Query 011062
Match_columns 494
No_of_seqs 265 out of 1999
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 20:01:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011062.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011062hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkt_A Multi antimicrobial ext 100.0 2.9E-49 1E-53 396.4 38.0 432 45-479 8-450 (460)
2 3mkt_A Multi antimicrobial ext 99.8 4.2E-20 1.5E-24 184.5 19.6 208 42-250 231-445 (460)
3 1pw4_A Glycerol-3-phosphate tr 94.3 3.9 0.00013 39.2 38.5 25 447-471 409-433 (451)
4 4aps_A DI-OR tripeptide H+ sym 92.7 7.7 0.00026 37.6 24.7 53 417-470 418-470 (491)
5 3o7q_A L-fucose-proton symport 90.2 13 0.00044 35.3 31.2 47 49-95 26-74 (438)
6 4ev6_A Magnesium transport pro 38.7 69 0.0024 29.3 7.0 52 423-477 279-338 (339)
7 1pw4_A Glycerol-3-phosphate tr 21.6 4.8E+02 0.016 24.0 18.1 41 50-90 253-296 (451)
8 4hkr_A Calcium release-activat 21.4 3.5E+02 0.012 22.4 15.0 81 80-161 56-144 (214)
9 2k1k_A Ephrin type-A receptor 21.3 99 0.0034 17.8 3.0 22 451-472 14-35 (38)
10 2ks1_B Epidermal growth factor 19.0 1.6E+02 0.0056 17.6 4.4 11 239-249 26-36 (44)
No 1
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=100.00 E-value=2.9e-49 Score=396.42 Aligned_cols=432 Identities=22% Similarity=0.325 Sum_probs=398.2
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHhHHhhHHHHHHhhhcccchhH
Q 011062 45 VEEAKDQVLFSLPMILTNVSYYAIPLVSVMFAGHLGELQLAGATLANSWAYVTGFAFTQGLSGALETLCGQGFGAKQYRM 124 (494)
Q Consensus 45 ~~~~~~l~~~~~p~~~~~~~~~~~~~i~~~~i~~lg~~~~~~~~~~~~i~~~~~~~~~~gl~~~~~~~~s~~~g~~~~~~ 124 (494)
++..|++++.++|.++++++..+.+.+|+.+++|+|++++|+++++.++..+. ..+..|++++..+.++|++|++|+++
T Consensus 8 ~~~~k~~~~~~~p~~~~~~~~~~~~~v~~~~~~~lg~~~~~~~~~~~~i~~~~-~~~~~g~~~~~~~~is~~~g~~~~~~ 86 (460)
T 3mkt_A 8 KKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPS-ILFGVGLLMALVPVVAQLNGAGRQHK 86 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTTSSHHHHHHHHHHHH-HHHHHHHHHHHGGGCTTTTSSSSTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCChhH
Confidence 36689999999999999999999999999999999999999999999998877 88889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcCCchHHHHHH
Q 011062 125 LGIYMQTSCIISCFFSIIISFLWFYTEPILILLHQDPNISEQAGLYMKYLIPGLFAFGFLQNFLRFLQTQSIVMPLVFFS 204 (494)
Q Consensus 125 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 204 (494)
.++.+++++.+..++++++.++..+.++++.+++.+++..+.+..|+++.+++.++..+.....+.+++.||++.++..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 166 (460)
T 3mkt_A 87 IPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIG 166 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCSSTTHHHHHHHHHHTTGGGHHHHHHHHHHHTTTTCTTSCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 99999999999999999887777888999888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh----cCcccchhHHHHHHHHHHHHHHHHHHHHhcccccc-c-cCCCChHHHHHHHHHHHHHhh
Q 011062 205 ALPLAIHFGIAYSLVHW----TSLGFGGAPLACSISLWISTLSLAIYILCSKKTGR-T-WEGFSFESFSVLLTNLKVAMP 278 (494)
Q Consensus 205 ~~~~~~~i~~~~~li~~----~~~g~~g~~~a~~i~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~k~~~~~~~p 278 (494)
+++.++|+++++++++. +++|+.|+++++.+++.+..++..++.+++++.++ + ++++.+.+++..|+++++|+|
T Consensus 167 ~~~~~~~i~l~~~li~~~~~~p~~g~~g~a~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p 246 (460)
T 3mkt_A 167 FIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFP 246 (460)
T ss_dssp HHHHHHHHHHHHHHHSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCSCCCCSSTTSSTTTSHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHhCcchhhhhhhhcccccCHHHHHHHHHHhhH
Confidence 99999999999999985 26899999999999999999998888866544322 1 122223456788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Q 011062 279 SAAMVCLEFWSFEILVFLAGLMPNSELSTSLIAMCVNTQAICYNFSYGLSAAASTRVSNELGAGTIDRAKNAMAVTLKLV 358 (494)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (494)
.++++....+.+.+++.+++++| ++++++|+++.++.++..++..+++++..|.+++++|++|.+++++..+++.+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~g--~~~va~~~i~~~i~~~~~~~~~~~~~a~~p~i~~~~g~~~~~~~~~~~~~~~~~~ 324 (460)
T 3mkt_A 247 VAAALFFEVTLFAVVALLVAPLG--STVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVGLMTG 324 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999997 7799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhccCCcHHHHHHHHhhhHHHHHHHHHHhHHHHHHHHHhhcCchhhHHHHHHHHHHHHHHHH
Q 011062 359 VLLALIIDLALAFGHNIWASFFTDSREIVQEFASMTPFIVISIIFDAMQAILSGVARGCGWQHLAVWVNLATFYFIGMPL 438 (494)
Q Consensus 359 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~i~~ 438 (494)
..++++.++++.++++++.++|.+|+++.+.+.+++++++++.++++++....+++++.||++.+++.++++.|++++|+
T Consensus 325 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~i~l 404 (460)
T 3mkt_A 325 LATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPT 404 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh----cC-CCchhHHHHHHHHHHHHHHHHHHHHHhcCchh
Q 011062 439 ALLFGFK----LN-LYVKGLWIGLVCGLASQACSLFLITLRRKWTK 479 (494)
Q Consensus 439 ~~~l~~~----~~-~g~~G~~~a~~~~~~i~~~~~~~~~~k~~~~~ 479 (494)
++++... ++ +|..|+|+++.+++.+..++..+.++|..+++
T Consensus 405 ~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~~~~~~~ 450 (460)
T 3mkt_A 405 GYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWLQKQS 450 (460)
T ss_dssp HHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSSSSCCST
T ss_pred HHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999776 56 89999999999999999988877776655544
No 2
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.84 E-value=4.2e-20 Score=184.52 Aligned_cols=208 Identities=14% Similarity=0.128 Sum_probs=193.9
Q ss_pred cccHHHHHHHHHhhHHHHHHHHHHHHHhHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHhHHhhHHHHHHhhhcccc
Q 011062 42 VLDVEEAKDQVLFSLPMILTNVSYYAIPLVSVMFAGHLGELQLAGATLANSWAYVTGFAFTQGLSGALETLCGQGFGAKQ 121 (494)
Q Consensus 42 ~~~~~~~~~l~~~~~p~~~~~~~~~~~~~i~~~~i~~lg~~~~~~~~~~~~i~~~~~~~~~~gl~~~~~~~~s~~~g~~~ 121 (494)
+++++..|++++.++|..++++...+...+|+.+++++|++++|+|+++.++.++. ..+..+++++..|.+++++|++|
T Consensus 231 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~va~~~i~~~i~~~~-~~~~~~~~~a~~p~i~~~~g~~~ 309 (460)
T 3mkt_A 231 KPQPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLV-FMFPMSIGAAVSIRVGHKLGEQD 309 (460)
T ss_dssp SSTTSSTTTSHHHHHHHHHHHHHHHHHHHHHHHHTCTTSSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCC
Confidence 34566789999999999999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHhCCChhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhcCCchHH
Q 011062 122 YRMLGIYMQTSCIISCFFSIIISFL-WFYTEPILILLHQDPNISEQAGLYMKYLIPGLFAFGFLQNFLRFLQTQSIVMPL 200 (494)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~ 200 (494)
+|+.++..+.++.+...++++++++ .++.+++..++.+|++..+.+..++++.+++.++.+++....+.+++.||++.+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 389 (460)
T 3mkt_A 310 TKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAI 389 (460)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Confidence 9999999999999999999999887 899999999998888888999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HHHHHHHHHHhhh----cC-cccchhHHHHHHHHHHHHHHHHHHHHh
Q 011062 201 VFFSALPL-AIHFGIAYSLVHW----TS-LGFGGAPLACSISLWISTLSLAIYILC 250 (494)
Q Consensus 201 ~~~~~~~~-~~~i~~~~~li~~----~~-~g~~g~~~a~~i~~~~~~~~~~~~~~~ 250 (494)
+..+++.. ++++++++++.+. ++ +|..|+++++.+++.+..++..+.+++
T Consensus 390 ~~~~~~~~~~~~i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~~ 445 (460)
T 3mkt_A 390 FHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYW 445 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 8999999999985 55 899999999999999998887766643
No 3
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=94.32 E-value=3.9 Score=39.17 Aligned_cols=25 Identities=12% Similarity=0.134 Sum_probs=14.3
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHH
Q 011062 447 NLYVKGLWIGLVCGLASQACSLFLI 471 (494)
Q Consensus 447 ~~g~~G~~~a~~~~~~i~~~~~~~~ 471 (494)
..|....++...+..++..++....
T Consensus 409 ~~g~~~~~~~~~~~~~~~~~~~~~~ 433 (451)
T 1pw4_A 409 FFGWDGGFMVMIGGSILAVILLIVV 433 (451)
T ss_dssp SSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666666666555555544443
No 4
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=92.72 E-value=7.7 Score=37.64 Aligned_cols=53 Identities=9% Similarity=-0.147 Sum_probs=23.9
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHH
Q 011062 417 CGWQHLAVWVNLATFYFIGMPLALLFGFKLNLYVKGLWIGLVCGLASQACSLFL 470 (494)
Q Consensus 417 ~g~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~g~~G~~~a~~~~~~i~~~~~~~ 470 (494)
..+.......+.... +.......+.+...+.+....+.......++..++.+.
T Consensus 418 ~~~g~~~g~~~~~~~-~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (491)
T 4aps_A 418 AFNSQMMSMWFLSSS-VGSALNAQLVTLYNAKSEVAYFSYFGLGSVVLGIVLVF 470 (491)
T ss_dssp TCSSSSTHHHHHHHH-HHHHHHHHHGGGGGGSSTTHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444433 33333444454444445555555444444444444433
No 5
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=90.17 E-value=13 Score=35.26 Aligned_cols=47 Identities=15% Similarity=0.064 Sum_probs=22.9
Q ss_pred HHHHHhhHHHHHHHHHHHHHhHHHHHHhhccC--hHHHHHHHHHHHHHH
Q 011062 49 KDQVLFSLPMILTNVSYYAIPLVSVMFAGHLG--ELQLAGATLANSWAY 95 (494)
Q Consensus 49 ~~l~~~~~p~~~~~~~~~~~~~i~~~~i~~lg--~~~~~~~~~~~~i~~ 95 (494)
+.+.....-.+...............+..++| +.+.+.......+..
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~ 74 (438)
T 3o7q_A 26 IPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGY 74 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 34444444444444444555555555555544 556555554444433
No 6
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=38.67 E-value=69 Score=29.29 Aligned_cols=52 Identities=15% Similarity=0.165 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-------cCCC-chhHHHHHHHHHHHHHHHHHHHHHhcCc
Q 011062 423 AVWVNLATFYFIGMPLALLFGFK-------LNLY-VKGLWIGLVCGLASQACSLFLITLRRKW 477 (494)
Q Consensus 423 ~~~~~~~~~~~~~i~~~~~l~~~-------~~~g-~~G~~~a~~~~~~i~~~~~~~~~~k~~~ 477 (494)
.-..++++ ++.+|+.++.+.+ |..+ ..|.| ......++.+++.+++++|++|
T Consensus 279 mk~LTiit--~IflP~T~IaGiyGMNf~~mPel~~~~gy~-~~l~~m~~~~~~~~~~fkrk~W 338 (339)
T 4ev6_A 279 MKILTMVT--TIFAVPMWITGIYGMNFSYLPLANNPQGFW-LVMALMVVIIMIFVYIFRRSGW 338 (339)
T ss_dssp HHHHHHHH--HHSSHHHHHHHHTTCCCSCCTTSSCTTHHH-HHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHH--HHHHHHHHHHhhccCcCCCCCCccCchHHH-HHHHHHHHHHHHHHHHHHHcCC
Confidence 33444444 3445666666543 2222 23444 4444455666777888899888
No 7
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=21.56 E-value=4.8e+02 Score=23.99 Aligned_cols=41 Identities=10% Similarity=-0.076 Sum_probs=17.7
Q ss_pred HHHHhhHHHHHHHHHHHHHhHHHHHHhhc-cC--hHHHHHHHHH
Q 011062 50 DQVLFSLPMILTNVSYYAIPLVSVMFAGH-LG--ELQLAGATLA 90 (494)
Q Consensus 50 ~l~~~~~p~~~~~~~~~~~~~i~~~~i~~-lg--~~~~~~~~~~ 90 (494)
.++...+..+...............++.. +| +.+.+.....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 296 (451)
T 1pw4_A 253 LLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFL 296 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 34444444444444444443334444443 44 4444444333
No 8
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=21.43 E-value=3.5e+02 Score=22.41 Aligned_cols=81 Identities=10% Similarity=0.026 Sum_probs=47.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhHHhhHHHHHHhh--------hcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 011062 80 GELQLAGATLANSWAYVTGFAFTQGLSGALETLCGQG--------FGAKQYRMLGIYMQTSCIISCFFSIIISFLWFYTE 151 (494)
Q Consensus 80 g~~~~~~~~~~~~i~~~~~~~~~~gl~~~~~~~~s~~--------~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 151 (494)
.+.-+.+|+....+.-.. ..+..-+++-+-|-+-.. ..+.-.++.+.+.-.+..++..+|+++.+.-+..-
T Consensus 56 p~~LLi~fav~Ttllv~v-ml~AlMIsTcILPnIeav~~~h~~~~v~esPH~r~~~yIE~AW~fST~lGi~LFL~evall 134 (214)
T 4hkr_A 56 PPGMLIAFAICTTLLVAV-HMLALMISTCILPNIETVSNLHSISLVHESPHERLHWYIETAWAFSTLLGLILFLLEIAIL 134 (214)
T ss_dssp ---CHHHHHHHHHHHHHH-HHHHHHHHHHTTTC----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHhhcccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344567777777776655 666666666655554433 22334578888888999999888888776643334
Q ss_pred HHHHHhCCCh
Q 011062 152 PILILLHQDP 161 (494)
Q Consensus 152 ~i~~~~~~~~ 161 (494)
-++.++..+.
T Consensus 135 ~WVKF~~~~~ 144 (214)
T 4hkr_A 135 CWVKFYDLSR 144 (214)
T ss_dssp HHHHHTTTCH
T ss_pred heEEeecCCc
Confidence 4555555543
No 9
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=21.30 E-value=99 Score=17.81 Aligned_cols=22 Identities=23% Similarity=0.229 Sum_probs=9.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 011062 451 KGLWIGLVCGLASQACSLFLIT 472 (494)
Q Consensus 451 ~G~~~a~~~~~~i~~~~~~~~~ 472 (494)
.|+.++..++..+...+.++++
T Consensus 14 AGiVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 14 VAVIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeehHHHHHHHHHHHHHHHHe
Confidence 3444444444444444333333
No 10
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=19.00 E-value=1.6e+02 Score=17.58 Aligned_cols=11 Identities=9% Similarity=0.564 Sum_probs=4.5
Q ss_pred HHHHHHHHHHH
Q 011062 239 ISTLSLAIYIL 249 (494)
Q Consensus 239 ~~~~~~~~~~~ 249 (494)
+..+..+++++
T Consensus 26 ii~~~~~~~~R 36 (44)
T 2ks1_B 26 VVALGIGLFMR 36 (44)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 33334444444
Done!