVFHTLLQP-------------GDEFIAARKLYGGSINQFGHAFKSF 126 (427)
T ss_pred HHHHHHHHHhCCCc-------EEEEcCHHHHHHHHHHHHhCC-------------CCEEEEecCcchhHHHHHHHHHHhc
Confidence 35556999999864 788999999999888776331 26899988888743 3446678
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++. .|+++++++++++|++|++.+++||+|.+.|+++|.++|+++ ++++++|++++.+..
T Consensus 127 G~~v~~vd~------~d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~------gi~livD~a~a~~~~-- 192 (427)
T PRK05994 127 GWQVRWADA------DDPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRA------GLPLIVDNTLASPYL-- 192 (427)
T ss_pred CcEEEEECC------CCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECCcccccc--
Confidence 998888864 378999999999999999999999999999999999999999 999999999986432
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc-eEEEEEeCCC-CcccccccccCCCCCCCCC-------------------
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG-IGWVIWRNKE-DLPEELIFHINYLGADQPT------------------- 313 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~G~~~~~~~~-~~~~~~~~~~~y~~~~~~~------------------- 313 (494)
.... ..++|+++.++|||++++.+ +|.+++.... .+... ....++......
T Consensus 193 -~~pl-----~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~--k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (427)
T PRK05994 193 -IRPI-----EHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKS--GKYPMLSEPRPEYHGLVLHETFGNFAFAIAA 264 (427)
T ss_pred -CCcc-----ccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccc--cccccccCCcchhhhhhHHHHhhhhhhHHHH
Confidence 1111 13799999999999987665 4656653221 10000 000001000000
Q ss_pred ----cccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------C-C
Q 011057 314 ----FTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------E-G 372 (494)
Q Consensus 314 ----~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~-~ 372 (494)
....|.. .+. .-+++..-+-..+..++++..+++.++.+.|++.|.++ +..|. . .
T Consensus 265 ~~~~~~~~G~~--~~~--~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~ 340 (427)
T PRK05994 265 RVLGLRDLGPA--ISP--FNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGA 340 (427)
T ss_pred HHHHHHhcCCC--CCH--HHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCc
Confidence 0000000 111 22333344556678899999999999999999999865 33331 0 2
Q ss_pred ccEEEEEecCCCCCCHHHHHHHHHhcCceee-----c-cccCCCC------------C--CceEEEEEeccCCChHHHHH
Q 011057 373 VPLVAFSLKDNKRHDEFEVAELLRRFGWIVP-----A-YTMPADA------------Q--HITVLRVVIREDFSRTLAER 432 (494)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~-----~-~~~~~~~------------~--~~~~lRvs~~~~~t~~~id~ 432 (494)
.++++|.+++. ......+.+.|.--.+.++ + ...|... . ....+|+|++- |+.+.
T Consensus 341 g~~~sf~l~~~-~~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----E~~~d 415 (427)
T PRK05994 341 GAVFTFGLKGG-YEAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGI----EDVDD 415 (427)
T ss_pred eEEEEEEecCC-HHHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEecc----CCHHH
Confidence 45889998631 1113344444432111100 0 1111110 1 13579999985 77888
Q ss_pred HHHHHHHHHH
Q 011057 433 LVLDITKVLH 442 (494)
Q Consensus 433 ~i~~l~~~~~ 442 (494)
+++||+++++
T Consensus 416 li~dl~~Al~ 425 (427)
T PRK05994 416 IIADLEQALA 425 (427)
T ss_pred HHHHHHHHHh
Confidence 8999999886
No 255
>PRK08354 putative aminotransferase; Provisional
Probab=99.81 E-value=3e-17 Score=160.77 Aligned_cols=285 Identities=19% Similarity=0.153 Sum_probs=175.2
Q ss_pred ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA 147 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~ 147 (494)
+++.+.+++.+++... . .+|... .+++++++++|.+ +++|+|+++++.+.+....
T Consensus 21 ~p~~~~~a~~~~~~~~-~---~yp~~~----~l~~~ia~~~~~~--------I~vt~G~~~al~~~~~~~~--------- 75 (311)
T PRK08354 21 PPEWLDEMFERAKEIS-G---RYTYYE----WLEEEFSKLFGEP--------IVITAGITEALYLIGILAL--------- 75 (311)
T ss_pred CCHHHHHHHHHHHHHh-h---cCCChH----HHHHHHHHHHCCC--------EEECCCHHHHHHHHHHhhC---------
Confidence 3467778887765432 1 234333 3567799988842 8899999999876654331
Q ss_pred cCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccC---HHHH
Q 011057 148 EGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFED---VKLL 224 (494)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~---l~~I 224 (494)
.+++|+++.++|+.+..+++..|++++.++ +|++.|++.+. +++++++++|+||||.+.+ +++|
T Consensus 76 -----~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~-------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l 142 (311)
T PRK08354 76 -----RDRKVIIPRHTYGEYERVARFFAARIIKGP-------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKELKPL 142 (311)
T ss_pred -----CCCeEEEeCCCcHHHHHHHHHcCCEEeecC-------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHHHHH
Confidence 126899999999999999999999986543 57888888876 4678999999999999966 5566
Q ss_pred HHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCC-cCCceEEEEEeCCCCcccccccc
Q 011057 225 NDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIFH 303 (494)
Q Consensus 225 ~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~G~~~~~~~~~~~~~~~~~ 303 (494)
.++|+++ ++|+++|++|+.+... .. . ...++ ..+..++.|.++ ++.++|+++. - .+.+...
T Consensus 143 ~~~a~~~------~~~li~De~y~~f~~~---~~-~--~~~~~-vi~~~S~SK~~~l~GlRiG~~v~-~----~~~l~~~ 204 (311)
T PRK08354 143 LDAVEDR------NALLILDEAFIDFVKK---PE-S--PEGEN-IIKLRTFTKSYGLPGIRVGYVKG-F----EEAFRSV 204 (311)
T ss_pred HHHhhhc------CcEEEEeCcchhcccc---cc-c--cCCCc-EEEEeccHhhcCCccceeeeeee-h----HHHHHHc
Confidence 7777888 9999999999876421 10 0 01122 344457778774 8889999886 1 1111111
Q ss_pred cCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCC
Q 011057 304 INYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDN 383 (494)
Q Consensus 304 ~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (494)
... .+- ....+ +++..+...+++.. .++.+++.+..+.+.+... .++ ..+++.+.+.
T Consensus 205 ~~~-----------~~~---~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~-~~~-~~~~~~~~~~-- 261 (311)
T PRK08354 205 RMP-----------WSI---GSTGY-AFLEFLIEDDFEHL----RKTMPLIWREKERFEKALY-VKS-DANFFIKDVG-- 261 (311)
T ss_pred CCC-----------ccC---CHHHH-HHHHHHHHhHHHHH----HHHHHHHHHHHHHHHHhcC-CCC-CCcEEEEECC--
Confidence 000 000 11111 11222212222211 1222222222222211111 122 4566665442
Q ss_pred CCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 384 KRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 384 ~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
+..++++.|.++|+.+....... ...++|++++ +.++.++|+++|+++
T Consensus 262 ---~~~~~~~~l~~~gv~v~~g~~f~---~~~~iRi~~~---~~~~~~~l~~al~~~ 309 (311)
T PRK08354 262 ---DAEKFVEFLKRNGILVRDCTSFG---LPGYIRFSVR---DREENEKLIRALREW 309 (311)
T ss_pred ---CHHHHHHHHHHCCeEEEecccCC---CCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 45789999999999986654332 1357999998 556778788877764
No 256
>PLN02368 alanine transaminase
Probab=99.81 E-value=5.1e-18 Score=171.03 Aligned_cols=273 Identities=11% Similarity=0.033 Sum_probs=180.9
Q ss_pred hHHHHHHHHHHhc-c-cCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 011057 69 EPECDKLMMAAIN-K-NYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 69 ~p~~~~~~~~~~~-~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
++.+.+++..... . ....|....+..++++.+.+++.+..|.+.+ ...+++|+|+++++.+++.++...
T Consensus 83 ~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~---~~~I~it~Ga~~al~~~~~~l~~~------ 153 (407)
T PLN02368 83 ADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSD---PELIFLTDGASKGVMQILNAVIRG------ 153 (407)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC---hhhEEEcccHHHHHHHHHHHHcCC------
Confidence 3445555543221 1 2334666667889999999999887786542 235999999999998888776310
Q ss_pred hcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhh------CCeEEEEeeCCCCccccc
Q 011057 147 AEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDE------NTICVAAILGSTLNGEFE 219 (494)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~------~t~~vv~~~~~~~tG~~~ 219 (494)
.+++|++++++|..+...++..|++++.+++++ +++.+|+++|++++++ +++++++++|+||||.+.
T Consensus 154 ------pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~ 227 (407)
T PLN02368 154 ------EKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCL 227 (407)
T ss_pred ------CCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccC
Confidence 126899999999999999999999999999874 3478999999999874 678899999999999995
Q ss_pred C---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc-c----ccc--CC-C-ceEEEEcCcccC--CcCCce
Q 011057 220 D---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE-W----DFR--LP-L-VKSINVSGHKYG--LVYAGI 285 (494)
Q Consensus 220 ~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~----~~~--~~-~-~D~~~~~~hK~l--~~p~g~ 285 (494)
+ +++|+++|+++ ++++++|++|+.+...-..+... . ++. .. . --++..++.|.+ ++++++
T Consensus 228 s~e~l~~l~~~a~~~------~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRi 301 (407)
T PLN02368 228 SEANLREILKFCYQE------RLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRG 301 (407)
T ss_pred CHHHHHHHHHHHHHc------CCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccce
Confidence 5 56778889999 99999999998764210000000 0 010 00 1 123344677864 589999
Q ss_pred EEEEE--eCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH------------hHHHHHHHHHHHHH
Q 011057 286 GWVIW--RNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF------------EGYRNVMENCHENA 351 (494)
Q Consensus 286 G~~~~--~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~------------~g~~~~~~~~~~~a 351 (494)
||+++ .++..+.. +..... . . . ..+.++++++..++.. +..+++.+.+.+++
T Consensus 302 Gy~i~~~~~~~li~~-~~~~~~-~-------~--~---~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr 367 (407)
T PLN02368 302 GYFEMTNIPPKTVEE-IYKVAS-I-------A--L---SPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRA 367 (407)
T ss_pred EEEEEeCCCHHHHHH-HHHHhc-c-------c--C---CCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 99986 23222211 111100 0 0 0 1223445555555531 11134567778889
Q ss_pred HHHHHHHhhCCCeEEeecCCCccEEEE
Q 011057 352 MVLKEGLEKTGRFNIVSKDEGVPLVAF 378 (494)
Q Consensus 352 ~~l~~~L~~~~~~~~~~~~~~~~~v~f 378 (494)
+++.+.|++++++.+..+ ..++++|
T Consensus 368 ~~~~~~L~~~~g~~~~~P--~Gafy~~ 392 (407)
T PLN02368 368 RMMTDGFNSCKNVVCNFT--EGAMYSF 392 (407)
T ss_pred HHHHHHHhCCCCeEeCCC--CeeeEec
Confidence 999999999987876544 4566665
No 257
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=2.4e-17 Score=167.01 Aligned_cols=299 Identities=18% Similarity=0.131 Sum_probs=187.5
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHH----Hc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFAR----YF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~----~~ 174 (494)
++++.||++.|.+. .+++++|++|+..++.++... +++|+++...|......+. ..
T Consensus 62 ~Le~~lA~l~g~~~-------~l~~ssG~~Ai~~al~al~~~-------------Gd~Vl~~~~~Y~~t~~~~~~~l~~~ 121 (425)
T PRK06084 62 VLEQRVAALEGGVG-------ALAVASGMAAITYAIQTIAEA-------------GDNIVSVAKLYGGTYNLLAHTLPRI 121 (425)
T ss_pred HHHHHHHHHhCCCc-------eeEehhHHHHHHHHHHHHhCC-------------CCEEEEeCCCcchHHHHHHHhcccc
Confidence 35556999999754 778899999999888776431 2578888777663333322 24
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|+++..++ ..|++++++++++++++|++.+++||+|.+.|+++|.++|+++ ++++++|++|+.+..
T Consensus 122 gi~v~~~d------~~d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~------~i~vVvD~a~a~~~~-- 187 (425)
T PRK06084 122 GIETRFAA------HDDIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRH------GVPLIVDNTVATPVL-- 187 (425)
T ss_pred eeEEEEEC------CCCHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 65655554 2489999999999999999999999999999999999999999 999999999986532
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCC-ccc---c---cc-cccCCCCCC-CCCcc---------
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKED-LPE---E---LI-FHINYLGAD-QPTFT--------- 315 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~-~~~---~---~~-~~~~y~~~~-~~~~~--------- 315 (494)
.... ..++|++..+++||+.++. .+|.+++.+... ... . +. ..+.|.+.. ...+.
T Consensus 188 -~~p~-----~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (425)
T PRK06084 188 -CRPF-----EHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCR 261 (425)
T ss_pred -CChh-----hcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHH
Confidence 1111 1279999999999997653 345555543211 000 0 00 011111100 00000
Q ss_pred ---cccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------C-CccE
Q 011057 316 ---LNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------E-GVPL 375 (494)
Q Consensus 316 ---~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~-~~~~ 375 (494)
..+........ -+++..-|...+..++++..+++..+.+.|+++|.++ +..|. . ..++
T Consensus 262 ~~~~~~~g~~l~~~--~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~ 339 (425)
T PRK06084 262 VVPLRNMGAALSPF--NAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASI 339 (425)
T ss_pred HHHHHhcCCCCCHH--HHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceE
Confidence 00000001112 2333344556678899999999999999999999865 43331 1 2458
Q ss_pred EEEEecCCCCCCHHHHHHHHHhcCceee-----c-cccCCC--------------CCCceEEEEEeccCCChHHHHHHHH
Q 011057 376 VAFSLKDNKRHDEFEVAELLRRFGWIVP-----A-YTMPAD--------------AQHITVLRVVIREDFSRTLAERLVL 435 (494)
Q Consensus 376 v~f~~~~~~~~~~~~l~~~L~~~Gi~v~-----~-~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~ 435 (494)
++|.+++. ......+.+.|.=-.+..+ + ...|.. .-....+|+|++- |+.+.+++
T Consensus 340 ~s~~~~~~-~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl----Ed~~dLi~ 414 (425)
T PRK06084 340 LSFGIKGG-QAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGI----EHIDDIIA 414 (425)
T ss_pred EEEEecCC-HHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHH
Confidence 99998642 1123455555542211110 0 011110 0113589999985 78999999
Q ss_pred HHHHHHHHH
Q 011057 436 DITKVLHEL 444 (494)
Q Consensus 436 ~l~~~~~~l 444 (494)
+|+++++..
T Consensus 415 dl~~Al~~~ 423 (425)
T PRK06084 415 DLAQALDAS 423 (425)
T ss_pred HHHHHHHhh
Confidence 999998754
No 258
>PRK08637 hypothetical protein; Provisional
Probab=99.81 E-value=8.6e-18 Score=169.81 Aligned_cols=329 Identities=13% Similarity=0.041 Sum_probs=195.4
Q ss_pred HHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhC-CCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcC
Q 011057 71 ECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFN-APLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEG 149 (494)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g 149 (494)
.+.+++.+........|....+...+++.+.+++.+..+ ..++ +...+++|+|+++++.+++.++...
T Consensus 24 ~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~--~~~~I~it~G~~~al~~~~~~l~~~--------- 92 (388)
T PRK08637 24 SLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGK--KMSLPIVTNALTHGLSLVADLFVDQ--------- 92 (388)
T ss_pred HHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCcccccc--ccceeeEccchHHHHHHHHHHhcCC---------
Confidence 344444332222345566667888888777776665432 2211 1124789999999998887776331
Q ss_pred CCCCCCeEEeCCCcchHHHHHH-HHcCCeeEEEeccCCccccCHHHHHHhhh----hCCeEEEEeeCCCCcccccC---H
Q 011057 150 KPFDKPNIVTGANVQVCWEKFA-RYFEVELKEVKLSEGYYVMDPVKAVEMVD----ENTICVAAILGSTLNGEFED---V 221 (494)
Q Consensus 150 ~~~~~~~vi~~~~~h~s~~~~~-~~~G~~v~~v~~~~~~~~~d~~~L~~~i~----~~t~~vv~~~~~~~tG~~~~---l 221 (494)
++.|+++.++|+.+...+ ...|++++.+|+..+++.+|+++++++++ +.+.++++++|+||||.+.+ +
T Consensus 93 ----gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~ 168 (388)
T PRK08637 93 ----GDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEA 168 (388)
T ss_pred ----CCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHH
Confidence 268999999999888864 46899999999842224689999999887 44556777889999999855 5
Q ss_pred HHHHHHHHH-----hhcccCCCceEEEecccccccccccCCcc-c--ccc-c-CCCceEEE-EcCcc-cCCcCCceEEEE
Q 011057 222 KLLNDLLAE-----KNKETGWDTPIHVDAASGGFIAPFLYPEL-E--WDF-R-LPLVKSIN-VSGHK-YGLVYAGIGWVI 289 (494)
Q Consensus 222 ~~I~~la~~-----~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~--~~~-~-~~~~D~~~-~~~hK-~l~~p~g~G~~~ 289 (494)
++|+++|++ + ++++++|++|..+.. ..... . ..+ . .+++.++. .++.| +++++.++||++
T Consensus 169 ~~l~~~~~~~~~~~~------~~~iI~De~Y~~l~~--~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~ 240 (388)
T PRK08637 169 TAIVEAIKELADAGT------KVVAVVDDAYFGLFY--EDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFIT 240 (388)
T ss_pred HHHHHHHHHHHhcCC------cEEEEecccchhccc--CCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEE
Confidence 667776665 6 999999999987632 11110 0 011 1 12333333 24455 788899999998
Q ss_pred EeC----CCCcccccccc-cCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHH----HHHHHHHHHHHHHHHhh
Q 011057 290 WRN----KEDLPEELIFH-INYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNV----MENCHENAMVLKEGLEK 360 (494)
Q Consensus 290 ~~~----~~~~~~~~~~~-~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~----~~~~~~~a~~l~~~L~~ 360 (494)
+.. +..+...+... ....... ....+.+++.++..++....+.+. .....+..+.+.+.|++
T Consensus 241 ~~~~~~~~~~l~~~~~~~~~~~~~~~---------~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~ 311 (388)
T PRK08637 241 FGTKAGSSQTVKEALEKKVKGLIRSN---------ISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYD 311 (388)
T ss_pred EccccCCcHHHHHHHHHHHHHHhhcc---------cCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 753 11111111100 0000000 001223345555555543333322 23344455566777766
Q ss_pred CC---CeEEeecCCCccEEE-EEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHH
Q 011057 361 TG---RFNIVSKDEGVPLVA-FSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVL 435 (494)
Q Consensus 361 ~~---~~~~~~~~~~~~~v~-f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~ 435 (494)
.+ ++.+..+ ..+++. ++++ +.+..+++++|. ++|+.+.. .+..++|++++. ...++++..++
T Consensus 312 ~~~~~~~~~~~~--~~g~~~~~~l~---~~~~~~l~~~l~~~~gv~~~~-------~~~~~iRi~~~~-~~~~~i~~~~~ 378 (388)
T PRK08637 312 GKYDDAWQAYPF--NSGYFMCLKLK---GVDAEELRVHLLEKYGIGTIA-------LNETDLRIAFSC-VEEEDIPELFD 378 (388)
T ss_pred hCCCCCcccccc--cceEEEEecCC---hHHHHHHHHHHhhhcceEEEe-------ccCCceEEEeec-CCHHHHHHHHH
Confidence 52 3555443 334444 4553 245678999885 67987642 124469999975 45677777776
Q ss_pred HHHHHHHHH
Q 011057 436 DITKVLHEL 444 (494)
Q Consensus 436 ~l~~~~~~l 444 (494)
.|.++++.+
T Consensus 379 ~l~~~~~~~ 387 (388)
T PRK08637 379 SIYKAIKDL 387 (388)
T ss_pred HHHHHHHhc
Confidence 666666543
No 259
>PRK05939 hypothetical protein; Provisional
Probab=99.81 E-value=2.8e-17 Score=165.22 Aligned_cols=301 Identities=17% Similarity=0.085 Sum_probs=190.5
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchH---
Q 011057 90 YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVC--- 166 (494)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s--- 166 (494)
.|....+|++ |+++.|.+. .+.+++|+.|+..++.++... +++|+++...|.+
T Consensus 46 ~p~~~~lE~~----la~leg~~~-------~v~~ssG~~Ai~~~l~all~~-------------Gd~Vv~~~~~y~~t~~ 101 (397)
T PRK05939 46 TPTTAALEAK----ITKMEGGVG-------TVCFATGMAAIAAVFLTLLRA-------------GDHLVSSQFLFGNTNS 101 (397)
T ss_pred CHHHHHHHHH----HHHHhCCCe-------EEEeCCHHHHHHHHHHHHcCC-------------CCEEEECCCccccHHH
Confidence 4555565555 999999864 677778899988777666321 2689988887653
Q ss_pred HHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecc
Q 011057 167 WEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAA 246 (494)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (494)
+...+...|++++.+++ .|+++++++++++|++|++.+++||+|.+.|+++|+++||++ |+++++|++
T Consensus 102 ~~~~l~~~G~~v~~v~~------~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~------gi~livD~t 169 (397)
T PRK05939 102 LFGTLRGLGVEVTMVDA------TDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRER------GLLYVVDNT 169 (397)
T ss_pred HHHHHHhcCCEEEEECC------CCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHc------CCEEEEECC
Confidence 33456778999988874 378999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCcccccccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCC-cccccccccCCCCCCCCCcc---c-----
Q 011057 247 SGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKED-LPEELIFHINYLGADQPTFT---L----- 316 (494)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~-~~~~~~~~~~y~~~~~~~~~---~----- 316 (494)
|+.+.. ..+ ...++|++..+++||++++. .+|++++.+... ..........|.......+. +
T Consensus 170 ~a~~~~--~~~------~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (397)
T PRK05939 170 MTSPWL--FRP------KDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGL 241 (397)
T ss_pred cccccc--cCc------cccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHH
Confidence 976421 111 11279999999999998743 346655533211 00000000000000000000 0
Q ss_pred ccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEe
Q 011057 317 NFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSL 380 (494)
Q Consensus 317 ~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~ 380 (494)
............| +..-|.+.+..++++..+++..+.+.|++.|.++ +..|. ...++++|.+
T Consensus 242 ~~~G~~~~p~~a~--l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~ 319 (397)
T PRK05939 242 RDMGATLSSEAAH--RIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFEL 319 (397)
T ss_pred HhcCCCCCHHHHH--HHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEe
Confidence 0000001112222 3334566778889999999999999999998764 44332 1356899998
Q ss_pred cCCCCCCHHHHHHHHHh--cCcee----eccccCCC------------CC--CceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 381 KDNKRHDEFEVAELLRR--FGWIV----PAYTMPAD------------AQ--HITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 381 ~~~~~~~~~~l~~~L~~--~Gi~v----~~~~~~~~------------~~--~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
++. .....+.+.|.= .+..+ +....|.. .. ....+|+|++. |+++.+++||+++
T Consensus 320 ~~~--~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGl----Ed~~dLi~dl~~A 393 (397)
T PRK05939 320 ADG--IDCFDFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGI----EDEADLIADFEQA 393 (397)
T ss_pred CCH--HHHHHHHHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHH
Confidence 642 134455555432 11110 00001100 00 13579999985 7888899999998
Q ss_pred HH
Q 011057 441 LH 442 (494)
Q Consensus 441 ~~ 442 (494)
++
T Consensus 394 l~ 395 (397)
T PRK05939 394 LD 395 (397)
T ss_pred Hh
Confidence 75
No 260
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.81 E-value=1e-17 Score=169.70 Aligned_cols=323 Identities=13% Similarity=0.056 Sum_probs=198.7
Q ss_pred HHHHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhc
Q 011057 70 PECDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAE 148 (494)
Q Consensus 70 p~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~ 148 (494)
+.+.+++.+++... ...|....|..++++.+.+|+.+..+...+. +...+++|+|+++|+.+++.+...-
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~-~~i~v~iT~Ga~~al~~~~~~l~~~-------- 117 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAA-GRVATVQTPGGTGALRVGADFLKRA-------- 117 (396)
T ss_pred HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCccccc-CeEEEEecCCccHHHHHHHHHHHHh--------
Confidence 56778877776542 2356667788899888888876543322111 1112489999999999887655210
Q ss_pred CCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEec-cCCccccCHHHHHHhhhh---CCeEEEEeeCCCCcccccC---H
Q 011057 149 GKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKL-SEGYYVMDPVKAVEMVDE---NTICVAAILGSTLNGEFED---V 221 (494)
Q Consensus 149 g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~~---~t~~vv~~~~~~~tG~~~~---l 221 (494)
..+++|+++++++..+..+++..|++++.+|+ +++++.+|++++++++.. ++.++++++++||||.+.+ +
T Consensus 118 ---~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~ 194 (396)
T PRK09257 118 ---FPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQW 194 (396)
T ss_pred ---CCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHH
Confidence 01268999999999999999999999999998 344478999999998763 3566777899999999954 6
Q ss_pred HHHHHHHHHhhcccCCCceEEEecccccccccccCCccc--ccc-c-CCCceEEEEcCcccCC-cCCceEEEEE--eCCC
Q 011057 222 KLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE--WDF-R-LPLVKSINVSGHKYGL-VYAGIGWVIW--RNKE 294 (494)
Q Consensus 222 ~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~-~~~~D~~~~~~hK~l~-~p~g~G~~~~--~~~~ 294 (494)
++|+++|+++ ++++++|++|..+.... ..... ..+ . .+. -++..++.|.++ ++.++||+++ .++.
T Consensus 195 ~~l~~~a~~~------~~~ii~De~Y~~l~~~~-~~~~~~~~~~~~~~~~-vi~i~SfSK~~~~~GlRiG~~~~~~~~~~ 266 (396)
T PRK09257 195 DELAELLKER------GLIPFLDIAYQGFGDGL-EEDAYGLRAFAAAGLE-LLVASSFSKNFGLYGERVGALSVVAEDAE 266 (396)
T ss_pred HHHHHHHHhC------CcEEEEeccccccccch-HHHHHHHHHHHhcCCc-EEEEEEcCCcCccccccceeEEEEeCCHH
Confidence 7788899999 99999999998753110 00000 011 1 122 355668889876 4889999975 2222
Q ss_pred CcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc--------HhHHHHHHHHHHHHHHHHHHHHhhCC---C
Q 011057 295 DLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--------FEGYRNVMENCHENAMVLKEGLEKTG---R 363 (494)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~--------~~g~~~~~~~~~~~a~~l~~~L~~~~---~ 363 (494)
.+.............. . .. .+.+.+.++...+. .+.+++..+++.++++.+.+.|++.+ +
T Consensus 267 ~~~~~~~~~~~~~~~~-----~-~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~ 337 (396)
T PRK09257 267 EADRVLSQLKATIRTN-----Y-SN---PPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRD 337 (396)
T ss_pred HHHHHHHHHHHHhhhh-----c-CC---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 1111100000000000 0 01 11222333333332 12344567777888889999998874 2
Q ss_pred eEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 364 FNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 364 ~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
+.+..+ ..+++.|.- ++...+.+.+.+.|+.+. | . .|++++. .+.++++..++.|+++
T Consensus 338 ~~~~~p--~gg~~~w~~-----l~~~~~~~l~~~~~V~~~----p---~----~ri~~~~-~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 338 FDFIAR--QRGMFSYSG-----LTPEQVDRLREEFGVYAV----G---S----GRINVAG-LNESNIDYVAEAIAAV 395 (396)
T ss_pred cccccc--cceEEEecC-----CCHHHHHHHHHcCCEEEc----C---C----CeEEEee-CCHHHHHHHHHHHHhh
Confidence 444333 345555431 233444455567788652 2 1 2899864 5677777777666654
No 261
>PLN02452 phosphoserine transaminase
Probab=99.81 E-value=2.4e-17 Score=163.01 Aligned_cols=305 Identities=13% Similarity=0.030 Sum_probs=205.6
Q ss_pred CChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeee-cChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcch--
Q 011057 89 EYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGT-VGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQV-- 165 (494)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t-~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~-- 165 (494)
.++.+.++.+++++.|.++++.|.+ ..+++. .|||.++..++..+..+ ++++++-....+
T Consensus 46 Rs~~f~~i~~~~~~~L~~l~~~p~~----y~v~~l~Gsgt~~~ea~~~nl~~~-------------~~~~l~~~~G~fg~ 108 (365)
T PLN02452 46 RGKEFLSIIQKAEADLRELLDIPDN----YEVLFLQGGASTQFAAIPLNLCKP-------------GDKADFVVTGSWSK 108 (365)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCCC----ceEEEEeCccHHHHHHHHHhcCCC-------------CCeEEEEECCHHHH
Confidence 4668889999999999999999642 345555 46777766665555221 133443334443
Q ss_pred HHHHHHHHcCCeeEEEeccCCc--cccCHHHHHHhhhhCCeEEEEeeCCCCccc-ccCHHHHHHHHHHhhcccCCCceEE
Q 011057 166 CWEKFARYFEVELKEVKLSEGY--YVMDPVKAVEMVDENTICVAAILGSTLNGE-FEDVKLLNDLLAEKNKETGWDTPIH 242 (494)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~--~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~-~~~l~~I~~la~~~~~~~~~~~~l~ 242 (494)
-+.+.|+.+|...+.....+.+ ...++++++ .+++...|.+++.+|.||. +.|++++. +++++
T Consensus 109 r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~hnETstGv~~~~~~~i~------------~~~lv 174 (365)
T PLN02452 109 KAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWE--LTPDAKFVHICANETIHGVEFKDYPDVG------------NVPLV 174 (365)
T ss_pred HHHHHHHHhCCCcEEEecCCCCCCCCCChHHcC--CCCCCcEEEECCCCCCCcEecCcccccC------------CCeEE
Confidence 4566777788754444222221 145666652 2456788999999999999 58877653 46899
Q ss_pred EecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCC--CCCcccccCc
Q 011057 243 VDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGAD--QPTFTLNFSK 320 (494)
Q Consensus 243 vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~--~~~~~~~~s~ 320 (494)
||++++.+..|+ ++...++|+ +++||++ +|+|+|+++++++... ......+.|+... .....+.+|+
T Consensus 175 VDa~Ss~g~~pi-------dv~~~~v~~--~saqK~l-GP~Gl~~v~vr~~~l~-~~~~~~~~~~~~~~~~~~~s~~~TP 243 (365)
T PLN02452 175 ADMSSNFLSKPV-------DVSKYGVIY--AGAQKNV-GPSGVTIVIIRKDLIG-NARPITPGMLDYKIHAENDSLYNTP 243 (365)
T ss_pred EECCccccCccc-------CHHHcCEEE--Eeccccc-CCCCeEEEEEcHHHHh-hcccCCCchhhHHHHHhcCCccCCh
Confidence 999998876544 333334555 5999988 5999999999875331 1111112222111 0111233688
Q ss_pred chHHHHHHHHHHHHhcHh-HHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC--CCccEEEEEecCCCCCCHHHHHHHHH
Q 011057 321 GSSQVIAQYYQLIRLGFE-GYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD--EGVPLVAFSLKDNKRHDEFEVAELLR 396 (494)
Q Consensus 321 ~~~~~~a~~~al~~l~~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~--~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (494)
+...+.++..+|+.+..+ |++.+.+++.++++++++.|++.++|- ...++ .+..+++|++.+. . ...+|.+.+.
T Consensus 244 ~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~-~-~~~~f~~~~~ 321 (365)
T PLN02452 244 PCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS-E-LEAEFVKEAA 321 (365)
T ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc-h-hHHHHHHHHH
Confidence 888899999999999876 899999999999999999999986662 11111 1445888998653 2 5678999999
Q ss_pred hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 397 RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 397 ~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
++|++...... ..+ -+|+++-+.++.++++.|++.+++.-+
T Consensus 322 ~~g~~~~~G~r---~~g--g~R~s~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 322 KAGMVQLKGHR---SVG--GMRASIYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred HCCCcccCCcc---ccC--ceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 99998522111 122 299999999999999988888877654
No 262
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=1.2e-17 Score=167.17 Aligned_cols=283 Identities=18% Similarity=0.119 Sum_probs=182.1
Q ss_pred HHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchH-HH---HHHHH
Q 011057 98 NRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVC-WE---KFARY 173 (494)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s-~~---~~~~~ 173 (494)
.++++.++++.|.+. .+++++|+.++..++ .+.. . +++|+++.+.|.. +. +.+..
T Consensus 53 ~~Le~~lA~l~g~~~-------~~~~~sG~aai~~~~-~~l~--------~-----Gd~Viv~~~~y~~~~~~~~~~~~~ 111 (377)
T PRK07671 53 AALEELIAVLEGGHA-------GFAFGSGMAAITAVM-MLFS--------S-----GDHVILTDDVYGGTYRVMTKVLNR 111 (377)
T ss_pred HHHHHHHHHHhCCCc-------eEEeCCHHHHHHHHH-HHhC--------C-----CCEEEECCCccchHHHHHHHHHhc
Confidence 345566999999864 566777777765443 2311 1 2689999988863 32 33455
Q ss_pred cCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccccccccc
Q 011057 174 FEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAP 253 (494)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (494)
.|++++.++. .|+++++++++++|++|++++|+||+|.+.|+++|.++|+++ ++++++|++|+.+..
T Consensus 112 ~G~~v~~v~~------~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~------g~~lvvD~a~~~~~~- 178 (377)
T PRK07671 112 FGIEHTFVDT------SNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEK------GLLTIVDNTFMTPYW- 178 (377)
T ss_pred CCeEEEEECC------CCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECCCCcccc-
Confidence 7888888763 478999999999999999999999999999999999999999 999999999976432
Q ss_pred ccCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 254 FLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 254 ~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
..+ .. .++|+++.+++||++++.+ .|+++++++... ..+.....+.+. . ......|..
T Consensus 179 -~~p---~~---~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~-~~~~~~~~~~g~---------~---~~~~~a~l~ 238 (377)
T PRK07671 179 -QSP---IS---LGADIVLHSATKYLGGHSDVVAGLVVVNSPELA-EDLHFVQNSTGG---------I---LGPQDSWLL 238 (377)
T ss_pred -CCh---hh---hCCeEEEecCcccccCCccceeEEEEeCcHHHH-HHHHHHHHhhcC---------C---CCHHHHHHH
Confidence 111 11 2689999999999987764 466666554322 211111111111 1 112233433
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC----------------CccEEEEEecCCCCCCHHHHHHHH
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE----------------GVPLVAFSLKDNKRHDEFEVAELL 395 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~~~~~~~~~l~~~L 395 (494)
++ +...+..++++..+++..+.+.|++.+++.-+..|. ..++++|.+ +. ......+.++|
T Consensus 239 ~~--~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~-~~-~~~~~~f~~~l 314 (377)
T PRK07671 239 LR--GLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV-GS-EETANKVLERL 314 (377)
T ss_pred Hc--CcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe-CC-HHHHHHHHHhC
Confidence 33 333455688888999999999999998765333221 245899988 31 11233444444
Q ss_pred Hh--cCceee---c-cccCCCC--------------CCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 396 RR--FGWIVP---A-YTMPADA--------------QHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 396 ~~--~Gi~v~---~-~~~~~~~--------------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
.= .+.... + ...|... -....+|+|++- |+.+.+++||+++++
T Consensus 315 ~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 377 (377)
T PRK07671 315 QYFTLAESLGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVGI----EDGEDLIEDLAQALA 377 (377)
T ss_pred CcceEccCCCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHhC
Confidence 31 111110 0 0111100 113579999985 778888999988763
No 263
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.80 E-value=1.3e-16 Score=161.34 Aligned_cols=340 Identities=14% Similarity=0.020 Sum_probs=197.8
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.+++....... ...+...++.++|+++.+.+ .+.+++||++
T Consensus 29 dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~-------~v~~~~sGse 99 (389)
T PRK01278 29 DGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNL--YRIPEQERLAERLVENSFAD-------KVFFTNSGAE 99 (389)
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccc--cCChHHHHHHHHHHhhCCCC-------EEEEcCCcHH
Confidence 45555544442 22345788999998888652221111 12233445667788877543 3899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCC-cchHHHHHHHHcCCeeEE--E-eccCCcc----ccCHHHHHHhhh
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGAN-VQVCWEKFARYFEVELKE--V-KLSEGYY----VMDPVKAVEMVD 200 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~~v~~--v-~~~~~~~----~~d~~~L~~~i~ 200 (494)
|+..++++++..... .|. ..+.+|++.+. .|.....+....|..... + +..++ + ..|+++++++++
T Consensus 100 A~~~al~~ar~~~~~----~G~-~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~l~ 173 (389)
T PRK01278 100 AVECAIKTARRYHYG----KGH-PERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPG-FDQVPFGDIEALKAAIT 173 (389)
T ss_pred HHHHHHHHHHHHHHh----cCC-CCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCC-ceEeCCCCHHHHHHhhC
Confidence 999999988654221 121 11246666554 554443333332322111 0 11111 1 268999999998
Q ss_pred hCCeEEEEeeCCCCcccc----cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccCCCceEEEEcC
Q 011057 201 ENTICVAAILGSTLNGEF----EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRLPLVKSINVSG 275 (494)
Q Consensus 201 ~~t~~vv~~~~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~ 275 (494)
+++++|++...++++|.. +.+++|.++|++| |+++++|++|.++.. ....... .+++ ..|.++ .
T Consensus 174 ~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~g~--~g~~~~~~~~~~-~pdi~t--~ 242 (389)
T PRK01278 174 PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDEN------GLLLIFDEVQCGMGR--TGKLFAHEWAGV-TPDIMA--V 242 (389)
T ss_pred CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CCcceeecccCC-CCCEEE--E
Confidence 888888888777777743 4799999999999 999999999986421 1111111 1122 246554 4
Q ss_pred cccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHH
Q 011057 276 HKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLK 355 (494)
Q Consensus 276 hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~ 355 (494)
.|.+.+++.+|+++.+++ .. +.+. ......+ ++.+.....+..++|+.+.+++ ..++..++.++++
T Consensus 243 sK~l~~G~~ig~~~~~~~-~~-~~~~-------~~~~~~t--~~~~~~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~ 308 (389)
T PRK01278 243 AKGIGGGFPLGACLATEE-AA-KGMT-------PGTHGST--YGGNPLAMAVGNAVLDVILAPG---FLDNVQRMGLYLK 308 (389)
T ss_pred ehhccCCcceEEEEEcHH-HH-hccC-------CCCCCCC--CCccHHHHHHHHHHHHHHhhhH---HHHHHHHHHHHHH
Confidence 588876677899887643 21 1111 1111111 1222333444555566554332 3455566666666
Q ss_pred HHHhhCCC-eE-Eeec-CCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHH
Q 011057 356 EGLEKTGR-FN-IVSK-DEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAER 432 (494)
Q Consensus 356 ~~L~~~~~-~~-~~~~-~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~ 432 (494)
++|+++.. .. ++.. .....++.+.+.. +..+++++|.++|+.+.. .+...+|++....++.++++.
T Consensus 309 ~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~----~~~~~~~~l~~~GV~~~p-------~~~~~lR~~p~~~~~~~~i~~ 377 (389)
T PRK01278 309 QKLEGLVDRFPDVIEEVRGKGLLLGLKCVV----PNRDLVQALRDEGLLTVG-------AGDNVVRLLPPLIITEEEIDE 377 (389)
T ss_pred HHHHHHHhhCCCceeeEecccEEEEEEEec----CHHHHHHHHHHCCeEEee-------cCCCEEEEeCCcccCHHHHHH
Confidence 66655311 11 2211 1123344555522 467899999999997532 124579999876788999999
Q ss_pred HHHHHHHHHHH
Q 011057 433 LVLDITKVLHE 443 (494)
Q Consensus 433 ~i~~l~~~~~~ 443 (494)
+++.|+++++.
T Consensus 378 ~l~~l~~~l~~ 388 (389)
T PRK01278 378 ALERLERAAES 388 (389)
T ss_pred HHHHHHHHHHh
Confidence 99888887754
No 264
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.80 E-value=1.1e-17 Score=167.39 Aligned_cols=284 Identities=18% Similarity=0.127 Sum_probs=184.1
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHH----HHHHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCW----EKFARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~----~~~~~~~ 174 (494)
.+++.++++.|.+. .+++++|+.|+.+++ .+.. .+++|+++++.|... ...+...
T Consensus 54 ~Le~~la~l~g~~~-------al~~~SG~~Al~~~l-~~l~-------------pGd~Vi~~~~~y~~t~~~~~~~~~~~ 112 (380)
T PRK06176 54 ALEELIADLEGGVK-------GFAFASGLAGIHAVF-SLFQ-------------SGDHVLLGDDVYGGTFRLFDKVLVKN 112 (380)
T ss_pred HHHHHHHHHhCCCC-------EEEECCHHHHHHHHH-HHcC-------------CCCEEEEcCCChhHHHHHHHHHHHhc
Confidence 35556999999864 677788888886444 3321 126899988877533 3455667
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++. .|+++++++++++|++|++.+|+||+|.+.|+++|+++|+++ ++++++|++|+.+..
T Consensus 113 gi~v~~vd~------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~------gi~vivD~t~a~~~~-- 178 (380)
T PRK06176 113 GLSCTIIDT------SDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDH------GLLTIVDNTFATPYY-- 178 (380)
T ss_pred CeEEEEcCC------CCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHc------CCEEEEECCcccccc--
Confidence 888887763 478999999999999999999999999999999999999999 999999999986432
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
..+ . ..++|+++++++||+.++.. .|+++.+++... ..+.....+.+. . ......|..+
T Consensus 179 ~~p-~-----~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~-~~~~~~~~~~G~---------~---~~~~~~~l~~ 239 (380)
T PRK06176 179 QNP-L-----LLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALA-QEIAFFQNAIGG---------V---LGPQDSWLLQ 239 (380)
T ss_pred CCc-c-----ccCCCEEEecCceeccCCccceeeEEEecHHHHH-HHHHHHHHHhcC---------C---CCHHHHHHHH
Confidence 111 1 13799999999999987764 455555443221 111111111110 0 0111223222
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC----------------CccEEEEEecCCCCCCHHHHHHHHH
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE----------------GVPLVAFSLKDNKRHDEFEVAELLR 396 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (494)
.|...+..++++..+++..+.+.|++.+.++-+..+. ..++++|.+++. ....++.+.|.
T Consensus 240 --~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~--~~~~~f~~~l~ 315 (380)
T PRK06176 240 --RGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKND--SEAVAFVESLK 315 (380)
T ss_pred --hccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCH--HHHHHHHHcCC
Confidence 3445567788888899999999999998765332221 245889998531 12344555443
Q ss_pred hcCceee-----c-cccCCC--------------CCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 397 RFGWIVP-----A-YTMPAD--------------AQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 397 ~~Gi~v~-----~-~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
--.+..+ + ...|.. .-....+|+|++- |+++.+++||+++++.+
T Consensus 316 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 316 LFILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGI----EHEQDLLEDLEQAFAKI 379 (380)
T ss_pred cceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHhhc
Confidence 2111100 0 011111 0114589999984 78899999999988753
No 265
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.80 E-value=5.5e-17 Score=164.65 Aligned_cols=339 Identities=14% Similarity=0.060 Sum_probs=205.2
Q ss_pred cCCCCCccccccc----CCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASFVT----TWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++++.++.. .+.+|.+.+++.+.++....... ........++.+.|++++|.+. ..++++|++
T Consensus 35 ~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~-------~~~~~SGs~ 105 (401)
T TIGR01885 35 EGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSR--AFYNDVFGEFAEYVTKLFGYDK-------VLPMNTGAE 105 (401)
T ss_pred CCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhcccccc--ccCCHHHHHHHHHHHhhcCCCE-------EEEeCccHH
Confidence 4555554444322 23478898888888765322111 1123445567777888888653 889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCc-chHHHHHHHHcCC------------eeEEEeccCCccccCHHHH
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANV-QVCWEKFARYFEV------------ELKEVKLSEGYYVMDPVKA 195 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~-h~s~~~~~~~~G~------------~v~~v~~~~~~~~~d~~~L 195 (494)
|+..++..++.....+ .|....+..|+..... |.+...++...|- ++..++ ..|+++|
T Consensus 106 A~e~ai~~a~~~~~~~---~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l 176 (401)
T TIGR01885 106 AVETAIKLARKWGYKV---KGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIP------YNNLEAL 176 (401)
T ss_pred HHHHHHHHHHHHhhhh---cCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeC------CCCHHHH
Confidence 9999999987643211 1111123466655554 6554444444331 122232 2378889
Q ss_pred HHhhhh---CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCc
Q 011057 196 VEMVDE---NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLV 268 (494)
Q Consensus 196 ~~~i~~---~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~ 268 (494)
++++++ +..+|++-...+++|.+.| +++|.++|++| ++++++|++|.++. ........+..-...
T Consensus 177 e~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~------~~lli~DEv~~g~g--~~G~~~~~~~~~~~~ 248 (401)
T TIGR01885 177 EEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKH------NVLLIADEIQTGLG--RTGKLLCVDHENVKP 248 (401)
T ss_pred HHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCC--ccchhhHHhhcCCCC
Confidence 888863 3456666666778899877 99999999999 99999999986531 111111111111246
Q ss_pred eEEEEcCcccCCcC-CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHH
Q 011057 269 KSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENC 347 (494)
Q Consensus 269 D~~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~ 347 (494)
|.++++ |.+.++ +.+|+++.+. +.. ..+.. .. ...++ +.++....+..++|+.+..+. ..++.
T Consensus 249 di~~~g--K~l~~g~~~ig~v~~~~-~i~-~~~~~--~~-----~~~t~--~~~p~~~~aa~a~L~~i~~~~---l~~~~ 312 (401)
T TIGR01885 249 DIVLLG--KALSGGVYPVSAVLADD-DVM-LTIKP--GE-----HGSTY--GGNPLACAVAVAALEVLEEEK---LAENA 312 (401)
T ss_pred CEEEee--ccccCCCCCcEEEEEcH-HHH-hhccC--CC-----CCCCC--CCCHHHHHHHHHHHHHHHhcc---HHHHH
Confidence 777654 876544 4577777643 222 11110 01 11122 222344555666777665443 44677
Q ss_pred HHHHHHHHHHHhhCCCeEEeec-CCCccEEEEEecCCC-CCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCC
Q 011057 348 HENAMVLKEGLEKTGRFNIVSK-DEGVPLVAFSLKDNK-RHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDF 425 (494)
Q Consensus 348 ~~~a~~l~~~L~~~~~~~~~~~-~~~~~~v~f~~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~ 425 (494)
.+++++|++.|++++ ..++.. .....++.+.+.... +.+..++++.|.++|+.+.. .+...+|++.+..+
T Consensus 313 ~~~~~~~~~~L~~l~-~~~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~-------~~~~~lRi~p~l~~ 384 (401)
T TIGR01885 313 EKLGEIFRDQLKKLP-KPIITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKP-------THGNIIRLAPPLVI 384 (401)
T ss_pred HHHHHHHHHHHHhcc-CCceeEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEe-------cCCCEEEEeCCccC
Confidence 778999999999885 333221 113456665554321 12467899999999998632 12457999998889
Q ss_pred ChHHHHHHHHHHHHHH
Q 011057 426 SRTLAERLVLDITKVL 441 (494)
Q Consensus 426 t~~~id~~i~~l~~~~ 441 (494)
+.++++++++.|++++
T Consensus 385 t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 385 TEEQLDEGLEIIKKVI 400 (401)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999998888765
No 266
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.80 E-value=9.4e-17 Score=162.97 Aligned_cols=339 Identities=17% Similarity=0.076 Sum_probs=202.0
Q ss_pred hcCCCCCccccccc----CCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASFVT----TWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++.+ .+.+|.+.+++.+.+......... ....++.++.++|+++.|.+. +++|+||+
T Consensus 36 ~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~~-------v~~~~gg~ 106 (396)
T PRK02627 36 DDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNL--YYIEPQEELAEKLVELSGMDK-------VFFCNSGA 106 (396)
T ss_pred CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccc--cCCHHHHHHHHHHHhhcCCCE-------EEECCCcH
Confidence 35666555554322 233588888888887653221111 235666778888999887743 89999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCC-CcchHHHHHHHHcCCeeEE---EeccCCcc----ccCHHHHHHhh
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGA-NVQVCWEKFARYFEVELKE---VKLSEGYY----VMDPVKAVEMV 199 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~-~~h~s~~~~~~~~G~~v~~---v~~~~~~~----~~d~~~L~~~i 199 (494)
+|+..++++++..... ....++.|++.. ..|.....+....+..... .++.++ + ..|++++++++
T Consensus 107 eA~~~al~~a~~~~~~------~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~i 179 (396)
T PRK02627 107 EANEAAIKLARKYGHK------KGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEG-FIYVPFNDIEALKAAI 179 (396)
T ss_pred HHHHHHHHHHHHHhcc------cCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCC-ceEeCCCCHHHHHHhc
Confidence 9999999988653210 001124565544 4554433333333322111 111111 1 23899999999
Q ss_pred hhCCeEEEEeeCCCCccc-c---cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccCCCceEEEEc
Q 011057 200 DENTICVAAILGSTLNGE-F---EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRLPLVKSINVS 274 (494)
Q Consensus 200 ~~~t~~vv~~~~~~~tG~-~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D~~~~~ 274 (494)
.+++++|++..+++++|. . +.+++|.++|+++ ++++++|++|+++.. ....... .++. ..|.++
T Consensus 180 ~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~------~~~lI~DE~~~g~g~--~g~~~~~~~~~~-~pdi~t-- 248 (396)
T PRK02627 180 TDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDEN------GILLILDEVQTGMGR--TGKLFAYQHYGI-EPDIMT-- 248 (396)
T ss_pred CCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhcCCCc--cCceeeehhcCC-CCCEEE--
Confidence 888888988888888884 3 3489999999999 999999999986421 1110111 1121 246555
Q ss_pred CcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHH
Q 011057 275 GHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVL 354 (494)
Q Consensus 275 ~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l 354 (494)
..|.+.++..+|+++.+++ .. +.+.. . ....+ ...+.....++.++++.+..+ +..++..++.+++
T Consensus 249 ~sK~~~~G~rig~~~~~~~-~~-~~~~~------~-~~~~t--~~~~~~~~~aa~~~l~~~~~~---~~~~~~~~~~~~~ 314 (396)
T PRK02627 249 LAKGLGGGVPIGAVLAKEK-VA-DVFTP------G-DHGST--FGGNPLACAAALAVIEIIEEE---GLLENAAEVGEYL 314 (396)
T ss_pred EcchhhCCcccEEEEEcHH-HH-hccCC------C-CCCCC--CCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHH
Confidence 4488777778899887543 22 11110 0 00011 112223334444455544333 3455666666666
Q ss_pred HHHHhhC----CCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHH
Q 011057 355 KEGLEKT----GRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLA 430 (494)
Q Consensus 355 ~~~L~~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~i 430 (494)
++.|.++ +.+..+ .+ ...++.+.+. .+..+++++|.++|+.+... +...+|++.+..++.+++
T Consensus 315 ~~~l~~~~~~~~~~~~~-~~-~g~~~~i~~~----~~~~~~~~~l~~~Gv~v~~~-------~~~~lRi~~~~~~~~~~i 381 (396)
T PRK02627 315 RAKLRELLEKYPGIKEV-RG-LGLMIGIELD----RPAAEIVKKALEKGLLINVT-------GDNVLRLLPPLIISKEEI 381 (396)
T ss_pred HHHHHHHHHhCCCeeee-cc-CcEEEEEEec----CcHHHHHHHHHHCCeEEeec-------CCCEEEEECCcccCHHHH
Confidence 6666554 212111 11 3456666662 25678999999999987431 235699998777899999
Q ss_pred HHHHHHHHHHHHHH
Q 011057 431 ERLVLDITKVLHEL 444 (494)
Q Consensus 431 d~~i~~l~~~~~~l 444 (494)
+++++.|+++++++
T Consensus 382 ~~~~~~l~~~l~~~ 395 (396)
T PRK02627 382 DEAVDRLEEVLKEL 395 (396)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999998887654
No 267
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=3.5e-17 Score=155.16 Aligned_cols=334 Identities=16% Similarity=0.128 Sum_probs=221.7
Q ss_pred hHHHHHHHHHHhcc-----cCC--CCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 011057 69 EPECDKLMMAAINK-----NYV--DMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKW 141 (494)
Q Consensus 69 ~p~~~~~~~~~~~~-----~~~--~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~ 141 (494)
++.+.+++-..+.+ .++ .|+......++|.-+.+...+|||.+. ..+-..+|++||+.+..++..+
T Consensus 39 S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~------anVQPhSGs~AN~av~~All~p- 111 (413)
T COG0112 39 SPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEY------ANVQPHSGSQANQAVYLALLQP- 111 (413)
T ss_pred CHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCc------cccCCCCchHHHHHHHHHHcCC-
Confidence 46666666554433 122 244455778899999999999999985 2455778999999888887542
Q ss_pred HHHHHhcCCCCCCCeEEeCCC---cchHHHHHHHHcCC--eeEEEeccCCccccCHHHHHHhhhh-CCeEEEEeeCCCCc
Q 011057 142 QNKRKAEGKPFDKPNIVTGAN---VQVCWEKFARYFEV--ELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAAILGSTLN 215 (494)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~~~~---~h~s~~~~~~~~G~--~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~~~~~~t 215 (494)
.+.|+--+. .|-+...-....|. ++...+++.+++.+|.|++++.+.+ +|++|++ |.+..
T Consensus 112 ------------GDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~--G~SaY 177 (413)
T COG0112 112 ------------GDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIA--GGSAY 177 (413)
T ss_pred ------------CCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEE--Ccccc
Confidence 246664333 34333222233343 4556677866789999999998776 5666543 43433
Q ss_pred ccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCC
Q 011057 216 GEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKED 295 (494)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~ 295 (494)
-..-|++++.++|++. |.+|.+|.||-.|.+ .....+. .++.+|+++.+.||++.+|.| |++++++.+.
T Consensus 178 ~r~id~~~~reIad~V------GA~L~~DmAHiaGLV--A~G~~p~--P~~~AdvVTtTTHKTlrGPrG-G~Il~~~eel 246 (413)
T COG0112 178 SRPIDFKRFREIADEV------GAYLMVDMAHVAGLI--AGGVHPN--PLPHADVVTTTTHKTLRGPRG-GIILTNDEEL 246 (413)
T ss_pred ccccCHHHHHHHHHHh------CceEEehHHHHHHHH--hcccCCC--CCCccceEeCCcccCCCCCCc-eEEEeccHHH
Confidence 4556899999999999 999999999965433 1121111 134699999999999988865 7777765322
Q ss_pred cccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccE
Q 011057 296 LPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPL 375 (494)
Q Consensus 296 ~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~ 375 (494)
. ..+ +...+.+. .+.+-...+++...+++...+.+++++.++..++++.|.+.|.+.| +++++......+
T Consensus 247 ~-kki--n~aVFPg~------qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G-~~vvsGgTdnHl 316 (413)
T COG0112 247 A-KKI--NSAVFPGL------QGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERG-FKVVSGGTDNHL 316 (413)
T ss_pred H-HHh--hhhcCCcc------CCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcC-CeEecCCccceE
Confidence 2 111 11111111 1222235566677777777778899999999999999999999987 999876545678
Q ss_pred EEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCC---CceEEEEEecc----CCChHHHHHHHHHHHHHHHHHh
Q 011057 376 VAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQ---HITVLRVVIRE----DFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 376 v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~---~~~~lRvs~~~----~~t~~~id~~i~~l~~~~~~l~ 445 (494)
+.+.+.+ .+++..+..+.|.+-||.+.--..|.+.. ....+|+.+-. .+.++|++...+-|.+++...+
T Consensus 317 ~lVDl~~-~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~ 392 (413)
T COG0112 317 VLVDLRS-KGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK 392 (413)
T ss_pred EEEEccc-CCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhccc
Confidence 8888763 46778889999999999986555554422 23458887543 3344566555555555555443
No 268
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.80 E-value=1.7e-16 Score=160.59 Aligned_cols=340 Identities=14% Similarity=0.031 Sum_probs=208.6
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++........ .......++.+.|+++++.+ ...++++|++
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~L~~~~~~~-------~~~f~~SGse 103 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNG--YTNEPVLRLAKKLVDATFAD-------KVFFCNSGAE 103 (397)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCc--cCCHHHHHHHHHHHhhCCCC-------EEEEeCCcHH
Confidence 45555554442 22345789999998888752211111 12333456777788887654 3899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeE-EeCCCcchHHHHHHHHcCCe------------eEEEeccCCccccCHHHH
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNI-VTGANVQVCWEKFARYFEVE------------LKEVKLSEGYYVMDPVKA 195 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~v-i~~~~~h~s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~L 195 (494)
|+..+++.++.....+ .+ ..+..| ......|.+...+....|.. +..++ ..|++++
T Consensus 104 A~e~Alk~ar~~~~~~---~~--~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l 172 (397)
T TIGR03246 104 ANEAALKLARRYALDK---HG--ADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAP------YNDLAAA 172 (397)
T ss_pred HHHHHHHHHHHHHHhc---CC--CCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeC------CCCHHHH
Confidence 9999999987643211 01 122444 45667787765555544421 22222 2478999
Q ss_pred HHhhhhCCeEEEEeeCCCCcccc----cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc-ccccCCCceE
Q 011057 196 VEMVDENTICVAAILGSTLNGEF----EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE-WDFRLPLVKS 270 (494)
Q Consensus 196 ~~~i~~~t~~vv~~~~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~D~ 270 (494)
++++.+++++|++.-.+++.|.+ ..+++|.++|++| |+++++|++|.++. . ...... ..+++ ..|.
T Consensus 173 ~~~l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tG~G-r-~G~~~a~~~~gv-~pDi 243 (397)
T TIGR03246 173 KALISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRH------NALLIFDEVQTGVG-R-TGELYAYMHYGV-TPDI 243 (397)
T ss_pred HHHhccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhcCC-c-cccchhhhhcCC-CCCE
Confidence 99998777777777555556644 4599999999999 99999999996541 1 111111 11222 4677
Q ss_pred EEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHH
Q 011057 271 INVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHEN 350 (494)
Q Consensus 271 ~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~ 350 (494)
+++ .|.+.++..+|+++.++. .. +.+. ......++ +.++....+..++|+.+.. .+..++..++
T Consensus 244 ~t~--~K~lggG~pigav~~~~~-i~-~~~~-------~~~~~~t~--~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~ 307 (397)
T TIGR03246 244 LTS--AKALGGGFPIGAMLTTTE-IA-AHLK-------VGTHGTTY--GGNPLACAVAGKVLDLVNT---PELLAGVKQR 307 (397)
T ss_pred EEe--ehhhhCCcceeEEEEcHH-HH-Hhcc-------CCCcCCCC--CCCHHHHHHHHHHHHHHhh---ccHHHHHHHH
Confidence 754 587766677888887543 21 2211 11111122 2222344555566665543 3567888889
Q ss_pred HHHHHHHHhhCCC-eEEeecCC-CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChH
Q 011057 351 AMVLKEGLEKTGR-FNIVSKDE-GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRT 428 (494)
Q Consensus 351 a~~l~~~L~~~~~-~~~~~~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~ 428 (494)
.++|.++|++++. +.++.... ...++.+.+.+........+++.|.++|+++.. .+..++|++....+|++
T Consensus 308 ~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~-------~g~~~lR~~p~~~~t~~ 380 (397)
T TIGR03246 308 HDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALI-------AGPNVVRFAPSLVISDD 380 (397)
T ss_pred HHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEee-------cCCCEEEEeCCCCCCHH
Confidence 9999999988641 22222211 234555655321112356899999999998643 12357999988889999
Q ss_pred HHHHHHHHHHHHHHHH
Q 011057 429 LAERLVLDITKVLHEL 444 (494)
Q Consensus 429 ~id~~i~~l~~~~~~l 444 (494)
+++.+++.|+++++.+
T Consensus 381 ~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 381 DIDEGLARFERAIEQV 396 (397)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999998887653
No 269
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.79 E-value=6.8e-17 Score=164.03 Aligned_cols=292 Identities=18% Similarity=0.136 Sum_probs=186.9
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcch----HHHHHHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQV----CWEKFARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~----s~~~~~~~~ 174 (494)
++++.||+++|.+. .+++++|++|+..++.++..+ +++|+++...|. .+...+...
T Consensus 61 ~le~~lA~l~g~~~-------~v~~~sG~~Ai~~al~~l~~~-------------Gd~Vl~~~~~y~~t~~~~~~~~~~~ 120 (418)
T TIGR01326 61 VLEQRIAALEGGVA-------ALAVASGQAAITYAILNLAQA-------------GDNIVSSSYLYGGTYNLFKHTLKRL 120 (418)
T ss_pred HHHHHHHHHhCCCe-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEECCCcHHHHHHHHHHHHHc
Confidence 45666999999854 789999999999888776331 257888887764 344556778
Q ss_pred CCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 175 EVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
|++++.++. .|++++++++++++++|++.+++||+|.+.|+++|+++|+++ ++++++|++|+.+..
T Consensus 121 G~~v~~v~~------~d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~------~i~livD~t~~~~~~-- 186 (418)
T TIGR01326 121 GIEVRFVDP------DDPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAH------GVPLIVDNTFATPYL-- 186 (418)
T ss_pred CcEEEEECC------CCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECCCchhhc--
Confidence 999888874 278999999999999999999999999999999999999999 999999999986421
Q ss_pred cCCcccccccCCCceEEEEcCcccCCc-CCceEEEEEeCCCCcccccccccCCCCCCCC-Cc------------------
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLV-YAGIGWVIWRNKEDLPEELIFHINYLGADQP-TF------------------ 314 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~-p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~-~~------------------ 314 (494)
..+ + ..++|+++.+++||+.+ +..+|++++........ .... ..+..... ..
T Consensus 187 ~~~-----l-~~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~-~~~~-~~~~~~~~~q~a~~~~~~~~~~~~~~~~~ 258 (418)
T TIGR01326 187 CRP-----I-DHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWA-NGRF-PLFTTPDPSYHGLVFTETFGNPAFIVKAR 258 (418)
T ss_pred CCc-----h-hcCCeEEEECccccccCCccceEEEEEeccccccc-cccc-ccccCCCCccccchhhhhhchhhHHHHHH
Confidence 111 1 12689999999999966 34578888755322110 0000 00000000 00
Q ss_pred --cc--ccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-----------------Cc
Q 011057 315 --TL--NFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-----------------GV 373 (494)
Q Consensus 315 --~~--~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-----------------~~ 373 (494)
.+ .|.. ......|. ...+...+..++++..+++..+.+.|.+.+++..+.-|. ..
T Consensus 259 ~~~~~~~G~~--~~p~~a~~--~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~~~~~~~~~~~~~~g~g 334 (418)
T TIGR01326 259 VQLLRDLGAA--LSPFNAFL--LLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLASHPHHALAKKYLPKGFG 334 (418)
T ss_pred HHHHHhcCCC--CCHHHHHH--HHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhccCCCc
Confidence 00 0000 01122332 233444556677777788899999999998876433221 23
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHhcCceee-----c-cccCCC--------------CCCceEEEEEeccCCChHHHHHH
Q 011057 374 PLVAFSLKDNKRHDEFEVAELLRRFGWIVP-----A-YTMPAD--------------AQHITVLRVVIREDFSRTLAERL 433 (494)
Q Consensus 374 ~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~-----~-~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~ 433 (494)
++++|.+++. ......+.++|.=-...++ + ...|.. .-..+.+|+|++- |+.+.+
T Consensus 335 ~~~s~~l~~~-~~~~~~f~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dl 409 (418)
T TIGR01326 335 AVLSFEIKGG-REAGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPGLIRLSVGI----ENIDDI 409 (418)
T ss_pred ceEEEEecCC-HHHHHHHHHhCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecC----CCHHHH
Confidence 4889998542 1123455555542111100 0 001110 0113579999985 778888
Q ss_pred HHHHHHHH
Q 011057 434 VLDITKVL 441 (494)
Q Consensus 434 i~~l~~~~ 441 (494)
++||++++
T Consensus 410 ~~dl~~Al 417 (418)
T TIGR01326 410 IADLEQAL 417 (418)
T ss_pred HHHHHHhh
Confidence 99998876
No 270
>PRK04311 selenocysteine synthase; Provisional
Probab=99.79 E-value=1.5e-16 Score=161.60 Aligned_cols=322 Identities=17% Similarity=0.110 Sum_probs=196.5
Q ss_pred CChHHHHHHHHHHhcccC-CCCCC--ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNY-VDMDE--YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQN 143 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~-~~~~~--~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~ 143 (494)
+.++.+.+++.+++.... ..++. .+... ..+.+++.+++++|.+. ++++++++.|+.+++.++ .
T Consensus 97 ~l~~~v~eav~~~~~~~~~le~~l~~g~~g~-r~~~~e~~lA~l~Gae~-------a~vv~sgtaAl~l~l~~l-~---- 163 (464)
T PRK04311 97 LLSEAAIEAVTEAARGYSNLEYDLATGKRGS-RDRALAALLCALTGAED-------ALVVNNNAAAVLLALNAL-A---- 163 (464)
T ss_pred CCCHHHHHHHHHHHhcccccccchhhcccch-HHHHHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHh-C----
Confidence 456778888887775432 11111 11122 23467788999999964 778889999998776443 1
Q ss_pred HHHhcCCCCCCCeEEeCCCcchH------HHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCC--c
Q 011057 144 KRKAEGKPFDKPNIVTGANVQVC------WEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTL--N 215 (494)
Q Consensus 144 ~~~~~g~~~~~~~vi~~~~~h~s------~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~--t 215 (494)
.+++||+++..|+. +...++..|++++.++.+. ..++++++++|+++|++|++++++|+ +
T Consensus 164 ---------~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~---~t~~~dle~aI~~~TklV~~vh~sN~~i~ 231 (464)
T PRK04311 164 ---------AGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN---RTHLRDYEQAINENTALLLKVHTSNYRIE 231 (464)
T ss_pred ---------CCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC---CCCHHHHHHhcCccCeEEEEEcCCCcccc
Confidence 12689998876652 3345677899999887643 46799999999999999999999987 3
Q ss_pred c--cccCHHHHHHHHHHhhcccCCCceEEEecccccccccc---c---CCcccccccCCCceEEEEcCcccCCcCCceEE
Q 011057 216 G--EFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF---L---YPELEWDFRLPLVKSINVSGHKYGLVYAGIGW 287 (494)
Q Consensus 216 G--~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~---~---~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~ 287 (494)
| ...|+++|+++||++ |+++++|+++|... ++ . .+.. .+.-..++|++++|+|||+++| ..|+
T Consensus 232 G~~~~~dl~eI~~lak~~------gi~vivD~gsG~l~-~~~~~gl~~~p~~-~~~l~~GaDiv~fSg~K~LgGp-~~G~ 302 (464)
T PRK04311 232 GFTKEVSLAELAALGKEH------GLPVVYDLGSGSLV-DLSQYGLPDEPTV-QELLAAGVDLVTFSGDKLLGGP-QAGI 302 (464)
T ss_pred ccCCcCCHHHHHHHHHHc------CCeEEEECCCcccc-cchhccCCCCCch-hhHHhcCCcEEEecCcccccCC-ceEE
Confidence 5 567999999999999 99999999755321 11 0 1110 0111248999999999999877 4788
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh-c-------H---hHHHHHHHHHHHHHHHHHH
Q 011057 288 VIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL-G-------F---EGYRNVMENCHENAMVLKE 356 (494)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l-~-------~---~g~~~~~~~~~~~a~~l~~ 356 (494)
++.+++ .+ +.+...+ .... + .-....+.++.+.+..+ . . ..+....++..+++..+.+
T Consensus 303 i~g~~~-li-~~l~~~~-~~r~------l--r~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~ 371 (464)
T PRK04311 303 IVGKKE-LI-ARLKKHP-LKRA------L--RVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAA 371 (464)
T ss_pred EEEcHH-HH-HHHhhch-hHHH------H--hcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHH
Confidence 877543 22 1111100 0000 0 00012233344444321 1 1 1123344667778888888
Q ss_pred HHhhCC--C--eEEeecC----------CCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEec
Q 011057 357 GLEKTG--R--FNIVSKD----------EGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIR 422 (494)
Q Consensus 357 ~L~~~~--~--~~~~~~~----------~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~ 422 (494)
.|++.+ + +++.... ...+-+.+.+.+. +.+..++.++|++-..-|-+.. ..+ .+.+-++
T Consensus 372 ~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~-~~~~~~l~~~lr~~~~~i~~r~----~~~--~~~ld~r 444 (464)
T PRK04311 372 ALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPK-DRSLEALAARLRLLPPPVIGRI----EDG--RLLLDLR 444 (464)
T ss_pred HHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCC-CCCHHHHHHHHhcCCCCEEEEE----ECC--EEEEEeC
Confidence 888764 2 3555331 1345566666542 5678899999997443221111 122 2434443
Q ss_pred cCCChHHHHHHHHHHHHHH
Q 011057 423 EDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 423 ~~~t~~~id~~i~~l~~~~ 441 (494)
...++|++.+++.|++++
T Consensus 445 -~~~~~~~~~~~~~~~~~~ 462 (464)
T PRK04311 445 -TLEEEDEERLAAALLEAL 462 (464)
T ss_pred -cCCHHHHHHHHHHHHHHh
Confidence 345677777777777664
No 271
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.79 E-value=2.5e-17 Score=161.97 Aligned_cols=323 Identities=17% Similarity=0.130 Sum_probs=194.7
Q ss_pred ChHHHHHHHHHHhcccCC-------CCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 011057 68 MEPECDKLMMAAINKNYV-------DMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRK 140 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~-------~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~ 140 (494)
.+|.+.+++...+.+-+. .|.......++|.-+.+.++++||++++ .....+-..+|+.||+.++.++.++
T Consensus 32 ~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~--~w~anvqp~SGs~An~av~~aLl~p 109 (399)
T PF00464_consen 32 MSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPK--EWYANVQPHSGSQANLAVYMALLKP 109 (399)
T ss_dssp --HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STT--TEEEE---SSHHHHHHHHHHHHT-T
T ss_pred cCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcc--cceEEeecCCchHHHHHHHHHHHhh
Confidence 357777777666554221 1233446778999999999999999852 1233455669999999888888542
Q ss_pred HHHHHHhcCCCCCCCeEEeCCC---cchHHHHHHHH-------cCCeeEEEeccCCccccCHHHHHHhhhh-CCeEEEEe
Q 011057 141 WQNKRKAEGKPFDKPNIVTGAN---VQVCWEKFARY-------FEVELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAAI 209 (494)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~~---~h~s~~~~~~~-------~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~ 209 (494)
+++|+.-+. .|.+....... ...++..++++++++.+|.+++++.+.+ +|++|++-
T Consensus 110 -------------GD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G 176 (399)
T PF00464_consen 110 -------------GDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICG 176 (399)
T ss_dssp -------------T-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE
T ss_pred -------------cCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEEC
Confidence 256664333 44443332222 3456778888866789999999998876 57766554
Q ss_pred eCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEE
Q 011057 210 LGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVI 289 (494)
Q Consensus 210 ~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~ 289 (494)
..+++ ...|++++.+||++. |++|++|.+|-.|.+ ....++..+ +.+|+++++.||.+.+|.| |+++
T Consensus 177 ~S~y~--~~~d~~~~reIad~v------ga~l~~D~sH~~GLI--a~g~~~~P~--~~ADvvt~sThKtl~GPrg-giI~ 243 (399)
T PF00464_consen 177 ASSYP--RPIDFKRFREIADEV------GAYLMADISHIAGLI--AGGLFPNPF--PYADVVTGSTHKTLRGPRG-GIIL 243 (399)
T ss_dssp -SSTS--S---HHHHHHHHHHT------T-EEEEE-TTTHHHH--HTTSS--GC--CTSSEEEEESSGGG-SSS--EEEE
T ss_pred chhcc--CccCHHHHHHHHHhc------CcEEEecccccccce--ehheecCcc--ccceEEEeeccccccccCc-eEEE
Confidence 33332 345799999999999 999999999965543 222222222 4699999999999988865 7777
Q ss_pred EeCCCC-c-------ccccccc--cCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHh
Q 011057 290 WRNKED-L-------PEELIFH--INYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLE 359 (494)
Q Consensus 290 ~~~~~~-~-------~~~~~~~--~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~ 359 (494)
+++... . ...+... ...+. .+.+......++++..+++......++++.++..++++.|.+.|.
T Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~I~~avfP------~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~ 317 (399)
T PF00464_consen 244 TNKGSKNVDKKGKEIDEELAEKIDSAVFP------GLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQ 317 (399)
T ss_dssp ES-SEEEE-TTS-EEEHHHHHHHHHHHTT------TT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCccccCCcccccHHHHHHHhccccCC------CcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHh
Confidence 762100 0 0000000 00011 112333345667777788776556678999999999999999999
Q ss_pred hCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCC--CceEEEEEeccCCC
Q 011057 360 KTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQ--HITVLRVVIREDFS 426 (494)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~--~~~~lRvs~~~~~t 426 (494)
+.| ++++.......+|.+.+.. .+++..+..++|.+-||.+..-..|.+.. ....+|+....-++
T Consensus 318 ~~G-~~v~~ggTd~H~vlvd~~~-~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~ 384 (399)
T PF00464_consen 318 ERG-FKVVTGGTDNHQVLVDLRS-FGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTR 384 (399)
T ss_dssp HTT--EEGGGS-SSSEEEEEGGG-GTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHH
T ss_pred hCC-cEEEECCCCCCeEEEEecc-cccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHh
Confidence 987 9998765467788888753 35678889999999999987655665421 23569999764333
No 272
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.79 E-value=1.9e-16 Score=162.31 Aligned_cols=359 Identities=13% Similarity=0.051 Sum_probs=198.4
Q ss_pred ccccccCCChHHHHHHHHHH-hcccCCCCCCChhhH-HHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHH
Q 011057 60 LASFVTTWMEPECDKLMMAA-INKNYVDMDEYPVTT-ELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAF 137 (494)
Q Consensus 60 ~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~-~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~ 137 (494)
++.+.+..+++.+.+.+.++ +.. +|....+.. ..+..+..++.+.++......+...+++|+|+++|+.+++.++
T Consensus 99 l~~g~p~~~~~~~~~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l 175 (521)
T TIGR03801 99 YVIDQLGFDPDAFLYEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSL 175 (521)
T ss_pred hcCCCCCCCCCHHHHHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHH
Confidence 44444444444444444444 332 243333344 4444444677765543221111125899999999999887763
Q ss_pred HHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHc--CCeeEEEeccC-Cc-----cccCHHHHHHhhhhCCeEEEEe
Q 011057 138 KRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYF--EVELKEVKLSE-GY-----YVMDPVKAVEMVDENTICVAAI 209 (494)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~--G~~v~~v~~~~-~~-----~~~d~~~L~~~i~~~t~~vv~~ 209 (494)
.... .-..+++|+++.+.+..+...+++. |++++.+++++ +. |.+|.++|++++++++++|+++
T Consensus 176 ~~~~--------ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~ 247 (521)
T TIGR03801 176 KANE--------LLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVV 247 (521)
T ss_pred hHhh--------cCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEe
Confidence 2110 0012368999999999999888876 56666677653 22 7899999999988899999999
Q ss_pred eCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccC-CcCCce
Q 011057 210 LGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG-LVYAGI 285 (494)
Q Consensus 210 ~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l-~~p~g~ 285 (494)
+|+||||.+.+ +++|+++|++++. ++++++|++|+.+...+. +... . ...--++..++.|.+ ++++++
T Consensus 248 nP~NPTG~vls~e~l~~I~~ia~~~~~----~l~II~DEvY~~f~~~~~-sl~~-~--~~~~vI~v~SfSK~fg~~G~Rl 319 (521)
T TIGR03801 248 NPSNPPSVAMSDESIEKIVDIVANDRP----DLMILTDDVYGTFVDDFR-SLFA-E--LPYNTIGVYSFSKYFGATGWRL 319 (521)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCC----CeEEEECCCchhhccccc-chhh-h--CCCCEEEEEcchhhccCchhhh
Confidence 99999999966 6777888887521 899999999997642111 1001 0 111224445677765 788999
Q ss_pred EEEEEeCCCCcccc---c------ccccCCC--CCCCC----------------CcccccCcchHHH-HHHHHHHHHh--
Q 011057 286 GWVIWRNKEDLPEE---L------IFHINYL--GADQP----------------TFTLNFSKGSSQV-IAQYYQLIRL-- 335 (494)
Q Consensus 286 G~~~~~~~~~~~~~---~------~~~~~y~--~~~~~----------------~~~~~~s~~~~~~-~a~~~al~~l-- 335 (494)
|+++..+....... + .....|- ..... .....+....... .++.++..++
T Consensus 320 G~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~ 399 (521)
T TIGR03801 320 GTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDK 399 (521)
T ss_pred hhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhcc
Confidence 99987643211000 0 0000011 00000 0000111111111 1222233333
Q ss_pred cHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEE-EEecCCC--------------CCCHHHHHHHHHh-cC
Q 011057 336 GFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVA-FSLKDNK--------------RHDEFEVAELLRR-FG 399 (494)
Q Consensus 336 ~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~-f~~~~~~--------------~~~~~~l~~~L~~-~G 399 (494)
+....++..+.+.++++.+.+.| + +.+...++...+++ +.+.... ..+..+++.+|.+ .|
T Consensus 400 ~~~y~~~~~~~~~~R~~~l~~~L---g-~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~g 475 (521)
T TIGR03801 400 ENAYKAETKDICRRREKLLFRGL---G-LPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETG 475 (521)
T ss_pred chhHHHHHHHHHHHHHHHHHHhc---C-CCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCC
Confidence 23344566667777777888887 2 43322222344444 3432100 1245678877765 57
Q ss_pred ceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 400 WIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 400 i~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
+.+........ ....+|+|+.. .+.+++....+.|++++++.
T Consensus 476 V~v~PG~~Fg~--~~~~vRisla~-l~~~~~~~~~~rl~~~~~~~ 517 (521)
T TIGR03801 476 IVLLPGGGFGG--PEWSVRVSLAN-LNEYDYAEIGRAIRKILDEY 517 (521)
T ss_pred EEEeCchhcCC--CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Confidence 77633222211 23469999963 45566666666666665543
No 273
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.78 E-value=9.8e-17 Score=150.43 Aligned_cols=306 Identities=20% Similarity=0.209 Sum_probs=198.9
Q ss_pred CChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcc----
Q 011057 89 EYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQ---- 164 (494)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h---- 164 (494)
..|....+|++ ++.|-|--. .+.+++|..|+.++++.+... .++|+.++.-+
T Consensus 60 ~NPT~~vlE~R----iAaLEGG~a-------a~a~aSG~AA~~~ai~~la~a-------------GD~iVss~~LYGGT~ 115 (426)
T COG2873 60 MNPTTDVLEER----IAALEGGVA-------ALAVASGQAAITYAILNLAGA-------------GDNIVSSSKLYGGTY 115 (426)
T ss_pred cCchHHHHHHH----HHHhhcchh-------hhhhccchHHHHHHHHHhccC-------------CCeeEeeccccCchH
Confidence 45677777766 888877643 778899999999998887441 36788776644
Q ss_pred hHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 011057 165 VCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVD 244 (494)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (494)
.-+....+.+|+++++|+. .|++.++++|+++|++|.+-.-.||.+.+.|++.|+++||++ +++++||
T Consensus 116 ~lf~~tl~~~Gi~v~fvd~------~d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~------gvpliVD 183 (426)
T COG2873 116 NLFSHTLKRLGIEVRFVDP------DDPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRH------GVPLIVD 183 (426)
T ss_pred HHHHHHHHhcCcEEEEeCC------CCHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHc------CCcEEEe
Confidence 2344456888999999973 468999999999999999999999999999999999999999 9999999
Q ss_pred cccccccccccCCcccccccCCCceEEEEcCcccCCcC-CceEEEEEeCCCC-cc--ccc----ccccCCCCCCCCC-cc
Q 011057 245 AASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVY-AGIGWVIWRNKED-LP--EEL----IFHINYLGADQPT-FT 315 (494)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~G~~~~~~~~~-~~--~~~----~~~~~y~~~~~~~-~~ 315 (494)
...+..+ +....+ -++|+++-|..||+.+. ..+|.+++..... .. ..+ ...+.|.+-.... +.
T Consensus 184 NT~atpy---l~rP~~-----hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g 255 (426)
T COG2873 184 NTFATPY---LCRPIE-----HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFG 255 (426)
T ss_pred cCCCcce---ecchhh-----cCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcc
Confidence 9998743 333223 28999999999998653 3446666643321 10 000 1112222211100 00
Q ss_pred ---------cccCcch-HHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC--------------
Q 011057 316 ---------LNFSKGS-SQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-------------- 371 (494)
Q Consensus 316 ---------~~~s~~~-~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-------------- 371 (494)
..+.|.. ..+.+..+-+-..|.|.+.-+++++.+++..+.+.|++.|.+.-++-+.
T Consensus 256 ~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl 335 (426)
T COG2873 256 NAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYL 335 (426)
T ss_pred cHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhc
Confidence 0000000 0011222223445778888999999999999999999999876554321
Q ss_pred ---CccEEEEEecCCCCCCHHHHHHHHH------hcC----cee-eccccCC---------CCCCceEEEEEeccCCChH
Q 011057 372 ---GVPLVAFSLKDNKRHDEFEVAELLR------RFG----WIV-PAYTMPA---------DAQHITVLRVVIREDFSRT 428 (494)
Q Consensus 372 ---~~~~v~f~~~~~~~~~~~~l~~~L~------~~G----i~v-~~~~~~~---------~~~~~~~lRvs~~~~~t~~ 428 (494)
...+++|.+++.. .....+.+.|. .-| .++ +..+.-. ..-....+|+|++. |
T Consensus 336 ~~g~g~vltF~~kgg~-ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI----E 410 (426)
T COG2873 336 PKGAGAVLTFGVKGGY-EAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI----E 410 (426)
T ss_pred cCCCceEEEEEecChH-HHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc----C
Confidence 2348889986631 11233444332 222 222 1110000 01124679999985 7
Q ss_pred HHHHHHHHHHHHHHH
Q 011057 429 LAERLVLDITKVLHE 443 (494)
Q Consensus 429 ~id~~i~~l~~~~~~ 443 (494)
+++.+++||+++++.
T Consensus 411 d~~DiiaDl~qAl~~ 425 (426)
T COG2873 411 DIDDIIADLEQALEA 425 (426)
T ss_pred CHHHHHHHHHHHHhc
Confidence 888889999998764
No 274
>PLN02397 aspartate transaminase
Probab=99.78 E-value=1e-16 Score=163.29 Aligned_cols=336 Identities=13% Similarity=0.029 Sum_probs=196.1
Q ss_pred Ccccccc-cCC-ChHH----HHHHHHHHhccc-CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHH-
Q 011057 58 LNLASFV-TTW-MEPE----CDKLMMAAINKN-YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEA- 129 (494)
Q Consensus 58 ~~~~~~~-~~~-~~p~----~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a- 129 (494)
++++.+. +++ ..|. +.++....+..+ ...|....|..++++.+.+|+.+..+.+..+ +......+.+|+.+
T Consensus 51 l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~-~~i~~~~i~~g~Ga~ 129 (423)
T PLN02397 51 LNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKE-NRVATVQCLSGTGSL 129 (423)
T ss_pred EecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhc-CeeEeeecccchHHH
Confidence 5666653 333 2333 444433333322 2357777799999888887775443221100 11111213344333
Q ss_pred -HHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEec-cCCccccCHHHHHHhhh---hCCe
Q 011057 130 -IMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKL-SEGYYVMDPVKAVEMVD---ENTI 204 (494)
Q Consensus 130 -~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~~~i~---~~t~ 204 (494)
+..++..... .+++|++++++|+.+...++..|++++.+++ +++++.+|++.+++.+. ++++
T Consensus 130 ~l~~~~~~~~~-------------pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~ 196 (423)
T PLN02397 130 RLGAEFLARFY-------------PGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSF 196 (423)
T ss_pred HHHHHHHHHhC-------------CCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCE
Confidence 3333333211 1368999999999999999999999999998 33347899998888775 4567
Q ss_pred EEEEeeCCCCcccccC---HHHHHHHHHHhhcccCCCceEEEeccccccccccc-CCccc-ccccCCC-ceEEEEcCccc
Q 011057 205 CVAAILGSTLNGEFED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL-YPELE-WDFRLPL-VKSINVSGHKY 278 (494)
Q Consensus 205 ~vv~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~-~~~~~-~~~~~~~-~D~~~~~~hK~ 278 (494)
++++++++||||.+.+ +++|+++|+++ ++++++|++|..+...-. .+... ..+...+ --++..++.|.
T Consensus 197 ~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~------~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~ 270 (423)
T PLN02397 197 VLLHACAHNPTGVDPTPEQWEQISDLIKSK------NHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKN 270 (423)
T ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhC------CcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECccc
Confidence 8888899999999954 56788889999 999999999987642100 00000 0111111 12445577887
Q ss_pred CC-cCCceEEEEE--eCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHh--------HHHHHHHHH
Q 011057 279 GL-VYAGIGWVIW--RNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFE--------GYRNVMENC 347 (494)
Q Consensus 279 l~-~p~g~G~~~~--~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~--------g~~~~~~~~ 347 (494)
+. +++++||+++ .++..+.............. . .. .....+.++...+... .+++..+..
T Consensus 271 ~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~-----~-~~---~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~ 341 (423)
T PLN02397 271 MGLYGERVGALSVVCKSADVAVRVKSQLKLIARPM-----Y-SN---PPIHGASIVATILGDPELFSEWTKELKGMADRI 341 (423)
T ss_pred CCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcc-----c-CC---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 65 7899999863 22221110000000000000 0 00 1223344444444321 145667788
Q ss_pred HHHHHHHHHHHhhCC---CeEEeecCCCccEEEEEecCCCCCCHHHHHHHHH-hcCceeeccccCCCCCCceEEEEEecc
Q 011057 348 HENAMVLKEGLEKTG---RFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIRE 423 (494)
Q Consensus 348 ~~~a~~l~~~L~~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~ 423 (494)
.++++.+.+.|++++ ++++..+ +.++++|.- ++ .+++++|. +.|+.+. + .+ |+++..
T Consensus 342 ~~rr~~l~~~L~~~~~~~~~~~~~p--~gg~fl~~~-----l~-~~~~~~Ll~~~~V~v~----~---~~----Ri~~~~ 402 (423)
T PLN02397 342 ISMRQKLYDALEARGSPGDWSHITK--QIGMFSFTG-----LN-KEQVDRMTKEYHIYMT----R---DG----RISMAG 402 (423)
T ss_pred HHHHHHHHHHHHhcCCCCCCCcccC--CceEEEecC-----CC-HHHHHHHHHhCCEEEC----C---CC----eEEEee
Confidence 889999999999984 2554433 455655541 23 35888875 5578752 1 11 999863
Q ss_pred CCChHHHHHHHHHHHHHHH
Q 011057 424 DFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 424 ~~t~~~id~~i~~l~~~~~ 442 (494)
.+.+.++.+++.|+++++
T Consensus 403 -~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 403 -LSSKNVPYLADAIHAVVT 420 (423)
T ss_pred -CCHHHHHHHHHHHHHHHh
Confidence 577788888888888764
No 275
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=5.3e-18 Score=162.11 Aligned_cols=301 Identities=16% Similarity=0.078 Sum_probs=195.5
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHH
Q 011057 92 VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFA 171 (494)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~ 171 (494)
+..++.+++.+.+|+++|.+. +++.+-|...|.+.+-++..+ ...|+.++..|.++...|
T Consensus 179 G~~~~hkelE~l~A~f~g~e~-------a~vF~mGf~TNs~~~p~l~~~-------------gsLIiSDelNHaSi~~Ga 238 (519)
T KOG1357|consen 179 GTTEEHKELEELVARFLGVED-------AIVFSMGFATNSMNIPSLLGK-------------GSLIISDELNHASLITGA 238 (519)
T ss_pred ccHHHHHHHHHHHHHhcCCcc-------eEEEeccccccccCcceeecC-------------Ccceeeccccchheeccc
Confidence 778889999999999999986 444444444443333333221 246788889999999999
Q ss_pred HHcCCeeEEEeccCCccccCHHHHHHhhhh-------CC-----eEEEEeeCCC-CcccccCHHHHHHHHHHhhcccCCC
Q 011057 172 RYFEVELKEVKLSEGYYVMDPVKAVEMVDE-------NT-----ICVAAILGST-LNGEFEDVKLLNDLLAEKNKETGWD 238 (494)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-------~t-----~~vv~~~~~~-~tG~~~~l~~I~~la~~~~~~~~~~ 238 (494)
++.|+.++.+..+ |+..||+.+.+ +| +++++.-+-+ +-|.+.++.++.+++|+| .
T Consensus 239 RLSgAtiRVfkHN------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkky------k 306 (519)
T KOG1357|consen 239 RLSGATTRVFRHN------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKY------K 306 (519)
T ss_pred cccCceEEEEecC------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccc------c
Confidence 9999999999854 34445444432 22 4555555555 669999999999999999 9
Q ss_pred ceEEEecccccccccccCCcccccc--cCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCccc
Q 011057 239 TPIHVDAASGGFIAPFLYPELEWDF--RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTL 316 (494)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~~~~~--~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 316 (494)
.++++|+||+.++.+-.......-+ .-..+|.+...+.|.+.+ +|..+..++ .+.+. +.........
T Consensus 307 ayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga---~GGyiagsk-~lid~-------lrt~s~~~~y 375 (519)
T KOG1357|consen 307 AYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGA---AGGYIAGSK-ELIDY-------LRTPSPSALY 375 (519)
T ss_pred EEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccc---ccceecCcH-HHHhh-------hccCCCceee
Confidence 9999999999876532221111111 223589999999998853 333443333 22222 2221111111
Q ss_pred ccCcchHHHHHH-HHHHHHh-c---HhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHH
Q 011057 317 NFSKGSSQVIAQ-YYQLIRL-G---FEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEV 391 (494)
Q Consensus 317 ~~s~~~~~~~a~-~~al~~l-~---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l 391 (494)
..+-+ +.++.+ ..+++.+ | .+.-++.++++.++++|++..|+..+ |.+.... ..+++.+.+..+. ....+
T Consensus 376 at~~s-ppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~g-fivyG~~-dSpVvplll~~~~--k~~~f 450 (519)
T KOG1357|consen 376 ATSLS-PPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMG-FIVYGNN-DSPVVPLLLYGPA--KIVAF 450 (519)
T ss_pred cccCC-hHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCc-EEEecCC-CCCcceeeecCcc--cccHH
Confidence 11222 222222 2334333 3 34457888899999999999999987 8888765 4555554443331 33478
Q ss_pred HHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 392 AELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 392 ~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
.+.|.++++.+....+|+.+.-....|++.+.++|.|+++++++.+.++
T Consensus 451 ~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~ 499 (519)
T KOG1357|consen 451 SREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRV 499 (519)
T ss_pred HHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhh
Confidence 8899999888766667765544556899999999998888777665544
No 276
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.77 E-value=6.9e-16 Score=155.48 Aligned_cols=332 Identities=16% Similarity=0.077 Sum_probs=198.1
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.+++... . ......+++.++.+++++..+.+ .++++++|++
T Consensus 27 ~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~la~~l~~~~~~~-------~~~~~~sG~~ 97 (377)
T PRK02936 27 NGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWH-V-SNLFTNSLQEEVASLLAENSAGD-------LVFFCNSGAE 97 (377)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccc-c-ccccCCHHHHHHHHHHHhcCCCC-------EEEEeCCcHH
Confidence 45555544443 2234678899999888875322 1 11233567777778888776653 3899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEe-CCCcchHHHHHHHHcCCeeE---EEeccCC-cc--ccCHHHHHHhhhh
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIVT-GANVQVCWEKFARYFEVELK---EVKLSEG-YY--VMDPVKAVEMVDE 201 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~~v~---~v~~~~~-~~--~~d~~~L~~~i~~ 201 (494)
|+..++..++.. .| +.+|++ ....|.+........|.... ..+..++ .. .-|++++++.+.+
T Consensus 98 a~~~A~~~a~~~-------~g----~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~ 166 (377)
T PRK02936 98 ANEAALKLARKH-------TG----KSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE 166 (377)
T ss_pred HHHHHHHHHHHh-------cC----CCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC
Confidence 999999877542 11 234554 45677665554444332110 1111110 00 1278999999988
Q ss_pred CCeEEEEeeCCCCccccc----CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccCCCceEEEEcCc
Q 011057 202 NTICVAAILGSTLNGEFE----DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRLPLVKSINVSGH 276 (494)
Q Consensus 202 ~t~~vv~~~~~~~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~h 276 (494)
++++|++....++.|... .+++|.++|++| ++++++|++|.++.. ....... .+++ ..|.++ ..
T Consensus 167 ~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~------~~~lI~DEv~~g~g~--~g~~~~~~~~~~-~~di~t--~s 235 (377)
T PRK02936 167 EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKF------GALLIIDEVQTGIGR--TGTLFAYEQFGL-DPDIVT--VA 235 (377)
T ss_pred CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CchhhHHHhhCC-CCcEEE--Ec
Confidence 888888877777777663 399999999999 999999999975321 1100000 1111 246554 56
Q ss_pred ccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHH
Q 011057 277 KYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKE 356 (494)
Q Consensus 277 K~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~ 356 (494)
|.+.++..+|+++.+++ .. +.+. ......+ ...++....+..++++.+.. ++..++..++.+++++
T Consensus 236 K~l~~G~~ig~v~~~~~-~~-~~~~-------~~~~~~t--~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~ 301 (377)
T PRK02936 236 KGLGNGIPVGAMIGKKE-LG-TAFG-------PGSHGST--FGGNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQ 301 (377)
T ss_pred ccccCCCccEEEEEcHH-HH-hhcc-------CCCCCCC--CCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHH
Confidence 88876666888776432 22 2111 1011111 12223444445555554422 2455666777777777
Q ss_pred HHhhC-CCeEEeec-CCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHH
Q 011057 357 GLEKT-GRFNIVSK-DEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLV 434 (494)
Q Consensus 357 ~L~~~-~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i 434 (494)
.|++. +++..+.. .....++.+.+.. +...+.+.|.++|+++.. .+..++|++.+..++++++++++
T Consensus 302 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~----~~~~~~~~l~~~gv~v~~-------~g~~~lRi~p~~~~~~~~i~~~i 370 (377)
T PRK02936 302 KLQEELEHLECVKNIRGKGLMIGIECTE----EVAPVIEQLREEGLLVLS-------AGPNVIRLLPPLVVTKEELDQAV 370 (377)
T ss_pred HHHHHHhhCCcEEeEeecceEEEEEecc----hHHHHHHHHHHCCeEEec-------CCCCEEEEECCcccCHHHHHHHH
Confidence 77763 22222211 1133566677643 266889999999998632 23457999987778999999888
Q ss_pred HHHHHH
Q 011057 435 LDITKV 440 (494)
Q Consensus 435 ~~l~~~ 440 (494)
+.|+++
T Consensus 371 ~~l~~~ 376 (377)
T PRK02936 371 YLLKKV 376 (377)
T ss_pred HHHHHh
Confidence 887765
No 277
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.76 E-value=4.8e-16 Score=157.50 Aligned_cols=290 Identities=17% Similarity=0.114 Sum_probs=178.1
Q ss_pred CCChHHHHHHHHHHhcccC-C--CCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHH
Q 011057 66 TWMEPECDKLMMAAINKNY-V--DMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (494)
Q Consensus 66 ~~~~p~~~~~~~~~~~~~~-~--~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~ 142 (494)
.+.++.+.+++.+++.... . ++...... ...+.+++.+++++|.+. .+++++++.|+.+++.++ .
T Consensus 91 s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g-~r~~~le~~lA~l~gae~-------alvv~sg~aAi~l~l~~l-~--- 158 (454)
T TIGR00474 91 APLAEEAIEAVTDAARGYSNLEYDLETGKRG-SRYSHVEGLLCELTGAED-------ALVVNNNAAAVLLALNTL-A--- 158 (454)
T ss_pred CCCCHHHHHHHHHHHhcccchhccccccccc-hHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHh-C---
Confidence 3456778888887776432 1 11111111 224567888999999975 667888999987776433 1
Q ss_pred HHHHhcCCCCCCCeEEeCCCcch------HHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCc-
Q 011057 143 NKRKAEGKPFDKPNIVTGANVQV------CWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLN- 215 (494)
Q Consensus 143 ~~~~~~g~~~~~~~vi~~~~~h~------s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~t- 215 (494)
.+++||+++..|. ++...++..|++++.++.+. ..|+++++++|+++|++|++++.+|++
T Consensus 159 ----------~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~---~~~l~dle~aI~~~T~lv~~~h~sN~~~ 225 (454)
T TIGR00474 159 ----------KGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN---RTHLKDYEDAITENTALLLKVHTSNYRI 225 (454)
T ss_pred ----------CcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC---CCCHHHHHHhcCcCCEEEEEEccCcccc
Confidence 1268999987653 34456677899999887643 468999999999999999999998874
Q ss_pred -c--cccCHHHHHHHHHHhhcccCCCceEEEeccccccccc---ccCCc--ccccccCCCceEEEEcCcccCCcCCceEE
Q 011057 216 -G--EFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAP---FLYPE--LEWDFRLPLVKSINVSGHKYGLVYAGIGW 287 (494)
Q Consensus 216 -G--~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~---~~~~~--~~~~~~~~~~D~~~~~~hK~l~~p~g~G~ 287 (494)
| .+.|+++|+++||++ |++++||++.|... + +..+. ...+....++|++++|+|||+++|. .|+
T Consensus 226 ~G~~~~~dl~~I~~la~~~------g~~vivD~~sG~l~-~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~-~G~ 297 (454)
T TIGR00474 226 VGFTEEVSIAELVALGREH------GLPVMEDLGSGSLV-DLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ-AGI 297 (454)
T ss_pred cCCCCCCCHHHHHHHHHHc------CCeEEEECCCcccc-cchhccCCCCcccccHhHcCCCEEEecCccccCCCe-EEE
Confidence 6 478999999999999 99999998754321 1 10000 0012223489999999999998874 688
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh-----------cHhHHHHHHHHHHHHHHHHHH
Q 011057 288 VIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL-----------GFEGYRNVMENCHENAMVLKE 356 (494)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l-----------~~~g~~~~~~~~~~~a~~l~~ 356 (494)
++.+++ .+ +.+... .+... +...+ ..+.++.+.+..+ +..-+....++..+++..+.+
T Consensus 298 i~g~~~-~i-~~l~~~-~l~r~------lr~~k--~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~ 366 (454)
T TIGR00474 298 IVGKKE-LI-ERLKKN-PLTRA------LRVDK--LTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAK 366 (454)
T ss_pred EEECHH-HH-Hhhhhc-hhHHH------HhhCh--HHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHH
Confidence 877653 22 111111 11000 00000 0111112222111 112223345566677788888
Q ss_pred HHhhC--CC--eEEeecC--------C--CccEEEEEecCCCCCCHHHHHHHHHhcCc
Q 011057 357 GLEKT--GR--FNIVSKD--------E--GVPLVAFSLKDNKRHDEFEVAELLRRFGW 400 (494)
Q Consensus 357 ~L~~~--~~--~~~~~~~--------~--~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi 400 (494)
.|++. ++ .++.... + ..+-+.+.+.+ .+.+..++.++|++...
T Consensus 367 ~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~-~~~~~~~l~~~lr~~~~ 423 (454)
T TIGR00474 367 RLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTP-DGLSAEKLEARLRELPP 423 (454)
T ss_pred HHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEec-CCCCHHHHHHHHhcCCC
Confidence 88764 33 3455433 1 24555666644 25678899999997663
No 278
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.76 E-value=9.6e-16 Score=155.56 Aligned_cols=348 Identities=12% Similarity=-0.005 Sum_probs=208.1
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++........ .......++.+.|+++++.+ .+.++++|+|
T Consensus 37 dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~-------~v~~~~sGse 107 (406)
T PRK12381 37 QGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNG--YTNEPVLRLAKKLIDATFAD-------RVFFCNSGAE 107 (406)
T ss_pred CCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCc--cCCHHHHHHHHHHHhhCCCC-------eEEEcCCcHH
Confidence 45555554442 22345788999998888652221111 12233445777788887654 3899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCCeeEE---EeccCC---ccccCHHHHHHhhhh
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEVELKE---VKLSEG---YYVMDPVKAVEMVDE 201 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~~v~~---v~~~~~---~~~~d~~~L~~~i~~ 201 (494)
|+..+++.++.....+ +. ..+..|+ .....|....-+....|..... .++.++ ....|++++++.+.+
T Consensus 108 A~e~Alk~ar~~~~~~----~~-~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 182 (406)
T PRK12381 108 ANEAALKLARKYAHDR----YG-SHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD 182 (406)
T ss_pred HHHHHHHHHHHHHhhc----CC-CCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC
Confidence 9999999987542211 10 1124454 4566777655444444422000 010000 013478999999987
Q ss_pred CCeEEEEeeCCCCccc-----ccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccCCCceEEEEcC
Q 011057 202 NTICVAAILGSTLNGE-----FEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRLPLVKSINVSG 275 (494)
Q Consensus 202 ~t~~vv~~~~~~~tG~-----~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~ 275 (494)
++.+|++ .|.+++|- ...+++|.++|++| ++++++|++|.++.. ....... .+++ ..|.++ .
T Consensus 183 ~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~------~~llI~DEv~tG~gr--~G~~~~~~~~~v-~pDi~t--~ 250 (406)
T PRK12381 183 QTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRH------NALLIFDEVQTGVGR--TGELYAYMHYGV-TPDVLT--T 250 (406)
T ss_pred CeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEcchhhCCCC--CcchhhhHhhCC-CCCEEE--e
Confidence 7766666 67777764 35689999999999 999999999965421 1111110 1222 356654 4
Q ss_pred cccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHH
Q 011057 276 HKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLK 355 (494)
Q Consensus 276 hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~ 355 (494)
.|.+.+++.+|+++.+++ .. +.+. ......+ +..++....+..++|+.+..+ +..++..++.++|.
T Consensus 251 sK~l~gG~~ig~~~~~~~-~~-~~~~-------~~~~~~t--~~~~pl~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~ 316 (406)
T PRK12381 251 AKALGGGFPIGAMLTTEK-CA-SVMT-------VGTHGTT--YGGNPLASAVAGKVLELINTP---EMLNGVKQRHDWFV 316 (406)
T ss_pred hhhhhCCCceEEEEEcHH-HH-hhcC-------CCCCCCC--CCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHH
Confidence 598877777898887543 21 2111 0001111 122234445555666665432 46778888899999
Q ss_pred HHHhhCC-CeEEeecCC-CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHH
Q 011057 356 EGLEKTG-RFNIVSKDE-GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERL 433 (494)
Q Consensus 356 ~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~ 433 (494)
+.|+++. .+.++.... ...++.+.+..........+.+.|.++|+++... +...+|++....+|+++++++
T Consensus 317 ~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~-------g~~~lRl~p~~~~t~~~i~~~ 389 (406)
T PRK12381 317 ERLNTINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA-------GPNVVRFAPALNISEEEITTG 389 (406)
T ss_pred HHHHHHHhhCCCEEEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeC-------CCCEEEEeCCccCCHHHHHHH
Confidence 9998763 122222221 2334556653311113567889999999987421 234799999888899999999
Q ss_pred HHHHHHHHHHHhcC
Q 011057 434 VLDITKVLHELDSL 447 (494)
Q Consensus 434 i~~l~~~~~~l~~~ 447 (494)
++.|+++++++.+.
T Consensus 390 ~~~l~~~l~~~~~~ 403 (406)
T PRK12381 390 LDRFARACERFVSR 403 (406)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999877554
No 279
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.76 E-value=3.1e-17 Score=162.03 Aligned_cols=268 Identities=15% Similarity=0.108 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCC
Q 011057 97 QNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEV 176 (494)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~ 176 (494)
..+.++.+|+++|.+. .-++++|+|.+|..++.++..+ ++.|+++..+|-|+..++.+.|+
T Consensus 68 I~eAe~~aA~~fGAd~------t~flvnGsT~g~~a~i~a~~~~-------------gd~VLv~RN~HkSv~~alil~ga 128 (417)
T PF01276_consen 68 IKEAEELAARAFGADK------TFFLVNGSTSGNQAMIMALCRP-------------GDKVLVDRNCHKSVYNALILSGA 128 (417)
T ss_dssp HHHHHHHHHHHHTESE------EEEESSHHHHHHHHHHHHHTTT-------------TCEEEEETT--HHHHHHHHHHTE
T ss_pred HHHHHHHHHHhcCCCe------EEEEecCchHHHHHHHHHhcCC-------------CCEEEEcCCcHHHHHHHHHHcCC
Confidence 3356677999999985 3566778888888887777442 36899999999999999999999
Q ss_pred eeEEEeccCC----ccccCH-----HHHHHhhhhCC--eE---EEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEE
Q 011057 177 ELKEVKLSEG----YYVMDP-----VKAVEMVDENT--IC---VAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIH 242 (494)
Q Consensus 177 ~v~~v~~~~~----~~~~d~-----~~L~~~i~~~t--~~---vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~ 242 (494)
.+++++...+ .+.+++ +.++++|.+.+ +. |++++||+. |.+.|+++|+++|+++ ++.|+
T Consensus 129 ~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~-Gv~~di~~I~~~~h~~------~~~ll 201 (417)
T PF01276_consen 129 IPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYY-GVCYDIKEIAEICHKH------GIPLL 201 (417)
T ss_dssp EEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TT-SEEE-HHHHHHHHCCT------ECEEE
T ss_pred eEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCC-eEEECHHHHHHHhccc------CCEEE
Confidence 9999876421 124566 99999998643 34 888888766 9999999999999999 99999
Q ss_pred EecccccccccccCCcccccccCCCce-------EEEEcCcccCCcCCceEEEEEeCCC-CcccccccccCCCCCCCCCc
Q 011057 243 VDAASGGFIAPFLYPELEWDFRLPLVK-------SINVSGHKYGLVYAGIGWVIWRNKE-DLPEELIFHINYLGADQPTF 314 (494)
Q Consensus 243 vD~a~~~~~~~~~~~~~~~~~~~~~~D-------~~~~~~hK~l~~p~g~G~~~~~~~~-~~~~~~~~~~~y~~~~~~~~ 314 (494)
||+|||... .|. +... ..-..++| .++-|.||.+.+-...+++.+++.. .-.+.+......+..
T Consensus 202 vDEAhGah~-~F~-~lp~-~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~T----- 273 (417)
T PF01276_consen 202 VDEAHGAHF-GFH-PLPR-SALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQT----- 273 (417)
T ss_dssp EE-TT-TTG-GCS-GGGT-TCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS------
T ss_pred EEccccccc-cCC-CCcc-chhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcC-----
Confidence 999998753 333 2222 11123678 9999999999988889999998875 221211111111111
Q ss_pred ccccCcchHHHHHHHHHHHHh-cHhHHHHHHHHHHHHHHHHHHHH---hhCCCeEEeecCC--Ccc--------------
Q 011057 315 TLNFSKGSSQVIAQYYQLIRL-GFEGYRNVMENCHENAMVLKEGL---EKTGRFNIVSKDE--GVP-------------- 374 (494)
Q Consensus 315 ~~~~s~~~~~~~a~~~al~~l-~~~g~~~~~~~~~~~a~~l~~~L---~~~~~~~~~~~~~--~~~-------------- 374 (494)
.|++..-++++-.+.+.+ +.+| ++..++..+++..++++| .++..|+++.+.. ..+
T Consensus 274 ---TSPSY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~ 349 (417)
T PF01276_consen 274 ---TSPSYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFE 349 (417)
T ss_dssp ---SS--HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--T
T ss_pred ---CChHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhch
Confidence 233333334455555666 4555 677888899999999999 5566677765531 000
Q ss_pred ------------EEEEEec--------CCCCCCHHHHHHHHHhcCcee
Q 011057 375 ------------LVAFSLK--------DNKRHDEFEVAELLRRFGWIV 402 (494)
Q Consensus 375 ------------~v~f~~~--------~~~~~~~~~l~~~L~~~Gi~v 402 (494)
=+++..+ ...+++...+.+.|+++||.+
T Consensus 350 ~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~ 397 (417)
T PF01276_consen 350 GLADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQV 397 (417)
T ss_dssp T--TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-
T ss_pred hcccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEE
Confidence 0122221 123678889999999999875
No 280
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.76 E-value=6.2e-16 Score=153.60 Aligned_cols=290 Identities=21% Similarity=0.169 Sum_probs=184.3
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH
Q 011057 90 YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK 169 (494)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (494)
.|....+| +.|+++.|.+. ++.+++|..|+..++.++.+. ++.|+++...+.....
T Consensus 54 nPt~~~le----~~la~Le~g~~-------a~~~~SGmaAi~~~l~~ll~~-------------Gd~iv~~~~~Y~~t~~ 109 (386)
T PF01053_consen 54 NPTVRALE----QRLAALEGGED-------ALLFSSGMAAISAALLALLKP-------------GDHIVASDDLYGGTYR 109 (386)
T ss_dssp -HHHHHHH----HHHHHHHT-SE-------EEEESSHHHHHHHHHHHHS-T-------------TBEEEEESSSSHHHHH
T ss_pred cccHHHHH----HHHHHhhcccc-------eeeccchHHHHHHHHHhhccc-------------CCceEecCCccCcchh
Confidence 34555555 55899998854 888999999998888877431 2678888877765544
Q ss_pred H----HHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCC-ceEEEe
Q 011057 170 F----ARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWD-TPIHVD 244 (494)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~-~~l~vD 244 (494)
. +...|+++..++. .|+++++++++++|++|++-.|+||+..+.||++|+++||++ | ++++||
T Consensus 110 ~~~~~l~~~gv~v~~~d~------~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~------g~~~~vVD 177 (386)
T PF01053_consen 110 LLEELLPRFGVEVTFVDP------TDLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEH------GDILVVVD 177 (386)
T ss_dssp HHHHCHHHTTSEEEEEST------TSHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHT------TT-EEEEE
T ss_pred hhhhhhcccCcEEEEeCc------hhHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHh------CCceEEee
Confidence 4 4446888888752 478999999999999999999999999999999999999999 8 999999
Q ss_pred cccccccccccCCcccccccCCCceEEEEcCcccCCcCCce--EEEEEeCCCCcccccccccCCCCCCCCCcccccCcch
Q 011057 245 AASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGI--GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGS 322 (494)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~--G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~ 322 (494)
.+++..+ ....+. .++|++..|..|++.+...+ |.+++++...+...+......++. .
T Consensus 178 nT~atp~---~~~pL~-----~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~----------~-- 237 (386)
T PF01053_consen 178 NTFATPY---NQNPLE-----LGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGA----------T-- 237 (386)
T ss_dssp CTTTHTT---TC-GGG-----GT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-----------B--
T ss_pred cccccee---eeccCc-----CCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCc----------c--
Confidence 9998743 222122 27999999999999765443 666655422221211111111111 1
Q ss_pred HHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCCCCC
Q 011057 323 SQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDNKRH 386 (494)
Q Consensus 323 ~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~ 386 (494)
.....+|..+ .|...+..++++..+++..+.+.|++.|.++ +..|. ...++++|.+++.. .
T Consensus 238 ~~p~da~ll~--rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~-~ 314 (386)
T PF01053_consen 238 LSPFDAWLLL--RGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGE-E 314 (386)
T ss_dssp --HHHHHHHH--HHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHH-H
T ss_pred chHHHHHHHh--cCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccch-h
Confidence 1222333333 3556678899999999999999999999886 55542 13469999996531 1
Q ss_pred CHHHHHHHHHhc--Ccee----eccccCCC--------------CCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 387 DEFEVAELLRRF--GWIV----PAYTMPAD--------------AQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 387 ~~~~l~~~L~~~--Gi~v----~~~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
....+.+.|.-- |... +....|.. .-....+|+|++- |+.+.++++|+++++
T Consensus 315 ~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl----Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 315 AARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL----EDPDDLIADLEQALE 386 (386)
T ss_dssp HHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S----S-HHHHHHHHHHHHH
T ss_pred hhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc----CCHHHHHHHHHHhcC
Confidence 234555555321 1111 00011211 0123589999985 788999999998875
No 281
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.76 E-value=2.7e-15 Score=152.30 Aligned_cols=339 Identities=13% Similarity=0.029 Sum_probs=201.2
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-++.+|.+.+++.+.+++.... ... .......++.+.|+++.+.+. +.++++|++
T Consensus 38 dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~-~~~-~~~~~~~~l~~~l~~~~~~~~-------~~~~~sGse 108 (403)
T PRK05093 38 QGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHI-SNV-FTNEPALRLAKKLIDATFAER-------VFFANSGAE 108 (403)
T ss_pred CCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcc-cCc-cCCHHHHHHHHHHHhhCCCCE-------EEEeCchHH
Confidence 45555554442 23346788999998888653221 110 112223456777888776543 899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeE-EeCCCcchHHHHHHHHcCC------------eeEEEeccCCccccCHHHH
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNI-VTGANVQVCWEKFARYFEV------------ELKEVKLSEGYYVMDPVKA 195 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~v-i~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~~~d~~~L 195 (494)
|+..++..++.....+ + ...+..| .+....|.+...+....|- ++..++ ..|++++
T Consensus 109 A~e~a~klar~~~~~~----~-~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l 177 (403)
T PRK05093 109 ANEAAFKLARRYACDR----H-GPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVP------FNDLAAV 177 (403)
T ss_pred HHHHHHHHHHHHHhhc----C-CCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeC------CCCHHHH
Confidence 9999999886543211 0 0112334 4566788765544333221 122222 2378999
Q ss_pred HHhhhhCCeEEEEeeCCCCccc-ccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccCCCce
Q 011057 196 VEMVDENTICVAAILGSTLNGE-FED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRLPLVK 269 (494)
Q Consensus 196 ~~~i~~~t~~vv~~~~~~~tG~-~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D 269 (494)
++.+.+++++|++. |.+++|. +.+ +++|.++|++| ++++++|++|+++.. ....... .+++ ..|
T Consensus 178 ~~~l~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~g~--~g~~~~~~~~~~-~pd 247 (403)
T PRK05093 178 KAVIDDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQH------NALLIFDEVQTGMGR--TGDLFAYMHYGV-TPD 247 (403)
T ss_pred HHHhcCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC--CccchhhhhcCC-CCC
Confidence 99998777777766 6666654 333 89999999999 999999999986421 1111110 1111 245
Q ss_pred EEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHH
Q 011057 270 SINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHE 349 (494)
Q Consensus 270 ~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~ 349 (494)
..+ ..|.+.+++.+|+++.++. .. +.+.. .....++ ..++....+..++|+.+.. .+..++..+
T Consensus 248 i~s--~sK~l~~G~rig~vv~~~~-i~-~~l~~-------~~~~~t~--~~~~~~~~aa~a~L~~~~~---~~~~~~~~~ 311 (403)
T PRK05093 248 ILT--SAKALGGGFPIGAMLTTAE-IA-SHFKV-------GTHGSTY--GGNPLACAVAEAVFDIINT---PEVLEGVKA 311 (403)
T ss_pred EEE--ecccccCCcceEEEEEcHH-HH-hhcCC-------CCCCCCC--CCCHHHHHHHHHHHHHHhh---ccHHHHHHH
Confidence 544 4588877778999987553 21 11110 0001111 1122333444455555532 245577888
Q ss_pred HHHHHHHHHhhCCC-eEEeecCC-CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCCh
Q 011057 350 NAMVLKEGLEKTGR-FNIVSKDE-GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSR 427 (494)
Q Consensus 350 ~a~~l~~~L~~~~~-~~~~~~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~ 427 (494)
+.+++.+.|++++. +.++...+ ...++.+.+.+....+..++++.|.++|+.+.. .+...+|++.+..++.
T Consensus 312 ~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~-------~g~~~lRl~~~~~~~~ 384 (403)
T PRK05093 312 RRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLV-------AGPDVLRFAPSLVIEE 384 (403)
T ss_pred HHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEec-------CCCCEEEEeCCCCCCH
Confidence 88999999988631 11221211 234455565321111456899999999988642 1335799998888899
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011057 428 TLAERLVLDITKVLHEL 444 (494)
Q Consensus 428 ~~id~~i~~l~~~~~~l 444 (494)
++++.+++.|+++++.+
T Consensus 385 ~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 385 ADIDEGLARFEKAVAKV 401 (403)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999998888654
No 282
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.76 E-value=1.2e-15 Score=149.25 Aligned_cols=305 Identities=15% Similarity=0.004 Sum_probs=204.4
Q ss_pred CChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecC-hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcch-
Q 011057 89 EYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVG-SSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQV- 165 (494)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g-gt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~- 165 (494)
.++.+.++.+++.+.|.++++.|.+ ..+++..| ||.+...++..+..+ +++++ +-...+.
T Consensus 43 Rs~~F~~i~~~~~~~Lr~Ll~~P~~----y~Vlfl~GggT~~~ea~~~Nll~~-------------g~~~~~~~~tG~fg 105 (364)
T PRK12462 43 RSSWFSSLLAQAEADLRDLLGIPDE----YGVVFLQGGSSLQFSMIPMNFSRP-------------GAAAPEYVTTGYWS 105 (364)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCC----CeEEEEeccHHHHHHHHHHHcCCC-------------CCcEEEEEeCCHHH
Confidence 4678889999999999999999752 34555554 777776666655321 13232 2223333
Q ss_pred -HHHHHHHHcCCeeEEEeccCC---ccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceE
Q 011057 166 -CWEKFARYFEVELKEVKLSEG---YYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPI 241 (494)
Q Consensus 166 -s~~~~~~~~G~~v~~v~~~~~---~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l 241 (494)
-+.+.++.+| ++..+....+ ....+++++ .+.++...|.+|+..|.+|...| ++.+.+ +.++
T Consensus 106 ~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETstGv~~~-----~~~~~~------~~ll 171 (364)
T PRK12462 106 RKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETVEGLQFP-----DAAGLP------DSPL 171 (364)
T ss_pred HHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCCceEecC-----cccccC------CCeE
Confidence 3455666677 6665543211 124555655 33456788999999999999986 333345 8899
Q ss_pred EEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCC--CCCcccccC
Q 011057 242 HVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGAD--QPTFTLNFS 319 (494)
Q Consensus 242 ~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~--~~~~~~~~s 319 (494)
++|++.+.+..|+ + ++..|.+..+++|.++ |+|+++++++++..- ......+.|+... ........|
T Consensus 172 vvD~sS~~~s~pi-------d--~~~~dvi~agsQKnlg-P~Gltvvivs~~al~-~~~~~~p~~ldy~~~~~~~s~~nT 240 (364)
T PRK12462 172 IADMSSDFMSRPF-------D--VEAYGMVYAHAQKNLG-PAGVTVAIIRRALLE-RVPDTLPPMLDFRTHVEHRSNYNT 240 (364)
T ss_pred EEEcCchhhCCCC-------C--hHHccEEEeeccccCC-CCceEEEEECHHHHh-hccccCCchhhHHHHHhcCCCCCC
Confidence 9999998765433 2 2356999999999997 889999999876431 1111122332210 001122358
Q ss_pred cchHHHHHHHHHHHHhcHh--HHHHHHHHHHHHHHHHHHHHhhCCCeEEeec-C--CCccEEEEEecCCCCCCHHHHHHH
Q 011057 320 KGSSQVIAQYYQLIRLGFE--GYRNVMENCHENAMVLKEGLEKTGRFNIVSK-D--EGVPLVAFSLKDNKRHDEFEVAEL 394 (494)
Q Consensus 320 ~~~~~~~a~~~al~~l~~~--g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~--~~~~~v~f~~~~~~~~~~~~l~~~ 394 (494)
++...+..+..+++.+.++ |++.+.+++.+.++.+++.|.+.++|..... + .+...|+|++.+. .-..+|.+.
T Consensus 241 Ppv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~--~l~~~f~~~ 318 (364)
T PRK12462 241 PPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQP--RLDTLFKEQ 318 (364)
T ss_pred chHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCCH--HHHHHHHHH
Confidence 8888888899999999877 9999999999999999999999986654322 1 1445677887542 235688899
Q ss_pred HHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 395 LRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 395 L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
..++|+...... ...+.+|+|+-+.++.++++.|++-+++.-+
T Consensus 319 a~~~gl~~lkGh-----r~vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 319 STEAGFCGLSGH-----RSIGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred HHHCCCccccCC-----cccCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 999998742111 1123499999999999998888877766543
No 283
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.76 E-value=9e-17 Score=159.99 Aligned_cols=285 Identities=18% Similarity=0.140 Sum_probs=183.6
Q ss_pred CChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCc----c
Q 011057 89 EYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANV----Q 164 (494)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~----h 164 (494)
..|...++|+. ++++.|.+. ++.+++|+.|+.+++.++.. . +++||++... +
T Consensus 62 ~~P~~~~lE~~----la~leg~~~-------av~~sSG~aAi~~al~all~--------~-----GD~Vl~~~~~yg~t~ 117 (384)
T PRK06434 62 GNPTVQAFEEK----YAVLENAEH-------ALSFSSGMGAITSAILSLIK--------K-----GKRILSISDLYGQTF 117 (384)
T ss_pred CChhHHHHHHH----HHHHhCCCc-------EEEeCCHHHHHHHHHHHHhC--------C-----CCEEEEecCccchHH
Confidence 44566666655 999999864 78899999999988877632 1 3678887653 3
Q ss_pred hHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEE
Q 011057 165 VCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHV 243 (494)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (494)
..+...+...|++++.+++++ +++.++ .+++++|++..++|+++.+.|+++|+++||++ + ++|
T Consensus 118 ~~~~~~~~~~Gi~v~fvd~~~~~~~~l~--------~~~tklv~~e~~snpt~~v~Di~~I~~la~~~------~--lvV 181 (384)
T PRK06434 118 YFFNKVLKTLGIHVDYIDTDRLNSLDFD--------PSNYDLIYAESITNPTLKVPDIKNVSSFCHEN------D--VIV 181 (384)
T ss_pred HHHHHHHHhcCcEEEEECCCChhheeec--------CCCeeEEEEEcCCCCCceeecHHHHHHHHHHc------C--eEE
Confidence 344466778899999999864 222222 12688999999999999999999999999999 8 567
Q ss_pred ecccccccccccCCcccccccCCCceEEEEcCcccCCcCCc--eEEEEEeCCCCcccccccccCCCCCCCCCcccccCcc
Q 011057 244 DAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKG 321 (494)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~ 321 (494)
|++++... ...... .++|++++|.||++.++.+ .|+++++++... ..+....... |..
T Consensus 182 D~t~~s~~---~~~pl~-----~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~-~~~~~~~~~~----------G~~- 241 (384)
T PRK06434 182 DATFASPY---NQNPLD-----LGADVVIHSATKYISGHSDVVMGVAGTNNKSIF-NNLVERRKTL----------GSN- 241 (384)
T ss_pred ECCCCCcc---cCCchh-----cCCCEEEeecccccCCCCCceEEEEecCcHHHH-HHHHHHHHhc----------CCC-
Confidence 99986542 211111 3799999999999987765 455555444321 1111000001 111
Q ss_pred hHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------CCccEEEEEecCCCCCCHHHH
Q 011057 322 SSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------EGVPLVAFSLKDNKRHDEFEV 391 (494)
Q Consensus 322 ~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------~~~~~v~f~~~~~~~~~~~~l 391 (494)
... .-+++...+-+.+..++++..+++..+.+.|+++|.++ +..|. ...++++|.+++ ......+
T Consensus 242 -~~~--~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~--~~~~~~f 316 (384)
T PRK06434 242 -PDP--IQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS--MEDVHKF 316 (384)
T ss_pred -CCH--HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC--HHHHHHH
Confidence 111 22334444556678899999999999999999999765 44432 135699999853 1223445
Q ss_pred HHHHHhc--Cceee---c-cccCCC--------------CCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 392 AELLRRF--GWIVP---A-YTMPAD--------------AQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 392 ~~~L~~~--Gi~v~---~-~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
.+.|.-- +.... + ...|.. .-....+|+|++- |+++.++++|+++++
T Consensus 317 ~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGl----Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 317 IRNLEIPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGI----EDIDDLIKDIENALS 383 (384)
T ss_pred HHhCCcceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHhc
Confidence 5554321 11110 0 001110 0113589999985 788888999998874
No 284
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.75 E-value=8.1e-16 Score=152.42 Aligned_cols=338 Identities=13% Similarity=0.100 Sum_probs=204.4
Q ss_pred CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
...+++.++-...+...-..|..+|.+.++|++ +++++|.+. ++.|++|+.|+.++. .+.
T Consensus 47 sgT~aMs~~q~a~~~~GDe~yag~~s~~~lE~~----va~~~G~~~-------av~v~sGT~Al~ll~-~l~-------- 106 (450)
T TIGR02618 47 SGTNAMSDKQWAGLMMGDEAYAGSRNFYHLERT----VRELYGFKY-------VVPTHQGRGAENLLS-QIA-------- 106 (450)
T ss_pred CCcHHHHHHHHHHhhhcchhhcCCCcHHHHHHH----HHHHHCCCe-------EEEcCCHHHHHHHHH-HhC--------
Confidence 334666665222222222347778888888876 888999975 899999999977543 221
Q ss_pred hcCCCCCCCeEEeCCCcchHHHHH-HHHcCCeeEEEecc---------CCccccCHHHHHHhhhhC----CeEEEEeeCC
Q 011057 147 AEGKPFDKPNIVTGANVQVCWEKF-ARYFEVELKEVKLS---------EGYYVMDPVKAVEMVDEN----TICVAAILGS 212 (494)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~s~~~~-~~~~G~~v~~v~~~---------~~~~~~d~~~L~~~i~~~----t~~vv~~~~~ 212 (494)
.. .+++| +.++|++...+ ....|+.+..++.+ +.++.+|+++|+++|+++ +.+|.+...+
T Consensus 107 ---l~-pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~ 180 (450)
T TIGR02618 107 ---IK-PGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTV 180 (450)
T ss_pred ---CC-CcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEec
Confidence 11 11344 66888666555 68888865555443 335789999999999863 3466667777
Q ss_pred CCc-ccc---cCHHHHHHHHHHhhcccCCCceEEEecccccccccccC---Ccc----cccc---cCCCceEEEEcCccc
Q 011057 213 TLN-GEF---EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLY---PEL----EWDF---RLPLVKSINVSGHKY 278 (494)
Q Consensus 213 ~~t-G~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~---~~~----~~~~---~~~~~D~~~~~~hK~ 278 (494)
|.. |.. .++++|.++|++| |+.+|.|+|+..+-.-|.. +.+ .++. -...+|++++|+||-
T Consensus 181 N~~GG~pvs~~~l~~I~elA~~~------Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd 254 (450)
T TIGR02618 181 NLAGGQPVSMANMREVRELCEAH------GIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKD 254 (450)
T ss_pred ccCCCeeCCHHHHHHHHHHHHHc------CCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccC
Confidence 755 677 6789999999999 9999999999763211210 000 0010 034799999999999
Q ss_pred CCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHH
Q 011057 279 GLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGL 358 (494)
Q Consensus 279 l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L 358 (494)
+++|.| |++.+++++...........| .+ ..++ |...+..+.++..+|...-. +...++....+++|.++|
T Consensus 255 ~~~~~G-G~l~~~d~~l~~k~r~~~~~~-eG-~~ty---Ggla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L 325 (450)
T TIGR02618 255 CLVNIG-GFLCMNDDEMFQSAKELVVVF-EG-MPSY---GGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKL 325 (450)
T ss_pred CCCCCc-eEEEeCCHHHHHHHHHHhhhc-CC-cccc---CchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHH
Confidence 998875 666667765543332222233 11 1111 22112233334444433222 245566677899999999
Q ss_pred hhCCCeEEeecCCCccEEEEEecC------CCCCCHHHHHHHHHh-cCce---eeccc---cCCCC----CCceEEEEEe
Q 011057 359 EKTGRFNIVSKDEGVPLVAFSLKD------NKRHDEFEVAELLRR-FGWI---VPAYT---MPADA----QHITVLRVVI 421 (494)
Q Consensus 359 ~~~~~~~~~~~~~~~~~v~f~~~~------~~~~~~~~l~~~L~~-~Gi~---v~~~~---~~~~~----~~~~~lRvs~ 421 (494)
.+.| +.++.+. ..+.|.+.... ........++..|.. .||- +.++. -|.+. .....+|+++
T Consensus 326 ~~~G-vpv~~p~-ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlai 403 (450)
T TIGR02618 326 KAAG-VPIVEPV-GGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTI 403 (450)
T ss_pred HHCC-CcccCCC-CcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeecc
Confidence 9995 8886554 56677665421 124456677776653 3432 11111 11111 1136789888
Q ss_pred c-cCCChHHHHHHHHHHHHHHHHHhcC
Q 011057 422 R-EDFSRTLAERLVLDITKVLHELDSL 447 (494)
Q Consensus 422 ~-~~~t~~~id~~i~~l~~~~~~l~~~ 447 (494)
. .-.|.+.+|...+.|..+.++-..+
T Consensus 404 prr~yt~~h~~~v~~~~~~~~~~~~~~ 430 (450)
T TIGR02618 404 PRRVYTYAHMDVVADGIIKLYKHRDDI 430 (450)
T ss_pred ccccccHhHHHHHHHHHHHHHhhHhhc
Confidence 3 4557777777776666666655443
No 285
>PRK07049 methionine gamma-lyase; Validated
Probab=99.74 E-value=1.6e-15 Score=153.96 Aligned_cols=289 Identities=16% Similarity=0.087 Sum_probs=184.6
Q ss_pred HHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHH----HHHcC
Q 011057 100 CVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKF----ARYFE 175 (494)
Q Consensus 100 ~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~----~~~~G 175 (494)
+++.||++.|.+. +++++||++|+..++.++... ++.|+++.+.|..+... ++..|
T Consensus 88 Le~~lA~leg~~~-------~iv~~sG~~Ai~~~l~al~~~-------------Gd~Vv~~~p~Y~~~~~~~~~~l~~~G 147 (427)
T PRK07049 88 VEDRLAVYEGAES-------AALFSSGMSAIATTLLAFVRP-------------GDVILHSQPLYGGTETLLAKTFRNFG 147 (427)
T ss_pred HHHHHHHHhCCCc-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEcCCCcccHHHHHHHHHHhcC
Confidence 4455999998754 888999999988777776431 26799999988776554 35578
Q ss_pred CeeEEEeccCCccccCHHHHHHhhh-----hCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccc
Q 011057 176 VELKEVKLSEGYYVMDPVKAVEMVD-----ENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGF 250 (494)
Q Consensus 176 ~~v~~v~~~~~~~~~d~~~L~~~i~-----~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~ 250 (494)
++++.++ + ..|++++++++. +++++|++.+|+||||.+.|+++|.++++..+..+..+++++||++|...
T Consensus 148 i~~v~~~--~---~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~ 222 (427)
T PRK07049 148 VGAVGFA--D---GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGP 222 (427)
T ss_pred cEEEEEe--C---CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccc
Confidence 8866665 1 256777777664 46899999999999999999999999998821100018999999998764
Q ss_pred cccccCCcccccccCCCceEEEEcCcccCCc--CCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHH
Q 011057 251 IAPFLYPELEWDFRLPLVKSINVSGHKYGLV--YAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQ 328 (494)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~--p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~ 328 (494)
.. ..+ . . .++|.+..|+.|++.+ ...+|+++. ++... +.+.......+. ......+
T Consensus 223 ~~--~~p-l--~---~g~divv~S~SK~~gG~~glr~G~vv~-~~~l~-~~l~~~~~~~g~------------~ls~~~a 280 (427)
T PRK07049 223 VF--QKP-L--E---HGADLSVYSLTKYVGGHSDLVAGAVLG-RKALI-RQVRALRSAIGT------------QLDPHSC 280 (427)
T ss_pred cc--CCc-c--c---cCCCEEEEcCceeecCCCCcEEEEEEC-CHHHH-HHHHHHHHhcCC------------CCCHHHH
Confidence 21 111 1 1 2578999999999874 345677663 33222 221111111110 1233445
Q ss_pred HHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---C--------------CccEEEEEecCCCCCCHHH
Q 011057 329 YYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---E--------------GVPLVAFSLKDNKRHDEFE 390 (494)
Q Consensus 329 ~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---~--------------~~~~v~f~~~~~~~~~~~~ 390 (494)
|.+++.+. .+..++++..+++..+.+.|++.++++ +..++ + ..++++|.+++. ......
T Consensus 281 ~l~~r~L~--tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~-~~~~~~ 357 (427)
T PRK07049 281 WMLGRSLE--TLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGG-QAAAFR 357 (427)
T ss_pred HHHHcCCC--hHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCC-HHHHHH
Confidence 66665553 466778888999999999999998765 33331 0 245899998642 112344
Q ss_pred HHHHHHhcC--cee----eccccCCCC--------------CCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 391 VAELLRRFG--WIV----PAYTMPADA--------------QHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 391 l~~~L~~~G--i~v----~~~~~~~~~--------------~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
+.+.|.=-. ... +....|... -..+.+|+|++- |+++.++++|+++++
T Consensus 358 f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 425 (427)
T PRK07049 358 FLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGI----EHPDDLIADLAQALD 425 (427)
T ss_pred HHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHHh
Confidence 555543211 111 000111100 113579999985 788889999999876
No 286
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.74 E-value=4.1e-15 Score=142.38 Aligned_cols=359 Identities=13% Similarity=0.070 Sum_probs=218.3
Q ss_pred CCCCCCHHHHHHHHHHhhhhcCCCCCcccccccCCC-hHHHHHHHHHH---hcc-cCCCCCCChhhHHHHHHHHHHHHHH
Q 011057 33 PENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWM-EPECDKLMMAA---INK-NYVDMDEYPVTTELQNRCVNIIARL 107 (494)
Q Consensus 33 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~---~~~-~~~~~~~~~~~~~le~~~~~~la~l 107 (494)
...+.++.++++.++.+...+......++.+++... ++.+..-+.+- +.. .+..++.+++..+..-+...++++|
T Consensus 53 ~~~~~sE~e~l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dL 132 (450)
T COG0403 53 LPKPLSEYEALAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADL 132 (450)
T ss_pred CCCCCCHHHHHHHHHHHHhcCchhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 344568999999999988765422222333444433 44443233211 110 1223344567777777889999999
Q ss_pred hCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHH----cCCeeEEEec
Q 011057 108 FNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARY----FEVELKEVKL 183 (494)
Q Consensus 108 ~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~----~G~~v~~v~~ 183 (494)
+|++.. +.-.--++|.+-- |+..+.+.... ...+++++...|+......+. +|++++.++.
T Consensus 133 TGm~VA-----NASm~DeaTAaAE-Am~ma~r~~k~---------k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~ 197 (450)
T COG0403 133 TGLDVA-----NASMLDEATAAAE-AMLMAKRVTKK---------KRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDA 197 (450)
T ss_pred hCCCcc-----cchhhhhHHHHHH-HHHHHHHhhcC---------cCceEEecCCCCHHHHHHHHhhcccCceEEEEecc
Confidence 999862 2323334444333 33333222100 125799999999876665443 4556666554
Q ss_pred cCCccccCHHHHHHhhhhCCeEEEEeeCCCCcc-cccCHHHHHHHHHHhhcccCCCceEEEeccc-ccccccccCCcccc
Q 011057 184 SEGYYVMDPVKAVEMVDENTICVAAILGSTLNG-EFEDVKLLNDLLAEKNKETGWDTPIHVDAAS-GGFIAPFLYPELEW 261 (494)
Q Consensus 184 ~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG-~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~-~~~~~~~~~~~~~~ 261 (494)
+ |.++|+++.+.++.+|++..|++. | ...++++|.+.+|++ +.+++|=.=- +.+ ++.|...
T Consensus 198 ~------d~~~l~~~~~~~~~gv~vQyP~~~-G~~~~d~~~l~~~~h~~------~al~~v~aDplaL~---LL~pPGe- 260 (450)
T COG0403 198 D------DLDDLESADDGDVFGVLVQYPNTF-GIVEEDLRALIEAAHSA------GALVIVAADPLALG---LLKPPGE- 260 (450)
T ss_pred c------hhhhhhhccccCeEEEEEecCCCC-CccchhHHHHHHHHhhc------CCEEEEEechhHhh---ccCCccc-
Confidence 3 778888883347899999999866 6 677899999999999 8877654311 111 2344333
Q ss_pred cccCCCceEEEEcCcccCC----cCCceEEEEEeCCCCcccccccc-----cCCCCCCCCCccc---------------c
Q 011057 262 DFRLPLVKSINVSGHKYGL----VYAGIGWVIWRNKEDLPEELIFH-----INYLGADQPTFTL---------------N 317 (494)
Q Consensus 262 ~~~~~~~D~~~~~~hK~l~----~p~g~G~~~~~~~~~~~~~~~~~-----~~y~~~~~~~~~~---------------~ 317 (494)
.|+|++..+++.++. +++.+|++.++++.. +.++-+ .+-.+......++ -
T Consensus 261 ----~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~--R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNI 334 (450)
T COG0403 261 ----FGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFK--RQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNI 334 (450)
T ss_pred ----cCCceEEecCcccCCCcCCCCcceeeeeEhHhHh--hcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhh
Confidence 389999999999863 345678888876531 111111 0101100000000 0
Q ss_pred cCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEeecCCCccEEEEEecCCCCCCHHHHHHHHH
Q 011057 318 FSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTG-RFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLR 396 (494)
Q Consensus 318 ~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (494)
||..+..+++....+.++|.+|++++.++.++++.++.++|++++ +++++.+. .+.-+.+++.. .....+.++..
T Consensus 335 CTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~-fFdt~~v~~~~---~~~~~l~~~~~ 410 (450)
T COG0403 335 CTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDH-FFDTFTVRVPE---EVAEALLAAAI 410 (450)
T ss_pred hHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEecccc-ceeeEEEecch---hHHHHHHHHHH
Confidence 222222223334445778999999999999999999999999765 58887663 56777777642 13456666666
Q ss_pred hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 397 RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 397 ~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
..|+-++... ...+=+++.+.+|+++|+.|++.+...
T Consensus 411 ~~G~~L~~~~-------~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 411 AGGINLRRVD-------ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred hcCCceeeec-------CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 7777654321 113568888889999988887776543
No 287
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.74 E-value=5.2e-15 Score=149.04 Aligned_cols=339 Identities=12% Similarity=-0.011 Sum_probs=208.5
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++...... .....+.+.++.++|++..+.+ .+.++++|+|
T Consensus 34 dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~--~~~~~~~~~~la~~l~~~~~~~-------~v~f~~SGse 104 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPS--PAFYNEPMAKLAGLLTQHSCFD-------KVFFANSGAE 104 (395)
T ss_pred CCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhccccc--ccccCHHHHHHHHHHhhccCCC-------EEEEeCCcHH
Confidence 45555554432 122446889888888776532211 1233556667777777765443 3899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeE-EeCCCcchHHHHHHHHcCCeeE---EEeccCC---ccccCHHHHHHhhhh
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNI-VTGANVQVCWEKFARYFEVELK---EVKLSEG---YYVMDPVKAVEMVDE 201 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~v-i~~~~~h~s~~~~~~~~G~~v~---~v~~~~~---~~~~d~~~L~~~i~~ 201 (494)
|+..++..++.... + + ...+.+| ......|.+...++...|.... ..|...+ ....|++++++.+.+
T Consensus 105 A~e~Aik~ar~~~~-~----~-~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 178 (395)
T PRK03715 105 ANEGAIKLARKWGR-K----H-KNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD 178 (395)
T ss_pred HHHHHHHHHHHHhh-c----c-CCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC
Confidence 99999999975321 0 0 0112344 4566788877776666553311 1111111 012578999999987
Q ss_pred CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccCCCceEEEEcCc
Q 011057 202 NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRLPLVKSINVSGH 276 (494)
Q Consensus 202 ~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~h 276 (494)
++.+|++.......|.+.| +++|.++|++| |+++++|+++.++. . ....... .+++ ..|.++++
T Consensus 179 ~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~------~~llI~DEv~tG~G-R-tG~~~a~~~~gv-~PDi~t~g-- 247 (395)
T PRK03715 179 KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQH------GLLLIVDEVQTGCG-R-TGTLFAYELSGI-EPDIMTLG-- 247 (395)
T ss_pred CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCC-C-CcchhhHhhcCC-CCceeeeh--
Confidence 7777777767667788877 99999999999 99999999998631 1 1111010 1222 36877653
Q ss_pred ccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHH
Q 011057 277 KYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKE 356 (494)
Q Consensus 277 K~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~ 356 (494)
|.+.++..+|.++.+++ .. . ...... ..++ +.++....+..++|+.+.++ +..++..++.++|++
T Consensus 248 K~lg~G~p~~av~~~~~-i~-~---~~~~~~-----~~T~--~g~pl~~aaala~L~~l~~~---~l~~~~~~~g~~l~~ 312 (395)
T PRK03715 248 KGIGGGVPLAALLAKAE-VA-V---FEAGDQ-----GGTY--NGNPLMTAVGVAVISQLLAP---GFLEGVRARGEYLKE 312 (395)
T ss_pred hhhhCCcceEEEEEccc-cc-c---ccCCCc-----CCCC--CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHH
Confidence 77766566777776654 21 1 111111 1122 22234555666777777543 467788888888888
Q ss_pred HHhhCC---CeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhc---CceeeccccCCCCCCceEEEEEeccCCChHHH
Q 011057 357 GLEKTG---RFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRF---GWIVPAYTMPADAQHITVLRVVIREDFSRTLA 430 (494)
Q Consensus 357 ~L~~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~---Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~i 430 (494)
+|+++. ++.-+. . ...++.+.+... ....+.+.+.+. |+++... ....+|++....+|++++
T Consensus 313 ~L~~l~~~~~i~~vr-G-~Glm~~i~l~~~---~~~~~~~~~~~~~~~Gi~~~~~-------~~~~lR~~p~l~~t~~ei 380 (395)
T PRK03715 313 KLLELSEERGLEGER-G-EGLLRALLLGKD---IGPQIVEKARDMQPDGLLLNAP-------RPNLLRFMPALNVTTEEI 380 (395)
T ss_pred HHHHHhhcCCcCeEE-c-ceeEEEEEecCc---hHHHHHHHHHhccCCCEEEeec-------CCCEEEEeCCcccCHHHH
Confidence 887651 132221 1 356777777431 223455555555 9886431 124699999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 011057 431 ERLVLDITKVLHEL 444 (494)
Q Consensus 431 d~~i~~l~~~~~~l 444 (494)
+.+++.|+++++.+
T Consensus 381 ~~~~~~l~~~l~~~ 394 (395)
T PRK03715 381 DQMIAMLRSVLDKL 394 (395)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999988764
No 288
>PLN02624 ornithine-delta-aminotransferase
Probab=99.74 E-value=1.1e-14 Score=149.95 Aligned_cols=327 Identities=13% Similarity=0.037 Sum_probs=194.8
Q ss_pred CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
+.+|.+.+++.+.+++....... ...+...++.+.|+++++.+. ..++++|+||+..+++.++..+..+
T Consensus 91 h~~p~v~~ai~~ql~~~~~~~~~--~~~~~~~~la~~L~~~~~~~~-------~~f~~SGseA~e~AlklAr~~~~~~-- 159 (474)
T PLN02624 91 HCHPKIIKALTEQAEKLTLSSRA--FYNDKFPEFAEYLTSMFGYDM-------VLPMNTGAEGVETAIKLARKWGYEK-- 159 (474)
T ss_pred CCCHHHHHHHHHHHHhcCCcccc--cCCHHHHHHHHHHHhhcCCCe-------EEEeCChHHHHHHHHHHHHHHHHhh--
Confidence 45789999998888764322111 223344456777888887643 8899999999999999887632211
Q ss_pred hcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCCccccCHHHHHHhhhh---CCeEEEEee
Q 011057 147 AEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEGYYVMDPVKAVEMVDE---NTICVAAIL 210 (494)
Q Consensus 147 ~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~~~d~~~L~~~i~~---~t~~vv~~~ 210 (494)
.|....+..|+ .....|....-+....|- .+..++ .-|++.|++.++. ++.+|++..
T Consensus 160 -~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~iaaiiiEp 232 (474)
T PLN02624 160 -KGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVD------FGDLDALEKIFEEDGDRIAAFLFEP 232 (474)
T ss_pred -cCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeC------CCCHHHHHHHHHhCCCCEEEEEECC
Confidence 11111122344 344456543333222221 122232 1367889888863 467788888
Q ss_pred CCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcC-Cce
Q 011057 211 GSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVY-AGI 285 (494)
Q Consensus 211 ~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~ 285 (494)
+.+++|.+.| +++|.++|++| |+++++|++|.++. ........+......|.++++ |.+.++ +.+
T Consensus 233 v~~~~G~v~p~~~~L~~l~~lc~~~------gillI~DEv~tG~G--rtG~~~a~~~~~i~pDiv~ls--K~lggG~~pi 302 (474)
T PLN02624 233 IQGEAGVVIPPDGYLKAVRELCSKH------NVLMIADEIQTGLA--RTGKMLACDWEEVRPDVVILG--KALGGGVIPV 302 (474)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCcC--cCcchhhHHhcCCCCCEEEec--ccccCCCCcc
Confidence 8889999877 99999999999 99999999997531 111111111111246777764 766554 567
Q ss_pred EEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhC----
Q 011057 286 GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKT---- 361 (494)
Q Consensus 286 G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~---- 361 (494)
|+++.+++ .+ ..+. .. ....++ ..+.....+..++|+.+.+++ ..++..++.++|++.|+++
T Consensus 303 gav~~~~~-i~-~~~~--~~-----~~~~T~--~g~pl~~aaa~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~~~ 368 (474)
T PLN02624 303 SAVLADKD-VM-LCIK--PG-----EHGSTF--GGNPLASAVAMAALQVVQDEK---LAERSAKLGQELRDQLQKIQKQF 368 (474)
T ss_pred eeeeecHH-HH-hHhc--cC-----CcCCCC--CCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHhC
Confidence 88776542 22 1110 00 001111 222344455556666655433 4455566677777777664
Q ss_pred CC-eEEeecCCCccEEEEEecCCC--CCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 362 GR-FNIVSKDEGVPLVAFSLKDNK--RHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 362 ~~-~~~~~~~~~~~~v~f~~~~~~--~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
+. +.-+. + ...++.+.+.... .....++++.|.++|+++.. .+..++|++....+|.++++.+++.|+
T Consensus 369 ~~~i~~vr-g-~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p-------~~~~~lR~~p~l~~t~e~id~~l~~L~ 439 (474)
T PLN02624 369 PKLIKEVR-G-RGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKP-------THDTIIRLAPPLSISEDELQECSKALS 439 (474)
T ss_pred CCceEEEE-e-eEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEec-------CCCCEEEEECCccCCHHHHHHHHHHHH
Confidence 21 21111 1 3445666664321 12356789999999998632 134679999888899999999999998
Q ss_pred HHHHHH
Q 011057 439 KVLHEL 444 (494)
Q Consensus 439 ~~~~~l 444 (494)
++++.-
T Consensus 440 ~~l~~~ 445 (474)
T PLN02624 440 DVLEHD 445 (474)
T ss_pred HHHHHH
Confidence 887543
No 289
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=6.9e-15 Score=141.78 Aligned_cols=337 Identities=16% Similarity=0.097 Sum_probs=212.0
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhC-CCCCCCCCcceeeecChh
Q 011057 53 DGNPRLNLASFV----TTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFN-APLEDSETAVGVGTVGSS 127 (494)
Q Consensus 53 ~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~ggt 127 (494)
+|+.|+.|.++. -.+.+|.+.+++.+-.+.-+.....+ ..+...++.++|+++.+ .+ .+.|+++|+
T Consensus 40 ~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~--~~~~~~~la~~L~~~s~~~d-------~vff~NSGa 110 (404)
T COG4992 40 QGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLF--YNEPQAELAEKLVELSPFAD-------RVFFCNSGA 110 (404)
T ss_pred CCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccccc--CChHHHHHHHHHHhhCcccc-------EEEEcCCcH
Confidence 455666555533 33567999999887666533322222 22333457778999886 43 499999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEe-CCCcchHHHHHHHHc-------CC-----eeEEEeccCCccccCHHH
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVT-GANVQVCWEKFARYF-------EV-----ELKEVKLSEGYYVMDPVK 194 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~-------G~-----~v~~v~~~~~~~~~d~~~ 194 (494)
|||-.|+..+|... + +..+.+||. ....|.-..-+.... +. .++.+| --|+++
T Consensus 111 EA~EaAiKlARk~~-------~-~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vp------fnDi~a 176 (404)
T COG4992 111 EANEAALKLARKYT-------G-DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVP------FNDIEA 176 (404)
T ss_pred HHHHHHHHHHHHHc-------C-CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecC------CCCHHH
Confidence 99999999997652 2 222346664 444553221111111 11 234444 248899
Q ss_pred HHHhhhhCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccCCCce
Q 011057 195 AVEMVDENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRLPLVK 269 (494)
Q Consensus 195 L~~~i~~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D 269 (494)
++++|+++|.+|++--..-..|.+-+ ++++.++|++| |++++.|++|.|.-- ...-+.+ .+++ ..|
T Consensus 177 l~~ai~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~------g~LLI~DEVQtG~GR--TGk~fA~e~~gV-~PD 247 (404)
T COG4992 177 LEAAIDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEH------GALLILDEVQTGLGR--TGKLFAYEHYGV-EPD 247 (404)
T ss_pred HHHHhccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHh------CeEEEEeccccCCCc--cchHHHHHHhCC-CCC
Confidence 99999999999988777667777733 78899999999 999999999976411 1111111 1122 367
Q ss_pred EEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHH
Q 011057 270 SINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHE 349 (494)
Q Consensus 270 ~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~ 349 (494)
++++ -|.++++..+|.+++++. .. .. . -.+... .|+.| ++....+..++++.+.+++ ..++..+
T Consensus 248 I~tl--aK~LgGG~PigA~la~~~-~~-~~--~----~~G~Hg-STfGG--NpLacAv~~a~l~~l~~e~---ll~~v~~ 311 (404)
T COG4992 248 ILTL--AKALGGGFPIGAMLATEE-IA-SA--F----TPGDHG-STFGG--NPLACAVALAVLEVLLEEG---LLENVRE 311 (404)
T ss_pred EEEe--eccccCCccceeeEEchh-hh-hc--C----CCCccc-CCCCc--CHHHHHHHHHHHHHHcchh---HHHHHHH
Confidence 7764 498888888999988632 11 11 0 111110 01111 1233344445566666654 5666778
Q ss_pred HHHHHHHHHhhCCC-eEEeecCC-CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCCh
Q 011057 350 NAMVLKEGLEKTGR-FNIVSKDE-GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSR 427 (494)
Q Consensus 350 ~a~~l~~~L~~~~~-~~~~~~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~ 427 (494)
...+|.++|+++.. +.++.+-. ..-++.+.+... ....++.+.|.++|+++.. .+..++|+.-.-.+++
T Consensus 312 ~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~--~~a~~~~~~~~~~gvL~~~-------a~~~ViR~~PpL~i~~ 382 (404)
T COG4992 312 KGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEP--YRARDIVRALREEGVLVLP-------AGPNVIRFLPPLVITE 382 (404)
T ss_pred HHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCc--ccHHHHHHHHHHCCeEEec-------CCCCeEEecCCccCCH
Confidence 88888888888642 33333322 334666777542 2468999999999988632 2445899998888999
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 011057 428 TLAERLVLDITKVLHELDS 446 (494)
Q Consensus 428 ~~id~~i~~l~~~~~~l~~ 446 (494)
++++..++.|+++++....
T Consensus 383 eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 383 EEIDEALDALERALAAASA 401 (404)
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 9999999999999886643
No 290
>PRK15029 arginine decarboxylase; Provisional
Probab=99.72 E-value=3.3e-15 Score=158.02 Aligned_cols=229 Identities=14% Similarity=0.058 Sum_probs=156.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCC
Q 011057 97 QNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEV 176 (494)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~ 176 (494)
..+..+..|++||.+. .-++++|+|.+|..++.++..+ ++.|+++..+|-|+..++.+.|+
T Consensus 207 I~eAq~~aA~~fgA~~------t~FlvNGST~gn~a~i~a~~~~-------------gd~Vlv~RN~HKSv~~al~L~ga 267 (755)
T PRK15029 207 FGESEKYAARVFGADR------SWSVVVGTSGSNRTIMQACMTD-------------NDVVVVDRNCHKSIEQGLILTGA 267 (755)
T ss_pred HHHHHHHHHHHhCCCc------EEEEeCChhHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHcCC
Confidence 3456677999999985 3567888889988776666432 36899999999999999999999
Q ss_pred eeEEEeccCCc----cccC-----HHHHHHhhhhCC--e--------EEEEeeCCCCcccccCHHHHHHHHHHhhcccCC
Q 011057 177 ELKEVKLSEGY----YVMD-----PVKAVEMVDENT--I--------CVAAILGSTLNGEFEDVKLLNDLLAEKNKETGW 237 (494)
Q Consensus 177 ~v~~v~~~~~~----~~~d-----~~~L~~~i~~~t--~--------~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~ 237 (494)
.+++++..-+. +.++ ++.++++|.+.+ + ++++++||+. |...++++|+++||++
T Consensus 268 ~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~-Gv~~di~~I~~~~h~~------ 340 (755)
T PRK15029 268 KPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYD-GVCYNAKEAQDLLEKT------ 340 (755)
T ss_pred eEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCc-ceeeCHHHHHHHHHhc------
Confidence 99998643211 2344 899999986532 3 7888888766 9999999999999999
Q ss_pred CceEEEecccccccccccCCccc--ccc-----cCCCce-EEEEcCcccCCcCCceEEEEEeCCC-Ccc-cccccccCCC
Q 011057 238 DTPIHVDAASGGFIAPFLYPELE--WDF-----RLPLVK-SINVSGHKYGLVYAGIGWVIWRNKE-DLP-EELIFHINYL 307 (494)
Q Consensus 238 ~~~l~vD~a~~~~~~~~~~~~~~--~~~-----~~~~~D-~~~~~~hK~l~~p~g~G~~~~~~~~-~~~-~~~~~~~~y~ 307 (494)
+++|+||+|||+.. .| .+.++ ..+ ...++| .++-|.||.+.+-...+++-+++.. .+. ..+.. ++
T Consensus 341 ~~~llvDEAhGah~-~F-~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~---~l 415 (755)
T PRK15029 341 SDRLHFDEAWYGYA-RF-NPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQ---AY 415 (755)
T ss_pred CCeEEEECcccccc-cc-CccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHH---HH
Confidence 99999999998743 22 22222 111 114788 8889999999887777888776541 111 11111 11
Q ss_pred CCCCCCcccccCcchHHH-HHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhhCCC
Q 011057 308 GADQPTFTLNFSKGSSQV-IAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEKTGR 363 (494)
Q Consensus 308 ~~~~~~~~~~~s~~~~~~-~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~~~~ 363 (494)
.. +..|.|...+ +++-.+.+.+.. .| ++..++..+.+..+++.|.++++
T Consensus 416 ~~------~qSTSPSY~LmASLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~~~ 466 (755)
T PRK15029 416 MM------HATTSPLYAICASNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_pred HH------HcCCCcHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhccc
Confidence 00 1123323333 333344445543 34 45677888888899999987764
No 291
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.72 E-value=1.2e-16 Score=141.70 Aligned_cols=165 Identities=20% Similarity=0.057 Sum_probs=127.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHH-HHHHHcCC
Q 011057 98 NRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWE-KFARYFEV 176 (494)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~-~~~~~~G~ 176 (494)
++++++++++++.+. ..+++++|+|+|+.+++.++... +.+|++++..|.+.. ..+...|+
T Consensus 3 ~~~~~~l~~~~~~~~-----~~~~~~~~~t~a~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~~~~~~~g~ 64 (170)
T cd01494 3 EELEEKLARLLQPGN-----DKAVFVPSGTGANEAALLALLGP-------------GDEVIVDANGHGSRYWVAAELAGA 64 (170)
T ss_pred HHHHHHHHHHcCCCC-----CcEEEeCCcHHHHHHHHHHhCCC-------------CCEEEEeecccceehhhHHHhcCC
Confidence 357788999996332 34889999999999888887431 257999999998777 78888999
Q ss_pred eeEEEeccCCc-cccCHHHHHHhh-hhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 177 ELKEVKLSEGY-YVMDPVKAVEMV-DENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 177 ~v~~v~~~~~~-~~~d~~~L~~~i-~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
+++.++.+++. ...+.+.+++.. .+++++++++++++++|...|+++|.++|+++ ++++|+|++|+.+..+.
T Consensus 65 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~------~~~li~D~a~~~~~~~~ 138 (170)
T cd01494 65 KPVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEY------GILLLVDAASAGGASPA 138 (170)
T ss_pred EEEEeccCCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHc------CCEEEEecccccccccc
Confidence 99999987542 122333554433 45788999999999999999999999999999 99999999999875432
Q ss_pred cCCcccccccCCCceEEEEcCcccCCcCCceEEEEEe
Q 011057 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWR 291 (494)
Q Consensus 255 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~ 291 (494)
.. .+....++|+++.++|||+++ .|+|++++|
T Consensus 139 ~~----~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 139 PG----VLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred cc----cccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 11 122335799999999999977 799999864
No 292
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.72 E-value=2.9e-15 Score=146.83 Aligned_cols=291 Identities=20% Similarity=0.150 Sum_probs=193.8
Q ss_pred ChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHH
Q 011057 90 YPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEK 169 (494)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (494)
.|....+|+. +++|-|.+. ++.+++|..|+..+++++... ++.|++++..+....+
T Consensus 62 nPT~~~lE~~----~a~LEg~~~-------~~afsSGmaAI~~~~l~ll~~-------------GD~vl~~~~~YG~t~~ 117 (396)
T COG0626 62 NPTRDALEEA----LAELEGGED-------AFAFSSGMAAISTALLALLKA-------------GDHVLLPDDLYGGTYR 117 (396)
T ss_pred CccHHHHHHH----HHHhhCCCc-------EEEecCcHHHHHHHHHHhcCC-------------CCEEEecCCccchHHH
Confidence 4555565544 888888864 888999999999887777441 3688888877654333
Q ss_pred ----HHHHcCCeeEEEeccCCccccCHHHHHHhhh-hCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 011057 170 ----FARYFEVELKEVKLSEGYYVMDPVKAVEMVD-ENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVD 244 (494)
Q Consensus 170 ----~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~-~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (494)
..+..|+++..++. .+.+++++++. ++|++|.+-.|+||+..+.||++|+++||++ ++.++||
T Consensus 118 ~~~~~l~~~gi~~~~~d~------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~------g~~vvVD 185 (396)
T COG0626 118 LFEKILQKFGVEVTFVDP------GDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAY------GALVVVD 185 (396)
T ss_pred HHHHHHHhcCeEEEEECC------CChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhc------CCEEEEE
Confidence 44556888887762 34466677776 5899999999999999999999999999999 9999999
Q ss_pred cccccccccccCCcccccccCCCceEEEEcCcccCCcCCce-EEEEEeCCCCcccccc-cccCCCCCCCCCcccccCcch
Q 011057 245 AASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGI-GWVIWRNKEDLPEELI-FHINYLGADQPTFTLNFSKGS 322 (494)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~-G~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~~~s~~~ 322 (494)
.+++.++ +...+. .|+|++.-|..|++.+...+ |.+++.+.+.+.+.+. ....+++..
T Consensus 186 NTfatP~---~q~PL~-----~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~------------ 245 (396)
T COG0626 186 NTFATPV---LQRPLE-----LGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAV------------ 245 (396)
T ss_pred CCccccc---ccChhh-----cCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCC------------
Confidence 9998854 222222 27999999999999887665 3334433323322211 111112111
Q ss_pred HHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCCCCC
Q 011057 323 SQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDNKRH 386 (494)
Q Consensus 323 ~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~ 386 (494)
....-.|..++ |...+..++++..+++..+.+.|++.|.++ ++.|. ...++++|.+.+. .
T Consensus 246 l~p~dA~l~lR--GlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~--~ 321 (396)
T COG0626 246 LSPFDAWLLLR--GLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE--E 321 (396)
T ss_pred CCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh--H
Confidence 11222344443 445567889999999999999999999877 44442 1457999999652 2
Q ss_pred CHHHHHHHHHhcCceee------ccccCCC--------------CCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 387 DEFEVAELLRRFGWIVP------AYTMPAD--------------AQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 387 ~~~~l~~~L~~~Gi~v~------~~~~~~~--------------~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
...++.+.|.--.+..+ ....|.. .-....+|+|++. |+++.+++||+++++.+
T Consensus 322 ~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl----Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 322 AAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL----EDVEDLIADLEQALAKA 395 (396)
T ss_pred HHHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHHhh
Confidence 34445555442221110 0111110 0124689999985 88899999999998765
No 293
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.72 E-value=3.8e-15 Score=141.19 Aligned_cols=296 Identities=14% Similarity=0.079 Sum_probs=197.2
Q ss_pred CCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchH
Q 011057 87 MDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVC 166 (494)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s 166 (494)
+..|.|...+.+++.+.+.+.-|-+..+. ....++++|+|.||.+.+-.+.+. ++..++|.+.++.
T Consensus 117 fqdy~Gl~~frqa~A~Fm~~~r~~~v~fd-P~~~Vv~~G~T~ane~l~fcLadp-------------gdafLvPtPyY~g 182 (471)
T KOG0256|consen 117 FQDYHGLPSFRQAVAEFMERARGNRVKFD-PERVVVTNGATSANETLMFCLADP-------------GDAFLVPTPYYPG 182 (471)
T ss_pred cccccCchHHHHHHHHHHHHHhCCCCccC-ccceEEecccchhhHHHHHHhcCC-------------CceeeecCCCCCc
Confidence 34456888888888888888877766543 234889999999998777666431 2578999999998
Q ss_pred HHHHHHH-cCCeeEEEecc-CCccccCHHHHHHhhhh------CCeEEEEeeCCCCcccccC---HHHHHHHHHHhhccc
Q 011057 167 WEKFARY-FEVELKEVKLS-EGYYVMDPVKAVEMVDE------NTICVAAILGSTLNGEFED---VKLLNDLLAEKNKET 235 (494)
Q Consensus 167 ~~~~~~~-~G~~v~~v~~~-~~~~~~d~~~L~~~i~~------~t~~vv~~~~~~~tG~~~~---l~~I~~la~~~~~~~ 235 (494)
+.+-+++ .|++++.|.++ .++++++.++||+++.+ +.+.|++++|+||-|++.+ +..+..+|.++
T Consensus 183 fdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k---- 258 (471)
T KOG0256|consen 183 FDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK---- 258 (471)
T ss_pred ccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc----
Confidence 8775554 58899999887 46689999999998864 3578999999999999965 45566677888
Q ss_pred CCCceEEEecccccccccccCCccc------ccc--cCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCC
Q 011057 236 GWDTPIHVDAASGGFIAPFLYPELE------WDF--RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYL 307 (494)
Q Consensus 236 ~~~~~l~vD~a~~~~~~~~~~~~~~------~~~--~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~ 307 (494)
++.+++|+.|++.+. ..++.. .+. ....+.++-.-++-+++++.+.|+++..++...... ... .++
T Consensus 259 --niHvI~DEIya~sVF--~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA-~km-ssf 332 (471)
T KOG0256|consen 259 --NIHVISDEIYAGSVF--DKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAA-TKM-SSF 332 (471)
T ss_pred --ceEEEeehhhccccc--CccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHH-HHH-hhc
Confidence 999999999988653 222221 111 233455555555568888889999998776433211 111 111
Q ss_pred CCCCCCcccccCcchHHHHHHHHHH-----HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEe--
Q 011057 308 GADQPTFTLNFSKGSSQVIAQYYQL-----IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSL-- 380 (494)
Q Consensus 308 ~~~~~~~~~~~s~~~~~~~a~~~al-----~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~-- 380 (494)
+. .+..-++... ..+-++.+++..+++...-+|+.++|++++ +..+.. +.++++|.-
T Consensus 333 ~~-------------vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~lg-I~cl~s--~AGlF~wvDlr 396 (471)
T KOG0256|consen 333 GL-------------VSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKALG-IPCLKS--NAGLFCWVDLR 396 (471)
T ss_pred cC-------------CcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhcC-Cceeec--CCeeEEEEEhH
Confidence 11 1111122222 333345556777777788889999999997 887765 567877642
Q ss_pred ---cCCCCCCHHHHHHHHHhc-CceeeccccCCCCCCceEEEEEecc
Q 011057 381 ---KDNKRHDEFEVAELLRRF-GWIVPAYTMPADAQHITVLRVVIRE 423 (494)
Q Consensus 381 ---~~~~~~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRvs~~~ 423 (494)
+...-....++.+++.++ ++.++.....- -...+++|+++..
T Consensus 397 ~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~-C~EpGWFRvcFAn 442 (471)
T KOG0256|consen 397 KLLTSLTFEGELELWERILDNVKLNLSPGSSCH-CHEPGWFRVCFAN 442 (471)
T ss_pred HhcCcCChHHHHHHHHHHHHhhccccCCCCcce-ecCCCeEEEEecc
Confidence 111111234677888777 77664332211 1234689999974
No 294
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.72 E-value=8.5e-15 Score=145.59 Aligned_cols=335 Identities=14% Similarity=0.097 Sum_probs=199.4
Q ss_pred HHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcC
Q 011057 70 PECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEG 149 (494)
Q Consensus 70 p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g 149 (494)
+.+.++..+++...-..|..+|.+.++|++ +++++|.+. ++.|++||.|+.++....
T Consensus 57 ~aMs~~q~a~~~vGDd~Yagd~s~~~LE~~----vAe~lG~e~-------aV~v~sGTaAl~ll~~l~------------ 113 (460)
T PRK13237 57 NAMSDRQWAGMMIGDEAYAGSRNFYHLEET----VQEYYGFKH-------VVPTHQGRGAENLLSRIA------------ 113 (460)
T ss_pred hhccHHHHHHHhhcchhhcCCCcHHHHHHH----HHHHHCCCe-------EEEeCCHHHHHHHHHHhC------------
Confidence 444444333333222346778888888877 888999975 899999999998743221
Q ss_pred CCCCCCeEEeCCCcchHHHHH-HHHcCCeeEEEec---------cCCccccCHHHHHHhhhhC----CeEEEEeeCCCCc
Q 011057 150 KPFDKPNIVTGANVQVCWEKF-ARYFEVELKEVKL---------SEGYYVMDPVKAVEMVDEN----TICVAAILGSTLN 215 (494)
Q Consensus 150 ~~~~~~~vi~~~~~h~s~~~~-~~~~G~~v~~v~~---------~~~~~~~d~~~L~~~i~~~----t~~vv~~~~~~~t 215 (494)
.+. +++ + +...|++...+ ....|+...-+.. ++.++.+|+++|+++|+++ +.+|.++..+|..
T Consensus 114 v~p-Gd~-V-p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~ 190 (460)
T PRK13237 114 IKP-GQY-V-PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLA 190 (460)
T ss_pred CCC-cCE-E-CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccC
Confidence 111 133 3 77777766655 6777775443321 1345899999999999864 3356666777776
Q ss_pred -ccc---cCHHHHHHHHHHhhcccCCCceEEEecccccccccccC---Cccc-cccc------CCCceEEEEcCcccCCc
Q 011057 216 -GEF---EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLY---PELE-WDFR------LPLVKSINVSGHKYGLV 281 (494)
Q Consensus 216 -G~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~---~~~~-~~~~------~~~~D~~~~~~hK~l~~ 281 (494)
|.. .++++|.++|+++ |+.||.|+|+..+..-|.. +.+. .... ...+|.+++|+||.+.+
T Consensus 191 GGqpvs~~~m~~I~elA~~~------Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~ 264 (460)
T PRK13237 191 GGQPVSMANMRAVRELCDKH------GIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLV 264 (460)
T ss_pred CCeeCCHHhHHHHHHHHHHc------CCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCC
Confidence 444 5789999999999 9999999999765321221 1111 0100 23689999999999988
Q ss_pred CCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhC
Q 011057 282 YAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKT 361 (494)
Q Consensus 282 p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~ 361 (494)
+.| |++++++++...........|-+.. + .+..++..+.++..+|...-.+ .+.++..+..+||.++|.+.
T Consensus 265 ~~G-G~i~t~D~eL~~~~r~~~~~~eG~~--t---ygg~~grd~~alAvgl~E~~~~---~y~~~ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 265 NIG-GFLAMNDEELFDEAKELVVVYEGMP--S---YGGMAGRDMEAMAIGIEESVQY---EYIEHRVGQVRYLGEKLLAA 335 (460)
T ss_pred CCc-eEEEECCHHHHHHHHHhccccCCCc--C---CCChhhhHHHHHHhHHHhhchH---HHHHHHHHHHHHHHHHHHHC
Confidence 764 7777777654433222222222211 0 1121122344444445433222 56667778899999999998
Q ss_pred CCeEEeecCCCccEEEEEec------CCCCCCHHHHHHHHHh-cCcee---ecc---ccCCCC----CCceEEEEEe-cc
Q 011057 362 GRFNIVSKDEGVPLVAFSLK------DNKRHDEFEVAELLRR-FGWIV---PAY---TMPADA----QHITVLRVVI-RE 423 (494)
Q Consensus 362 ~~~~~~~~~~~~~~v~f~~~------~~~~~~~~~l~~~L~~-~Gi~v---~~~---~~~~~~----~~~~~lRvs~-~~ 423 (494)
| +.++.+. ...-+.+... +........++..|.. .||-. .++ .-|.+. .....+|+++ +.
T Consensus 336 G-vpv~~p~-ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr 413 (460)
T PRK13237 336 G-VPIVEPV-GGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRR 413 (460)
T ss_pred C-CceecCC-CceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccc
Confidence 7 8888764 2332323211 1234556677777653 34321 111 111111 1136789888 34
Q ss_pred CCChHHHHHHHHHHHHHHHHHhcC
Q 011057 424 DFSRTLAERLVLDITKVLHELDSL 447 (494)
Q Consensus 424 ~~t~~~id~~i~~l~~~~~~l~~~ 447 (494)
-.|.+.+|...+.|..+.++-..+
T Consensus 414 ~yt~~h~~~v~~~~~~~~~~~~~~ 437 (460)
T PRK13237 414 VYTYAHMDVVADSVIKLYKHREDI 437 (460)
T ss_pred cccHHHHHHHHHHHHHHHHhHhhc
Confidence 567777777777776666655544
No 295
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.72 E-value=1.6e-14 Score=145.26 Aligned_cols=314 Identities=15% Similarity=0.070 Sum_probs=186.3
Q ss_pred ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA 147 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~ 147 (494)
++|.+.+++.+.+....... +....+++.+ +++.++...+ ..+.++++|++|+..++..++..
T Consensus 45 ~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~----la~~l~~~~~----~~~~~~~SGseA~~~Al~~ar~~------- 107 (375)
T PRK04260 45 FHPQVQQALQKQAGLIWHSP--NLYLNSLQEE----VAQKLIGDKD----YLAFFCNSGAEANEAAIKIARKA------- 107 (375)
T ss_pred CCHHHHHHHHHHHHhcCccc--CccCCHHHHH----HHHHHhcCcC----CEEEEcCccHHHHHHHHHHHHHh-------
Confidence 37889999988887643322 1222334444 5544322221 23689999999999999988643
Q ss_pred cCCCCCCCeEE-eCCCcchHHHHHHHHcCCeeE---------EEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCccc
Q 011057 148 EGKPFDKPNIV-TGANVQVCWEKFARYFEVELK---------EVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGE 217 (494)
Q Consensus 148 ~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~~v~---------~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~ 217 (494)
.| +.+|+ .....|.+...++...|.+.. .++.. -..|++++++.+.+++.+|++..+++++|.
T Consensus 108 ~~----~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~dl~~l~~~l~~~~a~vi~e~v~~~~G~ 180 (375)
T PRK04260 108 TG----KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA---IFNDLNSVKALVNKNTAAVMLELVQGESGV 180 (375)
T ss_pred cC----CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe---CCCCHHHHHHhcCCCeEEEEECCeECCCCC
Confidence 11 23455 456778776666554443211 11110 124899999988777788888888889898
Q ss_pred ccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccCCCceEEEEcCcccCCcCCceEEEEEeC
Q 011057 218 FED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVIWRN 292 (494)
Q Consensus 218 ~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~ 292 (494)
+.+ +++|.++|+++ ++++++|++|.++. . ....... ..++ ..|.+ ++.|.+.++..+|+++.++
T Consensus 181 ~~~~~~~l~~~~~l~~~~------~~~~i~De~~~g~g-~-~g~~~~~~~~~~-~pdi~--t~sK~l~~G~~ig~~~~~~ 249 (375)
T PRK04260 181 LPADKDFVKALADYCQET------GILLIVDEVQTGMG-R-TGKLYAFEHYGI-EPDIF--TLAKGLANGVPVGAMLAKS 249 (375)
T ss_pred cCCCHHHHHHHHHHHHHc------CCEEEEechhhCCC-c-ccchhhhHhhCC-CCCEE--EecccccCCcceEEEEEcH
Confidence 854 89999999999 99999999997532 1 1111111 1111 34655 4569887666789988764
Q ss_pred CCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHH-HHHHHHHHHHHHHHHHHHhhCCCeEEeecCC
Q 011057 293 KEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGY-RNVMENCHENAMVLKEGLEKTGRFNIVSKDE 371 (494)
Q Consensus 293 ~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~-~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~ 371 (494)
+ .. ..+. .. ....+ ++.+.....+..++++.+..+++ ++..+....+++.+.+.+.+.+.+..+..
T Consensus 250 ~-~~-~~~~------~~-~~~~t--~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 316 (375)
T PRK04260 250 S-LG-GAFG------YG-SHGST--FGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRG-- 316 (375)
T ss_pred H-HH-hhcC------CC-CCCCC--CCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec--
Confidence 3 11 1111 00 00111 12223344445555655544332 22233333344444444444432222221
Q ss_pred CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 372 GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 372 ~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
...++.+.+.. +...+.++|.++|+.+.. .+...+|++.+..++.++++++++.|+++
T Consensus 317 ~g~~~~~~~~~----~~~~~~~~l~~~Gi~v~~-------~~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 317 LGYMIGIETTA----DLSQLVEAARDKGLIVLT-------AGTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred cceEEEEEecC----cHHHHHHHHHhCCCEEec-------CCCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 34556666522 467899999999998632 13367999998899999999888888765
No 296
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=2.2e-14 Score=146.29 Aligned_cols=353 Identities=13% Similarity=0.026 Sum_probs=203.5
Q ss_pred hcCCCCCccccc----ccCCChHHHHHHHHHHhcccCC-CCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecCh
Q 011057 52 LDGNPRLNLASF----VTTWMEPECDKLMMAAINKNYV-DMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGS 126 (494)
Q Consensus 52 ~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~gg 126 (494)
.+|+.++.+.++ .-.+.+|.+.+++.+.++.... .+..+ ..+.+.++.+.|++++.... ..+.|+++|
T Consensus 39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~--~~~~~~~la~~l~~~~p~~~-----~~v~f~~sG 111 (423)
T PRK05964 39 ADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGF--THEPAERLAQRLVALTPGGL-----DHVFFSDSG 111 (423)
T ss_pred CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCcccccc--CCHHHHHHHHHHHHhCCCCC-----CEEEEeCCc
Confidence 356666554443 2335578999999888875322 11111 23344457778888764211 248999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCCc-cccCH
Q 011057 127 SEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEGY-YVMDP 192 (494)
Q Consensus 127 t~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~~-~~~d~ 192 (494)
+||+..|++.++..+..+ |. ..+.+|+ .....|....-+....+- .+..++...++ ...++
T Consensus 112 seA~e~A~klar~~~~~~----~~-~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 186 (423)
T PRK05964 112 SVAVEVALKMALQYWRNR----GE-PGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATL 186 (423)
T ss_pred HHHHHHHHHHHHHHHHhc----CC-CCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHH
Confidence 999999999997643221 11 1124555 455566543333322221 23344432210 11237
Q ss_pred HHHHHhhhh---CCeEEEEeeC--CCCccccc----CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccc-
Q 011057 193 VKAVEMVDE---NTICVAAILG--STLNGEFE----DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWD- 262 (494)
Q Consensus 193 ~~L~~~i~~---~t~~vv~~~~--~~~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~- 262 (494)
+++++.+.+ +..+|+ +.| ....|... .+++|.++|++| |+++++|++|.++.. ........
T Consensus 187 ~~l~~~l~~~~~~iaavi-~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tg~gr--~G~~~a~~~ 257 (423)
T PRK05964 187 DALEALLEKHAGEIAAFI-VEPLVQGAGGMLFYDPRYLAELRRICDRH------GVLLIFDEIATGFGR--TGTLFACEQ 257 (423)
T ss_pred HHHHHHHHhCCCcEEEEE-EecccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--CcchhHHHh
Confidence 888888853 233444 444 34456553 389999999999 999999999965421 11100111
Q ss_pred ccCCCceEEEEcCcccCCcC-CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHH
Q 011057 263 FRLPLVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYR 341 (494)
Q Consensus 263 ~~~~~~D~~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~ 341 (494)
+++ ..|.++++ |++.++ ..+|+++.+++ .. +.+...... .......+ +..++....+..++++.+..+
T Consensus 258 ~~v-~pDi~~~~--K~l~gG~~p~~av~~~~~-i~-~~~~~~~~~-~~~~~~~T--~~~np~~~aaa~a~l~~l~~~--- 326 (423)
T PRK05964 258 AGV-SPDIMCLS--KGLTGGYLPLAATLCTAE-IF-EAFYSDDRA-KAFMHSPS--YTANPLACAAANASLDLFEDE--- 326 (423)
T ss_pred cCC-CCCeeeee--hhhhcCcccceEEEEcHH-HH-HhhhcCCcc-cccccCCC--CCcCHHHHHHHHHHHHHHHhc---
Confidence 122 46776654 988666 56787766432 22 211100000 00000011 122334555566667666544
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEeec-CCCccEEEEEecCCCC-CCHHHHHHHHHhcCceeeccccCCCCCCceEEEE
Q 011057 342 NVMENCHENAMVLKEGLEKTGRFNIVSK-DEGVPLVAFSLKDNKR-HDEFEVAELLRRFGWIVPAYTMPADAQHITVLRV 419 (494)
Q Consensus 342 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~~v~f~~~~~~~-~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRv 419 (494)
...++..++.+++++.|+++..+..+.+ .....++.+.+..... .....+.+.|.++|+++... ...+|+
T Consensus 327 ~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~--------~~~lR~ 398 (423)
T PRK05964 327 PVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPL--------GNTIYL 398 (423)
T ss_pred CHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEec--------CCEEEE
Confidence 3567788888889888887643332222 1134566777743210 12567889999999986431 136999
Q ss_pred EeccCCChHHHHHHHHHHHHHHHHH
Q 011057 420 VIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 420 s~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
+....+|++|||++++.|+++++++
T Consensus 399 ~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 399 MPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred eCCcccCHHHHHHHHHHHHHHHhhC
Confidence 9988999999999999999998763
No 297
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.70 E-value=3.8e-14 Score=143.23 Aligned_cols=351 Identities=13% Similarity=0.034 Sum_probs=206.7
Q ss_pred hcCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++ .-.+.+|.+.+++.+.++.-..... ....+...++.++|.++.+.. ..+.++++|+
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~la~~L~~~~~~~------~~v~f~~sGs 108 (408)
T PRK04612 37 DQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSN--VFYSAPPLKLAEELVTASRFA------EKVFLCNSGT 108 (408)
T ss_pred CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccc--ccCCHHHHHHHHHHHhhCCCC------CEEEEcCchH
Confidence 356666554443 2345678898988888765322111 112233445677777765321 2489999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCCeeEE---EeccCCc---cccCHHHHHHhhh
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEVELKE---VKLSEGY---YVMDPVKAVEMVD 200 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~~v~~---v~~~~~~---~~~d~~~L~~~i~ 200 (494)
||+..|++.++..+.. .|.+..+.+|+ .....|....-+....|-.... -+..++. -..|++.+++++.
T Consensus 109 eA~e~AlklAr~~~~~----~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~ 184 (408)
T PRK04612 109 EANEAAIKLVRKWASS----QGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMA 184 (408)
T ss_pred HHHHHHHHHHHHHHHh----hCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhC
Confidence 9999999999865321 12211234454 4555676544444333321100 0111100 0137889998887
Q ss_pred hCCeEEEEeeCCCCcccccC-----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcC
Q 011057 201 ENTICVAAILGSTLNGEFED-----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSG 275 (494)
Q Consensus 201 ~~t~~vv~~~~~~~tG~~~~-----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 275 (494)
.++.+.++..|...+|.+.+ +++|.++|+++ ++++++|++|.++.. ..............|..++
T Consensus 185 ~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~------g~llI~DEv~tg~gr--~G~~~a~~~~~~~pdi~t~-- 254 (408)
T PRK04612 185 GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQH------DALLVLDEIQCGMGR--TGTLFAHWQEQVTPDIVTL-- 254 (408)
T ss_pred CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CCchhhhhhcCCCCCEEEE--
Confidence 66677777778777765522 88999999999 999999999976421 1110110000113465554
Q ss_pred cccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHH
Q 011057 276 HKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLK 355 (494)
Q Consensus 276 hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~ 355 (494)
.|.+.++..+|+++.+++ .. +.+. ......++ +.++....+..++|+.+.++ +..++..++.++|.
T Consensus 255 ~K~l~~G~piga~~~~~~-~~-~~~~-------~~~~~~t~--~~~p~~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~ 320 (408)
T PRK04612 255 AKALGGGFPIGAMLAGPK-VA-ETMQ-------FGAHGTTF--GGNPLAAAVARVALRKLASP---QIAANVARQSAALR 320 (408)
T ss_pred cchhcCCCceEEEEECHH-HH-hhhc-------CCCcCCCC--CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHH
Confidence 588877677898876642 21 1111 00111122 22234455566666666543 46777788888888
Q ss_pred HHHhhCCC-eEEeecCC-CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHH
Q 011057 356 EGLEKTGR-FNIVSKDE-GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERL 433 (494)
Q Consensus 356 ~~L~~~~~-~~~~~~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~ 433 (494)
++|+++.. +.++.... ...++.+.+.....-....+.+.|.++|+++.. .+...+|++....++.++++.+
T Consensus 321 ~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~-------~g~~~lRl~Ppl~it~eeid~~ 393 (408)
T PRK04612 321 AGLEALNAEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQ-------AGPDVLRFVPALNLTDAELADG 393 (408)
T ss_pred HHHHHHHhhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEee-------CCCCEEEEcCCccCCHHHHHHH
Confidence 88877531 22222211 334566666321111256788999999998632 2336799998889999999999
Q ss_pred HHHHHHHHHHHh
Q 011057 434 VLDITKVLHELD 445 (494)
Q Consensus 434 i~~l~~~~~~l~ 445 (494)
++.|++++..+.
T Consensus 394 l~~l~~~l~~~~ 405 (408)
T PRK04612 394 LARLRLALADYV 405 (408)
T ss_pred HHHHHHHHHHHh
Confidence 999999887643
No 298
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.69 E-value=2.7e-14 Score=147.38 Aligned_cols=357 Identities=14% Similarity=0.042 Sum_probs=203.9
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++.............+.+.++.+.|.+++.-.. ...+.|+++|+|
T Consensus 87 dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~----~~~v~f~~SGsE 162 (504)
T PLN02760 87 NGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARK----MGKVFFTNSGSE 162 (504)
T ss_pred CCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCC----CCEEEEeCChHH
Confidence 56666654442 2335678999999888876432211111234445566777777753211 124889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCe-EEeCCCcchHHHHHHHHcCCe------------eEEEeccCCccc------
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPN-IVTGANVQVCWEKFARYFEVE------------LKEVKLSEGYYV------ 189 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~-vi~~~~~h~s~~~~~~~~G~~------------v~~v~~~~~~~~------ 189 (494)
|+..+++.++..+.. .|.. .+.+ |......|.+...++...|.. +..++... .+.
T Consensus 163 A~e~AlKlAr~~~~~----~g~~-~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~ 236 (504)
T PLN02760 163 ANDTQVKLVWYYNNA----LGRP-NKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPH-YWRFHLPGE 236 (504)
T ss_pred HHHHHHHHHHHHHHh----cCCC-CCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCc-ccccCCCCC
Confidence 999999999754311 1211 1234 445667888765555544432 12222211 000
Q ss_pred -------cCHHHHHHhhhh---C-CeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccc-ccc
Q 011057 190 -------MDPVKAVEMVDE---N-TICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGF-IAP 253 (494)
Q Consensus 190 -------~d~~~L~~~i~~---~-t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~-~~~ 253 (494)
...++|++.+.. + ..+|++--.....|.+.| +++|.++|++| |+++|+|+++.++ -..
T Consensus 237 ~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~------g~lLI~DEV~TGfGRtG 310 (504)
T PLN02760 237 TEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKY------DILFIADEVICAFGRLG 310 (504)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEecchhhCCcccc
Confidence 112456666642 2 344444333345588877 99999999999 9999999999543 221
Q ss_pred ccCCcccc-cccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 254 FLYPELEW-DFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 254 ~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
..... .+++ ..|.+++ -|.+.++. .+|.++++++ .. +.+.......+......++ +.++....+..++
T Consensus 311 ---~~~a~e~~gv-~PDivtl--gK~lggG~~PigAv~~~~~-i~-d~~~~~~~~~~~~~h~~T~--~gnPl~~Aaala~ 380 (504)
T PLN02760 311 ---TMFGCDKYNI-KPDLVSL--AKALSSAYMPIGAVLVSPE-IS-DVIHSQSNKLGSFAHGFTY--SGHPVSCAVALEA 380 (504)
T ss_pred ---hhhHHHhcCC-CCcEEEe--cccccCCccccceEeecHH-HH-hhhhcccccccCcccCCCC--CCCHHHHHHHHHH
Confidence 11111 1223 3787664 48775542 4666666542 22 2211110000000111222 2234555666677
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-CccEEEEEecCCCC----C--C---HHHHHHHHHhcCce
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GVPLVAFSLKDNKR----H--D---EFEVAELLRRFGWI 401 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~----~--~---~~~l~~~L~~~Gi~ 401 (494)
|+.+.++ +..++..++.++|++.|+++....++..-. ...++.+.+..... . + ...+.+.+.++|++
T Consensus 381 Le~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl 457 (504)
T PLN02760 381 LKIYKER---NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGML 457 (504)
T ss_pred HHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcE
Confidence 7777554 457788888888888887763232222211 23456666633211 0 0 34577889999998
Q ss_pred eeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 402 VPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 402 v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
+.. .+ ..+|++....+|++|||++++.++++++.+.+
T Consensus 458 ~~~-------~g-~~lrl~Ppl~it~eeid~~~~~l~~al~~~~~ 494 (504)
T PLN02760 458 VRV-------AG-DNIMMSPPLIITPEEVDELISIYGKALKATEE 494 (504)
T ss_pred EEe-------cC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 633 12 35888877779999999999999999988753
No 299
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.68 E-value=7.7e-14 Score=142.64 Aligned_cols=351 Identities=14% Similarity=0.055 Sum_probs=207.0
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++........ ...+...++.+.|++++..+. ..+.|+++|+|
T Consensus 80 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~--~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGsE 152 (459)
T PRK11522 80 QGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQE--LLDPLRAMLAKTLAALTPGKL-----KYSFFCNSGTE 152 (459)
T ss_pred CCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccc--cCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCchH
Confidence 34544444333 22345788999998887753221111 223444556777888764321 24889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEe-CCCcchHHHHHHHHcCCeeEE---EeccCCcc---ccCHHHHHHhhhh
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIVT-GANVQVCWEKFARYFEVELKE---VKLSEGYY---VMDPVKAVEMVDE 201 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~~v~~---v~~~~~~~---~~d~~~L~~~i~~ 201 (494)
|+..|++.++.....+ | +..|+. ....|....-+....|-.... .|..++-. .-|.+++++.++.
T Consensus 153 Ave~AlklAr~~t~~~----g----r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 224 (459)
T PRK11522 153 SVEAALKLAKAYQSPR----G----KFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSE 224 (459)
T ss_pred HHHHHHHHHHHHhccC----C----CcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHH
Confidence 9999999997642100 1 234554 445676544444333321111 11111000 1267788887752
Q ss_pred ------CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccCCCceE
Q 011057 202 ------NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRLPLVKS 270 (494)
Q Consensus 202 ------~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D~ 270 (494)
+..+|++--.....|.+.| ++++.++|++| |+++++|+++.++- . ....... .+++ ..|.
T Consensus 225 ~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~------g~llI~DEV~tG~G-R-tG~~~a~e~~gv-~PDi 295 (459)
T PRK11522 225 CKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEF------GALLILDEVQTGMG-R-TGKMFACEHENV-QPDI 295 (459)
T ss_pred hhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHc------CCEEEeccceecCC-c-cchhhhhhccCC-CCCE
Confidence 2345555555556688877 99999999999 99999999996531 0 1110011 1222 3677
Q ss_pred EEEcCcccCCcC-CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHH
Q 011057 271 INVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHE 349 (494)
Q Consensus 271 ~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~ 349 (494)
+++ -|.+.++ ..+|.++++++ .. ..+... .+.. ..+ +..++....+..++|+.+.++ ...++..+
T Consensus 296 vt~--gK~lggG~~Pigav~~~~~-i~-~~~~~~-~~~~----~~T--~~gnp~~~Aaala~L~~i~~~---~l~~~~~~ 361 (459)
T PRK11522 296 LCL--AKALGGGVMPIGATIATEE-VF-SVLFDN-PFLH----TTT--FGGNPLACAAALATINVLLEQ---NLPAQAEQ 361 (459)
T ss_pred EEe--chhhhCCCccceeEEEcHH-HH-HHhccC-Cccc----CCC--CCCCHHHHHHHHHHHHHHhcc---hHHHHHHH
Confidence 654 4877654 35777777643 22 111100 1110 111 122335556667777777655 35677888
Q ss_pred HHHHHHHHHhhCC-CeE-EeecC-CCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCC
Q 011057 350 NAMVLKEGLEKTG-RFN-IVSKD-EGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFS 426 (494)
Q Consensus 350 ~a~~l~~~L~~~~-~~~-~~~~~-~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t 426 (494)
+.++|+++|+++. .+. ++..- ....++.+.+... .....+.+.|.++|+++... ..+..++|++....+|
T Consensus 362 ~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~--~~~~~i~~~l~~~Gvl~~~~-----~~~~~~lr~~Ppl~~t 434 (459)
T PRK11522 362 KGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN--EIGYNFASEMFRQRVLVAGT-----LNNAKTIRIEPPLTLT 434 (459)
T ss_pred HHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc--hHHHHHHHHHHHCCeEEEec-----CCCCCEEEEECCccCC
Confidence 8889998888763 122 22111 1345677777432 12467889999999987431 1234689999998999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCc
Q 011057 427 RTLAERLVLDITKVLHELDSLP 448 (494)
Q Consensus 427 ~~~id~~i~~l~~~~~~l~~~~ 448 (494)
++++|++++.|+++++++.+..
T Consensus 435 ~~~id~~l~~l~~~l~~~~~~~ 456 (459)
T PRK11522 435 IEQCEQVLKAARKALAAMRVSV 456 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998887654
No 300
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.66 E-value=3.4e-14 Score=148.90 Aligned_cols=306 Identities=12% Similarity=0.024 Sum_probs=191.6
Q ss_pred HHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHH-HHHcCC
Q 011057 98 NRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKF-ARYFEV 176 (494)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~-~~~~G~ 176 (494)
.+..+..|++||.+. .-.+++|+|.+|..++.++..+ ++.|+++..+|-|+..+ +.+.|+
T Consensus 177 ~eAq~~AA~~fgAd~------tyFlvNGTS~gn~a~i~a~~~~-------------Gd~VLvdRN~HKSv~hgaLiLsGa 237 (720)
T PRK13578 177 KDAQKHAAKVFNADK------TYFVLNGTSASNKVVTNALLTP-------------GDLVLFDRNNHKSNHHGALIQAGA 237 (720)
T ss_pred HHHHHHHHHHhCCCc------eEEEeCChhHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHHcCC
Confidence 346677999999985 3567888899988777776432 36899999999999985 889999
Q ss_pred eeEEEeccCCc----cccCH-----HHHHHhhhhC----------CeEEEEeeCCCCcccccCHHHHHHH-HHHhhcccC
Q 011057 177 ELKEVKLSEGY----YVMDP-----VKAVEMVDEN----------TICVAAILGSTLNGEFEDVKLLNDL-LAEKNKETG 236 (494)
Q Consensus 177 ~v~~v~~~~~~----~~~d~-----~~L~~~i~~~----------t~~vv~~~~~~~tG~~~~l~~I~~l-a~~~~~~~~ 236 (494)
.++++...-+. +.++. +.++++|.+. .++++++++|+. |.+-++++|.++ ++.+
T Consensus 238 ~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYd-G~~ydi~~I~~~~~h~~----- 311 (720)
T PRK13578 238 TPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYD-GTIYNARQVVDKIGHLC----- 311 (720)
T ss_pred eEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCc-ceeecHHHHHHHhhccC-----
Confidence 99998654211 23454 4488888764 367888888765 999999999998 6777
Q ss_pred CCceEEEecccccccccccCCc---ccccccCCCce----EEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCC
Q 011057 237 WDTPIHVDAASGGFIAPFLYPE---LEWDFRLPLVK----SINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGA 309 (494)
Q Consensus 237 ~~~~l~vD~a~~~~~~~~~~~~---~~~~~~~~~~D----~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~ 309 (494)
+ ++|||+|||+.. .| .+. .....-..++| +++-|.||.+.+-...+++-+++.. +.. +..|...
T Consensus 312 -~-~llvDEAhgah~-~F-~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~-i~g----~~~~v~~ 382 (720)
T PRK13578 312 -D-YILFDSAWVGYE-QF-IPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNH-IKG----QARYCPH 382 (720)
T ss_pred -C-cEEEeCcchhhh-cc-CcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcc-ccc----ccccCCH
Confidence 7 999999998753 22 221 11010123678 9999999999877777777765532 110 0011110
Q ss_pred CC--CCc-ccccCcchHHHH-HHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHH-hhCCCeEEeecCC------------
Q 011057 310 DQ--PTF-TLNFSKGSSQVI-AQYYQLIRLGF-EGYRNVMENCHENAMVLKEGL-EKTGRFNIVSKDE------------ 371 (494)
Q Consensus 310 ~~--~~~-~~~~s~~~~~~~-a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L-~~~~~~~~~~~~~------------ 371 (494)
.. ..+ .+..|.|...++ ++-.+-+++.. .| ++..+++.+++..++++| +..++|+++.+..
T Consensus 383 ~r~~~al~m~qSTSPsY~LmASLDva~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~ 461 (720)
T PRK13578 383 KRLNNAFMLHASTSPFYPLFAALDVNAKMHEGESG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTE 461 (720)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchh
Confidence 00 000 011233333332 22222333433 34 567788888899999988 7777787763210
Q ss_pred ---------------C--------------cc-EEEEEecCC---------CCCCHHHHHHHHHhcCceeeccccCCCCC
Q 011057 372 ---------------G--------------VP-LVAFSLKDN---------KRHDEFEVAELLRRFGWIVPAYTMPADAQ 412 (494)
Q Consensus 372 ---------------~--------------~~-~v~f~~~~~---------~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~ 412 (494)
. -+ =+++..++- .++....+.+.|+++||.+-- .
T Consensus 462 ~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~-------~ 534 (720)
T PRK13578 462 QIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEK-------C 534 (720)
T ss_pred hhcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEe-------c
Confidence 0 00 011111111 123368899999888987521 1
Q ss_pred CceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 413 HITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 413 ~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
+...+=+-++...|.+++++|+++|.++-+...
T Consensus 535 d~~~vL~l~s~g~t~~~~~~Lv~aL~~f~~~~~ 567 (720)
T PRK13578 535 DLNSILFLLTPAEDMAKLQQLVAMLARFEKHIE 567 (720)
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 111232344556688999999999988755443
No 301
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=1.1e-13 Score=141.58 Aligned_cols=346 Identities=13% Similarity=0.032 Sum_probs=201.5
Q ss_pred hcCCCCCcccccc----cCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASFV----TTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++. -.+.+|.+.+++.+.++......... ...+.+.++.+.|++++.-.. ..+.|+++|+
T Consensus 40 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~-~~~~~~~~la~~L~~~~~~~~-----~~v~f~~SGs 113 (433)
T PRK08117 40 VDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGV-IYYESILKLAEELAEITPGGL-----DCFFFSNSGA 113 (433)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccc-cCCHHHHHHHHHHHHhCCCCC-----CEEEEeCcHH
Confidence 3566665544432 23567889999988887532211111 123445567777888873211 2488999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeE-EeCCCcchHHHHHHHHcCC-------------eeEEEeccCCccc----
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNI-VTGANVQVCWEKFARYFEV-------------ELKEVKLSEGYYV---- 189 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~v-i~~~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~---- 189 (494)
||+..+++.++.. .| +..| .+....|.+..-+....+- .+..+|.... +.
T Consensus 114 eA~e~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 181 (433)
T PRK08117 114 EAIEGALKLAKHV-------TK----RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYC-DRCPKG 181 (433)
T ss_pred HHHHHHHHHHHHh-------cC----CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCcc-cccccc
Confidence 9999999988653 11 2344 4566678765544332221 1233433210 11
Q ss_pred --------cCHHHHHHhhhh-----CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccc
Q 011057 190 --------MDPVKAVEMVDE-----NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIA 252 (494)
Q Consensus 190 --------~d~~~L~~~i~~-----~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~ 252 (494)
.|+++|++.++. +..+|++--.....|.+.| +++|.++|++| |+++++|++|.++..
T Consensus 182 ~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tG~gr 255 (433)
T PRK08117 182 EDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRH------GILLIFDEVQTGFGR 255 (433)
T ss_pred CchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHc------CCEEEEecchhccCc
Confidence 255667776642 2344554444446688888 99999999999 999999999986421
Q ss_pred cccCCccc-ccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 253 PFLYPELE-WDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 253 ~~~~~~~~-~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
...... ..+++ ..|.+ +..|.+.++..+|+++.+++ .. ..+. .. ....+ ++.++....+..++
T Consensus 256 --~G~~~~~~~~gv-~pDi~--t~sK~lg~G~pigav~~~~~-i~-~~~~------~~-~~~~T--~~~np~~~aaa~a~ 319 (433)
T PRK08117 256 --TGEWFAAQTFGV-VPDIM--TIAKGIASGLPLSAVVASKE-LM-EQWP------LG-SHGTT--FGGNPVACAAALAT 319 (433)
T ss_pred --cccchhHhhcCC-CCCEe--ehhhhccCCCcceeEEEcHH-HH-hhcc------CC-CCCCC--CCcCHHHHHHHHHH
Confidence 111100 11222 24654 45688876666888776543 22 1111 00 01111 22233455556666
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCC-eEEeecCCCc-cEEEEEecCCC----CCCHHHHHHHHHhcCceeecc
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLEKTGR-FNIVSKDEGV-PLVAFSLKDNK----RHDEFEVAELLRRFGWIVPAY 405 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~~~~~~~-~~v~f~~~~~~----~~~~~~l~~~L~~~Gi~v~~~ 405 (494)
|+.+..+ ...++..++.+++++.|+++.. +.++...... -++.+.+..+. ......+.+.|.++|+++...
T Consensus 320 L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 396 (433)
T PRK08117 320 LEVIKEE---KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLC 396 (433)
T ss_pred HHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeec
Confidence 6666443 3566777778888888876531 2222211122 34455553221 112456788899999986321
Q ss_pred ccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 406 TMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 406 ~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
.....++|++....+|+++++.+++.|+++++++.
T Consensus 397 -----g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~ 431 (433)
T PRK08117 397 -----GNAGNVLRMIPPLTVTKEEIDEGLDILDEALTEYE 431 (433)
T ss_pred -----CCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 11245799998888999999999999999887763
No 302
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.65 E-value=8.5e-14 Score=142.38 Aligned_cols=341 Identities=15% Similarity=0.015 Sum_probs=187.9
Q ss_pred hcCCCCCcccccc----cCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASFV----TTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++. -.+.+|.+.+++.+.+++.......++ ...++++.|++++... ..+.+++||+
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~----~~~~lae~l~~~~~~~------~~v~~~~sGs 114 (423)
T TIGR00713 45 VDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTE----AEILLAKEIISRVPSV------EMVRFVNSGT 114 (423)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCH----HHHHHHHHHHHhCCcc------cEEEEeCCHH
Confidence 3566666555543 235678899999988876432111222 2334666687776542 2489999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCC-cchHHHHHHHHcC--CeeEEEeccC--------Ccc---ccCHH
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGAN-VQVCWEKFARYFE--VELKEVKLSE--------GYY---VMDPV 193 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G--~~v~~v~~~~--------~~~---~~d~~ 193 (494)
||+..+++.++... | +.+|+.... .|.....+....+ ......+..+ +.. ..|++
T Consensus 115 eA~e~Alk~ar~~~-------g----r~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 183 (423)
T TIGR00713 115 EATMSAVRLARGYT-------G----RDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLE 183 (423)
T ss_pred HHHHHHHHHHHHhh-------C----CCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHH
Confidence 99999999886631 1 245665444 5543322222111 1100000000 000 13789
Q ss_pred HHHHhhh---hCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCC
Q 011057 194 KAVEMVD---ENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLP 266 (494)
Q Consensus 194 ~L~~~i~---~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (494)
+|++++. +++++|++......+|.+.| +++|.++|++| ++++++|++|.++... .......+++
T Consensus 184 ~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~r~g--~~~~~~~~~~- 254 (423)
T TIGR00713 184 ALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEY------GSLLIFDEVMTGFRVA--LGGAQEYFGV- 254 (423)
T ss_pred HHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEEccccccccC--cchhHHHhCC-
Confidence 9999887 45667766533334788866 78999999999 9999999999765321 0000001222
Q ss_pred CceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhH-HHHHHH
Q 011057 267 LVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEG-YRNVME 345 (494)
Q Consensus 267 ~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g-~~~~~~ 345 (494)
..|.+ ++.|.+.+++.+|+++.++. .. +.+.....+. ...+ +..+.....+..++|+.+..++ ++...+
T Consensus 255 ~pDi~--t~sK~l~~G~pig~v~~~~~-i~-~~~~~~~~~~----~~~T--~~~~~~~~aaa~a~l~~~~~~~~~~~~~~ 324 (423)
T TIGR00713 255 EPDLT--TLGKIIGGGLPVGAFGGRRE-IM-ERLAPEGPVY----QAGT--LSGNPLAMAAGLATLKLLDEEGVYTELDE 324 (423)
T ss_pred Ccchh--hhhhhhcCCCceeeeeEHHH-HH-HhhCcCCCee----eccC--CCCCHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 24544 45688876677898887542 22 2111000000 0001 1222344455556666665443 233333
Q ss_pred HHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCC--------CC---HHHHHHHHHhcCceeeccccCCCCCCc
Q 011057 346 NCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKR--------HD---EFEVAELLRRFGWIVPAYTMPADAQHI 414 (494)
Q Consensus 346 ~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~--------~~---~~~l~~~L~~~Gi~v~~~~~~~~~~~~ 414 (494)
....+.+.|.+.+++.+ +...... ...++.+.+..... .+ ...+.+.|.++|+++.... .
T Consensus 325 ~~~~~~~~l~~~~~~~~-~~~~v~~-~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------~ 395 (423)
T TIGR00713 325 LAKRLAEGLSEVLEDTG-IPHTVNR-VGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQ-------F 395 (423)
T ss_pred HHHHHHHHHHHHHHhcC-CCeEEEe-eccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCC-------c
Confidence 34444555555566664 4332111 23555554432100 11 2368888999998864321 1
Q ss_pred eEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 415 TVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 415 ~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
..+|++. .+|.++++.+++.|++++++
T Consensus 396 ~~~~l~~--~~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 396 EACFLSA--AHTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred cceeeEC--CCCHHHHHHHHHHHHHHHhh
Confidence 2367654 36899999999999888764
No 303
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.65 E-value=2.2e-13 Score=145.43 Aligned_cols=350 Identities=13% Similarity=0.031 Sum_probs=212.3
Q ss_pred CCCCCCCCHHHHHHHHHHhhhhcCCCCCcccccccCCChHH-HHHHHHHH---hcc-cCCCCCCChhhHHHHHHHHHHHH
Q 011057 31 TMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPE-CDKLMMAA---INK-NYVDMDEYPVTTELQNRCVNIIA 105 (494)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~---~~~-~~~~~~~~~~~~~le~~~~~~la 105 (494)
.+|+ +.++.++++.++++...+......++.+++....|. +.+.+.+- +.. .+..++.+++..+..-+...+++
T Consensus 56 ~lp~-~~sE~e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~ 134 (954)
T PRK12566 56 DLPA-ALDEQAALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTI 134 (954)
T ss_pred CCCC-CCCHHHHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHH
Confidence 4544 679999999999987655433322344444444454 42444321 111 23344556788888888999999
Q ss_pred HHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHH----HHcCCeeEEE
Q 011057 106 RLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFA----RYFEVELKEV 181 (494)
Q Consensus 106 ~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~----~~~G~~v~~v 181 (494)
+|+|++.. ..-.--++|.+-- |++++++.... .+.++++++..|+.+...+ +..|++++.
T Consensus 135 ~LtGm~va-----NASl~D~atA~aE-A~~ma~~~~~~---------k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~- 198 (954)
T PRK12566 135 DLTGLDLA-----NASLLDEATAAAE-AMALAKRVAKS---------KSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV- 198 (954)
T ss_pred HHhCchhh-----hhhhccchhHHHH-HHHHHHHHhhc---------CCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-
Confidence 99999862 1222223333222 33323221100 0247999999998766543 344666553
Q ss_pred eccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc
Q 011057 182 KLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW 261 (494)
Q Consensus 182 ~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (494)
+++++.+++++..|++.+|++. |.+.++++|.+++|+. |.+++ +++.-... ..+.+..
T Consensus 199 -----------~~~~~~~~~~~~~v~vq~P~~~-G~i~d~~~i~~~~h~~------gal~~-~~~d~laL-~ll~~Pg-- 256 (954)
T PRK12566 199 -----------DAVDNLAAHAVFGALLQYPDTH-GEIRDLRPLIDQLHGQ------QALAC-VAADLLSL-LVLTPPG-- 256 (954)
T ss_pred -----------cchhhcCCCCEEEEEEECCCCc-eEEccHHHHHHHHHHc------CCEEE-EEeCHHHH-hCCCChh--
Confidence 2334455567888989999765 9999999999999999 88754 55442211 1133322
Q ss_pred cccCCCceEEEEcCcccC----CcCCceEEEEEeCCCCcccccccc-----cCCCCCC------C-CCccc--------c
Q 011057 262 DFRLPLVKSINVSGHKYG----LVYAGIGWVIWRNKEDLPEELIFH-----INYLGAD------Q-PTFTL--------N 317 (494)
Q Consensus 262 ~~~~~~~D~~~~~~hK~l----~~p~g~G~~~~~~~~~~~~~~~~~-----~~y~~~~------~-~~~~~--------~ 317 (494)
..|+|+++.+++.++ ++++..|++.+++. + .+.++-+ .+-.+.. + +...+ -
T Consensus 257 ---e~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~-~-~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNI 331 (954)
T PRK12566 257 ---ELGADVVLGSTQRFGVPMGYGGPHAAYFACRDD-Y-KRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNI 331 (954)
T ss_pred ---hcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHH-H-HhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchh
Confidence 238999988777664 33456788887764 2 1222111 0110000 0 00000 0
Q ss_pred cCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHh
Q 011057 318 FSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRR 397 (494)
Q Consensus 318 ~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~ 397 (494)
+|..+..++.....+.++|.+|++++.++++.++.||.++|++.| +++..++ .+..+.+++.. +..++.++..+
T Consensus 332 CT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g-~~~~~~~-fF~~~~v~~~~----~~~~~~~~a~~ 405 (954)
T PRK12566 332 CTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKG-IKRLNRH-FFDTLTLEVGG----AQAAIIESAEA 405 (954)
T ss_pred hHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC-CccccCC-ccceEEEEccC----CHHHHHHHHHH
Confidence 222122222233334678999999999999999999999999954 9887663 56666666521 46788888889
Q ss_pred cCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHH
Q 011057 398 FGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDI 437 (494)
Q Consensus 398 ~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l 437 (494)
+|+-++.+ +...+.+|+.+.+|.+|++.+++.+
T Consensus 406 ~~~n~r~~-------~~~~~~~s~de~~~~~~~~~~~~~f 438 (954)
T PRK12566 406 ARINLRIL-------GRGRLGVSLDETCDEATVARLFDIF 438 (954)
T ss_pred CCCeeEEe-------CCCeEEEEeCCCCCHHHHHHHHHHh
Confidence 99987542 1235889999988888877666655
No 304
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.64 E-value=4.5e-16 Score=148.87 Aligned_cols=254 Identities=21% Similarity=0.216 Sum_probs=161.2
Q ss_pred ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA 147 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~ 147 (494)
++|++.+++.++. .....|+..+...++++. +++++|.+. .+|+.+||+||.+++.+..+++
T Consensus 7 ~~~~m~~a~~~a~-~gd~~Yg~D~~~~~l~~~----i~~l~g~e~-------a~f~~sGT~An~~al~~~~~~~------ 68 (290)
T PF01212_consen 7 PTPAMLEAMAAAN-VGDDAYGEDPTTARLEER----IAELFGKEA-------ALFVPSGTMANQLALRAHLRPG------ 68 (290)
T ss_dssp S-HHEEHHHHHTT-SB-CCTTSSHHHHHHHHH----HHHHHTSSE-------EEEESSHHHHHHHHHHHHHHTT------
T ss_pred CCHHHHHHHHccc-cCCcccCCChhHHHHHHH----HHHHcCCCE-------EEEeCCCChHHHHHHHHHHhcC------
Confidence 6788888884443 322357777777666655 899999975 6799999999999999887532
Q ss_pred cCCCCCCCeEEeCCCcchHHHH---HHHHcCCeeEEEeccCCccccCHHHHHHhhhh------CCeEEEEeeCCCCc-cc
Q 011057 148 EGKPFDKPNIVTGANVQVCWEK---FARYFEVELKEVKLSEGYYVMDPVKAVEMVDE------NTICVAAILGSTLN-GE 217 (494)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~s~~~---~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~------~t~~vv~~~~~~~t-G~ 217 (494)
..|++...+|....+ .....|++++.++.+++ +.+|+++|++.+.. ++++|+++.+++.. |.
T Consensus 69 -------~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~-G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~ 140 (290)
T PF01212_consen 69 -------ESVICADTAHIHFDETGAIEELSGAKLIPLPSDDD-GKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGT 140 (290)
T ss_dssp -------EEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTG-TBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB
T ss_pred -------CceeccccceeeeeccchhhHhcCcEEEECCCccc-CCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCe
Confidence 579999999976544 23557999999987763 68999999999976 35677777777654 66
Q ss_pred c---cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCC
Q 011057 218 F---EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKE 294 (494)
Q Consensus 218 ~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~ 294 (494)
+ +.+++|+++||++ |+.+|+|||--+-.......... ++ ..++|+++++++|.++.|.| ++++ .++.
T Consensus 141 ~~s~~el~ai~~~a~~~------gl~lhmDGARl~~a~~~~~~~~~-e~-~~~~D~v~~~~tK~~g~~~G-avl~-~~~~ 210 (290)
T PF01212_consen 141 VYSLEELRAISELAREH------GLPLHMDGARLANAAAALGVSLA-EI-AAGADSVSFGGTKNGGAPGG-AVLA-GNKE 210 (290)
T ss_dssp ---HHHHHHHHHHHHHH------T-EEEEEETTHHHHHCHHHHHHH-HH-HTTSSEEEEETTSTT-SSSE-EEEE-ESHH
T ss_pred eCCHHHHHHHHHHHHhC------ceEEEEehhhHHHhhhcccccHH-HH-hhhCCEEEEEEEcccccccc-eEEE-echH
Confidence 5 5678899999999 99999999864322100000001 11 14799999999999877754 3444 4443
Q ss_pred CcccccccccCCCCCCCCCcccccCcchHHHHH--HH--HHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeec
Q 011057 295 DLPEELIFHINYLGADQPTFTLNFSKGSSQVIA--QY--YQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSK 369 (494)
Q Consensus 295 ~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a--~~--~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (494)
.+...... ..++++.. +......+ ++ .++..+. .......+.++++++|.+.|++++ +.+..+
T Consensus 211 ~i~~~~~~-~k~~gg~~--------~~~G~~~a~~~~~~~~l~~l~--~~~~~~~~~~~~A~~La~~l~~~~-~~~~~~ 277 (290)
T PF01212_consen 211 FIAKARRQ-RKRLGGGM--------RQAGVLAAAELYQFAALRALE--LWLERARHANAMAKRLAAGLEALG-GVLPRP 277 (290)
T ss_dssp HHHHHHHH-HHHHTHHH--------HHTTHHHHHHHHHHHHHCHEE--CSHHHHHCHHHHHHCHHHCHHEEC-EEEETT
T ss_pred HHHHHHHH-HHHhccCe--------eecceeeeechhhHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHCC-CcccCC
Confidence 33222111 11222110 00001111 11 2232222 124567788899999999999998 555444
No 305
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.64 E-value=4.5e-13 Score=136.71 Aligned_cols=355 Identities=12% Similarity=-0.013 Sum_probs=198.6
Q ss_pred hcCCCCCcccccc----cCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASFV----TTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++. -.+.+|.+.+++.+.++.-.... .+....+.+.++.+.|++++.... ..+.++++|+
T Consensus 43 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~-~~~~~~~~~~~la~~l~~~~p~~~-----~~v~f~~sGs 116 (442)
T PRK13360 43 HDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAP-AFQMGHPKAFELANRIAEIAPGGL-----NHVFFTNSGS 116 (442)
T ss_pred CCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcc-cCCcCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcH
Confidence 3566666544432 23567889989988877532111 111122334457777888763211 2489999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcC------------CeeEEEeccCC----ccc-
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFE------------VELKEVKLSEG----YYV- 189 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G------------~~v~~v~~~~~----~~~- 189 (494)
||+..|++.++.....+ |. ..+.+|| .....|....-+....| ..+..+|...+ .+.
T Consensus 117 eA~e~AlklAr~~~~~~----g~-~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 191 (442)
T PRK13360 117 ESVDTALKIALAYHRAR----GE-GSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSK 191 (442)
T ss_pred HHHHHHHHHHHHHHHhc----CC-CCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCC
Confidence 99999999987642111 11 1123555 45556654332222221 12333433210 000
Q ss_pred -------cCHHHHHHhhhh----CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccc-ccc
Q 011057 190 -------MDPVKAVEMVDE----NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGF-IAP 253 (494)
Q Consensus 190 -------~d~~~L~~~i~~----~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~-~~~ 253 (494)
-..++|++++.. +..+|++--.....|.+.| +++|.++|++| |+++++|+++.++ -.
T Consensus 192 ~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~------g~llI~DEv~tG~Grt- 264 (442)
T PRK13360 192 GQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKH------GILLIFDEVITGFGRL- 264 (442)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCCC-
Confidence 024577777752 3344554444446688888 99999999999 9999999999543 21
Q ss_pred ccCCcccc-cccCCCceEEEEcCcccCCcC-CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 254 FLYPELEW-DFRLPLVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 254 ~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
...... .+++ ..|.+++ .|.+.++ ..+|.++++++ .. +.+...+..........++ +.++....+..++
T Consensus 265 --G~~~a~~~~gv-~PDivt~--gK~l~gG~~P~gav~~~~~-i~-~~~~~~~~~~~~~~~~~T~--~g~pl~~aaa~a~ 335 (442)
T PRK13360 265 --GAPFAAQYFGV-TPDLLTC--AKGLTNGAIPMGAVFVSSE-IH-DAFMQGPEAGIEFFHGYTY--SGHPLACAAALAT 335 (442)
T ss_pred --ccchhhhhcCC-CCceeee--eeccccCccceEEEEEcHH-HH-HHhhcCCccccccccCCCC--CCCHHHHHHHHHH
Confidence 111111 1222 3677654 4877543 34666666542 22 1111111000000011222 2234556667777
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCcc-EEEEEecCCC---CCCHHHHHHHHHhcCceeecccc
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVP-LVAFSLKDNK---RHDEFEVAELLRRFGWIVPAYTM 407 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~-~v~f~~~~~~---~~~~~~l~~~L~~~Gi~v~~~~~ 407 (494)
|+.+.+++ ..++..++.++|++.|+++..+..+.+-...+ +..+.+.... ......+.++|.++|+++..
T Consensus 336 L~~l~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~--- 409 (442)
T PRK13360 336 LDLYEREG---LLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRY--- 409 (442)
T ss_pred HHHHHhCC---HHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEe---
Confidence 87776653 55677788888888888764332222211122 3334442211 11245788899999998642
Q ss_pred CCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 408 PADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 408 ~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
. ...+|++....+|.+|||++++.|+++++++
T Consensus 410 ----~-~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 410 ----T-GDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred ----c-CCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 1 2469999888899999999999999988754
No 306
>PLN00144 acetylornithine transaminase
Probab=99.63 E-value=1.1e-12 Score=131.85 Aligned_cols=336 Identities=15% Similarity=0.019 Sum_probs=193.7
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++........ ...+...++.+.|+++.+.+ .+.++++|+|
T Consensus 13 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~-------~v~f~~sGse 83 (382)
T PLN00144 13 EGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNV--YHTIPQVELAKRLVASSFAD-------RVFFCNSGTE 83 (382)
T ss_pred CCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCcccc--ccCHHHHHHHHHHHhcCCCC-------eEEEeCCcHH
Confidence 45555443332 23355788999998888753221111 11333445677787766443 4899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCC------CCCeEE-eCCCcchHHHHHHHHcCCe------------eEEEeccCCccc
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPF------DKPNIV-TGANVQVCWEKFARYFEVE------------LKEVKLSEGYYV 189 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~------~~~~vi-~~~~~h~s~~~~~~~~G~~------------v~~v~~~~~~~~ 189 (494)
|+..|++.++.....+ +... .+.+|+ +....|....-+....+-. +..+| .
T Consensus 84 A~e~AlklAr~~~~~~----~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~------~ 153 (382)
T PLN00144 84 ANEAAIKFARKYQRVR----APDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVE------Y 153 (382)
T ss_pred HHHHHHHHHHHHHhcc----CCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeC------C
Confidence 9999999997642111 1100 023454 5556776554444433321 12222 1
Q ss_pred cCHHHHHHhhhhC-CeEEEEeeCCCCcccc--cC--HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccc-c
Q 011057 190 MDPVKAVEMVDEN-TICVAAILGSTLNGEF--ED--VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWD-F 263 (494)
Q Consensus 190 ~d~~~L~~~i~~~-t~~vv~~~~~~~tG~~--~~--l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~ 263 (494)
-|+++|++.+..+ +++|++.-..++.|.+ ++ +++|.++|++| ++++++|+++.++.. .......+ +
T Consensus 154 ~d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~------g~llI~DEv~tg~gr--~g~~~~~~~~ 225 (382)
T PLN00144 154 GNLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEA------GALLVFDEVQCGLGR--TGYLWAHEAY 225 (382)
T ss_pred CCHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--cchHhhhhhc
Confidence 3789999888643 4555554444453444 34 88999999999 999999999986521 11111111 1
Q ss_pred cCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHH
Q 011057 264 RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNV 343 (494)
Q Consensus 264 ~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~ 343 (494)
++ ..|.++ ..|.+.++..+|+++.+.+ .. +.+.. .....+ ...++....+..+.|+.+....+
T Consensus 226 ~~-~PDi~t--~sK~l~~G~pig~v~~~~~-~~-~~~~~-------~~~~~T--~~~~pl~~aaa~a~l~~i~~~~~--- 288 (382)
T PLN00144 226 GV-EPDIMT--LAKPLAGGLPIGAVLVTEK-VA-SAINP-------GDHGST--FAGGPLVCNAALAVLDKISKPGF--- 288 (382)
T ss_pred CC-CCCEEE--ecccccCCcceEEEEEcHH-HH-hccCC-------CCCCCC--CCCCHHHHHHHHHHHHHHhhchH---
Confidence 22 356544 4598887788899887543 22 11110 001111 22223445556666777755444
Q ss_pred HHHHHHHHHHHHHHHh----hCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEE
Q 011057 344 MENCHENAMVLKEGLE----KTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRV 419 (494)
Q Consensus 344 ~~~~~~~a~~l~~~L~----~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRv 419 (494)
.++..++.+++++.|+ +.+.+.-+.. ...++.+.+. .+...+.+++.++|+.+... ....++|+
T Consensus 289 ~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg--~G~~~~l~l~----~~~~~~~~~~~~~Gv~i~~~------~~~~~lrl 356 (382)
T PLN00144 289 LASVAKKGEYLRELLRRKLGGNPHVKEVRG--VGLLVGIQLD----VPAGPLVDACRDSGLLVLTA------GKGDVVRL 356 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceeeec--CceEEEEEec----CccHHHHHHHHHCCeEEeec------CCCCEEEE
Confidence 4444455555555444 4432211111 3345566662 24568999999999987432 11367999
Q ss_pred EeccCCChHHHHHHHHHHHHHHHHH
Q 011057 420 VIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 420 s~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
+....++.++++.+++.|++++..+
T Consensus 357 ~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 357 VPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred eCCCccCHHHHHHHHHHHHHHHHhc
Confidence 9987788999999999998888654
No 307
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.63 E-value=6.6e-14 Score=146.64 Aligned_cols=297 Identities=16% Similarity=0.164 Sum_probs=192.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCe
Q 011057 98 NRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVE 177 (494)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~ 177 (494)
.+..+..|++||.+. .-++++|+|.+|..++.++..+ ++.|+++..+|-|+..++.+.|+.
T Consensus 198 ~eAe~~AA~~fgAd~------tyfvvNGTS~~n~av~~a~~~~-------------Gd~VLvdRN~HKSv~haLilsga~ 258 (714)
T PRK15400 198 KEAEEYIARVFNADR------SYMVTNGTSTANKIVGMYSAPA-------------GSTVLIDRNCHKSLTHLMMMSDVT 258 (714)
T ss_pred HHHHHHHHHHhCCCc------EEEEeCchHHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHcCCe
Confidence 346677999999985 3567788889988777766432 368999999999999999999999
Q ss_pred eEEEeccCCc----cccC-----HHHHHHhhhhCC-----eEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEE
Q 011057 178 LKEVKLSEGY----YVMD-----PVKAVEMVDENT-----ICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHV 243 (494)
Q Consensus 178 v~~v~~~~~~----~~~d-----~~~L~~~i~~~t-----~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (494)
+++++...+. +.++ .+.++++|.+.+ +.++++++| +.|.+-++++|.++|+.+ + +||
T Consensus 259 PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd~~~I~~~~~~~------~--ilv 329 (714)
T PRK15400 259 PIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYNTDFIKKTLDVK------S--IHF 329 (714)
T ss_pred EEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecCHHHHHHHhCCC------C--EEE
Confidence 9998654221 2345 899999997642 368888885 559999999999999877 6 799
Q ss_pred ecccccccccccCCccc--ccccCCCc---e--EEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCccc
Q 011057 244 DAASGGFIAPFLYPELE--WDFRLPLV---K--SINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTL 316 (494)
Q Consensus 244 D~a~~~~~~~~~~~~~~--~~~~~~~~---D--~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 316 (494)
|+||++... | .+.++ .-+. .++ | +++-|.||.+.+-...+++-++.. .-...+ ..-|. .+
T Consensus 330 DEAwgah~~-F-~p~~~~~sam~-~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~-vd~~~~--n~a~~-------m~ 396 (714)
T PRK15400 330 DSAWVPYTN-F-SPIYEGKCGMS-GGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNEETF--NEAYM-------MH 396 (714)
T ss_pred Eccchhhhc-c-CcccCCcChhh-cCCCCCCceEEEEchhhcccchhHHhHHHHcCC-CCHHHH--HHHHH-------HH
Confidence 999987532 2 22221 1111 234 4 899999999976666666655432 100100 00011 01
Q ss_pred ccCcchHHH-HHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhhCCC------eEEeecCC----------------C
Q 011057 317 NFSKGSSQV-IAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEKTGR------FNIVSKDE----------------G 372 (494)
Q Consensus 317 ~~s~~~~~~-~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~~~~------~~~~~~~~----------------~ 372 (494)
..|.|...+ +++-.+.+++.. .| ++..++..+++..++++|.++++ |+++.+.. .
T Consensus 397 ~STSPsY~l~ASLD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whg 475 (714)
T PRK15400 397 TTTSPHYGIVASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHG 475 (714)
T ss_pred cCCCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccC
Confidence 123323333 334444455543 44 56788899999999999998877 76664220 0
Q ss_pred -----------cc-EEEEEecC--------CCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHH
Q 011057 373 -----------VP-LVAFSLKD--------NKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAER 432 (494)
Q Consensus 373 -----------~~-~v~f~~~~--------~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~ 432 (494)
-+ =+.+..++ ..++....+.+.|.++||.+-- .+...+=+-++...|++++++
T Consensus 476 f~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~-------~d~~~iLfl~s~g~t~~~~~~ 548 (714)
T PRK15400 476 FKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEK-------TGPYNLLFLFSIGIDKTKALS 548 (714)
T ss_pred cccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEe-------cCCCeEEEEeCCCCCHHHHHH
Confidence 00 01122211 0356678899999999998521 122223355566779999999
Q ss_pred HHHHHHHHHHH
Q 011057 433 LVLDITKVLHE 443 (494)
Q Consensus 433 ~i~~l~~~~~~ 443 (494)
|+++|.++-+.
T Consensus 549 L~~aL~~f~~~ 559 (714)
T PRK15400 549 LLRALTDFKRA 559 (714)
T ss_pred HHHHHHHHHHh
Confidence 99998887544
No 308
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.63 E-value=4.4e-13 Score=136.91 Aligned_cols=356 Identities=13% Similarity=0.015 Sum_probs=198.8
Q ss_pred hcCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++ .-.+.+|.+.+++.+.++....... .....+...++.+.|++++.... ..+.|+++|+
T Consensus 46 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~sGs 119 (445)
T PRK09221 46 ADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPA-FQMGHPLAFELAERLAELAPGGL-----DHVFFTNSGS 119 (445)
T ss_pred CCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcH
Confidence 356666544433 2235578888888888765321111 11122334457777888764221 2489999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccC--C--ccc-
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSE--G--YYV- 189 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~--~--~~~- 189 (494)
||+..|++.++..+..+ |.+ .+.+|| .....|....-+....|. .+..+|... . .+.
T Consensus 120 eAve~AlklAr~~~~~~----g~~-~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (445)
T PRK09221 120 ESVDTALKIALAYHRAR----GQG-TRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSK 194 (445)
T ss_pred HHHHHHHHHHHHHHHhc----CCC-CCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCC
Confidence 99999999997643211 111 123454 455566543322222221 123333211 0 000
Q ss_pred -------cCHHHHHHhhhh----CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 190 -------MDPVKAVEMVDE----NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 190 -------~d~~~L~~~i~~----~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
...+++++.+.. +..+|++--.....|.+.| +++|.++|+++ |+++++|+++.++.-
T Consensus 195 ~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~------g~llI~DEV~tG~GR-- 266 (445)
T PRK09221 195 GQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKH------GILLIFDEVITGFGR-- 266 (445)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhCCCc--
Confidence 113567776652 3445555555556788888 99999999999 999999999965311
Q ss_pred cCCcccc-cccCCCceEEEEcCcccCCcC-CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELEW-DFRLPLVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~~-~~~~~~~D~~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
....... .+++ ..|.+++ .|.+.++ ..+|.++.+++ .. +.+.....+........++ +.++....+..++|
T Consensus 267 tG~~~~~~~~gv-~PDi~~~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~~~~T~--~~~pl~~aaa~a~L 339 (445)
T PRK09221 267 LGAAFAAERFGV-TPDIITF--AKGLTNGAIPMGAVIASDE-IY-DAFMQGPEYAIEFFHGYTY--SAHPVACAAGLATL 339 (445)
T ss_pred CchhhHHHhcCC-CCCEEEe--ccccccCcccceeeEEcHH-HH-HhhccCcccccccccccCC--CcCHHHHHHHHHHH
Confidence 1110000 1122 2476654 3766443 23566665542 22 2111111110000011222 22334455556777
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCcc-EEEEEecCC---CCCCHHHHHHHHHhcCceeeccccC
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVP-LVAFSLKDN---KRHDEFEVAELLRRFGWIVPAYTMP 408 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~-~v~f~~~~~---~~~~~~~l~~~L~~~Gi~v~~~~~~ 408 (494)
+.+.+++ ..++..++.++|++.|+++.++..+.+-...+ +..+.+... .......+.++|.++|+++..
T Consensus 340 ~~i~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~---- 412 (445)
T PRK09221 340 DIYREED---LFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRY---- 412 (445)
T ss_pred HHHHhcc---HHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEee----
Confidence 7776553 56788889999999998774333222211222 334454321 111245788999999998642
Q ss_pred CCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 409 ADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 409 ~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
....+|++....+|+++||++++.|+++++++
T Consensus 413 ----~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 413 ----TGDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred ----cCCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 12469999888899999999999999988764
No 309
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=5.5e-13 Score=136.11 Aligned_cols=345 Identities=13% Similarity=0.011 Sum_probs=201.7
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++........ ....+.+.++.+.|+++++... ..+.|+++|+|
T Consensus 39 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~sGsE 112 (443)
T PRK08360 39 EGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPI-YGFPVEPLLLAEKLIEIAPGDN-----PKVSFGLSGSD 112 (443)
T ss_pred CCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCcccc-ccCcHHHHHHHHHHHHhCCCCC-----CEEEEcCCHHH
Confidence 56665544443 23355788999998888753221111 1123344457777888775431 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCC-c--cc---
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEG-Y--YV--- 189 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~-~--~~--- 189 (494)
|+..|++.++... | +..|+ .....|.....+....|. .+..+|.... . +.
T Consensus 113 Ave~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (443)
T PRK08360 113 ANDGAIKFARAYT-------K----RRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEP 181 (443)
T ss_pred HHHHHHHHHHHhc-------C----CCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCch
Confidence 9999999987531 1 23454 344566544333333331 1233333210 0 00
Q ss_pred -----cCHHHHHHhhh-----hCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEeccccccccccc
Q 011057 190 -----MDPVKAVEMVD-----ENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL 255 (494)
Q Consensus 190 -----~d~~~L~~~i~-----~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (494)
-+++.+++.+. +++++|++.-..+++|.+.| +++|.++|++| |+++++|++|.++.. .
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~~g~gr--~ 253 (443)
T PRK08360 182 GSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEH------GILLVVDEVQSGLGR--T 253 (443)
T ss_pred hhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--C
Confidence 12445666664 34566666655578898755 88999999999 999999999986421 1
Q ss_pred CCccc-ccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHH
Q 011057 256 YPELE-WDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIR 334 (494)
Q Consensus 256 ~~~~~-~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~ 334 (494)
..... ..+++ ..|.+++ .|.+.+++.+|+++.+.+ .. +.+.. .....+ ...++....+..++|+.
T Consensus 254 G~~~a~~~~~~-~pDiitl--sK~l~~G~pigav~~~~~-i~-~~~~~-------~~~~~T--~~~~p~~~aaa~a~l~~ 319 (443)
T PRK08360 254 GKWFAIEHFGV-EPDIITL--GKPLGGGLPISATIGRAE-IM-DSLPP-------LAHAFT--LSGNPVASAAALAVIEE 319 (443)
T ss_pred ccchhhhhcCC-CCCEEEe--cccccCCceeEEEEEcHH-HH-hhhcC-------CCCCCC--CCcCHHHHHHHHHHHHH
Confidence 11101 01222 3566655 688877677898887542 22 21110 000111 22223344555566666
Q ss_pred hcHhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEeecCC-CccEEEEEecCCC---C---CCHHHHHHHHHhcCceeeccc
Q 011057 335 LGFEGYRNVMENCHENAMVLKEGLEKTG-RFNIVSKDE-GVPLVAFSLKDNK---R---HDEFEVAELLRRFGWIVPAYT 406 (494)
Q Consensus 335 l~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~---~---~~~~~l~~~L~~~Gi~v~~~~ 406 (494)
+..+ +..++..++.++|++.|+++. .+.++.... ...++.+.+.... . .....+.++|.++|+++...
T Consensus 320 l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~- 395 (443)
T PRK08360 320 IEEK---NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF- 395 (443)
T ss_pred HHHc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec-
Confidence 6544 356677777778888776641 122222211 3345566653211 0 11346888999999986431
Q ss_pred cCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 407 MPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 407 ~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
+...+|++....+|+++++.+++.|++++..+++
T Consensus 396 ------~~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 396 ------SGNVLRIQPPLTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred ------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2357999888899999999999999999988754
No 310
>PRK06541 hypothetical protein; Provisional
Probab=99.63 E-value=5.5e-13 Score=136.70 Aligned_cols=353 Identities=15% Similarity=0.053 Sum_probs=202.2
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++...... ......+...++.+.|++++..+. ..+.++++|+|
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~-~~~~~~~~~~~la~~l~~~~p~~~-----~~v~f~~sGse 123 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFP-LWSYAHPPAIELAERLAALAPGDL-----NRVFFTTGGSE 123 (460)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCcc-ccccCCHHHHHHHHHHHHhCCCCc-----CEEEEcCCcHH
Confidence 56666544443 233557889999988887532211 111223334457777888764321 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCC-c---cccC
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEG-Y---YVMD 191 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~-~---~~~d 191 (494)
|+..|++.++..+.. .|.. .+.+|+ +....|....-+....|. .+..+|...- . +.-+
T Consensus 124 Ave~AlklAr~~~~~----~g~~-~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 198 (460)
T PRK06541 124 AVESAWKLAKQYFKL----TGKP-GKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDD 198 (460)
T ss_pred HHHHHHHHHHHHHHh----cCCC-CccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCC
Confidence 999999999764321 1111 123444 455667654433332221 1333432210 0 1112
Q ss_pred --------HHHHHHhhhh---CCeEEEEeeC-CCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccc-cccc
Q 011057 192 --------PVKAVEMVDE---NTICVAAILG-STLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGF-IAPF 254 (494)
Q Consensus 192 --------~~~L~~~i~~---~t~~vv~~~~-~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~-~~~~ 254 (494)
++.+++.+.. +..+.+++.| ..+.|.+.| +++|.++|+++ |+++++|+++.++ -.
T Consensus 199 ~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~------g~llI~DEV~tGfGR~-- 270 (460)
T PRK06541 199 PEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRY------DVLLVSDEVICAFGRL-- 270 (460)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCcC--
Confidence 3667777752 3444555555 667788888 99999999999 9999999999543 21
Q ss_pred cCCcccc-cccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCccccccccc-CCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 255 LYPELEW-DFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHI-NYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 255 ~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~-~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
...... .+++ ..|.++ ..|.+.+++ .+|+++.+++ .. ..+.... .+.. ..+ ...++...++..+.
T Consensus 271 -G~~~a~~~~gv-~PDivt--~gK~l~~G~~pigav~~~~~-i~-~~~~~~~~~~~~----~~T--~~gnp~~~aaala~ 338 (460)
T PRK06541 271 -GEMFGCERFGY-VPDIIT--CAKGITSGYSPLGAMIASDR-LF-EPFLDGPTMFLH----GYT--FGGHPVSAAVALAN 338 (460)
T ss_pred -chhhhhhhcCC-CCCEEE--ecccccCCccceeEEEEcHH-HH-HHhhcCCCcccc----CCC--CCCCHHHHHHHHHH
Confidence 111011 1222 367776 458776654 5788877653 21 1111100 0000 011 22223445555666
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC-CCccEEEEEecCCC----CCC--------HHHHHHHHHhc
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKD-EGVPLVAFSLKDNK----RHD--------EFEVAELLRRF 398 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~~v~f~~~~~~----~~~--------~~~l~~~L~~~ 398 (494)
++.+..++ ..++..++.++|.+.|+++....++..- ....++.+.+.... ..+ ...+.+.|.++
T Consensus 339 l~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 415 (460)
T PRK06541 339 LDIFEREG---LLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEA 415 (460)
T ss_pred HHHHHhcc---HHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhC
Confidence 66665543 4677888889999999876322221111 13345666653211 000 12567889999
Q ss_pred CceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 399 GWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 399 Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
|+++... ..+..++|++....+|++++|.+++.|+++++++
T Consensus 416 Gi~~~~~-----~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06541 416 GLYCRAD-----DRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEA 456 (460)
T ss_pred CeEEEec-----CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9987431 1234679999888899999999999999998765
No 311
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.62 E-value=1e-13 Score=133.61 Aligned_cols=308 Identities=17% Similarity=0.121 Sum_probs=197.0
Q ss_pred HHHHHHHHhCCCCCCCCCcceeeecC-hhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCee
Q 011057 100 CVNIIARLFNAPLEDSETAVGVGTVG-SSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVEL 178 (494)
Q Consensus 100 ~~~~la~l~g~~~~~~~~~~~~~t~g-gt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (494)
+..-+-+..|+... ..++++.. .-+++.+.+++++.+ + ....|+.+...|.+..+++...|+++
T Consensus 61 l~~d~~~~~G~~~~----~~~~~vP~atgm~l~l~l~~l~~r--~---------~a~~Viw~ridqkSc~kai~~AGl~~ 125 (389)
T PF05889_consen 61 LVLDALRLAGLRSV----KSCFVVPMATGMSLTLCLLALRMR--P---------KAKYVIWPRIDQKSCFKAIERAGLEP 125 (389)
T ss_dssp HHHHHHHHTTHTTH----CEEEEESS-HHHHHHHHHHHHHHH--C---------T--EEEEEEEETHHHHHHHHHTT-EE
T ss_pred HHHHHHHHcCCccc----cceEEEecccccHHHHHHHHHhcc--c---------CCceEEEeeccccchHHHHHhcCCeE
Confidence 33334455788741 22444443 445555666666522 1 12479999999999999999999999
Q ss_pred EEEecc--CCccccCHHHHHHhhhh---CCeEEEEeeCCCCcccccC-HHHHHHHHHHhhcccCCCceEEEecccccccc
Q 011057 179 KEVKLS--EGYYVMDPVKAVEMVDE---NTICVAAILGSTLNGEFED-VKLLNDLLAEKNKETGWDTPIHVDAASGGFIA 252 (494)
Q Consensus 179 ~~v~~~--~~~~~~d~~~L~~~i~~---~t~~vv~~~~~~~tG~~~~-l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~ 252 (494)
+.|+.. ++....|.+.+++.+++ +..+.++++.+...|...| +++|+++|++| |++.+|-+|||.-..
T Consensus 126 ~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~------~IPhlvNnAYgvQ~~ 199 (389)
T PF05889_consen 126 VVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEY------DIPHLVNNAYGVQSS 199 (389)
T ss_dssp EEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHH------T--EEEEGTTTTT-H
T ss_pred EEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHc------CCceEEccchhhhHH
Confidence 999863 44456778888888864 4567777888877788855 99999999999 999999999997321
Q ss_pred cccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 253 PFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 253 ~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
.+...+..-.....+|.++-+.-|-++.|.|-+.+...++..+. .....|.+. -+..+.+-....|
T Consensus 200 -~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~---~vs~~YpGR----------as~sp~ld~~itL 265 (389)
T PF05889_consen 200 -KCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGIL---AVSKEYPGR----------ASASPSLDLFITL 265 (389)
T ss_dssp -HHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHH---HHHHTSHSH----------BTSHHHHHHHHHH
T ss_pred -HHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHH---HHHHHhhhh----------hhcccchHHHHHH
Confidence 11111111222357899999999999999998877665543321 122344422 2234556677888
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCC---CeEEeecCCCccEEEEEecCCCC---CCHHHHHHHHHhcCceeeccc
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTG---RFNIVSKDEGVPLVAFSLKDNKR---HDEFEVAELLRRFGWIVPAYT 406 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~~v~f~~~~~~~---~~~~~l~~~L~~~Gi~v~~~~ 406 (494)
..+|..|+...+....+.-.++.++|++.. +-.+...|...-.+.|....-.. -+...|...|..+||.-...+
T Consensus 266 l~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV 345 (389)
T PF05889_consen 266 LSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVV 345 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEE
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceee
Confidence 999999999988888888888888886532 13444444233345566543222 235789999999998743222
Q ss_pred cCCCCCC--------ceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 407 MPADAQH--------ITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 407 ~~~~~~~--------~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
.|..... ..++-++.....+++|+|.|++.|+++++
T Consensus 346 ~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 346 TPGGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp ETSSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred ccCCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 2222111 25777766778899999999999999875
No 312
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.62 E-value=6.4e-13 Score=139.29 Aligned_cols=296 Identities=16% Similarity=0.146 Sum_probs=191.2
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCee
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVEL 178 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (494)
+..+..|++||.+. .-++++|+|.+|..++.++..+ ++.|+++..+|-|+..++.+.|+.+
T Consensus 199 eAe~~aA~~fgAd~------tyfvvNGTS~~n~av~~a~~~~-------------Gd~VLvdRN~HKSv~~aLilsga~P 259 (713)
T PRK15399 199 EAEEYIARTFGAEQ------SYIVTNGTSTSNKIVGMYAAPA-------------GSTLLIDRNCHKSLAHLLMMSDVVP 259 (713)
T ss_pred HHHHHHHHHhCCCc------EEEEeCChHHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHcCCee
Confidence 45677999999985 3567888899998877777432 3689999999999999999999999
Q ss_pred EEEeccCCc----cccCH-----HHHHHhhhhC-----CeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCc-eEEE
Q 011057 179 KEVKLSEGY----YVMDP-----VKAVEMVDEN-----TICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDT-PIHV 243 (494)
Q Consensus 179 ~~v~~~~~~----~~~d~-----~~L~~~i~~~-----t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~-~l~v 243 (494)
++++...+. +.++. +.++++|.+. ++.++++++| +.|.+-++++|.++| ++ .+||
T Consensus 260 VYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd~~~I~~~~---------g~~~ilv 329 (713)
T PRK15399 260 IWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYNTDWIKQTL---------DVPSIHF 329 (713)
T ss_pred EEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeCHHHHHHHh---------CCCEEEE
Confidence 998654211 23455 8899998753 3578888885 459999999999988 34 4589
Q ss_pred ecccccccccccCCccc--ccc-cCCCceEE---EEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccc
Q 011057 244 DAASGGFIAPFLYPELE--WDF-RLPLVKSI---NVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLN 317 (494)
Q Consensus 244 D~a~~~~~~~~~~~~~~--~~~-~~~~~D~~---~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 317 (494)
|+||++.. .| .+.++ .-+ ...++|.. +-|.||.+.+-...+++-++.. .-...+ ..-|. .+.
T Consensus 330 DEAhgah~-~F-~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~-vd~~~~--n~a~~-------m~~ 397 (713)
T PRK15399 330 DSAWVPYT-HF-HPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE-YDEETF--NEAFM-------MHT 397 (713)
T ss_pred eccchhhh-hc-CcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCC-CCHHHH--HHHHH-------HHc
Confidence 99998743 22 22111 111 11245666 9999999988777788877552 110111 10111 011
Q ss_pred cCcchHHH-HHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhhCCC------eEEeecCC-------------C----
Q 011057 318 FSKGSSQV-IAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEKTGR------FNIVSKDE-------------G---- 372 (494)
Q Consensus 318 ~s~~~~~~-~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~~~~------~~~~~~~~-------------~---- 372 (494)
.|.|...+ +++-.+.+++.. .| ++..++..+++..++++|.++++ |+++.+.. .
T Consensus 398 STSPsY~LmASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf 476 (713)
T PRK15399 398 STSPSYPIVASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGF 476 (713)
T ss_pred CCCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccc
Confidence 22323333 334344455543 44 56788889999999999988776 56654210 0
Q ss_pred ----------cc-EEEEEecC--------CCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHH
Q 011057 373 ----------VP-LVAFSLKD--------NKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERL 433 (494)
Q Consensus 373 ----------~~-~v~f~~~~--------~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~ 433 (494)
-+ =+++..++ ..+++...+.+.|.++||.+-- .+...+=+-++...|++++++|
T Consensus 477 ~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~-------~d~~~vL~l~s~g~t~~~~~~L 549 (713)
T PRK15399 477 KDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEK-------TGPYNLLFLFSIGIDKTKAMGL 549 (713)
T ss_pred cccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEe-------cCCCeEEEEeCCCCCHHHHHHH
Confidence 00 01122211 1267788999999999998521 1122233455666789999999
Q ss_pred HHHHHHHHHH
Q 011057 434 VLDITKVLHE 443 (494)
Q Consensus 434 i~~l~~~~~~ 443 (494)
+++|.++-+.
T Consensus 550 ~~aL~~f~~~ 559 (713)
T PRK15399 550 LRGLTEFKRA 559 (713)
T ss_pred HHHHHHHHHh
Confidence 9999887544
No 313
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.61 E-value=1.9e-12 Score=131.50 Aligned_cols=338 Identities=13% Similarity=0.045 Sum_probs=196.4
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++....... + ...+...++.+.|++++..+. ..+.|+++|+|
T Consensus 73 dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~-~-~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~SGsE 145 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQ-E-LLDPLRALLAKTLAALTPGKL-----KYSFFCNSGTE 145 (442)
T ss_pred CCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCccc-c-cCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCchH
Confidence 45555544443 2335678898998888765332211 1 123344557777888764321 24889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCCccccCHHHH
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEGYYVMDPVKA 195 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~~~d~~~L 195 (494)
|+..|++.++..... .| +..|+ .....|....-+....|- .+..+|. -|.+++
T Consensus 146 A~e~AlklAr~~t~~----~g----r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~------~d~~~~ 211 (442)
T TIGR03372 146 SVEAALKLAKAYQSP----RG----KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF------GDIEAM 211 (442)
T ss_pred HHHHHHHHHHHHHhh----cC----CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC------CCHHHH
Confidence 999999999764311 11 23455 455567654444333221 1233332 256677
Q ss_pred HHhhhh------CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-ccc
Q 011057 196 VEMVDE------NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFR 264 (494)
Q Consensus 196 ~~~i~~------~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~ 264 (494)
++.++. +..+|++--.....|.+.| +++|.++|++| |+++++|+++.++-- ....... .++
T Consensus 212 ~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~------g~llI~DEV~tG~GR--tG~~~a~e~~g 283 (442)
T TIGR03372 212 LKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEF------GALLILDEVQTGMGR--TGKMFACEHEG 283 (442)
T ss_pred HHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeecccCCCc--cccchhhhhcC
Confidence 766642 2445555444445678877 99999999999 999999999965311 1111011 122
Q ss_pred CCCceEEEEcCcccCCcC-CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHH
Q 011057 265 LPLVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNV 343 (494)
Q Consensus 265 ~~~~D~~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~ 343 (494)
+ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+... .+.. ..+ +..++...++..++|+.+.+++ .
T Consensus 284 v-~PDivt~--gK~lg~G~~Pigavv~~~~-i~-~~~~~~-~~~~----~~T--~~gnp~~~Aaa~a~L~~i~~~~---l 348 (442)
T TIGR03372 284 V-QPDILCL--AKALGGGVMPIGATIATEA-VF-SVLFDN-PFLH----TTT--FGGNPLACAAALATINELLEKN---L 348 (442)
T ss_pred C-CCCeeee--hhhhcCCcccceEEEecHH-HH-Hhhhcc-Cccc----cCC--CCCCHHHHHHHHHHHHHHHhcc---H
Confidence 2 3677764 5877654 34677776542 22 211100 1110 011 1223355566667777776554 4
Q ss_pred HHHHHHHHHHHHHHHhhCCC-eE-Eeec-CCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEE
Q 011057 344 MENCHENAMVLKEGLEKTGR-FN-IVSK-DEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVV 420 (494)
Q Consensus 344 ~~~~~~~a~~l~~~L~~~~~-~~-~~~~-~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs 420 (494)
.++..++.++|++.|+++.. +. .+.+ .....++.+.+... .....+.+.|.++|+++.... .+...+|+.
T Consensus 349 ~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~--~~~~~i~~~l~~~Gvl~~~~~-----~~~~~lr~~ 421 (442)
T TIGR03372 349 PAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDN--EIGYAFAKELFQQNILVAGTL-----NNAKSIRIE 421 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCCh--HHHHHHHHHHHHCCcEEeecC-----CCCCEEEEE
Confidence 45666777777777766421 11 1111 11345677777432 134678999999999874321 123579999
Q ss_pred eccCCChHHHHHHHHHHHHHH
Q 011057 421 IREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 421 ~~~~~t~~~id~~i~~l~~~~ 441 (494)
....+|.+++|++++.|++++
T Consensus 422 Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 422 PPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred CCcccCHHHHHHHHHHHHHhC
Confidence 988999999999998888753
No 314
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.60 E-value=1.5e-12 Score=129.37 Aligned_cols=344 Identities=14% Similarity=0.060 Sum_probs=209.5
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhcccC-CCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 53 DGNPRLNLASFV----TTWMEPECDKLMMAAINKNY-VDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 53 ~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
+|+.++.|.++. ..+.+|.+.+++.+.+..-. ... .+ ...+...++.+.|.+++..+. .....++++|+
T Consensus 54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~-~~-~~~e~~v~~ae~L~~~~p~~~----~~~~~f~~sGa 127 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHT-RD-LYYEPYVELAEKLTALAPGSG----LKKVFFGNSGA 127 (447)
T ss_pred CCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccC-Cc-ccchhHHHHHHHHHHhCCccc----CCeEEecCCcH
Confidence 567776666642 33567999888887665522 211 11 111344456666777665431 13488999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCC-eEEeCCCcchHHHHHHHHcCC-------------eeEEEeccCC---cccc
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKP-NIVTGANVQVCWEKFARYFEV-------------ELKEVKLSEG---YYVM 190 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~-~vi~~~~~h~s~~~~~~~~G~-------------~v~~v~~~~~---~~~~ 190 (494)
|||-.|++.++... | +. .|-.....|....-++.+.|- .+..+|.... .+..
T Consensus 128 eA~E~AiKiAr~~T-------g----r~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~ 196 (447)
T COG0160 128 EAVEAAIKIARAYT-------G----RPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGI 196 (447)
T ss_pred HHHHHHHHHHHHHh-------C----CCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccC
Confidence 99999999997752 2 23 344666778766655555432 2566665421 0111
Q ss_pred --------CHHHHHHhhhh------CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccc
Q 011057 191 --------DPVKAVEMVDE------NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIA 252 (494)
Q Consensus 191 --------d~~~L~~~i~~------~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~ 252 (494)
..+.++..+.. ++.++++--.....|.+.| ++++.++|++| |+++++|++|.|+.-
T Consensus 197 ~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~------gillI~DEVQtG~GR 270 (447)
T COG0160 197 GGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREH------GILLIADEVQTGFGR 270 (447)
T ss_pred chhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc
Confidence 22345554432 2456666666666777744 78999999999 999999999987521
Q ss_pred cccCCcccc-cccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 253 PFLYPELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 253 ~~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
...-..+ .+++ ..|.++++ |-+.++..+|.++.+.. .. . |..+.. .+++ ..++...++..+.
T Consensus 271 --TG~~fa~E~~gv-~PDivt~a--K~ig~G~Pl~avv~r~e-i~-~-------~~~g~~-~~Tf--~GNpva~Aaa~Av 333 (447)
T COG0160 271 --TGKMFAFEHFGV-EPDIVTLA--KSLGGGLPLSAVVGRAE-IM-D-------WPPGGH-GGTF--GGNPVACAAALAV 333 (447)
T ss_pred --cccchhhhhcCC-CCCEEEec--ccccCCCceeEEeccHH-hc-c-------cCCccc-CCCC--CcCHHHHHHHHHH
Confidence 1111111 1122 47888865 88777777888876653 21 1 111111 1111 1223445555566
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEeecCCCc-cEEEEEecCCC------CCCHHHHHHHHHhcCceee
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLEKTG-RFNIVSKDEGV-PLVAFSLKDNK------RHDEFEVAELLRRFGWIVP 403 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~~-~~v~f~~~~~~------~~~~~~l~~~L~~~Gi~v~ 403 (494)
|+.+.++ ...++..++-+||+++|.++. .+.++.+-... -++.+.+..+. ..-...+.+++.++|+++.
T Consensus 334 L~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~ 410 (447)
T COG0160 334 LDVIEEE---NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLL 410 (447)
T ss_pred HHHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEe
Confidence 6666555 567777888888888887763 24455554322 34455543211 1125678899999998764
Q ss_pred ccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 404 AYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 404 ~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
+. ....+++|+.---.++.+++|.+++.|++++++.
T Consensus 411 ~~-----G~~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 411 TC-----GPHGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred cc-----CCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 32 1236789999888899999999999999988764
No 315
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=3e-14 Score=127.21 Aligned_cols=281 Identities=14% Similarity=0.104 Sum_probs=185.5
Q ss_pred cceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHH
Q 011057 118 AVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVE 197 (494)
Q Consensus 118 ~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~ 197 (494)
..+.+..|+.|.+-+.+++.... ++.+|+...+++..+.-.+...+++|+.+|.+++ |.++.|++.+
T Consensus 87 dnic~GvGsDE~ID~iiR~~c~P------------GkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pd-F~lnvdai~e 153 (375)
T KOG0633|consen 87 DNICVGVGSDELIDLIIRCVCDP------------GKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPD-FSLNVDAIAE 153 (375)
T ss_pred cceEEecCcHHHHHHHHhheecC------------CccceeecCCcceeEEEEeecCCceEEEecCCCC-ccccHHHHHH
Confidence 34778889999998888777442 2457888778887666667788999999999986 9999999999
Q ss_pred hhhhC--CeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcC
Q 011057 198 MVDEN--TICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSG 275 (494)
Q Consensus 198 ~i~~~--t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 275 (494)
.+..+ .+++++++|.||||.+...+.|.++.+-- . +.+++||+||-.|.. ......+--+.++.-++-.-+
T Consensus 154 vl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p-~----nglVVvDEAYidFsg--~~S~~~lV~kYpNLivlqTlS 226 (375)
T KOG0633|consen 154 VLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMP-D----NGLVVVDEAYIDFSG--VESRMKLVKKYPNLIVLQTLS 226 (375)
T ss_pred HHhccccceEEEEcCCCCCCcccccHHHHHHHHhCC-C----CcEEEEeeeeEeecc--ccccchHhHhCCceeehhhhh
Confidence 88754 78999999999999998888888887543 1 789999999976532 111111111234444444445
Q ss_pred cccCCcCCceEEEEEeCCCCccccc-ccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc---HhHHHHHHHHHHHHH
Q 011057 276 HKYGLVYAGIGWVIWRNKEDLPEEL-IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG---FEGYRNVMENCHENA 351 (494)
Q Consensus 276 hK~l~~p~g~G~~~~~~~~~~~~~~-~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~---~~g~~~~~~~~~~~a 351 (494)
+.++.++.++|+.++... +.+.+ ...++|- .+.++-.++|+++. -..++.....+.+.+
T Consensus 227 KsfGLAGiRvG~~~~~~~--ia~iln~~KaPYN---------------iS~~~s~~AL~Als~~n~kkme~~rdaiv~er 289 (375)
T KOG0633|consen 227 KSFGLAGIRVGYGAFPLS--IAEILNRAKAPYN---------------ISVAGSVAALAALSDSNGKKMEDVRDAIVRER 289 (375)
T ss_pred hhcCcceeEeecccccHH--HHHHHHhccCCcc---------------ccchhHHHHHHhcCcccchHHHHHHHHHHHHH
Confidence 557777777887765332 11111 1112222 12223334555554 234566667777888
Q ss_pred HHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHH-HHHhcCceeeccccCCCCCCceEEEEEeccCCChHHH
Q 011057 352 MVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAE-LLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLA 430 (494)
Q Consensus 352 ~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~-~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~i 430 (494)
.+|...|.+++.+.-+..+...+++.+++.+.++.-...+.. .+...|++|+-+... ..=.+++|++++ |+|+.
T Consensus 290 ~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse--~~c~G~lRitvG---t~Een 364 (375)
T KOG0633|consen 290 ERLFKELTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSE--EGCKGYLRITVG---TPEEN 364 (375)
T ss_pred HHHHHHhhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCc--cccceeEEEEcC---Ccccc
Confidence 899999999885543222336789998887643222334443 344678887543322 223568999998 78889
Q ss_pred HHHHHHHHHH
Q 011057 431 ERLVLDITKV 440 (494)
Q Consensus 431 d~~i~~l~~~ 440 (494)
+.+++.+++.
T Consensus 365 tvL~k~~K~~ 374 (375)
T KOG0633|consen 365 TVLMKCLKQF 374 (375)
T ss_pred hHHHHHHHhh
Confidence 9888888765
No 316
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=2.1e-12 Score=131.94 Aligned_cols=341 Identities=13% Similarity=0.004 Sum_probs=195.5
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++.... ........+.+.++.+.|++++..+. ...+.|+++|+|
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~~~~~~~~~~~lAe~L~~~~p~~~----~~~v~f~~SGsE 126 (441)
T PRK05769 52 DGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLH-YSLTDFYYEPAVELAERLVEIAPGGF----EKKVFFTNSGTE 126 (441)
T ss_pred CCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccC-ccCcccCCHHHHHHHHHHHHhCCCCC----CCEEEECCchHH
Confidence 45544443333 2335578898888888765322 11111123445567788888774211 124899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC-------------eeEEEeccCCccc-----
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLSEGYYV----- 189 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~----- 189 (494)
|+..|++.++.. .| +.+|+ .....|....-++...|. .+..++.... ..
T Consensus 127 A~e~AlklAr~~-------tg----r~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 194 (441)
T PRK05769 127 SNEAAIKIARYH-------TG----RKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNP-YRNPWGI 194 (441)
T ss_pred HHHHHHHHHHHH-------hC----CCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCcc-ccccccC
Confidence 999999999764 12 24455 455567655444433221 1333433210 00
Q ss_pred --------cCHHHHHH-hhh----h-CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEeccccccc
Q 011057 190 --------MDPVKAVE-MVD----E-NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFI 251 (494)
Q Consensus 190 --------~d~~~L~~-~i~----~-~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~ 251 (494)
-+++.+++ .++ . +..+|++--.....|.+.| +++|.++|++| |+++++|+++.++.
T Consensus 195 ~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~------g~lli~DEv~tG~g 268 (441)
T PRK05769 195 ENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKY------GILLIDDEVQTGMG 268 (441)
T ss_pred CchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCC
Confidence 11234555 222 2 2344444444445688888 99999999999 99999999998632
Q ss_pred ccccCCccc-ccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHH
Q 011057 252 APFLYPELE-WDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYY 330 (494)
Q Consensus 252 ~~~~~~~~~-~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~ 330 (494)
. ...... ..+++ ..|.++++ |.+.++..+|+++.+++ .. ... ... ...++.+ ++....+..+
T Consensus 269 r--~G~~~a~~~~gv-~pDivt~~--K~l~~G~p~gav~~~~~-i~-~~~---~~~-----~~~T~~g--~p~~~aaa~a 331 (441)
T PRK05769 269 R--TGKMFAIEHFGV-EPDIITLA--KAIAGGLPLGAVIGRAE-LM-FLP---PGS-----HANTFGG--NPVAAAAALA 331 (441)
T ss_pred c--ccceehhhccCC-CCCEEEEc--ccccCCcccEEEEEehh-hh-hcC---CCC-----CCCCCCc--CHHHHHHHHH
Confidence 1 111001 11222 35777653 77666666788776653 22 111 001 1112222 2344555556
Q ss_pred HHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCC-eEEeecCC-CccEEEEEecCCC-C---CCHHHHHHHHHhcCceeec
Q 011057 331 QLIRLGFEGYRNVMENCHENAMVLKEGLEKTGR-FNIVSKDE-GVPLVAFSLKDNK-R---HDEFEVAELLRRFGWIVPA 404 (494)
Q Consensus 331 al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~~~~~-~~~~v~f~~~~~~-~---~~~~~l~~~L~~~Gi~v~~ 404 (494)
+|+.+.+ +..++..++.++|++.|+++.. +.++.... ...++.+.+.... . .....+.+.+.++|+++..
T Consensus 332 ~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~ 407 (441)
T PRK05769 332 TLEELEE----GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLG 407 (441)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEec
Confidence 6666644 4567777888888888876531 22222211 2345666663221 0 1134677888999998632
Q ss_pred cccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 405 YTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 405 ~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
.+...+|++....+|.+|||++++.|++++..+
T Consensus 408 -------~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 408 -------AGKSAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred -------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 233579999888889999999999999988653
No 317
>PRK06105 aminotransferase; Provisional
Probab=99.60 E-value=1.3e-12 Score=134.13 Aligned_cols=356 Identities=12% Similarity=0.029 Sum_probs=199.3
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ ...+.+|.+.+++.+.++........+....+.+.++.+.|++++..+. ..+.|+++|+|
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGse 120 (460)
T PRK06105 46 AGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPM-----SKVFFTNSGSE 120 (460)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHH
Confidence 56666554443 2335678999999888876332111111223444557777888874321 34899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCCccc------
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEGYYV------ 189 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~~------ 189 (494)
|+..|++.++.....+ |. ..+.+|+ +....|.....+....|. .+..++... .+.
T Consensus 121 Ave~AlKlar~~~~~~----g~-t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~ 194 (460)
T PRK06105 121 ANDTVVKLVWYYNNAL----GR-PEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPH-YYRFGLPGE 194 (460)
T ss_pred HHHHHHHHHHHHHHhc----CC-CCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCc-ccccccCCC
Confidence 9999999986532111 11 1123455 456677654433332221 122232211 000
Q ss_pred -------cCHHHHHHhhh----hCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccc-ccc
Q 011057 190 -------MDPVKAVEMVD----ENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGF-IAP 253 (494)
Q Consensus 190 -------~d~~~L~~~i~----~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~-~~~ 253 (494)
...+++++.+. ++..+|++--.....|.+.| +++|.++|++| |+++++|+++.++ ...
T Consensus 195 ~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~------~~llI~DEv~tG~GRtG 268 (460)
T PRK06105 195 SEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKY------DILLVADEVICGFGRTG 268 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCeEEEeccccCCCcCc
Confidence 11356777764 22344544433445577766 89999999999 9999999999553 211
Q ss_pred ccCCcccc-cccCCCceEEEEcCcccCCcC-CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 254 FLYPELEW-DFRLPLVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 254 ~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
..... .+++ ..|.++++ |.+.++ ..+|+++.+++ .. +.+.......+...-..+ +..++....+..++
T Consensus 269 ---~~f~~~~~~v-~PDi~~~g--K~lggG~~P~~av~~~~~-i~-~~~~~~~~~~~~~~h~~T--~~gnpl~~aaa~a~ 338 (460)
T PRK06105 269 ---NMFGCETFGI-KPDILVMS--KQLSSSYQPLSAVLMNEK-VY-DPIADESGKIGTFGHGFT--ASGHPVAAAVALEN 338 (460)
T ss_pred ---hhhhHHhcCC-CCCeeeee--cccccCcccceEEEEcHH-HH-HHHhcccccCcccccCCC--CCCCHHHHHHHHHH
Confidence 10011 1122 36777653 877554 24677766542 21 211111000000000111 22223445556667
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-CccEEEEEecCCC----CCC-----HHHHHHHHHhcCce
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GVPLVAFSLKDNK----RHD-----EFEVAELLRRFGWI 401 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~----~~~-----~~~l~~~L~~~Gi~ 401 (494)
|+.+.++ +..++..++.++|.+.|+++....++.+-. ...+..+.+.... ..+ ...+.+.+.++|++
T Consensus 339 L~~i~~~---~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl 415 (460)
T PRK06105 339 LAIIEER---DLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVI 415 (460)
T ss_pred HHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeE
Confidence 7777654 456778888888888887763232222211 2335556653211 011 24678888999998
Q ss_pred eeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 402 VPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 402 v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
+.. .+ .++|++....+|++|+|.+++.|+++++++.+
T Consensus 416 ~~~-------~g-~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 416 SRA-------MG-DTLAFCPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred EEe-------cC-CEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 632 12 36898877678999999999999999987754
No 318
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.60 E-value=1.9e-12 Score=126.39 Aligned_cols=338 Identities=14% Similarity=0.050 Sum_probs=202.6
Q ss_pred hcCCCCCcccc----cccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLAS----FVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+||.|+.+.. ....+.+|.+.+++.+.+..... ++ ..+++|-++.+.+.++++.- ..+-|+++||
T Consensus 50 vDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~-fg---~Pte~Ei~~Aell~~~~p~~------e~vrfvnSGT 119 (432)
T COG0001 50 VDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLS-FG---APTELEVELAELLIERVPSI------EKVRFVNSGT 119 (432)
T ss_pred CCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcCC-CC---CCCHHHHHHHHHHHHhcCcc------cEEEEecchh
Confidence 35665543222 22335678899999998876532 32 34567777889999988773 2489999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeE-EeCCCcchHHHHHHHHcC-------------Ce------eEEEeccCCc
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNI-VTGANVQVCWEKFARYFE-------------VE------LKEVKLSEGY 187 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~v-i~~~~~h~s~~~~~~~~G-------------~~------v~~v~~~~~~ 187 (494)
||++.+++.+|... | +++| .+....|.......-..| +. +..+|
T Consensus 120 EAtmsAiRlARa~T-------g----R~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~----- 183 (432)
T COG0001 120 EATMSAIRLARAYT-------G----RDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLP----- 183 (432)
T ss_pred HHHHHHHHHHHHhh-------C----CCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEec-----
Confidence 99999999997642 2 2445 457777765554433322 11 22223
Q ss_pred cccCHHHHHHhhhhC---CeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc
Q 011057 188 YVMDPVKAVEMVDEN---TICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE 260 (494)
Q Consensus 188 ~~~d~~~L~~~i~~~---t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~ 260 (494)
-.|++++++++.+. ..+|++--.-.+.|.+.| +++|.++|+++ |++||.|++..+|-.++. ..+
T Consensus 184 -yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~------G~lLI~DEViTGFR~~~g--Gaq 254 (432)
T COG0001 184 -YNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEH------GALLIFDEVITGFRVALG--GAQ 254 (432)
T ss_pred -CCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHc------CcEEEEecchhhcccCCc--ccc
Confidence 25889999998864 455555545556688755 57799999999 999999999987654321 111
Q ss_pred ccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH-hH
Q 011057 261 WDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF-EG 339 (494)
Q Consensus 261 ~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~-~g 339 (494)
..+++ ..|..+ .-|.++++..+|.+-.+.+ .+....+..+-|..+ + .+.++....+..++++.+.. ++
T Consensus 255 ~~~gi-~PDltt--lGKiIGGGlP~ga~gGr~e-iM~~~~p~g~vyqaG-----T--~sgnplamaAG~atl~~l~~~~~ 323 (432)
T COG0001 255 GYYGV-EPDLTT--LGKIIGGGLPIGAFGGRAE-IMEQLAPLGPVYQAG-----T--LSGNPLAMAAGLATLEELMTEEG 323 (432)
T ss_pred cccCc-Ccchhh--hhhhhcCCcceeeeccHHH-HHhhhCCCCCccccC-----C--CCCcHHHHHHHHHHHHHHHhccc
Confidence 11222 256654 5599888888887755432 332111222223322 2 23334566667777777655 33
Q ss_pred -HHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCC-----------HHHHHHHHHhcCceeecccc
Q 011057 340 -YRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHD-----------EFEVAELLRRFGWIVPAYTM 407 (494)
Q Consensus 340 -~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~-----------~~~l~~~L~~~Gi~v~~~~~ 407 (494)
|+...+.-.+++.-|.+.+.+.+ +...... ...++.+.+......+ ...+...|.++|++++.
T Consensus 324 ~y~~l~~~~~~L~~gl~~~~~~~g-~~~~v~~-~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~p--- 398 (432)
T COG0001 324 VYERLDALGERLAEGLRAAAERHG-IPLTVNR-VGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAP--- 398 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCeEEee-ecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCC---
Confidence 44333333444444444444554 4443332 3456666664421111 23555688899997533
Q ss_pred CCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 408 PADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 408 ~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
... . ...++..+|+++||+++++++++++++..
T Consensus 399 -s~~-e----a~flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 399 -SQF-E----AGFLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred -ccc-c----ceeeecccCHHHHHHHHHHHHHHHHHhhc
Confidence 111 1 12345567999999999999999888754
No 319
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.60 E-value=7.8e-13 Score=134.95 Aligned_cols=337 Identities=15% Similarity=0.045 Sum_probs=191.4
Q ss_pred cCCCCCccccccc----CCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASFVT----TWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++.. .+.+|.+.+++.+.++.....+ .....+.++.++|++++.-. ..+.++++|+|
T Consensus 48 dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~----~~~~~~~~la~~L~~~~~~~------~~v~~~~sGse 117 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFG----APTELEVELAELVIELVPSI------EMVRMVNSGTE 117 (426)
T ss_pred CCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCC----CCCHHHHHHHHHHHHhCCCC------CEEEEecCHHH
Confidence 5666666555432 2467889888888887632211 12334446777788876311 23889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccC-CccccCHHH
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSE-GYYVMDPVK 194 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~-~~~~~d~~~ 194 (494)
|+..++..++... | +.+|+ .....|....-+....|. ..+.++.+. ..-..|+++
T Consensus 118 A~e~Aik~a~~~~-------g----~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 186 (426)
T PRK00062 118 ATMSAIRLARGYT-------G----RDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEA 186 (426)
T ss_pred HHHHHHHHHHHHh-------C----CCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHH
Confidence 9999999987631 1 23555 455566543222221110 000010000 000247889
Q ss_pred HHHhhhh---CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCC
Q 011057 195 AVEMVDE---NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPL 267 (494)
Q Consensus 195 L~~~i~~---~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 267 (494)
+++.+.+ ++.+|++......+|.+.| +++|.++|++| ++++++|++|.++.. ........+++ .
T Consensus 187 l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~G~r~--g~~~~~~~~~~-~ 257 (426)
T PRK00062 187 VEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEH------GALLIFDEVMTGFRV--ALGGAQGYYGV-T 257 (426)
T ss_pred HHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeechhcccc--CCccHHHHhCC-C
Confidence 9888864 4556666555567798888 99999999999 999999999986521 10000001121 2
Q ss_pred ceEEEEcCcccCCcCCceEEEEEeCCCCcccccccc-cCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHH
Q 011057 268 VKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFH-INYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMEN 346 (494)
Q Consensus 268 ~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~-~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~ 346 (494)
.|.+ +..|.+.+++.+|+++.+++ .. +.+... ..+.. .+ ...++....+..++|+.+..+ +..++
T Consensus 258 pDi~--~~gK~l~~G~p~ga~~~~~~-i~-~~~~~~~~~~~~-----~T--~~~~p~~~aaa~a~L~~~~~~---~~~~~ 323 (426)
T PRK00062 258 PDLT--TLGKIIGGGLPVGAFGGRRE-IM-EQLAPLGPVYQA-----GT--LSGNPLAMAAGLATLKLLKEP---GFYEE 323 (426)
T ss_pred cchH--hhhhHhhCCCcceeeeEHHH-HH-HhhccCCCceec-----cc--CcCCHHHHHHHHHHHHHHhcc---hHHHH
Confidence 3543 34588766666787765432 22 211100 00110 01 122234455566667666443 35566
Q ss_pred HHHHHHHHHHHHhh----CCCeEEeecCCCccEEEEEecCCCCC--------C---HHHHHHHHHhcCceeeccccCCCC
Q 011057 347 CHENAMVLKEGLEK----TGRFNIVSKDEGVPLVAFSLKDNKRH--------D---EFEVAELLRRFGWIVPAYTMPADA 411 (494)
Q Consensus 347 ~~~~a~~l~~~L~~----~~~~~~~~~~~~~~~v~f~~~~~~~~--------~---~~~l~~~L~~~Gi~v~~~~~~~~~ 411 (494)
..++.+++++.|++ .+ +..-..+ ...++.+.+...... + ...+.+.|.++|+++.....
T Consensus 324 ~~~~~~~~~~~l~~~~~~~~-~~~~vrg-~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~---- 397 (426)
T PRK00062 324 LEALTKRLAEGLKEAAKKAG-IPLTVNR-VGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQF---- 397 (426)
T ss_pred HHHHHHHHHHHHHHHHHHcC-CceEEEE-ecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCCc----
Confidence 66677777777664 34 3322222 345666666432100 1 35788999999998744211
Q ss_pred CCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 412 QHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 412 ~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
..++++ ..+|+++++.+++.|++++..+
T Consensus 398 ---~~~~~~--~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 398 ---EAGFVS--AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred ---Cceeee--ccCCHHHHHHHHHHHHHHHHhh
Confidence 124554 5679999999999999988754
No 320
>PRK05965 hypothetical protein; Provisional
Probab=99.59 E-value=4.1e-12 Score=130.32 Aligned_cols=359 Identities=14% Similarity=0.030 Sum_probs=201.3
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.+++.......+....+...++.+.|++++..+. ..+.|+++|+|
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGSE 118 (459)
T PRK05965 44 SGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSL-----NHVYFTLGGSD 118 (459)
T ss_pred CCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCChhH
Confidence 56666554443 2235578999999888876332111111123334457777888763221 34899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCC---ccccC-
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEG---YYVMD- 191 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~---~~~~d- 191 (494)
|+..|++.++..+..+ |.. .+.+|| .....|....-+....|. .+..++.... .+.-|
T Consensus 119 Ave~AlKlAr~~~~~~----g~~-~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (459)
T PRK05965 119 AVDSAVRFIRHYWNAT----GRP-SKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDP 193 (459)
T ss_pred HHHHHHHHHHHHHHhc----CCC-CccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCCh
Confidence 9999999997654211 111 123454 555667654333222221 1233332210 00112
Q ss_pred -------HHHHHHhhhh----CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccC
Q 011057 192 -------PVKAVEMVDE----NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLY 256 (494)
Q Consensus 192 -------~~~L~~~i~~----~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~ 256 (494)
++++++.+.. +..+|++--.....|.+.| +++|.++|++| |+++|+|+++.++.- ..
T Consensus 194 ~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~------gillI~DEV~tGfGR--tG 265 (459)
T PRK05965 194 QAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACREL------GILFVADEVITGFGR--TG 265 (459)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhccCcc--Cc
Confidence 2567777752 3345555433334465532 78999999999 999999999977521 11
Q ss_pred Ccccc-cccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHH
Q 011057 257 PELEW-DFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIR 334 (494)
Q Consensus 257 ~~~~~-~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~ 334 (494)
..... .+++ ..|.+++. |.+.++. .+|.++++++ .. +.+...........-..| ++.++....+..++|+.
T Consensus 266 ~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~h~~T--~~gnpl~~Aaa~a~L~~ 338 (459)
T PRK05965 266 PLFACEAEGV-VPDLMTVA--KGLTSGYVPMGAVLMSDH-VY-QGIADGAGAAAPVGHGYT--YSAHPVSAAVGLEVLRL 338 (459)
T ss_pred hhhhHhhcCC-CCCeEEec--hhhccCCcceeEEEEcHH-HH-HHHhccccccccccccCC--CCCCHHHHHHHHHHHHH
Confidence 10111 1222 47888764 8876663 6788877653 21 111110000000000112 22233455556667777
Q ss_pred hcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-CccEEEEEecCCC----CCC-----HHHHHHHHHhcCceeec
Q 011057 335 LGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GVPLVAFSLKDNK----RHD-----EFEVAELLRRFGWIVPA 404 (494)
Q Consensus 335 l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~----~~~-----~~~l~~~L~~~Gi~v~~ 404 (494)
+.++ +..++..++.++|.++|+++....++.+-. ...++.+.+.... ..+ ...+.+.+.++|+++..
T Consensus 339 l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~ 415 (459)
T PRK05965 339 YHEG---GLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRA 415 (459)
T ss_pred HHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEe
Confidence 7655 356677788888888887753222222211 2335556553211 001 34677888999998642
Q ss_pred cccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 405 YTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 405 ~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
.+..++|+.....+|+++++.+++.|+++++++..
T Consensus 416 -------~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~ 450 (459)
T PRK05965 416 -------FGDGVLGFAPALCCTEGEFDLIFERTRKTLDDVLA 450 (459)
T ss_pred -------cCCcEEEEECCCcCCHHHHHHHHHHHHHHHHHHhc
Confidence 13456888877778999999999999999988744
No 321
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.59 E-value=1.4e-12 Score=133.38 Aligned_cols=347 Identities=14% Similarity=0.078 Sum_probs=198.4
Q ss_pred hcCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++ .-.+.+|.+.+++.+.++........ ....+.+.++.+.|++++.... ...+.|+++|+
T Consensus 39 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~----~~~v~f~~SGs 113 (445)
T PRK08593 39 VDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPA-YMYHEPLVRLAKKLCELAPGDF----EKRVTFGLSGS 113 (445)
T ss_pred CCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCcccc-ccCCHHHHHHHHHHHHhCCCCC----CCEEEECCchH
Confidence 356666544332 23355799999998888753221111 1123444557777888764321 02489999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC-------------eeEEEeccCCc----cc
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLSEGY----YV 189 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~----~~ 189 (494)
||+..|++.++... | +.+|+ .....|....-+....+. ++..+|..+.. ..
T Consensus 114 eA~e~AiklAr~~t-------g----r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 182 (445)
T PRK08593 114 DANDGIIKFARAYT-------G----RPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEE 182 (445)
T ss_pred HHHHHHHHHHHHhh-------C----CCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccC
Confidence 99999999987531 2 23454 455677765444433331 13344432110 00
Q ss_pred cC-------HHHHHHhhh-----hCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEeccccccccc
Q 011057 190 MD-------PVKAVEMVD-----ENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAP 253 (494)
Q Consensus 190 ~d-------~~~L~~~i~-----~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (494)
.+ ++++++.+. ++..+|++--.....|.+.| +++|.++|++| |+++++|+++.++.-
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~------g~llI~DEv~tg~Gr- 255 (445)
T PRK08593 183 PDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH------GILFAVDDIQQGLGR- 255 (445)
T ss_pred CcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc-
Confidence 11 234444443 23455555555556677766 99999999999 999999999965311
Q ss_pred ccCCccc-ccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 254 FLYPELE-WDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 254 ~~~~~~~-~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
...... ..+++ ..|.+++ .|.+.++..+|+++.+++ .. +.+. .....++ +..++....+..++|
T Consensus 256 -tG~~~a~~~~gv-~pDi~t~--gK~l~~G~p~gav~~~~~-i~-~~~~-------~~~~~~T--~~~~pl~~aaa~a~l 320 (445)
T PRK08593 256 -TGKWSSISHFNI-TPDLMSF--GKSLAGGMPMSAIVGRKE-IM-ESLE-------APAHLFT--TGANPVSCAAALATI 320 (445)
T ss_pred -CchHHHHHhcCC-CCCEeee--cccccCCcccEEEEEcHH-HH-hhhc-------cCCCCCC--CCCCHHHHHHHHHHH
Confidence 110000 01222 3576654 587765555788776542 22 2111 0001112 222234455566677
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEeecCC-CccEEEEEecCCC------CCCHHHHHHHHHhcCceeec
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTG-RFNIVSKDE-GVPLVAFSLKDNK------RHDEFEVAELLRRFGWIVPA 404 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~------~~~~~~l~~~L~~~Gi~v~~ 404 (494)
+.+.++ +..++..++.++|++.|+++. ...++..-. ...++.+.+.... ......+.+.|.++|+++..
T Consensus 321 ~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~ 397 (445)
T PRK08593 321 DMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIA 397 (445)
T ss_pred HHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEec
Confidence 766554 456677777778877777641 122222211 2234445443211 01135688899999998633
Q ss_pred cccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 405 YTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 405 ~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
. +..++|++....+|++|++.+++.++++++++.+
T Consensus 398 ~-------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 398 V-------AGNVLRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred c-------CCCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 1 2247999999999999999999999999988754
No 322
>PRK07678 aminotransferase; Validated
Probab=99.58 E-value=8.9e-12 Score=127.70 Aligned_cols=359 Identities=14% Similarity=0.035 Sum_probs=199.6
Q ss_pred hcCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++ .-.+.+|.+.+++.+.++........+ ..+...++.+.|+++++.. ..+.|+++|+
T Consensus 44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~--~~~~~~~lae~l~~~~~~~------~~v~f~~sGs 115 (451)
T PRK07678 44 IQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLTQ--SHEPAIKLAEKLNEWLGGE------YVIFFSNSGS 115 (451)
T ss_pred CCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccccc--CCHHHHHHHHHHHHhCCCC------CEEEEeCCcH
Confidence 356666544432 233557888888888877532211111 2233445777788887543 2488999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCCccc-----
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEGYYV----- 189 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~~----- 189 (494)
||+..|++.++..+..+ |. ..+.+|+ .....|....-+....|. .+..++... ...
T Consensus 116 eA~e~AlklAr~~t~~~----g~-~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 189 (451)
T PRK07678 116 EANETAFKIARQYHAQK----GE-PHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPD-CYRMPGIE 189 (451)
T ss_pred HHHHHHHHHHHHHHHhc----CC-CCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCc-cccccccC
Confidence 99999999997653211 11 1123454 455567654444333221 233333221 011
Q ss_pred ----cCH---HHHHHhhh----hCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccc-ccc
Q 011057 190 ----MDP---VKAVEMVD----ENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGF-IAP 253 (494)
Q Consensus 190 ----~d~---~~L~~~i~----~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~-~~~ 253 (494)
.|. +.+++.+. ++..+|++--.....|.+.| ++++.++|++| |+++++|+++.++ -..
T Consensus 190 ~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~------g~llI~DEV~tGfGRtG 263 (451)
T PRK07678 190 SEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKH------GALLISDEVICGFGRTG 263 (451)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhcCCcCc
Confidence 112 33566664 23455555433344566654 88999999999 9999999999654 211
Q ss_pred -ccCCcccccccCCCceEEEEcCcccCCcC-CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 254 -FLYPELEWDFRLPLVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 254 -~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
+.. .. .+++ ..|.+++ -|.+.++ ..+|.++++++ .. +.+.....+ ....-..| ++.++...++..++
T Consensus 264 ~~~~--~~-~~gv-~PDivt~--gK~lggG~~Pi~av~~~~~-i~-~~~~~~~~~-~~~~h~~T--~~gnp~~~aaa~a~ 332 (451)
T PRK07678 264 KAFG--FM-NYGV-KPDIITM--AKGITSAYLPLSATAVKKE-IY-EAFKGKGEY-EHFRHVNT--FGGNPAACALALKN 332 (451)
T ss_pred hhHH--HH-hcCC-CCCEEEe--ecccccCCcceeEEEEcHH-HH-HHHhccCcc-cccccCCC--CCcCHHHHHHHHHH
Confidence 000 01 1233 4788875 4877655 35787777653 21 221111000 00000112 22333555666677
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHhhC-CCeEEeecC-CCccEEEEEecCCC----CCC---HHHHHHHHHhcCcee
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLEKT-GRFNIVSKD-EGVPLVAFSLKDNK----RHD---EFEVAELLRRFGWIV 402 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~~~~-~~~~~v~f~~~~~~----~~~---~~~l~~~L~~~Gi~v 402 (494)
|+.+.+++ ..++..++.++|.+.|+++ ....++... ....++.+.+.... ..+ ...+.+.|.++|+++
T Consensus 333 l~~l~~~~---~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~ 409 (451)
T PRK07678 333 LEIMENEN---LIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLII 409 (451)
T ss_pred HHHHHhCC---HHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEE
Confidence 77776553 4566667777777777543 111111111 13345566653210 011 357888899999987
Q ss_pred eccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 403 PAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 403 ~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
.. ..|....+..++|++....+|++|||.+++.++++++.++
T Consensus 410 ~~-~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (451)
T PRK07678 410 GK-NGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERIK 451 (451)
T ss_pred ee-cCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 42 1222223346799998888899999999999999987653
No 323
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.58 E-value=3.3e-12 Score=126.73 Aligned_cols=317 Identities=16% Similarity=0.072 Sum_probs=190.5
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.+++-......++ .+...++.+.|+++++.+. +.++++|++
T Consensus 22 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~--~~~~~~la~~l~~~~~~~~-------v~~~~SGse 92 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFE--HEEKEEMLEELSKWVNYEY-------VYMGNSGTE 92 (364)
T ss_pred CCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcC--CHHHHHHHHHHHhhcCCCE-------EEEeCchHH
Confidence 45555444332 2334568888888888775322111122 2333456667888877643 899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEe-CCCcchHHHHHHHHcC-------Ce-----eEEEeccCCccccCHHHH
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIVT-GANVQVCWEKFARYFE-------VE-----LKEVKLSEGYYVMDPVKA 195 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G-------~~-----v~~v~~~~~~~~~d~~~L 195 (494)
|+..+++.++... | +++|+. +...|....-+....+ .. +..+| + .|++++
T Consensus 93 A~e~Alklar~~~-------g----r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~-----~-~d~~~l 155 (364)
T PRK04013 93 AVEAALKFARLYT-------G----RKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP-----F-NDVEAA 155 (364)
T ss_pred HHHHHHHHHHHHh-------C----CCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEec-----C-CCHHHH
Confidence 9999999987641 1 245654 4456654433333211 11 22222 2 267889
Q ss_pred HHhhhhCCeEEEEeeCCCCccccc-C---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccCCCceE
Q 011057 196 VEMVDENTICVAAILGSTLNGEFE-D---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRLPLVKS 270 (494)
Q Consensus 196 ~~~i~~~t~~vv~~~~~~~tG~~~-~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D~ 270 (494)
++.+.+++.+|++.......|.+. | +++|.++|+++ |++++.|+++.++-. ...... .+++ ..|.
T Consensus 156 ~~~i~~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~------gillI~DEv~tG~Rt---G~~~a~~~~gv-~PDi 225 (364)
T PRK04013 156 KEAITKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDV------GALLIADEVQSGLRT---GKFLAIEHYKV-EPDI 225 (364)
T ss_pred HHHhcCCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhcCCC---CchhHHHhcCC-CCCE
Confidence 999987788877766555555553 4 99999999999 999999999986421 111111 1222 3677
Q ss_pred EEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHH
Q 011057 271 INVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHEN 350 (494)
Q Consensus 271 ~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~ 350 (494)
+++ -|.+.++..+|.++.+.. . .. ... ..| +..++....+..+.|+.+.++++.+..+..
T Consensus 226 v~~--gK~lggG~P~~a~~~~~~-~-~~------~~~-----~~T--~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~--- 285 (364)
T PRK04013 226 VTM--GKGIGNGVPVSLTLTNFD-V-ER------GKH-----GST--FGGNPLACKAVAVTLRILRRERLVEKAGEK--- 285 (364)
T ss_pred EEe--cccccCCceeEEEEeccc-c-cC------CCc-----CCC--CCcCHHHHHHHHHHHHHHHhccHHHHHHHH---
Confidence 775 477766566777776543 1 00 000 111 222335556667777777766554433321
Q ss_pred HHHHHHHHhhCCCeEEeecCC-CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHH
Q 011057 351 AMVLKEGLEKTGRFNIVSKDE-GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTL 429 (494)
Q Consensus 351 a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~ 429 (494)
+. .+.. + .+.+-. ..-++.+.+.. ....+.+.+.++|+++.. .+..++|+.-...+|+++
T Consensus 286 ---l~-~l~~-~---~v~~vRG~Gl~~gve~~~----~~~~i~~~~~~~Gll~~~-------~g~~vlr~~Ppl~it~~~ 346 (364)
T PRK04013 286 ---FI-EIKG-E---RVVTTRGRGLMIGIVLKK----PVGKYVEELQNRGYLVHT-------AGQRVIRLLPPLIISKDT 346 (364)
T ss_pred ---HH-Hhcc-C---cceeeeeCcEEEEEEeCC----cHHHHHHHHHhCCcEEee-------CCCCEEEEeCCcccCHHH
Confidence 22 2221 2 111111 33466677743 245788999999998632 133679998887889999
Q ss_pred HHHHHHHHHHHHHHH
Q 011057 430 AERLVLDITKVLHEL 444 (494)
Q Consensus 430 id~~i~~l~~~~~~l 444 (494)
++.+++.|+++++++
T Consensus 347 i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 347 MEEAKSAIEGVINDI 361 (364)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988754
No 324
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.57 E-value=2.5e-12 Score=123.32 Aligned_cols=323 Identities=14% Similarity=0.043 Sum_probs=197.9
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcc
Q 011057 85 VDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQ 164 (494)
Q Consensus 85 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h 164 (494)
.+|+.+.|..++...+.+-....+..+.. .+-..++|+|.|.++..++..+.++ ++.|++...++
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~--~~wdiiit~G~t~~l~~~l~~~~N~-------------gd~vlie~~ty 158 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPY--KNWDIIITNGNTDGLFKVLRTLINR-------------GDHVLIEEYTY 158 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCC--CCceEEEecCCchHHHHHHHHhhcC-------------CCceEEecccc
Confidence 34566667777766655433323334332 1235889999999999999988764 26899999999
Q ss_pred hHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh---------CCeEEE-EeeCCCCcccccCH---HHHHHHHHHh
Q 011057 165 VCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE---------NTICVA-AILGSTLNGEFEDV---KLLNDLLAEK 231 (494)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---------~t~~vv-~~~~~~~tG~~~~l---~~I~~la~~~ 231 (494)
.+-...++.+|+.++.|+.|++ .+++|.|++.+.. ++.+++ +-.+.||||....+ ++|.+||++|
T Consensus 159 ~~AL~s~~a~gv~~ipv~md~~--Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKy 236 (472)
T KOG0634|consen 159 PSALQSMEALGVKIIPVKMDQD--GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKY 236 (472)
T ss_pred hHHHHhccccCceEEeccccCC--CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHc
Confidence 9888888999988888888765 6999999998864 233332 34677899998665 5799999999
Q ss_pred hcccCCCceEEEecccccccccccCCc-----ccc--------------cccCCCceEEEEcCcccCCcCCceEEEEEeC
Q 011057 232 NKETGWDTPIHVDAASGGFIAPFLYPE-----LEW--------------DFRLPLVKSINVSGHKYGLVYAGIGWVIWRN 292 (494)
Q Consensus 232 ~~~~~~~~~l~vD~a~~~~~~~~~~~~-----~~~--------------~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~ 292 (494)
+++++.|+.|.....+-..+. ..+ .+..++-..-.-++.|.+.++.++||+...+
T Consensus 237 ------DfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~ 310 (472)
T KOG0634|consen 237 ------DFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNS 310 (472)
T ss_pred ------CEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCH
Confidence 999999999976443211110 000 1112222222335669998889999986543
Q ss_pred CCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHH----HHHHHHHHHHhh-CCC--eE
Q 011057 293 KEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCH----ENAMVLKEGLEK-TGR--FN 365 (494)
Q Consensus 293 ~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~----~~a~~l~~~L~~-~~~--~~ 365 (494)
. .+... +... .....+ +++..-.-+++.|+..|++|+-+.+.+++ .+++.+.++|.+ +|. ++
T Consensus 311 ~-~l~ri-------l~~a--e~~t~~-pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~ 379 (472)
T KOG0634|consen 311 L-FLKRI-------LDLA--EVATSG-PSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCE 379 (472)
T ss_pred H-HHHHH-------hhhc--ceeecC-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeE
Confidence 2 22221 1110 001111 22334445778888899988877776654 466677777765 443 45
Q ss_pred EeecCCCccEEEEEec-----CCCCCC-H-HHHHHHHHhcCceeecccc----CCCCCCceEEEEEeccCCChHHHHHHH
Q 011057 366 IVSKDEGVPLVAFSLK-----DNKRHD-E-FEVAELLRRFGWIVPAYTM----PADAQHITVLRVVIREDFSRTLAERLV 434 (494)
Q Consensus 366 ~~~~~~~~~~v~f~~~-----~~~~~~-~-~~l~~~L~~~Gi~v~~~~~----~~~~~~~~~lRvs~~~~~t~~~id~~i 434 (494)
+..+. ...++.++++ ..+.++ . +.+...+.++|+.+..... |....+.-++|+++.. ...+ .|.
T Consensus 380 ~~~P~-aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~-a~~e---~l~ 454 (472)
T KOG0634|consen 380 YHPPK-AGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAF-AEPE---KLD 454 (472)
T ss_pred EecCC-cceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeec-CCHH---HHH
Confidence 55443 4445666764 112344 2 3455677889987632221 2112233589999874 2333 444
Q ss_pred HHHHHHHHHHhc
Q 011057 435 LDITKVLHELDS 446 (494)
Q Consensus 435 ~~l~~~~~~l~~ 446 (494)
+.++.+-..+++
T Consensus 455 ~g~~rf~~~ike 466 (472)
T KOG0634|consen 455 EGIERFGSVIKE 466 (472)
T ss_pred HHHHHHHHHHHH
Confidence 555555444443
No 325
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.56 E-value=1.9e-12 Score=125.45 Aligned_cols=285 Identities=20% Similarity=0.116 Sum_probs=184.0
Q ss_pred HHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcch----HHHHHHHHcC
Q 011057 100 CVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQV----CWEKFARYFE 175 (494)
Q Consensus 100 ~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~----s~~~~~~~~G 175 (494)
+.+.++++.|.+. ++.+++|..|+..+++.+... .+.|++....|. -+.+....+|
T Consensus 82 le~~iaal~ga~~-------~l~fsSGmaA~~~al~~L~~~-------------g~~iV~~~~~Y~gT~~~l~~~~~~~g 141 (409)
T KOG0053|consen 82 LESGIAALEGAAH-------ALLFSSGMAAITVALLHLLPA-------------GDHIVATGDVYGGTLRILRKFLPKFG 141 (409)
T ss_pred HHHHHHHHhCCce-------EEEecccHHHHHHHHHHhcCC-------------CCcEEEeCCCcccHHHHHHHHHHHhC
Confidence 4455999999975 788889998988888777431 256776655443 4555666778
Q ss_pred CeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccccccccccc
Q 011057 176 VELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL 255 (494)
Q Consensus 176 ~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (494)
++...++++ |++.+++++.+++++|.+-.|+||+..+.||++|.++||++ |+.++||.+++.++. .
T Consensus 142 ie~~~vd~~------~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~------g~~vvVDnTf~~p~~--~ 207 (409)
T KOG0053|consen 142 GEGDFVDVD------DLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKY------GFLVVVDNTFGSPYN--Q 207 (409)
T ss_pred ceeeeechh------hHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhC------CCEEEEeCCcCcccc--c
Confidence 888888743 56889999999999999999999999999999999999999 999999999998532 2
Q ss_pred CCcccccccCCCceEEEEcCcccCCcCCce--EEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHH
Q 011057 256 YPELEWDFRLPLVKSINVSGHKYGLVYAGI--GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLI 333 (494)
Q Consensus 256 ~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~--G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~ 333 (494)
.+ +. .|+|+++-|..||+.+...+ |.++.+..+.. ..+.....+++.. .....+|..++
T Consensus 208 ~p-L~-----lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~-~~l~~~~~~lg~~------------~~p~~~~ll~R 268 (409)
T KOG0053|consen 208 DP-LP-----LGADIVVHSATKYIGGHSDVIGGSVVLNSEELA-SRLKFLQEDLGWC------------EDPFDLFLLSR 268 (409)
T ss_pred Ch-hh-----cCCCEEEEeeeeeecCCcceeeeEEecCcHHHH-HHHHHHHHHhcCC------------CCHHHHHHHhc
Confidence 22 22 27999999999999877654 55544423222 2121212222221 12233343333
Q ss_pred HhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE-EeecC---------------CCccEEEEEecCCCCCCHHHHHHHHHh
Q 011057 334 RLGFEGYRNVMENCHENAMVLKEGLEKTGRFN-IVSKD---------------EGVPLVAFSLKDNKRHDEFEVAELLRR 397 (494)
Q Consensus 334 ~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~~ 397 (494)
-+ ..+.-++++..+++..+.+.|++.+.++ ++.+. ...+.++|.+... .-.+.++.+.|.=
T Consensus 269 gl--ktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~-~~~a~kf~~~LK~ 345 (409)
T KOG0053|consen 269 GL--KTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGN-EEHAKKFYDALKL 345 (409)
T ss_pred Cc--chhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCC-HHHHHHHHHhhhh
Confidence 33 3334567777788888888888888777 43332 0223345554332 1123445555442
Q ss_pred --cCcee---------eccc---cCCC-----CCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 398 --FGWIV---------PAYT---MPAD-----AQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 398 --~Gi~v---------~~~~---~~~~-----~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
.+..+ ++.. .+.. .-....+|+|++. |+++.+++++.++++.+
T Consensus 346 ~~~a~SlG~~eSL~~~p~~mth~~~~e~~~~~Gi~~~LVRvSVGi----Ed~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 346 FTKAPSLGGNESLAEPPAIMTHASELEEREKFGIDPNLVRVSVGI----EDIEDLIKDFQQALEKA 407 (409)
T ss_pred hhcccCcCccchhhcchhhhccCCCHHHHHhcCCCCCcEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 22111 1111 0100 1124689999984 78888899999888765
No 326
>PRK12403 putative aminotransferase; Provisional
Probab=99.55 E-value=9.1e-12 Score=127.85 Aligned_cols=353 Identities=14% Similarity=0.042 Sum_probs=195.3
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++.............+...++.++|+++++.+. ..+.++++|+|
T Consensus 52 dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGse 126 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHY-----SHAIYTNSGSE 126 (460)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHH
Confidence 56666544332 2334578999999888876332211112234455567777888876321 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCCe-----------eEEEeccCC---ccc----
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEVE-----------LKEVKLSEG---YYV---- 189 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~~-----------v~~v~~~~~---~~~---- 189 (494)
|+..|++.++..+... |.. .+..|+ .....|.+...++...|.. +..+|.... .+.
T Consensus 127 A~e~AiklAr~~~~~~----g~~-~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 201 (460)
T PRK12403 127 ANEVLIRTVRRYWQVL----GKP-QKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPA 201 (460)
T ss_pred HHHHHHHHHHHHHHhh----CCC-CCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChH
Confidence 9999999997643211 110 112333 2445687765555544432 223321100 000
Q ss_pred ----cCHHHHHHhhhh----CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCC
Q 011057 190 ----MDPVKAVEMVDE----NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYP 257 (494)
Q Consensus 190 ----~d~~~L~~~i~~----~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~ 257 (494)
.++++|++.+.+ +..+|++--.....|.+.| +++|.++|++| |+++++|+++.++-- ...
T Consensus 202 ~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~------g~lLI~DEV~tGfGR--tG~ 273 (460)
T PRK12403 202 EFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY------DVLLCADEVIGGFGR--TGE 273 (460)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--Cch
Confidence 113556655532 2344554444445578777 99999999999 999999999976421 111
Q ss_pred ccc-ccccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCccccccccc-CCCCCCCCCcccccCcchHHHHHHHHHHHH
Q 011057 258 ELE-WDFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHI-NYLGADQPTFTLNFSKGSSQVIAQYYQLIR 334 (494)
Q Consensus 258 ~~~-~~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~-~y~~~~~~~~~~~~s~~~~~~~a~~~al~~ 334 (494)
... ..+++ ..|.++ .-|.+.++. .+|.++++++ .. +.+.... .+.. ..+ +..++....+..++|+.
T Consensus 274 ~~a~e~~gv-~PDiv~--~gK~lggG~~Piga~v~~~~-i~-~~~~~~~~~~~~----~~T--~~gnPl~~Aaala~L~~ 342 (460)
T PRK12403 274 WFAHEHFGF-EPDTLS--IAKGLTSGYVPMGGLVLSKR-IA-EALVEQGGVFAH----GLT--YSGHPVAAAVAIANLKA 342 (460)
T ss_pred hhhhhhcCC-CCCeEE--EcccccccccceEEEEECHH-HH-HHHhcCCCcccc----CCC--CCCCHHHHHHHHHHHHH
Confidence 111 12233 258776 458776653 5677776542 21 2111110 0110 111 22334556667777777
Q ss_pred hcHhHHHHHHHHHH-HHHHHHHHHHhhCC-CeEEeecCC-CccEEEEEecCCCC----CC-----HHHHHHHHHhcCcee
Q 011057 335 LGFEGYRNVMENCH-ENAMVLKEGLEKTG-RFNIVSKDE-GVPLVAFSLKDNKR----HD-----EFEVAELLRRFGWIV 402 (494)
Q Consensus 335 l~~~g~~~~~~~~~-~~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~~----~~-----~~~l~~~L~~~Gi~v 402 (494)
+.+++ ..++.. ++.++|++.|+++- ...++..-. ...+..+.+..... .. ...+.+.+.++|+++
T Consensus 343 i~~~~---l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~ 419 (460)
T PRK12403 343 LRDEG---VVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVII 419 (460)
T ss_pred HHhcc---HHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEE
Confidence 76554 355554 66677777665431 122222211 23455666532110 01 223556678899986
Q ss_pred eccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 403 PAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 403 ~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
.. .+ ..+|++-...+|++++|.+++.|+++++++.
T Consensus 420 ~~-------~~-~~~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 420 RS-------TL-GRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred Ee-------cC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 32 11 2367766556699999999999999998874
No 327
>PRK06062 hypothetical protein; Provisional
Probab=99.55 E-value=1.1e-11 Score=126.95 Aligned_cols=345 Identities=13% Similarity=0.036 Sum_probs=197.6
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++........ ...+...++.+.|+++...+. ..+.|+++|+|
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGsE 123 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPA--HANDARSEAARLIAERAPGDL-----SKVFFTNGGAD 123 (451)
T ss_pred CCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCc--cCCHHHHHHHHHHHHhCCCCC-----CEEEEcCChHH
Confidence 56666544443 23356788999998887753221111 223444557777888764321 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC-----------eeEEEeccCCccc------c
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV-----------ELKEVKLSEGYYV------M 190 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~-----------~v~~v~~~~~~~~------~ 190 (494)
|+..|++.++... | +.+|+ .....|....-+....|. .+..++... .+. .
T Consensus 124 Ave~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~ 191 (451)
T PRK06062 124 ANEHAVRMARLHT-------G----RPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPF-LYRSEFHATT 191 (451)
T ss_pred HHHHHHHHHHHhh-------C----CceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCC-ccccccCCCC
Confidence 9999999997641 1 23454 444567654444333221 122222211 011 1
Q ss_pred C-------HHHHHHhhhh----CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEeccccccccccc
Q 011057 191 D-------PVKAVEMVDE----NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL 255 (494)
Q Consensus 191 d-------~~~L~~~i~~----~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (494)
| ++.|++.++. +..+|++--.....|.+.| +++|.++|+++ |+++++|+++.++.- .
T Consensus 192 ~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~------g~lLI~DEV~tGfGR--t 263 (451)
T PRK06062 192 EEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRH------GIVLIADEVMAGFGR--T 263 (451)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc------CCEEEeeccccCCCc--C
Confidence 2 5777887752 2345554444445588878 99999999999 999999999986421 1
Q ss_pred CCccc-ccccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHH
Q 011057 256 YPELE-WDFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLI 333 (494)
Q Consensus 256 ~~~~~-~~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~ 333 (494)
..... ..+++ ..|.+++ -|.+.++. .+|.++.+++ .. +.+.. ..+. ...+ ++.++....+..++|+
T Consensus 264 G~~~a~~~~gv-~PDi~t~--gK~lggG~~Pigav~~~~~-i~-~~~~~-~~~~----~~~T--~~gnpl~~Aaa~a~L~ 331 (451)
T PRK06062 264 GKWFAIEHFGV-VPDLITF--AKGVNSGYVPLGGVAISEA-IA-ATFAD-RPYP----GGLT--YSGHPLACAAAVATIN 331 (451)
T ss_pred cHHHHHHhcCC-CCCeeee--chhhhcCCcCcEEEEEcHH-HH-HHhcc-CCCC----CCCC--CCCCHHHHHHHHHHHH
Confidence 11101 11233 4687764 48776653 4677776652 22 22110 0111 1112 2223455566677777
Q ss_pred HhcHhHHHHHHHHHHHHH-HHHHHHHhhCC-CeEEeecCC-CccEEEEEecCCC----CC--------CHHHHHHHHHhc
Q 011057 334 RLGFEGYRNVMENCHENA-MVLKEGLEKTG-RFNIVSKDE-GVPLVAFSLKDNK----RH--------DEFEVAELLRRF 398 (494)
Q Consensus 334 ~l~~~g~~~~~~~~~~~a-~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~----~~--------~~~~l~~~L~~~ 398 (494)
.+.++. ..++..++. .+|++.|+++- .+.++..-. ...++.+.+.... .. -...+.+.|.++
T Consensus 332 ~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 408 (451)
T PRK06062 332 AMEEEG---IVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKER 408 (451)
T ss_pred HHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHC
Confidence 776554 455555555 46666665541 121111111 2335556553210 00 134788899999
Q ss_pred CceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhcC
Q 011057 399 GWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSL 447 (494)
Q Consensus 399 Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~~ 447 (494)
|+++.. + ...+|++....+|+++||.+++.++++++.++..
T Consensus 409 Gvl~~~---~-----~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~~~ 449 (451)
T PRK06062 409 GLLPFV---N-----GNRIHVVPPCTVTEDEVREGLAILDAALAVADAA 449 (451)
T ss_pred CcEEee---c-----CCEEEEECCccCCHHHHHHHHHHHHHHHHHhhhc
Confidence 998532 1 2368998877889999999999999999887653
No 328
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.55 E-value=2e-11 Score=124.48 Aligned_cols=348 Identities=11% Similarity=0.013 Sum_probs=195.1
Q ss_pred hcCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceee-ecCh
Q 011057 52 LDGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVG-TVGS 126 (494)
Q Consensus 52 ~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~gg 126 (494)
.+|+.++.+.++ .-.+.+|.+.+++.+.++....... .........++.+.|++++..+... .....| +++|
T Consensus 36 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~~lae~l~~~~~~~~~~--~~~~~f~~~sG 112 (425)
T PRK09264 36 EDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHG-LDMHTTAKREFLETFEETILKPRGL--DYKVQFTGPTG 112 (425)
T ss_pred CCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccc-cccCcHHHHHHHHHHHHhhcCCcCC--CceEEEeCCCH
Confidence 356666544443 2335678999999888765222111 1112234445667777765332110 012445 4799
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcC---------C---eeEEEeccCC-cc-ccC
Q 011057 127 SEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFE---------V---ELKEVKLSEG-YY-VMD 191 (494)
Q Consensus 127 t~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G---------~---~v~~v~~~~~-~~-~~d 191 (494)
+||+..|++.++.. .| +.+|+ +....|....-+....| . .+..+|.... .. .-|
T Consensus 113 seA~e~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (425)
T PRK09264 113 TNAVEAALKLARKV-------TG----RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDT 181 (425)
T ss_pred HHHHHHHHHHHHHh-------cC----CCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhH
Confidence 99999999999753 11 24454 45556764433333222 1 2344554210 00 136
Q ss_pred HHHHHHhhhh------CCeEEEEeeCCCCcccc----cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc
Q 011057 192 PVKAVEMVDE------NTICVAAILGSTLNGEF----EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW 261 (494)
Q Consensus 192 ~~~L~~~i~~------~t~~vv~~~~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (494)
+++|++.+.+ +..+|++--.....|.+ +.+++|.++|++| |+++++|+++.++.- .......
T Consensus 182 ~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEV~tG~Gr--tG~~~~~ 253 (425)
T PRK09264 182 LAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKH------DILLIVDDIQAGCGR--TGTFFSF 253 (425)
T ss_pred HHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc------CcEEEEechhhCCcc--ccHHHHH
Confidence 7888888853 23445444444444654 3589999999999 999999999976411 1110011
Q ss_pred -cccCCCceEEEEcCcccCCc-CCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH-HHhcHh
Q 011057 262 -DFRLPLVKSINVSGHKYGLV-YAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL-IRLGFE 338 (494)
Q Consensus 262 -~~~~~~~D~~~~~~hK~l~~-p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al-~~l~~~ 338 (494)
.+++ ..|.++++ |.+.+ +..+|+++++++ +. .+ ..... ..++ +.++...++..+++ ..+..+
T Consensus 254 ~~~~v-~PDi~t~~--K~l~~~G~pigav~~~~~--i~-~~--~~~~~-----~~T~--~gnp~~~aaa~a~l~~~~~~~ 318 (425)
T PRK09264 254 ERAGI-TPDIVTLS--KSISGYGLPMALVLIKPE--LD-VW--KPGEH-----NGTF--RGNNLAFVTATAALEEYWSDD 318 (425)
T ss_pred hhcCC-CCCEEEec--cccCCCccceEEEEEchh--hh-cc--CCCcc-----CCCC--CCCHHHHHHHHHHHHHHHhhh
Confidence 1122 35777654 87755 555688887653 21 11 11000 1111 12223344455555 333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCC-eE-EeecCC-CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCce
Q 011057 339 GYRNVMENCHENAMVLKEGLEKTGR-FN-IVSKDE-GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHIT 415 (494)
Q Consensus 339 g~~~~~~~~~~~a~~l~~~L~~~~~-~~-~~~~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~ 415 (494)
+..++..++.++|+++|+++.. +. +..+.. ...++.+.+.. ......+.+.+.++|+++... .....
T Consensus 319 ---~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~--~~~~~~l~~~~~~~Gv~~~~~-----~~~~~ 388 (425)
T PRK09264 319 ---AFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGD--GELAGKIAAEAFENGLIIETS-----GPEDE 388 (425)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecC--hHHHHHHHHHHHHCCCEEecc-----CCCCC
Confidence 4566777777788877765421 21 111111 23455677643 223567889999999986431 11235
Q ss_pred EEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 416 VLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 416 ~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
.+|++....+|+++++.+++.|+++++++.+
T Consensus 389 ~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~ 419 (425)
T PRK09264 389 VVKLLPPLTIDEEELEEGLDILEEAVAEVLA 419 (425)
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 7888887789999999999999999987644
No 329
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.55 E-value=8e-12 Score=127.22 Aligned_cols=348 Identities=12% Similarity=0.026 Sum_probs=198.0
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++........ ........++.++|+++++.+- ..+.++++|++
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~~~~-----~~v~f~~sGse 116 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFG-GFTHKPAIELCQKLVKMTPNAL-----DCVFLADSGSV 116 (427)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccc-ccCCHHHHHHHHHHHhhCCCCC-----CEEEEeCCcHH
Confidence 46665554442 22356788999998888763321111 0111223446777888764321 35899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeE-EeCCCcchHHHHHHHHcCCe-------------eEEEeccCCcc-----c
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNI-VTGANVQVCWEKFARYFEVE-------------LKEVKLSEGYY-----V 189 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~v-i~~~~~h~s~~~~~~~~G~~-------------v~~v~~~~~~~-----~ 189 (494)
|+..+++.++..+..+ |.. .+.+| .+....|....-+....|.. +..++.....+ .
T Consensus 117 A~e~AlklAr~~~~~~----~~~-~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 191 (427)
T TIGR00508 117 AVEVALKMALQYWQAK----GEK-NRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNE 191 (427)
T ss_pred HHHHHHHHHHHHHHhh----CCC-CccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHH
Confidence 9999999988754221 110 12344 45666776443333322211 11222111001 1
Q ss_pred cCHHHHHHhhhh--CCeEEEEeeCC-CCcc-----cccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc
Q 011057 190 MDPVKAVEMVDE--NTICVAAILGS-TLNG-----EFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW 261 (494)
Q Consensus 190 ~d~~~L~~~i~~--~t~~vv~~~~~-~~tG-----~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (494)
-|++++++.+.. +..+.+++.|- ...| ....+++|.++|++| ++++++|+++.++.. .......
T Consensus 192 ~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~------~~llI~DEv~tG~Gr--~G~~~~~ 263 (427)
T TIGR00508 192 EAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQY------DILLIADEIATGFGR--TGKLFAC 263 (427)
T ss_pred HHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CCccchh
Confidence 256777777753 23444555553 3444 336799999999999 999999999955311 1111111
Q ss_pred -cccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccccccc--cCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH
Q 011057 262 -DFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFH--INYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF 337 (494)
Q Consensus 262 -~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~--~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~ 337 (494)
.+++ ..|.+++ .|.+.++. .++.++.+++ .. +.+... ..+.. ..+ +..++....+..++|+.+..
T Consensus 264 ~~~~v-~pDi~~~--gK~l~gG~~p~~a~~~~~~-~~-~~~~~~~~~~~~~----~~T--~~g~p~~~aaa~a~l~~l~~ 332 (427)
T TIGR00508 264 EHAGV-VPDILCV--GKALTGGYMTLSATVTTDK-VA-QTISSGEAGCFMH----GPT--FMGNPLACAVAEASLAILLE 332 (427)
T ss_pred hhcCC-CCCEEEe--chhhhcCcccceEEEEcHH-HH-HHHhcCCCCcccc----CCC--CCcCHHHHHHHHHHHHHHHh
Confidence 1222 4677764 58775442 3455554432 11 111110 01110 011 11234555666677777655
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC-CCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceE
Q 011057 338 EGYRNVMENCHENAMVLKEGLEKTGRFNIVSKD-EGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITV 416 (494)
Q Consensus 338 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~ 416 (494)
+ +..++..++.++|++.|+++.....+... ....++.+.+.. ..+...+.++|.++|+++... + ..
T Consensus 333 ~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~--~~~~~~~~~~l~~~Gv~~~~~-------~-~~ 399 (427)
T TIGR00508 333 G---EWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYK--PVNVEELQKKFVEQGVWIRPF-------G-KL 399 (427)
T ss_pred C---CHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECC--ccCHHHHHHHHHHCCeEEEec-------C-CE
Confidence 4 34678888899999999887522222211 134567777743 234678999999999987431 1 35
Q ss_pred EEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 417 LRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 417 lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
+|++....+|.+|||.+++.|++++.+
T Consensus 400 l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 400 IYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 888877779999999999999988753
No 330
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.55 E-value=2.1e-11 Score=123.73 Aligned_cols=342 Identities=10% Similarity=0.004 Sum_probs=194.4
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceee-ecChh
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVG-TVGSS 127 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~ggt 127 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.+++...... .....+...++.++|++++..+... . ....| +++|+
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~~lae~l~~~~~~~~~~-~-~~~~f~~~sGs 109 (412)
T TIGR02407 33 DGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHS-LDMATEAKREFLETFNEIILKPRGL-D-YKVQFPGPTGT 109 (412)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceec-cccCcHHHHHHHHHHHHhccCccCC-C-ceEEEeCCCch
Confidence 45555544332 2335679999999888765222111 1122344455677787765322100 0 12445 48999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCC-c-cccCH
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEG-Y-YVMDP 192 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~-~-~~~d~ 192 (494)
||+..|++.++.. .| +.+|+ .....|....-+....|. .+..+|..+- . ..-++
T Consensus 110 eA~e~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 178 (412)
T TIGR02407 110 NAVESALKLARKV-------TG----RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTI 178 (412)
T ss_pred HHHHHHHHHHhhh-------cC----CCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHH
Confidence 9999999999753 11 24455 455677655444433221 2233443210 0 01246
Q ss_pred HHHHHhhhh------CCeEEEEeeCCCCcccc----cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccc
Q 011057 193 VKAVEMVDE------NTICVAAILGSTLNGEF----EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWD 262 (494)
Q Consensus 193 ~~L~~~i~~------~t~~vv~~~~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~ 262 (494)
+.+++.+++ ++.+|++--...+.|.+ +-+++|.++|++| |+++++|+++.++.- .......+
T Consensus 179 ~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEV~tG~GR--tG~~~a~~ 250 (412)
T TIGR02407 179 AYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRH------DILLIVDDIQAGCGR--TGTFFSFE 250 (412)
T ss_pred HHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--cchhHHhc
Confidence 778888863 34556554444556764 2378999999999 999999999975411 11100111
Q ss_pred -ccCCCceEEEEcCcccCCc-CCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHH-hcHhH
Q 011057 263 -FRLPLVKSINVSGHKYGLV-YAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIR-LGFEG 339 (494)
Q Consensus 263 -~~~~~~D~~~~~~hK~l~~-p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~-l~~~g 339 (494)
.++ ..|.++++ |++.+ +..+|++++++.. ..+. ... ...+ ++.++...++..++++. +.++
T Consensus 251 ~~~v-~PDi~~~~--K~lg~~G~pigav~~~~~~---~~~~--~~~-----~~~T--~~gnpl~~aaa~a~l~~~i~~~- 314 (412)
T TIGR02407 251 PAGI-EPDIVCLS--KSISGYGLPLALTLIKPEL---DVWK--PGE-----HNGT--FRGNNLAFVTATAALEYYWSDD- 314 (412)
T ss_pred ccCC-CCCEEEec--hhccCCccceeEEEEchhh---hccC--CCc-----cCCC--CCccHHHHHHHHHHHHHHhccc-
Confidence 122 46777654 99876 6668999886541 1111 000 0111 12222334445666764 5443
Q ss_pred HHHHHHHHHHHHHHHHHHHhh----CCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCce
Q 011057 340 YRNVMENCHENAMVLKEGLEK----TGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHIT 415 (494)
Q Consensus 340 ~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~ 415 (494)
+..++..++.++|+++|++ .+++. ........++.+.+... .....+.+.+.++|+++... .....
T Consensus 315 --~l~~~~~~~g~~l~~~l~~l~~~~~~~~-~~vrg~Gl~~~l~l~~~--~~~~~~~~~~~~~Gv~v~~~-----~~~~~ 384 (412)
T TIGR02407 315 --AFEKAVQRKSEIIQERLDRIVAEYPELI-KQVRGRGLMQGIECGDG--DLAGKIAKAAFENGLIIETS-----GPNDE 384 (412)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhhCCCce-EeeecceeEEEEEecCh--HHHHHHHHHHHHCCCEEecc-----CCCCC
Confidence 3455566666666666654 33221 11111344567777432 23567889999999987431 11235
Q ss_pred EEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 416 VLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 416 ~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
.+|++....+|.++++.+++.|+++++
T Consensus 385 ~lr~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 385 VIKLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 799999999999999999999998875
No 331
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.55 E-value=6.8e-12 Score=114.54 Aligned_cols=361 Identities=16% Similarity=0.150 Sum_probs=200.0
Q ss_pred HHHHHHHHHHhhhhcCCCCCcccccccCCChHHH----HHHHHHHhcc-----cCCCCCCChhhHHHHHHHHHHHHHHhC
Q 011057 39 KEAAYQIINDELMLDGNPRLNLASFVTTWMEPEC----DKLMMAAINK-----NYVDMDEYPVTTELQNRCVNIIARLFN 109 (494)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~~~~~~-----~~~~~~~~~~~~~le~~~~~~la~l~g 109 (494)
...+++++.+-+.-.+ ..+++++.+.. -|++ .+...+.+.+ ...+|+..++...+.+.+.+++.+-+|
T Consensus 16 i~~lMdDl~d~Lrt~g--~imLggGNPa~-iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~yg 92 (417)
T COG3977 16 ITQLMDDLNDGLRTPG--AIMLGGGNPAR-IPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYG 92 (417)
T ss_pred HHHHHHHHHhhccCCC--ceeeCCCCccc-ChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhC
Confidence 3445555555443222 23455554433 3443 3333333332 345688888999999999999999999
Q ss_pred CCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeC-CCcchHHHHHHHHcCCe---eEE----E
Q 011057 110 APLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTG-ANVQVCWEKFARYFEVE---LKE----V 181 (494)
Q Consensus 110 ~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~-~~~h~s~~~~~~~~G~~---v~~----v 181 (494)
+.-.. ..+..|+|+..+.+++.-....+. ..| ....|+.| ++.+-.+..+ |++ .+. +
T Consensus 93 wnit~---~NIalTnGSQs~fFYlfNlF~G~~-----sdG---~~k~illPLaPeYiGY~d~----~l~~d~fVs~kP~i 157 (417)
T COG3977 93 WNITA---QNIALTNGSQSAFFYLFNLFAGRR-----SDG---TEKKILLPLAPEYIGYADA----GLEEDLFVSAKPNI 157 (417)
T ss_pred CCCcc---ceeeecCCccchHHHHHHHhcCcc-----CCC---cceeEeeccChhhcccccc----ccCccceeeccCCc
Confidence 98632 458889999888887766553221 011 12355554 2333323222 111 111 1
Q ss_pred eccC-C--ccccCHHHHHHhhhhCCeEEEEeeCCCCcccc---cCHHHHHHHHHHhhcccCCCceEEEeccccccccccc
Q 011057 182 KLSE-G--YYVMDPVKAVEMVDENTICVAAILGSTLNGEF---EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL 255 (494)
Q Consensus 182 ~~~~-~--~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (494)
...+ + .+++|.++|. +.+.+-+|+++-|+||||.+ +.+.+|..+|++| |+++++|.|||. ||.
T Consensus 158 el~~~g~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~------giPliIDnAYg~---PFP 226 (417)
T COG3977 158 ELLPAGQFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQH------GIPLIIDNAYGV---PFP 226 (417)
T ss_pred ccccccceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhc------CCcEEEecccCC---CCC
Confidence 1111 1 2578888774 45678899999999999998 4578888899999 999999999987 332
Q ss_pred C---CcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHH-HH--
Q 011057 256 Y---PELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIA-QY-- 329 (494)
Q Consensus 256 ~---~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a-~~-- 329 (494)
. .+....++ .=-..++|..|.+.++.+||+++...+ .+ ..+.. + .....+..++-+..+++ +.
T Consensus 227 ~iifsd~~~~w~--~NiilC~SLSK~GLPG~R~GIiIane~-vi-qaitn----m---n~iisLap~~~G~Aia~~mie~ 295 (417)
T COG3977 227 GIIFSDATPLWN--ENIILCMSLSKLGLPGSRCGIIIANEK-VI-QAITN----M---NGIISLAPGRMGPAIAAEMIES 295 (417)
T ss_pred ceecccccccCC--CCEEEEeehhhcCCCCcceeEEEccHH-HH-HHHHh----c---cceeeecCCCccHHHHHHHhhc
Confidence 1 11111111 124567788999999999999886543 22 11111 0 01111112222222211 11
Q ss_pred HHHHHhcHhHHHHHH-HHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceee-cc-c
Q 011057 330 YQLIRLGFEGYRNVM-ENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVP-AY-T 406 (494)
Q Consensus 330 ~al~~l~~~g~~~~~-~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~-~~-~ 406 (494)
..|..+.++-++--. ++....-..|+..|-+.+ +.+..+ ...++.|---..-.++..+++++|.++|+++. +. .
T Consensus 296 gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~-~~iHkp--EGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~F 372 (417)
T COG3977 296 GDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYR-CLIHKP--EGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYF 372 (417)
T ss_pred chHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccc-eeeecC--CcceeehhhhccCCCCHHHHHHHHHhCeEEEeccccc
Confidence 112223333222222 222223334555555444 444433 34555533212235788999999999998863 22 2
Q ss_pred cCCC---C-CCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 407 MPAD---A-QHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 407 ~~~~---~-~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
+|+- + ....|+|++... ..+.|+.-++.|.+.++++
T Consensus 373 FpGl~~ewpH~hqC~Rmn~~~--~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 373 FPGLDKEWPHTHQCMRMNYVP--EPEKIEKGVAILAEEVERA 412 (417)
T ss_pred CCCCCCCCCCccceEEEecCC--CHHHHHHHHHHHHHHHHHH
Confidence 2321 1 235799998765 5667776666666655544
No 332
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.54 E-value=2.3e-11 Score=123.78 Aligned_cols=345 Identities=12% Similarity=-0.001 Sum_probs=197.3
Q ss_pred hcCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++ ...+.+|.+.+++.+.++..... .......+.+.++.+.|++++.... .....|+++|+
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~-~~~~~~~~~~~~la~~l~~~~p~~~----~~~~~f~~sGs 111 (421)
T PRK09792 37 VEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHT-AYQIVPYESYVTLAEKINALAPVSG----QAKTAFFTTGA 111 (421)
T ss_pred CCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCc-ccCccCCHHHHHHHHHHHHhCCCCC----CceEEEeCChH
Confidence 356655544332 23356788999998888753221 1111123344457777888764321 12488999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC-------------eeEEEeccCCcccc---
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLSEGYYVM--- 190 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~~--- 190 (494)
||+..|++.++.. .| +++|+ .....|....-+....|. .+..+|...+...+
T Consensus 112 eA~e~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~ 180 (421)
T PRK09792 112 EAVENAVKIARAH-------TG----RPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQ 180 (421)
T ss_pred HHHHHHHHHHHHh-------cC----CCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHH
Confidence 9999999999753 12 24554 455577644333333221 13334432210012
Q ss_pred -CHHHHHHhhhh-----CCeEEEEeeCCCCccccc-C---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc
Q 011057 191 -DPVKAVEMVDE-----NTICVAAILGSTLNGEFE-D---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE 260 (494)
Q Consensus 191 -d~~~L~~~i~~-----~t~~vv~~~~~~~tG~~~-~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~ 260 (494)
+++.+++.+.. +..+|++.-..+++|... | +++|.++|++| ++++++|+++.++.. ......
T Consensus 181 ~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tg~gr--~G~~~a 252 (421)
T PRK09792 181 DSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEH------GIVMIADEVQSGFAR--TGKLFA 252 (421)
T ss_pred HHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCC--CCchhH
Confidence 34778887752 345666665666778653 5 89999999999 999999999987521 111111
Q ss_pred c-cccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhH
Q 011057 261 W-DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEG 339 (494)
Q Consensus 261 ~-~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g 339 (494)
. .++ ...|.++ ..|.+.++..+|+++.+++ .. +.+. .. ....++ ..++....+..+.++.+.++
T Consensus 253 ~~~~~-~~pDi~t--~gK~l~~G~pigav~~~~~-i~-~~~~---~~----~~~~T~--~gnpl~~aaa~a~l~~l~~~- 317 (421)
T PRK09792 253 MDHYA-DKPDLMT--MAKSLAGGMPLSGVVGNAN-IM-DAPA---PG----GLGGTY--AGNPLAVAAAHAVLNIIDKE- 317 (421)
T ss_pred HHhcC-CCCcEEE--eehhhcCCCceEEEEEcHH-HH-hccC---CC----CcCCCC--CCCHHHHHHHHHHHHHHHhh-
Confidence 1 111 2457554 4588877788899877543 21 1111 00 001121 22223444455666666544
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCC-CeEEeecCC-CccEEEEEecCCCC-----CCHHHHHHHHHhcCceeeccccCCCCC
Q 011057 340 YRNVMENCHENAMVLKEGLEKTG-RFNIVSKDE-GVPLVAFSLKDNKR-----HDEFEVAELLRRFGWIVPAYTMPADAQ 412 (494)
Q Consensus 340 ~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~~-----~~~~~l~~~L~~~Gi~v~~~~~~~~~~ 412 (494)
+..++..++.+++.+.|+++- .+..+.... ...++.+.+..... .....+.+.+.++|+++. +. ..
T Consensus 318 --~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~----~~-g~ 390 (421)
T PRK09792 318 --SLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLL----TC-GA 390 (421)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEe----ec-CC
Confidence 345566666677777665531 111122222 24566677743211 124678889999999873 11 11
Q ss_pred CceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 413 HITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 413 ~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
...++|+.....++.++++.+++.|++++.
T Consensus 391 ~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 391 YGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred CCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 246799988777899999999988888764
No 333
>PRK07482 hypothetical protein; Provisional
Probab=99.54 E-value=2.4e-11 Score=124.82 Aligned_cols=358 Identities=15% Similarity=0.027 Sum_probs=196.8
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASFV----TTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++. -.+.+|.+.+++.+.++.............+.+.++.+.|++++..+. ..+.|+++|||
T Consensus 48 dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~sGSE 122 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGM-----SKVYYGLSGSD 122 (461)
T ss_pred CCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCchHH
Confidence 566665444432 235678999999988876421111111223445567777888764221 24889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEe-CCCcchHHHHHHHHcCC------------eeEEEeccCC-c-------
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLSEG-Y------- 187 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~------------~v~~v~~~~~-~------- 187 (494)
|+..|++.++..+..+ |.. .+.+||. ....|....-+....|. .+..++.... .
T Consensus 123 Ave~AlKlAr~~~~~~----g~~-~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 197 (461)
T PRK07482 123 ANETQIKLVWYYNNVL----GRP-EKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMS 197 (461)
T ss_pred HHHHHHHHHHHHHHhc----CCC-CCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCC
Confidence 9999999997643211 111 1245554 45567543222222211 1233322110 0
Q ss_pred ----cccCHHHHHHhhh----hCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEeccccccccccc
Q 011057 188 ----YVMDPVKAVEMVD----ENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL 255 (494)
Q Consensus 188 ----~~~d~~~L~~~i~----~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (494)
..-+++.|++.+. ++..+|++--.....|.+.| +++|.++|++| |+++++|+++.++.- .
T Consensus 198 ~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~------giLlI~DEV~tGfGR--t 269 (461)
T PRK07482 198 EEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKY------DILLIADEVVTGFGR--L 269 (461)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEeccccCCCc--C
Confidence 0114577787774 22445554433334465522 78999999999 999999999977521 1
Q ss_pred CCcccc-cccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHH
Q 011057 256 YPELEW-DFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLI 333 (494)
Q Consensus 256 ~~~~~~-~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~ 333 (494)
...... .+++ ..|.+++ -|.+.++. .+|.++.+++ .. +.+.......+...-..| ++.++....+..++|+
T Consensus 270 G~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~h~~T--~~gnpl~~Aaa~a~L~ 342 (461)
T PRK07482 270 GSMFGSDHYGI-EPDLITV--AKGLTSAYAPLSGSIVGEK-VW-DVLEQGSDEHGAIGHGWT--YSGHPICAAAALANLD 342 (461)
T ss_pred cchhhHHhcCC-CCCEEEE--ccccccCccccceeeecHH-HH-HHHhcccccCCccccCCC--CCcCHHHHHHHHHHHH
Confidence 111111 1222 4788875 48876653 5677776543 21 111111000000000112 2233355566667777
Q ss_pred HhcHhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEeecC-CCccEEEEEecCCC----CCC-----HHHHHHHHHhcCcee
Q 011057 334 RLGFEGYRNVMENCHENAMVLKEGLEKTG-RFNIVSKD-EGVPLVAFSLKDNK----RHD-----EFEVAELLRRFGWIV 402 (494)
Q Consensus 334 ~l~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~-~~~~~v~f~~~~~~----~~~-----~~~l~~~L~~~Gi~v 402 (494)
.+.+++ ..++..++.++|.+.|+++- ...++..- ....++.+.+.... ..+ ...+.+.+.++|+++
T Consensus 343 ~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~ 419 (461)
T PRK07482 343 ILEREN---LVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIA 419 (461)
T ss_pred HHHhCC---HHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEE
Confidence 776654 45556677777777776431 11111111 13345566663211 011 246888899999886
Q ss_pred eccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 403 PAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 403 ~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
.. .+ +...+|+.....+|++|++.+++.|+++++++
T Consensus 420 ~~--~~----~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 420 RA--MP----HGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred ec--CC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 32 11 13568888777889999999999999999876
No 334
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.54 E-value=5.2e-11 Score=121.14 Aligned_cols=348 Identities=12% Similarity=0.012 Sum_probs=195.3
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.+++..... ......+...++.+.|++++.-+. ...+.|+++|+|
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~-~~~~~~~~~~~la~~l~~~~p~~~----~~~v~f~~SGse 112 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTC-HQVVPYENYVRLAERLNALVPGDF----AKKTIFVTTGAE 112 (425)
T ss_pred CCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcc-cCccCCHHHHHHHHHHHHhCCCCC----CCEEEECCchHH
Confidence 56666544443 234567899999988887632211 111223334457777888764321 024899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC-------------eeEEEeccCCccccC---
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLSEGYYVMD--- 191 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~~d--- 191 (494)
|+..|++.++.. .| +++|+ .....|....-+....|. .+..+|...+...++
T Consensus 113 A~e~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 181 (425)
T PRK07495 113 AVENAVKIARAA-------TG----RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQ 181 (425)
T ss_pred HHHHHHHHHHHh-------hC----CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHH
Confidence 999999999753 12 23455 455667644333222221 234455432111122
Q ss_pred -HHHHHHhhhh-----CCeEEEEeeCCCCccccc----CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc
Q 011057 192 -PVKAVEMVDE-----NTICVAAILGSTLNGEFE----DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW 261 (494)
Q Consensus 192 -~~~L~~~i~~-----~t~~vv~~~~~~~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (494)
++++++.+.. +..+|++.-....+|.+. -+++|.++|++| |+++++|+++.++.. .......
T Consensus 182 ~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~tG~gr--~G~~~a~ 253 (425)
T PRK07495 182 SLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQH------GILLIADEVQTGFAR--TGKLFAM 253 (425)
T ss_pred HHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhcCCc--CCCceee
Confidence 4455666642 244454443333456442 288999999999 999999999976421 1111111
Q ss_pred -cccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHH
Q 011057 262 -DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGY 340 (494)
Q Consensus 262 -~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~ 340 (494)
.+++ ..|.+++ .|.+.++..+|+++.+.+ .. +.+. ... ...+ +..++....+..++++.+..+
T Consensus 254 ~~~gv-~pDi~tl--sK~l~~G~pigav~~~~~-i~-~~~~--~~~-----~~~T--~~~~pl~~aaa~a~l~~l~~~-- 317 (425)
T PRK07495 254 EHHEV-AADLTTM--AKGLAGGFPLAAVTGRAE-IM-DAPG--PGG-----LGGT--YGGNPLGIAAAHAVLDVIEEE-- 317 (425)
T ss_pred cccCC-CCCEEee--hhhhcCCccceEEEEcHH-HH-hccC--CCC-----cCCC--CCCCHHHHHHHHHHHHHHHhc--
Confidence 1111 3566554 588776677888887543 21 1111 000 1112 222234445555677777554
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCC-eEEeecC-CCccEEEEEecCCCC--CC---HHHHHHHHHhcCceeeccccCCCCCC
Q 011057 341 RNVMENCHENAMVLKEGLEKTGR-FNIVSKD-EGVPLVAFSLKDNKR--HD---EFEVAELLRRFGWIVPAYTMPADAQH 413 (494)
Q Consensus 341 ~~~~~~~~~~a~~l~~~L~~~~~-~~~~~~~-~~~~~v~f~~~~~~~--~~---~~~l~~~L~~~Gi~v~~~~~~~~~~~ 413 (494)
+..++..++.++|+++|+++-. +..+..- ...-++.+.+..... -+ ...+.+.+.++|+++... . .+
T Consensus 318 -~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~-g----~~ 391 (425)
T PRK07495 318 -DLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTC-G----VH 391 (425)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeec-C----CC
Confidence 3556666777777777765421 1111111 123455566643211 01 346788888999986331 1 12
Q ss_pred ceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 414 ITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 414 ~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
..++|+.-...+|++++|.+++.|++++++++.
T Consensus 392 ~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~~ 424 (425)
T PRK07495 392 GNVIRFLAPITIQDDVFAEALDILEASILEASA 424 (425)
T ss_pred CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 357999877788999999999999999987653
No 335
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.54 E-value=7.3e-12 Score=127.13 Aligned_cols=349 Identities=12% Similarity=0.009 Sum_probs=196.6
Q ss_pred hcCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++ .-.+.+|.+.+++.+.++....... .....+...++.++|++++..+. ..+.++++|+
T Consensus 40 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~-~~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~SGs 113 (428)
T PRK07986 40 ADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMF-GGITHPPAIELCRKLVAMTPQPL-----ECVFLADSGS 113 (428)
T ss_pred CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccc-cccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCCcH
Confidence 356655544332 2335678999999888876332111 01122344557777888764321 3489999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC-------------eeEEEeccCCc----c-
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLSEGY----Y- 188 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~----~- 188 (494)
||+..|++.++..+..+ | ..+.+|+ .....|....-+....|- .+..++..... +
T Consensus 114 EAve~AlklAr~~~~~~----g--~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 187 (428)
T PRK07986 114 VAVEVAMKMALQYWQAK----G--EPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWD 187 (428)
T ss_pred HHHHHHHHHHHHHHHhc----C--CCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhH
Confidence 99999999997643211 1 1124554 455567544333322221 12233321100 0
Q ss_pred ccCHHHHHHhhhh--CCeEEEEeeC--CCCcccc----cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc
Q 011057 189 VMDPVKAVEMVDE--NTICVAAILG--STLNGEF----EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE 260 (494)
Q Consensus 189 ~~d~~~L~~~i~~--~t~~vv~~~~--~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~ 260 (494)
.-|++++++.+.. +..+.+++.| ....|.+ ..+++|.++|+++ |+++++|+++.++. . ......
T Consensus 188 ~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~------g~lLI~DEv~tG~G-r-tG~~fa 259 (428)
T PRK07986 188 ERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDRE------GILLIADEIATGFG-R-TGKLFA 259 (428)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc------CCEEEEeccccCCc-c-CCCeee
Confidence 2366788887753 2233444444 2333433 3389999999999 99999999996531 1 111111
Q ss_pred c-cccCCCceEEEEcCcccCCcC-CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHh
Q 011057 261 W-DFRLPLVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFE 338 (494)
Q Consensus 261 ~-~~~~~~~D~~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~ 338 (494)
. .+++ ..|.++ .-|.+.++ ..+|.++++++ . .+.+.... . .......+ ++.++....+..++|+.+.++
T Consensus 260 ~~~~gv-~PDi~t--~gK~l~gG~~p~~av~~~~~-i-~~~~~~~~-~-~~~~~~~T--~~g~p~~~aaa~a~L~~i~~~ 330 (428)
T PRK07986 260 CEHAGI-APDILC--LGKALTGGTMTLSATLTTRE-V-AETISNGE-A-GCFMHGPT--FMGNPLACAVANASLSLLESG 330 (428)
T ss_pred ecccCC-CCCEEE--echhhhCCcccCcchhchHH-H-HHHhhcCC-C-CccccCCC--CCcCHHHHHHHHHHHHHHHhC
Confidence 1 1222 357776 45776544 24455554432 1 12111100 0 00000112 223345556666777777654
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-CccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEE
Q 011057 339 GYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVL 417 (494)
Q Consensus 339 g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~l 417 (494)
+..++..++.++|++.|+++.....+.+-. ...++.+.+..+ .+...+.+.|.++|+++... + .++
T Consensus 331 ---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~--~~~~~~~~~l~~~Gl~~~~~-------g-~~i 397 (428)
T PRK07986 331 ---DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRP--VNMAALQRFFVEQGVWIRPF-------G-KLI 397 (428)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCc--ccHHHHHHHHHHCCcEEEec-------C-CEE
Confidence 357778888888888888763222222211 234666666432 24568899999999986431 2 468
Q ss_pred EEEeccCCChHHHHHHHHHHHHHHH
Q 011057 418 RVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 418 Rvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
|++-...+|+++++.+++.|+++++
T Consensus 398 ~~~Ppl~it~~ei~~~~~~l~~~l~ 422 (428)
T PRK07986 398 YLMPPYIILPEQLQRLTAAVNRAVQ 422 (428)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 9887777899999999999988874
No 336
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.54 E-value=1.3e-11 Score=125.88 Aligned_cols=341 Identities=14% Similarity=0.010 Sum_probs=187.2
Q ss_pred hcCCCCCccccc----ccCCChHHHHHHHHHHhcccCC-CCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecCh
Q 011057 52 LDGNPRLNLASF----VTTWMEPECDKLMMAAINKNYV-DMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGS 126 (494)
Q Consensus 52 ~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~gg 126 (494)
.+|+.++.+.++ .-.+.+|.+.+++.+.+++... .+... ..+.+.++.+.|++++.... ...+.|+++|
T Consensus 30 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~--~~~~~~~la~~l~~~~p~~~----~~~v~f~~sG 103 (420)
T TIGR00700 30 VDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVT--PYEGYVALAEKLNRIAPGSG----PKKSVFFNSG 103 (420)
T ss_pred CCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCcccccc--CChHHHHHHHHHHHhCCCCC----CCEEEEeCCc
Confidence 356655544333 2235578899999888876322 11111 12233356677887764211 1248999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcC--------C-----eeEEEeccCC------
Q 011057 127 SEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFE--------V-----ELKEVKLSEG------ 186 (494)
Q Consensus 127 t~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G--------~-----~v~~v~~~~~------ 186 (494)
+||+..|++.++.. .| ++.|+ .....|....-+....| . ++..++....
T Consensus 104 seA~e~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (420)
T TIGR00700 104 AEAVENAVKIARSY-------TG----RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLL 172 (420)
T ss_pred HHHHHHHHHHHHHh-------cC----CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccc
Confidence 99999999999753 12 23444 56667765444433222 1 1233333110
Q ss_pred ----ccccCHHHHHHhhh-----hCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEeccccccccc
Q 011057 187 ----YYVMDPVKAVEMVD-----ENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAP 253 (494)
Q Consensus 187 ----~~~~d~~~L~~~i~-----~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (494)
...-+++.+++.+. ++..+|++--....+|.+.| +++|.++|++| ++++++|++|.++..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~------gillI~DEV~tg~gr- 245 (420)
T TIGR00700 173 DKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREH------GIVFIADEVQTGFAR- 245 (420)
T ss_pred ccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEEecccCCcc-
Confidence 00112456776653 23455655444446677655 89999999999 999999999987521
Q ss_pred ccCCcccc-cccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 254 FLYPELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 254 ~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
....... .+++ ..|.++ ..|.+.+++.+|+++.+++ .+ +.+.. ... ..++ ..++....+..+++
T Consensus 246 -~g~~~a~~~~~~-~pDi~~--lsK~l~~G~pig~v~~~~~-i~-~~~~~--~~~-----~~T~--~~~pl~~aaa~a~l 310 (420)
T TIGR00700 246 -TGAMFACEHEGP-EPDLIT--TAKSLADGLPLSGVTGRAE-IM-DAPAP--GGL-----GGTY--AGNPLACAAALAVL 310 (420)
T ss_pred -cchhHHHhhcCC-CCCEEE--eeccccCCcceEEEEecHH-HH-hhcCC--CCc-----CCCC--CcCHHHHHHHHHHH
Confidence 1110010 1111 367665 4588877788999887543 22 11110 000 1111 22223344455556
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhh----CCCeEEeecCCCccEEEEEecCCC-C----CCHHHHHHHHHhcCceee
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEK----TGRFNIVSKDEGVPLVAFSLKDNK-R----HDEFEVAELLRRFGWIVP 403 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~~v~f~~~~~~-~----~~~~~l~~~L~~~Gi~v~ 403 (494)
+.+.++.+ .++..++.+++++.|++ .+.+.-+.. ...++.+.+.... . .....+.+.+.++|+.+.
T Consensus 311 ~~l~~~~~---~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg--~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~ 385 (420)
T TIGR00700 311 AIIESEGL---IERARQIGRLVTDRLTTLKAVDPRIGDVRG--LGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLL 385 (420)
T ss_pred HHHHhccH---HHHHHHHHHHHHHHHHHHHhhCCCEEEeec--cceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEe
Confidence 66655544 34444555555555544 332222222 3445566553210 0 113467777789999863
Q ss_pred ccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 404 AYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 404 ~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
.. ... ..++|++....++.++++..++.|++++
T Consensus 386 p~----~~f-~~~lRl~p~l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 386 TC----GMF-GNIIRFLPPLTIGDELLSEGLDILCAIL 418 (420)
T ss_pred cc----CCC-CCEEEEECCCCcCHHHHHHHHHHHHHHh
Confidence 31 111 2579999766678899998888887765
No 337
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.53 E-value=8e-12 Score=128.02 Aligned_cols=343 Identities=13% Similarity=0.021 Sum_probs=192.6
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.+++.. .+.......+...++.++|++++.... .....++++|+|
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~~~~~~~~~~~~la~~l~~~~p~~~----~~~v~f~~sGse 128 (443)
T PRK06058 54 DGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFT-HTCFMVTPYEGYVAVAEQLNRLTPGDH----EKRSALFNSGAE 128 (443)
T ss_pred CCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhcc-CccccccCCHHHHHHHHHHHHhCCCCC----CCEEEEeCCcHH
Confidence 45555444433 233557899999988887532 111111223444567778888775321 024789999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC-------------eeEEEeccCCccc-----
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLSEGYYV----- 189 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~----- 189 (494)
|+..|++.++.. .| +.+|+ .....|....-+....+. .+..++.... +.
T Consensus 129 A~e~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 196 (443)
T PRK06058 129 AVENAVKIARSY-------TG----RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYP-YRDPKGL 196 (443)
T ss_pred HHHHHHHHHHHh-------hC----CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcc-ccccccc
Confidence 999999988653 11 24455 455567655444433221 1222332110 10
Q ss_pred -c--------CHHHHHHhhh-hCCeEEEEeeCCCCc-ccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 190 -M--------DPVKAVEMVD-ENTICVAAILGSTLN-GEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 190 -~--------d~~~L~~~i~-~~t~~vv~~~~~~~t-G~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
. ..+.+++.+. ++..+|+ ..|.... |.+.| +++|.++|++| |+++++|+++.++..
T Consensus 197 ~~~~~~~~~~~~~~l~~~~~~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~------gillI~DEV~tGfgR-- 267 (443)
T PRK06058 197 ATDGEEAAARAITVIEKQVGADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCREN------GVVFIADEVQTGFAR-- 267 (443)
T ss_pred ccchHHHHHHHHHHHHHhhCCCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--
Confidence 1 1223344443 2344444 5555544 55543 89999999999 999999999976521
Q ss_pred cCCcccc-cccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHH
Q 011057 255 LYPELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLI 333 (494)
Q Consensus 255 ~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~ 333 (494)
....... .+++ ..|.+++. |.+.++..+|+++.+++ .. +.+.. . ....+ +..++....+..++|+
T Consensus 268 tG~~fa~~~~gv-~PDiv~~g--K~l~~G~Pi~av~~~~~-i~-~~~~~--~-----~~~~T--~~gnpl~~aaa~a~L~ 333 (443)
T PRK06058 268 TGAWFACEHEGI-VPDLITTA--KGIAGGLPLSAVTGRAE-IM-DAPHP--G-----GLGGT--YGGNPVACAAALAAIE 333 (443)
T ss_pred ChhhhHHHhcCC-CCCEEEEc--ccccCCCccEEEEEcHH-HH-hhccC--C-----CCCCC--CCCCHHHHHHHHHHHH
Confidence 1111111 1122 35877764 88776677888887643 22 11110 0 00112 2222344555566666
Q ss_pred HhcHhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEeecC-CCccEEEEEecCCC-CC-C---HHHHHHHHHhcCceeeccc
Q 011057 334 RLGFEGYRNVMENCHENAMVLKEGLEKTG-RFNIVSKD-EGVPLVAFSLKDNK-RH-D---EFEVAELLRRFGWIVPAYT 406 (494)
Q Consensus 334 ~l~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~-~~~~~v~f~~~~~~-~~-~---~~~l~~~L~~~Gi~v~~~~ 406 (494)
.+.++ +..++..++.++|.++|+++. ...++.+- ....++.+.+.... .. + ...+.+.+.++|+++...
T Consensus 334 ~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~- 409 (443)
T PRK06058 334 TIEED---DLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTC- 409 (443)
T ss_pred HHHHc---CHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEecc-
Confidence 66544 456677777888888887652 12222211 13456666663211 11 1 345777788999986431
Q ss_pred cCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 407 MPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 407 ~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
... ..++|+.....+|.++++.+++.|++++++
T Consensus 410 ---~~~-~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 410 ---GTY-GNVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred ---CCC-CCEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 111 247999877788999999999999988765
No 338
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.53 E-value=1.2e-11 Score=125.77 Aligned_cols=351 Identities=11% Similarity=-0.035 Sum_probs=198.9
Q ss_pred hcCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++ .-.+.+|.+.+++.+.+++...... .....+.+.++.+.|++++..+. ..+.|+++|+
T Consensus 41 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGs 114 (429)
T PRK06173 41 KDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMF-GGFTHEPAVELAQKLLEILPPSL-----NKIFFADSGS 114 (429)
T ss_pred CCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccc-cccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCCch
Confidence 356666554442 2235578999998888776332111 11122334457777888764221 3489999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC-------------eeEEEeccCCc-----c
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLSEGY-----Y 188 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~-----~ 188 (494)
||+..|++.++..+..+ |. ..+.+|+ .....|....-+....|- .+..+|..... .
T Consensus 115 eAve~AlklAr~~~~~~----g~-~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 189 (429)
T PRK06173 115 VAVEVAMKMALQYQQAK----GE-VQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWN 189 (429)
T ss_pred HHHHHHHHHHHHHHHHh----CC-CCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHH
Confidence 99999999998653221 11 1123454 455567643222222110 12333321100 0
Q ss_pred ccCHHHHHHhhhh---CCeEEEEeeC--CCCccccc----CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcc
Q 011057 189 VMDPVKAVEMVDE---NTICVAAILG--STLNGEFE----DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPEL 259 (494)
Q Consensus 189 ~~d~~~L~~~i~~---~t~~vv~~~~--~~~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~ 259 (494)
..+++.|++.+.. +..+|+ ..| ....|.+. =+++|.++|++| |+++++|+++.++ .. .....
T Consensus 190 ~~~l~~l~~~i~~~~~~iAAvi-~EPi~qg~gG~~~~~~~yl~~l~~lc~~~------g~llI~DEv~tG~-Gr-tG~~~ 260 (429)
T PRK06173 190 DEAIEPLQDLLEQKGDEIAALI-LEPVVQGAGGMYFYSPTYLVKARELCDQY------GVLLIFDEIATGF-GR-TGKLF 260 (429)
T ss_pred HHHHHHHHHHHHhCCCcEEEEE-EcchhhccCCcccCCHHHHHHHHHHHHHc------CCeEEecchhcCC-Cc-CCcch
Confidence 1246677777753 334444 444 34445552 278999999999 9999999999653 11 11111
Q ss_pred -cccccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH
Q 011057 260 -EWDFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF 337 (494)
Q Consensus 260 -~~~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~ 337 (494)
...+++ ..|.++ .-|.+.++. .++.++.+++ .. +.+.... .....-..+ +..++....+..++|+.+.+
T Consensus 261 a~~~~gv-~PDiv~--~gK~l~gG~~p~~a~~~~~~-i~-~~~~~~~--~~~~~~~~T--~~g~p~~~aaa~a~l~~i~~ 331 (429)
T PRK06173 261 ALEHAGV-VPDIMC--IGKALTGGYLTLSATITTEA-IA-QTICSGE--AKCFMHGPT--FMANPLACAIAAESIRLLLE 331 (429)
T ss_pred HHHhcCC-CCCEEE--eehhhhCCccccceEEecHH-HH-HHHhcCC--CCccccCCC--CCcCHHHHHHHHHHHHHHHh
Confidence 011222 367776 458765442 3555655442 11 1111000 000000011 12234556667777777755
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecC-CCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceE
Q 011057 338 EGYRNVMENCHENAMVLKEGLEKTGRFNIVSKD-EGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITV 416 (494)
Q Consensus 338 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~ 416 (494)
+. ..++..++.++|++.|+++.++..+.+- ....++.+.+... .+...+.+.|.++|+++... + .+
T Consensus 332 ~~---~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~--~~~~~i~~~l~e~Gi~v~~~-------g-~~ 398 (429)
T PRK06173 332 SP---WQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEP--VNMATLQPRFVEHGIWVRPF-------G-KL 398 (429)
T ss_pred CC---HHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCc--ccHHHHHHHHHHCCeEEEec-------C-CE
Confidence 43 4677888888999999865334333221 1345777777432 34568999999999987431 2 47
Q ss_pred EEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 417 LRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 417 lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
+|+.-...+|++|++.+++.|++++..+
T Consensus 399 l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 399 VYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred EEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 8998877889999999999999998764
No 339
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.53 E-value=2.7e-11 Score=124.08 Aligned_cols=344 Identities=15% Similarity=0.072 Sum_probs=198.0
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.+++-......+ ...+...++.+.|+++++... ..+.|+++|+|
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~-~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGsE 124 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGY-THSERAIRVAEKLAEISPIEN-----PKVLFGLSGSD 124 (457)
T ss_pred CCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccCc-cCCHHHHHHHHHHHhhCCCCc-----CEEEEeCchHH
Confidence 55555544443 233567889999988877532211111 112333457777888765321 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEe-CCCcchHHHHHHHHcCC-------------eeEEEeccCCccc-----
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIVT-GANVQVCWEKFARYFEV-------------ELKEVKLSEGYYV----- 189 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~----- 189 (494)
|+..|++.++.. .| +.+|+. ....|....-+....|. .+..+|.... +.
T Consensus 125 A~e~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~ 192 (457)
T PRK05639 125 AVDMAIKVSKFS-------TR----RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNP-YRNPWGI 192 (457)
T ss_pred HHHHHHHHHHHh-------cC----CCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcc-ccccccc
Confidence 999999999753 11 234554 55677654444333221 1334443210 00
Q ss_pred ---cCH--------HHHHHhhh------hCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccc
Q 011057 190 ---MDP--------VKAVEMVD------ENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASG 248 (494)
Q Consensus 190 ---~d~--------~~L~~~i~------~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~ 248 (494)
-|. +.+++.+. .+..+|++--.....|.+.| +++|.++|++| |+++++|+++.
T Consensus 193 ~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~------g~llI~DEv~t 266 (457)
T PRK05639 193 NGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEH------GILLVMDEVQT 266 (457)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhh
Confidence 122 23444442 23455555433334465533 78999999999 99999999997
Q ss_pred cccccccCCccc-ccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHH
Q 011057 249 GFIAPFLYPELE-WDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIA 327 (494)
Q Consensus 249 ~~~~~~~~~~~~-~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a 327 (494)
++-- ...... ..+++ ..|.+++ -|.+.++.++|+++.+++ .. +. ....+ .+++ ..++....+
T Consensus 267 G~Gr--tG~~~a~~~~gv-~PDiv~~--gK~l~gG~pi~av~~~~~-i~-~~--~~~~~------~~T~--~g~p~~~aa 329 (457)
T PRK05639 267 GIGR--TGKWFASEWFEV-KPDLIIF--GKGVASGMGLSGVIGRKE-LM-DL--TSGSA------LLTP--AANPVISAA 329 (457)
T ss_pred ccCc--CchHHHHHhcCC-CCCEEEe--chhhcCCCcceeEEehHH-HH-hh--cCCCc------ccCC--CcCHHHHHH
Confidence 6411 111001 11233 4788874 588876677788877553 22 11 00011 1121 222344555
Q ss_pred HHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEeecCC-CccEEEEEecCCCC----CCHHHHHHHHHhcCce
Q 011057 328 QYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTG-RFNIVSKDE-GVPLVAFSLKDNKR----HDEFEVAELLRRFGWI 401 (494)
Q Consensus 328 ~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~~----~~~~~l~~~L~~~Gi~ 401 (494)
..++|+.+.++ ...++..++.++|+++|+++. ++.++.+-. ...++.+.+..+.. .....+.+.+.++|++
T Consensus 330 a~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~ 406 (457)
T PRK05639 330 AEATLEIIEEE---NLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLI 406 (457)
T ss_pred HHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeE
Confidence 66667766554 345666778888888887741 133332211 23455555532211 0135688889999998
Q ss_pred eeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 402 VPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 402 v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
+... ..+..++|++....+|++++|.+++.|+++++.+.
T Consensus 407 ~~~~-----g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 407 LPSY-----GMFGNVIRITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred Eeec-----CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 7432 12246799999999999999999999999998774
No 340
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.53 E-value=1.5e-11 Score=125.97 Aligned_cols=325 Identities=13% Similarity=0.024 Sum_probs=184.4
Q ss_pred CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
+.+|.+.+++.+.++.... + .. ..+.+.++.++|++.+..- ..+.|+++||||+..|++.++..
T Consensus 115 h~~p~v~~av~~ql~~~~~-~-~~--~~~~~~~lAe~l~~~~p~~------~~v~f~~SGsEA~e~AlklAR~~------ 178 (474)
T PLN02482 115 HADDEVLAALAETMKKGTS-F-GA--PCLLENVLAEMVIDAVPSV------EMVRFVNSGTEACMGVLRLARAY------ 178 (474)
T ss_pred CCCHHHHHHHHHHHhhCCC-C-CC--CCHHHHHHHHHHHHhCCCC------CEEEEeCChHHHHHHHHHHHHHh------
Confidence 4578899999888876432 2 11 2345566788888876421 24899999999999999999764
Q ss_pred hcCCCCCCCeEE-eCCCcchHHHHHHHHc--CCe------eEEEecc--CCc---cccCHHHHHHhhhh---CCeEEEEe
Q 011057 147 AEGKPFDKPNIV-TGANVQVCWEKFARYF--EVE------LKEVKLS--EGY---YVMDPVKAVEMVDE---NTICVAAI 209 (494)
Q Consensus 147 ~~g~~~~~~~vi-~~~~~h~s~~~~~~~~--G~~------v~~v~~~--~~~---~~~d~~~L~~~i~~---~t~~vv~~ 209 (494)
.| +.+|+ +....|.......... |.. ...++.. ++. -.-|+++|++.+.. +..+|++-
T Consensus 179 -tg----r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~E 253 (474)
T PLN02482 179 -TG----REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILE 253 (474)
T ss_pred -cC----CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEEC
Confidence 12 24554 4555676432211111 100 0000100 000 01378899988864 23444444
Q ss_pred eCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCce
Q 011057 210 LGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGI 285 (494)
Q Consensus 210 ~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 285 (494)
-.....|.+.| +++|.++|++| |+++++|+++.++-.. .......+++ ..|.+++ -|.+.++..+
T Consensus 254 pv~g~~G~i~p~~~fl~~lr~lc~~~------g~lLI~DEV~tGfR~g--~~ga~~~~gv-~PDi~t~--gK~lggG~Pi 322 (474)
T PLN02482 254 PVVGNSGFIVPKKEFLEGLREITKEN------GALLVFDEVMTGFRIA--YGGAQEYFGI-TPDLTTL--GKVIGGGLPV 322 (474)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCeecC--cchHhHHhCC-CCCEEEe--cchhhCCCce
Confidence 44445677766 55899999999 9999999999764221 1100112233 3677654 5888766667
Q ss_pred EEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC---
Q 011057 286 GWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTG--- 362 (494)
Q Consensus 286 G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~--- 362 (494)
|.++.+++ .+ +.+.....+. ...++ +.++....+..++|+.+.++ +..++..++.++|+++|+++.
T Consensus 323 gav~g~~e-i~-~~~~~~~~~~----~~~T~--~gnpl~~aAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~ 391 (474)
T PLN02482 323 GAYGGRRE-IM-EMVAPAGPMY----QAGTL--SGNPLAMTAGIHTLKRLQQP---GTYEYLDKITKKLIQGILEAGKKA 391 (474)
T ss_pred EEEEEcHH-HH-HhhccCCCcc----cccCc--chhHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88865432 22 2111000000 01111 12234445566667777543 466777788888888887653
Q ss_pred CeEEeecCCCccEEEEEecCCCC--------CC---HHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHH
Q 011057 363 RFNIVSKDEGVPLVAFSLKDNKR--------HD---EFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAE 431 (494)
Q Consensus 363 ~~~~~~~~~~~~~v~f~~~~~~~--------~~---~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id 431 (494)
++.+.... ..+++.+.+..... -+ ...+.+.|.++|+++.....+. + .....+|++|||
T Consensus 392 g~~~~~~~-v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~---~------~psl~ht~~dId 461 (474)
T PLN02482 392 GHEMCGGY-ISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFEA---G------FTSLAHTEEDID 461 (474)
T ss_pred CCCEEEcc-cceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCCC---C------cCCCCCCHHHHH
Confidence 12333222 22455555432110 11 2467888999999875432221 1 145567999999
Q ss_pred HHHHHHHHHHHHH
Q 011057 432 RLVLDITKVLHEL 444 (494)
Q Consensus 432 ~~i~~l~~~~~~l 444 (494)
++++.+++++.++
T Consensus 462 ~~l~al~~~l~~~ 474 (474)
T PLN02482 462 FTIAAAERVLARI 474 (474)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999988653
No 341
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.53 E-value=1.9e-11 Score=124.69 Aligned_cols=336 Identities=16% Similarity=0.070 Sum_probs=191.9
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.+....... . ..+.+.++.+.|.+++.. . ..+.|+++|+|
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~--~--~~~~~~~la~~l~~~~p~-~-----~~v~f~~sGse 120 (428)
T PRK12389 51 DGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYG--T--PTELEIEFAKMLKEAIPS-L-----EKVRFVNSGTE 120 (428)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccC--C--CCHHHHHHHHHHHHhCCC-C-----cEEEEeCCHHH
Confidence 56655544332 233557889999988877532211 1 223345577778777641 1 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCCeeE--------EEe--ccCCc---cccCHHH
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEVELK--------EVK--LSEGY---YVMDPVK 194 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~~v~--------~v~--~~~~~---~~~d~~~ 194 (494)
|+..|++.++... | +.+|+ +....|....-+....|.... .++ ..++. -.-|++.
T Consensus 121 A~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 189 (428)
T PRK12389 121 AVMTTIRVARAYT-------G----RTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEA 189 (428)
T ss_pred HHHHHHHHHHHhh-------C----CCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHH
Confidence 9999999997641 1 23454 455677655444433331110 000 00000 0126888
Q ss_pred HHHhhhh---CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCC
Q 011057 195 AVEMVDE---NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPL 267 (494)
Q Consensus 195 L~~~i~~---~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 267 (494)
+++.+.. +..+|++--.....|.+.| +++|.++|+++ |+++++|+++.++-..+. .....+++ .
T Consensus 190 l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~------g~llI~DEV~tG~Rt~~~--~a~~~~gv-~ 260 (428)
T PRK12389 190 LKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEA------GALVIYDEVITAFRFMYG--GAQDLLGV-E 260 (428)
T ss_pred HHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEEccccccccCcc--hhhHHhCC-C
Confidence 9888863 3445555445556688877 99999999999 999999999987621111 00111232 3
Q ss_pred ceEEEEcCcccCCcCCceEEEEEeCCCCcccccccc-cCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHH
Q 011057 268 VKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFH-INYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMEN 346 (494)
Q Consensus 268 ~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~-~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~ 346 (494)
.|.+++ -|.+.++..+|.++.+++ .. +.+... ..+. ..| ++.++...++..++|+.+.+++ ..++
T Consensus 261 PDivt~--gK~lggG~Pi~av~~~~~-i~-~~~~~~~~~~~-----~~T--~~gnpl~~Aaala~L~~l~~~~---l~~~ 326 (428)
T PRK12389 261 PDLTAL--GKIIGGGLPIGAYGGRKD-IM-EQVAPLGPAYQ-----AGT--MAGNPASMAAGIACLEVLQQEG---VYEK 326 (428)
T ss_pred CCeeee--chhhcCCCceeEEeEHHH-HH-hhhccCCCccc-----ccC--CccCHHHHHHHHHHHHHHhccc---HHHH
Confidence 677654 588766566777766542 22 221100 0011 111 2233345566667777776543 5667
Q ss_pred HHHHHHHHHHHHhhC----CCeEEeecCCCccEEEEEecCCCCC--------C---HHHHHHHHHhcCceeeccccCCCC
Q 011057 347 CHENAMVLKEGLEKT----GRFNIVSKDEGVPLVAFSLKDNKRH--------D---EFEVAELLRRFGWIVPAYTMPADA 411 (494)
Q Consensus 347 ~~~~a~~l~~~L~~~----~~~~~~~~~~~~~~v~f~~~~~~~~--------~---~~~l~~~L~~~Gi~v~~~~~~~~~ 411 (494)
..++.++|++.|+++ + +..-... ..+++.+.+...... + ...+.+.|.++|+++.....
T Consensus 327 ~~~~g~~l~~~L~~l~~~~~-~~~~v~r-~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---- 400 (428)
T PRK12389 327 LDRLGAMLEEGILEAAEKHG-ITITINR-LKGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKY---- 400 (428)
T ss_pred HHHHHHHHHHHHHHHHHhCC-CCEEEEe-cCcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCC----
Confidence 778888888888763 3 2111111 223555554321100 1 34678889999998744211
Q ss_pred CCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 412 QHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 412 ~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
..+. ....+|++|++.+++.+++++++
T Consensus 401 ---~~~~--~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 401 ---EAWF--LTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred ---CCee--ecCCCCHHHHHHHHHHHHHHHHh
Confidence 1122 34567999999999999988864
No 342
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=1.3e-11 Score=126.56 Aligned_cols=327 Identities=10% Similarity=0.021 Sum_probs=190.2
Q ss_pred CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
+.+|.+.+++.+.++....... ....+.+.++.+.|+++++... ....|+++|+||+..+++.++..
T Consensus 87 h~~p~v~~Ai~~ql~~~~~~~~--~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGseAve~AlklAr~~------ 153 (459)
T PRK06082 87 YGHPHVIEKVKEQMAKLPFSPR--RFTNETAIECAEKLTEIAGGEL-----NRVLFAPGGTSAIGMALKLARHI------ 153 (459)
T ss_pred CCCHHHHHHHHHHHHhCCCccC--ccCCHHHHHHHHHHHHhCCCCC-----CEEEECCCcHHHHHHHHHHHHHh------
Confidence 4578899999888875332211 1223455567788888875321 24899999999999999998753
Q ss_pred hcCCCCCCCeE-EeCCCcchHHHHHHHHcCC------------eeEEEeccCC---cc-cc------CHHHHHHhhhh--
Q 011057 147 AEGKPFDKPNI-VTGANVQVCWEKFARYFEV------------ELKEVKLSEG---YY-VM------DPVKAVEMVDE-- 201 (494)
Q Consensus 147 ~~g~~~~~~~v-i~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~---~~-~~------d~~~L~~~i~~-- 201 (494)
.| +.+| .+....|.....+....|. .+..+|.... .+ .. +++.|++.++.
T Consensus 154 -tg----r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 228 (459)
T PRK06082 154 -TG----NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEG 228 (459)
T ss_pred -cC----CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCC
Confidence 11 2344 4566677655444443332 1233332110 00 01 13557777753
Q ss_pred CCeEEEEeeCCCCccc-ccC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccCCCceEEEEcCc
Q 011057 202 NTICVAAILGSTLNGE-FED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRLPLVKSINVSGH 276 (494)
Q Consensus 202 ~t~~vv~~~~~~~tG~-~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~h 276 (494)
+..+|+ ..|....|. +.| +++|.++|++| |+++++|+++.++.- ....... .+++ ..|.+++ -
T Consensus 229 ~vAavI-vEPv~g~g~~~~~~~yl~~lr~lc~~~------g~llI~DEV~tG~GR--tG~~fa~e~~gv-~PDiv~~--g 296 (459)
T PRK06082 229 GIGAFI-AEAVRNTDVQVPSKAYWKRVREICDKH------NVLLIIDEIPNGMGR--TGEWFTHQAYGI-EPDILCI--G 296 (459)
T ss_pred CEEEEE-ECCccCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--cchhhHhHhhCC-CCCEEEe--c
Confidence 333444 444433343 344 89999999999 999999999976411 1110010 1222 4787764 5
Q ss_pred ccCCcCC-ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHH
Q 011057 277 KYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLK 355 (494)
Q Consensus 277 K~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~ 355 (494)
|.+.++. .+|.++.++. .. ... ...+. .++ +..++....+..++|+.+.++ +..++..++.++|+
T Consensus 297 Kgl~gG~~P~~av~~~~~-i~-~~~--~~~~~-----~~T--~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~ 362 (459)
T PRK06082 297 KGLGGGLVPIAAMITKDK-YN-TAA--QISLG-----HYT--HEKSPLGCAAALATIEVIEQE---GLLEKVKADSQFMR 362 (459)
T ss_pred ccccCCCCcceEEEEcHH-HH-hhc--cCCCC-----CCC--CCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHH
Confidence 8776653 5677776543 11 111 00000 112 222334555666777777554 35677778888888
Q ss_pred HHHhhCCC-eEEeecCC-CccEEEEEecCCCC---CC---HHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCCh
Q 011057 356 EGLEKTGR-FNIVSKDE-GVPLVAFSLKDNKR---HD---EFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSR 427 (494)
Q Consensus 356 ~~L~~~~~-~~~~~~~~-~~~~v~f~~~~~~~---~~---~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~ 427 (494)
+.|+++.. ..++..-. ...++.+.+..... .+ ...+...+.++|+++.. .+..++|++....+|+
T Consensus 363 ~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~-------~~~~~i~~~Ppl~it~ 435 (459)
T PRK06082 363 ERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKV-------SQGNVIQLSPPLIITR 435 (459)
T ss_pred HHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEe-------cCCCEEEEeCCCccCH
Confidence 88876521 22222211 33456666642110 11 34677788899998632 1235789887667799
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011057 428 TLAERLVLDITKVLHEL 444 (494)
Q Consensus 428 ~~id~~i~~l~~~~~~l 444 (494)
+++|.+++.+++++.++
T Consensus 436 ~eid~~~~~l~~~l~~~ 452 (459)
T PRK06082 436 EELTQALAILEEAIAKI 452 (459)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999876
No 343
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=5.2e-12 Score=119.35 Aligned_cols=346 Identities=13% Similarity=0.062 Sum_probs=212.2
Q ss_pred hcCCCCCcccccccC--CChHHHHHHHHHHhcccCCCC---CCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecCh
Q 011057 52 LDGNPRLNLASFVTT--WMEPECDKLMMAAINKNYVDM---DEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGS 126 (494)
Q Consensus 52 ~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~gg 126 (494)
.+|++.+|++++... ...+.+.+.....+.+.+.+. -.+-++...+-.+.+.||+++|.+. .++-+-|
T Consensus 91 i~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~-------aivYs~g 163 (467)
T KOG1358|consen 91 IDGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTED-------AIVYSYG 163 (467)
T ss_pred ecCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCcc-------eeeeccc
Confidence 467777777774432 335667776667776653321 1222445555556677999999986 4444444
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCC---
Q 011057 127 SEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENT--- 203 (494)
Q Consensus 127 t~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t--- 203 (494)
-.++..++-+...+ ++.|++....++.+.+..+..--.+..+. +.|++.|+..+.+.+
T Consensus 164 F~ti~S~ipafsKr-------------GDIi~~de~~nfaIq~GlqlSRS~i~~Fk------hndm~~lerll~E~~~~~ 224 (467)
T KOG1358|consen 164 FSTIESAIPAFSKR-------------GDIIFVDEAVNFAIQKGLQLSRSTISYFK------HNDMEDLERLLPEQEDED 224 (467)
T ss_pred cchhhhcchhhhcc-------------CcEEEEehhhhHHHHHHHhhhhheeEEec------CCCHHHHHHhccCcchhh
Confidence 44444455454332 25778888899999988887776777776 456777776664332
Q ss_pred ---------eEEEEeeCCC-CcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccccccc--CCCceEE
Q 011057 204 ---------ICVAAILGST-LNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR--LPLVKSI 271 (494)
Q Consensus 204 ---------~~vv~~~~~~-~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~~~D~~ 271 (494)
+..+++.|-+ ++|.+.|+.+|.++..+| ...+++|+.++.|.+.-........++ ...+|.+
T Consensus 225 ~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Ky------k~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv 298 (467)
T KOG1358|consen 225 QKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKY------KFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIV 298 (467)
T ss_pred hhccccccceEEEEEEeeccCCCcccccHHHHHHHhhh------eEEEEEecccccccccccCccccccCCCCccceeee
Confidence 4455555555 889999999999999999 999999999988765332233333343 3468888
Q ss_pred EEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHH
Q 011057 272 NVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENA 351 (494)
Q Consensus 272 ~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a 351 (494)
+.+..-.+.. .|.+.+.+. .+... .-+.+. .+.++.+.|+..+.+...++..+..+ .++.+.+....
T Consensus 299 ~~sm~~alas---~GgFc~G~~-~i~~h-----QrLSg~--~Y~fSAslPp~la~aa~~ai~i~~~~--p~~~~~L~~k~ 365 (467)
T KOG1358|consen 299 TASMETALAS---GGGFCAGKS-FIADH-----QRLSGS--GYCFSASLPPYLAGAAIKAILIEEWN--PEIVQPLRAKV 365 (467)
T ss_pred eecccccccc---cCceeecce-eeEee-----eecccc--ceeeeccCchhhhhhHHHHHHHHhhC--cchhhhhhccc
Confidence 8877665532 233333322 21111 001111 22233344444455555556555444 34666777777
Q ss_pred HHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCC--C----HHHHHHHHHhcCceeec--cccCC-CCCCceEEEEEec
Q 011057 352 MVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRH--D----EFEVAELLRRFGWIVPA--YTMPA-DAQHITVLRVVIR 422 (494)
Q Consensus 352 ~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~--~----~~~l~~~L~~~Gi~v~~--~~~~~-~~~~~~~lRvs~~ 422 (494)
..+...|+...++++.+.+ -.+++-..+....+- + -++++++...+|+.+.. +.-.- ...-..-+|+++.
T Consensus 366 ~~~H~~l~~~s~~~v~~~~-~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~ 444 (467)
T KOG1358|consen 366 AKFHAALSSNSGFIVSGSP-ESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVS 444 (467)
T ss_pred cccchhhhcCCceEEecCc-CCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEe
Confidence 8888888887778888776 578887777553210 1 23455554455766521 11000 0011224999999
Q ss_pred cCCChHHHHHHHHHHHHHHHH
Q 011057 423 EDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 423 ~~~t~~~id~~i~~l~~~~~~ 443 (494)
..++++|++++.+.|+++...
T Consensus 445 a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 445 AGMSEEELERAAELIKEVASA 465 (467)
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999888887654
No 344
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.51 E-value=3.8e-11 Score=122.69 Aligned_cols=345 Identities=12% Similarity=0.014 Sum_probs=186.5
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ ...+.+|.+.+++.+.++......... .......++.++|+++.+.+.. ....++++|++
T Consensus 39 dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~-~~~~~~~~la~~l~~~~~~~~~----~~~~f~~sGse 113 (425)
T PRK08088 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQV-LAYEPYLELCEKMNQKVPGDFA----KKTLLVTTGSE 113 (425)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccc-cCCHHHHHHHHHHHHhCCCCCC----CEEEEeCCcHH
Confidence 45554443332 233457888899988887643211110 1112233577778887764321 24789999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCC-------------eeEE--EeccCCcccc--C
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEV-------------ELKE--VKLSEGYYVM--D 191 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~-------------~v~~--v~~~~~~~~~--d 191 (494)
|+..++..++... |. ...|.+....|....-+....+- .+.. +|.+..+... +
T Consensus 114 a~e~Alklar~~~-------~r---~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 183 (425)
T PRK08088 114 AVENAVKIARAAT-------KR---SGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDA 183 (425)
T ss_pred HHHHHHHHHHHHh-------CC---CeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHH
Confidence 9999999986531 10 12345566677654443332221 0111 2222110111 1
Q ss_pred HHHHHHhhh----hCCeEEEEeeCCC-CcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-
Q 011057 192 PVKAVEMVD----ENTICVAAILGST-LNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW- 261 (494)
Q Consensus 192 ~~~L~~~i~----~~t~~vv~~~~~~-~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~- 261 (494)
+++|++++. .+..+.+++.|.. ..|.+.+ +++|.++|+++ ++++++|++|+++.. .......
T Consensus 184 ~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~------~~~lI~Dev~~g~g~--~g~~~~~~ 255 (425)
T PRK08088 184 IASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEH------GIMLIADEVQTGAGR--TGTLFAME 255 (425)
T ss_pred HHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CcchhHHh
Confidence 456888775 1223334444443 4365555 89999999999 999999999986421 1111111
Q ss_pred cccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHH
Q 011057 262 DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYR 341 (494)
Q Consensus 262 ~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~ 341 (494)
..+. ..|.. ++.|.+.++..+|+++.+.. .. +.+.. .....+ ...+.....+..+.|+.+.. +
T Consensus 256 ~~~~-~pdi~--s~sK~l~~G~rig~v~~~~~-~~-~~~~~-------~~~~~t--~~~~~~~~~a~~~~l~~~~~---~ 318 (425)
T PRK08088 256 QMGV-AADLT--TFAKSIAGGFPLAGVTGRAE-VM-DAIAP-------GGLGGT--YAGNPIACAAALAVLKVFEQ---E 318 (425)
T ss_pred hcCC-CCCEE--EEeccccCCCcceeeEecHH-HH-hhcCC-------CCCCCC--CCcCHHHHHHHHHHHHHHHh---c
Confidence 1111 24544 44698887788899987532 21 11110 001111 11222233333334443322 3
Q ss_pred HHHHHHHHHHHHHHHHHhh----CCCeEEeecCCCccEEEEEecCC------CCCCHHHHHHHHHhcCceeeccccCCCC
Q 011057 342 NVMENCHENAMVLKEGLEK----TGRFNIVSKDEGVPLVAFSLKDN------KRHDEFEVAELLRRFGWIVPAYTMPADA 411 (494)
Q Consensus 342 ~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~~v~f~~~~~------~~~~~~~l~~~L~~~Gi~v~~~~~~~~~ 411 (494)
+..++..+..+++++.|.+ .|.+..+.. ...++.+.+... .......+.+.+.++|+.+... .
T Consensus 319 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g--~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~----~- 391 (425)
T PRK08088 319 NLLQKANALGEKLKDGLLAIAEKHPEIGDVRG--LGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSC----G- 391 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEec--cceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecC----C-
Confidence 4455555555555555543 342222222 234556666221 1122567889999999875321 1
Q ss_pred CCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 412 QHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 412 ~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
.....+|++....++.++++..++.|+++++.+
T Consensus 392 ~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 392 PYYNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred CCCCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 113579999988889999999999999988764
No 345
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.51 E-value=2.7e-11 Score=123.02 Aligned_cols=350 Identities=11% Similarity=-0.039 Sum_probs=195.0
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++........ ....+...++.+.|+++...+. ..+.++++|+|
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGse 111 (422)
T PRK05630 38 DGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFG-GLTHEPAIKLTRKLLNLTDNGL-----DHVFYSDSGSV 111 (422)
T ss_pred CCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccC-CcCCHHHHHHHHHHHhhCCCCc-----CEEEEeCCcHH
Confidence 56665544432 22355789999998888753221110 0122334457777888764221 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC-------------eeEEEeccCCccccC---
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLSEGYYVMD--- 191 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~~d--- 191 (494)
|+..|++.++..+..+ |.. .+.+|+ .....|....-+....+- .+..+|.... ...+
T Consensus 112 A~e~AlklAr~~~~~~----g~~-~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~ 185 (422)
T PRK05630 112 SVEVAIKMALQYSKGQ----GHP-ERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV-RGSSPQE 185 (422)
T ss_pred HHHHHHHHHHHHHHhc----CCC-CCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcc-cCCChHH
Confidence 9999999997653211 111 124454 566677644333333221 1233332211 0111
Q ss_pred ----HHHHHHhhhhCCeEEEEeeC-CCCcccc----cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-
Q 011057 192 ----PVKAVEMVDENTICVAAILG-STLNGEF----EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW- 261 (494)
Q Consensus 192 ----~~~L~~~i~~~t~~vv~~~~-~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~- 261 (494)
.+.+++.+.++..+|++--. ....|.+ +.+++|.++|++| |+++++|+++.++-- .......
T Consensus 186 ~~~~~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~------g~llI~DEv~tG~Gr--tG~~~a~~ 257 (422)
T PRK05630 186 ISEYLRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKH------DILLIADEIATGFGR--TGELFATL 257 (422)
T ss_pred HHHHHHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc------CCEEEEecceeCCCc--CchhhHHH
Confidence 24455555555555554432 3344554 4589999999999 999999999965411 1111011
Q ss_pred cccCCCceEEEEcCcccCCcC-CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHH
Q 011057 262 DFRLPLVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGY 340 (494)
Q Consensus 262 ~~~~~~~D~~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~ 340 (494)
.+++ ..|.+++ -|.+.++ ..+|+++++++ .. +.+...... +...-..+ +..++....+..++|+.+.++.
T Consensus 258 ~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~-i~-~~~~~~~~~-~~~~h~~T--~~g~Pla~aaa~aaL~~l~~~~- 328 (422)
T PRK05630 258 AAGV-TPDIMCV--GKALTGGFMSFAATLCTDK-VA-QLISTPNGG-GALMHGPT--FMANPLACAVAHASLEIIETGM- 328 (422)
T ss_pred hcCC-CCCeeee--echhhcCccccceeeccHH-HH-HHHhccCCC-CccccCCC--CcCCHHHHHHHHHHHHHHHhCc-
Confidence 1122 3677754 5887554 24566665543 21 221100000 00000111 2233355566667777776553
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEeecC-CCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEE
Q 011057 341 RNVMENCHENAMVLKEGLEKTGRFNIVSKD-EGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRV 419 (494)
Q Consensus 341 ~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRv 419 (494)
..++..++.++|++.|+++.....+.+- ....++.+.+..+ .+...+.+.+.++|+++.. .+ .++|+
T Consensus 329 --~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~--~~~~~~~~~~~~~Gl~~~~-------~g-~~l~~ 396 (422)
T PRK05630 329 --WRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQP--VDMEEATQAAVDHGVWLRP-------FG-RLVYV 396 (422)
T ss_pred --HHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCc--ccHHHHHHHHHHCCeEEEe-------cC-CEEEE
Confidence 4557778888888877754322222221 1345677777432 2356888999999998643 12 47898
Q ss_pred EeccCCChHHHHHHHHHHHHHHHH
Q 011057 420 VIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 420 s~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
.-...+|++++|.+++.|+++++.
T Consensus 397 ~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 397 MPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred ECCccCCHHHHHHHHHHHHHHHhc
Confidence 877788999999999999988754
No 346
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.50 E-value=5.6e-11 Score=121.02 Aligned_cols=340 Identities=13% Similarity=-0.007 Sum_probs=190.6
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCC-CCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVD-MDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.+++.... ...++ .+...++.+.|++++.... .....|+++|+
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~--~~~~~~la~~l~~~~p~~~----~~~~~f~~sGs 111 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVP--YASYVTLAERINALAPIDG----PAKTAFFTTGA 111 (421)
T ss_pred CCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccC--ChHHHHHHHHHHHhCCCCC----CceEEEeCCcH
Confidence 56655544443 23356788999998888763221 11111 2233356677888764311 12488999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCCe-------------eEEEeccCCc----cc
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEVE-------------LKEVKLSEGY----YV 189 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~~-------------v~~v~~~~~~----~~ 189 (494)
||+..|++.++... | +.+|+ .....|....-+....|.. +..++..+.. ..
T Consensus 112 eA~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 180 (421)
T PRK06777 112 EAVENAVKIARAYT-------G----RPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVE 180 (421)
T ss_pred HHHHHHHHHHHHhh-------C----CCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHH
Confidence 99999999997531 1 23454 4556776554444333311 1222222110 01
Q ss_pred cCHHHHHHhhhh-----CCeEEEEeeCCCCcccc-cC---HHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc
Q 011057 190 MDPVKAVEMVDE-----NTICVAAILGSTLNGEF-ED---VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE 260 (494)
Q Consensus 190 ~d~~~L~~~i~~-----~t~~vv~~~~~~~tG~~-~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~ 260 (494)
.+++.+++.+.. +..+|++.-.....|.. .| +++|.++|+++ |+++++|++|.++.. ......
T Consensus 181 ~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tg~gr--~g~~~~ 252 (421)
T PRK06777 181 EALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEH------GILLIADEVQTGFAR--TGKLFA 252 (421)
T ss_pred HHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCcc--CCchhh
Confidence 235667777752 23455544444455643 34 89999999999 999999999986421 111101
Q ss_pred -ccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhH
Q 011057 261 -WDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEG 339 (494)
Q Consensus 261 -~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g 339 (494)
..+++ ..|.++ ..|.+.+++.+|+++.++. .. +.+.. . ....++ ..++....+..++|+.+.+
T Consensus 253 ~~~~~~-~pDiv~--~sK~l~~G~pigav~~~~~-i~-~~~~~---~----~~~~T~--~~~p~~~aaa~a~L~~~~~-- 316 (421)
T PRK06777 253 MEYYDV-KPDLIT--MAKSLGGGMPISAVVGRAE-VM-DAPAP---G----GLGGTY--AGNPLAVAAALAVLDVIAE-- 316 (421)
T ss_pred hhhcCC-CCCEEe--eehhhcCCCceEEEEEcHH-HH-hccCC---C----CCCCCC--CcCHHHHHHHHHHHHHHHh--
Confidence 11121 357664 4587777777899887642 22 21110 0 001122 2223444555566655544
Q ss_pred HHHHHHHHHHHHHHHHHHHhhC----CCeEEeecCCCccEEEEEecCC-CCCC----HHHHHHHHHhcCceeeccccCCC
Q 011057 340 YRNVMENCHENAMVLKEGLEKT----GRFNIVSKDEGVPLVAFSLKDN-KRHD----EFEVAELLRRFGWIVPAYTMPAD 410 (494)
Q Consensus 340 ~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~~v~f~~~~~-~~~~----~~~l~~~L~~~Gi~v~~~~~~~~ 410 (494)
++..++..++.++|.++|+++ +.+.-+. + ...++.+.+..+ ...+ ...+.+.+.++|+++.. ..
T Consensus 317 -~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr-g-~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~----~~ 389 (421)
T PRK06777 317 -EKLCQRALILGAHLVEVLEKAKASCPAIVDIR-A-RGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLS----CG 389 (421)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEec-C-ceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEee----cC
Confidence 356777888888888888775 3222221 2 344555555322 1111 23456667889998632 11
Q ss_pred CCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 411 AQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 411 ~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
.. ..++|++.....++++++..++.|++++
T Consensus 390 ~~-g~~lr~~ppl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 390 VH-GNVIRFLYPLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred CC-CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 11 2579998766789999998888887765
No 347
>PRK07481 hypothetical protein; Provisional
Probab=99.50 E-value=4.4e-11 Score=122.56 Aligned_cols=357 Identities=14% Similarity=0.061 Sum_probs=191.4
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++.............+.+.++.++|+++++-+. ...+.++++|+|
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~----~~~v~f~~sGsE 115 (449)
T PRK07481 40 DGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEG----MRRVFFSSGGSD 115 (449)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCC----CCEEEEcCchHH
Confidence 56655544332 2335578898999888775322111001122344557777888874211 124899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCC---ccc-cC
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEG---YYV-MD 191 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~---~~~-~d 191 (494)
|+..|++.++..+.. .|. ..+.+|+ +....|....-+....|- .+..++.... .+. .|
T Consensus 116 Ave~AlklAr~~~~~----~g~-~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d 190 (449)
T PRK07481 116 SVETALKLARQYWKV----RGQ-PERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQD 190 (449)
T ss_pred HHHHHHHHHHHHHHh----cCC-CCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCC
Confidence 999999999765321 111 1123454 455567644333222211 1233322110 011 13
Q ss_pred HHH--------HHHhhh----hCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEeccccccccccc
Q 011057 192 PVK--------AVEMVD----ENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL 255 (494)
Q Consensus 192 ~~~--------L~~~i~----~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (494)
.++ +++.+. ++..+|++--.....|.+.| +++|.++|+++ |+++++|+++.++.- .
T Consensus 191 ~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~------g~llI~DEV~tGfGR--t 262 (449)
T PRK07481 191 PEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRH------GILLIADEVVTGFGR--T 262 (449)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHc------CCEEEEeehhhCcCc--C
Confidence 333 344443 23455555444445566644 89999999999 999999999876421 1
Q ss_pred CCcccc-cccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHH
Q 011057 256 YPELEW-DFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLI 333 (494)
Q Consensus 256 ~~~~~~-~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~ 333 (494)
...... .+++ ..|.+++ -|.+.++. .+|.++++++ .. +.+.......+...-..|+ ..++....+..++|+
T Consensus 263 G~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~h~~T~--~gnpl~~aaa~a~L~ 335 (449)
T PRK07481 263 GSWFGSRGWGV-KPDIMCL--AKGITSGYVPLGATMVNAR-IA-DAFEANADFGGAIMHGYTY--SGHPVACAAALATLD 335 (449)
T ss_pred chhhHhhhcCC-CCCEEEE--eecccCCCcCceEEEEcHH-HH-HHHhccCccccccccCCCC--CCCHHHHHHHHHHHH
Confidence 100000 1222 3688776 48776552 5677777653 21 2111110000000001121 222344555666677
Q ss_pred HhcHhHHHHHHHHHHHHHHHHHHHHhhCCC-eEEeecCC-CccEEEEEecCCC----CCC-----HHHHHHHHHhcCcee
Q 011057 334 RLGFEGYRNVMENCHENAMVLKEGLEKTGR-FNIVSKDE-GVPLVAFSLKDNK----RHD-----EFEVAELLRRFGWIV 402 (494)
Q Consensus 334 ~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~~~~~-~~~~v~f~~~~~~----~~~-----~~~l~~~L~~~Gi~v 402 (494)
.+.++ +..++..++.++|.+.|+++-. +.++..-. ...++.+.+.... ..+ ...+.+.+.++|+++
T Consensus 336 ~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~ 412 (449)
T PRK07481 336 IVVRE---DLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLV 412 (449)
T ss_pred HHHhh---hHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEE
Confidence 66554 3556667777777777766521 22222211 2345556653211 011 346778889999986
Q ss_pred eccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 403 PAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 403 ~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
.. .+ ..+|++-...+|++|+|.+++.|+++++++
T Consensus 413 ~~-------~g-~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 413 RP-------SG-TKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred Ee-------cC-CEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 33 12 247877656679999999999999988764
No 348
>PRK07036 hypothetical protein; Provisional
Probab=99.50 E-value=7.8e-11 Score=121.10 Aligned_cols=355 Identities=15% Similarity=0.036 Sum_probs=195.0
Q ss_pred hcCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++ .-.+.+|.+.+++.+.++.............+.+.++.+.|++++..+. ..+.|+++|+
T Consensus 48 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGs 122 (466)
T PRK07036 48 ADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDL-----NHVFLTTGGS 122 (466)
T ss_pred CCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCch
Confidence 356665544332 2335578999999888765321111100223444557777888763221 3589999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCC---cccc-
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEG---YYVM- 190 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~---~~~~- 190 (494)
||+..|++.++..+..+ |.. .+.+|+ .....|....-+....|- .+..++.... ...+
T Consensus 123 eAve~AlklAr~~~~~~----g~t-~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 197 (466)
T PRK07036 123 TAVDSALRFVHYYFNVR----GRP-AKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMS 197 (466)
T ss_pred HHHHHHHHHHHHHHHhc----CCC-CccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCC
Confidence 99999999987543111 110 123454 455567654333332221 1333332110 0011
Q ss_pred -------CHHHHHHhhhh----CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccc-ccc-
Q 011057 191 -------DPVKAVEMVDE----NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGF-IAP- 253 (494)
Q Consensus 191 -------d~~~L~~~i~~----~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~-~~~- 253 (494)
..+.+++.+.. +..+|++--.....|.+.| +++|.++|++| |+++++|+++.++ -..
T Consensus 198 ~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~------g~llI~DEV~tGfGRtG~ 271 (466)
T PRK07036 198 EAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRY------DILYISDEVVTGFGRLGH 271 (466)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeechhCCCcCch
Confidence 12445555542 3445555444445577766 89999999999 9999999999664 211
Q ss_pred ccCCcccccccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccccccccCCCCC--CCCCcccccCcchHHHHHHHH
Q 011057 254 FLYPELEWDFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGA--DQPTFTLNFSKGSSQVIAQYY 330 (494)
Q Consensus 254 ~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~--~~~~~~~~~s~~~~~~~a~~~ 330 (494)
+.. ....+++ ..|.+++ -|.+.++. .+|.++++++ .. +.+.. .+... .....++ +.++....+..+
T Consensus 272 ~~~--~~~~~gv-~PDivt~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~--~~~~~~~~~~~~T~--~gnpl~~aaa~a 340 (466)
T PRK07036 272 FFA--SEAVFGI-QPDIITF--AKGLTSGYQPLGAVIISER-LL-DVISG--PNAKGNVFTHGFTY--SGHPVACAAALK 340 (466)
T ss_pred hhh--hhhhcCC-CCCEEEE--ccccccCccccEEEEEcHH-HH-HHHhc--ccCcCcccccCCCC--CCCHHHHHHHHH
Confidence 000 0101222 3687765 48776552 5777776543 22 21111 00000 0001122 223344555666
Q ss_pred HHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-CccEEEEEecCCCC------CC---HHHHHHHHHhcCc
Q 011057 331 QLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GVPLVAFSLKDNKR------HD---EFEVAELLRRFGW 400 (494)
Q Consensus 331 al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~------~~---~~~l~~~L~~~Gi 400 (494)
.|+.+.++ +..++..++.++|++.|+++....++..-. ...++.+.+..... .+ ...+.+.+.++|+
T Consensus 341 ~Le~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv 417 (466)
T PRK07036 341 NIEIMERE---GLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGL 417 (466)
T ss_pred HHHHHHhC---CHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCc
Confidence 66666544 466777788888888887653222222211 23455666632110 11 2467788899999
Q ss_pred eeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 401 IVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 401 ~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
++.. .+ ..+|++....+|++|||.+++.|+++++.+
T Consensus 418 l~~~-------~~-~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 418 LVRP-------LE-HLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred EEee-------cC-CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 8632 12 357777656679999999999999998876
No 349
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.49 E-value=7.5e-11 Score=120.76 Aligned_cols=347 Identities=9% Similarity=0.036 Sum_probs=195.4
Q ss_pred hcCCCCCcccccc----cCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASFV----TTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++. -.+.+|.+.+++.+.++........ ....+...++.+.|++++..... ......++++|+
T Consensus 36 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~~--~~~~~f~~~sGs 112 (442)
T TIGR00709 36 VEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTL-DLTTPLKDAFIEALLNIIPKRKM--DYKLQFPGPSGA 112 (442)
T ss_pred CCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCcccc-ccCcHHHHHHHHHHHHhCCCcCC--CccEEEeCCCHH
Confidence 3566665444432 2355789999998888753321111 12234445577788888743210 001244468999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCCcccc----
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEGYYVM---- 190 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~~~---- 190 (494)
||+..|++.++.. .| +.+|+ .....|....-+....|. .+..++... ....
T Consensus 113 EA~e~AlklAr~~-------tg----r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 180 (442)
T TIGR00709 113 DAVEAAIKLAKTY-------TG----RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPH-EYRCPFGI 180 (442)
T ss_pred HHHHHHHHHHHHh-------cC----CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCc-cccccccC
Confidence 9999999999764 12 24454 455677655444443331 133333321 1111
Q ss_pred ----CH----HHHHHhhh------hCCeEEEEeeCCCCccccc----CHHHHHHHHHHhhcccCCCceEEEecccccccc
Q 011057 191 ----DP----VKAVEMVD------ENTICVAAILGSTLNGEFE----DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIA 252 (494)
Q Consensus 191 ----d~----~~L~~~i~------~~t~~vv~~~~~~~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~ 252 (494)
+. +.+++.+. .+..+|++.......|.+. =+++|.++|++| |++++.|+++.++.-
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~------g~llI~DEV~tGfGR 254 (442)
T TIGR00709 181 GGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKH------DIKLILDEVQAGFGR 254 (442)
T ss_pred CchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCC
Confidence 11 12333342 2345555554444556552 278999999999 999999999986521
Q ss_pred cccCCcccc-cccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 253 PFLYPELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 253 ~~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
...-... .+++ ..|.+++ .|.+.++..+|+++.+++ . ..+ ..... ..+ +..++....+..++
T Consensus 255 --tG~~~a~~~~gv-~PDiv~~--gK~l~~G~Pigav~~~~~-~--~~~--~~~~~-----~~T--~~gnpla~aaa~a~ 317 (442)
T TIGR00709 255 --SGTMFAFEHAGI-EPDFVVM--SKAVGGGLPLAVLLIAPE-F--DAW--QPAGH-----TGT--FRGNQLAMVTGTEA 317 (442)
T ss_pred --CCchhHHHHcCC-CCcEEEE--cccccCCcccEEEEEchH-H--hcc--CCCcC-----CCC--CCcCHHHHHHHHHH
Confidence 1110110 1222 3687774 487766677898887654 2 111 00000 111 22223444555666
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEeecCC-CccEEEEEecCCCC-------C-----CHHHHHHHHHh
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLEKTG-RFNIVSKDE-GVPLVAFSLKDNKR-------H-----DEFEVAELLRR 397 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~~-------~-----~~~~l~~~L~~ 397 (494)
|+.+.+++ ..++..++.++|.+.|+++- .+.++.+-. ...++.+.+..... . -...+...+.+
T Consensus 318 L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (442)
T TIGR00709 318 LNYWKDDN---LAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFE 394 (442)
T ss_pred HHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHH
Confidence 66665543 45577777788888887642 122222211 33456666632110 0 13467778889
Q ss_pred cCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 398 FGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 398 ~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
+|+++... .....++|+.....+|+++++.+++.++++++++
T Consensus 395 ~Gvl~~~~-----~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 395 NGLLLETG-----GREGEVFRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred CCeEEeec-----CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99986321 1124579999888899999999999999998765
No 350
>PRK07480 putative aminotransferase; Validated
Probab=99.49 E-value=4.7e-11 Score=122.32 Aligned_cols=355 Identities=15% Similarity=0.025 Sum_probs=192.9
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++........+....+.+.++.+.|++++..+. ..+.++++|+|
T Consensus 48 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGse 122 (456)
T PRK07480 48 EGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGF-----NHVFFTNSGSE 122 (456)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHH
Confidence 56665544442 2334578899999888876332111111223445557777888874321 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEe-CCCcchHHHHHHHHcCCe------------eEEEeccCC---ccccC-
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIVT-GANVQVCWEKFARYFEVE------------LKEVKLSEG---YYVMD- 191 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~~------------v~~v~~~~~---~~~~d- 191 (494)
|+..|++.++..+..+ |.. .+.+|+. ....|....-+....|.. +..++.... ....+
T Consensus 123 A~e~AlklAr~~~~~~----g~~-~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 197 (456)
T PRK07480 123 ANDTVLRMVRHYWALK----GKP-QKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTP 197 (456)
T ss_pred HHHHHHHHHHHHHHhc----CCC-CCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCCh
Confidence 9999999997643211 111 1234543 455676443332222211 122221100 00011
Q ss_pred -------HHHHHHhhh----hCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccC
Q 011057 192 -------PVKAVEMVD----ENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLY 256 (494)
Q Consensus 192 -------~~~L~~~i~----~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~ 256 (494)
.+.|++.+. ++..+|++--.....|.+.| +++|.++|++| |+++++|+++.++.- ..
T Consensus 198 ~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~------g~llI~DEV~tGfGR--tG 269 (456)
T PRK07480 198 EEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKY------DILLVADEVICGFGR--TG 269 (456)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--Cc
Confidence 256665553 23445554433334577655 89999999999 999999999966411 11
Q ss_pred Ccccc-cccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHH
Q 011057 257 PELEW-DFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIR 334 (494)
Q Consensus 257 ~~~~~-~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~ 334 (494)
..... .+++ ..|.+++ -|.+.++. .+|.++.+++ .. +.+....... ....| ++.++....+..++|+.
T Consensus 270 ~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~---~~~~T--~~gnpl~~Aaa~a~L~~ 339 (456)
T PRK07480 270 EWFGSQHFGI-KPDLMTI--AKGLTSGYIPMGAVGVGDR-VA-EVLIEEGGEF---NHGFT--YSGHPVAAAVALANLRI 339 (456)
T ss_pred chhhhhhcCC-CCCeeee--ehhhccCCccceEEEEcHH-HH-HHHhcCCCCc---ccCCC--CCcCHHHHHHHHHHHHH
Confidence 10011 1222 3677765 48765542 4677776543 22 2211000100 01112 22334555666777777
Q ss_pred hcHhHHHHHHHHH-HHHHHHHHHHHhhCCCeEEeecCC-CccEEEEEecCCCC----C-C----HHHHHHHHHhcCceee
Q 011057 335 LGFEGYRNVMENC-HENAMVLKEGLEKTGRFNIVSKDE-GVPLVAFSLKDNKR----H-D----EFEVAELLRRFGWIVP 403 (494)
Q Consensus 335 l~~~g~~~~~~~~-~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~----~-~----~~~l~~~L~~~Gi~v~ 403 (494)
+.+++ ..++. .++.++|.+.|+++....++..-. ...++.+.+..... . + ...+.+++.++|+++.
T Consensus 340 l~~~~---l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~ 416 (456)
T PRK07480 340 LRDEG---IVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMR 416 (456)
T ss_pred HHhCC---HHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEe
Confidence 76554 44555 356666666666542222221111 23455566532110 0 1 2457778899999863
Q ss_pred ccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 404 AYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 404 ~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
. .+ ..+|++....+|++++|.+++.|+++++++.+
T Consensus 417 ~-------~~-~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 417 A-------VG-DRMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred e-------cC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2 11 36888877677999999999999999988744
No 351
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.49 E-value=7.2e-11 Score=121.21 Aligned_cols=356 Identities=13% Similarity=0.020 Sum_probs=199.4
Q ss_pred hcCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++ .-.+.+|.+.+++.+.++.-..... .....+...++.+.|++++..+. ..+.++++|+
T Consensus 44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~-~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGs 117 (466)
T PRK07030 44 FEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVIL-AGFSHEPVIELSERLVKITPPGL-----SRCFYADNGS 117 (466)
T ss_pred CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccc-cccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcH
Confidence 356666554443 2335578899999888876322111 11223444557777888764221 3589999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCC---cc---
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEG---YY--- 188 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~---~~--- 188 (494)
||+..|++.++..+..+ |.. .+.+|+ .....|....-+....|. .+..+|.... ..
T Consensus 118 EAve~AlKlAr~~~~~~----g~t-~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~ 192 (466)
T PRK07030 118 SAIEVALKMSFHYWRNR----GKP-RKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMS 192 (466)
T ss_pred HHHHHHHHHHHHHHHHh----CCC-CCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCC
Confidence 99999999997653221 110 123444 555677654444433332 1223332210 00
Q ss_pred -----ccCHHHHHHhhhh---CCeEEEEee-CCCCcccccC----HHHHHHHHHHhhcccCCCceEEEeccccccccccc
Q 011057 189 -----VMDPVKAVEMVDE---NTICVAAIL-GSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL 255 (494)
Q Consensus 189 -----~~d~~~L~~~i~~---~t~~vv~~~-~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (494)
.-+++.+++.+.. +..+|++-- .....|.+.| +++|.++|+++ |+++++|+++.++-- .
T Consensus 193 ~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~------g~llI~DEV~TGfGR--t 264 (466)
T PRK07030 193 WEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRY------GVHLIHDEIAVGFGR--T 264 (466)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhCcCc--c
Confidence 1134667777753 334444432 2344466533 78999999999 999999999876421 1
Q ss_pred CCcccc-cccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHH
Q 011057 256 YPELEW-DFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLI 333 (494)
Q Consensus 256 ~~~~~~-~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~ 333 (494)
..-... .+++ ..|.+++ -|.+.++. .+|.++.+++ .. +.+.....-.+...-..| ++.++....+..+.|+
T Consensus 265 G~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~e-i~-~~~~~~~~~~~~~~h~~T--~~gnpla~aaa~a~L~ 337 (466)
T PRK07030 265 GTMFACEQAGI-RPDFLCL--SKALTGGYLPLAAVLTTDT-VY-QAFYDDYPTLRAFLHSHS--YTGNPLACAAALATLD 337 (466)
T ss_pred ccchHHHhcCC-CCCEEee--ehhccCCcccceEEEecHH-HH-HHHhcccccccccccCCC--CCCCHHHHHHHHHHHH
Confidence 110000 1122 3788876 48776653 5777776543 21 111100000000000111 2223344555666777
Q ss_pred HhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-CccEEEEEecCCCC----C--C---HHHHHHHHHhcCceee
Q 011057 334 RLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GVPLVAFSLKDNKR----H--D---EFEVAELLRRFGWIVP 403 (494)
Q Consensus 334 ~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~----~--~---~~~l~~~L~~~Gi~v~ 403 (494)
.+.++. ..++..++.++|.+.|+++.....+.+-. ...++.+.+..... . + ...+.+++.++|+++.
T Consensus 338 ~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~ 414 (466)
T PRK07030 338 IFEQDN---VIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLR 414 (466)
T ss_pred HHHhcC---HHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEE
Confidence 776553 56777788888888887753222222111 23455666632110 0 1 2467888999999863
Q ss_pred ccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 404 AYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 404 ~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
. .+ ..+|+.....+|++|++.+++.|+++++++
T Consensus 415 ~-------~g-~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 415 P-------LG-SVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred e-------cC-CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 2 12 368888777889999999999999999988
No 352
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.49 E-value=4.9e-11 Score=122.12 Aligned_cols=354 Identities=12% Similarity=0.012 Sum_probs=197.8
Q ss_pred hcCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++ .-.+.+|.+.+++.+.++....... .....+...++.+.|+++++.+. ..+.|+++|+
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~sGs 124 (453)
T PRK06943 51 RDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAML-AGCTHEPAIELAERLAALTGGTL-----GHAFFASDGA 124 (453)
T ss_pred CCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCCH
Confidence 356666554443 2335678999999888876322111 11122334457777888765321 2489999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCCcc------
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEGYY------ 188 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~------ 188 (494)
||+..|++.++..+..+ |.. .+.+|+ .....|....-+....|- .+..++.....+
T Consensus 125 eAve~AlKlA~~~~~~r----g~~-~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 199 (453)
T PRK06943 125 SAVEIALKMSFHAWRNR----GRG-DKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGET 199 (453)
T ss_pred HHHHHHHHHHHHHHHHh----CCC-CCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCC
Confidence 99999999997754322 111 124454 455567644333332221 123343221000
Q ss_pred -----ccCHHHHHHhhhh---CCeEEEEeeC--CCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 189 -----VMDPVKAVEMVDE---NTICVAAILG--STLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 189 -----~~d~~~L~~~i~~---~t~~vv~~~~--~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
.-+++++++.+.. +..+|++ .| ....|.+.| ++++.++|++| |+++|+|+++.++--
T Consensus 200 ~~~~~~~~~~~l~~~l~~~~~~iAAvii-EPvvqg~gG~~~~~~~yl~~lr~lc~~~------gillI~DEV~TG~GR-- 270 (453)
T PRK06943 200 AADVAARALADVRRLFAERAGKIAALIV-EPLVQCAAGMAMHDPSYLRGLRALCDRY------GVHLIADEIAVGCGR-- 270 (453)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEE-eccccccCCcccCCHHHHHHHHHHHHHc------CCEEEeechhhCCCC--
Confidence 1134677777753 3344444 44 345566532 78999999999 999999999976411
Q ss_pred cCCcccc-cccCCCceEEEEcCcccCCcC-CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELEW-DFRLPLVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~~-~~~~~~~D~~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
...-... .+++ ..|.+++. |.+.++ ..+|.++.+++ .. +.+..... .....-..+ +..++....+..+.|
T Consensus 271 tG~~fa~~~~gv-~PDivt~g--Kgl~gG~~Pi~av~~~~e-i~-~~~~~~~~-~~~~~~~~T--~~gnpl~~aaa~a~L 342 (453)
T PRK06943 271 TGTFFACEQAGV-WPDFLCLS--KGISGGYLPLSLVLSRDA-IF-AAFYDDDV-TRGFLHSHS--YTGNPLACRAALATL 342 (453)
T ss_pred CcchhHHHhCCC-CCCeEeee--hhhccCcccceEEEEcHH-HH-HhhcccCc-cCCccCCCC--CCCCHHHHHHHHHHH
Confidence 1111111 1222 47888764 877665 35777777653 21 11111000 000000111 122334455566667
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-CccEEEEEecCCCCCC---HHHHHHHHHhcCceeeccccC
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GVPLVAFSLKDNKRHD---EFEVAELLRRFGWIVPAYTMP 408 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~~~---~~~l~~~L~~~Gi~v~~~~~~ 408 (494)
+.+.+++ ..++..++.++|.+.|+++.....+.+-. ...++.+.+......+ ...+.+++.++|+++..
T Consensus 343 ~~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~---- 415 (453)
T PRK06943 343 DLFAEDD---VLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRP---- 415 (453)
T ss_pred HHHHhcC---HHHHHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEe----
Confidence 7666543 45666777777777777652211121111 2345566664211111 34678889999998632
Q ss_pred CCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 409 ADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 409 ~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
.+ ..+|++....+|++++|.+++.|+++++++
T Consensus 416 ---~g-~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 416 ---IG-TTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred ---cC-CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 12 358888667789999999999999999876
No 353
>PRK06917 hypothetical protein; Provisional
Probab=99.49 E-value=5.6e-11 Score=121.58 Aligned_cols=362 Identities=12% Similarity=0.018 Sum_probs=198.5
Q ss_pred hcCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++ .-.+.+|.+.+++.+.++....... +....+.+.++.+.|++++.... ..+.|+++|+
T Consensus 28 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGs 101 (447)
T PRK06917 28 QNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYR-SQFTSEPAEKLAKKLSDLSPGDL-----NWSFFVNSGS 101 (447)
T ss_pred CCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCChH
Confidence 356666544433 2335579999999888876422211 11223445567888888774321 3588999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCC-cc-----
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEG-YY----- 188 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~-~~----- 188 (494)
||+..|++.++..+..+ |. ..+.+|+ +....|....-+....|. .+..++.... ..
T Consensus 102 EAve~AlklAr~~~~~r----g~-t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 176 (447)
T PRK06917 102 EANETAMKIAIQHFQER----GI-QGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKV 176 (447)
T ss_pred HHHHHHHHHHHHHHHhc----CC-CCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCC
Confidence 99999999997754321 11 1124454 345567644444333331 1122221100 00
Q ss_pred -----ccCHHHHHHhhhh----CCeEEEEeeCCCCc-ccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 189 -----VMDPVKAVEMVDE----NTICVAAILGSTLN-GEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 189 -----~~d~~~L~~~i~~----~t~~vv~~~~~~~t-G~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
.-+++.+++.++. +..+|++--..... |.+.| +++|.++|+++ |+++++|+++.++.-
T Consensus 177 ~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~------g~llI~DEv~tGfGR-- 248 (447)
T PRK06917 177 YPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHY------DILFIADEVMTGLGR-- 248 (447)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHc------CCEEEEechhhCcCc--
Confidence 0124566777753 23444443222223 34422 78999999999 999999999976411
Q ss_pred cCCccc-ccccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 255 LYPELE-WDFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 255 ~~~~~~-~~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
...... ..+++ ..|.+++ -|.+.++. .+|+++.+++ .. +.+........ -..| ++.++....+..++|
T Consensus 249 tG~~~a~~~~gv-~PDi~~~--gK~l~~G~~Pi~a~~~~~~-i~-~~~~~~~~~~~---~~~T--~~gnpl~~aaa~a~l 318 (447)
T PRK06917 249 TGAMFAMEHWGV-EPDIMTL--GKGLGAGYTPIAATVVSDR-VM-EPILRGSRSIM---SGHT--LSANPLSAATALAVL 318 (447)
T ss_pred ccchhhHHhcCC-CCCEEEe--eehhccCCcceEEEEEcHH-HH-HHHhccCcccc---cccC--CCCCHHHHHHHHHHH
Confidence 111111 11222 3677765 48876653 4677766542 22 11111110000 0011 222334556666777
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCC-eEEeecCC-CccEEEEEecCCC----CC-----CHHHHHHHHHhcCce
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTGR-FNIVSKDE-GVPLVAFSLKDNK----RH-----DEFEVAELLRRFGWI 401 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~~~~~-~~~~v~f~~~~~~----~~-----~~~~l~~~L~~~Gi~ 401 (494)
+.+.++ +..++..++.++|++.|+++.. +.++..-. ...++.+.+.... .. -...+.+.+.++|++
T Consensus 319 ~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl 395 (447)
T PRK06917 319 EYMEKH---NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLL 395 (447)
T ss_pred HHHHHC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcE
Confidence 776554 3566777777888888776521 22222211 2335555553210 00 145678888999998
Q ss_pred eeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 402 VPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 402 v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
+..........+...+|++....+|++|+|.+++.|+++++++.
T Consensus 396 ~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 439 (447)
T PRK06917 396 LYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMM 439 (447)
T ss_pred EEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 74321100111245788887767899999999999999998773
No 354
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.48 E-value=6.5e-11 Score=121.55 Aligned_cols=355 Identities=13% Similarity=0.047 Sum_probs=199.5
Q ss_pred hcCCCCCcccccc----cCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASFV----TTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++. -.+.+|.+.+++.+.++.-..... .....+.+.++.+.|++++.... ..+.++++|+
T Consensus 53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~-~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGs 126 (460)
T PRK06916 53 VNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTL-LGLANVPSILLAEKLIEVVPEGL-----KKVFYSDSGA 126 (460)
T ss_pred CCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcH
Confidence 3566666544432 235678999999888876322111 11123344557777888764321 2489999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCC---cc---
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEG---YY--- 188 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~---~~--- 188 (494)
||+..|++.++..+..+ |.. .+.+|+ +....|....-+....|- .+..+|.... .+
T Consensus 127 eAve~AlklAr~~~~~~----g~t-gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~ 201 (460)
T PRK06916 127 TAVEIAIKMAFQYWQNK----GKP-KKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGND 201 (460)
T ss_pred HHHHHHHHHHHHHHHhc----CCC-CCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCC
Confidence 99999999997643211 111 123444 566677755444443331 1233332110 00
Q ss_pred -----ccCHHHHHHhhhh---CCeEEEEee-CCCCcccccC----HHHHHHHHHHhhcccCCCceEEEeccccccccccc
Q 011057 189 -----VMDPVKAVEMVDE---NTICVAAIL-GSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL 255 (494)
Q Consensus 189 -----~~d~~~L~~~i~~---~t~~vv~~~-~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (494)
.-+++.+++.++. +..+|++-- .....|.+.| +++|.++|+++ |+++++|+++.++-- .
T Consensus 202 ~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~------g~llI~DEV~TG~GR--t 273 (460)
T PRK06916 202 KAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKY------NVLFITDEVATGFGR--T 273 (460)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHc------CCEEEeechhhCCCc--C
Confidence 1235667777752 334444432 2444465522 78999999999 999999999866411 1
Q ss_pred CCcccc-cccCCCceEEEEcCcccCCcC-CceEEEEEeCCCCcccccccccCCC--CCCCCCcccccCcchHHHHHHHHH
Q 011057 256 YPELEW-DFRLPLVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYL--GADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 256 ~~~~~~-~~~~~~~D~~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~y~--~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
...... .+++ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+. ..+. .......++ +.++....+..++
T Consensus 274 G~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~e-i~-~~~~--~~~~~~~~~~~~~T~--~gnpl~~aaa~a~ 344 (460)
T PRK06916 274 GKMFACEHENV-TPDIMTA--GKGLTGGYLPIAITVTTDE-IY-NAFY--GDYEEQKTFFHGHSY--TGNPLGCAVALAN 344 (460)
T ss_pred chhhHHHhcCC-CCCeeee--ehhhhcCccccceeeecHH-HH-HHhh--ccccccCccccCCCC--CCCHHHHHHHHHH
Confidence 111011 1222 3687765 4776555 35777776543 21 1111 1110 000011122 2233455556666
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-CccEEEEEecCCCC------CC---HHHHHHHHHhcCce
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GVPLVAFSLKDNKR------HD---EFEVAELLRRFGWI 401 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~------~~---~~~l~~~L~~~Gi~ 401 (494)
|+.+.+++ ..++..++.++|++.|+++.....+.+-. ...++.+.+..+.. .+ ...+.+.+.++|++
T Consensus 345 l~~l~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl 421 (460)
T PRK06916 345 LELYEKTN---LIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGML 421 (460)
T ss_pred HHHHHhcc---HHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeE
Confidence 77665543 56777888888888888763222222211 23355555532110 01 24688889999998
Q ss_pred eeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 402 VPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 402 v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
+.. .+ ..+|+.....+|++|++.+++.|+++++++.
T Consensus 422 ~~~-------~g-~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 422 TRP-------LG-NTIVFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred EEe-------cC-CEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 632 12 4688887778899999999999999987654
No 355
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.48 E-value=4.3e-11 Score=121.59 Aligned_cols=340 Identities=10% Similarity=-0.055 Sum_probs=187.2
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++.... +. . ..+.+.++.+.|.++++... ..+.|+++|+|
T Consensus 51 dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~-~--~~~~~~~la~~L~~~~~~~~-----~~v~f~~SGsE 121 (433)
T PRK00615 51 LGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTS-YG-L--TSEQEILFAEELFSYLGLED-----HKIRFVSSGTE 121 (433)
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCC-CC-C--CCHHHHHHHHHHHHhCCCCc-----CEEEEeCchHH
Confidence 55555444332 2335679999999888865321 11 1 12344457777888775431 24899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHH---HHHHHcCCe---e-EEE---eccCCc---cccCHHH
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWE---KFARYFEVE---L-KEV---KLSEGY---YVMDPVK 194 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~---~~~~~~G~~---v-~~v---~~~~~~---~~~d~~~ 194 (494)
|+..|++.++... | +.+|+ .....|.... .+....+-. . ... +..... ..-|+++
T Consensus 122 A~e~AiklAr~~t-------g----r~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 190 (433)
T PRK00615 122 ATMTAVRLARGIT-------G----RSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQI 190 (433)
T ss_pred HHHHHHHHHHHhh-------C----CCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHH
Confidence 9999999997631 2 23454 3555665331 111111100 0 000 000000 0236788
Q ss_pred HHHhhhh---CCeEEEEeeCCCCcccccCH----HHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCC
Q 011057 195 AVEMVDE---NTICVAAILGSTLNGEFEDV----KLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPL 267 (494)
Q Consensus 195 L~~~i~~---~t~~vv~~~~~~~tG~~~~l----~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 267 (494)
+++.+.. +..+|++--.....|.+.|. ++|.++|++| |+++++|+++.++-. ........+++ .
T Consensus 191 l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~------g~llI~DEv~tG~R~--G~~ga~~~~gv-~ 261 (433)
T PRK00615 191 FQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRT------GSLSIMDEVVTGFRV--AQGGAAAIYHV-K 261 (433)
T ss_pred HHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHc------CCEEEEEcccccccc--cHhHHHHhcCC-C
Confidence 8888853 23444444444455887664 5999999999 999999999965411 10000111222 3
Q ss_pred ceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHH
Q 011057 268 VKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENC 347 (494)
Q Consensus 268 ~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~ 347 (494)
.|.+++ .|.+.++..+|+++.+++ .. +.+... .+. ....+ .+.++....+..++|+.+.++. ..++.
T Consensus 262 PDi~~~--gK~lggG~p~~av~~~~~-i~-~~~~~~-~~~---~~~~T--~~g~p~~~aa~la~L~~i~~~~---~~~~~ 328 (433)
T PRK00615 262 PDITVY--GKILGGGLPAAAVVAHKS-IM-DHLAPE-GTI---FQAGT--LSGNPLAMAAGKASINLCREQG---FYTQL 328 (433)
T ss_pred CCeEEE--cccccCCcceeeeeecHH-HH-hhhcCC-CCc---ccCCC--CcccHHHHHHHHHHHHHHhccc---HHHHH
Confidence 677664 587765444666666543 22 211100 000 00011 1223355666777777776543 45666
Q ss_pred HHHHHHHHHHHhh----CCCeEEeecCCCccEEEEEecCCCC--C---------CHHHHHHHHHhcCceeeccccCCCCC
Q 011057 348 HENAMVLKEGLEK----TGRFNIVSKDEGVPLVAFSLKDNKR--H---------DEFEVAELLRRFGWIVPAYTMPADAQ 412 (494)
Q Consensus 348 ~~~a~~l~~~L~~----~~~~~~~~~~~~~~~v~f~~~~~~~--~---------~~~~l~~~L~~~Gi~v~~~~~~~~~~ 412 (494)
.++.++|.++|++ .+ +.+.... ...++.+.+..... + ....+.+.|.++|+++.....+.
T Consensus 329 ~~~g~~l~~~l~~~~~~~g-~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~--- 403 (433)
T PRK00615 329 STLEQNFLSPIEEMIRSQG-FPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFEA--- 403 (433)
T ss_pred HHHHHHHHHHHHHHHHHcC-CCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCccccc---
Confidence 6677777555554 22 3322222 23455566532210 0 12368889999999864332221
Q ss_pred CceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 413 HITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 413 ~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
..++..+|++|||+++++++++++.+-
T Consensus 404 ------~~ls~~ht~~did~~~~a~~~~~~~~~ 430 (433)
T PRK00615 404 ------SFLSSAHSMENLDYAQNVLIDSLEKVF 430 (433)
T ss_pred ------cceecCCCHHHHHHHHHHHHHHHHHHh
Confidence 134566799999999999999988753
No 356
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.47 E-value=1.4e-11 Score=124.19 Aligned_cols=265 Identities=14% Similarity=0.062 Sum_probs=177.9
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCee
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVEL 178 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (494)
+..+..|+.+|.+. .-.+++|+|.||...+.+.... ++.|+++...|-|.....-+.|+..
T Consensus 74 eAqe~aA~~fgAd~------tyFvvNGTS~ank~vi~a~~~~-------------GD~VLvdRN~HKSi~~glilaGa~P 134 (557)
T COG1982 74 EAQELAARVFGADH------TYFVVNGTSTANKAVINAVLTP-------------GDKVLVDRNCHKSIHHGLILAGATP 134 (557)
T ss_pred HHHHHHHHHhCCCc------eEEEECCccHHHHHHHHhhcCC-------------CCEEEecCCccHHHHHHHHHcCCce
Confidence 46677999999985 2566778888888777666432 3689999999999999999999998
Q ss_pred EEEeccCCc-----cccCHHHHHHhhhhC--C-eEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccc
Q 011057 179 KEVKLSEGY-----YVMDPVKAVEMVDEN--T-ICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGF 250 (494)
Q Consensus 179 ~~v~~~~~~-----~~~d~~~L~~~i~~~--t-~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~ 250 (494)
+++....+. +.++.+.+++++.++ . +++++++||+. |..-++++|.++++.+ ++|+.+|++++..
T Consensus 135 vyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYd-Gv~~n~~~i~~~~~~~------~a~v~~deah~~~ 207 (557)
T COG1982 135 VYLEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYD-GVCYNLRKIVELLHHY------GAWVLYDEAHPAH 207 (557)
T ss_pred EEecCCCCccccccCCCCHHHHHHHHHhChhhheeEEEecCccc-eEeecHHHHHHHHhhc------CceEEhhhcCccc
Confidence 888654322 478999998877654 3 66777777655 9999999999999999 9999999999864
Q ss_pred cccccCCccccccc-CCCceEEEEcCcccCCcCCceEEEEEeCCCCc-ccccccccCCCCCCCCCcccccCcchHHHHHH
Q 011057 251 IAPFLYPELEWDFR-LPLVKSINVSGHKYGLVYAGIGWVIWRNKEDL-PEELIFHINYLGADQPTFTLNFSKGSSQVIAQ 328 (494)
Q Consensus 251 ~~~~~~~~~~~~~~-~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~-~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~ 328 (494)
.. ..+... +.. ..++|+++-|.||.+.+-.-.+++-+++...+ ...+ . .++.. +..|.|...+++.
T Consensus 208 ~~--~~~~l~-~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~--n-ea~~~------h~STSPsY~l~AS 275 (557)
T COG1982 208 FD--FSPMLP-ESALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERF--N-EALMM------HQSTSPSYPLMAS 275 (557)
T ss_pred cc--ccccCc-chhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHH--H-HHHHH------HccCCchHHHHHH
Confidence 32 112111 122 25799999999999976666677766652111 0110 0 01100 1123333333333
Q ss_pred HHHHH-HhcHhHH---HHHHHHHHHHHHHHHHHHhhCCCeEEeecCCC-------------------ccE-EEEEecCCC
Q 011057 329 YYQLI-RLGFEGY---RNVMENCHENAMVLKEGLEKTGRFNIVSKDEG-------------------VPL-VAFSLKDNK 384 (494)
Q Consensus 329 ~~al~-~l~~~g~---~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~-------------------~~~-v~f~~~~~~ 384 (494)
.-+-+ ..+..|. ++.++...+.++++++...++++|+++.++.. -|+ +++.. +..
T Consensus 276 lD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~t-p~~ 354 (557)
T COG1982 276 LDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITT-PEF 354 (557)
T ss_pred HHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEec-CCC
Confidence 32222 2333342 33367778888999999999988888776521 011 11222 245
Q ss_pred CCCHHHHHHHHHhcCcee
Q 011057 385 RHDEFEVAELLRRFGWIV 402 (494)
Q Consensus 385 ~~~~~~l~~~L~~~Gi~v 402 (494)
++....+.+.|+++|++.
T Consensus 355 Gipg~~v~~~L~e~gii~ 372 (557)
T COG1982 355 GIPGAIVAKYLREHGIIP 372 (557)
T ss_pred CCcHHHHHHHHHHcCCee
Confidence 788999999999999984
No 357
>PRK07046 aminotransferase; Validated
Probab=99.45 E-value=1.3e-10 Score=118.80 Aligned_cols=335 Identities=14% Similarity=0.022 Sum_probs=187.8
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ ...+.+|.+.+++.+.++.... + .. ..+.+.++.+.|+++++.+ .+.|+++|||
T Consensus 73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~-~-~~--~~~~~~~lAe~l~~~~~~~-------~v~F~nSGtE 141 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLT-T-ML--PSEDAAWVGEELARRFGLP-------YWQVATTATD 141 (453)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCC-C-CC--CCHHHHHHHHHHHHHhCCC-------EEEEECCHHH
Confidence 55555544332 2335578999999888876432 1 12 2355666888898888654 3899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHH-c-----------CCee----EEEeccCCccccC
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARY-F-----------EVEL----KEVKLSEGYYVMD 191 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~-~-----------G~~v----~~v~~~~~~~~~d 191 (494)
|+..|++.++.. .| +.+|+ +....|......... . |... ..+.+. + -|
T Consensus 142 A~e~AlrlAR~~-------TG----r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~-nd 206 (453)
T PRK07046 142 ANRFVLRWARAV-------TG----RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE---F-ND 206 (453)
T ss_pred HHHHHHHHHHHh-------hC----CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC---C-CC
Confidence 999999999764 12 24454 455567643222111 0 1100 001111 1 37
Q ss_pred HHHHHHhhhhC-CeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCC
Q 011057 192 PVKAVEMVDEN-TICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLP 266 (494)
Q Consensus 192 ~~~L~~~i~~~-t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (494)
++++++.+..+ ..+|++--.....|.+.| ++++.++|+++ |+++++|+++. +-..+.. ....+++
T Consensus 207 ~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~------g~llI~DEV~t-fr~g~Gg--~~~~~gv- 276 (453)
T PRK07046 207 LAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRY------GTLLVIDETHT-ISSGPGG--YTRAHGL- 276 (453)
T ss_pred HHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEEcccc-CccCCcc--hhHHhCC-
Confidence 89999988643 444444333334466644 79999999999 99999999985 1111111 1112232
Q ss_pred CceEEEEcCcccCCcCCceEEEEEeCCCCcccccccc-cCCCCCC-CCCcccccCcchHHHHHHHHHHHHhcHhHHHHHH
Q 011057 267 LVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFH-INYLGAD-QPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVM 344 (494)
Q Consensus 267 ~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~-~~y~~~~-~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~ 344 (494)
..|.+++ -|.+.++..+|+++.+++ .+ +.+... .....+. .-..+ +..++....+..+.|+.+.++ +..
T Consensus 277 ~PDi~t~--gK~lggG~Pi~av~g~~~-i~-~~~~~~~~~~~~~~~~~~~T--~~gnpl~~aa~~a~L~~l~~~---~~~ 347 (453)
T PRK07046 277 EPDFLVV--GKPIAGGVPCAVYGFSAE-LA-ERAQAAKASAPPGHSGIGTT--LSANALAMAAMRATLAEVMTE---AAY 347 (453)
T ss_pred Cccceee--hhhhcCCCcceeeeehHH-HH-HHHhhccccCCCCCceeCCC--CcccHHHHHHHHHHHHHHhcc---cHH
Confidence 3687764 588776677887776543 22 211100 0000000 00111 222334455566666666443 345
Q ss_pred HHHHHHHHHHHHHHhh----CCC-eEEeecCCCccEEEEEecCCCC---------CC---HHHHHHHHHhcCceeecccc
Q 011057 345 ENCHENAMVLKEGLEK----TGR-FNIVSKDEGVPLVAFSLKDNKR---------HD---EFEVAELLRRFGWIVPAYTM 407 (494)
Q Consensus 345 ~~~~~~a~~l~~~L~~----~~~-~~~~~~~~~~~~v~f~~~~~~~---------~~---~~~l~~~L~~~Gi~v~~~~~ 407 (494)
++..++.++|+++|++ .+- ..+... ..++.+.+..... .+ ...+...|.++|+++..
T Consensus 348 ~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~---G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~--- 421 (453)
T PRK07046 348 AHMLALAARLAAGLRAVIARHGLPWHVTRV---GARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITP--- 421 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEEe---CcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEec---
Confidence 6666667777777654 331 222222 2344454422111 01 23566778899998632
Q ss_pred CCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 408 PADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 408 ~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
. ...++++. .+|++|||.+++.++++++++.
T Consensus 422 -~----~~~~~~~p--~~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 422 -F----HNMMLVCP--ATTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred -c----cCcEEEeC--CCCHHHHHHHHHHHHHHHHHHh
Confidence 1 12356654 4899999999999999987763
No 358
>PRK07483 hypothetical protein; Provisional
Probab=99.45 E-value=1.7e-10 Score=117.85 Aligned_cols=359 Identities=12% Similarity=0.018 Sum_probs=195.7
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCC-CCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYV-DMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.+++... .... ...+...++.+.|++++.... ..+.++++|+
T Consensus 28 dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~--~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGs 100 (443)
T PRK07483 28 TGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSF--FTTEPAEALADRLVAAAPAGL-----EHVYFVSGGS 100 (443)
T ss_pred CCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccc--cCCHHHHHHHHHHHHhCCCCC-----CEEEEcCCcH
Confidence 45555544432 2335578899999888875321 1111 122334457777888764211 2489999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEe-CCCcchHHHHHHHHcCC------------eeEEEeccCCcccc----
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLSEGYYVM---- 190 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~~~---- 190 (494)
||+..|++.++..+..+ |. ..+.+|+. ....|....-+....|- .+..++.... ++-
T Consensus 101 EAve~AlklAr~~~~~~----g~-~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~ 174 (443)
T PRK07483 101 EAVEAALKLARQYFVEI----GQ-PQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYA-YREQRAG 174 (443)
T ss_pred HHHHHHHHHHHHHHHhc----CC-CCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCcc-ccccccC
Confidence 99999999997643211 11 11345554 56677654333332221 1223332110 110
Q ss_pred ---------CHHHHHHhhhh----CCeEEEEeeCCC--CcccccC----HHHHHHHHHHhhcccCCCceEEEeccccccc
Q 011057 191 ---------DPVKAVEMVDE----NTICVAAILGST--LNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFI 251 (494)
Q Consensus 191 ---------d~~~L~~~i~~----~t~~vv~~~~~~--~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~ 251 (494)
.++++++++.. +..+|+ ..|-- .-|.+.| +++|.++|++| |+++++|+++.++.
T Consensus 175 ~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi-vEPiqg~~gG~~~~~~~fl~~lr~lc~~~------gillI~DEV~tGfG 247 (443)
T PRK07483 175 ESDEAYGQRLADELEAKILELGPDTVAAFV-AETVVGATAGAVPPVPGYFKRIREVCDRY------GVLLILDEVMCGMG 247 (443)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCceEEEE-EeCcccCcCCeEeCCHHHHHHHHHHHHHh------CCEEEEecceeCcc
Confidence 12566665642 234444 44433 2366644 88999999999 99999999997652
Q ss_pred ccccCCcccc-cccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHH
Q 011057 252 APFLYPELEW-DFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQY 329 (494)
Q Consensus 252 ~~~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~ 329 (494)
- ......+ .+++ ..|.+++ -|.+.++. .+|.++++++ .. +.+.....++.. ..| +..++....+..
T Consensus 248 R--tG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~h---~~T--~~gnpl~~aaa~ 315 (443)
T PRK07483 248 R--TGTLFACEEDGV-APDLVTI--AKGLGAGYQPIGAVLASDR-IY-DAIADGSGFFQH---GHT--YLGHATACAAAL 315 (443)
T ss_pred c--CcHHHHHhhcCC-CCCeeee--hhhhccCccccEEEEEcHH-HH-HHHhcCCCcccc---CCC--CCCCHHHHHHHH
Confidence 1 1110111 1222 3688775 47776654 5777777653 21 111111100000 011 222234455566
Q ss_pred HHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhC-CCeEEeecCC-CccEEEEEecCCC----CC-----CHHHHHHHHHhc
Q 011057 330 YQLIRLGFEGYRNVMENCHENAMVLKEGLEKT-GRFNIVSKDE-GVPLVAFSLKDNK----RH-----DEFEVAELLRRF 398 (494)
Q Consensus 330 ~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~~~~~-~~~~v~f~~~~~~----~~-----~~~~l~~~L~~~ 398 (494)
+.|+.+.+++ ..++..++.++|++.|+++ ....++.+-. ...++.+.+.... .. -...+.+.+.++
T Consensus 316 a~l~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (443)
T PRK07483 316 AVQRVIAEDG---LLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMAR 392 (443)
T ss_pred HHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHC
Confidence 6666666543 5666677777777777653 1122222111 2345566553211 00 134678889999
Q ss_pred CceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 399 GWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 399 Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
|+++.............++|+.-...+|++++|.+++.|++++.++..
T Consensus 393 Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 393 GLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred CcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 998743211000011357998877788999999999999999987653
No 359
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.45 E-value=4.7e-11 Score=109.39 Aligned_cols=308 Identities=15% Similarity=0.071 Sum_probs=205.3
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCC----CcchHHHHHHHHc
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGA----NVQVCWEKFARYF 174 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~----~~h~s~~~~~~~~ 174 (494)
-+...++.+.|+... .+.+.++-|..+...+......... +-+|+.-. ..|+++..-+++.
T Consensus 115 ~il~l~~~iVGA~e~-----EvavmNsLTvNlh~Ll~sFyKPTek----------R~KILlE~kaFPSDhYAiesQ~~lh 179 (465)
T KOG3846|consen 115 PILPLLAPIVGAQEN-----EVAVMNSLTVNLHSLLISFYKPTEK----------RFKILLEKKAFPSDHYAIESQCKLH 179 (465)
T ss_pred hhhhhhhhhccCCch-----hhhhHhhhhhHHHHHHHHhcCCcch----------hhhhhhccCCCCchHHHHHhhhhhc
Confidence 456678999999763 2444555454444444444322111 12455422 3688899999999
Q ss_pred CCee----EEEeccCCccccCHHHHHHhhhhC---CeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccc
Q 011057 175 EVEL----KEVKLSEGYYVMDPVKAVEMVDEN---TICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAAS 247 (494)
Q Consensus 175 G~~v----~~v~~~~~~~~~d~~~L~~~i~~~---t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~ 247 (494)
|+.+ +.+...++...+..+++.+.|+++ ..+|.++...+.||...++.+|...-+.. |+++-.|-||
T Consensus 180 G~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~k------gc~VGfDLAH 253 (465)
T KOG3846|consen 180 GISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFK------GCLVGFDLAH 253 (465)
T ss_pred CCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCC------CcEechhhhh
Confidence 9874 444444444567889998888865 35566777888999999999999555555 9999999999
Q ss_pred ccccccccCCcccccccCCCceEEEEcCcccCCcCCc-eEEEEEeCCCCcccccccccCCCCCCCC-Cc-----------
Q 011057 248 GGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAG-IGWVIWRNKEDLPEELIFHINYLGADQP-TF----------- 314 (494)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~G~~~~~~~~~~~~~~~~~~~y~~~~~~-~~----------- 314 (494)
+.+-.|. .+...++|+.+++++|+++++.| +|.+++..+ +.....+....|.+.... .|
T Consensus 254 AvgNVpL-------~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHek-h~~~~~prl~GWwgh~~s~RF~Mdnvl~lipG 325 (465)
T KOG3846|consen 254 AVGNVPL-------QLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEK-HTKESLPRLAGWWGHDPSKRFQMDNVLELIPG 325 (465)
T ss_pred hhcCCce-------EEeecCCceEEEeeecccccCCCccceeeeehh-hhcchhhHHhhhccCCcchhhhhccccccCcc
Confidence 8775433 22334899999999999987655 566666543 333444444555554321 00
Q ss_pred --ccc-cCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCC-----------eEEeecCC---CccEEE
Q 011057 315 --TLN-FSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGR-----------FNIVSKDE---GVPLVA 377 (494)
Q Consensus 315 --~~~-~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~-----------~~~~~~~~---~~~~v~ 377 (494)
.+. ..++...+.++..+|+.+.+..+.+.+++..-++.||...|+...+ +.++.+.. +...++
T Consensus 326 a~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLs 405 (465)
T KOG3846|consen 326 ALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLS 405 (465)
T ss_pred ccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEE
Confidence 111 2233455678889999998888899999999999999888876533 23444322 334555
Q ss_pred EEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEe-ccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 378 FSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVI-REDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 378 f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~-~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
+.+.. +...+.+.|.++|+++-. ...+++|++- .-+++-.|+-+|+..|.++++.++.
T Consensus 406 l~Fss----p~~~vfqeL~krGv~~Dk-------R~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~es 464 (465)
T KOG3846|consen 406 LYFSS----PTPKVFQELHKRGVIGDK-------RRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLES 464 (465)
T ss_pred EEeCC----CchHHHHHHHHcCeeccc-------cCCCceEeecchhhccHHHHHHHHHHHHHHHHHhhc
Confidence 55533 346899999999998532 2335689874 4577888999999999998887653
No 360
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.45 E-value=7.4e-11 Score=110.64 Aligned_cols=344 Identities=14% Similarity=0.069 Sum_probs=208.2
Q ss_pred hHHHHHHHHHHhcccCC-------CCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHH
Q 011057 69 EPECDKLMMAAINKNYV-------DMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKW 141 (494)
Q Consensus 69 ~p~~~~~~~~~~~~~~~-------~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~ 141 (494)
+.++-+++-..+.+-+. .|+......++|.-+++.--+.||++++ .+...+-..+|+-||+.+-.++....
T Consensus 53 s~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~--kWGVNVQp~SGSPANfavYtall~Ph 130 (477)
T KOG2467|consen 53 SRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPE--KWGVNVQPYSGSPANFAVYTALLKPH 130 (477)
T ss_pred HHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHH--HCceeeccCCCCchhhHHHhhhcCCC
Confidence 35566777666654211 1334445677777777888889999873 12223344589999987766664321
Q ss_pred HHHHHhcCCCCCCCeEE---eCCCcchHHHHHHHHcCC-------eeEEEeccCCccccCHHHHHHhhhh-CCeEEEEee
Q 011057 142 QNKRKAEGKPFDKPNIV---TGANVQVCWEKFARYFEV-------ELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAAIL 210 (494)
Q Consensus 142 ~~~~~~~g~~~~~~~vi---~~~~~h~s~~~~~~~~G~-------~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~~ 210 (494)
++|. .|+-.|-+---......+ +-....+++.++-+|.|.|++.... +|++|+ .
T Consensus 131 -------------~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~ii--a 195 (477)
T KOG2467|consen 131 -------------ERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLII--A 195 (477)
T ss_pred -------------CeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEE--e
Confidence 2343 455555332111111111 1123355666789999999976544 566554 4
Q ss_pred CCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEE
Q 011057 211 GSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIW 290 (494)
Q Consensus 211 ~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~ 290 (494)
|.+..-..-|..++.+||.+. +++++.|-||-.+.+ .....+.. .+.+|+++.+.||.+-+|.| |++++
T Consensus 196 G~SaY~R~~DYaR~R~Iad~~------gA~Lm~DMAHISgLV--AA~vipsP--Fey~DiVTTTTHKsLRGPRg-~mIFy 264 (477)
T KOG2467|consen 196 GTSAYSRLIDYARFRKIADKV------GAYLMADMAHISGLV--AAGVIPSP--FEYCDIVTTTTHKSLRGPRG-AMIFY 264 (477)
T ss_pred ccccchhhccHHHHHHHHHhc------CceeehhhhhHHHHH--hcccCCCc--ccccceeeccccccccCCcc-eeEEE
Confidence 555556667899999999999 999999999954322 11111111 24799999999999988866 56666
Q ss_pred eCCCCccc-ccccccCCCCC----CCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeE
Q 011057 291 RNKEDLPE-ELIFHINYLGA----DQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFN 365 (494)
Q Consensus 291 ~~~~~~~~-~~~~~~~y~~~----~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~ 365 (494)
|..-.-.. .......|-.. ......++|-+....+.++..+|+.-....|++..++..++++.|.++|.+.| ++
T Consensus 265 RkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~G-y~ 343 (477)
T KOG2467|consen 265 RKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRG-YK 343 (477)
T ss_pred eccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcC-ce
Confidence 65211111 00001111100 01111234444456778888888887777889999999999999999999997 99
Q ss_pred EeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCC--CCceEEEEEeccC----CChHHHHHHHHHHHH
Q 011057 366 IVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADA--QHITVLRVVIRED----FSRTLAERLVLDITK 439 (494)
Q Consensus 366 ~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~--~~~~~lRvs~~~~----~t~~~id~~i~~l~~ 439 (494)
+++......++.+.+.+ .+++...+-+.|..-+|.+.--..|++. .....+|+..-.. +.++|.++..+-|.+
T Consensus 344 lvtgGTDnHlvLvDLr~-~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~ 422 (477)
T KOG2467|consen 344 LVTGGTDNHLVLVDLRP-KGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDR 422 (477)
T ss_pred EecCCccceEEEEeccc-cCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHH
Confidence 98876566788888865 5777655555555555554322223221 1123378775443 344566655555555
Q ss_pred HHH
Q 011057 440 VLH 442 (494)
Q Consensus 440 ~~~ 442 (494)
+++
T Consensus 423 av~ 425 (477)
T KOG2467|consen 423 AVK 425 (477)
T ss_pred HHH
Confidence 544
No 361
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.44 E-value=5.6e-11 Score=117.07 Aligned_cols=340 Identities=14% Similarity=0.095 Sum_probs=189.6
Q ss_pred ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA 147 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~ 147 (494)
+++....++.. .-..|..+|....||+. +++++|.+. ++.|..|..++.++..+...+
T Consensus 55 pS~~m~aAM~~----GDD~Y~gdpSv~~Lee~----vael~G~E~-------alpthqGRgaE~Il~~~~~~~------- 112 (467)
T TIGR02617 55 VTQSMQAAMMR----GDEAYSGSRSYYALAES----VKNIFGYQY-------TIPTHQGRGAEQIYIPVLIKK------- 112 (467)
T ss_pred CCHHHHHHHHc----CCcccccCchHHHHHHH----HHHHhCCce-------EEECCCCchHHHHHHHhhccc-------
Confidence 45555555542 22346777888777765 888999985 888999999999887666431
Q ss_pred cCCCCC--CCeEEeCCCcchH-HHHHHHHcCCeeEEEecc---------CCccccCHHHHHHhhhh----CCeEEEEeeC
Q 011057 148 EGKPFD--KPNIVTGANVQVC-WEKFARYFEVELKEVKLS---------EGYYVMDPVKAVEMVDE----NTICVAAILG 211 (494)
Q Consensus 148 ~g~~~~--~~~vi~~~~~h~s-~~~~~~~~G~~v~~v~~~---------~~~~~~d~~~L~~~i~~----~t~~vv~~~~ 211 (494)
.|.... ...-+++...|+- ..-.+...|+.++.++.+ +..+.+|+++|+++|.+ +...+..+..
T Consensus 113 ~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt 192 (467)
T TIGR02617 113 REQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATIT 192 (467)
T ss_pred ccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEE
Confidence 010000 0011344455554 344567788887776432 12378999999999985 2223333322
Q ss_pred CC-Ccccc---cCHHHHHHHHHHhhcccCCCceEEEeccccccccccc-------CCccccccc---CCCceEEEEcCcc
Q 011057 212 ST-LNGEF---EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL-------YPELEWDFR---LPLVKSINVSGHK 277 (494)
Q Consensus 212 ~~-~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~-------~~~~~~~~~---~~~~D~~~~~~hK 277 (494)
+| .-|.. +.++++.++|++| |+.+|+|||--.--.-|. ......++. ...+|++++|+.|
T Consensus 193 ~N~~GGqpvslenlr~V~~la~~~------GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsK 266 (467)
T TIGR02617 193 CNSAGGQPVSLANLKAVYEIAKKY------DIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKK 266 (467)
T ss_pred EecCCCEEeCHHHHHHHHHHHHHc------CCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCC
Confidence 33 33654 6678899999999 999999997633100000 000000110 2579999999999
Q ss_pred cCCcCCceEEEEEeCC---CCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHH
Q 011057 278 YGLVYAGIGWVIWRNK---EDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVL 354 (494)
Q Consensus 278 ~l~~p~g~G~~~~~~~---~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l 354 (494)
-+++|.| |++..+++ ............|-+ +...|..++..+-++..+|...-+ ..++++.....+||
T Consensus 267 glgApvG-g~Lag~d~~~~~l~~~~~~~~i~~EG-----f~tYGGlagrd~ea~a~Gl~e~~~---~~yl~~ri~qv~yl 337 (467)
T TIGR02617 267 DAMVPMG-GLLCFKDDSFFDVYTECRTLCVVQEG-----FPTYGGLEGGAMERLAVGLYDGMN---LDWLAYRINQVQYL 337 (467)
T ss_pred CCCCccc-ceEEecchhHHHHHHHHHhhcccccC-----CcCcCchhHHHHHHHHhhhhhccc---HHHHHHHHHHHHHH
Confidence 9999987 45555555 222111111111111 111123334444444445543322 34566666778899
Q ss_pred HHHHhhCCCeEEeecCCCccEEEEE---e---cCCCCCCHHHHHHHHHh-cCce---eeccc---cCCCC----CCceEE
Q 011057 355 KEGLEKTGRFNIVSKDEGVPLVAFS---L---KDNKRHDEFEVAELLRR-FGWI---VPAYT---MPADA----QHITVL 417 (494)
Q Consensus 355 ~~~L~~~~~~~~~~~~~~~~~v~f~---~---~~~~~~~~~~l~~~L~~-~Gi~---v~~~~---~~~~~----~~~~~l 417 (494)
.++|.+.| +.+.. .....+ .+. + .+........++-.|.. .||- +.++. -|.+. .....+
T Consensus 338 ~~~L~~~G-vpi~~-~Gghav-~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~ 414 (467)
T TIGR02617 338 VNGLEEIG-VVCQQ-AGGHAA-FVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELL 414 (467)
T ss_pred HHHHHhCC-CcEEe-cCccEE-EEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCcccee
Confidence 99999986 77765 312222 121 1 11234556677777653 3432 11111 11111 113678
Q ss_pred EEEec-cCCChHHHHHHHHHHHHHHHHHhcC
Q 011057 418 RVVIR-EDFSRTLAERLVLDITKVLHELDSL 447 (494)
Q Consensus 418 Rvs~~-~~~t~~~id~~i~~l~~~~~~l~~~ 447 (494)
|+++. .-.|.+.+|...+.|..+.++-..+
T Consensus 415 RlaipRrvyt~~h~d~v~~~~~~~~~~~~~i 445 (467)
T TIGR02617 415 RLTIPRATYTQTHMDFIIEAFKHVKENAPNI 445 (467)
T ss_pred eeccccccccHhHHHHHHHHHHHHHhhhhhc
Confidence 98883 4557777777666666665554443
No 362
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.44 E-value=1.3e-10 Score=118.50 Aligned_cols=350 Identities=16% Similarity=0.086 Sum_probs=180.8
Q ss_pred cCCCCCccccc----ccCCChHHHH--HHHHHHhcccCC-CCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecC
Q 011057 53 DGNPRLNLASF----VTTWMEPECD--KLMMAAINKNYV-DMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVG 125 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~--~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g 125 (494)
+|+.++.+.++ .-.+.+|.+. +++.+.+++... .............++.++|+++.+.+. ...+.++++
T Consensus 36 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~----~~~v~f~~s 111 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPA----LPHLFFIEG 111 (431)
T ss_pred CCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCC----cCEEEEeCC
Confidence 45555544332 2235578887 788777664321 111101111222245556777652111 134889999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCC-CCCeEE-eCCCcchHHHHHHHHcCCe-eE----------EE-------eccC
Q 011057 126 SSEAIMLAGLAFKRKWQNKRKAEGKPF-DKPNIV-TGANVQVCWEKFARYFEVE-LK----------EV-------KLSE 185 (494)
Q Consensus 126 gt~a~~~a~~a~~~~~~~~~~~~g~~~-~~~~vi-~~~~~h~s~~~~~~~~G~~-v~----------~v-------~~~~ 185 (494)
|+||+..|++.++....++.+..|.+. .+.+|+ .....|....-+....|.. .. .+ +.+.
T Consensus 112 GsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 191 (431)
T TIGR03251 112 GALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDA 191 (431)
T ss_pred cHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccc
Confidence 999999999999764211101122111 123454 4555676544443333311 00 01 1000
Q ss_pred Ccc-------ccCHHHHHHhhh---hCCeEEEEeeCCCCcccc----cCHHHHHHHHHHhhcccCCCceEEEeccccccc
Q 011057 186 GYY-------VMDPVKAVEMVD---ENTICVAAILGSTLNGEF----EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFI 251 (494)
Q Consensus 186 ~~~-------~~d~~~L~~~i~---~~t~~vv~~~~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~ 251 (494)
+.. .-+++++++.+. .++.+|++.-.....|.+ .-+++|.++|++| |+++++|+++.++-
T Consensus 192 ~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEV~tG~G 265 (431)
T TIGR03251 192 PNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEH------DALLIFDEVQTGVG 265 (431)
T ss_pred cccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHc------CCEEEEecchhccC
Confidence 000 012445556664 345666666555555765 3589999999999 99999999998642
Q ss_pred ccccCCcccc-cccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHH
Q 011057 252 APFLYPELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYY 330 (494)
Q Consensus 252 ~~~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~ 330 (494)
. ....... .+++ ..|.++++ |.+ | .+|++ .+++ +.........+... ...+ ++.++....+..+
T Consensus 266 r--tG~~~a~~~~gv-~PDi~~~g--K~~--~-~~g~~-~~~~--i~~~~~~~~~~~~~--~~~T--~~gnpl~~aaa~a 330 (431)
T TIGR03251 266 L--TGTAWAYQQLGV-QPDIVAFG--KKT--Q-VCGIM-AGRR--VDEVADNVFAVPSR--LNST--WGGNLVDMVRATR 330 (431)
T ss_pred c--cchHHHHHhcCC-CCCEEEec--ccC--c-cceEE-ecch--HHHhhhhcccCccc--cCCC--CCCCHHHHHHHHH
Confidence 1 1110011 1122 47888753 554 2 33444 3332 10100000001100 0112 1222345566667
Q ss_pred HHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC-CeE-EeecCC-CccEEEEEecCCCCCCHHHHHHHHHhcCceeecccc
Q 011057 331 QLIRLGFEGYRNVMENCHENAMVLKEGLEKTG-RFN-IVSKDE-GVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTM 407 (494)
Q Consensus 331 al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~-~~~~~~-~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~ 407 (494)
+|+.+.++++ .++..++.++|.++|+++. .+. ++.+.. ...++.+.+... .....+.+.|.++|+++..
T Consensus 331 ~L~~l~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~--~~~~~~~~~l~~~Gvl~~~--- 402 (431)
T TIGR03251 331 ILEIIEEERL---VDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPST--ADRDEVIRQLYREGVLLLG--- 402 (431)
T ss_pred HHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCH--HHHHHHHHHHHhCCeEEec---
Confidence 7777765543 3455555566666665431 111 222221 345667777431 1245788999999998632
Q ss_pred CCCCCCceEEEEEeccCCChHHHHHHHHHHHH
Q 011057 408 PADAQHITVLRVVIREDFSRTLAERLVLDITK 439 (494)
Q Consensus 408 ~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~ 439 (494)
.+...+|++....+|++|+|++++.|++
T Consensus 403 ----~g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 403 ----CGERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred ----CCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 1235699999889999999988888765
No 363
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.44 E-value=2.6e-10 Score=117.08 Aligned_cols=347 Identities=12% Similarity=0.064 Sum_probs=193.5
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeee-cChh
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGT-VGSS 127 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t-~ggt 127 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.+++....... ....+.+.++.+.|.+++..+-. ......++ ++|+
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~la~~L~~~~p~~~~--~~~~v~f~~~SGS 137 (464)
T PRK06938 61 EGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTL-DLTTPVKDQFVQDLFASLPEAFA--REAKIQFCGPTGT 137 (464)
T ss_pred CCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccccc-ccCCHHHHHHHHHHHHhCccccc--ccceEEEeCCCcH
Confidence 45555544333 23355788999998888653221110 11223334466667776532110 00125454 7999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCCc-c-----
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEGY-Y----- 188 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~~-~----- 188 (494)
||+..|++.++.. .| +.+|+ +....|....-+....|- ++..++..... .
T Consensus 138 EAve~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 206 (464)
T PRK06938 138 DAVEAALKLVKTA-------TG----RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLG 206 (464)
T ss_pred HHHHHHHHHHHHh-------hC----CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCc
Confidence 9999999999753 12 23454 455577654444333221 23444432110 0
Q ss_pred -----ccCHHHHHHhhhh------CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEeccccccccc
Q 011057 189 -----VMDPVKAVEMVDE------NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAP 253 (494)
Q Consensus 189 -----~~d~~~L~~~i~~------~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (494)
..+++.+++.+.+ +..+|++--.....|.+.| ++++.++|+++ |+++++|+++.++--
T Consensus 207 ~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~------giLlI~DEV~tGfGR- 279 (464)
T PRK06938 207 GEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEA------GIPLIVDEIQSGFGR- 279 (464)
T ss_pred hhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc-
Confidence 1235677887763 2345544333333355533 78999999999 999999999976521
Q ss_pred ccCCcccc-cccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHH
Q 011057 254 FLYPELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (494)
Q Consensus 254 ~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al 332 (494)
...-... .+++ ..|.+++. |.+.++..+|.++.++. + ..+ ..... ..| +..++...++..+.|
T Consensus 280 -tG~~~a~e~~gv-~PDiv~~g--KglggG~PlsAv~~~~~--~-~~~--~~~~~-----~~T--~~gnpla~Aaa~a~L 343 (464)
T PRK06938 280 -TGKMFAFEHAGI-IPDVVVLS--KAIGGSLPLAVVVYREW--L-DTW--QPGAH-----AGT--FRGNQMAMAAGSATL 343 (464)
T ss_pred -CcHHHHHHhcCC-CCCEEEee--ccccCCCceEEEeehhH--h-hcc--CCCCC-----CCC--CCcCHHHHHHHHHHH
Confidence 1110011 1222 36888764 87776677888887653 2 211 11111 112 222334555666677
Q ss_pred HHhcHhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEeecCC-CccEEEEEecCCCCC---------C---HHHHHHHHHhc
Q 011057 333 IRLGFEGYRNVMENCHENAMVLKEGLEKTG-RFNIVSKDE-GVPLVAFSLKDNKRH---------D---EFEVAELLRRF 398 (494)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~~~---------~---~~~l~~~L~~~ 398 (494)
+.+.+++ ..++..++.++|.+.|+++- ...++..-. ...++.+.+...... + ...+.+.+.++
T Consensus 344 ~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (464)
T PRK06938 344 RYIKEHR---LAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRR 420 (464)
T ss_pred HHHHHhH---HHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHC
Confidence 7776553 45666677777777776641 122222211 234556666322110 1 24577888999
Q ss_pred CceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 399 GWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 399 Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
|+++... .....++|+.....+|++|++.+++.+++++.++
T Consensus 421 Gll~~~~-----g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 421 GLILELG-----GRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred CeEEeec-----CCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 9986321 1123579998777889999999999999988764
No 364
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.43 E-value=3.4e-10 Score=116.37 Aligned_cols=348 Identities=14% Similarity=0.051 Sum_probs=189.0
Q ss_pred cCCCCCcccccc----cCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASFV----TTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++. -.+.+|.+.+++.+.++..... .......+.+.++.+.|++++.... ...+.++++|+|
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~-~~~~~~~~~~~~la~~L~~~~p~~~----~~~v~f~~sGse 126 (451)
T PRK06918 52 DGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHT-GFNVMMYEPYIELAEKLAALAPGSF----DKKVLFLNSGAE 126 (451)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCc-cccccccHHHHHHHHHHHHhCCCCC----CCEEEEcCCcHH
Confidence 555555443332 2356788999998887753221 1111123445567778888874321 024899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC-------------eeEEEeccCC---ccccC
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLSEG---YYVMD 191 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~-------------~v~~v~~~~~---~~~~d 191 (494)
|+..|++.++... | +.+|+ .....|....-+....|- .+..+|.... ...+.
T Consensus 127 A~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (451)
T PRK06918 127 AVENAVKIARKYT-------K----RQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLT 195 (451)
T ss_pred HHHHHHHHHHHHh-------C----CCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCc
Confidence 9999999997541 1 23454 455567654444333221 1233332110 00010
Q ss_pred --------HHHHHHhh----hhCCeEEEEeeCCCCc-cccc---C-HHHHHHHHHHhhcccCCCceEEEecccccccccc
Q 011057 192 --------PVKAVEMV----DENTICVAAILGSTLN-GEFE---D-VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPF 254 (494)
Q Consensus 192 --------~~~L~~~i----~~~t~~vv~~~~~~~t-G~~~---~-l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (494)
++.+++.+ ..+..+.++..|.... |.+. . +++|.++|+++ |++++.|+++.++..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~------gillI~DEV~tg~gr-- 267 (451)
T PRK06918 196 EEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEH------GILFVADEIQTGFAR-- 267 (451)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCcCc--
Confidence 12344333 2233444445555444 5442 2 78999999999 999999999986521
Q ss_pred cCCccc-ccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHH
Q 011057 255 LYPELE-WDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLI 333 (494)
Q Consensus 255 ~~~~~~-~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~ 333 (494)
...... ..+.+ ..|.++ ..|.+.++..+|+++.+.+ .. +.+.. . . ...++ ..+.....+..++++
T Consensus 268 ~g~~~a~~~~~v-~pDi~t--~sK~l~~G~pig~v~~~~~-i~-~~~~~--~-~----~~~T~--~g~~l~~aaa~a~l~ 333 (451)
T PRK06918 268 TGKYFAIEHFDV-VPDLIT--VSKSLGAGVPISGVIGRKE-IM-DESAP--G-E----LGGTY--AGSPLGCAAALAVLD 333 (451)
T ss_pred cCceehhHhcCC-CCCEEe--eehhhcCCCccEEEEEcHH-HH-hccCC--C-C----cCcCC--CcCHHHHHHHHHHHH
Confidence 111011 01121 256554 4588878888999987543 22 11110 0 0 01111 122233444445666
Q ss_pred HhcHhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEeec-CCCccEEEEEecCC------CCCCHHHHHHHHHhcCceeecc
Q 011057 334 RLGFEGYRNVMENCHENAMVLKEGLEKTG-RFNIVSK-DEGVPLVAFSLKDN------KRHDEFEVAELLRRFGWIVPAY 405 (494)
Q Consensus 334 ~l~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~-~~~~~~v~f~~~~~------~~~~~~~l~~~L~~~Gi~v~~~ 405 (494)
.+..+. ..++..++.+++.++|+++. +...+.. .....++.+.+... .......+.+.+.++|+.+...
T Consensus 334 ~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~ 410 (451)
T PRK06918 334 IIEKEN---LNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSA 410 (451)
T ss_pred HHHHCC---HHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeec
Confidence 554443 34455556666666665541 1211111 11344555555211 1112456777888999986331
Q ss_pred ccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 406 TMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 406 ~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
... ..++|++....++.++++.+++.|+++++.+.+
T Consensus 411 ----~~~-~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~ 446 (451)
T PRK06918 411 ----GTY-GNVIRVLMPLVITDEQLEEGLTIIEESLQACYE 446 (451)
T ss_pred ----CCC-CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 111 257999987668899999999999999987743
No 365
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.41 E-value=9.3e-10 Score=113.03 Aligned_cols=359 Identities=11% Similarity=0.001 Sum_probs=191.9
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ ...+.+|.+.+++.+.++.-..... .....+...++.+.|++++.......+...+.++++|+|
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~-~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSE 140 (472)
T PRK08742 62 DGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVML-AGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSA 140 (472)
T ss_pred CCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccc-cccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchH
Confidence 55655544443 2335678898988887764221111 011123344577778887642100000125899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCC------------eeEEEeccCCc---c----
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLSEGY---Y---- 188 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~~---~---- 188 (494)
|+..|++.++..+..+ |. ..+.+|+ +....|....-+....|. .+..+|..... .
T Consensus 141 AvE~AlKlAr~~~~~~----g~-~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~ 215 (472)
T PRK08742 141 GVEVALKMAFHYFHNR----GE-HRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSA 215 (472)
T ss_pred HHHHHHHHHHHHHHhc----CC-CCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCH
Confidence 9999999998754221 11 1123454 455567644333333221 12333322100 0
Q ss_pred ----ccCHHHHHHhhhh---CCeEEEEeeC--CCCcccccC----HHHHHHHHHHhhcccCCCceEEEeccccccccccc
Q 011057 189 ----VMDPVKAVEMVDE---NTICVAAILG--STLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL 255 (494)
Q Consensus 189 ----~~d~~~L~~~i~~---~t~~vv~~~~--~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (494)
..+++.+++.+.. +..+|+ ..| ....|.+.| ++++.++|+++ |+++|+|+++.++.- .
T Consensus 216 ~~~~~~~~~~l~~~~~~~~~~iAAvI-~EPviqg~gG~~~~p~~fl~~lr~lc~~~------gillI~DEV~TGfGR--t 286 (472)
T PRK08742 216 EDYALQAADALQALFEQSPGEICALI-LEPRLQCAGGMRMHHPAYLRRARELCDAH------GAFLIADEIATGFGR--T 286 (472)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEE-EccccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC--C
Confidence 1135667777752 334444 444 344465422 78999999999 999999999876421 1
Q ss_pred CCcccc-cccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHH
Q 011057 256 YPELEW-DFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLI 333 (494)
Q Consensus 256 ~~~~~~-~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~ 333 (494)
..-... .+++ ..|.+++ -|.+.++. .+|.++++++ .. +.+..... .+...-..| ++.++...++..+.|+
T Consensus 287 G~~~a~e~~gv-~PDiv~~--gKgl~gG~~Plaav~~~~e-i~-~~~~~~~~-~~~~~h~~T--~~gnpl~~Aaa~a~L~ 358 (472)
T PRK08742 287 GTLFACEQAGV-MPDLLCL--SKGLTGGFLPLSAVLATQQ-LY-DAFLDDSR-ERAFLHSHS--YTGNPLACAAALATLD 358 (472)
T ss_pred ccchHHHhcCC-CCCEEEE--cccccCCCCCcceeeccHH-HH-HHhhccCc-cCccCcCCC--CCccHHHHHHHHHHHH
Confidence 111111 1122 4788876 38776553 5677776543 21 11111000 000000112 2223344556666777
Q ss_pred HhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC-CccEEEEEecCCCC----CC-----HHHHHHHHHhcCceee
Q 011057 334 RLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE-GVPLVAFSLKDNKR----HD-----EFEVAELLRRFGWIVP 403 (494)
Q Consensus 334 ~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~----~~-----~~~l~~~L~~~Gi~v~ 403 (494)
.+.++++ .++..++.++|.+.++.+....++.+-. ..-++.+.+..... .. ...+.+++.++|+++.
T Consensus 359 ~i~~~~l---~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~ 435 (472)
T PRK08742 359 IFADDDV---IARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLR 435 (472)
T ss_pred HHHHCCH---HHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEE
Confidence 7766543 4455555555555554432222222211 23455666632110 01 2457788899999863
Q ss_pred ccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 404 AYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 404 ~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
. .+ .++|+.-...+|++|++.+++.|+++++++-
T Consensus 436 ~-------~g-~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 436 P-------LG-DVLYWMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred e-------cC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 2 12 4799988888999999999999999988753
No 366
>PRK06149 hypothetical protein; Provisional
Probab=99.41 E-value=1.5e-10 Score=129.26 Aligned_cols=342 Identities=14% Similarity=0.040 Sum_probs=189.9
Q ss_pred CCCCCcccccc--cCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHH
Q 011057 54 GNPRLNLASFV--TTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIM 131 (494)
Q Consensus 54 ~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~ 131 (494)
|+.++.+.+++ -.+.+|.+.+++.+.+....... ........++.++|++++..+. ..+.|+++|+||+.
T Consensus 584 G~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~---~~~~~~~~elae~L~~~~p~~~-----~~v~f~~SGsEA~e 655 (972)
T PRK06149 584 GRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNS---RFHYAAVAEFSERLAALAPDGL-----DTVFLVNSGSEAND 655 (972)
T ss_pred CCEEEECCCCccccCCCCHHHHHHHHHHHHhccccc---cccCHHHHHHHHHHHHhCCCCc-----CEEEEeCCchHHHH
Confidence 44444444433 22457888888888776532211 1122344567777888873211 24899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeE-EeCCCcchHHHHHHHHcCC-------------eeEEEeccCC---ccc-cC--
Q 011057 132 LAGLAFKRKWQNKRKAEGKPFDKPNI-VTGANVQVCWEKFARYFEV-------------ELKEVKLSEG---YYV-MD-- 191 (494)
Q Consensus 132 ~a~~a~~~~~~~~~~~~g~~~~~~~v-i~~~~~h~s~~~~~~~~G~-------------~v~~v~~~~~---~~~-~d-- 191 (494)
.|++.++.. .| +..| .+....|....-+....+. .+..++.... .+. .+
T Consensus 656 ~AlklAr~~-------tg----r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~ 724 (972)
T PRK06149 656 LAIRLAWAA-------SG----RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSA 724 (972)
T ss_pred HHHHHHHHh-------cC----CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccH
Confidence 999988754 12 2344 4555677533222111110 1223322110 011 11
Q ss_pred ---HHHHHHhhh------hCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccc-cccccCC
Q 011057 192 ---PVKAVEMVD------ENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGF-IAPFLYP 257 (494)
Q Consensus 192 ---~~~L~~~i~------~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~-~~~~~~~ 257 (494)
.+++++.++ ++..+|++--.....|.+.| +++|.++|++| |+++++|+++.|+ -.. ..
T Consensus 725 ~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~------g~llI~DEV~tGfGRtG--~~ 796 (972)
T PRK06149 725 ADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR------GGVCIADEVQVGYGRLG--HY 796 (972)
T ss_pred HHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEEeehhcCCccC--cc
Confidence 234444332 12344444333345588878 99999999999 9999999999543 211 00
Q ss_pred cccc-cccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc
Q 011057 258 ELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG 336 (494)
Q Consensus 258 ~~~~-~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~ 336 (494)
-... .+++ ..|.+++ -|.+.++..+|+++++++ .. +.+... .+..+ + ...++....+..+.|+.+.
T Consensus 797 ~~a~e~~gv-~PDivt~--gK~lg~G~Pl~av~~~~~-i~-~~~~~~-~~~~s-----T--~~gnP~~~aaala~L~~i~ 863 (972)
T PRK06149 797 FWGFEQQGV-VPDIITM--AKGMGNGHPLGAVITRRE-IA-EALEAE-GYFFS-----S--TGGSPVSCRIGMAVLDVLR 863 (972)
T ss_pred chhhhhcCC-CCCEEEe--cccccCCeeeEEEEEcHH-HH-hhhccC-CcccC-----C--CCCCHHHHHHHHHHHHHHH
Confidence 0000 1222 4788765 487766666788887653 21 211110 11111 1 1222345555666677776
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhhCCC-eEEeecCC-CccEEEEEecCCC----C--CCHHHHHHHHHhcCceeeccccC
Q 011057 337 FEGYRNVMENCHENAMVLKEGLEKTGR-FNIVSKDE-GVPLVAFSLKDNK----R--HDEFEVAELLRRFGWIVPAYTMP 408 (494)
Q Consensus 337 ~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~~~~~-~~~~v~f~~~~~~----~--~~~~~l~~~L~~~Gi~v~~~~~~ 408 (494)
++ +..++..++.++|+++|+++.. ..++..-. ...++.+.+.... . .....+.++|.++|+++...
T Consensus 864 ~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~--- 937 (972)
T PRK06149 864 EE---KLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPT--- 937 (972)
T ss_pred hc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeec---
Confidence 55 3566677777788888876521 22222211 2345566653110 0 11457889999999986431
Q ss_pred CCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 409 ADAQHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 409 ~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
.....++|+.-...+|++++|.+++.|++++.+
T Consensus 938 --g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 938 --GDHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred --CCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 122357888766668999999999999998864
No 367
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.40 E-value=1.7e-10 Score=114.19 Aligned_cols=340 Identities=16% Similarity=0.071 Sum_probs=192.5
Q ss_pred cCCChHHHHHHHHHHhcccC----CCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHH
Q 011057 65 TTWMEPECDKLMMAAINKNY----VDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRK 140 (494)
Q Consensus 65 ~~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~ 140 (494)
-.+..|++.+++.+-+++-. ......| . + ++.++|+++..-.. -..+.+++|||+|+-++++.++..
T Consensus 58 ~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a--~--~LA~~L~~~aP~~~----l~~vFf~~sGSeAvEtAlKma~qY 128 (449)
T COG0161 58 HGHGRPEIAEAIKKQLDKLPHVMFGGFTHEP-A--I--ELAEKLAELAPEGG----LDHVFFTDSGSEAVETALKMALQY 128 (449)
T ss_pred cCcCCHHHHHHHHHHHHhCCchhhcccCCch-H--H--HHHHHHHHhCCCCC----ccEEEEeCCchHHHHHHHHHHHHH
Confidence 33557888888887766522 2223333 2 2 36677888876210 135999999999999999999988
Q ss_pred HHHHHHhcCCCCCCCeEEe-CCCcchHHHHHHHHcCC-------------eeEEEeccC-------Cccc----cCHHHH
Q 011057 141 WQNKRKAEGKPFDKPNIVT-GANVQVCWEKFARYFEV-------------ELKEVKLSE-------GYYV----MDPVKA 195 (494)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~-------------~v~~v~~~~-------~~~~----~d~~~L 195 (494)
|..+ |.+. +.++|. ....|....-++..-|. ++..++... +.+. -..++|
T Consensus 129 ~~~~----G~p~-r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~l 203 (449)
T COG0161 129 WRAR----GQPQ-RKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADEL 203 (449)
T ss_pred HHhc----CCCc-ceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHH
Confidence 8654 2221 233443 44466544444433331 122333221 1011 235677
Q ss_pred HHhhhh---CCeEEEEeeCCC-C-cccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccC
Q 011057 196 VEMVDE---NTICVAAILGST-L-NGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRL 265 (494)
Q Consensus 196 ~~~i~~---~t~~vv~~~~~~-~-tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~ 265 (494)
++.|.. ++.+-++..|-- . .|.+.| ++++.+||++| |++++.|++-.+|-- ...-... .++
T Consensus 204 e~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky------~ILlI~DEV~tGFGR--TG~~FA~e~~g- 274 (449)
T COG0161 204 EALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKY------GILLIADEVATGFGR--TGKMFACEHAG- 274 (449)
T ss_pred HHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHc------CcEEEeecceeCCCc--CchhhhhhhcC-
Confidence 777765 444433444333 3 466643 78999999999 999999998866421 1111111 111
Q ss_pred CCceEEEEcCcccCCcC-CceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHH
Q 011057 266 PLVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVM 344 (494)
Q Consensus 266 ~~~D~~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~ 344 (494)
-..|.+++. |.+.++ ..+|.++++++ .. +.+.. .+.+...-.+| ++-++...++..+.|+.+.+++ +.
T Consensus 275 i~PDi~~~a--KGLT~GY~Pl~a~l~~~~-I~-~~~~~--~~~~~f~HG~T--YsghPlacAaAla~L~i~e~e~---l~ 343 (449)
T COG0161 275 IVPDILCLA--KGLTGGYLPLSAVLTSDR-IY-EAFSD--GDAGAFMHGHT--YSGNPLACAAALANLDILEEED---LL 343 (449)
T ss_pred CCCCeeeec--ccccccchhhHhHhhhHH-HH-HHHhc--ccCCeeccCCc--cccCHHHHHHHHHHHHHHHhcC---HH
Confidence 236877755 776432 23455555443 11 11111 11111111222 3443445555566667776654 55
Q ss_pred HHHHHHHHHHHHHHhh-CCCeEEeecCCCcc-EEEEEecCCCCCC-------HHHHHHHHHhcCceeeccccCCCCCCce
Q 011057 345 ENCHENAMVLKEGLEK-TGRFNIVSKDEGVP-LVAFSLKDNKRHD-------EFEVAELLRRFGWIVPAYTMPADAQHIT 415 (494)
Q Consensus 345 ~~~~~~a~~l~~~L~~-~~~~~~~~~~~~~~-~v~f~~~~~~~~~-------~~~l~~~L~~~Gi~v~~~~~~~~~~~~~ 415 (494)
++..++..+|.++|++ +.+...+.+-...+ +..+.+..+.+-. ...+.+...++|+++++. +.
T Consensus 344 ~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~-------g~- 415 (449)
T COG0161 344 ERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL-------GD- 415 (449)
T ss_pred HHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec-------CC-
Confidence 6667888889888887 44333444433344 3445554332211 457888889999987653 11
Q ss_pred EEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 416 VLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 416 ~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
.+=++--...|++|+|++++.+++++++...
T Consensus 416 ~i~~~PPliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 416 VIYLMPPLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred EEEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 3334444467899999999999999987654
No 368
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.40 E-value=2.9e-10 Score=116.25 Aligned_cols=354 Identities=14% Similarity=0.057 Sum_probs=187.7
Q ss_pred cCCCCCccccc----ccCCChHHHHH--HHHHHhcccCC-CCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecC
Q 011057 53 DGNPRLNLASF----VTTWMEPECDK--LMMAAINKNYV-DMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVG 125 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~--~~~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g 125 (494)
+|+.++.+.++ .-.+.+|.+.+ ++.+.+..-.. .........+...++.+.|+++.+-+. ...+.|+++
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~----~~~v~f~~S 118 (443)
T PRK08297 43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPE----LPHLFFVDG 118 (443)
T ss_pred CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCC----CCEEEEeCc
Confidence 46655544443 22355788888 88777654211 000001112333346666777763111 135899999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCC-CCCCeEE-eCCCcchHHHHHHHHcCCee-----------EEEeccC------C
Q 011057 126 SSEAIMLAGLAFKRKWQNKRKAEGKP-FDKPNIV-TGANVQVCWEKFARYFEVEL-----------KEVKLSE------G 186 (494)
Q Consensus 126 gt~a~~~a~~a~~~~~~~~~~~~g~~-~~~~~vi-~~~~~h~s~~~~~~~~G~~v-----------~~v~~~~------~ 186 (494)
|+||+..|++.++..+..++...|.. ..+.+|+ +....|....-+....|... ..++... +
T Consensus 119 GsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (443)
T PRK08297 119 GALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPG 198 (443)
T ss_pred hHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcc
Confidence 99999999999976432110001210 1124455 45566765444443333110 0011100 0
Q ss_pred -c-------cccCHHHHHHhhhh---CCeEEEEeeCCCCcccc----cCHHHHHHHHHHhhcccCCCceEEEeccccccc
Q 011057 187 -Y-------YVMDPVKAVEMVDE---NTICVAAILGSTLNGEF----EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFI 251 (494)
Q Consensus 187 -~-------~~~d~~~L~~~i~~---~t~~vv~~~~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~ 251 (494)
+ ..-+++++++.+.. ++.+|++--.....|.+ .-+++|.++|++| |+++++|+++.++-
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~------g~llI~DEV~tGfG 272 (443)
T PRK08297 199 EDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEH------DALLIFDEVQTGVG 272 (443)
T ss_pred cccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhccC
Confidence 0 00134556666653 34555554444444665 4589999999999 99999999997641
Q ss_pred ccccCCcccc-cccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHH
Q 011057 252 APFLYPELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYY 330 (494)
Q Consensus 252 ~~~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~ 330 (494)
. ....... .+++ ..|.+++ -|.+ | .|.++++++ .. ..... .+.....-..| +..++....+..+
T Consensus 273 R--tG~~~a~~~~gv-~PDiv~~--gK~l--~--~~a~l~~~~-i~-~~~~~--~~~~~~~~~~T--~~gnpl~~aaa~a 337 (443)
T PRK08297 273 L--TGTAWAYQQLGV-RPDIVAF--GKKT--Q--VCGIMAGRR-VD-EVEDN--VFAVSSRINST--WGGNLVDMVRARR 337 (443)
T ss_pred c--cchHHHHHhcCC-CCCEEEe--cccc--c--ccceecchH-HH-Hhhhh--hccCccccCCC--CCccHHHHHHHHH
Confidence 1 1100000 1122 4788875 4765 2 334444432 10 00000 00000000111 1222344455556
Q ss_pred HHHHhcHhHHHHHHHHHHHHHHHHHHHHhhC----CCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccc
Q 011057 331 QLIRLGFEGYRNVMENCHENAMVLKEGLEKT----GRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYT 406 (494)
Q Consensus 331 al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~ 406 (494)
+|+.+.++ +..++..++.++|.++|+++ +.+-.-..+ ...++.+.+... .....+.+.|.++|+++..
T Consensus 338 ~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg-~G~~~~i~~~~~--~~~~~~~~~l~~~Gvl~~~-- 409 (443)
T PRK08297 338 ILEVIEED---GLVENAARQGEYLLARLEELAAEFPAVVSNVRG-RGLMCAFDLPTT--ADRDEVIRRLWEEGVLVLP-- 409 (443)
T ss_pred HHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHCCCcceeeec-cceEEEEEecCH--HHHHHHHHHHHHCCEEEec--
Confidence 66666554 45666777777777777664 311101111 345667777431 1245788999999998632
Q ss_pred cCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 407 MPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 407 ~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
.+...+|++....+|++++|.+++.|+++++++
T Consensus 410 -----~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 410 -----CGERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred -----CCCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 123568998888889999999999999988765
No 369
>PRK06148 hypothetical protein; Provisional
Probab=99.39 E-value=1.9e-10 Score=128.48 Aligned_cols=343 Identities=14% Similarity=0.079 Sum_probs=192.6
Q ss_pred CCCCCcccccc--cCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHH
Q 011057 54 GNPRLNLASFV--TTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIM 131 (494)
Q Consensus 54 ~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~ 131 (494)
|+.++.+.+++ -.+.+|.+.+++.+.++.-.... .+ ..+.+.++.++|++++..+. ..+.|+++||||+.
T Consensus 623 G~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~-~~--~~~~~~~lAe~L~~~~p~~~-----~~v~f~nSGsEA~e 694 (1013)
T PRK06148 623 GRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNT-RY--LHDAIVAYAERLTATLPDGL-----TVAFFVNSGSEANS 694 (1013)
T ss_pred CCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcC-Cc--CCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHHHHH
Confidence 44444344332 22457889999888776532211 11 23344557777888764321 24899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcC------------CeeEEEeccCC---ccc-cC---
Q 011057 132 LAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFE------------VELKEVKLSEG---YYV-MD--- 191 (494)
Q Consensus 132 ~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G------------~~v~~v~~~~~---~~~-~d--- 191 (494)
.|++.++.. .| +.+|| +....|....-+....| -.+..++.... .+. .|
T Consensus 695 ~AlklAr~~-------tG----r~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 763 (1013)
T PRK06148 695 LALRLARAH-------TG----QRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEH 763 (1013)
T ss_pred HHHHHHHHh-------cC----CCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhh
Confidence 999999764 12 23444 45556654322222111 01222221100 011 01
Q ss_pred ----HHHHHHhhh------hCCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCC
Q 011057 192 ----PVKAVEMVD------ENTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYP 257 (494)
Q Consensus 192 ----~~~L~~~i~------~~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~ 257 (494)
.+.+++.+. ++..+|++--.....|.+.| ++++.++|+++ |+++|+|+++.|+-- ...
T Consensus 764 ~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~------g~llI~DEVqtGfGR--tG~ 835 (1013)
T PRK06148 764 GRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA------GGVCIADEVQVGFGR--VGS 835 (1013)
T ss_pred HHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEEecccCCCC--CCC
Confidence 134555543 23445544433334577665 89999999999 999999999966411 110
Q ss_pred -cccc-cccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHh
Q 011057 258 -ELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRL 335 (494)
Q Consensus 258 -~~~~-~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l 335 (494)
-... .+++ ..|.+++ -|.+.++..+|.++.+++ .. +.+.....+ ..|+ ..++....+..+.|+.+
T Consensus 836 ~~~a~e~~gv-~PDivt~--gK~lggG~Plgav~~~~e-i~-~~~~~g~~~------~~Tf--~gnpla~aaa~a~L~~i 902 (1013)
T PRK06148 836 HWWAFETQGV-VPDIVTM--GKPIGNGHPMGAVVTTRE-IA-DSFDNGMEY------FNTF--GGNPVSCAIGLAVLDII 902 (1013)
T ss_pred cchhhhhcCC-Ccceeee--cccccCCcceEEEEEcHH-HH-hhccCCCcc------ccCC--CCCHHHHHHHHHHHHHH
Confidence 0011 1122 4688775 488877777888887643 22 211110001 1122 22234555566667777
Q ss_pred cHhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEeecCC-CccEEEEEecCCC--C-CC---HHHHHHHHHhcCceeecccc
Q 011057 336 GFEGYRNVMENCHENAMVLKEGLEKTG-RFNIVSKDE-GVPLVAFSLKDNK--R-HD---EFEVAELLRRFGWIVPAYTM 407 (494)
Q Consensus 336 ~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~--~-~~---~~~l~~~L~~~Gi~v~~~~~ 407 (494)
.++ +..++..++.++|+++|+++. ...++..-. ...++.+.+.... . -+ ...+.+.|.++|+++...
T Consensus 903 ~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-- 977 (1013)
T PRK06148 903 EDE---DLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTE-- 977 (1013)
T ss_pred hhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEecc--
Confidence 655 355667777788888887652 122221111 2345566663211 0 11 346888899999987431
Q ss_pred CCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHH
Q 011057 408 PADAQHITVLRVVIREDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 408 ~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l 444 (494)
.....++|+.....+|++++|.+++.|++++.++
T Consensus 978 ---g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 978 ---GPHDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred ---CCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 1124679999888899999999999999998764
No 370
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.38 E-value=4.1e-10 Score=114.79 Aligned_cols=346 Identities=13% Similarity=0.052 Sum_probs=184.7
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHH-hcccCCC-C-CCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecC
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAA-INKNYVD-M-DEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVG 125 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~-~~~~~~~-~-~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g 125 (494)
+|+.++.+.++ .-.+.+|.+.+++.+. ....... + ...+...++.+.+.+.|++++.-+. ..+.|+++
T Consensus 56 dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~-----~~v~f~~S 130 (464)
T TIGR00699 56 DGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKVAPKGQ-----DQVWTGMS 130 (464)
T ss_pred CCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCCCc-----CEEEEeCC
Confidence 45544444443 2235678888888763 2221111 1 1222333344444443445543111 34899999
Q ss_pred hhHHHHHHHHHHHHHHHHH-HHh----cCCC---------CC--CCeEE-eCCCcchHHHHHHHHcCCe-----------
Q 011057 126 SSEAIMLAGLAFKRKWQNK-RKA----EGKP---------FD--KPNIV-TGANVQVCWEKFARYFEVE----------- 177 (494)
Q Consensus 126 gt~a~~~a~~a~~~~~~~~-~~~----~g~~---------~~--~~~vi-~~~~~h~s~~~~~~~~G~~----------- 177 (494)
|+||+..|++.++..+... +.. .|.. .. +.+|| .....|....-+....|-.
T Consensus 131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~ 210 (464)
T TIGR00699 131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD 210 (464)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence 9999999999997643211 000 0000 01 12455 4555676554444433321
Q ss_pred eEEEeccCCc-------------cccCHHHHHHhhhh---CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCC
Q 011057 178 LKEVKLSEGY-------------YVMDPVKAVEMVDE---NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGW 237 (494)
Q Consensus 178 v~~v~~~~~~-------------~~~d~~~L~~~i~~---~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~ 237 (494)
+..+|..... ..-+++.+++++.. +..+|++--.....|.+.| +++|.++|++|
T Consensus 211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~------ 284 (464)
T TIGR00699 211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH------ 284 (464)
T ss_pred ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc------
Confidence 1122221000 01235667777753 3455555444445587877 99999999999
Q ss_pred CceEEEecccccccccccCCcccc-cccCC-CceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcc
Q 011057 238 DTPIHVDAASGGFIAPFLYPELEW-DFRLP-LVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFT 315 (494)
Q Consensus 238 ~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~-~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 315 (494)
|+++++|+++.++-. ....... .+++. ..|.+++ -|.+.+ .|+++ ..+ .+.. ....+..+ +
T Consensus 285 g~lLI~DEV~tGfGr--tG~~fa~e~~gv~~~PDi~t~--gK~lg~---gG~~~-~~~-~~~~---~~~~~~~~-----T 347 (464)
T TIGR00699 285 NVAFIVDEVQTGVGA--TGKFWAHEHWNLDDPPDMVTF--SKKFQT---AGYFF-HDP-AFRP---NKPYRQFN-----T 347 (464)
T ss_pred CCEEEEeeeeeCCCC--CcchhHHHhcCCCCCCCEEEe--hhhhcc---CCccc-cch-hccC---CCCccccc-----C
Confidence 999999999966421 1110011 12222 4788765 476631 13332 221 1100 00001111 1
Q ss_pred cccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC-CeE-EeecC---CCccEEEEEecCCCCCCHHH
Q 011057 316 LNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTG-RFN-IVSKD---EGVPLVAFSLKDNKRHDEFE 390 (494)
Q Consensus 316 ~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~-~~~~~---~~~~~v~f~~~~~~~~~~~~ 390 (494)
+..++....+..++|+.+.+++ ..++..++.++|.+.|+++. .+. ++... ....++.+.+... .....
T Consensus 348 --~~gnp~~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~--~~~~~ 420 (464)
T TIGR00699 348 --WMGDPSRALILREIIQEIKRKD---LLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDE--AKRDK 420 (464)
T ss_pred --CCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCH--HHHHH
Confidence 2223344555666677765543 45566666677777776642 122 22111 1455777776321 12467
Q ss_pred HHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 391 VAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 391 l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
+.+.+.++|+++.. .+..++|++....+|.+|+|.+++.|+++
T Consensus 421 i~~~~~~~Gvl~~~-------~g~~~ir~~Ppl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 421 LLKKARNNGVNIGG-------CGVKAIRLRPMLVFQKHHADIFLEIISKI 463 (464)
T ss_pred HHHHHHHCCcEEec-------CCCCeEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 88999999998743 13467999998899999999998888775
No 371
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.37 E-value=2.1e-10 Score=117.10 Aligned_cols=334 Identities=13% Similarity=0.056 Sum_probs=178.0
Q ss_pred cCCCCCccccc----ccCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhH
Q 011057 53 DGNPRLNLASF----VTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSE 128 (494)
Q Consensus 53 ~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~ 128 (494)
+|+.++.+.++ .-.+.+|.+.+++.+.++.... +. .+ ...+-++.+.|++++... ..+.|+++|+|
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~-~~-~~--~~~~~~la~~l~~~~p~~------~~v~f~~sGse 115 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN-FT-RP--SAIELDAAESFLELIDGA------DMVKFCKNGSD 115 (431)
T ss_pred CCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcC-CC-CC--CHHHHHHHHHHHHhCCcc------ceEEEecCHHH
Confidence 56655544332 2335578999999888876432 22 22 233335677788876321 24889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeC--CCcch---HHHHH-HHHcCCe--eE--EEeccCCccccCHHHHHHh
Q 011057 129 AIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTG--ANVQV---CWEKF-ARYFEVE--LK--EVKLSEGYYVMDPVKAVEM 198 (494)
Q Consensus 129 a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~--~~~h~---s~~~~-~~~~G~~--v~--~v~~~~~~~~~d~~~L~~~ 198 (494)
|+..|++.++.. .| +..|+.- ...|. ++.-. ....|.. +. .+.+. .-|+++|+++
T Consensus 116 A~e~AlklAr~~-------tg----r~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~d~~~l~~~ 180 (431)
T PRK06209 116 ATSAAVRLARAY-------TG----RDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR----YNDIASLEAL 180 (431)
T ss_pred HHHHHHHHHHHH-------hC----CCeEEEeccCccccccccccccCCCCCCCChhHhccccccC----CCCHHHHHHH
Confidence 999999998764 12 1344432 12221 00000 0000110 00 11111 2478999988
Q ss_pred hhh--CCeEEEEeeCCC-CcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcC
Q 011057 199 VDE--NTICVAAILGST-LNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSG 275 (494)
Q Consensus 199 i~~--~t~~vv~~~~~~-~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 275 (494)
++. +..+.+++.+.. ..+....+++|.++|++| ++++++|+++.++.. ........+++ ..|.+++
T Consensus 181 l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~------g~lLI~DEv~tG~~~--~~~g~~~~~gv-~PDi~t~-- 249 (431)
T PRK06209 181 FEDHPGRIACVILEPATADEPQDGFLHEVRRLCHEN------GALFILDEMITGFRW--HMRGAQKLYGI-VPDLSCF-- 249 (431)
T ss_pred HHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHc------CCEEEEEcccccCCc--CcchhhHHhCC-Ccceeee--
Confidence 864 223333444432 233344599999999999 999999999965421 11011111232 3576554
Q ss_pred cccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCc--ccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHH
Q 011057 276 HKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTF--TLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMV 353 (494)
Q Consensus 276 hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~--~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~ 353 (494)
-|.+.++..+|+++.+++ .. +..... .......+ +...+.++....+..++|+.+.+++ ..++..++.++
T Consensus 250 gK~lggG~p~~av~~~~~-i~-~~~~~~---~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~ 321 (431)
T PRK06209 250 GKALGNGFAVSALAGKRE-YM-ELGGLE---HTDRERVFLLSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAK 321 (431)
T ss_pred hhhhcCCcccEEEEEHHH-HH-hhhccc---ccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHH
Confidence 588766555666666542 21 110000 00001111 1112233355666777788776554 45566666667
Q ss_pred HHHHHhh----CCCeEE--eecCCCccEEEEEecCCCCCC----HHHHHHHHHhcCceeeccccCCCCCCceEEEEEecc
Q 011057 354 LKEGLEK----TGRFNI--VSKDEGVPLVAFSLKDNKRHD----EFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIRE 423 (494)
Q Consensus 354 l~~~L~~----~~~~~~--~~~~~~~~~v~f~~~~~~~~~----~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~ 423 (494)
|++.|++ .+ +.. -......++..+... ..+.+ ...+.++|.++|++++. + +++.
T Consensus 322 l~~~L~~~~~~~~-~~~~vr~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gi~~p~------------l--~is~ 385 (431)
T PRK06209 322 LAAGVNEAAAEHG-LQDHVRVSGRPCCLTYSTLD-GNGQPSQAFRTLFLQETIRRGVLMPS------------L--VVSY 385 (431)
T ss_pred HHHHHHHHHHhCC-CCeEEEeecceEEEEEecCC-cccCCcHHHHHHHHHHHHHCCccccc------------c--cccc
Confidence 7776654 43 321 111111122221111 11111 22577888999997421 3 3346
Q ss_pred CCChHHHHHHHHHHHHHHHHHhc
Q 011057 424 DFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 424 ~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
.+|.++|+++++.|++++.++.+
T Consensus 386 ~ht~~dId~~l~~l~~~l~~~~~ 408 (431)
T PRK06209 386 AHGDADIERTIDAVHGALGVYRK 408 (431)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHH
Confidence 77999999999999999988743
No 372
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.36 E-value=1.5e-09 Score=111.37 Aligned_cols=348 Identities=12% Similarity=0.076 Sum_probs=191.6
Q ss_pred hcCCCCCcccccc----cCCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChh
Q 011057 52 LDGNPRLNLASFV----TTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSS 127 (494)
Q Consensus 52 ~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt 127 (494)
.+|+.++.+.++. -.+.+|.+.+++.+.+........ .....+.+.++.+.|.+++..... ......++++|+
T Consensus 55 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~-~~~~~~~~~~lAe~L~~~~p~~~~--~~~~~f~~~SGs 131 (459)
T PRK06931 55 VEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHT-LDLTTPLKDAFSEYLLSLLPGQGK--EYCLQFTGPSGA 131 (459)
T ss_pred CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccc-cccCCHHHHHHHHHHHHhCCCccc--cceEEEeCCCcH
Confidence 3566665544432 335578899888888765321111 112234555677788887743210 001235558999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcC------------CeeEEEeccCCccc-----
Q 011057 128 EAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFE------------VELKEVKLSEGYYV----- 189 (494)
Q Consensus 128 ~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G------------~~v~~v~~~~~~~~----- 189 (494)
||+..|++.++... | +.+|+ .....|....-+....| .++..+|.... +.
T Consensus 132 EAve~AlklAr~~t-------g----r~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 199 (459)
T PRK06931 132 DAVEAAIKLAKTYT-------G----RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHE-YRCPLGI 199 (459)
T ss_pred HHHHHHHHHHHHhc-------C----CCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCcc-ccccccC
Confidence 99999999997641 2 24455 45556765444443222 12334443210 10
Q ss_pred ---cCHHHH----HHhhhh------CCeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccc
Q 011057 190 ---MDPVKA----VEMVDE------NTICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIA 252 (494)
Q Consensus 190 ---~d~~~L----~~~i~~------~t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~ 252 (494)
-+.+++ ++.+.. +..+|++--.....|.+.| ++++.++|+++ |+++++|+++.++.-
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~------g~LlI~DEV~tGfGR 273 (459)
T PRK06931 200 GGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKH------GILLIVDEVQAGFAR 273 (459)
T ss_pred CchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEecchhcCCc
Confidence 122333 333331 2345554333334455533 78999999999 999999999976521
Q ss_pred cccCCcccc-cccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 253 PFLYPELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 253 ~~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
......+ .+++ ..|.+++ -|.+.++..+|.++.++. + +.+. .... ..+ ++.++....+..+.
T Consensus 274 --tG~~~a~~~~gv-~PDivt~--gK~l~gG~Pi~av~~~~~--~-~~~~--~~~~-----~~T--~~gnpla~aaala~ 336 (459)
T PRK06931 274 --TGKMFAFEHAGI-EPDIIVM--SKAVGGGLPLAVLGIKKE--F-DAWQ--PGGH-----TGT--FRGNQLAMATGLTT 336 (459)
T ss_pred --CchHHHhhhcCC-CCCEEEe--cccccCCcceeeeeeHHH--H-hhcc--CCCC-----CCC--CCCCHHHHHHHHHH
Confidence 1110011 1222 4788876 487766666777665532 2 2111 1111 112 22233455556667
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEeecCC-CccEEEEEecCCCC---------CC---HHHHHHHHHh
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLEKTG-RFNIVSKDE-GVPLVAFSLKDNKR---------HD---EFEVAELLRR 397 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~~---------~~---~~~l~~~L~~ 397 (494)
|+.+.+++ ..++..++.++|.+.|+++. ...++..-. ...++.+.+..... .+ ...+.+.+.+
T Consensus 337 L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (459)
T PRK06931 337 LKILKEEN---LAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFE 413 (459)
T ss_pred HHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHH
Confidence 77665554 45666666777777776541 111222211 33456666632110 01 2457778889
Q ss_pred cCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 398 FGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 398 ~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
+|+++... .....++|+.....+|++++|.+++.|++++.++-
T Consensus 414 ~Gvl~~~~-----~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 456 (459)
T PRK06931 414 NGLLLERG-----GRNGNVVRLLPPLLITQAECEEFIDRFEQALLAAV 456 (459)
T ss_pred CCcEEeec-----CCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 99986321 11235799988888999999999999999987654
No 373
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.35 E-value=1.5e-09 Score=102.87 Aligned_cols=324 Identities=14% Similarity=0.057 Sum_probs=192.4
Q ss_pred HHHHHHHHhccc---CCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhc
Q 011057 72 CDKLMMAAINKN---YVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAE 148 (494)
Q Consensus 72 ~~~~~~~~~~~~---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~ 148 (494)
+.+.....++.. .+.|+.+++..-+++.+.+.+.+-=|.+.+ ...++.|+|++.|+...+..+...
T Consensus 91 ai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~---p~dI~LT~GAS~ai~~il~l~~~~-------- 159 (475)
T KOG0258|consen 91 AIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPAD---PEDIFLTTGASPAIRSILSLLIAG-------- 159 (475)
T ss_pred HHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCC---HHHeeecCCCcHHHHHHHHHHhcC--------
Confidence 444444455543 345777889988888888888877785543 345999999999998777666432
Q ss_pred CCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccC-CccccCHHHHHHhhhh-----CCeEEEEeeCCCCcccc---c
Q 011057 149 GKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPVKAVEMVDE-----NTICVAAILGSTLNGEF---E 219 (494)
Q Consensus 149 g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~L~~~i~~-----~t~~vv~~~~~~~tG~~---~ 219 (494)
.++-|++|-+-++-+...+..+|...+..-+|+ .+|.+|.++|++.+++ +++++++.+|-||||.+ +
T Consensus 160 ----~~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e 235 (475)
T KOG0258|consen 160 ----KKTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEE 235 (475)
T ss_pred ----CCCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHH
Confidence 235699999999988888899999888777774 5699999999998875 47899999999999998 6
Q ss_pred CHHHHHHHHHHhhcccCCCceEEEeccccccccc----ccC-CcccccccCC---CceEEEE-cCcc--cCCcCCceEEE
Q 011057 220 DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAP----FLY-PELEWDFRLP---LVKSINV-SGHK--YGLVYAGIGWV 288 (494)
Q Consensus 220 ~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~----~~~-~~~~~~~~~~---~~D~~~~-~~hK--~l~~p~g~G~~ 288 (494)
.+++|..+|+++ ++.++.|++|-..+.. |.. ...-..++-. .+-.+++ +.+| ++-++.+.|++
T Consensus 236 ~ie~i~~fa~~~------~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYm 309 (475)
T KOG0258|consen 236 NIEGIICFAAEE------GLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYM 309 (475)
T ss_pred HHHHHHHHHHHc------CeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCee
Confidence 789999999999 9999999988543210 100 0000011111 2222222 2233 23233444554
Q ss_pred EEeCC--CCccccccc-----ccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhC
Q 011057 289 IWRNK--EDLPEELIF-----HINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKT 361 (494)
Q Consensus 289 ~~~~~--~~~~~~~~~-----~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~ 361 (494)
=+-+. ......... .+...+.......++-..++-....++.+- -..+.+.+...++.+.+.+..+
T Consensus 310 Ev~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~E-------kd~il~~l~~ra~l~~~~~ns~ 382 (475)
T KOG0258|consen 310 ESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSE-------KDGILSSLRSRAKLTEDAFNSL 382 (475)
T ss_pred ecccCChhHHHHHHHHHhhhhcCCccchhhhceecCCCCCCCcchhhhhhh-------hHhHHHHHHHHhHHHHHHHhhc
Confidence 32221 110000000 001010000000000011111112222211 1346667778888999999999
Q ss_pred CCeEEeecCCCccEEEEE---ecCC-------CCCCHHHH--HHHHHhcCceeeccccCCCCCCceEEEEEeccCC
Q 011057 362 GRFNIVSKDEGVPLVAFS---LKDN-------KRHDEFEV--AELLRRFGWIVPAYTMPADAQHITVLRVVIREDF 425 (494)
Q Consensus 362 ~~~~~~~~~~~~~~v~f~---~~~~-------~~~~~~~l--~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~ 425 (494)
.++..... +..+..|- ++.. .++..+.+ .+.|...||.+......+...|..-+|.++-+.-
T Consensus 383 ~gi~cn~~--qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~ 456 (475)
T KOG0258|consen 383 EGISCNPV--QGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG 456 (475)
T ss_pred CceeeccC--ccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch
Confidence 88887654 45566653 2110 12222233 3556778998755544444567778999987543
No 374
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.24 E-value=1.2e-08 Score=94.85 Aligned_cols=326 Identities=13% Similarity=0.114 Sum_probs=183.4
Q ss_pred CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
+-+|.+.+++.+-.+.-.. .+-..+....-+..+.+.+++|++. ++-++.|.||+-.++..+|+- .-+.
T Consensus 75 hchpki~~aLqeq~~kLtl--ssrafYnd~~~~f~~~vt~lf~~~k-------vlpmnTGaEa~Eta~KLaR~w-gy~~- 143 (427)
T KOG1402|consen 75 HCHPKIIKALQEQADKLTL--SSRAFYNDVLGEFAEYVTKLFGYDK-------VLPMNTGAEAVETACKLARKW-GYRK- 143 (427)
T ss_pred CCCHHHHHHHHHHHhHhhh--hhHHHhhhhHHHHHHHHHHhcCcce-------eeecccchhHHHHHHHHHHHH-HHhh-
Confidence 3468888887766654222 1111344455567788999999975 777889999999999988742 2111
Q ss_pred hcCCCCCCCeEEeCC-Ccch-------------HHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCC-eEEEEeeC
Q 011057 147 AEGKPFDKPNIVTGA-NVQV-------------CWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENT-ICVAAILG 211 (494)
Q Consensus 147 ~~g~~~~~~~vi~~~-~~h~-------------s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t-~~vv~~~~ 211 (494)
.+.+..+..|+... ..|. ++....-.+-..+..||. -|.++|+.++++.. +++++--.
T Consensus 144 -K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y------~d~eale~~l~~~~vaaFivEPI 216 (427)
T KOG1402|consen 144 -KNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY------GDAEALEVALKSPNVAAFIVEPI 216 (427)
T ss_pred -ccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc------CCHHHHHHHhcCCCeeEEEeecc
Confidence 12221122233221 2221 222221111112444442 36799999998643 44444444
Q ss_pred CCCcccccC----HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcC-CceE
Q 011057 212 STLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVY-AGIG 286 (494)
Q Consensus 212 ~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~G 286 (494)
.-..|.+-| +++..++|++| +++++.|+.|.+..- ...-+..+..--..|.+.+ .|.+.++ ...+
T Consensus 217 QGEaGVvvP~~GYL~~vreLCtky------nvl~I~DEvQTGl~R--TGk~la~d~env~PDivil--gKalSGG~~Pvs 286 (427)
T KOG1402|consen 217 QGEAGVVVPPPGYLKKVRELCTKY------NVLLIADEVQTGLAR--TGKLLACDYENVRPDIVIL--GKALSGGVYPVS 286 (427)
T ss_pred ccccceEeCCchhHHHHHHHHHhh------cEEEEehhhhhcccc--cCcEEEeehhhcCCCeEEE--eccccCCeeeeE
Confidence 446677743 88999999999 999999999976321 1111222332224566654 3665432 2334
Q ss_pred EEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCC-eE
Q 011057 287 WVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGR-FN 365 (494)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~ 365 (494)
.+++.++ .+.. |-.+.. ..++.+. +.......++|+.+.+ ++..+++..+-..|+.+|.+++. |.
T Consensus 287 avl~~~~-im~~-------~~pgeH-gsTyggN--pLg~~vaiAalevi~e---ekL~era~~lG~~l~~~L~~l~~~~p 352 (427)
T KOG1402|consen 287 AVLADDD-IMLN-------IKPGEH-GSTYGGN--PLGCAVAIAALEVIVE---EKLVERAAKLGEILRDQLNKLQKKFP 352 (427)
T ss_pred EEEecHH-HHhc-------cCCCcc-ccccCCC--hHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcccccc
Confidence 4444332 2211 111111 0011111 1222334455555544 46778888899999999998862 21
Q ss_pred -EeecCC-CccEEEEEecC--CCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 366 -IVSKDE-GVPLVAFSLKD--NKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 366 -~~~~~~-~~~~v~f~~~~--~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
++..-. +.-++.+.+.+ .++.++.+++-+|.++|...-+ .+..++|++---.++++|++.-++.|+..+
T Consensus 353 ~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkp-------tH~~IiRfaPPL~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 353 HVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKP-------THGNIIRFAPPLVISEEDLREGIEAIEKTI 425 (427)
T ss_pred chhheeeccceEEEEEeccccccchhHHHHHHcccccccccCC-------CCCCeEEecCCcccCHHHHHHHHHHHHHHh
Confidence 122111 33344455542 2456788999999999987422 345589998777778888887777776654
No 375
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.23 E-value=1.9e-09 Score=102.74 Aligned_cols=346 Identities=14% Similarity=0.080 Sum_probs=198.2
Q ss_pred hhhhcCCCC-CcccccccC------CChHHHHHHHHHHhcccC-CCCCCChhhHHHHHHHHHHHHH-HhCCCCCCC--CC
Q 011057 49 ELMLDGNPR-LNLASFVTT------WMEPECDKLMMAAINKNY-VDMDEYPVTTELQNRCVNIIAR-LFNAPLEDS--ET 117 (494)
Q Consensus 49 ~~~~~~~~~-~~~~~~~~~------~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~le~~~~~~la~-l~g~~~~~~--~~ 117 (494)
.+..++.|. +|++-+++- |.-+.|.++-...+++.. -.|-.-.+.....++ +++ +||.+.... ..
T Consensus 19 ~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~----~~~llFG~d~~~l~~~R 94 (396)
T COG1448 19 AFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEA----VQKLLFGADSPALAEDR 94 (396)
T ss_pred HHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHH----HHHHhcCCCcHHHHhhh
Confidence 334454444 565554432 112345555444443321 122222244444444 333 467553211 23
Q ss_pred cceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEec-cCCccccCHHHHH
Q 011057 118 AVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKL-SEGYYVMDPVKAV 196 (494)
Q Consensus 118 ~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~ 196 (494)
...+-|.|||.|+.++...+.+.. .+..|.+|++++..........|++++..|. |..+..+|.+.+.
T Consensus 95 v~t~Qt~GGTGAL~~~A~fl~~~~-----------~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~ml 163 (396)
T COG1448 95 VATVQTLGGTGALRVAADFLARFF-----------PDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGML 163 (396)
T ss_pred HhheecCCcchHHHHHHHHHHHhC-----------CCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHH
Confidence 457788999999998877775531 1246999999999888888889999999987 3344569999988
Q ss_pred Hhhhh---CCeEEEEeeCCCCcccc---cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcc--cccccCCCc
Q 011057 197 EMVDE---NTICVAAILGSTLNGEF---EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPEL--EWDFRLPLV 268 (494)
Q Consensus 197 ~~i~~---~t~~vv~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~--~~~~~~~~~ 268 (494)
+.+.. +..++.=....||||.- +.+++|.++.++. +.+-++|=||-||...+..+.+ +.-.....-
T Consensus 164 a~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r------~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~ 237 (396)
T COG1448 164 ADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER------GLIPFFDIAYQGFADGLEEDAYALRLFAEVGPE 237 (396)
T ss_pred HHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc------CCeeeeehhhhhhccchHHHHHHHHHHHHhCCc
Confidence 87765 33334445678899986 4578899999999 9999999999776432211111 100011111
Q ss_pred eEEEEcCcccCCc-CCceEEEEEeC--CCCcccccccccCCCCCCCCCcccccCcch--HHHHHHH---HHHHHhcHhHH
Q 011057 269 KSINVSGHKYGLV-YAGIGWVIWRN--KEDLPEELIFHINYLGADQPTFTLNFSKGS--SQVIAQY---YQLIRLGFEGY 340 (494)
Q Consensus 269 D~~~~~~hK~l~~-p~g~G~~~~~~--~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~--~~~~a~~---~al~~l~~~g~ 340 (494)
-.++.|+.|.+.- +-++|.+.+-. .+.....+..-....+... .++|. ..+.+.. ..|+..-+..+
T Consensus 238 ~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~y------SnPP~~Ga~vva~IL~~p~Lra~W~~El 311 (396)
T COG1448 238 LLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNY------SNPPAHGAAVVATILNNPELRAEWEQEL 311 (396)
T ss_pred EEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhcc------CCCchhhHHHHHHHhCCHHHHHHHHHHH
Confidence 5667788887632 23445544332 2111111110000000000 11111 1111111 12344444556
Q ss_pred HHHHHHHHHHHHHHHHHHhhCC---CeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEE
Q 011057 341 RNVMENCHENAMVLKEGLEKTG---RFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVL 417 (494)
Q Consensus 341 ~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~l 417 (494)
..+++++.+++..|.+.|++.+ .|..+.. +.+++++. +.+.+++.....+.||++.. .|
T Consensus 312 ~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~--Q~GMFsy~-----Gls~~QV~rLree~~IY~v~-------sG---- 373 (396)
T COG1448 312 EEMRQRILEMRQALVDALKALGAPRNFDFIIS--QRGMFSYT-----GLSPEQVDRLREEFGIYLVA-------SG---- 373 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcccchHhh--cCceeecC-----CCCHHHHHHHHHhccEEEec-------CC----
Confidence 7889999999999999999843 2555544 45676655 35666666555667886422 12
Q ss_pred EEEeccCCChHHHHHHHHHHHHH
Q 011057 418 RVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 418 Rvs~~~~~t~~~id~~i~~l~~~ 440 (494)
|+++.. .+...|+.+.++|.++
T Consensus 374 Ri~vaG-l~~~ni~~va~ai~~v 395 (396)
T COG1448 374 RINVAG-LNTSNIDYVAKAIAAV 395 (396)
T ss_pred eeeecc-CChhhHHHHHHHHHhh
Confidence 888864 5667788888887765
No 376
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.16 E-value=4.3e-09 Score=101.99 Aligned_cols=223 Identities=18% Similarity=0.112 Sum_probs=139.8
Q ss_pred ChHHHHHHHHHHhcccCCCCCCChhhHHHHH---HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHH
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYPVTTELQN---RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNK 144 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~---~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~ 144 (494)
..|++.+++...++.... .+.+........ .+.+.++.+.|... +.+++..+.|+++.+.+...
T Consensus 39 ~~~e~iea~~~~~~~~v~-Le~~l~~g~~~~R~~~~~~~~~~~~~aea-------~~ivnnn~aAVll~~~al~~----- 105 (395)
T COG1921 39 YSPEAIEAMKEAMRAPVE-LETDLKTGKRGARLTELAELLCGLTGAEA-------AAIVNNNAAAVLLTLNALAE----- 105 (395)
T ss_pred CCHHHHHHHHHHhcccce-eeeecccchhhHHHHHHHHHHhcccchhh-------eeeECCcHHHHHHHHhhhcc-----
Confidence 357777777777665321 111111111111 34444555555543 77888888887766655522
Q ss_pred HHhcCCCCCCCeEEeCC-----CcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccc-
Q 011057 145 RKAEGKPFDKPNIVTGA-----NVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEF- 218 (494)
Q Consensus 145 ~~~~g~~~~~~~vi~~~-----~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~- 218 (494)
+.+++++. ..|+++...+++.|++++.+... ......+++.+|.++|.++.-++.++. |..
T Consensus 106 ---------~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~t---n~t~~~d~~~AIne~ta~llkV~s~~~-~f~~ 172 (395)
T COG1921 106 ---------GKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTT---NRTHLKDYELAINENTALLLKVHSSNY-GFTG 172 (395)
T ss_pred ---------CCeEEEEccccccCCCCChhHHHHHcCCEEEEeccc---CcCCHHHHHHHhccCCeeEEEEeeccc-cccc
Confidence 12444322 58899999999999999888753 357889999999999988877776654 443
Q ss_pred -cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcc
Q 011057 219 -EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLP 297 (494)
Q Consensus 219 -~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~ 297 (494)
.++++++++||++ ++++++|.+.|.-+- ..+..+ .+-..|+|.+++|++|.+.+|. .|+++-++ +++
T Consensus 173 ~l~~~~l~~ia~~~------~lpvivD~aSg~~v~--~e~~l~-~~la~GaDLV~~SgdKllgGPq-aGii~GkK-elI- 240 (395)
T COG1921 173 MLSEEELVEIAHEK------GLPVIVDLASGALVD--KEPDLR-EALALGADLVSFSGDKLLGGPQ-AGIIVGKK-ELI- 240 (395)
T ss_pred cccHHHHHHHHHHc------CCCEEEecCCccccc--cccchh-HHHhcCCCEEEEecchhcCCCc-cceEechH-HHH-
Confidence 3688899999999 999999999987431 111111 1113489999999999998876 67665443 333
Q ss_pred cccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcH
Q 011057 298 EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGF 337 (494)
Q Consensus 298 ~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~ 337 (494)
+.+...+-...-. .. -..+.++.++|+.+..
T Consensus 241 ~~lq~~~l~Ralr-------v~--K~tla~l~~aLe~y~~ 271 (395)
T COG1921 241 EKLQSHPLKRALR-------VD--KETLAALEAALELYLQ 271 (395)
T ss_pred HHHHhhhhhhhhh-------cC--cHhHHHHHHHHHHHcC
Confidence 2222221111111 11 1456778888877654
No 377
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.15 E-value=3.5e-08 Score=93.86 Aligned_cols=336 Identities=16% Similarity=0.069 Sum_probs=190.7
Q ss_pred CcccccccCCChHHHHHHHHHHhcccC---CCC---CCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHH
Q 011057 58 LNLASFVTTWMEPECDKLMMAAINKNY---VDM---DEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIM 131 (494)
Q Consensus 58 ~~~~~~~~~~~~p~~~~~~~~~~~~~~---~~~---~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~ 131 (494)
+||+++...-+++.+..+-.+.++-+. ... ..+.....+..+.++.+++|+++|++ ..++|..||..+-+
T Consensus 7 ~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~----Y~VlflqGGat~qf 82 (365)
T COG1932 7 YNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDD----YKVLFLQGGATGQF 82 (365)
T ss_pred CCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCccHHHH
Confidence 466665444444434333333333222 111 23446677778889999999999974 56888886554443
Q ss_pred -HHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcc--hHHHHHHHHcCCe--eEEEeccC-C-ccccCHHHHHHhhhhCCe
Q 011057 132 -LAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQ--VCWEKFARYFEVE--LKEVKLSE-G-YYVMDPVKAVEMVDENTI 204 (494)
Q Consensus 132 -~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h--~s~~~~~~~~G~~--v~~v~~~~-~-~~~~d~~~L~~~i~~~t~ 204 (494)
++.+.+... +..-++...++ .+...+ +..+.. +..+.... + ....+++... +.++..
T Consensus 83 ~~~p~nLl~~-------------~~~~yv~~g~Ws~~a~~eA-~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~a 146 (365)
T COG1932 83 AMAPMNLLGK-------------RGTDYVDTGAWSEFAIKEA-KKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDA 146 (365)
T ss_pred HHHHHhhhcc-------------cCceeEeeeehhHhHHHHH-HHhcccccccccceeccCccCCCChhhcc--cCCCcc
Confidence 444444321 01103333333 344444 444432 22222111 1 1223333332 334445
Q ss_pred EEEEeeCCCCcccccC-HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCC
Q 011057 205 CVAAILGSTLNGEFED-VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYA 283 (494)
Q Consensus 205 ~vv~~~~~~~tG~~~~-l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~ 283 (494)
.|..|...|.+|.--| ...+ +.+.+++.|.....+..+ +.+.+.|++.++.+|.+ +|.
T Consensus 147 yv~~~~NeTi~Gv~v~~~p~~-----------~~~~~~v~D~SS~ilsr~---------iDvsk~dviyagaQKnl-Gpa 205 (365)
T COG1932 147 YVHFCWNETISGVEVPELPDI-----------GSDGLLVADASSAILSRP---------IDVSKYDVIYAGAQKNL-GPA 205 (365)
T ss_pred EEEEecCCcccceEccCCCCC-----------CCCceEEEecccHHhcCC---------CChhHcceEEEehhhcc-Ccc
Confidence 5888888888898754 1211 114789999988765432 23347899999999997 678
Q ss_pred ceEEEEEeCCCCcccc----cccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhc-HhHHHHHHHHHHHHHHHHHHHH
Q 011057 284 GIGWVIWRNKEDLPEE----LIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-FEGYRNVMENCHENAMVLKEGL 358 (494)
Q Consensus 284 g~G~~~~~~~~~~~~~----~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~-~~g~~~~~~~~~~~a~~l~~~L 358 (494)
|.+++++|+...- +. ++...+|...-... .+..|++...+.-+-..++.+. ..|++.+.++..+.++.|.+.+
T Consensus 206 GltvvIvr~~~l~-r~~~~~~P~if~y~~~~~~~-s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~i 283 (365)
T COG1932 206 GLTVVIVRPDLLE-RAESYTLPSIFDYLTHADNG-SMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWI 283 (365)
T ss_pred ceEEEEEcHHHHh-cccccCCchHhhchhhhccC-CccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999875321 11 11112233221111 1223454444433334455553 4578899999999999999999
Q ss_pred hhCCCeEE-eecC-CCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHH
Q 011057 359 EKTGRFNI-VSKD-EGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLD 436 (494)
Q Consensus 359 ~~~~~~~~-~~~~-~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~ 436 (494)
.+.+-..- +.+. .+...|+|.+.. ..++ ..+.+.+.++|...-.. . ... +-+|+++.+.+..++++.|++-
T Consensus 284 d~s~fy~~~v~~~~RS~mnV~f~~~~-~~ld-~~fv~eae~~gl~~lkG--h-r~v--gGmRasiynA~~~e~veaL~~f 356 (365)
T COG1932 284 DKSDFYRNLVAKANRSRMNVTFTLVD-AELD-KGFVAEAEAAGLIYLKG--H-RSV--GGLRASIYNAVPLEDVEALTDF 356 (365)
T ss_pred HhCCccccccchhhccceeEEEEcCc-HHHH-HHHHHHHHHcCCceecc--c-cCC--CceeeeeecCCCHHHHHHHHHH
Confidence 99862221 1121 145567888753 2233 46777777788764221 1 111 2299999999999999888877
Q ss_pred HHHHHHH
Q 011057 437 ITKVLHE 443 (494)
Q Consensus 437 l~~~~~~ 443 (494)
|+.+.++
T Consensus 357 m~~f~~~ 363 (365)
T COG1932 357 MDWFEET 363 (365)
T ss_pred HHHHHHh
Confidence 7776554
No 378
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.11 E-value=2.1e-08 Score=95.51 Aligned_cols=333 Identities=15% Similarity=0.060 Sum_probs=186.0
Q ss_pred cCCCCCccccccc----CCChHHHHHHHHHHhcccCCCCC--CChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecCh
Q 011057 53 DGNPRLNLASFVT----TWMEPECDKLMMAAINKNYVDMD--EYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGS 126 (494)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~gg 126 (494)
+|+.++.+.++.. .+-+|.+.+++.+-+..-+.... ..+-..+ +.+.|.+++--+- ..+.|+++|
T Consensus 48 ~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~~pi~~----~Ae~L~s~~P~~l-----~~vfF~nsG 118 (442)
T KOG1404|consen 48 EGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLNPPIHD----LAEALVSKLPGDL-----KVVFFVNSG 118 (442)
T ss_pred CCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccccCCcHHH----HHHHHHHhCCCCc-----eEEEEecCC
Confidence 3444554444432 24578887777766543222111 1222222 4444666553322 359999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHHHcCCeeEEEeccCC-----------c----cc-
Q 011057 127 SEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFARYFEVELKEVKLSEG-----------Y----YV- 189 (494)
Q Consensus 127 t~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~~v~~v~~~~~-----------~----~~- 189 (494)
+|||-+++++++..+.. -.|| .....|.+...++...|+.....+.+.. - +.
T Consensus 119 sEANelal~mar~Yt~~-----------~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~ 187 (442)
T KOG1404|consen 119 SEANELALKMARLYTGN-----------LDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGG 187 (442)
T ss_pred chHHHHHHHHHHHhcCC-----------ceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCC
Confidence 99999999999876411 2444 4556777666666666655433322110 0 00
Q ss_pred ------cC--HHHHHHhhhh---CC-eEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEEEeccccccccc
Q 011057 190 ------MD--PVKAVEMVDE---NT-ICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAP 253 (494)
Q Consensus 190 ------~d--~~~L~~~i~~---~t-~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (494)
-| .+++++.+.. .+ .++++-...-.-|.+.+ +++..++|+++ |.+++.|+++.++.-
T Consensus 188 ~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~------Ggl~IaDEVqtGfGR- 260 (442)
T KOG1404|consen 188 SNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKR------GGLFIADEVQTGFGR- 260 (442)
T ss_pred CchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHc------CCEEEehhhhhcccc-
Confidence 01 1334444432 22 34444444444477754 78999999999 999999999987531
Q ss_pred ccCCcccccccCCC--ceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 254 FLYPELEWDFRLPL--VKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 254 ~~~~~~~~~~~~~~--~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
...-|-|...+ .|.++ .-|.++.+..+|.+++..+ . ...+.....|. +++ +.. +.......+.
T Consensus 261 ---tG~~wgfe~h~v~PDIvT--mAKgiGnG~Pl~AVvtt~E-I-a~v~~~~~~~f------nTy-ggn-P~a~avg~aV 325 (442)
T KOG1404|consen 261 ---TGHMWGFESHGVVPDIVT--MAKGIGNGFPLGAVVTTPE-I-ADVLNQKSSHF------NTY-GGN-PVACAVGLAV 325 (442)
T ss_pred ---ccccccccccCCCccHHH--HHhhccCCCcceeeecCHH-H-HHHHHhccccc------ccc-CCC-chhHHHHHHH
Confidence 11122222111 35443 4588888788888887543 2 12221111111 111 122 2333334455
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEeecCCCcc-EEEEEecCCC-------CCCHHHHHHHHHhcCcee
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLEKTG-RFNIVSKDEGVP-LVAFSLKDNK-------RHDEFEVAELLRRFGWIV 402 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~~~-~v~f~~~~~~-------~~~~~~l~~~L~~~Gi~v 402 (494)
|+.+.++ ++.++..+...||.+.|.++. ..+++.+-...+ ++.+.+-... ......+.+.+.+.|+.+
T Consensus 326 L~Vikee---~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlv 402 (442)
T KOG1404|consen 326 LKVIKEE---NLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLV 402 (442)
T ss_pred HHHHHHH---hHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeee
Confidence 6666554 566777888999999998874 366666643222 3444442211 111346788999999987
Q ss_pred eccccCCCCCCceEEEEEeccCCChHHHHHHHH
Q 011057 403 PAYTMPADAQHITVLRVVIREDFSRTLAERLVL 435 (494)
Q Consensus 403 ~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~ 435 (494)
.- ....| .++|++--..+|.+|+|-+++
T Consensus 403 g~----g~i~G-~vfriaPPlciT~edi~f~~~ 430 (442)
T KOG1404|consen 403 GK----GGIHG-NVFRIAPPLCITKEDIDFAVE 430 (442)
T ss_pred ec----ccccc-eEEEecCCeeccHHHHHHHHH
Confidence 22 12233 489999888889999954444
No 379
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.10 E-value=1.3e-07 Score=90.78 Aligned_cols=343 Identities=14% Similarity=-0.010 Sum_probs=176.0
Q ss_pred CCChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHH
Q 011057 66 TWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKR 145 (494)
Q Consensus 66 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~ 145 (494)
.+..|++.+++.+-++.-......+-....+ ++.+.+.+..+-.. ...+.|.++|||||..|+..+++....+
T Consensus 71 Ghanpev~ral~~q~~k~~hs~~~~~t~eav--~l~~~l~~~~~~~~----~~rvff~nsGTeAne~ALK~Ark~~~~~- 143 (433)
T KOG1401|consen 71 GHANPEVARALAEQAKKLGHSSNGYFTLEAV--ELEEVLSAVLGKGS----AERVFFCNSGTEANETALKFARKFTGKK- 143 (433)
T ss_pred CCCCHHHHHHHHHHHhhheeccCccccHHHH--HHHHHHHhcccCCC----ccEEEEecCCcHHHHHHHHHHHHhhccc-
Confidence 3557899888887766543322222122222 24444555553322 2459999999999999999998753221
Q ss_pred HhcCCCCCCC-eEEeCCCcchHHHHHHHHcCCeeEEEecc---CC---ccccCHHHHHHhhhhCC---eEEEEeeCCCCc
Q 011057 146 KAEGKPFDKP-NIVTGANVQVCWEKFARYFEVELKEVKLS---EG---YYVMDPVKAVEMVDENT---ICVAAILGSTLN 215 (494)
Q Consensus 146 ~~~g~~~~~~-~vi~~~~~h~s~~~~~~~~G~~v~~v~~~---~~---~~~~d~~~L~~~i~~~t---~~vv~~~~~~~t 215 (494)
.+..+. .|-+-...|.-..-++...+..-...|.+ ++ .-.-|+.+|++.++... .+|++--..-.-
T Consensus 144 ----~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaG 219 (433)
T KOG1401|consen 144 ----HPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAG 219 (433)
T ss_pred ----CCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCC
Confidence 011111 34456667754433333333322222211 11 11357899999998765 455554444444
Q ss_pred ccc--cC--HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccCCCceEEEEcCcccCCcCCceEEEEE
Q 011057 216 GEF--ED--VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVIW 290 (494)
Q Consensus 216 G~~--~~--l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~g~G~~~~ 290 (494)
|.+ +| +..|.++|+++ +++++.|+++-++.- ....... .++ -..|.++ .-|.+.++..+|..++
T Consensus 220 G~~p~~peFl~~L~k~C~~~------~vl~I~DEV~tG~gR--~g~~~a~e~~~-~~PDI~t--~aK~L~gGlPigA~~v 288 (433)
T KOG1401|consen 220 GIIPADPEFLIGLRKECDDN------GVLLIFDEVQTGLGR--LGYGWAQEYFG-VTPDITT--VAKPLGGGLPIGATGV 288 (433)
T ss_pred CcccCCHHHHHHHHHHHhhc------CceEEeehhhhCccc--cchHHHHHHhC-cCCccee--ehhhccCCceeEEEee
Confidence 554 33 57799999999 999999999976421 1111111 111 1356665 4498888888899888
Q ss_pred eCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHh-HHHHHHHHHHHHHHHHHHHHhhCCCeEEeec
Q 011057 291 RNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFE-GYRNVMENCHENAMVLKEGLEKTGRFNIVSK 369 (494)
Q Consensus 291 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (494)
+++ +.+.+......+. ..++ +.++....+...+|..+.+. .+++.......+++.+.+.+.+.+.-..-.-
T Consensus 289 ~~k--V~~~i~~~~~l~h----g~Tf--~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~ 360 (433)
T KOG1401|consen 289 RDK--VAEMISPGDHLYH----GGTF--SGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGV 360 (433)
T ss_pred hHH--HHhhcCCCCcccc----Cccc--CCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeee
Confidence 764 2222222111111 1111 12222333344555555443 3444555555677777777766553221111
Q ss_pred CCCccEEEEEecCC--CCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEE-EeccCCChHHHHHHHHHHHHHHHHHh
Q 011057 370 DEGVPLVAFSLKDN--KRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRV-VIREDFSRTLAERLVLDITKVLHELD 445 (494)
Q Consensus 370 ~~~~~~v~f~~~~~--~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRv-s~~~~~t~~~id~~i~~l~~~~~~l~ 445 (494)
. +..++.+.+..+ +..+...-...|...++... + ..+..+.++ .+...++.|.++++++.+.+.+.++.
T Consensus 361 g-rgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~----~--~~gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 361 G-RGLVIGFEFEGPVYKFADAAREQGLLILTLGKGL----L--EEGVRIAPIYLLTVEHTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred e-eEEEEEEEEeechhhhhhhhhhhhHHHHHHhccc----c--cceEEEeccccccccCcHHHHHHHHHHHHHHHHHhc
Confidence 1 233444444322 11122222223333322210 0 011111221 22334568889999999998888765
No 380
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.01 E-value=9.4e-07 Score=95.83 Aligned_cols=340 Identities=14% Similarity=0.008 Sum_probs=180.0
Q ss_pred ChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHh
Q 011057 68 MEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA 147 (494)
Q Consensus 68 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~ 147 (494)
.+|++.+++.+.++....... .....+-..++.++|.+..+-+. ...+.|+++|++|+..|++.+++.+..++
T Consensus 383 ~~p~I~~Ai~~Qa~rl~hv~~-~~~~hepa~~LAe~L~~~~~~~~----l~rVffs~sGSeAvE~AlKmA~r~y~~~~-- 455 (817)
T PLN02974 383 LQPELARAVAYAAGRYGHVMF-PENVHEPALRAAELLLGGPGKGW----ASRVFFSDNGSTAIEVALKMAFRKFIVDH-- 455 (817)
T ss_pred CCHHHHHHHHHHHhhCCcccc-CccCCHHHHHHHHHHHhccCCCC----CCEEEECCchHHHHHHHHHHHHHHHHHhc--
Confidence 378899999888876432211 01122223346666776443110 12489999999999999999976544321
Q ss_pred cCCCC-----------CCCeEE-eCCCcchHHHHHHHHcCCe--------------eEEEecc-------------CCc-
Q 011057 148 EGKPF-----------DKPNIV-TGANVQVCWEKFARYFEVE--------------LKEVKLS-------------EGY- 187 (494)
Q Consensus 148 ~g~~~-----------~~~~vi-~~~~~h~s~~~~~~~~G~~--------------v~~v~~~-------------~~~- 187 (494)
|.+. .+.+|| .....|....-++...|.. ...++.. +..
T Consensus 456 -G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~ 534 (817)
T PLN02974 456 -GFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGF 534 (817)
T ss_pred -CCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccc
Confidence 2110 133555 4555675444444333210 0011100 000
Q ss_pred ----------cc-----cC------------HHHHHHhhhh-------CCeEEEEeeC--CCCcccccC----HHHHHHH
Q 011057 188 ----------YV-----MD------------PVKAVEMVDE-------NTICVAAILG--STLNGEFED----VKLLNDL 227 (494)
Q Consensus 188 ----------~~-----~d------------~~~L~~~i~~-------~t~~vv~~~~--~~~tG~~~~----l~~I~~l 227 (494)
+. .| .+.+++.|.. +..+-++..| ...-|.+.| +++|.++
T Consensus 535 ~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~l 614 (817)
T PLN02974 535 SSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQV 614 (817)
T ss_pred cccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHH
Confidence 00 00 2456666642 2334444455 244466633 7899999
Q ss_pred HHHhhcccCCCceEEEecccccccccccCCccccc-ccCCCceEEEEcCcccCCcC-CceEEEEEeCCCCcccccccccC
Q 011057 228 LAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWD-FRLPLVKSINVSGHKYGLVY-AGIGWVIWRNKEDLPEELIFHIN 305 (494)
Q Consensus 228 a~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~hK~l~~p-~g~G~~~~~~~~~~~~~~~~~~~ 305 (494)
|++| |+++|.|+++.|+.- .......+ +++ ..|.+++. |.+.++ ..+|.++++++ .. +.+... .
T Consensus 615 c~~~------gilLI~DEV~TGfGR--tG~~fa~e~~gv-~PDIi~~g--KgLtgG~~Plaa~l~~~~-I~-~~f~~~-~ 680 (817)
T PLN02974 615 CRSR------KIPVIFDEVFTGLWR--LGVESAWELLGC-KPDIACYA--KLLTGGLVPLAATLATEE-VF-EAFRGP-S 680 (817)
T ss_pred HHHh------CCEEEEeecccCCCc--ccchhhHHhcCC-CCCEEeec--ccccCCCCccEEEEEcHH-HH-Hhhccc-c
Confidence 9999 999999999987521 11111111 122 36888755 887766 36788877653 21 211100 0
Q ss_pred CCCCCCCCcccccCcchHHHHHHHHHHHHhcHhH-HHHHHHHHHHHHHHHHHHH----hhCCCeEEeecCCCccEEEEEe
Q 011057 306 YLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEG-YRNVMENCHENAMVLKEGL----EKTGRFNIVSKDEGVPLVAFSL 380 (494)
Q Consensus 306 y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g-~~~~~~~~~~~a~~l~~~L----~~~~~~~~~~~~~~~~~v~f~~ 380 (494)
-.... .....++.++....+..++|+.+.+++ ++...++..++..++.+.| ++.+.+.-+.. ...+.++.+
T Consensus 681 ~~~~~--~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg--~Gl~~~iel 756 (817)
T PLN02974 681 KLDAL--LHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVS--LGTVLALEL 756 (817)
T ss_pred ccCCc--ccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEe--eeeEEEEEE
Confidence 00000 011113333455566667777776542 2334444555555555555 33442221111 234566666
Q ss_pred cCCC---CCC---HHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHH
Q 011057 381 KDNK---RHD---EFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVL 441 (494)
Q Consensus 381 ~~~~---~~~---~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~ 441 (494)
.... +.+ ...+.+++. ++|++++.. + +++|+.....+++++++++++.|.+.+
T Consensus 757 ~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~-------G-nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 757 DAEGSGSGYSSLYARSVVRRLRREDGIYARPL-------G-NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred ecCCcccccchHHHHHHHHHHHHhCCEEEEec-------C-CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 4321 111 346778888 999987431 2 468887777889999998888887654
No 381
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.01 E-value=2e-07 Score=87.86 Aligned_cols=319 Identities=18% Similarity=0.219 Sum_probs=176.9
Q ss_pred CCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchH
Q 011057 87 MDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVC 166 (494)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s 166 (494)
|..+..+..|.+. +.+.+|+.. .+-|..|-.|-....-.+... |......+.++.+..|+-
T Consensus 75 Yagsrs~~~L~~a----vkdifGfq~-------~iPthQGRgAE~Il~~i~ik~--------~~~~pg~~~~~~sN~~Fd 135 (471)
T COG3033 75 YAGSRSYYALADA----VKDIFGFQY-------TIPTHQGRGAENILIPILIKK--------GEQEPGSKMVAFSNYHFD 135 (471)
T ss_pred hcccccHHHHHHH----HHHhcCcee-------eeeccCCccHHHHHHHHHhhh--------ccccCCccccccccceec
Confidence 4555666665554 777888864 566766555544333333221 111112356677788875
Q ss_pred HHH-HHHHcCCeeEEEeccCC---------ccccCHHHHHHhhhh----CCeEEEEee-CCCCccc---ccCHHHHHHHH
Q 011057 167 WEK-FARYFEVELKEVKLSEG---------YYVMDPVKAVEMVDE----NTICVAAIL-GSTLNGE---FEDVKLLNDLL 228 (494)
Q Consensus 167 ~~~-~~~~~G~~v~~v~~~~~---------~~~~d~~~L~~~i~~----~t~~vv~~~-~~~~tG~---~~~l~~I~~la 228 (494)
..+ -.+..|..++.+++++. .+.+|++.|++.|++ +...|+++. .|+.-|. +.+++++.+||
T Consensus 136 TTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia 215 (471)
T COG3033 136 TTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIA 215 (471)
T ss_pred chhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHH
Confidence 544 35667887777766531 258999999999986 233444443 3334454 47899999999
Q ss_pred HHhhcccCCCceEEEeccccccccccc---CCccc-ccc------cCCCceEEEEcCcccCCcCCceEEEEEeCCCCc--
Q 011057 229 AEKNKETGWDTPIHVDAASGGFIAPFL---YPELE-WDF------RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDL-- 296 (494)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~---~~~~~-~~~------~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~-- 296 (494)
++| ++.++.|+|-..--.-|. .+.++ |.+ ....+|-++.|++|=++++.| |++.++++...
T Consensus 216 ~ky------~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG-Gfl~~~D~~~fDv 288 (471)
T COG3033 216 KKY------DIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG-GFLCFKDDSFFDV 288 (471)
T ss_pred HHc------CCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc-cEEEecCccHHHH
Confidence 999 999999997632111111 12222 111 145789999999999888876 78888887532
Q ss_pred ccccc-cccCCCCCCCCCcccccCcchHHHHHHHHHHHH-hcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCcc
Q 011057 297 PEELI-FHINYLGADQPTFTLNFSKGSSQVIAQYYQLIR-LGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVP 374 (494)
Q Consensus 297 ~~~~~-~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~-l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 374 (494)
..... ....+-+. .+ .|...+..+.++..+|.. +.. .++++..+..+||.++|.+.| +.++.+. ...
T Consensus 289 y~~~~~~~V~~eG~--~t---YGgl~GrdmealAvGL~e~~~~----~yl~~Rv~Qv~YL~~~l~~~G-Vpi~~pa-GGH 357 (471)
T COG3033 289 YEECRTLVVVQEGF--PT---YGGLAGRDMEALAVGLREGVNF----DYLAHRVAQVQYLADGLEEAG-VPIVQPA-GGH 357 (471)
T ss_pred HHHHHhheEeeccc--cc---cCcccchhHHHHHHHHHHhcCc----HHHHHHHHHHHHHHHHHHhcC-CeeEecC-CCc
Confidence 11111 11111111 11 122333445455555532 222 345556667789999999987 8776654 222
Q ss_pred EEEEEe------cCCCCCCHHHHHHHHH-hcCceee---ccccCCCC-------CCceEEEEEec-cCCChHHHHHHHHH
Q 011057 375 LVAFSL------KDNKRHDEFEVAELLR-RFGWIVP---AYTMPADA-------QHITVLRVVIR-EDFSRTLAERLVLD 436 (494)
Q Consensus 375 ~v~f~~------~~~~~~~~~~l~~~L~-~~Gi~v~---~~~~~~~~-------~~~~~lRvs~~-~~~t~~~id~~i~~ 436 (494)
-+.+.. .+.+....+.++-.|. +.||-.. .+..+.+. .....+|+++. ...|.+.+|..++.
T Consensus 358 avfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a 437 (471)
T COG3033 358 AVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEA 437 (471)
T ss_pred eEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHH
Confidence 222221 1123345667776665 3454331 11111111 11257899984 34455666655555
Q ss_pred HHHHHH
Q 011057 437 ITKVLH 442 (494)
Q Consensus 437 l~~~~~ 442 (494)
++.+.+
T Consensus 438 ~~~l~e 443 (471)
T COG3033 438 FKALKE 443 (471)
T ss_pred HHHHHh
Confidence 554443
No 382
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.90 E-value=3.1e-06 Score=81.34 Aligned_cols=312 Identities=18% Similarity=0.117 Sum_probs=151.2
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCC--CC---CCCeEEeCCCcchHHHHHHHH
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGK--PF---DKPNIVTGANVQVCWEKFARY 173 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~--~~---~~~~vi~~~~~h~s~~~~~~~ 173 (494)
++++.+++++|++.+ .+++...+|-.++.-+.+ ..+.... .|. +. .+.+.++|.+.|-.-...++.
T Consensus 73 e~r~l~a~llgv~~~-----~viv~gNSSL~lM~d~i~--~a~~~G~--~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~ 143 (425)
T PF12897_consen 73 EARELFAELLGVPPE-----NVIVGGNSSLNLMHDTIS--RAMLHGV--PGSETPWCKEEKVKFLCPVPGYDRHFAITEH 143 (425)
T ss_dssp HHHHHHHHHHTS-GG-----GEEE-SS-HHHHHHHHHH--HHHHH----TT-SS-GGGSS--EEEEEES--HHHHHHHHH
T ss_pred HHHHHHHHHhCCCHH-----HEEEeccchHHHHHHHHH--HHHhcCC--CCCCCCchhccCceEEecCCCchHHHHHHHh
Confidence 467779999999872 344333333333322111 1111110 110 11 124789999998888888999
Q ss_pred cCCeeEEEeccCCccccCHHHHHHhhhhCC--eEEE-EeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccc
Q 011057 174 FEVELKEVKLSEGYYVMDPVKAVEMVDENT--ICVA-AILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGF 250 (494)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t--~~vv-~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~ 250 (494)
+|++.+.||.+++ ..|+|.+++++.+++ +.|. +-.-+||||..-.=+-+.++|.=.+.. .+..++-|.||+.-
T Consensus 144 ~Giemi~VpM~~d--GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA--~DFRI~WDNAY~vH 219 (425)
T PF12897_consen 144 FGIEMIPVPMTED--GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAA--PDFRIFWDNAYAVH 219 (425)
T ss_dssp CT-EEEEEEEETT--EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SS--TT-EEEEE-TTTT-
T ss_pred hCcEEEecCCCCC--CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCC--cCeEEEeecCceEe
Confidence 9999999999986 489999999997654 4443 334567999995444444444211100 18999999999865
Q ss_pred cccccCCccc-ccc-------cCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcch
Q 011057 251 IAPFLYPELE-WDF-------RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGS 322 (494)
Q Consensus 251 ~~~~~~~~~~-~~~-------~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~ 322 (494)
.+.-..+... .++ +-+.--..-.|..|.-+++.|++++..+... +.. +.....+ ..-+
T Consensus 220 hL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~N-l~~-~~~~~~~------------~tIg 285 (425)
T PF12897_consen 220 HLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEAN-LAW-IKKHLSV------------QTIG 285 (425)
T ss_dssp BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHH-HHH-HHHHHHH------------H-S-
T ss_pred eccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHH-HHH-HHHHhcC------------ceeC
Confidence 3300011100 011 2233344445677877788888887655431 110 0000000 0001
Q ss_pred HHHHHHHHHHHHhc-Hh-HHHHHHHHHHH--------HHHHHHHHHh-hCCCeEEeecCCCccEEEEEecCCCCCCHHHH
Q 011057 323 SQVIAQYYQLIRLG-FE-GYRNVMENCHE--------NAMVLKEGLE-KTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEV 391 (494)
Q Consensus 323 ~~~~a~~~al~~l~-~~-g~~~~~~~~~~--------~a~~l~~~L~-~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l 391 (494)
..=+-+..-.++++ .+ |+++.++++.+ ..+.|.+.|. ..+ +--...|...-+++|...+. .+..+
T Consensus 286 pdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~-ia~Wt~P~GGYFIsld~~~G---~Akrv 361 (425)
T PF12897_consen 286 PDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLG-IASWTKPKGGYFISLDVLDG---TAKRV 361 (425)
T ss_dssp --HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGT-SEEE---SBSS-EEEEESTT----HHHH
T ss_pred ccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCC-eeEecCCCCceEEEEecCCC---hHHHH
Confidence 22234445555554 34 67666666554 2334555555 333 44455554555888888653 57889
Q ss_pred HHHHHhcCceeec--cccCCC-CCCceEEEEEeccCCChHHHHHHHHHHHHHHH
Q 011057 392 AELLRRFGWIVPA--YTMPAD-AQHITVLRVVIREDFSRTLAERLVLDITKVLH 442 (494)
Q Consensus 392 ~~~L~~~Gi~v~~--~~~~~~-~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~ 442 (494)
++...+.|+.+.. -++|.. .....-+|++-+. -+.+|++..++.+..++.
T Consensus 362 V~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~-P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 362 VELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSY-PSLEELETAMDVFATCVK 414 (425)
T ss_dssp HHHHHHTTEE---TTTTSGGG--TTS-EEEE--SS-S-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCC-CCHHHHHHHHHHHHHHHH
Confidence 9999999998732 223322 2234569998764 355667666666555544
No 383
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.89 E-value=3.5e-07 Score=87.14 Aligned_cols=255 Identities=19% Similarity=0.149 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHhCCCCCCCCCcceee---ecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE-eCCCcchHHHHHHH
Q 011057 97 QNRCVNIIARLFNAPLEDSETAVGVG---TVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV-TGANVQVCWEKFAR 172 (494)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~---t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~ 172 (494)
++.+.+.+|+.||.+. .++ ..+||.|+.+++...+++ .++++ ++..-+-.+.+...
T Consensus 56 Rd~le~iyA~vfgaE~-------ALVRpq~vSGTHAi~~~Lfg~Lrp-------------GD~ll~~tG~PYDTL~~VIG 115 (403)
T PF06838_consen 56 RDKLERIYADVFGAED-------ALVRPQFVSGTHAIALALFGVLRP-------------GDELLSITGKPYDTLEEVIG 115 (403)
T ss_dssp HHHHHHHHHHHCT-SE-------EEEETTS-SHHHHHHHHHHHH--T-------------T-EEEESSSS--CCHHHHHT
T ss_pred HHHHHHHHHHHhCchh-------hhhcccccchHHHHHHHHHhcCCC-------------CCeEEEcCCCchhhHHHHhC
Confidence 4456667999999975 333 348999999998888663 14444 33333434555442
Q ss_pred ----------HcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCC----CCcccccCHHHHHHHHHHhhcccCCC
Q 011057 173 ----------YFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGS----TLNGEFEDVKLLNDLLAEKNKETGWD 238 (494)
Q Consensus 173 ----------~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~----~~tG~~~~l~~I~~la~~~~~~~~~~ 238 (494)
-.|+..+.|++.++ +.+|++.++++++++|++|.+.=.. -++=++++|+++++++|+.++ +
T Consensus 116 ~~g~~~GSL~e~Gi~Y~~v~L~~d-g~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p----~ 190 (403)
T PF06838_consen 116 IRGNGPGSLKEFGIKYREVPLTED-GTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINP----D 190 (403)
T ss_dssp SSSSSSSSTGGGT-EEEE--B-TT-SSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-T----T
T ss_pred CCCCCCCChHHhCceeEEEeecCC-CCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCC----C
Confidence 34677899999876 7999999999999999988886332 244566888888888888744 8
Q ss_pred ceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCC-ceEEEEEeCCCCcccc-cccccCCCCCCCCCccc
Q 011057 239 TPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEE-LIFHINYLGADQPTFTL 316 (494)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~G~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~ 316 (494)
++++||.+||.|+- . .+. .+ -++|.+..|.=|..+++. .+|..++.+.+..... .....+=++... ..++
T Consensus 191 ~iifVDNCYGEFvE--~-~EP-~~---vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~-G~t~ 262 (403)
T PF06838_consen 191 VIIFVDNCYGEFVE--T-QEP-TE---VGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEV-GATL 262 (403)
T ss_dssp SEEEEE-TTTTTTS--S-S-G-GG---GT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGS-S--T
T ss_pred eEEEEeCCcceecc--c-cCc-cc---cchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCcccccc-ccCc
Confidence 99999999999753 1 111 12 289999999999865432 2344444444332111 112222222211 1111
Q ss_pred ccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC--Ccc-EEEEEecCCCCCCHHHHHH
Q 011057 317 NFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE--GVP-LVAFSLKDNKRHDEFEVAE 393 (494)
Q Consensus 317 ~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~--~~~-~v~f~~~~~~~~~~~~l~~ 393 (494)
...|.. .-+++.+ .........-+......++++| |++.+... +.- +.++.+..+ .....+++
T Consensus 263 ~~~R~~--~QGlFlA---------P~vV~eAlKgaif~A~~fe~lG-~~v~P~~~~~R~DiIQai~l~~~--e~l~~FC~ 328 (403)
T PF06838_consen 263 GTNRLM--FQGLFLA---------PHVVGEALKGAIFAAALFEKLG-FEVSPKPDDPRSDIIQAIELGSP--EKLIAFCQ 328 (403)
T ss_dssp TTHHHH--HHHHHHH---------HHHHHHHHHHHHHHHHHHHHTT--EEES-TTS--SSS-EEEE-SSH--HHHHHHHH
T ss_pred chHHHH--HhHHhhc---------hHHHHHHHHHHHHHHHHHHHcC-CcCCCCCCCCCCceEEEEECCCH--HHHHHHHH
Confidence 111210 1111111 2344455555666666677777 99876542 333 455676432 12345666
Q ss_pred HHHhc
Q 011057 394 LLRRF 398 (494)
Q Consensus 394 ~L~~~ 398 (494)
.+.+.
T Consensus 329 ~iQ~~ 333 (403)
T PF06838_consen 329 GIQAA 333 (403)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 66553
No 384
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.87 E-value=6.9e-07 Score=88.38 Aligned_cols=259 Identities=16% Similarity=0.025 Sum_probs=139.6
Q ss_pred CChHHHHHHHHHHhcccCCCCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHH
Q 011057 67 WMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (494)
Q Consensus 67 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~ 146 (494)
+.+|.+.+++.+.++...... ......+...++.++|.++++-.. ..+.++++|++|+..|++.++..+..+ .
T Consensus 32 h~~p~i~~ai~~~~~~~~~~~-~~~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~sGseAve~Alkla~~~~~~~-~ 104 (339)
T PF00202_consen 32 HNHPEIAEAIAEQANKLNYVS-FSGFTHPEAAELAEKLAELFPGGL-----DRVFFANSGSEAVEAALKLARQYHNKR-A 104 (339)
T ss_dssp BT-HHHHHHHHHHHHHCSSCS-TTTSEEHHHHHHHHHHHHHSSTTE-----EEEEEESSHHHHHHHHHHHHHHHHHHT-H
T ss_pred CCccccchhHHHHhhhccccc-ccceeccchhhhhhhhhhcccccc-----ceeeeccCchHHHHHHHHHhhcccccc-c
Confidence 456888899888876643321 111223344457788999883321 458999999999999999998332211 1
Q ss_pred hcCCCCCCCeEEe-CCCcchHHHHHHHHcC------------CeeEEEeccCCcc----ccCHHHHHHhh----hhCCeE
Q 011057 147 AEGKPFDKPNIVT-GANVQVCWEKFARYFE------------VELKEVKLSEGYY----VMDPVKAVEMV----DENTIC 205 (494)
Q Consensus 147 ~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G------------~~v~~v~~~~~~~----~~d~~~L~~~i----~~~t~~ 205 (494)
..+ +..|+. ....|....-+....+ -.+..+|.++... .-..+.+++.+ .++..+
T Consensus 105 ~~~----r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaa 180 (339)
T PF00202_consen 105 YTG----RRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAA 180 (339)
T ss_dssp HHT----TTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEE
T ss_pred ccC----CceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEE
Confidence 111 245554 5556654333333221 1256666543100 00111222222 223445
Q ss_pred EEEeeCCCCccccc----CHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccCCCceEEEEcCcccCC
Q 011057 206 VAAILGSTLNGEFE----DVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRLPLVKSINVSGHKYGL 280 (494)
Q Consensus 206 vv~~~~~~~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~hK~l~ 280 (494)
|++--.....|.+. =+++|.++|+++ |+++++|+++.++.- ....... .+++ ..|.+++. |.+.
T Consensus 181 vivEPi~g~~G~~~~~~~~l~~l~~lc~~~------gillI~DEV~tG~gR--tG~~~a~~~~gv-~PDiv~~g--K~l~ 249 (339)
T PF00202_consen 181 VIVEPIQGEGGMIPPPPEYLRELRELCREH------GILLIADEVQTGFGR--TGKFFASEHYGV-DPDIVTFG--KGLG 249 (339)
T ss_dssp EEEESSBTTTTSBEE-TTHHHHHHHHHHHT------T-EEEEEETTTTTTT--TSSSSGHHHHTS-SSSEEEEE--GGGG
T ss_pred EEEeccccccCccccccchhhehccccccc------ccceecccccccccc--cCCccceecccc-cCcccccc--cchh
Confidence 55444444446552 279999999999 999999999987521 1111111 1222 46998876 8887
Q ss_pred cCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhh
Q 011057 281 VYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEK 360 (494)
Q Consensus 281 ~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~ 360 (494)
++..+|.++++++ .. +.+.. ... ..+ ...++....+..+.|+.+.++. ..++..++.++|.++|++
T Consensus 250 gG~p~sav~~~~~-i~-~~~~~--~~~-----~~T--~~g~p~~~aaa~~~l~~~~~~~---~~~~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 250 GGLPISAVLGSEE-IM-EAFQP--GSH-----GST--FGGNPLSCAAALATLEILEEED---LLERVRELGERLREGLRE 315 (339)
T ss_dssp TTSSEEEEEEEHH-HH-TTSCT--TSS-----TCT--TTT-HHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccccccch-hh-ccccc--ccc-----ccc--cccchHhhhhhhhHHHhhccHH---HHHHHHHHHHHHHHHHHH
Confidence 7788888888763 11 11100 001 111 1222345555666677666654 345555666666666654
Q ss_pred C
Q 011057 361 T 361 (494)
Q Consensus 361 ~ 361 (494)
+
T Consensus 316 l 316 (339)
T PF00202_consen 316 L 316 (339)
T ss_dssp H
T ss_pred H
Confidence 3
No 385
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.78 E-value=7.5e-09 Score=99.52 Aligned_cols=163 Identities=17% Similarity=0.176 Sum_probs=38.1
Q ss_pred HHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCc------chHHHHHHH
Q 011057 99 RCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANV------QVCWEKFAR 172 (494)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~------h~s~~~~~~ 172 (494)
.+.+.++.++|.+. .+++++...|+++++.++... .+||++.-. .+-+...++
T Consensus 51 ~v~~ll~~ltgAea-------A~VvNnnaAAv~L~l~~la~~--------------~EvIvsRGelVeiGgsFRip~vm~ 109 (367)
T PF03841_consen 51 HVEELLCELTGAEA-------ALVVNNNAAAVLLALNTLAKG--------------KEVIVSRGELVEIGGSFRIPDVMR 109 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc-------ccccccccccccccccccccc--------------cccccccccccccccccccccccc
Confidence 46677899999975 777888888887766655321 367776542 234666778
Q ss_pred HcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCc--ccc--cCHHHHHHHHHHhhcccCCCceEEEecccc
Q 011057 173 YFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLN--GEF--EDVKLLNDLLAEKNKETGWDTPIHVDAASG 248 (494)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~t--G~~--~~l~~I~~la~~~~~~~~~~~~l~vD~a~~ 248 (494)
..|++++.|-... ...+++++++|+++|.++.-.+.+|.. |.. -+++++.+++|+| ++++++|.+.|
T Consensus 110 ~sGa~lvEVGttN---~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~------~lp~i~DlgsG 180 (367)
T PF03841_consen 110 QSGARLVEVGTTN---RTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEH------GLPVIVDLGSG 180 (367)
T ss_dssp ------------------------------------------------------HHHHHHHHH------T--EEEE-TTH
T ss_pred ccccccccccccc---ccccccccccccccccccccccccccccccccccccHHHHHHHHhhc------CCcEEEECCCC
Confidence 8899998887643 467889999999999999888877763 333 3799999999999 99999999886
Q ss_pred cccc--ccc-CCcc-cccccCCCceEEEEcCcccCCcCCceEEEEEeC
Q 011057 249 GFIA--PFL-YPEL-EWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRN 292 (494)
Q Consensus 249 ~~~~--~~~-~~~~-~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~ 292 (494)
...- ++. .++. -..+-..++|.+++|+-|.+++|- .|+++-+.
T Consensus 181 ~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk 227 (367)
T PF03841_consen 181 LLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKK 227 (367)
T ss_dssp HHHHHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEEH
T ss_pred CCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCH
Confidence 5431 010 0111 112224589999999999998876 68776554
No 386
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.75 E-value=3.5e-08 Score=88.96 Aligned_cols=316 Identities=14% Similarity=0.089 Sum_probs=177.4
Q ss_pred HHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCe
Q 011057 98 NRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVE 177 (494)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~ 177 (494)
.++..-.-.+.|+..- ....++.-...+++.++++..|++. + ....|+......-+..+..-..|.+
T Consensus 60 ne~a~~~i~l~glhav---~nc~vvpl~tgmslslc~~s~r~kr-p---------kakyiiw~ridqks~~ksi~~agfe 126 (432)
T KOG3843|consen 60 NEFAKDAIHLAGLHAV---ANCFVVPLATGMSLSLCFLSLRHKR-P---------KAKYIIWLRIDQKSCFKSIIHAGFE 126 (432)
T ss_pred HHHHHHHHHHhhhhhh---hceeEEeccccccHHHHHHHHhhcC-C---------cccEEEEEecchHHHHHHHHhcCCC
Confidence 3444444556666531 0122222234455556666665531 1 1135788888887777777778999
Q ss_pred eEEEec--cCCccccCHHHHHHhhhhC-CeEEEEeeCCCCc---ccccCHHHHHHHHHHhhcccCCCceEEEeccccccc
Q 011057 178 LKEVKL--SEGYYVMDPVKAVEMVDEN-TICVAAILGSTLN---GEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFI 251 (494)
Q Consensus 178 v~~v~~--~~~~~~~d~~~L~~~i~~~-t~~vv~~~~~~~t---G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~ 251 (494)
++.|.- +.|....|++++++.+++. ..+|...+.+|.. -..|.+++|+.+|..| +++-+|..|||...
T Consensus 127 piiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~------diphivnnayglqs 200 (432)
T KOG3843|consen 127 PIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAH------DIPHIVNNAYGLQS 200 (432)
T ss_pred ceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHcc------Cchhhhccccccch
Confidence 777743 3344577899999988864 4556666666544 3458899999999999 99999999998742
Q ss_pred ccccCCcccccccCCCceEEEEcCcccCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHHHH
Q 011057 252 APFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ 331 (494)
Q Consensus 252 ~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~a 331 (494)
.. +.......-...++|.++-+.-|.++.|.|..++..-++.++++ ....|.+.. +....+-+...
T Consensus 201 ee-~i~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~---iak~ypgra----------sa~ps~dllit 266 (432)
T KOG3843|consen 201 EE-CIHKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQE---IAKMYPGRA----------SASPSLDLLIT 266 (432)
T ss_pred HH-HHHHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHH---HHHhCCCcc----------ccCccHHHHHH
Confidence 10 11111111134578999999999999998865543333323221 122344322 22333445566
Q ss_pred HHHhcHhHHHHHHHHHHHHHHHHHHHHh----hCCCeEEeecCC---CccEEEEEecCCCCCCHHHHHHHHHhcCcee--
Q 011057 332 LIRLGFEGYRNVMENCHENAMVLKEGLE----KTGRFNIVSKDE---GVPLVAFSLKDNKRHDEFEVAELLRRFGWIV-- 402 (494)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v-- 402 (494)
|..+|+.+|.+......++--+++..|. +++. .++..|. +..++.-.+++........+-..|..+|+.-
T Consensus 267 ll~~gqn~f~e~~~eqkemf~~l~~ki~~~ae~~~e-~l~~~p~n~is~amtl~ti~~~k~kavt~~gsilfak~isgar 345 (432)
T KOG3843|consen 267 LLSLGQNAFKELFGEQKEMFLKLRNKIIKFAEAIGE-CLLETPENEISLAMTLKTIDEAKDKAVTLFGSILFAKGISGAR 345 (432)
T ss_pred HHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhcCCCchhhhhhhhccCChHHhhHHHHHHHHHHhccccCce
Confidence 7777888877766666665555555553 3442 2222221 2333333332221111234556677777642
Q ss_pred --eccccCCCCCCceE--------------EEEEeccCCChHHHHHHHHHHHHHHHHHhcC
Q 011057 403 --PAYTMPADAQHITV--------------LRVVIREDFSRTLAERLVLDITKVLHELDSL 447 (494)
Q Consensus 403 --~~~~~~~~~~~~~~--------------lRvs~~~~~t~~~id~~i~~l~~~~~~l~~~ 447 (494)
+.....++..|..+ +-++.....+..|+|.|+..|..++..+++.
T Consensus 346 vv~~~q~kttieg~ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~a~~~ke 406 (432)
T KOG3843|consen 346 VVPLGQMKTTIEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCLAAFRKE 406 (432)
T ss_pred EeeccccceeeeceEEeccccccCcCchhHhhHHHhcCCcHhHHHHHHHHHHHHHHHHHHH
Confidence 22222222233322 2222333456678888888888877766543
No 387
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.67 E-value=5.9e-06 Score=83.55 Aligned_cols=344 Identities=14% Similarity=0.124 Sum_probs=185.2
Q ss_pred CCCCCHHHHHHHHHHhhhhcC--CCCCcccccccCCChHHHHHHHHHHhcc-cC-CCCCCC-----hhhHHHHHHHHHHH
Q 011057 34 ENSIPKEAAYQIINDELMLDG--NPRLNLASFVTTWMEPECDKLMMAAINK-NY-VDMDEY-----PVTTELQNRCVNII 104 (494)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~-~~~~~~-----~~~~~le~~~~~~l 104 (494)
+.+..+.+.++++.++...+. ..++.++.|.+ ..++.+..- .+++ .| ..|..| ++-.+-.-....++
T Consensus 97 ~~~~~E~eml~~l~~ia~kNk~~ksfIGmGYyn~-~vP~~I~RN---ilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi 172 (1001)
T KOG2040|consen 97 DKPLCESEMLQHLEDIASKNKIWKSFIGMGYYNT-HVPAVILRN---ILENPGWYTQYTPYQAEISQGRLESLLNYQTMI 172 (1001)
T ss_pred CCCcCHHHHHHHHHHHHhhhhHHHHhhccccccc-cCcHHHHHH---hhhCCcceeccCCCchhhhhhhHHHHhhhHHhh
Confidence 456788899999888765432 22233443333 334433322 2222 11 123333 33333333456789
Q ss_pred HHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHH----cCCeeEE
Q 011057 105 ARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARY----FEVELKE 180 (494)
Q Consensus 105 a~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~----~G~~v~~ 180 (494)
+++.|++-.+ ....--||.|-...+++.+... +.+++++...|+-....++. +|+++..
T Consensus 173 ~dlTGL~~aN-----ASLLDEgTAaaEAm~l~~~~~k------------rkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~ 235 (1001)
T KOG2040|consen 173 TDLTGLPMAN-----ASLLDEGTAAAEAMALCNRINK------------RKKFVVDSNCHPQTLSVVKTRAKGFGIKVVV 235 (1001)
T ss_pred hhccCCcccc-----hhhhccchhHHHHHHHHHhhcc------------cceEEecCCCCcchhhhhhccccccceeEEe
Confidence 9999998632 2222223333222222222210 13588999999855554433 2333222
Q ss_pred EeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCccc
Q 011057 181 VKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELE 260 (494)
Q Consensus 181 v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~ 260 (494)
. |+++... ..++...+.+..|.+. |.+.|..++.+.++.. +..+++-.- ...+-.+.|...
T Consensus 236 ~---------~~~~~~~-s~~~v~gvlvQYP~t~-G~i~d~~el~~~a~~~------~s~vv~atD--LLaLtiLrpPge 296 (1001)
T KOG2040|consen 236 S---------DIKEADY-SSKDVSGVLVQYPDTE-GSVLDFDELVELAHAN------GSLVVMATD--LLALTILRPPGE 296 (1001)
T ss_pred c---------CHHHhhc-cccceeEEEEEcCCCC-CcccCHHHHHHHhhcc------CceEEEeeh--hhHHHccCChhh
Confidence 2 2222111 1234567778888776 9999999999999998 766543211 111122333322
Q ss_pred ccccCCCceEEEEcCcccCCcCCce-----EEEEEeCCCCccccccc-----ccCCCCCCC-------CCccc---ccCc
Q 011057 261 WDFRLPLVKSINVSGHKYGLVYAGI-----GWVIWRNKEDLPEELIF-----HINYLGADQ-------PTFTL---NFSK 320 (494)
Q Consensus 261 ~~~~~~~~D~~~~~~hK~l~~p~g~-----G~~~~~~~~~~~~~~~~-----~~~y~~~~~-------~~~~~---~~s~ 320 (494)
.++|+...+++.++ .|.|- |++.+++. +.+.++- ..+-.+... +...+ ..|.
T Consensus 297 -----fGaDIavGSsQRFG-VPlGYGGPHAaFfAv~~~--l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATS 368 (1001)
T KOG2040|consen 297 -----FGADIAVGSSQRFG-VPLGYGGPHAAFFAVSES--LVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATS 368 (1001)
T ss_pred -----cCceeeeccccccC-ccccCCCchHHHHHHHHH--HHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccch
Confidence 38999999999986 44443 33333221 1011100 001111000 00000 0111
Q ss_pred ch---HHHHHHHHHH--HHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHH
Q 011057 321 GS---SQVIAQYYQL--IRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELL 395 (494)
Q Consensus 321 ~~---~~~~a~~~al--~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L 395 (494)
+. ...++-.+++ -+.|.+|++++.++.+..+.+|..+|+..+ -++...+ .+-.+-+++.. +.+++.++.
T Consensus 369 NICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~ag-hel~~k~-fFDTLkI~~~~----s~~~~l~rA 442 (1001)
T KOG2040|consen 369 NICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAG-HELQHKP-FFDTLKIRCGC----SAEEVLDRA 442 (1001)
T ss_pred hhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcc-hhhcccc-ccceEEEEecC----cHHHHHHHH
Confidence 11 1112222222 356999999999999999999999999887 6777664 44555566533 577888888
Q ss_pred HhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 396 RRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 396 ~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
.+++|-++.+ ....+-+++-+..+..|+|.++..+.
T Consensus 443 ~~~~iNlr~~-------ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 443 AKRQINLRLV-------EDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred HhhcCceEEe-------ecCceEEeecccccHHHHHHHHHHHc
Confidence 8888765432 22346678887778877776666554
No 388
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.41 E-value=0.00026 Score=65.97 Aligned_cols=300 Identities=12% Similarity=0.066 Sum_probs=164.5
Q ss_pred hCCCCCCC--CCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCC-eeEEEec-
Q 011057 108 FNAPLEDS--ETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEV-ELKEVKL- 183 (494)
Q Consensus 108 ~g~~~~~~--~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~-~v~~v~~- 183 (494)
+|.+.... +...++-+.+||.|+..+...+.. +.+ +..|++|.+++..-...++-.|. .+...+.
T Consensus 88 lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~-~~~----------~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yW 156 (410)
T KOG1412|consen 88 LGADSPAIKEDRVFGVQSLSGTGALRIAADFLAT-FYN----------KNTVYVSNPTWENHHAIFEKAGFTTVATYPYW 156 (410)
T ss_pred cCCCchhhhhccccceeeccccchhhhhHHHHHH-hcc----------cceeEecCCchhHHHHHHHHcCCceeeeeeee
Confidence 56654321 345678888999999877665533 222 24699999999888888888884 4555554
Q ss_pred cCCccccCHHHHHHhhhhCCe--EEEE-eeCCCCcccc---cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCC
Q 011057 184 SEGYYVMDPVKAVEMVDENTI--CVAA-ILGSTLNGEF---EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYP 257 (494)
Q Consensus 184 ~~~~~~~d~~~L~~~i~~~t~--~vv~-~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~ 257 (494)
+.++-.+|++.+...|+..|. .+++ ....||||.- +.+.+|+++.++. +.+.+.|-||-|++. ..+
T Consensus 157 d~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k------~lf~fFDiAYQGfAS--GD~ 228 (410)
T KOG1412|consen 157 DAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSK------NLFPFFDIAYQGFAS--GDL 228 (410)
T ss_pred cCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhc------Cceeeeehhhccccc--CCc
Confidence 223357999999988876542 2222 3457899864 3467788888888 899999999977653 111
Q ss_pred cc-cccc---cCCCc-eEEEEcCcccC-CcCCceEE--EEEeCCCCcccccccccCCCCCCCCCcccccCcchHHHHHHH
Q 011057 258 EL-EWDF---RLPLV-KSINVSGHKYG-LVYAGIGW--VIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQY 329 (494)
Q Consensus 258 ~~-~~~~---~~~~~-D~~~~~~hK~l-~~p~g~G~--~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~ 329 (494)
.. .|.+ -..+. -+++-|+.|.+ +-..++|- ++++++..+........-..........-.|.|-...++..-
T Consensus 229 ~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP 308 (410)
T KOG1412|consen 229 DADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTP 308 (410)
T ss_pred cccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCH
Confidence 11 1111 01233 34455666754 22334443 344554433221110000001100000001122111111111
Q ss_pred HHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC--C-eEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccc
Q 011057 330 YQLIRLGFEGYRNVMENCHENAMVLKEGLEKTG--R-FNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYT 406 (494)
Q Consensus 330 ~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~--~-~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~ 406 (494)
+ ++..-...++.+..++.+++..|++.|.+++ | +.-+.. +.++++|. +++. .-++.|.++..+ |.
T Consensus 309 ~-lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~--QiGMFSyT-----GLtp-~qV~~li~~h~v---yL 376 (410)
T KOG1412|consen 309 E-LREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQ--QIGMFSYT-----GLTP-AQVDHLIENHKV---YL 376 (410)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHh--hccceeec-----CCCH-HHHHHHHHhceE---EE
Confidence 1 1111123456777888889999999998875 1 111111 56676665 3455 445566655443 22
Q ss_pred cCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 407 MPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 407 ~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
.+ . =|+++..- +...+|....+|.+.+..+..
T Consensus 377 l~---~----GRInisGL-N~~NveyVAkAIde~Vr~~~~ 408 (410)
T KOG1412|consen 377 LS---D----GRINISGL-NMKNVEYVAKAIDETVRAIKS 408 (410)
T ss_pred ec---C----CcEeeecc-ccccHHHHHHHHHHHHHhhcc
Confidence 22 1 26676654 445688888888887766654
No 389
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=98.38 E-value=0.00011 Score=67.52 Aligned_cols=342 Identities=15% Similarity=0.073 Sum_probs=192.7
Q ss_pred CcccccccCCChHHHHHHHHHHhcccCCCC------CCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHH
Q 011057 58 LNLASFVTTWMEPECDKLMMAAINKNYVDM------DEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIM 131 (494)
Q Consensus 58 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~------~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~ 131 (494)
.||+.+...-+++.+.++-.+.++-+..+. ..+.....+.+.....+.+|++.|++ ..++|.-||...-+
T Consensus 9 vnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn----~~vlf~QGGGt~qF 84 (370)
T KOG2790|consen 9 VNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDN----YKVLFLQGGGTGQF 84 (370)
T ss_pred eecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCc----eeEEEEeCCCcccc
Confidence 456665444456667777777777654332 23446778888899999999999974 55777776544444
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEe-ccCCc--cccCHHHHHHhhhhCCeEEEE
Q 011057 132 LAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVK-LSEGY--YVMDPVKAVEMVDENTICVAA 208 (494)
Q Consensus 132 ~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~-~~~~~--~~~d~~~L~~~i~~~t~~vv~ 208 (494)
.++..-.--. +.|. .-+.|+..+=+--+..++-+ +|.....++ ..+-. -..|.+.++. +++...|..
T Consensus 85 aAv~lNL~gl-----K~g~--~AdYiVTGsWS~KA~~EAkk-~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyy 154 (370)
T KOG2790|consen 85 AAVPLNLIGL-----KHGR--CADYVVTGSWSAKAAEEAKK-YGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASYVYY 154 (370)
T ss_pred cccchhhhcc-----ccCC--ccceEEeccccHHHHHHHHh-hCCceEEeccccccccCcCCChhhccc--CCCccEEEE
Confidence 3322111100 0111 12355555444445555544 454433332 22211 1234443332 344568888
Q ss_pred eeCCCCcccccC-HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccccCCCceEEEEcCcccCCcCCceEE
Q 011057 209 ILGSTLNGEFED-VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGW 287 (494)
Q Consensus 209 ~~~~~~tG~~~~-l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~G~ 287 (494)
|...|..|.-.+ +. +-.-+ +..++.|-..- | +.. +.|+ ...+++....+|.. +|.|.-+
T Consensus 155 CaNETVHGVEf~~~P----~~~~~------~~vlVaDmSSn-f----lSr--pvDv--sk~gvi~aGAQKN~-G~aG~Tv 214 (370)
T KOG2790|consen 155 CANETVHGVEFDFIP----VNDPK------GAVLVADMSSN-F----LSR--PVDV--SKFGVIFAGAQKNV-GPAGVTV 214 (370)
T ss_pred ecCceeeceecCCCC----CCCCC------CceEEEecccc-h----hcC--Cccc--hhcceEEecccccc-CccccEE
Confidence 988888888633 22 01112 77888885443 2 211 1133 35667778899986 6788888
Q ss_pred EEEeCCCCcccccccccCCCCCC--CCCcccccCcchHHHHHHHHHHHHhcH-hHHHHHHHHHHHHHHHHHHHHhhCCCe
Q 011057 288 VIWRNKEDLPEELIFHINYLGAD--QPTFTLNFSKGSSQVIAQYYQLIRLGF-EGYRNVMENCHENAMVLKEGLEKTGRF 364 (494)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~y~~~~--~~~~~~~~s~~~~~~~a~~~al~~l~~-~g~~~~~~~~~~~a~~l~~~L~~~~~~ 364 (494)
+++|+. .+.......+..+... .....+..|+|.+.+..+-..++.+.+ .|++.+.+...+.++.+.+.|.+..+|
T Consensus 215 vivr~d-llg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gf 293 (370)
T KOG2790|consen 215 VIVRKD-LLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGF 293 (370)
T ss_pred EEEehh-hhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 888875 3322222222222111 112233355555555555556665544 467777788888999999999998766
Q ss_pred EEe-ecCC--CccEEEEEecCCCCCCHHHHHHHHHhcCcee-eccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHH
Q 011057 365 NIV-SKDE--GVPLVAFSLKDNKRHDEFEVAELLRRFGWIV-PAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 365 ~~~-~~~~--~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v-~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
-.. .++. +-.-|+|++.+ ++++. ++.+...+++.+- -+ .+..+.+|.|+-+..+-+++++|++-+++.
T Consensus 294 y~cpVe~~~RS~MNV~Fri~~-d~Le~-eFLkeA~~~~mv~LKG------hRSVGGiRASlYNAisv~~~q~L~~~m~~F 365 (370)
T KOG2790|consen 294 YRCPVEPSVRSRMNVPFRIEK-DELEA-EFLKEAAKEHMVQLKG------HRSVGGIRASLYNAISVEEVQKLAAFMKEF 365 (370)
T ss_pred EEcccchhhhhhcccceeecc-hHHHH-HHHHHHHHhhhhcccc------ccccccchhhhhccccHHHHHHHHHHHHHH
Confidence 533 2222 34457899864 33443 4444444444431 11 122344999998888999988877766665
Q ss_pred HH
Q 011057 441 LH 442 (494)
Q Consensus 441 ~~ 442 (494)
.+
T Consensus 366 ~k 367 (370)
T KOG2790|consen 366 QK 367 (370)
T ss_pred HH
Confidence 43
No 390
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=98.34 E-value=6.5e-06 Score=80.65 Aligned_cols=196 Identities=12% Similarity=0.122 Sum_probs=133.2
Q ss_pred CCeEEeCCCcchH-HHHHHHHcCCeeEEEec--cCC----ccccCHHHHHHhhhhC------CeEEEEeeCCCCcccccC
Q 011057 154 KPNIVTGANVQVC-WEKFARYFEVELKEVKL--SEG----YYVMDPVKAVEMVDEN------TICVAAILGSTLNGEFED 220 (494)
Q Consensus 154 ~~~vi~~~~~h~s-~~~~~~~~G~~v~~v~~--~~~----~~~~d~~~L~~~i~~~------t~~vv~~~~~~~tG~~~~ 220 (494)
.+.++++...|.- ...+|+.+|+....|.. +.+ .++||.-.+++.|+++ +.+++...|.+-.|..|.
T Consensus 231 aPt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDm 310 (838)
T KOG0630|consen 231 APTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDM 310 (838)
T ss_pred CceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHH
Confidence 4689999999974 45578889987544432 211 2589999999998763 556777789999999999
Q ss_pred HHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccccc--cCCCceEEEEcCcccCCcCCceEEEEEeCCCCccc
Q 011057 221 VKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF--RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPE 298 (494)
Q Consensus 221 l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~--~~~~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~ 298 (494)
+-+|.++|++++ ..|+|.-| |+...+ .+.+...-. -.+.+|+++++.--|++.|.-- ++...++..
T Consensus 311 i~kildi~eaha-----kfWLHasG-haiAAL--t~aepnnil~HV~eqldSMal~ialWLGiPSaP-iV~LHRPle--- 378 (838)
T KOG0630|consen 311 ILKILDICEAHA-----KFWLHASG-HAIAAL--TCAEPNNILGHVEEQLDSMALNIALWLGIPSAP-IVLLHRPLE--- 378 (838)
T ss_pred HHHHHHHHHHhh-----heeEeecc-chhhhe--eecCcccchhHHHHHHhhccchhHHHhCCCCCc-eEEeecccc---
Confidence 999999999994 49999876 222222 222111111 1246899999999999877533 333322210
Q ss_pred ccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCCCeEEeec
Q 011057 299 ELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSK 369 (494)
Q Consensus 299 ~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 369 (494)
.|..+....-.+ . +--...+.+|.++.++|...+..+++....+.+.|.+.+.+.++++++.-
T Consensus 379 ------g~aaSafesdpi-~-rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig~ 441 (838)
T KOG0630|consen 379 ------GSAASAFESDPI-L-REKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIGH 441 (838)
T ss_pred ------cccchhcccChH-H-HHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEecc
Confidence 111111000000 0 11245688999999999999999999999999999999999998988753
No 391
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.27 E-value=4.3e-05 Score=70.73 Aligned_cols=151 Identities=17% Similarity=0.135 Sum_probs=103.8
Q ss_pred HHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeE-EeCCCcchHHHHHH-------
Q 011057 100 CVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNI-VTGANVQVCWEKFA------- 171 (494)
Q Consensus 100 ~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~v-i~~~~~h~s~~~~~------- 171 (494)
+.+-.|+.||.+... .-.-..+||.|+..++...+++ .+++ .+...-+-.+.+..
T Consensus 70 Le~vyA~vf~aE~a~----VRpq~isGTHAI~~aLfg~LRp-------------gDell~i~G~PYDTLeevIG~rg~~~ 132 (416)
T COG4100 70 LERVYAQVFGAEAAL----VRPQIISGTHAIACALFGILRP-------------GDELLYITGSPYDTLEEVIGLRGEGQ 132 (416)
T ss_pred HHHHHHHHhccccce----eeeeeecchhHHHHHHHhccCC-------------CCeEEEecCCcchhHHHHhccCCCCc
Confidence 445589999998621 1223447889988777766542 1333 33333333444433
Q ss_pred ---HHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEee----CCCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 011057 172 ---RYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAIL----GSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVD 244 (494)
Q Consensus 172 ---~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~----~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (494)
+-.|+..+.+|+..+ +.+|++.+..+++++|++|.+.- ..-|+-.+++++++.++.|+.++ ++++.||
T Consensus 133 gSL~dfgi~Y~~v~Lt~~-gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inp----n~ivFVD 207 (416)
T COG4100 133 GSLKDFGIKYKAVPLTAD-GKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINP----NVIVFVD 207 (416)
T ss_pred ccHHHhCcceeecccccC-CcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCC----CEEEEEe
Confidence 234667888999865 79999999999999999887753 23355667888888888888754 9999999
Q ss_pred cccccccccccCCcccccccCCCceEEEEcCcccC
Q 011057 245 AASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYG 279 (494)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l 279 (494)
.+||.|+-. ..|. + -++|.+..|.-|.-
T Consensus 208 NCYGEFvE~-~EPt---~---vGaDliAGSLIKNp 235 (416)
T COG4100 208 NCYGEFVEE-KEPT---H---VGADLIAGSLIKNP 235 (416)
T ss_pred ccchhhhhc-cCcc---c---cchhhhccceeeCC
Confidence 999998631 1111 1 27999999988864
No 392
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.26 E-value=4.3e-05 Score=70.62 Aligned_cols=289 Identities=13% Similarity=0.099 Sum_probs=153.7
Q ss_pred ceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHc------CCe------eEEEeccCC
Q 011057 119 VGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYF------EVE------LKEVKLSEG 186 (494)
Q Consensus 119 ~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~------G~~------v~~v~~~~~ 186 (494)
.++|+++|+|||-++++.+|+... .++.|.+....|.-+...++.. |.. |...|+.+-
T Consensus 104 vc~F~NSGSEANDLALRLAR~ftk----------hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDv 173 (452)
T KOG1403|consen 104 VCFFVNSGSEANDLALRLARNFTK----------HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDV 173 (452)
T ss_pred EEEEecCCchhhHHHHHHHHhhcc----------cCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccc
Confidence 489999999999999999987521 2356666666665333322221 111 233343210
Q ss_pred ---cc--------c---cCHHHHHHhhhh---C---CeEEEEeeCCCCcccccC----HHHHHHHHHHhhcccCCCceEE
Q 011057 187 ---YY--------V---MDPVKAVEMVDE---N---TICVAAILGSTLNGEFED----VKLLNDLLAEKNKETGWDTPIH 242 (494)
Q Consensus 187 ---~~--------~---~d~~~L~~~i~~---~---t~~vv~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~ 242 (494)
.+ . .-.+.+++.+++ + ..+.+.-+-.+.-|.+.| ++.+++..+.+ |..++
T Consensus 174 yrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~a------GGv~I 247 (452)
T KOG1403|consen 174 YRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSA------GGVCI 247 (452)
T ss_pred cccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcC------CCeEE
Confidence 01 1 112334444432 1 122333333444466654 46677777777 99999
Q ss_pred EecccccccccccCCcccccccCC--CceEEEEcCcccCCcCCceEEEEEeCCCCccccccc-ccCCCCCCCCCcccccC
Q 011057 243 VDAASGGFIAPFLYPELEWDFRLP--LVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIF-HINYLGADQPTFTLNFS 319 (494)
Q Consensus 243 vD~a~~~~~~~~~~~~~~~~~~~~--~~D~~~~~~hK~l~~p~g~G~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~s 319 (494)
.|+++-+|-- . ...-|.++.- -.|.++ ..|-++.+..++.+....+ +.+.+.. ...|+.. + |-
T Consensus 248 aDEVQvGFGR--v-G~hyWafq~y~fiPDIVt--mgKpmGNGhPVa~Vattke--IA~Af~atgv~YFNT------y-GG 313 (452)
T KOG1403|consen 248 ADEVQVGFGR--V-GSHYWAFQTYNFIPDIVT--MGKPMGNGHPVAAVATTKE--IAQAFHATGVEYFNT------Y-GG 313 (452)
T ss_pred eehhhhcccc--c-chhhhhhhhhccccchhe--ecccCCCCCeeeEEeccHH--HHHHhccccceehhc------c-CC
Confidence 9999976521 1 1112233211 235444 3355544445565554432 2222221 2334322 1 11
Q ss_pred cchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEeecCCCccE-EEEEecCC------CCCCHHHH
Q 011057 320 KGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTG-RFNIVSKDEGVPL-VAFSLKDN------KRHDEFEV 391 (494)
Q Consensus 320 ~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~~~~-v~f~~~~~------~~~~~~~l 391 (494)
.| .+-+...+.++.+..+ ...++..+.-++|.+.|+.+. ..+++.+-...++ +.+.+-.. +...+..+
T Consensus 314 nP-VsCAv~laVm~v~e~E---~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~ 389 (452)
T KOG1403|consen 314 NP-VSCAVGLAVMRVCEDE---NLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWV 389 (452)
T ss_pred Cc-hhHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHH
Confidence 21 2333344455555544 456667777778888877654 2667766433333 33443211 11124456
Q ss_pred HHHHHhcC-ceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 392 AELLRRFG-WIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 392 ~~~L~~~G-i~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
..+|.+.. +.+++ +..+.+++.+----.+++++.+.++..|++++-.+++
T Consensus 390 v~rlke~y~VLlsa-----DGPh~NilKiKPPmCFneena~e~v~~ld~iLT~mee 440 (452)
T KOG1403|consen 390 VNRLKELYRVLLSA-----DGPHRNILKIKPPMCFNEENADEFVLGLDEILTVMEE 440 (452)
T ss_pred HHHHHHhhhEEEec-----CCCCCceeecCCCcccChhhHHHHHHHHHHHHHHHHH
Confidence 67777654 66543 2345677776655567889999999999999876654
No 393
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.26 E-value=4.4e-05 Score=72.59 Aligned_cols=296 Identities=13% Similarity=0.138 Sum_probs=144.3
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCC-CeEEeCCCcchHHHHH
Q 011057 92 VTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDK-PNIVTGANVQVCWEKF 170 (494)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~-~~vi~~~~~h~s~~~~ 170 (494)
-..+|++.++ .|-++.|-... +...+++.+|+|+.++.++.++.... ..... ..|+.+.+.++++...
T Consensus 44 ~s~eL~~~Ir-~LH~~VGNAvt--~gr~IV~GtGsTQL~~AalyALSp~~--------~~~~~p~~VVa~aPYY~~Y~~q 112 (363)
T PF04864_consen 44 ISPELERQIR-RLHRVVGNAVT--DGRYIVFGTGSTQLFNAALYALSPNA--------SPSSSPASVVAAAPYYSSYPEQ 112 (363)
T ss_dssp S-HHHHHHHH-HHHHHH-SB----TTSEEEEECHHHHHHHHHHHHHCHHT---------TTSSSEEEEE-SS--CHHHHH
T ss_pred ccHHHHHHHH-HHHHHhccccc--cCcEEEEcCCHHHHHHHHHHhcCCCC--------CCCCCCceeEecCCCccchHHH
Confidence 3455555433 35555554332 23578999999999987777764320 01122 3789999999999887
Q ss_pred HHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccc
Q 011057 171 ARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGF 250 (494)
Q Consensus 171 ~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~ 250 (494)
...+.-..-...-|...+. + .=+..+.+=++|+||||.|.+-. . +++.. +..++.|-||-+
T Consensus 113 t~~f~s~~y~w~Gda~~~~-~------~~~~~~~IElVTSPNNPDG~lr~--~---V~~g~------~~k~I~D~AYYW- 173 (363)
T PF04864_consen 113 TDFFDSRLYKWAGDASNFK-N------SDNPSPYIELVTSPNNPDGQLRE--A---VLNGS------SGKVIHDLAYYW- 173 (363)
T ss_dssp CCCT-BTTEEEEEECCCGT-T-------S-CCGEEEEEESS-TTT-----------SSTTT------EEEEEEE-TT-S-
T ss_pred HHhccccCccccccHHhhc-c------CCCCCCeEEEEeCCCCCcccccc--h---hcCCC------Ccceeeeeeeec-
Confidence 7666544444443332231 1 00123456678999999998831 1 11222 667899999987
Q ss_pred cccccCCcccccccCCCceEEEEcCcc-cCCcCCceEEEEEeCCCCcccccccccCCCCCCCCCcccccCcch-HHHHHH
Q 011057 251 IAPFLYPELEWDFRLPLVKSINVSGHK-YGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGS-SQVIAQ 328 (494)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~D~~~~~~hK-~l~~p~g~G~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~s~~~-~~~~a~ 328 (494)
|...|.... ..=|.+-++..| .+-++.+.||.+++++....... .|+.... +.-++.. ..++.+
T Consensus 174 --PhyTpI~~~----aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~----~y~~lnT----iGvS~dsQLRa~ki 239 (363)
T PF04864_consen 174 --PHYTPITAP----ADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMT----KYMELNT----IGVSRDSQLRALKI 239 (363)
T ss_dssp --TTTS---S-----B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHH----HHHHHHC----SS--HHHHHHHHHH
T ss_pred --ccccccCCC----CCCceEEEEEecccCccccccceeeecCHHHHHHHH----HHHHHhc----ccCcHHHHHHHHHH
Confidence 333332110 134778888888 46677888999999875432221 1221100 0011110 112222
Q ss_pred HHHH-HHhcHh-----HHHHHHHHHHHHHHHHHHHHhhCCCeEEeecCC------------CccEEEEEecCCCCCCHHH
Q 011057 329 YYQL-IRLGFE-----GYRNVMENCHENAMVLKEGLEKTGRFNIVSKDE------------GVPLVAFSLKDNKRHDEFE 390 (494)
Q Consensus 329 ~~al-~~l~~~-----g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~------------~~~~v~f~~~~~~~~~~~~ 390 (494)
..++ ...+.+ -+.--.+.+.++...|++.+.+.+.|.+-.-++ +..+..++...... .+
T Consensus 240 Lk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed---~D 316 (363)
T PF04864_consen 240 LKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREED---ED 316 (363)
T ss_dssp HHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGG---SS
T ss_pred HHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCccc---cc
Confidence 2222 112211 122233445566678888888877676543221 12244455543222 34
Q ss_pred HHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 391 VAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 391 l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
-.+.|++.||+-++....+ .+..++|+|+.- +.++.|.|++.|.
T Consensus 317 C~~~l~~~~I~tr~G~~fg--a~~ryVRlSml~--~~d~Fd~l~~rL~ 360 (363)
T PF04864_consen 317 CYAVLREAKIITRSGVLFG--ADSRYVRLSMLK--RDDDFDQLLERLS 360 (363)
T ss_dssp HHHHHHCTTEEEEEGGGGT--S-TTEEEEESSS---HHHHHHHHHHHH
T ss_pred HHHHHHhCCcccCCCCccC--CCCCeEEEeccC--CHHHHHHHHHHHH
Confidence 5566778888866544332 345689999763 5666666665554
No 394
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.68 E-value=0.0018 Score=61.38 Aligned_cols=345 Identities=16% Similarity=0.082 Sum_probs=176.1
Q ss_pred hhhhcCCCC-Ccccccc--cCCC----hHHHHHHHHHHhcccCC-CCCCChhhHHHHHHHHHHHHHH-hCCCCCCC--CC
Q 011057 49 ELMLDGNPR-LNLASFV--TTWM----EPECDKLMMAAINKNYV-DMDEYPVTTELQNRCVNIIARL-FNAPLEDS--ET 117 (494)
Q Consensus 49 ~~~~~~~~~-~~~~~~~--~~~~----~p~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l-~g~~~~~~--~~ 117 (494)
.+..+.+|. +|++.+. +... .|.++++-.+.++.+.. .|-.--+..++.+. -++| +|-..+.. +.
T Consensus 45 Afk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~----sakLa~G~~s~~ik~~R 120 (427)
T KOG1411|consen 45 AFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKL----SAKLALGDNSPVIKEKR 120 (427)
T ss_pred HHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHH----HHHHhhcCCchhhhccc
Confidence 334455554 5555433 3322 24555554444432221 12222244454433 3333 45543221 22
Q ss_pred cceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEec-cCCccccCHHHHH
Q 011057 118 AVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKL-SEGYYVMDPVKAV 196 (494)
Q Consensus 118 ~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~L~ 196 (494)
...+-|-+||.|+-.+...+.+.+. ...|++|.+++.-..+.-...|+.+..+.. ++.+..+|.+-+.
T Consensus 121 i~tvQ~lSGTGaLriga~Fl~~f~~-----------~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~l 189 (427)
T KOG1411|consen 121 IVTVQTLSGTGALRVGAEFLARFYP-----------SRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGML 189 (427)
T ss_pred eeEEEeccCcchhhHHHHHHHhhcc-----------ccceeecCCcccccCccccccCcceeeeeeccccccccchHHHH
Confidence 3345556888888776655544321 247999999988777777788998877765 3445678988777
Q ss_pred HhhhhCC---eEEEEeeCCCCcccc---cCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCc-ccc-cc-cCCC
Q 011057 197 EMVDENT---ICVAAILGSTLNGEF---EDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPE-LEW-DF-RLPL 267 (494)
Q Consensus 197 ~~i~~~t---~~vv~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~-~~-~~~~ 267 (494)
+.+.+.+ .++.-....||||.- +.+++|.++.++. +.+-+.|-||-+|...-...+ ... .| ...+
T Consensus 190 edl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k------~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~ 263 (427)
T KOG1411|consen 190 EDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEK------NLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGH 263 (427)
T ss_pred HHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc------cccchhhhhhcccccCCchhhHHHHHHHHHcCC
Confidence 7666532 334445678899865 4577888888888 899999999987653211110 000 11 1112
Q ss_pred ceEEEEcCcccCCc-CCceEEE--EEeCCCCcccccc------cccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHh
Q 011057 268 VKSINVSGHKYGLV-YAGIGWV--IWRNKEDLPEELI------FHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFE 338 (494)
Q Consensus 268 ~D~~~~~~hK~l~~-p~g~G~~--~~~~~~~~~~~~~------~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~ 338 (494)
--.++-|.-|.++- +-++|.+ ++.+.+ ...... .++.|.. ..+.|.+-...++.-.. |...-..
T Consensus 264 ~~~laQSyAKNMGLYgERvGa~svvc~~ad-~A~rV~SQlk~liRpmYSn-----PP~hGArIv~~Il~d~~-l~~~W~~ 336 (427)
T KOG1411|consen 264 EILLAQSYAKNMGLYGERVGALSVVCKDAD-EAKRVESQLKILIRPMYSN-----PPLHGARIVATILSDPD-LKNQWLG 336 (427)
T ss_pred ceEeehhhhhhcchhhhccceeEEEecCHH-HHHHHHHHHHHHhcccccC-----CCccchhhhhhccCChH-HHHHHHH
Confidence 23344455565422 2234443 333322 111111 1122221 11223332222211110 1000012
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCe---EEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCce
Q 011057 339 GYRNVMENCHENAMVLKEGLEKTGRF---NIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHIT 415 (494)
Q Consensus 339 g~~~~~~~~~~~a~~l~~~L~~~~~~---~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~ 415 (494)
..+.+.++++.++..|.+.|+..+.- .-+.. +.+++||.- ++.+ -++.|.++-.+ |... .
T Consensus 337 evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~--QIGMF~fTg-----l~pe-Qv~~l~ke~~i---YmT~---d--- 399 (427)
T KOG1411|consen 337 EVKGMADRIISMRQQLFDALEKEGSPGNWSHITK--QIGMFCFTG-----LNPE-QVDWLTKEYHI---YLTK---D--- 399 (427)
T ss_pred HHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHH--hhheeeecC-----CCHH-HHHHHHhhhee---eecc---C---
Confidence 24567788889999999999887521 11222 567888773 4554 44555544332 2211 1
Q ss_pred EEEEEeccCCChHHHHHHHHHHHHH
Q 011057 416 VLRVVIREDFSRTLAERLVLDITKV 440 (494)
Q Consensus 416 ~lRvs~~~~~t~~~id~~i~~l~~~ 440 (494)
-|+|+..- +...++.|.++|..+
T Consensus 400 -GRiS~aG~-ss~nV~yLa~aih~v 422 (427)
T KOG1411|consen 400 -GRISMAGL-SSSNVPYLADAIHAV 422 (427)
T ss_pred -ceEeeccc-cccCCcccchhhHhH
Confidence 47887654 344466666555544
No 395
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.42 E-value=0.012 Score=56.11 Aligned_cols=188 Identities=15% Similarity=0.104 Sum_probs=102.1
Q ss_pred ccccCHHHHHHHHHHhhcccCCCceEEEecccccccccccCCcccc-cccC-CCceEEEEcCcccCCcCCceEEEEEeCC
Q 011057 216 GEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEW-DFRL-PLVKSINVSGHKYGLVYAGIGWVIWRNK 293 (494)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~-~~~D~~~~~~hK~l~~p~g~G~~~~~~~ 293 (494)
++-+=++.+.+++++| ++.++||+++-|+-. ...-..+ .+++ .-.|.+++| .|+.. .|++ -++
T Consensus 289 aSp~Ff~kLrdi~~Kh------~v~fivDEVQTGgGa--TGk~WaHehw~l~~PpD~vTFS-KK~q~----gGff--h~~ 353 (484)
T KOG1405|consen 289 ASPDFFRKLRDITKKH------GVAFIVDEVQTGGGA--TGKFWAHEHWNLDSPPDVVTFS-KKFQT----GGFF--HDE 353 (484)
T ss_pred CCHHHHHHHHHHHHhc------CeEEEeeeeecCCCc--cCceeeehhcCCCCCccceehh-hhhhc----Cccc--cCc
Confidence 4445589999999999 999999999955321 1111111 1122 247888754 56543 2333 233
Q ss_pred CCccc-ccccccCCCCCCCCCcccccCcchHHHHHHHHHHHHhcHhHHHHHHHHHHHHHHHHHHHHhhC----CCeEEee
Q 011057 294 EDLPE-ELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKT----GRFNIVS 368 (494)
Q Consensus 294 ~~~~~-~~~~~~~y~~~~~~~~~~~~s~~~~~~~a~~~al~~l~~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~ 368 (494)
...+. .......|++. +...+-+...++.+.+++ ..+.....-++|..+|.++ |+. +-.
T Consensus 354 ~frpn~pYrifNTWmGd------------P~k~lll~~vv~~I~~~~---Ll~n~~~vG~~l~~gL~~Lq~~~p~~-~~~ 417 (484)
T KOG1405|consen 354 EFRPNEPYRIFNTWMGD------------PSKNLLLEEVVQEIKRED---LLNNVAHVGKALLKGLLELQAKYPGK-INN 417 (484)
T ss_pred ccCCCchHHHhhhhcCC------------hHHHHHHHHHHHHHhHHH---HHHHHHHHHHHHHHHHHHHHHhCchh-hhc
Confidence 33221 11111223322 133444555556665554 3444555555666666543 421 111
Q ss_pred cCCCccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHH
Q 011057 369 KDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHE 443 (494)
Q Consensus 369 ~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~ 443 (494)
-..+..+++|.++.. .-.+.+...++-+|+.+.+. |...+|+--+--+.+...+-|++.++++++.
T Consensus 418 ~RGrGTF~a~d~ps~--~~Rdk~i~~~~~nGv~~GGC-------g~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 418 LRGRGTFIAWDCPSG--SIRDKLILIARLNGVNLGGC-------GDKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred ccccceEEEEeCCCh--HHHHHHHHHHHHcCceeccc-------ccceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 112567888888543 23567888889999986332 2334555444445666677777777776653
No 396
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=94.76 E-value=0.27 Score=42.45 Aligned_cols=63 Identities=10% Similarity=0.126 Sum_probs=48.4
Q ss_pred CCCChhhHHHHHHHHHHHHHHhC--CCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcc
Q 011057 87 MDEYPVTTELQNRCVNIIARLFN--APLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQ 164 (494)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g--~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h 164 (494)
|..+.+..++++.+.+++.+.+| .+.+ ...+++|+|+++++.+++.++.+. ++.|+++.+.|
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~---pd~Ivvt~Ga~~al~~l~~~l~dp-------------GD~VlVp~P~Y 151 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFD---ADMIVLSAGATAANEIIMFCIADP-------------GDAFLVPTPYY 151 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccc---hhheEEcCCHHHHHHHHHHHHcCC-------------CCEEEEeCCCC
Confidence 44556888999999999999988 3321 246999999999999888877442 36899998877
Q ss_pred h
Q 011057 165 V 165 (494)
Q Consensus 165 ~ 165 (494)
.
T Consensus 152 ~ 152 (153)
T PLN02994 152 A 152 (153)
T ss_pred C
Confidence 4
No 397
>PRK11633 cell division protein DedD; Provisional
Probab=62.64 E-value=18 Score=33.24 Aligned_cols=51 Identities=22% Similarity=0.318 Sum_probs=36.1
Q ss_pred CHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHH
Q 011057 387 DEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITK 439 (494)
Q Consensus 387 ~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~ 439 (494)
+...+.++|+..|+-. |+.+....+..+.||-++.+.++++.+.....|+.
T Consensus 162 ~A~~l~~kL~~~G~~A--y~~~~~~~~G~~tRV~VGP~~sk~~ae~~~~~Lk~ 212 (226)
T PRK11633 162 KVNEIVAKLRLSGYRV--YTVPSTPVQGKITRIYVGPDASKDKLKGSLGELKQ 212 (226)
T ss_pred HHHHHHHHHHHCCCee--EEEeeecCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 5778999999999975 44433323335789999999999877655554443
No 398
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=57.88 E-value=1.7e+02 Score=28.24 Aligned_cols=101 Identities=12% Similarity=0.008 Sum_probs=59.0
Q ss_pred eeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCc--ch--HHHHHHHHcCCeeEEEeccCCcc--ccCHH
Q 011057 120 GVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANV--QV--CWEKFARYFEVELKEVKLSEGYY--VMDPV 193 (494)
Q Consensus 120 ~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~--h~--s~~~~~~~~G~~v~~v~~~~~~~--~~d~~ 193 (494)
.++|.||.++|.+-..++.... .|.. .+.++-... +. ...-....+|++++.++...+ + ....+
T Consensus 66 TlvT~GgiQSNh~r~tAavA~~------lGl~---~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d-~~~~~~~~ 135 (323)
T COG2515 66 TLVTYGGIQSNHVRQTAAVAAK------LGLK---CVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTD-IGINASAE 135 (323)
T ss_pred EEEEecccchhHHHHHHHHHHh------cCCc---EEEEEeccccccccccchhhhhhcCceEEEecCCCC-hhhchhhH
Confidence 7899999999997666654432 2321 233332222 11 122334678999988876543 3 33446
Q ss_pred HHHHhhhhC--CeEEEEeeCCCCcccc---cCHHHHHHHHHH
Q 011057 194 KAVEMVDEN--TICVAAILGSTLNGEF---EDVKLLNDLLAE 230 (494)
Q Consensus 194 ~L~~~i~~~--t~~vv~~~~~~~tG~~---~~l~~I~~la~~ 230 (494)
.+.+.+.++ ...|+...+.++.|.. .-..||.+-+++
T Consensus 136 ~~~e~~~~~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~ 177 (323)
T COG2515 136 ELAEEVRKQGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQ 177 (323)
T ss_pred HHHHHHHhcCCCCcEeccCCcCccccccHHHHHHHHHHHHhh
Confidence 666666553 3456666677785554 555666666665
No 399
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=57.37 E-value=70 Score=25.70 Aligned_cols=73 Identities=16% Similarity=0.223 Sum_probs=47.2
Q ss_pred HHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh-CCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 011057 166 CWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVD 244 (494)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (494)
.+...++..|.++..++.+ .+.+++.+.+.+ ++.+|.++.. .+.......++++.+|+. .+++.+++=
T Consensus 19 ~la~~l~~~G~~v~~~d~~-----~~~~~l~~~~~~~~pd~V~iS~~--~~~~~~~~~~l~~~~k~~----~p~~~iv~G 87 (121)
T PF02310_consen 19 YLAAYLRKAGHEVDILDAN-----VPPEELVEALRAERPDVVGISVS--MTPNLPEAKRLARAIKER----NPNIPIVVG 87 (121)
T ss_dssp HHHHHHHHTTBEEEEEESS-----B-HHHHHHHHHHTTCSEEEEEES--SSTHHHHHHHHHHHHHTT----CTTSEEEEE
T ss_pred HHHHHHHHCCCeEEEECCC-----CCHHHHHHHHhcCCCcEEEEEcc--CcCcHHHHHHHHHHHHhc----CCCCEEEEE
Confidence 4555667779998888643 445777776654 5677766553 334445566677666655 338899988
Q ss_pred ccccc
Q 011057 245 AASGG 249 (494)
Q Consensus 245 ~a~~~ 249 (494)
|.+..
T Consensus 88 G~~~t 92 (121)
T PF02310_consen 88 GPHAT 92 (121)
T ss_dssp ESSSG
T ss_pred CCchh
Confidence 87754
No 400
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=56.93 E-value=21 Score=31.91 Aligned_cols=36 Identities=17% Similarity=0.067 Sum_probs=29.6
Q ss_pred CeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEe
Q 011057 203 TICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVD 244 (494)
Q Consensus 203 t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (494)
..+|+++.|++..|.++|++.-++++++. |+.+|.=
T Consensus 113 kvvILLTDG~n~~~~i~P~~aAa~lA~~~------gV~iytI 148 (191)
T cd01455 113 AIVIVLSDANLERYGIQPKKLADALAREP------NVNAFVI 148 (191)
T ss_pred cEEEEEeCCCcCCCCCChHHHHHHHHHhC------CCEEEEE
Confidence 35778899999999999988778999988 8877643
No 401
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=53.51 E-value=22 Score=30.90 Aligned_cols=50 Identities=22% Similarity=0.284 Sum_probs=39.1
Q ss_pred CHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccccc
Q 011057 191 DPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGG 249 (494)
Q Consensus 191 d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (494)
|..+++++++.+...+++-. |.+..++++.+.+++..+ .+++|||=..|.
T Consensus 12 ~~~~le~~les~~~~vflL~-----~~i~~ik~ivk~lK~~gK----~vfiHvDLv~Gl 61 (181)
T COG1954 12 DNKDLEKALESESQYVFLLT-----GHILNIKEIVKKLKNRGK----TVFIHVDLVEGL 61 (181)
T ss_pred hHHHHHHHhcCCCeEEEEEe-----chhhhHHHHHHHHHhCCc----EEEEEeHHhccc
Confidence 56788889988877666543 567789999999998833 689999988876
No 402
>KOG4392 consensus RNA polymerase, subunit L [Transcription]
Probab=50.75 E-value=39 Score=26.99 Aligned_cols=80 Identities=25% Similarity=0.368 Sum_probs=52.9
Q ss_pred ccEEEEEecCCCCCC-HHHHHH-HHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhcCccc
Q 011057 373 VPLVAFSLKDNKRHD-EFEVAE-LLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLPSK 450 (494)
Q Consensus 373 ~~~v~f~~~~~~~~~-~~~l~~-~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~~~~~ 450 (494)
-|-..|++...+ .. ..-+.. .|.+..+++.+|..|--......+||......++. +.+.+++..+..++..+..+
T Consensus 28 pNA~~fTiekED-HTLGNii~~qLl~D~~vLFagYkvpHPl~~~~~LRiqtt~d~~p~--~al~~a~~~l~~el~~l~~~ 104 (117)
T KOG4392|consen 28 PNAALFTIEKED-HTLGNIIKSQLLKDPRVLFAGYKVPHPLEHKIILRVQTTEDCSPA--DALTNAITDLIEELSLLENR 104 (117)
T ss_pred CceEEEEEeccc-chHHHHHHHHHccCccceEeeecCCCcccccEEEEEecCCCCCHH--HHHHHHHHHHHHHHHHHHHH
Confidence 345566664321 12 223333 34566788777776655667788999998888774 56788888888888887777
Q ss_pred ccccc
Q 011057 451 VLVPA 455 (494)
Q Consensus 451 ~~~~~ 455 (494)
+.+..
T Consensus 105 f~~~~ 109 (117)
T KOG4392|consen 105 FKAEA 109 (117)
T ss_pred HHHHH
Confidence 64433
No 403
>cd06927 RNAP_L L subunit of Archaeal RNA polymerase. The archaeal L subunit of RNA polymerase (RNAP) is involved in the assembly of RNAP subunits. RNAP is a large multi-subunit complex responsible for the synthesis of RNA. It is the principal enzyme of the transcription process, and is a final target in many regulatory pathways that control gene expression in all living cells. A single distinct RNAP complex is found in archaea, which may be responsible for the synthesis of all RNAs. The archaeal RNAP harbors homologues of all eukaryotic RNAP II subunits with two exceptions (RPB8 and RPB9). The 12 archaeal subunits are designated by letters and can be divided into three functional groups that are engaged in: (I) catalysis (A'/A", B'/B" or B); (II) assembly (L, N, D and P); and (III) auxiliary functions (F, E, H and K). The assembly of the two largest archaeal RNAP subunits that provide most of the enzyme's catalytic functions depends on the presence of the archaeal D/L heterodimer.
Probab=48.03 E-value=1.2e+02 Score=23.00 Aligned_cols=66 Identities=15% Similarity=0.151 Sum_probs=38.2
Q ss_pred cEEEEEecCCCCCC-HHHHHHHHHh-cCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHHHHHHHhc
Q 011057 374 PLVAFSLKDNKRHD-EFEVAELLRR-FGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDS 446 (494)
Q Consensus 374 ~~v~f~~~~~~~~~-~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~~~~~l~~ 446 (494)
+-..|.+.+. +.. ..-+...|.+ .++.+.+|..|--....-.+|+-.....++ .++|+++++.+.+
T Consensus 9 n~~~~~i~~E-DHTlgNlLr~~L~~~~~V~fAgY~vpHPl~~~~~lrIqT~~~~~p------~~al~~a~~~l~~ 76 (83)
T cd06927 9 NELELEIEGE-DHTLLNLLKEELLRDPGVKVASYDIEHPLLSNPVLKIKTDGGVDP------LEALKEAAKRLID 76 (83)
T ss_pred CEEEEEEeCC-CchHHHHHHHHHhcCCCeEEEEeecCCCCCCccEEEEEeCCCCCH------HHHHHHHHHHHHH
Confidence 4555666543 222 3455555554 678878887765555677899987764444 2444444444433
No 404
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=45.90 E-value=98 Score=32.41 Aligned_cols=73 Identities=10% Similarity=-0.080 Sum_probs=49.4
Q ss_pred HHHHHHcC-CeeEEEeccCCccccCHHHHHHhhhh-CCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEec
Q 011057 168 EKFARYFE-VELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDA 245 (494)
Q Consensus 168 ~~~~~~~G-~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (494)
..+++..| .+|+.++...+ .++.+++.+.+.+ ++.+|.++. .|..+....++++.+|+..+ ++.+++=|
T Consensus 29 Aa~L~~~G~~~V~iiD~~~~--~~~~~~~~~~l~~~~pdvVgis~---~t~~~~~a~~~~~~~k~~~P----~~~iV~GG 99 (497)
T TIGR02026 29 GGALLDAGYHDVTFLDAMTG--PLTDEKLVERLRAHCPDLVLITA---ITPAIYIACETLKFARERLP----NAIIVLGG 99 (497)
T ss_pred HHHHHhcCCcceEEeccccc--CCCHHHHHHHHHhcCcCEEEEec---CcccHHHHHHHHHHHHHHCC----CCEEEEcC
Confidence 33455568 57888876542 5777888887765 567776653 23455566788888887622 89999988
Q ss_pred cccc
Q 011057 246 ASGG 249 (494)
Q Consensus 246 a~~~ 249 (494)
.|..
T Consensus 100 ~h~t 103 (497)
T TIGR02026 100 IHPT 103 (497)
T ss_pred CCcC
Confidence 8754
No 405
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=43.43 E-value=28 Score=28.87 Aligned_cols=38 Identities=18% Similarity=0.265 Sum_probs=24.1
Q ss_pred HHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEE
Q 011057 194 KAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHV 243 (494)
Q Consensus 194 ~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (494)
.+++.+..++.+|+++.+. .+-+++.++|+++ +++++.
T Consensus 73 ~l~~l~~~~~P~iIvt~~~------~~p~~l~e~a~~~------~ipll~ 110 (127)
T PF02603_consen 73 RLEKLFSYNPPCIIVTRGL------EPPPELIELAEKY------NIPLLR 110 (127)
T ss_dssp HHHHHCTTT-S-EEEETTT---------HHHHHHHHHC------T--EEE
T ss_pred HHHHHhCCCCCEEEEECcC------CCCHHHHHHHHHh------CCcEEE
Confidence 3444555678899998887 4579999999999 887764
No 406
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=42.03 E-value=1.5e+02 Score=27.21 Aligned_cols=66 Identities=6% Similarity=-0.051 Sum_probs=41.6
Q ss_pred HHHHHHHHcCCeeEEE-eccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEE
Q 011057 166 CWEKFARYFEVELKEV-KLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHV 243 (494)
Q Consensus 166 s~~~~~~~~G~~v~~v-~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (494)
.+.++++.+|..+..+ +...+ ...-.+.++.++..++.+|++...... .+..+.+-|++. |++++.
T Consensus 19 g~~~~a~~~g~~~~~~~~~~~d-~~~q~~~i~~~i~~~~d~Iiv~~~~~~-----~~~~~l~~~~~~------gIpvv~ 85 (257)
T PF13407_consen 19 GAKAAAKELGYEVEIVFDAQND-PEEQIEQIEQAISQGVDGIIVSPVDPD-----SLAPFLEKAKAA------GIPVVT 85 (257)
T ss_dssp HHHHHHHHHTCEEEEEEESTTT-HHHHHHHHHHHHHTTESEEEEESSSTT-----TTHHHHHHHHHT------TSEEEE
T ss_pred HHHHHHHHcCCEEEEeCCCCCC-HHHHHHHHHHHHHhcCCEEEecCCCHH-----HHHHHHHHHhhc------CceEEE
Confidence 3455677889998886 44332 233346677778888777775544332 344556667777 887654
No 407
>PLN02672 methionine S-methyltransferase
Probab=40.97 E-value=4.9e+02 Score=30.24 Aligned_cols=144 Identities=12% Similarity=0.062 Sum_probs=82.7
Q ss_pred HHHHHHhcccCC-CCCCChhhHHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011057 74 KLMMAAINKNYV-DMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPF 152 (494)
Q Consensus 74 ~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~ 152 (494)
..+...+..+.. .+....+...+++-+...+..+++.+-.. ..+++..+-..|+-.+++...-+.
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----------- 473 (1082)
T PLN02672 408 AYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTP---DNVVVFPSRAVAIENALRLFSPRL----------- 473 (1082)
T ss_pred HHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCc---cceEEeccHHHHHHHHHHhhChHH-----------
Confidence 344555655543 33443477888888888899999998632 347777777777765555442211
Q ss_pred CCCeEE----eCCCcchHHHHHHHHcC--------CeeEEEeccCCccccCHHHHHHhhhh-CCeEEEEeeCCCCccccc
Q 011057 153 DKPNIV----TGANVQVCWEKFARYFE--------VELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAAILGSTLNGEFE 219 (494)
Q Consensus 153 ~~~~vi----~~~~~h~s~~~~~~~~G--------~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~~~~~~tG~~~ 219 (494)
.+ ++..-+..|..+....| ..+..+.... .-| .+.++|.+ ++.+|+........-+..
T Consensus 474 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (1082)
T PLN02672 474 ----AIVDEHLTRWLPKKWLTSLAIENATSDSKSDDVITVIEAPR---QSD--LVIELIKKLKPQVVVTGMADFEMRTST 544 (1082)
T ss_pred ----HhhhhhhhccCCHHHHhHhhhhcccccCccCCeEEEEeCCC---cch--HHHHHHHhCCCeEEEEeccchhhhhHH
Confidence 11 12223334444444433 2233333211 223 34444444 456666555555444445
Q ss_pred CHHHHHHHHHHhhcccCCCceEEEecc
Q 011057 220 DVKLLNDLLAEKNKETGWDTPIHVDAA 246 (494)
Q Consensus 220 ~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (494)
-++.|.+.+++. |+++++|..
T Consensus 545 ~~~~~~~~~~~~------~~~~~~~~~ 565 (1082)
T PLN02672 545 AFEHLLNVTAEI------GARLFLDIS 565 (1082)
T ss_pred HHHHHHHHHHhh------CcEEEEehh
Confidence 678899999999 999999963
No 408
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=40.68 E-value=23 Score=37.77 Aligned_cols=40 Identities=20% Similarity=0.153 Sum_probs=35.7
Q ss_pred EEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccc
Q 011057 205 CVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGF 250 (494)
Q Consensus 205 ~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~ 250 (494)
.+..-+|++..|+-++++++++-||+. ||-|++|-+++.|
T Consensus 200 ~~g~yAp~sryGtPedfk~fVD~aH~~------GIgViLD~V~~HF 239 (628)
T COG0296 200 GTGYYAPTSRYGTPEDFKALVDAAHQA------GIGVILDWVPNHF 239 (628)
T ss_pred cceeccccccCCCHHHHHHHHHHHHHc------CCEEEEEecCCcC
Confidence 345567889999999999999999999 9999999999875
No 409
>COG3147 DedD Uncharacterized protein conserved in bacteria [Function unknown]
Probab=40.38 E-value=86 Score=28.35 Aligned_cols=51 Identities=27% Similarity=0.345 Sum_probs=34.4
Q ss_pred CHHHHHHHHHhcCceeeccccCCCCCCceEEEEEeccCCChHHHHHHHHHHHH
Q 011057 387 DEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVLDITK 439 (494)
Q Consensus 387 ~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~~~id~~i~~l~~ 439 (494)
+..+++.+|+..|+-. |+.+.+.....+-|+-++...+++..+++...|+.
T Consensus 164 ranel~~~Lr~~G~~a--yi~~~~p~qg~ltRv~vGP~~sr~~a~~~~~el~q 214 (226)
T COG3147 164 RANELVAKLRGAGYRA--YIEPSTPVQGDLTRVRVGPDASRAKAEGLLGELEQ 214 (226)
T ss_pred HHHHHHHHHHhCCCce--eecccCCCCCceeEEEecCcccHHHHHHHHHHHHH
Confidence 4567888888888754 55554444556788888988888776655544443
No 410
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=40.17 E-value=72 Score=30.77 Aligned_cols=77 Identities=19% Similarity=0.078 Sum_probs=46.9
Q ss_pred eeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhh
Q 011057 120 GVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMV 199 (494)
Q Consensus 120 ~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i 199 (494)
++=.++|..++-+|+.++..-+ +-.+++|+..-.--.+..+.+|++++.+|..++...--.+.+++..
T Consensus 65 IVE~TSGNTGI~LA~vaa~~Gy------------~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~ 132 (300)
T COG0031 65 IVEATSGNTGIALAMVAAAKGY------------RLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELA 132 (300)
T ss_pred EEEcCCChHHHHHHHHHHHcCC------------cEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHH
Confidence 5556677777777777764421 2356778776667777889999999999874421111234444444
Q ss_pred hhCCe-EEEE
Q 011057 200 DENTI-CVAA 208 (494)
Q Consensus 200 ~~~t~-~vv~ 208 (494)
.+.+. ++..
T Consensus 133 ~~~p~~~~~~ 142 (300)
T COG0031 133 AEIPGYAVWL 142 (300)
T ss_pred HhCCCceEch
Confidence 44443 4443
No 411
>PRK14994 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional
Probab=39.65 E-value=3e+02 Score=26.45 Aligned_cols=85 Identities=8% Similarity=-0.041 Sum_probs=53.4
Q ss_pred CeEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcc
Q 011057 155 PNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKE 234 (494)
Q Consensus 155 ~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~ 234 (494)
+.|++.+.-+. .+....++.....+.+.+.++.-..+.+.+.+.+...+++++..-+| +..+|-..+.+.|++.
T Consensus 39 DvI~~edtr~t--~~ll~~~~i~~~~~~~~~~~~~~~~~~i~~~l~~G~~ValvSdaGdP-~I~dpg~~Lv~~~~~~--- 112 (287)
T PRK14994 39 DLIAAEDTRHT--GLLLQHFAINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTP-LINDPGYHLVRTCREA--- 112 (287)
T ss_pred CEEEEeCCcch--HHHHhhcCCCCEEEEccCCCHHHHHHHHHHHHHCCCeEEEEccCCCC-ceeCCHHHHHHHHHHC---
Confidence 56777776665 33566677665666665432333345555666665556666644455 7789999999999988
Q ss_pred cCCCceE-EEecccc
Q 011057 235 TGWDTPI-HVDAASG 248 (494)
Q Consensus 235 ~~~~~~l-~vD~a~~ 248 (494)
|+.+ ++=|+.+
T Consensus 113 ---gi~v~vIPGiSA 124 (287)
T PRK14994 113 ---GIRVVPLPGPCA 124 (287)
T ss_pred ---CCCEEEeCCHHH
Confidence 7744 4555544
No 412
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=37.52 E-value=2.3e+02 Score=27.58 Aligned_cols=55 Identities=13% Similarity=0.166 Sum_probs=39.3
Q ss_pred cccCHHHHHHhhh---h--CCeEEEEeeCCCCcccccC-HHHHHHHHHHhhcccCCCceEEEecccc
Q 011057 188 YVMDPVKAVEMVD---E--NTICVAAILGSTLNGEFED-VKLLNDLLAEKNKETGWDTPIHVDAASG 248 (494)
Q Consensus 188 ~~~d~~~L~~~i~---~--~t~~vv~~~~~~~tG~~~~-l~~I~~la~~~~~~~~~~~~l~vD~a~~ 248 (494)
..++.+++++.++ . ...-+++.+|+-|.|.-.+ ..+|.++|++. ++.+++|....
T Consensus 109 p~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~------g~~vilD~Sg~ 169 (310)
T COG1105 109 PEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQ------GAKVILDTSGE 169 (310)
T ss_pred CCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhc------CCeEEEECChH
Confidence 3566666655443 2 1233566788889888754 79999999999 99999997543
No 413
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=37.39 E-value=72 Score=31.95 Aligned_cols=79 Identities=19% Similarity=0.268 Sum_probs=47.5
Q ss_pred EeCCCcchHHHHHHHHc--CCeeEEEeccCCccccCHHHHHHhhhh---CCeEEEEeeCCCCcccccCHHHHHHHHHHhh
Q 011057 158 VTGANVQVCWEKFARYF--EVELKEVKLSEGYYVMDPVKAVEMVDE---NTICVAAILGSTLNGEFEDVKLLNDLLAEKN 232 (494)
Q Consensus 158 i~~~~~h~s~~~~~~~~--G~~v~~v~~~~~~~~~d~~~L~~~i~~---~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~ 232 (494)
++....|....+. +.+ .-++.+++-.+.....+.+.|.+.+.. +..+|++ ..+.-|.+.+++.+.++|++.
T Consensus 95 l~~~~~r~T~~K~-Rv~s~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vVL--SDY~KG~L~~~q~~I~~ar~~- 170 (467)
T COG2870 95 LLRDKNRPTIVKL-RVLSRNQQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALVL--SDYAKGVLTNVQKMIDLAREA- 170 (467)
T ss_pred eEeecCCCceeee-eeecccceEEEecccccCcchhHHHHHHHHHHHhhcCCEEEE--eccccccchhHHHHHHHHHHc-
Confidence 3344455554443 222 223445544332122344555555544 2344543 557789999999999999999
Q ss_pred cccCCCceEEEec
Q 011057 233 KETGWDTPIHVDA 245 (494)
Q Consensus 233 ~~~~~~~~l~vD~ 245 (494)
++++.+|-
T Consensus 171 -----~~pVLvDP 178 (467)
T COG2870 171 -----GIPVLVDP 178 (467)
T ss_pred -----CCcEEECC
Confidence 99999994
No 414
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=36.35 E-value=1.4e+02 Score=20.53 Aligned_cols=52 Identities=15% Similarity=0.191 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhhCCCeEEeecCCCccEEEEEecCCCCCCHHHHHHHHHhcCc
Q 011057 348 HENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGW 400 (494)
Q Consensus 348 ~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi 400 (494)
..-++.+.+.|.+++|+.-+.-....+.+.+.+.+. ..+..++.+.+.+-|+
T Consensus 10 ~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~-~~~~~~i~~~i~~~Gy 61 (62)
T PF00403_consen 10 EGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPD-KTSIEKIIEAIEKAGY 61 (62)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTT-TSCHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecC-CCCHHHHHHHHHHhCc
Confidence 345677888999999876332211346777777553 3567899999998875
No 415
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=34.09 E-value=93 Score=29.12 Aligned_cols=27 Identities=26% Similarity=0.363 Sum_probs=22.9
Q ss_pred ccccCHHHHHHHHHHhhcccCCCceEEEecccc
Q 011057 216 GEFEDVKLLNDLLAEKNKETGWDTPIHVDAASG 248 (494)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~ 248 (494)
|-.-..+++.++.+++ ++-++||+.|-
T Consensus 50 ~G~l~~e~l~~~l~e~------~i~llIDATHP 76 (257)
T COG2099 50 GGFLGAEGLAAFLREE------GIDLLIDATHP 76 (257)
T ss_pred cCcCCHHHHHHHHHHc------CCCEEEECCCh
Confidence 3345688999999999 99999999983
No 416
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=33.63 E-value=4.3e+02 Score=27.33 Aligned_cols=127 Identities=19% Similarity=0.124 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCcceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeC-CCcch---HHHH
Q 011057 94 TELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTG-ANVQV---CWEK 169 (494)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~-~~~h~---s~~~ 169 (494)
.++++.+.+.+.+.+..+. ..+++.|||-.+..++..+.... .. ....--.+-.+ ..... ...+
T Consensus 236 e~l~~~l~~aV~~r~~~~~-----~vg~~LSGGlDSs~iaa~a~~~~--~~-----~~~~~~t~~~~~~~~~~E~~~A~~ 303 (467)
T TIGR01536 236 DELRSLLEDAVKRRLVADV-----PVGVLLSGGLDSSLVAAIARREA--PR-----GPVHTFSIGFEGSPDFDESPYARK 303 (467)
T ss_pred HHHHHHHHHHHHHHhccCC-----ceEEEecCChhHHHHHHHHHHhc--CC-----CCceEEEEecCCCCCCChHHHHHH
Confidence 3455555555655544332 45888999999987766554321 00 00000012222 12222 4566
Q ss_pred HHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccc
Q 011057 170 FARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASG 248 (494)
Q Consensus 170 ~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~ 248 (494)
.++.+|.+...+.++++.+ .+.+.+.+...- .|... ....+.-.+++.++++ |+-++++|--+
T Consensus 304 vA~~lg~~~~~i~~~~~~~---~~~~~~~v~~~~------~p~~~-~~~~~~~~l~~~a~~~------G~~vlltG~Ga 366 (467)
T TIGR01536 304 VADHLGTEHHEVLFSVEEG---LDALPEVIYHLE------DPTTI-RASIPLYLLSKLARED------GVKVVLSGEGA 366 (467)
T ss_pred HHHHhCCcCeEEECCHHHH---HHHHHHHHHhhC------CCCCC-chHHHHHHHHHHHHhc------CCEEEEecCcc
Confidence 7888999988887754311 223333332110 11111 1223456778888888 88888877443
No 417
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=31.91 E-value=1.2e+02 Score=24.35 Aligned_cols=42 Identities=14% Similarity=0.221 Sum_probs=34.5
Q ss_pred cccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHh
Q 011057 188 YVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEK 231 (494)
Q Consensus 188 ~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~ 231 (494)
..+++++|++.+.+++-.|++ |+-.+|.+.-.++..+++++.
T Consensus 47 Hkl~~eEle~~lee~~E~ivv--GTG~~G~l~l~~ea~e~~r~k 88 (121)
T COG1504 47 HKLALEELEELLEEGPEVIVV--GTGQSGMLELSEEAREFFRKK 88 (121)
T ss_pred cccCHHHHHHHHhcCCcEEEE--ecCceeEEEeCHHHHHHHHhc
Confidence 479999999999998876654 666778888778888999888
No 418
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=31.25 E-value=2.8e+02 Score=24.08 Aligned_cols=77 Identities=12% Similarity=-0.081 Sum_probs=46.9
Q ss_pred eEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhccc
Q 011057 156 NIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKET 235 (494)
Q Consensus 156 ~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~ 235 (494)
+++....+...+..++...|.+++...-+.| -.|-+|.++-+.+++...+++.++.. |...+++.+++.
T Consensus 60 R~Y~~a~a~~~l~~~l~~~Gf~pv~~kG~~D-v~laIDame~~~~~~iD~~vLvSgD~------DF~~Lv~~lre~---- 128 (160)
T TIGR00288 60 KVLLNQYASDKLIEAVVNQGFEPIIVAGDVD-VRMAVEAMELIYNPNIDAVALVTRDA------DFLPVINKAKEN---- 128 (160)
T ss_pred EEEechhccHHHHHHHHHCCceEEEecCccc-HHHHHHHHHHhccCCCCEEEEEeccH------hHHHHHHHHHHC----
Confidence 3454444455667777888888765432222 23444566555455555666655542 467778888888
Q ss_pred CCCceEEEec
Q 011057 236 GWDTPIHVDA 245 (494)
Q Consensus 236 ~~~~~l~vD~ 245 (494)
|..+++=|
T Consensus 129 --G~~V~v~g 136 (160)
T TIGR00288 129 --GKETIVIG 136 (160)
T ss_pred --CCEEEEEe
Confidence 88877644
No 419
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=30.21 E-value=2.9e+02 Score=22.25 Aligned_cols=75 Identities=15% Similarity=0.086 Sum_probs=43.9
Q ss_pred eEEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCC--CCcccccCHHHHHHHHHHhhc
Q 011057 156 NIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGS--TLNGEFEDVKLLNDLLAEKNK 233 (494)
Q Consensus 156 ~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~--~~tG~~~~l~~I~~la~~~~~ 233 (494)
+++.+..+.-.+.+ ..|+.++.|+.....+. .++.+.|.....-+++..++ ...+...+-..|.+.|-++
T Consensus 29 ~i~AT~gTa~~L~~---~~Gi~v~~vk~~~~~g~---~~i~~~i~~g~i~~VInt~~~~~~~~~~~dg~~iRr~a~~~-- 100 (115)
T cd01422 29 RLVATGTTGLLIQE---ATGLTVNRMKSGPLGGD---QQIGALIAEGEIDAVIFFRDPLTAQPHEPDVKALLRLCDVY-- 100 (115)
T ss_pred EEEEechHHHHHHH---hhCCcEEEEecCCCCch---hHHHHHHHcCceeEEEEcCCCCCCCcccccHHHHHHHHHHc--
Confidence 45555533322222 15888888855222233 44666666665555555554 3333356788999999999
Q ss_pred ccCCCceEE
Q 011057 234 ETGWDTPIH 242 (494)
Q Consensus 234 ~~~~~~~l~ 242 (494)
+++++
T Consensus 101 ----~Ip~~ 105 (115)
T cd01422 101 ----NIPLA 105 (115)
T ss_pred ----CCCEE
Confidence 88765
No 420
>PRK01146 DNA-directed RNA polymerase subunit L; Provisional
Probab=29.20 E-value=2.6e+02 Score=21.29 Aligned_cols=61 Identities=13% Similarity=0.157 Sum_probs=35.6
Q ss_pred eEEeecCCCccEEEEEecCCCCCC-HHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCCh
Q 011057 364 FNIVSKDEGVPLVAFSLKDNKRHD-EFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSR 427 (494)
Q Consensus 364 ~~~~~~~~~~~~v~f~~~~~~~~~-~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~ 427 (494)
++++... -+-..|.+.+. +.. ..-+...|. +.++.+.+|..|--..+.-.+|+......++
T Consensus 3 ikvi~~~--~n~~~~~i~~E-DHTlgNlLr~~L~~~~~V~fAgY~vpHPl~~~~~lrIqt~~~~~p 65 (85)
T PRK01146 3 IKVLEKE--DNELELEIEGE-DHTLMNLLKEELLEDPGVEAASYDIDHPLISNPVLKIKTDGGIDP 65 (85)
T ss_pred EEEEecC--CCEEEEEEeCC-CchHHHHHHHHHhcCCCeeEEEeecCCCCCCccEEEEEECCCCCH
Confidence 5566553 34556666543 222 334555544 5577777777765455677799987755554
No 421
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=28.68 E-value=1.3e+02 Score=28.25 Aligned_cols=97 Identities=16% Similarity=0.152 Sum_probs=54.9
Q ss_pred eeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEE--eCCCcch--H---HHHHHHHcCCeeEEEeccCCccccCH
Q 011057 120 GVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIV--TGANVQV--C---WEKFARYFEVELKEVKLSEGYYVMDP 192 (494)
Q Consensus 120 ~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi--~~~~~h~--s---~~~~~~~~G~~v~~v~~~~~~~~~d~ 192 (494)
.+..|||..+..++.++.-. .| +..+. +..+.-+ . ....++..|++...++++ .|++
T Consensus 21 ~vAfSGGvDSslLa~la~~~--------lG----~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~~----~~~~ 84 (269)
T COG1606 21 VVAFSGGVDSSLLAKLAKEA--------LG----DNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKMN----RMDP 84 (269)
T ss_pred EEEecCCccHHHHHHHHHHH--------hc----cceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeehh----hcch
Confidence 67788999998877665422 22 12222 2222222 2 233466779998888864 2442
Q ss_pred HHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccccc
Q 011057 193 VKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGG 249 (494)
Q Consensus 193 ~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (494)
+ +... +..++ +.+.-+=.+.|.+.++++ |.-+++||+.+.
T Consensus 85 ~-~~~n--~~~rC--------Y~CK~~v~~~l~~~a~~~------Gyd~V~dGtNas 124 (269)
T COG1606 85 E-FKEN--PENRC--------YLCKRAVYSTLVEEAEKR------GYDVVADGTNAS 124 (269)
T ss_pred h-hccC--CCCcc--------hHHHHHHHHHHHHHHHHc------CCCEEEeCCcHH
Confidence 2 1110 00011 112223367788899999 999999998864
No 422
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=28.22 E-value=15 Score=32.40 Aligned_cols=49 Identities=16% Similarity=0.214 Sum_probs=34.0
Q ss_pred HHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccc
Q 011057 193 VKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGF 250 (494)
Q Consensus 193 ~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~ 250 (494)
+.|+.+++.+...|++.. |.+..++++.+.++++.+ -+++|+|=..|.+
T Consensus 10 ~~l~~al~s~~~~vfLl~-----g~I~~l~~~v~~~~~~gK----~vfVHiDli~Gl~ 58 (175)
T PF04309_consen 10 EDLEKALESDVEVVFLLT-----GDIGNLKDIVKRLKAAGK----KVFVHIDLIEGLS 58 (175)
T ss_dssp CCCCCCCCSSSSEEEE-S-----EECCCHHHHHHHHHHTT-----EEEEECCGEETB-
T ss_pred HHHHHHHcCCCCEEEEEc-----CcHHHHHHHHHHHHHcCC----EEEEEehhcCCCC
Confidence 345566666655555533 677899999999999833 5789999877764
No 423
>cd07029 RNAP_I_III_AC19 AC19 subunit of Eukaryotic RNA polymerase (RNAP) I and RNAP III. The eukaryotic AC19 subunit of RNA polymerase (RNAP) I and RNAP III is involved in the assembly of RNAP subunits. RNAP is a large multi-subunit complex responsible for the synthesis of RNA. It is the principal enzyme of the transcription process, and is a final target in many regulatory pathways that control gene expression in all living cells. At least three distinct RNAP complexes are found in eukaryotic nuclei: RNAP I, RNAP II, and RNAP III. RNAP I is responsible for the synthesis of ribosomal RNA precursor, while RNAP III functions in the synthesis of 5S and tRNA. The AC19 subunit is the equivalent of the RPB11 subunit of RNAP II. The RPB11 subunit heterodimerizes with the RPB3 subunit, and together with RPB10 and RPB12, anchors the two largest subunits, RPB1 and RPB2, and stabilizes their association. The homology of AC19 to RPB11 suggests a similar function. The AC19 subunit is likely to ass
Probab=27.79 E-value=2.8e+02 Score=21.15 Aligned_cols=53 Identities=11% Similarity=0.148 Sum_probs=31.1
Q ss_pred cEEEEEecCCCCCC-HHHHHHHHH-hcCceeeccccCCCCCCceEEEEEeccCCCh
Q 011057 374 PLVAFSLKDNKRHD-EFEVAELLR-RFGWIVPAYTMPADAQHITVLRVVIREDFSR 427 (494)
Q Consensus 374 ~~v~f~~~~~~~~~-~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~ 427 (494)
+...|.+.+.+ .. ..-+...|. +.++.+.+|..|--....-.+|+......++
T Consensus 9 n~~~~~i~~Ed-HTLgNlLr~~L~~~p~V~fagY~vpHPl~~~~~lriqT~~~~~p 63 (85)
T cd07029 9 SCATFVFYGED-HTLGNSLRYVIMKNPEVEFCGYSIPHPSENKINLRIQTKGGEPA 63 (85)
T ss_pred CeEEEEEeCCC-cchHHHHHHHHhhCCCceEEeecccCCCCCccEEEEEeCCCCCH
Confidence 44556665432 22 334555554 4577777787764445567799988764444
No 424
>PF11080 DUF2622: Protein of unknown function (DUF2622); InterPro: IPR022597 This family is conserved in the Enterobacteriaceae family. The function is not known.
Probab=27.46 E-value=2.5e+02 Score=21.99 Aligned_cols=63 Identities=16% Similarity=0.202 Sum_probs=32.6
Q ss_pred EEEEEecCCCCCCHHHHHHHHHhcCceeeccccC-CCCCCceEEEEEeccCCChHHHHHHHHHHH
Q 011057 375 LVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMP-ADAQHITVLRVVIREDFSRTLAERLVLDIT 438 (494)
Q Consensus 375 ~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~-~~~~~~~~lRvs~~~~~t~~~id~~i~~l~ 438 (494)
+|.|.+....--+..++..+|...|+... .... +.+..-+.-.+.+....+.+++.++++.|.
T Consensus 10 VVt~~~~e~~l~d~~~L~~~lt~~GF~~t-l~D~~G~~HeLgtntfgl~S~l~~~eV~~la~~la 73 (96)
T PF11080_consen 10 VVTFEYQEAGLTDINELNNHLTRAGFSTT-LTDEDGNPHELGTNTFGLISALSAEEVAQLARGLA 73 (96)
T ss_pred EEEEEeccCChHHHHHHHHHHHhcCceeE-EecCCCCEeecCCCeEEEEecCCHHHHHHHHHHHh
Confidence 56677765432335688889999998631 1111 000001112334444557777766655554
No 425
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=27.22 E-value=6.1e+02 Score=24.98 Aligned_cols=104 Identities=10% Similarity=0.034 Sum_probs=56.6
Q ss_pred ceeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcc------hHHHHHHHHcCCeeEEEeccCCccccCH
Q 011057 119 VGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQ------VCWEKFARYFEVELKEVKLSEGYYVMDP 192 (494)
Q Consensus 119 ~~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h------~s~~~~~~~~G~~v~~v~~~~~~~~~d~ 192 (494)
.++..|||-.+..++..+... .|. ++.++.-+..+ --..+.++.+|+....+.++.
T Consensus 62 ~iV~lSGGkDSs~la~ll~~~--------~gl---~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~d~------- 123 (343)
T TIGR03573 62 CIIGVSGGKDSTYQAHVLKKK--------LGL---NPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITINP------- 123 (343)
T ss_pred EEEECCCCHHHHHHHHHHHHH--------hCC---ceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeCCH-------
Confidence 577889999998876444322 121 12212212222 135666777899988887643
Q ss_pred HHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccccc
Q 011057 193 VKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGG 249 (494)
Q Consensus 193 ~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (494)
+.+.+....... -...+..+ ........+.++|+++ |+.+++.|.++.
T Consensus 124 ~~~~~l~~~~~~--~~~~pc~~-c~~~~~~~l~~~A~~~------gi~~Il~G~~~d 171 (343)
T TIGR03573 124 ETFRKLQRAYFK--KVGDPEWP-QDHAIFASVYQVALKF------NIPLIIWGENIA 171 (343)
T ss_pred HHHHHHHHHHHh--ccCCCchh-hhhHHHHHHHHHHHHh------CCCEEEeCCCHH
Confidence 222222211100 00112222 1122357788999999 999999997754
No 426
>smart00642 Aamy Alpha-amylase domain.
Probab=26.90 E-value=55 Score=28.54 Aligned_cols=30 Identities=23% Similarity=0.238 Sum_probs=26.5
Q ss_pred CcccccCHHHHHHHHHHhhcccCCCceEEEeccccc
Q 011057 214 LNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGG 249 (494)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (494)
..|+.++++++++-||++ |+.+++|-+.-.
T Consensus 65 ~~Gt~~d~~~lv~~~h~~------Gi~vilD~V~NH 94 (166)
T smart00642 65 RFGTMEDFKELVDAAHAR------GIKVILDVVINH 94 (166)
T ss_pred ccCCHHHHHHHHHHHHHC------CCEEEEEECCCC
Confidence 458889999999999999 999999987654
No 427
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=26.59 E-value=53 Score=31.37 Aligned_cols=35 Identities=20% Similarity=0.193 Sum_probs=29.8
Q ss_pred eeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccccc
Q 011057 209 ILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGG 249 (494)
Q Consensus 209 ~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (494)
..+....|+.++++++++.||++ |+-|++|-+...
T Consensus 42 ~~vd~~~Gt~~d~~~Lv~~~h~~------gi~VilD~V~NH 76 (316)
T PF00128_consen 42 YAVDPRFGTMEDFKELVDAAHKR------GIKVILDVVPNH 76 (316)
T ss_dssp EEESTTTBHHHHHHHHHHHHHHT------TCEEEEEEETSE
T ss_pred eccccccchhhhhhhhhhccccc------cceEEEeeeccc
Confidence 34566679999999999999999 999999987653
No 428
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=26.25 E-value=4.9e+02 Score=23.53 Aligned_cols=67 Identities=16% Similarity=0.105 Sum_probs=37.3
Q ss_pred EEeCCCcchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHh
Q 011057 157 IVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEK 231 (494)
Q Consensus 157 vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~ 231 (494)
+++-+ .........+..|++++..+. -|.+.|.+++..-. .|+++.+.......+--..|.+.|++.
T Consensus 27 ~l~R~-~~~~~~~~l~~~g~~vv~~d~------~~~~~l~~al~g~d-~v~~~~~~~~~~~~~~~~~li~Aa~~a 93 (233)
T PF05368_consen 27 ALVRD-PSSDRAQQLQALGAEVVEADY------DDPESLVAALKGVD-AVFSVTPPSHPSELEQQKNLIDAAKAA 93 (233)
T ss_dssp EEESS-SHHHHHHHHHHTTTEEEES-T------T-HHHHHHHHTTCS-EEEEESSCSCCCHHHHHHHHHHHHHHH
T ss_pred EEEec-cchhhhhhhhcccceEeeccc------CCHHHHHHHHcCCc-eEEeecCcchhhhhhhhhhHHHhhhcc
Confidence 34443 333333444556877653332 27799999988544 444555544334444456788888887
No 429
>PLN02913 dihydrofolate synthetase
Probab=25.97 E-value=2.7e+02 Score=29.28 Aligned_cols=70 Identities=21% Similarity=0.241 Sum_probs=44.8
Q ss_pred ccEEEEEecCCCCCCHHHHHHHHHhcCceeeccccCCCCCCceEEEEEec---cCCChHHHHHHHHHHHHHHHHH
Q 011057 373 VPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVVIR---EDFSRTLAERLVLDITKVLHEL 444 (494)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRvs~~---~~~t~~~id~~i~~l~~~~~~l 444 (494)
.+++.+.=.++++-.+.-+...|.+.|.-+..+++|.-..-.. ||.+. ...+.+++.++.+.++.+.+.+
T Consensus 75 ~~vIhVaGTNGKGSt~a~l~~iL~~aG~~vG~fTSPHl~~~~E--Ri~in~~g~~is~~~~~~~~~~v~~~~~~~ 147 (510)
T PLN02913 75 FKAVHVAGTKGKGSTAAFLSNILRAQGYSVGCYTSPHLRSIRE--RISVGKLGKPVSTNTLNDLFHGIKPILDEA 147 (510)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHHhcCCCeEEECCCCCceece--EEEECCCCCcCCHHHHHHHHHHHHHHHHHh
Confidence 3444433223334445667778889999988888886443333 45543 6778888877777777776654
No 430
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=25.59 E-value=1.4e+02 Score=26.22 Aligned_cols=52 Identities=21% Similarity=0.153 Sum_probs=37.0
Q ss_pred cccCHHHHHHhhhhCCeEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEecccccc
Q 011057 188 YVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGF 250 (494)
Q Consensus 188 ~~~d~~~L~~~i~~~t~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~ 250 (494)
|.-|...|.++++. -++.|.|+.- ...-++.|.++.++. +++++.|.=++|-
T Consensus 10 GK~D~~~lk~~~d~---~~I~T~Gs~i--~~~~i~~i~~~~~~r------gVIIfTDpD~~Ge 61 (174)
T TIGR00334 10 GKDDQARIKQAFDV---DVIETNGSAL--KDETINLIKKAQKKQ------GVIILTDPDFPGE 61 (174)
T ss_pred cchHHHHHHHhcCc---eEEEECCCcc--CHHHHHHHHHHhhcC------CEEEEeCCCCchH
Confidence 57788999888852 3455666542 234477777778888 9999999877764
No 431
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=24.91 E-value=3.2e+02 Score=22.92 Aligned_cols=58 Identities=12% Similarity=0.048 Sum_probs=34.3
Q ss_pred cchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh---CCeEEEEeeCCCCcccccCHHHHH
Q 011057 163 VQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE---NTICVAAILGSTLNGEFEDVKLLN 225 (494)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~t~~vv~~~~~~~tG~~~~l~~I~ 225 (494)
.-+.+...++..|+++....+-.| |.++|.+.+.+ +..+|+. .|-+..|..|-..+..
T Consensus 28 n~~~l~~~l~~~G~~v~~~~~v~D----d~~~i~~~l~~~~~~~DliIt-tGG~g~g~~D~t~~ai 88 (144)
T TIGR00177 28 NGPLLAALLEEAGFNVSRLGIVPD----DPEEIREILRKAVDEADVVLT-TGGTGVGPRDVTPEAL 88 (144)
T ss_pred cHHHHHHHHHHCCCeEEEEeecCC----CHHHHHHHHHHHHhCCCEEEE-CCCCCCCCCccHHHHH
Confidence 334667777888999888776443 34445444432 3344544 4556667776655543
No 432
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=24.50 E-value=5.2e+02 Score=26.33 Aligned_cols=80 Identities=13% Similarity=0.067 Sum_probs=48.6
Q ss_pred CeEEeCCCcch-HHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh-CCeEEEEeeCCC--------CcccccCHH--
Q 011057 155 PNIVTGANVQV-CWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAAILGST--------LNGEFEDVK-- 222 (494)
Q Consensus 155 ~~vi~~~~~h~-s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~~~~~--------~tG~~~~l~-- 222 (494)
..++++...-. -+.--++++|+....+.+-. ..+++++.+.++. ++.++++-+..| ..|++.-++
T Consensus 122 ~vLYVsGEES~~QiklRA~RL~~~~~~l~l~a---Et~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~ 198 (456)
T COG1066 122 KVLYVSGEESLQQIKLRADRLGLPTNNLYLLA---ETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREV 198 (456)
T ss_pred cEEEEeCCcCHHHHHHHHHHhCCCccceEEeh---hcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHH
Confidence 35666655443 34444677887554444332 4678888888875 566666654443 227775555
Q ss_pred --HHHHHHHHhhcccCCCceEEE
Q 011057 223 --LLNDLLAEKNKETGWDTPIHV 243 (494)
Q Consensus 223 --~I~~la~~~~~~~~~~~~l~v 243 (494)
+|.++||+. |+++++
T Consensus 199 t~~L~~~AK~~------~i~~fi 215 (456)
T COG1066 199 AAELMRLAKTK------NIAIFI 215 (456)
T ss_pred HHHHHHHHHHc------CCeEEE
Confidence 466778888 876654
No 433
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=23.59 E-value=1.2e+02 Score=28.38 Aligned_cols=28 Identities=25% Similarity=0.321 Sum_probs=24.1
Q ss_pred cccccCHHHHHHHHHHhhcccCCCceEEEecccc
Q 011057 215 NGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASG 248 (494)
Q Consensus 215 tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~ 248 (494)
.|.+-+.+++.++++++ ++-++||++|-
T Consensus 49 ~G~lg~~~~l~~~l~~~------~i~~vIDATHP 76 (249)
T PF02571_consen 49 VGRLGDEEGLAEFLREN------GIDAVIDATHP 76 (249)
T ss_pred ECCCCCHHHHHHHHHhC------CCcEEEECCCc
Confidence 35555789999999999 99999999994
No 434
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=23.09 E-value=2e+02 Score=26.97 Aligned_cols=29 Identities=24% Similarity=0.266 Sum_probs=24.7
Q ss_pred cccccCHHHHHHHHHHhhcccCCCceEEEeccccc
Q 011057 215 NGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGG 249 (494)
Q Consensus 215 tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (494)
.|.+.+.+++.++++++ ++-++||++|-.
T Consensus 48 ~G~l~~~~~l~~~l~~~------~i~~VIDATHPf 76 (248)
T PRK08057 48 VGGFGGAEGLAAYLREE------GIDLVIDATHPY 76 (248)
T ss_pred ECCCCCHHHHHHHHHHC------CCCEEEECCCcc
Confidence 36666789999999999 999999999843
No 435
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=22.99 E-value=2.7e+02 Score=24.09 Aligned_cols=65 Identities=11% Similarity=-0.036 Sum_probs=36.7
Q ss_pred cchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh-CCeEEEEeeCCCCcccccCHHH-HHHHH
Q 011057 163 VQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE-NTICVAAILGSTLNGEFEDVKL-LNDLL 228 (494)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~-~t~~vv~~~~~~~tG~~~~l~~-I~~la 228 (494)
..+.+...++..|+++..+.+-.|+...-.+.|+++++. +.. ++++.|-+..|..|-..+ +.++.
T Consensus 23 n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~D-lVIttGGtg~g~~D~t~eal~~l~ 89 (163)
T TIGR02667 23 SGQYLVERLTEAGHRLADRAIVKDDIYQIRAQVSAWIADPDVQ-VILITGGTGFTGRDVTPEALEPLF 89 (163)
T ss_pred cHHHHHHHHHHCCCeEEEEEEcCCCHHHHHHHHHHHHhcCCCC-EEEECCCcCCCCCCCcHHHHHHHH
Confidence 344666677888999887766444211112444444432 334 445556677788887655 44443
No 436
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=22.56 E-value=67 Score=33.45 Aligned_cols=33 Identities=21% Similarity=0.108 Sum_probs=28.5
Q ss_pred CCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccccc
Q 011057 211 GSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGG 249 (494)
Q Consensus 211 ~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (494)
.....|+.++++++++-||++ |+.|++|.+.-.
T Consensus 73 id~~fGt~~dl~~Li~~~H~~------Gi~vi~D~V~NH 105 (479)
T PRK09441 73 VRTKYGTKEELLNAIDALHEN------GIKVYADVVLNH 105 (479)
T ss_pred cCcCcCCHHHHHHHHHHHHHC------CCEEEEEECccc
Confidence 345669999999999999999 999999997643
No 437
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=22.26 E-value=4.8e+02 Score=22.02 Aligned_cols=77 Identities=16% Similarity=0.078 Sum_probs=45.9
Q ss_pred eEEeCCCcchHHHHHHHHc-CCeeEEEeccC-CccccCHHHHHHhhhhCCeEEEEeeC--CCCcccccCHHHHHHHHHHh
Q 011057 156 NIVTGANVQVCWEKFARYF-EVELKEVKLSE-GYYVMDPVKAVEMVDENTICVAAILG--STLNGEFEDVKLLNDLLAEK 231 (494)
Q Consensus 156 ~vi~~~~~h~s~~~~~~~~-G~~v~~v~~~~-~~~~~d~~~L~~~i~~~t~~vv~~~~--~~~tG~~~~l~~I~~la~~~ 231 (494)
.++.+. ...+..+.. |+.+..| +.+ .++. .++.+.|......+|++.+ +...+...+...|.+.|-++
T Consensus 34 ~l~AT~----gTa~~L~~~~Gi~v~~v-i~~~~gg~---~~i~~~I~~g~i~lVInt~dp~~~~~~~~D~~~IRR~Av~~ 105 (142)
T PRK05234 34 ELYATG----TTGGLIQEATGLDVTRL-LSGPLGGD---QQIGALIAEGKIDMLIFFRDPLTAQPHDPDVKALLRLADVW 105 (142)
T ss_pred EEEEeC----hHHHHHHhccCCeeEEE-EcCCCCCc---hhHHHHHHcCceeEEEEecCCCCCCcccchHHHHHHHHHHc
Confidence 455554 223334445 8888777 322 1122 4456666665555555544 44444356788999999999
Q ss_pred hcccCCCceEEEecc
Q 011057 232 NKETGWDTPIHVDAA 246 (494)
Q Consensus 232 ~~~~~~~~~l~vD~a 246 (494)
+++++..-+
T Consensus 106 ------~IP~~T~l~ 114 (142)
T PRK05234 106 ------NIPVATNRA 114 (142)
T ss_pred ------CCCEEcCHH
Confidence 998876643
No 438
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=22.17 E-value=4.1e+02 Score=21.85 Aligned_cols=58 Identities=14% Similarity=0.043 Sum_probs=33.8
Q ss_pred cchHHHHHHHHcCCeeEEEeccCCccccCHHHHHHhhhh---CCeEEEEeeCCCCcccccCHHHHH
Q 011057 163 VQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDE---NTICVAAILGSTLNGEFEDVKLLN 225 (494)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~---~t~~vv~~~~~~~tG~~~~l~~I~ 225 (494)
.-..+...++..|++++...+-.| |.+.+++.+.+ +..+|+.+ |-+..|..|-..+..
T Consensus 19 ~~~~l~~~l~~~G~~~~~~~~v~D----d~~~I~~~l~~~~~~~dliitt-GG~g~g~~D~t~~~l 79 (135)
T smart00852 19 NGPALAELLTELGIEVTRYVIVPD----DKEAIKEALREALERADLVITT-GGTGPGPDDVTPEAV 79 (135)
T ss_pred cHHHHHHHHHHCCCeEEEEEEeCC----CHHHHHHHHHHHHhCCCEEEEc-CCCCCCCCcCcHHHH
Confidence 344677778889998776655433 34445444432 34445444 545567777665543
No 439
>COG2052 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.06 E-value=1.6e+02 Score=21.65 Aligned_cols=33 Identities=15% Similarity=0.229 Sum_probs=26.0
Q ss_pred eEEEEeeCCCCcccccCHHHHHHHHHHhhcccCCCceEEEeccccc
Q 011057 204 ICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGG 249 (494)
Q Consensus 204 ~~vv~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (494)
++|.+.+|.+. |+++|..-|+.. + .++|+.||-
T Consensus 18 RviaIVsPESa-----PiKRii~eArdr------~--~LIDATYGR 50 (89)
T COG2052 18 RVIAIVSPESA-----PIKRIIQEARDR------G--MLIDATYGR 50 (89)
T ss_pred eEEEEECCCcc-----cHHHHHHHHHhc------C--cEEEcccCc
Confidence 56777777766 899999999887 5 456998875
No 440
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=21.50 E-value=1.8e+02 Score=28.48 Aligned_cols=80 Identities=10% Similarity=0.099 Sum_probs=47.9
Q ss_pred HHHHcCCeeEEEeccCCccccCHHHHHHhhhhCCeEEEE-eeC--CCCcccccCHHHHHHHHHHhhcccCCCceEEEecc
Q 011057 170 FARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAA-ILG--STLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAA 246 (494)
Q Consensus 170 ~~~~~G~~v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~-~~~--~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (494)
.++..|+.++.-+...|.-.+-.++++++...+...|++ |+| .|-..-++.|+.|.+++++.-+.---.+++.+|+.
T Consensus 189 w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~~DvvliDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAt 268 (340)
T COG0552 189 WGERLGVPVISGKEGADPAAVAFDAIQAAKARGIDVVLIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDAT 268 (340)
T ss_pred HHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcCCCEEEEeCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcc
Confidence 456678776654322222235557777777777655444 554 34446678889999998876110000267778998
Q ss_pred ccc
Q 011057 247 SGG 249 (494)
Q Consensus 247 ~~~ 249 (494)
-|-
T Consensus 269 tGq 271 (340)
T COG0552 269 TGQ 271 (340)
T ss_pred cCh
Confidence 774
No 441
>cd06535 CIDE_N_CAD CIDE_N domain of CAD nuclease. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and the release of active DFF40/CAD nuclease.
Probab=21.02 E-value=2.3e+02 Score=21.19 Aligned_cols=50 Identities=18% Similarity=0.109 Sum_probs=34.4
Q ss_pred HHHHHHHHcCCe--eEEEeccCCccccCHHHHHHhhhhCCeEEEEeeCCCCcc
Q 011057 166 CWEKFARYFEVE--LKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNG 216 (494)
Q Consensus 166 s~~~~~~~~G~~--v~~v~~~~~~~~~d~~~L~~~i~~~t~~vv~~~~~~~tG 216 (494)
-..++++.+.+. ...+-+.+|+-.++ |+.-..+.++|..+++.-+..-+|
T Consensus 26 L~~K~~~~l~l~~~~~~l~L~eDGTeVt-EeyF~tLp~nT~lmvL~~gq~W~g 77 (77)
T cd06535 26 LLRKGCRLLQLPCAGSRLCLYEDGTEVT-EEYFPTLPDNTELVLLTPGQSWQG 77 (77)
T ss_pred HHHHHHHHhCCCCCCcEEEEecCCcEeh-HHHHhcCCCCcEEEEEcCCCccCC
Confidence 456677777765 23444455434565 888888999999988887776554
No 442
>PF13656 RNA_pol_L_2: RNA polymerase Rpb3/Rpb11 dimerisation domain; PDB: 2Y0S_L 1I3Q_K 4A3D_K 2JA8_K 3GTP_K 1R9T_K 3PO2_K 4A3J_K 3HOX_K 2JA7_K ....
Probab=20.61 E-value=1.9e+02 Score=21.56 Aligned_cols=31 Identities=13% Similarity=0.185 Sum_probs=19.8
Q ss_pred hcCceeeccccCCCCCCceEEEEEeccCCCh
Q 011057 397 RFGWIVPAYTMPADAQHITVLRVVIREDFSR 427 (494)
Q Consensus 397 ~~Gi~v~~~~~~~~~~~~~~lRvs~~~~~t~ 427 (494)
+.++.+.+|..|--....-.+||-.....++
T Consensus 25 ~p~V~fagY~vpHPl~~~i~l~Iqt~~~~~p 55 (77)
T PF13656_consen 25 DPDVEFAGYRVPHPLENKINLRIQTKGGITP 55 (77)
T ss_dssp STTEEEEEEEESETTSSEEEEEEEESTTS-H
T ss_pred CCCeEEEEeccCCCCCCceEEEEEECCCCCH
Confidence 3466667777664455667789988755444
No 443
>PLN03013 cysteine synthase
Probab=20.20 E-value=3.4e+02 Score=27.84 Aligned_cols=53 Identities=21% Similarity=0.149 Sum_probs=37.0
Q ss_pred eeeecChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeCCCcchHHHHHHHHcCCeeEEEecc
Q 011057 120 GVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS 184 (494)
Q Consensus 120 ~~~t~ggt~a~~~a~~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~ 184 (494)
++-.++|..+.-+|+.+... |. +-.|++|......-.+.++.+|++++.++-+
T Consensus 178 VVeaSSGN~G~ALA~~a~~~---------G~---~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 178 LVEPTSGNTGIGLAFIAASR---------GY---RLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred EEEECCcHHHHHHHHHHHHc---------CC---CEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 45556777777666655532 22 2467888888777788889999999888643
Done!