Query 011066
Match_columns 494
No_of_seqs 234 out of 437
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 20:06:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011066.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011066hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bij_A Uncharacterized protein 99.5 6.9E-14 2.4E-18 139.2 13.9 188 58-316 2-262 (285)
2 4af8_A Metacaspase MCA2; hydro 99.3 5.3E-11 1.8E-15 123.1 17.5 204 55-303 88-333 (367)
3 4f6o_A Metacaspase-1; rossmann 99.3 3.5E-11 1.2E-15 123.8 15.8 196 54-302 48-327 (350)
4 3uoa_B Mucosa-associated lymph 98.7 2.2E-07 7.6E-12 96.8 17.2 177 58-302 4-200 (390)
5 2j32_A Caspase-3; Pro-caspase3 95.8 0.028 9.6E-07 54.8 8.9 182 58-303 15-217 (250)
6 4ehd_A Caspase-3; caspase, apo 95.6 0.062 2.1E-06 53.4 10.9 183 57-303 42-245 (277)
7 1m72_A Caspase-1; caspase, cys 95.5 0.041 1.4E-06 54.4 9.1 181 58-302 31-233 (272)
8 3sir_A Caspase; hydrolase; 2.6 95.3 0.11 3.9E-06 50.8 11.3 179 58-303 19-224 (259)
9 1f1j_A Caspase-7 protease; cas 95.2 0.034 1.2E-06 56.0 7.5 182 58-303 68-273 (305)
10 3od5_A Caspase-6; caspase doma 94.8 0.17 5.8E-06 50.1 11.1 120 57-225 19-145 (278)
11 3h11_B Caspase-8; cell death, 94.6 0.19 6.6E-06 49.5 10.9 184 58-303 16-236 (271)
12 2nn3_C Caspase-1; cysteine pro 94.5 0.12 4.2E-06 52.1 9.4 181 58-302 59-261 (310)
13 3e4c_A Caspase-1; zymogen, inf 94.2 0.68 2.3E-05 46.4 14.0 122 57-225 58-188 (302)
14 2h54_A Caspase-1; allosteric s 93.9 0.33 1.1E-05 45.2 10.3 120 58-224 42-170 (178)
15 1nw9_B Caspase 9, apoptosis-re 93.7 0.46 1.6E-05 46.7 11.5 118 58-223 20-151 (277)
16 2fp3_A Caspase NC; apoptosis, 92.5 0.63 2.1E-05 46.9 10.6 119 58-223 60-187 (316)
17 1pyo_A Caspase-2; apoptosis, c 85.4 3.9 0.00013 37.5 9.3 121 58-225 32-159 (167)
18 2dko_A Caspase-3; low barrier 82.3 2.2 7.5E-05 38.3 6.1 119 58-225 15-140 (146)
19 1qtn_A Caspase-8; apoptosis, d 70.9 2.3 7.7E-05 39.0 2.8 120 58-225 22-155 (164)
20 3h11_A CAsp8 and FADD-like apo 63.9 11 0.00037 37.1 6.3 110 58-222 42-154 (272)
21 3p45_A Caspase-6; protease, hu 54.3 5.9 0.0002 36.9 2.4 120 58-226 43-169 (179)
22 2ql9_A Caspase-7; cysteine pro 50.5 5.9 0.0002 36.7 1.7 118 58-224 43-167 (173)
No 1
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=99.52 E-value=6.9e-14 Score=139.18 Aligned_cols=188 Identities=14% Similarity=0.152 Sum_probs=136.0
Q ss_pred CCeEEEEEeccCC----C----Ccchh-hHHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccC
Q 011066 58 GTRWAVLLAGSNG----F----WNYRH-QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYK 128 (494)
Q Consensus 58 ~~~wAVlVagS~g----w----~NYRH-qadv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~ 128 (494)
+++||+||+-+++ | .+-+- ..|+..+.++|++.||+ |++++.+
T Consensus 2 ~~~~ALlIGi~~Y~~~~Y~~~~~~L~~~~nDa~~~~~~L~~~Gf~---v~~l~~~------------------------- 53 (285)
T 3bij_A 2 PKGIALALGLNAVDPKHYGGWAGKLNACEADAEDMAAIAAERGFA---VTTLMTK------------------------- 53 (285)
T ss_dssp CCEEEEEEECSCCCTTTTTTCCCCCSSHHHHHHHHHHHHHHTTCE---EEEEEGG-------------------------
T ss_pred CceEEEEEEeCCccccccCCCcccCCCCHHHHHHHHHHHHHcCCc---eEEecCC-------------------------
Confidence 4789999999873 2 12222 37899999999999997 6666532
Q ss_pred CccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC-------------CcccCCCCCCcCHH
Q 011066 129 GVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP-------------GVLGMPTSRYIYAD 195 (494)
Q Consensus 129 gv~iDY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~-------------g~l~fpd~~~L~a~ 195 (494)
+.|.+|+++.|..- +-+..|+|.+||||+|||.. ++|...|+. |..+
T Consensus 54 ---------~~t~~~i~~al~~l----------~~~~~~~D~~~~yfSGHG~~~~~~~g~e~dg~~~~l~p~D~~-i~~~ 113 (285)
T 3bij_A 54 ---------AATRAKVIDAIGKA----------AKALGKGDIFMLSYSGHGGQVPDTSNDEPDGVDETWCLFDGE-LIDD 113 (285)
T ss_dssp ---------GCCHHHHHHHHHHH----------HHHCCTTCEEEEEEESCEEEEECTTSCCTTCEEEEEECSSSE-EEHH
T ss_pred ---------ccCHHHHHHHHHHH----------HHhCCCCCEEEEEEcCCcccccCCCCCccCCCcceEEecCCC-ccHH
Confidence 25889999888621 11346789999999999962 355555554 7788
Q ss_pred HHHHHHHHHHHcCCCceEEEEeccccccccccc----------------------cCC----------------------
Q 011066 196 ELIDVLKKKHASGNYKSLVFYLEACESGSIFEG----------------------LLP---------------------- 231 (494)
Q Consensus 196 dL~~~L~~m~~~~~Ykklv~~iEAC~SGSmf~~----------------------llp---------------------- 231 (494)
+|.+.|+.+. .-+++++++|||+||++.+. .+|
T Consensus 114 ~l~~~l~~l~---~~~~~~vilD~C~SG~~~~~~p~~~~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~ 190 (285)
T 3bij_A 114 ELYALLGKFA---AGVRVLVFSDSCHSGTVVKMAYYNGTTAARSAGPDEGEIRYRAMPQSVAMRTYRANREFYDTIQQKT 190 (285)
T ss_dssp HHHHHHTTSC---SSCEEEEEEECCCCCCHHHHHHTTC-------------CEESBCCHHHHHHHHHHTHHHHHHHHHHC
T ss_pred HHHHHHHhcc---CCCeEEEEEecCCCCccccccccccccccccccccccccceeecCchhhhhhhhcchhHHHHHhhhc
Confidence 9998887662 35789999999999998762 011
Q ss_pred -------CCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchhhhhhhccccccccccccccHHHHHHHHHhhccCC
Q 011066 232 -------EGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTASY 304 (494)
Q Consensus 232 -------~~~nV~~iTASn~~EsSya~yc~~~~~~~~~~~~tcLgD~fS~~wmedsd~~~l~~eTl~~qf~~vk~~t~~~ 304 (494)
...++++++|+.++|.||-.- .. -+||.+.++-..... ...|+.++++.|++++..
T Consensus 191 ~~~~~~~~~~~~i~lsa~~~~q~A~e~~----------~~-----G~FT~aLl~~L~~~~-~~~s~~~l~~~v~~~~~~- 253 (285)
T 3bij_A 191 KKVDLADVKASILLISGCQDNQLSQDGA----------FN-----GAFTGQLLRVWKNGL-YKGSYRSFHKAIVRRMPP- 253 (285)
T ss_dssp CCCCTTTCSSEEEEEESSCTTSCCEECS----------SS-----CHHHHHHHHHHGGGT-CCSCHHHHHHHHHHHSCT-
T ss_pred ccccccCCCCCEEEEEeCCCCccccccc----------cC-----CHHHHHHHHHHhhCC-CCcCHHHHHHHHHHhcCC-
Confidence 123689999999999998531 12 378888776433222 246999999999998864
Q ss_pred CCCCCCceeecC
Q 011066 305 NSYGSHVMQYGD 316 (494)
Q Consensus 305 ~~~~Shv~~yGd 316 (494)
.+||+.||.
T Consensus 254 ---~Q~P~~~~~ 262 (285)
T 3bij_A 254 ---DQTPNFFTA 262 (285)
T ss_dssp ---TCCCEEEEE
T ss_pred ---CCCcceeCC
Confidence 589999885
No 2
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=99.29 E-value=5.3e-11 Score=123.09 Aligned_cols=204 Identities=17% Similarity=0.132 Sum_probs=134.4
Q ss_pred CCCCCeEEEEEeccCC--CCcchh-hHHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcc
Q 011066 55 DSVGTRWAVLLAGSNG--FWNYRH-QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (494)
Q Consensus 55 ~~~~~~wAVlVagS~g--w~NYRH-qadv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~ 131 (494)
...+++|||||+-+.+ ..+-+- ..|+-.+.+.|++.||+.++|+++.-++- . |+
T Consensus 88 ~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~GF~~~~i~~L~D~~~-----~--p~---------------- 144 (367)
T 4af8_A 88 LPGQTVRALFIGINYYGTSAALSGCCNDVKQMLATLQKRGLPINEAVILVDEDN-----F--PG---------------- 144 (367)
T ss_dssp CTTCCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHTTCCCSEEEEEECCTT-----C--TT----------------
T ss_pred CCCCCeEEEEEEeCCCCCccCCCCHHHHHHHHHHHHHHcCCCchheEEeccccc-----c--cc----------------
Confidence 4458999999999853 223333 37899999999999999999998864421 1 11
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC---------C---cccCCCC---CCcCHHH
Q 011066 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP---------G---VLGMPTS---RYIYADE 196 (494)
Q Consensus 132 iDY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~---------g---~l~fpd~---~~L~a~d 196 (494)
.....|.+|+++.|.-- +-+..|+|.+||||+|||.. | .|.-.|. ..|..+|
T Consensus 145 ---~~~~pTr~nI~~aL~~L----------~~~a~pgD~l~fyFSGHG~q~~d~~de~dg~De~LvP~D~~~~g~I~dde 211 (367)
T 4af8_A 145 ---RTDQPTRDNIVRYMAWL----------VKDAKPGDVLFFHYSGHGTQCKSRGDSDEKYDQCIAPVDFQKSGCIVDDD 211 (367)
T ss_dssp ---CCBCCCHHHHHHHHHHH----------HHTCCTTCEEEEEEESCEEEECCC-----CCEEEECCTTHHHHCCEEHHH
T ss_pred ---cccCCCHHHHHHHHHHH----------HHhCCCCCEEEEEEcCCcCccCCCCCCCCCcceEEEeecCCcCCCccHHH
Confidence 12467999999988721 11357899999999999982 1 1333331 2477788
Q ss_pred HHHHH-HHHHHcCCCceEEEEeccccccccccccC-----------------------CCCCcEEEEeecCCCCcccccc
Q 011066 197 LIDVL-KKKHASGNYKSLVFYLEACESGSIFEGLL-----------------------PEGLNIYATTASNAEESSWGTY 252 (494)
Q Consensus 197 L~~~L-~~m~~~~~Ykklv~~iEAC~SGSmf~~ll-----------------------p~~~nV~~iTASn~~EsSya~y 252 (494)
|.+.| +.+ ..-.++++++|+||||++.+--. +..-+++.++|+..+|.|.-..
T Consensus 212 L~~lLv~~l---~~g~~v~vIlD~ChSGt~~dlp~~~~~r~~~~~~~~~~~~~~~~~~~~~~~vi~~Sac~d~QtSad~~ 288 (367)
T 4af8_A 212 IHKLLFSRL---PEKVRLTAVFDCGHSGSIMDLPFTYVCSGGEQASGTPHMKRIREGNDVLGDVMMISGCADEQTSADVK 288 (367)
T ss_dssp HHHHHTTTC---CTTCEEEEEEECTTCCCCTTCSEEEECCTTCCTTSCCCCEECSSCCCCCSEEEEEEEECCCSCCCCCC
T ss_pred HHHHHHHhc---cCCCEEEEEEeCCCCCcccccccccccccccccccchhhhhhccCCCCCCCEEEEEecCCCCchhhhh
Confidence 88774 333 22469999999999999977210 0112689999999999998753
Q ss_pred CCCCCCCCCCCccccchhhhhhhccccccccccccccHHHHHHHHHhhccC
Q 011066 253 CPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (494)
Q Consensus 253 c~~~~~~~~~~~~tcLgD~fS~~wmedsd~~~l~~eTl~~qf~~vk~~t~~ 303 (494)
-.... ..+ +.-=.-+||+++++-... ...-|..++++.+++....
T Consensus 289 ~~~~f-~~g---~~~~~GafTyali~~L~~--~~~~Ty~~Ll~~vr~~l~~ 333 (367)
T 4af8_A 289 NTATF-GTG---STGAGGAATQCITCMLMN--NQSLSYGKLLIETRDMLKR 333 (367)
T ss_dssp --------C---CCBCBSHHHHHHHHHHHC--CSCCBHHHHHHHHHHHHHH
T ss_pred ccccc-ccc---ccCcccHHHHHHHHHHHh--CCCCCHHHHHHHHHHHHHH
Confidence 10000 000 001124899988875532 2456888888888876653
No 3
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=99.29 E-value=3.5e-11 Score=123.80 Aligned_cols=196 Identities=20% Similarity=0.297 Sum_probs=123.9
Q ss_pred CCCCCCeEEEEEeccCC--CCcchhh-HHHHHHHHHHHh-CCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCC
Q 011066 54 DDSVGTRWAVLLAGSNG--FWNYRHQ-ADICHAYQLLRK-GGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKG 129 (494)
Q Consensus 54 ~~~~~~~wAVlVagS~g--w~NYRHq-adv~~~Yq~L~~-~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~g 129 (494)
....+++|||||+-+.+ +.+-+-- .|+-.+.++|++ .||++++|+++.-++ .+|
T Consensus 48 s~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~~Gf~~~~I~lLtd~~-----~~~----------------- 105 (350)
T 4f6o_A 48 SQCTGRRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQ-----NDL----------------- 105 (350)
T ss_dssp CCCCSCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHHSCCCGGGEEEEETTS-----SCG-----------------
T ss_pred CCCCCCEEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCccceeeecccc-----ccc-----------------
Confidence 34558999999999632 2233333 689999999987 599999998876442 111
Q ss_pred ccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC----------C---cccCCCC---CCcC
Q 011066 130 VPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP----------G---VLGMPTS---RYIY 193 (494)
Q Consensus 130 v~iDY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~----------g---~l~fpd~---~~L~ 193 (494)
....|.+|+++.|.- + +-+..|+|.+||||+|||.. | .|.-.|. ..|.
T Consensus 106 ------~~~pTr~nI~~aL~~----L------~~~a~pgD~llfYFSGHG~q~~d~~gdE~dG~De~lvP~D~~~~g~I~ 169 (350)
T 4f6o_A 106 ------VRVPTRANMIRAMQW----L------VKDAQPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPII 169 (350)
T ss_dssp ------GGSCCHHHHHHHHHH----H------HTTCCTTCEEEEEEESCEEEC-----------CEEECCTTHHHHCCEE
T ss_pred ------ccCCCHHHHHHHHHH----H------HHhCCCCCEEEEEEcCCceeccCCCCCcccCCceEEEeccCCcCCccc
Confidence 125699999999872 1 11246899999999999972 2 2433331 2588
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEeccccccccccc--------cC-----------------------------------
Q 011066 194 ADELIDVLKKKHASGNYKSLVFYLEACESGSIFEG--------LL----------------------------------- 230 (494)
Q Consensus 194 a~dL~~~L~~m~~~~~Ykklv~~iEAC~SGSmf~~--------ll----------------------------------- 230 (494)
.+||.+.|.+. ...=.++++++|+||||++.+- .+
T Consensus 170 ddeL~~~L~~~--l~~g~~vt~IlD~ChSGt~ldlp~~~~~~g~~~e~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~ 247 (350)
T 4f6o_A 170 DDEMHDIMVKP--LQQGVRLTALFDSCHSGTVLDLPYTYSTKGIIKEPNIWKDVGQDGLQAAISYATGNRAALIGSLGSI 247 (350)
T ss_dssp HHHHHHHHTTT--CCTTCEEEEEECSSSCTTTTCCSEEEETTEEEECCCC------------------------------
T ss_pred HHHHHHHHHhh--cCCCCeEEEEEccCCCCcccccccccccccccCcchhhhhccccccchhhhhccccchhhcccchhh
Confidence 88998877542 1234699999999999999751 00
Q ss_pred ---------------------CCCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchhhhhhhcccccccccccccc
Q 011066 231 ---------------------PEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTET 289 (494)
Q Consensus 231 ---------------------p~~~nV~~iTASn~~EsSya~yc~~~~~~~~~~~~tcLgD~fS~~wmedsd~~~l~~eT 289 (494)
...-+|+.++++..+|.|.-+.-.+ ... -.||+++++-... ...-|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~SgCkD~QtSaD~~~~g------~~~-----GAmTyafi~aL~~--~p~~t 314 (350)
T 4f6o_A 248 FKTVKGGMGNNVDRERVRQIKFSAADVVMLSGSKDNQTSADAVEDG------QNT-----GAMSHAFIKVMTL--QPQQS 314 (350)
T ss_dssp ---------------------CCCSEEEEEEEEC-------------------CC-----CHHHHHHHHHHHH--CCCCB
T ss_pred hhhhccccccccchhhhhhccCCCCCEEEEEecCCCCchhhhccCC------cee-----ehhHHHHHHHHHH--CCCCC
Confidence 0012466677777777776654322 122 3788888875442 35568
Q ss_pred HHHHHHHHHhhcc
Q 011066 290 LHQQYELVKTRTA 302 (494)
Q Consensus 290 l~~qf~~vk~~t~ 302 (494)
..++++.++....
T Consensus 315 Y~~Ll~~~r~~L~ 327 (350)
T 4f6o_A 315 YLSLLQNMRKELA 327 (350)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 8888888888665
No 4
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*
Probab=98.74 E-value=2.2e-07 Score=96.84 Aligned_cols=177 Identities=13% Similarity=0.135 Sum_probs=121.1
Q ss_pred CCeEEEEEeccCCC--Ccchhh-HHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCccccC
Q 011066 58 GTRWAVLLAGSNGF--WNYRHQ-ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDY 134 (494)
Q Consensus 58 ~~~wAVlVagS~gw--~NYRHq-adv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~iDY 134 (494)
++++|+||+-+++- .+-+-. .|+-.+.++|++.||+ ++++ .
T Consensus 4 ~~r~ALIIGn~~Y~~~~~L~ga~~DA~~L~~~L~~lGF~---V~~l--~------------------------------- 47 (390)
T 3uoa_B 4 KDKVALLIGNMNYREHPKLKAPLVDVYELTNLLRQLDFK---VVSL--L------------------------------- 47 (390)
T ss_dssp SCEEEEEEECCCCSSSCCCSTHHHHHHHHHHHHHHTTCE---EEEE--E-------------------------------
T ss_pred CCCEEEEEEecCCCCcccCCChHHHHHHHHHHHHHcCCe---EEEe--e-------------------------------
Confidence 58999999988763 223322 7899999999999996 2221 1
Q ss_pred CCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC----CcccCCCCC-------CcCHHHHHHHHHH
Q 011066 135 TGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP----GVLGMPTSR-------YIYADELIDVLKK 203 (494)
Q Consensus 135 ~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~----g~l~fpd~~-------~L~a~dL~~~L~~ 203 (494)
++|.+++.+.|..-. + ...+.|.+++||+|||.. ++|.=.|.. .+..++|.+.|+.
T Consensus 48 ---DlT~~eI~~aL~~f~--------~--~~~~~D~~l~yfsGHG~~~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~l~~ 114 (390)
T 3uoa_B 48 ---DLTEYEMRNAVDEFL--------L--LLDKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQE 114 (390)
T ss_dssp ---SCCHHHHHHHHHHHH--------H--TCCTTCEEEEEEESCEEEETTEEEECCTTCCSSCCGGGSEEHHHHHHHHHH
T ss_pred ---cCCHHHHHHHHHHHH--------h--hCCCCCEEEEEEecCccccCCcceEEecCCCccccccceeeHHHHHHHHHh
Confidence 358889998887211 1 124679999999999954 454332332 3556666665554
Q ss_pred HHHcCCCceEEEEeccccccccccc------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchhhhhhhcc
Q 011066 204 KHASGNYKSLVFYLEACESGSIFEG------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWM 277 (494)
Q Consensus 204 m~~~~~Ykklv~~iEAC~SGSmf~~------llp~~~nV~~iTASn~~EsSya~yc~~~~~~~~~~~~tcLgD~fS~~wm 277 (494)
..-|..+|++|||+++..++. .+|...+++...|+.+++.||-..-++ .. |-+|+.+..
T Consensus 115 ----~~~K~kL~ILDACrg~~~~~~~~~~~~~ip~~ad~Li~yAT~pG~~A~r~~~d~-------~~----gS~FtqaL~ 179 (390)
T 3uoa_B 115 ----KETGLNVFLLDMCRKRNDYDDTIPILDALKVTANIVFGYATCQGAEAFEIQHSG-------LA----NGIFMKFLK 179 (390)
T ss_dssp ----TTCSEEEEEEESCCCCCTTCCCCCCCCCCCCCSCEEEEESSCTTCCCEECSSCT-------TC----CCHHHHHHT
T ss_pred ----cCCCceEEEEECCCCCCcccccccccccCcccCCcEEEEEcCCCcEeeecCCCC-------CC----CCHHHHHHH
Confidence 355778999999999755542 234555899999999999999753211 11 347777766
Q ss_pred ccccccccccccHHHHHHHHHhhcc
Q 011066 278 EDSDIHNLRTETLHQQYELVKTRTA 302 (494)
Q Consensus 278 edsd~~~l~~eTl~~qf~~vk~~t~ 302 (494)
+-... ..+|.++|..|.+++.
T Consensus 180 e~L~~----~~dl~~LLt~Vn~~Va 200 (390)
T 3uoa_B 180 DRLLE----DKKITVLLDEVAEDMG 200 (390)
T ss_dssp TTTTC----SSCHHHHHHHHHHHHT
T ss_pred HHHcc----CCCHHHHHHHHHHHHh
Confidence 54432 5789999999999986
No 5
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=95.78 E-value=0.028 Score=54.75 Aligned_cols=182 Identities=13% Similarity=0.173 Sum_probs=109.2
Q ss_pred CCeEEEEEeccCCCC----cchhhH--HHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcc
Q 011066 58 GTRWAVLLAGSNGFW----NYRHQA--DICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (494)
Q Consensus 58 ~~~wAVlVagS~gw~----NYRHqa--dv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~ 131 (494)
....|+||.=+++.. .-|..+ |+-.+-++|++.||. |..+.
T Consensus 15 ~rg~aLIInn~~f~~~~~l~~r~g~~~D~~~l~~~f~~LgF~-----V~~~~---------------------------- 61 (250)
T 2j32_A 15 EMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYE-----VRNKN---------------------------- 61 (250)
T ss_dssp EEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE----------------------------
T ss_pred CccEEEEEechhcCCCCCCcCCCCCHHHHHHHHHHHHHCCCE-----EEEEe----------------------------
Confidence 577999998887653 345554 899999999999995 22333
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCCC
Q 011066 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (494)
Q Consensus 132 iDY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~Y 210 (494)
++|.+.+...|.--. .+ .-...|-+++||.+||..|.+.--|+ .+.-++|.+.|..-+ ..-.=
T Consensus 62 ------dlt~~em~~~l~~~~-------~~--~~~~~d~~v~~~lsHG~~g~i~~~D~-~v~l~~i~~~f~~~~cp~L~g 125 (250)
T 2j32_A 62 ------DLTREEIVELMRDVS-------KE--DHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTG 125 (250)
T ss_dssp ------SCCHHHHHHHHHHHH-------TS--CCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTT
T ss_pred ------CCCHHHHHHHHHHHH-------Hh--hccCCCEEEEEECCCCCCCeEEecCC-cEEHHHHHHHhccccChhHcC
Confidence 568888888887211 11 11346778999999999987765565 465555555443200 00122
Q ss_pred ceEEEEeccccccccccc--------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchhhhhhhc
Q 011066 211 KSLVFYLEACESGSIFEG--------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAW 276 (494)
Q Consensus 211 kklv~~iEAC~SGSmf~~--------------llp~~~nV~~iTASn~~EsSya~yc~~~~~~~~~~~~tcLgD~fS~~w 276 (494)
|=-+|+|+||...-+-.+ .+|...++++.=|+-++.-||-. +.. |-+|.-..
T Consensus 126 KPKlf~iqACRg~~~~~g~~~~~~~~~~~~~~~ip~~aD~Li~ysT~pG~vs~r~----------~~~----gS~fiq~L 191 (250)
T 2j32_A 126 KPKLFIIQACRGTELDCGIATDSGVDDDMACHKIPVEADFLYAYSTAPGYYSWRN----------SKD----GSWFIQSL 191 (250)
T ss_dssp SCEEEEEESCSEEECBCCCCC----------CCCCTTTTEEEEESSCTEECCEEE----------TTT----EEHHHHHH
T ss_pred CCeEEEEecccCCcccCCccccCCccccccccccCCCCCEEEEEeCCCccEEecC----------CCC----CcHHHHHH
Confidence 345889999975432111 13444456666666666555543 111 22333322
Q ss_pred cccccccccccccHHHHHHHHHhhccC
Q 011066 277 MEDSDIHNLRTETLHQQYELVKTRTAS 303 (494)
Q Consensus 277 medsd~~~l~~eTl~~qf~~vk~~t~~ 303 (494)
.+-.. +.-..+.|.+.+..|.+++..
T Consensus 192 ~~~l~-~~~~~~dl~~ilt~V~~~V~~ 217 (250)
T 2j32_A 192 CAMLK-QYADKLEFMHILTRVNRKVAT 217 (250)
T ss_dssp HHHHH-HHTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHH-HhCCCCCHHHHHHHHHHHHHH
Confidence 22111 112356899999999888764
No 6
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=95.64 E-value=0.062 Score=53.36 Aligned_cols=183 Identities=13% Similarity=0.162 Sum_probs=111.7
Q ss_pred CCCeEEEEEeccCCCC----cchhhH--HHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCc
Q 011066 57 VGTRWAVLLAGSNGFW----NYRHQA--DICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGV 130 (494)
Q Consensus 57 ~~~~wAVlVagS~gw~----NYRHqa--dv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv 130 (494)
.....|+||.=+++-. .-|..+ |+-.+-++|++.||. |..+.
T Consensus 42 ~~rg~aLIInN~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~--------------------------- 89 (277)
T 4ehd_A 42 PEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYE-----VRNKN--------------------------- 89 (277)
T ss_dssp SEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE---------------------------
T ss_pred CCCCEEEEEEchhcCCcCCCCCCCCCHHHHHHHHHHHHHCCCE-----EEEec---------------------------
Confidence 3578999999888753 356665 899999999999995 33333
Q ss_pred cccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCC
Q 011066 131 PKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGN 209 (494)
Q Consensus 131 ~iDY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~ 209 (494)
++|.+.+..+|.--. .+ +-...|-++++|.+||..|.|.--|+. +.-++|.+.|..-. ..-.
T Consensus 90 -------dlt~~em~~~l~~f~-------~~--dh~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~ 152 (277)
T 4ehd_A 90 -------DLTREEIVELMRDVS-------KE--DHSKRSSFVCVLLSHGEEGIIFGTNGP-VDLKKITNFFRGDRCRSLT 152 (277)
T ss_dssp -------SCCHHHHHHHHHHHH-------TS--CCTTEEEEEEEEESCEETTEEEETTEE-EEHHHHHHTTSTTTCGGGT
T ss_pred -------CCCHHHHHHHHHHHH-------hh--cccCCCEEEEEEEcCCCCCEEEEeCCc-EeHHHHHHHhhhccCchhc
Confidence 568899998887311 11 123467888899999999987666663 66555555443200 0012
Q ss_pred CceEEEEeccccccccccc--------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchhhhhhh
Q 011066 210 YKSLVFYLEACESGSIFEG--------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIA 275 (494)
Q Consensus 210 Ykklv~~iEAC~SGSmf~~--------------llp~~~nV~~iTASn~~EsSya~yc~~~~~~~~~~~~tcLgD~fS~~ 275 (494)
-|=-+|+|+||...-+-.+ .+|...++++.=|+-++.-||-. +--|-+|.-.
T Consensus 153 gKPKlffiQACRG~~~~~g~~~~~~~~~~~~~~~ip~~aD~Li~yST~pG~vs~r~--------------~~~GS~fIq~ 218 (277)
T 4ehd_A 153 GKPKLFIIQACRGTELDCGIETDSGVDDDMACHKIPVEADFLYACSTAPGYYSWRN--------------SKDGSWFIQS 218 (277)
T ss_dssp TSCEEEEEESCCSSBCBCCCCC----------CCCCTTTTEEEEESSCTTBCCEEE--------------TTTEEHHHHH
T ss_pred CCccEEEEecCCCCcccCCccccCCccccccccccCCCCCEEEEEECCCCeEeecC--------------CCCCcHHHHH
Confidence 3455899999986543222 12333456666666665555532 1112233333
Q ss_pred ccccccccccccccHHHHHHHHHhhccC
Q 011066 276 WMEDSDIHNLRTETLHQQYELVKTRTAS 303 (494)
Q Consensus 276 wmedsd~~~l~~eTl~~qf~~vk~~t~~ 303 (494)
..+-... .-..+.|.+++..|.+++..
T Consensus 219 L~~~l~~-~~~~~dl~~ilt~V~~~V~~ 245 (277)
T 4ehd_A 219 LCAMLKQ-YADKLEFMHILTRVNRKVAT 245 (277)
T ss_dssp HHHHHHH-HTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HCCCCCHHHHHHHHHHHHHH
Confidence 3222211 11346899999999888863
No 7
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=95.53 E-value=0.041 Score=54.40 Aligned_cols=181 Identities=17% Similarity=0.215 Sum_probs=109.6
Q ss_pred CCeEEEEEeccCCCC---cchhh--HHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCccc
Q 011066 58 GTRWAVLLAGSNGFW---NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPK 132 (494)
Q Consensus 58 ~~~wAVlVagS~gw~---NYRHq--adv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~i 132 (494)
....|+||.=+++-. .-|.. .|+-.+-++|++.||. |..+.
T Consensus 31 ~rg~aLIInn~~f~~~~l~~R~g~~~Da~~L~~~f~~LGF~-----V~~~~----------------------------- 76 (272)
T 1m72_A 31 HRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFK-----VTVFP----------------------------- 76 (272)
T ss_dssp EEEEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE-----------------------------
T ss_pred CCCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCE-----EEEec-----------------------------
Confidence 478999998776542 23444 6789999999999994 23333
Q ss_pred cCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCCCc
Q 011066 133 DYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNYK 211 (494)
Q Consensus 133 DY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~Yk 211 (494)
++|.+.+...|.--. .+ +-...|-+++||.+||..|+|.--|+. +.-++|.+.|..-. ..-.=|
T Consensus 77 -----dlt~~em~~~l~~~~-------~~--dh~~~d~~v~~~lsHG~~~~i~~~D~~-v~l~~i~~~f~~~~cpsL~gK 141 (272)
T 1m72_A 77 -----NLKSEEINKFIQQTA-------EM--DHSDADCLLVAVLTHGELGMLYAKDTH-YKPDNLWYYFTADKCPTLAGK 141 (272)
T ss_dssp -----SCCHHHHHHHHHHHH-------TS--CCTTEEEEEEEEESCEETTEEECSSSE-ECTTHHHHTTSTTTCGGGTTS
T ss_pred -----CcCHHHHHHHHHHHH-------Hh--hcCCCCEEEEEEcCCCCCCEEEecCCc-EEHHHHHHHhccccChhhcCC
Confidence 568888888887311 01 113467889999999999988776764 66666666553210 001223
Q ss_pred eEEEEeccccccccccc----------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchhhhhhh
Q 011066 212 SLVFYLEACESGSIFEG----------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIA 275 (494)
Q Consensus 212 klv~~iEAC~SGSmf~~----------------llp~~~nV~~iTASn~~EsSya~yc~~~~~~~~~~~~tcLgD~fS~~ 275 (494)
=-+|+|+||...-+-.+ .+|...++++.=|+-++.-||-. +.. |-+|.-.
T Consensus 142 PKlffiqACRg~~~~~g~~~~~~~~d~~~~~~~~iP~~aD~Li~ysT~pG~vs~r~----------~~~----GS~fiq~ 207 (272)
T 1m72_A 142 PKLFFIQACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRN----------TTR----GSWFMQA 207 (272)
T ss_dssp CEEEEEESCSSSBCBCCEEEEC---------CEEECTTCSEEEEESSCTTBCCEEE----------TTT----EEHHHHH
T ss_pred ceEEEEeCCCCCcccCCccccccccccccccccccCCCCCEEEEEeCCCCcEeecC----------CCC----CCHHHHH
Confidence 45888999985333111 13433466666666666666543 111 2233333
Q ss_pred ccccccccccccccHHHHHHHHHhhcc
Q 011066 276 WMEDSDIHNLRTETLHQQYELVKTRTA 302 (494)
Q Consensus 276 wmedsd~~~l~~eTl~~qf~~vk~~t~ 302 (494)
..+... +.-..+.|.+.+..|.+++.
T Consensus 208 L~~~l~-~~~~~~dl~~ilt~V~~~V~ 233 (272)
T 1m72_A 208 LCEELR-YAGTERDILTLLTFVCQKVA 233 (272)
T ss_dssp HHHHHH-HHTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHH-hhCCCCCHHHHHHHHHHHHH
Confidence 322221 11234689999999998886
No 8
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=95.28 E-value=0.11 Score=50.78 Aligned_cols=179 Identities=16% Similarity=0.221 Sum_probs=104.0
Q ss_pred CCeEEEEEeccCCCC---cchhh--HHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCccc
Q 011066 58 GTRWAVLLAGSNGFW---NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPK 132 (494)
Q Consensus 58 ~~~wAVlVagS~gw~---NYRHq--adv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~i 132 (494)
....|+||.=.++-. .-|.- .|+-.+-++|++.||. |..+.
T Consensus 19 ~rg~aLIInn~~f~~~~l~~R~G~~~D~~~L~~~f~~LGF~-----V~~~~----------------------------- 64 (259)
T 3sir_A 19 NRGMALIFNHEHFEVPTLKSRAGTNVDCENLTRVLKQLDFE-----VTVYK----------------------------- 64 (259)
T ss_dssp EEEEEEEEEECCC-----------CCHHHHHHHHHHHTTCE-----EEEEE-----------------------------
T ss_pred CccEEEEEeccccCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEe-----------------------------
Confidence 468999999888753 34555 6899999999999996 33333
Q ss_pred cCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHHHcC----
Q 011066 133 DYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASG---- 208 (494)
Q Consensus 133 DY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~~~~---- 208 (494)
++|.+.+..+|.-- . .+ +-...|-+++||.+||..|.|.=-|+. + .|.+.++.+...+
T Consensus 65 -----dlt~~em~~~l~~~-~------~~--~h~~~d~~v~~~lsHG~~g~i~~~D~~-v---~l~~i~~~f~~~~cpsL 126 (259)
T 3sir_A 65 -----DCRYKDILRTIEYS-A------SQ--NHSDSDCILVAILSHGEMGYIYAKDTQ-Y---KLDNIWSFFTANHCPSL 126 (259)
T ss_dssp -----ECSHHHHHHHHHHH-H------TS--CCTTEEEEEEEEEECTTCCCCCCTTHH-H---HHHHTTGGGSTTTCGGG
T ss_pred -----CCCHHHHHHHHHHH-H------Hh--hccCCCEEEEEEecCCCCCeEEeCCCc-E---EHHHHHHHhhhccCccc
Confidence 56888898888731 1 01 124468899999999999877433332 2 3444444443211
Q ss_pred CCceEEEEeccccccccccc------------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchh
Q 011066 209 NYKSLVFYLEACESGSIFEG------------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGD 270 (494)
Q Consensus 209 ~Ykklv~~iEAC~SGSmf~~------------------llp~~~nV~~iTASn~~EsSya~yc~~~~~~~~~~~~tcLgD 270 (494)
.=|=-+|+|+||...-+-.+ .+|...++++.=|+-++.-||-. +--|-
T Consensus 127 ~gKPKlf~iQACRG~~~~~g~~~~~~~~~~dg~~~~~~~ip~~aD~Li~yST~pG~vs~r~--------------~~~GS 192 (259)
T 3sir_A 127 AGKPKLFFIQACQGDRLDGGVTMQRSQTETDGDSSMSYKIPVHADFLIAYSTVPGFYSWRN--------------TTRGS 192 (259)
T ss_dssp SSSCEEEEEEEETTSCEEC-----------------CEECCCCTTEEEEEEEECCSCCCSS--------------CCCSC
T ss_pred cCCCCEEEEecCCCCcccCCcccccCcccccCcccccccCCCCCCEEEEEECCCCeEeecC--------------CCCCc
Confidence 22455899999986543222 12333355555555555555532 11122
Q ss_pred hhhhhccccccccccccccHHHHHHHHHhhccC
Q 011066 271 LYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (494)
Q Consensus 271 ~fS~~wmedsd~~~l~~eTl~~qf~~vk~~t~~ 303 (494)
+|.-...+-... .-..+.|.+++..|.+++..
T Consensus 193 ~fiq~L~~~l~~-~~~~~dl~~ilt~V~~~V~~ 224 (259)
T 3sir_A 193 WFMQSLCAELAA-NGKRLDILTLLTFVCQRVAV 224 (259)
T ss_dssp HHHHHHHHHHHH-HTTTSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHH
Confidence 333333222211 12346899999999998874
No 9
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=95.23 E-value=0.034 Score=55.99 Aligned_cols=182 Identities=15% Similarity=0.196 Sum_probs=108.8
Q ss_pred CCeEEEEEeccCCCCc----chhh--HHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcc
Q 011066 58 GTRWAVLLAGSNGFWN----YRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (494)
Q Consensus 58 ~~~wAVlVagS~gw~N----YRHq--adv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~ 131 (494)
....|+||.=+++..+ -|.. .|+-.+-++|++.||. |..+.
T Consensus 68 ~rg~aLIInN~~f~~~~~L~~R~G~~~Da~~L~~~f~~LGF~-----V~~~~---------------------------- 114 (305)
T 1f1j_A 68 KLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFD-----VIVYN---------------------------- 114 (305)
T ss_dssp EEEEEEEEECCCCCTTTTCCCCTTHHHHHHHHHHHHHHHTEE-----EEEEE----------------------------
T ss_pred CCCEEEEEechhcCCCccCccCCCcHHHHHHHHHHHHHCCCE-----EEEec----------------------------
Confidence 5779999988877632 3544 6899999999999994 22222
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCCC
Q 011066 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (494)
Q Consensus 132 iDY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~Y 210 (494)
++|.+.+...|.- .. .+ . -...|-+++||.+||..|+|.--|+ .+.-++|.+.|.--. ..-.=
T Consensus 115 ------dlt~~em~~~l~~-~~------~~-~-h~~~d~~vv~ilsHG~~~~i~g~D~-~v~l~~I~~~f~~~~CpsL~g 178 (305)
T 1f1j_A 115 ------DCSCAKMQDLLKK-AS------EE-D-HTNAACFACILLSHGEENVIYGKDG-VTPIKDLTAHFRGDRSKTLLE 178 (305)
T ss_dssp ------SCCHHHHHHHHHH-HH------HS-C-GGGEEEEEEEEESCEETTEEECSSS-EEEHHHHHHTTSTTTCGGGTT
T ss_pred ------CcCHHHHHHHHHH-HH------Hh-h-cCCCCEEEEEEecCCCCCeEEecCC-eEEHHHHHHHhhhccChhhcC
Confidence 5688888888873 11 11 1 1235778899999999997766665 366566554443100 00012
Q ss_pred ceEEEEeccccccccccc-----------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchhhhh
Q 011066 211 KSLVFYLEACESGSIFEG-----------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYS 273 (494)
Q Consensus 211 kklv~~iEAC~SGSmf~~-----------------llp~~~nV~~iTASn~~EsSya~yc~~~~~~~~~~~~tcLgD~fS 273 (494)
|=-+|+|+||...-+-.+ .+|...++++.=|+.++.-||-. +.. |-+|.
T Consensus 179 KPKlffiQACRG~~~~~g~~~~~~~~~~~~~~~~~~ip~~aD~LiayST~pG~vs~r~----------~~~----GS~Fi 244 (305)
T 1f1j_A 179 KPKLFFIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRS----------PGR----GSWFV 244 (305)
T ss_dssp SCEEEEEESCCSSBCBCCBC---------------CBCTTTTEEEEESSCTTBCCEEE----------TTT----EEHHH
T ss_pred CceEEEeccccCCcccCCccccCCcccccccccccccCCCCCEEEEEECCCCeeccCC----------CCC----CCHHH
Confidence 445889999976543222 13333456666666666555532 111 22333
Q ss_pred hhccccccccccccccHHHHHHHHHhhccC
Q 011066 274 IAWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (494)
Q Consensus 274 ~~wmedsd~~~l~~eTl~~qf~~vk~~t~~ 303 (494)
-...+-.. +.-..+.|.+.|..|.+++..
T Consensus 245 qaL~~~l~-~~~~~~dl~~ilt~Vn~~V~~ 273 (305)
T 1f1j_A 245 QALCSILE-EHGKDLEIMQILTRVNDRVAR 273 (305)
T ss_dssp HHHHHHHH-HHTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hhCCCCCHHHHHHHHHHHHHH
Confidence 33222111 112346899999999888864
No 10
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=94.81 E-value=0.17 Score=50.08 Aligned_cols=120 Identities=18% Similarity=0.245 Sum_probs=80.6
Q ss_pred CCCeEEEEEeccCCCC----cchhh--HHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCc
Q 011066 57 VGTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGV 130 (494)
Q Consensus 57 ~~~~wAVlVagS~gw~----NYRHq--adv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv 130 (494)
.....|+||.=.++-. .-|.. .|+-.+-++|++.||. |..+.
T Consensus 19 ~~rg~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~--------------------------- 66 (278)
T 3od5_A 19 RRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFE-----VKCFN--------------------------- 66 (278)
T ss_dssp SBCCEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE---------------------------
T ss_pred CCcCEEEEEeccccCCCCCCCCCCCCHHHHHHHHHHHHHCCCE-----EEEec---------------------------
Confidence 3578999999888753 34554 5789999999999994 33333
Q ss_pred cccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCC
Q 011066 131 PKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGN 209 (494)
Q Consensus 131 ~iDY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~ 209 (494)
++|.+.+..+|.- .. .+ +-...|-++++|.+||..|.|.--|+. +.-++|.+.|..-. ..-.
T Consensus 67 -------dlt~~em~~~l~~-~~------~~--~h~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~ 129 (278)
T 3od5_A 67 -------DLKAEELLLKIHE-VS------TV--SHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLV 129 (278)
T ss_dssp -------SCCHHHHHHHHHH-HH------HS--CCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHHTTSTTTCGGGT
T ss_pred -------CCCHHHHHHHHHH-HH------hh--cccCCCEEEEEEECCCCCCEEEEeCCe-EEHHHHHHHhccccChhhc
Confidence 5688999998873 11 01 113467788889999999987766765 66666665554200 0012
Q ss_pred CceEEEEecccccccc
Q 011066 210 YKSLVFYLEACESGSI 225 (494)
Q Consensus 210 Ykklv~~iEAC~SGSm 225 (494)
=|=-+|+|+||...-+
T Consensus 130 gKPKlffiQACRG~~~ 145 (278)
T 3od5_A 130 GKPKIFIIQACRGNQH 145 (278)
T ss_dssp TSCEEEEEESCCSSBC
T ss_pred CCCcEEEEecCCCCcc
Confidence 3445889999986543
No 11
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=94.62 E-value=0.19 Score=49.53 Aligned_cols=184 Identities=16% Similarity=0.189 Sum_probs=109.4
Q ss_pred CCeEEEEEeccCCCC-----------cchhh--HHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCC
Q 011066 58 GTRWAVLLAGSNGFW-----------NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGD 124 (494)
Q Consensus 58 ~~~wAVlVagS~gw~-----------NYRHq--adv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~ 124 (494)
....|+||.=.++-. .-|.. .|+-.+-++|++.||. |..+.
T Consensus 16 ~rG~aLIInn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~--------------------- 69 (271)
T 3h11_B 16 PRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFE-----IKPHD--------------------- 69 (271)
T ss_dssp SCCEEEEEECCCCSHHHHTCGGGTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE---------------------
T ss_pred CCCEEEEEEchhcCcccccccccccCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEe---------------------
Confidence 468999999877653 34555 5799999999999995 33333
Q ss_pred CccCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHH
Q 011066 125 DVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKK 204 (494)
Q Consensus 125 dvY~gv~iDY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m 204 (494)
++|.+.+..+|.--.. + +-...|-++++|.+||..|.|.--|+..+.-++|.+.|..-
T Consensus 70 -------------dlt~~em~~~l~~~~~-------~--~h~~~d~~v~~ilSHG~~g~i~g~D~~~v~l~~I~~~f~~~ 127 (271)
T 3h11_B 70 -------------DCTVEQIYEILKIYQL-------M--DHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGL 127 (271)
T ss_dssp -------------SCCHHHHHHHHHHHHH-------S--CCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTT
T ss_pred -------------CCCHHHHHHHHHHHHH-------h--cCCCCCEEEEEEEcCCcCCEEEecCCCeecHHHHHHHhhhc
Confidence 5688899888873110 1 11346778888899999998876676556556655554320
Q ss_pred H-HcCCCceEEEEeccccccccccc-----------------------cCCCCCcEEEEeecCCCCccccccCCCCCCCC
Q 011066 205 H-ASGNYKSLVFYLEACESGSIFEG-----------------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGP 260 (494)
Q Consensus 205 ~-~~~~Ykklv~~iEAC~SGSmf~~-----------------------llp~~~nV~~iTASn~~EsSya~yc~~~~~~~ 260 (494)
. ..-.=|=-+|+|.||...-+-.+ .+|...++++.=|+-++--||-.
T Consensus 128 ~CpsL~gKPKlffiQACRG~~~~~gv~~~~~~~~~~~~e~d~~~~~~~~iP~~aD~Li~yST~pG~vs~R~--------- 198 (271)
T 3h11_B 128 KCPSLAGKPKVFFIQACQGDNYQKGIPVETASEEQPYLEMALSSPQTRYIPDEADFLLGMATVNNCVSYRN--------- 198 (271)
T ss_dssp TCGGGTTSCEEEEEESCCSSBCC----------------------CCCCSCSSSSEEEEESSCTTBCCEEE---------
T ss_pred cChhhcCCccEEEEeccCCCcccCCceeccCCccccccccccccccccccCCCCceEEEEECCCCceeecC---------
Confidence 0 00123445899999976433111 13333355555555555555532
Q ss_pred CCCccccchhhhhhhccccccccccccccHHHHHHHHHhhccC
Q 011066 261 PPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVKTRTAS 303 (494)
Q Consensus 261 ~~~~~tcLgD~fS~~wmedsd~~~l~~eTl~~qf~~vk~~t~~ 303 (494)
+.. |-+|--...+-.....-..+.|.++|..|.+++..
T Consensus 199 -~~~----GS~fIq~L~~~l~~~~~~~~dl~~ilt~Vn~~V~~ 236 (271)
T 3h11_B 199 -PAE----GTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSN 236 (271)
T ss_dssp -TTT----EEHHHHHHHHHHHHHGGGTCCHHHHHHHHHHHHHT
T ss_pred -CCC----CcHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhh
Confidence 111 22333222221111111156899999999998874
No 12
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=94.54 E-value=0.12 Score=52.14 Aligned_cols=181 Identities=17% Similarity=0.205 Sum_probs=108.3
Q ss_pred CCeEEEEEeccCCCC---cchhh--HHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCccc
Q 011066 58 GTRWAVLLAGSNGFW---NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPK 132 (494)
Q Consensus 58 ~~~wAVlVagS~gw~---NYRHq--adv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~i 132 (494)
....|+||.=+++-. .-|.. .|+-.+-++|++.||. |..+.
T Consensus 59 ~rg~aLIInN~~F~~~~l~~R~Gt~~Da~~L~~~f~~LGF~-----V~~~~----------------------------- 104 (310)
T 2nn3_C 59 HRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFK-----VTVFP----------------------------- 104 (310)
T ss_dssp BCCEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE-----------------------------
T ss_pred CcCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCE-----EEEec-----------------------------
Confidence 478999998776542 23444 6789999999999994 23333
Q ss_pred cCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCCCc
Q 011066 133 DYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNYK 211 (494)
Q Consensus 133 DY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~Yk 211 (494)
++|.+.+..+|.--. .+ +-...|-+++||.+||..|+|.--|+. +.-++|.+.|..-. ..-.=|
T Consensus 105 -----dlt~~em~~~l~~f~-------~~--dh~~~D~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~gK 169 (310)
T 2nn3_C 105 -----NLKSEEINKFIQQTA-------EM--DHSDADCLLVAVLTAGELGMLYAKDTH-YKPDNLWYYFTADKCPTLAGK 169 (310)
T ss_dssp -----SCCHHHHHHHHHHHH-------SS--CGGGBSCEEEEEEEEEETTEEECSSCE-ECTHHHHGGGSTTTCGGGTTS
T ss_pred -----CCCHHHHHHHHHHHH-------Hh--ccCCCCEEEEEEeCCCCCCEEEecCCc-EEHHHHHHHhccccChhhcCC
Confidence 568888888887311 01 112357788899999999988766764 66666665553200 001224
Q ss_pred eEEEEeccccccccccc----------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCccccchhhhhhh
Q 011066 212 SLVFYLEACESGSIFEG----------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIA 275 (494)
Q Consensus 212 klv~~iEAC~SGSmf~~----------------llp~~~nV~~iTASn~~EsSya~yc~~~~~~~~~~~~tcLgD~fS~~ 275 (494)
=-+|+|+||...-+-.+ .+|...++++.=|+-++.-||-. +--|-+|.-.
T Consensus 170 PKlffiQACRG~~~d~g~~~~~~~~d~~~~~~~~iP~~aD~LiayST~pG~vS~R~--------------~~~GSwFIqa 235 (310)
T 2nn3_C 170 PKLFFIQACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRN--------------TTRGSWFMQA 235 (310)
T ss_dssp CEEEEEEEECCCCCCCCC-------------CCCCCCSTTEEEEECCCCCEEESSS--------------SEEEEHHHHH
T ss_pred ceEEEEecccCCccccCccccccccccccccccccCCCCCEEEEEeCCCCceeecC--------------CCCCCHHHHH
Confidence 45889999976433111 13333356666565555554432 1123344333
Q ss_pred ccccccccccccccHHHHHHHHHhhcc
Q 011066 276 WMEDSDIHNLRTETLHQQYELVKTRTA 302 (494)
Q Consensus 276 wmedsd~~~l~~eTl~~qf~~vk~~t~ 302 (494)
..+... +.-..+.|.+++..|.+++.
T Consensus 236 L~~~l~-~~~~~~dl~~ilt~Vn~~V~ 261 (310)
T 2nn3_C 236 LCEELR-YAGTERDILTLLTFVCQKVA 261 (310)
T ss_dssp HHHHHH-TTTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHH-hhCCCCCHHHHHHHHHHHHH
Confidence 332222 12234689999999988886
No 13
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=94.23 E-value=0.68 Score=46.42 Aligned_cols=122 Identities=18% Similarity=0.203 Sum_probs=76.1
Q ss_pred CCCeEEEEEeccCCCC-cchh--hHHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcccc
Q 011066 57 VGTRWAVLLAGSNGFW-NYRH--QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKD 133 (494)
Q Consensus 57 ~~~~wAVlVagS~gw~-NYRH--qadv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~iD 133 (494)
.+.+.|+||.=+++-. .-|. ..|+-.+-++|++.||. |..+.
T Consensus 58 ~~~r~aLII~N~~f~~l~~R~G~~~Da~~L~~~f~~LGF~-----V~~~~------------------------------ 102 (302)
T 3e4c_A 58 SRTRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYS-----VDVKK------------------------------ 102 (302)
T ss_dssp TCCCEEEEEECCSCSSSCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE------------------------------
T ss_pred CCccEEEEEECcCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEee------------------------------
Confidence 3578999999887531 2233 36899999999999996 33333
Q ss_pred CCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCC-----CCcCHHHHHHHHHHHH-Hc
Q 011066 134 YTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTS-----RYIYADELIDVLKKKH-AS 207 (494)
Q Consensus 134 Y~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~-----~~L~a~dL~~~L~~m~-~~ 207 (494)
++|.+.+...|.--.. + .+-...|-+++||.+||..|.|.=-|. ..+.-++|.+.|..-+ ..
T Consensus 103 ----dlt~~em~~~l~~f~~-------~-~dh~~~d~~vv~~lsHG~~~~i~g~D~~~~~~~~v~l~~I~~~F~~~~Cps 170 (302)
T 3e4c_A 103 ----NLTASDMTTELEAFAH-------R-PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPS 170 (302)
T ss_dssp ----SCCHHHHHHHHHHHHT-------C-GGGGGCSCEEEEEEEEEETTEEECTTCCSSSCCEECHHHHHHHTSTTTCGG
T ss_pred ----CCCHHHHHHHHHHHHh-------h-hccCCCCEEEEEEeccCcCCeEEeecccccCCcEEEHHHHHHHHhhhcchh
Confidence 5688999998873110 1 111235668888999999886533232 3355555555543210 00
Q ss_pred CCCceEEEEecccccccc
Q 011066 208 GNYKSLVFYLEACESGSI 225 (494)
Q Consensus 208 ~~Ykklv~~iEAC~SGSm 225 (494)
-.=|=-+|+|+||...-.
T Consensus 171 L~gKPKlffIQACRG~~~ 188 (302)
T 3e4c_A 171 LKDKPKVIIIQAARGDSP 188 (302)
T ss_dssp GTTSCEEEEEEEECSSSC
T ss_pred hcCCccEEEEECCCCCCC
Confidence 023445889999986543
No 14
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=93.93 E-value=0.33 Score=45.16 Aligned_cols=120 Identities=18% Similarity=0.235 Sum_probs=75.8
Q ss_pred CCeEEEEEeccCCCC-cchhh--HHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCccccC
Q 011066 58 GTRWAVLLAGSNGFW-NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDY 134 (494)
Q Consensus 58 ~~~wAVlVagS~gw~-NYRHq--adv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~iDY 134 (494)
+...|+||.=+++-. .-|.- .|+-.+-++|++.||. + ..+.
T Consensus 42 ~~g~ALIInn~~f~~~~~R~G~~~Da~~L~~~f~~LgF~---V--~~~~------------------------------- 85 (178)
T 2h54_A 42 RTRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYS---V--DVKK------------------------------- 85 (178)
T ss_dssp CCCEEEEEECCCCSSSCCCTTHHHHHHHHHHHHHHTTCE---E--EEEE-------------------------------
T ss_pred cCCEEEEEehhhcCCCccCCCCHHHHHHHHHHHHHCCCE---E--EEec-------------------------------
Confidence 468999998887521 23433 6799999999999995 2 2222
Q ss_pred CCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCC-----CCcCHHHHHHHHHHHH-HcC
Q 011066 135 TGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTS-----RYIYADELIDVLKKKH-ASG 208 (494)
Q Consensus 135 ~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~-----~~L~a~dL~~~L~~m~-~~~ 208 (494)
++|.+.+...|.-=. .+ .+-...|-+++||.+||..|.|.-.|+ +.+.-++|.+.|..-. ..-
T Consensus 86 ---dlt~~em~~~l~~f~-------~~-~d~~~~d~~v~~~lsHG~~g~i~g~D~~~~~~~~v~l~~I~~~f~~~~CpsL 154 (178)
T 2h54_A 86 ---NLTASDMTTELEAFA-------HR-PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSL 154 (178)
T ss_dssp ---SCCHHHHHHHHHHHH-------TC-GGGGGCSCEEEEEESCBCSSCEECTTCCSSSCCEECHHHHHHHHSTTTCGGG
T ss_pred ---CCCHHHHHHHHHHHH-------hh-hhcCCCCEEEEEEecCCCCCeEEeecCCcccCcEEEHHHHHHHHhhcCChhh
Confidence 468889998887210 01 111235678888899999987665555 2355555555543210 000
Q ss_pred CCceEEEEeccccccc
Q 011066 209 NYKSLVFYLEACESGS 224 (494)
Q Consensus 209 ~Ykklv~~iEAC~SGS 224 (494)
.=|--+|+|+||..+-
T Consensus 155 ~gKPKlffiqACRg~~ 170 (178)
T 2h54_A 155 KDKPKVIIIQACRGDS 170 (178)
T ss_dssp TTSCEEEEEESCSSSB
T ss_pred cCCceEEEEECCCCCC
Confidence 2345688999999854
No 15
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=93.72 E-value=0.46 Score=46.74 Aligned_cols=118 Identities=14% Similarity=0.188 Sum_probs=73.7
Q ss_pred CCeEEEEEeccCCCC----cchhh--HHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcc
Q 011066 58 GTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (494)
Q Consensus 58 ~~~wAVlVagS~gw~----NYRHq--adv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~ 131 (494)
....|+||.=.++-. .-|.. .|+-.+-++|++.||. |..+.
T Consensus 20 ~rg~aLIInn~~f~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~---------------------------- 66 (277)
T 1nw9_B 20 PCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFM-----VEVKG---------------------------- 66 (277)
T ss_dssp SCEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTEE-----EEEEE----------------------------
T ss_pred cccEEEEEeCcccCCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEc----------------------------
Confidence 467999998777643 34554 5789999999999984 22333
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC-------CcccCCCCCCcCHHHHHHHHHHH
Q 011066 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP-------GVLGMPTSRYIYADELIDVLKKK 204 (494)
Q Consensus 132 iDY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~-------g~l~fpd~~~L~a~dL~~~L~~m 204 (494)
++|.+.+..+|.-- . .+ .. ...|-++++|.+||.. |.+.--|+..+.-++|.+.|..-
T Consensus 67 ------dlt~~em~~~l~~~-~------~~-~h-~~~D~~vv~ilSHG~~~~~~~~~g~iy~~D~~~v~l~~i~~~f~~~ 131 (277)
T 1nw9_B 67 ------DLTAKKMVLALLEL-A------RQ-DH-GALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGT 131 (277)
T ss_dssp ------SCCHHHHHHHHHHH-H------HS-CC-TTCSEEEEEEEEEEECCCCSSSCCEEECTTSCEEEHHHHHHTTCTT
T ss_pred ------CCCHHHHHHHHHHH-H------Hh-hc-ccCCeEEEEEeCCCCccccccCCCcEEecCCceeeHHHHHHHhccc
Confidence 56888888888721 1 01 11 2357788888899987 66654455445555655544310
Q ss_pred H-HcCCCceEEEEecccccc
Q 011066 205 H-ASGNYKSLVFYLEACESG 223 (494)
Q Consensus 205 ~-~~~~Ykklv~~iEAC~SG 223 (494)
. ..-.=|=-+|+|+||...
T Consensus 132 ~CpsL~gKPKlffiQACRG~ 151 (277)
T 1nw9_B 132 SCPSLGGKPKLFFIQACGGE 151 (277)
T ss_dssp TCGGGTTSCEEEEEEEEC--
T ss_pred CChhHcCCCcEEEEeccCCC
Confidence 0 001224458899999754
No 16
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster}
Probab=92.53 E-value=0.63 Score=46.92 Aligned_cols=119 Identities=11% Similarity=0.119 Sum_probs=76.2
Q ss_pred CCeEEEEEeccCCCC--cchhh--HHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcccc
Q 011066 58 GTRWAVLLAGSNGFW--NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKD 133 (494)
Q Consensus 58 ~~~wAVlVagS~gw~--NYRHq--adv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~iD 133 (494)
....|+||.=.++-. .-|.. .|+-.+-++|++.||. |.++.
T Consensus 60 ~rg~aLIInN~~F~~~~~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~------------------------------ 104 (316)
T 2fp3_A 60 NRGVLLMVNIMDYPDQNRRRIGAEKDSKSLIHLFQELNFT-----IFPYG------------------------------ 104 (316)
T ss_dssp CSEEEEEEECCCCSSTTSCCTTHHHHHHHHHHHHHHTTEE-----EEEEC------------------------------
T ss_pred CCcEEEEEeCcccCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEcc------------------------------
Confidence 578999998776541 34554 6789999999999994 33333
Q ss_pred CCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC----CcccCCCCCCcCHHHHHHHHHHHH-HcC
Q 011066 134 YTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP----GVLGMPTSRYIYADELIDVLKKKH-ASG 208 (494)
Q Consensus 134 Y~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~----g~l~fpd~~~L~a~dL~~~L~~m~-~~~ 208 (494)
++|.+.+..+|.--. .+ ..++..|-++++|.+||.. |.|.--|+..+.-++|.+.|..-. ..-
T Consensus 105 ----dlt~~em~~~l~~f~-------~~-~h~~~~D~~vv~ilSHG~~~~g~g~i~g~D~~~v~l~~I~~~f~~~~CpsL 172 (316)
T 2fp3_A 105 ----NVNQDQFFKLLTMVT-------SS-SYVQNTECFVMVLMTHGNSVEGKEKVEFRDGSVVDMQKIKDHFQTAKCPYL 172 (316)
T ss_dssp ----SCCHHHHHHHHHHHH-------TS-HHHHTCSCEEEEEESCEECCTTCCEEECTTSCEEEHHHHHHTTSTTTCGGG
T ss_pred ----CCCHHHHHHHHHHHH-------HH-hhcCCCCEEEEEEccCCCccCCCCEEEeecCcEEeHHHHHHHhccccChhh
Confidence 568888888887211 11 1121467788899999998 887776776466666655543210 001
Q ss_pred CCceEEEEecccccc
Q 011066 209 NYKSLVFYLEACESG 223 (494)
Q Consensus 209 ~Ykklv~~iEAC~SG 223 (494)
.=|=-+|+|+||...
T Consensus 173 ~gKPKlffiQACRG~ 187 (316)
T 2fp3_A 173 VNKPKVLMFPFARGD 187 (316)
T ss_dssp TTSCEEEEESCC---
T ss_pred cCCceEEEEecCCCC
Confidence 234458899999764
No 17
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=85.41 E-value=3.9 Score=37.48 Aligned_cols=121 Identities=16% Similarity=0.209 Sum_probs=81.8
Q ss_pred CCeEEEEEeccCCCC----cchhhH--HHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcc
Q 011066 58 GTRWAVLLAGSNGFW----NYRHQA--DICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (494)
Q Consensus 58 ~~~wAVlVagS~gw~----NYRHqa--dv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~ 131 (494)
....|+||.=.++-. ..|.-+ |+-.+.+++++.||. |..+.
T Consensus 32 ~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~---------------------------- 78 (167)
T 1pyo_A 32 PRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYD-----VHVLC---------------------------- 78 (167)
T ss_dssp SSEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEE-----EEEEE----------------------------
T ss_pred CceEEEEEeCcccCCCCCCccCCCcHHHHHHHHHHHHHCCCE-----EEEee----------------------------
Confidence 578999998776532 346655 899999999999994 23333
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCCC
Q 011066 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (494)
Q Consensus 132 iDY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~Y 210 (494)
++|.+.+...|+--. .+ .+-...|-.++++.+||..|.|.-.|+..+.-++|.+.|.--+ ..-.=
T Consensus 79 ------dlt~~em~~~l~~~~-------~~-~dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~l~~i~~~F~~~~CpsL~g 144 (167)
T 1pyo_A 79 ------DQTAQEMQEKLQNFA-------QL-PAHRVTDSCIVALLSHGVEGAIYGVDGKLLQLQEVFQLFDNANCPSLQN 144 (167)
T ss_dssp ------SCCHHHHHHHHHHHH-------TC-GGGGTSSEEEEEEESCEETTEEECTTSCEEEHHHHHHHTSTTTCGGGTT
T ss_pred ------CCCHHHHHHHHHHhh-------hh-hhccCCCEEEEEeCCCCCCCeEEEeCCCEEcHHHHHHHhcccCChhHcC
Confidence 568888888887211 00 0112367889999999999988877876577677766654200 00123
Q ss_pred ceEEEEecccccccc
Q 011066 211 KSLVFYLEACESGSI 225 (494)
Q Consensus 211 kklv~~iEAC~SGSm 225 (494)
|=-+|+|.||...-.
T Consensus 145 KPKlffiQACRG~~~ 159 (167)
T 1pyo_A 145 KPKMFFIQACRGDET 159 (167)
T ss_dssp SCEEEEEESCSSSBC
T ss_pred CCeEEEEECCCCCCC
Confidence 445899999987543
No 18
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=82.33 E-value=2.2 Score=38.32 Aligned_cols=119 Identities=14% Similarity=0.203 Sum_probs=79.0
Q ss_pred CCeEEEEEeccCCCC----cchhhH--HHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcc
Q 011066 58 GTRWAVLLAGSNGFW----NYRHQA--DICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (494)
Q Consensus 58 ~~~wAVlVagS~gw~----NYRHqa--dv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~ 131 (494)
..-.|+||.=.++-. .-|.-+ |+-.+-+++++.|+. |..+.
T Consensus 15 ~rG~alIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~---------------------------- 61 (146)
T 2dko_A 15 EMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYE-----VRNKN---------------------------- 61 (146)
T ss_dssp EEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE----------------------------
T ss_pred CceEEEEEeccccCCCCCcccCCCCHHHHHHHHHHHHHCCCE-----EEEee----------------------------
Confidence 466899997776542 346665 889999999999996 33333
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCCC
Q 011066 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (494)
Q Consensus 132 iDY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~Y 210 (494)
++|.+.+..+|+--. .+ +-...|-+++++.+||..|.|.-.|+ .+.-++|.+.|.--+ ..-.=
T Consensus 62 ------dlt~~em~~~l~~~~-------~~--dh~~~dc~vv~ilSHG~~g~i~g~D~-~~~l~~i~~~F~~~~CpsL~g 125 (146)
T 2dko_A 62 ------DLTREEIVELMRDVS-------KE--DHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTG 125 (146)
T ss_dssp ------SCCHHHHHHHHHHHH-------HS--CCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTT
T ss_pred ------CCCHHHHHHHHHHHH-------Hh--hcCCCCeEEEEeccCCCCCEEEEeCC-cEeHHHHHHHhccccChhhcC
Confidence 568888888887211 01 11346789999999999998877777 366666655543100 00123
Q ss_pred ceEEEEecccccccc
Q 011066 211 KSLVFYLEACESGSI 225 (494)
Q Consensus 211 kklv~~iEAC~SGSm 225 (494)
|=-+|+|.||...-+
T Consensus 126 KPKlffiQACRG~~~ 140 (146)
T 2dko_A 126 KPKLFIIQACRGTEL 140 (146)
T ss_dssp SCEEEEEESCCSSBC
T ss_pred CCeEEEEECCCCCCC
Confidence 455889999987543
No 19
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=70.92 E-value=2.3 Score=38.97 Aligned_cols=120 Identities=18% Similarity=0.182 Sum_probs=80.0
Q ss_pred CCeEEEEEeccCCCC-----------cchh--hHHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCC
Q 011066 58 GTRWAVLLAGSNGFW-----------NYRH--QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGD 124 (494)
Q Consensus 58 ~~~wAVlVagS~gw~-----------NYRH--qadv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~ 124 (494)
..-+|+||.=.++-. .-|. ..|+-.+-.++++.||. |..++
T Consensus 22 ~rG~~LIinn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~--------------------- 75 (164)
T 1qtn_A 22 PRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFE-----IKPHD--------------------- 75 (164)
T ss_dssp SCCEEEEEECCCCHHHHHHCGGGTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE---------------------
T ss_pred CceEEEEEechhcCCccccccccccCcCCCCcHHHHHHHHHHHHHCCCE-----EEEec---------------------
Confidence 467999997765532 2333 36788999999999984 33333
Q ss_pred CccCCccccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHH
Q 011066 125 DVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKK 204 (494)
Q Consensus 125 dvY~gv~iDY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m 204 (494)
++|.+.+..+|+-- . .+ +-...|-+++++.+||..|.|.-.|+..+.-++|.+.|..-
T Consensus 76 -------------dlt~~em~~~l~~~-~------~~--dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~i~~i~~~F~~~ 133 (164)
T 1qtn_A 76 -------------DCTVEQIYEILKIY-Q------LM--DHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGL 133 (164)
T ss_dssp -------------SCCHHHHHHHHHHH-H------HS--CCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTT
T ss_pred -------------CCCHHHHHHHHHHH-H------Hh--hccCCCEEEEEeCCCCCCCEEEeeCCCEeeHHHHHHHhccc
Confidence 56888888888731 1 01 11346788999999999998888787657767777665431
Q ss_pred H-HcCCCceEEEEecccccccc
Q 011066 205 H-ASGNYKSLVFYLEACESGSI 225 (494)
Q Consensus 205 ~-~~~~Ykklv~~iEAC~SGSm 225 (494)
. ..-.=|=-+|+|.||...-.
T Consensus 134 ~CpsL~gKPKlFfiQACRG~~~ 155 (164)
T 1qtn_A 134 KCPSLAGKPKVFFIQACQGDNY 155 (164)
T ss_dssp TCGGGTTSCEEEEEESCSSSBC
T ss_pred cChhhcCCCeEEEEECCCCCCc
Confidence 0 00122445889999987543
No 20
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=63.86 E-value=11 Score=37.14 Aligned_cols=110 Identities=6% Similarity=0.020 Sum_probs=71.5
Q ss_pred CCeEEEEEeccCCCCcchhhHHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCccccCCCC
Q 011066 58 GTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGE 137 (494)
Q Consensus 58 ~~~wAVlVagS~gw~NYRHqadv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~iDY~g~ 137 (494)
..-.||||.=.. .|+-.+-.++++.||. |..++
T Consensus 42 ~rG~~LIinn~~--------~D~~~L~~~f~~LgF~-----V~~~~---------------------------------- 74 (272)
T 3h11_A 42 PLGICLIIDCIG--------NETELLRDTFTSLGYE-----VQKFL---------------------------------- 74 (272)
T ss_dssp SSEEEEEEESSC--------CCCSHHHHHHHHHTEE-----EEEEE----------------------------------
T ss_pred cceEEEEECCch--------HHHHHHHHHHHHCCCE-----EEEee----------------------------------
Confidence 466889888532 4777788888888884 33333
Q ss_pred CCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCC--CcCHHHHHHHHHHHH-HcCCCceEE
Q 011066 138 DVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSR--YIYADELIDVLKKKH-ASGNYKSLV 214 (494)
Q Consensus 138 ~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~--~L~a~dL~~~L~~m~-~~~~Ykklv 214 (494)
++|.+.+..+|.--.. + .+-...|-+++++.+||..|.|.=-|+. .+.-++|.+.|..-+ ..-.=|=-+
T Consensus 75 dlt~~em~~~l~~~~~-------~-~dh~~~d~~v~~ilSHG~~g~i~g~D~~~~~v~l~~i~~~f~~~~CpsL~gKPKl 146 (272)
T 3h11_A 75 HLSMHGISQILGQFAC-------M-PEHRDYDSFVCVLVSRGGSQSVYGVDQTHSGLPLHHIRRMFMGDSCPYLAGKPKM 146 (272)
T ss_dssp SCBHHHHHHHHHHHHT-------C-GGGGGCSEEEEEEEEEEETTEECBTSCCSSCEEHHHHHHHHSTTTCGGGTTSCEE
T ss_pred CCCHHHHHHHHHHHHh-------c-cccCCCCEEEEEEEcCCCCCeEEEEcCCcceEeHHHHHHHhccccChhhcCCCcE
Confidence 5688999998883110 0 1124578899999999999977665664 356666666554210 001234568
Q ss_pred EEeccccc
Q 011066 215 FYLEACES 222 (494)
Q Consensus 215 ~~iEAC~S 222 (494)
|+|.||..
T Consensus 147 ffiQACRG 154 (272)
T 3h11_A 147 FFIQNYVV 154 (272)
T ss_dssp EEEEEEEC
T ss_pred EEEECCCC
Confidence 99999985
No 21
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=54.33 E-value=5.9 Score=36.91 Aligned_cols=120 Identities=18% Similarity=0.236 Sum_probs=78.6
Q ss_pred CCeEEEEEeccCCCC----cchhh--HHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcc
Q 011066 58 GTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (494)
Q Consensus 58 ~~~wAVlVagS~gw~----NYRHq--adv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~ 131 (494)
....|+||.=.++.. ..|.- .|+-.+-.++++.||. |..++
T Consensus 43 ~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LGF~-----V~~~~---------------------------- 89 (179)
T 3p45_A 43 RRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFE-----VKCFN---------------------------- 89 (179)
T ss_dssp BCCEEEEEECCSCCGGGCCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE----------------------------
T ss_pred ccCEEEEEeCcccCCCCCCCCCCCCHHHHHHHHHHHHHCCCE-----EEEEe----------------------------
Confidence 567899999887653 34444 5788999999999994 33333
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCCC
Q 011066 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (494)
Q Consensus 132 iDY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~Y 210 (494)
++|.+.+..+|.-- . .+ +-...|-+++++..||..|.|.--|+. +.-++|.+.|.--+ ..-.=
T Consensus 90 ------dlt~~em~~~l~~~-~------~~--dh~~~dc~vvvilSHG~~g~I~g~D~~-v~l~~I~~~F~~~~CpsL~g 153 (179)
T 3p45_A 90 ------DLKAEELLLKIHEV-S------TV--SHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLVG 153 (179)
T ss_dssp ------SCCHHHHHHHHHHH-H------TS--CCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHGGGSGGGCGGGTT
T ss_pred ------CCCHHHHHHHHHHH-h------hh--hcCCCCEEEEEEeccCCCCEEEEECCE-EEHHHHHHhcccccChhhCC
Confidence 56889999988831 1 11 123568899999999999988877876 66677666654210 01123
Q ss_pred ceEEEEeccccccccc
Q 011066 211 KSLVFYLEACESGSIF 226 (494)
Q Consensus 211 kklv~~iEAC~SGSmf 226 (494)
|=.+|+|.||...-.=
T Consensus 154 KPKlFfIQACRG~~~d 169 (179)
T 3p45_A 154 KPKIFIIQACRGNQHD 169 (179)
T ss_dssp SCEEEEEECC------
T ss_pred CCcEEEEECCCCCCCC
Confidence 4568899999986543
No 22
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=50.45 E-value=5.9 Score=36.66 Aligned_cols=118 Identities=14% Similarity=0.206 Sum_probs=76.8
Q ss_pred CCeEEEEEeccCCCC----cchhh--HHHHHHHHHHHhCCCCCCCEEEEeccccccCCCCCCCCeEeeCCCCCCccCCcc
Q 011066 58 GTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (494)
Q Consensus 58 ~~~wAVlVagS~gw~----NYRHq--adv~~~Yq~L~~~Gi~denIIlmm~DDia~n~~Np~pG~i~n~~~g~dvY~gv~ 131 (494)
..-.|+||.=.++-. .-|.- .|+-.+.+++++.|+. |..++
T Consensus 43 ~rG~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LgF~-----V~v~~---------------------------- 89 (173)
T 2ql9_A 43 KLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFD-----VIVYN---------------------------- 89 (173)
T ss_dssp EEEEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHHTEE-----EEEEE----------------------------
T ss_pred CceEEEEEeccccCCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEe----------------------------
Confidence 456899998776543 23555 6788999999999983 23233
Q ss_pred ccCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCCC
Q 011066 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (494)
Q Consensus 132 iDY~g~~Vt~~nfl~VL~G~~~~~~~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~Y 210 (494)
++|.+.+..+|.-- . .+ +-...|-+++++.+||..|.|.-.|+. +.-++|...|.--. ..-.=
T Consensus 90 ------dlt~~em~~~l~~~-s------~~--dh~~~dc~vvvilSHG~~g~I~g~D~~-~~i~~I~~~F~~~~CpsL~g 153 (173)
T 2ql9_A 90 ------DCSCAKMQDLLKKA-S------EE--DHTNAACFACILLSHGEENVIYGKDGV-TPIKDLTAHFRGDRCKTLLE 153 (173)
T ss_dssp ------SCCHHHHHHHHHHH-H------TS--CCTTEEEEEEEEESCEETTEEEETTEE-EEHHHHHGGGSTTTCGGGTT
T ss_pred ------CCCHHHHHHHHHHH-H------Hh--hccCCCeEEEeecCCCCCCEEEEcCCc-EEHHHHHHHcCcccChhHcC
Confidence 56888888888731 1 11 113467789999999999988777774 55555554442100 00123
Q ss_pred ceEEEEeccccccc
Q 011066 211 KSLVFYLEACESGS 224 (494)
Q Consensus 211 kklv~~iEAC~SGS 224 (494)
|=-+|+|.||...-
T Consensus 154 KPKlFfIQACRG~~ 167 (173)
T 2ql9_A 154 KPKLFFIQACRGTE 167 (173)
T ss_dssp SCEEEEEESCCSSB
T ss_pred CCeEEEEECCCCCC
Confidence 45688899998754
Done!