Query 011059
Match_columns 494
No_of_seqs 221 out of 550
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 07:39:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011059.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011059hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF04188 Mannosyl_trans2: Mann 100.0 2.6E-95 6E-100 773.3 38.2 432 9-494 1-443 (443)
2 KOG2647 Predicted Dolichyl-pho 100.0 7.1E-91 1.5E-95 707.1 30.7 425 4-494 7-444 (444)
3 COG5542 Predicted integral mem 100.0 5.2E-35 1.1E-39 299.2 24.5 327 69-492 71-406 (420)
4 PF13231 PMT_2: Dolichyl-phosp 98.7 1.7E-06 3.7E-11 78.4 17.4 117 94-222 3-127 (159)
5 TIGR03766 conserved hypothetic 98.3 8.8E-05 1.9E-09 80.7 20.9 143 70-223 90-249 (483)
6 PF02366 PMT: Dolichyl-phospha 97.9 0.00068 1.5E-08 66.9 17.8 96 123-218 82-190 (245)
7 TIGR03663 conserved hypothetic 97.4 0.019 4.2E-07 61.9 20.4 133 71-217 25-170 (439)
8 COG1807 ArnT 4-amino-4-deoxy-L 97.3 0.014 3.1E-07 64.1 18.8 151 94-263 65-225 (535)
9 PF09594 DUF2029: Protein of u 97.0 0.059 1.3E-06 52.1 17.6 65 157-221 57-121 (241)
10 PRK13279 arnT 4-amino-4-deoxy- 96.9 0.12 2.5E-06 57.5 20.6 130 71-211 30-181 (552)
11 PLN02816 mannosyltransferase 96.6 0.31 6.6E-06 54.1 21.8 89 133-222 128-226 (546)
12 PLN02841 GPI mannosyltransfera 96.5 0.12 2.6E-06 55.5 16.9 174 10-223 9-183 (440)
13 PF03901 Glyco_transf_22: Alg9 96.4 0.29 6.2E-06 52.2 19.6 173 132-320 90-277 (418)
14 PF09852 DUF2079: Predicted me 96.4 0.077 1.7E-06 57.3 15.2 95 124-218 60-156 (449)
15 PF10131 PTPS_related: 6-pyruv 95.4 1.1 2.5E-05 50.5 19.1 82 128-210 28-119 (616)
16 PF02516 STT3: Oligosaccharyl 95.3 0.47 1E-05 51.2 15.7 135 84-225 61-208 (483)
17 KOG3893 Mannosyltransferase [C 94.9 1.2 2.6E-05 45.9 15.8 90 131-220 103-193 (405)
18 PF06728 PIG-U: GPI transamida 94.9 2.1 4.7E-05 45.4 18.7 96 128-223 85-192 (382)
19 COG1287 Uncharacterized membra 94.5 2 4.3E-05 49.8 18.5 123 85-214 79-216 (773)
20 PF11028 DUF2723: Protein of u 94.1 2 4.4E-05 40.8 14.7 123 89-221 12-163 (178)
21 TIGR03459 crt_membr carotene b 94.1 2.2 4.7E-05 46.4 16.6 96 129-227 172-269 (470)
22 KOG3359 Dolichyl-phosphate-man 94.1 2.6 5.7E-05 47.8 17.5 197 70-271 59-281 (723)
23 COG1928 PMT1 Dolichyl-phosphat 92.4 3.3 7.2E-05 47.0 15.1 197 70-271 48-269 (699)
24 COG4346 Predicted membrane-bou 90.7 4.6 9.9E-05 42.2 12.8 89 134-223 165-254 (438)
25 COG3463 Predicted membrane pro 90.5 3.1 6.6E-05 44.6 11.7 93 126-218 90-184 (458)
26 PF04922 DIE2_ALG10: DIE2/ALG1 90.5 9.8 0.00021 40.5 15.7 71 153-223 91-162 (379)
27 PF05007 Mannosyl_trans: Manno 84.8 4.3 9.2E-05 40.9 8.3 50 174-223 5-54 (259)
28 COG5305 Predicted membrane pro 82.8 73 0.0016 35.7 17.5 86 90-187 94-182 (552)
29 PF03155 Alg6_Alg8: ALG6, ALG8 81.4 25 0.00054 38.5 13.1 100 127-227 105-209 (469)
30 PF05208 ALG3: ALG3 protein; 72.7 84 0.0018 33.4 13.6 71 153-223 104-176 (368)
31 KOG2762 Mannosyltransferase [C 70.5 48 0.001 35.0 11.0 73 153-225 132-206 (429)
32 PF14897 EpsG: EpsG family 67.2 1E+02 0.0022 30.8 12.9 130 73-219 24-157 (330)
33 COG5650 Predicted integral mem 62.1 13 0.00028 41.0 5.2 106 157-272 199-304 (536)
34 KOG2576 Glucosyltransferase - 61.9 62 0.0014 34.7 10.0 101 125-226 103-206 (500)
35 COG5617 Predicted integral mem 51.0 4.7E+02 0.01 30.6 16.0 129 70-219 54-195 (801)
36 PF09586 YfhO: Bacterial membr 49.1 4.9E+02 0.011 30.3 21.7 83 125-207 91-179 (843)
37 PRK13375 pimE mannosyltransfer 47.1 4E+02 0.0086 28.8 13.5 29 191-219 167-195 (409)
38 KOG2642 Alpha-1,2 glucosyltran 44.2 1.3E+02 0.0028 31.9 8.8 69 156-225 116-185 (446)
39 PHA02898 virion envelope prote 33.2 1.7E+02 0.0037 24.7 6.3 66 209-276 9-77 (92)
40 PHA03048 IMV membrane protein; 32.9 1.7E+02 0.0038 24.8 6.3 25 248-274 50-74 (93)
41 KOG2575 Glucosyltransferase - 27.6 8.3E+02 0.018 26.6 12.9 102 122-226 137-243 (510)
42 KOG2552 Major facilitator supe 25.9 6.8E+02 0.015 26.8 10.7 69 154-222 145-214 (388)
43 KOG2292 Oligosaccharyltransfer 21.9 2E+02 0.0044 32.2 6.2 64 131-195 124-190 (751)
No 1
>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=100.00 E-value=2.6e-95 Score=773.26 Aligned_cols=432 Identities=43% Similarity=0.757 Sum_probs=360.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccccHHHHHHHhhcCCCcc
Q 011059 9 ETQVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIAQCGYEYE 88 (494)
Q Consensus 9 ~~~vl~~~i~sR~~~lll~~l~~~~~~~~DtS~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~WDa~~f~~IA~~GY~~e 88 (494)
+++|++.+++||+++++++++++...-|+||+..+.+++.+++. ...++...+.++++.|||++||++||+|||++|
T Consensus 1 ~~~~~~~~~~~r~l~lll~~l~~~~~~~~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~l~rWDa~~F~~IA~~GY~~E 77 (443)
T PF04188_consen 1 RKGVVKFFVLSRILQLLLQILFPGLLFDTSTSLLLDPPCSSAPS---SLIDSFVNRLLWGLVRWDAVYFLRIAEHGYSYE 77 (443)
T ss_pred CCcccccchHHHHHHHHHHHHHhCcCCCCChHhhcCCCcccCCC---cchHhHHHHHHhcccchhHHHHHHHHHhCCCcc
Confidence 35789999999999999999998666667777666665531221 111334567788899999999999999999999
Q ss_pred cccccccchHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchh
Q 011059 89 QSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPAS 168 (494)
Q Consensus 89 ~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~~~~lvs~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pas 168 (494)
|++||||+||.++|.+++....++.+.++.......+|+++||++++++++++|+++++++++++.|.+++++++++||+
T Consensus 78 ~~~AFfPl~P~lvr~~~~~~~~~l~~~l~~~~~l~~~~~~vs~~~~~la~~~L~~l~~~~~~~~~~a~~a~ll~~~~Pas 157 (443)
T PF04188_consen 78 HEWAFFPLYPLLVRLLSKSLLSPLYGLLSVGSALLNSGILVSNVAFLLAAVALYRLTRRVFKSRKLALLAALLFIFSPAS 157 (443)
T ss_pred ccccccCcHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHccHH
Confidence 99999999999999999544444444444445566789999999999999999999999999999999999999999999
Q ss_pred hhhhhhcchHHHHHHHHHHHHHHHhcchHHHHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 011059 169 IFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCG 248 (494)
Q Consensus 169 if~sa~YsEslF~~ls~~gl~~~~~~~~~~a~~~~~lA~~~RsnGil~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 248 (494)
+|++++||||+|++++++|++.+++++++.|++++++|+++||||++++++++++.+...+....++++..+.++.++..
T Consensus 158 iF~sa~YsEslf~~lsf~gl~~~~~~~~~~a~~~~~la~~~RsnGll~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 237 (443)
T PF04188_consen 158 IFLSAPYSESLFALLSFAGLYLLERGRWWLAGLLFALATLTRSNGLLLAGFFAYELLGIYYLDLRQLRRQRRLVRALISA 237 (443)
T ss_pred HHhhcCccHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999998876654333333333456667778
Q ss_pred HHHHHHHHHhHHHHHHhhhhhccCCCCCCCCcccccccCCcchhHHhhhhhcceeeeeccccCccchHhHHHHHHHHHHH
Q 011059 249 ALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWGVGFLRYFQFKQLPNFLLASPMLTLALCS 328 (494)
Q Consensus 249 ~l~~~iv~~P~~~~q~~~Y~~fC~~~~~~~~r~WC~~~~P~~Ys~VQ~~YWnvGFl~y~~~~niPnFLlA~P~l~l~~~~ 328 (494)
+++++++++|++++|+|+|.+||+.++.++.+|||++++|++|+|||+||||||||||||+||||||++|+|++++++++
T Consensus 238 ~l~~~~i~~pf~~~q~~~y~~fC~~~~~~~~~~WC~~~~P~~Ys~vQ~~YWnvGfl~Yw~~~niPnFlla~P~~~l~~~~ 317 (443)
T PF04188_consen 238 ILSGLLIFLPFVLFQYYAYYRFCPPRSFGDEPPWCNNTIPSIYSFVQSHYWNVGFLRYWTLKNIPNFLLALPMLLLSVYS 317 (443)
T ss_pred hhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCchhhhccCccchHHHHHHHHccchHHhccccccchHHHHHHHHHHHHHH
Confidence 88899999999999999999999987553457999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcchhhhhhccccCcCCCCCccccccCCCCCCCCCCCccCCcccccccchhhHhhhhhhcCCCCCCccccCCCC
Q 011059 329 IIHYVKSQPELVYSLGFRASNEGKEYAPVFFSSGAAPKSNSAPVAEKPLSKIHGTQNLRLRKQMQKGGNPALVPVDCGST 408 (494)
Q Consensus 329 ~~~~~~~~p~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (494)
+++|.+++|+.+.++|...+..+++ .++ .
T Consensus 318 ~~~~~~~~~~~~~~~g~~~~~~~~~---------------------------~~~----------~-------------- 346 (443)
T PF04188_consen 318 IWYFFRARPWLFSSLGFTYPSSNKR---------------------------SSK----------I-------------- 346 (443)
T ss_pred HHHHHHhCchhhhccccccCccccc---------------------------ccc----------c--------------
Confidence 9999999999888877653222110 000 0
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHHhhhhhhhhHhhcCChHHHHHHHHhhccc-cccccc--------cceeeeehH--
Q 011059 409 MKSGYLSPAVLPFIFHLGFMAATAFFVMHVQVSTRFLSASPPLYWFASYLIMSP-VMDKRW--------GYLIWTYCA-- 477 (494)
Q Consensus 409 ~~~~~~~~~~~p~v~h~~~l~~~~l~~~HVQI~tR~~S~~P~~YW~~A~~~~~~-~~~~~~--------~~~i~~y~~-- 477 (494)
.+.+++++.++|+++|+++|+++++|+|||||+||++|+||++||++|+.+.+. .+++++ .|..+.|++
T Consensus 347 ~~~~~~~~~~~~~i~~~~~L~~~~~~~~HVQVitR~~s~~P~~YW~~A~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (443)
T PF04188_consen 347 PDVGFLSPRVFPYIVHAAFLLVFALFFMHVQVITRFLSSSPVWYWFLAYLLVKGDDKSKKWKPLGDDRIVKLYVIWMICI 426 (443)
T ss_pred cchhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHhccccccccccccccccchhhhhHhhHHH
Confidence 011355667899999999999999999999999999999999999999999754 122222 244556777
Q ss_pred HHHHHHHHhhcCCCCCC
Q 011059 478 AYILIGSLLFSNFYPFT 494 (494)
Q Consensus 478 ~y~~ig~~Lf~~FlPwT 494 (494)
+|++||++||+||||||
T Consensus 427 ~y~~ig~vLf~~FlPpt 443 (443)
T PF04188_consen 427 SYAVIGTVLFANFLPPT 443 (443)
T ss_pred HHHHHHHHHHhcCCCCC
Confidence 99999999999999998
No 2
>KOG2647 consensus Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase [General function prediction only]
Probab=100.00 E-value=7.1e-91 Score=707.10 Aligned_cols=425 Identities=37% Similarity=0.632 Sum_probs=362.8
Q ss_pred CCCcchHH--HHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccccHHHHHHHh
Q 011059 4 LNFPHETQ--VFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIA 81 (494)
Q Consensus 4 ~~~~~~~~--vl~~~i~sR~~~lll~~l~~~~~~~~DtS~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~WDa~~f~~IA 81 (494)
.+++.+.+ +.+.++.+|+++++++.+++...-|.|+++.+.+|+.++.+ ....++...+.++++.+|||+||++||
T Consensus 7 ~~~~~~~~~~~~~~~~~sRl~v~lLq~i~~~~~~~~~~~~~~n~p~~~~~~--s~~~~~~~~~~l~~l~~WDa~~FL~ia 84 (444)
T KOG2647|consen 7 SRDKSTLEYFVTRYAVFSRLIVLLLQFLANIAAIPDHTSDAFNLPRLSPRQ--SSFEDVVVKRLLGGLLSWDAEYFLFIA 84 (444)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhhcchhccccc--chHHHHHHHHHHhccchhhHHHHHHHH
Confidence 34566666 88999999999999999999655566678788888765432 122245567889999999999999999
Q ss_pred hcCCCcccccccccchHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHH
Q 011059 82 QCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLL 161 (494)
Q Consensus 82 ~~GY~~e~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~~~~lvs~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall 161 (494)
||||.+||++|||||+|..+|.+. .+..++.+.++..+...++|+++|+.++++++..||++++.+++|++.+..|+++
T Consensus 85 e~gy~fEh~~AF~pl~P~~v~~~~-~~~~~~~~~l~~~~~~~i~~~~vn~~~f~la~~~Lyql~~~~~~~~k~s~~a~li 163 (444)
T KOG2647|consen 85 EHGYLFEHELAFFPLFPFVVRLVT-EVLRPIEPVLSLRSILLISAVLVNIFFFMLAAVALYQLTRIILHDPKISFYAALL 163 (444)
T ss_pred hhchHHhhhHHhccccHHHHHHHH-HhcccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHhhhhhe
Confidence 999999999999999999999998 3456777778877888999999999999999999999999999999999999999
Q ss_pred HhhcchhhhhhhhcchHHHHHHHHHHHHHHHhcchHHHHHHHHHhhhcccchhhhHHHHHHHHHHHHHH-HHHhhhhhHH
Q 011059 162 FCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYD-ALFLKKRHFL 240 (494)
Q Consensus 162 ~~~~Pasif~sa~YsEslF~~ls~~gl~~~~~~~~~~a~~~~~lA~~~RsnGil~~~~~~~~~l~~~~~-~~~~~~~~~~ 240 (494)
||+|||+||++++||||+|+++++.|++.+++++...+.+++++++++||||+++++++.+...+..+. ...+.+|...
T Consensus 164 FcfnPAsIF~ts~YSEsLfa~~s~~Gi~~~~~~~~~~~~~~~~l~~~~rSngil~~~~~~~~~~~~~F~~~L~~~~r~~~ 243 (444)
T KOG2647|consen 164 FCFNPASIFLTAGYSESLFALFSFLGILFLEKGRQFTGTLLFSLATLVRSNGILSAGFLMHSQNRGFFIFSLTMLNRLRQ 243 (444)
T ss_pred eEecchHhhhhHHhhHHHHHHHHHHHHHHHhcCCccceehHHHHHHHHHhhhhhhHHHHhhhhcceeeeeehHhhhhHHH
Confidence 999999999999999999999999999999999999999999999999999999999998864432221 1111222223
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHhhhhhccCCCCCCCCcccccccCCcchhHHhhhhhcceeeeeccccCccchHhHHH
Q 011059 241 AMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWGVGFLRYFQFKQLPNFLLASP 320 (494)
Q Consensus 241 ~~~~~~~~~l~~~iv~~P~~~~q~~~Y~~fC~~~~~~~~r~WC~~~~P~~Ys~VQ~~YWnvGFl~y~~~~niPnFLlA~P 320 (494)
..+.++..++.++++.+|+..+|||+|.+||++++..|.+|||..++|.+|+|||+||||||||||||+|||||||+|+|
T Consensus 244 ~~~~i~~~~l~~l~~~~p~~~~qyy~y~~fC~~~~~~e~spwC~~~~p~~Ys~IQ~~YW~VGflkYwt~knIPNFLlalP 323 (444)
T KOG2647|consen 244 LFKQIVSLFLSILTFLLPLAAFQYYGYKLFCPPRTAWEKSPWCFGILPLIYSYIQSHYWNVGFLKYWTLKNIPNFLLALP 323 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCCccccCcccceeeccchHHHHHHhcccceeeecccccCchHHHHhH
Confidence 46677778888999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcchhhhhhccccCcCCCCCccccccCCCCCCCCCCCccCCcccccccchhhHhhhhhhcCCCCCC
Q 011059 321 MLTLALCSIIHYVKSQPELVYSLGFRASNEGKEYAPVFFSSGAAPKSNSAPVAEKPLSKIHGTQNLRLRKQMQKGGNPAL 400 (494)
Q Consensus 321 ~l~l~~~~~~~~~~~~p~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (494)
+++++++++++|.+.+|+.+..+|+.+...+
T Consensus 324 ~iil~~~a~~~y~~~~~~~~~~~~l~~~~~~------------------------------------------------- 354 (444)
T KOG2647|consen 324 VIILVLYALWYYWTTHPWGCLWLNLQASKFN------------------------------------------------- 354 (444)
T ss_pred HHHHHHHHHHHHHhhccccccccccchhhhh-------------------------------------------------
Confidence 9999999999999988887665555431110
Q ss_pred ccccCCCCCCCCCCCcchHHHHHHHHHHHHHHHHhhhhhhhhHhhcCChHHHHHHHHhhcccc----cc------ccccc
Q 011059 401 VPVDCGSTMKSGYLSPAVLPFIFHLGFMAATAFFVMHVQVSTRFLSASPPLYWFASYLIMSPV----MD------KRWGY 470 (494)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~p~v~h~~~l~~~~l~~~HVQI~tR~~S~~P~~YW~~A~~~~~~~----~~------~~~~~ 470 (494)
..+.+|+++|++++++++.|+|||||.||++|++|++||++|+.+.+.. +. ..+.+
T Consensus 355 --------------~~~~fp~~vha~vll~i~~F~mHvQV~tR~lsa~Pl~YW~~A~~~~~~~~~t~~~~~l~~~~~~~~ 420 (444)
T KOG2647|consen 355 --------------TDLSFPFVVHAAVLLLIGCFYMHVQVLTRFLSALPLIYWFLAHLLQKQELKTIKWNPLAEPIMGFL 420 (444)
T ss_pred --------------hhhhhhHHHHHHHHHHHHHhhhhHHHHHHHHhhchHHHHHHHHHhhhccccccccccccCCceEEE
Confidence 0134899999999999999999999999999999999999999986211 11 12445
Q ss_pred eeeeehHHHHHHHHHhhcCCCCCC
Q 011059 471 LIWTYCAAYILIGSLLFSNFYPFT 494 (494)
Q Consensus 471 ~i~~y~~~y~~ig~~Lf~~FlPwT 494 (494)
.++.+|-.|.++|++||+||||||
T Consensus 421 ~vW~~~~~y~llgt~Lfs~flP~t 444 (444)
T KOG2647|consen 421 FVWKTCSTYILLGTLLFSNFLPPT 444 (444)
T ss_pred EehhhhhHHHHHHHHHHhccCCCC
Confidence 566678899999999999999998
No 3
>COG5542 Predicted integral membrane protein [Function unknown]
Probab=100.00 E-value=5.2e-35 Score=299.21 Aligned_cols=327 Identities=20% Similarity=0.309 Sum_probs=234.0
Q ss_pred cccccHHHHHHHhhcCCCcccccccccchHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011059 69 SIVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMI 148 (494)
Q Consensus 69 l~~WDa~~f~~IA~~GY~~e~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~~~~lvs~~~~~~a~~~Ly~L~~~~ 148 (494)
+.+||+...+..-..++.-.|+.+|+|++|.-+|.++.+... -...+++.+.||+++..++..+|+++++.
T Consensus 71 l~~w~af~~~~~~f~~~~k~~~~~~~p~~~y~i~ii~~L~~~---------~~~~l~~~l~s~~~~~~~ay~lY~~tk~~ 141 (420)
T COG5542 71 LVHWYAFIALNGGFVRVLKSHFADYFPLYLYWIRIINKLLSS---------LYFILAIKLFSNIADFVAAYFLYKITKLR 141 (420)
T ss_pred HHHHHHHHHhhhhhhhhhhccccccCchHHHHHHHHHHHHhh---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555555555568899999999999998875311 12478999999999999999999999999
Q ss_pred hCChhHHHHHHHHHhhcchhhhhhhhc--chHHHHHHHHHHHHHHHhcchHHHHHHHHHhhhcccchhhhHHHHHHHHHH
Q 011059 149 LKDPDAALCASLLFCFNPASIFYTSIY--SESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMH 226 (494)
Q Consensus 149 ~~~~~~a~~aall~~~~Pasif~sa~Y--sEslF~~ls~~gl~~~~~~~~~~a~~~~~lA~~~RsnGil~~~~~~~~~l~ 226 (494)
+++.+.|..|..+++++|+++++++.| |||+|+++++.|+|+..+++...|++++++|+++||||++++.++++.+++
T Consensus 142 y~~~~~a~fa~i~~~~~P~~i~~s~iw~~teSlf~ll~~l~iyf~~~k~~~~a~~~faLa~l~Rsngi~~~p~fl~~~ik 221 (420)
T COG5542 142 YGLGSMARFATILVILSPSVIYNSAIWGQTESLFTLLSILAIYFFSIKKQIPALFFFALATLFRSNGIFLSPLFLIPLIK 221 (420)
T ss_pred cccchhhhheEEEEEeccHHHhhhhHHhccchHHHHHHHHHHHHHHccchhHHHHHHHHHHHhccchhHHHHHHHHHHHh
Confidence 988899999999999999999999999 999999999999999999999999999999999999999999999987765
Q ss_pred HHHHHHHhhhhhHH-HHHHHHHHHHHHHHHHHhHHHHHHhhhhhccCCCCCCCCcccccccCCcchhHHhhhhhcceeee
Q 011059 227 QAYDALFLKKRHFL-AMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYWGVGFLR 305 (494)
Q Consensus 227 ~~~~~~~~~~~~~~-~~~~~~~~~l~~~iv~~P~~~~q~~~Y~~fC~~~~~~~~r~WC~~~~P~~Ys~VQ~~YWnvGFl~ 305 (494)
... .+...... ........++...-+..|..--++.+|.+.|.+ =+||++..|++|++||+||||||+.+
T Consensus 222 ~~~---ik~i~~~l~~~~l~~~~ll~~~~~~~~~~~~~~~~y~~~~~~------f~~~~~~~~~iy~~I~~~~w~vg~~~ 292 (420)
T COG5542 222 NRK---IKIIWYLLPSGSLTYLSLLMPAWILGRNAFEIFLGYWRQSNG------FKEQGKNAPNIYSWIPNNYWNVGLPK 292 (420)
T ss_pred hhh---HHHhhhhhhhHHHHHHHHHHHHHHhCccchhhhhhhhccccc------chHHHhcchHHHHhhccceeeeeeeE
Confidence 321 00000000 000011111112222333344444556555543 36999999999999999999999999
Q ss_pred eccccCccchHhHHHHHHHHHHHHHHHHhhcchhhhhhccccCcCCCCCccccccCCCCCCCCCCCccCCcccccccchh
Q 011059 306 YFQFKQLPNFLLASPMLTLALCSIIHYVKSQPELVYSLGFRASNEGKEYAPVFFSSGAAPKSNSAPVAEKPLSKIHGTQN 385 (494)
Q Consensus 306 y~~~~niPnFLlA~P~l~l~~~~~~~~~~~~p~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (494)
||+.+|+|||+.+++.+....++-.++.+.++.
T Consensus 293 ~~~~~~~~~~lf~~l~~~v~g~~~ly~~~~y~s----------------------------------------------- 325 (420)
T COG5542 293 YWISNNIPNFLFILLIIIVVGFSKLYFTKQYLS----------------------------------------------- 325 (420)
T ss_pred EeeccCCccHHHHHHHHHHHhhheeeeehhhhh-----------------------------------------------
Confidence 999999999999999887766655443221110
Q ss_pred hHhhhhhhcCCCCCCccccCCCCCCCCCCCcchHHHHHHHHHHHHHHHHhhhhhhhhHhhcCChHHHHHHHHhhccc--c
Q 011059 386 LRLRKQMQKGGNPALVPVDCGSTMKSGYLSPAVLPFIFHLGFMAATAFFVMHVQVSTRFLSASPPLYWFASYLIMSP--V 463 (494)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~v~h~~~l~~~~l~~~HVQI~tR~~S~~P~~YW~~A~~~~~~--~ 463 (494)
.....+++.+. ......+||+|+.+|+.|++|+.||+.|+....- .
T Consensus 326 ------------------------------~~l~a~i~l~~--~li~i~~mH~~~~~r~vs~~pl~ywyla~k~~~~~s~ 373 (420)
T COG5542 326 ------------------------------HSLAALIVLLR--PLILIVCMHERYLNRAVSFSPLAYWYLAEKRLKAISV 373 (420)
T ss_pred ------------------------------hhHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhhhhh
Confidence 00222332112 1222234999999999999999999999876311 1
Q ss_pred ccc----cccceeeeehHHHHHHHHHhhcCCCC
Q 011059 464 MDK----RWGYLIWTYCAAYILIGSLLFSNFYP 492 (494)
Q Consensus 464 ~~~----~~~~~i~~y~~~y~~ig~~Lf~~FlP 492 (494)
..+ ..-+.+..|.+.+...++++|+-|+|
T Consensus 374 ~~~~~~~ilf~~l~y~i~f~sI~~a~lf~~f~p 406 (420)
T COG5542 374 LLSENPTILFSFLGYWIVFFSIALAILFGFFVP 406 (420)
T ss_pred hhhcCcchhHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 111 11111112455678888899988887
No 4
>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase
Probab=98.67 E-value=1.7e-06 Score=78.35 Aligned_cols=117 Identities=21% Similarity=0.225 Sum_probs=96.6
Q ss_pred ccchHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchhhhhhh
Q 011059 94 LPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTS 173 (494)
Q Consensus 94 fPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~~~~lvs~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pasif~sa 173 (494)
.|+++.+++...... |. ...+.-++|.+++.++.+.+|++.|+.++ ++.+..+++++++.|..+..+.
T Consensus 3 pPl~~~~~~~~~~l~--------G~---~~~~~~~~~~l~~~~~~~~~y~i~r~~~~-~~~a~~~~l~~~~~p~~~~~~~ 70 (159)
T PF13231_consen 3 PPLYFLLLALFFKLF--------GD---SVWALRLFNILFSLLTLLLIYLIARRLFG-RRAALIAALLLALSPMFIFYSA 70 (159)
T ss_pred ChHHHHHHHHHHHHh--------Cc---CHHHHHHHHHHHHHHHHHHHHHHHHHHCC-chHHHHHHHHHHHhHHHHHHHH
Confidence 489999998887753 22 14566788999999999999999999984 8999999999999999988875
Q ss_pred -hcchHHHHHHHHHHHHHHHh----c---chHHHHHHHHHhhhcccchhhhHHHHHH
Q 011059 174 -IYSESLYALFSVGGLYYLMS----G---ALNISVLWLAISGCARSNGVLNAGYFCF 222 (494)
Q Consensus 174 -~YsEslF~~ls~~gl~~~~~----~---~~~~a~~~~~lA~~~RsnGil~~~~~~~ 222 (494)
..+|++..++...+++...+ + .+.+++++.+++..+|+++++..+.++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~k~~~~~~~~~~~~ 127 (159)
T PF13231_consen 71 SARPDMLLLFFFLLALYAFYRYIKSKKWRWWILAGLLLGLAFLTKYTFLLLIPALLL 127 (159)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77799999999998887654 2 2457899999999999999988775444
No 5
>TIGR03766 conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.
Probab=98.26 E-value=8.8e-05 Score=80.74 Aligned_cols=143 Identities=20% Similarity=0.173 Sum_probs=99.0
Q ss_pred ccccHHHHHHHhhcCCCcc--ccccccc---chHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011059 70 IVWDSVYFVRIAQCGYEYE--QSYAFLP---LLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRL 144 (494)
Q Consensus 70 ~~WDa~~f~~IA~~GY~~e--~~~AFfP---l~P~lvr~l~~~~~~~l~~~~~~~~~~~~~~~lvs~~~~~~a~~~Ly~L 144 (494)
..||.....+.|.+|=..+ +-.+.+| ++....+.+.... |.. .....-++|.++..++.+++|++
T Consensus 90 p~~D~~~v~~~A~~~~~~~~~~Y~~~yPnn~g~~l~~~~l~kif--------g~~--~~~~~~llNil~~~~si~liy~i 159 (483)
T TIGR03766 90 IGWDAGAVHTAATKSNESSISNYFSRNPNNLFLLLFMHFLYKLF--------GET--SWLFFDVVNIVLVDLSALILYKA 159 (483)
T ss_pred cCcCHHHHHHHHhcCCCcccCceeeECCchHHHHHHHHHHHHHh--------Ccc--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788888888887532111 1122233 3444455554432 211 23445778888888999999999
Q ss_pred HHHHhCChhHHHHHHHHHhhcchhhhh-hhhcchHHHHHHHHHHHHHHH---hc-----c---hHHHHHHHHHhhhcccc
Q 011059 145 SVMILKDPDAALCASLLFCFNPASIFY-TSIYSESLYALFSVGGLYYLM---SG-----A---LNISVLWLAISGCARSN 212 (494)
Q Consensus 145 ~~~~~~~~~~a~~aall~~~~Pasif~-sa~YsEslF~~ls~~gl~~~~---~~-----~---~~~a~~~~~lA~~~Rsn 212 (494)
+++++ +++.|..+++++++.|+-..+ ..+|||...+++..+++++.. ++ + ..++|++.+++-..|||
T Consensus 160 ~k~lf-~~~~a~~a~~l~~l~~~~~~y~~~~Ysd~~~l~~~~l~l~~~~~~~~~~~~~~~~~~~Il~gillal~~~iKp~ 238 (483)
T TIGR03766 160 VKKVF-NKKKAFVALYLFVLLLALSPYILIPYTDTWVLPFVSLFLFLYTVISKKTDLRKKIALSILLGVLLAIAYFIKPS 238 (483)
T ss_pred HHHHh-CchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999 468899999999988886655 469999999888777755332 21 1 14789999999999999
Q ss_pred hhhhHHHHHHH
Q 011059 213 GVLNAGYFCFQ 223 (494)
Q Consensus 213 Gil~~~~~~~~ 223 (494)
|+...+.++..
T Consensus 239 ~iI~liA~~i~ 249 (483)
T TIGR03766 239 AIIFVIAIFIV 249 (483)
T ss_pred chHHHHHHHHH
Confidence 99987664443
No 6
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane
Probab=97.92 E-value=0.00068 Score=66.85 Aligned_cols=96 Identities=20% Similarity=0.228 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchhhhhh-hhcchHHHHHHHHHHHHHHHhc-------
Q 011059 123 GLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSG------- 194 (494)
Q Consensus 123 ~~~~~lvs~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pasif~s-a~YsEslF~~ls~~gl~~~~~~------- 194 (494)
..+.=++|.+++.++++++|.+.++..++++.|..+++++.++|.-+..+ ..-+|+...++...+++.+.+.
T Consensus 82 ~~~~R~~~~l~~~~~~~l~y~~~~~~~~s~~~al~aa~l~~~~~~~~~~sr~~~~D~~l~~f~~la~~~~~~~~~~~~~~ 161 (245)
T PF02366_consen 82 YWAARLPSALFGALTVPLVYLILRRLFGSRRAALLAALLLALDPSLIVQSRYALLDSILLFFILLAIYCLLRWYRYQPFR 161 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 56667888999999999999999999988999999999999999999887 4779998887777776655433
Q ss_pred -c----hHHHHHHHHHhhhcccchhhhHH
Q 011059 195 -A----LNISVLWLAISGCARSNGVLNAG 218 (494)
Q Consensus 195 -~----~~~a~~~~~lA~~~RsnGil~~~ 218 (494)
+ ..++++..++|.+++.+|++..+
T Consensus 162 ~~~~~~~~l~gi~lGla~~~K~~~~~~~~ 190 (245)
T PF02366_consen 162 RKWWLWLLLAGIALGLAILTKGPGLLLVL 190 (245)
T ss_pred cccHHHHHHHHHHHHHHHHhchhHHHHHH
Confidence 1 24688999999999999987554
No 7
>TIGR03663 conserved hypothetical protein TIGR03663. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.
Probab=97.37 E-value=0.019 Score=61.90 Aligned_cols=133 Identities=18% Similarity=0.213 Sum_probs=91.1
Q ss_pred cccHHHHHHHh----hcC-CCcccccccccchHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011059 71 VWDSVYFVRIA----QCG-YEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLS 145 (494)
Q Consensus 71 ~WDa~~f~~IA----~~G-Y~~e~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~~~~lvs~~~~~~a~~~Ly~L~ 145 (494)
.||-.+|-.++ ++| |.++. ....|+++.++....... |.. ..++-+.+.+++ +++.++|.+.
T Consensus 25 ~~DEa~ya~~a~~ml~~g~~~~~p-~~h~Pll~wl~A~~~~lF--------G~s---e~a~RL~~aL~g-~~v~l~~~~~ 91 (439)
T TIGR03663 25 HHDEAIHASFILKLLETGVYSYDP-AYHGPFLYHITAAVFHLF--------GIS---DATARLLPAVFG-VLLPLTAWLY 91 (439)
T ss_pred CCCchhHHHHHHHHHhcCCCCcCC-CCCCCHHHHHHHHHHHHh--------CCC---HHHHHHHHHHHH-HHHHHHHHHH
Confidence 56655555444 444 34442 223588888887765542 221 345666666677 4466788888
Q ss_pred HHHhCChhHHHHHHHHHhhcchhhhhh-hhcchHHHHHHHHHHHHHHHhc------c-hHHHHHHHHHhhhcccchhhhH
Q 011059 146 VMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSG------A-LNISVLWLAISGCARSNGVLNA 217 (494)
Q Consensus 146 ~~~~~~~~~a~~aall~~~~Pasif~s-a~YsEslF~~ls~~gl~~~~~~------~-~~~a~~~~~lA~~~RsnGil~~ 217 (494)
++.+ +++.+..++++.+++|.-+..+ ..-+|.+..++...+++++.+. + ..++++.++++.+++.++.+..
T Consensus 92 r~~~-~~~~al~AAllla~sp~~~~~sr~~~~D~~l~~f~~lal~~l~r~~~~~~~~~~~lag~~~gLa~ltKg~~~l~~ 170 (439)
T TIGR03663 92 RKRL-GDNEVLWAAVLLAFSPVMVYYSRFMRNDIFVAFFTLLAVGAAFRYLDTGKRRYLFLAASALALAFTSKENAYLII 170 (439)
T ss_pred HHHc-CcHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877 5778999999999999998775 4778888888777777665431 1 3578999999999999877644
No 8
>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]
Probab=97.29 E-value=0.014 Score=64.14 Aligned_cols=151 Identities=20% Similarity=0.170 Sum_probs=98.2
Q ss_pred ccchHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchhhhhh-
Q 011059 94 LPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT- 172 (494)
Q Consensus 94 fPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~~~~lvs~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pasif~s- 172 (494)
-|+...+......++ |. ...+.-+.+++++.+++++.|.++++++++ +.|..|++++...|.-+..+
T Consensus 65 PPl~~Wl~a~~~~lf--------G~---~~~~~rl~~~l~~~~~~~l~y~l~k~l~~~-~~a~~aali~~~~p~~~~~~~ 132 (535)
T COG1807 65 PPLVYWLQALSYLLF--------GV---NEWSARLPSALAGALTALLVYWLAKRLFGR-LAALLAALILLLTPLFFLIGR 132 (535)
T ss_pred CcHHHHHHHHHHHHc--------Cc---chHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHhH
Confidence 466666665444332 31 245667777788888899999999999965 89999999999999998886
Q ss_pred hhcchHHHHHHHHHHHHHH---Hhc--c---hHHHHHHHHHhhhcccchhhhHHH-HHHHHHHHHHHHHHhhhhhHHHHH
Q 011059 173 SIYSESLYALFSVGGLYYL---MSG--A---LNISVLWLAISGCARSNGVLNAGY-FCFQTMHQAYDALFLKKRHFLAMW 243 (494)
Q Consensus 173 a~YsEslF~~ls~~gl~~~---~~~--~---~~~a~~~~~lA~~~RsnGil~~~~-~~~~~l~~~~~~~~~~~~~~~~~~ 243 (494)
..-+++..+++..++++.+ .++ + +++.++..|++.+++.++.+..+. ++..... .+.+......
T Consensus 133 ~~~~D~~l~~f~~la~~~~~~~~~~~~~~~~~l~~gl~lGL~~ltKg~~~~~l~~~~~~~l~~-------~~~~~~~~~~ 205 (535)
T COG1807 133 LALLDAALAFFLTLALALLYLALRARGKLKWLLLLGLALGLGFLTKGPGALLLPLILLLLLLA-------PRLRRLLRDL 205 (535)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH-------HhHHHHHHHH
Confidence 4667777776666666554 332 1 256789999999999988887662 2221111 1111111112
Q ss_pred HHHHHHHHHHHHHHhHHHHH
Q 011059 244 ILVCGALRCICIFAPFISFQ 263 (494)
Q Consensus 244 ~~~~~~l~~~iv~~P~~~~q 263 (494)
+...+.+.++++..|.....
T Consensus 206 ~~~~g~~l~~l~~~pW~~~~ 225 (535)
T COG1807 206 RLWLGLLLGLLPVLPWLLAI 225 (535)
T ss_pred HHHHHHHHHHHHHhhHHHHH
Confidence 34445555667777876643
No 9
>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes. It is likely to be conserved between Mycobacterium species []. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=96.97 E-value=0.059 Score=52.13 Aligned_cols=65 Identities=18% Similarity=0.083 Sum_probs=55.0
Q ss_pred HHHHHHhhcchhhhhhhhcchHHHHHHHHHHHHHHHhcchHHHHHHHHHhhhcccchhhhHHHHH
Q 011059 157 CASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFC 221 (494)
Q Consensus 157 ~aall~~~~Pasif~sa~YsEslF~~ls~~gl~~~~~~~~~~a~~~~~lA~~~RsnGil~~~~~~ 221 (494)
.+..+.++.|.-.-+..+..|.+.+++...+++..+|+|.++||++.++|++++..+++...+++
T Consensus 57 ~~~~~~~~~p~~~~~~~gq~~~l~~~l~~~a~~~~~r~r~~~agv~lgla~~~K~~p~~~l~~ll 121 (241)
T PF09594_consen 57 LALLLLAFPPVLSALGLGQFDLLVAALLLLALLALRRGRPWLAGVLLGLAAAIKLYPALLLPALL 121 (241)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456677777556667899999999999999999999999999999999999999988777553
No 10
>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional
Probab=96.85 E-value=0.12 Score=57.47 Aligned_cols=130 Identities=12% Similarity=0.053 Sum_probs=82.6
Q ss_pred cccHHHHHHHhhc----C-CC-----cccccccccchHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHH
Q 011059 71 VWDSVYFVRIAQC----G-YE-----YEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVY 140 (494)
Q Consensus 71 ~WDa~~f~~IA~~----G-Y~-----~e~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~~~~lvs~~~~~~a~~~ 140 (494)
..|-.+|.+||++ | +- .+.-.-=-|+...++......+ |. ...++-+.|.++..++++.
T Consensus 30 ~~DE~ryA~iareMl~sGdWlvP~~~g~~y~eKPPL~yWl~Als~~LF--------G~---~~~a~RLpsaL~~~lt~ll 98 (552)
T PRK13279 30 QPDETRYAEISREMLASGDWIVPHFLGLRYFEKPIAGYWINSIGQWLF--------GD---NNFGVRFGSVFSTLLSALL 98 (552)
T ss_pred CCchHHHHHHHHHHHHhCCcCccccCCCcCCCCCcHHHHHHHHHHHHc--------CC---CcHHHHHHHHHHHHHHHHH
Confidence 4566677777753 3 11 1111223466666665544432 22 1456677788888899999
Q ss_pred HHHHHHHHhCChhHHHHHHHHHhhcchhhhhh-hhcchHHHHHHHH---HHHHHHHhc-----c---hHHHHHHHHHhhh
Q 011059 141 FYRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSV---GGLYYLMSG-----A---LNISVLWLAISGC 208 (494)
Q Consensus 141 Ly~L~~~~~~~~~~a~~aall~~~~Pasif~s-a~YsEslF~~ls~---~gl~~~~~~-----~---~~~a~~~~~lA~~ 208 (494)
.|.++++.+++++.|..|++++..+|.-...+ ..-.+++.+++.. .+++...+. + +.+.|+..|++.+
T Consensus 99 vy~larrl~~~r~~AllAaLIlls~~~v~~~g~~a~~D~~l~~fi~lal~~f~~~~~~~~~~~~~~~~lllGla~Glg~L 178 (552)
T PRK13279 99 VYWLALRLWRDRRTALLAALIYLSLFLVYGIGTYAVLDPMITLWLTAAMCSFWLALQAQTRRGKIGGYLLLGLACGMGFM 178 (552)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHH
Confidence 99999999988999999999998887644332 2334776555444 345444331 1 3466788899999
Q ss_pred ccc
Q 011059 209 ARS 211 (494)
Q Consensus 209 ~Rs 211 (494)
++.
T Consensus 179 TKG 181 (552)
T PRK13279 179 TKG 181 (552)
T ss_pred hcc
Confidence 995
No 11
>PLN02816 mannosyltransferase
Probab=96.64 E-value=0.31 Score=54.15 Aligned_cols=89 Identities=18% Similarity=0.223 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchhhhh-hhhcchHHHHHHHHHHHHHHH---------hcchHHHHHH
Q 011059 133 AFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFY-TSIYSESLYALFSVGGLYYLM---------SGALNISVLW 202 (494)
Q Consensus 133 ~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pasif~-sa~YsEslF~~ls~~gl~~~~---------~~~~~~a~~~ 202 (494)
...++-..+|++.++.++ ++.|..+.++-+.++...++ +-.+|.++-+.++..|++..- ..+.-.+-.+
T Consensus 128 ~sal~D~~l~kl~~~~~g-~~~A~~~L~~sl~swf~~y~~sRTfSNslEt~Lt~lAL~~w~~~~~~~~~~~~~~~~~L~l 206 (546)
T PLN02816 128 FSAIGDLYLYKLSDALYG-GNVATWSLFCQMANWFIFFCLNRTFSNCLETVLTIMGLYYWPCIRDSSIDYPVNRKWGLVI 206 (546)
T ss_pred HHHHHHHHHHHHHHHHcC-chHHHHHHHHHHHHHHHHHhhCccchhHHHHHHHHHHHHHhhccccccccccchhhHHHHH
Confidence 334455678888888874 56777777667778877766 679999999999999987642 1122234456
Q ss_pred HHHhhhcccchhhhHHHHHH
Q 011059 203 LAISGCARSNGVLNAGYFCF 222 (494)
Q Consensus 203 ~~lA~~~RsnGil~~~~~~~ 222 (494)
.++|++.|++.++...+++.
T Consensus 207 a~la~~iRPt~ailwl~l~l 226 (546)
T PLN02816 207 AALACAIRPTSAVIWLYVGM 226 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 66888889988877666543
No 12
>PLN02841 GPI mannosyltransferase
Probab=96.50 E-value=0.12 Score=55.48 Aligned_cols=174 Identities=16% Similarity=0.201 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccccHHHHHHHhhcCCCccc
Q 011059 10 TQVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIAQCGYEYEQ 89 (494)
Q Consensus 10 ~~vl~~~i~sR~~~lll~~l~~~~~~~~DtS~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~WDa~~f~~IA~~GY~~e~ 89 (494)
+.++.++++.|++.+..... .|...+..- +| .+...-.||.++..--..-|+ -+
T Consensus 9 ~~vll~a~~lRl~L~~yg~~-------~D~~~eVsy----td--------------idY~vftDga~lv~~G~SPY~-r~ 62 (440)
T PLN02841 9 RSLLLASALLRVALIVYGEW-------QDAHMEVRY----TD--------------VDYLVFSDAAALVASGKSPFA-RD 62 (440)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------hccCccccc----cc--------------cchHHHHHHHHHHHcCCCCCC-CC
Confidence 67888888899988884322 233222211 11 122245799988766555554 25
Q ss_pred ccccccchHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchhh
Q 011059 90 SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI 169 (494)
Q Consensus 90 ~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~~~~lvs~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pasi 169 (494)
+.-.-|++-.++ +.... . + ..-|=++=.++=+++++.++++.+..-.+++.+...+.++.+||..+
T Consensus 63 TYrytPLLa~Ll--lPn~~---~----~-----~~fgk~LF~l~Dll~a~ll~~il~~~~~~~~~~~~~a~~wL~NPlti 128 (440)
T PLN02841 63 TYRYSPLLALLL--VPNSL---L----H-----RSWGKFLFSAADLLVGLFIHTILRLRGVPEKVCTWSVMVWLFNPFTF 128 (440)
T ss_pred CCCcChHHHHHH--cchhh---h----h-----hhHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHhCcHHH
Confidence 566677766555 11110 0 0 01111222245566778888877544323445566788999999999
Q ss_pred hhh-hhcchHHHHHHHHHHHHHHHhcchHHHHHHHHHhhhcccchhhhHHHHHHH
Q 011059 170 FYT-SIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQ 223 (494)
Q Consensus 170 f~s-a~YsEslF~~ls~~gl~~~~~~~~~~a~~~~~lA~~~RsnGil~~~~~~~~ 223 (494)
-.+ .+=+|++-.++..+.++.+.+++...||++.|+|+-.|---+..+.+++..
T Consensus 129 ~istrGSse~i~~~lvl~~L~~l~~g~~~~Aa~~lglavhfkiYPiIy~~Pi~l~ 183 (440)
T PLN02841 129 TIGTRGNCEPIVCAVILWILICLMNGRLLQAAFWYGLVVHFRIYPIIYALPIILV 183 (440)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 775 699999999999999999999999999999999999998888888776554
No 13
>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2.4.1.- from EC [, ]. At least some members are localised in endoplasmic reticulum and involved in GPI anchor biosynthesis [, ]. In yeast the SMP3 (YOR149C) has been implemented in plasmid stability [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0006506 GPI anchor biosynthetic process, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=96.43 E-value=0.29 Score=52.20 Aligned_cols=173 Identities=20% Similarity=0.280 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchhhhhh-hhcchHHHHHHHHHHHHHHHh------------cchHH
Q 011059 132 VAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMS------------GALNI 198 (494)
Q Consensus 132 ~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pasif~s-a~YsEslF~~ls~~gl~~~~~------------~~~~~ 198 (494)
+....+-..+|++.++.. +++.|..+.++.++++...+++ -..+|++-+.+...+++...+ +....
T Consensus 90 ~~s~~~d~~~~~~~~~~~-~~~~a~~~l~l~~~s~~~~~~~~Rtlsns~e~~l~~~al~~~~~~~~~~~~~~~~~~~~~~ 168 (418)
T PF03901_consen 90 LLSALSDYYLYRLVKRLF-GSSVALWALLLSLFSWFMFYYSSRTLSNSFETILVLLALYLWLRSLSRSNSSSSSKRYLLA 168 (418)
T ss_pred HHHHHHHHHHHHHHHHHh-CCchhhhhhhHHHhhhHHHHhhcccCccHHHHHHHHHHHHHHHHhhccCCCcccccchHHH
Confidence 344556667888777777 4678888999999999888775 599999999999999988864 22356
Q ss_pred HHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHhhhhhccCCCCCCC
Q 011059 199 SVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDE 278 (494)
Q Consensus 199 a~~~~~lA~~~RsnGil~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~iv~~P~~~~q~~~Y~~fC~~~~~~~ 278 (494)
.+++.+++...|++.++..++++...+.+.. ++++.....+.+..+++.++.+++..+.-=.+-|.++.-
T Consensus 169 ~~~l~~~~~~~Rpt~~~~~~pl~l~~l~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~i~iDs~~yg~~~~------ 238 (418)
T PF03901_consen 169 IGLLAGLAVFFRPTSALFWLPLGLYLLWRLI----GRRWKSFLFLLILIGLLSALLVLAISILIDSYFYGKWVF------ 238 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccc------
Confidence 7778889999999999888887655442221 111111000112222222233333333333334433332
Q ss_pred CcccccccCCcchhHH--hhhhhcceeeeeccccCccchHhHHH
Q 011059 279 MRPWCKAKVPLLYNFI--QSHYWGVGFLRYFQFKQLPNFLLASP 320 (494)
Q Consensus 279 ~r~WC~~~~P~~Ys~V--Q~~YWnvGFl~y~~~~niPnFLlA~P 320 (494)
+||=. ..|+-+ +++.||+--.-+|=.+++|+...+..
T Consensus 239 -~~~n~----~~~Nv~~~~s~~yG~~p~~~Y~~~~lp~~~~~~~ 277 (418)
T PF03901_consen 239 -PPWNF----FKFNVLEGNSSFYGTHPWHWYFTQGLPNLLGPFL 277 (418)
T ss_pred -chhhh----eeeeecCCchhhhhhcceEEEEeecchhHhHHHH
Confidence 12211 123333 24566666555665778999776553
No 14
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=96.41 E-value=0.077 Score=57.34 Aligned_cols=95 Identities=19% Similarity=0.210 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchhhhhh--hhcchHHHHHHHHHHHHHHHhcchHHHHH
Q 011059 124 LAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT--SIYSESLYALFSVGGLYYLMSGALNISVL 201 (494)
Q Consensus 124 ~~~~lvs~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pasif~s--a~YsEslF~~ls~~gl~~~~~~~~~~a~~ 201 (494)
..-.++..++..++++.+|++.++...+++.|...++++.++|+-.--. --..|.++.-+.++++++++++|+..+.+
T Consensus 60 ~tLli~Qal~la~~~~pl~~lar~~~~~~~~a~~~~~~ylL~p~~~~~~~~dFH~~~~avPll~~~~~~~~~~r~~~~~~ 139 (449)
T PF09852_consen 60 LTLLIVQALLLALGAIPLYRLARRRLLSRRLALLIALAYLLSPGLQGANLFDFHPVAFAVPLLLWALYALERRRWRLFIL 139 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhHHHHhhhhCCCcHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 4455666777788899999999999878999999999999999876542 24556666678888888999999999999
Q ss_pred HHHHhhhcccchhhhHH
Q 011059 202 WLAISGCARSNGVLNAG 218 (494)
Q Consensus 202 ~~~lA~~~RsnGil~~~ 218 (494)
+..++.++|..--+.++
T Consensus 140 ~~ll~llvKEd~~l~v~ 156 (449)
T PF09852_consen 140 WALLLLLVKEDLGLTVA 156 (449)
T ss_pred HHHHHHHHHhhHHHHHH
Confidence 99999999975444333
No 15
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=95.36 E-value=1.1 Score=50.48 Aligned_cols=82 Identities=20% Similarity=0.310 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchhh---hhhhhcchHHHHH---HHHHHHHHHHhcc----hH
Q 011059 128 IVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI---FYTSIYSESLYAL---FSVGGLYYLMSGA----LN 197 (494)
Q Consensus 128 lvs~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pasi---f~sa~YsEslF~~---ls~~gl~~~~~~~----~~ 197 (494)
++--+++++.++..|++.|+..+ +..|..+++++.++|.-. +....++|.+... +.+++++.+.+++ +.
T Consensus 28 l~~~L~~~l~~~~~Y~~~R~~~~-~~~A~l~aiLyl~~py~l~~~y~rgni~e~lA~~llPlvll~~~~~~~~~~~r~~~ 106 (616)
T PF10131_consen 28 LFIFLAFFLGGLGMYFLGRRLGR-RKAAILAAILYLFSPYHLRNIYWRGNIPETLAFALLPLVLLFLYRFIKKRKYRYWI 106 (616)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCchhHH
Confidence 33445667778889999998775 889999999999999655 3457899996433 3344444333222 34
Q ss_pred HHHHHHHHhhhcc
Q 011059 198 ISVLWLAISGCAR 210 (494)
Q Consensus 198 ~a~~~~~lA~~~R 210 (494)
..++.+++..++.
T Consensus 107 ~lAl~~all~lsH 119 (616)
T PF10131_consen 107 LLALSMALLALSH 119 (616)
T ss_pred HHHHHHHHHHHHh
Confidence 5567777777776
No 16
>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells. A lipid-linked core-oligosaccharide is assembled at the membrane of the endoplasmic reticulum and transferred to selected asparagine residues of nascent polypeptide chains by the oligosaccharyl transferase (OTase) complex []. This family consists of the oligsacharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosccharyl transferase (OTase) complex of proteins and is required for its activity [].; GO: 0004576 oligosaccharyl transferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 3AAG_B 2ZAI_D 2ZAG_A 3RCE_A.
Probab=95.34 E-value=0.47 Score=51.21 Aligned_cols=135 Identities=17% Similarity=0.190 Sum_probs=72.2
Q ss_pred CCCcccccccccchHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHh
Q 011059 84 GYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFC 163 (494)
Q Consensus 84 GY~~e~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~~~~lvs~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~ 163 (494)
.|.+-.+.-+.|++|.+.-.+...+. .. +.. ....++..+--+...+.++..|.++++. +|++.|..|+++.+
T Consensus 61 ~yP~G~~i~~~pl~~~l~~~~~~~~~-~~----~~~-~l~~v~~~~ppvl~~L~vi~~y~~~~~~-~~~~~Gl~aA~l~a 133 (483)
T PF02516_consen 61 WYPWGRPIDWPPLFPYLTAAFYAILG-GF----GPV-SLYEVAFWLPPVLGALTVIPVYLLGRRL-GGRKAGLLAAFLLA 133 (483)
T ss_dssp ---TTS---TT-HHHHHHHHHHHS-S-S-----HH-----HHHHHHHHHHGGGGHHHHHHHHHHT-T-HHHHHHHHHHHT
T ss_pred cCCCCCccCcccHHHHHHHHHHHHHH-Hh----cch-hHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCchHHHHHHHHH
Confidence 45544455678999999766665431 11 111 1223334444556666778899999655 58999999999999
Q ss_pred hcchhhhhh-hhcc-----hHHHHHHHHHHHHHHHhcch------HHHHHHHHHhhhcccch-hhhHHHHHHHHH
Q 011059 164 FNPASIFYT-SIYS-----ESLYALFSVGGLYYLMSGAL------NISVLWLAISGCARSNG-VLNAGYFCFQTM 225 (494)
Q Consensus 164 ~~Pasif~s-a~Ys-----EslF~~ls~~gl~~~~~~~~------~~a~~~~~lA~~~RsnG-il~~~~~~~~~l 225 (494)
+.|+-+.=| ++|. |.+|.++++..+....+++. .++|+..++...+=..+ ++..+++....+
T Consensus 134 ~~p~~l~RT~~G~~D~~~~~~~f~~l~~~~~~~a~~~~~~~~~~~~laGl~~~l~~~~W~g~~~~~~~~~~~~~~ 208 (483)
T PF02516_consen 134 ISPGYLSRTMAGFYDHHMLELFFPLLIIYFFLLALKSAKRPLIYAVLAGLALGLYALAWGGYQVFLLIFILLFVI 208 (483)
T ss_dssp TSHHHHHTSSTT--SGGGGTTHHHHHHHHHHHHHHHH------THHHHHHHHHHHHHHHS-GGHHHHHHHHHHHH
T ss_pred HhHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 999933323 3442 45666665555443333332 25666666666666666 555555444433
No 17
>KOG3893 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=94.93 E-value=1.2 Score=45.93 Aligned_cols=90 Identities=18% Similarity=0.179 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchhhhhhh-hcchHHHHHHHHHHHHHHHhcchHHHHHHHHHhhhc
Q 011059 131 NVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTS-IYSESLYALFSVGGLYYLMSGALNISVLWLAISGCA 209 (494)
Q Consensus 131 ~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pasif~sa-~YsEslF~~ls~~gl~~~~~~~~~~a~~~~~lA~~~ 209 (494)
.++-++.+.++|||....--+++.|...+..+..||.....|+ +-.||.-+++++..++++.|+++..||+.-|+|.-.
T Consensus 103 ~~~Dll~a~L~~kLl~~~~i~~~~a~~~~~fWLlNPl~aiIStRGNaesi~~~lvi~~lyllqK~~v~~A~l~~GlaIh~ 182 (405)
T KOG3893|consen 103 AIFDLLIATLIYKLLHMRSISRKQALIYASFWLLNPLTAIISTRGNAESIVAFLVILTLYLLQKSEVFLAGLAHGLAIHL 182 (405)
T ss_pred HHHHHHHHHHHHHHHhhhhcchhhhhHhhhhhhcCchheeeecCCchHHHHHHHHHHHHHHHHHhHHHHHHHHhhheeee
Confidence 3566778889999876322257889999999999999887764 999999999999999999999999999999999988
Q ss_pred ccchhhhHHHH
Q 011059 210 RSNGVLNAGYF 220 (494)
Q Consensus 210 RsnGil~~~~~ 220 (494)
|---+..+..+
T Consensus 183 KIYPliY~l~i 193 (405)
T KOG3893|consen 183 KIYPLIYSLAI 193 (405)
T ss_pred EechHHhhhhh
Confidence 87666655543
No 18
>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI [].; GO: 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=94.90 E-value=2.1 Score=45.38 Aligned_cols=96 Identities=19% Similarity=0.286 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-----------hhHHHHHHHHHhhcchhhhhhh-hcchHHHHHHHHHHHHHHHhcc
Q 011059 128 IVSNVAFLFAAVYFYRLSVMILKD-----------PDAALCASLLFCFNPASIFYTS-IYSESLYALFSVGGLYYLMSGA 195 (494)
Q Consensus 128 lvs~~~~~~a~~~Ly~L~~~~~~~-----------~~~a~~aall~~~~Pasif~sa-~YsEslF~~ls~~gl~~~~~~~ 195 (494)
++-.++-+++++.+++..+..-++ +..+...+.+|.+||-++.-.. .=|.++..++....++...+++
T Consensus 85 llf~~~Dl~~A~~L~~i~~~~~~~~~~~~~~~~~~~~~~~lv~~~YLfNP~tIlscva~ST~~f~nl~i~~sl~~a~~g~ 164 (382)
T PF06728_consen 85 LLFILVDLLIAWLLYRIAKSYQKQESKRQKSPNEKSSSPWLVAAFYLFNPLTILSCVALSTTVFTNLFILLSLYFAVKGN 164 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCchhcccchHHHHHHHHHCHHHHHHHHhcccHHHHHHHHHHHHHHHHcCC
Confidence 344567778889999987544321 1466788999999999998754 4566666777788888888999
Q ss_pred hHHHHHHHHHhhhcccchhhhHHHHHHH
Q 011059 196 LNISVLWLAISGCARSNGVLNAGYFCFQ 223 (494)
Q Consensus 196 ~~~a~~~~~lA~~~RsnGil~~~~~~~~ 223 (494)
...|+++.++|+..+...+++..+++..
T Consensus 165 ~~~s~i~lAlatylSlYpi~Ll~Plll~ 192 (382)
T PF06728_consen 165 VFLSAISLALATYLSLYPILLLPPLLLL 192 (382)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 9999999999999999999988887643
No 19
>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]
Probab=94.49 E-value=2 Score=49.82 Aligned_cols=123 Identities=20% Similarity=0.200 Sum_probs=82.3
Q ss_pred CCcccccccccchHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhh
Q 011059 85 YEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCF 164 (494)
Q Consensus 85 Y~~e~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~~~~lvs~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~ 164 (494)
|.+-...-|-|+++.++...+..+... .+ .....++...-.+...++.+..|.+++++. +++.+..++++..+
T Consensus 79 YP~G~~i~~~pl~~~l~~~~~~~~~~~----~~--~~~~~~~~~~PailG~L~vI~vYl~~r~i~-~~~~g~~aa~ll~~ 151 (773)
T COG1287 79 YPPGSPIDFPPLFLYLTAALGLILGSI----FP--VSLETAALLFPAILGVLTVIPVYLLGRRIL-GDKTGLLAALLLAL 151 (773)
T ss_pred CCCCCCCCCCchHHHHHHHHHHHHHcc----Cc--hHHHHHHHHhhHHHhhHHHHHHHHHHHHHh-cchhhHHHHHHHHH
Confidence 444444559999999999887654211 12 123566666777788889999999999998 67899999999999
Q ss_pred cchhhhhhh-hc-----chHHHHHHHHHHHHHHHh------cch---HHHHHHHHHhhhcccchh
Q 011059 165 NPASIFYTS-IY-----SESLYALFSVGGLYYLMS------GAL---NISVLWLAISGCARSNGV 214 (494)
Q Consensus 165 ~Pasif~sa-~Y-----sEslF~~ls~~gl~~~~~------~~~---~~a~~~~~lA~~~RsnGi 214 (494)
.|+-+.=|. .+ .|.++..+++.++....+ ++. .+||+..++..++=+..-
T Consensus 152 ~p~~~~rt~~G~~d~~~~~~~~~~~~l~~~~~aL~~~~~~~~~~~~~~lag~~~~l~~~sW~g~~ 216 (773)
T COG1287 152 APGYLSRTVAGFYDTDMFELLLPLFALFFFLLALKAAKKLKKPVIYALLAGLALGLLALAWGGYY 216 (773)
T ss_pred hhHHHHHhhcCccCCCchHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHHHHhCcHH
Confidence 999332232 22 355676666666655544 222 356667777766655533
No 20
>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria. The function is not known.
Probab=94.14 E-value=2 Score=40.83 Aligned_cols=123 Identities=16% Similarity=0.216 Sum_probs=70.3
Q ss_pred cccccccchHHHH---HHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------h
Q 011059 89 QSYAFLPLLPAFT---HLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKD-------------P 152 (494)
Q Consensus 89 ~~~AFfPl~P~lv---r~l~~~~~~~l~~~~~~~~~~~~~~~lvs~~~~~~a~~~Ly~L~~~~~~~-------------~ 152 (494)
-..+--||||+-+ |.++. + +..+. .....=++|.+++.+++..+|....+..++ .
T Consensus 12 LgV~HPPGyPlf~llg~lf~~-----l-p~~~~---ia~~vNl~Sal~sA~tv~~l~~~~~~l~~~~~~~~~~~~~~~~~ 82 (178)
T PF11028_consen 12 LGVPHPPGYPLFTLLGRLFSL-----L-PDFGN---IAWRVNLLSALSSALTVLFLFWSITRLLRKLPEEPSTAQTIAIL 82 (178)
T ss_pred cCCCCCCCcHHHHHHHHHHHH-----c-CCcch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 3556678888654 33222 1 10111 233334677788888888889888777644 2
Q ss_pred hHHHHHHHHHhhcchhhhhhhhcchH-----HHHHHHHHHHHHHHhc-------ch-HHHHHHHHHhhhcccchhhhHHH
Q 011059 153 DAALCASLLFCFNPASIFYTSIYSES-----LYALFSVGGLYYLMSG-------AL-NISVLWLAISGCARSNGVLNAGY 219 (494)
Q Consensus 153 ~~a~~aall~~~~Pasif~sa~YsEs-----lF~~ls~~gl~~~~~~-------~~-~~a~~~~~lA~~~RsnGil~~~~ 219 (494)
..+..+++.|.++|.- .+++.=.|- +|..+.++.++..+++ || .+.+.+.|++....-..++....
T Consensus 83 ~a~lv~al~fafS~sf-W~~Av~aEVYal~~l~~al~~~l~l~w~~~~~~~~~~r~l~l~afl~GLs~g~H~~~ll~lP~ 161 (178)
T PF11028_consen 83 GAGLVGALAFAFSDSF-WFQAVEAEVYALSSLFTALLLWLLLKWEREADEPRSDRWLLLIAFLCGLSLGVHLLNLLALPA 161 (178)
T ss_pred HHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788888888754 444444442 3344444444433332 23 35666778887776666655544
Q ss_pred HH
Q 011059 220 FC 221 (494)
Q Consensus 220 ~~ 221 (494)
+.
T Consensus 162 ~~ 163 (178)
T PF11028_consen 162 IA 163 (178)
T ss_pred HH
Confidence 43
No 21
>TIGR03459 crt_membr carotene biosynthesis associated membrane protein. This model represents a family of hydrophobic and presumed membrane proteins. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).
Probab=94.13 E-value=2.2 Score=46.39 Aligned_cols=96 Identities=11% Similarity=0.133 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchhhhhh--hhcchHHHHHHHHHHHHHHHhcchHHHHHHHHHh
Q 011059 129 VSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT--SIYSESLYALFSVGGLYYLMSGALNISVLWLAIS 206 (494)
Q Consensus 129 vs~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pasif~s--a~YsEslF~~ls~~gl~~~~~~~~~~a~~~~~lA 206 (494)
++.+..++.++.+-||.++.-.+++ .+..+...||--++.- ..-.|++...|...|+++..|+++..++++.++|
T Consensus 172 ~~l~g~~l~~w~~~rLar~~g~~~~---~AlWL~~~NPLviihlvgg~HnealM~gl~l~gl~~~~r~~~~~g~vli~~a 248 (470)
T TIGR03459 172 LSLPGLAVMVWAVPKLATHLGGNPT---VALWLGVLNPLVVIHLIGGMHNEMLMVGLVSAGILLALKRRPVAGIALIAVA 248 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHH---HHHHHHHcCchhhhhhhcchhHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 3444455566667777776654543 3455677899998653 5899999999999999999999999999999999
Q ss_pred hhcccchhhhHHHHHHHHHHH
Q 011059 207 GCARSNGVLNAGYFCFQTMHQ 227 (494)
Q Consensus 207 ~~~RsnGil~~~~~~~~~l~~ 227 (494)
..+..++++..+|+.+..+.+
T Consensus 249 ~~VK~~a~l~Lpf~~~~~~~~ 269 (470)
T TIGR03459 249 VALKATAGIALPFVVWIWVAH 269 (470)
T ss_pred HHHhHHHHHHHHHHHHHHHHH
Confidence 999999999998887655543
No 22
>KOG3359 consensus Dolichyl-phosphate-mannose:protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.06 E-value=2.6 Score=47.84 Aligned_cols=197 Identities=16% Similarity=0.149 Sum_probs=120.9
Q ss_pred ccccHHHHHHHhh----cCCCcccccccccchHHHHHHHHHhhhc--ccc-cccc---hhhhHHHHHHHHHHHHHHHHHH
Q 011059 70 IVWDSVYFVRIAQ----CGYEYEQSYAFLPLLPAFTHLLSRSVLA--PLI-GVIG---YRAVLGLAGYIVSNVAFLFAAV 139 (494)
Q Consensus 70 ~~WDa~~f~~IA~----~GY~~e~~~AFfPl~P~lvr~l~~~~~~--~l~-~~~~---~~~~~~~~~~lvs~~~~~~a~~ 139 (494)
.-||-.||-+-+. |-|.+| .- -|+--+++...+.+... .++ ...| .........-..+..++.+.+-
T Consensus 59 VVwDE~HfGkf~S~Yl~~~ff~D--vH-PPlgKmL~al~g~L~GydG~f~f~~~g~~~~~~~~y~~mR~f~a~lgsl~vp 135 (723)
T KOG3359|consen 59 VVWDEAHFGKFASYYLNNIFFFD--VH-PPLGKMLIALVGYLAGYDGSFDFQSIGEYYPNGVPYVGMRLFSALLGSLTVP 135 (723)
T ss_pred EEEecccccchHHHHhcCceeec--cC-chHHHHHHHHHHHHhCCCCCccccCCCccCCCCCchHhHHHHHHHHHhHHHH
Confidence 6899999987774 222222 11 56655666555543210 000 0011 0011245555677777888888
Q ss_pred HHHHHHHHHhCChhHHHHHHHHHhhcchhhhhh-hhcchHHHHHHHHHHHHHHHhc-----c-----h----HHHHHHHH
Q 011059 140 YFYRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSG-----A-----L----NISVLWLA 204 (494)
Q Consensus 140 ~Ly~L~~~~~~~~~~a~~aall~~~~Pasif~s-a~YsEslF~~ls~~gl~~~~~~-----~-----~----~~a~~~~~ 204 (494)
++|...++.-.+...|.++++++++==+=+.++ -.--||+..++..++++.+.|- + | .+.|+..+
T Consensus 136 ~~y~t~~~~~~s~~aa~l~allv~~dns~~T~sr~ILLDs~Llff~~~~~y~~~r~~~~~~~pfs~~W~~wL~~tGvsLg 215 (723)
T KOG3359|consen 136 LAYLTLKELGFSRLAAALAALLVLFDNSLVTLSRFILLDSMLLFFMAAAVYCFVRFYTQRKRPFSLRWWKWLLLTGVSLG 215 (723)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhhcccchhhhhHHHHhHHHHHHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhh
Confidence 899988887777778888888888776666554 3667888888888888776541 1 2 25788999
Q ss_pred HhhhcccchhhhHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHhHHHHHHhhhhhcc
Q 011059 205 ISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHF-LAMWILVCGALRCICIFAPFISFQVYGYFNMC 271 (494)
Q Consensus 205 lA~~~RsnGil~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~l~~~iv~~P~~~~q~~~Y~~fC 271 (494)
.|..+.=.|++..+.+...+..+++.-.-..+... ..+++++.-+ ..++++|+.++-..=|..|-
T Consensus 216 caiSvK~vGlft~~~Vgl~~v~~LW~Ll~D~~~s~~~~~kh~~ar~--~~LI~iP~~iYl~~F~vHf~ 281 (723)
T KOG3359|consen 216 CAISVKYVGLFTIALVGLYTVRELWCLLGDLGLSIKQIVKHLLARL--FFLIGIPFLIYLLFFYVHFS 281 (723)
T ss_pred heeehhhhhHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888777666665553221111111 1233433332 25677899887655555554
No 23
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=92.43 E-value=3.3 Score=46.95 Aligned_cols=197 Identities=17% Similarity=0.191 Sum_probs=111.9
Q ss_pred ccccHHHHHHHhhcCCCccccccc----ccchHHHHHHHHHhhh--ccccc-ccc---hh-hhHHHHHHHHHHHHHHHHH
Q 011059 70 IVWDSVYFVRIAQCGYEYEQSYAF----LPLLPAFTHLLSRSVL--APLIG-VIG---YR-AVLGLAGYIVSNVAFLFAA 138 (494)
Q Consensus 70 ~~WDa~~f~~IA~~GY~~e~~~AF----fPl~P~lvr~l~~~~~--~~l~~-~~~---~~-~~~~~~~~lvs~~~~~~a~ 138 (494)
.-||..||-+-|.+ |-++--| .|+--+++...+.+.. ++++- ..| .+ ......--..|.+.+.+..
T Consensus 48 VVfdE~hfgkFaS~---Yl~~~~~fDvHPPL~kml~al~~~L~g~~g~f~f~~~g~~~~~~~~~y~~mR~f~A~lgsl~v 124 (699)
T COG1928 48 VVFDEAHFGKFASY---YLNGTPFFDVHPPLGKMLIALVGGLEGYDPPFDFQLIGLTEYPFGYNYVGMRFFNALLGSLTV 124 (699)
T ss_pred EEEeeeeeccchHH---hhcCCcccccCCcHHHHHHHhhhhhhccCCCcccccCCcccccCCCChHHHHHHHHHHHhHHH
Confidence 68999999888752 1122233 4444444443333210 11100 000 00 0123455567777788888
Q ss_pred HHHHHHHHHHhCChhHHHHHHHHHhhcchhhhhh-hhcchHHHHHHHHHHHHHHHh--------cch----HHHHHHHHH
Q 011059 139 VYFYRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMS--------GAL----NISVLWLAI 205 (494)
Q Consensus 139 ~~Ly~L~~~~~~~~~~a~~aall~~~~Pasif~s-a~YsEslF~~ls~~gl~~~~~--------~~~----~~a~~~~~l 205 (494)
.++|...+++-.+...+.+++++.++==+-+..+ -.--|++..++..++.+.+.+ .+| ++.|+..|.
T Consensus 125 pl~y~t~r~~~~s~l~~~l~~llv~~dn~~~t~sR~ILLDs~LlfF~~~~~y~~~r~~~~~p~s~~w~~~Ll~tGisLGc 204 (699)
T COG1928 125 PLVYLIARRIGYSRLVAALAGLLVAFDNSFVTESRFILLDSFLLFFIVAAAYCFLRFHRQQPFSRRWLKWLLLTGISLGC 204 (699)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHhcceeee
Confidence 8899988888777778888888888776666554 366677777777777666543 223 257888899
Q ss_pred hhhcccchhhhHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHhHHHHHHhhhhhcc
Q 011059 206 SGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHF-LAMWILVCGALRCICIFAPFISFQVYGYFNMC 271 (494)
Q Consensus 206 A~~~RsnGil~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~l~~~iv~~P~~~~q~~~Y~~fC 271 (494)
+..+|=+|++..+.+...++.+.+.-.--+..++ .-+++++.-+ ..++.+|+.++-..=|..|-
T Consensus 205 aiS~KwvGlft~~~vgl~~v~~lW~ll~dk~~s~~~~~kh~~~r~--f~Li~iP~~iyl~~F~vhf~ 269 (699)
T COG1928 205 AISVKWVGLFTTGVVGLLAVYELWSLLYDKSVSWKQIIKHWLARF--FGLIIIPFDIYLLSFYVHFN 269 (699)
T ss_pred EEEeeehhHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHH--HHHHHHHHHHHHHHHhheee
Confidence 9999999988777665554444432111111111 1123333222 24566788775433333343
No 24
>COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=90.68 E-value=4.6 Score=42.20 Aligned_cols=89 Identities=18% Similarity=0.185 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchhhhhh-hhcchHHHHHHHHHHHHHHHhcchHHHHHHHHHhhhcccc
Q 011059 134 FLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSN 212 (494)
Q Consensus 134 ~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pasif~s-a~YsEslF~~ls~~gl~~~~~~~~~~a~~~~~lA~~~Rsn 212 (494)
+.+..+++|...+++.+++-.+..|+++.++=|-=.-++ .+.-+-=-++++++.++++..+|..+|++..|||..+.-.
T Consensus 165 ~~liliiv~~~~~ki~~~~la~~~aA~~~alDp~l~amg~VAMLDIhvaFFtaL~~~fl~~~R~l~sgiAlGLAAs~K~S 244 (438)
T COG4346 165 GALILIIVYFVAYKIARSPLAGLIAALLAALDPLLRAMGGVAMLDIHVAFFTALFMYFLANDRPLWSGIALGLAASVKLS 244 (438)
T ss_pred hhHHHHHHHHHHHHHhcCchHHHHHHHHHhhCcHHHHhcchhHHHHHHHHHHHHHHHHHhcCCeehHHHHHHHHHHHhhc
Confidence 334445566666666667777788888888888655553 3555666678888999999999999999999999999988
Q ss_pred hhhhHHHHHHH
Q 011059 213 GVLNAGYFCFQ 223 (494)
Q Consensus 213 Gil~~~~~~~~ 223 (494)
|-+ +.++++.
T Consensus 245 G~~-vfpil~~ 254 (438)
T COG4346 245 GAF-VFPILWY 254 (438)
T ss_pred ccc-hHHHHHH
Confidence 866 4445443
No 25
>COG3463 Predicted membrane protein [Function unknown]
Probab=90.49 E-value=3.1 Score=44.60 Aligned_cols=93 Identities=16% Similarity=0.230 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchhh--hhhhhcchHHHHHHHHHHHHHHHhcchHHHHHHH
Q 011059 126 GYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI--FYTSIYSESLYALFSVGGLYYLMSGALNISVLWL 203 (494)
Q Consensus 126 ~~lvs~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pasi--f~sa~YsEslF~~ls~~gl~~~~~~~~~~a~~~~ 203 (494)
-+++-.++-.++++.+|++.++.+.+++.|+.-++++.++|.-. -.----.|+++..+.+++++++.|++|-+.-+..
T Consensus 90 Lll~Q~i~ials~~p~y~lA~eil~~E~~al~isilYll~p~i~gi~~FDFH~m~~avp~~~~a~~f~~r~k~~l~li~l 169 (458)
T COG3463 90 LLLIQAIAIALSSLPIYLLAKEILNGEKEALAISILYLLNPYIEGINLFDFHPMAFAVPLFLLAYYFLKRKKWKLFLIFL 169 (458)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcccHHHHHHHHHHHhchhccCchhhhcchHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 34455566677889999999999988999999999999999742 2234567899999999999999999998888887
Q ss_pred HHhhhcccchhhhHH
Q 011059 204 AISGCARSNGVLNAG 218 (494)
Q Consensus 204 ~lA~~~RsnGil~~~ 218 (494)
.+--++.+...+.+.
T Consensus 170 vlIl~tk~~a~liiI 184 (458)
T COG3463 170 VLILLTKEDAFLIII 184 (458)
T ss_pred HHHHHHhcccHHHHH
Confidence 888888887555444
No 26
>PF04922 DIE2_ALG10: DIE2/ALG10 family; InterPro: IPR007006 Members of this entry are glycosyltransferases, belonging to the ALG10 family. The majority of the members are annotated as alpha-1,2 glucosyltransferas. The ALG10 protein from Saccharomyces cerevisiae (Baker's yeast) encodes the alpha-1,2 glucosyltransferase of the endoplasmic reticulum. This protein has been characterised in Rat as potassium channel regulator 1 [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane
Probab=90.48 E-value=9.8 Score=40.49 Aligned_cols=71 Identities=15% Similarity=0.194 Sum_probs=59.7
Q ss_pred hHHHHHHHHHhhcchhhhhh-hhcchHHHHHHHHHHHHHHHhcchHHHHHHHHHhhhcccchhhhHHHHHHH
Q 011059 153 DAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQ 223 (494)
Q Consensus 153 ~~a~~aall~~~~Pasif~s-a~YsEslF~~ls~~gl~~~~~~~~~~a~~~~~lA~~~RsnGil~~~~~~~~ 223 (494)
+.+...++-.++.|--.|++ -=||+-...++.+++.+...+++...|++++.+|...|-+-|+-+++++-.
T Consensus 91 ~~~~~~a~~ialfPllfFFsfLYYTDv~St~~VL~~yl~~~~~~~~~sal~g~~sv~fRQTNIvWv~f~~~~ 162 (379)
T PF04922_consen 91 RKAILSALNIALFPLLFFFSFLYYTDVWSTTFVLLMYLASLKRRHWLSALFGLLSVLFRQTNIVWVAFFAGG 162 (379)
T ss_pred HHHHHHHHHHHHhhHHHHhhHHHHhcHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 34556677778888888887 489999999999998888888888899999999999999999988876554
No 27
>PF05007 Mannosyl_trans: Mannosyltransferase (PIG-M); InterPro: IPR007704 PIG-M has a DXD motif. The DXD motif is found in many glycosyltransferases that utilise nucleotide sugars. It is thought that the motif is involved in the binding of a manganese ion that is required for association of the enzymes with nucleotide sugar substrates [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=84.75 E-value=4.3 Score=40.94 Aligned_cols=50 Identities=18% Similarity=0.238 Sum_probs=44.6
Q ss_pred hcchHHHHHHHHHHHHHHHhcchHHHHHHHHHhhhcccchhhhHHHHHHH
Q 011059 174 IYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQ 223 (494)
Q Consensus 174 ~YsEslF~~ls~~gl~~~~~~~~~~a~~~~~lA~~~RsnGil~~~~~~~~ 223 (494)
+=+||+-+++.++.++++.++++..||++.|+|.-.|-=-+..+.++...
T Consensus 5 GnaEsl~~~lVl~~l~~l~~~~~~~Aa~~lGlaVHfKIYPiIY~~~~~l~ 54 (259)
T PF05007_consen 5 GNAESLLCFLVLLTLYFLLKGRWFLAAILLGLAVHFKIYPIIYALPILLY 54 (259)
T ss_pred cchHHHHHHHHHHHHHHHHcCChhHHHHHhhHHHHhhhccHHHHHHHHHH
Confidence 56899999999999999999999999999999999998777777776554
No 28
>COG5305 Predicted membrane protein [Function unknown]
Probab=82.77 E-value=73 Score=35.67 Aligned_cols=86 Identities=22% Similarity=0.265 Sum_probs=65.2
Q ss_pred ccccccchHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchhh
Q 011059 90 SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI 169 (494)
Q Consensus 90 ~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~~~~lvs~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pasi 169 (494)
.-..-|+|..+++.-...+ |. ..+++=-.|.+++.++..++|-+++..+ +++.+..|+.+++++|..+
T Consensus 94 ~~~~~PLYfll~h~W~~lF--------~~---s~~~~Rsls~L~~~~ai~~~y~l~r~l~-~~~~a~la~~~~AisP~~i 161 (552)
T COG5305 94 LLVHPPLYFLLAHFWMALF--------GN---SLLASRSLSALLSALAIPLVYWLGRELF-GSTTALLAAALMAISPFHI 161 (552)
T ss_pred cCCCCCeeehHHHHHHHHh--------ch---HHHHHHhHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHccChHHH
Confidence 4466789999999887764 21 2566666788889999999999999998 5788889999999999999
Q ss_pred hhh---hhcchHHHHHHHHHH
Q 011059 170 FYT---SIYSESLYALFSVGG 187 (494)
Q Consensus 170 f~s---a~YsEslF~~ls~~g 187 (494)
+.+ -.|+=+.-..+....
T Consensus 162 ~~~qe~R~y~L~~~~~lis~~ 182 (552)
T COG5305 162 FYSQEARSYALAVATTLISAT 182 (552)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 986 266655554443333
No 29
>PF03155 Alg6_Alg8: ALG6, ALG8 glycosyltransferase family; InterPro: IPR004856 N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues. This oligosaccharide is composed of Glc(3)Man(9)GlcNAc(2). The addition of the three glucose residues is the final series of steps in the synthesis of the oligosaccharide precursor. Alg6 transfers the first glucose residue, and Alg8 transfers the second one []. In the human alg6 gene, a C-T transition, which causes Ala333 to be replaced with Val, has been identified as the cause of a congenital disorder of glycosylation, designated as type Ic OMIM:603147 []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0005789 endoplasmic reticulum membrane
Probab=81.44 E-value=25 Score=38.55 Aligned_cols=100 Identities=20% Similarity=0.203 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHHHHhhcchhhhh---hhhcchHHHHHHHHHHHHHHHhcchHHHHH
Q 011059 127 YIVSNVAFLFAAVYFYRLSVMI--LKDPDAALCASLLFCFNPASIFY---TSIYSESLYALFSVGGLYYLMSGALNISVL 201 (494)
Q Consensus 127 ~lvs~~~~~~a~~~Ly~L~~~~--~~~~~~a~~aall~~~~Pasif~---sa~YsEslF~~ls~~gl~~~~~~~~~~a~~ 201 (494)
++++-+....+++..+.-.... -++++....+.++..++|+=+.. .=.|.--+..+ .++++....+++..++++
T Consensus 105 Vi~~d~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~PgLilIDH~HFQYN~~~lGl-~l~si~~~~~~~~l~~a~ 183 (469)
T PF03155_consen 105 VIVSDLLLYIPAVLFFCKSSGRSRNQSSKQRFIALLLILLNPGLILIDHGHFQYNGFLLGL-LLLSIAALIRGRYLLGAI 183 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHCchHHhhhhhhhhHHHHHHHH-HHHHHHHHHhccHHHHHH
Confidence 3444444455544443322111 12455566778888899997744 23676555544 456777788999999999
Q ss_pred HHHHhhhcccchhhhHHHHHHHHHHH
Q 011059 202 WLAISGCARSNGVLNAGYFCFQTMHQ 227 (494)
Q Consensus 202 ~~~lA~~~RsnGil~~~~~~~~~l~~ 227 (494)
+|.++-...-..+-.+..+....++.
T Consensus 184 ~F~~~Ln~Kqm~LY~Ap~~f~yLL~~ 209 (469)
T PF03155_consen 184 LFSLLLNFKQMFLYYAPAFFVYLLGS 209 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888877766665
No 30
>PF05208 ALG3: ALG3 protein; InterPro: IPR007873 The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate. Whereas early mannosylation steps occur on the cytoplasmic side of the endoplasmic reticulum with GDP-Man as donor, the final reactions from Man5GlcNAc2-PP-Dol to Man9GlcNAc2-PP-Dol on the lumenal side use Dol-P-Man []. The ALG3 gene encodes the Dol-P-Man:Man5GlcNAc2-PP-Dol mannosyltransferase.; GO: 0016758 transferase activity, transferring hexosyl groups, 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=72.67 E-value=84 Score=33.39 Aligned_cols=71 Identities=15% Similarity=0.255 Sum_probs=56.2
Q ss_pred hHHHHHHHHHhhc--chhhhhhhhcchHHHHHHHHHHHHHHHhcchHHHHHHHHHhhhcccchhhhHHHHHHH
Q 011059 153 DAALCASLLFCFN--PASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQ 223 (494)
Q Consensus 153 ~~a~~aall~~~~--Pasif~sa~YsEslF~~ls~~gl~~~~~~~~~~a~~~~~lA~~~RsnGil~~~~~~~~ 223 (494)
+..-....+.+++ =-|||.--...+...+++...++++..++||.++++++++|-...-|.++.+..++.-
T Consensus 104 ~~Pp~~~~ll~lSkRlHSI~vLRlFND~~a~~~~~~ai~~~~~~~w~~g~~~yS~avSIKMN~LL~~Pall~~ 176 (368)
T PF05208_consen 104 KLPPWLLILLCLSKRLHSIFVLRLFNDCFAMLFLYAAILLFQRRRWLLGSLLYSLAVSIKMNALLFAPALLVL 176 (368)
T ss_pred CCCchHHHHHHHHHHHHHhhhhheecHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 3334445555555 3467777788899999999999999999999999999999999999999988876443
No 31
>KOG2762 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=70.50 E-value=48 Score=35.03 Aligned_cols=73 Identities=12% Similarity=0.265 Sum_probs=58.5
Q ss_pred hHHHHHHHHHhhc--chhhhhhhhcchHHHHHHHHHHHHHHHhcchHHHHHHHHHhhhcccchhhhHHHHHHHHH
Q 011059 153 DAALCASLLFCFN--PASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTM 225 (494)
Q Consensus 153 ~~a~~aall~~~~--Pasif~sa~YsEslF~~ls~~gl~~~~~~~~~~a~~~~~lA~~~RsnGil~~~~~~~~~l 225 (494)
+.......+.|++ =-|||.--...+++.+++...++....++||.++.+++++|..+.-|-++.+..+++-.+
T Consensus 132 ~vPp~vlvL~~lskRiHSIfVLRLFND~fa~lll~~~i~~~l~qkw~~gs~~fSlAvSVKMNvLLyaPall~~lL 206 (429)
T KOG2762|consen 132 RVPPWVLVLLCLSKRIHSIFVLRLFNDPFAMLLLYVAILLFLKQKWLVGSIFFSLAVSVKMNVLLYAPALLLLLL 206 (429)
T ss_pred cCChHHHHHHHHHHHHHHhhhhHHhcchHHHHHHHHHHHHHHHHHHHhHhhhheeehhhhhhhHHHHHHHHHHHH
Confidence 4455555666665 346676678889999999999999888999999999999999999999998887665433
No 32
>PF14897 EpsG: EpsG family
Probab=67.24 E-value=1e+02 Score=30.78 Aligned_cols=130 Identities=18% Similarity=0.169 Sum_probs=69.6
Q ss_pred cHHHHHHHhhcCCCccc---ccccccchHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011059 73 DSVYFVRIAQCGYEYEQ---SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMIL 149 (494)
Q Consensus 73 Da~~f~~IA~~GY~~e~---~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~~~~lvs~~~~~~a~~~Ly~L~~~~~ 149 (494)
|-..|.+.-++.-+.+. +..+=|+|..+...+..... +. ..--.++ ..+....++..-++..
T Consensus 24 D~~~Y~~~y~~~~~~~~~~~~~~~E~~~~~l~~~~~~~~~-------~~----~~~~~i~----~~i~~~~~~~~i~~~~ 88 (330)
T PF14897_consen 24 DYYNYYEIYDEISNNSFNFSEYGFEPGFYLLNYLFSYFGF-------NY----QFFFFII----SFISLFLFFFFIKKYS 88 (330)
T ss_pred cHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHHCC-------CH----HHHHHHH----HHHHHHHHHHhHHHcc
Confidence 55566666544332221 15666788888887766421 11 1111111 1222233444333333
Q ss_pred CChhHHHHHHHHHhhcchhhhh-hhhcchHHHHHHHHHHHHHHHhcchHHHHHHHHHhhhcccchhhhHHH
Q 011059 150 KDPDAALCASLLFCFNPASIFY-TSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGY 219 (494)
Q Consensus 150 ~~~~~a~~aall~~~~Pasif~-sa~YsEslF~~ls~~gl~~~~~~~~~~a~~~~~lA~~~RsnGil~~~~ 219 (494)
++ .....+.+++ +.+..... ....=.++...+.+.|+....++++..+.++..+|+...+.+++....
T Consensus 89 ~~-~~~~~~~~l~-~~~~~~~~~~~~iRq~~A~~~~~~a~~~~~~~k~~~~~~~~lla~~fH~Saii~l~~ 157 (330)
T PF14897_consen 89 KN-YPIFLSLFLF-FSFFFFFYSFNQIRQSLAISFFLLALSYLYKKKWIKFILLVLLAILFHYSAIIFLPL 157 (330)
T ss_pred cc-hHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 2122333333 22222222 234456666667777777778888888888899999999888766555
No 33
>COG5650 Predicted integral membrane protein [Function unknown]
Probab=62.14 E-value=13 Score=41.01 Aligned_cols=106 Identities=14% Similarity=0.204 Sum_probs=63.2
Q ss_pred HHHHHHhhcchhhhhhhhcchHHHHHHHHHHHHHHHhcchHHHHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHhhh
Q 011059 157 CASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKK 236 (494)
Q Consensus 157 ~aall~~~~Pasif~sa~YsEslF~~ls~~gl~~~~~~~~~~a~~~~~lA~~~RsnGil~~~~~~~~~l~~~~~~~~~~~ 236 (494)
+.+.+...+|-=.|-...=.+..-+++..+++.. |+|..+||+++|+++.....-....+++++... ++. +.
T Consensus 199 ~~valv~as~~v~f~v~~~~DtI~~ffla~a~v~--r~rP~lAGvl~Gls~a~K~~P~Ivl~pll~~~~----key--g~ 270 (536)
T COG5650 199 LDVALVAASPLVGFAVFTVFDTIWAFFLAAALVC--RGRPKLAGVLIGLSSAFKQIPLIVLPPLLYLIY----KEY--GL 270 (536)
T ss_pred eeeeeeeccceEEEEEecchhHHHHHHHHHHHHh--cCCchHHHHHHHHHHHhhcCchhhHHHHHHHHH----Hhc--Cc
Confidence 3444444555111333344566677777777765 899999999999999999988887887765322 210 11
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHHHHHHhhhhhccC
Q 011059 237 RHFLAMWILVCGALRCICIFAPFISFQVYGYFNMCL 272 (494)
Q Consensus 237 ~~~~~~~~~~~~~l~~~iv~~P~~~~q~~~Y~~fC~ 272 (494)
|+ +.+.+...++..+++=.||++..=.+|.++-.
T Consensus 271 ~~--a~~f~~~aa~t~lLvN~PfiI~~P~aw~~sil 304 (536)
T COG5650 271 RP--AIKFIATAAITWLLVNLPFIILGPRAWVESIL 304 (536)
T ss_pred ch--HHHHHHHHHHHHHHHcCceEEechHHHHHHHH
Confidence 11 12222233444556667887755456666553
No 34
>KOG2576 consensus Glucosyltransferase - Alg8p [Transcription]
Probab=61.92 E-value=62 Score=34.74 Aligned_cols=101 Identities=15% Similarity=0.224 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchhhhh---hhhcchHHHHHHHHHHHHHHHhcchHHHHH
Q 011059 125 AGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFY---TSIYSESLYALFSVGGLYYLMSGALNISVL 201 (494)
Q Consensus 125 ~~~lvs~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pasif~---sa~YsEslF~~ls~~gl~~~~~~~~~~a~~ 201 (494)
-.++++-++.+.++---|+++.++-+|++-.+.++++...+|+=+.. .-.|.--+|..+. +.+..+.++|.++++.
T Consensus 103 ~SVIf~dll~~~~~rr~~~l~~kl~k~~~~~~~~a~ll~~s~gLlIvDhIHFQYNgfLfgilL-lSI~~l~~kr~l~~A~ 181 (500)
T KOG2576|consen 103 FSVIFSDLLLLYGLRRSYRLTSKLGKDQKQRFACAVLLLLSPGLLIVDHIHFQYNGFLFGILL-LSIVFLKTKRYLLSAF 181 (500)
T ss_pred ehhHHHHHHHHHHHhhhhcccccCCcccccchHHHHHHHhCCCcEEEEEeeeecccHHHHHHH-HHHHHHhhhhHHHHHH
Confidence 34666777766665568888888877888888899999999997754 3478888888765 4455566888899999
Q ss_pred HHHHhhhcccchhhhHHHHHHHHHH
Q 011059 202 WLAISGCARSNGVLNAGYFCFQTMH 226 (494)
Q Consensus 202 ~~~lA~~~RsnGil~~~~~~~~~l~ 226 (494)
.++..-...-.=+-.+..+.++.++
T Consensus 182 ~fsvll~FKHIflY~ApaY~vylLr 206 (500)
T KOG2576|consen 182 LFSVLLNFKHIFLYVAPAYFVYLLR 206 (500)
T ss_pred HHHHHHhhhhheeeechhHHHHHHH
Confidence 9988877776555445444444454
No 35
>COG5617 Predicted integral membrane protein [Function unknown]
Probab=50.98 E-value=4.7e+02 Score=30.63 Aligned_cols=129 Identities=18% Similarity=0.169 Sum_probs=71.6
Q ss_pred ccccHHHHHHHhhcCCCcccccccccchHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011059 70 IVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMIL 149 (494)
Q Consensus 70 ~~WDa~~f~~IA~~GY~~e~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~~~~lvs~~~~~~a~~~Ly~L~~~~~ 149 (494)
..||-.|| +||+ -.-|+|=+|.++-.+...+. +... .... +.+. +++ +.....|.+.+..-
T Consensus 54 ~~w~~~WY-----~G~p---flrYypPl~Yli~aal~~l~-------~d~~-~t~~-v~~~-la~-llG~~~~~~~r~~g 114 (801)
T COG5617 54 PPWCEYWY-----NGYP---FLRYYPPLSYLIGAALNFLL-------GDVV-TTYA-VFLM-LAF-LLGAGGWLLWRLRG 114 (801)
T ss_pred CCcchhhh-----cCCC---cceecCcHHHHHHHHHHHhh-------cChh-HHHH-HHHH-HHH-HHHHHHHHHHHhhc
Confidence 67788887 5774 35566777777665544321 2110 1111 1111 222 22233444444444
Q ss_pred CChhHHHHHHHHHhhcchhhhhhhhcchHHH-----HHHHHH---HHHHHH-hcch----HHHHHHHHHhhhcccchhhh
Q 011059 150 KDPDAALCASLLFCFNPASIFYTSIYSESLY-----ALFSVG---GLYYLM-SGAL----NISVLWLAISGCARSNGVLN 216 (494)
Q Consensus 150 ~~~~~a~~aall~~~~Pasif~sa~YsEslF-----~~ls~~---gl~~~~-~~~~----~~a~~~~~lA~~~RsnGil~ 216 (494)
.....|..+++++.++|-.+ ...++|.-+ ..+... .++-.. +++. +.+++...+++.|.+.|-.+
T Consensus 115 ~t~~ia~I~alL~ltsp~~l--~vlf~EGniP~v~~i~f~pl~l~~l~~~~~~Gkk~r~~l~~allmslv~~tH~m~~~~ 192 (801)
T COG5617 115 RTGFIALISALLWLTSPENL--KVLFIEGNIPRVLAIGFGPLALGLLERFLERGKKERSLLRMALLMSLVLLTHPMGGAL 192 (801)
T ss_pred cccchHHHHHHHHHhChhhe--EEEEecCcccHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778999999999999864 456777532 222222 222223 2221 34567788999999877776
Q ss_pred HHH
Q 011059 217 AGY 219 (494)
Q Consensus 217 ~~~ 219 (494)
.+.
T Consensus 193 ~g~ 195 (801)
T COG5617 193 SGG 195 (801)
T ss_pred HHH
Confidence 654
No 36
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=49.06 E-value=4.9e+02 Score=30.30 Aligned_cols=83 Identities=22% Similarity=0.305 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCh--hHHHHHHHHHhhcchhhhhh--hhcchHH-HHHHHHHHHHHHH-hcchHH
Q 011059 125 AGYIVSNVAFLFAAVYFYRLSVMILKDP--DAALCASLLFCFNPASIFYT--SIYSESL-YALFSVGGLYYLM-SGALNI 198 (494)
Q Consensus 125 ~~~lvs~~~~~~a~~~Ly~L~~~~~~~~--~~a~~aall~~~~Pasif~s--a~YsEsl-F~~ls~~gl~~~~-~~~~~~ 198 (494)
+-.++..+-..+|.+..|.+.++..+++ ..+..++++|+++--.+... -...+.+ +.-|.++|+--+. ++++.+
T Consensus 91 ~~~~~~~lk~~lag~~~~~~l~~~~~~~~~~~~~i~s~~Yafsg~~~~~~~~~~fld~~i~lPL~llgie~~~~~~k~~~ 170 (843)
T PF09586_consen 91 AILLLIILKIGLAGLFFYLYLRKFKKSRSDWAALIGSLLYAFSGYVIYYSFNIMFLDAMILLPLLLLGIERLLKEKKWWL 170 (843)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhcCCcch
Confidence 3334444555667777888888887767 88999999999986555532 1223322 2335566665443 344433
Q ss_pred HHHHHHHhh
Q 011059 199 SVLWLAISG 207 (494)
Q Consensus 199 a~~~~~lA~ 207 (494)
=.+..+++.
T Consensus 171 ~~~~~~l~~ 179 (843)
T PF09586_consen 171 FIISLALAL 179 (843)
T ss_pred hHHHHHHHH
Confidence 333344444
No 37
>PRK13375 pimE mannosyltransferase; Provisional
Probab=47.09 E-value=4e+02 Score=28.84 Aligned_cols=29 Identities=14% Similarity=0.185 Sum_probs=23.0
Q ss_pred HHhcchHHHHHHHHHhhhcccchhhhHHH
Q 011059 191 LMSGALNISVLWLAISGCARSNGVLNAGY 219 (494)
Q Consensus 191 ~~~~~~~~a~~~~~lA~~~RsnGil~~~~ 219 (494)
+.++|++.+|++.|+|+....+-.++..+
T Consensus 167 ll~~r~~~aGvliGLAaaIKlTPavf~l~ 195 (409)
T PRK13375 167 VYSSRWWLSGLLVGLAAGVKLTPAITGLY 195 (409)
T ss_pred HhcCCccHHHHHHHHHHHhhhhhHHHHHH
Confidence 45778889999999999999887664443
No 38
>KOG2642 consensus Alpha-1,2 glucosyltransferase/transcriptional activator [Posttranslational modification, protein turnover, chaperones; Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=44.23 E-value=1.3e+02 Score=31.92 Aligned_cols=69 Identities=19% Similarity=0.210 Sum_probs=55.4
Q ss_pred HHHHHHHhhcchhhhh-hhhcchHHHHHHHHHHHHHHHhcchHHHHHHHHHhhhcccchhhhHHHHHHHHH
Q 011059 156 LCASLLFCFNPASIFY-TSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTM 225 (494)
Q Consensus 156 ~~aall~~~~Pasif~-sa~YsEslF~~ls~~gl~~~~~~~~~~a~~~~~lA~~~RsnGil~~~~~~~~~l 225 (494)
+.+..+-.+ |.-.++ ---|||...+.+.+.+.+....+....++.+++.+.++|.+-+.-+++.+...+
T Consensus 116 f~~~tl~sl-P~l~~fsfLfYTD~~St~~vllay~f~~~~n~~~SAfl~~~s~lfRQTNIIWa~fia~~vi 185 (446)
T KOG2642|consen 116 FTASTLGSL-PILIFFSFLFYTDLGSTFFVLLAYLFCLYGNHKTSAFLGFCSFLFRQTNIIWAVFIAGNVI 185 (446)
T ss_pred eehhHHhhc-cHHHHHHHHHHHhHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 334444444 555555 468999999999999999888999999999999999999999999998875544
No 39
>PHA02898 virion envelope protein; Provisional
Probab=33.19 E-value=1.7e+02 Score=24.72 Aligned_cols=66 Identities=20% Similarity=0.221 Sum_probs=31.9
Q ss_pred cccchhhhHHHHHHHHHH-HHHHHHHhhhhh-HHHHHHH-HHHHHHHHHHHHhHHHHHHhhhhhccCCCCC
Q 011059 209 ARSNGVLNAGYFCFQTMH-QAYDALFLKKRH-FLAMWIL-VCGALRCICIFAPFISFQVYGYFNMCLGRSP 276 (494)
Q Consensus 209 ~RsnGil~~~~~~~~~l~-~~~~~~~~~~~~-~~~~~~~-~~~~l~~~iv~~P~~~~q~~~Y~~fC~~~~~ 276 (494)
.|.+|++.+|.++.-+-. .++-+..+.+.+ -..||.+ +.+++.++++++..++ +-+|.+||.+...
T Consensus 9 N~~s~vli~GIiLL~~ACIfAfidfSK~~~~~~~~wRalSii~FIlgivl~lG~~i--fs~y~r~C~~~~~ 77 (92)
T PHA02898 9 NRPSYVVAFGIILLIVACICAYIELSKSEKPADSALRSISIISFILAIILILGIIF--FKGYNMFCGGNTT 77 (92)
T ss_pred cCcchHHHHHHHHHHHHHHHheehhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHH--HHHHhhhcCCCcc
Confidence 577788777765432211 122111122212 1223322 2344455555555555 3689999986543
No 40
>PHA03048 IMV membrane protein; Provisional
Probab=32.89 E-value=1.7e+02 Score=24.75 Aligned_cols=25 Identities=8% Similarity=0.018 Sum_probs=16.1
Q ss_pred HHHHHHHHHHhHHHHHHhhhhhccCCC
Q 011059 248 GALRCICIFAPFISFQVYGYFNMCLGR 274 (494)
Q Consensus 248 ~~l~~~iv~~P~~~~q~~~Y~~fC~~~ 274 (494)
+++.++++.+..++ |-+|.+||.+.
T Consensus 50 ~FIlgivl~lG~~i--fsmy~r~C~~~ 74 (93)
T PHA03048 50 AFVLGIVMTIGMLI--YSMWGRYCTPS 74 (93)
T ss_pred HHHHHHHHHHHHHH--HHHHhcccCCC
Confidence 44455555555555 46889999864
No 41
>KOG2575 consensus Glucosyltransferase - Alg6p [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=27.63 E-value=8.3e+02 Score=26.65 Aligned_cols=102 Identities=14% Similarity=0.145 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHh-CChhHHHHHHHHHhhcchhhhhh---hhcchHHHHHHHHHHHHHHHhcch
Q 011059 122 LGLAGYIVSNVAFLFAAVYFYRLSV-MIL-KDPDAALCASLLFCFNPASIFYT---SIYSESLYALFSVGGLYYLMSGAL 196 (494)
Q Consensus 122 ~~~~~~lvs~~~~~~a~~~Ly~L~~-~~~-~~~~~a~~aall~~~~Pasif~s---a~YsEslF~~ls~~gl~~~~~~~~ 196 (494)
..-+.++++.+...+-++++|-... +.. ++.+.+. +.+..+.|+-+..- -.| .+...-++..+...+.+++.
T Consensus 137 fMR~TViisd~liy~Pa~ify~~~~~r~~~~~~~~a~--~~~iLl~P~L~LID~GHFQY-NsisLGl~~~ai~~ll~~~~ 213 (510)
T KOG2575|consen 137 FMRSTVIISDLLIYLPALIFYFKWLHRTRSKKSKIAY--AALILLYPSLLLIDHGHFQY-NSISLGLTLYAIAALLKNFY 213 (510)
T ss_pred HHHHHHHHHhHHHHhhHHHHHHHHhhhccCcccHHHH--HHHHHhCCceEEEecCccee-chhHHHHHHHHHHHHHHhHH
Confidence 3456677888888888888776544 222 2233443 45566788765431 234 34555566777778888999
Q ss_pred HHHHHHHHHhhhcccchhhhHHHHHHHHHH
Q 011059 197 NISVLWLAISGCARSNGVLNAGYFCFQTMH 226 (494)
Q Consensus 197 ~~a~~~~~lA~~~RsnGil~~~~~~~~~l~ 226 (494)
.+|+++|.+|-.-....+-.+.++....+.
T Consensus 214 ~~as~~F~LAlnyKQMeLY~A~pfF~fLLg 243 (510)
T KOG2575|consen 214 VLASVLFVLALNYKQMELYHALPFFAFLLG 243 (510)
T ss_pred HHHHHHHHHHHhHHHHHHHhchHHHHHHHH
Confidence 999999999998888888888776555443
No 42
>KOG2552 consensus Major facilitator superfamily permease - Cdc91p [General function prediction only]
Probab=25.88 E-value=6.8e+02 Score=26.75 Aligned_cols=69 Identities=20% Similarity=0.189 Sum_probs=52.4
Q ss_pred HHHHHHHHHhhcchhhhhhhhcchHH-HHHHHHHHHHHHHhcchHHHHHHHHHhhhcccchhhhHHHHHH
Q 011059 154 AALCASLLFCFNPASIFYTSIYSESL-YALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCF 222 (494)
Q Consensus 154 ~a~~aall~~~~Pasif~sa~YsEsl-F~~ls~~gl~~~~~~~~~~a~~~~~lA~~~RsnGil~~~~~~~ 222 (494)
.+.++++++++||-++.-..+-|-+. -.+.+...+|...+++..+++.+.++++---.+.+++..+++.
T Consensus 145 i~~~v~l~Yl~NPlTilSCi~~St~~I~N~~v~~~ly~av~~~~~l~a~~la~~t~~s~yp~~L~~P~l~ 214 (388)
T KOG2552|consen 145 IGDLVALLYLFNPLTILSCIGLSTTVIENFAVAVSLYGAVTGRVPLAAFGLAIATHLSLYPATLTIPLLF 214 (388)
T ss_pred HHHHHHHHHHhCceeeeeeccccchHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 45689999999999987765554443 3555566677778889999999999999777788877776544
No 43
>KOG2292 consensus Oligosaccharyltransferase, STT3 subunit [Posttranslational modification, protein turnover, chaperones]
Probab=21.91 E-value=2e+02 Score=32.17 Aligned_cols=64 Identities=16% Similarity=0.179 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHhhcchhhhhhhh--c-chHHHHHHHHHHHHHHHhcc
Q 011059 131 NVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTSI--Y-SESLYALFSVGGLYYLMSGA 195 (494)
Q Consensus 131 ~~~~~~a~~~Ly~L~~~~~~~~~~a~~aall~~~~Pasif~sa~--Y-sEslF~~ls~~gl~~~~~~~ 195 (494)
-+++-++++.-|.|++++. |...++.|+.+.++.|+-+==|.+ | .|....++....+|+..|..
T Consensus 124 P~FSg~TsiaTY~ltkEl~-~~gaGL~AA~fiaivPgYiSRSVAGSYDNE~IAIfal~~T~ylwiKav 190 (751)
T KOG2292|consen 124 PLFSGLTSIATYLLTKELK-SAGAGLLAAAFIAIVPGYISRSVAGSYDNEGIAIFALLFTYYLWIKAV 190 (751)
T ss_pred hhhhchHHHHHHHHHHHHh-cccccHHHHHHHhhCcccccccccccccchHHHHHHHHHHHHHHHHHh
Confidence 3455667888999999886 778999999999999998755543 3 58877777777777766643
Done!